##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM181568v1 #!genome-build-accession NCBI_Assembly:GCA_001815685.1 #!annotation-date 03/03/2016 05:50:04 #!annotation-source NCBI ##sequence-region KV821569.1 1 1133 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821569.1 Genbank region 1 1133 . + . ID=KV821569.1:1..1133;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821569.1 Genbank pseudogene 1 190 . - . ID=gene-HMPREF3052_00005;Name=HMPREF3052_00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00005;pseudo=true GCA_001815685.1|KV821569.1 GeneMarkS+ CDS 1 190 . - 0 ID=cds-HMPREF3052_00005;Parent=gene-HMPREF3052_00005;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00005;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821569.1 Genbank gene 203 526 . - . ID=gene-HMPREF3052_00010;Name=HMPREF3052_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00010 GCA_001815685.1|KV821569.1 Protein Homology CDS 203 526 . - 0 ID=cds-OFO30407.1;Parent=gene-HMPREF3052_00010;Dbxref=NCBI_GP:OFO30407.1;Name=OFO30407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762059.1;locus_tag=HMPREF3052_00010;product=hypothetical protein;protein_id=OFO30407.1;transl_table=11 GCA_001815685.1|KV821569.1 Genbank gene 608 1093 . - . ID=gene-HMPREF3052_00015;Name=HMPREF3052_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00015 GCA_001815685.1|KV821569.1 GeneMarkS+ CDS 608 1093 . - 0 ID=cds-OFO30408.1;Parent=gene-HMPREF3052_00015;Dbxref=NCBI_GP:OFO30408.1;Name=OFO30408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00015;product=hypothetical protein;protein_id=OFO30408.1;transl_table=11 ##sequence-region KV821570.1 1 8580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821570.1 Genbank region 1 8580 . + . ID=KV821570.1:1..8580;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821570.1 Genbank pseudogene 1 485 . + . ID=gene-HMPREF3052_00020;Name=HMPREF3052_00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00020;pseudo=true GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 1 485 . + 2 ID=cds-HMPREF3052_00020;Parent=gene-HMPREF3052_00020;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00020;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 488 1798 . + . ID=gene-HMPREF3052_00025;Name=HMPREF3052_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00025 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 488 1798 . + 0 ID=cds-OFO30306.1;Parent=gene-HMPREF3052_00025;Dbxref=NCBI_GP:OFO30306.1;Name=OFO30306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00025;product=hypothetical protein;protein_id=OFO30306.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 1810 2055 . + . ID=gene-HMPREF3052_00030;Name=HMPREF3052_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00030 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 1810 2055 . + 0 ID=cds-OFO30307.1;Parent=gene-HMPREF3052_00030;Dbxref=NCBI_GP:OFO30307.1;Name=OFO30307.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00030;product=hypothetical protein;protein_id=OFO30307.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 2058 2516 . + . ID=gene-HMPREF3052_00035;Name=HMPREF3052_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00035 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 2058 2516 . + 0 ID=cds-OFO30308.1;Parent=gene-HMPREF3052_00035;Dbxref=NCBI_GP:OFO30308.1;Name=OFO30308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00035;product=hypothetical protein;protein_id=OFO30308.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 2631 3227 . + . ID=gene-HMPREF3052_00040;Name=HMPREF3052_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00040 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 2631 3227 . + 0 ID=cds-OFO30309.1;Parent=gene-HMPREF3052_00040;Dbxref=NCBI_GP:OFO30309.1;Name=OFO30309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00040;product=hypothetical protein;protein_id=OFO30309.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 3328 3708 . + . ID=gene-HMPREF3052_00045;Name=HMPREF3052_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00045 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 3328 3708 . + 0 ID=cds-OFO30310.1;Parent=gene-HMPREF3052_00045;Dbxref=NCBI_GP:OFO30310.1;Name=OFO30310.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00045;product=hypothetical protein;protein_id=OFO30310.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 3701 3916 . + . ID=gene-HMPREF3052_00050;Name=HMPREF3052_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00050 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 3701 3916 . + 0 ID=cds-OFO30311.1;Parent=gene-HMPREF3052_00050;Dbxref=NCBI_GP:OFO30311.1;Name=OFO30311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00050;product=hypothetical protein;protein_id=OFO30311.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 4045 4341 . + . ID=gene-HMPREF3052_00055;Name=HMPREF3052_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00055 GCA_001815685.1|KV821570.1 Protein Homology CDS 4045 4341 . + 0 ID=cds-OFO30312.1;Parent=gene-HMPREF3052_00055;Dbxref=NCBI_GP:OFO30312.1;Name=OFO30312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238705.1;locus_tag=HMPREF3052_00055;product=hypothetical protein;protein_id=OFO30312.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 4329 4730 . + . ID=gene-HMPREF3052_00060;Name=HMPREF3052_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00060 GCA_001815685.1|KV821570.1 Protein Homology CDS 4329 4730 . + 0 ID=cds-OFO30313.1;Parent=gene-HMPREF3052_00060;Dbxref=NCBI_GP:OFO30313.1;Name=OFO30313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212389.1;locus_tag=HMPREF3052_00060;product=hypothetical protein;protein_id=OFO30313.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 4731 5069 . + . ID=gene-HMPREF3052_00065;Name=HMPREF3052_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00065 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 4731 5069 . + 0 ID=cds-OFO30314.1;Parent=gene-HMPREF3052_00065;Dbxref=NCBI_GP:OFO30314.1;Name=OFO30314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00065;product=hypothetical protein;protein_id=OFO30314.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 5090 5581 . + . ID=gene-HMPREF3052_00070;Name=HMPREF3052_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00070 GCA_001815685.1|KV821570.1 Protein Homology CDS 5090 5581 . + 0 ID=cds-OFO30315.1;Parent=gene-HMPREF3052_00070;Dbxref=NCBI_GP:OFO30315.1;Name=OFO30315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212388.1;locus_tag=HMPREF3052_00070;product=hypothetical protein;protein_id=OFO30315.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 5613 6041 . + . ID=gene-HMPREF3052_00075;Name=HMPREF3052_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00075 GCA_001815685.1|KV821570.1 GeneMarkS+ CDS 5613 6041 . + 0 ID=cds-OFO30316.1;Parent=gene-HMPREF3052_00075;Dbxref=NCBI_GP:OFO30316.1;Name=OFO30316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00075;product=hypothetical protein;protein_id=OFO30316.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 6528 7229 . + . ID=gene-HMPREF3052_00080;Name=HMPREF3052_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00080 GCA_001815685.1|KV821570.1 Protein Homology CDS 6528 7229 . + 0 ID=cds-OFO30317.1;Parent=gene-HMPREF3052_00080;Dbxref=NCBI_GP:OFO30317.1;Name=OFO30317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212386.1;locus_tag=HMPREF3052_00080;product=phosphoadenosine phosphosulfate reductase;protein_id=OFO30317.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 7216 7635 . + . ID=gene-HMPREF3052_00085;Name=HMPREF3052_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00085 GCA_001815685.1|KV821570.1 Protein Homology CDS 7216 7635 . + 0 ID=cds-OFO30318.1;Parent=gene-HMPREF3052_00085;Dbxref=NCBI_GP:OFO30318.1;Name=OFO30318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580656.1;locus_tag=HMPREF3052_00085;product=hypothetical protein;protein_id=OFO30318.1;transl_table=11 GCA_001815685.1|KV821570.1 Genbank gene 7860 8465 . + . ID=gene-HMPREF3052_00090;Name=HMPREF3052_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00090 GCA_001815685.1|KV821570.1 Protein Homology CDS 7860 8465 . + 0 ID=cds-OFO30319.1;Parent=gene-HMPREF3052_00090;Dbxref=NCBI_GP:OFO30319.1;Name=OFO30319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212384.1;locus_tag=HMPREF3052_00090;product=hypothetical protein;protein_id=OFO30319.1;transl_table=11 ##sequence-region KV821571.1 1 551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821571.1 Genbank region 1 551 . + . ID=KV821571.1:1..551;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821571.1 Genbank gene 114 551 . - . ID=gene-HMPREF3052_00095;Name=HMPREF3052_00095;end_range=551,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00095;partial=true GCA_001815685.1|KV821571.1 Protein Homology CDS 114 551 . - 0 ID=cds-OFO29427.1;Parent=gene-HMPREF3052_00095;Dbxref=NCBI_GP:OFO29427.1;Name=OFO29427.1;end_range=551,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520164.1;locus_tag=HMPREF3052_00095;partial=true;product=prepilin cleavage protein;protein_id=OFO29427.1;transl_table=11 ##sequence-region KV821572.1 1 6321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821572.1 Genbank region 1 6321 . + . ID=KV821572.1:1..6321;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821572.1 Genbank gene 125 412 . - . ID=gene-HMPREF3052_00100;Name=HMPREF3052_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00100 GCA_001815685.1|KV821572.1 Protein Homology CDS 125 412 . - 0 ID=cds-OFO28575.1;Parent=gene-HMPREF3052_00100;Dbxref=NCBI_GP:OFO28575.1;Name=OFO28575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747589.1;locus_tag=HMPREF3052_00100;product=topoisomerase;protein_id=OFO28575.1;transl_table=11 GCA_001815685.1|KV821572.1 Genbank gene 787 900 . - . ID=gene-HMPREF3052_00105;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF3052_00105 GCA_001815685.1|KV821572.1 cmsearch rRNA 787 900 . - . ID=rna-HMPREF3052_00105;Parent=gene-HMPREF3052_00105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_00105;product=5S ribosomal RNA GCA_001815685.1|KV821572.1 cmsearch exon 787 900 . - . ID=exon-HMPREF3052_00105-1;Parent=rna-HMPREF3052_00105;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_00105;product=5S ribosomal RNA GCA_001815685.1|KV821572.1 Genbank gene 993 3890 . - . ID=gene-HMPREF3052_00110;Name=HMPREF3052_00110;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF3052_00110 GCA_001815685.1|KV821572.1 Genbank rRNA 993 3890 . - . ID=rna-HMPREF3052_00110;Parent=gene-HMPREF3052_00110;gbkey=rRNA;locus_tag=HMPREF3052_00110;product=23S ribosomal RNA GCA_001815685.1|KV821572.1 Genbank exon 993 3890 . - . ID=exon-HMPREF3052_00110-1;Parent=rna-HMPREF3052_00110;gbkey=rRNA;locus_tag=HMPREF3052_00110;product=23S ribosomal RNA GCA_001815685.1|KV821572.1 Genbank gene 4235 4310 . - . ID=gene-HMPREF3052_00115;Name=HMPREF3052_00115;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_00115 GCA_001815685.1|KV821572.1 tRNAscan-SE tRNA 4235 4310 . - . ID=rna-HMPREF3052_00115;Parent=gene-HMPREF3052_00115;anticodon=(pos:complement(4275..4277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00115;product=tRNA-Ala GCA_001815685.1|KV821572.1 tRNAscan-SE exon 4235 4310 . - . ID=exon-HMPREF3052_00115-1;Parent=rna-HMPREF3052_00115;anticodon=(pos:complement(4275..4277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00115;product=tRNA-Ala GCA_001815685.1|KV821572.1 Genbank gene 4316 4392 . - . ID=gene-HMPREF3052_00120;Name=HMPREF3052_00120;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_00120 GCA_001815685.1|KV821572.1 tRNAscan-SE tRNA 4316 4392 . - . ID=rna-HMPREF3052_00120;Parent=gene-HMPREF3052_00120;anticodon=(pos:complement(4356..4358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00120;product=tRNA-Ile GCA_001815685.1|KV821572.1 tRNAscan-SE exon 4316 4392 . - . ID=exon-HMPREF3052_00120-1;Parent=rna-HMPREF3052_00120;anticodon=(pos:complement(4356..4358));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00120;product=tRNA-Ile GCA_001815685.1|KV821572.1 Genbank gene 4495 6045 . - . ID=gene-HMPREF3052_00125;Name=HMPREF3052_00125;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF3052_00125 GCA_001815685.1|KV821572.1 Genbank rRNA 4495 6045 . - . ID=rna-HMPREF3052_00125;Parent=gene-HMPREF3052_00125;gbkey=rRNA;locus_tag=HMPREF3052_00125;product=16S ribosomal RNA GCA_001815685.1|KV821572.1 Genbank exon 4495 6045 . - . ID=exon-HMPREF3052_00125-1;Parent=rna-HMPREF3052_00125;gbkey=rRNA;locus_tag=HMPREF3052_00125;product=16S ribosomal RNA ##sequence-region KV821573.1 1 18557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821573.1 Genbank region 1 18557 . + . ID=KV821573.1:1..18557;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821573.1 Genbank gene 56 277 . + . ID=gene-HMPREF3052_00130;Name=HMPREF3052_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00130 GCA_001815685.1|KV821573.1 GeneMarkS+ CDS 56 277 . + 0 ID=cds-OFO26088.1;Parent=gene-HMPREF3052_00130;Dbxref=NCBI_GP:OFO26088.1;Name=OFO26088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00130;product=hypothetical protein;protein_id=OFO26088.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 645 2087 . + . ID=gene-HMPREF3052_00135;Name=HMPREF3052_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00135 GCA_001815685.1|KV821573.1 Protein Homology CDS 645 2087 . + 0 ID=cds-OFO26089.1;Parent=gene-HMPREF3052_00135;Dbxref=NCBI_GP:OFO26089.1;Name=OFO26089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220127.1;locus_tag=HMPREF3052_00135;product=hypothetical protein;protein_id=OFO26089.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 2088 2276 . - . ID=gene-HMPREF3052_00140;Name=HMPREF3052_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00140 GCA_001815685.1|KV821573.1 GeneMarkS+ CDS 2088 2276 . - 0 ID=cds-OFO26090.1;Parent=gene-HMPREF3052_00140;Dbxref=NCBI_GP:OFO26090.1;Name=OFO26090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00140;product=hypothetical protein;protein_id=OFO26090.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 2275 3489 . + . ID=gene-HMPREF3052_00145;Name=HMPREF3052_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00145 GCA_001815685.1|KV821573.1 Protein Homology CDS 2275 3489 . + 0 ID=cds-OFO26091.1;Parent=gene-HMPREF3052_00145;Dbxref=NCBI_GP:OFO26091.1;Name=OFO26091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754352.1;locus_tag=HMPREF3052_00145;product=sodium/glutamate symporter;protein_id=OFO26091.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 3595 4617 . + . ID=gene-HMPREF3052_00150;Name=HMPREF3052_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00150 GCA_001815685.1|KV821573.1 Protein Homology CDS 3595 4617 . + 0 ID=cds-OFO26092.1;Parent=gene-HMPREF3052_00150;Dbxref=NCBI_GP:OFO26092.1;Name=OFO26092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747955.1;locus_tag=HMPREF3052_00150;product=hypothetical protein;protein_id=OFO26092.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 4672 5667 . + . ID=gene-HMPREF3052_00155;Name=HMPREF3052_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00155 GCA_001815685.1|KV821573.1 Protein Homology CDS 4672 5667 . + 0 ID=cds-OFO26093.1;Parent=gene-HMPREF3052_00155;Dbxref=NCBI_GP:OFO26093.1;Name=OFO26093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519091.1;locus_tag=HMPREF3052_00155;product=protease;protein_id=OFO26093.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 5858 6862 . - . ID=gene-HMPREF3052_00160;Name=HMPREF3052_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00160 GCA_001815685.1|KV821573.1 Protein Homology CDS 5858 6862 . - 0 ID=cds-OFO26094.1;Parent=gene-HMPREF3052_00160;Dbxref=NCBI_GP:OFO26094.1;Name=OFO26094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681761.1;locus_tag=HMPREF3052_00160;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=OFO26094.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 7020 7373 . - . ID=gene-HMPREF3052_00165;Name=HMPREF3052_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00165 GCA_001815685.1|KV821573.1 Protein Homology CDS 7020 7373 . - 0 ID=cds-OFO26106.1;Parent=gene-HMPREF3052_00165;Dbxref=NCBI_GP:OFO26106.1;Name=OFO26106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217778.1;locus_tag=HMPREF3052_00165;product=cytochrome B;protein_id=OFO26106.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 7547 7729 . - . ID=gene-HMPREF3052_00170;Name=HMPREF3052_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00170 GCA_001815685.1|KV821573.1 Protein Homology CDS 7547 7729 . - 0 ID=cds-OFO26095.1;Parent=gene-HMPREF3052_00170;Dbxref=NCBI_GP:OFO26095.1;Name=OFO26095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683920.1;locus_tag=HMPREF3052_00170;product=purine catabolism protein PucB;protein_id=OFO26095.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 7784 9313 . + . ID=gene-HMPREF3052_00175;Name=HMPREF3052_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00175 GCA_001815685.1|KV821573.1 Protein Homology CDS 7784 9313 . + 0 ID=cds-OFO26096.1;Parent=gene-HMPREF3052_00175;Dbxref=NCBI_GP:OFO26096.1;Name=OFO26096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519095.1;locus_tag=HMPREF3052_00175;product=ABC transporter permease;protein_id=OFO26096.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 9428 9991 . + . ID=gene-HMPREF3052_00180;Name=HMPREF3052_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00180 GCA_001815685.1|KV821573.1 Protein Homology CDS 9428 9991 . + 0 ID=cds-OFO26097.1;Parent=gene-HMPREF3052_00180;Dbxref=NCBI_GP:OFO26097.1;Name=OFO26097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681752.1;locus_tag=HMPREF3052_00180;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=OFO26097.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 10050 10478 . + . ID=gene-HMPREF3052_00185;Name=HMPREF3052_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00185 GCA_001815685.1|KV821573.1 Protein Homology CDS 10050 10478 . + 0 ID=cds-OFO26098.1;Parent=gene-HMPREF3052_00185;Dbxref=NCBI_GP:OFO26098.1;Name=OFO26098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681750.1;locus_tag=HMPREF3052_00185;product=PTS mannose transporter subunit IIA;protein_id=OFO26098.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 10523 10792 . + . ID=gene-HMPREF3052_00190;Name=HMPREF3052_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00190 GCA_001815685.1|KV821573.1 Protein Homology CDS 10523 10792 . + 0 ID=cds-OFO26099.1;Parent=gene-HMPREF3052_00190;Dbxref=NCBI_GP:OFO26099.1;Name=OFO26099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174431.1;locus_tag=HMPREF3052_00190;product=phosphocarrier protein HPr;protein_id=OFO26099.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 10792 12555 . + . ID=gene-HMPREF3052_00195;Name=HMPREF3052_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00195 GCA_001815685.1|KV821573.1 Protein Homology CDS 10792 12555 . + 0 ID=cds-OFO26100.1;Parent=gene-HMPREF3052_00195;Dbxref=NCBI_GP:OFO26100.1;Name=OFO26100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747937.1;locus_tag=HMPREF3052_00195;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=OFO26100.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 13061 14176 . + . ID=gene-HMPREF3052_00200;Name=HMPREF3052_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00200 GCA_001815685.1|KV821573.1 Protein Homology CDS 13061 14176 . + 0 ID=cds-OFO26101.1;Parent=gene-HMPREF3052_00200;Dbxref=NCBI_GP:OFO26101.1;Name=OFO26101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687219.1;locus_tag=HMPREF3052_00200;product=iron ABC transporter substrate-binding protein;protein_id=OFO26101.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 14701 15747 . + . ID=gene-HMPREF3052_00205;Name=HMPREF3052_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00205 GCA_001815685.1|KV821573.1 Protein Homology CDS 14701 15747 . + 0 ID=cds-OFO26102.1;Parent=gene-HMPREF3052_00205;Dbxref=NCBI_GP:OFO26102.1;Name=OFO26102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312537.1;locus_tag=HMPREF3052_00205;product=iron ABC transporter permease;protein_id=OFO26102.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 15758 16525 . + . ID=gene-HMPREF3052_00210;Name=HMPREF3052_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00210 GCA_001815685.1|KV821573.1 Protein Homology CDS 15758 16525 . + 0 ID=cds-OFO26103.1;Parent=gene-HMPREF3052_00210;Dbxref=NCBI_GP:OFO26103.1;Name=OFO26103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681737.1;locus_tag=HMPREF3052_00210;product=peptide ABC transporter substrate-binding protein;protein_id=OFO26103.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 16705 17136 . + . ID=gene-HMPREF3052_00215;Name=HMPREF3052_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00215 GCA_001815685.1|KV821573.1 Protein Homology CDS 16705 17136 . + 0 ID=cds-OFO26104.1;Parent=gene-HMPREF3052_00215;Dbxref=NCBI_GP:OFO26104.1;Name=OFO26104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747929.1;locus_tag=HMPREF3052_00215;product=pseudoazurin;protein_id=OFO26104.1;transl_table=11 GCA_001815685.1|KV821573.1 Genbank gene 17275 18540 . + . ID=gene-HMPREF3052_00220;Name=HMPREF3052_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00220 GCA_001815685.1|KV821573.1 Protein Homology CDS 17275 18540 . + 0 ID=cds-OFO26105.1;Parent=gene-HMPREF3052_00220;Dbxref=NCBI_GP:OFO26105.1;Name=OFO26105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683901.1;locus_tag=HMPREF3052_00220;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=OFO26105.1;transl_table=11 ##sequence-region KV821574.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821574.1 Genbank region 1 804 . + . ID=KV821574.1:1..804;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821574.1 Genbank pseudogene 1 430 . + . ID=gene-HMPREF3052_00225;Name=HMPREF3052_00225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00225;pseudo=true GCA_001815685.1|KV821574.1 Protein Homology CDS 1 430 . + 1 ID=cds-HMPREF3052_00225;Parent=gene-HMPREF3052_00225;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686493.1;locus_tag=HMPREF3052_00225;product=zonular occludens toxin;pseudo=true;transl_table=11 GCA_001815685.1|KV821574.1 Genbank gene 474 695 . - . ID=gene-HMPREF3052_00230;Name=HMPREF3052_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00230 GCA_001815685.1|KV821574.1 GeneMarkS+ CDS 474 695 . - 0 ID=cds-OFO24878.1;Parent=gene-HMPREF3052_00230;Dbxref=NCBI_GP:OFO24878.1;Name=OFO24878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00230;product=hypothetical protein;protein_id=OFO24878.1;transl_table=11 ##sequence-region KV821575.1 1 24616 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821575.1 Genbank region 1 24616 . + . ID=KV821575.1:1..24616;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821575.1 Genbank gene 264 881 . - . ID=gene-HMPREF3052_00235;Name=HMPREF3052_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00235 GCA_001815685.1|KV821575.1 Protein Homology CDS 264 881 . - 0 ID=cds-OFO29409.1;Parent=gene-HMPREF3052_00235;Dbxref=NCBI_GP:OFO29409.1;Name=OFO29409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520546.1;locus_tag=HMPREF3052_00235;product=nucleoside-diphosphate sugar epimerase;protein_id=OFO29409.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 974 2794 . - . ID=gene-HMPREF3052_00240;Name=HMPREF3052_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00240 GCA_001815685.1|KV821575.1 Protein Homology CDS 974 2794 . - 0 ID=cds-OFO29410.1;Parent=gene-HMPREF3052_00240;Dbxref=NCBI_GP:OFO29410.1;Name=OFO29410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680368.1;locus_tag=HMPREF3052_00240;product=putative heme utilization radical SAM enzyme HutW;protein_id=OFO29410.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 3069 3794 . - . ID=gene-HMPREF3052_00245;Name=HMPREF3052_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00245 GCA_001815685.1|KV821575.1 Protein Homology CDS 3069 3794 . - 0 ID=cds-OFO29411.1;Parent=gene-HMPREF3052_00245;Dbxref=NCBI_GP:OFO29411.1;Name=OFO29411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686360.1;locus_tag=HMPREF3052_00245;product=ferrichrome ABC transporter ATP-binding protein;protein_id=OFO29411.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 3841 4782 . - . ID=gene-HMPREF3052_00250;Name=HMPREF3052_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00250 GCA_001815685.1|KV821575.1 Protein Homology CDS 3841 4782 . - 0 ID=cds-OFO29412.1;Parent=gene-HMPREF3052_00250;Dbxref=NCBI_GP:OFO29412.1;Name=OFO29412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746703.1;locus_tag=HMPREF3052_00250;product=ABC transporter permease;protein_id=OFO29412.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 4925 5716 . - . ID=gene-HMPREF3052_00255;Name=HMPREF3052_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00255 GCA_001815685.1|KV821575.1 Protein Homology CDS 4925 5716 . - 0 ID=cds-OFO29413.1;Parent=gene-HMPREF3052_00255;Dbxref=NCBI_GP:OFO29413.1;Name=OFO29413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682038.1;locus_tag=HMPREF3052_00255;product=ABC transporter substrate-binding protein;protein_id=OFO29413.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 5791 7989 . - . ID=gene-HMPREF3052_00260;Name=HMPREF3052_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00260 GCA_001815685.1|KV821575.1 Protein Homology CDS 5791 7989 . - 0 ID=cds-OFO29414.1;Parent=gene-HMPREF3052_00260;Dbxref=NCBI_GP:OFO29414.1;Name=OFO29414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686325.1;locus_tag=HMPREF3052_00260;product=TonB-dependent receptor;protein_id=OFO29414.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 8301 9152 . - . ID=gene-HMPREF3052_00265;Name=HMPREF3052_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00265 GCA_001815685.1|KV821575.1 Protein Homology CDS 8301 9152 . - 0 ID=cds-OFO29415.1;Parent=gene-HMPREF3052_00265;Dbxref=NCBI_GP:OFO29415.1;Name=OFO29415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823631.1;locus_tag=HMPREF3052_00265;product=hypothetical protein;protein_id=OFO29415.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 9250 10236 . + . ID=gene-HMPREF3052_00270;Name=HMPREF3052_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00270 GCA_001815685.1|KV821575.1 Protein Homology CDS 9250 10236 . + 0 ID=cds-OFO29416.1;Parent=gene-HMPREF3052_00270;Dbxref=NCBI_GP:OFO29416.1;Name=OFO29416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678479.1;locus_tag=HMPREF3052_00270;product=AraC family transcriptional regulator;protein_id=OFO29416.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank pseudogene 10869 13939 . + . ID=gene-HMPREF3052_00275;Name=HMPREF3052_00275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00275;pseudo=true GCA_001815685.1|KV821575.1 Protein Homology CDS 10869 13939 . + 0 ID=cds-HMPREF3052_00275;Parent=gene-HMPREF3052_00275;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740794.1;locus_tag=HMPREF3052_00275;product=receptor;pseudo=true;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 14159 15040 . - . ID=gene-HMPREF3052_00280;Name=HMPREF3052_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00280 GCA_001815685.1|KV821575.1 Protein Homology CDS 14159 15040 . - 0 ID=cds-OFO29417.1;Parent=gene-HMPREF3052_00280;Dbxref=NCBI_GP:OFO29417.1;Name=OFO29417.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686333.1;locus_tag=HMPREF3052_00280;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=OFO29417.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 15116 16054 . - . ID=gene-HMPREF3052_00285;Name=HMPREF3052_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00285 GCA_001815685.1|KV821575.1 Protein Homology CDS 15116 16054 . - 0 ID=cds-OFO29418.1;Parent=gene-HMPREF3052_00285;Dbxref=NCBI_GP:OFO29418.1;Name=OFO29418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222013.1;locus_tag=HMPREF3052_00285;product=hypothetical protein;protein_id=OFO29418.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 16211 17323 . + . ID=gene-HMPREF3052_00290;Name=HMPREF3052_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00290 GCA_001815685.1|KV821575.1 Protein Homology CDS 16211 17323 . + 0 ID=cds-OFO29419.1;Parent=gene-HMPREF3052_00290;Dbxref=NCBI_GP:OFO29419.1;Name=OFO29419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687379.1;locus_tag=HMPREF3052_00290;product=quinolinate synthetase;protein_id=OFO29419.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 17530 19038 . + . ID=gene-HMPREF3052_00295;Name=HMPREF3052_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00295 GCA_001815685.1|KV821575.1 Protein Homology CDS 17530 19038 . + 0 ID=cds-OFO29420.1;Parent=gene-HMPREF3052_00295;Dbxref=NCBI_GP:OFO29420.1;Name=OFO29420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218761.1;locus_tag=HMPREF3052_00295;product=L-aspartate oxidase;protein_id=OFO29420.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 19756 21072 . - . ID=gene-HMPREF3052_00300;Name=HMPREF3052_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00300 GCA_001815685.1|KV821575.1 GeneMarkS+ CDS 19756 21072 . - 0 ID=cds-OFO29421.1;Parent=gene-HMPREF3052_00300;Dbxref=NCBI_GP:OFO29421.1;Name=OFO29421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00300;product=hypothetical protein;protein_id=OFO29421.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank gene 21069 21659 . - . ID=gene-HMPREF3052_00305;Name=HMPREF3052_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00305 GCA_001815685.1|KV821575.1 Protein Homology CDS 21069 21659 . - 0 ID=cds-OFO29422.1;Parent=gene-HMPREF3052_00305;Dbxref=NCBI_GP:OFO29422.1;Name=OFO29422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746731.1;locus_tag=HMPREF3052_00305;product=hypothetical protein;protein_id=OFO29422.1;transl_table=11 GCA_001815685.1|KV821575.1 Genbank pseudogene 22240 24186 . + . ID=gene-HMPREF3052_00310;Name=HMPREF3052_00310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00310;pseudo=true GCA_001815685.1|KV821575.1 Protein Homology CDS 22240 24186 . + 0 ID=cds-HMPREF3052_00310;Parent=gene-HMPREF3052_00310;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312671.1;locus_tag=HMPREF3052_00310;product=phosphoenolpyruvate synthase;pseudo=true;transl_table=11 GCA_001815685.1|KV821575.1 Genbank pseudogene 24278 24616 . + . ID=gene-HMPREF3052_00315;Name=HMPREF3052_00315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00315;pseudo=true GCA_001815685.1|KV821575.1 Protein Homology CDS 24278 24616 . + 0 ID=cds-HMPREF3052_00315;Parent=gene-HMPREF3052_00315;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013744915.1;locus_tag=HMPREF3052_00315;product=phosphoglycerate mutase;pseudo=true;transl_table=11 ##sequence-region KV821576.1 1 441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821576.1 Genbank region 1 441 . + . ID=KV821576.1:1..441;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821576.1 Genbank pseudogene 1 185 . - . ID=gene-HMPREF3052_00320;Name=HMPREF3052_00320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00320;pseudo=true GCA_001815685.1|KV821576.1 GeneMarkS+ CDS 1 185 . - 0 ID=cds-HMPREF3052_00320;Parent=gene-HMPREF3052_00320;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00320;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821577.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821577.1 Genbank region 1 258 . + . ID=KV821577.1:1..258;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821578.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821578.1 Genbank region 1 753 . + . ID=KV821578.1:1..753;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821578.1 Genbank pseudogene 1 721 . - . ID=gene-HMPREF3052_00325;Name=HMPREF3052_00325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00325;pseudo=true GCA_001815685.1|KV821578.1 Protein Homology CDS 1 721 . - 0 ID=cds-HMPREF3052_00325;Parent=gene-HMPREF3052_00325;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762073.1;locus_tag=HMPREF3052_00325;product=replication initiation protein;pseudo=true;transl_table=11 ##sequence-region KV821579.1 1 2338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821579.1 Genbank region 1 2338 . + . ID=KV821579.1:1..2338;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821579.1 Genbank pseudogene 1 560 . - . ID=gene-HMPREF3052_00330;Name=HMPREF3052_00330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00330;pseudo=true GCA_001815685.1|KV821579.1 GeneMarkS+ CDS 1 560 . - 0 ID=cds-HMPREF3052_00330;Parent=gene-HMPREF3052_00330;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00330;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821579.1 Genbank gene 638 940 . - . ID=gene-HMPREF3052_00335;Name=HMPREF3052_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00335 GCA_001815685.1|KV821579.1 Protein Homology CDS 638 940 . - 0 ID=cds-OFO29299.1;Parent=gene-HMPREF3052_00335;Dbxref=NCBI_GP:OFO29299.1;Name=OFO29299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762066.1;locus_tag=HMPREF3052_00335;product=hypothetical protein;protein_id=OFO29299.1;transl_table=11 GCA_001815685.1|KV821579.1 Genbank gene 955 1182 . - . ID=gene-HMPREF3052_00340;Name=HMPREF3052_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00340 GCA_001815685.1|KV821579.1 Protein Homology CDS 955 1182 . - 0 ID=cds-OFO29300.1;Parent=gene-HMPREF3052_00340;Dbxref=NCBI_GP:OFO29300.1;Name=OFO29300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762068.1;locus_tag=HMPREF3052_00340;product=hypothetical protein;protein_id=OFO29300.1;transl_table=11 GCA_001815685.1|KV821579.1 Genbank gene 1243 1560 . - . ID=gene-HMPREF3052_00345;Name=HMPREF3052_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00345 GCA_001815685.1|KV821579.1 Protein Homology CDS 1243 1560 . - 0 ID=cds-OFO29301.1;Parent=gene-HMPREF3052_00345;Dbxref=NCBI_GP:OFO29301.1;Name=OFO29301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762070.1;locus_tag=HMPREF3052_00345;product=hypothetical protein;protein_id=OFO29301.1;transl_table=11 GCA_001815685.1|KV821579.1 Genbank gene 1583 1849 . - . ID=gene-HMPREF3052_00350;Name=HMPREF3052_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00350 GCA_001815685.1|KV821579.1 GeneMarkS+ CDS 1583 1849 . - 0 ID=cds-OFO29302.1;Parent=gene-HMPREF3052_00350;Dbxref=NCBI_GP:OFO29302.1;Name=OFO29302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00350;product=hypothetical protein;protein_id=OFO29302.1;transl_table=11 GCA_001815685.1|KV821579.1 Genbank pseudogene 1842 2338 . - . ID=gene-HMPREF3052_00355;Name=HMPREF3052_00355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00355;pseudo=true GCA_001815685.1|KV821579.1 Protein Homology CDS 1842 2338 . - 2 ID=cds-HMPREF3052_00355;Parent=gene-HMPREF3052_00355;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762073.1;locus_tag=HMPREF3052_00355;product=replication initiation protein;pseudo=true;transl_table=11 ##sequence-region KV821580.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821580.1 Genbank region 1 390 . + . ID=KV821580.1:1..390;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821580.1 Genbank gene 84 305 . - . ID=gene-HMPREF3052_00360;Name=HMPREF3052_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00360 GCA_001815685.1|KV821580.1 GeneMarkS+ CDS 84 305 . - 0 ID=cds-OFO28973.1;Parent=gene-HMPREF3052_00360;Dbxref=NCBI_GP:OFO28973.1;Name=OFO28973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00360;product=hypothetical protein;protein_id=OFO28973.1;transl_table=11 ##sequence-region KV821581.1 1 221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821581.1 Genbank region 1 221 . + . ID=KV821581.1:1..221;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821581.1 Genbank pseudogene 1 221 . + . ID=gene-HMPREF3052_00365;Name=HMPREF3052_00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00365;pseudo=true GCA_001815685.1|KV821581.1 GeneMarkS+ CDS 1 221 . + 0 ID=cds-HMPREF3052_00365;Parent=gene-HMPREF3052_00365;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00365;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821582.1 1 19018 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821582.1 Genbank region 1 19018 . + . ID=KV821582.1:1..19018;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821582.1 Genbank gene 1 290 . - . ID=gene-HMPREF3052_00370;Name=HMPREF3052_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00370;partial=true;start_range=.,1 GCA_001815685.1|KV821582.1 Protein Homology CDS 1 290 . - 0 ID=cds-OFO28267.1;Parent=gene-HMPREF3052_00370;Dbxref=NCBI_GP:OFO28267.1;Name=OFO28267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693962.1;locus_tag=HMPREF3052_00370;partial=true;product=hypothetical protein;protein_id=OFO28267.1;start_range=.,1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 432 974 . - . ID=gene-HMPREF3052_00375;Name=HMPREF3052_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00375 GCA_001815685.1|KV821582.1 Protein Homology CDS 432 974 . - 0 ID=cds-OFO28252.1;Parent=gene-HMPREF3052_00375;Dbxref=NCBI_GP:OFO28252.1;Name=OFO28252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146875.1;locus_tag=HMPREF3052_00375;product=TIGR02594 family protein;protein_id=OFO28252.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 1023 1328 . - . ID=gene-HMPREF3052_00380;Name=HMPREF3052_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00380 GCA_001815685.1|KV821582.1 Protein Homology CDS 1023 1328 . - 0 ID=cds-OFO28253.1;Parent=gene-HMPREF3052_00380;Dbxref=NCBI_GP:OFO28253.1;Name=OFO28253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212363.1;locus_tag=HMPREF3052_00380;product=hypothetical protein;protein_id=OFO28253.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 1328 1813 . - . ID=gene-HMPREF3052_00385;Name=HMPREF3052_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00385 GCA_001815685.1|KV821582.1 Protein Homology CDS 1328 1813 . - 0 ID=cds-OFO28254.1;Parent=gene-HMPREF3052_00385;Dbxref=NCBI_GP:OFO28254.1;Name=OFO28254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520735.1;locus_tag=HMPREF3052_00385;product=hypothetical protein;protein_id=OFO28254.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 1908 5150 . - . ID=gene-HMPREF3052_00390;Name=HMPREF3052_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00390 GCA_001815685.1|KV821582.1 Protein Homology CDS 1908 5150 . - 0 ID=cds-OFO28268.1;Parent=gene-HMPREF3052_00390;Dbxref=NCBI_GP:OFO28268.1;Name=OFO28268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003692891.1;locus_tag=HMPREF3052_00390;product=phage tail protein;protein_id=OFO28268.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 5207 5512 . - . ID=gene-HMPREF3052_00395;Name=HMPREF3052_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00395 GCA_001815685.1|KV821582.1 Protein Homology CDS 5207 5512 . - 0 ID=cds-OFO28255.1;Parent=gene-HMPREF3052_00395;Dbxref=NCBI_GP:OFO28255.1;Name=OFO28255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680597.1;locus_tag=HMPREF3052_00395;product=hypothetical protein;protein_id=OFO28255.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank pseudogene 6012 9476 . - . ID=gene-HMPREF3052_00400;Name=HMPREF3052_00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00400;pseudo=true GCA_001815685.1|KV821582.1 Protein Homology CDS 6012 9476 . - 0 ID=cds-HMPREF3052_00400;Parent=gene-HMPREF3052_00400;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017147109.1;locus_tag=HMPREF3052_00400;product=phage tail protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 9494 9961 . - . ID=gene-HMPREF3052_00405;Name=HMPREF3052_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00405 GCA_001815685.1|KV821582.1 Protein Homology CDS 9494 9961 . - 0 ID=cds-OFO28269.1;Parent=gene-HMPREF3052_00405;Dbxref=NCBI_GP:OFO28269.1;Name=OFO28269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238687.1;locus_tag=HMPREF3052_00405;product=hypothetical protein;protein_id=OFO28269.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 9977 10843 . - . ID=gene-HMPREF3052_00410;Name=HMPREF3052_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00410 GCA_001815685.1|KV821582.1 Protein Homology CDS 9977 10843 . - 0 ID=cds-OFO28256.1;Parent=gene-HMPREF3052_00410;Dbxref=NCBI_GP:OFO28256.1;Name=OFO28256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357642.1;locus_tag=HMPREF3052_00410;product=hypothetical protein;protein_id=OFO28256.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 10840 11439 . - . ID=gene-HMPREF3052_00415;Name=HMPREF3052_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00415 GCA_001815685.1|KV821582.1 Protein Homology CDS 10840 11439 . - 0 ID=cds-OFO28257.1;Parent=gene-HMPREF3052_00415;Dbxref=NCBI_GP:OFO28257.1;Name=OFO28257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580667.1;locus_tag=HMPREF3052_00415;product=hypothetical protein;protein_id=OFO28257.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 11441 11707 . - . ID=gene-HMPREF3052_00420;Name=HMPREF3052_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00420 GCA_001815685.1|KV821582.1 Protein Homology CDS 11441 11707 . - 0 ID=cds-OFO28258.1;Parent=gene-HMPREF3052_00420;Dbxref=NCBI_GP:OFO28258.1;Name=OFO28258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212373.1;locus_tag=HMPREF3052_00420;product=hypothetical protein;protein_id=OFO28258.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 11719 12048 . - . ID=gene-HMPREF3052_00425;Name=HMPREF3052_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00425 GCA_001815685.1|KV821582.1 Protein Homology CDS 11719 12048 . - 0 ID=cds-OFO28259.1;Parent=gene-HMPREF3052_00425;Dbxref=NCBI_GP:OFO28259.1;Name=OFO28259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238691.1;locus_tag=HMPREF3052_00425;product=hypothetical protein;protein_id=OFO28259.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 12108 12881 . - . ID=gene-HMPREF3052_00430;Name=HMPREF3052_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00430 GCA_001815685.1|KV821582.1 Protein Homology CDS 12108 12881 . - 0 ID=cds-OFO28260.1;Parent=gene-HMPREF3052_00430;Dbxref=NCBI_GP:OFO28260.1;Name=OFO28260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580664.1;locus_tag=HMPREF3052_00430;product=hypothetical protein;protein_id=OFO28260.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 12905 13333 . - . ID=gene-HMPREF3052_00435;Name=HMPREF3052_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00435 GCA_001815685.1|KV821582.1 Protein Homology CDS 12905 13333 . - 0 ID=cds-OFO28261.1;Parent=gene-HMPREF3052_00435;Dbxref=NCBI_GP:OFO28261.1;Name=OFO28261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238694.1;locus_tag=HMPREF3052_00435;product=hypothetical protein;protein_id=OFO28261.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 13330 13812 . - . ID=gene-HMPREF3052_00440;Name=HMPREF3052_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00440 GCA_001815685.1|KV821582.1 Protein Homology CDS 13330 13812 . - 0 ID=cds-OFO28262.1;Parent=gene-HMPREF3052_00440;Dbxref=NCBI_GP:OFO28262.1;Name=OFO28262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003703855.1;locus_tag=HMPREF3052_00440;product=hypothetical protein;protein_id=OFO28262.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 13814 14344 . - . ID=gene-HMPREF3052_00445;Name=HMPREF3052_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00445 GCA_001815685.1|KV821582.1 Protein Homology CDS 13814 14344 . - 0 ID=cds-OFO28263.1;Parent=gene-HMPREF3052_00445;Dbxref=NCBI_GP:OFO28263.1;Name=OFO28263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003689080.1;locus_tag=HMPREF3052_00445;product=hypothetical protein;protein_id=OFO28263.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 14347 14646 . - . ID=gene-HMPREF3052_00450;Name=HMPREF3052_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00450 GCA_001815685.1|KV821582.1 Protein Homology CDS 14347 14646 . - 0 ID=cds-OFO28264.1;Parent=gene-HMPREF3052_00450;Dbxref=NCBI_GP:OFO28264.1;Name=OFO28264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238697.1;locus_tag=HMPREF3052_00450;product=hypothetical protein;protein_id=OFO28264.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 14702 16201 . - . ID=gene-HMPREF3052_00455;Name=HMPREF3052_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00455 GCA_001815685.1|KV821582.1 Protein Homology CDS 14702 16201 . - 0 ID=cds-OFO28265.1;Parent=gene-HMPREF3052_00455;Dbxref=NCBI_GP:OFO28265.1;Name=OFO28265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255690.1;locus_tag=HMPREF3052_00455;product=hypothetical protein;protein_id=OFO28265.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 16242 17378 . - . ID=gene-HMPREF3052_00460;Name=HMPREF3052_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00460 GCA_001815685.1|KV821582.1 Protein Homology CDS 16242 17378 . - 0 ID=cds-OFO28270.1;Parent=gene-HMPREF3052_00460;Dbxref=NCBI_GP:OFO28270.1;Name=OFO28270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255691.1;locus_tag=HMPREF3052_00460;product=caudovirus prohead protease;protein_id=OFO28270.1;transl_table=11 GCA_001815685.1|KV821582.1 Genbank gene 17444 19018 . - . ID=gene-HMPREF3052_00465;Name=HMPREF3052_00465;end_range=19018,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00465;partial=true GCA_001815685.1|KV821582.1 Protein Homology CDS 17444 19018 . - 0 ID=cds-OFO28266.1;Parent=gene-HMPREF3052_00465;Dbxref=NCBI_GP:OFO28266.1;Name=OFO28266.1;end_range=19018,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255692.1;locus_tag=HMPREF3052_00465;partial=true;product=phage head morphogenesis protein;protein_id=OFO28266.1;transl_table=11 ##sequence-region KV821583.1 1 9623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821583.1 Genbank region 1 9623 . + . ID=KV821583.1:1..9623;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821583.1 Genbank gene 53 1819 . - . ID=gene-HMPREF3052_00470;Name=HMPREF3052_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00470 GCA_001815685.1|KV821583.1 Protein Homology CDS 53 1819 . - 0 ID=cds-OFO28088.1;Parent=gene-HMPREF3052_00470;Dbxref=NCBI_GP:OFO28088.1;Name=OFO28088.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683904.1;locus_tag=HMPREF3052_00470;product=sulfite reductase subunit beta;protein_id=OFO28088.1;transl_table=11 GCA_001815685.1|KV821583.1 Genbank gene 1931 3709 . - . ID=gene-HMPREF3052_00475;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=HMPREF3052_00475 GCA_001815685.1|KV821583.1 Protein Homology CDS 1931 3709 . - 0 ID=cds-OFO28089.1;Parent=gene-HMPREF3052_00475;Dbxref=NCBI_GP:OFO28089.1;Name=OFO28089.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683719.1;locus_tag=HMPREF3052_00475;product=sulfite reductase subunit alpha;protein_id=OFO28089.1;transl_table=11 GCA_001815685.1|KV821583.1 Genbank gene 4050 5378 . - . ID=gene-HMPREF3052_00480;Name=HMPREF3052_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00480 GCA_001815685.1|KV821583.1 Protein Homology CDS 4050 5378 . - 0 ID=cds-OFO28090.1;Parent=gene-HMPREF3052_00480;Dbxref=NCBI_GP:OFO28090.1;Name=OFO28090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683841.1;locus_tag=HMPREF3052_00480;product=sulfate adenylyltransferase;protein_id=OFO28090.1;transl_table=11 GCA_001815685.1|KV821583.1 Genbank gene 5677 6597 . - . ID=gene-HMPREF3052_00485;Name=HMPREF3052_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00485 GCA_001815685.1|KV821583.1 Protein Homology CDS 5677 6597 . - 0 ID=cds-OFO28091.1;Parent=gene-HMPREF3052_00485;Dbxref=NCBI_GP:OFO28091.1;Name=OFO28091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683806.1;locus_tag=HMPREF3052_00485;product=sulfate adenylyltransferase small subunit;protein_id=OFO28091.1;transl_table=11 GCA_001815685.1|KV821583.1 Genbank gene 6741 7505 . - . ID=gene-HMPREF3052_00490;Name=HMPREF3052_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00490 GCA_001815685.1|KV821583.1 Protein Homology CDS 6741 7505 . - 0 ID=cds-OFO28094.1;Parent=gene-HMPREF3052_00490;Dbxref=NCBI_GP:OFO28094.1;Name=OFO28094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004142031.1;locus_tag=HMPREF3052_00490;product=phosphoadenosine phosphosulfate reductase;protein_id=OFO28094.1;transl_table=11 GCA_001815685.1|KV821583.1 Genbank gene 7532 8977 . - . ID=gene-HMPREF3052_00495;Name=HMPREF3052_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00495 GCA_001815685.1|KV821583.1 Protein Homology CDS 7532 8977 . - 0 ID=cds-OFO28092.1;Parent=gene-HMPREF3052_00495;Dbxref=NCBI_GP:OFO28092.1;Name=OFO28092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683814.1;locus_tag=HMPREF3052_00495;product=sirohydrochlorin ferrochelatase;protein_id=OFO28092.1;transl_table=11 GCA_001815685.1|KV821583.1 Genbank gene 9107 9580 . - . ID=gene-HMPREF3052_00500;Name=HMPREF3052_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00500 GCA_001815685.1|KV821583.1 GeneMarkS+ CDS 9107 9580 . - 0 ID=cds-OFO28093.1;Parent=gene-HMPREF3052_00500;Dbxref=NCBI_GP:OFO28093.1;Name=OFO28093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00500;product=hypothetical protein;protein_id=OFO28093.1;transl_table=11 ##sequence-region KV821584.1 1 21026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821584.1 Genbank region 1 21026 . + . ID=KV821584.1:1..21026;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821584.1 Genbank gene 245 910 . + . ID=gene-HMPREF3052_00505;Name=HMPREF3052_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00505 GCA_001815685.1|KV821584.1 Protein Homology CDS 245 910 . + 0 ID=cds-OFO27854.1;Parent=gene-HMPREF3052_00505;Dbxref=NCBI_GP:OFO27854.1;Name=OFO27854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749221.1;locus_tag=HMPREF3052_00505;product=hypothetical protein;protein_id=OFO27854.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 1186 2049 . + . ID=gene-HMPREF3052_00510;Name=HMPREF3052_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00510 GCA_001815685.1|KV821584.1 Protein Homology CDS 1186 2049 . + 0 ID=cds-OFO27855.1;Parent=gene-HMPREF3052_00510;Dbxref=NCBI_GP:OFO27855.1;Name=OFO27855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216212.1;locus_tag=HMPREF3052_00510;product=GNAT family N-acetyltransferase;protein_id=OFO27855.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 2264 2767 . - . ID=gene-HMPREF3052_00515;Name=HMPREF3052_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00515 GCA_001815685.1|KV821584.1 Protein Homology CDS 2264 2767 . - 0 ID=cds-OFO27856.1;Parent=gene-HMPREF3052_00515;Dbxref=NCBI_GP:OFO27856.1;Name=OFO27856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684697.1;locus_tag=HMPREF3052_00515;product=hypothetical protein;protein_id=OFO27856.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 2981 4453 . + . ID=gene-HMPREF3052_00520;Name=HMPREF3052_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00520 GCA_001815685.1|KV821584.1 Protein Homology CDS 2981 4453 . + 0 ID=cds-OFO27857.1;Parent=gene-HMPREF3052_00520;Dbxref=NCBI_GP:OFO27857.1;Name=OFO27857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218534.1;locus_tag=HMPREF3052_00520;product=pyruvate kinase;protein_id=OFO27857.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 4653 6068 . + . ID=gene-HMPREF3052_00525;Name=HMPREF3052_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00525 GCA_001815685.1|KV821584.1 Protein Homology CDS 4653 6068 . + 0 ID=cds-OFO27858.1;Parent=gene-HMPREF3052_00525;Dbxref=NCBI_GP:OFO27858.1;Name=OFO27858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749227.1;locus_tag=HMPREF3052_00525;product=hypothetical protein;protein_id=OFO27858.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 6381 7580 . - . ID=gene-HMPREF3052_00530;Name=HMPREF3052_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00530 GCA_001815685.1|KV821584.1 Protein Homology CDS 6381 7580 . - 0 ID=cds-OFO27859.1;Parent=gene-HMPREF3052_00530;Dbxref=NCBI_GP:OFO27859.1;Name=OFO27859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686234.1;locus_tag=HMPREF3052_00530;product=peptidoglycan-binding protein LysM;protein_id=OFO27859.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 7815 8318 . + . ID=gene-HMPREF3052_00535;Name=HMPREF3052_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00535 GCA_001815685.1|KV821584.1 Protein Homology CDS 7815 8318 . + 0 ID=cds-OFO27860.1;Parent=gene-HMPREF3052_00535;Dbxref=NCBI_GP:OFO27860.1;Name=OFO27860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312688.1;locus_tag=HMPREF3052_00535;product=peptide deformylase;protein_id=OFO27860.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 8454 9380 . + . ID=gene-HMPREF3052_00540;Name=HMPREF3052_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00540 GCA_001815685.1|KV821584.1 Protein Homology CDS 8454 9380 . + 0 ID=cds-OFO27861.1;Parent=gene-HMPREF3052_00540;Dbxref=NCBI_GP:OFO27861.1;Name=OFO27861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A9M463.1;locus_tag=HMPREF3052_00540;product=methionyl-tRNA formyltransferase;protein_id=OFO27861.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 9414 9932 . + . ID=gene-HMPREF3052_00545;Name=HMPREF3052_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00545 GCA_001815685.1|KV821584.1 Protein Homology CDS 9414 9932 . + 0 ID=cds-OFO27862.1;Parent=gene-HMPREF3052_00545;Dbxref=NCBI_GP:OFO27862.1;Name=OFO27862.1;Note=interacts and inactivates RNase III during cold shock;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520178.1;locus_tag=HMPREF3052_00545;product=RNase III inhibitor;protein_id=OFO27862.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 9979 11238 . + . ID=gene-HMPREF3052_00550;Name=HMPREF3052_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00550 GCA_001815685.1|KV821584.1 Protein Homology CDS 9979 11238 . + 0 ID=cds-OFO27863.1;Parent=gene-HMPREF3052_00550;Dbxref=NCBI_GP:OFO27863.1;Name=OFO27863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520179.1;locus_tag=HMPREF3052_00550;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=OFO27863.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 11204 11797 . + . ID=gene-HMPREF3052_00555;Name=HMPREF3052_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00555 GCA_001815685.1|KV821584.1 Protein Homology CDS 11204 11797 . + 0 ID=cds-OFO27864.1;Parent=gene-HMPREF3052_00555;Dbxref=NCBI_GP:OFO27864.1;Name=OFO27864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749237.1;locus_tag=HMPREF3052_00555;product=hypothetical protein;protein_id=OFO27864.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 11801 13927 . + . ID=gene-HMPREF3052_00560;Name=HMPREF3052_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00560 GCA_001815685.1|KV821584.1 Protein Homology CDS 11801 13927 . + 0 ID=cds-OFO27865.1;Parent=gene-HMPREF3052_00560;Dbxref=NCBI_GP:OFO27865.1;Name=OFO27865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679493.1;locus_tag=HMPREF3052_00560;product=PAS domain-containing sensor histidine kinase;protein_id=OFO27865.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 13914 15188 . + . ID=gene-HMPREF3052_00565;Name=HMPREF3052_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00565 GCA_001815685.1|KV821584.1 Protein Homology CDS 13914 15188 . + 0 ID=cds-OFO27866.1;Parent=gene-HMPREF3052_00565;Dbxref=NCBI_GP:OFO27866.1;Name=OFO27866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749241.1;locus_tag=HMPREF3052_00565;product=transcriptional regulator;protein_id=OFO27866.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 15423 16613 . + . ID=gene-HMPREF3052_00570;Name=HMPREF3052_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00570 GCA_001815685.1|KV821584.1 Protein Homology CDS 15423 16613 . + 0 ID=cds-OFO27867.1;Parent=gene-HMPREF3052_00570;Dbxref=NCBI_GP:OFO27867.1;Name=OFO27867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679496.1;locus_tag=HMPREF3052_00570;product=DNA processing protein DprA;protein_id=OFO27867.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 16638 17093 . + . ID=gene-HMPREF3052_00575;Name=HMPREF3052_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00575 GCA_001815685.1|KV821584.1 Protein Homology CDS 16638 17093 . + 0 ID=cds-OFO27868.1;Parent=gene-HMPREF3052_00575;Dbxref=NCBI_GP:OFO27868.1;Name=OFO27868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749244.1;locus_tag=HMPREF3052_00575;product=hypothetical protein;protein_id=OFO27868.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 17173 19479 . + . ID=gene-HMPREF3052_00580;Name=HMPREF3052_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00580 GCA_001815685.1|KV821584.1 Protein Homology CDS 17173 19479 . + 0 ID=cds-OFO27869.1;Parent=gene-HMPREF3052_00580;Dbxref=NCBI_GP:OFO27869.1;Name=OFO27869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016670597.1;locus_tag=HMPREF3052_00580;product=DNA topoisomerase I;protein_id=OFO27869.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 19629 20201 . + . ID=gene-HMPREF3052_00585;Name=HMPREF3052_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00585 GCA_001815685.1|KV821584.1 Protein Homology CDS 19629 20201 . + 0 ID=cds-OFO27870.1;Parent=gene-HMPREF3052_00585;Dbxref=NCBI_GP:OFO27870.1;Name=OFO27870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707120.1;locus_tag=HMPREF3052_00585;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=OFO27870.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 20324 20575 . + . ID=gene-HMPREF3052_00590;Name=HMPREF3052_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00590 GCA_001815685.1|KV821584.1 Protein Homology CDS 20324 20575 . + 0 ID=cds-OFO27871.1;Parent=gene-HMPREF3052_00590;Dbxref=NCBI_GP:OFO27871.1;Name=OFO27871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215364.1;locus_tag=HMPREF3052_00590;product=ferredoxin;protein_id=OFO27871.1;transl_table=11 GCA_001815685.1|KV821584.1 Genbank gene 20674 20757 . + . ID=gene-HMPREF3052_00595;Name=HMPREF3052_00595;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_00595 GCA_001815685.1|KV821584.1 tRNAscan-SE tRNA 20674 20757 . + . ID=rna-HMPREF3052_00595;Parent=gene-HMPREF3052_00595;anticodon=(pos:20708..20710);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00595;product=tRNA-Tyr GCA_001815685.1|KV821584.1 tRNAscan-SE exon 20674 20757 . + . ID=exon-HMPREF3052_00595-1;Parent=rna-HMPREF3052_00595;anticodon=(pos:20708..20710);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00595;product=tRNA-Tyr GCA_001815685.1|KV821584.1 Genbank gene 20790 20863 . + . ID=gene-HMPREF3052_00600;Name=HMPREF3052_00600;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_00600 GCA_001815685.1|KV821584.1 tRNAscan-SE tRNA 20790 20863 . + . ID=rna-HMPREF3052_00600;Parent=gene-HMPREF3052_00600;anticodon=(pos:20822..20824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00600;product=tRNA-Gly GCA_001815685.1|KV821584.1 tRNAscan-SE exon 20790 20863 . + . ID=exon-HMPREF3052_00600-1;Parent=rna-HMPREF3052_00600;anticodon=(pos:20822..20824);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00600;product=tRNA-Gly GCA_001815685.1|KV821584.1 Genbank gene 20873 20947 . + . ID=gene-HMPREF3052_00605;Name=HMPREF3052_00605;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_00605 GCA_001815685.1|KV821584.1 tRNAscan-SE tRNA 20873 20947 . + . ID=rna-HMPREF3052_00605;Parent=gene-HMPREF3052_00605;anticodon=(pos:20905..20907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00605;product=tRNA-Thr GCA_001815685.1|KV821584.1 tRNAscan-SE exon 20873 20947 . + . ID=exon-HMPREF3052_00605-1;Parent=rna-HMPREF3052_00605;anticodon=(pos:20905..20907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_00605;product=tRNA-Thr ##sequence-region KV821585.1 1 8387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821585.1 Genbank region 1 8387 . + . ID=KV821585.1:1..8387;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821585.1 Genbank gene 44 772 . - . ID=gene-HMPREF3052_00610;Name=HMPREF3052_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00610 GCA_001815685.1|KV821585.1 Protein Homology CDS 44 772 . - 0 ID=cds-OFO26968.1;Parent=gene-HMPREF3052_00610;Dbxref=NCBI_GP:OFO26968.1;Name=OFO26968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285004.1;locus_tag=HMPREF3052_00610;product=hypothetical protein;protein_id=OFO26968.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 1138 2568 . + . ID=gene-HMPREF3052_00615;Name=HMPREF3052_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00615 GCA_001815685.1|KV821585.1 Protein Homology CDS 1138 2568 . + 0 ID=cds-OFO26969.1;Parent=gene-HMPREF3052_00615;Dbxref=NCBI_GP:OFO26969.1;Name=OFO26969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745950.1;locus_tag=HMPREF3052_00615;product=alanine glycine permease;protein_id=OFO26969.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 2627 3253 . - . ID=gene-HMPREF3052_00620;Name=HMPREF3052_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00620 GCA_001815685.1|KV821585.1 Protein Homology CDS 2627 3253 . - 0 ID=cds-OFO26970.1;Parent=gene-HMPREF3052_00620;Dbxref=NCBI_GP:OFO26970.1;Name=OFO26970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745948.1;locus_tag=HMPREF3052_00620;product=hemolysin III;protein_id=OFO26970.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 3306 3530 . - . ID=gene-HMPREF3052_00625;Name=HMPREF3052_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00625 GCA_001815685.1|KV821585.1 GeneMarkS+ CDS 3306 3530 . - 0 ID=cds-OFO26971.1;Parent=gene-HMPREF3052_00625;Dbxref=NCBI_GP:OFO26971.1;Name=OFO26971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_00625;product=hypothetical protein;protein_id=OFO26971.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 3638 4201 . + . ID=gene-HMPREF3052_00630;Name=HMPREF3052_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00630 GCA_001815685.1|KV821585.1 Protein Homology CDS 3638 4201 . + 0 ID=cds-OFO26972.1;Parent=gene-HMPREF3052_00630;Dbxref=NCBI_GP:OFO26972.1;Name=OFO26972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745944.1;locus_tag=HMPREF3052_00630;product=esterase;protein_id=OFO26972.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 4334 5368 . - . ID=gene-HMPREF3052_00635;Name=HMPREF3052_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00635 GCA_001815685.1|KV821585.1 Protein Homology CDS 4334 5368 . - 0 ID=cds-OFO26973.1;Parent=gene-HMPREF3052_00635;Dbxref=NCBI_GP:OFO26973.1;Name=OFO26973.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687600.1;locus_tag=HMPREF3052_00635;product=dihydroorotase;protein_id=OFO26973.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 5466 6059 . - . ID=gene-HMPREF3052_00640;Name=HMPREF3052_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00640 GCA_001815685.1|KV821585.1 Protein Homology CDS 5466 6059 . - 0 ID=cds-OFO26974.1;Parent=gene-HMPREF3052_00640;Dbxref=NCBI_GP:OFO26974.1;Name=OFO26974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745940.1;locus_tag=HMPREF3052_00640;product=hypothetical protein;protein_id=OFO26974.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 6072 6296 . - . ID=gene-HMPREF3052_00645;Name=HMPREF3052_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00645 GCA_001815685.1|KV821585.1 Protein Homology CDS 6072 6296 . - 0 ID=cds-OFO26975.1;Parent=gene-HMPREF3052_00645;Dbxref=NCBI_GP:OFO26975.1;Name=OFO26975.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214174.1;locus_tag=HMPREF3052_00645;product=hypothetical protein;protein_id=OFO26975.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 6406 7017 . + . ID=gene-HMPREF3052_00650;Name=HMPREF3052_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00650 GCA_001815685.1|KV821585.1 Protein Homology CDS 6406 7017 . + 0 ID=cds-OFO26976.1;Parent=gene-HMPREF3052_00650;Dbxref=NCBI_GP:OFO26976.1;Name=OFO26976.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227524.1;locus_tag=HMPREF3052_00650;product=cryptic protein cnp1;protein_id=OFO26976.1;transl_table=11 GCA_001815685.1|KV821585.1 Genbank gene 7081 8196 . - . ID=gene-HMPREF3052_00655;Name=HMPREF3052_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00655 GCA_001815685.1|KV821585.1 Protein Homology CDS 7081 8196 . - 0 ID=cds-OFO26977.1;Parent=gene-HMPREF3052_00655;Dbxref=NCBI_GP:OFO26977.1;Name=OFO26977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681933.1;locus_tag=HMPREF3052_00655;product=hypothetical protein;protein_id=OFO26977.1;transl_table=11 ##sequence-region KV821586.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821586.1 Genbank region 1 277 . + . ID=KV821586.1:1..277;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821586.1 Genbank pseudogene 1 277 . - . ID=gene-HMPREF3052_00660;Name=HMPREF3052_00660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00660;pseudo=true GCA_001815685.1|KV821586.1 Protein Homology CDS 1 277 . - 2 ID=cds-HMPREF3052_00660;Parent=gene-HMPREF3052_00660;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284738.1;locus_tag=HMPREF3052_00660;product=integrase;pseudo=true;transl_table=11 ##sequence-region KV821587.1 1 213624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821587.1 Genbank region 1 213624 . + . ID=KV821587.1:1..213624;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821587.1 Genbank gene 65 439 . - . ID=gene-HMPREF3052_00665;Name=HMPREF3052_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00665 GCA_001815685.1|KV821587.1 Protein Homology CDS 65 439 . - 0 ID=cds-OFO25774.1;Parent=gene-HMPREF3052_00665;Dbxref=NCBI_GP:OFO25774.1;Name=OFO25774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746670.1;locus_tag=HMPREF3052_00665;product=rod shape-determining protein RodA;protein_id=OFO25774.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 646 1953 . + . ID=gene-HMPREF3052_00670;Name=HMPREF3052_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00670 GCA_001815685.1|KV821587.1 Protein Homology CDS 646 1953 . + 0 ID=cds-OFO25775.1;Parent=gene-HMPREF3052_00670;Dbxref=NCBI_GP:OFO25775.1;Name=OFO25775.1;Note=catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520380.1;locus_tag=HMPREF3052_00670;product=homoserine dehydrogenase;protein_id=OFO25775.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 1946 2380 . + . ID=gene-HMPREF3052_00675;Name=HMPREF3052_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00675 GCA_001815685.1|KV821587.1 Protein Homology CDS 1946 2380 . + 0 ID=cds-OFO25776.1;Parent=gene-HMPREF3052_00675;Dbxref=NCBI_GP:OFO25776.1;Name=OFO25776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235815.1;locus_tag=HMPREF3052_00675;product=hypothetical protein;protein_id=OFO25776.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 2527 3021 . + . ID=gene-HMPREF3052_00680;Name=HMPREF3052_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00680 GCA_001815685.1|KV821587.1 Protein Homology CDS 2527 3021 . + 0 ID=cds-OFO25827.1;Parent=gene-HMPREF3052_00680;Dbxref=NCBI_GP:OFO25827.1;Name=OFO25827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756439.1;locus_tag=HMPREF3052_00680;product=hypothetical protein;protein_id=OFO25827.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 3067 3783 . - . ID=gene-HMPREF3052_00685;Name=HMPREF3052_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00685 GCA_001815685.1|KV821587.1 Protein Homology CDS 3067 3783 . - 0 ID=cds-OFO25777.1;Parent=gene-HMPREF3052_00685;Dbxref=NCBI_GP:OFO25777.1;Name=OFO25777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746659.1;locus_tag=HMPREF3052_00685;product=5'-methylthioadenosine phosphorylase;protein_id=OFO25777.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 3850 4920 . - . ID=gene-HMPREF3052_00690;Name=HMPREF3052_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00690 GCA_001815685.1|KV821587.1 Protein Homology CDS 3850 4920 . - 0 ID=cds-OFO25778.1;Parent=gene-HMPREF3052_00690;Dbxref=NCBI_GP:OFO25778.1;Name=OFO25778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742466.1;locus_tag=HMPREF3052_00690;product=AI-2E family transporter;protein_id=OFO25778.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 5126 6160 . + . ID=gene-HMPREF3052_00695;Name=HMPREF3052_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00695 GCA_001815685.1|KV821587.1 Protein Homology CDS 5126 6160 . + 0 ID=cds-OFO25779.1;Parent=gene-HMPREF3052_00695;Dbxref=NCBI_GP:OFO25779.1;Name=OFO25779.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213482.1;locus_tag=HMPREF3052_00695;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=OFO25779.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 6235 7446 . - . ID=gene-HMPREF3052_00700;Name=HMPREF3052_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00700 GCA_001815685.1|KV821587.1 Protein Homology CDS 6235 7446 . - 0 ID=cds-OFO25780.1;Parent=gene-HMPREF3052_00700;Dbxref=NCBI_GP:OFO25780.1;Name=OFO25780.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765011.1;locus_tag=HMPREF3052_00700;product=acetate kinase;protein_id=OFO25780.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 7660 8829 . - . ID=gene-HMPREF3052_00705;Name=HMPREF3052_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00705 GCA_001815685.1|KV821587.1 Protein Homology CDS 7660 8829 . - 0 ID=cds-OFO25781.1;Parent=gene-HMPREF3052_00705;Dbxref=NCBI_GP:OFO25781.1;Name=OFO25781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779825.1;locus_tag=HMPREF3052_00705;product=3-methylitaconate isomerase;protein_id=OFO25781.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 8947 11553 . - . ID=gene-HMPREF3052_00710;Name=HMPREF3052_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00710 GCA_001815685.1|KV821587.1 Protein Homology CDS 8947 11553 . - 0 ID=cds-OFO25782.1;Parent=gene-HMPREF3052_00710;Dbxref=NCBI_GP:OFO25782.1;Name=OFO25782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285800.1;locus_tag=HMPREF3052_00710;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=OFO25782.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 11954 13108 . - . ID=gene-HMPREF3052_00715;Name=HMPREF3052_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00715 GCA_001815685.1|KV821587.1 Protein Homology CDS 11954 13108 . - 0 ID=cds-OFO25783.1;Parent=gene-HMPREF3052_00715;Dbxref=NCBI_GP:OFO25783.1;Name=OFO25783.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686375.1;locus_tag=HMPREF3052_00715;product=citrate synthase/methylcitrate synthase;protein_id=OFO25783.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 13193 14068 . - . ID=gene-HMPREF3052_00720;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=HMPREF3052_00720 GCA_001815685.1|KV821587.1 Protein Homology CDS 13193 14068 . - 0 ID=cds-OFO25828.1;Parent=gene-HMPREF3052_00720;Dbxref=NCBI_GP:OFO25828.1;Name=OFO25828.1;Note=catalyzes the formation of pyruvate and succinate from 2-methylisocitrate;gbkey=CDS;gene=prpB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779818.1;locus_tag=HMPREF3052_00720;product=methylisocitrate lyase;protein_id=OFO25828.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 14837 15259 . - . ID=gene-HMPREF3052_00725;Name=HMPREF3052_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00725 GCA_001815685.1|KV821587.1 Protein Homology CDS 14837 15259 . - 0 ID=cds-OFO25784.1;Parent=gene-HMPREF3052_00725;Dbxref=NCBI_GP:OFO25784.1;Name=OFO25784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573802.1;locus_tag=HMPREF3052_00725;product=hypothetical protein;protein_id=OFO25784.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 15261 16067 . - . ID=gene-HMPREF3052_00730;Name=HMPREF3052_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00730 GCA_001815685.1|KV821587.1 Protein Homology CDS 15261 16067 . - 0 ID=cds-OFO25785.1;Parent=gene-HMPREF3052_00730;Dbxref=NCBI_GP:OFO25785.1;Name=OFO25785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746642.1;locus_tag=HMPREF3052_00730;product=NTP pyrophosphohydrolase;protein_id=OFO25785.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 16218 16595 . - . ID=gene-HMPREF3052_00735;Name=HMPREF3052_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00735 GCA_001815685.1|KV821587.1 Protein Homology CDS 16218 16595 . - 0 ID=cds-OFO25786.1;Parent=gene-HMPREF3052_00735;Dbxref=NCBI_GP:OFO25786.1;Name=OFO25786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273255.1;locus_tag=HMPREF3052_00735;product=holo-ACP synthase;protein_id=OFO25786.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 16684 17412 . - . ID=gene-HMPREF3052_00740;Name=HMPREF3052_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00740 GCA_001815685.1|KV821587.1 Protein Homology CDS 16684 17412 . - 0 ID=cds-OFO25787.1;Parent=gene-HMPREF3052_00740;Dbxref=NCBI_GP:OFO25787.1;Name=OFO25787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269831.1;locus_tag=HMPREF3052_00740;product=pyridoxine 5'-phosphate synthase;protein_id=OFO25787.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 17481 18224 . - . ID=gene-HMPREF3052_00745;Name=HMPREF3052_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00745 GCA_001815685.1|KV821587.1 Protein Homology CDS 17481 18224 . - 0 ID=cds-OFO25788.1;Parent=gene-HMPREF3052_00745;Dbxref=NCBI_GP:OFO25788.1;Name=OFO25788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686354.1;locus_tag=HMPREF3052_00745;product=DNA repair protein RecO;protein_id=OFO25788.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 18365 19801 . + . ID=gene-HMPREF3052_00750;Name=HMPREF3052_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00750 GCA_001815685.1|KV821587.1 Protein Homology CDS 18365 19801 . + 0 ID=cds-OFO25789.1;Parent=gene-HMPREF3052_00750;Dbxref=NCBI_GP:OFO25789.1;Name=OFO25789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520364.1;locus_tag=HMPREF3052_00750;product=patatin;protein_id=OFO25789.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 19914 20648 . + . ID=gene-HMPREF3052_00755;Name=HMPREF3052_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00755 GCA_001815685.1|KV821587.1 Protein Homology CDS 19914 20648 . + 0 ID=cds-OFO25790.1;Parent=gene-HMPREF3052_00755;Dbxref=NCBI_GP:OFO25790.1;Name=OFO25790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688798.1;locus_tag=HMPREF3052_00755;product=hypothetical protein;protein_id=OFO25790.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 20700 21032 . - . ID=gene-HMPREF3052_00760;Name=HMPREF3052_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00760 GCA_001815685.1|KV821587.1 Protein Homology CDS 20700 21032 . - 0 ID=cds-OFO25791.1;Parent=gene-HMPREF3052_00760;Dbxref=NCBI_GP:OFO25791.1;Name=OFO25791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686426.1;locus_tag=HMPREF3052_00760;product=stress response protein;protein_id=OFO25791.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 21437 23716 . + . ID=gene-HMPREF3052_00765;Name=HMPREF3052_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00765 GCA_001815685.1|KV821587.1 Protein Homology CDS 21437 23716 . + 0 ID=cds-OFO25792.1;Parent=gene-HMPREF3052_00765;Dbxref=NCBI_GP:OFO25792.1;Name=OFO25792.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756856.1;locus_tag=HMPREF3052_00765;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=OFO25792.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 23783 24523 . + . ID=gene-HMPREF3052_00770;Name=HMPREF3052_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00770 GCA_001815685.1|KV821587.1 Protein Homology CDS 23783 24523 . + 0 ID=cds-OFO25793.1;Parent=gene-HMPREF3052_00770;Dbxref=NCBI_GP:OFO25793.1;Name=OFO25793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241642.1;locus_tag=HMPREF3052_00770;product=hypothetical protein;protein_id=OFO25793.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 24648 25802 . + . ID=gene-HMPREF3052_00775;Name=HMPREF3052_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00775 GCA_001815685.1|KV821587.1 Protein Homology CDS 24648 25802 . + 0 ID=cds-OFO25794.1;Parent=gene-HMPREF3052_00775;Dbxref=NCBI_GP:OFO25794.1;Name=OFO25794.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427513.1;locus_tag=HMPREF3052_00775;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=OFO25794.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank pseudogene 25878 26256 . + . ID=gene-HMPREF3052_00780;Name=HMPREF3052_00780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_00780;pseudo=true GCA_001815685.1|KV821587.1 Protein Homology CDS 25878 26256 . + 0 ID=cds-HMPREF3052_00780;Parent=gene-HMPREF3052_00780;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427512.1;locus_tag=HMPREF3052_00780;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 26318 26617 . + . ID=gene-HMPREF3052_00785;Name=HMPREF3052_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00785 GCA_001815685.1|KV821587.1 Protein Homology CDS 26318 26617 . + 0 ID=cds-OFO25795.1;Parent=gene-HMPREF3052_00785;Dbxref=NCBI_GP:OFO25795.1;Name=OFO25795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686421.1;locus_tag=HMPREF3052_00785;product=[Fe-S]-binding protein;protein_id=OFO25795.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 26695 27264 . - . ID=gene-HMPREF3052_00790;Name=HMPREF3052_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00790 GCA_001815685.1|KV821587.1 Protein Homology CDS 26695 27264 . - 0 ID=cds-OFO25796.1;Parent=gene-HMPREF3052_00790;Dbxref=NCBI_GP:OFO25796.1;Name=OFO25796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746621.1;locus_tag=HMPREF3052_00790;product=transcriptional regulator;protein_id=OFO25796.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 27399 28148 . - . ID=gene-HMPREF3052_00795;Name=HMPREF3052_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00795 GCA_001815685.1|KV821587.1 Protein Homology CDS 27399 28148 . - 0 ID=cds-OFO25797.1;Parent=gene-HMPREF3052_00795;Dbxref=NCBI_GP:OFO25797.1;Name=OFO25797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746620.1;locus_tag=HMPREF3052_00795;product=3-dehydroquinase;protein_id=OFO25797.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 28176 30017 . - . ID=gene-HMPREF3052_00800;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF3052_00800 GCA_001815685.1|KV821587.1 Protein Homology CDS 28176 30017 . - 0 ID=cds-OFO25798.1;Parent=gene-HMPREF3052_00800;Dbxref=NCBI_GP:OFO25798.1;Name=OFO25798.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464386.1;locus_tag=HMPREF3052_00800;product=excinuclease ABC subunit C;protein_id=OFO25798.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 30082 32853 . - . ID=gene-HMPREF3052_00805;Name=HMPREF3052_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00805 GCA_001815685.1|KV821587.1 Protein Homology CDS 30082 32853 . - 0 ID=cds-OFO25799.1;Parent=gene-HMPREF3052_00805;Dbxref=NCBI_GP:OFO25799.1;Name=OFO25799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520353.1;locus_tag=HMPREF3052_00805;product=DNA gyrase subunit A;protein_id=OFO25799.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 32981 33463 . - . ID=gene-HMPREF3052_00810;Name=HMPREF3052_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00810 GCA_001815685.1|KV821587.1 Protein Homology CDS 32981 33463 . - 0 ID=cds-OFO25800.1;Parent=gene-HMPREF3052_00810;Dbxref=NCBI_GP:OFO25800.1;Name=OFO25800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686444.1;locus_tag=HMPREF3052_00810;product=acyl-CoA thioesterase;protein_id=OFO25800.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 33578 34648 . - . ID=gene-HMPREF3052_00815;Name=HMPREF3052_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00815 GCA_001815685.1|KV821587.1 Protein Homology CDS 33578 34648 . - 0 ID=cds-OFO25801.1;Parent=gene-HMPREF3052_00815;Dbxref=NCBI_GP:OFO25801.1;Name=OFO25801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520352.1;locus_tag=HMPREF3052_00815;product=magnesium and cobalt transport protein CorA;protein_id=OFO25801.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 34751 36109 . - . ID=gene-HMPREF3052_00820;Name=HMPREF3052_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00820 GCA_001815685.1|KV821587.1 Protein Homology CDS 34751 36109 . - 0 ID=cds-OFO25802.1;Parent=gene-HMPREF3052_00820;Dbxref=NCBI_GP:OFO25802.1;Name=OFO25802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464399.1;locus_tag=HMPREF3052_00820;product=glutamate--cysteine ligase;protein_id=OFO25802.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 36375 37784 . + . ID=gene-HMPREF3052_00825;Name=HMPREF3052_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00825 GCA_001815685.1|KV821587.1 Protein Homology CDS 36375 37784 . + 0 ID=cds-OFO25803.1;Parent=gene-HMPREF3052_00825;Dbxref=NCBI_GP:OFO25803.1;Name=OFO25803.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448951.1;locus_tag=HMPREF3052_00825;product=isopropylmalate isomerase;protein_id=OFO25803.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 37909 38163 . + . ID=gene-HMPREF3052_00830;Name=HMPREF3052_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00830 GCA_001815685.1|KV821587.1 Protein Homology CDS 37909 38163 . + 0 ID=cds-OFO25804.1;Parent=gene-HMPREF3052_00830;Dbxref=NCBI_GP:OFO25804.1;Name=OFO25804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273351.1;locus_tag=HMPREF3052_00830;product=hypothetical protein;protein_id=OFO25804.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 38268 38633 . + . ID=gene-HMPREF3052_00835;Name=HMPREF3052_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00835 GCA_001815685.1|KV821587.1 Protein Homology CDS 38268 38633 . + 0 ID=cds-OFO25805.1;Parent=gene-HMPREF3052_00835;Dbxref=NCBI_GP:OFO25805.1;Name=OFO25805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686332.1;locus_tag=HMPREF3052_00835;product=glyoxalase;protein_id=OFO25805.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 38679 39320 . + . ID=gene-HMPREF3052_00840;Name=HMPREF3052_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00840 GCA_001815685.1|KV821587.1 Protein Homology CDS 38679 39320 . + 0 ID=cds-OFO25806.1;Parent=gene-HMPREF3052_00840;Dbxref=NCBI_GP:OFO25806.1;Name=OFO25806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JU81.1;locus_tag=HMPREF3052_00840;product=3-isopropylmalate dehydratase small subunit;protein_id=OFO25806.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 39389 40057 . + . ID=gene-HMPREF3052_00845;Name=HMPREF3052_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00845 GCA_001815685.1|KV821587.1 Protein Homology CDS 39389 40057 . + 0 ID=cds-OFO25807.1;Parent=gene-HMPREF3052_00845;Dbxref=NCBI_GP:OFO25807.1;Name=OFO25807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746602.1;locus_tag=HMPREF3052_00845;product=hypothetical protein;protein_id=OFO25807.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 40155 40616 . + . ID=gene-HMPREF3052_00850;Name=HMPREF3052_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00850 GCA_001815685.1|KV821587.1 Protein Homology CDS 40155 40616 . + 0 ID=cds-OFO25808.1;Parent=gene-HMPREF3052_00850;Dbxref=NCBI_GP:OFO25808.1;Name=OFO25808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520346.1;locus_tag=HMPREF3052_00850;product=YhcH/YjgK/YiaL family protein;protein_id=OFO25808.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 40655 41518 . + . ID=gene-HMPREF3052_00855;Name=HMPREF3052_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00855 GCA_001815685.1|KV821587.1 Protein Homology CDS 40655 41518 . + 0 ID=cds-OFO25809.1;Parent=gene-HMPREF3052_00855;Dbxref=NCBI_GP:OFO25809.1;Name=OFO25809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686337.1;locus_tag=HMPREF3052_00855;product=hypothetical protein;protein_id=OFO25809.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 41585 42655 . + . ID=gene-HMPREF3052_00860;Name=HMPREF3052_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00860 GCA_001815685.1|KV821587.1 Protein Homology CDS 41585 42655 . + 0 ID=cds-OFO25810.1;Parent=gene-HMPREF3052_00860;Dbxref=NCBI_GP:OFO25810.1;Name=OFO25810.1;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311437.1;locus_tag=HMPREF3052_00860;product=3-isopropylmalate dehydrogenase;protein_id=OFO25810.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 42785 44194 . - . ID=gene-HMPREF3052_00865;Name=HMPREF3052_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00865 GCA_001815685.1|KV821587.1 Protein Homology CDS 42785 44194 . - 0 ID=cds-OFO25811.1;Parent=gene-HMPREF3052_00865;Dbxref=NCBI_GP:OFO25811.1;Name=OFO25811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746595.1;locus_tag=HMPREF3052_00865;product=RNA helicase;protein_id=OFO25811.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 44531 45475 . + . ID=gene-HMPREF3052_00870;Name=HMPREF3052_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00870 GCA_001815685.1|KV821587.1 Protein Homology CDS 44531 45475 . + 0 ID=cds-OFO25812.1;Parent=gene-HMPREF3052_00870;Dbxref=NCBI_GP:OFO25812.1;Name=OFO25812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520340.1;locus_tag=HMPREF3052_00870;product=oxidoreductase;protein_id=OFO25812.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 45588 46769 . + . ID=gene-HMPREF3052_00875;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=HMPREF3052_00875 GCA_001815685.1|KV821587.1 Protein Homology CDS 45588 46769 . + 0 ID=cds-OFO25813.1;Parent=gene-HMPREF3052_00875;Dbxref=NCBI_GP:OFO25813.1;Name=OFO25813.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284636.1;locus_tag=HMPREF3052_00875;product=acetylornithine aminotransferase;protein_id=OFO25813.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 46997 47932 . + . ID=gene-HMPREF3052_00880;Name=HMPREF3052_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00880 GCA_001815685.1|KV821587.1 Protein Homology CDS 46997 47932 . + 0 ID=cds-OFO25814.1;Parent=gene-HMPREF3052_00880;Dbxref=NCBI_GP:OFO25814.1;Name=OFO25814.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B subclass 1A is a dimer formed by two identical PyrD subunits each containing an FMN group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520335.1;locus_tag=HMPREF3052_00880;product=dihydroorotate dehydrogenase;protein_id=OFO25814.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 48024 50024 . + . ID=gene-HMPREF3052_00885;Name=HMPREF3052_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00885 GCA_001815685.1|KV821587.1 Protein Homology CDS 48024 50024 . + 0 ID=cds-OFO25815.1;Parent=gene-HMPREF3052_00885;Dbxref=NCBI_GP:OFO25815.1;Name=OFO25815.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686392.1;locus_tag=HMPREF3052_00885;product=ATP-dependent DNA helicase Rep;protein_id=OFO25815.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 50331 54227 . + . ID=gene-HMPREF3052_00890;Name=HMPREF3052_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00890 GCA_001815685.1|KV821587.1 Protein Homology CDS 50331 54227 . + 0 ID=cds-OFO25816.1;Parent=gene-HMPREF3052_00890;Dbxref=NCBI_GP:OFO25816.1;Name=OFO25816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235254.1;locus_tag=HMPREF3052_00890;product=phosphoribosylformylglycinamidine synthase;protein_id=OFO25816.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 54551 55363 . + . ID=gene-HMPREF3052_00895;Name=HMPREF3052_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00895 GCA_001815685.1|KV821587.1 Protein Homology CDS 54551 55363 . + 0 ID=cds-OFO25817.1;Parent=gene-HMPREF3052_00895;Dbxref=NCBI_GP:OFO25817.1;Name=OFO25817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270297.1;locus_tag=HMPREF3052_00895;product=type II restriction endonuclease;protein_id=OFO25817.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 55630 56715 . + . ID=gene-HMPREF3052_00900;Name=HMPREF3052_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00900 GCA_001815685.1|KV821587.1 Protein Homology CDS 55630 56715 . + 0 ID=cds-OFO25818.1;Parent=gene-HMPREF3052_00900;Dbxref=NCBI_GP:OFO25818.1;Name=OFO25818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520330.1;locus_tag=HMPREF3052_00900;product=hypothetical protein;protein_id=OFO25818.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 56739 57488 . + . ID=gene-HMPREF3052_00905;Name=HMPREF3052_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00905 GCA_001815685.1|KV821587.1 Protein Homology CDS 56739 57488 . + 0 ID=cds-OFO25819.1;Parent=gene-HMPREF3052_00905;Dbxref=NCBI_GP:OFO25819.1;Name=OFO25819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678284.1;locus_tag=HMPREF3052_00905;product=hydroxyacylglutathione hydrolase;protein_id=OFO25819.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 57559 59124 . - . ID=gene-HMPREF3052_00910;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF3052_00910 GCA_001815685.1|KV821587.1 Protein Homology CDS 57559 59124 . - 0 ID=cds-OFO25820.1;Parent=gene-HMPREF3052_00910;Dbxref=NCBI_GP:OFO25820.1;Name=OFO25820.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221566.1;locus_tag=HMPREF3052_00910;product=GMP synthetase;protein_id=OFO25820.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 59273 59599 . - . ID=gene-HMPREF3052_00915;Name=HMPREF3052_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00915 GCA_001815685.1|KV821587.1 Protein Homology CDS 59273 59599 . - 0 ID=cds-OFO25821.1;Parent=gene-HMPREF3052_00915;Dbxref=NCBI_GP:OFO25821.1;Name=OFO25821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740867.1;locus_tag=HMPREF3052_00915;product=hypothetical protein;protein_id=OFO25821.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 59786 60238 . - . ID=gene-HMPREF3052_00920;Name=HMPREF3052_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00920 GCA_001815685.1|KV821587.1 Protein Homology CDS 59786 60238 . - 0 ID=cds-OFO25822.1;Parent=gene-HMPREF3052_00920;Dbxref=NCBI_GP:OFO25822.1;Name=OFO25822.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680707.1;locus_tag=HMPREF3052_00920;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=OFO25822.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 60350 60982 . + . ID=gene-HMPREF3052_00925;Name=HMPREF3052_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00925 GCA_001815685.1|KV821587.1 Protein Homology CDS 60350 60982 . + 0 ID=cds-OFO25823.1;Parent=gene-HMPREF3052_00925;Dbxref=NCBI_GP:OFO25823.1;Name=OFO25823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449040.1;locus_tag=HMPREF3052_00925;product=pyridoxamine 5'-phosphate oxidase;protein_id=OFO25823.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 61142 62200 . + . ID=gene-HMPREF3052_00930;Name=HMPREF3052_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00930 GCA_001815685.1|KV821587.1 Protein Homology CDS 61142 62200 . + 0 ID=cds-OFO25824.1;Parent=gene-HMPREF3052_00930;Dbxref=NCBI_GP:OFO25824.1;Name=OFO25824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250226.1;locus_tag=HMPREF3052_00930;product=23S rRNA pseudouridylate synthase B;protein_id=OFO25824.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 62583 64385 . - . ID=gene-HMPREF3052_00935;Name=HMPREF3052_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00935 GCA_001815685.1|KV821587.1 Protein Homology CDS 62583 64385 . - 0 ID=cds-OFO25825.1;Parent=gene-HMPREF3052_00935;Dbxref=NCBI_GP:OFO25825.1;Name=OFO25825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525353.1;locus_tag=HMPREF3052_00935;product=AAA family ATPase;protein_id=OFO25825.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 64942 65895 . + . ID=gene-HMPREF3052_00940;Name=ldh;gbkey=Gene;gene=ldh;gene_biotype=protein_coding;locus_tag=HMPREF3052_00940 GCA_001815685.1|KV821587.1 Protein Homology CDS 64942 65895 . + 0 ID=cds-OFO25826.1;Parent=gene-HMPREF3052_00940;Dbxref=NCBI_GP:OFO25826.1;Name=OFO25826.1;Note=Converts (S)-lactate and NAD(+) to pyruvate and NADH;gbkey=CDS;gene=ldh;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312189.1;locus_tag=HMPREF3052_00940;product=L-lactate dehydrogenase;protein_id=OFO25826.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 66390 67139 . - . ID=gene-HMPREF3052_00945;Name=HMPREF3052_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00945 GCA_001815685.1|KV821587.1 Protein Homology CDS 66390 67139 . - 0 ID=cds-OFO25702.1;Parent=gene-HMPREF3052_00945;Dbxref=NCBI_GP:OFO25702.1;Name=OFO25702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779096.1;locus_tag=HMPREF3052_00945;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=OFO25702.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 67202 67510 . - . ID=gene-HMPREF3052_00950;Name=HMPREF3052_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00950 GCA_001815685.1|KV821587.1 Protein Homology CDS 67202 67510 . - 0 ID=cds-OFO25703.1;Parent=gene-HMPREF3052_00950;Dbxref=NCBI_GP:OFO25703.1;Name=OFO25703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746560.1;locus_tag=HMPREF3052_00950;product=hypothetical protein;protein_id=OFO25703.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 67507 68217 . - . ID=gene-HMPREF3052_00955;Name=HMPREF3052_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00955 GCA_001815685.1|KV821587.1 Protein Homology CDS 67507 68217 . - 0 ID=cds-OFO25704.1;Parent=gene-HMPREF3052_00955;Dbxref=NCBI_GP:OFO25704.1;Name=OFO25704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686491.1;locus_tag=HMPREF3052_00955;product=branched-chain amino acid ABC transporter permease;protein_id=OFO25704.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 68319 69293 . + . ID=gene-HMPREF3052_00960;Name=HMPREF3052_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00960 GCA_001815685.1|KV821587.1 Protein Homology CDS 68319 69293 . + 0 ID=cds-OFO25705.1;Parent=gene-HMPREF3052_00960;Dbxref=NCBI_GP:OFO25705.1;Name=OFO25705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520317.1;locus_tag=HMPREF3052_00960;product=phosphate starvation-inducible protein PhoH;protein_id=OFO25705.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 69415 70401 . + . ID=gene-HMPREF3052_00965;Name=HMPREF3052_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00965 GCA_001815685.1|KV821587.1 Protein Homology CDS 69415 70401 . + 0 ID=cds-OFO25706.1;Parent=gene-HMPREF3052_00965;Dbxref=NCBI_GP:OFO25706.1;Name=OFO25706.1;Note=catalyzes the oxidation of malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680720.1;locus_tag=HMPREF3052_00965;product=malate dehydrogenase;protein_id=OFO25706.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 70452 71888 . - . ID=gene-HMPREF3052_00970;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=HMPREF3052_00970 GCA_001815685.1|KV821587.1 Protein Homology CDS 70452 71888 . - 0 ID=cds-OFO25707.1;Parent=gene-HMPREF3052_00970;Dbxref=NCBI_GP:OFO25707.1;Name=OFO25707.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746550.1;locus_tag=HMPREF3052_00970;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=OFO25707.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 72218 73990 . + . ID=gene-HMPREF3052_00975;Name=HMPREF3052_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00975 GCA_001815685.1|KV821587.1 Protein Homology CDS 72218 73990 . + 0 ID=cds-OFO25708.1;Parent=gene-HMPREF3052_00975;Dbxref=NCBI_GP:OFO25708.1;Name=OFO25708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226201.1;locus_tag=HMPREF3052_00975;product=DNA primase;protein_id=OFO25708.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 74185 76137 . + . ID=gene-HMPREF3052_00980;Name=HMPREF3052_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00980 GCA_001815685.1|KV821587.1 Protein Homology CDS 74185 76137 . + 0 ID=cds-OFO25709.1;Parent=gene-HMPREF3052_00980;Dbxref=NCBI_GP:OFO25709.1;Name=OFO25709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746546.1;locus_tag=HMPREF3052_00980;product=RNA polymerase sigma factor RpoD;protein_id=OFO25709.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 76256 77608 . - . ID=gene-HMPREF3052_00985;Name=HMPREF3052_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00985 GCA_001815685.1|KV821587.1 Protein Homology CDS 76256 77608 . - 0 ID=cds-OFO25710.1;Parent=gene-HMPREF3052_00985;Dbxref=NCBI_GP:OFO25710.1;Name=OFO25710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746545.1;locus_tag=HMPREF3052_00985;product=poly(A) polymerase;protein_id=OFO25710.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 77826 78011 . + . ID=gene-HMPREF3052_00990;Name=HMPREF3052_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00990 GCA_001815685.1|KV821587.1 Protein Homology CDS 77826 78011 . + 0 ID=cds-OFO25711.1;Parent=gene-HMPREF3052_00990;Dbxref=NCBI_GP:OFO25711.1;Name=OFO25711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230667.1;locus_tag=HMPREF3052_00990;product=hypothetical protein;protein_id=OFO25711.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 78024 78692 . + . ID=gene-HMPREF3052_00995;Name=HMPREF3052_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_00995 GCA_001815685.1|KV821587.1 Protein Homology CDS 78024 78692 . + 0 ID=cds-OFO25712.1;Parent=gene-HMPREF3052_00995;Dbxref=NCBI_GP:OFO25712.1;Name=OFO25712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213029.1;locus_tag=HMPREF3052_00995;product=methyltransferase;protein_id=OFO25712.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 78707 79462 . + . ID=gene-HMPREF3052_01000;Name=HMPREF3052_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01000 GCA_001815685.1|KV821587.1 Protein Homology CDS 78707 79462 . + 0 ID=cds-OFO25713.1;Parent=gene-HMPREF3052_01000;Dbxref=NCBI_GP:OFO25713.1;Name=OFO25713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686295.1;locus_tag=HMPREF3052_01000;product=hypothetical protein;protein_id=OFO25713.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 79542 80027 . + . ID=gene-HMPREF3052_01005;Name=HMPREF3052_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01005 GCA_001815685.1|KV821587.1 Protein Homology CDS 79542 80027 . + 0 ID=cds-OFO25714.1;Parent=gene-HMPREF3052_01005;Dbxref=NCBI_GP:OFO25714.1;Name=OFO25714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746536.1;locus_tag=HMPREF3052_01005;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=OFO25714.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 80125 80457 . + . ID=gene-HMPREF3052_01010;Name=HMPREF3052_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01010 GCA_001815685.1|KV821587.1 Protein Homology CDS 80125 80457 . + 0 ID=cds-OFO25715.1;Parent=gene-HMPREF3052_01010;Dbxref=NCBI_GP:OFO25715.1;Name=OFO25715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680733.1;locus_tag=HMPREF3052_01010;product=hypothetical protein;protein_id=OFO25715.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 80540 82333 . - . ID=gene-HMPREF3052_01015;Name=HMPREF3052_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01015 GCA_001815685.1|KV821587.1 Protein Homology CDS 80540 82333 . - 0 ID=cds-OFO25716.1;Parent=gene-HMPREF3052_01015;Dbxref=NCBI_GP:OFO25716.1;Name=OFO25716.1;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778014.1;locus_tag=HMPREF3052_01015;product=2-isopropylmalate synthase;protein_id=OFO25716.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 82560 83675 . + . ID=gene-HMPREF3052_01020;Name=HMPREF3052_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01020 GCA_001815685.1|KV821587.1 Protein Homology CDS 82560 83675 . + 0 ID=cds-OFO25717.1;Parent=gene-HMPREF3052_01020;Dbxref=NCBI_GP:OFO25717.1;Name=OFO25717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520305.1;locus_tag=HMPREF3052_01020;product=methyltransferase;protein_id=OFO25717.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 83797 84270 . - . ID=gene-HMPREF3052_01025;Name=HMPREF3052_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01025 GCA_001815685.1|KV821587.1 Protein Homology CDS 83797 84270 . - 0 ID=cds-OFO25718.1;Parent=gene-HMPREF3052_01025;Dbxref=NCBI_GP:OFO25718.1;Name=OFO25718.1;Note=iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687569.1;locus_tag=HMPREF3052_01025;product=bacterioferritin;protein_id=OFO25718.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 84293 84757 . - . ID=gene-HMPREF3052_01030;Name=HMPREF3052_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01030 GCA_001815685.1|KV821587.1 Protein Homology CDS 84293 84757 . - 0 ID=cds-OFO25719.1;Parent=gene-HMPREF3052_01030;Dbxref=NCBI_GP:OFO25719.1;Name=OFO25719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675404.1;locus_tag=HMPREF3052_01030;product=bacterioferritin;protein_id=OFO25719.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 85177 86988 . + . ID=gene-HMPREF3052_01035;Name=HMPREF3052_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01035 GCA_001815685.1|KV821587.1 Protein Homology CDS 85177 86988 . + 0 ID=cds-OFO25720.1;Parent=gene-HMPREF3052_01035;Dbxref=NCBI_GP:OFO25720.1;Name=OFO25720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712017.1;locus_tag=HMPREF3052_01035;product=GTP-binding protein TypA;protein_id=OFO25720.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 87082 88059 . - . ID=gene-HMPREF3052_01040;Name=HMPREF3052_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01040 GCA_001815685.1|KV821587.1 Protein Homology CDS 87082 88059 . - 0 ID=cds-OFO25721.1;Parent=gene-HMPREF3052_01040;Dbxref=NCBI_GP:OFO25721.1;Name=OFO25721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686436.1;locus_tag=HMPREF3052_01040;product=AraC family transcriptional regulator;protein_id=OFO25721.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 88191 88526 . + . ID=gene-HMPREF3052_01045;Name=HMPREF3052_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01045 GCA_001815685.1|KV821587.1 Protein Homology CDS 88191 88526 . + 0 ID=cds-OFO25722.1;Parent=gene-HMPREF3052_01045;Dbxref=NCBI_GP:OFO25722.1;Name=OFO25722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341467.1;locus_tag=HMPREF3052_01045;product=hypothetical protein;protein_id=OFO25722.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 88639 89007 . + . ID=gene-HMPREF3052_01050;Name=HMPREF3052_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01050 GCA_001815685.1|KV821587.1 Protein Homology CDS 88639 89007 . + 0 ID=cds-OFO25723.1;Parent=gene-HMPREF3052_01050;Dbxref=NCBI_GP:OFO25723.1;Name=OFO25723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686323.1;locus_tag=HMPREF3052_01050;product=rhodanese-like domain-containing protein;protein_id=OFO25723.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 89063 89401 . - . ID=gene-HMPREF3052_01055;Name=HMPREF3052_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01055 GCA_001815685.1|KV821587.1 Protein Homology CDS 89063 89401 . - 0 ID=cds-OFO25724.1;Parent=gene-HMPREF3052_01055;Dbxref=NCBI_GP:OFO25724.1;Name=OFO25724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746515.1;locus_tag=HMPREF3052_01055;product=hypothetical protein;protein_id=OFO25724.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 89500 90255 . + . ID=gene-HMPREF3052_01060;Name=HMPREF3052_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01060 GCA_001815685.1|KV821587.1 Protein Homology CDS 89500 90255 . + 0 ID=cds-OFO25725.1;Parent=gene-HMPREF3052_01060;Dbxref=NCBI_GP:OFO25725.1;Name=OFO25725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520297.1;locus_tag=HMPREF3052_01060;product=5'/3'-nucleotidase SurE;protein_id=OFO25725.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 90349 91260 . + . ID=gene-HMPREF3052_01065;Name=HMPREF3052_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01065 GCA_001815685.1|KV821587.1 Protein Homology CDS 90349 91260 . + 0 ID=cds-OFO25726.1;Parent=gene-HMPREF3052_01065;Dbxref=NCBI_GP:OFO25726.1;Name=OFO25726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686291.1;locus_tag=HMPREF3052_01065;product=peptidoglycan-binding protein LysM;protein_id=OFO25726.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 91339 92862 . + . ID=gene-HMPREF3052_01070;Name=HMPREF3052_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01070 GCA_001815685.1|KV821587.1 Protein Homology CDS 91339 92862 . + 0 ID=cds-OFO25727.1;Parent=gene-HMPREF3052_01070;Dbxref=NCBI_GP:OFO25727.1;Name=OFO25727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746508.1;locus_tag=HMPREF3052_01070;product=hypothetical protein;protein_id=OFO25727.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 92906 93439 . + . ID=gene-HMPREF3052_01075;Name=HMPREF3052_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01075 GCA_001815685.1|KV821587.1 Protein Homology CDS 92906 93439 . + 0 ID=cds-OFO25728.1;Parent=gene-HMPREF3052_01075;Dbxref=NCBI_GP:OFO25728.1;Name=OFO25728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746505.1;locus_tag=HMPREF3052_01075;product=hypothetical protein;protein_id=OFO25728.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 93503 94411 . + . ID=gene-HMPREF3052_01080;Name=HMPREF3052_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01080 GCA_001815685.1|KV821587.1 Protein Homology CDS 93503 94411 . + 0 ID=cds-OFO25729.1;Parent=gene-HMPREF3052_01080;Dbxref=NCBI_GP:OFO25729.1;Name=OFO25729.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685602.1;locus_tag=HMPREF3052_01080;product=coproporphyrinogen III oxidase;protein_id=OFO25729.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 94603 95442 . + . ID=gene-HMPREF3052_01085;Name=HMPREF3052_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01085 GCA_001815685.1|KV821587.1 Protein Homology CDS 94603 95442 . + 0 ID=cds-OFO25730.1;Parent=gene-HMPREF3052_01085;Dbxref=NCBI_GP:OFO25730.1;Name=OFO25730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746502.1;locus_tag=HMPREF3052_01085;product=zinc metalloprotease HtpX;protein_id=OFO25730.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 95491 96306 . - . ID=gene-HMPREF3052_01090;Name=HMPREF3052_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01090 GCA_001815685.1|KV821587.1 Protein Homology CDS 95491 96306 . - 0 ID=cds-OFO25731.1;Parent=gene-HMPREF3052_01090;Dbxref=NCBI_GP:OFO25731.1;Name=OFO25731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685783.1;locus_tag=HMPREF3052_01090;product=squalene synthase HpnC;protein_id=OFO25731.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 96360 97082 . - . ID=gene-HMPREF3052_01095;Name=HMPREF3052_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01095 GCA_001815685.1|KV821587.1 Protein Homology CDS 96360 97082 . - 0 ID=cds-OFO25732.1;Parent=gene-HMPREF3052_01095;Dbxref=NCBI_GP:OFO25732.1;Name=OFO25732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519882.1;locus_tag=HMPREF3052_01095;product=cytidine deaminase;protein_id=OFO25732.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 97086 98027 . - . ID=gene-HMPREF3052_01100;Name=HMPREF3052_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01100 GCA_001815685.1|KV821587.1 Protein Homology CDS 97086 98027 . - 0 ID=cds-OFO25733.1;Parent=gene-HMPREF3052_01100;Dbxref=NCBI_GP:OFO25733.1;Name=OFO25733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519883.1;locus_tag=HMPREF3052_01100;product=tRNA dimethylallyltransferase;protein_id=OFO25733.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 98245 99297 . + . ID=gene-HMPREF3052_01105;Name=HMPREF3052_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01105 GCA_001815685.1|KV821587.1 Protein Homology CDS 98245 99297 . + 0 ID=cds-OFO25734.1;Parent=gene-HMPREF3052_01105;Dbxref=NCBI_GP:OFO25734.1;Name=OFO25734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582003.1;locus_tag=HMPREF3052_01105;product=biotin synthase BioB;protein_id=OFO25734.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 99347 100354 . - . ID=gene-HMPREF3052_01110;Name=HMPREF3052_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01110 GCA_001815685.1|KV821587.1 Protein Homology CDS 99347 100354 . - 0 ID=cds-OFO25735.1;Parent=gene-HMPREF3052_01110;Dbxref=NCBI_GP:OFO25735.1;Name=OFO25735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685769.1;locus_tag=HMPREF3052_01110;product=adenosine deaminase;protein_id=OFO25735.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 100432 101211 . - . ID=gene-HMPREF3052_01115;Name=HMPREF3052_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01115 GCA_001815685.1|KV821587.1 Protein Homology CDS 100432 101211 . - 0 ID=cds-OFO25736.1;Parent=gene-HMPREF3052_01115;Dbxref=NCBI_GP:OFO25736.1;Name=OFO25736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687762.1;locus_tag=HMPREF3052_01115;product=ferredoxin--NADP(+) reductase;protein_id=OFO25736.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 101310 101753 . - . ID=gene-HMPREF3052_01120;Name=HMPREF3052_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01120 GCA_001815685.1|KV821587.1 Protein Homology CDS 101310 101753 . - 0 ID=cds-OFO25737.1;Parent=gene-HMPREF3052_01120;Dbxref=NCBI_GP:OFO25737.1;Name=OFO25737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685718.1;locus_tag=HMPREF3052_01120;product=META domain-containing protein;protein_id=OFO25737.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 101824 102981 . - . ID=gene-HMPREF3052_01125;Name=HMPREF3052_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01125 GCA_001815685.1|KV821587.1 Protein Homology CDS 101824 102981 . - 0 ID=cds-OFO25738.1;Parent=gene-HMPREF3052_01125;Dbxref=NCBI_GP:OFO25738.1;Name=OFO25738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270119.1;locus_tag=HMPREF3052_01125;product=cystathionine gamma-synthase;protein_id=OFO25738.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 103160 103933 . + . ID=gene-HMPREF3052_01130;Name=HMPREF3052_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01130 GCA_001815685.1|KV821587.1 Protein Homology CDS 103160 103933 . + 0 ID=cds-OFO25739.1;Parent=gene-HMPREF3052_01130;Dbxref=NCBI_GP:OFO25739.1;Name=OFO25739.1;Note=similar protein in Methanocaldococcus converts GTP to 7%2C8-dihydro-D-neopterin 2'%2C3'-cyclic phosphate as the first step in methanopterin biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002243420.1;locus_tag=HMPREF3052_01130;product=GTP cyclohydrolase FolE2;protein_id=OFO25739.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 104149 105954 . + . ID=gene-HMPREF3052_01135;Name=HMPREF3052_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01135 GCA_001815685.1|KV821587.1 Protein Homology CDS 104149 105954 . + 0 ID=cds-OFO25740.1;Parent=gene-HMPREF3052_01135;Dbxref=NCBI_GP:OFO25740.1;Name=OFO25740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519891.1;locus_tag=HMPREF3052_01135;product=protein-disulfide reductase DsbD;protein_id=OFO25740.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 106016 107188 . - . ID=gene-HMPREF3052_01140;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=HMPREF3052_01140 GCA_001815685.1|KV821587.1 Protein Homology CDS 106016 107188 . - 0 ID=cds-OFO25741.1;Parent=gene-HMPREF3052_01140;Dbxref=NCBI_GP:OFO25741.1;Name=OFO25741.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746480.1;locus_tag=HMPREF3052_01140;product=alpha-hydroxy-acid oxidizing enzyme;protein_id=OFO25741.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 107550 107996 . + . ID=gene-HMPREF3052_01145;Name=HMPREF3052_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01145 GCA_001815685.1|KV821587.1 Protein Homology CDS 107550 107996 . + 0 ID=cds-OFO25742.1;Parent=gene-HMPREF3052_01145;Dbxref=NCBI_GP:OFO25742.1;Name=OFO25742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519894.1;locus_tag=HMPREF3052_01145;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=OFO25742.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 108048 109262 . + . ID=gene-HMPREF3052_01150;Name=HMPREF3052_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01150 GCA_001815685.1|KV821587.1 Protein Homology CDS 108048 109262 . + 0 ID=cds-OFO25743.1;Parent=gene-HMPREF3052_01150;Dbxref=NCBI_GP:OFO25743.1;Name=OFO25743.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687546.1;locus_tag=HMPREF3052_01150;product=cysteine desulfurase IscS;protein_id=OFO25743.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 109360 109809 . + . ID=gene-HMPREF3052_01155;Name=HMPREF3052_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01155 GCA_001815685.1|KV821587.1 GeneMarkS+ CDS 109360 109809 . + 0 ID=cds-OFO25744.1;Parent=gene-HMPREF3052_01155;Dbxref=NCBI_GP:OFO25744.1;Name=OFO25744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01155;product=hypothetical protein;protein_id=OFO25744.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 109838 110269 . + . ID=gene-HMPREF3052_01160;Name=HMPREF3052_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01160 GCA_001815685.1|KV821587.1 GeneMarkS+ CDS 109838 110269 . + 0 ID=cds-OFO25745.1;Parent=gene-HMPREF3052_01160;Dbxref=NCBI_GP:OFO25745.1;Name=OFO25745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01160;product=hypothetical protein;protein_id=OFO25745.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 110629 111015 . + . ID=gene-HMPREF3052_01165;Name=HMPREF3052_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01165 GCA_001815685.1|KV821587.1 Protein Homology CDS 110629 111015 . + 0 ID=cds-OFO25746.1;Parent=gene-HMPREF3052_01165;Dbxref=NCBI_GP:OFO25746.1;Name=OFO25746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674559.1;locus_tag=HMPREF3052_01165;product=scaffolding protein;protein_id=OFO25746.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 111266 111511 . + . ID=gene-HMPREF3052_01170;Name=HMPREF3052_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01170 GCA_001815685.1|KV821587.1 Protein Homology CDS 111266 111511 . + 0 ID=cds-OFO25747.1;Parent=gene-HMPREF3052_01170;Dbxref=NCBI_GP:OFO25747.1;Name=OFO25747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746468.1;locus_tag=HMPREF3052_01170;product=recombinase RecA;protein_id=OFO25747.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 111581 111901 . + . ID=gene-HMPREF3052_01175;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=HMPREF3052_01175 GCA_001815685.1|KV821587.1 Protein Homology CDS 111581 111901 . + 0 ID=cds-OFO25748.1;Parent=gene-HMPREF3052_01175;Dbxref=NCBI_GP:OFO25748.1;Name=OFO25748.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002932457.1;locus_tag=HMPREF3052_01175;product=iron-sulfur cluster assembly protein IscA;protein_id=OFO25748.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 111898 112083 . - . ID=gene-HMPREF3052_01180;Name=HMPREF3052_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01180 GCA_001815685.1|KV821587.1 Protein Homology CDS 111898 112083 . - 0 ID=cds-OFO25749.1;Parent=gene-HMPREF3052_01180;Dbxref=NCBI_GP:OFO25749.1;Name=OFO25749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712322.1;locus_tag=HMPREF3052_01180;product=hypothetical protein;protein_id=OFO25749.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 112163 112663 . + . ID=gene-HMPREF3052_01185;Name=HMPREF3052_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01185 GCA_001815685.1|KV821587.1 Protein Homology CDS 112163 112663 . + 0 ID=cds-OFO25750.1;Parent=gene-HMPREF3052_01185;Dbxref=NCBI_GP:OFO25750.1;Name=OFO25750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248857.1;locus_tag=HMPREF3052_01185;product=Fe-S protein assembly co-chaperone HscB;protein_id=OFO25750.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 112772 113344 . - . ID=gene-HMPREF3052_01190;Name=HMPREF3052_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01190 GCA_001815685.1|KV821587.1 Protein Homology CDS 112772 113344 . - 0 ID=cds-OFO25751.1;Parent=gene-HMPREF3052_01190;Dbxref=NCBI_GP:OFO25751.1;Name=OFO25751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755233.1;locus_tag=HMPREF3052_01190;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=OFO25751.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 113410 114435 . - . ID=gene-HMPREF3052_01195;Name=HMPREF3052_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01195 GCA_001815685.1|KV821587.1 Protein Homology CDS 113410 114435 . - 0 ID=cds-OFO25752.1;Parent=gene-HMPREF3052_01195;Dbxref=NCBI_GP:OFO25752.1;Name=OFO25752.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680786.1;locus_tag=HMPREF3052_01195;product=ribose-phosphate pyrophosphokinase;protein_id=OFO25752.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 114731 115579 . - . ID=gene-HMPREF3052_01200;Name=ipk;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=HMPREF3052_01200 GCA_001815685.1|KV821587.1 Protein Homology CDS 114731 115579 . - 0 ID=cds-OFO25594.1;Parent=gene-HMPREF3052_01200;Dbxref=NCBI_GP:OFO25594.1;Name=OFO25594.1;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;gbkey=CDS;gene=ipk;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778242.1;locus_tag=HMPREF3052_01200;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=OFO25594.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 115588 116172 . - . ID=gene-HMPREF3052_01205;Name=HMPREF3052_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01205 GCA_001815685.1|KV821587.1 Protein Homology CDS 115588 116172 . - 0 ID=cds-OFO25522.1;Parent=gene-HMPREF3052_01205;Dbxref=NCBI_GP:OFO25522.1;Name=OFO25522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746457.1;locus_tag=HMPREF3052_01205;product=lipoprotein localization factor LolB;protein_id=OFO25522.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 116229 118091 . - . ID=gene-HMPREF3052_01210;Name=HMPREF3052_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01210 GCA_001815685.1|KV821587.1 Protein Homology CDS 116229 118091 . - 0 ID=cds-OFO25523.1;Parent=gene-HMPREF3052_01210;Dbxref=NCBI_GP:OFO25523.1;Name=OFO25523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519906.1;locus_tag=HMPREF3052_01210;product=hypothetical protein;protein_id=OFO25523.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 118267 118872 . + . ID=gene-HMPREF3052_01215;Name=HMPREF3052_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01215 GCA_001815685.1|KV821587.1 Protein Homology CDS 118267 118872 . + 0 ID=cds-OFO25524.1;Parent=gene-HMPREF3052_01215;Dbxref=NCBI_GP:OFO25524.1;Name=OFO25524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519907.1;locus_tag=HMPREF3052_01215;product=coenzyme A pyrophosphatase;protein_id=OFO25524.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 119135 120427 . + . ID=gene-HMPREF3052_01220;Name=HMPREF3052_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01220 GCA_001815685.1|KV821587.1 Protein Homology CDS 119135 120427 . + 0 ID=cds-OFO25525.1;Parent=gene-HMPREF3052_01220;Dbxref=NCBI_GP:OFO25525.1;Name=OFO25525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685456.1;locus_tag=HMPREF3052_01220;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=OFO25525.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 120575 121621 . + . ID=gene-HMPREF3052_01225;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HMPREF3052_01225 GCA_001815685.1|KV821587.1 Protein Homology CDS 120575 121621 . + 0 ID=cds-OFO25526.1;Parent=gene-HMPREF3052_01225;Dbxref=NCBI_GP:OFO25526.1;Name=OFO25526.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KUQ0.1;locus_tag=HMPREF3052_01225;product=DNA recombination/repair protein RecA;protein_id=OFO25526.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 121718 122566 . - . ID=gene-HMPREF3052_01230;Name=HMPREF3052_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01230 GCA_001815685.1|KV821587.1 Protein Homology CDS 121718 122566 . - 0 ID=cds-OFO25527.1;Parent=gene-HMPREF3052_01230;Dbxref=NCBI_GP:OFO25527.1;Name=OFO25527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685412.1;locus_tag=HMPREF3052_01230;product=S-formylglutathione hydrolase;protein_id=OFO25527.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 123067 124779 . + . ID=gene-HMPREF3052_01235;Name=HMPREF3052_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01235 GCA_001815685.1|KV821587.1 Protein Homology CDS 123067 124779 . + 0 ID=cds-OFO25595.1;Parent=gene-HMPREF3052_01235;Dbxref=NCBI_GP:OFO25595.1;Name=OFO25595.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217025.1;locus_tag=HMPREF3052_01235;product=proline--tRNA ligase;protein_id=OFO25595.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 124846 125652 . - . ID=gene-HMPREF3052_01240;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF3052_01240 GCA_001815685.1|KV821587.1 Protein Homology CDS 124846 125652 . - 0 ID=cds-OFO25528.1;Parent=gene-HMPREF3052_01240;Dbxref=NCBI_GP:OFO25528.1;Name=OFO25528.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759661.1;locus_tag=HMPREF3052_01240;product=pyruvate formate lyase-activating enzyme 1;protein_id=OFO25528.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 125792 128077 . - . ID=gene-HMPREF3052_01245;Name=HMPREF3052_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01245 GCA_001815685.1|KV821587.1 Protein Homology CDS 125792 128077 . - 0 ID=cds-OFO25529.1;Parent=gene-HMPREF3052_01245;Dbxref=NCBI_GP:OFO25529.1;Name=OFO25529.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746444.1;locus_tag=HMPREF3052_01245;product=formate acetyltransferase;protein_id=OFO25529.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 128381 129679 . - . ID=gene-HMPREF3052_01250;Name=HMPREF3052_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01250 GCA_001815685.1|KV821587.1 Protein Homology CDS 128381 129679 . - 0 ID=cds-OFO25530.1;Parent=gene-HMPREF3052_01250;Dbxref=NCBI_GP:OFO25530.1;Name=OFO25530.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271936.1;locus_tag=HMPREF3052_01250;product=adenylosuccinate synthase;protein_id=OFO25530.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 129723 130880 . - . ID=gene-HMPREF3052_01255;Name=hisZ;gbkey=Gene;gene=hisZ;gene_biotype=protein_coding;locus_tag=HMPREF3052_01255 GCA_001815685.1|KV821587.1 Protein Homology CDS 129723 130880 . - 0 ID=cds-OFO25531.1;Parent=gene-HMPREF3052_01255;Dbxref=NCBI_GP:OFO25531.1;Name=OFO25531.1;Note=May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine;gbkey=CDS;gene=hisZ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680805.1;locus_tag=HMPREF3052_01255;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=OFO25531.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 131203 132006 . - . ID=gene-HMPREF3052_01260;Name=HMPREF3052_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01260 GCA_001815685.1|KV821587.1 Protein Homology CDS 131203 132006 . - 0 ID=cds-OFO25532.1;Parent=gene-HMPREF3052_01260;Dbxref=NCBI_GP:OFO25532.1;Name=OFO25532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343543.1;locus_tag=HMPREF3052_01260;product=competence protein ComL;protein_id=OFO25532.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 132005 133129 . + . ID=gene-HMPREF3052_01265;Name=HMPREF3052_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01265 GCA_001815685.1|KV821587.1 Protein Homology CDS 132005 133129 . + 0 ID=cds-OFO25533.1;Parent=gene-HMPREF3052_01265;Dbxref=NCBI_GP:OFO25533.1;Name=OFO25533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258136.1;locus_tag=HMPREF3052_01265;product=RNA pseudouridine synthase;protein_id=OFO25533.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 133211 133981 . + . ID=gene-HMPREF3052_01270;Name=HMPREF3052_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01270 GCA_001815685.1|KV821587.1 Protein Homology CDS 133211 133981 . + 0 ID=cds-OFO25534.1;Parent=gene-HMPREF3052_01270;Dbxref=NCBI_GP:OFO25534.1;Name=OFO25534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680808.1;locus_tag=HMPREF3052_01270;product=laccase;protein_id=OFO25534.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 134102 134581 . + . ID=gene-HMPREF3052_01275;Name=HMPREF3052_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01275 GCA_001815685.1|KV821587.1 Protein Homology CDS 134102 134581 . + 0 ID=cds-OFO25535.1;Parent=gene-HMPREF3052_01275;Dbxref=NCBI_GP:OFO25535.1;Name=OFO25535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746431.1;locus_tag=HMPREF3052_01275;product=hypothetical protein;protein_id=OFO25535.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 134581 135582 . + . ID=gene-HMPREF3052_01280;Name=HMPREF3052_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01280 GCA_001815685.1|KV821587.1 Protein Homology CDS 134581 135582 . + 0 ID=cds-OFO25536.1;Parent=gene-HMPREF3052_01280;Dbxref=NCBI_GP:OFO25536.1;Name=OFO25536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519926.1;locus_tag=HMPREF3052_01280;product=DNA polymerase III subunit delta;protein_id=OFO25536.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 135730 136149 . + . ID=gene-HMPREF3052_01285;Name=HMPREF3052_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01285 GCA_001815685.1|KV821587.1 Protein Homology CDS 135730 136149 . + 0 ID=cds-OFO25537.1;Parent=gene-HMPREF3052_01285;Dbxref=NCBI_GP:OFO25537.1;Name=OFO25537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238945.1;locus_tag=HMPREF3052_01285;product=hypothetical protein;protein_id=OFO25537.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 136241 136765 . + . ID=gene-HMPREF3052_01290;Name=HMPREF3052_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01290 GCA_001815685.1|KV821587.1 Protein Homology CDS 136241 136765 . + 0 ID=cds-OFO25538.1;Parent=gene-HMPREF3052_01290;Dbxref=NCBI_GP:OFO25538.1;Name=OFO25538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519927.1;locus_tag=HMPREF3052_01290;product=RDD family protein;protein_id=OFO25538.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 136860 138095 . - . ID=gene-HMPREF3052_01295;Name=HMPREF3052_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01295 GCA_001815685.1|KV821587.1 Protein Homology CDS 136860 138095 . - 0 ID=cds-OFO25539.1;Parent=gene-HMPREF3052_01295;Dbxref=NCBI_GP:OFO25539.1;Name=OFO25539.1;Note=FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685438.1;locus_tag=HMPREF3052_01295;product=beta-ketoacyl-ACP synthase II;protein_id=OFO25539.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 138089 138817 . - . ID=gene-HMPREF3052_01300;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF3052_01300 GCA_001815685.1|KV821587.1 Protein Homology CDS 138089 138817 . - 0 ID=cds-OFO25540.1;Parent=gene-HMPREF3052_01300;Dbxref=NCBI_GP:OFO25540.1;Name=OFO25540.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009424949.1;locus_tag=HMPREF3052_01300;product=beta-ketoacyl-ACP reductase;protein_id=OFO25540.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 138883 139308 . - . ID=gene-HMPREF3052_01305;Name=HMPREF3052_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01305 GCA_001815685.1|KV821587.1 Protein Homology CDS 138883 139308 . - 0 ID=cds-OFO25541.1;Parent=gene-HMPREF3052_01305;Dbxref=NCBI_GP:OFO25541.1;Name=OFO25541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519930.1;locus_tag=HMPREF3052_01305;product=thioester dehydrase;protein_id=OFO25541.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 139482 140243 . + . ID=gene-HMPREF3052_01310;Name=HMPREF3052_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01310 GCA_001815685.1|KV821587.1 Protein Homology CDS 139482 140243 . + 0 ID=cds-OFO25542.1;Parent=gene-HMPREF3052_01310;Dbxref=NCBI_GP:OFO25542.1;Name=OFO25542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746417.1;locus_tag=HMPREF3052_01310;product=3-oxoacyl-ACP synthase;protein_id=OFO25542.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 140240 140998 . + . ID=gene-HMPREF3052_01315;Name=HMPREF3052_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01315 GCA_001815685.1|KV821587.1 Protein Homology CDS 140240 140998 . + 0 ID=cds-OFO25543.1;Parent=gene-HMPREF3052_01315;Dbxref=NCBI_GP:OFO25543.1;Name=OFO25543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174185.1;locus_tag=HMPREF3052_01315;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFO25543.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 140995 141255 . + . ID=gene-HMPREF3052_01320;Name=HMPREF3052_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01320 GCA_001815685.1|KV821587.1 Protein Homology CDS 140995 141255 . + 0 ID=cds-OFO25544.1;Parent=gene-HMPREF3052_01320;Dbxref=NCBI_GP:OFO25544.1;Name=OFO25544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750043.1;locus_tag=HMPREF3052_01320;product=acyl carrier protein;protein_id=OFO25544.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 141268 141516 . + . ID=gene-HMPREF3052_01325;Name=HMPREF3052_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01325 GCA_001815685.1|KV821587.1 Protein Homology CDS 141268 141516 . + 0 ID=cds-OFO25545.1;Parent=gene-HMPREF3052_01325;Dbxref=NCBI_GP:OFO25545.1;Name=OFO25545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685738.1;locus_tag=HMPREF3052_01325;product=acyl carrier protein;protein_id=OFO25545.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 141589 142128 . + . ID=gene-HMPREF3052_01330;Name=HMPREF3052_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01330 GCA_001815685.1|KV821587.1 Protein Homology CDS 141589 142128 . + 0 ID=cds-OFO25546.1;Parent=gene-HMPREF3052_01330;Dbxref=NCBI_GP:OFO25546.1;Name=OFO25546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685546.1;locus_tag=HMPREF3052_01330;product=hypothetical protein;protein_id=OFO25546.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 142218 142991 . + . ID=gene-HMPREF3052_01335;Name=HMPREF3052_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01335 GCA_001815685.1|KV821587.1 GeneMarkS+ CDS 142218 142991 . + 0 ID=cds-OFO25547.1;Parent=gene-HMPREF3052_01335;Dbxref=NCBI_GP:OFO25547.1;Name=OFO25547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01335;product=hypothetical protein;protein_id=OFO25547.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 143025 144728 . + . ID=gene-HMPREF3052_01340;Name=HMPREF3052_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01340 GCA_001815685.1|KV821587.1 Protein Homology CDS 143025 144728 . + 0 ID=cds-OFO25548.1;Parent=gene-HMPREF3052_01340;Dbxref=NCBI_GP:OFO25548.1;Name=OFO25548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746409.1;locus_tag=HMPREF3052_01340;product=AMP-binding protein;protein_id=OFO25548.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 144765 145853 . + . ID=gene-HMPREF3052_01345;Name=HMPREF3052_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01345 GCA_001815685.1|KV821587.1 Protein Homology CDS 144765 145853 . + 0 ID=cds-OFO25549.1;Parent=gene-HMPREF3052_01345;Dbxref=NCBI_GP:OFO25549.1;Name=OFO25549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774630.1;locus_tag=HMPREF3052_01345;product=methyltransferase;protein_id=OFO25549.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 145945 146601 . - . ID=gene-HMPREF3052_01350;Name=HMPREF3052_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01350 GCA_001815685.1|KV821587.1 Protein Homology CDS 145945 146601 . - 0 ID=cds-OFO25550.1;Parent=gene-HMPREF3052_01350;Dbxref=NCBI_GP:OFO25550.1;Name=OFO25550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519936.1;locus_tag=HMPREF3052_01350;product=nickel-dependent hydrogenase b-type cytochrome subunit;protein_id=OFO25550.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 146655 147536 . + . ID=gene-HMPREF3052_01355;Name=HMPREF3052_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01355 GCA_001815685.1|KV821587.1 Protein Homology CDS 146655 147536 . + 0 ID=cds-OFO25551.1;Parent=gene-HMPREF3052_01355;Dbxref=NCBI_GP:OFO25551.1;Name=OFO25551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519937.1;locus_tag=HMPREF3052_01355;product=NAD(P)H-hydrate dehydratase;protein_id=OFO25551.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 147686 148633 . + . ID=gene-HMPREF3052_01360;Name=HMPREF3052_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01360 GCA_001815685.1|KV821587.1 Protein Homology CDS 147686 148633 . + 0 ID=cds-OFO25552.1;Parent=gene-HMPREF3052_01360;Dbxref=NCBI_GP:OFO25552.1;Name=OFO25552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519938.1;locus_tag=HMPREF3052_01360;product=sodium transporter;protein_id=OFO25552.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 148703 149266 . - . ID=gene-HMPREF3052_01365;Name=HMPREF3052_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01365 GCA_001815685.1|KV821587.1 Protein Homology CDS 148703 149266 . - 0 ID=cds-OFO25553.1;Parent=gene-HMPREF3052_01365;Dbxref=NCBI_GP:OFO25553.1;Name=OFO25553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311439.1;locus_tag=HMPREF3052_01365;product=hypothetical protein;protein_id=OFO25553.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 149545 151404 . + . ID=gene-HMPREF3052_01370;Name=HMPREF3052_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01370 GCA_001815685.1|KV821587.1 Protein Homology CDS 149545 151404 . + 0 ID=cds-OFO25554.1;Parent=gene-HMPREF3052_01370;Dbxref=NCBI_GP:OFO25554.1;Name=OFO25554.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448882.1;locus_tag=HMPREF3052_01370;product=dihydroxy-acid dehydratase;protein_id=OFO25554.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 151673 152962 . + . ID=gene-HMPREF3052_01375;Name=HMPREF3052_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01375 GCA_001815685.1|KV821587.1 Protein Homology CDS 151673 152962 . + 0 ID=cds-OFO25555.1;Parent=gene-HMPREF3052_01375;Dbxref=NCBI_GP:OFO25555.1;Name=OFO25555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746395.1;locus_tag=HMPREF3052_01375;product=serine protease;protein_id=OFO25555.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 153039 153272 . + . ID=gene-HMPREF3052_01380;Name=HMPREF3052_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01380 GCA_001815685.1|KV821587.1 Protein Homology CDS 153039 153272 . + 0 ID=cds-OFO25556.1;Parent=gene-HMPREF3052_01380;Dbxref=NCBI_GP:OFO25556.1;Name=OFO25556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746394.1;locus_tag=HMPREF3052_01380;product=cytochrome b6;protein_id=OFO25556.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 153274 153705 . + . ID=gene-HMPREF3052_01385;Name=HMPREF3052_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01385 GCA_001815685.1|KV821587.1 Protein Homology CDS 153274 153705 . + 0 ID=cds-OFO25557.1;Parent=gene-HMPREF3052_01385;Dbxref=NCBI_GP:OFO25557.1;Name=OFO25557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746392.1;locus_tag=HMPREF3052_01385;product=hypothetical protein;protein_id=OFO25557.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 153743 154090 . + . ID=gene-HMPREF3052_01390;Name=HMPREF3052_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01390 GCA_001815685.1|KV821587.1 Protein Homology CDS 153743 154090 . + 0 ID=cds-OFO25596.1;Parent=gene-HMPREF3052_01390;Dbxref=NCBI_GP:OFO25596.1;Name=OFO25596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685489.1;locus_tag=HMPREF3052_01390;product=ribonuclease Z;protein_id=OFO25596.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 154120 154857 . + . ID=gene-HMPREF3052_01395;Name=HMPREF3052_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01395 GCA_001815685.1|KV821587.1 Protein Homology CDS 154120 154857 . + 0 ID=cds-OFO25558.1;Parent=gene-HMPREF3052_01395;Dbxref=NCBI_GP:OFO25558.1;Name=OFO25558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173436.1;locus_tag=HMPREF3052_01395;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=OFO25558.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 155022 156152 . - . ID=gene-HMPREF3052_01400;Name=HMPREF3052_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01400 GCA_001815685.1|KV821587.1 Protein Homology CDS 155022 156152 . - 0 ID=cds-OFO25559.1;Parent=gene-HMPREF3052_01400;Dbxref=NCBI_GP:OFO25559.1;Name=OFO25559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685623.1;locus_tag=HMPREF3052_01400;product=polyamine ABC transporter substrate-binding protein;protein_id=OFO25559.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 156403 159306 . + . ID=gene-HMPREF3052_01405;Name=HMPREF3052_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01405 GCA_001815685.1|KV821587.1 Protein Homology CDS 156403 159306 . + 0 ID=cds-OFO25560.1;Parent=gene-HMPREF3052_01405;Dbxref=NCBI_GP:OFO25560.1;Name=OFO25560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746382.1;locus_tag=HMPREF3052_01405;product=alanine--tRNA ligase;protein_id=OFO25560.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 159440 160336 . + . ID=gene-HMPREF3052_01410;Name=HMPREF3052_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01410 GCA_001815685.1|KV821587.1 GeneMarkS+ CDS 159440 160336 . + 0 ID=cds-OFO25561.1;Parent=gene-HMPREF3052_01410;Dbxref=NCBI_GP:OFO25561.1;Name=OFO25561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01410;product=hypothetical protein;protein_id=OFO25561.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 160486 161175 . + . ID=gene-HMPREF3052_01415;Name=HMPREF3052_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01415 GCA_001815685.1|KV821587.1 GeneMarkS+ CDS 160486 161175 . + 0 ID=cds-OFO25562.1;Parent=gene-HMPREF3052_01415;Dbxref=NCBI_GP:OFO25562.1;Name=OFO25562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01415;product=hypothetical protein;protein_id=OFO25562.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 161499 162356 . - . ID=gene-HMPREF3052_01420;Name=HMPREF3052_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01420 GCA_001815685.1|KV821587.1 Protein Homology CDS 161499 162356 . - 0 ID=cds-OFO25563.1;Parent=gene-HMPREF3052_01420;Dbxref=NCBI_GP:OFO25563.1;Name=OFO25563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519954.1;locus_tag=HMPREF3052_01420;product=tRNA-modifying protein;protein_id=OFO25563.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 162479 163042 . - . ID=gene-HMPREF3052_01425;Name=HMPREF3052_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01425 GCA_001815685.1|KV821587.1 Protein Homology CDS 162479 163042 . - 0 ID=cds-OFO25564.1;Parent=gene-HMPREF3052_01425;Dbxref=NCBI_GP:OFO25564.1;Name=OFO25564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685516.1;locus_tag=HMPREF3052_01425;product=peptidylprolyl isomerase;protein_id=OFO25564.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 163242 165464 . - . ID=gene-HMPREF3052_01430;Name=HMPREF3052_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01430 GCA_001815685.1|KV821587.1 Protein Homology CDS 163242 165464 . - 0 ID=cds-OFO25565.1;Parent=gene-HMPREF3052_01430;Dbxref=NCBI_GP:OFO25565.1;Name=OFO25565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685727.1;locus_tag=HMPREF3052_01430;product=ligand-gated channel protein;protein_id=OFO25565.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 165699 167465 . + . ID=gene-HMPREF3052_01435;Name=HMPREF3052_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01435 GCA_001815685.1|KV821587.1 Protein Homology CDS 165699 167465 . + 0 ID=cds-OFO25566.1;Parent=gene-HMPREF3052_01435;Dbxref=NCBI_GP:OFO25566.1;Name=OFO25566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519957.1;locus_tag=HMPREF3052_01435;product=ABC transporter permease;protein_id=OFO25566.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 167611 168336 . + . ID=gene-HMPREF3052_01440;Name=HMPREF3052_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01440 GCA_001815685.1|KV821587.1 Protein Homology CDS 167611 168336 . + 0 ID=cds-OFO25567.1;Parent=gene-HMPREF3052_01440;Dbxref=NCBI_GP:OFO25567.1;Name=OFO25567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679748.1;locus_tag=HMPREF3052_01440;product=glycosyl transferase;protein_id=OFO25567.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 168341 169270 . + . ID=gene-HMPREF3052_01445;Name=HMPREF3052_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01445 GCA_001815685.1|KV821587.1 Protein Homology CDS 168341 169270 . + 0 ID=cds-OFO25568.1;Parent=gene-HMPREF3052_01445;Dbxref=NCBI_GP:OFO25568.1;Name=OFO25568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685675.1;locus_tag=HMPREF3052_01445;product=glycosyl transferase family 2;protein_id=OFO25568.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 169297 169734 . + . ID=gene-HMPREF3052_01450;Name=HMPREF3052_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01450 GCA_001815685.1|KV821587.1 Protein Homology CDS 169297 169734 . + 0 ID=cds-OFO25569.1;Parent=gene-HMPREF3052_01450;Dbxref=NCBI_GP:OFO25569.1;Name=OFO25569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679750.1;locus_tag=HMPREF3052_01450;product=4-hydroxybenzoyl-CoA thioesterase;protein_id=OFO25569.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 169838 171217 . + . ID=gene-HMPREF3052_01455;Name=HMPREF3052_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01455 GCA_001815685.1|KV821587.1 Protein Homology CDS 169838 171217 . + 0 ID=cds-OFO25570.1;Parent=gene-HMPREF3052_01455;Dbxref=NCBI_GP:OFO25570.1;Name=OFO25570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256528.1;locus_tag=HMPREF3052_01455;product=multidrug efflux MATE transporter NorM;protein_id=OFO25570.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 171288 172328 . + . ID=gene-HMPREF3052_01460;Name=HMPREF3052_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01460 GCA_001815685.1|KV821587.1 Protein Homology CDS 171288 172328 . + 0 ID=cds-OFO25571.1;Parent=gene-HMPREF3052_01460;Dbxref=NCBI_GP:OFO25571.1;Name=OFO25571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271933.1;locus_tag=HMPREF3052_01460;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=OFO25571.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 172347 172988 . + . ID=gene-HMPREF3052_01465;Name=HMPREF3052_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01465 GCA_001815685.1|KV821587.1 Protein Homology CDS 172347 172988 . + 0 ID=cds-OFO25572.1;Parent=gene-HMPREF3052_01465;Dbxref=NCBI_GP:OFO25572.1;Name=OFO25572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685695.1;locus_tag=HMPREF3052_01465;product=TetR family transcriptional regulator;protein_id=OFO25572.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 173079 173852 . + . ID=gene-HMPREF3052_01470;Name=HMPREF3052_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01470 GCA_001815685.1|KV821587.1 Protein Homology CDS 173079 173852 . + 0 ID=cds-OFO25573.1;Parent=gene-HMPREF3052_01470;Dbxref=NCBI_GP:OFO25573.1;Name=OFO25573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519966.1;locus_tag=HMPREF3052_01470;product=NAD(P)-dependent oxidoreductase;protein_id=OFO25573.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 173903 174475 . + . ID=gene-HMPREF3052_01475;Name=HMPREF3052_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01475 GCA_001815685.1|KV821587.1 Protein Homology CDS 173903 174475 . + 0 ID=cds-OFO25574.1;Parent=gene-HMPREF3052_01475;Dbxref=NCBI_GP:OFO25574.1;Name=OFO25574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746353.1;locus_tag=HMPREF3052_01475;product=hypothetical protein;protein_id=OFO25574.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 174503 175393 . + . ID=gene-HMPREF3052_01480;Name=HMPREF3052_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01480 GCA_001815685.1|KV821587.1 Protein Homology CDS 174503 175393 . + 0 ID=cds-OFO25575.1;Parent=gene-HMPREF3052_01480;Dbxref=NCBI_GP:OFO25575.1;Name=OFO25575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688388.1;locus_tag=HMPREF3052_01480;product=NAD(+) kinase;protein_id=OFO25575.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 175418 175723 . + . ID=gene-HMPREF3052_01485;Name=HMPREF3052_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01485 GCA_001815685.1|KV821587.1 Protein Homology CDS 175418 175723 . + 0 ID=cds-OFO25576.1;Parent=gene-HMPREF3052_01485;Dbxref=NCBI_GP:OFO25576.1;Name=OFO25576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752736.1;locus_tag=HMPREF3052_01485;product=hypothetical protein;protein_id=OFO25576.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 175976 178453 . + . ID=gene-HMPREF3052_01490;Name=HMPREF3052_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01490 GCA_001815685.1|KV821587.1 Protein Homology CDS 175976 178453 . + 0 ID=cds-OFO25577.1;Parent=gene-HMPREF3052_01490;Dbxref=NCBI_GP:OFO25577.1;Name=OFO25577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685693.1;locus_tag=HMPREF3052_01490;product=TonB-dependent receptor;protein_id=OFO25577.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 178626 179927 . - . ID=gene-HMPREF3052_01495;Name=HMPREF3052_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01495 GCA_001815685.1|KV821587.1 Protein Homology CDS 178626 179927 . - 0 ID=cds-OFO25578.1;Parent=gene-HMPREF3052_01495;Dbxref=NCBI_GP:OFO25578.1;Name=OFO25578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679774.1;locus_tag=HMPREF3052_01495;product=hypothetical protein;protein_id=OFO25578.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 180029 181336 . - . ID=gene-HMPREF3052_01500;Name=HMPREF3052_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01500 GCA_001815685.1|KV821587.1 Protein Homology CDS 180029 181336 . - 0 ID=cds-OFO25579.1;Parent=gene-HMPREF3052_01500;Dbxref=NCBI_GP:OFO25579.1;Name=OFO25579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006463523.1;locus_tag=HMPREF3052_01500;product=recombination factor protein RarA;protein_id=OFO25579.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 181488 181862 . + . ID=gene-HMPREF3052_01505;Name=HMPREF3052_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01505 GCA_001815685.1|KV821587.1 Protein Homology CDS 181488 181862 . + 0 ID=cds-OFO25580.1;Parent=gene-HMPREF3052_01505;Dbxref=NCBI_GP:OFO25580.1;Name=OFO25580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519975.1;locus_tag=HMPREF3052_01505;product=hypothetical protein;protein_id=OFO25580.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 181949 183358 . + . ID=gene-HMPREF3052_01510;Name=HMPREF3052_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01510 GCA_001815685.1|KV821587.1 Protein Homology CDS 181949 183358 . + 0 ID=cds-OFO25581.1;Parent=gene-HMPREF3052_01510;Dbxref=NCBI_GP:OFO25581.1;Name=OFO25581.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242742.1;locus_tag=HMPREF3052_01510;product=threonine synthase;protein_id=OFO25581.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 183587 185353 . + . ID=gene-HMPREF3052_01515;Name=HMPREF3052_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01515 GCA_001815685.1|KV821587.1 Protein Homology CDS 183587 185353 . + 0 ID=cds-OFO25582.1;Parent=gene-HMPREF3052_01515;Dbxref=NCBI_GP:OFO25582.1;Name=OFO25582.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746332.1;locus_tag=HMPREF3052_01515;product=lipid ABC transporter permease/ATP-binding protein;protein_id=OFO25582.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 185439 186215 . + . ID=gene-HMPREF3052_01520;Name=HMPREF3052_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01520 GCA_001815685.1|KV821587.1 Protein Homology CDS 185439 186215 . + 0 ID=cds-OFO25583.1;Parent=gene-HMPREF3052_01520;Dbxref=NCBI_GP:OFO25583.1;Name=OFO25583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575386.1;locus_tag=HMPREF3052_01520;product=ferredoxin--NADP(+) reductase;protein_id=OFO25583.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 186287 188410 . + . ID=gene-HMPREF3052_01525;Name=HMPREF3052_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01525 GCA_001815685.1|KV821587.1 Protein Homology CDS 186287 188410 . + 0 ID=cds-OFO25584.1;Parent=gene-HMPREF3052_01525;Dbxref=NCBI_GP:OFO25584.1;Name=OFO25584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679794.1;locus_tag=HMPREF3052_01525;product=uroporphyrinogen-III synthase;protein_id=OFO25584.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 188407 189630 . + . ID=gene-HMPREF3052_01530;Name=HMPREF3052_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01530 GCA_001815685.1|KV821587.1 Protein Homology CDS 188407 189630 . + 0 ID=cds-OFO25585.1;Parent=gene-HMPREF3052_01530;Dbxref=NCBI_GP:OFO25585.1;Name=OFO25585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519980.1;locus_tag=HMPREF3052_01530;product=heme biosynthesis protein HemY;protein_id=OFO25585.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 189766 190827 . + . ID=gene-HMPREF3052_01535;Name=HMPREF3052_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01535 GCA_001815685.1|KV821587.1 Protein Homology CDS 189766 190827 . + 0 ID=cds-OFO25586.1;Parent=gene-HMPREF3052_01535;Dbxref=NCBI_GP:OFO25586.1;Name=OFO25586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685476.1;locus_tag=HMPREF3052_01535;product=uroporphyrinogen decarboxylase;protein_id=OFO25586.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 190973 192466 . + . ID=gene-HMPREF3052_01540;Name=HMPREF3052_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01540 GCA_001815685.1|KV821587.1 Protein Homology CDS 190973 192466 . + 0 ID=cds-OFO25587.1;Parent=gene-HMPREF3052_01540;Dbxref=NCBI_GP:OFO25587.1;Name=OFO25587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746320.1;locus_tag=HMPREF3052_01540;product=cardiolipin synthase;protein_id=OFO25587.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 192732 192926 . + . ID=gene-HMPREF3052_01545;Name=HMPREF3052_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01545 GCA_001815685.1|KV821587.1 Protein Homology CDS 192732 192926 . + 0 ID=cds-OFO25588.1;Parent=gene-HMPREF3052_01545;Dbxref=NCBI_GP:OFO25588.1;Name=OFO25588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746314.1;locus_tag=HMPREF3052_01545;product=hypothetical protein;protein_id=OFO25588.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 192939 193460 . + . ID=gene-HMPREF3052_01550;Name=HMPREF3052_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01550 GCA_001815685.1|KV821587.1 Protein Homology CDS 192939 193460 . + 0 ID=cds-OFO25589.1;Parent=gene-HMPREF3052_01550;Dbxref=NCBI_GP:OFO25589.1;Name=OFO25589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685562.1;locus_tag=HMPREF3052_01550;product=hypothetical protein;protein_id=OFO25589.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 193540 193842 . + . ID=gene-HMPREF3052_01555;Name=HMPREF3052_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01555 GCA_001815685.1|KV821587.1 Protein Homology CDS 193540 193842 . + 0 ID=cds-OFO25590.1;Parent=gene-HMPREF3052_01555;Dbxref=NCBI_GP:OFO25590.1;Name=OFO25590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685756.1;locus_tag=HMPREF3052_01555;product=transcriptional regulator;protein_id=OFO25590.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 193934 194275 . - . ID=gene-HMPREF3052_01560;Name=HMPREF3052_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01560 GCA_001815685.1|KV821587.1 Protein Homology CDS 193934 194275 . - 0 ID=cds-OFO25591.1;Parent=gene-HMPREF3052_01560;Dbxref=NCBI_GP:OFO25591.1;Name=OFO25591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523067.1;locus_tag=HMPREF3052_01560;product=hypothetical protein;protein_id=OFO25591.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank pseudogene 194423 194614 . + . ID=gene-HMPREF3052_01565;Name=HMPREF3052_01565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_01565;pseudo=true GCA_001815685.1|KV821587.1 Protein Homology CDS 194423 194614 . + 0 ID=cds-HMPREF3052_01565;Parent=gene-HMPREF3052_01565;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003708790.1;locus_tag=HMPREF3052_01565;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 194734 195549 . - . ID=gene-HMPREF3052_01570;Name=HMPREF3052_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01570 GCA_001815685.1|KV821587.1 Protein Homology CDS 194734 195549 . - 0 ID=cds-OFO25592.1;Parent=gene-HMPREF3052_01570;Dbxref=NCBI_GP:OFO25592.1;Name=OFO25592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687998.1;locus_tag=HMPREF3052_01570;product=hypothetical protein;protein_id=OFO25592.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 195867 199550 . - . ID=gene-HMPREF3052_01575;Name=HMPREF3052_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01575 GCA_001815685.1|KV821587.1 Protein Homology CDS 195867 199550 . - 0 ID=cds-OFO25593.1;Parent=gene-HMPREF3052_01575;Dbxref=NCBI_GP:OFO25593.1;Name=OFO25593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003692981.1;locus_tag=HMPREF3052_01575;product=transcription-repair coupling factor;protein_id=OFO25593.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 199810 200502 . - . ID=gene-HMPREF3052_01580;Name=HMPREF3052_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01580 GCA_001815685.1|KV821587.1 Protein Homology CDS 199810 200502 . - 0 ID=cds-OFO25468.1;Parent=gene-HMPREF3052_01580;Dbxref=NCBI_GP:OFO25468.1;Name=OFO25468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173735.1;locus_tag=HMPREF3052_01580;product=hypothetical protein;protein_id=OFO25468.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 201138 201338 . + . ID=gene-HMPREF3052_01585;Name=HMPREF3052_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01585 GCA_001815685.1|KV821587.1 Protein Homology CDS 201138 201338 . + 0 ID=cds-OFO25469.1;Parent=gene-HMPREF3052_01585;Dbxref=NCBI_GP:OFO25469.1;Name=OFO25469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765401.1;locus_tag=HMPREF3052_01585;product=hypothetical protein;protein_id=OFO25469.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 201428 202825 . + . ID=gene-HMPREF3052_01590;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=HMPREF3052_01590 GCA_001815685.1|KV821587.1 Protein Homology CDS 201428 202825 . + 0 ID=cds-OFO25470.1;Parent=gene-HMPREF3052_01590;Dbxref=NCBI_GP:OFO25470.1;Name=OFO25470.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311384.1;locus_tag=HMPREF3052_01590;product=aspartate ammonia-lyase;protein_id=OFO25470.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 203083 203745 . + . ID=gene-HMPREF3052_01595;Name=HMPREF3052_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01595 GCA_001815685.1|KV821587.1 Protein Homology CDS 203083 203745 . + 0 ID=cds-OFO25471.1;Parent=gene-HMPREF3052_01595;Dbxref=NCBI_GP:OFO25471.1;Name=OFO25471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685629.1;locus_tag=HMPREF3052_01595;product=NAD(P)H-dependent oxidoreductase;protein_id=OFO25471.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 203925 206126 . - . ID=gene-HMPREF3052_01600;Name=HMPREF3052_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01600 GCA_001815685.1|KV821587.1 Protein Homology CDS 203925 206126 . - 0 ID=cds-OFO25472.1;Parent=gene-HMPREF3052_01600;Dbxref=NCBI_GP:OFO25472.1;Name=OFO25472.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685782.1;locus_tag=HMPREF3052_01600;product=outer membrane receptor protein;protein_id=OFO25472.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 206358 206576 . - . ID=gene-HMPREF3052_01605;Name=HMPREF3052_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01605 GCA_001815685.1|KV821587.1 Protein Homology CDS 206358 206576 . - 0 ID=cds-OFO25473.1;Parent=gene-HMPREF3052_01605;Dbxref=NCBI_GP:OFO25473.1;Name=OFO25473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234845.1;locus_tag=HMPREF3052_01605;product=hypothetical protein;protein_id=OFO25473.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 206798 207169 . + . ID=gene-HMPREF3052_01610;Name=HMPREF3052_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01610 GCA_001815685.1|KV821587.1 Protein Homology CDS 206798 207169 . + 0 ID=cds-OFO25474.1;Parent=gene-HMPREF3052_01610;Dbxref=NCBI_GP:OFO25474.1;Name=OFO25474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678612.1;locus_tag=HMPREF3052_01610;product=hypothetical protein;protein_id=OFO25474.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 207303 208553 . + . ID=gene-HMPREF3052_01615;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=HMPREF3052_01615 GCA_001815685.1|KV821587.1 Protein Homology CDS 207303 208553 . + 0 ID=cds-OFO25475.1;Parent=gene-HMPREF3052_01615;Dbxref=NCBI_GP:OFO25475.1;Name=OFO25475.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520001.1;locus_tag=HMPREF3052_01615;product=serine hydroxymethyltransferase;protein_id=OFO25475.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 208626 208919 . - . ID=gene-HMPREF3052_01620;Name=HMPREF3052_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01620 GCA_001815685.1|KV821587.1 GeneMarkS+ CDS 208626 208919 . - 0 ID=cds-OFO25476.1;Parent=gene-HMPREF3052_01620;Dbxref=NCBI_GP:OFO25476.1;Name=OFO25476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01620;product=hypothetical protein;protein_id=OFO25476.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 209049 209963 . - . ID=gene-HMPREF3052_01625;Name=HMPREF3052_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01625 GCA_001815685.1|KV821587.1 Protein Homology CDS 209049 209963 . - 0 ID=cds-OFO25481.1;Parent=gene-HMPREF3052_01625;Dbxref=NCBI_GP:OFO25481.1;Name=OFO25481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746280.1;locus_tag=HMPREF3052_01625;product=aromatic amino acid transporter;protein_id=OFO25481.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 210146 210571 . + . ID=gene-HMPREF3052_01630;Name=HMPREF3052_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01630 GCA_001815685.1|KV821587.1 Protein Homology CDS 210146 210571 . + 0 ID=cds-OFO25477.1;Parent=gene-HMPREF3052_01630;Dbxref=NCBI_GP:OFO25477.1;Name=OFO25477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678621.1;locus_tag=HMPREF3052_01630;product=MarR family transcriptional regulator;protein_id=OFO25477.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank pseudogene 210583 211451 . + . ID=gene-HMPREF3052_01635;Name=HMPREF3052_01635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_01635;pseudo=true GCA_001815685.1|KV821587.1 Protein Homology CDS 210583 211451 . + 0 ID=cds-HMPREF3052_01635;Parent=gene-HMPREF3052_01635;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685560.1;locus_tag=HMPREF3052_01635;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 211479 211802 . + . ID=gene-HMPREF3052_01640;Name=HMPREF3052_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01640 GCA_001815685.1|KV821587.1 Protein Homology CDS 211479 211802 . + 0 ID=cds-OFO25478.1;Parent=gene-HMPREF3052_01640;Dbxref=NCBI_GP:OFO25478.1;Name=OFO25478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520006.1;locus_tag=HMPREF3052_01640;product=hypothetical protein;protein_id=OFO25478.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 212328 212834 . + . ID=gene-HMPREF3052_01645;Name=HMPREF3052_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01645 GCA_001815685.1|KV821587.1 Protein Homology CDS 212328 212834 . + 0 ID=cds-OFO25479.1;Parent=gene-HMPREF3052_01645;Dbxref=NCBI_GP:OFO25479.1;Name=OFO25479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685697.1;locus_tag=HMPREF3052_01645;product=hypothetical protein;protein_id=OFO25479.1;transl_table=11 GCA_001815685.1|KV821587.1 Genbank gene 212925 213512 . + . ID=gene-HMPREF3052_01650;Name=HMPREF3052_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01650 GCA_001815685.1|KV821587.1 Protein Homology CDS 212925 213512 . + 0 ID=cds-OFO25480.1;Parent=gene-HMPREF3052_01650;Dbxref=NCBI_GP:OFO25480.1;Name=OFO25480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580810.1;locus_tag=HMPREF3052_01650;product=hypothetical protein;protein_id=OFO25480.1;transl_table=11 ##sequence-region KV821588.1 1 93826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821588.1 Genbank region 1 93826 . + . ID=KV821588.1:1..93826;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821588.1 Genbank gene 288 521 . - . ID=gene-HMPREF3052_01655;Name=HMPREF3052_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01655 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 288 521 . - 0 ID=cds-OFO25417.1;Parent=gene-HMPREF3052_01655;Dbxref=NCBI_GP:OFO25417.1;Name=OFO25417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01655;product=hypothetical protein;protein_id=OFO25417.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 567 770 . - . ID=gene-HMPREF3052_01660;Name=HMPREF3052_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01660 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 567 770 . - 0 ID=cds-OFO25418.1;Parent=gene-HMPREF3052_01660;Dbxref=NCBI_GP:OFO25418.1;Name=OFO25418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01660;product=hypothetical protein;protein_id=OFO25418.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 868 1074 . - . ID=gene-HMPREF3052_01665;Name=HMPREF3052_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01665 GCA_001815685.1|KV821588.1 Protein Homology CDS 868 1074 . - 0 ID=cds-OFO25419.1;Parent=gene-HMPREF3052_01665;Dbxref=NCBI_GP:OFO25419.1;Name=OFO25419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389443.1;locus_tag=HMPREF3052_01665;product=transcriptional regulator;protein_id=OFO25419.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 1067 1555 . - . ID=gene-HMPREF3052_01670;Name=HMPREF3052_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01670 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 1067 1555 . - 0 ID=cds-OFO25420.1;Parent=gene-HMPREF3052_01670;Dbxref=NCBI_GP:OFO25420.1;Name=OFO25420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01670;product=hypothetical protein;protein_id=OFO25420.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 1548 1781 . - . ID=gene-HMPREF3052_01675;Name=HMPREF3052_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01675 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 1548 1781 . - 0 ID=cds-OFO25421.1;Parent=gene-HMPREF3052_01675;Dbxref=NCBI_GP:OFO25421.1;Name=OFO25421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01675;product=hypothetical protein;protein_id=OFO25421.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 1866 2240 . - . ID=gene-HMPREF3052_01680;Name=HMPREF3052_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01680 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 1866 2240 . - 0 ID=cds-OFO25422.1;Parent=gene-HMPREF3052_01680;Dbxref=NCBI_GP:OFO25422.1;Name=OFO25422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01680;product=hypothetical protein;protein_id=OFO25422.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 2503 2587 . - . ID=gene-HMPREF3052_01685;Name=HMPREF3052_01685;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_01685 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 2503 2587 . - . ID=rna-HMPREF3052_01685;Parent=gene-HMPREF3052_01685;anticodon=(pos:complement(2551..2553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01685;product=tRNA-Leu GCA_001815685.1|KV821588.1 tRNAscan-SE exon 2503 2587 . - . ID=exon-HMPREF3052_01685-1;Parent=rna-HMPREF3052_01685;anticodon=(pos:complement(2551..2553));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01685;product=tRNA-Leu GCA_001815685.1|KV821588.1 Genbank gene 2749 3414 . + . ID=gene-HMPREF3052_01690;Name=HMPREF3052_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01690 GCA_001815685.1|KV821588.1 Protein Homology CDS 2749 3414 . + 0 ID=cds-OFO25423.1;Parent=gene-HMPREF3052_01690;Dbxref=NCBI_GP:OFO25423.1;Name=OFO25423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744158.1;locus_tag=HMPREF3052_01690;product=hypothetical protein;protein_id=OFO25423.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 3407 4000 . + . ID=gene-HMPREF3052_01695;Name=HMPREF3052_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01695 GCA_001815685.1|KV821588.1 Protein Homology CDS 3407 4000 . + 0 ID=cds-OFO25424.1;Parent=gene-HMPREF3052_01695;Dbxref=NCBI_GP:OFO25424.1;Name=OFO25424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273335.1;locus_tag=HMPREF3052_01695;product=GTP cyclohydrolase II;protein_id=OFO25424.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 4126 4201 . + . ID=gene-HMPREF3052_01700;Name=HMPREF3052_01700;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_01700 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 4126 4201 . + . ID=rna-HMPREF3052_01700;Parent=gene-HMPREF3052_01700;anticodon=(pos:4159..4161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01700;product=tRNA-Val GCA_001815685.1|KV821588.1 tRNAscan-SE exon 4126 4201 . + . ID=exon-HMPREF3052_01700-1;Parent=rna-HMPREF3052_01700;anticodon=(pos:4159..4161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01700;product=tRNA-Val GCA_001815685.1|KV821588.1 Genbank gene 4234 4310 . + . ID=gene-HMPREF3052_01705;Name=HMPREF3052_01705;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_01705 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 4234 4310 . + . ID=rna-HMPREF3052_01705;Parent=gene-HMPREF3052_01705;anticodon=(pos:4268..4270);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01705;product=tRNA-Asp GCA_001815685.1|KV821588.1 tRNAscan-SE exon 4234 4310 . + . ID=exon-HMPREF3052_01705-1;Parent=rna-HMPREF3052_01705;anticodon=(pos:4268..4270);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01705;product=tRNA-Asp GCA_001815685.1|KV821588.1 Genbank gene 4507 6492 . - . ID=gene-HMPREF3052_01710;Name=HMPREF3052_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01710 GCA_001815685.1|KV821588.1 Protein Homology CDS 4507 6492 . - 0 ID=cds-OFO25425.1;Parent=gene-HMPREF3052_01710;Dbxref=NCBI_GP:OFO25425.1;Name=OFO25425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448597.1;locus_tag=HMPREF3052_01710;product=DNA topoisomerase IV subunit B;protein_id=OFO25425.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 6561 7097 . - . ID=gene-HMPREF3052_01715;Name=HMPREF3052_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01715 GCA_001815685.1|KV821588.1 Protein Homology CDS 6561 7097 . - 0 ID=cds-OFO25426.1;Parent=gene-HMPREF3052_01715;Dbxref=NCBI_GP:OFO25426.1;Name=OFO25426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747493.1;locus_tag=HMPREF3052_01715;product=RNA pyrophosphohydrolase;protein_id=OFO25426.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 7208 7429 . + . ID=gene-HMPREF3052_01720;Name=HMPREF3052_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01720 GCA_001815685.1|KV821588.1 Protein Homology CDS 7208 7429 . + 0 ID=cds-OFO25427.1;Parent=gene-HMPREF3052_01720;Dbxref=NCBI_GP:OFO25427.1;Name=OFO25427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685270.1;locus_tag=HMPREF3052_01720;product=hypothetical protein;protein_id=OFO25427.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 7426 8571 . + . ID=gene-HMPREF3052_01725;Name=HMPREF3052_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01725 GCA_001815685.1|KV821588.1 Protein Homology CDS 7426 8571 . + 0 ID=cds-OFO25428.1;Parent=gene-HMPREF3052_01725;Dbxref=NCBI_GP:OFO25428.1;Name=OFO25428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741615.1;locus_tag=HMPREF3052_01725;product=polyamine ABC transporter substrate-binding protein;protein_id=OFO25428.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 8679 8951 . + . ID=gene-HMPREF3052_01730;Name=HMPREF3052_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01730 GCA_001815685.1|KV821588.1 Protein Homology CDS 8679 8951 . + 0 ID=cds-OFO25429.1;Parent=gene-HMPREF3052_01730;Dbxref=NCBI_GP:OFO25429.1;Name=OFO25429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448620.1;locus_tag=HMPREF3052_01730;product=hypothetical protein;protein_id=OFO25429.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 8967 10322 . + . ID=gene-HMPREF3052_01735;Name=HMPREF3052_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01735 GCA_001815685.1|KV821588.1 Protein Homology CDS 8967 10322 . + 0 ID=cds-OFO25430.1;Parent=gene-HMPREF3052_01735;Dbxref=NCBI_GP:OFO25430.1;Name=OFO25430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448621.1;locus_tag=HMPREF3052_01735;product=hypothetical protein;protein_id=OFO25430.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 10391 11920 . - . ID=gene-HMPREF3052_01740;Name=HMPREF3052_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01740 GCA_001815685.1|KV821588.1 Protein Homology CDS 10391 11920 . - 0 ID=cds-OFO25431.1;Parent=gene-HMPREF3052_01740;Dbxref=NCBI_GP:OFO25431.1;Name=OFO25431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747487.1;locus_tag=HMPREF3052_01740;product=ATP-binding protein;protein_id=OFO25431.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 12163 13392 . + . ID=gene-HMPREF3052_01745;Name=HMPREF3052_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01745 GCA_001815685.1|KV821588.1 Protein Homology CDS 12163 13392 . + 0 ID=cds-OFO25432.1;Parent=gene-HMPREF3052_01745;Dbxref=NCBI_GP:OFO25432.1;Name=OFO25432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685269.1;locus_tag=HMPREF3052_01745;product=Bcr/CflA family drug resistance efflux transporter;protein_id=OFO25432.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 13454 14263 . + . ID=gene-HMPREF3052_01750;Name=HMPREF3052_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01750 GCA_001815685.1|KV821588.1 Protein Homology CDS 13454 14263 . + 0 ID=cds-OFO25433.1;Parent=gene-HMPREF3052_01750;Dbxref=NCBI_GP:OFO25433.1;Name=OFO25433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117382.1;locus_tag=HMPREF3052_01750;product=glutamate racemase;protein_id=OFO25433.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 14260 14439 . + . ID=gene-HMPREF3052_01755;Name=HMPREF3052_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01755 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 14260 14439 . + 0 ID=cds-OFO25434.1;Parent=gene-HMPREF3052_01755;Dbxref=NCBI_GP:OFO25434.1;Name=OFO25434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01755;product=hypothetical protein;protein_id=OFO25434.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 14529 14951 . + . ID=gene-HMPREF3052_01760;Name=HMPREF3052_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01760 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 14529 14951 . + 0 ID=cds-OFO25435.1;Parent=gene-HMPREF3052_01760;Dbxref=NCBI_GP:OFO25435.1;Name=OFO25435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_01760;product=hypothetical protein;protein_id=OFO25435.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 15189 15854 . - . ID=gene-HMPREF3052_01765;Name=HMPREF3052_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01765 GCA_001815685.1|KV821588.1 Protein Homology CDS 15189 15854 . - 0 ID=cds-OFO25436.1;Parent=gene-HMPREF3052_01765;Dbxref=NCBI_GP:OFO25436.1;Name=OFO25436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212463.1;locus_tag=HMPREF3052_01765;product=beta-phosphoglucomutase;protein_id=OFO25436.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 15867 18125 . - . ID=gene-HMPREF3052_01770;Name=HMPREF3052_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01770 GCA_001815685.1|KV821588.1 Protein Homology CDS 15867 18125 . - 0 ID=cds-OFO25437.1;Parent=gene-HMPREF3052_01770;Dbxref=NCBI_GP:OFO25437.1;Name=OFO25437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234550.1;locus_tag=HMPREF3052_01770;product=maltose phosphorylase;protein_id=OFO25437.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 18200 19552 . - . ID=gene-HMPREF3052_01775;Name=HMPREF3052_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01775 GCA_001815685.1|KV821588.1 Protein Homology CDS 18200 19552 . - 0 ID=cds-OFO25438.1;Parent=gene-HMPREF3052_01775;Dbxref=NCBI_GP:OFO25438.1;Name=OFO25438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680566.1;locus_tag=HMPREF3052_01775;product=MFS transporter;protein_id=OFO25438.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 19893 21569 . + . ID=gene-HMPREF3052_01780;Name=HMPREF3052_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01780 GCA_001815685.1|KV821588.1 Protein Homology CDS 19893 21569 . + 0 ID=cds-OFO25439.1;Parent=gene-HMPREF3052_01780;Dbxref=NCBI_GP:OFO25439.1;Name=OFO25439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232796.1;locus_tag=HMPREF3052_01780;product=energy-dependent translational throttle protein EttA;protein_id=OFO25439.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 21635 22270 . - . ID=gene-HMPREF3052_01785;Name=HMPREF3052_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01785 GCA_001815685.1|KV821588.1 Protein Homology CDS 21635 22270 . - 0 ID=cds-OFO25440.1;Parent=gene-HMPREF3052_01785;Dbxref=NCBI_GP:OFO25440.1;Name=OFO25440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520505.1;locus_tag=HMPREF3052_01785;product=transcriptional regulator;protein_id=OFO25440.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 22497 23765 . + . ID=gene-HMPREF3052_01790;Name=HMPREF3052_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01790 GCA_001815685.1|KV821588.1 Protein Homology CDS 22497 23765 . + 0 ID=cds-OFO25441.1;Parent=gene-HMPREF3052_01790;Dbxref=NCBI_GP:OFO25441.1;Name=OFO25441.1;Note=MexX%3B AmrA%3B involved in resistance to antibiotics%3B periplasmic membrane fusion protein%3B functions along with MexY and OprM%3B part of an inducible system that appears to respond to interference with the cellular translation machinery;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241897.1;locus_tag=HMPREF3052_01790;product=efflux transporter periplasmic adaptor subunit;protein_id=OFO25441.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 23777 26989 . + . ID=gene-HMPREF3052_01795;Name=HMPREF3052_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01795 GCA_001815685.1|KV821588.1 Protein Homology CDS 23777 26989 . + 0 ID=cds-OFO25442.1;Parent=gene-HMPREF3052_01795;Dbxref=NCBI_GP:OFO25442.1;Name=OFO25442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685220.1;locus_tag=HMPREF3052_01795;product=multidrug efflux RND transporter permease subunit;protein_id=OFO25442.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 27028 28452 . + . ID=gene-HMPREF3052_01800;Name=HMPREF3052_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01800 GCA_001815685.1|KV821588.1 Protein Homology CDS 27028 28452 . + 0 ID=cds-OFO25443.1;Parent=gene-HMPREF3052_01800;Dbxref=NCBI_GP:OFO25443.1;Name=OFO25443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680559.1;locus_tag=HMPREF3052_01800;product=multidrug transporter;protein_id=OFO25443.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 28527 29864 . - . ID=gene-HMPREF3052_01805;Name=HMPREF3052_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01805 GCA_001815685.1|KV821588.1 Protein Homology CDS 28527 29864 . - 0 ID=cds-OFO25444.1;Parent=gene-HMPREF3052_01805;Dbxref=NCBI_GP:OFO25444.1;Name=OFO25444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680558.1;locus_tag=HMPREF3052_01805;product=GTP-binding protein;protein_id=OFO25444.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 30566 31051 . - . ID=gene-HMPREF3052_01810;Name=HMPREF3052_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01810 GCA_001815685.1|KV821588.1 Protein Homology CDS 30566 31051 . - 0 ID=cds-OFO25291.1;Parent=gene-HMPREF3052_01810;Dbxref=NCBI_GP:OFO25291.1;Name=OFO25291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008955307.1;locus_tag=HMPREF3052_01810;product=AsnC family transcriptional regulator;protein_id=OFO25291.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 31244 32302 . + . ID=gene-HMPREF3052_01815;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=HMPREF3052_01815 GCA_001815685.1|KV821588.1 Protein Homology CDS 31244 32302 . + 0 ID=cds-OFO25292.1;Parent=gene-HMPREF3052_01815;Dbxref=NCBI_GP:OFO25292.1;Name=OFO25292.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426738.1;locus_tag=HMPREF3052_01815;product=alanine racemase;protein_id=OFO25292.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 32365 33108 . - . ID=gene-HMPREF3052_01820;Name=HMPREF3052_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01820 GCA_001815685.1|KV821588.1 Protein Homology CDS 32365 33108 . - 0 ID=cds-OFO25293.1;Parent=gene-HMPREF3052_01820;Dbxref=NCBI_GP:OFO25293.1;Name=OFO25293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520512.1;locus_tag=HMPREF3052_01820;product=pseudouridylate synthase;protein_id=OFO25293.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 33439 35520 . + . ID=gene-HMPREF3052_01825;Name=HMPREF3052_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01825 GCA_001815685.1|KV821588.1 Protein Homology CDS 33439 35520 . + 0 ID=cds-OFO25294.1;Parent=gene-HMPREF3052_01825;Dbxref=NCBI_GP:OFO25294.1;Name=OFO25294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713845.1;locus_tag=HMPREF3052_01825;product=carbon starvation protein A;protein_id=OFO25294.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 35510 35704 . + . ID=gene-HMPREF3052_01830;Name=HMPREF3052_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01830 GCA_001815685.1|KV821588.1 Protein Homology CDS 35510 35704 . + 0 ID=cds-OFO25295.1;Parent=gene-HMPREF3052_01830;Dbxref=NCBI_GP:OFO25295.1;Name=OFO25295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222250.1;locus_tag=HMPREF3052_01830;product=hypothetical protein;protein_id=OFO25295.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 35825 36115 . - . ID=gene-HMPREF3052_01835;Name=HMPREF3052_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01835 GCA_001815685.1|KV821588.1 Protein Homology CDS 35825 36115 . - 0 ID=cds-OFO25296.1;Parent=gene-HMPREF3052_01835;Dbxref=NCBI_GP:OFO25296.1;Name=OFO25296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685006.1;locus_tag=HMPREF3052_01835;product=MerR family transcriptional regulator;protein_id=OFO25296.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 36131 37090 . - . ID=gene-HMPREF3052_01840;Name=HMPREF3052_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01840 GCA_001815685.1|KV821588.1 Protein Homology CDS 36131 37090 . - 0 ID=cds-OFO25297.1;Parent=gene-HMPREF3052_01840;Dbxref=NCBI_GP:OFO25297.1;Name=OFO25297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270560.1;locus_tag=HMPREF3052_01840;product=DNA-binding protein;protein_id=OFO25297.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 37296 37778 . - . ID=gene-HMPREF3052_01845;Name=HMPREF3052_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01845 GCA_001815685.1|KV821588.1 Protein Homology CDS 37296 37778 . - 0 ID=cds-OFO25298.1;Parent=gene-HMPREF3052_01845;Dbxref=NCBI_GP:OFO25298.1;Name=OFO25298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747439.1;locus_tag=HMPREF3052_01845;product=hypothetical protein;protein_id=OFO25298.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 37951 38655 . - . ID=gene-HMPREF3052_01850;Name=HMPREF3052_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01850 GCA_001815685.1|KV821588.1 Protein Homology CDS 37951 38655 . - 0 ID=cds-OFO25299.1;Parent=gene-HMPREF3052_01850;Dbxref=NCBI_GP:OFO25299.1;Name=OFO25299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680550.1;locus_tag=HMPREF3052_01850;product=hypothetical protein;protein_id=OFO25299.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 38926 41310 . - . ID=gene-HMPREF3052_01855;Name=HMPREF3052_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01855 GCA_001815685.1|KV821588.1 Protein Homology CDS 38926 41310 . - 0 ID=cds-OFO25300.1;Parent=gene-HMPREF3052_01855;Dbxref=NCBI_GP:OFO25300.1;Name=OFO25300.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753989.1;locus_tag=HMPREF3052_01855;product=phosphoenolpyruvate synthase;protein_id=OFO25300.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 41727 42548 . + . ID=gene-HMPREF3052_01860;Name=HMPREF3052_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01860 GCA_001815685.1|KV821588.1 Protein Homology CDS 41727 42548 . + 0 ID=cds-OFO25301.1;Parent=gene-HMPREF3052_01860;Dbxref=NCBI_GP:OFO25301.1;Name=OFO25301.1;Note=mediates the activation of PEP synthetase by an inorganic phosphate pyrophosphorylation and inactivates PEP synthetase by ADP-dependent phosphorylation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVI4.1;locus_tag=HMPREF3052_01860;product=phosphoenolpyruvate synthase regulatory protein;protein_id=OFO25301.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 42604 43170 . - . ID=gene-HMPREF3052_01865;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HMPREF3052_01865 GCA_001815685.1|KV821588.1 Protein Homology CDS 42604 43170 . - 0 ID=cds-OFO25302.1;Parent=gene-HMPREF3052_01865;Dbxref=NCBI_GP:OFO25302.1;Name=OFO25302.1;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;gbkey=CDS;gene=dcd;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004632155.1;locus_tag=HMPREF3052_01865;product=deoxycytidine triphosphate deaminase;protein_id=OFO25302.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 43296 43727 . - . ID=gene-HMPREF3052_01870;Name=HMPREF3052_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01870 GCA_001815685.1|KV821588.1 Protein Homology CDS 43296 43727 . - 0 ID=cds-OFO25303.1;Parent=gene-HMPREF3052_01870;Dbxref=NCBI_GP:OFO25303.1;Name=OFO25303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747434.1;locus_tag=HMPREF3052_01870;product=hypothetical protein;protein_id=OFO25303.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 43750 44532 . - . ID=gene-HMPREF3052_01875;Name=HMPREF3052_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01875 GCA_001815685.1|KV821588.1 Protein Homology CDS 43750 44532 . - 0 ID=cds-OFO25304.1;Parent=gene-HMPREF3052_01875;Dbxref=NCBI_GP:OFO25304.1;Name=OFO25304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685093.1;locus_tag=HMPREF3052_01875;product=ADP-ribosylglycohydrolase;protein_id=OFO25304.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 44610 45509 . - . ID=gene-HMPREF3052_01880;Name=HMPREF3052_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01880 GCA_001815685.1|KV821588.1 Protein Homology CDS 44610 45509 . - 0 ID=cds-OFO25305.1;Parent=gene-HMPREF3052_01880;Dbxref=NCBI_GP:OFO25305.1;Name=OFO25305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O87408.1;locus_tag=HMPREF3052_01880;product=recombination-associated protein RdgC;protein_id=OFO25305.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 45642 45717 . + . ID=gene-HMPREF3052_01885;Name=HMPREF3052_01885;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_01885 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 45642 45717 . + . ID=rna-HMPREF3052_01885;Parent=gene-HMPREF3052_01885;anticodon=(pos:45676..45678);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01885;product=tRNA-Glu GCA_001815685.1|KV821588.1 tRNAscan-SE exon 45642 45717 . + . ID=exon-HMPREF3052_01885-1;Parent=rna-HMPREF3052_01885;anticodon=(pos:45676..45678);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01885;product=tRNA-Glu GCA_001815685.1|KV821588.1 Genbank gene 45843 47138 . + . ID=gene-HMPREF3052_01890;Name=HMPREF3052_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01890 GCA_001815685.1|KV821588.1 Protein Homology CDS 45843 47138 . + 0 ID=cds-OFO25306.1;Parent=gene-HMPREF3052_01890;Dbxref=NCBI_GP:OFO25306.1;Name=OFO25306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573857.1;locus_tag=HMPREF3052_01890;product=serine--tRNA ligase;protein_id=OFO25306.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 47204 47440 . - . ID=gene-HMPREF3052_01895;Name=HMPREF3052_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01895 GCA_001815685.1|KV821588.1 Protein Homology CDS 47204 47440 . - 0 ID=cds-OFO25307.1;Parent=gene-HMPREF3052_01895;Dbxref=NCBI_GP:OFO25307.1;Name=OFO25307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521099.1;locus_tag=HMPREF3052_01895;product=hemolysin;protein_id=OFO25307.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 47570 48373 . - . ID=gene-HMPREF3052_01900;Name=HMPREF3052_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01900 GCA_001815685.1|KV821588.1 Protein Homology CDS 47570 48373 . - 0 ID=cds-OFO25308.1;Parent=gene-HMPREF3052_01900;Dbxref=NCBI_GP:OFO25308.1;Name=OFO25308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218962.1;locus_tag=HMPREF3052_01900;product=ABC transporter substrate-binding protein;protein_id=OFO25308.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 48450 48701 . - . ID=gene-HMPREF3052_01905;Name=HMPREF3052_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01905 GCA_001815685.1|KV821588.1 Protein Homology CDS 48450 48701 . - 0 ID=cds-OFO25309.1;Parent=gene-HMPREF3052_01905;Dbxref=NCBI_GP:OFO25309.1;Name=OFO25309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685102.1;locus_tag=HMPREF3052_01905;product=hypothetical protein;protein_id=OFO25309.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 48864 49664 . + . ID=gene-HMPREF3052_01910;Name=HMPREF3052_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01910 GCA_001815685.1|KV821588.1 Protein Homology CDS 48864 49664 . + 0 ID=cds-OFO25310.1;Parent=gene-HMPREF3052_01910;Dbxref=NCBI_GP:OFO25310.1;Name=OFO25310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714457.1;locus_tag=HMPREF3052_01910;product=hypothetical protein;protein_id=OFO25310.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 49786 50346 . + . ID=gene-HMPREF3052_01915;Name=HMPREF3052_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01915 GCA_001815685.1|KV821588.1 Protein Homology CDS 49786 50346 . + 0 ID=cds-OFO25311.1;Parent=gene-HMPREF3052_01915;Dbxref=NCBI_GP:OFO25311.1;Name=OFO25311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521102.1;locus_tag=HMPREF3052_01915;product=hypothetical protein;protein_id=OFO25311.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 50460 51629 . + . ID=gene-HMPREF3052_01920;Name=HMPREF3052_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01920 GCA_001815685.1|KV821588.1 Protein Homology CDS 50460 51629 . + 0 ID=cds-OFO25354.1;Parent=gene-HMPREF3052_01920;Dbxref=NCBI_GP:OFO25354.1;Name=OFO25354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234138.1;locus_tag=HMPREF3052_01920;product=O-succinylhomoserine sulfhydrolase;protein_id=OFO25354.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 51716 51922 . + . ID=gene-HMPREF3052_01925;Name=HMPREF3052_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01925 GCA_001815685.1|KV821588.1 Protein Homology CDS 51716 51922 . + 0 ID=cds-OFO25312.1;Parent=gene-HMPREF3052_01925;Dbxref=NCBI_GP:OFO25312.1;Name=OFO25312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212781.1;locus_tag=HMPREF3052_01925;product=hypothetical protein;protein_id=OFO25312.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 51988 52779 . - . ID=gene-HMPREF3052_01930;Name=HMPREF3052_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01930 GCA_001815685.1|KV821588.1 Protein Homology CDS 51988 52779 . - 0 ID=cds-OFO25313.1;Parent=gene-HMPREF3052_01930;Dbxref=NCBI_GP:OFO25313.1;Name=OFO25313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521105.1;locus_tag=HMPREF3052_01930;product=hydrolase;protein_id=OFO25313.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 52978 54369 . - . ID=gene-HMPREF3052_01935;Name=HMPREF3052_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01935 GCA_001815685.1|KV821588.1 Protein Homology CDS 52978 54369 . - 0 ID=cds-OFO25314.1;Parent=gene-HMPREF3052_01935;Dbxref=NCBI_GP:OFO25314.1;Name=OFO25314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680517.1;locus_tag=HMPREF3052_01935;product=DNA polymerase III subunit epsilon;protein_id=OFO25314.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 54485 54561 . + . ID=gene-HMPREF3052_01940;Name=HMPREF3052_01940;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_01940 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 54485 54561 . + . ID=rna-HMPREF3052_01940;Parent=gene-HMPREF3052_01940;anticodon=(pos:54519..54521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01940;product=tRNA-Arg GCA_001815685.1|KV821588.1 tRNAscan-SE exon 54485 54561 . + . ID=exon-HMPREF3052_01940-1;Parent=rna-HMPREF3052_01940;anticodon=(pos:54519..54521);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01940;product=tRNA-Arg GCA_001815685.1|KV821588.1 Genbank gene 54574 54648 . + . ID=gene-HMPREF3052_01945;Name=HMPREF3052_01945;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_01945 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 54574 54648 . + . ID=rna-HMPREF3052_01945;Parent=gene-HMPREF3052_01945;anticodon=(pos:54607..54609);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01945;product=tRNA-Glu GCA_001815685.1|KV821588.1 tRNAscan-SE exon 54574 54648 . + . ID=exon-HMPREF3052_01945-1;Parent=rna-HMPREF3052_01945;anticodon=(pos:54607..54609);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_01945;product=tRNA-Glu GCA_001815685.1|KV821588.1 Genbank gene 54819 57044 . + . ID=gene-HMPREF3052_01950;Name=HMPREF3052_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01950 GCA_001815685.1|KV821588.1 Protein Homology CDS 54819 57044 . + 0 ID=cds-OFO25315.1;Parent=gene-HMPREF3052_01950;Dbxref=NCBI_GP:OFO25315.1;Name=OFO25315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680515.1;locus_tag=HMPREF3052_01950;product=competence protein ComA;protein_id=OFO25315.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 57348 57968 . + . ID=gene-HMPREF3052_01955;Name=HMPREF3052_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01955 GCA_001815685.1|KV821588.1 Protein Homology CDS 57348 57968 . + 0 ID=cds-OFO25316.1;Parent=gene-HMPREF3052_01955;Dbxref=NCBI_GP:OFO25316.1;Name=OFO25316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685122.1;locus_tag=HMPREF3052_01955;product=N-(5'-phosphoribosyl)anthranilate isomerase;protein_id=OFO25316.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 58005 58607 . + . ID=gene-HMPREF3052_01960;Name=HMPREF3052_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01960 GCA_001815685.1|KV821588.1 Protein Homology CDS 58005 58607 . + 0 ID=cds-OFO25355.1;Parent=gene-HMPREF3052_01960;Dbxref=NCBI_GP:OFO25355.1;Name=OFO25355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520056.1;locus_tag=HMPREF3052_01960;product=DNA glycosylase;protein_id=OFO25355.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 58612 59022 . + . ID=gene-HMPREF3052_01965;Name=HMPREF3052_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01965 GCA_001815685.1|KV821588.1 Protein Homology CDS 58612 59022 . + 0 ID=cds-OFO25317.1;Parent=gene-HMPREF3052_01965;Dbxref=NCBI_GP:OFO25317.1;Name=OFO25317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747389.1;locus_tag=HMPREF3052_01965;product=hypothetical protein;protein_id=OFO25317.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 59134 60336 . + . ID=gene-HMPREF3052_01970;Name=HMPREF3052_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01970 GCA_001815685.1|KV821588.1 Protein Homology CDS 59134 60336 . + 0 ID=cds-OFO25318.1;Parent=gene-HMPREF3052_01970;Dbxref=NCBI_GP:OFO25318.1;Name=OFO25318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270865.1;locus_tag=HMPREF3052_01970;product=tryptophan synthase subunit beta;protein_id=OFO25318.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 60531 61436 . + . ID=gene-HMPREF3052_01975;Name=HMPREF3052_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01975 GCA_001815685.1|KV821588.1 Protein Homology CDS 60531 61436 . + 0 ID=cds-OFO25319.1;Parent=gene-HMPREF3052_01975;Dbxref=NCBI_GP:OFO25319.1;Name=OFO25319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687401.1;locus_tag=HMPREF3052_01975;product=hypothetical protein;protein_id=OFO25319.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 61492 62781 . + . ID=gene-HMPREF3052_01980;Name=HMPREF3052_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01980 GCA_001815685.1|KV821588.1 Protein Homology CDS 61492 62781 . + 0 ID=cds-OFO25320.1;Parent=gene-HMPREF3052_01980;Dbxref=NCBI_GP:OFO25320.1;Name=OFO25320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747383.1;locus_tag=HMPREF3052_01980;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=OFO25320.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 62778 63434 . + . ID=gene-HMPREF3052_01985;Name=HMPREF3052_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01985 GCA_001815685.1|KV821588.1 Protein Homology CDS 62778 63434 . + 0 ID=cds-OFO25321.1;Parent=gene-HMPREF3052_01985;Dbxref=NCBI_GP:OFO25321.1;Name=OFO25321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680504.1;locus_tag=HMPREF3052_01985;product=dethiobiotin synthase;protein_id=OFO25321.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 63424 63918 . + . ID=gene-HMPREF3052_01990;Name=HMPREF3052_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01990 GCA_001815685.1|KV821588.1 Protein Homology CDS 63424 63918 . + 0 ID=cds-OFO25322.1;Parent=gene-HMPREF3052_01990;Dbxref=NCBI_GP:OFO25322.1;Name=OFO25322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684952.1;locus_tag=HMPREF3052_01990;product=chorismate--pyruvate lyase;protein_id=OFO25322.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 64093 64986 . + . ID=gene-HMPREF3052_01995;Name=HMPREF3052_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_01995 GCA_001815685.1|KV821588.1 Protein Homology CDS 64093 64986 . + 0 ID=cds-OFO25323.1;Parent=gene-HMPREF3052_01995;Dbxref=NCBI_GP:OFO25323.1;Name=OFO25323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680502.1;locus_tag=HMPREF3052_01995;product=4-hydroxybenzoate octaprenyltransferase;protein_id=OFO25323.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 65283 65732 . + . ID=gene-HMPREF3052_02000;Name=HMPREF3052_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02000 GCA_001815685.1|KV821588.1 Protein Homology CDS 65283 65732 . + 0 ID=cds-OFO25324.1;Parent=gene-HMPREF3052_02000;Dbxref=NCBI_GP:OFO25324.1;Name=OFO25324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687701.1;locus_tag=HMPREF3052_02000;product=PTS sugar transporter subunit IIA;protein_id=OFO25324.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 65736 66698 . + . ID=gene-HMPREF3052_02005;Name=HMPREF3052_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02005 GCA_001815685.1|KV821588.1 Protein Homology CDS 65736 66698 . + 0 ID=cds-OFO25325.1;Parent=gene-HMPREF3052_02005;Dbxref=NCBI_GP:OFO25325.1;Name=OFO25325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581160.1;locus_tag=HMPREF3052_02005;product=HPr kinase/phosphorylase;protein_id=OFO25325.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 66679 67533 . + . ID=gene-HMPREF3052_02010;Name=HMPREF3052_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02010 GCA_001815685.1|KV821588.1 Protein Homology CDS 66679 67533 . + 0 ID=cds-OFO25326.1;Parent=gene-HMPREF3052_02010;Dbxref=NCBI_GP:OFO25326.1;Name=OFO25326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756091.1;locus_tag=HMPREF3052_02010;product=RNase adaptor protein RapZ;protein_id=OFO25326.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 67568 67792 . + . ID=gene-HMPREF3052_02015;Name=HMPREF3052_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02015 GCA_001815685.1|KV821588.1 Protein Homology CDS 67568 67792 . + 0 ID=cds-OFO25327.1;Parent=gene-HMPREF3052_02015;Dbxref=NCBI_GP:OFO25327.1;Name=OFO25327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684875.1;locus_tag=HMPREF3052_02015;product=protocatechuate 3%2C4-dioxygenase;protein_id=OFO25327.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 67886 68827 . + . ID=gene-HMPREF3052_02020;Name=HMPREF3052_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02020 GCA_001815685.1|KV821588.1 Protein Homology CDS 67886 68827 . + 0 ID=cds-OFO25328.1;Parent=gene-HMPREF3052_02020;Dbxref=NCBI_GP:OFO25328.1;Name=OFO25328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449265.1;locus_tag=HMPREF3052_02020;product=ribosome biogenesis GTPase YlqF;protein_id=OFO25328.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 68883 69476 . - . ID=gene-HMPREF3052_02025;Name=HMPREF3052_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02025 GCA_001815685.1|KV821588.1 Protein Homology CDS 68883 69476 . - 0 ID=cds-OFO25329.1;Parent=gene-HMPREF3052_02025;Dbxref=NCBI_GP:OFO25329.1;Name=OFO25329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520070.1;locus_tag=HMPREF3052_02025;product=hypothetical protein;protein_id=OFO25329.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 69535 71757 . - . ID=gene-HMPREF3052_02030;Name=HMPREF3052_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02030 GCA_001815685.1|KV821588.1 Protein Homology CDS 69535 71757 . - 0 ID=cds-OFO25330.1;Parent=gene-HMPREF3052_02030;Dbxref=NCBI_GP:OFO25330.1;Name=OFO25330.1;Note=NADP-specific%2C catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707467.1;locus_tag=HMPREF3052_02030;product=isocitrate dehydrogenase;protein_id=OFO25330.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 71931 73133 . - . ID=gene-HMPREF3052_02035;Name=HMPREF3052_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02035 GCA_001815685.1|KV821588.1 Protein Homology CDS 71931 73133 . - 0 ID=cds-OFO25331.1;Parent=gene-HMPREF3052_02035;Dbxref=NCBI_GP:OFO25331.1;Name=OFO25331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680492.1;locus_tag=HMPREF3052_02035;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=OFO25331.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 73137 73655 . - . ID=gene-HMPREF3052_02040;Name=HMPREF3052_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02040 GCA_001815685.1|KV821588.1 Protein Homology CDS 73137 73655 . - 0 ID=cds-OFO25332.1;Parent=gene-HMPREF3052_02040;Dbxref=NCBI_GP:OFO25332.1;Name=OFO25332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680491.1;locus_tag=HMPREF3052_02040;product=hypothetical protein;protein_id=OFO25332.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 73753 74991 . - . ID=gene-HMPREF3052_02045;Name=HMPREF3052_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02045 GCA_001815685.1|KV821588.1 Protein Homology CDS 73753 74991 . - 0 ID=cds-OFO25333.1;Parent=gene-HMPREF3052_02045;Dbxref=NCBI_GP:OFO25333.1;Name=OFO25333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680490.1;locus_tag=HMPREF3052_02045;product=FAD-dependent oxidoreductase;protein_id=OFO25333.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 75127 77445 . - . ID=gene-HMPREF3052_02050;Name=HMPREF3052_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02050 GCA_001815685.1|KV821588.1 Protein Homology CDS 75127 77445 . - 0 ID=cds-OFO25334.1;Parent=gene-HMPREF3052_02050;Dbxref=NCBI_GP:OFO25334.1;Name=OFO25334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685071.1;locus_tag=HMPREF3052_02050;product=hypothetical protein;protein_id=OFO25334.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 77539 78156 . - . ID=gene-HMPREF3052_02055;Name=HMPREF3052_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02055 GCA_001815685.1|KV821588.1 Protein Homology CDS 77539 78156 . - 0 ID=cds-OFO25335.1;Parent=gene-HMPREF3052_02055;Dbxref=NCBI_GP:OFO25335.1;Name=OFO25335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747351.1;locus_tag=HMPREF3052_02055;product=4'-phosphopantetheinyl transferase;protein_id=OFO25335.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 78209 78580 . - . ID=gene-HMPREF3052_02060;Name=HMPREF3052_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02060 GCA_001815685.1|KV821588.1 Protein Homology CDS 78209 78580 . - 0 ID=cds-OFO25356.1;Parent=gene-HMPREF3052_02060;Dbxref=NCBI_GP:OFO25356.1;Name=OFO25356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680483.1;locus_tag=HMPREF3052_02060;product=hypothetical protein;protein_id=OFO25356.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 78740 78934 . + . ID=gene-HMPREF3052_02065;Name=HMPREF3052_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02065 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 78740 78934 . + 0 ID=cds-OFO25336.1;Parent=gene-HMPREF3052_02065;Dbxref=NCBI_GP:OFO25336.1;Name=OFO25336.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02065;product=hypothetical protein;protein_id=OFO25336.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 78921 79013 . + . ID=gene-HMPREF3052_02070;Name=HMPREF3052_02070;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02070 GCA_001815685.1|KV821588.1 tRNAscan-SE tRNA 78921 79013 . + . ID=rna-HMPREF3052_02070;Parent=gene-HMPREF3052_02070;anticodon=(pos:78955..78957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02070;product=tRNA-Ser GCA_001815685.1|KV821588.1 tRNAscan-SE exon 78921 79013 . + . ID=exon-HMPREF3052_02070-1;Parent=rna-HMPREF3052_02070;anticodon=(pos:78955..78957);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02070;product=tRNA-Ser GCA_001815685.1|KV821588.1 Genbank gene 79094 79654 . + . ID=gene-HMPREF3052_02075;Name=HMPREF3052_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02075 GCA_001815685.1|KV821588.1 Protein Homology CDS 79094 79654 . + 0 ID=cds-OFO25337.1;Parent=gene-HMPREF3052_02075;Dbxref=NCBI_GP:OFO25337.1;Name=OFO25337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448741.1;locus_tag=HMPREF3052_02075;product=pseudouridine synthase;protein_id=OFO25337.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 79710 80516 . - . ID=gene-HMPREF3052_02080;Name=HMPREF3052_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02080 GCA_001815685.1|KV821588.1 Protein Homology CDS 79710 80516 . - 0 ID=cds-OFO25338.1;Parent=gene-HMPREF3052_02080;Dbxref=NCBI_GP:OFO25338.1;Name=OFO25338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575297.1;locus_tag=HMPREF3052_02080;product=phosphoribosylglycinamide formyltransferase;protein_id=OFO25338.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 80667 82043 . - . ID=gene-HMPREF3052_02085;Name=HMPREF3052_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02085 GCA_001815685.1|KV821588.1 Protein Homology CDS 80667 82043 . - 0 ID=cds-OFO25339.1;Parent=gene-HMPREF3052_02085;Dbxref=NCBI_GP:OFO25339.1;Name=OFO25339.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680480.1;locus_tag=HMPREF3052_02085;product=DNA repair protein RadA;protein_id=OFO25339.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 82139 83611 . - . ID=gene-HMPREF3052_02090;Name=HMPREF3052_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02090 GCA_001815685.1|KV821588.1 Protein Homology CDS 82139 83611 . - 0 ID=cds-OFO25340.1;Parent=gene-HMPREF3052_02090;Dbxref=NCBI_GP:OFO25340.1;Name=OFO25340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684883.1;locus_tag=HMPREF3052_02090;product=peptidase S41;protein_id=OFO25340.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 83827 85743 . - . ID=gene-HMPREF3052_02095;Name=HMPREF3052_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02095 GCA_001815685.1|KV821588.1 Protein Homology CDS 83827 85743 . - 0 ID=cds-OFO25341.1;Parent=gene-HMPREF3052_02095;Dbxref=NCBI_GP:OFO25341.1;Name=OFO25341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778098.1;locus_tag=HMPREF3052_02095;product=hypothetical protein;protein_id=OFO25341.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 85918 86463 . + . ID=gene-HMPREF3052_02100;Name=HMPREF3052_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02100 GCA_001815685.1|KV821588.1 Protein Homology CDS 85918 86463 . + 0 ID=cds-OFO25342.1;Parent=gene-HMPREF3052_02100;Dbxref=NCBI_GP:OFO25342.1;Name=OFO25342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747327.1;locus_tag=HMPREF3052_02100;product=CreA protein;protein_id=OFO25342.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 86491 87039 . + . ID=gene-HMPREF3052_02105;Name=HMPREF3052_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02105 GCA_001815685.1|KV821588.1 Protein Homology CDS 86491 87039 . + 0 ID=cds-OFO25343.1;Parent=gene-HMPREF3052_02105;Dbxref=NCBI_GP:OFO25343.1;Name=OFO25343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685161.1;locus_tag=HMPREF3052_02105;product=hypothetical protein;protein_id=OFO25343.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 87032 87487 . + . ID=gene-HMPREF3052_02110;Name=HMPREF3052_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02110 GCA_001815685.1|KV821588.1 Protein Homology CDS 87032 87487 . + 0 ID=cds-OFO25344.1;Parent=gene-HMPREF3052_02110;Dbxref=NCBI_GP:OFO25344.1;Name=OFO25344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520086.1;locus_tag=HMPREF3052_02110;product=crossover junction endodeoxyribonuclease RuvA;protein_id=OFO25344.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 87651 88073 . + . ID=gene-HMPREF3052_02115;Name=HMPREF3052_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02115 GCA_001815685.1|KV821588.1 Protein Homology CDS 87651 88073 . + 0 ID=cds-OFO25345.1;Parent=gene-HMPREF3052_02115;Dbxref=NCBI_GP:OFO25345.1;Name=OFO25345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284157.1;locus_tag=HMPREF3052_02115;product=ribosomal protein P2;protein_id=OFO25345.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 88222 88770 . + . ID=gene-HMPREF3052_02120;Name=HMPREF3052_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02120 GCA_001815685.1|KV821588.1 Protein Homology CDS 88222 88770 . + 0 ID=cds-OFO25346.1;Parent=gene-HMPREF3052_02120;Dbxref=NCBI_GP:OFO25346.1;Name=OFO25346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002236926.1;locus_tag=HMPREF3052_02120;product=alkylhydroperoxidase;protein_id=OFO25346.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 88896 89987 . + . ID=gene-HMPREF3052_02125;Name=HMPREF3052_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02125 GCA_001815685.1|KV821588.1 Protein Homology CDS 88896 89987 . + 0 ID=cds-OFO25347.1;Parent=gene-HMPREF3052_02125;Dbxref=NCBI_GP:OFO25347.1;Name=OFO25347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003751739.1;locus_tag=HMPREF3052_02125;product=acyl-CoA dehydrogenase;protein_id=OFO25347.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 90072 90242 . + . ID=gene-HMPREF3052_02130;Name=HMPREF3052_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02130 GCA_001815685.1|KV821588.1 Protein Homology CDS 90072 90242 . + 0 ID=cds-OFO25348.1;Parent=gene-HMPREF3052_02130;Dbxref=NCBI_GP:OFO25348.1;Name=OFO25348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744701.1;locus_tag=HMPREF3052_02130;product=rubredoxin;protein_id=OFO25348.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 90707 91708 . + . ID=gene-HMPREF3052_02135;Name=HMPREF3052_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02135 GCA_001815685.1|KV821588.1 Protein Homology CDS 90707 91708 . + 0 ID=cds-OFO25357.1;Parent=gene-HMPREF3052_02135;Dbxref=NCBI_GP:OFO25357.1;Name=OFO25357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247241.1;locus_tag=HMPREF3052_02135;product=replication protein;protein_id=OFO25357.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 91754 92044 . + . ID=gene-HMPREF3052_02140;Name=HMPREF3052_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02140 GCA_001815685.1|KV821588.1 Protein Homology CDS 91754 92044 . + 0 ID=cds-OFO25349.1;Parent=gene-HMPREF3052_02140;Dbxref=NCBI_GP:OFO25349.1;Name=OFO25349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250780.1;locus_tag=HMPREF3052_02140;product=hypothetical protein;protein_id=OFO25349.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 92049 92246 . + . ID=gene-HMPREF3052_02145;Name=HMPREF3052_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02145 GCA_001815685.1|KV821588.1 Protein Homology CDS 92049 92246 . + 0 ID=cds-OFO25350.1;Parent=gene-HMPREF3052_02145;Dbxref=NCBI_GP:OFO25350.1;Name=OFO25350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215770.1;locus_tag=HMPREF3052_02145;product=hypothetical protein;protein_id=OFO25350.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 92417 92659 . + . ID=gene-HMPREF3052_02150;Name=HMPREF3052_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02150 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 92417 92659 . + 0 ID=cds-OFO25351.1;Parent=gene-HMPREF3052_02150;Dbxref=NCBI_GP:OFO25351.1;Name=OFO25351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02150;product=hypothetical protein;protein_id=OFO25351.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 92675 92986 . + . ID=gene-HMPREF3052_02155;Name=HMPREF3052_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02155 GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 92675 92986 . + 0 ID=cds-OFO25352.1;Parent=gene-HMPREF3052_02155;Dbxref=NCBI_GP:OFO25352.1;Name=OFO25352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02155;product=hypothetical protein;protein_id=OFO25352.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank gene 93098 93406 . + . ID=gene-HMPREF3052_02160;Name=HMPREF3052_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02160 GCA_001815685.1|KV821588.1 Protein Homology CDS 93098 93406 . + 0 ID=cds-OFO25353.1;Parent=gene-HMPREF3052_02160;Dbxref=NCBI_GP:OFO25353.1;Name=OFO25353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685211.1;locus_tag=HMPREF3052_02160;product=hypothetical protein;protein_id=OFO25353.1;transl_table=11 GCA_001815685.1|KV821588.1 Genbank pseudogene 93399 93826 . + . ID=gene-HMPREF3052_02165;Name=HMPREF3052_02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02165;pseudo=true GCA_001815685.1|KV821588.1 GeneMarkS+ CDS 93399 93826 . + 0 ID=cds-HMPREF3052_02165;Parent=gene-HMPREF3052_02165;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02165;product=TspB protein;pseudo=true;transl_table=11 ##sequence-region KV821589.1 1 28693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821589.1 Genbank region 1 28693 . + . ID=KV821589.1:1..28693;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821589.1 Genbank gene 26 313 . - . ID=gene-HMPREF3052_02170;Name=HMPREF3052_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02170 GCA_001815685.1|KV821589.1 Protein Homology CDS 26 313 . - 0 ID=cds-OFO25101.1;Parent=gene-HMPREF3052_02170;Dbxref=NCBI_GP:OFO25101.1;Name=OFO25101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683845.1;locus_tag=HMPREF3052_02170;product=transposase;protein_id=OFO25101.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 418 2445 . - . ID=gene-HMPREF3052_02175;Name=HMPREF3052_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02175 GCA_001815685.1|KV821589.1 GeneMarkS+ CDS 418 2445 . - 0 ID=cds-OFO25102.1;Parent=gene-HMPREF3052_02175;Dbxref=NCBI_GP:OFO25102.1;Name=OFO25102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02175;product=hypothetical protein;protein_id=OFO25102.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank pseudogene 2707 3282 . - . ID=gene-HMPREF3052_02180;Name=HMPREF3052_02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02180;pseudo=true GCA_001815685.1|KV821589.1 Protein Homology CDS 2707 3282 . - 0 ID=cds-HMPREF3052_02180;Parent=gene-HMPREF3052_02180;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283523.1;locus_tag=HMPREF3052_02180;product=serine acetyltransferase;pseudo=true;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 3445 4083 . + . ID=gene-HMPREF3052_02185;Name=HMPREF3052_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02185 GCA_001815685.1|KV821589.1 Protein Homology CDS 3445 4083 . + 0 ID=cds-OFO25103.1;Parent=gene-HMPREF3052_02185;Dbxref=NCBI_GP:OFO25103.1;Name=OFO25103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748043.1;locus_tag=HMPREF3052_02185;product=hypothetical protein;protein_id=OFO25103.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 4543 5055 . + . ID=gene-HMPREF3052_02190;Name=HMPREF3052_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02190 GCA_001815685.1|KV821589.1 Protein Homology CDS 4543 5055 . + 0 ID=cds-OFO25104.1;Parent=gene-HMPREF3052_02190;Dbxref=NCBI_GP:OFO25104.1;Name=OFO25104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426477.1;locus_tag=HMPREF3052_02190;product=cell envelope protein SmpA;protein_id=OFO25104.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 5064 5492 . + . ID=gene-HMPREF3052_02195;Name=HMPREF3052_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02195 GCA_001815685.1|KV821589.1 Protein Homology CDS 5064 5492 . + 0 ID=cds-OFO25105.1;Parent=gene-HMPREF3052_02195;Dbxref=NCBI_GP:OFO25105.1;Name=OFO25105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679668.1;locus_tag=HMPREF3052_02195;product=hypothetical protein;protein_id=OFO25105.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 5795 6259 . + . ID=gene-HMPREF3052_02200;Name=HMPREF3052_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02200 GCA_001815685.1|KV821589.1 Protein Homology CDS 5795 6259 . + 0 ID=cds-OFO25106.1;Parent=gene-HMPREF3052_02200;Dbxref=NCBI_GP:OFO25106.1;Name=OFO25106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679671.1;locus_tag=HMPREF3052_02200;product=hypothetical protein;protein_id=OFO25106.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 6321 6854 . - . ID=gene-HMPREF3052_02205;Name=HMPREF3052_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02205 GCA_001815685.1|KV821589.1 Protein Homology CDS 6321 6854 . - 0 ID=cds-OFO25107.1;Parent=gene-HMPREF3052_02205;Dbxref=NCBI_GP:OFO25107.1;Name=OFO25107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519047.1;locus_tag=HMPREF3052_02205;product=acetyltransferase;protein_id=OFO25107.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 7136 7351 . + . ID=gene-HMPREF3052_02210;Name=HMPREF3052_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02210 GCA_001815685.1|KV821589.1 Protein Homology CDS 7136 7351 . + 0 ID=cds-OFO25108.1;Parent=gene-HMPREF3052_02210;Dbxref=NCBI_GP:OFO25108.1;Name=OFO25108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681847.1;locus_tag=HMPREF3052_02210;product=50S ribosomal protein L31;protein_id=OFO25108.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 7591 9249 . + . ID=gene-HMPREF3052_02215;Name=HMPREF3052_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02215 GCA_001815685.1|KV821589.1 Protein Homology CDS 7591 9249 . + 0 ID=cds-OFO25109.1;Parent=gene-HMPREF3052_02215;Dbxref=NCBI_GP:OFO25109.1;Name=OFO25109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748022.1;locus_tag=HMPREF3052_02215;product=hypothetical protein;protein_id=OFO25109.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 9368 10285 . + . ID=gene-HMPREF3052_02220;Name=HMPREF3052_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02220 GCA_001815685.1|KV821589.1 Protein Homology CDS 9368 10285 . + 0 ID=cds-OFO25110.1;Parent=gene-HMPREF3052_02220;Dbxref=NCBI_GP:OFO25110.1;Name=OFO25110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683924.1;locus_tag=HMPREF3052_02220;product=hypothetical protein;protein_id=OFO25110.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 10509 11309 . + . ID=gene-HMPREF3052_02225;Name=HMPREF3052_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02225 GCA_001815685.1|KV821589.1 Protein Homology CDS 10509 11309 . + 0 ID=cds-OFO25111.1;Parent=gene-HMPREF3052_02225;Dbxref=NCBI_GP:OFO25111.1;Name=OFO25111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519053.1;locus_tag=HMPREF3052_02225;product=ABC transporter ATP-binding protein;protein_id=OFO25111.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 11375 12151 . + . ID=gene-HMPREF3052_02230;Name=HMPREF3052_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02230 GCA_001815685.1|KV821589.1 Protein Homology CDS 11375 12151 . + 0 ID=cds-OFO25112.1;Parent=gene-HMPREF3052_02230;Dbxref=NCBI_GP:OFO25112.1;Name=OFO25112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687103.1;locus_tag=HMPREF3052_02230;product=ABC transporter permease;protein_id=OFO25112.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 12202 12696 . + . ID=gene-HMPREF3052_02235;Name=HMPREF3052_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02235 GCA_001815685.1|KV821589.1 Protein Homology CDS 12202 12696 . + 0 ID=cds-OFO25113.1;Parent=gene-HMPREF3052_02235;Dbxref=NCBI_GP:OFO25113.1;Name=OFO25113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681819.1;locus_tag=HMPREF3052_02235;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=OFO25113.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 12729 13319 . + . ID=gene-HMPREF3052_02240;Name=HMPREF3052_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02240 GCA_001815685.1|KV821589.1 Protein Homology CDS 12729 13319 . + 0 ID=cds-OFO25114.1;Parent=gene-HMPREF3052_02240;Dbxref=NCBI_GP:OFO25114.1;Name=OFO25114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272283.1;locus_tag=HMPREF3052_02240;product=transporter;protein_id=OFO25114.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 13383 13661 . + . ID=gene-HMPREF3052_02245;Name=HMPREF3052_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02245 GCA_001815685.1|KV821589.1 Protein Homology CDS 13383 13661 . + 0 ID=cds-OFO25115.1;Parent=gene-HMPREF3052_02245;Dbxref=NCBI_GP:OFO25115.1;Name=OFO25115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687106.1;locus_tag=HMPREF3052_02245;product=sulfate transporter;protein_id=OFO25115.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 13658 14485 . + . ID=gene-HMPREF3052_02250;Name=HMPREF3052_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02250 GCA_001815685.1|KV821589.1 Protein Homology CDS 13658 14485 . + 0 ID=cds-OFO25116.1;Parent=gene-HMPREF3052_02250;Dbxref=NCBI_GP:OFO25116.1;Name=OFO25116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683773.1;locus_tag=HMPREF3052_02250;product=ABC transporter;protein_id=OFO25116.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 14601 14963 . + . ID=gene-HMPREF3052_02255;Name=HMPREF3052_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02255 GCA_001815685.1|KV821589.1 Protein Homology CDS 14601 14963 . + 0 ID=cds-OFO25117.1;Parent=gene-HMPREF3052_02255;Dbxref=NCBI_GP:OFO25117.1;Name=OFO25117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681812.1;locus_tag=HMPREF3052_02255;product=VacJ;protein_id=OFO25117.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 14963 15346 . + . ID=gene-HMPREF3052_02260;Name=HMPREF3052_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02260 GCA_001815685.1|KV821589.1 Protein Homology CDS 14963 15346 . + 0 ID=cds-OFO25118.1;Parent=gene-HMPREF3052_02260;Dbxref=NCBI_GP:OFO25118.1;Name=OFO25118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519059.1;locus_tag=HMPREF3052_02260;product=thioesterase;protein_id=OFO25118.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 15343 15831 . + . ID=gene-HMPREF3052_02265;Name=HMPREF3052_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02265 GCA_001815685.1|KV821589.1 Protein Homology CDS 15343 15831 . + 0 ID=cds-OFO25119.1;Parent=gene-HMPREF3052_02265;Dbxref=NCBI_GP:OFO25119.1;Name=OFO25119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676062.1;locus_tag=HMPREF3052_02265;product=thioredoxin;protein_id=OFO25119.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 15975 17129 . + . ID=gene-HMPREF3052_02270;Name=HMPREF3052_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02270 GCA_001815685.1|KV821589.1 Protein Homology CDS 15975 17129 . + 0 ID=cds-OFO25120.1;Parent=gene-HMPREF3052_02270;Dbxref=NCBI_GP:OFO25120.1;Name=OFO25120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5D9.1;locus_tag=HMPREF3052_02270;product=GTPase ObgE;protein_id=OFO25120.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 17290 18099 . + . ID=gene-HMPREF3052_02275;Name=HMPREF3052_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02275 GCA_001815685.1|KV821589.1 Protein Homology CDS 17290 18099 . + 0 ID=cds-OFO25121.1;Parent=gene-HMPREF3052_02275;Dbxref=NCBI_GP:OFO25121.1;Name=OFO25121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342860.1;locus_tag=HMPREF3052_02275;product=DNA adenine methylase;protein_id=OFO25121.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 18092 18907 . + . ID=gene-HMPREF3052_02280;Name=HMPREF3052_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02280 GCA_001815685.1|KV821589.1 Protein Homology CDS 18092 18907 . + 0 ID=cds-OFO25122.1;Parent=gene-HMPREF3052_02280;Dbxref=NCBI_GP:OFO25122.1;Name=OFO25122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313078.1;locus_tag=HMPREF3052_02280;product=DNA methyltransferase;protein_id=OFO25122.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank pseudogene 18897 19133 . + . ID=gene-HMPREF3052_02285;Name=HMPREF3052_02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02285;pseudo=true GCA_001815685.1|KV821589.1 Protein Homology CDS 18897 19133 . + 0 ID=cds-HMPREF3052_02285;Parent=gene-HMPREF3052_02285;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012964296.1;locus_tag=HMPREF3052_02285;product=DNA mismatch repair protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 19149 19529 . + . ID=gene-HMPREF3052_02290;Name=HMPREF3052_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02290 GCA_001815685.1|KV821589.1 Protein Homology CDS 19149 19529 . + 0 ID=cds-OFO25132.1;Parent=gene-HMPREF3052_02290;Dbxref=NCBI_GP:OFO25132.1;Name=OFO25132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012964297.1;locus_tag=HMPREF3052_02290;product=hypothetical protein;protein_id=OFO25132.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 19532 20953 . + . ID=gene-HMPREF3052_02295;Name=HMPREF3052_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02295 GCA_001815685.1|KV821589.1 Protein Homology CDS 19532 20953 . + 0 ID=cds-OFO25123.1;Parent=gene-HMPREF3052_02295;Dbxref=NCBI_GP:OFO25123.1;Name=OFO25123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXE6.1;locus_tag=HMPREF3052_02295;product=cysteine--tRNA ligase;protein_id=OFO25123.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 21066 21671 . - . ID=gene-HMPREF3052_02300;Name=HMPREF3052_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02300 GCA_001815685.1|KV821589.1 Protein Homology CDS 21066 21671 . - 0 ID=cds-OFO25124.1;Parent=gene-HMPREF3052_02300;Dbxref=NCBI_GP:OFO25124.1;Name=OFO25124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201279.1;locus_tag=HMPREF3052_02300;product=nitroreductase;protein_id=OFO25124.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 21687 22082 . - . ID=gene-HMPREF3052_02305;Name=HMPREF3052_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02305 GCA_001815685.1|KV821589.1 Protein Homology CDS 21687 22082 . - 0 ID=cds-OFO25125.1;Parent=gene-HMPREF3052_02305;Dbxref=NCBI_GP:OFO25125.1;Name=OFO25125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681787.1;locus_tag=HMPREF3052_02305;product=LuxR family transcriptional regulator;protein_id=OFO25125.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 22211 23101 . + . ID=gene-HMPREF3052_02310;Name=HMPREF3052_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02310 GCA_001815685.1|KV821589.1 Protein Homology CDS 22211 23101 . + 0 ID=cds-OFO25126.1;Parent=gene-HMPREF3052_02310;Dbxref=NCBI_GP:OFO25126.1;Name=OFO25126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747995.1;locus_tag=HMPREF3052_02310;product=LysR family transcriptional regulator;protein_id=OFO25126.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 23159 23500 . - . ID=gene-HMPREF3052_02315;Name=HMPREF3052_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02315 GCA_001815685.1|KV821589.1 Protein Homology CDS 23159 23500 . - 0 ID=cds-OFO25127.1;Parent=gene-HMPREF3052_02315;Dbxref=NCBI_GP:OFO25127.1;Name=OFO25127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271734.1;locus_tag=HMPREF3052_02315;product=hypothetical protein;protein_id=OFO25127.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 23631 24698 . - . ID=gene-HMPREF3052_02320;Name=HMPREF3052_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02320 GCA_001815685.1|KV821589.1 Protein Homology CDS 23631 24698 . - 0 ID=cds-OFO25128.1;Parent=gene-HMPREF3052_02320;Dbxref=NCBI_GP:OFO25128.1;Name=OFO25128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312779.1;locus_tag=HMPREF3052_02320;product=addiction module protein;protein_id=OFO25128.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 24844 27117 . - . ID=gene-HMPREF3052_02325;Name=HMPREF3052_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02325 GCA_001815685.1|KV821589.1 Protein Homology CDS 24844 27117 . - 0 ID=cds-OFO25129.1;Parent=gene-HMPREF3052_02325;Dbxref=NCBI_GP:OFO25129.1;Name=OFO25129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225921.1;locus_tag=HMPREF3052_02325;product=RNA-binding transcriptional accessory protein;protein_id=OFO25129.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 27168 27443 . - . ID=gene-HMPREF3052_02330;Name=HMPREF3052_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02330 GCA_001815685.1|KV821589.1 GeneMarkS+ CDS 27168 27443 . - 0 ID=cds-OFO25130.1;Parent=gene-HMPREF3052_02330;Dbxref=NCBI_GP:OFO25130.1;Name=OFO25130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02330;product=hypothetical protein;protein_id=OFO25130.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank gene 27527 28258 . - . ID=gene-HMPREF3052_02335;Name=HMPREF3052_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02335 GCA_001815685.1|KV821589.1 GeneMarkS+ CDS 27527 28258 . - 0 ID=cds-OFO25131.1;Parent=gene-HMPREF3052_02335;Dbxref=NCBI_GP:OFO25131.1;Name=OFO25131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02335;product=hypothetical protein;protein_id=OFO25131.1;transl_table=11 GCA_001815685.1|KV821589.1 Genbank pseudogene 28411 28693 . - . ID=gene-HMPREF3052_02340;Name=HMPREF3052_02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02340;pseudo=true GCA_001815685.1|KV821589.1 GeneMarkS+ CDS 28411 28693 . - 1 ID=cds-HMPREF3052_02340;Parent=gene-HMPREF3052_02340;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02340;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821590.1 1 592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821590.1 Genbank region 1 592 . + . ID=KV821590.1:1..592;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821590.1 Genbank pseudogene 1 592 . + . ID=gene-HMPREF3052_02345;Name=HMPREF3052_02345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02345;pseudo=true GCA_001815685.1|KV821590.1 GeneMarkS+ CDS 1 592 . + 1 ID=cds-HMPREF3052_02345;Parent=gene-HMPREF3052_02345;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02345;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821591.1 1 346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821591.1 Genbank region 1 346 . + . ID=KV821591.1:1..346;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821591.1 Genbank gene 1 272 . + . ID=gene-HMPREF3052_02350;Name=HMPREF3052_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02350;partial=true;start_range=.,1 GCA_001815685.1|KV821591.1 Protein Homology CDS 1 272 . + 2 ID=cds-OFO24138.1;Parent=gene-HMPREF3052_02350;Dbxref=NCBI_GP:OFO24138.1;Name=OFO24138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252973.1;locus_tag=HMPREF3052_02350;partial=true;product=hypothetical protein;protein_id=OFO24138.1;start_range=.,1;transl_table=11 ##sequence-region KV821592.1 1 905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821592.1 Genbank region 1 905 . + . ID=KV821592.1:1..905;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821592.1 Genbank gene 228 455 . + . ID=gene-HMPREF3052_02355;Name=HMPREF3052_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02355 GCA_001815685.1|KV821592.1 Protein Homology CDS 228 455 . + 0 ID=cds-OFO24132.1;Parent=gene-HMPREF3052_02355;Dbxref=NCBI_GP:OFO24132.1;Name=OFO24132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520694.1;locus_tag=HMPREF3052_02355;product=hypothetical protein;protein_id=OFO24132.1;transl_table=11 GCA_001815685.1|KV821592.1 Genbank pseudogene 663 905 . + . ID=gene-HMPREF3052_02360;Name=HMPREF3052_02360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02360;pseudo=true GCA_001815685.1|KV821592.1 GeneMarkS+ CDS 663 905 . + 0 ID=cds-HMPREF3052_02360;Parent=gene-HMPREF3052_02360;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02360;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821593.1 1 7746 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821593.1 Genbank region 1 7746 . + . ID=KV821593.1:1..7746;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821593.1 Genbank gene 141 2276 . - . ID=gene-HMPREF3052_02365;Name=HMPREF3052_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02365 GCA_001815685.1|KV821593.1 Protein Homology CDS 141 2276 . - 0 ID=cds-OFO24078.1;Parent=gene-HMPREF3052_02365;Dbxref=NCBI_GP:OFO24078.1;Name=OFO24078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764581.1;locus_tag=HMPREF3052_02365;product=hypothetical protein;protein_id=OFO24078.1;transl_table=11 GCA_001815685.1|KV821593.1 Genbank gene 2439 3668 . - . ID=gene-HMPREF3052_02370;Name=HMPREF3052_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02370 GCA_001815685.1|KV821593.1 Protein Homology CDS 2439 3668 . - 0 ID=cds-OFO24079.1;Parent=gene-HMPREF3052_02370;Dbxref=NCBI_GP:OFO24079.1;Name=OFO24079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759784.1;locus_tag=HMPREF3052_02370;product=type IV pili twitching motility protein PilT;protein_id=OFO24079.1;transl_table=11 GCA_001815685.1|KV821593.1 Genbank gene 3755 4801 . - . ID=gene-HMPREF3052_02375;Name=HMPREF3052_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02375 GCA_001815685.1|KV821593.1 Protein Homology CDS 3755 4801 . - 0 ID=cds-OFO24080.1;Parent=gene-HMPREF3052_02375;Dbxref=NCBI_GP:OFO24080.1;Name=OFO24080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747652.1;locus_tag=HMPREF3052_02375;product=twitching motility protein PilT;protein_id=OFO24080.1;transl_table=11 GCA_001815685.1|KV821593.1 Genbank gene 4919 5614 . + . ID=gene-HMPREF3052_02380;Name=HMPREF3052_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02380 GCA_001815685.1|KV821593.1 Protein Homology CDS 4919 5614 . + 0 ID=cds-OFO24081.1;Parent=gene-HMPREF3052_02380;Dbxref=NCBI_GP:OFO24081.1;Name=OFO24081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759781.1;locus_tag=HMPREF3052_02380;product=YggS family pyridoxal phosphate enzyme;protein_id=OFO24081.1;transl_table=11 GCA_001815685.1|KV821593.1 Genbank gene 5691 6488 . + . ID=gene-HMPREF3052_02385;Name=HMPREF3052_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02385 GCA_001815685.1|KV821593.1 Protein Homology CDS 5691 6488 . + 0 ID=cds-OFO24082.1;Parent=gene-HMPREF3052_02385;Dbxref=NCBI_GP:OFO24082.1;Name=OFO24082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747647.1;locus_tag=HMPREF3052_02385;product=pyrroline-5-carboxylate reductase;protein_id=OFO24082.1;transl_table=11 GCA_001815685.1|KV821593.1 Genbank gene 6491 7048 . + . ID=gene-HMPREF3052_02390;Name=HMPREF3052_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02390 GCA_001815685.1|KV821593.1 Protein Homology CDS 6491 7048 . + 0 ID=cds-OFO24083.1;Parent=gene-HMPREF3052_02390;Dbxref=NCBI_GP:OFO24083.1;Name=OFO24083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681243.1;locus_tag=HMPREF3052_02390;product=hypothetical protein;protein_id=OFO24083.1;transl_table=11 GCA_001815685.1|KV821593.1 Genbank gene 7282 7698 . + . ID=gene-HMPREF3052_02395;Name=HMPREF3052_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02395 GCA_001815685.1|KV821593.1 Protein Homology CDS 7282 7698 . + 0 ID=cds-OFO24084.1;Parent=gene-HMPREF3052_02395;Dbxref=NCBI_GP:OFO24084.1;Name=OFO24084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224742.1;locus_tag=HMPREF3052_02395;product=RNA polymerase-binding protein DksA;protein_id=OFO24084.1;transl_table=11 ##sequence-region KV821594.1 1 344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821594.1 Genbank region 1 344 . + . ID=KV821594.1:1..344;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821594.1 Genbank gene 95 307 . + . ID=gene-HMPREF3052_02400;Name=HMPREF3052_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02400 GCA_001815685.1|KV821594.1 Protein Homology CDS 95 307 . + 0 ID=cds-OFO24014.1;Parent=gene-HMPREF3052_02400;Dbxref=NCBI_GP:OFO24014.1;Name=OFO24014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687827.1;locus_tag=HMPREF3052_02400;product=hypothetical protein;protein_id=OFO24014.1;transl_table=11 ##sequence-region KV821595.1 1 15641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821595.1 Genbank region 1 15641 . + . ID=KV821595.1:1..15641;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821595.1 Genbank gene 327 1340 . - . ID=gene-HMPREF3052_02405;Name=HMPREF3052_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02405 GCA_001815685.1|KV821595.1 Protein Homology CDS 327 1340 . - 0 ID=cds-OFO23920.1;Parent=gene-HMPREF3052_02405;Dbxref=NCBI_GP:OFO23920.1;Name=OFO23920.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271110.1;locus_tag=HMPREF3052_02405;product=ketol-acid reductoisomerase;protein_id=OFO23920.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 1402 1695 . - . ID=gene-HMPREF3052_02410;Name=HMPREF3052_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02410 GCA_001815685.1|KV821595.1 Protein Homology CDS 1402 1695 . - 0 ID=cds-OFO23921.1;Parent=gene-HMPREF3052_02410;Dbxref=NCBI_GP:OFO23921.1;Name=OFO23921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521031.1;locus_tag=HMPREF3052_02410;product=antibiotic biosynthesis monooxygenase;protein_id=OFO23921.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 1762 2253 . - . ID=gene-HMPREF3052_02415;Name=HMPREF3052_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02415 GCA_001815685.1|KV821595.1 Protein Homology CDS 1762 2253 . - 0 ID=cds-OFO23922.1;Parent=gene-HMPREF3052_02415;Dbxref=NCBI_GP:OFO23922.1;Name=OFO23922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003706746.1;locus_tag=HMPREF3052_02415;product=acetolactate synthase small subunit;protein_id=OFO23922.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 2264 3991 . - . ID=gene-HMPREF3052_02420;Name=HMPREF3052_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02420 GCA_001815685.1|KV821595.1 Protein Homology CDS 2264 3991 . - 0 ID=cds-OFO23923.1;Parent=gene-HMPREF3052_02420;Dbxref=NCBI_GP:OFO23923.1;Name=OFO23923.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685827.1;locus_tag=HMPREF3052_02420;product=acetolactate synthase 3 catalytic subunit;protein_id=OFO23923.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 4381 4465 . - . ID=gene-HMPREF3052_02425;Name=HMPREF3052_02425;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02425 GCA_001815685.1|KV821595.1 tRNAscan-SE tRNA 4381 4465 . - . ID=rna-HMPREF3052_02425;Parent=gene-HMPREF3052_02425;anticodon=(pos:complement(4429..4431));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02425;product=tRNA-Leu GCA_001815685.1|KV821595.1 tRNAscan-SE exon 4381 4465 . - . ID=exon-HMPREF3052_02425-1;Parent=rna-HMPREF3052_02425;anticodon=(pos:complement(4429..4431));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02425;product=tRNA-Leu GCA_001815685.1|KV821595.1 Genbank gene 4749 5411 . + . ID=gene-HMPREF3052_02430;Name=HMPREF3052_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02430 GCA_001815685.1|KV821595.1 Protein Homology CDS 4749 5411 . + 0 ID=cds-OFO23924.1;Parent=gene-HMPREF3052_02430;Dbxref=NCBI_GP:OFO23924.1;Name=OFO23924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748483.1;locus_tag=HMPREF3052_02430;product=ahpC/TSA family protein;protein_id=OFO23924.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 5494 6147 . + . ID=gene-HMPREF3052_02435;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=HMPREF3052_02435 GCA_001815685.1|KV821595.1 Protein Homology CDS 5494 6147 . + 0 ID=cds-OFO23925.1;Parent=gene-HMPREF3052_02435;Dbxref=NCBI_GP:OFO23925.1;Name=OFO23925.1;Note=short form of enzyme%3B requires HisZ for function%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms heteromultimer of HisG and HisZ;gbkey=CDS;gene=hisG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748485.1;locus_tag=HMPREF3052_02435;product=ATP phosphoribosyltransferase;protein_id=OFO23925.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 6196 6921 . + . ID=gene-HMPREF3052_02440;Name=HMPREF3052_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02440 GCA_001815685.1|KV821595.1 Protein Homology CDS 6196 6921 . + 0 ID=cds-OFO23926.1;Parent=gene-HMPREF3052_02440;Dbxref=NCBI_GP:OFO23926.1;Name=OFO23926.1;Note=NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685819.1;locus_tag=HMPREF3052_02440;product=NADPH-dependent oxidoreductase;protein_id=OFO23926.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 6993 8285 . + . ID=gene-HMPREF3052_02445;Name=HMPREF3052_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02445 GCA_001815685.1|KV821595.1 Protein Homology CDS 6993 8285 . + 0 ID=cds-OFO23927.1;Parent=gene-HMPREF3052_02445;Dbxref=NCBI_GP:OFO23927.1;Name=OFO23927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688028.1;locus_tag=HMPREF3052_02445;product=histidinol dehydrogenase;protein_id=OFO23927.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 8394 9275 . - . ID=gene-HMPREF3052_02450;Name=HMPREF3052_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02450 GCA_001815685.1|KV821595.1 Protein Homology CDS 8394 9275 . - 0 ID=cds-OFO23928.1;Parent=gene-HMPREF3052_02450;Dbxref=NCBI_GP:OFO23928.1;Name=OFO23928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680026.1;locus_tag=HMPREF3052_02450;product=oxidoreductase;protein_id=OFO23928.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 9570 10064 . + . ID=gene-HMPREF3052_02455;Name=HMPREF3052_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02455 GCA_001815685.1|KV821595.1 Protein Homology CDS 9570 10064 . + 0 ID=cds-OFO23929.1;Parent=gene-HMPREF3052_02455;Dbxref=NCBI_GP:OFO23929.1;Name=OFO23929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521040.1;locus_tag=HMPREF3052_02455;product=MarR family transcriptional regulator;protein_id=OFO23929.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 10114 11520 . + . ID=gene-HMPREF3052_02460;Name=HMPREF3052_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02460 GCA_001815685.1|KV821595.1 Protein Homology CDS 10114 11520 . + 0 ID=cds-OFO23930.1;Parent=gene-HMPREF3052_02460;Dbxref=NCBI_GP:OFO23930.1;Name=OFO23930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680009.1;locus_tag=HMPREF3052_02460;product=hypothetical protein;protein_id=OFO23930.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 11744 12934 . + . ID=gene-HMPREF3052_02465;Name=HMPREF3052_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02465 GCA_001815685.1|KV821595.1 Protein Homology CDS 11744 12934 . + 0 ID=cds-OFO23931.1;Parent=gene-HMPREF3052_02465;Dbxref=NCBI_GP:OFO23931.1;Name=OFO23931.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748499.1;locus_tag=HMPREF3052_02465;product=hemolysin D;protein_id=OFO23931.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 13036 14562 . + . ID=gene-HMPREF3052_02470;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=HMPREF3052_02470 GCA_001815685.1|KV821595.1 Protein Homology CDS 13036 14562 . + 0 ID=cds-OFO23932.1;Parent=gene-HMPREF3052_02470;Dbxref=NCBI_GP:OFO23932.1;Name=OFO23932.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680001.1;locus_tag=HMPREF3052_02470;product=multidrug resistance protein B;protein_id=OFO23932.1;transl_table=11 GCA_001815685.1|KV821595.1 Genbank gene 14605 15522 . - . ID=gene-HMPREF3052_02475;Name=HMPREF3052_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02475 GCA_001815685.1|KV821595.1 Protein Homology CDS 14605 15522 . - 0 ID=cds-OFO23933.1;Parent=gene-HMPREF3052_02475;Dbxref=NCBI_GP:OFO23933.1;Name=OFO23933.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685798.1;locus_tag=HMPREF3052_02475;product=homoserine kinase;protein_id=OFO23933.1;transl_table=11 ##sequence-region KV821596.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821596.1 Genbank region 1 537 . + . ID=KV821596.1:1..537;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821596.1 Genbank pseudogene 1 537 . + . ID=gene-HMPREF3052_02480;Name=HMPREF3052_02480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02480;pseudo=true GCA_001815685.1|KV821596.1 Protein Homology CDS 1 537 . + 2 ID=cds-HMPREF3052_02480;Parent=gene-HMPREF3052_02480;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686493.1;locus_tag=HMPREF3052_02480;product=zonular occludens toxin;pseudo=true;transl_table=11 ##sequence-region KV821597.1 1 18880 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821597.1 Genbank region 1 18880 . + . ID=KV821597.1:1..18880;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821597.1 Genbank pseudogene 1 606 . - . ID=gene-HMPREF3052_02485;Name=HMPREF3052_02485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02485;pseudo=true GCA_001815685.1|KV821597.1 Protein Homology CDS 1 606 . - 0 ID=cds-HMPREF3052_02485;Parent=gene-HMPREF3052_02485;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683534.1;locus_tag=HMPREF3052_02485;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 653 1303 . - . ID=gene-HMPREF3052_02490;Name=HMPREF3052_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02490 GCA_001815685.1|KV821597.1 Protein Homology CDS 653 1303 . - 0 ID=cds-OFO23893.1;Parent=gene-HMPREF3052_02490;Dbxref=NCBI_GP:OFO23893.1;Name=OFO23893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683359.1;locus_tag=HMPREF3052_02490;product=hypothetical protein;protein_id=OFO23893.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 1535 3985 . - . ID=gene-HMPREF3052_02495;Name=HMPREF3052_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02495 GCA_001815685.1|KV821597.1 Protein Homology CDS 1535 3985 . - 0 ID=cds-OFO23881.1;Parent=gene-HMPREF3052_02495;Dbxref=NCBI_GP:OFO23881.1;Name=OFO23881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746753.1;locus_tag=HMPREF3052_02495;product=hypothetical protein;protein_id=OFO23881.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 4048 4353 . - . ID=gene-HMPREF3052_02500;Name=HMPREF3052_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02500 GCA_001815685.1|KV821597.1 Protein Homology CDS 4048 4353 . - 0 ID=cds-OFO23882.1;Parent=gene-HMPREF3052_02500;Dbxref=NCBI_GP:OFO23882.1;Name=OFO23882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016901062.1;locus_tag=HMPREF3052_02500;product=hypothetical protein;protein_id=OFO23882.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 4363 4752 . - . ID=gene-HMPREF3052_02505;Name=HMPREF3052_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02505 GCA_001815685.1|KV821597.1 Protein Homology CDS 4363 4752 . - 0 ID=cds-OFO23883.1;Parent=gene-HMPREF3052_02505;Dbxref=NCBI_GP:OFO23883.1;Name=OFO23883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746751.1;locus_tag=HMPREF3052_02505;product=type VI secretion protein;protein_id=OFO23883.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 5610 6074 . + . ID=gene-HMPREF3052_02510;Name=HMPREF3052_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02510 GCA_001815685.1|KV821597.1 GeneMarkS+ CDS 5610 6074 . + 0 ID=cds-OFO23884.1;Parent=gene-HMPREF3052_02510;Dbxref=NCBI_GP:OFO23884.1;Name=OFO23884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02510;product=hypothetical protein;protein_id=OFO23884.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 6086 6979 . + . ID=gene-HMPREF3052_02515;Name=HMPREF3052_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02515 GCA_001815685.1|KV821597.1 Protein Homology CDS 6086 6979 . + 0 ID=cds-OFO23885.1;Parent=gene-HMPREF3052_02515;Dbxref=NCBI_GP:OFO23885.1;Name=OFO23885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683260.1;locus_tag=HMPREF3052_02515;product=hypothetical protein;protein_id=OFO23885.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 6982 7707 . + . ID=gene-HMPREF3052_02520;Name=HMPREF3052_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02520 GCA_001815685.1|KV821597.1 Protein Homology CDS 6982 7707 . + 0 ID=cds-OFO23886.1;Parent=gene-HMPREF3052_02520;Dbxref=NCBI_GP:OFO23886.1;Name=OFO23886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683393.1;locus_tag=HMPREF3052_02520;product=type IV secretion system protein VirB9;protein_id=OFO23886.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 7710 8879 . + . ID=gene-HMPREF3052_02525;Name=HMPREF3052_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02525 GCA_001815685.1|KV821597.1 Protein Homology CDS 7710 8879 . + 0 ID=cds-OFO23887.1;Parent=gene-HMPREF3052_02525;Dbxref=NCBI_GP:OFO23887.1;Name=OFO23887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683560.1;locus_tag=HMPREF3052_02525;product=hypothetical protein;protein_id=OFO23887.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 9210 10901 . + . ID=gene-HMPREF3052_02530;Name=HMPREF3052_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02530 GCA_001815685.1|KV821597.1 Protein Homology CDS 9210 10901 . + 0 ID=cds-OFO23888.1;Parent=gene-HMPREF3052_02530;Dbxref=NCBI_GP:OFO23888.1;Name=OFO23888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746738.1;locus_tag=HMPREF3052_02530;product=hypothetical protein;protein_id=OFO23888.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 11088 11618 . + . ID=gene-HMPREF3052_02535;Name=HMPREF3052_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02535 GCA_001815685.1|KV821597.1 Protein Homology CDS 11088 11618 . + 0 ID=cds-OFO23894.1;Parent=gene-HMPREF3052_02535;Dbxref=NCBI_GP:OFO23894.1;Name=OFO23894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746737.1;locus_tag=HMPREF3052_02535;product=hypothetical protein;protein_id=OFO23894.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 11630 13339 . + . ID=gene-HMPREF3052_02540;Name=HMPREF3052_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02540 GCA_001815685.1|KV821597.1 GeneMarkS+ CDS 11630 13339 . + 0 ID=cds-OFO23889.1;Parent=gene-HMPREF3052_02540;Dbxref=NCBI_GP:OFO23889.1;Name=OFO23889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02540;product=hypothetical protein;protein_id=OFO23889.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 13424 14443 . + . ID=gene-HMPREF3052_02545;Name=HMPREF3052_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02545 GCA_001815685.1|KV821597.1 Protein Homology CDS 13424 14443 . + 0 ID=cds-OFO23890.1;Parent=gene-HMPREF3052_02545;Dbxref=NCBI_GP:OFO23890.1;Name=OFO23890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683661.1;locus_tag=HMPREF3052_02545;product=P-type DNA transfer ATPase VirB11;protein_id=OFO23890.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 14715 15026 . + . ID=gene-HMPREF3052_02550;Name=HMPREF3052_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02550 GCA_001815685.1|KV821597.1 Protein Homology CDS 14715 15026 . + 0 ID=cds-OFO23891.1;Parent=gene-HMPREF3052_02550;Dbxref=NCBI_GP:OFO23891.1;Name=OFO23891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680714.1;locus_tag=HMPREF3052_02550;product=transcriptional regulator;protein_id=OFO23891.1;transl_table=11 GCA_001815685.1|KV821597.1 Genbank pseudogene 15101 15693 . + . ID=gene-HMPREF3052_02555;Name=HMPREF3052_02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02555;pseudo=true GCA_001815685.1|KV821597.1 Protein Homology CDS 15101 15693 . + 0 ID=cds-HMPREF3052_02555;Parent=gene-HMPREF3052_02555;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823190.1;locus_tag=HMPREF3052_02555;product=NADH oxidase;pseudo=true;transl_table=11 GCA_001815685.1|KV821597.1 Genbank pseudogene 15740 16153 . + . ID=gene-HMPREF3052_02560;Name=HMPREF3052_02560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02560;pseudo=true GCA_001815685.1|KV821597.1 Protein Homology CDS 15740 16153 . + 0 ID=cds-HMPREF3052_02560;Parent=gene-HMPREF3052_02560;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005545441.1;locus_tag=HMPREF3052_02560;product=lipoprotein HlpB;pseudo=true;transl_table=11 GCA_001815685.1|KV821597.1 Genbank gene 16376 18712 . + . ID=gene-HMPREF3052_02565;Name=HMPREF3052_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02565 GCA_001815685.1|KV821597.1 GeneMarkS+ CDS 16376 18712 . + 0 ID=cds-OFO23892.1;Parent=gene-HMPREF3052_02565;Dbxref=NCBI_GP:OFO23892.1;Name=OFO23892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02565;product=hypothetical protein;protein_id=OFO23892.1;transl_table=11 ##sequence-region KV821598.1 1 33389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821598.1 Genbank region 1 33389 . + . ID=KV821598.1:1..33389;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821598.1 Genbank pseudogene 1 363 . - . ID=gene-HMPREF3052_02570;Name=HMPREF3052_02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02570;pseudo=true GCA_001815685.1|KV821598.1 Protein Homology CDS 1 363 . - 0 ID=cds-HMPREF3052_02570;Parent=gene-HMPREF3052_02570;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448484.1;locus_tag=HMPREF3052_02570;product=exodeoxyribonuclease III;pseudo=true;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 278 550 . + . ID=gene-HMPREF3052_02575;Name=HMPREF3052_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02575 GCA_001815685.1|KV821598.1 GeneMarkS+ CDS 278 550 . + 0 ID=cds-OFO30181.1;Parent=gene-HMPREF3052_02575;Dbxref=NCBI_GP:OFO30181.1;Name=OFO30181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02575;product=hypothetical protein;protein_id=OFO30181.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 531 809 . - . ID=gene-HMPREF3052_02580;Name=HMPREF3052_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02580 GCA_001815685.1|KV821598.1 Protein Homology CDS 531 809 . - 0 ID=cds-OFO30182.1;Parent=gene-HMPREF3052_02580;Dbxref=NCBI_GP:OFO30182.1;Name=OFO30182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520933.1;locus_tag=HMPREF3052_02580;product=transcriptional regulator;protein_id=OFO30182.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 1224 3005 . - . ID=gene-HMPREF3052_02585;Name=HMPREF3052_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02585 GCA_001815685.1|KV821598.1 Protein Homology CDS 1224 3005 . - 0 ID=cds-OFO30183.1;Parent=gene-HMPREF3052_02585;Dbxref=NCBI_GP:OFO30183.1;Name=OFO30183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683780.1;locus_tag=HMPREF3052_02585;product=peptide ABC transporter substrate-binding protein;protein_id=OFO30183.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 3105 4307 . - . ID=gene-HMPREF3052_02590;Name=HMPREF3052_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02590 GCA_001815685.1|KV821598.1 Protein Homology CDS 3105 4307 . - 0 ID=cds-OFO30184.1;Parent=gene-HMPREF3052_02590;Dbxref=NCBI_GP:OFO30184.1;Name=OFO30184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520936.1;locus_tag=HMPREF3052_02590;product=hypothetical protein;protein_id=OFO30184.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 4407 5012 . + . ID=gene-HMPREF3052_02595;Name=HMPREF3052_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02595 GCA_001815685.1|KV821598.1 Protein Homology CDS 4407 5012 . + 0 ID=cds-OFO30185.1;Parent=gene-HMPREF3052_02595;Dbxref=NCBI_GP:OFO30185.1;Name=OFO30185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683927.1;locus_tag=HMPREF3052_02595;product=NAD(P)H-quinone oxidoreductase;protein_id=OFO30185.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 5224 7407 . + . ID=gene-HMPREF3052_02600;Name=HMPREF3052_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02600 GCA_001815685.1|KV821598.1 Protein Homology CDS 5224 7407 . + 0 ID=cds-OFO30186.1;Parent=gene-HMPREF3052_02600;Dbxref=NCBI_GP:OFO30186.1;Name=OFO30186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520938.1;locus_tag=HMPREF3052_02600;product=outer membrane ferripyoverdine receptor;protein_id=OFO30186.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 7595 8638 . - . ID=gene-HMPREF3052_02605;Name=HMPREF3052_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02605 GCA_001815685.1|KV821598.1 Protein Homology CDS 7595 8638 . - 0 ID=cds-OFO30187.1;Parent=gene-HMPREF3052_02605;Dbxref=NCBI_GP:OFO30187.1;Name=OFO30187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683923.1;locus_tag=HMPREF3052_02605;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=OFO30187.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 8931 10433 . - . ID=gene-HMPREF3052_02610;Name=HMPREF3052_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02610 GCA_001815685.1|KV821598.1 Protein Homology CDS 8931 10433 . - 0 ID=cds-OFO30188.1;Parent=gene-HMPREF3052_02610;Dbxref=NCBI_GP:OFO30188.1;Name=OFO30188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676975.1;locus_tag=HMPREF3052_02610;product=alpha/beta hydrolase;protein_id=OFO30188.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 10719 12194 . - . ID=gene-HMPREF3052_02615;Name=HMPREF3052_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02615 GCA_001815685.1|KV821598.1 Protein Homology CDS 10719 12194 . - 0 ID=cds-OFO30210.1;Parent=gene-HMPREF3052_02615;Dbxref=NCBI_GP:OFO30210.1;Name=OFO30210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741098.1;locus_tag=HMPREF3052_02615;product=hypothetical protein;protein_id=OFO30210.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 12351 12722 . - . ID=gene-HMPREF3052_02620;Name=HMPREF3052_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02620 GCA_001815685.1|KV821598.1 Protein Homology CDS 12351 12722 . - 0 ID=cds-OFO30189.1;Parent=gene-HMPREF3052_02620;Dbxref=NCBI_GP:OFO30189.1;Name=OFO30189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749158.1;locus_tag=HMPREF3052_02620;product=hypothetical protein;protein_id=OFO30189.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 12895 13590 . - . ID=gene-HMPREF3052_02625;Name=HMPREF3052_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02625 GCA_001815685.1|KV821598.1 Protein Homology CDS 12895 13590 . - 0 ID=cds-OFO30190.1;Parent=gene-HMPREF3052_02625;Dbxref=NCBI_GP:OFO30190.1;Name=OFO30190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768283.1;locus_tag=HMPREF3052_02625;product=hypothetical protein;protein_id=OFO30190.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 13640 14371 . - . ID=gene-HMPREF3052_02630;Name=HMPREF3052_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02630 GCA_001815685.1|KV821598.1 Protein Homology CDS 13640 14371 . - 0 ID=cds-OFO30191.1;Parent=gene-HMPREF3052_02630;Dbxref=NCBI_GP:OFO30191.1;Name=OFO30191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683879.1;locus_tag=HMPREF3052_02630;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFO30191.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 14443 15021 . - . ID=gene-HMPREF3052_02635;Name=HMPREF3052_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02635 GCA_001815685.1|KV821598.1 Protein Homology CDS 14443 15021 . - 0 ID=cds-OFO30192.1;Parent=gene-HMPREF3052_02635;Dbxref=NCBI_GP:OFO30192.1;Name=OFO30192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749152.1;locus_tag=HMPREF3052_02635;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=OFO30192.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 15042 16103 . - . ID=gene-HMPREF3052_02640;Name=HMPREF3052_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02640 GCA_001815685.1|KV821598.1 Protein Homology CDS 15042 16103 . - 0 ID=cds-OFO30193.1;Parent=gene-HMPREF3052_02640;Dbxref=NCBI_GP:OFO30193.1;Name=OFO30193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683783.1;locus_tag=HMPREF3052_02640;product=glycosyl transferase family 1;protein_id=OFO30193.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 16103 16573 . - . ID=gene-HMPREF3052_02645;Name=HMPREF3052_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02645 GCA_001815685.1|KV821598.1 Protein Homology CDS 16103 16573 . - 0 ID=cds-OFO30194.1;Parent=gene-HMPREF3052_02645;Dbxref=NCBI_GP:OFO30194.1;Name=OFO30194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683818.1;locus_tag=HMPREF3052_02645;product=cell surface protein;protein_id=OFO30194.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 16667 17908 . - . ID=gene-HMPREF3052_02650;Name=HMPREF3052_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02650 GCA_001815685.1|KV821598.1 Protein Homology CDS 16667 17908 . - 0 ID=cds-OFO30195.1;Parent=gene-HMPREF3052_02650;Dbxref=NCBI_GP:OFO30195.1;Name=OFO30195.1;Note=tryptophan transporter of high affinity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749145.1;locus_tag=HMPREF3052_02650;product=tryptophan permease;protein_id=OFO30195.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 18038 19111 . - . ID=gene-HMPREF3052_02655;Name=HMPREF3052_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02655 GCA_001815685.1|KV821598.1 Protein Homology CDS 18038 19111 . - 0 ID=cds-OFO30196.1;Parent=gene-HMPREF3052_02655;Dbxref=NCBI_GP:OFO30196.1;Name=OFO30196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683946.1;locus_tag=HMPREF3052_02655;product=hypothetical protein;protein_id=OFO30196.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 19197 20048 . - . ID=gene-HMPREF3052_02660;Name=HMPREF3052_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02660 GCA_001815685.1|KV821598.1 Protein Homology CDS 19197 20048 . - 0 ID=cds-OFO30197.1;Parent=gene-HMPREF3052_02660;Dbxref=NCBI_GP:OFO30197.1;Name=OFO30197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574295.1;locus_tag=HMPREF3052_02660;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=OFO30197.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 20250 20327 . + . ID=gene-HMPREF3052_02665;Name=HMPREF3052_02665;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02665 GCA_001815685.1|KV821598.1 tRNAscan-SE tRNA 20250 20327 . + . ID=rna-HMPREF3052_02665;Parent=gene-HMPREF3052_02665;anticodon=(pos:20285..20287);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02665;product=tRNA-Pro GCA_001815685.1|KV821598.1 tRNAscan-SE exon 20250 20327 . + . ID=exon-HMPREF3052_02665-1;Parent=rna-HMPREF3052_02665;anticodon=(pos:20285..20287);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02665;product=tRNA-Pro GCA_001815685.1|KV821598.1 Genbank gene 20355 20431 . + . ID=gene-HMPREF3052_02670;Name=HMPREF3052_02670;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02670 GCA_001815685.1|KV821598.1 tRNAscan-SE tRNA 20355 20431 . + . ID=rna-HMPREF3052_02670;Parent=gene-HMPREF3052_02670;anticodon=(pos:20389..20391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02670;product=tRNA-Arg GCA_001815685.1|KV821598.1 tRNAscan-SE exon 20355 20431 . + . ID=exon-HMPREF3052_02670-1;Parent=rna-HMPREF3052_02670;anticodon=(pos:20389..20391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02670;product=tRNA-Arg GCA_001815685.1|KV821598.1 Genbank gene 20441 20516 . + . ID=gene-HMPREF3052_02675;Name=HMPREF3052_02675;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02675 GCA_001815685.1|KV821598.1 tRNAscan-SE tRNA 20441 20516 . + . ID=rna-HMPREF3052_02675;Parent=gene-HMPREF3052_02675;anticodon=(pos:20474..20476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02675;product=tRNA-His GCA_001815685.1|KV821598.1 tRNAscan-SE exon 20441 20516 . + . ID=exon-HMPREF3052_02675-1;Parent=rna-HMPREF3052_02675;anticodon=(pos:20474..20476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02675;product=tRNA-His GCA_001815685.1|KV821598.1 Genbank gene 20778 21281 . + . ID=gene-HMPREF3052_02680;Name=HMPREF3052_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02680 GCA_001815685.1|KV821598.1 Protein Homology CDS 20778 21281 . + 0 ID=cds-OFO30198.1;Parent=gene-HMPREF3052_02680;Dbxref=NCBI_GP:OFO30198.1;Name=OFO30198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520955.1;locus_tag=HMPREF3052_02680;product=ADP-heptose synthase;protein_id=OFO30198.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 21278 23038 . + . ID=gene-HMPREF3052_02685;Name=HMPREF3052_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02685 GCA_001815685.1|KV821598.1 Protein Homology CDS 21278 23038 . + 0 ID=cds-OFO30199.1;Parent=gene-HMPREF3052_02685;Dbxref=NCBI_GP:OFO30199.1;Name=OFO30199.1;Note=activates biotin to form biotinyl-5'-adenylate and transfers the biotin moiety to biotin-accepting proteins and catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis%3B type III%3B type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520956.1;locus_tag=HMPREF3052_02685;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=OFO30199.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 23054 23896 . + . ID=gene-HMPREF3052_02690;Name=HMPREF3052_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02690 GCA_001815685.1|KV821598.1 Protein Homology CDS 23054 23896 . + 0 ID=cds-OFO30200.1;Parent=gene-HMPREF3052_02690;Dbxref=NCBI_GP:OFO30200.1;Name=OFO30200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520957.1;locus_tag=HMPREF3052_02690;product=cell division protein;protein_id=OFO30200.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 24271 24789 . - . ID=gene-HMPREF3052_02695;Name=HMPREF3052_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02695 GCA_001815685.1|KV821598.1 Protein Homology CDS 24271 24789 . - 0 ID=cds-OFO30201.1;Parent=gene-HMPREF3052_02695;Dbxref=NCBI_GP:OFO30201.1;Name=OFO30201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758046.1;locus_tag=HMPREF3052_02695;product=hypothetical protein;protein_id=OFO30201.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 25046 26488 . + . ID=gene-HMPREF3052_02700;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=HMPREF3052_02700 GCA_001815685.1|KV821598.1 Protein Homology CDS 25046 26488 . + 0 ID=cds-OFO30202.1;Parent=gene-HMPREF3052_02700;Dbxref=NCBI_GP:OFO30202.1;Name=OFO30202.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174858.1;locus_tag=HMPREF3052_02700;product=metalloprotease TldD;protein_id=OFO30202.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 26640 27299 . + . ID=gene-HMPREF3052_02705;Name=HMPREF3052_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02705 GCA_001815685.1|KV821598.1 Protein Homology CDS 26640 27299 . + 0 ID=cds-OFO30203.1;Parent=gene-HMPREF3052_02705;Dbxref=NCBI_GP:OFO30203.1;Name=OFO30203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784019.1;locus_tag=HMPREF3052_02705;product=amino acid ABC transporter permease;protein_id=OFO30203.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 27289 27957 . + . ID=gene-HMPREF3052_02710;Name=HMPREF3052_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02710 GCA_001815685.1|KV821598.1 Protein Homology CDS 27289 27957 . + 0 ID=cds-OFO30204.1;Parent=gene-HMPREF3052_02710;Dbxref=NCBI_GP:OFO30204.1;Name=OFO30204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748034.1;locus_tag=HMPREF3052_02710;product=amino acid ABC transporter permease;protein_id=OFO30204.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 27959 28690 . + . ID=gene-HMPREF3052_02715;Name=HMPREF3052_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02715 GCA_001815685.1|KV821598.1 Protein Homology CDS 27959 28690 . + 0 ID=cds-OFO30205.1;Parent=gene-HMPREF3052_02715;Dbxref=NCBI_GP:OFO30205.1;Name=OFO30205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273553.1;locus_tag=HMPREF3052_02715;product=glutamine ABC transporter ATP-binding protein;protein_id=OFO30205.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 28765 29619 . + . ID=gene-HMPREF3052_02720;Name=HMPREF3052_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02720 GCA_001815685.1|KV821598.1 Protein Homology CDS 28765 29619 . + 0 ID=cds-OFO30206.1;Parent=gene-HMPREF3052_02720;Dbxref=NCBI_GP:OFO30206.1;Name=OFO30206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712931.1;locus_tag=HMPREF3052_02720;product=ABC transporter substrate-binding protein;protein_id=OFO30206.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 30036 30848 . + . ID=gene-HMPREF3052_02725;Name=HMPREF3052_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02725 GCA_001815685.1|KV821598.1 Protein Homology CDS 30036 30848 . + 0 ID=cds-OFO30207.1;Parent=gene-HMPREF3052_02725;Dbxref=NCBI_GP:OFO30207.1;Name=OFO30207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520961.1;locus_tag=HMPREF3052_02725;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=OFO30207.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 30933 31727 . - . ID=gene-HMPREF3052_02730;Name=HMPREF3052_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02730 GCA_001815685.1|KV821598.1 Protein Homology CDS 30933 31727 . - 0 ID=cds-OFO30208.1;Parent=gene-HMPREF3052_02730;Dbxref=NCBI_GP:OFO30208.1;Name=OFO30208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009119130.1;locus_tag=HMPREF3052_02730;product=3'-5' exonuclease;protein_id=OFO30208.1;transl_table=11 GCA_001815685.1|KV821598.1 Genbank gene 32424 33293 . - . ID=gene-HMPREF3052_02735;Name=HMPREF3052_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02735 GCA_001815685.1|KV821598.1 Protein Homology CDS 32424 33293 . - 0 ID=cds-OFO30209.1;Parent=gene-HMPREF3052_02735;Dbxref=NCBI_GP:OFO30209.1;Name=OFO30209.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684220.1;locus_tag=HMPREF3052_02735;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=OFO30209.1;transl_table=11 ##sequence-region KV821599.1 1 3370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821599.1 Genbank region 1 3370 . + . ID=KV821599.1:1..3370;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821599.1 Genbank pseudogene 1 299 . - . ID=gene-HMPREF3052_02740;Name=HMPREF3052_02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02740;pseudo=true GCA_001815685.1|KV821599.1 Protein Homology CDS 1 299 . - 0 ID=cds-HMPREF3052_02740;Parent=gene-HMPREF3052_02740;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118380.1;locus_tag=HMPREF3052_02740;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821599.1 Genbank gene 293 958 . - . ID=gene-HMPREF3052_02745;Name=HMPREF3052_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02745 GCA_001815685.1|KV821599.1 Protein Homology CDS 293 958 . - 0 ID=cds-OFO30148.1;Parent=gene-HMPREF3052_02745;Dbxref=NCBI_GP:OFO30148.1;Name=OFO30148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520682.1;locus_tag=HMPREF3052_02745;product=translocation protein TolB precursor;protein_id=OFO30148.1;transl_table=11 GCA_001815685.1|KV821599.1 Genbank gene 955 1827 . - . ID=gene-HMPREF3052_02750;Name=HMPREF3052_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02750 GCA_001815685.1|KV821599.1 Protein Homology CDS 955 1827 . - 0 ID=cds-OFO30149.1;Parent=gene-HMPREF3052_02750;Dbxref=NCBI_GP:OFO30149.1;Name=OFO30149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520683.1;locus_tag=HMPREF3052_02750;product=recombinase;protein_id=OFO30149.1;transl_table=11 GCA_001815685.1|KV821599.1 Genbank gene 2000 2311 . - . ID=gene-HMPREF3052_02755;Name=HMPREF3052_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02755 GCA_001815685.1|KV821599.1 GeneMarkS+ CDS 2000 2311 . - 0 ID=cds-OFO30150.1;Parent=gene-HMPREF3052_02755;Dbxref=NCBI_GP:OFO30150.1;Name=OFO30150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02755;product=hypothetical protein;protein_id=OFO30150.1;transl_table=11 GCA_001815685.1|KV821599.1 Genbank gene 2311 2493 . - . ID=gene-HMPREF3052_02760;Name=HMPREF3052_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02760 GCA_001815685.1|KV821599.1 GeneMarkS+ CDS 2311 2493 . - 0 ID=cds-OFO30151.1;Parent=gene-HMPREF3052_02760;Dbxref=NCBI_GP:OFO30151.1;Name=OFO30151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02760;product=hypothetical protein;protein_id=OFO30151.1;transl_table=11 GCA_001815685.1|KV821599.1 Genbank gene 2502 2780 . - . ID=gene-HMPREF3052_02765;Name=HMPREF3052_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02765 GCA_001815685.1|KV821599.1 GeneMarkS+ CDS 2502 2780 . - 0 ID=cds-OFO30152.1;Parent=gene-HMPREF3052_02765;Dbxref=NCBI_GP:OFO30152.1;Name=OFO30152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02765;product=hypothetical protein;protein_id=OFO30152.1;transl_table=11 GCA_001815685.1|KV821599.1 Genbank gene 2777 3175 . - . ID=gene-HMPREF3052_02770;Name=HMPREF3052_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02770 GCA_001815685.1|KV821599.1 GeneMarkS+ CDS 2777 3175 . - 0 ID=cds-OFO30153.1;Parent=gene-HMPREF3052_02770;Dbxref=NCBI_GP:OFO30153.1;Name=OFO30153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02770;product=hypothetical protein;protein_id=OFO30153.1;transl_table=11 ##sequence-region KV821600.1 1 88605 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821600.1 Genbank region 1 88605 . + . ID=KV821600.1:1..88605;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821600.1 Genbank pseudogene 1 1353 . - . ID=gene-HMPREF3052_02775;Name=HMPREF3052_02775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02775;pseudo=true GCA_001815685.1|KV821600.1 GeneMarkS+ CDS 1 1353 . - 0 ID=cds-HMPREF3052_02775;Parent=gene-HMPREF3052_02775;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02775;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 2442 4022 . - . ID=gene-HMPREF3052_02780;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=HMPREF3052_02780 GCA_001815685.1|KV821600.1 Protein Homology CDS 2442 4022 . - 0 ID=cds-OFO30068.1;Parent=gene-HMPREF3052_02780;Dbxref=NCBI_GP:OFO30068.1;Name=OFO30068.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448532.1;locus_tag=HMPREF3052_02780;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=OFO30068.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 4186 5355 . - . ID=gene-HMPREF3052_02785;Name=HMPREF3052_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02785 GCA_001815685.1|KV821600.1 Protein Homology CDS 4186 5355 . - 0 ID=cds-OFO30110.1;Parent=gene-HMPREF3052_02785;Dbxref=NCBI_GP:OFO30110.1;Name=OFO30110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010360679.1;locus_tag=HMPREF3052_02785;product=chloride channel protein;protein_id=OFO30110.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 5465 6280 . - . ID=gene-HMPREF3052_02790;Name=HMPREF3052_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02790 GCA_001815685.1|KV821600.1 Protein Homology CDS 5465 6280 . - 0 ID=cds-OFO30069.1;Parent=gene-HMPREF3052_02790;Dbxref=NCBI_GP:OFO30069.1;Name=OFO30069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518783.1;locus_tag=HMPREF3052_02790;product=hypothetical protein;protein_id=OFO30069.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 6347 7222 . - . ID=gene-HMPREF3052_02795;Name=HMPREF3052_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02795 GCA_001815685.1|KV821600.1 Protein Homology CDS 6347 7222 . - 0 ID=cds-OFO30070.1;Parent=gene-HMPREF3052_02795;Dbxref=NCBI_GP:OFO30070.1;Name=OFO30070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684265.1;locus_tag=HMPREF3052_02795;product=hypothetical protein;protein_id=OFO30070.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 7404 7643 . - . ID=gene-HMPREF3052_02800;Name=HMPREF3052_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02800 GCA_001815685.1|KV821600.1 Protein Homology CDS 7404 7643 . - 0 ID=cds-OFO30071.1;Parent=gene-HMPREF3052_02800;Dbxref=NCBI_GP:OFO30071.1;Name=OFO30071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711291.1;locus_tag=HMPREF3052_02800;product=Fis family transcriptional regulator;protein_id=OFO30071.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 7697 8701 . - . ID=gene-HMPREF3052_02805;Name=HMPREF3052_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02805 GCA_001815685.1|KV821600.1 Protein Homology CDS 7697 8701 . - 0 ID=cds-OFO30072.1;Parent=gene-HMPREF3052_02805;Dbxref=NCBI_GP:OFO30072.1;Name=OFO30072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017915088.1;locus_tag=HMPREF3052_02805;product=tRNA dihydrouridine synthase DusB;protein_id=OFO30072.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 8833 9483 . - . ID=gene-HMPREF3052_02810;Name=HMPREF3052_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02810 GCA_001815685.1|KV821600.1 Protein Homology CDS 8833 9483 . - 0 ID=cds-OFO30073.1;Parent=gene-HMPREF3052_02810;Dbxref=NCBI_GP:OFO30073.1;Name=OFO30073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684266.1;locus_tag=HMPREF3052_02810;product=peptidase M50;protein_id=OFO30073.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 9546 10790 . - . ID=gene-HMPREF3052_02815;Name=HMPREF3052_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02815 GCA_001815685.1|KV821600.1 Protein Homology CDS 9546 10790 . - 0 ID=cds-OFO30074.1;Parent=gene-HMPREF3052_02815;Dbxref=NCBI_GP:OFO30074.1;Name=OFO30074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684274.1;locus_tag=HMPREF3052_02815;product=hypothetical protein;protein_id=OFO30074.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 11000 12418 . - . ID=gene-HMPREF3052_02820;Name=HMPREF3052_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02820 GCA_001815685.1|KV821600.1 Protein Homology CDS 11000 12418 . - 0 ID=cds-OFO30075.1;Parent=gene-HMPREF3052_02820;Dbxref=NCBI_GP:OFO30075.1;Name=OFO30075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245865.1;locus_tag=HMPREF3052_02820;product=type I glutamate--ammonia ligase;protein_id=OFO30075.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 12656 13045 . - . ID=gene-HMPREF3052_02825;Name=HMPREF3052_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02825 GCA_001815685.1|KV821600.1 Protein Homology CDS 12656 13045 . - 0 ID=cds-OFO30076.1;Parent=gene-HMPREF3052_02825;Dbxref=NCBI_GP:OFO30076.1;Name=OFO30076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233517.1;locus_tag=HMPREF3052_02825;product=hypothetical protein;protein_id=OFO30076.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 13237 14046 . + . ID=gene-HMPREF3052_02830;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=HMPREF3052_02830 GCA_001815685.1|KV821600.1 Protein Homology CDS 13237 14046 . + 0 ID=cds-OFO30077.1;Parent=gene-HMPREF3052_02830;Dbxref=NCBI_GP:OFO30077.1;Name=OFO30077.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676531.1;locus_tag=HMPREF3052_02830;product=shikimate dehydrogenase;protein_id=OFO30077.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 14049 14750 . + . ID=gene-HMPREF3052_02835;Name=HMPREF3052_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02835 GCA_001815685.1|KV821600.1 Protein Homology CDS 14049 14750 . + 0 ID=cds-OFO30078.1;Parent=gene-HMPREF3052_02835;Dbxref=NCBI_GP:OFO30078.1;Name=OFO30078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756572.1;locus_tag=HMPREF3052_02835;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=OFO30078.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 14790 16010 . - . ID=gene-HMPREF3052_02840;Name=HMPREF3052_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02840 GCA_001815685.1|KV821600.1 Protein Homology CDS 14790 16010 . - 0 ID=cds-OFO30079.1;Parent=gene-HMPREF3052_02840;Dbxref=NCBI_GP:OFO30079.1;Name=OFO30079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748437.1;locus_tag=HMPREF3052_02840;product=nicotinate phosphoribosyltransferase;protein_id=OFO30079.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 16107 17402 . - . ID=gene-HMPREF3052_02845;Name=HMPREF3052_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02845 GCA_001815685.1|KV821600.1 Protein Homology CDS 16107 17402 . - 0 ID=cds-OFO30080.1;Parent=gene-HMPREF3052_02845;Dbxref=NCBI_GP:OFO30080.1;Name=OFO30080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748435.1;locus_tag=HMPREF3052_02845;product=peptidase M23;protein_id=OFO30080.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 17767 18747 . + . ID=gene-HMPREF3052_02850;Name=HMPREF3052_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02850 GCA_001815685.1|KV821600.1 Protein Homology CDS 17767 18747 . + 0 ID=cds-OFO30081.1;Parent=gene-HMPREF3052_02850;Dbxref=NCBI_GP:OFO30081.1;Name=OFO30081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518798.1;locus_tag=HMPREF3052_02850;product=hypothetical protein;protein_id=OFO30081.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 18754 19827 . - . ID=gene-HMPREF3052_02855;Name=HMPREF3052_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02855 GCA_001815685.1|KV821600.1 Protein Homology CDS 18754 19827 . - 0 ID=cds-OFO30082.1;Parent=gene-HMPREF3052_02855;Dbxref=NCBI_GP:OFO30082.1;Name=OFO30082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518799.1;locus_tag=HMPREF3052_02855;product=putative lipopolysaccharide heptosyltransferase III;protein_id=OFO30082.1;transl_table=11 GCA_001815685.1|KV821600.1 cmsearch binding_site 19976 20020 . + . ID=id-KV821600.1:19976..20020;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001815685.1|KV821600.1 Genbank gene 20024 20497 . + . ID=gene-HMPREF3052_02860;Name=HMPREF3052_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02860 GCA_001815685.1|KV821600.1 Protein Homology CDS 20024 20497 . + 0 ID=cds-OFO30083.1;Parent=gene-HMPREF3052_02860;Dbxref=NCBI_GP:OFO30083.1;Name=OFO30083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002249967.1;locus_tag=HMPREF3052_02860;product=7-cyano-7-deazaguanine reductase;protein_id=OFO30083.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 20597 21274 . + . ID=gene-HMPREF3052_02865;Name=HMPREF3052_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02865 GCA_001815685.1|KV821600.1 Protein Homology CDS 20597 21274 . + 0 ID=cds-OFO30084.1;Parent=gene-HMPREF3052_02865;Dbxref=NCBI_GP:OFO30084.1;Name=OFO30084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748425.1;locus_tag=HMPREF3052_02865;product=hypothetical protein;protein_id=OFO30084.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 21342 22526 . - . ID=gene-HMPREF3052_02870;Name=HMPREF3052_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02870 GCA_001815685.1|KV821600.1 Protein Homology CDS 21342 22526 . - 0 ID=cds-OFO30085.1;Parent=gene-HMPREF3052_02870;Dbxref=NCBI_GP:OFO30085.1;Name=OFO30085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235438.1;locus_tag=HMPREF3052_02870;product=ubiquinone biosynthesis protein UbiH;protein_id=OFO30085.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 22801 23073 . - . ID=gene-HMPREF3052_02875;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF3052_02875 GCA_001815685.1|KV821600.1 Protein Homology CDS 22801 23073 . - 0 ID=cds-OFO30086.1;Parent=gene-HMPREF3052_02875;Dbxref=NCBI_GP:OFO30086.1;Name=OFO30086.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686478.1;locus_tag=HMPREF3052_02875;product=50S ribosomal protein L27;protein_id=OFO30086.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 23101 23421 . - . ID=gene-HMPREF3052_02880;Name=HMPREF3052_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02880 GCA_001815685.1|KV821600.1 Protein Homology CDS 23101 23421 . - 0 ID=cds-OFO30087.1;Parent=gene-HMPREF3052_02880;Dbxref=NCBI_GP:OFO30087.1;Name=OFO30087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341688.1;locus_tag=HMPREF3052_02880;product=50S ribosomal protein L21;protein_id=OFO30087.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 23673 24647 . + . ID=gene-HMPREF3052_02885;Name=HMPREF3052_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02885 GCA_001815685.1|KV821600.1 Protein Homology CDS 23673 24647 . + 0 ID=cds-OFO30088.1;Parent=gene-HMPREF3052_02885;Dbxref=NCBI_GP:OFO30088.1;Name=OFO30088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750327.1;locus_tag=HMPREF3052_02885;product=octaprenyl diphosphate synthase;protein_id=OFO30088.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 24652 25098 . + . ID=gene-HMPREF3052_02890;Name=HMPREF3052_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02890 GCA_001815685.1|KV821600.1 Protein Homology CDS 24652 25098 . + 0 ID=cds-OFO30089.1;Parent=gene-HMPREF3052_02890;Dbxref=NCBI_GP:OFO30089.1;Name=OFO30089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680097.1;locus_tag=HMPREF3052_02890;product=hypothetical protein;protein_id=OFO30089.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 25117 25191 . + . ID=gene-HMPREF3052_02895;Name=HMPREF3052_02895;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02895 GCA_001815685.1|KV821600.1 tRNAscan-SE tRNA 25117 25191 . + . ID=rna-HMPREF3052_02895;Parent=gene-HMPREF3052_02895;anticodon=(pos:25150..25152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02895;product=tRNA-Arg GCA_001815685.1|KV821600.1 tRNAscan-SE exon 25117 25191 . + . ID=exon-HMPREF3052_02895-1;Parent=rna-HMPREF3052_02895;anticodon=(pos:25150..25152);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02895;product=tRNA-Arg GCA_001815685.1|KV821600.1 Genbank gene 25294 26451 . - . ID=gene-HMPREF3052_02900;Name=HMPREF3052_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02900 GCA_001815685.1|KV821600.1 Protein Homology CDS 25294 26451 . - 0 ID=cds-OFO30090.1;Parent=gene-HMPREF3052_02900;Dbxref=NCBI_GP:OFO30090.1;Name=OFO30090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711121.1;locus_tag=HMPREF3052_02900;product=NnrS protein;protein_id=OFO30090.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 26538 26918 . - . ID=gene-HMPREF3052_02905;Name=HMPREF3052_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02905 GCA_001815685.1|KV821600.1 Protein Homology CDS 26538 26918 . - 0 ID=cds-OFO30091.1;Parent=gene-HMPREF3052_02905;Dbxref=NCBI_GP:OFO30091.1;Name=OFO30091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686762.1;locus_tag=HMPREF3052_02905;product=hypothetical protein;protein_id=OFO30091.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 27065 27523 . + . ID=gene-HMPREF3052_02910;Name=HMPREF3052_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02910 GCA_001815685.1|KV821600.1 Protein Homology CDS 27065 27523 . + 0 ID=cds-OFO30092.1;Parent=gene-HMPREF3052_02910;Dbxref=NCBI_GP:OFO30092.1;Name=OFO30092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748415.1;locus_tag=HMPREF3052_02910;product=Rrf2 family transcriptional regulator;protein_id=OFO30092.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 27676 27969 . - . ID=gene-HMPREF3052_02915;Name=HMPREF3052_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02915 GCA_001815685.1|KV821600.1 GeneMarkS+ CDS 27676 27969 . - 0 ID=cds-OFO30093.1;Parent=gene-HMPREF3052_02915;Dbxref=NCBI_GP:OFO30093.1;Name=OFO30093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_02915;product=hypothetical protein;protein_id=OFO30093.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 28123 28198 . - . ID=gene-HMPREF3052_02920;Name=HMPREF3052_02920;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_02920 GCA_001815685.1|KV821600.1 tRNAscan-SE tRNA 28123 28198 . - . ID=rna-HMPREF3052_02920;Parent=gene-HMPREF3052_02920;anticodon=(pos:complement(28163..28165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02920;product=tRNA-Met GCA_001815685.1|KV821600.1 tRNAscan-SE exon 28123 28198 . - . ID=exon-HMPREF3052_02920-1;Parent=rna-HMPREF3052_02920;anticodon=(pos:complement(28163..28165));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_02920;product=tRNA-Met GCA_001815685.1|KV821600.1 Genbank gene 28292 29146 . - . ID=gene-HMPREF3052_02925;Name=HMPREF3052_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02925 GCA_001815685.1|KV821600.1 Protein Homology CDS 28292 29146 . - 0 ID=cds-OFO30094.1;Parent=gene-HMPREF3052_02925;Dbxref=NCBI_GP:OFO30094.1;Name=OFO30094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680102.1;locus_tag=HMPREF3052_02925;product=dihydropteroate synthase;protein_id=OFO30094.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 29231 30892 . - . ID=gene-HMPREF3052_02930;Name=HMPREF3052_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02930 GCA_001815685.1|KV821600.1 Protein Homology CDS 29231 30892 . - 0 ID=cds-OFO30095.1;Parent=gene-HMPREF3052_02930;Dbxref=NCBI_GP:OFO30095.1;Name=OFO30095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002236772.1;locus_tag=HMPREF3052_02930;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=OFO30095.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 31026 31463 . - . ID=gene-HMPREF3052_02935;Name=HMPREF3052_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02935 GCA_001815685.1|KV821600.1 Protein Homology CDS 31026 31463 . - 0 ID=cds-OFO30096.1;Parent=gene-HMPREF3052_02935;Dbxref=NCBI_GP:OFO30096.1;Name=OFO30096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216614.1;locus_tag=HMPREF3052_02935;product=biopolymer transporter ExbD;protein_id=OFO30096.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 31467 32126 . - . ID=gene-HMPREF3052_02940;Name=HMPREF3052_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02940 GCA_001815685.1|KV821600.1 Protein Homology CDS 31467 32126 . - 0 ID=cds-OFO30097.1;Parent=gene-HMPREF3052_02940;Dbxref=NCBI_GP:OFO30097.1;Name=OFO30097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680108.1;locus_tag=HMPREF3052_02940;product=biopolymer transporter ExbB;protein_id=OFO30097.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 32229 33164 . - . ID=gene-HMPREF3052_02945;Name=HMPREF3052_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02945 GCA_001815685.1|KV821600.1 Protein Homology CDS 32229 33164 . - 0 ID=cds-OFO30098.1;Parent=gene-HMPREF3052_02945;Dbxref=NCBI_GP:OFO30098.1;Name=OFO30098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686833.1;locus_tag=HMPREF3052_02945;product=energy transducer TonB;protein_id=OFO30098.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 33516 34412 . - . ID=gene-HMPREF3052_02950;Name=HMPREF3052_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02950 GCA_001815685.1|KV821600.1 Protein Homology CDS 33516 34412 . - 0 ID=cds-OFO30099.1;Parent=gene-HMPREF3052_02950;Dbxref=NCBI_GP:OFO30099.1;Name=OFO30099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518817.1;locus_tag=HMPREF3052_02950;product=recombinase XerC;protein_id=OFO30099.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 34414 34842 . - . ID=gene-HMPREF3052_02955;Name=HMPREF3052_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02955 GCA_001815685.1|KV821600.1 Protein Homology CDS 34414 34842 . - 0 ID=cds-OFO30100.1;Parent=gene-HMPREF3052_02955;Dbxref=NCBI_GP:OFO30100.1;Name=OFO30100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518818.1;locus_tag=HMPREF3052_02955;product=esterase;protein_id=OFO30100.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 34993 36057 . + . ID=gene-HMPREF3052_02960;Name=HMPREF3052_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02960 GCA_001815685.1|KV821600.1 Protein Homology CDS 34993 36057 . + 0 ID=cds-OFO30101.1;Parent=gene-HMPREF3052_02960;Dbxref=NCBI_GP:OFO30101.1;Name=OFO30101.1;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219833.1;locus_tag=HMPREF3052_02960;product=fructose-1%2C6-bisphosphate aldolase;protein_id=OFO30101.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank pseudogene 36186 37115 . + . ID=gene-HMPREF3052_02965;Name=HMPREF3052_02965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_02965;pseudo=true GCA_001815685.1|KV821600.1 Protein Homology CDS 36186 37115 . + 0 ID=cds-HMPREF3052_02965;Parent=gene-HMPREF3052_02965;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748400.1;locus_tag=HMPREF3052_02965;product=glycosyl transferase family 2;pseudo=true;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 37181 38857 . - . ID=gene-HMPREF3052_02970;Name=HMPREF3052_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02970 GCA_001815685.1|KV821600.1 Protein Homology CDS 37181 38857 . - 0 ID=cds-OFO30102.1;Parent=gene-HMPREF3052_02970;Dbxref=NCBI_GP:OFO30102.1;Name=OFO30102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742723.1;locus_tag=HMPREF3052_02970;product=formate--tetrahydrofolate ligase;protein_id=OFO30102.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 39037 39468 . + . ID=gene-HMPREF3052_02975;Name=HMPREF3052_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02975 GCA_001815685.1|KV821600.1 Protein Homology CDS 39037 39468 . + 0 ID=cds-OFO30103.1;Parent=gene-HMPREF3052_02975;Dbxref=NCBI_GP:OFO30103.1;Name=OFO30103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258698.1;locus_tag=HMPREF3052_02975;product=hypothetical protein;protein_id=OFO30103.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 39539 40681 . - . ID=gene-HMPREF3052_02980;Name=HMPREF3052_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02980 GCA_001815685.1|KV821600.1 Protein Homology CDS 39539 40681 . - 0 ID=cds-OFO30104.1;Parent=gene-HMPREF3052_02980;Dbxref=NCBI_GP:OFO30104.1;Name=OFO30104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686757.1;locus_tag=HMPREF3052_02980;product=polyamine ABC transporter substrate-binding protein;protein_id=OFO30104.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 40990 41253 . + . ID=gene-HMPREF3052_02985;Name=HMPREF3052_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02985 GCA_001815685.1|KV821600.1 Protein Homology CDS 40990 41253 . + 0 ID=cds-OFO30105.1;Parent=gene-HMPREF3052_02985;Dbxref=NCBI_GP:OFO30105.1;Name=OFO30105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116575.1;locus_tag=HMPREF3052_02985;product=30S ribosomal protein S20;protein_id=OFO30105.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 41422 42561 . + . ID=gene-HMPREF3052_02990;Name=HMPREF3052_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02990 GCA_001815685.1|KV821600.1 Protein Homology CDS 41422 42561 . + 0 ID=cds-OFO30106.1;Parent=gene-HMPREF3052_02990;Dbxref=NCBI_GP:OFO30106.1;Name=OFO30106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518824.1;locus_tag=HMPREF3052_02990;product=phospholipase;protein_id=OFO30106.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 42713 43414 . + . ID=gene-HMPREF3052_02995;Name=HMPREF3052_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_02995 GCA_001815685.1|KV821600.1 Protein Homology CDS 42713 43414 . + 0 ID=cds-OFO30107.1;Parent=gene-HMPREF3052_02995;Dbxref=NCBI_GP:OFO30107.1;Name=OFO30107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686836.1;locus_tag=HMPREF3052_02995;product=hypothetical protein;protein_id=OFO30107.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 43479 45287 . + . ID=gene-HMPREF3052_03000;Name=HMPREF3052_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03000 GCA_001815685.1|KV821600.1 Protein Homology CDS 43479 45287 . + 0 ID=cds-OFO30108.1;Parent=gene-HMPREF3052_03000;Dbxref=NCBI_GP:OFO30108.1;Name=OFO30108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269822.1;locus_tag=HMPREF3052_03000;product=aspartate--tRNA ligase;protein_id=OFO30108.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 45527 46912 . + . ID=gene-HMPREF3052_03005;Name=HMPREF3052_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03005 GCA_001815685.1|KV821600.1 Protein Homology CDS 45527 46912 . + 0 ID=cds-OFO30109.1;Parent=gene-HMPREF3052_03005;Dbxref=NCBI_GP:OFO30109.1;Name=OFO30109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686773.1;locus_tag=HMPREF3052_03005;product=N-acetylglucosaminylphosphatidylinositol deacetylase;protein_id=OFO30109.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 47194 47901 . + . ID=gene-HMPREF3052_03010;Name=HMPREF3052_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03010 GCA_001815685.1|KV821600.1 Protein Homology CDS 47194 47901 . + 0 ID=cds-OFO29929.1;Parent=gene-HMPREF3052_03010;Dbxref=NCBI_GP:OFO29929.1;Name=OFO29929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748384.1;locus_tag=HMPREF3052_03010;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=OFO29929.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 47973 48803 . - . ID=gene-HMPREF3052_03015;Name=HMPREF3052_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03015 GCA_001815685.1|KV821600.1 Protein Homology CDS 47973 48803 . - 0 ID=cds-OFO29960.1;Parent=gene-HMPREF3052_03015;Dbxref=NCBI_GP:OFO29960.1;Name=OFO29960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748382.1;locus_tag=HMPREF3052_03015;product=phosphoserine phosphatase SerB;protein_id=OFO29960.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 49354 51561 . + . ID=gene-HMPREF3052_03020;Name=HMPREF3052_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03020 GCA_001815685.1|KV821600.1 Protein Homology CDS 49354 51561 . + 0 ID=cds-OFO29930.1;Parent=gene-HMPREF3052_03020;Dbxref=NCBI_GP:OFO29930.1;Name=OFO29930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748378.1;locus_tag=HMPREF3052_03020;product=ferripyoverdine receptor;protein_id=OFO29930.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 51753 53972 . + . ID=gene-HMPREF3052_03025;Name=HMPREF3052_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03025 GCA_001815685.1|KV821600.1 Protein Homology CDS 51753 53972 . + 0 ID=cds-OFO29931.1;Parent=gene-HMPREF3052_03025;Dbxref=NCBI_GP:OFO29931.1;Name=OFO29931.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686815.1;locus_tag=HMPREF3052_03025;product=ferripyoverdine receptor;protein_id=OFO29931.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 54210 55922 . + . ID=gene-HMPREF3052_03030;Name=HMPREF3052_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03030 GCA_001815685.1|KV821600.1 Protein Homology CDS 54210 55922 . + 0 ID=cds-OFO29932.1;Parent=gene-HMPREF3052_03030;Dbxref=NCBI_GP:OFO29932.1;Name=OFO29932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748376.1;locus_tag=HMPREF3052_03030;product=ABC transporter ATP-binding protein;protein_id=OFO29932.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 56354 57400 . + . ID=gene-HMPREF3052_03035;Name=HMPREF3052_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03035 GCA_001815685.1|KV821600.1 Protein Homology CDS 56354 57400 . + 0 ID=cds-OFO29933.1;Parent=gene-HMPREF3052_03035;Dbxref=NCBI_GP:OFO29933.1;Name=OFO29933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242977.1;locus_tag=HMPREF3052_03035;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=OFO29933.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 57477 57752 . - . ID=gene-HMPREF3052_03040;Name=HMPREF3052_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03040 GCA_001815685.1|KV821600.1 Protein Homology CDS 57477 57752 . - 0 ID=cds-OFO29934.1;Parent=gene-HMPREF3052_03040;Dbxref=NCBI_GP:OFO29934.1;Name=OFO29934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748371.1;locus_tag=HMPREF3052_03040;product=hypothetical protein;protein_id=OFO29934.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 58014 58700 . + . ID=gene-HMPREF3052_03045;Name=HMPREF3052_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03045 GCA_001815685.1|KV821600.1 Protein Homology CDS 58014 58700 . + 0 ID=cds-OFO29935.1;Parent=gene-HMPREF3052_03045;Dbxref=NCBI_GP:OFO29935.1;Name=OFO29935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680158.1;locus_tag=HMPREF3052_03045;product=repressor;protein_id=OFO29935.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 58833 59171 . + . ID=gene-HMPREF3052_03050;Name=HMPREF3052_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03050 GCA_001815685.1|KV821600.1 Protein Homology CDS 58833 59171 . + 0 ID=cds-OFO29936.1;Parent=gene-HMPREF3052_03050;Dbxref=NCBI_GP:OFO29936.1;Name=OFO29936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233615.1;locus_tag=HMPREF3052_03050;product=iron-sulfur cluster insertion protein ErpA;protein_id=OFO29936.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 59505 60179 . + . ID=gene-HMPREF3052_03055;Name=HMPREF3052_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03055 GCA_001815685.1|KV821600.1 Protein Homology CDS 59505 60179 . + 0 ID=cds-OFO29937.1;Parent=gene-HMPREF3052_03055;Dbxref=NCBI_GP:OFO29937.1;Name=OFO29937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518836.1;locus_tag=HMPREF3052_03055;product=hypothetical protein;protein_id=OFO29937.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 60260 62428 . - . ID=gene-HMPREF3052_03060;Name=HMPREF3052_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03060 GCA_001815685.1|KV821600.1 Protein Homology CDS 60260 62428 . - 0 ID=cds-OFO29938.1;Parent=gene-HMPREF3052_03060;Dbxref=NCBI_GP:OFO29938.1;Name=OFO29938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231861.1;locus_tag=HMPREF3052_03060;product=primosomal protein N';protein_id=OFO29938.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 62564 63355 . + . ID=gene-HMPREF3052_03065;Name=HMPREF3052_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03065 GCA_001815685.1|KV821600.1 Protein Homology CDS 62564 63355 . + 0 ID=cds-OFO29939.1;Parent=gene-HMPREF3052_03065;Dbxref=NCBI_GP:OFO29939.1;Name=OFO29939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518838.1;locus_tag=HMPREF3052_03065;product=thiol:disulfide interchange protein;protein_id=OFO29939.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 63491 64174 . - . ID=gene-HMPREF3052_03070;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=HMPREF3052_03070 GCA_001815685.1|KV821600.1 Protein Homology CDS 63491 64174 . - 0 ID=cds-OFO29940.1;Parent=gene-HMPREF3052_03070;Dbxref=NCBI_GP:OFO29940.1;Name=OFO29940.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270886.1;locus_tag=HMPREF3052_03070;product=phosphoglyceromutase;protein_id=OFO29940.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 64277 65029 . - . ID=gene-HMPREF3052_03075;Name=HMPREF3052_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03075 GCA_001815685.1|KV821600.1 Protein Homology CDS 64277 65029 . - 0 ID=cds-OFO29941.1;Parent=gene-HMPREF3052_03075;Dbxref=NCBI_GP:OFO29941.1;Name=OFO29941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686831.1;locus_tag=HMPREF3052_03075;product=16S rRNA methyltransferase;protein_id=OFO29941.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 65078 66706 . - . ID=gene-HMPREF3052_03080;Name=HMPREF3052_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03080 GCA_001815685.1|KV821600.1 Protein Homology CDS 65078 66706 . - 0 ID=cds-OFO29942.1;Parent=gene-HMPREF3052_03080;Dbxref=NCBI_GP:OFO29942.1;Name=OFO29942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743698.1;locus_tag=HMPREF3052_03080;product=transcriptional regulator;protein_id=OFO29942.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 66699 68285 . - . ID=gene-HMPREF3052_03085;Name=HMPREF3052_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03085 GCA_001815685.1|KV821600.1 Protein Homology CDS 66699 68285 . - 0 ID=cds-OFO29943.1;Parent=gene-HMPREF3052_03085;Dbxref=NCBI_GP:OFO29943.1;Name=OFO29943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518842.1;locus_tag=HMPREF3052_03085;product=histidine kinase;protein_id=OFO29943.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 68355 70658 . - . ID=gene-HMPREF3052_03090;Name=HMPREF3052_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03090 GCA_001815685.1|KV821600.1 Protein Homology CDS 68355 70658 . - 0 ID=cds-OFO29944.1;Parent=gene-HMPREF3052_03090;Dbxref=NCBI_GP:OFO29944.1;Name=OFO29944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748354.1;locus_tag=HMPREF3052_03090;product=DNA topoisomerase IV subunit A;protein_id=OFO29944.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank pseudogene 70867 72190 . - . ID=gene-HMPREF3052_03095;Name=HMPREF3052_03095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03095;pseudo=true GCA_001815685.1|KV821600.1 Protein Homology CDS 70867 72190 . - 0 ID=cds-HMPREF3052_03095;Parent=gene-HMPREF3052_03095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748352.1;locus_tag=HMPREF3052_03095;product=sugar transporter;pseudo=true;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 72388 73431 . - . ID=gene-HMPREF3052_03100;Name=HMPREF3052_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03100 GCA_001815685.1|KV821600.1 Protein Homology CDS 72388 73431 . - 0 ID=cds-OFO29945.1;Parent=gene-HMPREF3052_03100;Dbxref=NCBI_GP:OFO29945.1;Name=OFO29945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686780.1;locus_tag=HMPREF3052_03100;product=LacI family transcriptional regulator;protein_id=OFO29945.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 73683 75323 . + . ID=gene-HMPREF3052_03105;Name=HMPREF3052_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03105 GCA_001815685.1|KV821600.1 Protein Homology CDS 73683 75323 . + 0 ID=cds-OFO29946.1;Parent=gene-HMPREF3052_03105;Dbxref=NCBI_GP:OFO29946.1;Name=OFO29946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518847.1;locus_tag=HMPREF3052_03105;product=glucose-6-phosphate isomerase;protein_id=OFO29946.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 75495 75992 . - . ID=gene-HMPREF3052_03110;Name=HMPREF3052_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03110 GCA_001815685.1|KV821600.1 Protein Homology CDS 75495 75992 . - 0 ID=cds-OFO29947.1;Parent=gene-HMPREF3052_03110;Dbxref=NCBI_GP:OFO29947.1;Name=OFO29947.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005566292.1;locus_tag=HMPREF3052_03110;product=ferritin;protein_id=OFO29947.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 76009 76494 . - . ID=gene-HMPREF3052_03115;Name=HMPREF3052_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03115 GCA_001815685.1|KV821600.1 Protein Homology CDS 76009 76494 . - 0 ID=cds-OFO29948.1;Parent=gene-HMPREF3052_03115;Dbxref=NCBI_GP:OFO29948.1;Name=OFO29948.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43707.2;locus_tag=HMPREF3052_03115;product=ferritin;protein_id=OFO29948.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 77027 77236 . + . ID=gene-HMPREF3052_03120;Name=HMPREF3052_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03120 GCA_001815685.1|KV821600.1 Protein Homology CDS 77027 77236 . + 0 ID=cds-OFO29949.1;Parent=gene-HMPREF3052_03120;Dbxref=NCBI_GP:OFO29949.1;Name=OFO29949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582233.1;locus_tag=HMPREF3052_03120;product=protoheme IX farnesyltransferase;protein_id=OFO29949.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank pseudogene 77220 77477 . + . ID=gene-HMPREF3052_03125;Name=HMPREF3052_03125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03125;pseudo=true GCA_001815685.1|KV821600.1 Protein Homology CDS 77220 77477 . + 0 ID=cds-HMPREF3052_03125;Parent=gene-HMPREF3052_03125;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574196.1;locus_tag=HMPREF3052_03125;product=bacteriocin transporter;pseudo=true;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 77888 79114 . + . ID=gene-HMPREF3052_03130;Name=HMPREF3052_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03130 GCA_001815685.1|KV821600.1 Protein Homology CDS 77888 79114 . + 0 ID=cds-OFO29961.1;Parent=gene-HMPREF3052_03130;Dbxref=NCBI_GP:OFO29961.1;Name=OFO29961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518848.1;locus_tag=HMPREF3052_03130;product=AmpG family muropeptide MFS transporter;protein_id=OFO29961.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 79188 79502 . - . ID=gene-HMPREF3052_03135;Name=HMPREF3052_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03135 GCA_001815685.1|KV821600.1 Protein Homology CDS 79188 79502 . - 0 ID=cds-OFO29950.1;Parent=gene-HMPREF3052_03135;Dbxref=NCBI_GP:OFO29950.1;Name=OFO29950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686594.1;locus_tag=HMPREF3052_03135;product=RNA polymerase subunit sigma-54;protein_id=OFO29950.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 79552 80907 . - . ID=gene-HMPREF3052_03140;Name=HMPREF3052_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03140 GCA_001815685.1|KV821600.1 Protein Homology CDS 79552 80907 . - 0 ID=cds-OFO29951.1;Parent=gene-HMPREF3052_03140;Dbxref=NCBI_GP:OFO29951.1;Name=OFO29951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748341.1;locus_tag=HMPREF3052_03140;product=RNA polymerase sigma-54 factor;protein_id=OFO29951.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 81090 81824 . - . ID=gene-HMPREF3052_03145;Name=HMPREF3052_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03145 GCA_001815685.1|KV821600.1 Protein Homology CDS 81090 81824 . - 0 ID=cds-OFO29952.1;Parent=gene-HMPREF3052_03145;Dbxref=NCBI_GP:OFO29952.1;Name=OFO29952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757055.1;locus_tag=HMPREF3052_03145;product=ABC transporter ATP-binding protein;protein_id=OFO29952.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 81895 82425 . - . ID=gene-HMPREF3052_03150;Name=HMPREF3052_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03150 GCA_001815685.1|KV821600.1 Protein Homology CDS 81895 82425 . - 0 ID=cds-OFO29953.1;Parent=gene-HMPREF3052_03150;Dbxref=NCBI_GP:OFO29953.1;Name=OFO29953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212427.1;locus_tag=HMPREF3052_03150;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=OFO29953.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 82406 82987 . - . ID=gene-HMPREF3052_03155;Name=HMPREF3052_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03155 GCA_001815685.1|KV821600.1 Protein Homology CDS 82406 82987 . - 0 ID=cds-OFO29954.1;Parent=gene-HMPREF3052_03155;Dbxref=NCBI_GP:OFO29954.1;Name=OFO29954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748335.1;locus_tag=HMPREF3052_03155;product=LPS export ABC transporter periplasmic protein LptC;protein_id=OFO29954.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 82984 83520 . - . ID=gene-HMPREF3052_03160;Name=HMPREF3052_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03160 GCA_001815685.1|KV821600.1 Protein Homology CDS 82984 83520 . - 0 ID=cds-OFO29955.1;Parent=gene-HMPREF3052_03160;Dbxref=NCBI_GP:OFO29955.1;Name=OFO29955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581333.1;locus_tag=HMPREF3052_03160;product=phenylphosphate carboxylase subunit delta;protein_id=OFO29955.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 83587 84561 . - . ID=gene-HMPREF3052_03165;Name=HMPREF3052_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03165 GCA_001815685.1|KV821600.1 Protein Homology CDS 83587 84561 . - 0 ID=cds-OFO29956.1;Parent=gene-HMPREF3052_03165;Dbxref=NCBI_GP:OFO29956.1;Name=OFO29956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245862.1;locus_tag=HMPREF3052_03165;product=D-arabinose 5-phosphate isomerase;protein_id=OFO29956.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 84696 85751 . + . ID=gene-HMPREF3052_03170;Name=HMPREF3052_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03170 GCA_001815685.1|KV821600.1 Protein Homology CDS 84696 85751 . + 0 ID=cds-OFO29957.1;Parent=gene-HMPREF3052_03170;Dbxref=NCBI_GP:OFO29957.1;Name=OFO29957.1;Note=catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RJ66.1;locus_tag=HMPREF3052_03170;product=transaldolase;protein_id=OFO29957.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 85998 86357 . + . ID=gene-HMPREF3052_03175;Name=HMPREF3052_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03175 GCA_001815685.1|KV821600.1 Protein Homology CDS 85998 86357 . + 0 ID=cds-OFO29962.1;Parent=gene-HMPREF3052_03175;Dbxref=NCBI_GP:OFO29962.1;Name=OFO29962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237611.1;locus_tag=HMPREF3052_03175;product=hypothetical protein;protein_id=OFO29962.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank pseudogene 86338 86628 . + . ID=gene-HMPREF3052_03180;Name=HMPREF3052_03180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03180;pseudo=true GCA_001815685.1|KV821600.1 Protein Homology CDS 86338 86628 . + 0 ID=cds-HMPREF3052_03180;Parent=gene-HMPREF3052_03180;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003689553.1;locus_tag=HMPREF3052_03180;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 86645 87532 . + . ID=gene-HMPREF3052_03185;Name=HMPREF3052_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03185 GCA_001815685.1|KV821600.1 Protein Homology CDS 86645 87532 . + 0 ID=cds-OFO29958.1;Parent=gene-HMPREF3052_03185;Dbxref=NCBI_GP:OFO29958.1;Name=OFO29958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776008.1;locus_tag=HMPREF3052_03185;product=tRNA glutamyl-Q synthetase;protein_id=OFO29958.1;transl_table=11 GCA_001815685.1|KV821600.1 Genbank gene 87772 88506 . + . ID=gene-HMPREF3052_03190;Name=HMPREF3052_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03190 GCA_001815685.1|KV821600.1 Protein Homology CDS 87772 88506 . + 0 ID=cds-OFO29959.1;Parent=gene-HMPREF3052_03190;Dbxref=NCBI_GP:OFO29959.1;Name=OFO29959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748328.1;locus_tag=HMPREF3052_03190;product=DNA-binding response regulator;protein_id=OFO29959.1;transl_table=11 ##sequence-region KV821601.1 1 4313 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821601.1 Genbank region 1 4313 . + . ID=KV821601.1:1..4313;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821601.1 Genbank gene 172 2205 . + . ID=gene-HMPREF3052_03195;Name=HMPREF3052_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03195 GCA_001815685.1|KV821601.1 Protein Homology CDS 172 2205 . + 0 ID=cds-OFO29823.1;Parent=gene-HMPREF3052_03195;Dbxref=NCBI_GP:OFO29823.1;Name=OFO29823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684651.1;locus_tag=HMPREF3052_03195;product=excinuclease ABC subunit B;protein_id=OFO29823.1;transl_table=11 GCA_001815685.1|KV821601.1 Genbank gene 2241 3515 . + . ID=gene-HMPREF3052_03200;Name=HMPREF3052_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03200 GCA_001815685.1|KV821601.1 Protein Homology CDS 2241 3515 . + 0 ID=cds-OFO29824.1;Parent=gene-HMPREF3052_03200;Dbxref=NCBI_GP:OFO29824.1;Name=OFO29824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002735128.1;locus_tag=HMPREF3052_03200;product=ATPase;protein_id=OFO29824.1;transl_table=11 GCA_001815685.1|KV821601.1 Genbank gene 3530 4165 . + . ID=gene-HMPREF3052_03205;Name=HMPREF3052_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03205 GCA_001815685.1|KV821601.1 Protein Homology CDS 3530 4165 . + 0 ID=cds-OFO29825.1;Parent=gene-HMPREF3052_03205;Dbxref=NCBI_GP:OFO29825.1;Name=OFO29825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005370368.1;locus_tag=HMPREF3052_03205;product=hypothetical protein;protein_id=OFO29825.1;transl_table=11 ##sequence-region KV821602.1 1 15669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821602.1 Genbank region 1 15669 . + . ID=KV821602.1:1..15669;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821602.1 Genbank gene 37 112 . + . ID=gene-HMPREF3052_03210;Name=HMPREF3052_03210;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_03210 GCA_001815685.1|KV821602.1 tRNAscan-SE tRNA 37 112 . + . ID=rna-HMPREF3052_03210;Parent=gene-HMPREF3052_03210;anticodon=(pos:70..72);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_03210;product=tRNA-Trp GCA_001815685.1|KV821602.1 tRNAscan-SE exon 37 112 . + . ID=exon-HMPREF3052_03210-1;Parent=rna-HMPREF3052_03210;anticodon=(pos:70..72);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_03210;product=tRNA-Trp GCA_001815685.1|KV821602.1 Genbank gene 244 519 . + . ID=gene-HMPREF3052_03215;Name=HMPREF3052_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03215 GCA_001815685.1|KV821602.1 Protein Homology CDS 244 519 . + 0 ID=cds-OFO29789.1;Parent=gene-HMPREF3052_03215;Dbxref=NCBI_GP:OFO29789.1;Name=OFO29789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521090.1;locus_tag=HMPREF3052_03215;product=preprotein translocase subunit SecE;protein_id=OFO29789.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 522 1055 . + . ID=gene-HMPREF3052_03220;Name=HMPREF3052_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03220 GCA_001815685.1|KV821602.1 Protein Homology CDS 522 1055 . + 0 ID=cds-OFO29790.1;Parent=gene-HMPREF3052_03220;Dbxref=NCBI_GP:OFO29790.1;Name=OFO29790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760509.1;locus_tag=HMPREF3052_03220;product=transcription termination/antitermination protein NusG;protein_id=OFO29790.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 1160 1594 . + . ID=gene-HMPREF3052_03225;Name=HMPREF3052_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03225 GCA_001815685.1|KV821602.1 Protein Homology CDS 1160 1594 . + 0 ID=cds-OFO29791.1;Parent=gene-HMPREF3052_03225;Dbxref=NCBI_GP:OFO29791.1;Name=OFO29791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218414.1;locus_tag=HMPREF3052_03225;product=50S ribosomal protein L11;protein_id=OFO29791.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 1594 2289 . + . ID=gene-HMPREF3052_03230;Name=HMPREF3052_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03230 GCA_001815685.1|KV821602.1 Protein Homology CDS 1594 2289 . + 0 ID=cds-OFO29792.1;Parent=gene-HMPREF3052_03230;Dbxref=NCBI_GP:OFO29792.1;Name=OFO29792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270605.1;locus_tag=HMPREF3052_03230;product=50S ribosomal protein L1;protein_id=OFO29792.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 2513 3013 . + . ID=gene-HMPREF3052_03235;Name=HMPREF3052_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03235 GCA_001815685.1|KV821602.1 Protein Homology CDS 2513 3013 . + 0 ID=cds-OFO29793.1;Parent=gene-HMPREF3052_03235;Dbxref=NCBI_GP:OFO29793.1;Name=OFO29793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690107.1;locus_tag=HMPREF3052_03235;product=50S ribosomal protein L10;protein_id=OFO29793.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 3071 3442 . + . ID=gene-HMPREF3052_03240;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF3052_03240 GCA_001815685.1|KV821602.1 Protein Homology CDS 3071 3442 . + 0 ID=cds-OFO29794.1;Parent=gene-HMPREF3052_03240;Dbxref=NCBI_GP:OFO29794.1;Name=OFO29794.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749262.1;locus_tag=HMPREF3052_03240;product=50S ribosomal protein L7/L12;protein_id=OFO29794.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 3632 7810 . + . ID=gene-HMPREF3052_03245;Name=HMPREF3052_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03245 GCA_001815685.1|KV821602.1 Protein Homology CDS 3632 7810 . + 0 ID=cds-OFO29795.1;Parent=gene-HMPREF3052_03245;Dbxref=NCBI_GP:OFO29795.1;Name=OFO29795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235366.1;locus_tag=HMPREF3052_03245;product=DNA-directed RNA polymerase subunit beta;protein_id=OFO29795.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 7967 12142 . + . ID=gene-HMPREF3052_03250;Name=HMPREF3052_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03250 GCA_001815685.1|KV821602.1 Protein Homology CDS 7967 12142 . + 0 ID=cds-OFO29796.1;Parent=gene-HMPREF3052_03250;Dbxref=NCBI_GP:OFO29796.1;Name=OFO29796.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215378.1;locus_tag=HMPREF3052_03250;product=DNA-directed RNA polymerase subunit beta';protein_id=OFO29796.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 12472 12843 . + . ID=gene-HMPREF3052_03255;Name=HMPREF3052_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03255 GCA_001815685.1|KV821602.1 Protein Homology CDS 12472 12843 . + 0 ID=cds-OFO29797.1;Parent=gene-HMPREF3052_03255;Dbxref=NCBI_GP:OFO29797.1;Name=OFO29797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5S1.1;locus_tag=HMPREF3052_03255;product=30S ribosomal protein S12;protein_id=OFO29797.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 12961 13431 . + . ID=gene-HMPREF3052_03260;Name=HMPREF3052_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03260 GCA_001815685.1|KV821602.1 Protein Homology CDS 12961 13431 . + 0 ID=cds-OFO29798.1;Parent=gene-HMPREF3052_03260;Dbxref=NCBI_GP:OFO29798.1;Name=OFO29798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=HMPREF3052_03260;product=30S ribosomal protein S7;protein_id=OFO29798.1;transl_table=11 GCA_001815685.1|KV821602.1 Genbank gene 13450 15555 . + . ID=gene-HMPREF3052_03265;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF3052_03265 GCA_001815685.1|KV821602.1 Protein Homology CDS 13450 15555 . + 0 ID=cds-OFO29799.1;Parent=gene-HMPREF3052_03265;Dbxref=NCBI_GP:OFO29799.1;Name=OFO29799.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273262.1;locus_tag=HMPREF3052_03265;product=elongation factor G;protein_id=OFO29799.1;transl_table=11 ##sequence-region KV821603.1 1 734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821603.1 Genbank region 1 734 . + . ID=KV821603.1:1..734;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821603.1 Genbank pseudogene 1 291 . - . ID=gene-HMPREF3052_03270;Name=HMPREF3052_03270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03270;pseudo=true GCA_001815685.1|KV821603.1 Protein Homology CDS 1 291 . - 0 ID=cds-HMPREF3052_03270;Parent=gene-HMPREF3052_03270;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686372.1;locus_tag=HMPREF3052_03270;product=chromophore lyase;pseudo=true;transl_table=11 GCA_001815685.1|KV821603.1 Genbank gene 424 660 . + . ID=gene-HMPREF3052_03275;Name=HMPREF3052_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03275 GCA_001815685.1|KV821603.1 Protein Homology CDS 424 660 . + 0 ID=cds-OFO29780.1;Parent=gene-HMPREF3052_03275;Dbxref=NCBI_GP:OFO29780.1;Name=OFO29780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342121.1;locus_tag=HMPREF3052_03275;product=hypothetical protein;protein_id=OFO29780.1;transl_table=11 ##sequence-region KV821604.1 1 404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821604.1 Genbank region 1 404 . + . ID=KV821604.1:1..404;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821604.1 Genbank pseudogene 1 404 . - . ID=gene-HMPREF3052_03280;Name=HMPREF3052_03280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03280;pseudo=true GCA_001815685.1|KV821604.1 GeneMarkS+ CDS 1 404 . - 1 ID=cds-HMPREF3052_03280;Parent=gene-HMPREF3052_03280;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03280;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821605.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821605.1 Genbank region 1 337 . + . ID=KV821605.1:1..337;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821605.1 Genbank gene 1 325 . + . ID=gene-HMPREF3052_03285;Name=HMPREF3052_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03285;partial=true;start_range=.,1 GCA_001815685.1|KV821605.1 GeneMarkS+ CDS 1 325 . + 1 ID=cds-OFO29776.1;Parent=gene-HMPREF3052_03285;Dbxref=NCBI_GP:OFO29776.1;Name=OFO29776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03285;partial=true;product=hypothetical protein;protein_id=OFO29776.1;start_range=.,1;transl_table=11 ##sequence-region KV821606.1 1 19191 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821606.1 Genbank region 1 19191 . + . ID=KV821606.1:1..19191;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821606.1 Genbank pseudogene 2049 2229 . + . ID=gene-HMPREF3052_03290;Name=HMPREF3052_03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03290;pseudo=true GCA_001815685.1|KV821606.1 GeneMarkS+ CDS 2049 2229 . + 1 ID=cds-HMPREF3052_03290;Parent=gene-HMPREF3052_03290;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03290;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821606.1 Genbank direct_repeat 2370 2789 . + . ID=id-KV821606.1:2370..2789;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..25;rpt_unit_seq=gccttcgggcggctgtgtgttgaaa GCA_001815685.1|KV821606.1 Genbank gene 5415 5621 . + . ID=gene-HMPREF3052_03295;Name=HMPREF3052_03295;end_range=5621,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03295;partial=true GCA_001815685.1|KV821606.1 GeneMarkS+ CDS 5415 5621 . + 0 ID=cds-OFO29632.1;Parent=gene-HMPREF3052_03295;Dbxref=NCBI_GP:OFO29632.1;Name=OFO29632.1;end_range=5621,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03295;partial=true;product=hypothetical protein;protein_id=OFO29632.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 6257 7393 . + . ID=gene-HMPREF3052_03300;Name=HMPREF3052_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03300 GCA_001815685.1|KV821606.1 Protein Homology CDS 6257 7393 . + 0 ID=cds-OFO29617.1;Parent=gene-HMPREF3052_03300;Dbxref=NCBI_GP:OFO29617.1;Name=OFO29617.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054862.1;locus_tag=HMPREF3052_03300;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=OFO29617.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 7402 8229 . + . ID=gene-HMPREF3052_03305;Name=HMPREF3052_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03305 GCA_001815685.1|KV821606.1 Protein Homology CDS 7402 8229 . + 0 ID=cds-OFO29618.1;Parent=gene-HMPREF3052_03305;Dbxref=NCBI_GP:OFO29618.1;Name=OFO29618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961786.1;locus_tag=HMPREF3052_03305;product=S-formylglutathione hydrolase;protein_id=OFO29618.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 8417 10045 . - . ID=gene-HMPREF3052_03310;Name=HMPREF3052_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03310 GCA_001815685.1|KV821606.1 Protein Homology CDS 8417 10045 . - 0 ID=cds-OFO29619.1;Parent=gene-HMPREF3052_03310;Dbxref=NCBI_GP:OFO29619.1;Name=OFO29619.1;Note=sigma 54-dependent%3B regulates genes involved in forming a 2'%2C3'-cyclic phosphodiester on RNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685781.1;locus_tag=HMPREF3052_03310;product=transcriptional regulator;protein_id=OFO29619.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 11162 12736 . + . ID=gene-HMPREF3052_03315;Name=HMPREF3052_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03315 GCA_001815685.1|KV821606.1 Protein Homology CDS 11162 12736 . + 0 ID=cds-OFO29620.1;Parent=gene-HMPREF3052_03315;Dbxref=NCBI_GP:OFO29620.1;Name=OFO29620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778254.1;locus_tag=HMPREF3052_03315;product=RNA-binding protein;protein_id=OFO29620.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 12823 14301 . + . ID=gene-HMPREF3052_03320;Name=HMPREF3052_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03320 GCA_001815685.1|KV821606.1 Protein Homology CDS 12823 14301 . + 0 ID=cds-OFO29621.1;Parent=gene-HMPREF3052_03320;Dbxref=NCBI_GP:OFO29621.1;Name=OFO29621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678644.1;locus_tag=HMPREF3052_03320;product=2'-5' RNA ligase;protein_id=OFO29621.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 14395 14955 . + . ID=gene-HMPREF3052_03325;Name=HMPREF3052_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03325 GCA_001815685.1|KV821606.1 Protein Homology CDS 14395 14955 . + 0 ID=cds-OFO29622.1;Parent=gene-HMPREF3052_03325;Dbxref=NCBI_GP:OFO29622.1;Name=OFO29622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746257.1;locus_tag=HMPREF3052_03325;product=hypothetical protein;protein_id=OFO29622.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 15043 15486 . - . ID=gene-HMPREF3052_03330;Name=HMPREF3052_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03330 GCA_001815685.1|KV821606.1 Protein Homology CDS 15043 15486 . - 0 ID=cds-OFO29623.1;Parent=gene-HMPREF3052_03330;Dbxref=NCBI_GP:OFO29623.1;Name=OFO29623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271624.1;locus_tag=HMPREF3052_03330;product=ribose-5-phosphate isomerase;protein_id=OFO29623.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 15573 16226 . + . ID=gene-HMPREF3052_03335;Name=HMPREF3052_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03335 GCA_001815685.1|KV821606.1 Protein Homology CDS 15573 16226 . + 0 ID=cds-OFO29624.1;Parent=gene-HMPREF3052_03335;Dbxref=NCBI_GP:OFO29624.1;Name=OFO29624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520016.1;locus_tag=HMPREF3052_03335;product=phosphoesterase;protein_id=OFO29624.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 16364 16828 . + . ID=gene-HMPREF3052_03340;Name=HMPREF3052_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03340 GCA_001815685.1|KV821606.1 Protein Homology CDS 16364 16828 . + 0 ID=cds-OFO29625.1;Parent=gene-HMPREF3052_03340;Dbxref=NCBI_GP:OFO29625.1;Name=OFO29625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678636.1;locus_tag=HMPREF3052_03340;product=NUDIX pyrophosphatase;protein_id=OFO29625.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 16913 17446 . + . ID=gene-HMPREF3052_03345;Name=HMPREF3052_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03345 GCA_001815685.1|KV821606.1 Protein Homology CDS 16913 17446 . + 0 ID=cds-OFO29626.1;Parent=gene-HMPREF3052_03345;Dbxref=NCBI_GP:OFO29626.1;Name=OFO29626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVG3.1;locus_tag=HMPREF3052_03345;product=inorganic pyrophosphatase;protein_id=OFO29626.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 17604 17840 . + . ID=gene-HMPREF3052_03350;Name=HMPREF3052_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03350 GCA_001815685.1|KV821606.1 GeneMarkS+ CDS 17604 17840 . + 0 ID=cds-OFO29627.1;Parent=gene-HMPREF3052_03350;Dbxref=NCBI_GP:OFO29627.1;Name=OFO29627.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03350;product=hypothetical protein;protein_id=OFO29627.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 18104 18535 . + . ID=gene-HMPREF3052_03355;Name=HMPREF3052_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03355 GCA_001815685.1|KV821606.1 Protein Homology CDS 18104 18535 . + 0 ID=cds-OFO29628.1;Parent=gene-HMPREF3052_03355;Dbxref=NCBI_GP:OFO29628.1;Name=OFO29628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697050.1;locus_tag=HMPREF3052_03355;product=hypothetical protein;protein_id=OFO29628.1;transl_table=11 GCA_001815685.1|KV821606.1 Genbank gene 18555 19191 . + . ID=gene-HMPREF3052_03360;Name=HMPREF3052_03360;end_range=19191,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03360;partial=true GCA_001815685.1|KV821606.1 GeneMarkS+ CDS 18555 19191 . + 0 ID=cds-OFO29629.1;Parent=gene-HMPREF3052_03360;Dbxref=NCBI_GP:OFO29629.1;Name=OFO29629.1;end_range=19191,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03360;partial=true;product=hypothetical protein;protein_id=OFO29629.1;transl_table=11 ##sequence-region KV821607.1 1 61910 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821607.1 Genbank region 1 61910 . + . ID=KV821607.1:1..61910;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821607.1 Genbank gene 46 858 . - . ID=gene-HMPREF3052_03365;Name=HMPREF3052_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03365 GCA_001815685.1|KV821607.1 Protein Homology CDS 46 858 . - 0 ID=cds-OFO29546.1;Parent=gene-HMPREF3052_03365;Dbxref=NCBI_GP:OFO29546.1;Name=OFO29546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684009.1;locus_tag=HMPREF3052_03365;product=signal transduction protein;protein_id=OFO29546.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 1041 2411 . + . ID=gene-HMPREF3052_03370;Name=HMPREF3052_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03370 GCA_001815685.1|KV821607.1 Protein Homology CDS 1041 2411 . + 0 ID=cds-OFO29547.1;Parent=gene-HMPREF3052_03370;Dbxref=NCBI_GP:OFO29547.1;Name=OFO29547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272084.1;locus_tag=HMPREF3052_03370;product=signal recognition particle protein;protein_id=OFO29547.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 2579 3274 . - . ID=gene-HMPREF3052_03375;Name=HMPREF3052_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03375 GCA_001815685.1|KV821607.1 Protein Homology CDS 2579 3274 . - 0 ID=cds-OFO29548.1;Parent=gene-HMPREF3052_03375;Dbxref=NCBI_GP:OFO29548.1;Name=OFO29548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749428.1;locus_tag=HMPREF3052_03375;product=disulfide bond formation protein DsbA;protein_id=OFO29548.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 3445 5556 . - . ID=gene-HMPREF3052_03380;Name=HMPREF3052_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03380 GCA_001815685.1|KV821607.1 Protein Homology CDS 3445 5556 . - 0 ID=cds-OFO29549.1;Parent=gene-HMPREF3052_03380;Dbxref=NCBI_GP:OFO29549.1;Name=OFO29549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312440.1;locus_tag=HMPREF3052_03380;product=TonB-dependent receptor;protein_id=OFO29549.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 5716 6249 . - . ID=gene-HMPREF3052_03385;Name=HMPREF3052_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03385 GCA_001815685.1|KV821607.1 Protein Homology CDS 5716 6249 . - 0 ID=cds-OFO29550.1;Parent=gene-HMPREF3052_03385;Dbxref=NCBI_GP:OFO29550.1;Name=OFO29550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520270.1;locus_tag=HMPREF3052_03385;product=serine hydrolase;protein_id=OFO29550.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 6260 6604 . - . ID=gene-HMPREF3052_03390;Name=HMPREF3052_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03390 GCA_001815685.1|KV821607.1 Protein Homology CDS 6260 6604 . - 0 ID=cds-OFO29551.1;Parent=gene-HMPREF3052_03390;Dbxref=NCBI_GP:OFO29551.1;Name=OFO29551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744952.1;locus_tag=HMPREF3052_03390;product=hypothetical protein;protein_id=OFO29551.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 6591 7370 . - . ID=gene-HMPREF3052_03395;Name=HMPREF3052_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03395 GCA_001815685.1|KV821607.1 Protein Homology CDS 6591 7370 . - 0 ID=cds-OFO29552.1;Parent=gene-HMPREF3052_03395;Dbxref=NCBI_GP:OFO29552.1;Name=OFO29552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215052.1;locus_tag=HMPREF3052_03395;product=exodeoxyribonuclease III;protein_id=OFO29552.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 7415 8728 . - . ID=gene-HMPREF3052_03400;Name=HMPREF3052_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03400 GCA_001815685.1|KV821607.1 Protein Homology CDS 7415 8728 . - 0 ID=cds-OFO29553.1;Parent=gene-HMPREF3052_03400;Dbxref=NCBI_GP:OFO29553.1;Name=OFO29553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749422.1;locus_tag=HMPREF3052_03400;product=amino-acid N-acetyltransferase;protein_id=OFO29553.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 8725 9120 . - . ID=gene-HMPREF3052_03405;Name=HMPREF3052_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03405 GCA_001815685.1|KV821607.1 Protein Homology CDS 8725 9120 . - 0 ID=cds-OFO29554.1;Parent=gene-HMPREF3052_03405;Dbxref=NCBI_GP:OFO29554.1;Name=OFO29554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684003.1;locus_tag=HMPREF3052_03405;product=hypothetical protein;protein_id=OFO29554.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 9220 9861 . - . ID=gene-HMPREF3052_03410;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF3052_03410 GCA_001815685.1|KV821607.1 Protein Homology CDS 9220 9861 . - 0 ID=cds-OFO29555.1;Parent=gene-HMPREF3052_03410;Dbxref=NCBI_GP:OFO29555.1;Name=OFO29555.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682682.1;locus_tag=HMPREF3052_03410;product=orotate phosphoribosyltransferase;protein_id=OFO29555.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 10007 10477 . - . ID=gene-HMPREF3052_03415;Name=HMPREF3052_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03415 GCA_001815685.1|KV821607.1 Protein Homology CDS 10007 10477 . - 0 ID=cds-OFO29556.1;Parent=gene-HMPREF3052_03415;Dbxref=NCBI_GP:OFO29556.1;Name=OFO29556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWA0.1;locus_tag=HMPREF3052_03415;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=OFO29556.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 10640 11359 . - . ID=gene-HMPREF3052_03420;Name=HMPREF3052_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03420 GCA_001815685.1|KV821607.1 Protein Homology CDS 10640 11359 . - 0 ID=cds-OFO29557.1;Parent=gene-HMPREF3052_03420;Dbxref=NCBI_GP:OFO29557.1;Name=OFO29557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWH8.1;locus_tag=HMPREF3052_03420;product=UMP kinase;protein_id=OFO29557.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 11578 12432 . - . ID=gene-HMPREF3052_03425;Name=HMPREF3052_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03425 GCA_001815685.1|KV821607.1 Protein Homology CDS 11578 12432 . - 0 ID=cds-OFO29558.1;Parent=gene-HMPREF3052_03425;Dbxref=NCBI_GP:OFO29558.1;Name=OFO29558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795802.1;locus_tag=HMPREF3052_03425;product=elongation factor Ts;protein_id=OFO29558.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 12556 13284 . - . ID=gene-HMPREF3052_03430;Name=HMPREF3052_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03430 GCA_001815685.1|KV821607.1 Protein Homology CDS 12556 13284 . - 0 ID=cds-OFO29559.1;Parent=gene-HMPREF3052_03430;Dbxref=NCBI_GP:OFO29559.1;Name=OFO29559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219982.1;locus_tag=HMPREF3052_03430;product=30S ribosomal protein S2;protein_id=OFO29559.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 13462 13704 . - . ID=gene-HMPREF3052_03435;Name=HMPREF3052_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03435 GCA_001815685.1|KV821607.1 Protein Homology CDS 13462 13704 . - 0 ID=cds-OFO29560.1;Parent=gene-HMPREF3052_03435;Dbxref=NCBI_GP:OFO29560.1;Name=OFO29560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520263.1;locus_tag=HMPREF3052_03435;product=hypothetical protein;protein_id=OFO29560.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 13783 14376 . + . ID=gene-HMPREF3052_03440;Name=HMPREF3052_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03440 GCA_001815685.1|KV821607.1 Protein Homology CDS 13783 14376 . + 0 ID=cds-OFO29561.1;Parent=gene-HMPREF3052_03440;Dbxref=NCBI_GP:OFO29561.1;Name=OFO29561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749412.1;locus_tag=HMPREF3052_03440;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=OFO29561.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 14652 15611 . + . ID=gene-HMPREF3052_03445;Name=HMPREF3052_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03445 GCA_001815685.1|KV821607.1 GeneMarkS+ CDS 14652 15611 . + 0 ID=cds-OFO29562.1;Parent=gene-HMPREF3052_03445;Dbxref=NCBI_GP:OFO29562.1;Name=OFO29562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03445;product=hypothetical protein;protein_id=OFO29562.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 15858 17753 . - . ID=gene-HMPREF3052_03450;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF3052_03450 GCA_001815685.1|KV821607.1 Protein Homology CDS 15858 17753 . - 0 ID=cds-OFO29563.1;Parent=gene-HMPREF3052_03450;Dbxref=NCBI_GP:OFO29563.1;Name=OFO29563.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270047.1;locus_tag=HMPREF3052_03450;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG;protein_id=OFO29563.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 17836 18840 . - . ID=gene-HMPREF3052_03455;Name=HMPREF3052_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03455 GCA_001815685.1|KV821607.1 Protein Homology CDS 17836 18840 . - 0 ID=cds-OFO29564.1;Parent=gene-HMPREF3052_03455;Dbxref=NCBI_GP:OFO29564.1;Name=OFO29564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312645.1;locus_tag=HMPREF3052_03455;product=aminoglycoside phosphotransferase;protein_id=OFO29564.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 18955 21309 . + . ID=gene-HMPREF3052_03460;Name=HMPREF3052_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03460 GCA_001815685.1|KV821607.1 Protein Homology CDS 18955 21309 . + 0 ID=cds-OFO29565.1;Parent=gene-HMPREF3052_03460;Dbxref=NCBI_GP:OFO29565.1;Name=OFO29565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749405.1;locus_tag=HMPREF3052_03460;product=LPS biosynthesis protein;protein_id=OFO29565.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 21306 22295 . + . ID=gene-HMPREF3052_03465;Name=HMPREF3052_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03465 GCA_001815685.1|KV821607.1 Protein Homology CDS 21306 22295 . + 0 ID=cds-OFO29566.1;Parent=gene-HMPREF3052_03465;Dbxref=NCBI_GP:OFO29566.1;Name=OFO29566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684047.1;locus_tag=HMPREF3052_03465;product=peptidylprolyl isomerase;protein_id=OFO29566.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 22402 23211 . + . ID=gene-HMPREF3052_03470;Name=HMPREF3052_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03470 GCA_001815685.1|KV821607.1 Protein Homology CDS 22402 23211 . + 0 ID=cds-OFO29567.1;Parent=gene-HMPREF3052_03470;Dbxref=NCBI_GP:OFO29567.1;Name=OFO29567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680650.1;locus_tag=HMPREF3052_03470;product=esterase;protein_id=OFO29567.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 23469 24089 . - . ID=gene-HMPREF3052_03475;Name=HMPREF3052_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03475 GCA_001815685.1|KV821607.1 Protein Homology CDS 23469 24089 . - 0 ID=cds-OFO29568.1;Parent=gene-HMPREF3052_03475;Dbxref=NCBI_GP:OFO29568.1;Name=OFO29568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749398.1;locus_tag=HMPREF3052_03475;product=hypothetical protein;protein_id=OFO29568.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 24309 25196 . - . ID=gene-HMPREF3052_03480;Name=HMPREF3052_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03480 GCA_001815685.1|KV821607.1 Protein Homology CDS 24309 25196 . - 0 ID=cds-OFO29569.1;Parent=gene-HMPREF3052_03480;Dbxref=NCBI_GP:OFO29569.1;Name=OFO29569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749396.1;locus_tag=HMPREF3052_03480;product=rRNA (cytidine-2'-O-)-methyltransferase;protein_id=OFO29569.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 25262 25609 . + . ID=gene-HMPREF3052_03485;Name=HMPREF3052_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03485 GCA_001815685.1|KV821607.1 Protein Homology CDS 25262 25609 . + 0 ID=cds-OFO29570.1;Parent=gene-HMPREF3052_03485;Dbxref=NCBI_GP:OFO29570.1;Name=OFO29570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JWJ8.1;locus_tag=HMPREF3052_03485;product=hypothetical protein;protein_id=OFO29570.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 25614 26207 . + . ID=gene-HMPREF3052_03490;Name=HMPREF3052_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03490 GCA_001815685.1|KV821607.1 Protein Homology CDS 25614 26207 . + 0 ID=cds-OFO29571.1;Parent=gene-HMPREF3052_03490;Dbxref=NCBI_GP:OFO29571.1;Name=OFO29571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686872.1;locus_tag=HMPREF3052_03490;product=phosphoheptose isomerase;protein_id=OFO29571.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 26281 26892 . + . ID=gene-HMPREF3052_03495;Name=HMPREF3052_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03495 GCA_001815685.1|KV821607.1 Protein Homology CDS 26281 26892 . + 0 ID=cds-OFO29572.1;Parent=gene-HMPREF3052_03495;Dbxref=NCBI_GP:OFO29572.1;Name=OFO29572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680644.1;locus_tag=HMPREF3052_03495;product=hemolysin;protein_id=OFO29572.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 26960 27565 . + . ID=gene-HMPREF3052_03500;Name=HMPREF3052_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03500 GCA_001815685.1|KV821607.1 Protein Homology CDS 26960 27565 . + 0 ID=cds-OFO29573.1;Parent=gene-HMPREF3052_03500;Dbxref=NCBI_GP:OFO29573.1;Name=OFO29573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520246.1;locus_tag=HMPREF3052_03500;product=hypothetical protein;protein_id=OFO29573.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 27629 28408 . + . ID=gene-HMPREF3052_03505;Name=HMPREF3052_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03505 GCA_001815685.1|KV821607.1 Protein Homology CDS 27629 28408 . + 0 ID=cds-OFO29574.1;Parent=gene-HMPREF3052_03505;Dbxref=NCBI_GP:OFO29574.1;Name=OFO29574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677158.1;locus_tag=HMPREF3052_03505;product=type I methionyl aminopeptidase;protein_id=OFO29574.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 28813 29106 . + . ID=gene-HMPREF3052_03510;Name=HMPREF3052_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03510 GCA_001815685.1|KV821607.1 Protein Homology CDS 28813 29106 . + 0 ID=cds-OFO29575.1;Parent=gene-HMPREF3052_03510;Dbxref=NCBI_GP:OFO29575.1;Name=OFO29575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175004.1;locus_tag=HMPREF3052_03510;product=transcriptional regulator;protein_id=OFO29575.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 29202 30152 . - . ID=gene-HMPREF3052_03515;Name=HMPREF3052_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03515 GCA_001815685.1|KV821607.1 Protein Homology CDS 29202 30152 . - 0 ID=cds-OFO29576.1;Parent=gene-HMPREF3052_03515;Dbxref=NCBI_GP:OFO29576.1;Name=OFO29576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684005.1;locus_tag=HMPREF3052_03515;product=alpha/beta hydrolase;protein_id=OFO29576.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 30165 30791 . - . ID=gene-HMPREF3052_03520;Name=HMPREF3052_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03520 GCA_001815685.1|KV821607.1 Protein Homology CDS 30165 30791 . - 0 ID=cds-OFO29577.1;Parent=gene-HMPREF3052_03520;Dbxref=NCBI_GP:OFO29577.1;Name=OFO29577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520243.1;locus_tag=HMPREF3052_03520;product=phosphoesterase;protein_id=OFO29577.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 30791 31591 . - . ID=gene-HMPREF3052_03525;Name=HMPREF3052_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03525 GCA_001815685.1|KV821607.1 Protein Homology CDS 30791 31591 . - 0 ID=cds-OFO29578.1;Parent=gene-HMPREF3052_03525;Dbxref=NCBI_GP:OFO29578.1;Name=OFO29578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749379.1;locus_tag=HMPREF3052_03525;product=damage-inducible protein CinA;protein_id=OFO29578.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 31702 33045 . + . ID=gene-HMPREF3052_03530;Name=HMPREF3052_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03530 GCA_001815685.1|KV821607.1 Protein Homology CDS 31702 33045 . + 0 ID=cds-OFO29579.1;Parent=gene-HMPREF3052_03530;Dbxref=NCBI_GP:OFO29579.1;Name=OFO29579.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWJ8.1;locus_tag=HMPREF3052_03530;product=argininosuccinate synthase;protein_id=OFO29579.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank pseudogene 33135 33731 . + . ID=gene-HMPREF3052_03535;Name=HMPREF3052_03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03535;pseudo=true GCA_001815685.1|KV821607.1 Protein Homology CDS 33135 33731 . + 0 ID=cds-HMPREF3052_03535;Parent=gene-HMPREF3052_03535;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310860.1;locus_tag=HMPREF3052_03535;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 33804 34175 . - . ID=gene-HMPREF3052_03540;Name=HMPREF3052_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03540 GCA_001815685.1|KV821607.1 Protein Homology CDS 33804 34175 . - 0 ID=cds-OFO29580.1;Parent=gene-HMPREF3052_03540;Dbxref=NCBI_GP:OFO29580.1;Name=OFO29580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681338.1;locus_tag=HMPREF3052_03540;product=MarR family transcriptional regulator;protein_id=OFO29580.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 34238 35020 . - . ID=gene-HMPREF3052_03545;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=HMPREF3052_03545 GCA_001815685.1|KV821607.1 Protein Homology CDS 34238 35020 . - 0 ID=cds-OFO29581.1;Parent=gene-HMPREF3052_03545;Dbxref=NCBI_GP:OFO29581.1;Name=OFO29581.1;Note=involved in tryptophan biosynthesis%3B amino acid biosynthesis%3B converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water;gbkey=CDS;gene=trpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581314.1;locus_tag=HMPREF3052_03545;product=indole-3-glycerol-phosphate synthase;protein_id=OFO29581.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 35163 36635 . - . ID=gene-HMPREF3052_03550;Name=HMPREF3052_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03550 GCA_001815685.1|KV821607.1 Protein Homology CDS 35163 36635 . - 0 ID=cds-OFO29582.1;Parent=gene-HMPREF3052_03550;Dbxref=NCBI_GP:OFO29582.1;Name=OFO29582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683986.1;locus_tag=HMPREF3052_03550;product=malate:quinone oxidoreductase;protein_id=OFO29582.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 37066 37560 . + . ID=gene-HMPREF3052_03555;Name=HMPREF3052_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03555 GCA_001815685.1|KV821607.1 Protein Homology CDS 37066 37560 . + 0 ID=cds-OFO29583.1;Parent=gene-HMPREF3052_03555;Dbxref=NCBI_GP:OFO29583.1;Name=OFO29583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681345.1;locus_tag=HMPREF3052_03555;product=hypothetical protein;protein_id=OFO29583.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 37643 38272 . + . ID=gene-HMPREF3052_03560;Name=HMPREF3052_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03560 GCA_001815685.1|KV821607.1 Protein Homology CDS 37643 38272 . + 0 ID=cds-OFO29584.1;Parent=gene-HMPREF3052_03560;Dbxref=NCBI_GP:OFO29584.1;Name=OFO29584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520234.1;locus_tag=HMPREF3052_03560;product=16S rRNA methyltransferase G;protein_id=OFO29584.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 38340 39110 . + . ID=gene-HMPREF3052_03565;Name=HMPREF3052_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03565 GCA_001815685.1|KV821607.1 Protein Homology CDS 38340 39110 . + 0 ID=cds-OFO29585.1;Parent=gene-HMPREF3052_03565;Dbxref=NCBI_GP:OFO29585.1;Name=OFO29585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520233.1;locus_tag=HMPREF3052_03565;product=chromosome partitioning protein;protein_id=OFO29585.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 39359 40639 . - . ID=gene-HMPREF3052_03570;Name=HMPREF3052_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03570 GCA_001815685.1|KV821607.1 GeneMarkS+ CDS 39359 40639 . - 0 ID=cds-OFO29586.1;Parent=gene-HMPREF3052_03570;Dbxref=NCBI_GP:OFO29586.1;Name=OFO29586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03570;product=hypothetical protein;protein_id=OFO29586.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 40640 40888 . + . ID=gene-HMPREF3052_03575;Name=HMPREF3052_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03575 GCA_001815685.1|KV821607.1 Protein Homology CDS 40640 40888 . + 0 ID=cds-OFO29587.1;Parent=gene-HMPREF3052_03575;Dbxref=NCBI_GP:OFO29587.1;Name=OFO29587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684029.1;locus_tag=HMPREF3052_03575;product=hypothetical protein;protein_id=OFO29587.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 41159 43153 . - . ID=gene-HMPREF3052_03580;Name=HMPREF3052_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03580 GCA_001815685.1|KV821607.1 GeneMarkS+ CDS 41159 43153 . - 0 ID=cds-OFO29588.1;Parent=gene-HMPREF3052_03580;Dbxref=NCBI_GP:OFO29588.1;Name=OFO29588.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03580;product=hypothetical protein;protein_id=OFO29588.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 43204 45618 . - . ID=gene-HMPREF3052_03585;Name=HMPREF3052_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03585 GCA_001815685.1|KV821607.1 Protein Homology CDS 43204 45618 . - 0 ID=cds-OFO29600.1;Parent=gene-HMPREF3052_03585;Dbxref=NCBI_GP:OFO29600.1;Name=OFO29600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343898.1;locus_tag=HMPREF3052_03585;product=ATP-dependent helicase;protein_id=OFO29600.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 46985 47212 . + . ID=gene-HMPREF3052_03590;Name=HMPREF3052_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03590 GCA_001815685.1|KV821607.1 Protein Homology CDS 46985 47212 . + 0 ID=cds-OFO29601.1;Parent=gene-HMPREF3052_03590;Dbxref=NCBI_GP:OFO29601.1;Name=OFO29601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006249110.1;locus_tag=HMPREF3052_03590;product=phosphoribosylglycinamide formyltransferase;protein_id=OFO29601.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 47443 48129 . + . ID=gene-HMPREF3052_03595;Name=HMPREF3052_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03595 GCA_001815685.1|KV821607.1 Protein Homology CDS 47443 48129 . + 0 ID=cds-OFO29589.1;Parent=gene-HMPREF3052_03595;Dbxref=NCBI_GP:OFO29589.1;Name=OFO29589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012503925.1;locus_tag=HMPREF3052_03595;product=hypothetical protein;protein_id=OFO29589.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank pseudogene 48494 49885 . - . ID=gene-HMPREF3052_03600;Name=HMPREF3052_03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03600;pseudo=true GCA_001815685.1|KV821607.1 Protein Homology CDS 48494 49885 . - 0 ID=cds-HMPREF3052_03600;Parent=gene-HMPREF3052_03600;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768676.1;locus_tag=HMPREF3052_03600;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 49994 50380 . - . ID=gene-HMPREF3052_03605;Name=HMPREF3052_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03605 GCA_001815685.1|KV821607.1 Protein Homology CDS 49994 50380 . - 0 ID=cds-OFO29590.1;Parent=gene-HMPREF3052_03605;Dbxref=NCBI_GP:OFO29590.1;Name=OFO29590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214954.1;locus_tag=HMPREF3052_03605;product=ribosome silencing factor RsfS;protein_id=OFO29590.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 50439 51044 . - . ID=gene-HMPREF3052_03610;Name=HMPREF3052_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03610 GCA_001815685.1|KV821607.1 Protein Homology CDS 50439 51044 . - 0 ID=cds-OFO29591.1;Parent=gene-HMPREF3052_03610;Dbxref=NCBI_GP:OFO29591.1;Name=OFO29591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F556.1;locus_tag=HMPREF3052_03610;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=OFO29591.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 51063 51647 . - . ID=gene-HMPREF3052_03615;Name=HMPREF3052_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03615 GCA_001815685.1|KV821607.1 Protein Homology CDS 51063 51647 . - 0 ID=cds-OFO29602.1;Parent=gene-HMPREF3052_03615;Dbxref=NCBI_GP:OFO29602.1;Name=OFO29602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690382.1;locus_tag=HMPREF3052_03615;product=carbonic anhydrase;protein_id=OFO29602.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 51771 52661 . + . ID=gene-HMPREF3052_03620;Name=HMPREF3052_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03620 GCA_001815685.1|KV821607.1 Protein Homology CDS 51771 52661 . + 0 ID=cds-OFO29592.1;Parent=gene-HMPREF3052_03620;Dbxref=NCBI_GP:OFO29592.1;Name=OFO29592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520225.1;locus_tag=HMPREF3052_03620;product=NUDIX hydrolase;protein_id=OFO29592.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 52677 53618 . + . ID=gene-HMPREF3052_03625;Name=HMPREF3052_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03625 GCA_001815685.1|KV821607.1 Protein Homology CDS 52677 53618 . + 0 ID=cds-OFO29593.1;Parent=gene-HMPREF3052_03625;Dbxref=NCBI_GP:OFO29593.1;Name=OFO29593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749334.1;locus_tag=HMPREF3052_03625;product=ABC transporter ATP-binding protein;protein_id=OFO29593.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 53903 54625 . - . ID=gene-HMPREF3052_03630;Name=HMPREF3052_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03630 GCA_001815685.1|KV821607.1 GeneMarkS+ CDS 53903 54625 . - 0 ID=cds-OFO29594.1;Parent=gene-HMPREF3052_03630;Dbxref=NCBI_GP:OFO29594.1;Name=OFO29594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03630;product=hypothetical protein;protein_id=OFO29594.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 54707 57538 . - . ID=gene-HMPREF3052_03635;Name=HMPREF3052_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03635 GCA_001815685.1|KV821607.1 Protein Homology CDS 54707 57538 . - 0 ID=cds-OFO29595.1;Parent=gene-HMPREF3052_03635;Dbxref=NCBI_GP:OFO29595.1;Name=OFO29595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520221.1;locus_tag=HMPREF3052_03635;product=valine--tRNA ligase;protein_id=OFO29595.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 57635 58444 . - . ID=gene-HMPREF3052_03640;Name=HMPREF3052_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03640 GCA_001815685.1|KV821607.1 Protein Homology CDS 57635 58444 . - 0 ID=cds-OFO29596.1;Parent=gene-HMPREF3052_03640;Dbxref=NCBI_GP:OFO29596.1;Name=OFO29596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312665.1;locus_tag=HMPREF3052_03640;product=zinc transporter ZupT;protein_id=OFO29596.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 58698 59648 . - . ID=gene-HMPREF3052_03645;Name=HMPREF3052_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03645 GCA_001815685.1|KV821607.1 Protein Homology CDS 58698 59648 . - 0 ID=cds-OFO29597.1;Parent=gene-HMPREF3052_03645;Dbxref=NCBI_GP:OFO29597.1;Name=OFO29597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427462.1;locus_tag=HMPREF3052_03645;product=transposase;protein_id=OFO29597.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 59946 61124 . - . ID=gene-HMPREF3052_03650;Name=HMPREF3052_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03650 GCA_001815685.1|KV821607.1 Protein Homology CDS 59946 61124 . - 0 ID=cds-OFO29598.1;Parent=gene-HMPREF3052_03650;Dbxref=NCBI_GP:OFO29598.1;Name=OFO29598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780460.1;locus_tag=HMPREF3052_03650;product=hypothetical protein;protein_id=OFO29598.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank gene 61129 61419 . - . ID=gene-HMPREF3052_03655;Name=HMPREF3052_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03655 GCA_001815685.1|KV821607.1 Protein Homology CDS 61129 61419 . - 0 ID=cds-OFO29599.1;Parent=gene-HMPREF3052_03655;Dbxref=NCBI_GP:OFO29599.1;Name=OFO29599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711252.1;locus_tag=HMPREF3052_03655;product=hypothetical protein;protein_id=OFO29599.1;transl_table=11 GCA_001815685.1|KV821607.1 Genbank pseudogene 61421 61910 . - . ID=gene-HMPREF3052_03660;Name=HMPREF3052_03660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03660;pseudo=true GCA_001815685.1|KV821607.1 Protein Homology CDS 61421 61910 . - 1 ID=cds-HMPREF3052_03660;Parent=gene-HMPREF3052_03660;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687635.1;locus_tag=HMPREF3052_03660;product=TspB protein;pseudo=true;transl_table=11 ##sequence-region KV821608.1 1 1983 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821608.1 Genbank region 1 1983 . + . ID=KV821608.1:1..1983;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821608.1 Genbank pseudogene 1 180 . - . ID=gene-HMPREF3052_03665;Name=HMPREF3052_03665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03665;pseudo=true GCA_001815685.1|KV821608.1 GeneMarkS+ CDS 1 180 . - 0 ID=cds-HMPREF3052_03665;Parent=gene-HMPREF3052_03665;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03665;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821608.1 Genbank gene 417 1055 . - . ID=gene-HMPREF3052_03670;Name=HMPREF3052_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03670 GCA_001815685.1|KV821608.1 Protein Homology CDS 417 1055 . - 0 ID=cds-OFO29536.1;Parent=gene-HMPREF3052_03670;Dbxref=NCBI_GP:OFO29536.1;Name=OFO29536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740777.1;locus_tag=HMPREF3052_03670;product=heme oxygenase;protein_id=OFO29536.1;transl_table=11 GCA_001815685.1|KV821608.1 Genbank gene 1493 1951 . + . ID=gene-HMPREF3052_03675;Name=HMPREF3052_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03675 GCA_001815685.1|KV821608.1 Protein Homology CDS 1493 1951 . + 0 ID=cds-OFO29537.1;Parent=gene-HMPREF3052_03675;Dbxref=NCBI_GP:OFO29537.1;Name=OFO29537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740774.1;locus_tag=HMPREF3052_03675;product=gamma carbonic anhydrase family protein;protein_id=OFO29537.1;transl_table=11 ##sequence-region KV821609.1 1 452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821609.1 Genbank region 1 452 . + . ID=KV821609.1:1..452;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821609.1 Genbank pseudogene 1 452 . - . ID=gene-HMPREF3052_03680;Name=HMPREF3052_03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03680;pseudo=true GCA_001815685.1|KV821609.1 GeneMarkS+ CDS 1 452 . - 0 ID=cds-HMPREF3052_03680;Parent=gene-HMPREF3052_03680;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03680;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821610.1 1 306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821610.1 Genbank region 1 306 . + . ID=KV821610.1:1..306;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821610.1 Genbank pseudogene 1 306 . - . ID=gene-HMPREF3052_03685;Name=HMPREF3052_03685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03685;pseudo=true GCA_001815685.1|KV821610.1 Protein Homology CDS 1 306 . - 2 ID=cds-HMPREF3052_03685;Parent=gene-HMPREF3052_03685;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684692.1;locus_tag=HMPREF3052_03685;product=integrase;pseudo=true;transl_table=11 ##sequence-region KV821611.1 1 14363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821611.1 Genbank region 1 14363 . + . ID=KV821611.1:1..14363;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821611.1 Genbank gene 1 818 . - . ID=gene-HMPREF3052_03690;Name=HMPREF3052_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03690;partial=true;start_range=.,1 GCA_001815685.1|KV821611.1 Protein Homology CDS 1 818 . - 0 ID=cds-OFO29477.1;Parent=gene-HMPREF3052_03690;Dbxref=NCBI_GP:OFO29477.1;Name=OFO29477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283520.1;locus_tag=HMPREF3052_03690;partial=true;product=undecaprenyl-diphosphatase;protein_id=OFO29477.1;start_range=.,1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 863 1504 . - . ID=gene-HMPREF3052_03695;Name=HMPREF3052_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03695 GCA_001815685.1|KV821611.1 Protein Homology CDS 863 1504 . - 0 ID=cds-OFO29488.1;Parent=gene-HMPREF3052_03695;Dbxref=NCBI_GP:OFO29488.1;Name=OFO29488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682051.1;locus_tag=HMPREF3052_03695;product=disulfide bond formation protein DsbA;protein_id=OFO29488.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 1516 2526 . - . ID=gene-HMPREF3052_03700;Name=HMPREF3052_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03700 GCA_001815685.1|KV821611.1 Protein Homology CDS 1516 2526 . - 0 ID=cds-OFO29478.1;Parent=gene-HMPREF3052_03700;Dbxref=NCBI_GP:OFO29478.1;Name=OFO29478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757158.1;locus_tag=HMPREF3052_03700;product=cell division protein FtsN;protein_id=OFO29478.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 2681 4177 . - . ID=gene-HMPREF3052_03705;Name=HMPREF3052_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03705 GCA_001815685.1|KV821611.1 Protein Homology CDS 2681 4177 . - 0 ID=cds-OFO29479.1;Parent=gene-HMPREF3052_03705;Dbxref=NCBI_GP:OFO29479.1;Name=OFO29479.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010981279.1;locus_tag=HMPREF3052_03705;product=ATP-dependent protease;protein_id=OFO29479.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 4191 4511 . - . ID=gene-HMPREF3052_03710;Name=HMPREF3052_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03710 GCA_001815685.1|KV821611.1 Protein Homology CDS 4191 4511 . - 0 ID=cds-OFO29480.1;Parent=gene-HMPREF3052_03710;Dbxref=NCBI_GP:OFO29480.1;Name=OFO29480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763371.1;locus_tag=HMPREF3052_03710;product=membrane fusogenic activity family protein;protein_id=OFO29480.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 4621 5790 . - . ID=gene-HMPREF3052_03715;Name=HMPREF3052_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03715 GCA_001815685.1|KV821611.1 Protein Homology CDS 4621 5790 . - 0 ID=cds-OFO29481.1;Parent=gene-HMPREF3052_03715;Dbxref=NCBI_GP:OFO29481.1;Name=OFO29481.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240743.1;locus_tag=HMPREF3052_03715;product=methionine adenosyltransferase;protein_id=OFO29481.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 6183 7058 . + . ID=gene-HMPREF3052_03720;Name=HMPREF3052_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03720 GCA_001815685.1|KV821611.1 Protein Homology CDS 6183 7058 . + 0 ID=cds-OFO29482.1;Parent=gene-HMPREF3052_03720;Dbxref=NCBI_GP:OFO29482.1;Name=OFO29482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684463.1;locus_tag=HMPREF3052_03720;product=lauroyl acyltransferase;protein_id=OFO29482.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 7310 10597 . + . ID=gene-HMPREF3052_03725;Name=HMPREF3052_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03725 GCA_001815685.1|KV821611.1 Protein Homology CDS 7310 10597 . + 0 ID=cds-OFO29483.1;Parent=gene-HMPREF3052_03725;Dbxref=NCBI_GP:OFO29483.1;Name=OFO29483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684456.1;locus_tag=HMPREF3052_03725;product=exodeoxyribonuclease V subunit gamma;protein_id=OFO29483.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 10601 11098 . + . ID=gene-HMPREF3052_03730;Name=HMPREF3052_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03730 GCA_001815685.1|KV821611.1 Protein Homology CDS 10601 11098 . + 0 ID=cds-OFO29484.1;Parent=gene-HMPREF3052_03730;Dbxref=NCBI_GP:OFO29484.1;Name=OFO29484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684464.1;locus_tag=HMPREF3052_03730;product=hypothetical protein;protein_id=OFO29484.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 11222 12391 . - . ID=gene-HMPREF3052_03735;Name=HMPREF3052_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03735 GCA_001815685.1|KV821611.1 Protein Homology CDS 11222 12391 . - 0 ID=cds-OFO29485.1;Parent=gene-HMPREF3052_03735;Dbxref=NCBI_GP:OFO29485.1;Name=OFO29485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235442.1;locus_tag=HMPREF3052_03735;product=hypothetical protein;protein_id=OFO29485.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 12417 12740 . - . ID=gene-HMPREF3052_03740;Name=HMPREF3052_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03740 GCA_001815685.1|KV821611.1 Protein Homology CDS 12417 12740 . - 0 ID=cds-OFO29486.1;Parent=gene-HMPREF3052_03740;Dbxref=NCBI_GP:OFO29486.1;Name=OFO29486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521063.1;locus_tag=HMPREF3052_03740;product=hypothetical protein;protein_id=OFO29486.1;transl_table=11 GCA_001815685.1|KV821611.1 Genbank gene 12959 13957 . + . ID=gene-HMPREF3052_03745;Name=HMPREF3052_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03745 GCA_001815685.1|KV821611.1 Protein Homology CDS 12959 13957 . + 0 ID=cds-OFO29487.1;Parent=gene-HMPREF3052_03745;Dbxref=NCBI_GP:OFO29487.1;Name=OFO29487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687603.1;locus_tag=HMPREF3052_03745;product=branched chain amino acid aminotransferase;protein_id=OFO29487.1;transl_table=11 ##sequence-region KV821612.1 1 1607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821612.1 Genbank region 1 1607 . + . ID=KV821612.1:1..1607;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821612.1 Genbank gene 6 308 . + . ID=gene-HMPREF3052_03750;Name=HMPREF3052_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03750 GCA_001815685.1|KV821612.1 Protein Homology CDS 6 308 . + 0 ID=cds-OFO29460.1;Parent=gene-HMPREF3052_03750;Dbxref=NCBI_GP:OFO29460.1;Name=OFO29460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683287.1;locus_tag=HMPREF3052_03750;product=conjugal transfer protein TrbM;protein_id=OFO29460.1;transl_table=11 GCA_001815685.1|KV821612.1 Genbank pseudogene 359 922 . + . ID=gene-HMPREF3052_03755;Name=HMPREF3052_03755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03755;pseudo=true GCA_001815685.1|KV821612.1 Protein Homology CDS 359 922 . + 0 ID=cds-HMPREF3052_03755;Parent=gene-HMPREF3052_03755;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683534.1;locus_tag=HMPREF3052_03755;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821612.1 Genbank gene 1031 1252 . + . ID=gene-HMPREF3052_03760;Name=HMPREF3052_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03760 GCA_001815685.1|KV821612.1 GeneMarkS+ CDS 1031 1252 . + 0 ID=cds-OFO29459.1;Parent=gene-HMPREF3052_03760;Dbxref=NCBI_GP:OFO29459.1;Name=OFO29459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_03760;product=hypothetical protein;protein_id=OFO29459.1;transl_table=11 ##sequence-region KV821613.1 1 1666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821613.1 Genbank region 1 1666 . + . ID=KV821613.1:1..1666;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821613.1 Genbank gene 247 1167 . + . ID=gene-HMPREF3052_03765;Name=HMPREF3052_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03765 GCA_001815685.1|KV821613.1 Protein Homology CDS 247 1167 . + 0 ID=cds-OFO29388.1;Parent=gene-HMPREF3052_03765;Dbxref=NCBI_GP:OFO29388.1;Name=OFO29388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677959.1;locus_tag=HMPREF3052_03765;product=aspartate carbamoyltransferase;protein_id=OFO29388.1;transl_table=11 GCA_001815685.1|KV821613.1 Genbank gene 1178 1636 . + . ID=gene-HMPREF3052_03770;Name=HMPREF3052_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03770 GCA_001815685.1|KV821613.1 Protein Homology CDS 1178 1636 . + 0 ID=cds-OFO29389.1;Parent=gene-HMPREF3052_03770;Dbxref=NCBI_GP:OFO29389.1;Name=OFO29389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245387.1;locus_tag=HMPREF3052_03770;product=aspartate carbamoyltransferase regulatory subunit;protein_id=OFO29389.1;transl_table=11 ##sequence-region KV821614.1 1 7328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821614.1 Genbank region 1 7328 . + . ID=KV821614.1:1..7328;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821614.1 Genbank pseudogene 25 804 . + . ID=gene-HMPREF3052_03775;Name=HMPREF3052_03775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03775;pseudo=true GCA_001815685.1|KV821614.1 Protein Homology CDS 25 804 . + 0 ID=cds-HMPREF3052_03775;Parent=gene-HMPREF3052_03775;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714176.1;locus_tag=HMPREF3052_03775;product=UDP-glucose 4-epimerase;pseudo=true;transl_table=11 GCA_001815685.1|KV821614.1 Genbank gene 920 1984 . + . ID=gene-HMPREF3052_03780;Name=HMPREF3052_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03780 GCA_001815685.1|KV821614.1 Protein Homology CDS 920 1984 . + 0 ID=cds-OFO29376.1;Parent=gene-HMPREF3052_03780;Dbxref=NCBI_GP:OFO29376.1;Name=OFO29376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761472.1;locus_tag=HMPREF3052_03780;product=dTDP-glucose 4%2C6-dehydratase;protein_id=OFO29376.1;transl_table=11 GCA_001815685.1|KV821614.1 Genbank gene 2087 2410 . + . ID=gene-HMPREF3052_03785;Name=HMPREF3052_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03785 GCA_001815685.1|KV821614.1 Protein Homology CDS 2087 2410 . + 0 ID=cds-OFO29378.1;Parent=gene-HMPREF3052_03785;Dbxref=NCBI_GP:OFO29378.1;Name=OFO29378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761470.1;locus_tag=HMPREF3052_03785;product=adenosylhomocysteinase;protein_id=OFO29378.1;transl_table=11 GCA_001815685.1|KV821614.1 Genbank gene 2464 3330 . + . ID=gene-HMPREF3052_03790;Name=HMPREF3052_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03790 GCA_001815685.1|KV821614.1 Protein Homology CDS 2464 3330 . + 0 ID=cds-OFO29377.1;Parent=gene-HMPREF3052_03790;Dbxref=NCBI_GP:OFO29377.1;Name=OFO29377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231451.1;locus_tag=HMPREF3052_03790;product=glucose-1-phosphate thymidylyltransferase;protein_id=OFO29377.1;transl_table=11 GCA_001815685.1|KV821614.1 Genbank gene 3384 3923 . + . ID=gene-HMPREF3052_03795;Name=HMPREF3052_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03795 GCA_001815685.1|KV821614.1 Protein Homology CDS 3384 3923 . + 0 ID=cds-OFO29379.1;Parent=gene-HMPREF3052_03795;Dbxref=NCBI_GP:OFO29379.1;Name=OFO29379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761465.1;locus_tag=HMPREF3052_03795;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=OFO29379.1;transl_table=11 GCA_001815685.1|KV821614.1 Genbank pseudogene 3947 6060 . + . ID=gene-HMPREF3052_03800;Name=HMPREF3052_03800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03800;pseudo=true GCA_001815685.1|KV821614.1 Protein Homology CDS 3947 6060 . + 0 ID=cds-HMPREF3052_03800;Parent=gene-HMPREF3052_03800;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002243182.1;locus_tag=HMPREF3052_03800;product=capsule biosynthesis protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821614.1 Genbank pseudogene 6197 7238 . + . ID=gene-HMPREF3052_03805;Name=HMPREF3052_03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03805;pseudo=true GCA_001815685.1|KV821614.1 Protein Homology CDS 6197 7238 . + 0 ID=cds-HMPREF3052_03805;Parent=gene-HMPREF3052_03805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237518.1;locus_tag=HMPREF3052_03805;product=capsule biosynthesis protein;pseudo=true;transl_table=11 ##sequence-region KV821615.1 1 601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821615.1 Genbank region 1 601 . + . ID=KV821615.1:1..601;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821615.1 Genbank pseudogene 1 601 . - . ID=gene-HMPREF3052_03810;Name=HMPREF3052_03810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03810;pseudo=true GCA_001815685.1|KV821615.1 Protein Homology CDS 1 601 . - 1 ID=cds-HMPREF3052_03810;Parent=gene-HMPREF3052_03810;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003697216.1;locus_tag=HMPREF3052_03810;product=terminase;pseudo=true;transl_table=11 ##sequence-region KV821616.1 1 5260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821616.1 Genbank region 1 5260 . + . ID=KV821616.1:1..5260;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821616.1 Genbank pseudogene 1 367 . + . ID=gene-HMPREF3052_03815;Name=HMPREF3052_03815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_03815;pseudo=true GCA_001815685.1|KV821616.1 Protein Homology CDS 1 367 . + 1 ID=cds-HMPREF3052_03815;Parent=gene-HMPREF3052_03815;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273261.1;locus_tag=HMPREF3052_03815;product=glutamate racemase;pseudo=true;transl_table=11 GCA_001815685.1|KV821616.1 Genbank gene 505 2283 . + . ID=gene-HMPREF3052_03820;Name=HMPREF3052_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03820 GCA_001815685.1|KV821616.1 Protein Homology CDS 505 2283 . + 0 ID=cds-OFO29327.1;Parent=gene-HMPREF3052_03820;Dbxref=NCBI_GP:OFO29327.1;Name=OFO29327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256136.1;locus_tag=HMPREF3052_03820;product=transferrin-binding protein;protein_id=OFO29327.1;transl_table=11 GCA_001815685.1|KV821616.1 Genbank gene 2370 5099 . + . ID=gene-HMPREF3052_03825;Name=HMPREF3052_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03825 GCA_001815685.1|KV821616.1 Protein Homology CDS 2370 5099 . + 0 ID=cds-OFO29328.1;Parent=gene-HMPREF3052_03825;Dbxref=NCBI_GP:OFO29328.1;Name=OFO29328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676674.1;locus_tag=HMPREF3052_03825;product=ligand-gated channel;protein_id=OFO29328.1;transl_table=11 ##sequence-region KV821617.1 1 764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821617.1 Genbank region 1 764 . + . ID=KV821617.1:1..764;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821617.1 Genbank gene 235 756 . + . ID=gene-HMPREF3052_03830;Name=HMPREF3052_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03830 GCA_001815685.1|KV821617.1 Protein Homology CDS 235 756 . + 0 ID=cds-OFO29309.1;Parent=gene-HMPREF3052_03830;Dbxref=NCBI_GP:OFO29309.1;Name=OFO29309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684204.1;locus_tag=HMPREF3052_03830;product=lytic enzyme;protein_id=OFO29309.1;transl_table=11 ##sequence-region KV821618.1 1 61134 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821618.1 Genbank region 1 61134 . + . ID=KV821618.1:1..61134;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821618.1 Genbank gene 262 1158 . - . ID=gene-HMPREF3052_03835;Name=HMPREF3052_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03835 GCA_001815685.1|KV821618.1 Protein Homology CDS 262 1158 . - 0 ID=cds-OFO29228.1;Parent=gene-HMPREF3052_03835;Dbxref=NCBI_GP:OFO29228.1;Name=OFO29228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269957.1;locus_tag=HMPREF3052_03835;product=geranyl transferase;protein_id=OFO29228.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 1142 1369 . - . ID=gene-HMPREF3052_03840;Name=HMPREF3052_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03840 GCA_001815685.1|KV821618.1 Protein Homology CDS 1142 1369 . - 0 ID=cds-OFO29229.1;Parent=gene-HMPREF3052_03840;Dbxref=NCBI_GP:OFO29229.1;Name=OFO29229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681131.1;locus_tag=HMPREF3052_03840;product=exodeoxyribonuclease VII small subunit;protein_id=OFO29229.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 1505 3361 . - . ID=gene-HMPREF3052_03845;Name=HMPREF3052_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03845 GCA_001815685.1|KV821618.1 Protein Homology CDS 1505 3361 . - 0 ID=cds-OFO29230.1;Parent=gene-HMPREF3052_03845;Dbxref=NCBI_GP:OFO29230.1;Name=OFO29230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519175.1;locus_tag=HMPREF3052_03845;product=ribonuclease II;protein_id=OFO29230.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 3470 4390 . - . ID=gene-HMPREF3052_03850;Name=HMPREF3052_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03850 GCA_001815685.1|KV821618.1 Protein Homology CDS 3470 4390 . - 0 ID=cds-OFO29231.1;Parent=gene-HMPREF3052_03850;Dbxref=NCBI_GP:OFO29231.1;Name=OFO29231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686745.1;locus_tag=HMPREF3052_03850;product=esterase;protein_id=OFO29231.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 4490 5107 . - . ID=gene-HMPREF3052_03855;Name=HMPREF3052_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03855 GCA_001815685.1|KV821618.1 Protein Homology CDS 4490 5107 . - 0 ID=cds-OFO29232.1;Parent=gene-HMPREF3052_03855;Dbxref=NCBI_GP:OFO29232.1;Name=OFO29232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003700499.1;locus_tag=HMPREF3052_03855;product=3-hydroxyisobutyrate dehydrogenase;protein_id=OFO29232.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 5260 6126 . + . ID=gene-HMPREF3052_03860;Name=HMPREF3052_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03860 GCA_001815685.1|KV821618.1 Protein Homology CDS 5260 6126 . + 0 ID=cds-OFO29233.1;Parent=gene-HMPREF3052_03860;Dbxref=NCBI_GP:OFO29233.1;Name=OFO29233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686695.1;locus_tag=HMPREF3052_03860;product=ribosome small subunit-dependent GTPase;protein_id=OFO29233.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 6236 6430 . - . ID=gene-HMPREF3052_03865;Name=HMPREF3052_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03865 GCA_001815685.1|KV821618.1 Protein Homology CDS 6236 6430 . - 0 ID=cds-OFO29234.1;Parent=gene-HMPREF3052_03865;Dbxref=NCBI_GP:OFO29234.1;Name=OFO29234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686663.1;locus_tag=HMPREF3052_03865;product=virulence regulator;protein_id=OFO29234.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 6454 8511 . - . ID=gene-HMPREF3052_03870;Name=HMPREF3052_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03870 GCA_001815685.1|KV821618.1 Protein Homology CDS 6454 8511 . - 0 ID=cds-OFO29235.1;Parent=gene-HMPREF3052_03870;Dbxref=NCBI_GP:OFO29235.1;Name=OFO29235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JWP0.1;locus_tag=HMPREF3052_03870;product=methionine--tRNA ligase;protein_id=OFO29235.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 8638 9999 . - . ID=gene-HMPREF3052_03875;Name=HMPREF3052_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03875 GCA_001815685.1|KV821618.1 Protein Homology CDS 8638 9999 . - 0 ID=cds-OFO29236.1;Parent=gene-HMPREF3052_03875;Dbxref=NCBI_GP:OFO29236.1;Name=OFO29236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686518.1;locus_tag=HMPREF3052_03875;product=hypothetical protein;protein_id=OFO29236.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 9996 10697 . - . ID=gene-HMPREF3052_03880;Name=HMPREF3052_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03880 GCA_001815685.1|KV821618.1 Protein Homology CDS 9996 10697 . - 0 ID=cds-OFO29237.1;Parent=gene-HMPREF3052_03880;Dbxref=NCBI_GP:OFO29237.1;Name=OFO29237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686658.1;locus_tag=HMPREF3052_03880;product=hypothetical protein;protein_id=OFO29237.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 10779 11264 . - . ID=gene-HMPREF3052_03885;Name=HMPREF3052_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03885 GCA_001815685.1|KV821618.1 Protein Homology CDS 10779 11264 . - 0 ID=cds-OFO29238.1;Parent=gene-HMPREF3052_03885;Dbxref=NCBI_GP:OFO29238.1;Name=OFO29238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750550.1;locus_tag=HMPREF3052_03885;product=protein-(glutamine-N5) methyltransferase;protein_id=OFO29238.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 11529 12782 . - . ID=gene-HMPREF3052_03890;Name=HMPREF3052_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03890 GCA_001815685.1|KV821618.1 Protein Homology CDS 11529 12782 . - 0 ID=cds-OFO29239.1;Parent=gene-HMPREF3052_03890;Dbxref=NCBI_GP:OFO29239.1;Name=OFO29239.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270755.1;locus_tag=HMPREF3052_03890;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=OFO29239.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 12979 13896 . - . ID=gene-HMPREF3052_03895;Name=HMPREF3052_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03895 GCA_001815685.1|KV821618.1 Protein Homology CDS 12979 13896 . - 0 ID=cds-OFO29240.1;Parent=gene-HMPREF3052_03895;Dbxref=NCBI_GP:OFO29240.1;Name=OFO29240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P95357.1;locus_tag=HMPREF3052_03895;product=cell division protein FtsX;protein_id=OFO29240.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 13893 14543 . - . ID=gene-HMPREF3052_03900;Name=HMPREF3052_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03900 GCA_001815685.1|KV821618.1 Protein Homology CDS 13893 14543 . - 0 ID=cds-OFO29241.1;Parent=gene-HMPREF3052_03900;Dbxref=NCBI_GP:OFO29241.1;Name=OFO29241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242116.1;locus_tag=HMPREF3052_03900;product=cell division ATP-binding protein FtsE;protein_id=OFO29241.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 14792 15274 . - . ID=gene-HMPREF3052_03905;Name=HMPREF3052_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03905 GCA_001815685.1|KV821618.1 Protein Homology CDS 14792 15274 . - 0 ID=cds-OFO29242.1;Parent=gene-HMPREF3052_03905;Dbxref=NCBI_GP:OFO29242.1;Name=OFO29242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686513.1;locus_tag=HMPREF3052_03905;product=thioredoxin;protein_id=OFO29242.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 15444 15803 . + . ID=gene-HMPREF3052_03910;Name=HMPREF3052_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03910 GCA_001815685.1|KV821618.1 Protein Homology CDS 15444 15803 . + 0 ID=cds-OFO29243.1;Parent=gene-HMPREF3052_03910;Dbxref=NCBI_GP:OFO29243.1;Name=OFO29243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519164.1;locus_tag=HMPREF3052_03910;product=arsenate reductase (glutaredoxin);protein_id=OFO29243.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 15829 16485 . + . ID=gene-HMPREF3052_03915;Name=HMPREF3052_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03915 GCA_001815685.1|KV821618.1 Protein Homology CDS 15829 16485 . + 0 ID=cds-OFO29244.1;Parent=gene-HMPREF3052_03915;Dbxref=NCBI_GP:OFO29244.1;Name=OFO29244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686558.1;locus_tag=HMPREF3052_03915;product=multidrug MFS transporter;protein_id=OFO29244.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 16556 16813 . - . ID=gene-HMPREF3052_03920;Name=HMPREF3052_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03920 GCA_001815685.1|KV821618.1 Protein Homology CDS 16556 16813 . - 0 ID=cds-OFO29245.1;Parent=gene-HMPREF3052_03920;Dbxref=NCBI_GP:OFO29245.1;Name=OFO29245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747818.1;locus_tag=HMPREF3052_03920;product=hypothetical protein;protein_id=OFO29245.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 16932 18026 . - . ID=gene-HMPREF3052_03925;Name=HMPREF3052_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03925 GCA_001815685.1|KV821618.1 Protein Homology CDS 16932 18026 . - 0 ID=cds-OFO29246.1;Parent=gene-HMPREF3052_03925;Dbxref=NCBI_GP:OFO29246.1;Name=OFO29246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687106.1;locus_tag=HMPREF3052_03925;product=iron ABC transporter substrate-binding protein;protein_id=OFO29246.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 18190 19584 . + . ID=gene-HMPREF3052_03930;Name=HMPREF3052_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03930 GCA_001815685.1|KV821618.1 Protein Homology CDS 18190 19584 . + 0 ID=cds-OFO29247.1;Parent=gene-HMPREF3052_03930;Dbxref=NCBI_GP:OFO29247.1;Name=OFO29247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743614.1;locus_tag=HMPREF3052_03930;product=glutamate--tRNA ligase;protein_id=OFO29247.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 19665 20621 . - . ID=gene-HMPREF3052_03935;Name=HMPREF3052_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03935 GCA_001815685.1|KV821618.1 Protein Homology CDS 19665 20621 . - 0 ID=cds-OFO29248.1;Parent=gene-HMPREF3052_03935;Dbxref=NCBI_GP:OFO29248.1;Name=OFO29248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519160.1;locus_tag=HMPREF3052_03935;product=hypothetical protein;protein_id=OFO29248.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 21067 21405 . + . ID=gene-HMPREF3052_03940;Name=HMPREF3052_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03940 GCA_001815685.1|KV821618.1 Protein Homology CDS 21067 21405 . + 0 ID=cds-OFO29249.1;Parent=gene-HMPREF3052_03940;Dbxref=NCBI_GP:OFO29249.1;Name=OFO29249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747823.1;locus_tag=HMPREF3052_03940;product=hypothetical protein;protein_id=OFO29249.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 21465 21800 . + . ID=gene-HMPREF3052_03945;Name=HMPREF3052_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03945 GCA_001815685.1|KV821618.1 Protein Homology CDS 21465 21800 . + 0 ID=cds-OFO29250.1;Parent=gene-HMPREF3052_03945;Dbxref=NCBI_GP:OFO29250.1;Name=OFO29250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218469.1;locus_tag=HMPREF3052_03945;product=alkylphosphonate utilization protein;protein_id=OFO29250.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 22017 24326 . + . ID=gene-HMPREF3052_03950;Name=HMPREF3052_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03950 GCA_001815685.1|KV821618.1 Protein Homology CDS 22017 24326 . + 0 ID=cds-OFO29251.1;Parent=gene-HMPREF3052_03950;Dbxref=NCBI_GP:OFO29251.1;Name=OFO29251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747830.1;locus_tag=HMPREF3052_03950;product=ATP-dependent DNA helicase RecQ;protein_id=OFO29251.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 24550 24999 . + . ID=gene-HMPREF3052_03955;Name=HMPREF3052_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03955 GCA_001815685.1|KV821618.1 Protein Homology CDS 24550 24999 . + 0 ID=cds-OFO29252.1;Parent=gene-HMPREF3052_03955;Dbxref=NCBI_GP:OFO29252.1;Name=OFO29252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747831.1;locus_tag=HMPREF3052_03955;product=hypothetical protein;protein_id=OFO29252.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 25083 25400 . + . ID=gene-HMPREF3052_03960;Name=HMPREF3052_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03960 GCA_001815685.1|KV821618.1 Protein Homology CDS 25083 25400 . + 0 ID=cds-OFO29253.1;Parent=gene-HMPREF3052_03960;Dbxref=NCBI_GP:OFO29253.1;Name=OFO29253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688122.1;locus_tag=HMPREF3052_03960;product=hypothetical protein;protein_id=OFO29253.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 25487 26329 . + . ID=gene-HMPREF3052_03965;Name=HMPREF3052_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03965 GCA_001815685.1|KV821618.1 Protein Homology CDS 25487 26329 . + 0 ID=cds-OFO29254.1;Parent=gene-HMPREF3052_03965;Dbxref=NCBI_GP:OFO29254.1;Name=OFO29254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582340.1;locus_tag=HMPREF3052_03965;product=hypothetical protein;protein_id=OFO29254.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 26319 27005 . + . ID=gene-HMPREF3052_03970;Name=HMPREF3052_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03970 GCA_001815685.1|KV821618.1 Protein Homology CDS 26319 27005 . + 0 ID=cds-OFO29255.1;Parent=gene-HMPREF3052_03970;Dbxref=NCBI_GP:OFO29255.1;Name=OFO29255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686698.1;locus_tag=HMPREF3052_03970;product=hypothetical protein;protein_id=OFO29255.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 27147 27725 . + . ID=gene-HMPREF3052_03975;Name=HMPREF3052_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03975 GCA_001815685.1|KV821618.1 Protein Homology CDS 27147 27725 . + 0 ID=cds-OFO29256.1;Parent=gene-HMPREF3052_03975;Dbxref=NCBI_GP:OFO29256.1;Name=OFO29256.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002223225.1;locus_tag=HMPREF3052_03975;product=RNA polymerase subunit sigma;protein_id=OFO29256.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 28149 32297 . - . ID=gene-HMPREF3052_03980;Name=HMPREF3052_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03980 GCA_001815685.1|KV821618.1 Protein Homology CDS 28149 32297 . - 0 ID=cds-OFO29257.1;Parent=gene-HMPREF3052_03980;Dbxref=NCBI_GP:OFO29257.1;Name=OFO29257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686630.1;locus_tag=HMPREF3052_03980;product=hypothetical protein;protein_id=OFO29257.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 32378 34219 . - . ID=gene-HMPREF3052_03985;Name=HMPREF3052_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03985 GCA_001815685.1|KV821618.1 Protein Homology CDS 32378 34219 . - 0 ID=cds-OFO29258.1;Parent=gene-HMPREF3052_03985;Dbxref=NCBI_GP:OFO29258.1;Name=OFO29258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677025.1;locus_tag=HMPREF3052_03985;product=hypothetical protein;protein_id=OFO29258.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 34668 35891 . + . ID=gene-HMPREF3052_03990;Name=HMPREF3052_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03990 GCA_001815685.1|KV821618.1 Protein Homology CDS 34668 35891 . + 0 ID=cds-OFO29259.1;Parent=gene-HMPREF3052_03990;Dbxref=NCBI_GP:OFO29259.1;Name=OFO29259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686565.1;locus_tag=HMPREF3052_03990;product=serine/threonine transporter SstT;protein_id=OFO29259.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 36119 37975 . + . ID=gene-HMPREF3052_03995;Name=HMPREF3052_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_03995 GCA_001815685.1|KV821618.1 Protein Homology CDS 36119 37975 . + 0 ID=cds-OFO29260.1;Parent=gene-HMPREF3052_03995;Dbxref=NCBI_GP:OFO29260.1;Name=OFO29260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681656.1;locus_tag=HMPREF3052_03995;product=multidrug ABC transporter ATP-binding protein;protein_id=OFO29260.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 38212 38940 . - . ID=gene-HMPREF3052_04000;Name=HMPREF3052_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04000 GCA_001815685.1|KV821618.1 Protein Homology CDS 38212 38940 . - 0 ID=cds-OFO29168.1;Parent=gene-HMPREF3052_04000;Dbxref=NCBI_GP:OFO29168.1;Name=OFO29168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686578.1;locus_tag=HMPREF3052_04000;product=Rossman fold protein%2C TIGR00730 family;protein_id=OFO29168.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 39082 39798 . + . ID=gene-HMPREF3052_04005;Name=HMPREF3052_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04005 GCA_001815685.1|KV821618.1 Protein Homology CDS 39082 39798 . + 0 ID=cds-OFO29190.1;Parent=gene-HMPREF3052_04005;Dbxref=NCBI_GP:OFO29190.1;Name=OFO29190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681664.1;locus_tag=HMPREF3052_04005;product=tRNA pseudouridine(65) synthase TruC;protein_id=OFO29190.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 39896 40999 . + . ID=gene-HMPREF3052_04010;Name=HMPREF3052_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04010 GCA_001815685.1|KV821618.1 Protein Homology CDS 39896 40999 . + 0 ID=cds-OFO29169.1;Parent=gene-HMPREF3052_04010;Dbxref=NCBI_GP:OFO29169.1;Name=OFO29169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449647.1;locus_tag=HMPREF3052_04010;product=peptide chain release factor 2;protein_id=OFO29169.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 41705 43162 . + . ID=gene-HMPREF3052_04015;Name=HMPREF3052_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04015 GCA_001815685.1|KV821618.1 Protein Homology CDS 41705 43162 . + 0 ID=cds-OFO29170.1;Parent=gene-HMPREF3052_04015;Dbxref=NCBI_GP:OFO29170.1;Name=OFO29170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747865.1;locus_tag=HMPREF3052_04015;product=MFS transporter;protein_id=OFO29170.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 43499 43855 . + . ID=gene-HMPREF3052_04020;Name=HMPREF3052_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04020 GCA_001815685.1|KV821618.1 Protein Homology CDS 43499 43855 . + 0 ID=cds-OFO29171.1;Parent=gene-HMPREF3052_04020;Dbxref=NCBI_GP:OFO29171.1;Name=OFO29171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642681.1;locus_tag=HMPREF3052_04020;product=NADH-quinone oxidoreductase subunit A;protein_id=OFO29171.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 43846 44328 . + . ID=gene-HMPREF3052_04025;Name=HMPREF3052_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04025 GCA_001815685.1|KV821618.1 Protein Homology CDS 43846 44328 . + 0 ID=cds-OFO29172.1;Parent=gene-HMPREF3052_04025;Dbxref=NCBI_GP:OFO29172.1;Name=OFO29172.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F616.1;locus_tag=HMPREF3052_04025;product=NADH dehydrogenase;protein_id=OFO29172.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 44341 44934 . + . ID=gene-HMPREF3052_04030;Name=HMPREF3052_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04030 GCA_001815685.1|KV821618.1 Protein Homology CDS 44341 44934 . + 0 ID=cds-OFO29173.1;Parent=gene-HMPREF3052_04030;Dbxref=NCBI_GP:OFO29173.1;Name=OFO29173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239488.1;locus_tag=HMPREF3052_04030;product=NADH dehydrogenase;protein_id=OFO29173.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 44924 46180 . + . ID=gene-HMPREF3052_04035;Name=HMPREF3052_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04035 GCA_001815685.1|KV821618.1 Protein Homology CDS 44924 46180 . + 0 ID=cds-OFO29174.1;Parent=gene-HMPREF3052_04035;Dbxref=NCBI_GP:OFO29174.1;Name=OFO29174.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573729.1;locus_tag=HMPREF3052_04035;product=NADH dehydrogenase;protein_id=OFO29174.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 46180 46653 . + . ID=gene-HMPREF3052_04040;Name=HMPREF3052_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04040 GCA_001815685.1|KV821618.1 Protein Homology CDS 46180 46653 . + 0 ID=cds-OFO29175.1;Parent=gene-HMPREF3052_04040;Dbxref=NCBI_GP:OFO29175.1;Name=OFO29175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215615.1;locus_tag=HMPREF3052_04040;product=NADH dehydrogenase;protein_id=OFO29175.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 46749 47333 . + . ID=gene-HMPREF3052_04045;Name=HMPREF3052_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04045 GCA_001815685.1|KV821618.1 Protein Homology CDS 46749 47333 . + 0 ID=cds-OFO29176.1;Parent=gene-HMPREF3052_04045;Dbxref=NCBI_GP:OFO29176.1;Name=OFO29176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272034.1;locus_tag=HMPREF3052_04045;product=DNA-binding protein;protein_id=OFO29176.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 47511 48806 . + . ID=gene-HMPREF3052_04050;Name=HMPREF3052_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04050 GCA_001815685.1|KV821618.1 Protein Homology CDS 47511 48806 . + 0 ID=cds-OFO29177.1;Parent=gene-HMPREF3052_04050;Dbxref=NCBI_GP:OFO29177.1;Name=OFO29177.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822945.1;locus_tag=HMPREF3052_04050;product=NADH-quinone oxidoreductase subunit F;protein_id=OFO29177.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 48865 51126 . + . ID=gene-HMPREF3052_04055;Name=HMPREF3052_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04055 GCA_001815685.1|KV821618.1 Protein Homology CDS 48865 51126 . + 0 ID=cds-OFO29178.1;Parent=gene-HMPREF3052_04055;Dbxref=NCBI_GP:OFO29178.1;Name=OFO29178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776117.1;locus_tag=HMPREF3052_04055;product=NADH dehydrogenase;protein_id=OFO29178.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 51129 52205 . + . ID=gene-HMPREF3052_04060;Name=HMPREF3052_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04060 GCA_001815685.1|KV821618.1 Protein Homology CDS 51129 52205 . + 0 ID=cds-OFO29179.1;Parent=gene-HMPREF3052_04060;Dbxref=NCBI_GP:OFO29179.1;Name=OFO29179.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272039.1;locus_tag=HMPREF3052_04060;product=NADH:ubiquinone oxidoreductase subunit H;protein_id=OFO29179.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 52281 52676 . + . ID=gene-HMPREF3052_04065;Name=HMPREF3052_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04065 GCA_001815685.1|KV821618.1 Protein Homology CDS 52281 52676 . + 0 ID=cds-OFO29180.1;Parent=gene-HMPREF3052_04065;Dbxref=NCBI_GP:OFO29180.1;Name=OFO29180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686531.1;locus_tag=HMPREF3052_04065;product=aldehyde-activating protein;protein_id=OFO29180.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 52731 53210 . + . ID=gene-HMPREF3052_04070;Name=HMPREF3052_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04070 GCA_001815685.1|KV821618.1 Protein Homology CDS 52731 53210 . + 0 ID=cds-OFO29181.1;Parent=gene-HMPREF3052_04070;Dbxref=NCBI_GP:OFO29181.1;Name=OFO29181.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F623.1;locus_tag=HMPREF3052_04070;product=NADH-quinone oxidoreductase subunit I;protein_id=OFO29181.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 53222 53893 . + . ID=gene-HMPREF3052_04075;Name=HMPREF3052_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04075 GCA_001815685.1|KV821618.1 Protein Homology CDS 53222 53893 . + 0 ID=cds-OFO29182.1;Parent=gene-HMPREF3052_04075;Dbxref=NCBI_GP:OFO29182.1;Name=OFO29182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750564.1;locus_tag=HMPREF3052_04075;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=OFO29182.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 53890 54195 . + . ID=gene-HMPREF3052_04080;Name=HMPREF3052_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04080 GCA_001815685.1|KV821618.1 Protein Homology CDS 53890 54195 . + 0 ID=cds-OFO29183.1;Parent=gene-HMPREF3052_04080;Dbxref=NCBI_GP:OFO29183.1;Name=OFO29183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003787972.1;locus_tag=HMPREF3052_04080;product=NADH-quinone oxidoreductase subunit K;protein_id=OFO29183.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 54198 56222 . + . ID=gene-HMPREF3052_04085;Name=HMPREF3052_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04085 GCA_001815685.1|KV821618.1 Protein Homology CDS 54198 56222 . + 0 ID=cds-OFO29184.1;Parent=gene-HMPREF3052_04085;Dbxref=NCBI_GP:OFO29184.1;Name=OFO29184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573734.1;locus_tag=HMPREF3052_04085;product=NADH-quinone oxidoreductase subunit L;protein_id=OFO29184.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 56318 57814 . + . ID=gene-HMPREF3052_04090;Name=HMPREF3052_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04090 GCA_001815685.1|KV821618.1 Protein Homology CDS 56318 57814 . + 0 ID=cds-OFO29185.1;Parent=gene-HMPREF3052_04090;Dbxref=NCBI_GP:OFO29185.1;Name=OFO29185.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449632.1;locus_tag=HMPREF3052_04090;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=OFO29185.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 57824 59266 . + . ID=gene-HMPREF3052_04095;Name=HMPREF3052_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04095 GCA_001815685.1|KV821618.1 Protein Homology CDS 57824 59266 . + 0 ID=cds-OFO29186.1;Parent=gene-HMPREF3052_04095;Dbxref=NCBI_GP:OFO29186.1;Name=OFO29186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681689.1;locus_tag=HMPREF3052_04095;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=OFO29186.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 59487 59786 . + . ID=gene-HMPREF3052_04100;Name=HMPREF3052_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04100 GCA_001815685.1|KV821618.1 Protein Homology CDS 59487 59786 . + 0 ID=cds-OFO29187.1;Parent=gene-HMPREF3052_04100;Dbxref=NCBI_GP:OFO29187.1;Name=OFO29187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002259571.1;locus_tag=HMPREF3052_04100;product=hypothetical protein;protein_id=OFO29187.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 59796 60023 . + . ID=gene-HMPREF3052_04105;Name=HMPREF3052_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04105 GCA_001815685.1|KV821618.1 GeneMarkS+ CDS 59796 60023 . + 0 ID=cds-OFO29188.1;Parent=gene-HMPREF3052_04105;Dbxref=NCBI_GP:OFO29188.1;Name=OFO29188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04105;product=hypothetical protein;protein_id=OFO29188.1;transl_table=11 GCA_001815685.1|KV821618.1 Genbank gene 60102 60731 . - . ID=gene-HMPREF3052_04110;Name=HMPREF3052_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04110 GCA_001815685.1|KV821618.1 Protein Homology CDS 60102 60731 . - 0 ID=cds-OFO29189.1;Parent=gene-HMPREF3052_04110;Dbxref=NCBI_GP:OFO29189.1;Name=OFO29189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686681.1;locus_tag=HMPREF3052_04110;product=hypothetical protein;protein_id=OFO29189.1;transl_table=11 ##sequence-region KV821619.1 1 3836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821619.1 Genbank region 1 3836 . + . ID=KV821619.1:1..3836;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821619.1 Genbank pseudogene 1 1917 . - . ID=gene-HMPREF3052_04115;Name=HMPREF3052_04115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_04115;pseudo=true GCA_001815685.1|KV821619.1 GeneMarkS+ CDS 1 1917 . - 0 ID=cds-HMPREF3052_04115;Parent=gene-HMPREF3052_04115;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04115;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821619.1 Genbank gene 2254 3789 . - . ID=gene-HMPREF3052_04120;Name=HMPREF3052_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04120 GCA_001815685.1|KV821619.1 GeneMarkS+ CDS 2254 3789 . - 0 ID=cds-OFO29150.1;Parent=gene-HMPREF3052_04120;Dbxref=NCBI_GP:OFO29150.1;Name=OFO29150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04120;product=hypothetical protein;protein_id=OFO29150.1;transl_table=11 ##sequence-region KV821620.1 1 145934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821620.1 Genbank region 1 145934 . + . ID=KV821620.1:1..145934;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821620.1 Genbank gene 181 1632 . - . ID=gene-HMPREF3052_04125;Name=HMPREF3052_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04125 GCA_001815685.1|KV821620.1 Protein Homology CDS 181 1632 . - 0 ID=cds-OFO29085.1;Parent=gene-HMPREF3052_04125;Dbxref=NCBI_GP:OFO29085.1;Name=OFO29085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582118.1;locus_tag=HMPREF3052_04125;product=(Fe-S)-binding protein;protein_id=OFO29085.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 1629 2330 . - . ID=gene-HMPREF3052_04130;Name=HMPREF3052_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04130 GCA_001815685.1|KV821620.1 Protein Homology CDS 1629 2330 . - 0 ID=cds-OFO29086.1;Parent=gene-HMPREF3052_04130;Dbxref=NCBI_GP:OFO29086.1;Name=OFO29086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JYT7.1;locus_tag=HMPREF3052_04130;product=hypothetical protein;protein_id=OFO29086.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 2327 3106 . - . ID=gene-HMPREF3052_04135;Name=HMPREF3052_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04135 GCA_001815685.1|KV821620.1 Protein Homology CDS 2327 3106 . - 0 ID=cds-OFO29087.1;Parent=gene-HMPREF3052_04135;Dbxref=NCBI_GP:OFO29087.1;Name=OFO29087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271230.1;locus_tag=HMPREF3052_04135;product=oxidoreductase;protein_id=OFO29087.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank pseudogene 3775 5683 . + . ID=gene-HMPREF3052_04140;Name=HMPREF3052_04140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_04140;pseudo=true GCA_001815685.1|KV821620.1 Protein Homology CDS 3775 5683 . + 0 ID=cds-HMPREF3052_04140;Parent=gene-HMPREF3052_04140;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688094.1;locus_tag=HMPREF3052_04140;product=amylosucrase;pseudo=true;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 5837 6661 . + . ID=gene-HMPREF3052_04145;Name=HMPREF3052_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04145 GCA_001815685.1|KV821620.1 Protein Homology CDS 5837 6661 . + 0 ID=cds-OFO29088.1;Parent=gene-HMPREF3052_04145;Dbxref=NCBI_GP:OFO29088.1;Name=OFO29088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173727.1;locus_tag=HMPREF3052_04145;product=amino acid ABC transporter substrate-binding protein;protein_id=OFO29088.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 6684 7367 . + . ID=gene-HMPREF3052_04150;Name=HMPREF3052_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04150 GCA_001815685.1|KV821620.1 Protein Homology CDS 6684 7367 . + 0 ID=cds-OFO29149.1;Parent=gene-HMPREF3052_04150;Dbxref=NCBI_GP:OFO29149.1;Name=OFO29149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815406.1;locus_tag=HMPREF3052_04150;product=cysteine ABC transporter permease;protein_id=OFO29149.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 7377 8144 . + . ID=gene-HMPREF3052_04155;Name=HMPREF3052_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04155 GCA_001815685.1|KV821620.1 Protein Homology CDS 7377 8144 . + 0 ID=cds-OFO29089.1;Parent=gene-HMPREF3052_04155;Dbxref=NCBI_GP:OFO29089.1;Name=OFO29089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679209.1;locus_tag=HMPREF3052_04155;product=polar amino acid ABC transporter ATP-binding protein;protein_id=OFO29089.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 8316 10235 . + . ID=gene-HMPREF3052_04160;Name=HMPREF3052_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04160 GCA_001815685.1|KV821620.1 Protein Homology CDS 8316 10235 . + 0 ID=cds-OFO29090.1;Parent=gene-HMPREF3052_04160;Dbxref=NCBI_GP:OFO29090.1;Name=OFO29090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273308.1;locus_tag=HMPREF3052_04160;product=ABC transporter;protein_id=OFO29090.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 10283 10636 . + . ID=gene-HMPREF3052_04165;Name=HMPREF3052_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04165 GCA_001815685.1|KV821620.1 Protein Homology CDS 10283 10636 . + 0 ID=cds-OFO29091.1;Parent=gene-HMPREF3052_04165;Dbxref=NCBI_GP:OFO29091.1;Name=OFO29091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683625.1;locus_tag=HMPREF3052_04165;product=nucleolar protein;protein_id=OFO29091.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 10673 11224 . + . ID=gene-HMPREF3052_04170;Name=HMPREF3052_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04170 GCA_001815685.1|KV821620.1 Protein Homology CDS 10673 11224 . + 0 ID=cds-OFO29092.1;Parent=gene-HMPREF3052_04170;Dbxref=NCBI_GP:OFO29092.1;Name=OFO29092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679204.1;locus_tag=HMPREF3052_04170;product=hypothetical protein;protein_id=OFO29092.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 11413 13857 . + . ID=gene-HMPREF3052_04175;Name=HMPREF3052_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04175 GCA_001815685.1|KV821620.1 Protein Homology CDS 11413 13857 . + 0 ID=cds-OFO29093.1;Parent=gene-HMPREF3052_04175;Dbxref=NCBI_GP:OFO29093.1;Name=OFO29093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679202.1;locus_tag=HMPREF3052_04175;product=cell division protein FtsK;protein_id=OFO29093.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 14050 15360 . + . ID=gene-HMPREF3052_04180;Name=HMPREF3052_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04180 GCA_001815685.1|KV821620.1 Protein Homology CDS 14050 15360 . + 0 ID=cds-OFO29094.1;Parent=gene-HMPREF3052_04180;Dbxref=NCBI_GP:OFO29094.1;Name=OFO29094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742150.1;locus_tag=HMPREF3052_04180;product=trigger factor;protein_id=OFO29094.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 15451 16071 . + . ID=gene-HMPREF3052_04185;Name=HMPREF3052_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04185 GCA_001815685.1|KV821620.1 Protein Homology CDS 15451 16071 . + 0 ID=cds-OFO29095.1;Parent=gene-HMPREF3052_04185;Dbxref=NCBI_GP:OFO29095.1;Name=OFO29095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520606.1;locus_tag=HMPREF3052_04185;product=ATP-dependent Clp protease proteolytic subunit;protein_id=OFO29095.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 16138 18126 . - . ID=gene-HMPREF3052_04190;Name=HMPREF3052_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04190 GCA_001815685.1|KV821620.1 Protein Homology CDS 16138 18126 . - 0 ID=cds-OFO29096.1;Parent=gene-HMPREF3052_04190;Dbxref=NCBI_GP:OFO29096.1;Name=OFO29096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683466.1;locus_tag=HMPREF3052_04190;product=recombinase;protein_id=OFO29096.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 18356 20929 . - . ID=gene-HMPREF3052_04195;Name=HMPREF3052_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04195 GCA_001815685.1|KV821620.1 Protein Homology CDS 18356 20929 . - 0 ID=cds-OFO29097.1;Parent=gene-HMPREF3052_04195;Dbxref=NCBI_GP:OFO29097.1;Name=OFO29097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766015.1;locus_tag=HMPREF3052_04195;product=ATP-dependent chaperone ClpB;protein_id=OFO29097.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 21188 22198 . + . ID=gene-HMPREF3052_04200;Name=HMPREF3052_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04200 GCA_001815685.1|KV821620.1 Protein Homology CDS 21188 22198 . + 0 ID=cds-OFO29098.1;Parent=gene-HMPREF3052_04200;Dbxref=NCBI_GP:OFO29098.1;Name=OFO29098.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520609.1;locus_tag=HMPREF3052_04200;product=tryptophan--tRNA ligase;protein_id=OFO29098.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 22279 22818 . + . ID=gene-HMPREF3052_04205;Name=HMPREF3052_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04205 GCA_001815685.1|KV821620.1 Protein Homology CDS 22279 22818 . + 0 ID=cds-OFO29099.1;Parent=gene-HMPREF3052_04205;Dbxref=NCBI_GP:OFO29099.1;Name=OFO29099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679195.1;locus_tag=HMPREF3052_04205;product=hypothetical protein;protein_id=OFO29099.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 22862 23356 . + . ID=gene-HMPREF3052_04210;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=HMPREF3052_04210 GCA_001815685.1|KV821620.1 Protein Homology CDS 22862 23356 . + 0 ID=cds-OFO29100.1;Parent=gene-HMPREF3052_04210;Dbxref=NCBI_GP:OFO29100.1;Name=OFO29100.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679194.1;locus_tag=HMPREF3052_04210;product=2-Cys peroxiredoxin;protein_id=OFO29100.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 23460 25421 . - . ID=gene-HMPREF3052_04215;Name=HMPREF3052_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04215 GCA_001815685.1|KV821620.1 Protein Homology CDS 23460 25421 . - 0 ID=cds-OFO29101.1;Parent=gene-HMPREF3052_04215;Dbxref=NCBI_GP:OFO29101.1;Name=OFO29101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683581.1;locus_tag=HMPREF3052_04215;product=cell division protein FtsH;protein_id=OFO29101.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 25492 26112 . - . ID=gene-HMPREF3052_04220;Name=HMPREF3052_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04220 GCA_001815685.1|KV821620.1 Protein Homology CDS 25492 26112 . - 0 ID=cds-OFO29102.1;Parent=gene-HMPREF3052_04220;Dbxref=NCBI_GP:OFO29102.1;Name=OFO29102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688282.1;locus_tag=HMPREF3052_04220;product=23S rRNA methyltransferase;protein_id=OFO29102.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 26224 26511 . + . ID=gene-HMPREF3052_04225;Name=HMPREF3052_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04225 GCA_001815685.1|KV821620.1 Protein Homology CDS 26224 26511 . + 0 ID=cds-OFO29103.1;Parent=gene-HMPREF3052_04225;Dbxref=NCBI_GP:OFO29103.1;Name=OFO29103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683311.1;locus_tag=HMPREF3052_04225;product=ribosome assembly protein YhbY;protein_id=OFO29103.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 26736 28163 . + . ID=gene-HMPREF3052_04230;Name=HMPREF3052_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04230 GCA_001815685.1|KV821620.1 Protein Homology CDS 26736 28163 . + 0 ID=cds-OFO29104.1;Parent=gene-HMPREF3052_04230;Dbxref=NCBI_GP:OFO29104.1;Name=OFO29104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683664.1;locus_tag=HMPREF3052_04230;product=hypothetical protein;protein_id=OFO29104.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 28754 31417 . + . ID=gene-HMPREF3052_04235;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=HMPREF3052_04235 GCA_001815685.1|KV821620.1 Protein Homology CDS 28754 31417 . + 0 ID=cds-OFO29105.1;Parent=gene-HMPREF3052_04235;Dbxref=NCBI_GP:OFO29105.1;Name=OFO29105.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173178.1;locus_tag=HMPREF3052_04235;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=OFO29105.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 31562 33172 . + . ID=gene-HMPREF3052_04240;Name=HMPREF3052_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04240 GCA_001815685.1|KV821620.1 Protein Homology CDS 31562 33172 . + 0 ID=cds-OFO29106.1;Parent=gene-HMPREF3052_04240;Dbxref=NCBI_GP:OFO29106.1;Name=OFO29106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679167.1;locus_tag=HMPREF3052_04240;product=dihydrolipoamide acetyltransferase;protein_id=OFO29106.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 33251 35032 . + . ID=gene-HMPREF3052_04245;Name=HMPREF3052_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04245 GCA_001815685.1|KV821620.1 Protein Homology CDS 33251 35032 . + 0 ID=cds-OFO29107.1;Parent=gene-HMPREF3052_04245;Dbxref=NCBI_GP:OFO29107.1;Name=OFO29107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272436.1;locus_tag=HMPREF3052_04245;product=dihydrolipoamide dehydrogenase;protein_id=OFO29107.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 35122 35460 . + . ID=gene-HMPREF3052_04250;Name=HMPREF3052_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04250 GCA_001815685.1|KV821620.1 Protein Homology CDS 35122 35460 . + 0 ID=cds-OFO29108.1;Parent=gene-HMPREF3052_04250;Dbxref=NCBI_GP:OFO29108.1;Name=OFO29108.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771425.1;locus_tag=HMPREF3052_04250;product=transcriptional regulator;protein_id=OFO29108.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 35956 36642 . + . ID=gene-HMPREF3052_04255;Name=HMPREF3052_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04255 GCA_001815685.1|KV821620.1 GeneMarkS+ CDS 35956 36642 . + 0 ID=cds-OFO29109.1;Parent=gene-HMPREF3052_04255;Dbxref=NCBI_GP:OFO29109.1;Name=OFO29109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04255;product=hypothetical protein;protein_id=OFO29109.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 36717 37835 . + . ID=gene-HMPREF3052_04260;Name=HMPREF3052_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04260 GCA_001815685.1|KV821620.1 GeneMarkS+ CDS 36717 37835 . + 0 ID=cds-OFO29110.1;Parent=gene-HMPREF3052_04260;Dbxref=NCBI_GP:OFO29110.1;Name=OFO29110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04260;product=hypothetical protein;protein_id=OFO29110.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 37806 38129 . - . ID=gene-HMPREF3052_04265;Name=HMPREF3052_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04265 GCA_001815685.1|KV821620.1 GeneMarkS+ CDS 37806 38129 . - 0 ID=cds-OFO29111.1;Parent=gene-HMPREF3052_04265;Dbxref=NCBI_GP:OFO29111.1;Name=OFO29111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04265;product=hypothetical protein;protein_id=OFO29111.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 38170 38370 . + . ID=gene-HMPREF3052_04270;Name=HMPREF3052_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04270 GCA_001815685.1|KV821620.1 GeneMarkS+ CDS 38170 38370 . + 0 ID=cds-OFO29112.1;Parent=gene-HMPREF3052_04270;Dbxref=NCBI_GP:OFO29112.1;Name=OFO29112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04270;product=hypothetical protein;protein_id=OFO29112.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 38507 39883 . + . ID=gene-HMPREF3052_04275;Name=HMPREF3052_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04275 GCA_001815685.1|KV821620.1 Protein Homology CDS 38507 39883 . + 0 ID=cds-OFO29113.1;Parent=gene-HMPREF3052_04275;Dbxref=NCBI_GP:OFO29113.1;Name=OFO29113.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687526.1;locus_tag=HMPREF3052_04275;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=OFO29113.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 40146 40586 . - . ID=gene-HMPREF3052_04280;Name=HMPREF3052_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04280 GCA_001815685.1|KV821620.1 Protein Homology CDS 40146 40586 . - 0 ID=cds-OFO29114.1;Parent=gene-HMPREF3052_04280;Dbxref=NCBI_GP:OFO29114.1;Name=OFO29114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765348.1;locus_tag=HMPREF3052_04280;product=Sterol-binding domain protein;protein_id=OFO29114.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 40573 41490 . - . ID=gene-HMPREF3052_04285;Name=HMPREF3052_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04285 GCA_001815685.1|KV821620.1 Protein Homology CDS 40573 41490 . - 0 ID=cds-OFO29115.1;Parent=gene-HMPREF3052_04285;Dbxref=NCBI_GP:OFO29115.1;Name=OFO29115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784547.1;locus_tag=HMPREF3052_04285;product=U32 family peptidase;protein_id=OFO29115.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 41504 42511 . - . ID=gene-HMPREF3052_04290;Name=HMPREF3052_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04290 GCA_001815685.1|KV821620.1 Protein Homology CDS 41504 42511 . - 0 ID=cds-OFO29116.1;Parent=gene-HMPREF3052_04290;Dbxref=NCBI_GP:OFO29116.1;Name=OFO29116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269965.1;locus_tag=HMPREF3052_04290;product=protease;protein_id=OFO29116.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 42967 43620 . + . ID=gene-HMPREF3052_04295;Name=HMPREF3052_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04295 GCA_001815685.1|KV821620.1 Protein Homology CDS 42967 43620 . + 0 ID=cds-OFO29117.1;Parent=gene-HMPREF3052_04295;Dbxref=NCBI_GP:OFO29117.1;Name=OFO29117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757490.1;locus_tag=HMPREF3052_04295;product=NADH:ubiquinone oxidoreductase%2C Na;protein_id=OFO29117.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank pseudogene 43846 44451 . + . ID=gene-HMPREF3052_04300;Name=HMPREF3052_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_04300;pseudo=true GCA_001815685.1|KV821620.1 Protein Homology CDS 43846 44451 . + 0 ID=cds-HMPREF3052_04300;Parent=gene-HMPREF3052_04300;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767997.1;locus_tag=HMPREF3052_04300;product=serine/threonine protein phosphatase;pseudo=true;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 44697 46565 . - . ID=gene-HMPREF3052_04305;Name=HMPREF3052_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04305 GCA_001815685.1|KV821620.1 Protein Homology CDS 44697 46565 . - 0 ID=cds-OFO29118.1;Parent=gene-HMPREF3052_04305;Dbxref=NCBI_GP:OFO29118.1;Name=OFO29118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271280.1;locus_tag=HMPREF3052_04305;product=ferrous iron transporter B;protein_id=OFO29118.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 46593 46862 . - . ID=gene-HMPREF3052_04310;Name=HMPREF3052_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04310 GCA_001815685.1|KV821620.1 Protein Homology CDS 46593 46862 . - 0 ID=cds-OFO29119.1;Parent=gene-HMPREF3052_04310;Dbxref=NCBI_GP:OFO29119.1;Name=OFO29119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746882.1;locus_tag=HMPREF3052_04310;product=iron transporter;protein_id=OFO29119.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 47209 47478 . - . ID=gene-HMPREF3052_04315;Name=HMPREF3052_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04315 GCA_001815685.1|KV821620.1 Protein Homology CDS 47209 47478 . - 0 ID=cds-OFO29120.1;Parent=gene-HMPREF3052_04315;Dbxref=NCBI_GP:OFO29120.1;Name=OFO29120.1;Note=histone-like DNA-binding protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342959.1;locus_tag=HMPREF3052_04315;product=DNA-binding protein HU;protein_id=OFO29120.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 47664 50123 . - . ID=gene-HMPREF3052_04320;Name=HMPREF3052_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04320 GCA_001815685.1|KV821620.1 Protein Homology CDS 47664 50123 . - 0 ID=cds-OFO29121.1;Parent=gene-HMPREF3052_04320;Dbxref=NCBI_GP:OFO29121.1;Name=OFO29121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233897.1;locus_tag=HMPREF3052_04320;product=endopeptidase La;protein_id=OFO29121.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 50340 50615 . + . ID=gene-HMPREF3052_04325;Name=HMPREF3052_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04325 GCA_001815685.1|KV821620.1 Protein Homology CDS 50340 50615 . + 0 ID=cds-OFO29122.1;Parent=gene-HMPREF3052_04325;Dbxref=NCBI_GP:OFO29122.1;Name=OFO29122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675413.1;locus_tag=HMPREF3052_04325;product=hypothetical protein;protein_id=OFO29122.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 50615 51217 . + . ID=gene-HMPREF3052_04330;Name=HMPREF3052_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04330 GCA_001815685.1|KV821620.1 Protein Homology CDS 50615 51217 . + 0 ID=cds-OFO29123.1;Parent=gene-HMPREF3052_04330;Dbxref=NCBI_GP:OFO29123.1;Name=OFO29123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746892.1;locus_tag=HMPREF3052_04330;product=octanoyltransferase;protein_id=OFO29123.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 51347 52330 . + . ID=gene-HMPREF3052_04335;Name=HMPREF3052_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04335 GCA_001815685.1|KV821620.1 Protein Homology CDS 51347 52330 . + 0 ID=cds-OFO29124.1;Parent=gene-HMPREF3052_04335;Dbxref=NCBI_GP:OFO29124.1;Name=OFO29124.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239803.1;locus_tag=HMPREF3052_04335;product=lipoyl synthase;protein_id=OFO29124.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 52534 53535 . - . ID=gene-HMPREF3052_04340;Name=HMPREF3052_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04340 GCA_001815685.1|KV821620.1 Protein Homology CDS 52534 53535 . - 0 ID=cds-OFO29125.1;Parent=gene-HMPREF3052_04340;Dbxref=NCBI_GP:OFO29125.1;Name=OFO29125.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271236.1;locus_tag=HMPREF3052_04340;product=delta-aminolevulinic acid dehydratase;protein_id=OFO29125.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 53568 54278 . - . ID=gene-HMPREF3052_04345;Name=HMPREF3052_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04345 GCA_001815685.1|KV821620.1 Protein Homology CDS 53568 54278 . - 0 ID=cds-OFO29126.1;Parent=gene-HMPREF3052_04345;Dbxref=NCBI_GP:OFO29126.1;Name=OFO29126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679122.1;locus_tag=HMPREF3052_04345;product=hypothetical protein;protein_id=OFO29126.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 54439 55311 . - . ID=gene-HMPREF3052_04350;Name=HMPREF3052_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04350 GCA_001815685.1|KV821620.1 Protein Homology CDS 54439 55311 . - 0 ID=cds-OFO29127.1;Parent=gene-HMPREF3052_04350;Dbxref=NCBI_GP:OFO29127.1;Name=OFO29127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003751426.1;locus_tag=HMPREF3052_04350;product=hypothetical protein;protein_id=OFO29127.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 55315 55902 . - . ID=gene-HMPREF3052_04355;Name=HMPREF3052_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04355 GCA_001815685.1|KV821620.1 Protein Homology CDS 55315 55902 . - 0 ID=cds-OFO29128.1;Parent=gene-HMPREF3052_04355;Dbxref=NCBI_GP:OFO29128.1;Name=OFO29128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519715.1;locus_tag=HMPREF3052_04355;product=molecular chaperone DnaJ;protein_id=OFO29128.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 55918 56403 . - . ID=gene-HMPREF3052_04360;Name=HMPREF3052_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04360 GCA_001815685.1|KV821620.1 Protein Homology CDS 55918 56403 . - 0 ID=cds-OFO29129.1;Parent=gene-HMPREF3052_04360;Dbxref=NCBI_GP:OFO29129.1;Name=OFO29129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519716.1;locus_tag=HMPREF3052_04360;product=aminoacyl-tRNA deacylase;protein_id=OFO29129.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 56503 56856 . + . ID=gene-HMPREF3052_04365;Name=HMPREF3052_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04365 GCA_001815685.1|KV821620.1 Protein Homology CDS 56503 56856 . + 0 ID=cds-OFO29130.1;Parent=gene-HMPREF3052_04365;Dbxref=NCBI_GP:OFO29130.1;Name=OFO29130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519717.1;locus_tag=HMPREF3052_04365;product=hypothetical protein;protein_id=OFO29130.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 56985 57944 . + . ID=gene-HMPREF3052_04370;Name=HMPREF3052_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04370 GCA_001815685.1|KV821620.1 Protein Homology CDS 56985 57944 . + 0 ID=cds-OFO29131.1;Parent=gene-HMPREF3052_04370;Dbxref=NCBI_GP:OFO29131.1;Name=OFO29131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239108.1;locus_tag=HMPREF3052_04370;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=OFO29131.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 58104 58592 . + . ID=gene-HMPREF3052_04375;Name=HMPREF3052_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04375 GCA_001815685.1|KV821620.1 Protein Homology CDS 58104 58592 . + 0 ID=cds-OFO29132.1;Parent=gene-HMPREF3052_04375;Dbxref=NCBI_GP:OFO29132.1;Name=OFO29132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746916.1;locus_tag=HMPREF3052_04375;product=hypothetical protein;protein_id=OFO29132.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 58654 59313 . - . ID=gene-HMPREF3052_04380;Name=HMPREF3052_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04380 GCA_001815685.1|KV821620.1 Protein Homology CDS 58654 59313 . - 0 ID=cds-OFO29133.1;Parent=gene-HMPREF3052_04380;Dbxref=NCBI_GP:OFO29133.1;Name=OFO29133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746917.1;locus_tag=HMPREF3052_04380;product=hypothetical protein;protein_id=OFO29133.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 59357 60139 . - . ID=gene-HMPREF3052_04385;Name=HMPREF3052_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04385 GCA_001815685.1|KV821620.1 Protein Homology CDS 59357 60139 . - 0 ID=cds-OFO29134.1;Parent=gene-HMPREF3052_04385;Dbxref=NCBI_GP:OFO29134.1;Name=OFO29134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679103.1;locus_tag=HMPREF3052_04385;product=RNA methyltransferase;protein_id=OFO29134.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 60258 60806 . - . ID=gene-HMPREF3052_04390;Name=HMPREF3052_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04390 GCA_001815685.1|KV821620.1 Protein Homology CDS 60258 60806 . - 0 ID=cds-OFO29135.1;Parent=gene-HMPREF3052_04390;Dbxref=NCBI_GP:OFO29135.1;Name=OFO29135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746920.1;locus_tag=HMPREF3052_04390;product=antirepressor;protein_id=OFO29135.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 60812 61411 . - . ID=gene-HMPREF3052_04395;Name=HMPREF3052_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04395 GCA_001815685.1|KV821620.1 Protein Homology CDS 60812 61411 . - 0 ID=cds-OFO29136.1;Parent=gene-HMPREF3052_04395;Dbxref=NCBI_GP:OFO29136.1;Name=OFO29136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008953842.1;locus_tag=HMPREF3052_04395;product=RNA polymerase sigma factor RpoE;protein_id=OFO29136.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 61631 62956 . - . ID=gene-HMPREF3052_04400;Name=HMPREF3052_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04400 GCA_001815685.1|KV821620.1 Protein Homology CDS 61631 62956 . - 0 ID=cds-OFO29137.1;Parent=gene-HMPREF3052_04400;Dbxref=NCBI_GP:OFO29137.1;Name=OFO29137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679093.1;locus_tag=HMPREF3052_04400;product=tRNA(Ile)-lysidine synthetase;protein_id=OFO29137.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 63045 64004 . - . ID=gene-HMPREF3052_04405;Name=HMPREF3052_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04405 GCA_001815685.1|KV821620.1 Protein Homology CDS 63045 64004 . - 0 ID=cds-OFO29138.1;Parent=gene-HMPREF3052_04405;Dbxref=NCBI_GP:OFO29138.1;Name=OFO29138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343070.1;locus_tag=HMPREF3052_04405;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=OFO29138.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 64209 64610 . + . ID=gene-HMPREF3052_04410;Name=HMPREF3052_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04410 GCA_001815685.1|KV821620.1 Protein Homology CDS 64209 64610 . + 0 ID=cds-OFO29139.1;Parent=gene-HMPREF3052_04410;Dbxref=NCBI_GP:OFO29139.1;Name=OFO29139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311355.1;locus_tag=HMPREF3052_04410;product=RNA-binding protein;protein_id=OFO29139.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 64706 65905 . - . ID=gene-HMPREF3052_04415;Name=HMPREF3052_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04415 GCA_001815685.1|KV821620.1 Protein Homology CDS 64706 65905 . - 0 ID=cds-OFO29140.1;Parent=gene-HMPREF3052_04415;Dbxref=NCBI_GP:OFO29140.1;Name=OFO29140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683666.1;locus_tag=HMPREF3052_04415;product=hypothetical protein;protein_id=OFO29140.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 66002 67765 . - . ID=gene-HMPREF3052_04420;Name=HMPREF3052_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04420 GCA_001815685.1|KV821620.1 Protein Homology CDS 66002 67765 . - 0 ID=cds-OFO29141.1;Parent=gene-HMPREF3052_04420;Dbxref=NCBI_GP:OFO29141.1;Name=OFO29141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683309.1;locus_tag=HMPREF3052_04420;product=exodeoxyribonuclease V subunit alpha;protein_id=OFO29141.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 67898 68581 . - . ID=gene-HMPREF3052_04425;Name=HMPREF3052_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04425 GCA_001815685.1|KV821620.1 Protein Homology CDS 67898 68581 . - 0 ID=cds-OFO29142.1;Parent=gene-HMPREF3052_04425;Dbxref=NCBI_GP:OFO29142.1;Name=OFO29142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519733.1;locus_tag=HMPREF3052_04425;product=lipoprotein ABC transporter ATP-binding protein;protein_id=OFO29142.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 68574 69824 . - . ID=gene-HMPREF3052_04430;Name=HMPREF3052_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04430 GCA_001815685.1|KV821620.1 Protein Homology CDS 68574 69824 . - 0 ID=cds-OFO29143.1;Parent=gene-HMPREF3052_04430;Dbxref=NCBI_GP:OFO29143.1;Name=OFO29143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519734.1;locus_tag=HMPREF3052_04430;product=permease;protein_id=OFO29143.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 70039 70326 . + . ID=gene-HMPREF3052_04435;Name=HMPREF3052_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04435 GCA_001815685.1|KV821620.1 Protein Homology CDS 70039 70326 . + 0 ID=cds-OFO29144.1;Parent=gene-HMPREF3052_04435;Dbxref=NCBI_GP:OFO29144.1;Name=OFO29144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683377.1;locus_tag=HMPREF3052_04435;product=hypothetical protein;protein_id=OFO29144.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 70389 70994 . - . ID=gene-HMPREF3052_04440;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF3052_04440 GCA_001815685.1|KV821620.1 Protein Homology CDS 70389 70994 . - 0 ID=cds-OFO29145.1;Parent=gene-HMPREF3052_04440;Dbxref=NCBI_GP:OFO29145.1;Name=OFO29145.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679078.1;locus_tag=HMPREF3052_04440;product=recombination protein RecR;protein_id=OFO29145.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 71077 72930 . - . ID=gene-HMPREF3052_04445;Name=HMPREF3052_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04445 GCA_001815685.1|KV821620.1 Protein Homology CDS 71077 72930 . - 0 ID=cds-OFO29146.1;Parent=gene-HMPREF3052_04445;Dbxref=NCBI_GP:OFO29146.1;Name=OFO29146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519736.1;locus_tag=HMPREF3052_04445;product=peptidylprolyl isomerase;protein_id=OFO29146.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 73076 73423 . - . ID=gene-HMPREF3052_04450;Name=HMPREF3052_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04450 GCA_001815685.1|KV821620.1 Protein Homology CDS 73076 73423 . - 0 ID=cds-OFO29147.1;Parent=gene-HMPREF3052_04450;Dbxref=NCBI_GP:OFO29147.1;Name=OFO29147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683670.1;locus_tag=HMPREF3052_04450;product=arsenate reductase;protein_id=OFO29147.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 73505 75994 . - . ID=gene-HMPREF3052_04455;Name=HMPREF3052_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04455 GCA_001815685.1|KV821620.1 Protein Homology CDS 73505 75994 . - 0 ID=cds-OFO29148.1;Parent=gene-HMPREF3052_04455;Dbxref=NCBI_GP:OFO29148.1;Name=OFO29148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519738.1;locus_tag=HMPREF3052_04455;product=ribonuclease R;protein_id=OFO29148.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 76314 76400 . + . ID=gene-HMPREF3052_04460;Name=HMPREF3052_04460;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_04460 GCA_001815685.1|KV821620.1 tRNAscan-SE tRNA 76314 76400 . + . ID=rna-HMPREF3052_04460;Parent=gene-HMPREF3052_04460;anticodon=(pos:76348..76350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_04460;product=tRNA-Leu GCA_001815685.1|KV821620.1 tRNAscan-SE exon 76314 76400 . + . ID=exon-HMPREF3052_04460-1;Parent=rna-HMPREF3052_04460;anticodon=(pos:76348..76350);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_04460;product=tRNA-Leu GCA_001815685.1|KV821620.1 Genbank gene 76464 76554 . + . ID=gene-HMPREF3052_04465;Name=HMPREF3052_04465;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_04465 GCA_001815685.1|KV821620.1 tRNAscan-SE tRNA 76464 76554 . + . ID=rna-HMPREF3052_04465;Parent=gene-HMPREF3052_04465;anticodon=(pos:76498..76500);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_04465;product=tRNA-Ser GCA_001815685.1|KV821620.1 tRNAscan-SE exon 76464 76554 . + . ID=exon-HMPREF3052_04465-1;Parent=rna-HMPREF3052_04465;anticodon=(pos:76498..76500);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_04465;product=tRNA-Ser GCA_001815685.1|KV821620.1 Genbank gene 76734 77471 . - . ID=gene-HMPREF3052_04470;Name=HMPREF3052_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04470 GCA_001815685.1|KV821620.1 Protein Homology CDS 76734 77471 . - 0 ID=cds-OFO29050.1;Parent=gene-HMPREF3052_04470;Dbxref=NCBI_GP:OFO29050.1;Name=OFO29050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519739.1;locus_tag=HMPREF3052_04470;product=nuclease;protein_id=OFO29050.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 77545 78216 . - . ID=gene-HMPREF3052_04475;Name=HMPREF3052_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04475 GCA_001815685.1|KV821620.1 Protein Homology CDS 77545 78216 . - 0 ID=cds-OFO29051.1;Parent=gene-HMPREF3052_04475;Dbxref=NCBI_GP:OFO29051.1;Name=OFO29051.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746943.1;locus_tag=HMPREF3052_04475;product=ribose-5-phosphate isomerase;protein_id=OFO29051.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 78260 78739 . - . ID=gene-HMPREF3052_04480;Name=HMPREF3052_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04480 GCA_001815685.1|KV821620.1 Protein Homology CDS 78260 78739 . - 0 ID=cds-OFO29052.1;Parent=gene-HMPREF3052_04480;Dbxref=NCBI_GP:OFO29052.1;Name=OFO29052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679071.1;locus_tag=HMPREF3052_04480;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFO29052.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 78772 79458 . - . ID=gene-HMPREF3052_04485;Name=HMPREF3052_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04485 GCA_001815685.1|KV821620.1 Protein Homology CDS 78772 79458 . - 0 ID=cds-OFO29053.1;Parent=gene-HMPREF3052_04485;Dbxref=NCBI_GP:OFO29053.1;Name=OFO29053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679069.1;locus_tag=HMPREF3052_04485;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFO29053.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 79455 80192 . - . ID=gene-HMPREF3052_04490;Name=HMPREF3052_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04490 GCA_001815685.1|KV821620.1 Protein Homology CDS 79455 80192 . - 0 ID=cds-OFO29054.1;Parent=gene-HMPREF3052_04490;Dbxref=NCBI_GP:OFO29054.1;Name=OFO29054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679064.1;locus_tag=HMPREF3052_04490;product=DNA polymerase III subunit epsilon;protein_id=OFO29054.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 80534 81010 . + . ID=gene-HMPREF3052_04495;Name=HMPREF3052_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04495 GCA_001815685.1|KV821620.1 Protein Homology CDS 80534 81010 . + 0 ID=cds-OFO29055.1;Parent=gene-HMPREF3052_04495;Dbxref=NCBI_GP:OFO29055.1;Name=OFO29055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519743.1;locus_tag=HMPREF3052_04495;product=hypothetical protein;protein_id=OFO29055.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 81157 81840 . + . ID=gene-HMPREF3052_04500;Name=HMPREF3052_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04500 GCA_001815685.1|KV821620.1 Protein Homology CDS 81157 81840 . + 0 ID=cds-OFO29056.1;Parent=gene-HMPREF3052_04500;Dbxref=NCBI_GP:OFO29056.1;Name=OFO29056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746953.1;locus_tag=HMPREF3052_04500;product=16S rRNA pseudouridine(516) synthase;protein_id=OFO29056.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 82621 83985 . + . ID=gene-HMPREF3052_04505;Name=HMPREF3052_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04505 GCA_001815685.1|KV821620.1 Protein Homology CDS 82621 83985 . + 0 ID=cds-OFO29057.1;Parent=gene-HMPREF3052_04505;Dbxref=NCBI_GP:OFO29057.1;Name=OFO29057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519747.1;locus_tag=HMPREF3052_04505;product=transporter;protein_id=OFO29057.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 84046 85737 . - . ID=gene-HMPREF3052_04510;Name=HMPREF3052_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04510 GCA_001815685.1|KV821620.1 Protein Homology CDS 84046 85737 . - 0 ID=cds-OFO29058.1;Parent=gene-HMPREF3052_04510;Dbxref=NCBI_GP:OFO29058.1;Name=OFO29058.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688490.1;locus_tag=HMPREF3052_04510;product=D-lactate dehydrogenase;protein_id=OFO29058.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 85903 88023 . - . ID=gene-HMPREF3052_04515;Name=HMPREF3052_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04515 GCA_001815685.1|KV821620.1 Protein Homology CDS 85903 88023 . - 0 ID=cds-OFO29059.1;Parent=gene-HMPREF3052_04515;Dbxref=NCBI_GP:OFO29059.1;Name=OFO29059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312233.1;locus_tag=HMPREF3052_04515;product=polyribonucleotide nucleotidyltransferase;protein_id=OFO29059.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 88260 89123 . - . ID=gene-HMPREF3052_04520;Name=HMPREF3052_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04520 GCA_001815685.1|KV821620.1 Protein Homology CDS 88260 89123 . - 0 ID=cds-OFO29060.1;Parent=gene-HMPREF3052_04520;Dbxref=NCBI_GP:OFO29060.1;Name=OFO29060.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449252.1;locus_tag=HMPREF3052_04520;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=OFO29060.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 89276 90124 . - . ID=gene-HMPREF3052_04525;Name=HMPREF3052_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04525 GCA_001815685.1|KV821620.1 Protein Homology CDS 89276 90124 . - 0 ID=cds-OFO29072.1;Parent=gene-HMPREF3052_04525;Dbxref=NCBI_GP:OFO29072.1;Name=OFO29072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686527.1;locus_tag=HMPREF3052_04525;product=calcium-binding protein;protein_id=OFO29072.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 91076 91939 . + . ID=gene-HMPREF3052_04530;Name=HMPREF3052_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04530 GCA_001815685.1|KV821620.1 Protein Homology CDS 91076 91939 . + 0 ID=cds-OFO29061.1;Parent=gene-HMPREF3052_04530;Dbxref=NCBI_GP:OFO29061.1;Name=OFO29061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746969.1;locus_tag=HMPREF3052_04530;product=NAD(P)-dependent oxidoreductase;protein_id=OFO29061.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 92090 94945 . + . ID=gene-HMPREF3052_04535;Name=HMPREF3052_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04535 GCA_001815685.1|KV821620.1 Protein Homology CDS 92090 94945 . + 0 ID=cds-OFO29062.1;Parent=gene-HMPREF3052_04535;Dbxref=NCBI_GP:OFO29062.1;Name=OFO29062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224574.1;locus_tag=HMPREF3052_04535;product=ABC-ATPase UvrA;protein_id=OFO29062.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 94961 95860 . + . ID=gene-HMPREF3052_04540;Name=HMPREF3052_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04540 GCA_001815685.1|KV821620.1 GeneMarkS+ CDS 94961 95860 . + 0 ID=cds-OFO29063.1;Parent=gene-HMPREF3052_04540;Dbxref=NCBI_GP:OFO29063.1;Name=OFO29063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04540;product=hypothetical protein;protein_id=OFO29063.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 96151 96681 . + . ID=gene-HMPREF3052_04545;Name=HMPREF3052_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04545 GCA_001815685.1|KV821620.1 Protein Homology CDS 96151 96681 . + 0 ID=cds-OFO29064.1;Parent=gene-HMPREF3052_04545;Dbxref=NCBI_GP:OFO29064.1;Name=OFO29064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003788294.1;locus_tag=HMPREF3052_04545;product=transposase;protein_id=OFO29064.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 97066 97455 . - . ID=gene-HMPREF3052_04550;Name=HMPREF3052_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04550 GCA_001815685.1|KV821620.1 Protein Homology CDS 97066 97455 . - 0 ID=cds-OFO29065.1;Parent=gene-HMPREF3052_04550;Dbxref=NCBI_GP:OFO29065.1;Name=OFO29065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768017.1;locus_tag=HMPREF3052_04550;product=hypothetical protein;protein_id=OFO29065.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 97648 99429 . - . ID=gene-HMPREF3052_04555;Name=HMPREF3052_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04555 GCA_001815685.1|KV821620.1 Protein Homology CDS 97648 99429 . - 0 ID=cds-OFO29066.1;Parent=gene-HMPREF3052_04555;Dbxref=NCBI_GP:OFO29066.1;Name=OFO29066.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679031.1;locus_tag=HMPREF3052_04555;product=ribonucleoside-triphosphate reductase;protein_id=OFO29066.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 99547 100056 . - . ID=gene-HMPREF3052_04560;Name=HMPREF3052_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04560 GCA_001815685.1|KV821620.1 Protein Homology CDS 99547 100056 . - 0 ID=cds-OFO29067.1;Parent=gene-HMPREF3052_04560;Dbxref=NCBI_GP:OFO29067.1;Name=OFO29067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683321.1;locus_tag=HMPREF3052_04560;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=OFO29067.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 100344 101486 . - . ID=gene-HMPREF3052_04565;Name=HMPREF3052_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04565 GCA_001815685.1|KV821620.1 Protein Homology CDS 100344 101486 . - 0 ID=cds-OFO29068.1;Parent=gene-HMPREF3052_04565;Dbxref=NCBI_GP:OFO29068.1;Name=OFO29068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683579.1;locus_tag=HMPREF3052_04565;product=DNA methylase;protein_id=OFO29068.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 101603 102994 . - . ID=gene-HMPREF3052_04570;Name=HMPREF3052_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04570 GCA_001815685.1|KV821620.1 Protein Homology CDS 101603 102994 . - 0 ID=cds-OFO29069.1;Parent=gene-HMPREF3052_04570;Dbxref=NCBI_GP:OFO29069.1;Name=OFO29069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675025.1;locus_tag=HMPREF3052_04570;product=xanthine permease;protein_id=OFO29069.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 103331 104206 . + . ID=gene-HMPREF3052_04575;Name=HMPREF3052_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04575 GCA_001815685.1|KV821620.1 Protein Homology CDS 103331 104206 . + 0 ID=cds-OFO29070.1;Parent=gene-HMPREF3052_04575;Dbxref=NCBI_GP:OFO29070.1;Name=OFO29070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010360271.1;locus_tag=HMPREF3052_04575;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=OFO29070.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 104288 105418 . + . ID=gene-HMPREF3052_04580;Name=HMPREF3052_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04580 GCA_001815685.1|KV821620.1 Protein Homology CDS 104288 105418 . + 0 ID=cds-OFO29071.1;Parent=gene-HMPREF3052_04580;Dbxref=NCBI_GP:OFO29071.1;Name=OFO29071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679020.1;locus_tag=HMPREF3052_04580;product=hypothetical protein;protein_id=OFO29071.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 105666 105896 . + . ID=gene-HMPREF3052_04585;Name=HMPREF3052_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04585 GCA_001815685.1|KV821620.1 Protein Homology CDS 105666 105896 . + 0 ID=cds-OFO29020.1;Parent=gene-HMPREF3052_04585;Dbxref=NCBI_GP:OFO29020.1;Name=OFO29020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679018.1;locus_tag=HMPREF3052_04585;product=hypothetical protein;protein_id=OFO29020.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 105906 106499 . + . ID=gene-HMPREF3052_04590;Name=HMPREF3052_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04590 GCA_001815685.1|KV821620.1 Protein Homology CDS 105906 106499 . + 0 ID=cds-OFO29021.1;Parent=gene-HMPREF3052_04590;Dbxref=NCBI_GP:OFO29021.1;Name=OFO29021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756980.1;locus_tag=HMPREF3052_04590;product=non-canonical purine NTP pyrophosphatase;protein_id=OFO29021.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 106574 107083 . + . ID=gene-HMPREF3052_04595;Name=HMPREF3052_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04595 GCA_001815685.1|KV821620.1 Protein Homology CDS 106574 107083 . + 0 ID=cds-OFO29022.1;Parent=gene-HMPREF3052_04595;Dbxref=NCBI_GP:OFO29022.1;Name=OFO29022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683634.1;locus_tag=HMPREF3052_04595;product=hypothetical protein;protein_id=OFO29022.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 107132 107494 . + . ID=gene-HMPREF3052_04600;Name=HMPREF3052_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04600 GCA_001815685.1|KV821620.1 Protein Homology CDS 107132 107494 . + 0 ID=cds-OFO29023.1;Parent=gene-HMPREF3052_04600;Dbxref=NCBI_GP:OFO29023.1;Name=OFO29023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519773.1;locus_tag=HMPREF3052_04600;product=thioredoxin;protein_id=OFO29023.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 107591 108766 . + . ID=gene-HMPREF3052_04605;Name=HMPREF3052_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04605 GCA_001815685.1|KV821620.1 Protein Homology CDS 107591 108766 . + 0 ID=cds-OFO29024.1;Parent=gene-HMPREF3052_04605;Dbxref=NCBI_GP:OFO29024.1;Name=OFO29024.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746998.1;locus_tag=HMPREF3052_04605;product=YggW family oxidoreductase;protein_id=OFO29024.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 109045 109413 . - . ID=gene-HMPREF3052_04610;Name=HMPREF3052_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04610 GCA_001815685.1|KV821620.1 Protein Homology CDS 109045 109413 . - 0 ID=cds-OFO29025.1;Parent=gene-HMPREF3052_04610;Dbxref=NCBI_GP:OFO29025.1;Name=OFO29025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519776.1;locus_tag=HMPREF3052_04610;product=hypothetical protein;protein_id=OFO29025.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 109410 109619 . - . ID=gene-HMPREF3052_04615;Name=HMPREF3052_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04615 GCA_001815685.1|KV821620.1 Protein Homology CDS 109410 109619 . - 0 ID=cds-OFO29040.1;Parent=gene-HMPREF3052_04615;Dbxref=NCBI_GP:OFO29040.1;Name=OFO29040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747004.1;locus_tag=HMPREF3052_04615;product=dioxygenase;protein_id=OFO29040.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 109722 110300 . - . ID=gene-HMPREF3052_04620;Name=HMPREF3052_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04620 GCA_001815685.1|KV821620.1 Protein Homology CDS 109722 110300 . - 0 ID=cds-OFO29026.1;Parent=gene-HMPREF3052_04620;Dbxref=NCBI_GP:OFO29026.1;Name=OFO29026.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679004.1;locus_tag=HMPREF3052_04620;product=aminoacyl-tRNA hydrolase;protein_id=OFO29026.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 110355 110627 . - . ID=gene-HMPREF3052_04625;Name=HMPREF3052_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04625 GCA_001815685.1|KV821620.1 Protein Homology CDS 110355 110627 . - 0 ID=cds-OFO29027.1;Parent=gene-HMPREF3052_04625;Dbxref=NCBI_GP:OFO29027.1;Name=OFO29027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519778.1;locus_tag=HMPREF3052_04625;product=RnfH family protein;protein_id=OFO29027.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 110620 111051 . - . ID=gene-HMPREF3052_04630;Name=HMPREF3052_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04630 GCA_001815685.1|KV821620.1 Protein Homology CDS 110620 111051 . - 0 ID=cds-OFO29028.1;Parent=gene-HMPREF3052_04630;Dbxref=NCBI_GP:OFO29028.1;Name=OFO29028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173302.1;locus_tag=HMPREF3052_04630;product=ubiquinone-binding protein;protein_id=OFO29028.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 111142 113049 . - . ID=gene-HMPREF3052_04635;Name=HMPREF3052_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04635 GCA_001815685.1|KV821620.1 Protein Homology CDS 111142 113049 . - 0 ID=cds-OFO29029.1;Parent=gene-HMPREF3052_04635;Dbxref=NCBI_GP:OFO29029.1;Name=OFO29029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581094.1;locus_tag=HMPREF3052_04635;product=ABC transporter ATP-binding protein;protein_id=OFO29029.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 113172 114203 . - . ID=gene-HMPREF3052_04640;Name=HMPREF3052_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04640 GCA_001815685.1|KV821620.1 Protein Homology CDS 113172 114203 . - 0 ID=cds-OFO29030.1;Parent=gene-HMPREF3052_04640;Dbxref=NCBI_GP:OFO29030.1;Name=OFO29030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217138.1;locus_tag=HMPREF3052_04640;product=Holliday junction DNA helicase RuvB;protein_id=OFO29030.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 114420 115079 . + . ID=gene-HMPREF3052_04645;Name=HMPREF3052_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04645 GCA_001815685.1|KV821620.1 Protein Homology CDS 114420 115079 . + 0 ID=cds-OFO29031.1;Parent=gene-HMPREF3052_04645;Dbxref=NCBI_GP:OFO29031.1;Name=OFO29031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678996.1;locus_tag=HMPREF3052_04645;product=cytidylate kinase;protein_id=OFO29031.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 115240 116919 . + . ID=gene-HMPREF3052_04650;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=HMPREF3052_04650 GCA_001815685.1|KV821620.1 Protein Homology CDS 115240 116919 . + 0 ID=cds-OFO29041.1;Parent=gene-HMPREF3052_04650;Dbxref=NCBI_GP:OFO29041.1;Name=OFO29041.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343488.1;locus_tag=HMPREF3052_04650;product=30S ribosomal protein S1;protein_id=OFO29041.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 116930 117244 . + . ID=gene-HMPREF3052_04655;Name=HMPREF3052_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04655 GCA_001815685.1|KV821620.1 Protein Homology CDS 116930 117244 . + 0 ID=cds-OFO29032.1;Parent=gene-HMPREF3052_04655;Dbxref=NCBI_GP:OFO29032.1;Name=OFO29032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744632.1;locus_tag=HMPREF3052_04655;product=integration host factor subunit beta;protein_id=OFO29032.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 117504 118640 . + . ID=gene-HMPREF3052_04660;Name=HMPREF3052_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04660 GCA_001815685.1|KV821620.1 Protein Homology CDS 117504 118640 . + 0 ID=cds-OFO29033.1;Parent=gene-HMPREF3052_04660;Dbxref=NCBI_GP:OFO29033.1;Name=OFO29033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687787.1;locus_tag=HMPREF3052_04660;product=ATPase;protein_id=OFO29033.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 118735 119160 . + . ID=gene-HMPREF3052_04665;Name=HMPREF3052_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04665 GCA_001815685.1|KV821620.1 Protein Homology CDS 118735 119160 . + 0 ID=cds-OFO29034.1;Parent=gene-HMPREF3052_04665;Dbxref=NCBI_GP:OFO29034.1;Name=OFO29034.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RMG0.1;locus_tag=HMPREF3052_04665;product=nucleoside-diphosphate kinase;protein_id=OFO29034.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 119330 120418 . + . ID=gene-HMPREF3052_04670;Name=HMPREF3052_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04670 GCA_001815685.1|KV821620.1 Protein Homology CDS 119330 120418 . + 0 ID=cds-OFO29035.1;Parent=gene-HMPREF3052_04670;Dbxref=NCBI_GP:OFO29035.1;Name=OFO29035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F911.1;locus_tag=HMPREF3052_04670;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=OFO29035.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 120427 121182 . + . ID=gene-HMPREF3052_04675;Name=HMPREF3052_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04675 GCA_001815685.1|KV821620.1 Protein Homology CDS 120427 121182 . + 0 ID=cds-OFO29036.1;Parent=gene-HMPREF3052_04675;Dbxref=NCBI_GP:OFO29036.1;Name=OFO29036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678984.1;locus_tag=HMPREF3052_04675;product=type IV pilus biogenesis/stability protein PilW;protein_id=OFO29036.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 121183 122067 . + . ID=gene-HMPREF3052_04680;Name=HMPREF3052_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04680 GCA_001815685.1|KV821620.1 Protein Homology CDS 121183 122067 . + 0 ID=cds-OFO29037.1;Parent=gene-HMPREF3052_04680;Dbxref=NCBI_GP:OFO29037.1;Name=OFO29037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683275.1;locus_tag=HMPREF3052_04680;product=Cro/Cl family transcriptional regulator;protein_id=OFO29037.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 122069 123334 . + . ID=gene-HMPREF3052_04685;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HMPREF3052_04685 GCA_001815685.1|KV821620.1 Protein Homology CDS 122069 123334 . + 0 ID=cds-OFO29038.1;Parent=gene-HMPREF3052_04685;Dbxref=NCBI_GP:OFO29038.1;Name=OFO29038.1;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;gbkey=CDS;gene=ispG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687792.1;locus_tag=HMPREF3052_04685;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=OFO29038.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 123368 124213 . + . ID=gene-HMPREF3052_04690;Name=HMPREF3052_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04690 GCA_001815685.1|KV821620.1 Protein Homology CDS 123368 124213 . + 0 ID=cds-OFO29039.1;Parent=gene-HMPREF3052_04690;Dbxref=NCBI_GP:OFO29039.1;Name=OFO29039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747031.1;locus_tag=HMPREF3052_04690;product=hypothetical protein;protein_id=OFO29039.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 124272 125813 . - . ID=gene-HMPREF3052_04695;Name=HMPREF3052_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04695 GCA_001815685.1|KV821620.1 Protein Homology CDS 124272 125813 . - 0 ID=cds-OFO29042.1;Parent=gene-HMPREF3052_04695;Dbxref=NCBI_GP:OFO29042.1;Name=OFO29042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707780.1;locus_tag=HMPREF3052_04695;product=MFS transporter;protein_id=OFO29042.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 126162 126743 . - . ID=gene-HMPREF3052_04700;Name=HMPREF3052_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04700 GCA_001815685.1|KV821620.1 Protein Homology CDS 126162 126743 . - 0 ID=cds-OFO28997.1;Parent=gene-HMPREF3052_04700;Dbxref=NCBI_GP:OFO28997.1;Name=OFO28997.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019957326.1;locus_tag=HMPREF3052_04700;product=superoxide dismutase;protein_id=OFO28997.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 126898 128304 . + . ID=gene-HMPREF3052_04705;Name=HMPREF3052_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04705 GCA_001815685.1|KV821620.1 Protein Homology CDS 126898 128304 . + 0 ID=cds-OFO28998.1;Parent=gene-HMPREF3052_04705;Dbxref=NCBI_GP:OFO28998.1;Name=OFO28998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283371.1;locus_tag=HMPREF3052_04705;product=replicative DNA helicase;protein_id=OFO28998.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 128462 129127 . + . ID=gene-HMPREF3052_04710;Name=HMPREF3052_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04710 GCA_001815685.1|KV821620.1 Protein Homology CDS 128462 129127 . + 0 ID=cds-OFO28999.1;Parent=gene-HMPREF3052_04710;Dbxref=NCBI_GP:OFO28999.1;Name=OFO28999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519798.1;locus_tag=HMPREF3052_04710;product=type II secretion system protein GspH;protein_id=OFO28999.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 129233 129790 . + . ID=gene-HMPREF3052_04715;Name=HMPREF3052_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04715 GCA_001815685.1|KV821620.1 Protein Homology CDS 129233 129790 . + 0 ID=cds-OFO29000.1;Parent=gene-HMPREF3052_04715;Dbxref=NCBI_GP:OFO29000.1;Name=OFO29000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678969.1;locus_tag=HMPREF3052_04715;product=type IV pilus modification protein PilV;protein_id=OFO29000.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 129793 130728 . + . ID=gene-HMPREF3052_04720;Name=HMPREF3052_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04720 GCA_001815685.1|KV821620.1 Protein Homology CDS 129793 130728 . + 0 ID=cds-OFO29001.1;Parent=gene-HMPREF3052_04720;Dbxref=NCBI_GP:OFO29001.1;Name=OFO29001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683284.1;locus_tag=HMPREF3052_04720;product=pilus assembly protein PilW;protein_id=OFO29001.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 130707 131252 . + . ID=gene-HMPREF3052_04725;Name=HMPREF3052_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04725 GCA_001815685.1|KV821620.1 Protein Homology CDS 130707 131252 . + 0 ID=cds-OFO29002.1;Parent=gene-HMPREF3052_04725;Dbxref=NCBI_GP:OFO29002.1;Name=OFO29002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683429.1;locus_tag=HMPREF3052_04725;product=pilus assembly protein PilX;protein_id=OFO29002.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 131257 131745 . + . ID=gene-HMPREF3052_04730;Name=HMPREF3052_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04730 GCA_001815685.1|KV821620.1 Protein Homology CDS 131257 131745 . + 0 ID=cds-OFO29003.1;Parent=gene-HMPREF3052_04730;Dbxref=NCBI_GP:OFO29003.1;Name=OFO29003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683280.1;locus_tag=HMPREF3052_04730;product=type IV pilin;protein_id=OFO29003.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 131798 132418 . - . ID=gene-HMPREF3052_04735;Name=HMPREF3052_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04735 GCA_001815685.1|KV821620.1 Protein Homology CDS 131798 132418 . - 0 ID=cds-OFO29004.1;Parent=gene-HMPREF3052_04735;Dbxref=NCBI_GP:OFO29004.1;Name=OFO29004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116747.1;locus_tag=HMPREF3052_04735;product=DNA mismatch repair protein MutS;protein_id=OFO29004.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 132555 132932 . + . ID=gene-HMPREF3052_04740;Name=HMPREF3052_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04740 GCA_001815685.1|KV821620.1 Protein Homology CDS 132555 132932 . + 0 ID=cds-OFO29005.1;Parent=gene-HMPREF3052_04740;Dbxref=NCBI_GP:OFO29005.1;Name=OFO29005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519804.1;locus_tag=HMPREF3052_04740;product=hypothetical protein;protein_id=OFO29005.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 133068 134543 . + . ID=gene-HMPREF3052_04745;Name=HMPREF3052_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04745 GCA_001815685.1|KV821620.1 Protein Homology CDS 133068 134543 . + 0 ID=cds-OFO29006.1;Parent=gene-HMPREF3052_04745;Dbxref=NCBI_GP:OFO29006.1;Name=OFO29006.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173174.1;locus_tag=HMPREF3052_04745;product=anthranilate synthase;protein_id=OFO29006.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 134555 134767 . - . ID=gene-HMPREF3052_04750;Name=HMPREF3052_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04750 GCA_001815685.1|KV821620.1 Protein Homology CDS 134555 134767 . - 0 ID=cds-OFO29007.1;Parent=gene-HMPREF3052_04750;Dbxref=NCBI_GP:OFO29007.1;Name=OFO29007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771613.1;locus_tag=HMPREF3052_04750;product=hypothetical protein;protein_id=OFO29007.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 134766 135056 . + . ID=gene-HMPREF3052_04755;Name=HMPREF3052_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04755 GCA_001815685.1|KV821620.1 Protein Homology CDS 134766 135056 . + 0 ID=cds-OFO29008.1;Parent=gene-HMPREF3052_04755;Dbxref=NCBI_GP:OFO29008.1;Name=OFO29008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742505.1;locus_tag=HMPREF3052_04755;product=GIY-YIG nuclease;protein_id=OFO29008.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 135268 136404 . + . ID=gene-HMPREF3052_04760;Name=HMPREF3052_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04760 GCA_001815685.1|KV821620.1 Protein Homology CDS 135268 136404 . + 0 ID=cds-OFO29009.1;Parent=gene-HMPREF3052_04760;Dbxref=NCBI_GP:OFO29009.1;Name=OFO29009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286088.1;locus_tag=HMPREF3052_04760;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=OFO29009.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 136477 136959 . + . ID=gene-HMPREF3052_04765;Name=HMPREF3052_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04765 GCA_001815685.1|KV821620.1 Protein Homology CDS 136477 136959 . + 0 ID=cds-OFO29010.1;Parent=gene-HMPREF3052_04765;Dbxref=NCBI_GP:OFO29010.1;Name=OFO29010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224566.1;locus_tag=HMPREF3052_04765;product=GNAT family acetyltransferase;protein_id=OFO29010.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 136996 138972 . + . ID=gene-HMPREF3052_04770;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=HMPREF3052_04770 GCA_001815685.1|KV821620.1 Protein Homology CDS 136996 138972 . + 0 ID=cds-OFO29011.1;Parent=gene-HMPREF3052_04770;Dbxref=NCBI_GP:OFO29011.1;Name=OFO29011.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235944.1;locus_tag=HMPREF3052_04770;product=DNA mismatch repair protein MutL;protein_id=OFO29011.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 139030 139872 . - . ID=gene-HMPREF3052_04775;Name=HMPREF3052_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04775 GCA_001815685.1|KV821620.1 Protein Homology CDS 139030 139872 . - 0 ID=cds-OFO29017.1;Parent=gene-HMPREF3052_04775;Dbxref=NCBI_GP:OFO29017.1;Name=OFO29017.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756394.1;locus_tag=HMPREF3052_04775;product=3-deoxy-8-phosphooctulonate synthase;protein_id=OFO29017.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 139947 140330 . - . ID=gene-HMPREF3052_04780;Name=HMPREF3052_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04780 GCA_001815685.1|KV821620.1 Protein Homology CDS 139947 140330 . - 0 ID=cds-OFO29012.1;Parent=gene-HMPREF3052_04780;Dbxref=NCBI_GP:OFO29012.1;Name=OFO29012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273380.1;locus_tag=HMPREF3052_04780;product=aspartate 1-decarboxylase;protein_id=OFO29012.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 140409 141950 . - . ID=gene-HMPREF3052_04785;Name=HMPREF3052_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04785 GCA_001815685.1|KV821620.1 Protein Homology CDS 140409 141950 . - 0 ID=cds-OFO29013.1;Parent=gene-HMPREF3052_04785;Dbxref=NCBI_GP:OFO29013.1;Name=OFO29013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519814.1;locus_tag=HMPREF3052_04785;product=hypothetical protein;protein_id=OFO29013.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 142306 143460 . + . ID=gene-HMPREF3052_04790;Name=HMPREF3052_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04790 GCA_001815685.1|KV821620.1 Protein Homology CDS 142306 143460 . + 0 ID=cds-OFO29014.1;Parent=gene-HMPREF3052_04790;Dbxref=NCBI_GP:OFO29014.1;Name=OFO29014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012697040.1;locus_tag=HMPREF3052_04790;product=hypothetical protein;protein_id=OFO29014.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 143535 144515 . + . ID=gene-HMPREF3052_04795;Name=HMPREF3052_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04795 GCA_001815685.1|KV821620.1 GeneMarkS+ CDS 143535 144515 . + 0 ID=cds-OFO29015.1;Parent=gene-HMPREF3052_04795;Dbxref=NCBI_GP:OFO29015.1;Name=OFO29015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04795;product=hypothetical protein;protein_id=OFO29015.1;transl_table=11 GCA_001815685.1|KV821620.1 Genbank gene 144794 145660 . + . ID=gene-HMPREF3052_04800;Name=HMPREF3052_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04800 GCA_001815685.1|KV821620.1 Protein Homology CDS 144794 145660 . + 0 ID=cds-OFO29016.1;Parent=gene-HMPREF3052_04800;Dbxref=NCBI_GP:OFO29016.1;Name=OFO29016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690940.1;locus_tag=HMPREF3052_04800;product=hypothetical protein;protein_id=OFO29016.1;transl_table=11 ##sequence-region KV821621.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821621.1 Genbank region 1 240 . + . ID=KV821621.1:1..240;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821621.1 Genbank pseudogene 1 240 . + . ID=gene-HMPREF3052_04805;Name=HMPREF3052_04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_04805;pseudo=true GCA_001815685.1|KV821621.1 GeneMarkS+ CDS 1 240 . + 1 ID=cds-HMPREF3052_04805;Parent=gene-HMPREF3052_04805;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04805;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821622.1 1 1186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821622.1 Genbank region 1 1186 . + . ID=KV821622.1:1..1186;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821622.1 Genbank gene 1 1185 . - . ID=gene-HMPREF3052_04810;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF3052_04810 GCA_001815685.1|KV821622.1 Protein Homology CDS 1 1185 . - 0 ID=cds-OFO28958.1;Parent=gene-HMPREF3052_04810;Dbxref=NCBI_GP:OFO28958.1;Name=OFO28958.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242184.1;locus_tag=HMPREF3052_04810;product=elongation factor Tu;protein_id=OFO28958.1;transl_table=11 ##sequence-region KV821623.1 1 1684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821623.1 Genbank region 1 1684 . + . ID=KV821623.1:1..1684;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821623.1 Genbank gene 357 1211 . - . ID=gene-HMPREF3052_04815;Name=HMPREF3052_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04815 GCA_001815685.1|KV821623.1 Protein Homology CDS 357 1211 . - 0 ID=cds-OFO28957.1;Parent=gene-HMPREF3052_04815;Dbxref=NCBI_GP:OFO28957.1;Name=OFO28957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761033.1;locus_tag=HMPREF3052_04815;product=UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase;protein_id=OFO28957.1;transl_table=11 GCA_001815685.1|KV821623.1 Genbank pseudogene 1431 1684 . - . ID=gene-HMPREF3052_04820;Name=HMPREF3052_04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_04820;pseudo=true GCA_001815685.1|KV821623.1 GeneMarkS+ CDS 1431 1684 . - 2 ID=cds-HMPREF3052_04820;Parent=gene-HMPREF3052_04820;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_04820;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821624.1 1 2130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821624.1 Genbank region 1 2130 . + . ID=KV821624.1:1..2130;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821624.1 Genbank pseudogene 1 429 . + . ID=gene-HMPREF3052_04825;Name=HMPREF3052_04825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_04825;pseudo=true GCA_001815685.1|KV821624.1 Protein Homology CDS 1 429 . + 0 ID=cds-HMPREF3052_04825;Parent=gene-HMPREF3052_04825;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520692.1;locus_tag=HMPREF3052_04825;product=chromophore lyase;pseudo=true;transl_table=11 GCA_001815685.1|KV821624.1 Genbank gene 1078 1929 . + . ID=gene-HMPREF3052_04830;Name=HMPREF3052_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04830 GCA_001815685.1|KV821624.1 Protein Homology CDS 1078 1929 . + 0 ID=cds-OFO28948.1;Parent=gene-HMPREF3052_04830;Dbxref=NCBI_GP:OFO28948.1;Name=OFO28948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000032717.1;locus_tag=HMPREF3052_04830;product=DNA replication protein DnaD;protein_id=OFO28948.1;transl_table=11 ##sequence-region KV821625.1 1 24197 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821625.1 Genbank region 1 24197 . + . ID=KV821625.1:1..24197;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821625.1 Genbank gene 292 3204 . + . ID=gene-HMPREF3052_04835;Name=HMPREF3052_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04835 GCA_001815685.1|KV821625.1 Protein Homology CDS 292 3204 . + 0 ID=cds-OFO28917.1;Parent=gene-HMPREF3052_04835;Dbxref=NCBI_GP:OFO28917.1;Name=OFO28917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686561.1;locus_tag=HMPREF3052_04835;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=OFO28917.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 3736 4224 . + . ID=gene-HMPREF3052_04840;Name=HMPREF3052_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04840 GCA_001815685.1|KV821625.1 Protein Homology CDS 3736 4224 . + 0 ID=cds-OFO28932.1;Parent=gene-HMPREF3052_04840;Dbxref=NCBI_GP:OFO28932.1;Name=OFO28932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226109.1;locus_tag=HMPREF3052_04840;product=transposase;protein_id=OFO28932.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 4418 5422 . + . ID=gene-HMPREF3052_04845;Name=HMPREF3052_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04845 GCA_001815685.1|KV821625.1 Protein Homology CDS 4418 5422 . + 0 ID=cds-OFO28918.1;Parent=gene-HMPREF3052_04845;Dbxref=NCBI_GP:OFO28918.1;Name=OFO28918.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775994.1;locus_tag=HMPREF3052_04845;product=dihydroorotate dehydrogenase;protein_id=OFO28918.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 5479 6072 . - . ID=gene-HMPREF3052_04850;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF3052_04850 GCA_001815685.1|KV821625.1 Protein Homology CDS 5479 6072 . - 0 ID=cds-OFO28933.1;Parent=gene-HMPREF3052_04850;Dbxref=NCBI_GP:OFO28933.1;Name=OFO28933.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742856.1;locus_tag=HMPREF3052_04850;product=ribonuclease HII;protein_id=OFO28933.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 6227 7363 . + . ID=gene-HMPREF3052_04855;Name=HMPREF3052_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04855 GCA_001815685.1|KV821625.1 Protein Homology CDS 6227 7363 . + 0 ID=cds-OFO28919.1;Parent=gene-HMPREF3052_04855;Dbxref=NCBI_GP:OFO28919.1;Name=OFO28919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741970.1;locus_tag=HMPREF3052_04855;product=hypothetical protein;protein_id=OFO28919.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 7535 7611 . - . ID=gene-HMPREF3052_04860;Name=HMPREF3052_04860;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_04860 GCA_001815685.1|KV821625.1 tRNAscan-SE tRNA 7535 7611 . - . ID=rna-HMPREF3052_04860;Parent=gene-HMPREF3052_04860;anticodon=(pos:complement(7575..7577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_04860;product=tRNA-Met GCA_001815685.1|KV821625.1 tRNAscan-SE exon 7535 7611 . - . ID=exon-HMPREF3052_04860-1;Parent=rna-HMPREF3052_04860;anticodon=(pos:complement(7575..7577));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_04860;product=tRNA-Met GCA_001815685.1|KV821625.1 cmsearch binding_site 7723 7822 . + . ID=id-KV821625.1:7723..7822;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001815685.1|KV821625.1 Genbank gene 7917 9806 . + . ID=gene-HMPREF3052_04865;Name=HMPREF3052_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04865 GCA_001815685.1|KV821625.1 Protein Homology CDS 7917 9806 . + 0 ID=cds-OFO28920.1;Parent=gene-HMPREF3052_04865;Dbxref=NCBI_GP:OFO28920.1;Name=OFO28920.1;Note=catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F588.1;locus_tag=HMPREF3052_04865;product=phosphomethylpyrimidine synthase ThiC;protein_id=OFO28920.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 9887 11425 . - . ID=gene-HMPREF3052_04870;Name=HMPREF3052_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04870 GCA_001815685.1|KV821625.1 Protein Homology CDS 9887 11425 . - 0 ID=cds-OFO28921.1;Parent=gene-HMPREF3052_04870;Dbxref=NCBI_GP:OFO28921.1;Name=OFO28921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519114.1;locus_tag=HMPREF3052_04870;product=lipid II flippase MurJ;protein_id=OFO28921.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 11435 12610 . - . ID=gene-HMPREF3052_04875;Name=HMPREF3052_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04875 GCA_001815685.1|KV821625.1 Protein Homology CDS 11435 12610 . - 0 ID=cds-OFO28922.1;Parent=gene-HMPREF3052_04875;Dbxref=NCBI_GP:OFO28922.1;Name=OFO28922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681712.1;locus_tag=HMPREF3052_04875;product=lipid-A-disaccharide synthase;protein_id=OFO28922.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 12771 13547 . - . ID=gene-HMPREF3052_04880;Name=HMPREF3052_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04880 GCA_001815685.1|KV821625.1 Protein Homology CDS 12771 13547 . - 0 ID=cds-OFO28923.1;Parent=gene-HMPREF3052_04880;Dbxref=NCBI_GP:OFO28923.1;Name=OFO28923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235376.1;locus_tag=HMPREF3052_04880;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=OFO28923.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 13622 14071 . - . ID=gene-HMPREF3052_04885;Name=HMPREF3052_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04885 GCA_001815685.1|KV821625.1 Protein Homology CDS 13622 14071 . - 0 ID=cds-OFO28924.1;Parent=gene-HMPREF3052_04885;Dbxref=NCBI_GP:OFO28924.1;Name=OFO28924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256300.1;locus_tag=HMPREF3052_04885;product=beta-hydroxyacyl-ACP dehydratase;protein_id=OFO28924.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 14145 15185 . - . ID=gene-HMPREF3052_04890;Name=HMPREF3052_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04890 GCA_001815685.1|KV821625.1 Protein Homology CDS 14145 15185 . - 0 ID=cds-OFO28925.1;Parent=gene-HMPREF3052_04890;Dbxref=NCBI_GP:OFO28925.1;Name=OFO28925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519119.1;locus_tag=HMPREF3052_04890;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=OFO28925.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 15287 15796 . - . ID=gene-HMPREF3052_04895;Name=HMPREF3052_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04895 GCA_001815685.1|KV821625.1 Protein Homology CDS 15287 15796 . - 0 ID=cds-OFO28926.1;Parent=gene-HMPREF3052_04895;Dbxref=NCBI_GP:OFO28926.1;Name=OFO28926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686729.1;locus_tag=HMPREF3052_04895;product=hypothetical protein;protein_id=OFO28926.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 15908 18304 . - . ID=gene-HMPREF3052_04900;Name=HMPREF3052_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04900 GCA_001815685.1|KV821625.1 Protein Homology CDS 15908 18304 . - 0 ID=cds-OFO28927.1;Parent=gene-HMPREF3052_04900;Dbxref=NCBI_GP:OFO28927.1;Name=OFO28927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270788.1;locus_tag=HMPREF3052_04900;product=outer membrane protein assembly factor BamA;protein_id=OFO28927.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 18308 19648 . - . ID=gene-HMPREF3052_04905;Name=HMPREF3052_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04905 GCA_001815685.1|KV821625.1 Protein Homology CDS 18308 19648 . - 0 ID=cds-OFO28928.1;Parent=gene-HMPREF3052_04905;Dbxref=NCBI_GP:OFO28928.1;Name=OFO28928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681697.1;locus_tag=HMPREF3052_04905;product=RIP metalloprotease RseP;protein_id=OFO28928.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 19780 20961 . - . ID=gene-HMPREF3052_04910;Name=HMPREF3052_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04910 GCA_001815685.1|KV821625.1 Protein Homology CDS 19780 20961 . - 0 ID=cds-OFO28934.1;Parent=gene-HMPREF3052_04910;Dbxref=NCBI_GP:OFO28934.1;Name=OFO28934.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519123.1;locus_tag=HMPREF3052_04910;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=OFO28934.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 21079 21828 . - . ID=gene-HMPREF3052_04915;Name=HMPREF3052_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04915 GCA_001815685.1|KV821625.1 Protein Homology CDS 21079 21828 . - 0 ID=cds-OFO28935.1;Parent=gene-HMPREF3052_04915;Dbxref=NCBI_GP:OFO28935.1;Name=OFO28935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747899.1;locus_tag=HMPREF3052_04915;product=hypothetical protein;protein_id=OFO28935.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 21862 22656 . - . ID=gene-HMPREF3052_04920;Name=HMPREF3052_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04920 GCA_001815685.1|KV821625.1 Protein Homology CDS 21862 22656 . - 0 ID=cds-OFO28929.1;Parent=gene-HMPREF3052_04920;Dbxref=NCBI_GP:OFO28929.1;Name=OFO28929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519125.1;locus_tag=HMPREF3052_04920;product=phosphatidate cytidylyltransferase;protein_id=OFO28929.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 22662 23408 . - . ID=gene-HMPREF3052_04925;Name=HMPREF3052_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04925 GCA_001815685.1|KV821625.1 Protein Homology CDS 22662 23408 . - 0 ID=cds-OFO28930.1;Parent=gene-HMPREF3052_04925;Dbxref=NCBI_GP:OFO28930.1;Name=OFO28930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270792.1;locus_tag=HMPREF3052_04925;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=OFO28930.1;transl_table=11 GCA_001815685.1|KV821625.1 Genbank gene 23466 24023 . - . ID=gene-HMPREF3052_04930;Name=HMPREF3052_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04930 GCA_001815685.1|KV821625.1 Protein Homology CDS 23466 24023 . - 0 ID=cds-OFO28931.1;Parent=gene-HMPREF3052_04930;Dbxref=NCBI_GP:OFO28931.1;Name=OFO28931.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389871.1;locus_tag=HMPREF3052_04930;product=ribosome recycling factor;protein_id=OFO28931.1;transl_table=11 ##sequence-region KV821626.1 1 154080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821626.1 Genbank region 1 154080 . + . ID=KV821626.1:1..154080;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821626.1 Genbank gene 101 2377 . - . ID=gene-HMPREF3052_04935;Name=HMPREF3052_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04935 GCA_001815685.1|KV821626.1 Protein Homology CDS 101 2377 . - 0 ID=cds-OFO28776.1;Parent=gene-HMPREF3052_04935;Dbxref=NCBI_GP:OFO28776.1;Name=OFO28776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449127.1;locus_tag=HMPREF3052_04935;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=OFO28776.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 2467 3348 . - . ID=gene-HMPREF3052_04940;Name=HMPREF3052_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04940 GCA_001815685.1|KV821626.1 Protein Homology CDS 2467 3348 . - 0 ID=cds-OFO28777.1;Parent=gene-HMPREF3052_04940;Dbxref=NCBI_GP:OFO28777.1;Name=OFO28777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745556.1;locus_tag=HMPREF3052_04940;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=OFO28777.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 3521 3718 . - . ID=gene-HMPREF3052_04945;Name=HMPREF3052_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04945 GCA_001815685.1|KV821626.1 Protein Homology CDS 3521 3718 . - 0 ID=cds-OFO28778.1;Parent=gene-HMPREF3052_04945;Dbxref=NCBI_GP:OFO28778.1;Name=OFO28778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284930.1;locus_tag=HMPREF3052_04945;product=Fe-S assembly protein IscX;protein_id=OFO28778.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 4018 4635 . + . ID=gene-HMPREF3052_04950;Name=HMPREF3052_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04950 GCA_001815685.1|KV821626.1 Protein Homology CDS 4018 4635 . + 0 ID=cds-OFO28779.1;Parent=gene-HMPREF3052_04950;Dbxref=NCBI_GP:OFO28779.1;Name=OFO28779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519248.1;locus_tag=HMPREF3052_04950;product=hypothetical protein;protein_id=OFO28779.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 4712 5053 . - . ID=gene-HMPREF3052_04955;Name=HMPREF3052_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04955 GCA_001815685.1|KV821626.1 Protein Homology CDS 4712 5053 . - 0 ID=cds-OFO28780.1;Parent=gene-HMPREF3052_04955;Dbxref=NCBI_GP:OFO28780.1;Name=OFO28780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012698302.1;locus_tag=HMPREF3052_04955;product=2Fe-2S ferredoxin;protein_id=OFO28780.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 5147 5509 . - . ID=gene-HMPREF3052_04960;Name=HMPREF3052_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04960 GCA_001815685.1|KV821626.1 Protein Homology CDS 5147 5509 . - 0 ID=cds-OFO28781.1;Parent=gene-HMPREF3052_04960;Dbxref=NCBI_GP:OFO28781.1;Name=OFO28781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675349.1;locus_tag=HMPREF3052_04960;product=hypothetical protein;protein_id=OFO28781.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 5506 6135 . - . ID=gene-HMPREF3052_04965;Name=HMPREF3052_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04965 GCA_001815685.1|KV821626.1 Protein Homology CDS 5506 6135 . - 0 ID=cds-OFO28782.1;Parent=gene-HMPREF3052_04965;Dbxref=NCBI_GP:OFO28782.1;Name=OFO28782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686030.1;locus_tag=HMPREF3052_04965;product=hypothetical protein;protein_id=OFO28782.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 6218 8077 . - . ID=gene-HMPREF3052_04970;Name=HMPREF3052_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04970 GCA_001815685.1|KV821626.1 Protein Homology CDS 6218 8077 . - 0 ID=cds-OFO28783.1;Parent=gene-HMPREF3052_04970;Dbxref=NCBI_GP:OFO28783.1;Name=OFO28783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519251.1;locus_tag=HMPREF3052_04970;product=Fe-S protein assembly chaperone HscA;protein_id=OFO28783.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 8323 8694 . + . ID=gene-HMPREF3052_04975;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF3052_04975 GCA_001815685.1|KV821626.1 Protein Homology CDS 8323 8694 . + 0 ID=cds-OFO28784.1;Parent=gene-HMPREF3052_04975;Dbxref=NCBI_GP:OFO28784.1;Name=OFO28784.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686500.1;locus_tag=HMPREF3052_04975;product=30S ribosomal protein S6;protein_id=OFO28784.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 8697 8993 . + . ID=gene-HMPREF3052_04980;Name=HMPREF3052_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04980 GCA_001815685.1|KV821626.1 Protein Homology CDS 8697 8993 . + 0 ID=cds-OFO28785.1;Parent=gene-HMPREF3052_04980;Dbxref=NCBI_GP:OFO28785.1;Name=OFO28785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519253.1;locus_tag=HMPREF3052_04980;product=primosomal replication protein N;protein_id=OFO28785.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 9000 9230 . + . ID=gene-HMPREF3052_04985;Name=HMPREF3052_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04985 GCA_001815685.1|KV821626.1 Protein Homology CDS 9000 9230 . + 0 ID=cds-OFO28786.1;Parent=gene-HMPREF3052_04985;Dbxref=NCBI_GP:OFO28786.1;Name=OFO28786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009120066.1;locus_tag=HMPREF3052_04985;product=30S ribosomal protein S18;protein_id=OFO28786.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 9247 9699 . + . ID=gene-HMPREF3052_04990;Name=HMPREF3052_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04990 GCA_001815685.1|KV821626.1 Protein Homology CDS 9247 9699 . + 0 ID=cds-OFO28787.1;Parent=gene-HMPREF3052_04990;Dbxref=NCBI_GP:OFO28787.1;Name=OFO28787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743490.1;locus_tag=HMPREF3052_04990;product=50S ribosomal protein L9;protein_id=OFO28787.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 9908 10987 . + . ID=gene-HMPREF3052_04995;Name=HMPREF3052_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_04995 GCA_001815685.1|KV821626.1 Protein Homology CDS 9908 10987 . + 0 ID=cds-OFO28788.1;Parent=gene-HMPREF3052_04995;Dbxref=NCBI_GP:OFO28788.1;Name=OFO28788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519254.1;locus_tag=HMPREF3052_04995;product=lytic murein transglycosylase B;protein_id=OFO28788.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 11048 11761 . - . ID=gene-HMPREF3052_05000;Name=HMPREF3052_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05000 GCA_001815685.1|KV821626.1 Protein Homology CDS 11048 11761 . - 0 ID=cds-OFO28814.1;Parent=gene-HMPREF3052_05000;Dbxref=NCBI_GP:OFO28814.1;Name=OFO28814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519255.1;locus_tag=HMPREF3052_05000;product=aldose epimerase;protein_id=OFO28814.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 11960 13957 . + . ID=gene-HMPREF3052_05005;Name=HMPREF3052_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05005 GCA_001815685.1|KV821626.1 Protein Homology CDS 11960 13957 . + 0 ID=cds-OFO28789.1;Parent=gene-HMPREF3052_05005;Dbxref=NCBI_GP:OFO28789.1;Name=OFO28789.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449090.1;locus_tag=HMPREF3052_05005;product=DNA polymerase III subunit gamma/tau;protein_id=OFO28789.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 14048 14383 . + . ID=gene-HMPREF3052_05010;Name=HMPREF3052_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05010 GCA_001815685.1|KV821626.1 Protein Homology CDS 14048 14383 . + 0 ID=cds-OFO28790.1;Parent=gene-HMPREF3052_05010;Dbxref=NCBI_GP:OFO28790.1;Name=OFO28790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173318.1;locus_tag=HMPREF3052_05010;product=nucleoid-associated protein;protein_id=OFO28790.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 14923 14998 . - . ID=gene-HMPREF3052_05015;Name=HMPREF3052_05015;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_05015 GCA_001815685.1|KV821626.1 tRNAscan-SE tRNA 14923 14998 . - . ID=rna-HMPREF3052_05015;Parent=gene-HMPREF3052_05015;anticodon=(pos:complement(14963..14965));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_05015;product=tRNA-Asn GCA_001815685.1|KV821626.1 tRNAscan-SE exon 14923 14998 . - . ID=exon-HMPREF3052_05015-1;Parent=rna-HMPREF3052_05015;anticodon=(pos:complement(14963..14965));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_05015;product=tRNA-Asn GCA_001815685.1|KV821626.1 Genbank gene 15138 15629 . - . ID=gene-HMPREF3052_05020;Name=HMPREF3052_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05020 GCA_001815685.1|KV821626.1 Protein Homology CDS 15138 15629 . - 0 ID=cds-OFO28791.1;Parent=gene-HMPREF3052_05020;Dbxref=NCBI_GP:OFO28791.1;Name=OFO28791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678851.1;locus_tag=HMPREF3052_05020;product=NemA protein;protein_id=OFO28791.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 15810 16661 . + . ID=gene-HMPREF3052_05025;Name=HMPREF3052_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05025 GCA_001815685.1|KV821626.1 Protein Homology CDS 15810 16661 . + 0 ID=cds-OFO28792.1;Parent=gene-HMPREF3052_05025;Dbxref=NCBI_GP:OFO28792.1;Name=OFO28792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686074.1;locus_tag=HMPREF3052_05025;product=diaminopimelate epimerase;protein_id=OFO28792.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 16658 17260 . + . ID=gene-HMPREF3052_05030;Name=HMPREF3052_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05030 GCA_001815685.1|KV821626.1 Protein Homology CDS 16658 17260 . + 0 ID=cds-OFO28793.1;Parent=gene-HMPREF3052_05030;Dbxref=NCBI_GP:OFO28793.1;Name=OFO28793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686083.1;locus_tag=HMPREF3052_05030;product=hypothetical protein;protein_id=OFO28793.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 17330 18298 . + . ID=gene-HMPREF3052_05035;Name=HMPREF3052_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05035 GCA_001815685.1|KV821626.1 Protein Homology CDS 17330 18298 . + 0 ID=cds-OFO28794.1;Parent=gene-HMPREF3052_05035;Dbxref=NCBI_GP:OFO28794.1;Name=OFO28794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745585.1;locus_tag=HMPREF3052_05035;product=cysteine synthase A;protein_id=OFO28794.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 18444 18953 . + . ID=gene-HMPREF3052_05040;Name=HMPREF3052_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05040 GCA_001815685.1|KV821626.1 Protein Homology CDS 18444 18953 . + 0 ID=cds-OFO28795.1;Parent=gene-HMPREF3052_05040;Dbxref=NCBI_GP:OFO28795.1;Name=OFO28795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010358754.1;locus_tag=HMPREF3052_05040;product=prokaryotic membrane lipolipid attachment site family protein;protein_id=OFO28795.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 19038 19421 . - . ID=gene-HMPREF3052_05045;Name=HMPREF3052_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05045 GCA_001815685.1|KV821626.1 Protein Homology CDS 19038 19421 . - 0 ID=cds-OFO28796.1;Parent=gene-HMPREF3052_05045;Dbxref=NCBI_GP:OFO28796.1;Name=OFO28796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685957.1;locus_tag=HMPREF3052_05045;product=DNA-binding protein;protein_id=OFO28796.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 19629 19901 . + . ID=gene-HMPREF3052_05050;Name=HMPREF3052_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05050 GCA_001815685.1|KV821626.1 Protein Homology CDS 19629 19901 . + 0 ID=cds-OFO28797.1;Parent=gene-HMPREF3052_05050;Dbxref=NCBI_GP:OFO28797.1;Name=OFO28797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214440.1;locus_tag=HMPREF3052_05050;product=hypothetical protein;protein_id=OFO28797.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 20529 20906 . + . ID=gene-HMPREF3052_05055;Name=HMPREF3052_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05055 GCA_001815685.1|KV821626.1 Protein Homology CDS 20529 20906 . + 0 ID=cds-OFO28798.1;Parent=gene-HMPREF3052_05055;Dbxref=NCBI_GP:OFO28798.1;Name=OFO28798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675077.1;locus_tag=HMPREF3052_05055;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=OFO28798.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 20900 21241 . + . ID=gene-HMPREF3052_05060;Name=HMPREF3052_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05060 GCA_001815685.1|KV821626.1 Protein Homology CDS 20900 21241 . + 0 ID=cds-OFO28799.1;Parent=gene-HMPREF3052_05060;Dbxref=NCBI_GP:OFO28799.1;Name=OFO28799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272849.1;locus_tag=HMPREF3052_05060;product=succinate dehydrogenase;protein_id=OFO28799.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 21244 23007 . + . ID=gene-HMPREF3052_05065;Name=HMPREF3052_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05065 GCA_001815685.1|KV821626.1 Protein Homology CDS 21244 23007 . + 0 ID=cds-OFO28800.1;Parent=gene-HMPREF3052_05065;Dbxref=NCBI_GP:OFO28800.1;Name=OFO28800.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118267.1;locus_tag=HMPREF3052_05065;product=succinate dehydrogenase flavoprotein subunit;protein_id=OFO28800.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 23127 23834 . + . ID=gene-HMPREF3052_05070;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=HMPREF3052_05070 GCA_001815685.1|KV821626.1 Protein Homology CDS 23127 23834 . + 0 ID=cds-OFO28801.1;Parent=gene-HMPREF3052_05070;Dbxref=NCBI_GP:OFO28801.1;Name=OFO28801.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002253935.1;locus_tag=HMPREF3052_05070;product=succinate dehydrogenase iron-sulfur subunit;protein_id=OFO28801.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 23838 24086 . + . ID=gene-HMPREF3052_05075;Name=HMPREF3052_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05075 GCA_001815685.1|KV821626.1 Protein Homology CDS 23838 24086 . + 0 ID=cds-OFO28802.1;Parent=gene-HMPREF3052_05075;Dbxref=NCBI_GP:OFO28802.1;Name=OFO28802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675083.1;locus_tag=HMPREF3052_05075;product=hypothetical protein;protein_id=OFO28802.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 24211 25494 . + . ID=gene-HMPREF3052_05080;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=HMPREF3052_05080 GCA_001815685.1|KV821626.1 Protein Homology CDS 24211 25494 . + 0 ID=cds-OFO28803.1;Parent=gene-HMPREF3052_05080;Dbxref=NCBI_GP:OFO28803.1;Name=OFO28803.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116987.1;locus_tag=HMPREF3052_05080;product=citrate (Si)-synthase;protein_id=OFO28803.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 25704 28532 . + . ID=gene-HMPREF3052_05085;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=HMPREF3052_05085 GCA_001815685.1|KV821626.1 Protein Homology CDS 25704 28532 . + 0 ID=cds-OFO28804.1;Parent=gene-HMPREF3052_05085;Dbxref=NCBI_GP:OFO28804.1;Name=OFO28804.1;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;gbkey=CDS;gene=sucA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581109.1;locus_tag=HMPREF3052_05085;product=2-oxoglutarate dehydrogenase subunit E1;protein_id=OFO28804.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 28632 29813 . + . ID=gene-HMPREF3052_05090;Name=HMPREF3052_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05090 GCA_001815685.1|KV821626.1 Protein Homology CDS 28632 29813 . + 0 ID=cds-OFO28805.1;Parent=gene-HMPREF3052_05090;Dbxref=NCBI_GP:OFO28805.1;Name=OFO28805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686085.1;locus_tag=HMPREF3052_05090;product=dihydrolipoamide succinyltransferase;protein_id=OFO28805.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 30073 31506 . + . ID=gene-HMPREF3052_05095;Name=HMPREF3052_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05095 GCA_001815685.1|KV821626.1 Protein Homology CDS 30073 31506 . + 0 ID=cds-OFO28806.1;Parent=gene-HMPREF3052_05095;Dbxref=NCBI_GP:OFO28806.1;Name=OFO28806.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745605.1;locus_tag=HMPREF3052_05095;product=dihydrolipoyl dehydrogenase;protein_id=OFO28806.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 31631 31918 . + . ID=gene-HMPREF3052_05100;Name=HMPREF3052_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05100 GCA_001815685.1|KV821626.1 Protein Homology CDS 31631 31918 . + 0 ID=cds-OFO28807.1;Parent=gene-HMPREF3052_05100;Dbxref=NCBI_GP:OFO28807.1;Name=OFO28807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753423.1;locus_tag=HMPREF3052_05100;product=hypothetical protein;protein_id=OFO28807.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 31990 33156 . + . ID=gene-HMPREF3052_05105;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=HMPREF3052_05105 GCA_001815685.1|KV821626.1 Protein Homology CDS 31990 33156 . + 0 ID=cds-OFO28808.1;Parent=gene-HMPREF3052_05105;Dbxref=NCBI_GP:OFO28808.1;Name=OFO28808.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686088.1;locus_tag=HMPREF3052_05105;product=succinate--CoA ligase subunit beta;protein_id=OFO28808.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 33167 34057 . + . ID=gene-HMPREF3052_05110;Name=HMPREF3052_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05110 GCA_001815685.1|KV821626.1 Protein Homology CDS 33167 34057 . + 0 ID=cds-OFO28809.1;Parent=gene-HMPREF3052_05110;Dbxref=NCBI_GP:OFO28809.1;Name=OFO28809.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016655272.1;locus_tag=HMPREF3052_05110;product=succinate--CoA ligase subunit alpha;protein_id=OFO28809.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 34250 34684 . + . ID=gene-HMPREF3052_05115;Name=HMPREF3052_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05115 GCA_001815685.1|KV821626.1 Protein Homology CDS 34250 34684 . + 0 ID=cds-OFO28810.1;Parent=gene-HMPREF3052_05115;Dbxref=NCBI_GP:OFO28810.1;Name=OFO28810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686098.1;locus_tag=HMPREF3052_05115;product=ElaB protein;protein_id=OFO28810.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 34796 35203 . + . ID=gene-HMPREF3052_05120;Name=HMPREF3052_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05120 GCA_001815685.1|KV821626.1 Protein Homology CDS 34796 35203 . + 0 ID=cds-OFO28811.1;Parent=gene-HMPREF3052_05120;Dbxref=NCBI_GP:OFO28811.1;Name=OFO28811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745620.1;locus_tag=HMPREF3052_05120;product=hypothetical protein;protein_id=OFO28811.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 35184 35450 . + . ID=gene-HMPREF3052_05125;Name=HMPREF3052_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05125 GCA_001815685.1|KV821626.1 Protein Homology CDS 35184 35450 . + 0 ID=cds-OFO28812.1;Parent=gene-HMPREF3052_05125;Dbxref=NCBI_GP:OFO28812.1;Name=OFO28812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686076.1;locus_tag=HMPREF3052_05125;product=hypothetical protein;protein_id=OFO28812.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 35676 36488 . + . ID=gene-HMPREF3052_05130;Name=HMPREF3052_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05130 GCA_001815685.1|KV821626.1 Protein Homology CDS 35676 36488 . + 0 ID=cds-OFO28813.1;Parent=gene-HMPREF3052_05130;Dbxref=NCBI_GP:OFO28813.1;Name=OFO28813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JUS3.1;locus_tag=HMPREF3052_05130;product=phosphatidylserine decarboxylase;protein_id=OFO28813.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 36697 38985 . - . ID=gene-HMPREF3052_05135;Name=HMPREF3052_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05135 GCA_001815685.1|KV821626.1 Protein Homology CDS 36697 38985 . - 0 ID=cds-OFO28759.1;Parent=gene-HMPREF3052_05135;Dbxref=NCBI_GP:OFO28759.1;Name=OFO28759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686219.1;locus_tag=HMPREF3052_05135;product=ligand-gated channel;protein_id=OFO28759.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 39205 39687 . - . ID=gene-HMPREF3052_05140;Name=HMPREF3052_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05140 GCA_001815685.1|KV821626.1 Protein Homology CDS 39205 39687 . - 0 ID=cds-OFO28760.1;Parent=gene-HMPREF3052_05140;Dbxref=NCBI_GP:OFO28760.1;Name=OFO28760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519283.1;locus_tag=HMPREF3052_05140;product=cupin;protein_id=OFO28760.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 39789 41198 . - . ID=gene-HMPREF3052_05145;Name=HMPREF3052_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05145 GCA_001815685.1|KV821626.1 Protein Homology CDS 39789 41198 . - 0 ID=cds-OFO28761.1;Parent=gene-HMPREF3052_05145;Dbxref=NCBI_GP:OFO28761.1;Name=OFO28761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270143.1;locus_tag=HMPREF3052_05145;product=aminopeptidase;protein_id=OFO28761.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 41357 42472 . + . ID=gene-HMPREF3052_05150;Name=HMPREF3052_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05150 GCA_001815685.1|KV821626.1 Protein Homology CDS 41357 42472 . + 0 ID=cds-OFO28762.1;Parent=gene-HMPREF3052_05150;Dbxref=NCBI_GP:OFO28762.1;Name=OFO28762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003697532.1;locus_tag=HMPREF3052_05150;product=LPS export ABC transporter permease LptF;protein_id=OFO28762.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 42469 43539 . + . ID=gene-HMPREF3052_05155;Name=HMPREF3052_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05155 GCA_001815685.1|KV821626.1 Protein Homology CDS 42469 43539 . + 0 ID=cds-OFO28763.1;Parent=gene-HMPREF3052_05155;Dbxref=NCBI_GP:OFO28763.1;Name=OFO28763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010358669.1;locus_tag=HMPREF3052_05155;product=LPS export ABC transporter permease LptG;protein_id=OFO28763.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 43683 44879 . + . ID=gene-HMPREF3052_05160;Name=HMPREF3052_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05160 GCA_001815685.1|KV821626.1 Protein Homology CDS 43683 44879 . + 0 ID=cds-OFO28770.1;Parent=gene-HMPREF3052_05160;Dbxref=NCBI_GP:OFO28770.1;Name=OFO28770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745634.1;locus_tag=HMPREF3052_05160;product=glycosyl transferase;protein_id=OFO28770.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 44924 46084 . + . ID=gene-HMPREF3052_05165;Name=HMPREF3052_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05165 GCA_001815685.1|KV821626.1 Protein Homology CDS 44924 46084 . + 0 ID=cds-OFO28764.1;Parent=gene-HMPREF3052_05165;Dbxref=NCBI_GP:OFO28764.1;Name=OFO28764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519289.1;locus_tag=HMPREF3052_05165;product=GTPase HflX;protein_id=OFO28764.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 46638 49124 . + . ID=gene-HMPREF3052_05170;Name=HMPREF3052_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05170 GCA_001815685.1|KV821626.1 Protein Homology CDS 46638 49124 . + 0 ID=cds-OFO28765.1;Parent=gene-HMPREF3052_05170;Dbxref=NCBI_GP:OFO28765.1;Name=OFO28765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745637.1;locus_tag=HMPREF3052_05170;product=ATPase P;protein_id=OFO28765.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 49162 49602 . + . ID=gene-HMPREF3052_05175;Name=HMPREF3052_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05175 GCA_001815685.1|KV821626.1 Protein Homology CDS 49162 49602 . + 0 ID=cds-OFO28766.1;Parent=gene-HMPREF3052_05175;Dbxref=NCBI_GP:OFO28766.1;Name=OFO28766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745639.1;locus_tag=HMPREF3052_05175;product=DNA polymerase III subunit chi;protein_id=OFO28766.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 49682 50902 . - . ID=gene-HMPREF3052_05180;Name=HMPREF3052_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05180 GCA_001815685.1|KV821626.1 Protein Homology CDS 49682 50902 . - 0 ID=cds-OFO28767.1;Parent=gene-HMPREF3052_05180;Dbxref=NCBI_GP:OFO28767.1;Name=OFO28767.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%2C in Bacillus%2C lysine sensitive%3B regulated by response to starvation.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519299.1;locus_tag=HMPREF3052_05180;product=aspartate kinase;protein_id=OFO28767.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 51074 51802 . - . ID=gene-HMPREF3052_05185;Name=HMPREF3052_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05185 GCA_001815685.1|KV821626.1 Protein Homology CDS 51074 51802 . - 0 ID=cds-OFO28768.1;Parent=gene-HMPREF3052_05185;Dbxref=NCBI_GP:OFO28768.1;Name=OFO28768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686003.1;locus_tag=HMPREF3052_05185;product=ribonuclease PH;protein_id=OFO28768.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 51974 52828 . + . ID=gene-HMPREF3052_05190;Name=HMPREF3052_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05190 GCA_001815685.1|KV821626.1 Protein Homology CDS 51974 52828 . + 0 ID=cds-OFO28771.1;Parent=gene-HMPREF3052_05190;Dbxref=NCBI_GP:OFO28771.1;Name=OFO28771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678779.1;locus_tag=HMPREF3052_05190;product=hypothetical protein;protein_id=OFO28771.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 53034 53984 . + . ID=gene-HMPREF3052_05195;Name=HMPREF3052_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05195 GCA_001815685.1|KV821626.1 Protein Homology CDS 53034 53984 . + 0 ID=cds-OFO28769.1;Parent=gene-HMPREF3052_05195;Dbxref=NCBI_GP:OFO28769.1;Name=OFO28769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686472.1;locus_tag=HMPREF3052_05195;product=bile acid:sodium symporter;protein_id=OFO28769.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 54118 54888 . + . ID=gene-HMPREF3052_05200;Name=HMPREF3052_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05200 GCA_001815685.1|KV821626.1 Protein Homology CDS 54118 54888 . + 0 ID=cds-OFO28772.1;Parent=gene-HMPREF3052_05200;Dbxref=NCBI_GP:OFO28772.1;Name=OFO28772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745661.1;locus_tag=HMPREF3052_05200;product=hypothetical protein;protein_id=OFO28772.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 55065 56660 . - . ID=gene-HMPREF3052_05205;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=HMPREF3052_05205 GCA_001815685.1|KV821626.1 Protein Homology CDS 55065 56660 . - 0 ID=cds-OFO28684.1;Parent=gene-HMPREF3052_05205;Dbxref=NCBI_GP:OFO28684.1;Name=OFO28684.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342770.1;locus_tag=HMPREF3052_05205;product=peptide chain release factor 3;protein_id=OFO28684.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 56874 58016 . - . ID=gene-HMPREF3052_05210;Name=HMPREF3052_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05210 GCA_001815685.1|KV821626.1 Protein Homology CDS 56874 58016 . - 0 ID=cds-OFO28685.1;Parent=gene-HMPREF3052_05210;Dbxref=NCBI_GP:OFO28685.1;Name=OFO28685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678768.1;locus_tag=HMPREF3052_05210;product=NADH-dependent flavin oxidoreductase;protein_id=OFO28685.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 58135 59199 . - . ID=gene-HMPREF3052_05215;Name=HMPREF3052_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05215 GCA_001815685.1|KV821626.1 Protein Homology CDS 58135 59199 . - 0 ID=cds-OFO28686.1;Parent=gene-HMPREF3052_05215;Dbxref=NCBI_GP:OFO28686.1;Name=OFO28686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273070.1;locus_tag=HMPREF3052_05215;product=butanediol dehydrogenase;protein_id=OFO28686.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 59436 60494 . - . ID=gene-HMPREF3052_05220;Name=HMPREF3052_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05220 GCA_001815685.1|KV821626.1 Protein Homology CDS 59436 60494 . - 0 ID=cds-OFO28687.1;Parent=gene-HMPREF3052_05220;Dbxref=NCBI_GP:OFO28687.1;Name=OFO28687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678764.1;locus_tag=HMPREF3052_05220;product=deacetylase;protein_id=OFO28687.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 60672 60938 . + . ID=gene-HMPREF3052_05225;Name=HMPREF3052_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05225 GCA_001815685.1|KV821626.1 Protein Homology CDS 60672 60938 . + 0 ID=cds-OFO28688.1;Parent=gene-HMPREF3052_05225;Dbxref=NCBI_GP:OFO28688.1;Name=OFO28688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678762.1;locus_tag=HMPREF3052_05225;product=preprotein translocase subunit YajC;protein_id=OFO28688.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 61014 62867 . + . ID=gene-HMPREF3052_05230;Name=HMPREF3052_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05230 GCA_001815685.1|KV821626.1 Protein Homology CDS 61014 62867 . + 0 ID=cds-OFO28689.1;Parent=gene-HMPREF3052_05230;Dbxref=NCBI_GP:OFO28689.1;Name=OFO28689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519309.1;locus_tag=HMPREF3052_05230;product=preprotein translocase subunit SecD;protein_id=OFO28689.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 62871 63806 . + . ID=gene-HMPREF3052_05235;Name=HMPREF3052_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05235 GCA_001815685.1|KV821626.1 Protein Homology CDS 62871 63806 . + 0 ID=cds-OFO28690.1;Parent=gene-HMPREF3052_05235;Dbxref=NCBI_GP:OFO28690.1;Name=OFO28690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219655.1;locus_tag=HMPREF3052_05235;product=preprotein translocase subunit SecF;protein_id=OFO28690.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 64132 65013 . + . ID=gene-HMPREF3052_05240;Name=HMPREF3052_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05240 GCA_001815685.1|KV821626.1 Protein Homology CDS 64132 65013 . + 0 ID=cds-OFO28691.1;Parent=gene-HMPREF3052_05240;Dbxref=NCBI_GP:OFO28691.1;Name=OFO28691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427377.1;locus_tag=HMPREF3052_05240;product=carbohydrate kinase;protein_id=OFO28691.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 65093 65650 . - . ID=gene-HMPREF3052_05245;Name=HMPREF3052_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05245 GCA_001815685.1|KV821626.1 Protein Homology CDS 65093 65650 . - 0 ID=cds-OFO28692.1;Parent=gene-HMPREF3052_05245;Dbxref=NCBI_GP:OFO28692.1;Name=OFO28692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220495.1;locus_tag=HMPREF3052_05245;product=nitroreductase;protein_id=OFO28692.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 65761 65940 . - . ID=gene-HMPREF3052_05250;Name=HMPREF3052_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05250 GCA_001815685.1|KV821626.1 GeneMarkS+ CDS 65761 65940 . - 0 ID=cds-OFO28693.1;Parent=gene-HMPREF3052_05250;Dbxref=NCBI_GP:OFO28693.1;Name=OFO28693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05250;product=hypothetical protein;protein_id=OFO28693.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 66462 69344 . - . ID=gene-HMPREF3052_05255;Name=HMPREF3052_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05255 GCA_001815685.1|KV821626.1 Protein Homology CDS 66462 69344 . - 0 ID=cds-OFO28694.1;Parent=gene-HMPREF3052_05255;Dbxref=NCBI_GP:OFO28694.1;Name=OFO28694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519316.1;locus_tag=HMPREF3052_05255;product=translation initiation factor IF-2;protein_id=OFO28694.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 69356 70861 . - . ID=gene-HMPREF3052_05260;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF3052_05260 GCA_001815685.1|KV821626.1 Protein Homology CDS 69356 70861 . - 0 ID=cds-OFO28695.1;Parent=gene-HMPREF3052_05260;Dbxref=NCBI_GP:OFO28695.1;Name=OFO28695.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519317.1;locus_tag=HMPREF3052_05260;product=transcription termination/antitermination protein NusA;protein_id=OFO28695.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 70889 71320 . - . ID=gene-HMPREF3052_05265;Name=HMPREF3052_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05265 GCA_001815685.1|KV821626.1 Protein Homology CDS 70889 71320 . - 0 ID=cds-OFO28696.1;Parent=gene-HMPREF3052_05265;Dbxref=NCBI_GP:OFO28696.1;Name=OFO28696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685973.1;locus_tag=HMPREF3052_05265;product=ribosome maturation factor;protein_id=OFO28696.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 71664 72770 . + . ID=gene-HMPREF3052_05270;Name=HMPREF3052_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05270 GCA_001815685.1|KV821626.1 Protein Homology CDS 71664 72770 . + 0 ID=cds-OFO28697.1;Parent=gene-HMPREF3052_05270;Dbxref=NCBI_GP:OFO28697.1;Name=OFO28697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272018.1;locus_tag=HMPREF3052_05270;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=OFO28697.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 72833 74026 . - . ID=gene-HMPREF3052_05275;Name=HMPREF3052_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05275 GCA_001815685.1|KV821626.1 Protein Homology CDS 72833 74026 . - 0 ID=cds-OFO28698.1;Parent=gene-HMPREF3052_05275;Dbxref=NCBI_GP:OFO28698.1;Name=OFO28698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678737.1;locus_tag=HMPREF3052_05275;product=LD-carboxypeptidase;protein_id=OFO28698.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 74100 74498 . - . ID=gene-HMPREF3052_05280;Name=HMPREF3052_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05280 GCA_001815685.1|KV821626.1 Protein Homology CDS 74100 74498 . - 0 ID=cds-OFO28699.1;Parent=gene-HMPREF3052_05280;Dbxref=NCBI_GP:OFO28699.1;Name=OFO28699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741569.1;locus_tag=HMPREF3052_05280;product=HIT domain-containing protein;protein_id=OFO28699.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 74495 74809 . - . ID=gene-HMPREF3052_05285;Name=HMPREF3052_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05285 GCA_001815685.1|KV821626.1 Protein Homology CDS 74495 74809 . - 0 ID=cds-OFO28700.1;Parent=gene-HMPREF3052_05285;Dbxref=NCBI_GP:OFO28700.1;Name=OFO28700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310955.1;locus_tag=HMPREF3052_05285;product=hypothetical protein;protein_id=OFO28700.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 74820 75257 . - . ID=gene-HMPREF3052_05290;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=HMPREF3052_05290 GCA_001815685.1|KV821626.1 Protein Homology CDS 74820 75257 . - 0 ID=cds-OFO28701.1;Parent=gene-HMPREF3052_05290;Dbxref=NCBI_GP:OFO28701.1;Name=OFO28701.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F7K9.1;locus_tag=HMPREF3052_05290;product=ribonuclease HI;protein_id=OFO28701.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 75377 75766 . + . ID=gene-HMPREF3052_05295;Name=HMPREF3052_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05295 GCA_001815685.1|KV821626.1 Protein Homology CDS 75377 75766 . + 0 ID=cds-OFO28702.1;Parent=gene-HMPREF3052_05295;Dbxref=NCBI_GP:OFO28702.1;Name=OFO28702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678731.1;locus_tag=HMPREF3052_05295;product=helicase;protein_id=OFO28702.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 75779 76648 . + . ID=gene-HMPREF3052_05300;Name=HMPREF3052_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05300 GCA_001815685.1|KV821626.1 Protein Homology CDS 75779 76648 . + 0 ID=cds-OFO28703.1;Parent=gene-HMPREF3052_05300;Dbxref=NCBI_GP:OFO28703.1;Name=OFO28703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002246326.1;locus_tag=HMPREF3052_05300;product=tellurite resistance methyltransferase TehB;protein_id=OFO28703.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 76705 77205 . - . ID=gene-HMPREF3052_05305;Name=HMPREF3052_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05305 GCA_001815685.1|KV821626.1 Protein Homology CDS 76705 77205 . - 0 ID=cds-OFO28704.1;Parent=gene-HMPREF3052_05305;Dbxref=NCBI_GP:OFO28704.1;Name=OFO28704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519325.1;locus_tag=HMPREF3052_05305;product=phosphinothricin acetyltransferase;protein_id=OFO28704.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 77219 77755 . - . ID=gene-HMPREF3052_05310;Name=HMPREF3052_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05310 GCA_001815685.1|KV821626.1 Protein Homology CDS 77219 77755 . - 0 ID=cds-OFO28729.1;Parent=gene-HMPREF3052_05310;Dbxref=NCBI_GP:OFO28729.1;Name=OFO28729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745704.1;locus_tag=HMPREF3052_05310;product=isochorismatase;protein_id=OFO28729.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 77909 79627 . + . ID=gene-HMPREF3052_05315;Name=HMPREF3052_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05315 GCA_001815685.1|KV821626.1 Protein Homology CDS 77909 79627 . + 0 ID=cds-OFO28705.1;Parent=gene-HMPREF3052_05315;Dbxref=NCBI_GP:OFO28705.1;Name=OFO28705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273414.1;locus_tag=HMPREF3052_05315;product=arginine--tRNA ligase;protein_id=OFO28705.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 79785 80141 . - . ID=gene-HMPREF3052_05320;Name=HMPREF3052_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05320 GCA_001815685.1|KV821626.1 Protein Homology CDS 79785 80141 . - 0 ID=cds-OFO28706.1;Parent=gene-HMPREF3052_05320;Dbxref=NCBI_GP:OFO28706.1;Name=OFO28706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686136.1;locus_tag=HMPREF3052_05320;product=hypothetical protein;protein_id=OFO28706.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 80160 81050 . - . ID=gene-HMPREF3052_05325;Name=HMPREF3052_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05325 GCA_001815685.1|KV821626.1 Protein Homology CDS 80160 81050 . - 0 ID=cds-OFO28707.1;Parent=gene-HMPREF3052_05325;Dbxref=NCBI_GP:OFO28707.1;Name=OFO28707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519328.1;locus_tag=HMPREF3052_05325;product=hypothetical protein;protein_id=OFO28707.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 81225 81572 . + . ID=gene-HMPREF3052_05330;Name=HMPREF3052_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05330 GCA_001815685.1|KV821626.1 Protein Homology CDS 81225 81572 . + 0 ID=cds-OFO28708.1;Parent=gene-HMPREF3052_05330;Dbxref=NCBI_GP:OFO28708.1;Name=OFO28708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519329.1;locus_tag=HMPREF3052_05330;product=hypothetical protein;protein_id=OFO28708.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 81646 82398 . - . ID=gene-HMPREF3052_05335;Name=HMPREF3052_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05335 GCA_001815685.1|KV821626.1 Protein Homology CDS 81646 82398 . - 0 ID=cds-OFO28709.1;Parent=gene-HMPREF3052_05335;Dbxref=NCBI_GP:OFO28709.1;Name=OFO28709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678717.1;locus_tag=HMPREF3052_05335;product=CAAX protease;protein_id=OFO28709.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 82646 83002 . + . ID=gene-HMPREF3052_05340;Name=HMPREF3052_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05340 GCA_001815685.1|KV821626.1 Protein Homology CDS 82646 83002 . + 0 ID=cds-OFO28730.1;Parent=gene-HMPREF3052_05340;Dbxref=NCBI_GP:OFO28730.1;Name=OFO28730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742183.1;locus_tag=HMPREF3052_05340;product=hypothetical protein;protein_id=OFO28730.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 83053 84066 . + . ID=gene-HMPREF3052_05345;Name=HMPREF3052_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05345 GCA_001815685.1|KV821626.1 Protein Homology CDS 83053 84066 . + 0 ID=cds-OFO28710.1;Parent=gene-HMPREF3052_05345;Dbxref=NCBI_GP:OFO28710.1;Name=OFO28710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745719.1;locus_tag=HMPREF3052_05345;product=hypothetical protein;protein_id=OFO28710.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 84375 85790 . + . ID=gene-HMPREF3052_05350;Name=HMPREF3052_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05350 GCA_001815685.1|KV821626.1 Protein Homology CDS 84375 85790 . + 0 ID=cds-OFO28731.1;Parent=gene-HMPREF3052_05350;Dbxref=NCBI_GP:OFO28731.1;Name=OFO28731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678712.1;locus_tag=HMPREF3052_05350;product=hypothetical protein;protein_id=OFO28731.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 85935 86318 . + . ID=gene-HMPREF3052_05355;Name=HMPREF3052_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05355 GCA_001815685.1|KV821626.1 Protein Homology CDS 85935 86318 . + 0 ID=cds-OFO28711.1;Parent=gene-HMPREF3052_05355;Dbxref=NCBI_GP:OFO28711.1;Name=OFO28711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686184.1;locus_tag=HMPREF3052_05355;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=OFO28711.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank pseudogene 86510 88096 . + . ID=gene-HMPREF3052_05360;Name=HMPREF3052_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_05360;pseudo=true GCA_001815685.1|KV821626.1 Protein Homology CDS 86510 88096 . + 0 ID=cds-HMPREF3052_05360;Parent=gene-HMPREF3052_05360;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519341.1;locus_tag=HMPREF3052_05360;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 88164 89768 . + . ID=gene-HMPREF3052_05365;Name=HMPREF3052_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05365 GCA_001815685.1|KV821626.1 Protein Homology CDS 88164 89768 . + 0 ID=cds-OFO28712.1;Parent=gene-HMPREF3052_05365;Dbxref=NCBI_GP:OFO28712.1;Name=OFO28712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678706.1;locus_tag=HMPREF3052_05365;product=twin-arginine translocation pathway signal;protein_id=OFO28712.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 89838 90476 . - . ID=gene-HMPREF3052_05370;Name=HMPREF3052_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05370 GCA_001815685.1|KV821626.1 Protein Homology CDS 89838 90476 . - 0 ID=cds-OFO28713.1;Parent=gene-HMPREF3052_05370;Dbxref=NCBI_GP:OFO28713.1;Name=OFO28713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219106.1;locus_tag=HMPREF3052_05370;product=2-dehydro-3-deoxyphosphogluconate aldolase;protein_id=OFO28713.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 90697 92532 . - . ID=gene-HMPREF3052_05375;Name=HMPREF3052_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05375 GCA_001815685.1|KV821626.1 Protein Homology CDS 90697 92532 . - 0 ID=cds-OFO28714.1;Parent=gene-HMPREF3052_05375;Dbxref=NCBI_GP:OFO28714.1;Name=OFO28714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273524.1;locus_tag=HMPREF3052_05375;product=phosphogluconate dehydratase;protein_id=OFO28714.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 93016 94461 . + . ID=gene-HMPREF3052_05380;Name=HMPREF3052_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05380 GCA_001815685.1|KV821626.1 Protein Homology CDS 93016 94461 . + 0 ID=cds-OFO28715.1;Parent=gene-HMPREF3052_05380;Dbxref=NCBI_GP:OFO28715.1;Name=OFO28715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220804.1;locus_tag=HMPREF3052_05380;product=glucose-6-phosphate dehydrogenase;protein_id=OFO28715.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 94525 95220 . + . ID=gene-HMPREF3052_05385;Name=HMPREF3052_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05385 GCA_001815685.1|KV821626.1 Protein Homology CDS 94525 95220 . + 0 ID=cds-OFO28716.1;Parent=gene-HMPREF3052_05385;Dbxref=NCBI_GP:OFO28716.1;Name=OFO28716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312375.1;locus_tag=HMPREF3052_05385;product=6-phosphogluconolactonase;protein_id=OFO28716.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 95201 96181 . + . ID=gene-HMPREF3052_05390;Name=HMPREF3052_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05390 GCA_001815685.1|KV821626.1 Protein Homology CDS 95201 96181 . + 0 ID=cds-OFO28717.1;Parent=gene-HMPREF3052_05390;Dbxref=NCBI_GP:OFO28717.1;Name=OFO28717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270345.1;locus_tag=HMPREF3052_05390;product=glucokinase;protein_id=OFO28717.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 96259 97107 . + . ID=gene-HMPREF3052_05395;Name=HMPREF3052_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05395 GCA_001815685.1|KV821626.1 Protein Homology CDS 96259 97107 . + 0 ID=cds-OFO28718.1;Parent=gene-HMPREF3052_05395;Dbxref=NCBI_GP:OFO28718.1;Name=OFO28718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239863.1;locus_tag=HMPREF3052_05395;product=transcriptional regulator;protein_id=OFO28718.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 97251 98894 . + . ID=gene-HMPREF3052_05400;Name=HMPREF3052_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05400 GCA_001815685.1|KV821626.1 Protein Homology CDS 97251 98894 . + 0 ID=cds-OFO28719.1;Parent=gene-HMPREF3052_05400;Dbxref=NCBI_GP:OFO28719.1;Name=OFO28719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312377.1;locus_tag=HMPREF3052_05400;product=glucose-6-phosphate isomerase;protein_id=OFO28719.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 98946 100043 . - . ID=gene-HMPREF3052_05405;Name=HMPREF3052_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05405 GCA_001815685.1|KV821626.1 Protein Homology CDS 98946 100043 . - 0 ID=cds-OFO28720.1;Parent=gene-HMPREF3052_05405;Dbxref=NCBI_GP:OFO28720.1;Name=OFO28720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675858.1;locus_tag=HMPREF3052_05405;product=hypothetical protein;protein_id=OFO28720.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 100338 100952 . - . ID=gene-HMPREF3052_05410;Name=HMPREF3052_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05410 GCA_001815685.1|KV821626.1 Protein Homology CDS 100338 100952 . - 0 ID=cds-OFO28721.1;Parent=gene-HMPREF3052_05410;Dbxref=NCBI_GP:OFO28721.1;Name=OFO28721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678684.1;locus_tag=HMPREF3052_05410;product=cadmium transporter;protein_id=OFO28721.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 101264 101959 . - . ID=gene-HMPREF3052_05415;Name=HMPREF3052_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05415 GCA_001815685.1|KV821626.1 Protein Homology CDS 101264 101959 . - 0 ID=cds-OFO28722.1;Parent=gene-HMPREF3052_05415;Dbxref=NCBI_GP:OFO28722.1;Name=OFO28722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751811.1;locus_tag=HMPREF3052_05415;product=ABC transporter ATP-binding protein;protein_id=OFO28722.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 101956 102753 . - . ID=gene-HMPREF3052_05420;Name=HMPREF3052_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05420 GCA_001815685.1|KV821626.1 Protein Homology CDS 101956 102753 . - 0 ID=cds-OFO28723.1;Parent=gene-HMPREF3052_05420;Dbxref=NCBI_GP:OFO28723.1;Name=OFO28723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776012.1;locus_tag=HMPREF3052_05420;product=ABC transporter permease;protein_id=OFO28723.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 102941 104101 . - . ID=gene-HMPREF3052_05425;Name=HMPREF3052_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05425 GCA_001815685.1|KV821626.1 GeneMarkS+ CDS 102941 104101 . - 0 ID=cds-OFO28724.1;Parent=gene-HMPREF3052_05425;Dbxref=NCBI_GP:OFO28724.1;Name=OFO28724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05425;product=hypothetical protein;protein_id=OFO28724.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 104526 105503 . - . ID=gene-HMPREF3052_05430;Name=HMPREF3052_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05430 GCA_001815685.1|KV821626.1 Protein Homology CDS 104526 105503 . - 0 ID=cds-OFO28725.1;Parent=gene-HMPREF3052_05430;Dbxref=NCBI_GP:OFO28725.1;Name=OFO28725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686208.1;locus_tag=HMPREF3052_05430;product=hypothetical protein;protein_id=OFO28725.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 105562 107478 . - . ID=gene-HMPREF3052_05435;Name=HMPREF3052_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05435 GCA_001815685.1|KV821626.1 Protein Homology CDS 105562 107478 . - 0 ID=cds-OFO28726.1;Parent=gene-HMPREF3052_05435;Dbxref=NCBI_GP:OFO28726.1;Name=OFO28726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712496.1;locus_tag=HMPREF3052_05435;product=TonB-dependent receptor;protein_id=OFO28726.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 107802 109190 . + . ID=gene-HMPREF3052_05440;Name=HMPREF3052_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05440 GCA_001815685.1|KV821626.1 Protein Homology CDS 107802 109190 . + 0 ID=cds-OFO28727.1;Parent=gene-HMPREF3052_05440;Dbxref=NCBI_GP:OFO28727.1;Name=OFO28727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311574.1;locus_tag=HMPREF3052_05440;product=class II fumarate hydratase;protein_id=OFO28727.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 109241 109765 . - . ID=gene-HMPREF3052_05445;Name=HMPREF3052_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05445 GCA_001815685.1|KV821626.1 Protein Homology CDS 109241 109765 . - 0 ID=cds-OFO28728.1;Parent=gene-HMPREF3052_05445;Dbxref=NCBI_GP:OFO28728.1;Name=OFO28728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745762.1;locus_tag=HMPREF3052_05445;product=hypothetical protein;protein_id=OFO28728.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 110059 111438 . - . ID=gene-HMPREF3052_05450;Name=HMPREF3052_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05450 GCA_001815685.1|KV821626.1 Protein Homology CDS 110059 111438 . - 0 ID=cds-OFO28610.1;Parent=gene-HMPREF3052_05450;Dbxref=NCBI_GP:OFO28610.1;Name=OFO28610.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311883.1;locus_tag=HMPREF3052_05450;product=argininosuccinate lyase;protein_id=OFO28610.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 111532 112569 . + . ID=gene-HMPREF3052_05455;Name=HMPREF3052_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05455 GCA_001815685.1|KV821626.1 Protein Homology CDS 111532 112569 . + 0 ID=cds-OFO28611.1;Parent=gene-HMPREF3052_05455;Dbxref=NCBI_GP:OFO28611.1;Name=OFO28611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755259.1;locus_tag=HMPREF3052_05455;product=histidine kinase;protein_id=OFO28611.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 112770 115355 . + . ID=gene-HMPREF3052_05460;Name=HMPREF3052_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05460 GCA_001815685.1|KV821626.1 Protein Homology CDS 112770 115355 . + 0 ID=cds-OFO28612.1;Parent=gene-HMPREF3052_05460;Dbxref=NCBI_GP:OFO28612.1;Name=OFO28612.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686102.1;locus_tag=HMPREF3052_05460;product=aconitate hydratase B;protein_id=OFO28612.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 115539 116930 . - . ID=gene-HMPREF3052_05465;Name=HMPREF3052_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05465 GCA_001815685.1|KV821626.1 Protein Homology CDS 115539 116930 . - 0 ID=cds-OFO28613.1;Parent=gene-HMPREF3052_05465;Dbxref=NCBI_GP:OFO28613.1;Name=OFO28613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745770.1;locus_tag=HMPREF3052_05465;product=RNA helicase;protein_id=OFO28613.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 116963 117181 . + . ID=gene-HMPREF3052_05470;Name=HMPREF3052_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05470 GCA_001815685.1|KV821626.1 GeneMarkS+ CDS 116963 117181 . + 0 ID=cds-OFO28614.1;Parent=gene-HMPREF3052_05470;Dbxref=NCBI_GP:OFO28614.1;Name=OFO28614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05470;product=hypothetical protein;protein_id=OFO28614.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 117362 117694 . + . ID=gene-HMPREF3052_05475;Name=HMPREF3052_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05475 GCA_001815685.1|KV821626.1 Protein Homology CDS 117362 117694 . + 0 ID=cds-OFO28615.1;Parent=gene-HMPREF3052_05475;Dbxref=NCBI_GP:OFO28615.1;Name=OFO28615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685960.1;locus_tag=HMPREF3052_05475;product=hypothetical protein;protein_id=OFO28615.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 117892 119157 . - . ID=gene-HMPREF3052_05480;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF3052_05480 GCA_001815685.1|KV821626.1 Protein Homology CDS 117892 119157 . - 0 ID=cds-OFO28616.1;Parent=gene-HMPREF3052_05480;Dbxref=NCBI_GP:OFO28616.1;Name=OFO28616.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686117.1;locus_tag=HMPREF3052_05480;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=OFO28616.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 119423 120379 . + . ID=gene-HMPREF3052_05485;Name=HMPREF3052_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05485 GCA_001815685.1|KV821626.1 Protein Homology CDS 119423 120379 . + 0 ID=cds-OFO28617.1;Parent=gene-HMPREF3052_05485;Dbxref=NCBI_GP:OFO28617.1;Name=OFO28617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745776.1;locus_tag=HMPREF3052_05485;product=D-alanyl-D-alanine endopeptidase;protein_id=OFO28617.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 120488 121261 . + . ID=gene-HMPREF3052_05490;Name=HMPREF3052_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05490 GCA_001815685.1|KV821626.1 Protein Homology CDS 120488 121261 . + 0 ID=cds-OFO28618.1;Parent=gene-HMPREF3052_05490;Dbxref=NCBI_GP:OFO28618.1;Name=OFO28618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519369.1;locus_tag=HMPREF3052_05490;product=deoxyribonuclease HsdR;protein_id=OFO28618.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 121325 121819 . - . ID=gene-HMPREF3052_05495;Name=HMPREF3052_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05495 GCA_001815685.1|KV821626.1 Protein Homology CDS 121325 121819 . - 0 ID=cds-OFO28648.1;Parent=gene-HMPREF3052_05495;Dbxref=NCBI_GP:OFO28648.1;Name=OFO28648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757153.1;locus_tag=HMPREF3052_05495;product=hypothetical protein;protein_id=OFO28648.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 121933 122130 . + . ID=gene-HMPREF3052_05500;Name=HMPREF3052_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05500 GCA_001815685.1|KV821626.1 Protein Homology CDS 121933 122130 . + 0 ID=cds-OFO28619.1;Parent=gene-HMPREF3052_05500;Dbxref=NCBI_GP:OFO28619.1;Name=OFO28619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686023.1;locus_tag=HMPREF3052_05500;product=hypothetical protein;protein_id=OFO28619.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 122134 122490 . + . ID=gene-HMPREF3052_05505;Name=HMPREF3052_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05505 GCA_001815685.1|KV821626.1 Protein Homology CDS 122134 122490 . + 0 ID=cds-OFO28620.1;Parent=gene-HMPREF3052_05505;Dbxref=NCBI_GP:OFO28620.1;Name=OFO28620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519372.1;locus_tag=HMPREF3052_05505;product=hypothetical protein;protein_id=OFO28620.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 122497 123531 . - . ID=gene-HMPREF3052_05510;Name=HMPREF3052_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05510 GCA_001815685.1|KV821626.1 Protein Homology CDS 122497 123531 . - 0 ID=cds-OFO28621.1;Parent=gene-HMPREF3052_05510;Dbxref=NCBI_GP:OFO28621.1;Name=OFO28621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273527.1;locus_tag=HMPREF3052_05510;product=A/G-specific adenine glycosylase;protein_id=OFO28621.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank pseudogene 123694 124735 . + . ID=gene-HMPREF3052_05515;Name=HMPREF3052_05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_05515;pseudo=true GCA_001815685.1|KV821626.1 Protein Homology CDS 123694 124735 . + 0 ID=cds-HMPREF3052_05515;Parent=gene-HMPREF3052_05515;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225132.1;locus_tag=HMPREF3052_05515;product=alcohol dehydrogenase;pseudo=true;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 124805 125887 . - . ID=gene-HMPREF3052_05520;Name=HMPREF3052_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05520 GCA_001815685.1|KV821626.1 Protein Homology CDS 124805 125887 . - 0 ID=cds-OFO28622.1;Parent=gene-HMPREF3052_05520;Dbxref=NCBI_GP:OFO28622.1;Name=OFO28622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777235.1;locus_tag=HMPREF3052_05520;product=tRNA (uracil-5-)-methyltransferase;protein_id=OFO28622.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 126005 127507 . - . ID=gene-HMPREF3052_05525;Name=HMPREF3052_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05525 GCA_001815685.1|KV821626.1 Protein Homology CDS 126005 127507 . - 0 ID=cds-OFO28623.1;Parent=gene-HMPREF3052_05525;Dbxref=NCBI_GP:OFO28623.1;Name=OFO28623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709725.1;locus_tag=HMPREF3052_05525;product=phosphate acetyltransferase;protein_id=OFO28623.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 127656 128732 . - . ID=gene-HMPREF3052_05530;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF3052_05530 GCA_001815685.1|KV821626.1 Protein Homology CDS 127656 128732 . - 0 ID=cds-OFO28624.1;Parent=gene-HMPREF3052_05530;Dbxref=NCBI_GP:OFO28624.1;Name=OFO28624.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003790927.1;locus_tag=HMPREF3052_05530;product=peptide chain release factor 1;protein_id=OFO28624.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 128889 130157 . - . ID=gene-HMPREF3052_05535;Name=HMPREF3052_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05535 GCA_001815685.1|KV821626.1 Protein Homology CDS 128889 130157 . - 0 ID=cds-OFO28625.1;Parent=gene-HMPREF3052_05535;Dbxref=NCBI_GP:OFO28625.1;Name=OFO28625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686173.1;locus_tag=HMPREF3052_05535;product=hypothetical protein;protein_id=OFO28625.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 130445 131212 . - . ID=gene-HMPREF3052_05540;Name=HMPREF3052_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05540 GCA_001815685.1|KV821626.1 Protein Homology CDS 130445 131212 . - 0 ID=cds-OFO28626.1;Parent=gene-HMPREF3052_05540;Dbxref=NCBI_GP:OFO28626.1;Name=OFO28626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679921.1;locus_tag=HMPREF3052_05540;product=hydrolase;protein_id=OFO28626.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 131226 132209 . - . ID=gene-HMPREF3052_05545;Name=HMPREF3052_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05545 GCA_001815685.1|KV821626.1 Protein Homology CDS 131226 132209 . - 0 ID=cds-OFO28627.1;Parent=gene-HMPREF3052_05545;Dbxref=NCBI_GP:OFO28627.1;Name=OFO28627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216654.1;locus_tag=HMPREF3052_05545;product=L-asparaginase;protein_id=OFO28627.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 132276 132938 . - . ID=gene-HMPREF3052_05550;Name=HMPREF3052_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05550 GCA_001815685.1|KV821626.1 Protein Homology CDS 132276 132938 . - 0 ID=cds-OFO28628.1;Parent=gene-HMPREF3052_05550;Dbxref=NCBI_GP:OFO28628.1;Name=OFO28628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679925.1;locus_tag=HMPREF3052_05550;product=hypothetical protein;protein_id=OFO28628.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 133188 134666 . + . ID=gene-HMPREF3052_05555;Name=HMPREF3052_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05555 GCA_001815685.1|KV821626.1 Protein Homology CDS 133188 134666 . + 0 ID=cds-OFO28629.1;Parent=gene-HMPREF3052_05555;Dbxref=NCBI_GP:OFO28629.1;Name=OFO28629.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245667.1;locus_tag=HMPREF3052_05555;product=3-octaprenyl-4-hydroxybenzoate decarboxylase;protein_id=OFO28629.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 134667 134855 . + . ID=gene-HMPREF3052_05560;Name=HMPREF3052_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05560 GCA_001815685.1|KV821626.1 Protein Homology CDS 134667 134855 . + 0 ID=cds-OFO28630.1;Parent=gene-HMPREF3052_05560;Dbxref=NCBI_GP:OFO28630.1;Name=OFO28630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679930.1;locus_tag=HMPREF3052_05560;product=diacylglycerol kinase;protein_id=OFO28630.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 134934 137027 . - . ID=gene-HMPREF3052_05565;Name=HMPREF3052_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05565 GCA_001815685.1|KV821626.1 Protein Homology CDS 134934 137027 . - 0 ID=cds-OFO28631.1;Parent=gene-HMPREF3052_05565;Dbxref=NCBI_GP:OFO28631.1;Name=OFO28631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679931.1;locus_tag=HMPREF3052_05565;product=AsmA family protein;protein_id=OFO28631.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 137206 137475 . - . ID=gene-HMPREF3052_05570;Name=HMPREF3052_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05570 GCA_001815685.1|KV821626.1 Protein Homology CDS 137206 137475 . - 0 ID=cds-OFO28632.1;Parent=gene-HMPREF3052_05570;Dbxref=NCBI_GP:OFO28632.1;Name=OFO28632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958878.1;locus_tag=HMPREF3052_05570;product=30S ribosomal protein S15;protein_id=OFO28632.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 137686 138441 . - . ID=gene-HMPREF3052_05575;Name=HMPREF3052_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05575 GCA_001815685.1|KV821626.1 Protein Homology CDS 137686 138441 . - 0 ID=cds-OFO28633.1;Parent=gene-HMPREF3052_05575;Dbxref=NCBI_GP:OFO28633.1;Name=OFO28633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745813.1;locus_tag=HMPREF3052_05575;product=hypothetical protein;protein_id=OFO28633.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 138616 139773 . - . ID=gene-HMPREF3052_05580;Name=HMPREF3052_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05580 GCA_001815685.1|KV821626.1 Protein Homology CDS 138616 139773 . - 0 ID=cds-OFO28634.1;Parent=gene-HMPREF3052_05580;Dbxref=NCBI_GP:OFO28634.1;Name=OFO28634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002254502.1;locus_tag=HMPREF3052_05580;product=nitrite reductase%2C copper-containing;protein_id=OFO28634.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 140173 142428 . + . ID=gene-HMPREF3052_05585;Name=HMPREF3052_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05585 GCA_001815685.1|KV821626.1 Protein Homology CDS 140173 142428 . + 0 ID=cds-OFO28635.1;Parent=gene-HMPREF3052_05585;Dbxref=NCBI_GP:OFO28635.1;Name=OFO28635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270995.1;locus_tag=HMPREF3052_05585;product=nitric oxide reductase large subunit;protein_id=OFO28635.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 142524 143423 . + . ID=gene-HMPREF3052_05590;Name=HMPREF3052_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05590 GCA_001815685.1|KV821626.1 Protein Homology CDS 142524 143423 . + 0 ID=cds-OFO28636.1;Parent=gene-HMPREF3052_05590;Dbxref=NCBI_GP:OFO28636.1;Name=OFO28636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580280.1;locus_tag=HMPREF3052_05590;product=ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=OFO28636.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 143650 144387 . + . ID=gene-HMPREF3052_05595;Name=HMPREF3052_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05595 GCA_001815685.1|KV821626.1 Protein Homology CDS 143650 144387 . + 0 ID=cds-OFO28637.1;Parent=gene-HMPREF3052_05595;Dbxref=NCBI_GP:OFO28637.1;Name=OFO28637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519393.1;locus_tag=HMPREF3052_05595;product=hypothetical protein;protein_id=OFO28637.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 144433 144993 . - . ID=gene-HMPREF3052_05600;Name=HMPREF3052_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05600 GCA_001815685.1|KV821626.1 Protein Homology CDS 144433 144993 . - 0 ID=cds-OFO28638.1;Parent=gene-HMPREF3052_05600;Dbxref=NCBI_GP:OFO28638.1;Name=OFO28638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174001.1;locus_tag=HMPREF3052_05600;product=adenine phosphoribosyltransferase;protein_id=OFO28638.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 145162 145779 . + . ID=gene-HMPREF3052_05605;Name=HMPREF3052_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05605 GCA_001815685.1|KV821626.1 Protein Homology CDS 145162 145779 . + 0 ID=cds-OFO28639.1;Parent=gene-HMPREF3052_05605;Dbxref=NCBI_GP:OFO28639.1;Name=OFO28639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JT96.1;locus_tag=HMPREF3052_05605;product=guanylate kinase;protein_id=OFO28639.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 145832 146038 . + . ID=gene-HMPREF3052_05610;Name=HMPREF3052_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05610 GCA_001815685.1|KV821626.1 Protein Homology CDS 145832 146038 . + 0 ID=cds-OFO28640.1;Parent=gene-HMPREF3052_05610;Dbxref=NCBI_GP:OFO28640.1;Name=OFO28640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66724.1;locus_tag=HMPREF3052_05610;product=DNA-directed RNA polymerase subunit omega;protein_id=OFO28640.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 146143 148299 . + . ID=gene-HMPREF3052_05615;Name=HMPREF3052_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05615 GCA_001815685.1|KV821626.1 Protein Homology CDS 146143 148299 . + 0 ID=cds-OFO28641.1;Parent=gene-HMPREF3052_05615;Dbxref=NCBI_GP:OFO28641.1;Name=OFO28641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686179.1;locus_tag=HMPREF3052_05615;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=OFO28641.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 148654 149115 . - . ID=gene-HMPREF3052_05620;Name=HMPREF3052_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05620 GCA_001815685.1|KV821626.1 Protein Homology CDS 148654 149115 . - 0 ID=cds-OFO28642.1;Parent=gene-HMPREF3052_05620;Dbxref=NCBI_GP:OFO28642.1;Name=OFO28642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682288.1;locus_tag=HMPREF3052_05620;product=recombinase RecX;protein_id=OFO28642.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 149216 149929 . - . ID=gene-HMPREF3052_05625;Name=HMPREF3052_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05625 GCA_001815685.1|KV821626.1 Protein Homology CDS 149216 149929 . - 0 ID=cds-OFO28643.1;Parent=gene-HMPREF3052_05625;Dbxref=NCBI_GP:OFO28643.1;Name=OFO28643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686200.1;locus_tag=HMPREF3052_05625;product=phosphoglycolate phosphatase;protein_id=OFO28643.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 150351 151616 . + . ID=gene-HMPREF3052_05630;Name=HMPREF3052_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05630 GCA_001815685.1|KV821626.1 Protein Homology CDS 150351 151616 . + 0 ID=cds-OFO28644.1;Parent=gene-HMPREF3052_05630;Dbxref=NCBI_GP:OFO28644.1;Name=OFO28644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312236.1;locus_tag=HMPREF3052_05630;product=glutamate dehydrogenase;protein_id=OFO28644.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 151777 152592 . + . ID=gene-HMPREF3052_05635;Name=HMPREF3052_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05635 GCA_001815685.1|KV821626.1 Protein Homology CDS 151777 152592 . + 0 ID=cds-OFO28645.1;Parent=gene-HMPREF3052_05635;Dbxref=NCBI_GP:OFO28645.1;Name=OFO28645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682282.1;locus_tag=HMPREF3052_05635;product=peptidylprolyl isomerase;protein_id=OFO28645.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 152689 153315 . + . ID=gene-HMPREF3052_05640;Name=HMPREF3052_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05640 GCA_001815685.1|KV821626.1 Protein Homology CDS 152689 153315 . + 0 ID=cds-OFO28646.1;Parent=gene-HMPREF3052_05640;Dbxref=NCBI_GP:OFO28646.1;Name=OFO28646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312194.1;locus_tag=HMPREF3052_05640;product=phosphoribosylglycinamide formyltransferase;protein_id=OFO28646.1;transl_table=11 GCA_001815685.1|KV821626.1 Genbank gene 153346 154014 . + . ID=gene-HMPREF3052_05645;Name=HMPREF3052_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05645 GCA_001815685.1|KV821626.1 Protein Homology CDS 153346 154014 . + 0 ID=cds-OFO28647.1;Parent=gene-HMPREF3052_05645;Dbxref=NCBI_GP:OFO28647.1;Name=OFO28647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684102.1;locus_tag=HMPREF3052_05645;product=hypothetical protein;protein_id=OFO28647.1;transl_table=11 ##sequence-region KV821627.1 1 310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821627.1 Genbank region 1 310 . + . ID=KV821627.1:1..310;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821627.1 Genbank pseudogene 1 310 . - . ID=gene-HMPREF3052_05650;Name=HMPREF3052_05650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_05650;pseudo=true GCA_001815685.1|KV821627.1 GeneMarkS+ CDS 1 310 . - 2 ID=cds-HMPREF3052_05650;Parent=gene-HMPREF3052_05650;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05650;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821628.1 1 612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821628.1 Genbank region 1 612 . + . ID=KV821628.1:1..612;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821628.1 Genbank pseudogene 58 582 . + . ID=gene-HMPREF3052_05655;Name=HMPREF3052_05655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_05655;pseudo=true GCA_001815685.1|KV821628.1 Protein Homology CDS 58 582 . + 0 ID=cds-HMPREF3052_05655;Parent=gene-HMPREF3052_05655;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway%3B incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519560.1;locus_tag=HMPREF3052_05655;product=glutamate-1-semialdehyde aminotransferase;pseudo=true;transl_table=11 ##sequence-region KV821629.1 1 42688 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821629.1 Genbank region 1 42688 . + . ID=KV821629.1:1..42688;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821629.1 Genbank gene 96 902 . + . ID=gene-HMPREF3052_05660;Name=HMPREF3052_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05660 GCA_001815685.1|KV821629.1 Protein Homology CDS 96 902 . + 0 ID=cds-OFO28519.1;Parent=gene-HMPREF3052_05660;Dbxref=NCBI_GP:OFO28519.1;Name=OFO28519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270762.1;locus_tag=HMPREF3052_05660;product=ATP-dependent DNA ligase;protein_id=OFO28519.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 998 1648 . - . ID=gene-HMPREF3052_05665;Name=HMPREF3052_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05665 GCA_001815685.1|KV821629.1 Protein Homology CDS 998 1648 . - 0 ID=cds-OFO28511.1;Parent=gene-HMPREF3052_05665;Dbxref=NCBI_GP:OFO28511.1;Name=OFO28511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519035.1;locus_tag=HMPREF3052_05665;product=HAD family hydrolase;protein_id=OFO28511.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 1660 2646 . - . ID=gene-HMPREF3052_05670;Name=HMPREF3052_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05670 GCA_001815685.1|KV821629.1 Protein Homology CDS 1660 2646 . - 0 ID=cds-OFO28512.1;Parent=gene-HMPREF3052_05670;Dbxref=NCBI_GP:OFO28512.1;Name=OFO28512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748049.1;locus_tag=HMPREF3052_05670;product=RNA pseudouridine synthase;protein_id=OFO28512.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 3161 6055 . + . ID=gene-HMPREF3052_05675;Name=HMPREF3052_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05675 GCA_001815685.1|KV821629.1 Protein Homology CDS 3161 6055 . + 0 ID=cds-OFO28513.1;Parent=gene-HMPREF3052_05675;Dbxref=NCBI_GP:OFO28513.1;Name=OFO28513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742886.1;locus_tag=HMPREF3052_05675;product=ribonuclease E;protein_id=OFO28513.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 6309 6752 . - . ID=gene-HMPREF3052_05680;Name=HMPREF3052_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05680 GCA_001815685.1|KV821629.1 Protein Homology CDS 6309 6752 . - 0 ID=cds-OFO28514.1;Parent=gene-HMPREF3052_05680;Dbxref=NCBI_GP:OFO28514.1;Name=OFO28514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519029.1;locus_tag=HMPREF3052_05680;product=mechanosensitive ion channel protein MscL;protein_id=OFO28514.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 7200 7988 . - . ID=gene-HMPREF3052_05685;Name=HMPREF3052_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05685 GCA_001815685.1|KV821629.1 Protein Homology CDS 7200 7988 . - 0 ID=cds-OFO28515.1;Parent=gene-HMPREF3052_05685;Dbxref=NCBI_GP:OFO28515.1;Name=OFO28515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679651.1;locus_tag=HMPREF3052_05685;product=enoyl-ACP reductase;protein_id=OFO28515.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 8197 10254 . + . ID=gene-HMPREF3052_05690;Name=HMPREF3052_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05690 GCA_001815685.1|KV821629.1 Protein Homology CDS 8197 10254 . + 0 ID=cds-OFO28516.1;Parent=gene-HMPREF3052_05690;Dbxref=NCBI_GP:OFO28516.1;Name=OFO28516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519026.1;locus_tag=HMPREF3052_05690;product=RNA degradosome polyphosphate kinase;protein_id=OFO28516.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 10356 12371 . + . ID=gene-HMPREF3052_05695;Name=HMPREF3052_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05695 GCA_001815685.1|KV821629.1 Protein Homology CDS 10356 12371 . + 0 ID=cds-OFO28517.1;Parent=gene-HMPREF3052_05695;Dbxref=NCBI_GP:OFO28517.1;Name=OFO28517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449508.1;locus_tag=HMPREF3052_05695;product=prolyl endopeptidase;protein_id=OFO28517.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 12769 13005 . + . ID=gene-HMPREF3052_05700;Name=HMPREF3052_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05700 GCA_001815685.1|KV821629.1 Protein Homology CDS 12769 13005 . + 0 ID=cds-OFO28518.1;Parent=gene-HMPREF3052_05700;Dbxref=NCBI_GP:OFO28518.1;Name=OFO28518.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272337.1;locus_tag=HMPREF3052_05700;product=acyl carrier protein;protein_id=OFO28518.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 13168 14415 . + . ID=gene-HMPREF3052_05705;Name=HMPREF3052_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05705 GCA_001815685.1|KV821629.1 Protein Homology CDS 13168 14415 . + 0 ID=cds-OFO28520.1;Parent=gene-HMPREF3052_05705;Dbxref=NCBI_GP:OFO28520.1;Name=OFO28520.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768942.1;locus_tag=HMPREF3052_05705;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=OFO28520.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 14721 15413 . + . ID=gene-HMPREF3052_05710;Name=HMPREF3052_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05710 GCA_001815685.1|KV821629.1 Protein Homology CDS 14721 15413 . + 0 ID=cds-OFO28454.1;Parent=gene-HMPREF3052_05710;Dbxref=NCBI_GP:OFO28454.1;Name=OFO28454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683752.1;locus_tag=HMPREF3052_05710;product=hypothetical protein;protein_id=OFO28454.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank pseudogene 15555 15928 . + . ID=gene-HMPREF3052_05715;Name=HMPREF3052_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_05715;pseudo=true GCA_001815685.1|KV821629.1 Protein Homology CDS 15555 15928 . + 0 ID=cds-HMPREF3052_05715;Parent=gene-HMPREF3052_05715;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679992.1;locus_tag=HMPREF3052_05715;product=homocysteine methyltransferase;pseudo=true;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 16069 16548 . + . ID=gene-HMPREF3052_05720;Name=HMPREF3052_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05720 GCA_001815685.1|KV821629.1 GeneMarkS+ CDS 16069 16548 . + 0 ID=cds-OFO28455.1;Parent=gene-HMPREF3052_05720;Dbxref=NCBI_GP:OFO28455.1;Name=OFO28455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05720;product=hypothetical protein;protein_id=OFO28455.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 16730 16996 . + . ID=gene-HMPREF3052_05725;Name=HMPREF3052_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05725 GCA_001815685.1|KV821629.1 GeneMarkS+ CDS 16730 16996 . + 0 ID=cds-OFO28456.1;Parent=gene-HMPREF3052_05725;Dbxref=NCBI_GP:OFO28456.1;Name=OFO28456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05725;product=hypothetical protein;protein_id=OFO28456.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 17063 17392 . - . ID=gene-HMPREF3052_05730;Name=HMPREF3052_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05730 GCA_001815685.1|KV821629.1 Protein Homology CDS 17063 17392 . - 0 ID=cds-OFO28457.1;Parent=gene-HMPREF3052_05730;Dbxref=NCBI_GP:OFO28457.1;Name=OFO28457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118768.1;locus_tag=HMPREF3052_05730;product=sulfurtransferase;protein_id=OFO28457.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 17445 18101 . - . ID=gene-HMPREF3052_05735;Name=HMPREF3052_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05735 GCA_001815685.1|KV821629.1 Protein Homology CDS 17445 18101 . - 0 ID=cds-OFO28458.1;Parent=gene-HMPREF3052_05735;Dbxref=NCBI_GP:OFO28458.1;Name=OFO28458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449510.1;locus_tag=HMPREF3052_05735;product=protein-L-isoaspartate O-methyltransferase;protein_id=OFO28458.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 18284 19057 . + . ID=gene-HMPREF3052_05740;Name=HMPREF3052_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05740 GCA_001815685.1|KV821629.1 Protein Homology CDS 18284 19057 . + 0 ID=cds-OFO28459.1;Parent=gene-HMPREF3052_05740;Dbxref=NCBI_GP:OFO28459.1;Name=OFO28459.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748082.1;locus_tag=HMPREF3052_05740;product=triose-phosphate isomerase;protein_id=OFO28459.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 19065 19424 . + . ID=gene-HMPREF3052_05745;Name=HMPREF3052_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05745 GCA_001815685.1|KV821629.1 Protein Homology CDS 19065 19424 . + 0 ID=cds-OFO28460.1;Parent=gene-HMPREF3052_05745;Dbxref=NCBI_GP:OFO28460.1;Name=OFO28460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676242.1;locus_tag=HMPREF3052_05745;product=preprotein translocase subunit SecG;protein_id=OFO28460.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 19440 19525 . + . ID=gene-HMPREF3052_05750;Name=HMPREF3052_05750;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_05750 GCA_001815685.1|KV821629.1 tRNAscan-SE tRNA 19440 19525 . + . ID=rna-HMPREF3052_05750;Parent=gene-HMPREF3052_05750;anticodon=(pos:19474..19476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_05750;product=tRNA-Leu GCA_001815685.1|KV821629.1 tRNAscan-SE exon 19440 19525 . + . ID=exon-HMPREF3052_05750-1;Parent=rna-HMPREF3052_05750;anticodon=(pos:19474..19476);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_05750;product=tRNA-Leu GCA_001815685.1|KV821629.1 Genbank gene 19616 20173 . + . ID=gene-HMPREF3052_05755;Name=HMPREF3052_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05755 GCA_001815685.1|KV821629.1 Protein Homology CDS 19616 20173 . + 0 ID=cds-OFO28461.1;Parent=gene-HMPREF3052_05755;Dbxref=NCBI_GP:OFO28461.1;Name=OFO28461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXP4.2;locus_tag=HMPREF3052_05755;product=aromatic acid decarboxylase;protein_id=OFO28461.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 20225 20659 . + . ID=gene-HMPREF3052_05760;Name=HMPREF3052_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05760 GCA_001815685.1|KV821629.1 Protein Homology CDS 20225 20659 . + 0 ID=cds-OFO28462.1;Parent=gene-HMPREF3052_05760;Dbxref=NCBI_GP:OFO28462.1;Name=OFO28462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683753.1;locus_tag=HMPREF3052_05760;product=hypothetical protein;protein_id=OFO28462.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 20713 21642 . - . ID=gene-HMPREF3052_05765;Name=HMPREF3052_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05765 GCA_001815685.1|KV821629.1 Protein Homology CDS 20713 21642 . - 0 ID=cds-OFO28463.1;Parent=gene-HMPREF3052_05765;Dbxref=NCBI_GP:OFO28463.1;Name=OFO28463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464452.1;locus_tag=HMPREF3052_05765;product=polyphosphate kinase 2;protein_id=OFO28463.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 21817 23601 . + . ID=gene-HMPREF3052_05770;Name=HMPREF3052_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05770 GCA_001815685.1|KV821629.1 Protein Homology CDS 21817 23601 . + 0 ID=cds-OFO28464.1;Parent=gene-HMPREF3052_05770;Dbxref=NCBI_GP:OFO28464.1;Name=OFO28464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464453.1;locus_tag=HMPREF3052_05770;product=aminobenzoate synthetase;protein_id=OFO28464.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 23703 24563 . + . ID=gene-HMPREF3052_05775;Name=HMPREF3052_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05775 GCA_001815685.1|KV821629.1 Protein Homology CDS 23703 24563 . + 0 ID=cds-OFO28465.1;Parent=gene-HMPREF3052_05775;Dbxref=NCBI_GP:OFO28465.1;Name=OFO28465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748096.1;locus_tag=HMPREF3052_05775;product=chromosome partitioning protein ParB;protein_id=OFO28465.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 25185 26051 . + . ID=gene-HMPREF3052_05780;Name=HMPREF3052_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05780 GCA_001815685.1|KV821629.1 Protein Homology CDS 25185 26051 . + 0 ID=cds-OFO28466.1;Parent=gene-HMPREF3052_05780;Dbxref=NCBI_GP:OFO28466.1;Name=OFO28466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464456.1;locus_tag=HMPREF3052_05780;product=F0F1 ATP synthase subunit A;protein_id=OFO28466.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 26116 26352 . + . ID=gene-HMPREF3052_05785;Name=HMPREF3052_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05785 GCA_001815685.1|KV821629.1 Protein Homology CDS 26116 26352 . + 0 ID=cds-OFO28467.1;Parent=gene-HMPREF3052_05785;Dbxref=NCBI_GP:OFO28467.1;Name=OFO28467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676106.1;locus_tag=HMPREF3052_05785;product=ATP synthase F0F1 subunit C;protein_id=OFO28467.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 26426 26896 . + . ID=gene-HMPREF3052_05790;Name=HMPREF3052_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05790 GCA_001815685.1|KV821629.1 Protein Homology CDS 26426 26896 . + 0 ID=cds-OFO28468.1;Parent=gene-HMPREF3052_05790;Dbxref=NCBI_GP:OFO28468.1;Name=OFO28468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688126.1;locus_tag=HMPREF3052_05790;product=F0F1 ATP synthase subunit B;protein_id=OFO28468.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 26901 27434 . + . ID=gene-HMPREF3052_05795;Name=HMPREF3052_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05795 GCA_001815685.1|KV821629.1 Protein Homology CDS 26901 27434 . + 0 ID=cds-OFO28469.1;Parent=gene-HMPREF3052_05795;Dbxref=NCBI_GP:OFO28469.1;Name=OFO28469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712708.1;locus_tag=HMPREF3052_05795;product=ATP synthase F0F1 subunit delta;protein_id=OFO28469.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 27445 28992 . + . ID=gene-HMPREF3052_05800;Name=HMPREF3052_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05800 GCA_001815685.1|KV821629.1 Protein Homology CDS 27445 28992 . + 0 ID=cds-OFO28470.1;Parent=gene-HMPREF3052_05800;Dbxref=NCBI_GP:OFO28470.1;Name=OFO28470.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449548.1;locus_tag=HMPREF3052_05800;product=ATP synthase subunit alpha;protein_id=OFO28470.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 29017 29892 . + . ID=gene-HMPREF3052_05805;Name=HMPREF3052_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05805 GCA_001815685.1|KV821629.1 Protein Homology CDS 29017 29892 . + 0 ID=cds-OFO28471.1;Parent=gene-HMPREF3052_05805;Dbxref=NCBI_GP:OFO28471.1;Name=OFO28471.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770227.1;locus_tag=HMPREF3052_05805;product=F0F1 ATP synthase subunit gamma;protein_id=OFO28471.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 29931 31328 . + . ID=gene-HMPREF3052_05810;Name=HMPREF3052_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05810 GCA_001815685.1|KV821629.1 Protein Homology CDS 29931 31328 . + 0 ID=cds-OFO28472.1;Parent=gene-HMPREF3052_05810;Dbxref=NCBI_GP:OFO28472.1;Name=OFO28472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688123.1;locus_tag=HMPREF3052_05810;product=ATP synthase subunit beta;protein_id=OFO28472.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 31339 31764 . + . ID=gene-HMPREF3052_05815;Name=HMPREF3052_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05815 GCA_001815685.1|KV821629.1 Protein Homology CDS 31339 31764 . + 0 ID=cds-OFO28473.1;Parent=gene-HMPREF3052_05815;Dbxref=NCBI_GP:OFO28473.1;Name=OFO28473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683708.1;locus_tag=HMPREF3052_05815;product=F0F1 ATP synthase subunit epsilon;protein_id=OFO28473.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 32132 33844 . - . ID=gene-HMPREF3052_05820;Name=HMPREF3052_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05820 GCA_001815685.1|KV821629.1 Protein Homology CDS 32132 33844 . - 0 ID=cds-OFO28474.1;Parent=gene-HMPREF3052_05820;Dbxref=NCBI_GP:OFO28474.1;Name=OFO28474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748114.1;locus_tag=HMPREF3052_05820;product=flotillin;protein_id=OFO28474.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 34034 34726 . - . ID=gene-HMPREF3052_05825;Name=HMPREF3052_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05825 GCA_001815685.1|KV821629.1 Protein Homology CDS 34034 34726 . - 0 ID=cds-OFO28475.1;Parent=gene-HMPREF3052_05825;Dbxref=NCBI_GP:OFO28475.1;Name=OFO28475.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743662.1;locus_tag=HMPREF3052_05825;product=transglycosylase;protein_id=OFO28475.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 34811 35374 . - . ID=gene-HMPREF3052_05830;Name=HMPREF3052_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05830 GCA_001815685.1|KV821629.1 Protein Homology CDS 34811 35374 . - 0 ID=cds-OFO28476.1;Parent=gene-HMPREF3052_05830;Dbxref=NCBI_GP:OFO28476.1;Name=OFO28476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687489.1;locus_tag=HMPREF3052_05830;product=hypothetical protein;protein_id=OFO28476.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 35453 36118 . - . ID=gene-HMPREF3052_05835;Name=HMPREF3052_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05835 GCA_001815685.1|KV821629.1 Protein Homology CDS 35453 36118 . - 0 ID=cds-OFO28477.1;Parent=gene-HMPREF3052_05835;Dbxref=NCBI_GP:OFO28477.1;Name=OFO28477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271528.1;locus_tag=HMPREF3052_05835;product=hypothetical protein;protein_id=OFO28477.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 36277 36759 . - . ID=gene-HMPREF3052_05840;Name=HMPREF3052_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05840 GCA_001815685.1|KV821629.1 Protein Homology CDS 36277 36759 . - 0 ID=cds-OFO28478.1;Parent=gene-HMPREF3052_05840;Dbxref=NCBI_GP:OFO28478.1;Name=OFO28478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174946.1;locus_tag=HMPREF3052_05840;product=peroxiredoxin;protein_id=OFO28478.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 36827 37054 . - . ID=gene-HMPREF3052_05845;Name=HMPREF3052_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05845 GCA_001815685.1|KV821629.1 Protein Homology CDS 36827 37054 . - 0 ID=cds-OFO28479.1;Parent=gene-HMPREF3052_05845;Dbxref=NCBI_GP:OFO28479.1;Name=OFO28479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271530.1;locus_tag=HMPREF3052_05845;product=hypothetical protein;protein_id=OFO28479.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 37183 37527 . + . ID=gene-HMPREF3052_05850;Name=HMPREF3052_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05850 GCA_001815685.1|KV821629.1 Protein Homology CDS 37183 37527 . + 0 ID=cds-OFO28480.1;Parent=gene-HMPREF3052_05850;Dbxref=NCBI_GP:OFO28480.1;Name=OFO28480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743670.1;locus_tag=HMPREF3052_05850;product=hypothetical protein;protein_id=OFO28480.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 37577 38014 . + . ID=gene-HMPREF3052_05855;Name=HMPREF3052_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05855 GCA_001815685.1|KV821629.1 Protein Homology CDS 37577 38014 . + 0 ID=cds-OFO28481.1;Parent=gene-HMPREF3052_05855;Dbxref=NCBI_GP:OFO28481.1;Name=OFO28481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687486.1;locus_tag=HMPREF3052_05855;product=hypothetical protein;protein_id=OFO28481.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 38102 38761 . - . ID=gene-HMPREF3052_05860;Name=HMPREF3052_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05860 GCA_001815685.1|KV821629.1 Protein Homology CDS 38102 38761 . - 0 ID=cds-OFO28482.1;Parent=gene-HMPREF3052_05860;Dbxref=NCBI_GP:OFO28482.1;Name=OFO28482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759847.1;locus_tag=HMPREF3052_05860;product=hypothetical protein;protein_id=OFO28482.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 38815 39315 . - . ID=gene-HMPREF3052_05865;Name=HMPREF3052_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05865 GCA_001815685.1|KV821629.1 Protein Homology CDS 38815 39315 . - 0 ID=cds-OFO28483.1;Parent=gene-HMPREF3052_05865;Dbxref=NCBI_GP:OFO28483.1;Name=OFO28483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743676.1;locus_tag=HMPREF3052_05865;product=hypothetical protein;protein_id=OFO28483.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank gene 39497 42292 . + . ID=gene-HMPREF3052_05870;Name=HMPREF3052_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05870 GCA_001815685.1|KV821629.1 Protein Homology CDS 39497 42292 . + 0 ID=cds-OFO28484.1;Parent=gene-HMPREF3052_05870;Dbxref=NCBI_GP:OFO28484.1;Name=OFO28484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518994.1;locus_tag=HMPREF3052_05870;product=DNA polymerase I;protein_id=OFO28484.1;transl_table=11 GCA_001815685.1|KV821629.1 Genbank pseudogene 42338 42688 . + . ID=gene-HMPREF3052_05875;Name=HMPREF3052_05875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_05875;pseudo=true GCA_001815685.1|KV821629.1 GeneMarkS+ CDS 42338 42688 . + 0 ID=cds-HMPREF3052_05875;Parent=gene-HMPREF3052_05875;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05875;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821630.1 1 28645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821630.1 Genbank region 1 28645 . + . ID=KV821630.1:1..28645;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821630.1 Genbank gene 77 3910 . - . ID=gene-HMPREF3052_05880;Name=HMPREF3052_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05880 GCA_001815685.1|KV821630.1 Protein Homology CDS 77 3910 . - 0 ID=cds-OFO28396.1;Parent=gene-HMPREF3052_05880;Dbxref=NCBI_GP:OFO28396.1;Name=OFO28396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951146.1;locus_tag=HMPREF3052_05880;product=FAD-linked oxidase;protein_id=OFO28396.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 4171 4267 . + . ID=gene-HMPREF3052_05885;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=HMPREF3052_05885 GCA_001815685.1|KV821630.1 cmsearch SRP_RNA 4171 4267 . + . ID=rna-HMPREF3052_05885;Parent=gene-HMPREF3052_05885;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_05885;product=signal recognition particle sRNA small type GCA_001815685.1|KV821630.1 cmsearch exon 4171 4267 . + . ID=exon-HMPREF3052_05885-1;Parent=rna-HMPREF3052_05885;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_05885;product=signal recognition particle sRNA small type GCA_001815685.1|KV821630.1 Genbank gene 4394 5611 . - . ID=gene-HMPREF3052_05890;Name=HMPREF3052_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05890 GCA_001815685.1|KV821630.1 Protein Homology CDS 4394 5611 . - 0 ID=cds-OFO28397.1;Parent=gene-HMPREF3052_05890;Dbxref=NCBI_GP:OFO28397.1;Name=OFO28397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746824.1;locus_tag=HMPREF3052_05890;product=uracil permease;protein_id=OFO28397.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 5779 6090 . - . ID=gene-HMPREF3052_05895;Name=HMPREF3052_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05895 GCA_001815685.1|KV821630.1 Protein Homology CDS 5779 6090 . - 0 ID=cds-OFO28398.1;Parent=gene-HMPREF3052_05895;Dbxref=NCBI_GP:OFO28398.1;Name=OFO28398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219238.1;locus_tag=HMPREF3052_05895;product=hypothetical protein;protein_id=OFO28398.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 6154 6765 . - . ID=gene-HMPREF3052_05900;Name=HMPREF3052_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05900 GCA_001815685.1|KV821630.1 GeneMarkS+ CDS 6154 6765 . - 0 ID=cds-OFO28399.1;Parent=gene-HMPREF3052_05900;Dbxref=NCBI_GP:OFO28399.1;Name=OFO28399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_05900;product=hypothetical protein;protein_id=OFO28399.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 6765 8027 . - . ID=gene-HMPREF3052_05905;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=HMPREF3052_05905 GCA_001815685.1|KV821630.1 Protein Homology CDS 6765 8027 . - 0 ID=cds-OFO28400.1;Parent=gene-HMPREF3052_05905;Dbxref=NCBI_GP:OFO28400.1;Name=OFO28400.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679236.1;locus_tag=HMPREF3052_05905;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=OFO28400.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 8103 9065 . - . ID=gene-HMPREF3052_05910;Name=HMPREF3052_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05910 GCA_001815685.1|KV821630.1 Protein Homology CDS 8103 9065 . - 0 ID=cds-OFO28401.1;Parent=gene-HMPREF3052_05910;Dbxref=NCBI_GP:OFO28401.1;Name=OFO28401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683281.1;locus_tag=HMPREF3052_05910;product=stomatin 2;protein_id=OFO28401.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 9075 9500 . - . ID=gene-HMPREF3052_05915;Name=HMPREF3052_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05915 GCA_001815685.1|KV821630.1 Protein Homology CDS 9075 9500 . - 0 ID=cds-OFO28402.1;Parent=gene-HMPREF3052_05915;Dbxref=NCBI_GP:OFO28402.1;Name=OFO28402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683491.1;locus_tag=HMPREF3052_05915;product=nodulation efficiency NfeD family protein;protein_id=OFO28402.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 9626 10285 . + . ID=gene-HMPREF3052_05920;Name=HMPREF3052_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05920 GCA_001815685.1|KV821630.1 Protein Homology CDS 9626 10285 . + 0 ID=cds-OFO28403.1;Parent=gene-HMPREF3052_05920;Dbxref=NCBI_GP:OFO28403.1;Name=OFO28403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683303.1;locus_tag=HMPREF3052_05920;product=uracil-DNA glycosylase;protein_id=OFO28403.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 10339 11412 . - . ID=gene-HMPREF3052_05925;Name=HMPREF3052_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05925 GCA_001815685.1|KV821630.1 Protein Homology CDS 10339 11412 . - 0 ID=cds-OFO28404.1;Parent=gene-HMPREF3052_05925;Dbxref=NCBI_GP:OFO28404.1;Name=OFO28404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173155.1;locus_tag=HMPREF3052_05925;product=sulfate ABC transporter ATP-binding protein;protein_id=OFO28404.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 11409 12269 . - . ID=gene-HMPREF3052_05930;Name=HMPREF3052_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05930 GCA_001815685.1|KV821630.1 Protein Homology CDS 11409 12269 . - 0 ID=cds-OFO28405.1;Parent=gene-HMPREF3052_05930;Dbxref=NCBI_GP:OFO28405.1;Name=OFO28405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674970.1;locus_tag=HMPREF3052_05930;product=sulfate ABC transporter permease subunit CysW;protein_id=OFO28405.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 12354 13190 . - . ID=gene-HMPREF3052_05935;Name=HMPREF3052_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05935 GCA_001815685.1|KV821630.1 Protein Homology CDS 12354 13190 . - 0 ID=cds-OFO28406.1;Parent=gene-HMPREF3052_05935;Dbxref=NCBI_GP:OFO28406.1;Name=OFO28406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284276.1;locus_tag=HMPREF3052_05935;product=sulfate/thiosulfate transporter subunit;protein_id=OFO28406.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 13351 13800 . - . ID=gene-HMPREF3052_05940;Name=HMPREF3052_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05940 GCA_001815685.1|KV821630.1 Protein Homology CDS 13351 13800 . - 0 ID=cds-OFO28407.1;Parent=gene-HMPREF3052_05940;Dbxref=NCBI_GP:OFO28407.1;Name=OFO28407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680214.1;locus_tag=HMPREF3052_05940;product=lipoic acid synthetase;protein_id=OFO28407.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 13814 14008 . - . ID=gene-HMPREF3052_05945;Name=HMPREF3052_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05945 GCA_001815685.1|KV821630.1 Protein Homology CDS 13814 14008 . - 0 ID=cds-OFO28408.1;Parent=gene-HMPREF3052_05945;Dbxref=NCBI_GP:OFO28408.1;Name=OFO28408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742028.1;locus_tag=HMPREF3052_05945;product=hypothetical protein;protein_id=OFO28408.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 14194 15822 . + . ID=gene-HMPREF3052_05950;Name=HMPREF3052_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05950 GCA_001815685.1|KV821630.1 Protein Homology CDS 14194 15822 . + 0 ID=cds-OFO28409.1;Parent=gene-HMPREF3052_05950;Dbxref=NCBI_GP:OFO28409.1;Name=OFO28409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683571.1;locus_tag=HMPREF3052_05950;product=ABC-F family ATPase;protein_id=OFO28409.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 16047 17264 . - . ID=gene-HMPREF3052_05955;Name=HMPREF3052_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05955 GCA_001815685.1|KV821630.1 Protein Homology CDS 16047 17264 . - 0 ID=cds-OFO28410.1;Parent=gene-HMPREF3052_05955;Dbxref=NCBI_GP:OFO28410.1;Name=OFO28410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520574.1;locus_tag=HMPREF3052_05955;product=peptidase;protein_id=OFO28410.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 17470 18993 . + . ID=gene-HMPREF3052_05960;Name=HMPREF3052_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05960 GCA_001815685.1|KV821630.1 Protein Homology CDS 17470 18993 . + 0 ID=cds-OFO28411.1;Parent=gene-HMPREF3052_05960;Dbxref=NCBI_GP:OFO28411.1;Name=OFO28411.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252306.1;locus_tag=HMPREF3052_05960;product=PLP-dependent threonine dehydratase;protein_id=OFO28411.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 19053 19769 . - . ID=gene-HMPREF3052_05965;Name=HMPREF3052_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05965 GCA_001815685.1|KV821630.1 Protein Homology CDS 19053 19769 . - 0 ID=cds-OFO28412.1;Parent=gene-HMPREF3052_05965;Dbxref=NCBI_GP:OFO28412.1;Name=OFO28412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683649.1;locus_tag=HMPREF3052_05965;product=tRNA (guanine(46)-N(7))-methyltransferase;protein_id=OFO28412.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 19907 20563 . - . ID=gene-HMPREF3052_05970;Name=HMPREF3052_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05970 GCA_001815685.1|KV821630.1 Protein Homology CDS 19907 20563 . - 0 ID=cds-OFO28413.1;Parent=gene-HMPREF3052_05970;Dbxref=NCBI_GP:OFO28413.1;Name=OFO28413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680203.1;locus_tag=HMPREF3052_05970;product=DNA-binding response regulator;protein_id=OFO28413.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 20560 22320 . - . ID=gene-HMPREF3052_05975;Name=HMPREF3052_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05975 GCA_001815685.1|KV821630.1 Protein Homology CDS 20560 22320 . - 0 ID=cds-OFO28414.1;Parent=gene-HMPREF3052_05975;Dbxref=NCBI_GP:OFO28414.1;Name=OFO28414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746783.1;locus_tag=HMPREF3052_05975;product=ATPase;protein_id=OFO28414.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 22580 23161 . + . ID=gene-HMPREF3052_05980;Name=HMPREF3052_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05980 GCA_001815685.1|KV821630.1 Protein Homology CDS 22580 23161 . + 0 ID=cds-OFO28415.1;Parent=gene-HMPREF3052_05980;Dbxref=NCBI_GP:OFO28415.1;Name=OFO28415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520569.1;locus_tag=HMPREF3052_05980;product=molybdenum cofactor guanylyltransferase;protein_id=OFO28415.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 23290 24129 . - . ID=gene-HMPREF3052_05985;Name=HMPREF3052_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05985 GCA_001815685.1|KV821630.1 Protein Homology CDS 23290 24129 . - 0 ID=cds-OFO28416.1;Parent=gene-HMPREF3052_05985;Dbxref=NCBI_GP:OFO28416.1;Name=OFO28416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683458.1;locus_tag=HMPREF3052_05985;product=epimerase;protein_id=OFO28416.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 24168 24650 . - . ID=gene-HMPREF3052_05990;Name=HMPREF3052_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05990 GCA_001815685.1|KV821630.1 Protein Homology CDS 24168 24650 . - 0 ID=cds-OFO28417.1;Parent=gene-HMPREF3052_05990;Dbxref=NCBI_GP:OFO28417.1;Name=OFO28417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781719.1;locus_tag=HMPREF3052_05990;product=hypothetical protein;protein_id=OFO28417.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 24647 25036 . - . ID=gene-HMPREF3052_05995;Name=HMPREF3052_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_05995 GCA_001815685.1|KV821630.1 Protein Homology CDS 24647 25036 . - 0 ID=cds-OFO28418.1;Parent=gene-HMPREF3052_05995;Dbxref=NCBI_GP:OFO28418.1;Name=OFO28418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765989.1;locus_tag=HMPREF3052_05995;product=epimerase;protein_id=OFO28418.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 25299 25817 . - . ID=gene-HMPREF3052_06000;Name=HMPREF3052_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06000 GCA_001815685.1|KV821630.1 Protein Homology CDS 25299 25817 . - 0 ID=cds-OFO28419.1;Parent=gene-HMPREF3052_06000;Dbxref=NCBI_GP:OFO28419.1;Name=OFO28419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778705.1;locus_tag=HMPREF3052_06000;product=MarR family transcriptional regulator;protein_id=OFO28419.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 26057 26842 . + . ID=gene-HMPREF3052_06005;Name=HMPREF3052_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06005 GCA_001815685.1|KV821630.1 Protein Homology CDS 26057 26842 . + 0 ID=cds-OFO28420.1;Parent=gene-HMPREF3052_06005;Dbxref=NCBI_GP:OFO28420.1;Name=OFO28420.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746768.1;locus_tag=HMPREF3052_06005;product=dioxygenase;protein_id=OFO28420.1;transl_table=11 GCA_001815685.1|KV821630.1 Genbank gene 27187 27444 . - . ID=gene-HMPREF3052_06010;Name=HMPREF3052_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06010;partial=true;start_range=.,27187 GCA_001815685.1|KV821630.1 Protein Homology CDS 27187 27444 . - 0 ID=cds-OFO28383.1;Parent=gene-HMPREF3052_06010;Dbxref=NCBI_GP:OFO28383.1;Name=OFO28383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683287.1;locus_tag=HMPREF3052_06010;partial=true;product=conjugal transfer protein TrbM;protein_id=OFO28383.1;start_range=.,27187;transl_table=11 GCA_001815685.1|KV821630.1 Genbank pseudogene 28097 28645 . - . ID=gene-HMPREF3052_06015;Name=HMPREF3052_06015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06015;pseudo=true GCA_001815685.1|KV821630.1 Protein Homology CDS 28097 28645 . - 0 ID=cds-HMPREF3052_06015;Parent=gene-HMPREF3052_06015;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683534.1;locus_tag=HMPREF3052_06015;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821631.1 1 32760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821631.1 Genbank region 1 32760 . + . ID=KV821631.1:1..32760;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821631.1 Genbank pseudogene 1 340 . + . ID=gene-HMPREF3052_06020;Name=HMPREF3052_06020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06020;pseudo=true GCA_001815685.1|KV821631.1 Protein Homology CDS 1 340 . + 1 ID=cds-HMPREF3052_06020;Parent=gene-HMPREF3052_06020;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767349.1;locus_tag=HMPREF3052_06020;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 384 1721 . + . ID=gene-HMPREF3052_06025;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF3052_06025 GCA_001815685.1|KV821631.1 Protein Homology CDS 384 1721 . + 0 ID=cds-OFO28284.1;Parent=gene-HMPREF3052_06025;Dbxref=NCBI_GP:OFO28284.1;Name=OFO28284.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312754.1;locus_tag=HMPREF3052_06025;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=OFO28284.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 1735 2295 . + . ID=gene-HMPREF3052_06030;Name=HMPREF3052_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06030 GCA_001815685.1|KV821631.1 Protein Homology CDS 1735 2295 . + 0 ID=cds-OFO28285.1;Parent=gene-HMPREF3052_06030;Dbxref=NCBI_GP:OFO28285.1;Name=OFO28285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757257.1;locus_tag=HMPREF3052_06030;product=hypothetical protein;protein_id=OFO28285.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 2499 3995 . + . ID=gene-HMPREF3052_06035;Name=HMPREF3052_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06035 GCA_001815685.1|KV821631.1 Protein Homology CDS 2499 3995 . + 0 ID=cds-OFO28286.1;Parent=gene-HMPREF3052_06035;Dbxref=NCBI_GP:OFO28286.1;Name=OFO28286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682499.1;locus_tag=HMPREF3052_06035;product=6-aminohexanoate hydrolase;protein_id=OFO28286.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 4267 5529 . + . ID=gene-HMPREF3052_06040;Name=HMPREF3052_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06040 GCA_001815685.1|KV821631.1 Protein Homology CDS 4267 5529 . + 0 ID=cds-OFO28287.1;Parent=gene-HMPREF3052_06040;Dbxref=NCBI_GP:OFO28287.1;Name=OFO28287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748295.1;locus_tag=HMPREF3052_06040;product=cell division protein FtsW;protein_id=OFO28287.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 5534 6601 . + . ID=gene-HMPREF3052_06045;Name=HMPREF3052_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06045 GCA_001815685.1|KV821631.1 Protein Homology CDS 5534 6601 . + 0 ID=cds-OFO28288.1;Parent=gene-HMPREF3052_06045;Dbxref=NCBI_GP:OFO28288.1;Name=OFO28288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742831.1;locus_tag=HMPREF3052_06045;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=OFO28288.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 6736 7563 . + . ID=gene-HMPREF3052_06050;Name=HMPREF3052_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06050 GCA_001815685.1|KV821631.1 Protein Homology CDS 6736 7563 . + 0 ID=cds-OFO28289.1;Parent=gene-HMPREF3052_06050;Dbxref=NCBI_GP:OFO28289.1;Name=OFO28289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742832.1;locus_tag=HMPREF3052_06050;product=methyltransferase;protein_id=OFO28289.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 7818 9227 . + . ID=gene-HMPREF3052_06055;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF3052_06055 GCA_001815685.1|KV821631.1 Protein Homology CDS 7818 9227 . + 0 ID=cds-OFO28290.1;Parent=gene-HMPREF3052_06055;Dbxref=NCBI_GP:OFO28290.1;Name=OFO28290.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676714.1;locus_tag=HMPREF3052_06055;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=OFO28290.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 9315 10229 . + . ID=gene-HMPREF3052_06060;Name=HMPREF3052_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06060 GCA_001815685.1|KV821631.1 Protein Homology CDS 9315 10229 . + 0 ID=cds-OFO28291.1;Parent=gene-HMPREF3052_06060;Dbxref=NCBI_GP:OFO28291.1;Name=OFO28291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764621.1;locus_tag=HMPREF3052_06060;product=D-alanine--D-alanine ligase;protein_id=OFO28291.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 10219 10938 . + . ID=gene-HMPREF3052_06065;Name=HMPREF3052_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06065 GCA_001815685.1|KV821631.1 Protein Homology CDS 10219 10938 . + 0 ID=cds-OFO28292.1;Parent=gene-HMPREF3052_06065;Dbxref=NCBI_GP:OFO28292.1;Name=OFO28292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748302.1;locus_tag=HMPREF3052_06065;product=cell division protein FtsQ;protein_id=OFO28292.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 11013 12266 . + . ID=gene-HMPREF3052_06070;Name=HMPREF3052_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06070 GCA_001815685.1|KV821631.1 Protein Homology CDS 11013 12266 . + 0 ID=cds-OFO28293.1;Parent=gene-HMPREF3052_06070;Dbxref=NCBI_GP:OFO28293.1;Name=OFO28293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682483.1;locus_tag=HMPREF3052_06070;product=cell division protein FtsA;protein_id=OFO28293.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 12519 13718 . + . ID=gene-HMPREF3052_06075;Name=HMPREF3052_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06075 GCA_001815685.1|KV821631.1 Protein Homology CDS 12519 13718 . + 0 ID=cds-OFO28294.1;Parent=gene-HMPREF3052_06075;Dbxref=NCBI_GP:OFO28294.1;Name=OFO28294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272158.1;locus_tag=HMPREF3052_06075;product=cell division protein FtsZ;protein_id=OFO28294.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 13840 14808 . - . ID=gene-HMPREF3052_06080;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF3052_06080 GCA_001815685.1|KV821631.1 Protein Homology CDS 13840 14808 . - 0 ID=cds-OFO28295.1;Parent=gene-HMPREF3052_06080;Dbxref=NCBI_GP:OFO28295.1;Name=OFO28295.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688229.1;locus_tag=HMPREF3052_06080;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=OFO28295.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 14822 15328 . - . ID=gene-HMPREF3052_06085;Name=HMPREF3052_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06085 GCA_001815685.1|KV821631.1 Protein Homology CDS 14822 15328 . - 0 ID=cds-OFO28296.1;Parent=gene-HMPREF3052_06085;Dbxref=NCBI_GP:OFO28296.1;Name=OFO28296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748308.1;locus_tag=HMPREF3052_06085;product=signal peptidase II;protein_id=OFO28296.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 15477 16376 . - . ID=gene-HMPREF3052_06090;Name=HMPREF3052_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06090 GCA_001815685.1|KV821631.1 Protein Homology CDS 15477 16376 . - 0 ID=cds-OFO28297.1;Parent=gene-HMPREF3052_06090;Dbxref=NCBI_GP:OFO28297.1;Name=OFO28297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115827.1;locus_tag=HMPREF3052_06090;product=glycine--tRNA ligase subunit alpha;protein_id=OFO28297.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 16458 16640 . - . ID=gene-HMPREF3052_06095;Name=HMPREF3052_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06095 GCA_001815685.1|KV821631.1 Protein Homology CDS 16458 16640 . - 0 ID=cds-OFO28298.1;Parent=gene-HMPREF3052_06095;Dbxref=NCBI_GP:OFO28298.1;Name=OFO28298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682475.1;locus_tag=HMPREF3052_06095;product=DNA gyrase inhibitor;protein_id=OFO28298.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 16637 17257 . - . ID=gene-HMPREF3052_06100;Name=HMPREF3052_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06100 GCA_001815685.1|KV821631.1 Protein Homology CDS 16637 17257 . - 0 ID=cds-OFO28299.1;Parent=gene-HMPREF3052_06100;Dbxref=NCBI_GP:OFO28299.1;Name=OFO28299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748310.1;locus_tag=HMPREF3052_06100;product=dephospho-CoA kinase;protein_id=OFO28299.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 17257 18144 . - . ID=gene-HMPREF3052_06105;Name=HMPREF3052_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06105 GCA_001815685.1|KV821631.1 Protein Homology CDS 17257 18144 . - 0 ID=cds-OFO28300.1;Parent=gene-HMPREF3052_06105;Dbxref=NCBI_GP:OFO28300.1;Name=OFO28300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518866.1;locus_tag=HMPREF3052_06105;product=methyltransferase;protein_id=OFO28300.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 18146 19387 . - . ID=gene-HMPREF3052_06110;Name=HMPREF3052_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06110 GCA_001815685.1|KV821631.1 Protein Homology CDS 18146 19387 . - 0 ID=cds-OFO28301.1;Parent=gene-HMPREF3052_06110;Dbxref=NCBI_GP:OFO28301.1;Name=OFO28301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688224.1;locus_tag=HMPREF3052_06110;product=type II secretion system protein F;protein_id=OFO28301.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 19467 21146 . - . ID=gene-HMPREF3052_06115;Name=HMPREF3052_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06115 GCA_001815685.1|KV821631.1 Protein Homology CDS 19467 21146 . - 0 ID=cds-OFO28302.1;Parent=gene-HMPREF3052_06115;Dbxref=NCBI_GP:OFO28302.1;Name=OFO28302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212332.1;locus_tag=HMPREF3052_06115;product=type IV-A pilus assembly ATPase PilB;protein_id=OFO28302.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 21550 24765 . - . ID=gene-HMPREF3052_06120;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HMPREF3052_06120 GCA_001815685.1|KV821631.1 Protein Homology CDS 21550 24765 . - 0 ID=cds-OFO28303.1;Parent=gene-HMPREF3052_06120;Dbxref=NCBI_GP:OFO28303.1;Name=OFO28303.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749610.1;locus_tag=HMPREF3052_06120;product=carbamoyl phosphate synthase large subunit;protein_id=OFO28303.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 24744 25550 . - . ID=gene-HMPREF3052_06125;Name=HMPREF3052_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06125 GCA_001815685.1|KV821631.1 GeneMarkS+ CDS 24744 25550 . - 0 ID=cds-OFO28304.1;Parent=gene-HMPREF3052_06125;Dbxref=NCBI_GP:OFO28304.1;Name=OFO28304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06125;product=hypothetical protein;protein_id=OFO28304.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 26817 27206 . - . ID=gene-HMPREF3052_06130;Name=HMPREF3052_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06130 GCA_001815685.1|KV821631.1 Protein Homology CDS 26817 27206 . - 0 ID=cds-OFO28281.1;Parent=gene-HMPREF3052_06130;Dbxref=NCBI_GP:OFO28281.1;Name=OFO28281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686761.1;locus_tag=HMPREF3052_06130;product=endonuclease;protein_id=OFO28281.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 27310 27567 . - . ID=gene-HMPREF3052_06135;Name=HMPREF3052_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06135 GCA_001815685.1|KV821631.1 Protein Homology CDS 27310 27567 . - 0 ID=cds-OFO28278.1;Parent=gene-HMPREF3052_06135;Dbxref=NCBI_GP:OFO28278.1;Name=OFO28278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687622.1;locus_tag=HMPREF3052_06135;product=hypothetical protein;protein_id=OFO28278.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 27719 28849 . - . ID=gene-HMPREF3052_06140;Name=HMPREF3052_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06140 GCA_001815685.1|KV821631.1 Protein Homology CDS 27719 28849 . - 0 ID=cds-OFO28279.1;Parent=gene-HMPREF3052_06140;Dbxref=NCBI_GP:OFO28279.1;Name=OFO28279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712586.1;locus_tag=HMPREF3052_06140;product=carbamoyl-phosphate synthase small subunit;protein_id=OFO28279.1;transl_table=11 GCA_001815685.1|KV821631.1 Genbank gene 29244 32462 . + . ID=gene-HMPREF3052_06145;Name=HMPREF3052_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06145 GCA_001815685.1|KV821631.1 Protein Homology CDS 29244 32462 . + 0 ID=cds-OFO28280.1;Parent=gene-HMPREF3052_06145;Dbxref=NCBI_GP:OFO28280.1;Name=OFO28280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270445.1;locus_tag=HMPREF3052_06145;product=pilus assembly protein;protein_id=OFO28280.1;transl_table=11 ##sequence-region KV821632.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821632.1 Genbank region 1 284 . + . ID=KV821632.1:1..284;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821633.1 1 76623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821633.1 Genbank region 1 76623 . + . ID=KV821633.1:1..76623;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821633.1 Genbank gene 61 1233 . - . ID=gene-HMPREF3052_06150;Name=HMPREF3052_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06150 GCA_001815685.1|KV821633.1 Protein Homology CDS 61 1233 . - 0 ID=cds-OFO28228.1;Parent=gene-HMPREF3052_06150;Dbxref=NCBI_GP:OFO28228.1;Name=OFO28228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520097.1;locus_tag=HMPREF3052_06150;product=2-nitropropane dioxygenase;protein_id=OFO28228.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 1574 2254 . - . ID=gene-HMPREF3052_06155;Name=HMPREF3052_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06155 GCA_001815685.1|KV821633.1 Protein Homology CDS 1574 2254 . - 0 ID=cds-OFO28229.1;Parent=gene-HMPREF3052_06155;Dbxref=NCBI_GP:OFO28229.1;Name=OFO28229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283908.1;locus_tag=HMPREF3052_06155;product=hypothetical protein;protein_id=OFO28229.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 2473 3348 . - . ID=gene-HMPREF3052_06160;Name=HMPREF3052_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06160 GCA_001815685.1|KV821633.1 Protein Homology CDS 2473 3348 . - 0 ID=cds-OFO28230.1;Parent=gene-HMPREF3052_06160;Dbxref=NCBI_GP:OFO28230.1;Name=OFO28230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749744.1;locus_tag=HMPREF3052_06160;product=hypothetical protein;protein_id=OFO28230.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 3510 3899 . + . ID=gene-HMPREF3052_06165;Name=HMPREF3052_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06165 GCA_001815685.1|KV821633.1 Protein Homology CDS 3510 3899 . + 0 ID=cds-OFO28231.1;Parent=gene-HMPREF3052_06165;Dbxref=NCBI_GP:OFO28231.1;Name=OFO28231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747304.1;locus_tag=HMPREF3052_06165;product=hypothetical protein;protein_id=OFO28231.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 4022 4948 . + . ID=gene-HMPREF3052_06170;Name=HMPREF3052_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06170 GCA_001815685.1|KV821633.1 Protein Homology CDS 4022 4948 . + 0 ID=cds-OFO28232.1;Parent=gene-HMPREF3052_06170;Dbxref=NCBI_GP:OFO28232.1;Name=OFO28232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464285.1;locus_tag=HMPREF3052_06170;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=OFO28232.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 5087 7876 . + . ID=gene-HMPREF3052_06175;Name=HMPREF3052_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06175 GCA_001815685.1|KV821633.1 Protein Homology CDS 5087 7876 . + 0 ID=cds-OFO28233.1;Parent=gene-HMPREF3052_06175;Dbxref=NCBI_GP:OFO28233.1;Name=OFO28233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747300.1;locus_tag=HMPREF3052_06175;product=isoleucine--tRNA ligase;protein_id=OFO28233.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 8252 8659 . - . ID=gene-HMPREF3052_06180;Name=HMPREF3052_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06180 GCA_001815685.1|KV821633.1 Protein Homology CDS 8252 8659 . - 0 ID=cds-OFO28234.1;Parent=gene-HMPREF3052_06180;Dbxref=NCBI_GP:OFO28234.1;Name=OFO28234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747296.1;locus_tag=HMPREF3052_06180;product=hypothetical protein;protein_id=OFO28234.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 8900 9025 . - . ID=gene-HMPREF3052_06185;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF3052_06185 GCA_001815685.1|KV821633.1 Protein Homology CDS 8900 9025 . - 0 ID=cds-OFO28235.1;Parent=gene-HMPREF3052_06185;Dbxref=NCBI_GP:OFO28235.1;Name=OFO28235.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:SwissProt:A9M4E0.1;locus_tag=HMPREF3052_06185;product=50S ribosomal protein L36;protein_id=OFO28235.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 9025 9300 . - . ID=gene-HMPREF3052_06190;Name=HMPREF3052_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06190 GCA_001815685.1|KV821633.1 Protein Homology CDS 9025 9300 . - 0 ID=cds-OFO28236.1;Parent=gene-HMPREF3052_06190;Dbxref=NCBI_GP:OFO28236.1;Name=OFO28236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271952.1;locus_tag=HMPREF3052_06190;product=50S ribosomal protein L31;protein_id=OFO28236.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 9474 10970 . + . ID=gene-HMPREF3052_06195;Name=HMPREF3052_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06195 GCA_001815685.1|KV821633.1 Protein Homology CDS 9474 10970 . + 0 ID=cds-OFO28237.1;Parent=gene-HMPREF3052_06195;Dbxref=NCBI_GP:OFO28237.1;Name=OFO28237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464261.1;locus_tag=HMPREF3052_06195;product=potassium transporter Trk;protein_id=OFO28237.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 11026 11889 . - . ID=gene-HMPREF3052_06200;Name=HMPREF3052_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06200 GCA_001815685.1|KV821633.1 Protein Homology CDS 11026 11889 . - 0 ID=cds-OFO28238.1;Parent=gene-HMPREF3052_06200;Dbxref=NCBI_GP:OFO28238.1;Name=OFO28238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464259.1;locus_tag=HMPREF3052_06200;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=OFO28238.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 12001 14472 . - . ID=gene-HMPREF3052_06205;Name=HMPREF3052_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06205 GCA_001815685.1|KV821633.1 Protein Homology CDS 12001 14472 . - 0 ID=cds-OFO28239.1;Parent=gene-HMPREF3052_06205;Dbxref=NCBI_GP:OFO28239.1;Name=OFO28239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173900.1;locus_tag=HMPREF3052_06205;product=DNA ligase (NAD(+)) LigA;protein_id=OFO28239.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 14610 15878 . - . ID=gene-HMPREF3052_06210;Name=HMPREF3052_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06210 GCA_001815685.1|KV821633.1 Protein Homology CDS 14610 15878 . - 0 ID=cds-OFO28240.1;Parent=gene-HMPREF3052_06210;Dbxref=NCBI_GP:OFO28240.1;Name=OFO28240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520113.1;locus_tag=HMPREF3052_06210;product=cell division protein ZipA;protein_id=OFO28240.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 16056 16622 . - . ID=gene-HMPREF3052_06215;Name=HMPREF3052_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06215 GCA_001815685.1|KV821633.1 Protein Homology CDS 16056 16622 . - 0 ID=cds-OFO28241.1;Parent=gene-HMPREF3052_06215;Dbxref=NCBI_GP:OFO28241.1;Name=OFO28241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747287.1;locus_tag=HMPREF3052_06215;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=OFO28241.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 16738 17733 . + . ID=gene-HMPREF3052_06220;Name=HMPREF3052_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06220 GCA_001815685.1|KV821633.1 Protein Homology CDS 16738 17733 . + 0 ID=cds-OFO28242.1;Parent=gene-HMPREF3052_06220;Dbxref=NCBI_GP:OFO28242.1;Name=OFO28242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520116.1;locus_tag=HMPREF3052_06220;product=aminodeoxychorismate lyase;protein_id=OFO28242.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 17801 18427 . + . ID=gene-HMPREF3052_06225;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=HMPREF3052_06225 GCA_001815685.1|KV821633.1 Protein Homology CDS 17801 18427 . + 0 ID=cds-OFO28243.1;Parent=gene-HMPREF3052_06225;Dbxref=NCBI_GP:OFO28243.1;Name=OFO28243.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;gene=tmk;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747283.1;locus_tag=HMPREF3052_06225;product=thymidylate kinase;protein_id=OFO28243.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank pseudogene 18691 19962 . + . ID=gene-HMPREF3052_06230;Name=HMPREF3052_06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06230;pseudo=true GCA_001815685.1|KV821633.1 Protein Homology CDS 18691 19962 . + 0 ID=cds-HMPREF3052_06230;Parent=gene-HMPREF3052_06230;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427490.1;locus_tag=HMPREF3052_06230;product=malic enzyme;pseudo=true;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 20272 21615 . - . ID=gene-HMPREF3052_06235;Name=HMPREF3052_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06235 GCA_001815685.1|KV821633.1 Protein Homology CDS 20272 21615 . - 0 ID=cds-OFO28244.1;Parent=gene-HMPREF3052_06235;Dbxref=NCBI_GP:OFO28244.1;Name=OFO28244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219139.1;locus_tag=HMPREF3052_06235;product=aldehyde dehydrogenase;protein_id=OFO28244.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 21823 22482 . - . ID=gene-HMPREF3052_06240;Name=HMPREF3052_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06240 GCA_001815685.1|KV821633.1 Protein Homology CDS 21823 22482 . - 0 ID=cds-OFO28176.1;Parent=gene-HMPREF3052_06240;Dbxref=NCBI_GP:OFO28176.1;Name=OFO28176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520122.1;locus_tag=HMPREF3052_06240;product=hypothetical protein;protein_id=OFO28176.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 22484 23632 . - . ID=gene-HMPREF3052_06245;Name=HMPREF3052_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06245 GCA_001815685.1|KV821633.1 Protein Homology CDS 22484 23632 . - 0 ID=cds-OFO28177.1;Parent=gene-HMPREF3052_06245;Dbxref=NCBI_GP:OFO28177.1;Name=OFO28177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778895.1;locus_tag=HMPREF3052_06245;product=rod shape-determining protein RodA;protein_id=OFO28177.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 23625 25673 . - . ID=gene-HMPREF3052_06250;Name=HMPREF3052_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06250 GCA_001815685.1|KV821633.1 Protein Homology CDS 23625 25673 . - 0 ID=cds-OFO28178.1;Parent=gene-HMPREF3052_06250;Dbxref=NCBI_GP:OFO28178.1;Name=OFO28178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520124.1;locus_tag=HMPREF3052_06250;product=penicillin-binding protein 2;protein_id=OFO28178.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 25678 26178 . - . ID=gene-HMPREF3052_06255;Name=HMPREF3052_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06255 GCA_001815685.1|KV821633.1 Protein Homology CDS 25678 26178 . - 0 ID=cds-OFO28179.1;Parent=gene-HMPREF3052_06255;Dbxref=NCBI_GP:OFO28179.1;Name=OFO28179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756286.1;locus_tag=HMPREF3052_06255;product=rod shape-determining protein MreD;protein_id=OFO28179.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 26183 27025 . - . ID=gene-HMPREF3052_06260;Name=HMPREF3052_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06260 GCA_001815685.1|KV821633.1 Protein Homology CDS 26183 27025 . - 0 ID=cds-OFO28208.1;Parent=gene-HMPREF3052_06260;Dbxref=NCBI_GP:OFO28208.1;Name=OFO28208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747270.1;locus_tag=HMPREF3052_06260;product=rod shape-determining protein MreC;protein_id=OFO28208.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 27037 28077 . - . ID=gene-HMPREF3052_06265;Name=HMPREF3052_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06265 GCA_001815685.1|KV821633.1 Protein Homology CDS 27037 28077 . - 0 ID=cds-OFO28180.1;Parent=gene-HMPREF3052_06265;Dbxref=NCBI_GP:OFO28180.1;Name=OFO28180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464229.1;locus_tag=HMPREF3052_06265;product=rod shape-determining protein;protein_id=OFO28180.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 28302 28592 . + . ID=gene-HMPREF3052_06270;Name=HMPREF3052_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06270 GCA_001815685.1|KV821633.1 Protein Homology CDS 28302 28592 . + 0 ID=cds-OFO28181.1;Parent=gene-HMPREF3052_06270;Dbxref=NCBI_GP:OFO28181.1;Name=OFO28181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117012.1;locus_tag=HMPREF3052_06270;product=asparaginyl/glutamyl-tRNA amidotransferase subunit C;protein_id=OFO28181.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 28743 30191 . + . ID=gene-HMPREF3052_06275;Name=HMPREF3052_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06275 GCA_001815685.1|KV821633.1 Protein Homology CDS 28743 30191 . + 0 ID=cds-OFO28182.1;Parent=gene-HMPREF3052_06275;Dbxref=NCBI_GP:OFO28182.1;Name=OFO28182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747267.1;locus_tag=HMPREF3052_06275;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=OFO28182.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 30207 31082 . + . ID=gene-HMPREF3052_06280;Name=HMPREF3052_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06280 GCA_001815685.1|KV821633.1 Protein Homology CDS 30207 31082 . + 0 ID=cds-OFO28183.1;Parent=gene-HMPREF3052_06280;Dbxref=NCBI_GP:OFO28183.1;Name=OFO28183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464223.1;locus_tag=HMPREF3052_06280;product=hypothetical protein;protein_id=OFO28183.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 31111 31731 . + . ID=gene-HMPREF3052_06285;Name=HMPREF3052_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06285 GCA_001815685.1|KV821633.1 Protein Homology CDS 31111 31731 . + 0 ID=cds-OFO28184.1;Parent=gene-HMPREF3052_06285;Dbxref=NCBI_GP:OFO28184.1;Name=OFO28184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824373.1;locus_tag=HMPREF3052_06285;product=hypothetical protein;protein_id=OFO28184.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 31833 33263 . + . ID=gene-HMPREF3052_06290;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HMPREF3052_06290 GCA_001815685.1|KV821633.1 Protein Homology CDS 31833 33263 . + 0 ID=cds-OFO28185.1;Parent=gene-HMPREF3052_06290;Dbxref=NCBI_GP:OFO28185.1;Name=OFO28185.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003698528.1;locus_tag=HMPREF3052_06290;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=OFO28185.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 33343 34347 . + . ID=gene-HMPREF3052_06295;Name=HMPREF3052_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06295 GCA_001815685.1|KV821633.1 Protein Homology CDS 33343 34347 . + 0 ID=cds-OFO28186.1;Parent=gene-HMPREF3052_06295;Dbxref=NCBI_GP:OFO28186.1;Name=OFO28186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213233.1;locus_tag=HMPREF3052_06295;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=OFO28186.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 34582 36690 . - . ID=gene-HMPREF3052_06300;Name=HMPREF3052_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06300 GCA_001815685.1|KV821633.1 Protein Homology CDS 34582 36690 . - 0 ID=cds-OFO28187.1;Parent=gene-HMPREF3052_06300;Dbxref=NCBI_GP:OFO28187.1;Name=OFO28187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685128.1;locus_tag=HMPREF3052_06300;product=lytic transglycosylase;protein_id=OFO28187.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 36846 37505 . + . ID=gene-HMPREF3052_06305;Name=HMPREF3052_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06305 GCA_001815685.1|KV821633.1 Protein Homology CDS 36846 37505 . + 0 ID=cds-OFO28188.1;Parent=gene-HMPREF3052_06305;Dbxref=NCBI_GP:OFO28188.1;Name=OFO28188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448994.1;locus_tag=HMPREF3052_06305;product=methyltransferase;protein_id=OFO28188.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 37549 38376 . + . ID=gene-HMPREF3052_06310;Name=HMPREF3052_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06310 GCA_001815685.1|KV821633.1 Protein Homology CDS 37549 38376 . + 0 ID=cds-OFO28209.1;Parent=gene-HMPREF3052_06310;Dbxref=NCBI_GP:OFO28209.1;Name=OFO28209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255798.1;locus_tag=HMPREF3052_06310;product=DNA-formamidopyrimidine glycosylase;protein_id=OFO28209.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 38441 39226 . + . ID=gene-HMPREF3052_06315;Name=HMPREF3052_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06315 GCA_001815685.1|KV821633.1 Protein Homology CDS 38441 39226 . + 0 ID=cds-OFO28189.1;Parent=gene-HMPREF3052_06315;Dbxref=NCBI_GP:OFO28189.1;Name=OFO28189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747252.1;locus_tag=HMPREF3052_06315;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFO28189.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 39415 40152 . + . ID=gene-HMPREF3052_06320;Name=HMPREF3052_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06320 GCA_001815685.1|KV821633.1 Protein Homology CDS 39415 40152 . + 0 ID=cds-OFO28190.1;Parent=gene-HMPREF3052_06320;Dbxref=NCBI_GP:OFO28190.1;Name=OFO28190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687708.1;locus_tag=HMPREF3052_06320;product=glutathione peroxidase;protein_id=OFO28190.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 40406 41812 . + . ID=gene-HMPREF3052_06325;Name=HMPREF3052_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06325 GCA_001815685.1|KV821633.1 Protein Homology CDS 40406 41812 . + 0 ID=cds-OFO28191.1;Parent=gene-HMPREF3052_06325;Dbxref=NCBI_GP:OFO28191.1;Name=OFO28191.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747249.1;locus_tag=HMPREF3052_06325;product=dihydrolipoamide dehydrogenase;protein_id=OFO28191.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 41886 43016 . - . ID=gene-HMPREF3052_06330;Name=HMPREF3052_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06330 GCA_001815685.1|KV821633.1 Protein Homology CDS 41886 43016 . - 0 ID=cds-OFO28192.1;Parent=gene-HMPREF3052_06330;Dbxref=NCBI_GP:OFO28192.1;Name=OFO28192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520139.1;locus_tag=HMPREF3052_06330;product=type IV pili twitching motility protein PilT;protein_id=OFO28192.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 43220 43921 . + . ID=gene-HMPREF3052_06335;Name=HMPREF3052_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06335 GCA_001815685.1|KV821633.1 Protein Homology CDS 43220 43921 . + 0 ID=cds-OFO28193.1;Parent=gene-HMPREF3052_06335;Dbxref=NCBI_GP:OFO28193.1;Name=OFO28193.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357299.1;locus_tag=HMPREF3052_06335;product=5'-methylthioadenosine nucleosidase;protein_id=OFO28193.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 44054 45847 . + . ID=gene-HMPREF3052_06340;Name=HMPREF3052_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06340 GCA_001815685.1|KV821633.1 Protein Homology CDS 44054 45847 . + 0 ID=cds-OFO28194.1;Parent=gene-HMPREF3052_06340;Dbxref=NCBI_GP:OFO28194.1;Name=OFO28194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575259.1;locus_tag=HMPREF3052_06340;product=elongation factor 4;protein_id=OFO28194.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 45847 46866 . + . ID=gene-HMPREF3052_06345;Name=HMPREF3052_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06345 GCA_001815685.1|KV821633.1 Protein Homology CDS 45847 46866 . + 0 ID=cds-OFO28195.1;Parent=gene-HMPREF3052_06345;Dbxref=NCBI_GP:OFO28195.1;Name=OFO28195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232071.1;locus_tag=HMPREF3052_06345;product=S26 family signal peptidase;protein_id=OFO28195.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 46919 47797 . - . ID=gene-HMPREF3052_06350;Name=HMPREF3052_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06350 GCA_001815685.1|KV821633.1 Protein Homology CDS 46919 47797 . - 0 ID=cds-OFO28196.1;Parent=gene-HMPREF3052_06350;Dbxref=NCBI_GP:OFO28196.1;Name=OFO28196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685130.1;locus_tag=HMPREF3052_06350;product=hypothetical protein;protein_id=OFO28196.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 48034 48573 . + . ID=gene-HMPREF3052_06355;Name=HMPREF3052_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06355 GCA_001815685.1|KV821633.1 Protein Homology CDS 48034 48573 . + 0 ID=cds-OFO28210.1;Parent=gene-HMPREF3052_06355;Dbxref=NCBI_GP:OFO28210.1;Name=OFO28210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747238.1;locus_tag=HMPREF3052_06355;product=gamma carbonic anhydrase family protein;protein_id=OFO28210.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 48588 49187 . + . ID=gene-HMPREF3052_06360;Name=HMPREF3052_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06360 GCA_001815685.1|KV821633.1 Protein Homology CDS 48588 49187 . + 0 ID=cds-OFO28197.1;Parent=gene-HMPREF3052_06360;Dbxref=NCBI_GP:OFO28197.1;Name=OFO28197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747236.1;locus_tag=HMPREF3052_06360;product=septum formation inhibitor Maf;protein_id=OFO28197.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 49276 50055 . + . ID=gene-HMPREF3052_06365;Name=HMPREF3052_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06365 GCA_001815685.1|KV821633.1 Protein Homology CDS 49276 50055 . + 0 ID=cds-OFO28198.1;Parent=gene-HMPREF3052_06365;Dbxref=NCBI_GP:OFO28198.1;Name=OFO28198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271458.1;locus_tag=HMPREF3052_06365;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=OFO28198.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 50117 50386 . + . ID=gene-HMPREF3052_06370;Name=HMPREF3052_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06370 GCA_001815685.1|KV821633.1 Protein Homology CDS 50117 50386 . + 0 ID=cds-OFO28199.1;Parent=gene-HMPREF3052_06370;Dbxref=NCBI_GP:OFO28199.1;Name=OFO28199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747232.1;locus_tag=HMPREF3052_06370;product=hypothetical protein;protein_id=OFO28199.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 50386 51114 . + . ID=gene-HMPREF3052_06375;Name=HMPREF3052_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06375 GCA_001815685.1|KV821633.1 Protein Homology CDS 50386 51114 . + 0 ID=cds-OFO28200.1;Parent=gene-HMPREF3052_06375;Dbxref=NCBI_GP:OFO28200.1;Name=OFO28200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173913.1;locus_tag=HMPREF3052_06375;product=polar amino acid ABC transporter ATP-binding protein;protein_id=OFO28200.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 51178 51537 . + . ID=gene-HMPREF3052_06380;Name=HMPREF3052_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06380 GCA_001815685.1|KV821633.1 Protein Homology CDS 51178 51537 . + 0 ID=cds-OFO28201.1;Parent=gene-HMPREF3052_06380;Dbxref=NCBI_GP:OFO28201.1;Name=OFO28201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251194.1;locus_tag=HMPREF3052_06380;product=hypothetical protein;protein_id=OFO28201.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 51542 51994 . + . ID=gene-HMPREF3052_06385;Name=HMPREF3052_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06385 GCA_001815685.1|KV821633.1 Protein Homology CDS 51542 51994 . + 0 ID=cds-OFO28202.1;Parent=gene-HMPREF3052_06385;Dbxref=NCBI_GP:OFO28202.1;Name=OFO28202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747226.1;locus_tag=HMPREF3052_06385;product=transcriptional regulator;protein_id=OFO28202.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 52033 53316 . + . ID=gene-HMPREF3052_06390;Name=HMPREF3052_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06390 GCA_001815685.1|KV821633.1 Protein Homology CDS 52033 53316 . + 0 ID=cds-OFO28203.1;Parent=gene-HMPREF3052_06390;Dbxref=NCBI_GP:OFO28203.1;Name=OFO28203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685030.1;locus_tag=HMPREF3052_06390;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=OFO28203.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 53330 54478 . + . ID=gene-HMPREF3052_06395;Name=HMPREF3052_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06395 GCA_001815685.1|KV821633.1 Protein Homology CDS 53330 54478 . + 0 ID=cds-OFO28204.1;Parent=gene-HMPREF3052_06395;Dbxref=NCBI_GP:OFO28204.1;Name=OFO28204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464189.1;locus_tag=HMPREF3052_06395;product=cell division protein FtsN;protein_id=OFO28204.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 54471 55004 . + . ID=gene-HMPREF3052_06400;Name=HMPREF3052_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06400 GCA_001815685.1|KV821633.1 Protein Homology CDS 54471 55004 . + 0 ID=cds-OFO28205.1;Parent=gene-HMPREF3052_06400;Dbxref=NCBI_GP:OFO28205.1;Name=OFO28205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684965.1;locus_tag=HMPREF3052_06400;product=colicin V production protein;protein_id=OFO28205.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 55157 56701 . + . ID=gene-HMPREF3052_06405;Name=HMPREF3052_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06405 GCA_001815685.1|KV821633.1 Protein Homology CDS 55157 56701 . + 0 ID=cds-OFO28206.1;Parent=gene-HMPREF3052_06405;Dbxref=NCBI_GP:OFO28206.1;Name=OFO28206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251190.1;locus_tag=HMPREF3052_06405;product=amidophosphoribosyltransferase;protein_id=OFO28206.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 56776 57267 . + . ID=gene-HMPREF3052_06410;Name=HMPREF3052_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06410 GCA_001815685.1|KV821633.1 Protein Homology CDS 56776 57267 . + 0 ID=cds-OFO28207.1;Parent=gene-HMPREF3052_06410;Dbxref=NCBI_GP:OFO28207.1;Name=OFO28207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232005.1;locus_tag=HMPREF3052_06410;product=transcription elongation factor GreB;protein_id=OFO28207.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 57478 58089 . - . ID=gene-HMPREF3052_06415;Name=HMPREF3052_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06415 GCA_001815685.1|KV821633.1 Protein Homology CDS 57478 58089 . - 0 ID=cds-OFO28159.1;Parent=gene-HMPREF3052_06415;Dbxref=NCBI_GP:OFO28159.1;Name=OFO28159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520155.1;locus_tag=HMPREF3052_06415;product=glycerol-3-phosphate acyltransferase;protein_id=OFO28159.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 58148 58498 . + . ID=gene-HMPREF3052_06420;Name=HMPREF3052_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06420 GCA_001815685.1|KV821633.1 Protein Homology CDS 58148 58498 . + 0 ID=cds-OFO28160.1;Parent=gene-HMPREF3052_06420;Dbxref=NCBI_GP:OFO28160.1;Name=OFO28160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684997.1;locus_tag=HMPREF3052_06420;product=dienelactone hydrolase;protein_id=OFO28160.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 58572 59108 . + . ID=gene-HMPREF3052_06425;Name=HMPREF3052_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06425 GCA_001815685.1|KV821633.1 Protein Homology CDS 58572 59108 . + 0 ID=cds-OFO28161.1;Parent=gene-HMPREF3052_06425;Dbxref=NCBI_GP:OFO28161.1;Name=OFO28161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754827.1;locus_tag=HMPREF3052_06425;product=ADP-ribose pyrophosphatase;protein_id=OFO28161.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 59239 59877 . - . ID=gene-HMPREF3052_06430;Name=HMPREF3052_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06430 GCA_001815685.1|KV821633.1 Protein Homology CDS 59239 59877 . - 0 ID=cds-OFO28162.1;Parent=gene-HMPREF3052_06430;Dbxref=NCBI_GP:OFO28162.1;Name=OFO28162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684901.1;locus_tag=HMPREF3052_06430;product=alpha/beta hydrolase;protein_id=OFO28162.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 59917 60711 . - . ID=gene-HMPREF3052_06435;Name=HMPREF3052_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06435 GCA_001815685.1|KV821633.1 Protein Homology CDS 59917 60711 . - 0 ID=cds-OFO28163.1;Parent=gene-HMPREF3052_06435;Dbxref=NCBI_GP:OFO28163.1;Name=OFO28163.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747205.1;locus_tag=HMPREF3052_06435;product=spermidine synthase;protein_id=OFO28163.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 60927 61002 . + . ID=gene-HMPREF3052_06440;Name=HMPREF3052_06440;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_06440 GCA_001815685.1|KV821633.1 tRNAscan-SE tRNA 60927 61002 . + . ID=rna-HMPREF3052_06440;Parent=gene-HMPREF3052_06440;anticodon=(pos:60960..60962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_06440;product=tRNA-Thr GCA_001815685.1|KV821633.1 tRNAscan-SE exon 60927 61002 . + . ID=exon-HMPREF3052_06440-1;Parent=rna-HMPREF3052_06440;anticodon=(pos:60960..60962);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_06440;product=tRNA-Thr GCA_001815685.1|KV821633.1 Genbank gene 61039 61114 . + . ID=gene-HMPREF3052_06445;Name=HMPREF3052_06445;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_06445 GCA_001815685.1|KV821633.1 tRNAscan-SE tRNA 61039 61114 . + . ID=rna-HMPREF3052_06445;Parent=gene-HMPREF3052_06445;anticodon=(pos:61072..61074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_06445;product=tRNA-Thr GCA_001815685.1|KV821633.1 tRNAscan-SE exon 61039 61114 . + . ID=exon-HMPREF3052_06445-1;Parent=rna-HMPREF3052_06445;anticodon=(pos:61072..61074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_06445;product=tRNA-Thr GCA_001815685.1|KV821633.1 Genbank gene 61243 62034 . + . ID=gene-HMPREF3052_06450;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HMPREF3052_06450 GCA_001815685.1|KV821633.1 Protein Homology CDS 61243 62034 . + 0 ID=cds-OFO28164.1;Parent=gene-HMPREF3052_06450;Dbxref=NCBI_GP:OFO28164.1;Name=OFO28164.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685230.1;locus_tag=HMPREF3052_06450;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=OFO28164.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 62154 62990 . + . ID=gene-HMPREF3052_06455;Name=HMPREF3052_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06455 GCA_001815685.1|KV821633.1 Protein Homology CDS 62154 62990 . + 0 ID=cds-OFO28165.1;Parent=gene-HMPREF3052_06455;Dbxref=NCBI_GP:OFO28165.1;Name=OFO28165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747200.1;locus_tag=HMPREF3052_06455;product=pantoate--beta-alanine ligase;protein_id=OFO28165.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 63079 65688 . + . ID=gene-HMPREF3052_06460;Name=HMPREF3052_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06460 GCA_001815685.1|KV821633.1 Protein Homology CDS 63079 65688 . + 0 ID=cds-OFO28166.1;Parent=gene-HMPREF3052_06460;Dbxref=NCBI_GP:OFO28166.1;Name=OFO28166.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685242.1;locus_tag=HMPREF3052_06460;product=DNA mismatch repair protein MutS;protein_id=OFO28166.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 65726 66577 . + . ID=gene-HMPREF3052_06465;Name=HMPREF3052_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06465 GCA_001815685.1|KV821633.1 Protein Homology CDS 65726 66577 . + 0 ID=cds-OFO28167.1;Parent=gene-HMPREF3052_06465;Dbxref=NCBI_GP:OFO28167.1;Name=OFO28167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521075.1;locus_tag=HMPREF3052_06465;product=hypothetical protein;protein_id=OFO28167.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 66621 67451 . - . ID=gene-HMPREF3052_06470;Name=HMPREF3052_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06470 GCA_001815685.1|KV821633.1 Protein Homology CDS 66621 67451 . - 0 ID=cds-OFO28168.1;Parent=gene-HMPREF3052_06470;Dbxref=NCBI_GP:OFO28168.1;Name=OFO28168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676801.1;locus_tag=HMPREF3052_06470;product=hypothetical protein;protein_id=OFO28168.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 67833 68888 . + . ID=gene-HMPREF3052_06475;Name=HMPREF3052_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06475 GCA_001815685.1|KV821633.1 Protein Homology CDS 67833 68888 . + 0 ID=cds-OFO28169.1;Parent=gene-HMPREF3052_06475;Dbxref=NCBI_GP:OFO28169.1;Name=OFO28169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684948.1;locus_tag=HMPREF3052_06475;product=sulfate ABC transporter substrate-binding protein;protein_id=OFO28169.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 68966 70024 . + . ID=gene-HMPREF3052_06480;Name=HMPREF3052_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06480 GCA_001815685.1|KV821633.1 Protein Homology CDS 68966 70024 . + 0 ID=cds-OFO28170.1;Parent=gene-HMPREF3052_06480;Dbxref=NCBI_GP:OFO28170.1;Name=OFO28170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685309.1;locus_tag=HMPREF3052_06480;product=DNA polymerase IV;protein_id=OFO28170.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 70162 73818 . - . ID=gene-HMPREF3052_06485;Name=HMPREF3052_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06485 GCA_001815685.1|KV821633.1 Protein Homology CDS 70162 73818 . - 0 ID=cds-OFO28171.1;Parent=gene-HMPREF3052_06485;Dbxref=NCBI_GP:OFO28171.1;Name=OFO28171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002261402.1;locus_tag=HMPREF3052_06485;product=exodeoxyribonuclease V subunit beta;protein_id=OFO28171.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 73964 74662 . - . ID=gene-HMPREF3052_06490;Name=HMPREF3052_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06490 GCA_001815685.1|KV821633.1 GeneMarkS+ CDS 73964 74662 . - 0 ID=cds-OFO28172.1;Parent=gene-HMPREF3052_06490;Dbxref=NCBI_GP:OFO28172.1;Name=OFO28172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06490;product=hypothetical protein;protein_id=OFO28172.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank pseudogene 75096 75572 . - . ID=gene-HMPREF3052_06495;Name=HMPREF3052_06495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06495;pseudo=true GCA_001815685.1|KV821633.1 Protein Homology CDS 75096 75572 . - 0 ID=cds-HMPREF3052_06495;Parent=gene-HMPREF3052_06495;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822036.1;locus_tag=HMPREF3052_06495;product=cytoplasmic protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821633.1 Genbank gene 75575 75901 . - . ID=gene-HMPREF3052_06500;Name=HMPREF3052_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06500 GCA_001815685.1|KV821633.1 GeneMarkS+ CDS 75575 75901 . - 0 ID=cds-OFO28173.1;Parent=gene-HMPREF3052_06500;Dbxref=NCBI_GP:OFO28173.1;Name=OFO28173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06500;product=hypothetical protein;protein_id=OFO28173.1;transl_table=11 GCA_001815685.1|KV821633.1 Genbank pseudogene 76026 76623 . + . ID=gene-HMPREF3052_06505;Name=HMPREF3052_06505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06505;pseudo=true GCA_001815685.1|KV821633.1 Protein Homology CDS 76026 76623 . + 1 ID=cds-HMPREF3052_06505;Parent=gene-HMPREF3052_06505;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006252036.1;locus_tag=HMPREF3052_06505;product=terminase;pseudo=true;transl_table=11 ##sequence-region KV821634.1 1 5337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821634.1 Genbank region 1 5337 . + . ID=KV821634.1:1..5337;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821634.1 Genbank gene 117 2597 . - . ID=gene-HMPREF3052_06510;Name=HMPREF3052_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06510 GCA_001815685.1|KV821634.1 Protein Homology CDS 117 2597 . - 0 ID=cds-OFO28144.1;Parent=gene-HMPREF3052_06510;Dbxref=NCBI_GP:OFO28144.1;Name=OFO28144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681078.1;locus_tag=HMPREF3052_06510;product=glycogen phosphorylase;protein_id=OFO28144.1;transl_table=11 GCA_001815685.1|KV821634.1 Genbank pseudogene 2911 4850 . - . ID=gene-HMPREF3052_06515;Name=HMPREF3052_06515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06515;pseudo=true GCA_001815685.1|KV821634.1 Protein Homology CDS 2911 4850 . - 0 ID=cds-HMPREF3052_06515;Parent=gene-HMPREF3052_06515;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen%3B frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742009.1;locus_tag=HMPREF3052_06515;product=glycogen debranching enzyme;pseudo=true;transl_table=11 GCA_001815685.1|KV821634.1 Genbank pseudogene 4995 5337 . - . ID=gene-HMPREF3052_06520;Name=HMPREF3052_06520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06520;pseudo=true GCA_001815685.1|KV821634.1 Protein Homology CDS 4995 5337 . - 1 ID=cds-HMPREF3052_06520;Parent=gene-HMPREF3052_06520;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760212.1;locus_tag=HMPREF3052_06520;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV821635.1 1 217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821635.1 Genbank region 1 217 . + . ID=KV821635.1:1..217;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821636.1 1 6787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821636.1 Genbank region 1 6787 . + . ID=KV821636.1:1..6787;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821636.1 Genbank pseudogene 1 451 . + . ID=gene-HMPREF3052_06525;Name=HMPREF3052_06525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06525;pseudo=true GCA_001815685.1|KV821636.1 GeneMarkS+ CDS 1 451 . + 1 ID=cds-HMPREF3052_06525;Parent=gene-HMPREF3052_06525;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06525;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 460 741 . + . ID=gene-HMPREF3052_06530;Name=HMPREF3052_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06530 GCA_001815685.1|KV821636.1 Protein Homology CDS 460 741 . + 0 ID=cds-OFO28111.1;Parent=gene-HMPREF3052_06530;Dbxref=NCBI_GP:OFO28111.1;Name=OFO28111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248044.1;locus_tag=HMPREF3052_06530;product=hypothetical protein;protein_id=OFO28111.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 744 1916 . + . ID=gene-HMPREF3052_06535;Name=HMPREF3052_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06535 GCA_001815685.1|KV821636.1 GeneMarkS+ CDS 744 1916 . + 0 ID=cds-OFO28112.1;Parent=gene-HMPREF3052_06535;Dbxref=NCBI_GP:OFO28112.1;Name=OFO28112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06535;product=hypothetical protein;protein_id=OFO28112.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 2084 2377 . + . ID=gene-HMPREF3052_06540;Name=HMPREF3052_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06540 GCA_001815685.1|KV821636.1 GeneMarkS+ CDS 2084 2377 . + 0 ID=cds-OFO28113.1;Parent=gene-HMPREF3052_06540;Dbxref=NCBI_GP:OFO28113.1;Name=OFO28113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06540;product=hypothetical protein;protein_id=OFO28113.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 2449 2973 . + . ID=gene-HMPREF3052_06545;Name=HMPREF3052_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06545 GCA_001815685.1|KV821636.1 GeneMarkS+ CDS 2449 2973 . + 0 ID=cds-OFO28114.1;Parent=gene-HMPREF3052_06545;Dbxref=NCBI_GP:OFO28114.1;Name=OFO28114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06545;product=hypothetical protein;protein_id=OFO28114.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 3024 3230 . + . ID=gene-HMPREF3052_06550;Name=HMPREF3052_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06550 GCA_001815685.1|KV821636.1 Protein Homology CDS 3024 3230 . + 0 ID=cds-OFO28115.1;Parent=gene-HMPREF3052_06550;Dbxref=NCBI_GP:OFO28115.1;Name=OFO28115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255676.1;locus_tag=HMPREF3052_06550;product=transcriptional regulator;protein_id=OFO28115.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 3339 3560 . + . ID=gene-HMPREF3052_06555;Name=HMPREF3052_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06555 GCA_001815685.1|KV821636.1 GeneMarkS+ CDS 3339 3560 . + 0 ID=cds-OFO28116.1;Parent=gene-HMPREF3052_06555;Dbxref=NCBI_GP:OFO28116.1;Name=OFO28116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06555;product=hypothetical protein;protein_id=OFO28116.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 3604 3960 . + . ID=gene-HMPREF3052_06560;Name=HMPREF3052_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06560 GCA_001815685.1|KV821636.1 Protein Homology CDS 3604 3960 . + 0 ID=cds-OFO28117.1;Parent=gene-HMPREF3052_06560;Dbxref=NCBI_GP:OFO28117.1;Name=OFO28117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238681.1;locus_tag=HMPREF3052_06560;product=hypothetical protein;protein_id=OFO28117.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 4355 5305 . + . ID=gene-HMPREF3052_06565;Name=HMPREF3052_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06565 GCA_001815685.1|KV821636.1 Protein Homology CDS 4355 5305 . + 0 ID=cds-OFO28118.1;Parent=gene-HMPREF3052_06565;Dbxref=NCBI_GP:OFO28118.1;Name=OFO28118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273447.1;locus_tag=HMPREF3052_06565;product=transposase;protein_id=OFO28118.1;transl_table=11 GCA_001815685.1|KV821636.1 Genbank gene 5477 6667 . - . ID=gene-HMPREF3052_06570;Name=HMPREF3052_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06570 GCA_001815685.1|KV821636.1 Protein Homology CDS 5477 6667 . - 0 ID=cds-OFO28119.1;Parent=gene-HMPREF3052_06570;Dbxref=NCBI_GP:OFO28119.1;Name=OFO28119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685143.1;locus_tag=HMPREF3052_06570;product=succinyldiaminopimelate transaminase;protein_id=OFO28119.1;transl_table=11 ##sequence-region KV821637.1 1 370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821637.1 Genbank region 1 370 . + . ID=KV821637.1:1..370;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821638.1 1 54314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821638.1 Genbank region 1 54314 . + . ID=KV821638.1:1..54314;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821638.1 Genbank gene 183 1031 . + . ID=gene-HMPREF3052_06575;Name=HMPREF3052_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06575 GCA_001815685.1|KV821638.1 Protein Homology CDS 183 1031 . + 0 ID=cds-OFO27994.1;Parent=gene-HMPREF3052_06575;Dbxref=NCBI_GP:OFO27994.1;Name=OFO27994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520626.1;locus_tag=HMPREF3052_06575;product=squalene synthase HpnD;protein_id=OFO27994.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 1028 2335 . + . ID=gene-HMPREF3052_06580;Name=HMPREF3052_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06580 GCA_001815685.1|KV821638.1 Protein Homology CDS 1028 2335 . + 0 ID=cds-OFO27995.1;Parent=gene-HMPREF3052_06580;Dbxref=NCBI_GP:OFO27995.1;Name=OFO27995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747585.1;locus_tag=HMPREF3052_06580;product=oxidoreductase;protein_id=OFO27995.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 2431 3150 . + . ID=gene-HMPREF3052_06585;Name=HMPREF3052_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06585 GCA_001815685.1|KV821638.1 Protein Homology CDS 2431 3150 . + 0 ID=cds-OFO27996.1;Parent=gene-HMPREF3052_06585;Dbxref=NCBI_GP:OFO27996.1;Name=OFO27996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688574.1;locus_tag=HMPREF3052_06585;product=NAD(P)-dependent oxidoreductase;protein_id=OFO27996.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 3338 4294 . + . ID=gene-HMPREF3052_06590;Name=HMPREF3052_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06590 GCA_001815685.1|KV821638.1 Protein Homology CDS 3338 4294 . + 0 ID=cds-OFO27997.1;Parent=gene-HMPREF3052_06590;Dbxref=NCBI_GP:OFO27997.1;Name=OFO27997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709886.1;locus_tag=HMPREF3052_06590;product=thiamine-monophosphate kinase;protein_id=OFO27997.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 4287 4775 . + . ID=gene-HMPREF3052_06595;Name=HMPREF3052_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06595 GCA_001815685.1|KV821638.1 Protein Homology CDS 4287 4775 . + 0 ID=cds-OFO28035.1;Parent=gene-HMPREF3052_06595;Dbxref=NCBI_GP:OFO28035.1;Name=OFO28035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685386.1;locus_tag=HMPREF3052_06595;product=phosphatidylglycerophosphatase;protein_id=OFO28035.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 4872 5240 . + . ID=gene-HMPREF3052_06600;Name=HMPREF3052_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06600 GCA_001815685.1|KV821638.1 Protein Homology CDS 4872 5240 . + 0 ID=cds-OFO27998.1;Parent=gene-HMPREF3052_06600;Dbxref=NCBI_GP:OFO27998.1;Name=OFO27998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520630.1;locus_tag=HMPREF3052_06600;product=Co2+/Mg2+ efflux protein ApaG;protein_id=OFO27998.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 5299 5595 . - . ID=gene-HMPREF3052_06605;Name=HMPREF3052_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06605 GCA_001815685.1|KV821638.1 Protein Homology CDS 5299 5595 . - 0 ID=cds-OFO27999.1;Parent=gene-HMPREF3052_06605;Dbxref=NCBI_GP:OFO27999.1;Name=OFO27999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520632.1;locus_tag=HMPREF3052_06605;product=hypothetical protein;protein_id=OFO27999.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 5672 5869 . + . ID=gene-HMPREF3052_06610;Name=HMPREF3052_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06610 GCA_001815685.1|KV821638.1 Protein Homology CDS 5672 5869 . + 0 ID=cds-OFO28036.1;Parent=gene-HMPREF3052_06610;Dbxref=NCBI_GP:OFO28036.1;Name=OFO28036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283453.1;locus_tag=HMPREF3052_06610;product=hypothetical protein;protein_id=OFO28036.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 5836 6591 . + . ID=gene-HMPREF3052_06615;Name=HMPREF3052_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06615 GCA_001815685.1|KV821638.1 Protein Homology CDS 5836 6591 . + 0 ID=cds-OFO28000.1;Parent=gene-HMPREF3052_06615;Dbxref=NCBI_GP:OFO28000.1;Name=OFO28000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685374.1;locus_tag=HMPREF3052_06615;product=ABC transporter ATP-binding protein;protein_id=OFO28000.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 6668 7543 . + . ID=gene-HMPREF3052_06620;Name=HMPREF3052_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06620 GCA_001815685.1|KV821638.1 Protein Homology CDS 6668 7543 . + 0 ID=cds-OFO28001.1;Parent=gene-HMPREF3052_06620;Dbxref=NCBI_GP:OFO28001.1;Name=OFO28001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747573.1;locus_tag=HMPREF3052_06620;product=zinc ABC transporter permease;protein_id=OFO28001.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 7584 8528 . + . ID=gene-HMPREF3052_06625;Name=HMPREF3052_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06625 GCA_001815685.1|KV821638.1 Protein Homology CDS 7584 8528 . + 0 ID=cds-OFO28002.1;Parent=gene-HMPREF3052_06625;Dbxref=NCBI_GP:OFO28002.1;Name=OFO28002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520634.1;locus_tag=HMPREF3052_06625;product=ABC transporter substrate-binding protein;protein_id=OFO28002.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 8796 10133 . + . ID=gene-HMPREF3052_06630;Name=HMPREF3052_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06630 GCA_001815685.1|KV821638.1 Protein Homology CDS 8796 10133 . + 0 ID=cds-OFO28003.1;Parent=gene-HMPREF3052_06630;Dbxref=NCBI_GP:OFO28003.1;Name=OFO28003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520635.1;locus_tag=HMPREF3052_06630;product=transporter;protein_id=OFO28003.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 10261 12237 . - . ID=gene-HMPREF3052_06635;Name=HMPREF3052_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06635 GCA_001815685.1|KV821638.1 Protein Homology CDS 10261 12237 . - 0 ID=cds-OFO28004.1;Parent=gene-HMPREF3052_06635;Dbxref=NCBI_GP:OFO28004.1;Name=OFO28004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747567.1;locus_tag=HMPREF3052_06635;product=TonB-dependent copper receptor;protein_id=OFO28004.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 12667 13440 . + . ID=gene-HMPREF3052_06640;Name=HMPREF3052_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06640 GCA_001815685.1|KV821638.1 Protein Homology CDS 12667 13440 . + 0 ID=cds-OFO28005.1;Parent=gene-HMPREF3052_06640;Dbxref=NCBI_GP:OFO28005.1;Name=OFO28005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520637.1;locus_tag=HMPREF3052_06640;product=GntR family transcriptional regulator;protein_id=OFO28005.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 13551 14744 . + . ID=gene-HMPREF3052_06645;Name=HMPREF3052_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06645 GCA_001815685.1|KV821638.1 Protein Homology CDS 13551 14744 . + 0 ID=cds-OFO28006.1;Parent=gene-HMPREF3052_06645;Dbxref=NCBI_GP:OFO28006.1;Name=OFO28006.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174127.1;locus_tag=HMPREF3052_06645;product=aromatic amino acid aminotransferase;protein_id=OFO28006.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 14836 14911 . - . ID=gene-HMPREF3052_06650;Name=HMPREF3052_06650;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_06650 GCA_001815685.1|KV821638.1 tRNAscan-SE tRNA 14836 14911 . - . ID=rna-HMPREF3052_06650;Parent=gene-HMPREF3052_06650;anticodon=(pos:complement(14876..14878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_06650;product=tRNA-Arg GCA_001815685.1|KV821638.1 tRNAscan-SE exon 14836 14911 . - . ID=exon-HMPREF3052_06650-1;Parent=rna-HMPREF3052_06650;anticodon=(pos:complement(14876..14878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_06650;product=tRNA-Arg GCA_001815685.1|KV821638.1 Genbank gene 15197 16054 . + . ID=gene-HMPREF3052_06655;Name=HMPREF3052_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06655 GCA_001815685.1|KV821638.1 Protein Homology CDS 15197 16054 . + 0 ID=cds-OFO28007.1;Parent=gene-HMPREF3052_06655;Dbxref=NCBI_GP:OFO28007.1;Name=OFO28007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582195.1;locus_tag=HMPREF3052_06655;product=cytochrome;protein_id=OFO28007.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 16254 17591 . + . ID=gene-HMPREF3052_06660;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF3052_06660 GCA_001815685.1|KV821638.1 Protein Homology CDS 16254 17591 . + 0 ID=cds-OFO28008.1;Parent=gene-HMPREF3052_06660;Dbxref=NCBI_GP:OFO28008.1;Name=OFO28008.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743468.1;locus_tag=HMPREF3052_06660;product=phosphoglucosamine mutase;protein_id=OFO28008.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 17668 18288 . - . ID=gene-HMPREF3052_06665;Name=HMPREF3052_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06665 GCA_001815685.1|KV821638.1 Protein Homology CDS 17668 18288 . - 0 ID=cds-OFO28009.1;Parent=gene-HMPREF3052_06665;Dbxref=NCBI_GP:OFO28009.1;Name=OFO28009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520641.1;locus_tag=HMPREF3052_06665;product=outer membrane lipoprotein carrier protein LolA;protein_id=OFO28009.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 18578 19408 . + . ID=gene-HMPREF3052_06670;Name=HMPREF3052_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06670 GCA_001815685.1|KV821638.1 Protein Homology CDS 18578 19408 . + 0 ID=cds-OFO28010.1;Parent=gene-HMPREF3052_06670;Dbxref=NCBI_GP:OFO28010.1;Name=OFO28010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520643.1;locus_tag=HMPREF3052_06670;product=hypothetical protein;protein_id=OFO28010.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 19424 20368 . + . ID=gene-HMPREF3052_06675;Name=HMPREF3052_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06675 GCA_001815685.1|KV821638.1 Protein Homology CDS 19424 20368 . + 0 ID=cds-OFO28011.1;Parent=gene-HMPREF3052_06675;Dbxref=NCBI_GP:OFO28011.1;Name=OFO28011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520644.1;locus_tag=HMPREF3052_06675;product=hypothetical protein;protein_id=OFO28011.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 20438 21088 . + . ID=gene-HMPREF3052_06680;Name=HMPREF3052_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06680 GCA_001815685.1|KV821638.1 Protein Homology CDS 20438 21088 . + 0 ID=cds-OFO28012.1;Parent=gene-HMPREF3052_06680;Dbxref=NCBI_GP:OFO28012.1;Name=OFO28012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520645.1;locus_tag=HMPREF3052_06680;product=phosphoglycolate phosphatase;protein_id=OFO28012.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 21188 22381 . + . ID=gene-HMPREF3052_06685;Name=HMPREF3052_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06685 GCA_001815685.1|KV821638.1 Protein Homology CDS 21188 22381 . + 0 ID=cds-OFO28013.1;Parent=gene-HMPREF3052_06685;Dbxref=NCBI_GP:OFO28013.1;Name=OFO28013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217853.1;locus_tag=HMPREF3052_06685;product=aromatic amino acid aminotransferase;protein_id=OFO28013.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 22450 22863 . - . ID=gene-HMPREF3052_06690;Name=HMPREF3052_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06690 GCA_001815685.1|KV821638.1 Protein Homology CDS 22450 22863 . - 0 ID=cds-OFO28014.1;Parent=gene-HMPREF3052_06690;Dbxref=NCBI_GP:OFO28014.1;Name=OFO28014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682536.1;locus_tag=HMPREF3052_06690;product=hypothetical protein;protein_id=OFO28014.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 23139 24362 . + . ID=gene-HMPREF3052_06695;Name=HMPREF3052_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06695 GCA_001815685.1|KV821638.1 Protein Homology CDS 23139 24362 . + 0 ID=cds-OFO28015.1;Parent=gene-HMPREF3052_06695;Dbxref=NCBI_GP:OFO28015.1;Name=OFO28015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685299.1;locus_tag=HMPREF3052_06695;product=MFS transporter;protein_id=OFO28015.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 24455 25078 . + . ID=gene-HMPREF3052_06700;Name=HMPREF3052_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06700 GCA_001815685.1|KV821638.1 Protein Homology CDS 24455 25078 . + 0 ID=cds-OFO28016.1;Parent=gene-HMPREF3052_06700;Dbxref=NCBI_GP:OFO28016.1;Name=OFO28016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520649.1;locus_tag=HMPREF3052_06700;product=acetyltransferase;protein_id=OFO28016.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 25259 26638 . + . ID=gene-HMPREF3052_06705;Name=HMPREF3052_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06705 GCA_001815685.1|KV821638.1 Protein Homology CDS 25259 26638 . + 0 ID=cds-OFO28017.1;Parent=gene-HMPREF3052_06705;Dbxref=NCBI_GP:OFO28017.1;Name=OFO28017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252825.1;locus_tag=HMPREF3052_06705;product=Na+/H+ antiporter NhaC;protein_id=OFO28017.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 26774 27403 . + . ID=gene-HMPREF3052_06710;Name=HMPREF3052_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06710 GCA_001815685.1|KV821638.1 Protein Homology CDS 26774 27403 . + 0 ID=cds-OFO28018.1;Parent=gene-HMPREF3052_06710;Dbxref=NCBI_GP:OFO28018.1;Name=OFO28018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174576.1;locus_tag=HMPREF3052_06710;product=endonuclease III;protein_id=OFO28018.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 27460 31068 . - . ID=gene-HMPREF3052_06715;Name=HMPREF3052_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06715 GCA_001815685.1|KV821638.1 Protein Homology CDS 27460 31068 . - 0 ID=cds-OFO28019.1;Parent=gene-HMPREF3052_06715;Dbxref=NCBI_GP:OFO28019.1;Name=OFO28019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747536.1;locus_tag=HMPREF3052_06715;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=OFO28019.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 31300 32826 . - . ID=gene-HMPREF3052_06720;Name=HMPREF3052_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06720 GCA_001815685.1|KV821638.1 Protein Homology CDS 31300 32826 . - 0 ID=cds-OFO28020.1;Parent=gene-HMPREF3052_06720;Dbxref=NCBI_GP:OFO28020.1;Name=OFO28020.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773641.1;locus_tag=HMPREF3052_06720;product=sodium:proline symporter;protein_id=OFO28020.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 33283 34077 . - . ID=gene-HMPREF3052_06725;Name=HMPREF3052_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06725 GCA_001815685.1|KV821638.1 Protein Homology CDS 33283 34077 . - 0 ID=cds-OFO28021.1;Parent=gene-HMPREF3052_06725;Dbxref=NCBI_GP:OFO28021.1;Name=OFO28021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286049.1;locus_tag=HMPREF3052_06725;product=transporter;protein_id=OFO28021.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 34328 36541 . - . ID=gene-HMPREF3052_06730;Name=HMPREF3052_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06730 GCA_001815685.1|KV821638.1 Protein Homology CDS 34328 36541 . - 0 ID=cds-OFO28022.1;Parent=gene-HMPREF3052_06730;Dbxref=NCBI_GP:OFO28022.1;Name=OFO28022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520657.1;locus_tag=HMPREF3052_06730;product=GTP pyrophosphokinase;protein_id=OFO28022.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 36630 37340 . + . ID=gene-HMPREF3052_06735;Name=HMPREF3052_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06735 GCA_001815685.1|KV821638.1 Protein Homology CDS 36630 37340 . + 0 ID=cds-OFO28023.1;Parent=gene-HMPREF3052_06735;Dbxref=NCBI_GP:OFO28023.1;Name=OFO28023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680240.1;locus_tag=HMPREF3052_06735;product=glutaredoxin;protein_id=OFO28023.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 37397 37915 . - . ID=gene-HMPREF3052_06740;Name=HMPREF3052_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06740 GCA_001815685.1|KV821638.1 Protein Homology CDS 37397 37915 . - 0 ID=cds-OFO28024.1;Parent=gene-HMPREF3052_06740;Dbxref=NCBI_GP:OFO28024.1;Name=OFO28024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687781.1;locus_tag=HMPREF3052_06740;product=hypothetical protein;protein_id=OFO28024.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 37915 39576 . - . ID=gene-HMPREF3052_06745;Name=HMPREF3052_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06745 GCA_001815685.1|KV821638.1 Protein Homology CDS 37915 39576 . - 0 ID=cds-OFO28025.1;Parent=gene-HMPREF3052_06745;Dbxref=NCBI_GP:OFO28025.1;Name=OFO28025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272693.1;locus_tag=HMPREF3052_06745;product=paraquat-inducible protein B;protein_id=OFO28025.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 39573 40778 . - . ID=gene-HMPREF3052_06750;Name=HMPREF3052_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06750 GCA_001815685.1|KV821638.1 Protein Homology CDS 39573 40778 . - 0 ID=cds-OFO28037.1;Parent=gene-HMPREF3052_06750;Dbxref=NCBI_GP:OFO28037.1;Name=OFO28037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520661.1;locus_tag=HMPREF3052_06750;product=PqiA family protein;protein_id=OFO28037.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 41286 41909 . + . ID=gene-HMPREF3052_06755;Name=HMPREF3052_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06755 GCA_001815685.1|KV821638.1 Protein Homology CDS 41286 41909 . + 0 ID=cds-OFO28026.1;Parent=gene-HMPREF3052_06755;Dbxref=NCBI_GP:OFO28026.1;Name=OFO28026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520663.1;locus_tag=HMPREF3052_06755;product=heme oxygenase;protein_id=OFO28026.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 42030 43571 . - . ID=gene-HMPREF3052_06760;Name=HMPREF3052_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06760 GCA_001815685.1|KV821638.1 Protein Homology CDS 42030 43571 . - 0 ID=cds-OFO28027.1;Parent=gene-HMPREF3052_06760;Dbxref=NCBI_GP:OFO28027.1;Name=OFO28027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685257.1;locus_tag=HMPREF3052_06760;product=hypothetical protein;protein_id=OFO28027.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 43940 44929 . + . ID=gene-HMPREF3052_06765;Name=HMPREF3052_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06765 GCA_001815685.1|KV821638.1 Protein Homology CDS 43940 44929 . + 0 ID=cds-OFO28028.1;Parent=gene-HMPREF3052_06765;Dbxref=NCBI_GP:OFO28028.1;Name=OFO28028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684889.1;locus_tag=HMPREF3052_06765;product=hemoglobin-haptoglobin-utilization protein;protein_id=OFO28028.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 44985 47402 . + . ID=gene-HMPREF3052_06770;Name=HMPREF3052_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06770 GCA_001815685.1|KV821638.1 Protein Homology CDS 44985 47402 . + 0 ID=cds-OFO28029.1;Parent=gene-HMPREF3052_06770;Dbxref=NCBI_GP:OFO28029.1;Name=OFO28029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685034.1;locus_tag=HMPREF3052_06770;product=ligand-gated channel protein;protein_id=OFO28029.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 47611 49221 . - . ID=gene-HMPREF3052_06775;Name=HMPREF3052_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06775 GCA_001815685.1|KV821638.1 Protein Homology CDS 47611 49221 . - 0 ID=cds-OFO28030.1;Parent=gene-HMPREF3052_06775;Dbxref=NCBI_GP:OFO28030.1;Name=OFO28030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747515.1;locus_tag=HMPREF3052_06775;product=oxidoreductase;protein_id=OFO28030.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank pseudogene 49347 49929 . + . ID=gene-HMPREF3052_06780;Name=HMPREF3052_06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06780;pseudo=true GCA_001815685.1|KV821638.1 Protein Homology CDS 49347 49929 . + 0 ID=cds-HMPREF3052_06780;Parent=gene-HMPREF3052_06780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520666.1;locus_tag=HMPREF3052_06780;product=protein-tyrosine-phosphatase;pseudo=true;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 50003 50821 . - . ID=gene-HMPREF3052_06785;Name=HMPREF3052_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06785 GCA_001815685.1|KV821638.1 Protein Homology CDS 50003 50821 . - 0 ID=cds-OFO28031.1;Parent=gene-HMPREF3052_06785;Dbxref=NCBI_GP:OFO28031.1;Name=OFO28031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270423.1;locus_tag=HMPREF3052_06785;product=serine acetyltransferase;protein_id=OFO28031.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 50972 51544 . + . ID=gene-HMPREF3052_06790;Name=HMPREF3052_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06790 GCA_001815685.1|KV821638.1 Protein Homology CDS 50972 51544 . + 0 ID=cds-OFO28032.1;Parent=gene-HMPREF3052_06790;Dbxref=NCBI_GP:OFO28032.1;Name=OFO28032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520668.1;locus_tag=HMPREF3052_06790;product=nucleotide exchange factor GrpE;protein_id=OFO28032.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 51849 53777 . + . ID=gene-HMPREF3052_06795;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HMPREF3052_06795 GCA_001815685.1|KV821638.1 Protein Homology CDS 51849 53777 . + 0 ID=cds-OFO28033.1;Parent=gene-HMPREF3052_06795;Dbxref=NCBI_GP:OFO28033.1;Name=OFO28033.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753851.1;locus_tag=HMPREF3052_06795;product=molecular chaperone DnaK;protein_id=OFO28033.1;transl_table=11 GCA_001815685.1|KV821638.1 Genbank gene 54045 54263 . + . ID=gene-HMPREF3052_06800;Name=HMPREF3052_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06800 GCA_001815685.1|KV821638.1 Protein Homology CDS 54045 54263 . + 0 ID=cds-OFO28034.1;Parent=gene-HMPREF3052_06800;Dbxref=NCBI_GP:OFO28034.1;Name=OFO28034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520671.1;locus_tag=HMPREF3052_06800;product=hypothetical protein;protein_id=OFO28034.1;transl_table=11 ##sequence-region KV821639.1 1 13326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821639.1 Genbank region 1 13326 . + . ID=KV821639.1:1..13326;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821639.1 Genbank gene 1 649 . + . ID=gene-HMPREF3052_06805;Name=HMPREF3052_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06805;partial=true;start_range=.,1 GCA_001815685.1|KV821639.1 Protein Homology CDS 1 649 . + 1 ID=cds-OFO27923.1;Parent=gene-HMPREF3052_06805;Dbxref=NCBI_GP:OFO27923.1;Name=OFO27923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520677.1;locus_tag=HMPREF3052_06805;partial=true;product=hypothetical protein;protein_id=OFO27923.1;start_range=.,1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 646 1104 . + . ID=gene-HMPREF3052_06810;Name=HMPREF3052_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06810 GCA_001815685.1|KV821639.1 Protein Homology CDS 646 1104 . + 0 ID=cds-OFO27924.1;Parent=gene-HMPREF3052_06810;Dbxref=NCBI_GP:OFO27924.1;Name=OFO27924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005606209.1;locus_tag=HMPREF3052_06810;product=hypothetical protein;protein_id=OFO27924.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 1097 1315 . + . ID=gene-HMPREF3052_06815;Name=HMPREF3052_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06815 GCA_001815685.1|KV821639.1 Protein Homology CDS 1097 1315 . + 0 ID=cds-OFO27925.1;Parent=gene-HMPREF3052_06815;Dbxref=NCBI_GP:OFO27925.1;Name=OFO27925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174539.1;locus_tag=HMPREF3052_06815;product=hypothetical protein;protein_id=OFO27925.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 1566 2558 . - . ID=gene-HMPREF3052_06820;Name=HMPREF3052_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06820 GCA_001815685.1|KV821639.1 Protein Homology CDS 1566 2558 . - 0 ID=cds-OFO27926.1;Parent=gene-HMPREF3052_06820;Dbxref=NCBI_GP:OFO27926.1;Name=OFO27926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003689040.1;locus_tag=HMPREF3052_06820;product=integrase;protein_id=OFO27926.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 2931 4154 . + . ID=gene-HMPREF3052_06825;Name=HMPREF3052_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06825 GCA_001815685.1|KV821639.1 Protein Homology CDS 2931 4154 . + 0 ID=cds-OFO27927.1;Parent=gene-HMPREF3052_06825;Dbxref=NCBI_GP:OFO27927.1;Name=OFO27927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763905.1;locus_tag=HMPREF3052_06825;product=integrase;protein_id=OFO27927.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 4359 5123 . + . ID=gene-HMPREF3052_06830;Name=HMPREF3052_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06830 GCA_001815685.1|KV821639.1 GeneMarkS+ CDS 4359 5123 . + 0 ID=cds-OFO27928.1;Parent=gene-HMPREF3052_06830;Dbxref=NCBI_GP:OFO27928.1;Name=OFO27928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06830;product=hypothetical protein;protein_id=OFO27928.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 5218 5421 . + . ID=gene-HMPREF3052_06835;Name=HMPREF3052_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06835 GCA_001815685.1|KV821639.1 Protein Homology CDS 5218 5421 . + 0 ID=cds-OFO27929.1;Parent=gene-HMPREF3052_06835;Dbxref=NCBI_GP:OFO27929.1;Name=OFO27929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687841.1;locus_tag=HMPREF3052_06835;product=protein convertase;protein_id=OFO27929.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 5539 5778 . + . ID=gene-HMPREF3052_06840;Name=HMPREF3052_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06840 GCA_001815685.1|KV821639.1 Protein Homology CDS 5539 5778 . + 0 ID=cds-OFO27930.1;Parent=gene-HMPREF3052_06840;Dbxref=NCBI_GP:OFO27930.1;Name=OFO27930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763931.1;locus_tag=HMPREF3052_06840;product=DNA-binding protein;protein_id=OFO27930.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 5795 6493 . + . ID=gene-HMPREF3052_06845;Name=HMPREF3052_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06845 GCA_001815685.1|KV821639.1 Protein Homology CDS 5795 6493 . + 0 ID=cds-OFO27931.1;Parent=gene-HMPREF3052_06845;Dbxref=NCBI_GP:OFO27931.1;Name=OFO27931.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687843.1;locus_tag=HMPREF3052_06845;product=hypothetical protein;protein_id=OFO27931.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 6560 7102 . + . ID=gene-HMPREF3052_06850;Name=HMPREF3052_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06850 GCA_001815685.1|KV821639.1 Protein Homology CDS 6560 7102 . + 0 ID=cds-OFO27932.1;Parent=gene-HMPREF3052_06850;Dbxref=NCBI_GP:OFO27932.1;Name=OFO27932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753010.1;locus_tag=HMPREF3052_06850;product=terminase;protein_id=OFO27932.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 7382 7690 . + . ID=gene-HMPREF3052_06855;Name=HMPREF3052_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06855 GCA_001815685.1|KV821639.1 Protein Homology CDS 7382 7690 . + 0 ID=cds-OFO27933.1;Parent=gene-HMPREF3052_06855;Dbxref=NCBI_GP:OFO27933.1;Name=OFO27933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687845.1;locus_tag=HMPREF3052_06855;product=hypothetical protein;protein_id=OFO27933.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 7910 8125 . + . ID=gene-HMPREF3052_06860;Name=HMPREF3052_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06860 GCA_001815685.1|KV821639.1 Protein Homology CDS 7910 8125 . + 0 ID=cds-OFO27934.1;Parent=gene-HMPREF3052_06860;Dbxref=NCBI_GP:OFO27934.1;Name=OFO27934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744176.1;locus_tag=HMPREF3052_06860;product=PTS sugar transporter subunit IID;protein_id=OFO27934.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 8122 8307 . + . ID=gene-HMPREF3052_06865;Name=HMPREF3052_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06865 GCA_001815685.1|KV821639.1 Protein Homology CDS 8122 8307 . + 0 ID=cds-OFO27935.1;Parent=gene-HMPREF3052_06865;Dbxref=NCBI_GP:OFO27935.1;Name=OFO27935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753015.1;locus_tag=HMPREF3052_06865;product=polyribonucleotide nucleotidyltransferase;protein_id=OFO27935.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 8304 9404 . + . ID=gene-HMPREF3052_06870;Name=HMPREF3052_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06870 GCA_001815685.1|KV821639.1 Protein Homology CDS 8304 9404 . + 0 ID=cds-OFO27936.1;Parent=gene-HMPREF3052_06870;Dbxref=NCBI_GP:OFO27936.1;Name=OFO27936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744179.1;locus_tag=HMPREF3052_06870;product=DNA primase;protein_id=OFO27936.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 9458 11146 . + . ID=gene-HMPREF3052_06875;Name=HMPREF3052_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06875 GCA_001815685.1|KV821639.1 Protein Homology CDS 9458 11146 . + 0 ID=cds-OFO27938.1;Parent=gene-HMPREF3052_06875;Dbxref=NCBI_GP:OFO27938.1;Name=OFO27938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784380.1;locus_tag=HMPREF3052_06875;product=helicase;protein_id=OFO27938.1;transl_table=11 GCA_001815685.1|KV821639.1 Genbank gene 11918 13258 . + . ID=gene-HMPREF3052_06880;Name=HMPREF3052_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06880 GCA_001815685.1|KV821639.1 Protein Homology CDS 11918 13258 . + 0 ID=cds-OFO27937.1;Parent=gene-HMPREF3052_06880;Dbxref=NCBI_GP:OFO27937.1;Name=OFO27937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520672.1;locus_tag=HMPREF3052_06880;product=hypothetical protein;protein_id=OFO27937.1;transl_table=11 ##sequence-region KV821640.1 1 5023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821640.1 Genbank region 1 5023 . + . ID=KV821640.1:1..5023;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821640.1 Genbank gene 1 682 . - . ID=gene-HMPREF3052_06885;Name=HMPREF3052_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06885;partial=true;start_range=.,1 GCA_001815685.1|KV821640.1 Protein Homology CDS 1 682 . - 0 ID=cds-OFO27889.1;Parent=gene-HMPREF3052_06885;Dbxref=NCBI_GP:OFO27889.1;Name=OFO27889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684181.1;locus_tag=HMPREF3052_06885;partial=true;product=hypothetical protein;protein_id=OFO27889.1;start_range=.,1;transl_table=11 GCA_001815685.1|KV821640.1 Genbank gene 721 1176 . - . ID=gene-HMPREF3052_06890;Name=HMPREF3052_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06890 GCA_001815685.1|KV821640.1 Protein Homology CDS 721 1176 . - 0 ID=cds-OFO27890.1;Parent=gene-HMPREF3052_06890;Dbxref=NCBI_GP:OFO27890.1;Name=OFO27890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526181.1;locus_tag=HMPREF3052_06890;product=hypothetical protein;protein_id=OFO27890.1;transl_table=11 GCA_001815685.1|KV821640.1 Genbank gene 1218 2240 . - . ID=gene-HMPREF3052_06895;Name=HMPREF3052_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06895 GCA_001815685.1|KV821640.1 Protein Homology CDS 1218 2240 . - 0 ID=cds-OFO27891.1;Parent=gene-HMPREF3052_06895;Dbxref=NCBI_GP:OFO27891.1;Name=OFO27891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745878.1;locus_tag=HMPREF3052_06895;product=hypothetical protein;protein_id=OFO27891.1;transl_table=11 GCA_001815685.1|KV821640.1 Genbank gene 2321 2782 . - . ID=gene-HMPREF3052_06900;Name=HMPREF3052_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06900 GCA_001815685.1|KV821640.1 GeneMarkS+ CDS 2321 2782 . - 0 ID=cds-OFO27892.1;Parent=gene-HMPREF3052_06900;Dbxref=NCBI_GP:OFO27892.1;Name=OFO27892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06900;product=hypothetical protein;protein_id=OFO27892.1;transl_table=11 GCA_001815685.1|KV821640.1 Genbank gene 3186 3485 . - . ID=gene-HMPREF3052_06905;Name=HMPREF3052_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06905 GCA_001815685.1|KV821640.1 Protein Homology CDS 3186 3485 . - 0 ID=cds-OFO27893.1;Parent=gene-HMPREF3052_06905;Dbxref=NCBI_GP:OFO27893.1;Name=OFO27893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749120.1;locus_tag=HMPREF3052_06905;product=hypothetical protein;protein_id=OFO27893.1;transl_table=11 GCA_001815685.1|KV821640.1 Genbank gene 3581 4411 . + . ID=gene-HMPREF3052_06910;Name=HMPREF3052_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06910 GCA_001815685.1|KV821640.1 Protein Homology CDS 3581 4411 . + 0 ID=cds-OFO27894.1;Parent=gene-HMPREF3052_06910;Dbxref=NCBI_GP:OFO27894.1;Name=OFO27894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684116.1;locus_tag=HMPREF3052_06910;product=acyltransferase;protein_id=OFO27894.1;transl_table=11 GCA_001815685.1|KV821640.1 Genbank gene 4421 4966 . + . ID=gene-HMPREF3052_06915;Name=HMPREF3052_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06915 GCA_001815685.1|KV821640.1 Protein Homology CDS 4421 4966 . + 0 ID=cds-OFO27895.1;Parent=gene-HMPREF3052_06915;Dbxref=NCBI_GP:OFO27895.1;Name=OFO27895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684216.1;locus_tag=HMPREF3052_06915;product=crossover junction endodeoxyribonuclease RuvC;protein_id=OFO27895.1;transl_table=11 ##sequence-region KV821641.1 1 355155 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821641.1 Genbank region 1 355155 . + . ID=KV821641.1:1..355155;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821641.1 Genbank pseudogene 272 1440 . + . ID=gene-HMPREF3052_06920;Name=HMPREF3052_06920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_06920;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 272 1440 . + 0 ID=cds-HMPREF3052_06920;Parent=gene-HMPREF3052_06920;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748551.1;locus_tag=HMPREF3052_06920;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 1636 1908 . + . ID=gene-HMPREF3052_06925;Name=HMPREF3052_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06925 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 1636 1908 . + 0 ID=cds-OFO27833.1;Parent=gene-HMPREF3052_06925;Dbxref=NCBI_GP:OFO27833.1;Name=OFO27833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06925;product=hypothetical protein;protein_id=OFO27833.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 1888 4584 . - . ID=gene-HMPREF3052_06930;Name=HMPREF3052_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06930 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 1888 4584 . - 0 ID=cds-OFO27834.1;Parent=gene-HMPREF3052_06930;Dbxref=NCBI_GP:OFO27834.1;Name=OFO27834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06930;product=hypothetical protein;protein_id=OFO27834.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 4633 4935 . + . ID=gene-HMPREF3052_06935;Name=HMPREF3052_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06935 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 4633 4935 . + 0 ID=cds-OFO27835.1;Parent=gene-HMPREF3052_06935;Dbxref=NCBI_GP:OFO27835.1;Name=OFO27835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06935;product=hypothetical protein;protein_id=OFO27835.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 4930 5082 . - . ID=gene-HMPREF3052_06940;Name=HMPREF3052_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06940 GCA_001815685.1|KV821641.1 Protein Homology CDS 4930 5082 . - 0 ID=cds-OFO27836.1;Parent=gene-HMPREF3052_06940;Dbxref=NCBI_GP:OFO27836.1;Name=OFO27836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658873.1;locus_tag=HMPREF3052_06940;product=phage tail protein;protein_id=OFO27836.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 5060 5362 . - . ID=gene-HMPREF3052_06945;Name=HMPREF3052_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06945 GCA_001815685.1|KV821641.1 Protein Homology CDS 5060 5362 . - 0 ID=cds-OFO27837.1;Parent=gene-HMPREF3052_06945;Dbxref=NCBI_GP:OFO27837.1;Name=OFO27837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282991.1;locus_tag=HMPREF3052_06945;product=hypothetical protein;protein_id=OFO27837.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 6013 6294 . + . ID=gene-HMPREF3052_06950;Name=HMPREF3052_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06950 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 6013 6294 . + 0 ID=cds-OFO27838.1;Parent=gene-HMPREF3052_06950;Dbxref=NCBI_GP:OFO27838.1;Name=OFO27838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06950;product=hypothetical protein;protein_id=OFO27838.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 6803 7054 . + . ID=gene-HMPREF3052_06955;Name=HMPREF3052_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06955 GCA_001815685.1|KV821641.1 Protein Homology CDS 6803 7054 . + 0 ID=cds-OFO27839.1;Parent=gene-HMPREF3052_06955;Dbxref=NCBI_GP:OFO27839.1;Name=OFO27839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283759.1;locus_tag=HMPREF3052_06955;product=hypothetical protein;protein_id=OFO27839.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 7180 7494 . + . ID=gene-HMPREF3052_06960;Name=HMPREF3052_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06960 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 7180 7494 . + 0 ID=cds-OFO27840.1;Parent=gene-HMPREF3052_06960;Dbxref=NCBI_GP:OFO27840.1;Name=OFO27840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06960;product=hypothetical protein;protein_id=OFO27840.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 7752 8069 . + . ID=gene-HMPREF3052_06965;Name=HMPREF3052_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06965 GCA_001815685.1|KV821641.1 Protein Homology CDS 7752 8069 . + 0 ID=cds-OFO27841.1;Parent=gene-HMPREF3052_06965;Dbxref=NCBI_GP:OFO27841.1;Name=OFO27841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283754.1;locus_tag=HMPREF3052_06965;product=hypothetical protein;protein_id=OFO27841.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 8158 8661 . + . ID=gene-HMPREF3052_06970;Name=HMPREF3052_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06970 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 8158 8661 . + 0 ID=cds-OFO27842.1;Parent=gene-HMPREF3052_06970;Dbxref=NCBI_GP:OFO27842.1;Name=OFO27842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06970;product=hypothetical protein;protein_id=OFO27842.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 8675 9346 . + . ID=gene-HMPREF3052_06975;Name=HMPREF3052_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06975 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 8675 9346 . + 0 ID=cds-OFO27843.1;Parent=gene-HMPREF3052_06975;Dbxref=NCBI_GP:OFO27843.1;Name=OFO27843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_06975;product=hypothetical protein;protein_id=OFO27843.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 9634 10812 . + . ID=gene-HMPREF3052_06980;Name=HMPREF3052_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06980 GCA_001815685.1|KV821641.1 Protein Homology CDS 9634 10812 . + 0 ID=cds-OFO27844.1;Parent=gene-HMPREF3052_06980;Dbxref=NCBI_GP:OFO27844.1;Name=OFO27844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283344.1;locus_tag=HMPREF3052_06980;product=phosphopantothenate synthase;protein_id=OFO27844.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 10870 11799 . - . ID=gene-HMPREF3052_06985;Name=HMPREF3052_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06985 GCA_001815685.1|KV821641.1 Protein Homology CDS 10870 11799 . - 0 ID=cds-OFO27845.1;Parent=gene-HMPREF3052_06985;Dbxref=NCBI_GP:OFO27845.1;Name=OFO27845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679342.1;locus_tag=HMPREF3052_06985;product=GTPase Era;protein_id=OFO27845.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 11865 12584 . - . ID=gene-HMPREF3052_06990;Name=HMPREF3052_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06990 GCA_001815685.1|KV821641.1 Protein Homology CDS 11865 12584 . - 0 ID=cds-OFO27846.1;Parent=gene-HMPREF3052_06990;Dbxref=NCBI_GP:OFO27846.1;Name=OFO27846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221273.1;locus_tag=HMPREF3052_06990;product=ribonuclease III;protein_id=OFO27846.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 12838 13161 . + . ID=gene-HMPREF3052_06995;Name=HMPREF3052_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_06995 GCA_001815685.1|KV821641.1 Protein Homology CDS 12838 13161 . + 0 ID=cds-OFO27849.1;Parent=gene-HMPREF3052_06995;Dbxref=NCBI_GP:OFO27849.1;Name=OFO27849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231998.1;locus_tag=HMPREF3052_06995;product=hypothetical protein;protein_id=OFO27849.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 13253 13732 . + . ID=gene-HMPREF3052_07000;Name=HMPREF3052_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07000 GCA_001815685.1|KV821641.1 Protein Homology CDS 13253 13732 . + 0 ID=cds-OFO27847.1;Parent=gene-HMPREF3052_07000;Dbxref=NCBI_GP:OFO27847.1;Name=OFO27847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748562.1;locus_tag=HMPREF3052_07000;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=OFO27847.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 13854 14282 . + . ID=gene-HMPREF3052_07005;Name=HMPREF3052_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07005 GCA_001815685.1|KV821641.1 Protein Homology CDS 13854 14282 . + 0 ID=cds-OFO27848.1;Parent=gene-HMPREF3052_07005;Dbxref=NCBI_GP:OFO27848.1;Name=OFO27848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679347.1;locus_tag=HMPREF3052_07005;product=N utilization substance protein B;protein_id=OFO27848.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 14528 14932 . - . ID=gene-HMPREF3052_07010;Name=HMPREF3052_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07010 GCA_001815685.1|KV821641.1 Protein Homology CDS 14528 14932 . - 0 ID=cds-OFO27768.1;Parent=gene-HMPREF3052_07010;Dbxref=NCBI_GP:OFO27768.1;Name=OFO27768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683020.1;locus_tag=HMPREF3052_07010;product=type IV pilin protein;protein_id=OFO27768.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 15221 16402 . + . ID=gene-HMPREF3052_07015;Name=HMPREF3052_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07015 GCA_001815685.1|KV821641.1 Protein Homology CDS 15221 16402 . + 0 ID=cds-OFO27769.1;Parent=gene-HMPREF3052_07015;Dbxref=NCBI_GP:OFO27769.1;Name=OFO27769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519696.1;locus_tag=HMPREF3052_07015;product=efflux transporter periplasmic adaptor subunit;protein_id=OFO27769.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 16484 18421 . + . ID=gene-HMPREF3052_07020;Name=HMPREF3052_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07020 GCA_001815685.1|KV821641.1 Protein Homology CDS 16484 18421 . + 0 ID=cds-OFO27770.1;Parent=gene-HMPREF3052_07020;Dbxref=NCBI_GP:OFO27770.1;Name=OFO27770.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683017.1;locus_tag=HMPREF3052_07020;product=MacB family efflux pump subunit;protein_id=OFO27770.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 18484 19866 . + . ID=gene-HMPREF3052_07025;Name=HMPREF3052_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07025 GCA_001815685.1|KV821641.1 Protein Homology CDS 18484 19866 . + 0 ID=cds-OFO27771.1;Parent=gene-HMPREF3052_07025;Dbxref=NCBI_GP:OFO27771.1;Name=OFO27771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425033.1;locus_tag=HMPREF3052_07025;product=transporter;protein_id=OFO27771.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 19978 20844 . + . ID=gene-HMPREF3052_07030;Name=HMPREF3052_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07030 GCA_001815685.1|KV821641.1 Protein Homology CDS 19978 20844 . + 0 ID=cds-OFO27772.1;Parent=gene-HMPREF3052_07030;Dbxref=NCBI_GP:OFO27772.1;Name=OFO27772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519693.1;locus_tag=HMPREF3052_07030;product=hypothetical protein;protein_id=OFO27772.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 20900 22447 . + . ID=gene-HMPREF3052_07035;Name=HMPREF3052_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07035 GCA_001815685.1|KV821641.1 Protein Homology CDS 20900 22447 . + 0 ID=cds-OFO27773.1;Parent=gene-HMPREF3052_07035;Dbxref=NCBI_GP:OFO27773.1;Name=OFO27773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748574.1;locus_tag=HMPREF3052_07035;product=apolipoprotein N-acyltransferase;protein_id=OFO27773.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 22728 23591 . + . ID=gene-HMPREF3052_07040;Name=HMPREF3052_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07040 GCA_001815685.1|KV821641.1 Protein Homology CDS 22728 23591 . + 0 ID=cds-OFO27774.1;Parent=gene-HMPREF3052_07040;Dbxref=NCBI_GP:OFO27774.1;Name=OFO27774.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581161.1;locus_tag=HMPREF3052_07040;product=RNA polymerase factor sigma-32;protein_id=OFO27774.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 23740 24993 . + . ID=gene-HMPREF3052_07045;Name=HMPREF3052_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07045 GCA_001815685.1|KV821641.1 Protein Homology CDS 23740 24993 . + 0 ID=cds-OFO27775.1;Parent=gene-HMPREF3052_07045;Dbxref=NCBI_GP:OFO27775.1;Name=OFO27775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679373.1;locus_tag=HMPREF3052_07045;product=glutamyl-tRNA reductase;protein_id=OFO27775.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 25239 26738 . + . ID=gene-HMPREF3052_07050;Name=HMPREF3052_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07050 GCA_001815685.1|KV821641.1 Protein Homology CDS 25239 26738 . + 0 ID=cds-OFO27776.1;Parent=gene-HMPREF3052_07050;Dbxref=NCBI_GP:OFO27776.1;Name=OFO27776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684314.1;locus_tag=HMPREF3052_07050;product=protease Do;protein_id=OFO27776.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 26872 28392 . + . ID=gene-HMPREF3052_07055;Name=HMPREF3052_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07055 GCA_001815685.1|KV821641.1 Protein Homology CDS 26872 28392 . + 0 ID=cds-OFO27777.1;Parent=gene-HMPREF3052_07055;Dbxref=NCBI_GP:OFO27777.1;Name=OFO27777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748583.1;locus_tag=HMPREF3052_07055;product=Na+/H+ antiporter;protein_id=OFO27777.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 28490 29575 . + . ID=gene-HMPREF3052_07060;Name=HMPREF3052_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07060 GCA_001815685.1|KV821641.1 Protein Homology CDS 28490 29575 . + 0 ID=cds-OFO27778.1;Parent=gene-HMPREF3052_07060;Dbxref=NCBI_GP:OFO27778.1;Name=OFO27778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282906.1;locus_tag=HMPREF3052_07060;product=beta-N-acetylhexosaminidase;protein_id=OFO27778.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 29653 30399 . - . ID=gene-HMPREF3052_07065;Name=HMPREF3052_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07065 GCA_001815685.1|KV821641.1 Protein Homology CDS 29653 30399 . - 0 ID=cds-OFO27779.1;Parent=gene-HMPREF3052_07065;Dbxref=NCBI_GP:OFO27779.1;Name=OFO27779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235972.1;locus_tag=HMPREF3052_07065;product=amino acid ABC transporter permease;protein_id=OFO27779.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 30727 32082 . + . ID=gene-HMPREF3052_07070;Name=HMPREF3052_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07070 GCA_001815685.1|KV821641.1 Protein Homology CDS 30727 32082 . + 0 ID=cds-OFO27780.1;Parent=gene-HMPREF3052_07070;Dbxref=NCBI_GP:OFO27780.1;Name=OFO27780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575501.1;locus_tag=HMPREF3052_07070;product=U32 family peptidase;protein_id=OFO27780.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 32146 33123 . - . ID=gene-HMPREF3052_07075;Name=HMPREF3052_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07075 GCA_001815685.1|KV821641.1 Protein Homology CDS 32146 33123 . - 0 ID=cds-OFO27781.1;Parent=gene-HMPREF3052_07075;Dbxref=NCBI_GP:OFO27781.1;Name=OFO27781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748591.1;locus_tag=HMPREF3052_07075;product=hydroxymethylbilane synthase;protein_id=OFO27781.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 33281 34618 . + . ID=gene-HMPREF3052_07080;Name=HMPREF3052_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07080 GCA_001815685.1|KV821641.1 Protein Homology CDS 33281 34618 . + 0 ID=cds-OFO27782.1;Parent=gene-HMPREF3052_07080;Dbxref=NCBI_GP:OFO27782.1;Name=OFO27782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684317.1;locus_tag=HMPREF3052_07080;product=adhesin;protein_id=OFO27782.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 34914 35429 . + . ID=gene-HMPREF3052_07085;Name=HMPREF3052_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07085 GCA_001815685.1|KV821641.1 Protein Homology CDS 34914 35429 . + 0 ID=cds-OFO27783.1;Parent=gene-HMPREF3052_07085;Dbxref=NCBI_GP:OFO27783.1;Name=OFO27783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KSE7.1;locus_tag=HMPREF3052_07085;product=rRNA maturation factor;protein_id=OFO27783.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 35431 36273 . + . ID=gene-HMPREF3052_07090;Name=HMPREF3052_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07090 GCA_001815685.1|KV821641.1 Protein Homology CDS 35431 36273 . + 0 ID=cds-OFO27784.1;Parent=gene-HMPREF3052_07090;Dbxref=NCBI_GP:OFO27784.1;Name=OFO27784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519680.1;locus_tag=HMPREF3052_07090;product=magnesium/cobalt efflux protein;protein_id=OFO27784.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 36270 37007 . + . ID=gene-HMPREF3052_07095;Name=HMPREF3052_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07095 GCA_001815685.1|KV821641.1 Protein Homology CDS 36270 37007 . + 0 ID=cds-OFO27785.1;Parent=gene-HMPREF3052_07095;Dbxref=NCBI_GP:OFO27785.1;Name=OFO27785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006227331.1;locus_tag=HMPREF3052_07095;product=ABC transporter ATP-binding protein;protein_id=OFO27785.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 37009 37695 . + . ID=gene-HMPREF3052_07100;Name=HMPREF3052_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07100 GCA_001815685.1|KV821641.1 Protein Homology CDS 37009 37695 . + 0 ID=cds-OFO27786.1;Parent=gene-HMPREF3052_07100;Dbxref=NCBI_GP:OFO27786.1;Name=OFO27786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219875.1;locus_tag=HMPREF3052_07100;product=methionine ABC transporter ATP-binding protein;protein_id=OFO27786.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 37897 38808 . + . ID=gene-HMPREF3052_07105;Name=HMPREF3052_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07105 GCA_001815685.1|KV821641.1 Protein Homology CDS 37897 38808 . + 0 ID=cds-OFO27787.1;Parent=gene-HMPREF3052_07105;Dbxref=NCBI_GP:OFO27787.1;Name=OFO27787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282775.1;locus_tag=HMPREF3052_07105;product=hypothetical protein;protein_id=OFO27787.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 39102 39407 . - . ID=gene-HMPREF3052_07110;Name=HMPREF3052_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07110 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 39102 39407 . - 0 ID=cds-OFO27788.1;Parent=gene-HMPREF3052_07110;Dbxref=NCBI_GP:OFO27788.1;Name=OFO27788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_07110;product=hypothetical protein;protein_id=OFO27788.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 39397 40422 . - . ID=gene-HMPREF3052_07115;Name=HMPREF3052_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07115 GCA_001815685.1|KV821641.1 Protein Homology CDS 39397 40422 . - 0 ID=cds-OFO27789.1;Parent=gene-HMPREF3052_07115;Dbxref=NCBI_GP:OFO27789.1;Name=OFO27789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272651.1;locus_tag=HMPREF3052_07115;product=NosX protein;protein_id=OFO27789.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 40540 41034 . - . ID=gene-HMPREF3052_07120;Name=HMPREF3052_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07120 GCA_001815685.1|KV821641.1 Protein Homology CDS 40540 41034 . - 0 ID=cds-OFO27790.1;Parent=gene-HMPREF3052_07120;Dbxref=NCBI_GP:OFO27790.1;Name=OFO27790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574176.1;locus_tag=HMPREF3052_07120;product=copper-binding protein;protein_id=OFO27790.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 41031 41861 . - . ID=gene-HMPREF3052_07125;Name=HMPREF3052_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07125 GCA_001815685.1|KV821641.1 Protein Homology CDS 41031 41861 . - 0 ID=cds-OFO27791.1;Parent=gene-HMPREF3052_07125;Dbxref=NCBI_GP:OFO27791.1;Name=OFO27791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688339.1;locus_tag=HMPREF3052_07125;product=hypothetical protein;protein_id=OFO27791.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 41858 42751 . - . ID=gene-HMPREF3052_07130;Name=HMPREF3052_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07130 GCA_001815685.1|KV821641.1 Protein Homology CDS 41858 42751 . - 0 ID=cds-OFO27792.1;Parent=gene-HMPREF3052_07130;Dbxref=NCBI_GP:OFO27792.1;Name=OFO27792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684436.1;locus_tag=HMPREF3052_07130;product=ABC transporter ATP-binding protein;protein_id=OFO27792.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 42811 44178 . - . ID=gene-HMPREF3052_07135;Name=HMPREF3052_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07135 GCA_001815685.1|KV821641.1 Protein Homology CDS 42811 44178 . - 0 ID=cds-OFO27793.1;Parent=gene-HMPREF3052_07135;Dbxref=NCBI_GP:OFO27793.1;Name=OFO27793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684342.1;locus_tag=HMPREF3052_07135;product=carbohydrate-binding protein;protein_id=OFO27793.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 44371 46338 . - . ID=gene-HMPREF3052_07140;Name=HMPREF3052_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07140 GCA_001815685.1|KV821641.1 Protein Homology CDS 44371 46338 . - 0 ID=cds-OFO27794.1;Parent=gene-HMPREF3052_07140;Dbxref=NCBI_GP:OFO27794.1;Name=OFO27794.1;Note=reduces nitrous oxide to nitrogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712466.1;locus_tag=HMPREF3052_07140;product=TAT-dependent nitrous-oxide reductase;protein_id=OFO27794.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 46445 48706 . - . ID=gene-HMPREF3052_07145;Name=HMPREF3052_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07145 GCA_001815685.1|KV821641.1 Protein Homology CDS 46445 48706 . - 0 ID=cds-OFO27803.1;Parent=gene-HMPREF3052_07145;Dbxref=NCBI_GP:OFO27803.1;Name=OFO27803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449380.1;locus_tag=HMPREF3052_07145;product=4Fe-4S binding protein;protein_id=OFO27803.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 49209 50282 . - . ID=gene-HMPREF3052_07150;Name=HMPREF3052_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07150 GCA_001815685.1|KV821641.1 Protein Homology CDS 49209 50282 . - 0 ID=cds-OFO27795.1;Parent=gene-HMPREF3052_07150;Dbxref=NCBI_GP:OFO27795.1;Name=OFO27795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P30692.1;locus_tag=HMPREF3052_07150;product=hypothetical protein;protein_id=OFO27795.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 50596 51441 . - . ID=gene-HMPREF3052_07155;Name=HMPREF3052_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07155 GCA_001815685.1|KV821641.1 Protein Homology CDS 50596 51441 . - 0 ID=cds-OFO27796.1;Parent=gene-HMPREF3052_07155;Dbxref=NCBI_GP:OFO27796.1;Name=OFO27796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679414.1;locus_tag=HMPREF3052_07155;product=tRNA pseudouridine(38-40) synthase;protein_id=OFO27796.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 51667 53652 . - . ID=gene-HMPREF3052_07160;Name=HMPREF3052_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07160 GCA_001815685.1|KV821641.1 Protein Homology CDS 51667 53652 . - 0 ID=cds-OFO27797.1;Parent=gene-HMPREF3052_07160;Dbxref=NCBI_GP:OFO27797.1;Name=OFO27797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679415.1;locus_tag=HMPREF3052_07160;product=TspA protein;protein_id=OFO27797.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 54006 54539 . + . ID=gene-HMPREF3052_07165;Name=HMPREF3052_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07165 GCA_001815685.1|KV821641.1 Protein Homology CDS 54006 54539 . + 0 ID=cds-OFO27798.1;Parent=gene-HMPREF3052_07165;Dbxref=NCBI_GP:OFO27798.1;Name=OFO27798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679419.1;locus_tag=HMPREF3052_07165;product=septation protein A;protein_id=OFO27798.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 54539 54829 . + . ID=gene-HMPREF3052_07170;Name=HMPREF3052_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07170 GCA_001815685.1|KV821641.1 Protein Homology CDS 54539 54829 . + 0 ID=cds-OFO27799.1;Parent=gene-HMPREF3052_07170;Dbxref=NCBI_GP:OFO27799.1;Name=OFO27799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679421.1;locus_tag=HMPREF3052_07170;product=hypothetical protein;protein_id=OFO27799.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 54826 55098 . + . ID=gene-HMPREF3052_07175;Name=HMPREF3052_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07175 GCA_001815685.1|KV821641.1 Protein Homology CDS 54826 55098 . + 0 ID=cds-OFO27800.1;Parent=gene-HMPREF3052_07175;Dbxref=NCBI_GP:OFO27800.1;Name=OFO27800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684424.1;locus_tag=HMPREF3052_07175;product=BolA family transcriptional regulator;protein_id=OFO27800.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 55168 56040 . + . ID=gene-HMPREF3052_07180;Name=HMPREF3052_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07180 GCA_001815685.1|KV821641.1 Protein Homology CDS 55168 56040 . + 0 ID=cds-OFO27801.1;Parent=gene-HMPREF3052_07180;Dbxref=NCBI_GP:OFO27801.1;Name=OFO27801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748631.1;locus_tag=HMPREF3052_07180;product=hypothetical protein;protein_id=OFO27801.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 56085 56849 . + . ID=gene-HMPREF3052_07185;Name=HMPREF3052_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07185 GCA_001815685.1|KV821641.1 Protein Homology CDS 56085 56849 . + 0 ID=cds-OFO27802.1;Parent=gene-HMPREF3052_07185;Dbxref=NCBI_GP:OFO27802.1;Name=OFO27802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519661.1;locus_tag=HMPREF3052_07185;product=peptidylprolyl isomerase;protein_id=OFO27802.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 56946 57407 . + . ID=gene-HMPREF3052_07190;Name=HMPREF3052_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07190 GCA_001815685.1|KV821641.1 Protein Homology CDS 56946 57407 . + 0 ID=cds-OFO27804.1;Parent=gene-HMPREF3052_07190;Dbxref=NCBI_GP:OFO27804.1;Name=OFO27804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676555.1;locus_tag=HMPREF3052_07190;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=OFO27804.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 57593 57934 . - . ID=gene-HMPREF3052_07195;Name=HMPREF3052_07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_07195;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 57593 57934 . - 0 ID=cds-HMPREF3052_07195;Parent=gene-HMPREF3052_07195;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312795.1;locus_tag=HMPREF3052_07195;product=gluconokinase;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 58132 58908 . - . ID=gene-HMPREF3052_07200;Name=HMPREF3052_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07200 GCA_001815685.1|KV821641.1 Protein Homology CDS 58132 58908 . - 0 ID=cds-OFO27506.1;Parent=gene-HMPREF3052_07200;Dbxref=NCBI_GP:OFO27506.1;Name=OFO27506.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679436.1;locus_tag=HMPREF3052_07200;product=twin-arginine protein translocation system subunit TatC;protein_id=OFO27506.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 58924 59586 . - . ID=gene-HMPREF3052_07205;Name=HMPREF3052_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07205 GCA_001815685.1|KV821641.1 Protein Homology CDS 58924 59586 . - 0 ID=cds-OFO27507.1;Parent=gene-HMPREF3052_07205;Dbxref=NCBI_GP:OFO27507.1;Name=OFO27507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748645.1;locus_tag=HMPREF3052_07205;product=twin arginine-targeting protein translocase TatB;protein_id=OFO27507.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 59590 59793 . - . ID=gene-HMPREF3052_07210;Name=HMPREF3052_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07210 GCA_001815685.1|KV821641.1 Protein Homology CDS 59590 59793 . - 0 ID=cds-OFO27508.1;Parent=gene-HMPREF3052_07210;Dbxref=NCBI_GP:OFO27508.1;Name=OFO27508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219659.1;locus_tag=HMPREF3052_07210;product=preprotein translocase subunit TatA;protein_id=OFO27508.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 59829 60152 . - . ID=gene-HMPREF3052_07215;Name=HMPREF3052_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07215 GCA_001815685.1|KV821641.1 Protein Homology CDS 59829 60152 . - 0 ID=cds-OFO27509.1;Parent=gene-HMPREF3052_07215;Dbxref=NCBI_GP:OFO27509.1;Name=OFO27509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449364.1;locus_tag=HMPREF3052_07215;product=histidine triad nucleotide-binding protein;protein_id=OFO27509.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 60271 60594 . - . ID=gene-HMPREF3052_07220;Name=HMPREF3052_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07220 GCA_001815685.1|KV821641.1 Protein Homology CDS 60271 60594 . - 0 ID=cds-OFO27510.1;Parent=gene-HMPREF3052_07220;Dbxref=NCBI_GP:OFO27510.1;Name=OFO27510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313162.1;locus_tag=HMPREF3052_07220;product=phosphoribosyl-ATP pyrophosphatase;protein_id=OFO27510.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 60627 61034 . - . ID=gene-HMPREF3052_07225;Name=HMPREF3052_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07225 GCA_001815685.1|KV821641.1 Protein Homology CDS 60627 61034 . - 0 ID=cds-OFO27511.1;Parent=gene-HMPREF3052_07225;Dbxref=NCBI_GP:OFO27511.1;Name=OFO27511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679441.1;locus_tag=HMPREF3052_07225;product=phosphoribosyl-AMP cyclohydrolase;protein_id=OFO27511.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 61079 61846 . - . ID=gene-HMPREF3052_07230;Name=HMPREF3052_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07230 GCA_001815685.1|KV821641.1 Protein Homology CDS 61079 61846 . - 0 ID=cds-OFO27512.1;Parent=gene-HMPREF3052_07230;Dbxref=NCBI_GP:OFO27512.1;Name=OFO27512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251159.1;locus_tag=HMPREF3052_07230;product=imidazole glycerol phosphate synthase cyclase subunit;protein_id=OFO27512.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 61887 62204 . - . ID=gene-HMPREF3052_07235;Name=HMPREF3052_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07235 GCA_001815685.1|KV821641.1 Protein Homology CDS 61887 62204 . - 0 ID=cds-OFO27513.1;Parent=gene-HMPREF3052_07235;Dbxref=NCBI_GP:OFO27513.1;Name=OFO27513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519651.1;locus_tag=HMPREF3052_07235;product=multidrug transporter MatE;protein_id=OFO27513.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 62382 63119 . - . ID=gene-HMPREF3052_07240;Name=HMPREF3052_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07240 GCA_001815685.1|KV821641.1 Protein Homology CDS 62382 63119 . - 0 ID=cds-OFO27514.1;Parent=gene-HMPREF3052_07240;Dbxref=NCBI_GP:OFO27514.1;Name=OFO27514.1;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313164.1;locus_tag=HMPREF3052_07240;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=OFO27514.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 63194 63838 . - . ID=gene-HMPREF3052_07245;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=HMPREF3052_07245 GCA_001815685.1|KV821641.1 Protein Homology CDS 63194 63838 . - 0 ID=cds-OFO27515.1;Parent=gene-HMPREF3052_07245;Dbxref=NCBI_GP:OFO27515.1;Name=OFO27515.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748657.1;locus_tag=HMPREF3052_07245;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=OFO27515.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 64008 64964 . - . ID=gene-HMPREF3052_07250;Name=HMPREF3052_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07250 GCA_001815685.1|KV821641.1 Protein Homology CDS 64008 64964 . - 0 ID=cds-OFO27516.1;Parent=gene-HMPREF3052_07250;Dbxref=NCBI_GP:OFO27516.1;Name=OFO27516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748659.1;locus_tag=HMPREF3052_07250;product=imidazoleglycerol-phosphate dehydratase;protein_id=OFO27516.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 64984 66069 . - . ID=gene-HMPREF3052_07255;Name=HMPREF3052_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07255 GCA_001815685.1|KV821641.1 Protein Homology CDS 64984 66069 . - 0 ID=cds-OFO27517.1;Parent=gene-HMPREF3052_07255;Dbxref=NCBI_GP:OFO27517.1;Name=OFO27517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519646.1;locus_tag=HMPREF3052_07255;product=histidinol-phosphate aminotransferase;protein_id=OFO27517.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 66290 66646 . + . ID=gene-HMPREF3052_07260;Name=HMPREF3052_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07260 GCA_001815685.1|KV821641.1 Protein Homology CDS 66290 66646 . + 0 ID=cds-OFO27518.1;Parent=gene-HMPREF3052_07260;Dbxref=NCBI_GP:OFO27518.1;Name=OFO27518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748664.1;locus_tag=HMPREF3052_07260;product=hypothetical protein;protein_id=OFO27518.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 66643 68475 . + . ID=gene-HMPREF3052_07265;Name=HMPREF3052_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07265 GCA_001815685.1|KV821641.1 Protein Homology CDS 66643 68475 . + 0 ID=cds-OFO27519.1;Parent=gene-HMPREF3052_07265;Dbxref=NCBI_GP:OFO27519.1;Name=OFO27519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519644.1;locus_tag=HMPREF3052_07265;product=polymerase;protein_id=OFO27519.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 68683 69360 . + . ID=gene-HMPREF3052_07270;Name=HMPREF3052_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07270 GCA_001815685.1|KV821641.1 Protein Homology CDS 68683 69360 . + 0 ID=cds-OFO27520.1;Parent=gene-HMPREF3052_07270;Dbxref=NCBI_GP:OFO27520.1;Name=OFO27520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684348.1;locus_tag=HMPREF3052_07270;product=DNA-binding response regulator;protein_id=OFO27520.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 69375 70772 . + . ID=gene-HMPREF3052_07275;Name=HMPREF3052_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07275 GCA_001815685.1|KV821641.1 Protein Homology CDS 69375 70772 . + 0 ID=cds-OFO27521.1;Parent=gene-HMPREF3052_07275;Dbxref=NCBI_GP:OFO27521.1;Name=OFO27521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684430.1;locus_tag=HMPREF3052_07275;product=two-component sensor histidine kinase;protein_id=OFO27521.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 70828 73218 . + . ID=gene-HMPREF3052_07280;Name=HMPREF3052_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07280 GCA_001815685.1|KV821641.1 Protein Homology CDS 70828 73218 . + 0 ID=cds-OFO27522.1;Parent=gene-HMPREF3052_07280;Dbxref=NCBI_GP:OFO27522.1;Name=OFO27522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684357.1;locus_tag=HMPREF3052_07280;product=CoA-binding protein;protein_id=OFO27522.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 73294 73542 . + . ID=gene-HMPREF3052_07285;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF3052_07285 GCA_001815685.1|KV821641.1 Protein Homology CDS 73294 73542 . + 0 ID=cds-OFO27523.1;Parent=gene-HMPREF3052_07285;Dbxref=NCBI_GP:OFO27523.1;Name=OFO27523.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783187.1;locus_tag=HMPREF3052_07285;product=30S ribosomal protein S16;protein_id=OFO27523.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 73558 74067 . + . ID=gene-HMPREF3052_07290;Name=HMPREF3052_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07290 GCA_001815685.1|KV821641.1 Protein Homology CDS 73558 74067 . + 0 ID=cds-OFO27524.1;Parent=gene-HMPREF3052_07290;Dbxref=NCBI_GP:OFO27524.1;Name=OFO27524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748672.1;locus_tag=HMPREF3052_07290;product=ribosome maturation factor RimM;protein_id=OFO27524.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 74067 74816 . + . ID=gene-HMPREF3052_07295;Name=HMPREF3052_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07295 GCA_001815685.1|KV821641.1 Protein Homology CDS 74067 74816 . + 0 ID=cds-OFO27525.1;Parent=gene-HMPREF3052_07295;Dbxref=NCBI_GP:OFO27525.1;Name=OFO27525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K0K4.1;locus_tag=HMPREF3052_07295;product=tRNA (guanine(37)-N(1))-methyltransferase;protein_id=OFO27525.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 74831 75196 . + . ID=gene-HMPREF3052_07300;Name=HMPREF3052_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07300 GCA_001815685.1|KV821641.1 Protein Homology CDS 74831 75196 . + 0 ID=cds-OFO27526.1;Parent=gene-HMPREF3052_07300;Dbxref=NCBI_GP:OFO27526.1;Name=OFO27526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679470.1;locus_tag=HMPREF3052_07300;product=50S ribosomal protein L19;protein_id=OFO27526.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 75408 76817 . - . ID=gene-HMPREF3052_07305;Name=HMPREF3052_07305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_07305;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 75408 76817 . - 0 ID=cds-HMPREF3052_07305;Parent=gene-HMPREF3052_07305;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693752.1;locus_tag=HMPREF3052_07305;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 77162 77638 . + . ID=gene-HMPREF3052_07310;Name=HMPREF3052_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07310 GCA_001815685.1|KV821641.1 Protein Homology CDS 77162 77638 . + 0 ID=cds-OFO27527.1;Parent=gene-HMPREF3052_07310;Dbxref=NCBI_GP:OFO27527.1;Name=OFO27527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686342.1;locus_tag=HMPREF3052_07310;product=transcription elongation factor GreA;protein_id=OFO27527.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 77737 78165 . + . ID=gene-HMPREF3052_07315;Name=HMPREF3052_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07315 GCA_001815685.1|KV821641.1 Protein Homology CDS 77737 78165 . + 0 ID=cds-OFO27528.1;Parent=gene-HMPREF3052_07315;Dbxref=NCBI_GP:OFO27528.1;Name=OFO27528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748681.1;locus_tag=HMPREF3052_07315;product=hypothetical protein;protein_id=OFO27528.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 78301 79062 . - . ID=gene-HMPREF3052_07320;Name=HMPREF3052_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07320 GCA_001815685.1|KV821641.1 Protein Homology CDS 78301 79062 . - 0 ID=cds-OFO27529.1;Parent=gene-HMPREF3052_07320;Dbxref=NCBI_GP:OFO27529.1;Name=OFO27529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519633.1;locus_tag=HMPREF3052_07320;product=hypothetical protein;protein_id=OFO27529.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 79505 80455 . + . ID=gene-HMPREF3052_07325;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=HMPREF3052_07325 GCA_001815685.1|KV821641.1 Protein Homology CDS 79505 80455 . + 0 ID=cds-OFO27530.1;Parent=gene-HMPREF3052_07325;Dbxref=NCBI_GP:OFO27530.1;Name=OFO27530.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230250.1;locus_tag=HMPREF3052_07325;product=transcriptional regulator CysB;protein_id=OFO27530.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 80542 81276 . - . ID=gene-HMPREF3052_07330;Name=HMPREF3052_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07330 GCA_001815685.1|KV821641.1 Protein Homology CDS 80542 81276 . - 0 ID=cds-OFO27531.1;Parent=gene-HMPREF3052_07330;Dbxref=NCBI_GP:OFO27531.1;Name=OFO27531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448471.1;locus_tag=HMPREF3052_07330;product=transcriptional regulator;protein_id=OFO27531.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 81438 82859 . + . ID=gene-HMPREF3052_07335;Name=HMPREF3052_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07335 GCA_001815685.1|KV821641.1 Protein Homology CDS 81438 82859 . + 0 ID=cds-OFO27532.1;Parent=gene-HMPREF3052_07335;Dbxref=NCBI_GP:OFO27532.1;Name=OFO27532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773836.1;locus_tag=HMPREF3052_07335;product=coproporphyrinogen III oxidase;protein_id=OFO27532.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 82991 83323 . + . ID=gene-HMPREF3052_07340;Name=HMPREF3052_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07340 GCA_001815685.1|KV821641.1 Protein Homology CDS 82991 83323 . + 0 ID=cds-OFO27533.1;Parent=gene-HMPREF3052_07340;Dbxref=NCBI_GP:OFO27533.1;Name=OFO27533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761972.1;locus_tag=HMPREF3052_07340;product=hypothetical protein;protein_id=OFO27533.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 83690 83935 . + . ID=gene-HMPREF3052_07345;Name=HMPREF3052_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07345 GCA_001815685.1|KV821641.1 Protein Homology CDS 83690 83935 . + 0 ID=cds-OFO27534.1;Parent=gene-HMPREF3052_07345;Dbxref=NCBI_GP:OFO27534.1;Name=OFO27534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519627.1;locus_tag=HMPREF3052_07345;product=oxidoreductase;protein_id=OFO27534.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 83974 84960 . + . ID=gene-HMPREF3052_07350;Name=HMPREF3052_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07350 GCA_001815685.1|KV821641.1 Protein Homology CDS 83974 84960 . + 0 ID=cds-OFO27535.1;Parent=gene-HMPREF3052_07350;Dbxref=NCBI_GP:OFO27535.1;Name=OFO27535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679304.1;locus_tag=HMPREF3052_07350;product=polysaccharide biosynthesis protein GumN;protein_id=OFO27535.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 85060 86055 . - . ID=gene-HMPREF3052_07355;Name=HMPREF3052_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07355 GCA_001815685.1|KV821641.1 Protein Homology CDS 85060 86055 . - 0 ID=cds-OFO27536.1;Parent=gene-HMPREF3052_07355;Dbxref=NCBI_GP:OFO27536.1;Name=OFO27536.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P21302.1;locus_tag=HMPREF3052_07355;product=ornithine carbamoyltransferase;protein_id=OFO27536.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 86199 86954 . - . ID=gene-HMPREF3052_07360;Name=HMPREF3052_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07360 GCA_001815685.1|KV821641.1 Protein Homology CDS 86199 86954 . - 0 ID=cds-OFO27537.1;Parent=gene-HMPREF3052_07360;Dbxref=NCBI_GP:OFO27537.1;Name=OFO27537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748702.1;locus_tag=HMPREF3052_07360;product=cysteine methyltransferase;protein_id=OFO27537.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 87124 87609 . - . ID=gene-HMPREF3052_07365;Name=HMPREF3052_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07365 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 87124 87609 . - 0 ID=cds-OFO27538.1;Parent=gene-HMPREF3052_07365;Dbxref=NCBI_GP:OFO27538.1;Name=OFO27538.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_07365;product=hypothetical protein;protein_id=OFO27538.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 87718 88851 . - . ID=gene-HMPREF3052_07370;Name=HMPREF3052_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07370 GCA_001815685.1|KV821641.1 Protein Homology CDS 87718 88851 . - 0 ID=cds-OFO27539.1;Parent=gene-HMPREF3052_07370;Dbxref=NCBI_GP:OFO27539.1;Name=OFO27539.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684298.1;locus_tag=HMPREF3052_07370;product=succinyl-diaminopimelate desuccinylase;protein_id=OFO27539.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 88956 89576 . - . ID=gene-HMPREF3052_07375;Name=HMPREF3052_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07375 GCA_001815685.1|KV821641.1 Protein Homology CDS 88956 89576 . - 0 ID=cds-OFO27540.1;Parent=gene-HMPREF3052_07375;Dbxref=NCBI_GP:OFO27540.1;Name=OFO27540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219013.1;locus_tag=HMPREF3052_07375;product=diadenosine tetraphosphatase;protein_id=OFO27540.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 89611 90120 . - . ID=gene-HMPREF3052_07380;Name=HMPREF3052_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07380 GCA_001815685.1|KV821641.1 Protein Homology CDS 89611 90120 . - 0 ID=cds-OFO27541.1;Parent=gene-HMPREF3052_07380;Dbxref=NCBI_GP:OFO27541.1;Name=OFO27541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258286.1;locus_tag=HMPREF3052_07380;product=cation-binding protein;protein_id=OFO27541.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 90206 90784 . - . ID=gene-HMPREF3052_07385;Name=HMPREF3052_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07385 GCA_001815685.1|KV821641.1 Protein Homology CDS 90206 90784 . - 0 ID=cds-OFO27542.1;Parent=gene-HMPREF3052_07385;Dbxref=NCBI_GP:OFO27542.1;Name=OFO27542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684449.1;locus_tag=HMPREF3052_07385;product=azurin;protein_id=OFO27542.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 91076 91498 . - . ID=gene-HMPREF3052_07390;Name=HMPREF3052_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07390 GCA_001815685.1|KV821641.1 Protein Homology CDS 91076 91498 . - 0 ID=cds-OFO27543.1;Parent=gene-HMPREF3052_07390;Dbxref=NCBI_GP:OFO27543.1;Name=OFO27543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776918.1;locus_tag=HMPREF3052_07390;product=hypothetical protein;protein_id=OFO27543.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 91652 94405 . + . ID=gene-HMPREF3052_07395;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF3052_07395 GCA_001815685.1|KV821641.1 Protein Homology CDS 91652 94405 . + 0 ID=cds-OFO27544.1;Parent=gene-HMPREF3052_07395;Dbxref=NCBI_GP:OFO27544.1;Name=OFO27544.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679319.1;locus_tag=HMPREF3052_07395;product=preprotein translocase subunit SecA;protein_id=OFO27544.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 94538 95638 . + . ID=gene-HMPREF3052_07400;Name=HMPREF3052_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07400 GCA_001815685.1|KV821641.1 Protein Homology CDS 94538 95638 . + 0 ID=cds-OFO27545.1;Parent=gene-HMPREF3052_07400;Dbxref=NCBI_GP:OFO27545.1;Name=OFO27545.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748720.1;locus_tag=HMPREF3052_07400;product=chorismate synthase;protein_id=OFO27545.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 95756 96193 . + . ID=gene-HMPREF3052_07405;Name=HMPREF3052_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07405 GCA_001815685.1|KV821641.1 Protein Homology CDS 95756 96193 . + 0 ID=cds-OFO27546.1;Parent=gene-HMPREF3052_07405;Dbxref=NCBI_GP:OFO27546.1;Name=OFO27546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238237.1;locus_tag=HMPREF3052_07405;product=osmoprotectant transport activator ProQ;protein_id=OFO27546.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 96541 98115 . - . ID=gene-HMPREF3052_07410;Name=HMPREF3052_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07410 GCA_001815685.1|KV821641.1 Protein Homology CDS 96541 98115 . - 0 ID=cds-OFO27547.1;Parent=gene-HMPREF3052_07410;Dbxref=NCBI_GP:OFO27547.1;Name=OFO27547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748724.1;locus_tag=HMPREF3052_07410;product=phosphate permease;protein_id=OFO27547.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 98269 99372 . + . ID=gene-HMPREF3052_07415;Name=HMPREF3052_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07415 GCA_001815685.1|KV821641.1 Protein Homology CDS 98269 99372 . + 0 ID=cds-OFO27548.1;Parent=gene-HMPREF3052_07415;Dbxref=NCBI_GP:OFO27548.1;Name=OFO27548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519614.1;locus_tag=HMPREF3052_07415;product=anhydro-N-acetylmuramic acid kinase;protein_id=OFO27548.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 99436 100995 . - . ID=gene-HMPREF3052_07420;Name=HMPREF3052_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07420 GCA_001815685.1|KV821641.1 Protein Homology CDS 99436 100995 . - 0 ID=cds-OFO27549.1;Parent=gene-HMPREF3052_07420;Dbxref=NCBI_GP:OFO27549.1;Name=OFO27549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684289.1;locus_tag=HMPREF3052_07420;product=hypothetical protein;protein_id=OFO27549.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 101256 102047 . - . ID=gene-HMPREF3052_07425;Name=HMPREF3052_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07425 GCA_001815685.1|KV821641.1 Protein Homology CDS 101256 102047 . - 0 ID=cds-OFO27550.1;Parent=gene-HMPREF3052_07425;Dbxref=NCBI_GP:OFO27550.1;Name=OFO27550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776244.1;locus_tag=HMPREF3052_07425;product=fimb protein;protein_id=OFO27550.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 102245 102320 . - . ID=gene-HMPREF3052_07430;Name=HMPREF3052_07430;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_07430 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 102245 102320 . - . ID=rna-HMPREF3052_07430;Parent=gene-HMPREF3052_07430;anticodon=(pos:complement(102285..102287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07430;product=tRNA-Asn GCA_001815685.1|KV821641.1 tRNAscan-SE exon 102245 102320 . - . ID=exon-HMPREF3052_07430-1;Parent=rna-HMPREF3052_07430;anticodon=(pos:complement(102285..102287));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07430;product=tRNA-Asn GCA_001815685.1|KV821641.1 Genbank gene 102371 103063 . - . ID=gene-HMPREF3052_07435;Name=HMPREF3052_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07435 GCA_001815685.1|KV821641.1 Protein Homology CDS 102371 103063 . - 0 ID=cds-OFO27551.1;Parent=gene-HMPREF3052_07435;Dbxref=NCBI_GP:OFO27551.1;Name=OFO27551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684347.1;locus_tag=HMPREF3052_07435;product=transposase;protein_id=OFO27551.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 103147 103506 . - . ID=gene-HMPREF3052_07440;Name=HMPREF3052_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07440 GCA_001815685.1|KV821641.1 Protein Homology CDS 103147 103506 . - 0 ID=cds-OFO27552.1;Parent=gene-HMPREF3052_07440;Dbxref=NCBI_GP:OFO27552.1;Name=OFO27552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684442.1;locus_tag=HMPREF3052_07440;product=hypothetical protein;protein_id=OFO27552.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 103546 104187 . - . ID=gene-HMPREF3052_07445;Name=HMPREF3052_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07445 GCA_001815685.1|KV821641.1 Protein Homology CDS 103546 104187 . - 0 ID=cds-OFO27553.1;Parent=gene-HMPREF3052_07445;Dbxref=NCBI_GP:OFO27553.1;Name=OFO27553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232884.1;locus_tag=HMPREF3052_07445;product=peptidase M23;protein_id=OFO27553.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 104189 104725 . - . ID=gene-HMPREF3052_07450;Name=HMPREF3052_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07450 GCA_001815685.1|KV821641.1 Protein Homology CDS 104189 104725 . - 0 ID=cds-OFO27554.1;Parent=gene-HMPREF3052_07450;Dbxref=NCBI_GP:OFO27554.1;Name=OFO27554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684400.1;locus_tag=HMPREF3052_07450;product=GTP-binding protein;protein_id=OFO27554.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 104736 105839 . - . ID=gene-HMPREF3052_07455;Name=HMPREF3052_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07455 GCA_001815685.1|KV821641.1 Protein Homology CDS 104736 105839 . - 0 ID=cds-OFO27555.1;Parent=gene-HMPREF3052_07455;Dbxref=NCBI_GP:OFO27555.1;Name=OFO27555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519610.1;locus_tag=HMPREF3052_07455;product=alpha-glucan phosphorylase;protein_id=OFO27555.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 105863 107338 . - . ID=gene-HMPREF3052_07460;Name=HMPREF3052_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07460 GCA_001815685.1|KV821641.1 Protein Homology CDS 105863 107338 . - 0 ID=cds-OFO27556.1;Parent=gene-HMPREF3052_07460;Dbxref=NCBI_GP:OFO27556.1;Name=OFO27556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684409.1;locus_tag=HMPREF3052_07460;product=23S rRNA methyltransferase;protein_id=OFO27556.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 107463 108788 . - . ID=gene-HMPREF3052_07465;Name=HMPREF3052_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07465 GCA_001815685.1|KV821641.1 Protein Homology CDS 107463 108788 . - 0 ID=cds-OFO27557.1;Parent=gene-HMPREF3052_07465;Dbxref=NCBI_GP:OFO27557.1;Name=OFO27557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684362.1;locus_tag=HMPREF3052_07465;product=23S rRNA (uracil(1939)-C(5))-methyltransferase;protein_id=OFO27557.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 108928 109989 . + . ID=gene-HMPREF3052_07470;Name=HMPREF3052_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07470 GCA_001815685.1|KV821641.1 Protein Homology CDS 108928 109989 . + 0 ID=cds-OFO27558.1;Parent=gene-HMPREF3052_07470;Dbxref=NCBI_GP:OFO27558.1;Name=OFO27558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282610.1;locus_tag=HMPREF3052_07470;product=L%2CD-transpeptidase catalytic domain protein;protein_id=OFO27558.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 110084 110743 . - . ID=gene-HMPREF3052_07475;Name=HMPREF3052_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07475 GCA_001815685.1|KV821641.1 Protein Homology CDS 110084 110743 . - 0 ID=cds-OFO27559.1;Parent=gene-HMPREF3052_07475;Dbxref=NCBI_GP:OFO27559.1;Name=OFO27559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815312.1;locus_tag=HMPREF3052_07475;product=7-cyano-7-deazaguanine synthase;protein_id=OFO27559.1;transl_table=11 GCA_001815685.1|KV821641.1 cmsearch binding_site 110747 110792 . - . ID=id-KV821641.1:110747..110792;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001815685.1|KV821641.1 Genbank gene 110864 111463 . + . ID=gene-HMPREF3052_07480;Name=HMPREF3052_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07480 GCA_001815685.1|KV821641.1 Protein Homology CDS 110864 111463 . + 0 ID=cds-OFO27560.1;Parent=gene-HMPREF3052_07480;Dbxref=NCBI_GP:OFO27560.1;Name=OFO27560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174814.1;locus_tag=HMPREF3052_07480;product=CDP-alcohol phosphatidyltransferase;protein_id=OFO27560.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 111604 113466 . - . ID=gene-HMPREF3052_07485;Name=HMPREF3052_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07485 GCA_001815685.1|KV821641.1 Protein Homology CDS 111604 113466 . - 0 ID=cds-OFO27561.1;Parent=gene-HMPREF3052_07485;Dbxref=NCBI_GP:OFO27561.1;Name=OFO27561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763023.1;locus_tag=HMPREF3052_07485;product=hypothetical protein;protein_id=OFO27561.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 113632 113916 . - . ID=gene-HMPREF3052_07490;Name=HMPREF3052_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07490 GCA_001815685.1|KV821641.1 Protein Homology CDS 113632 113916 . - 0 ID=cds-OFO27562.1;Parent=gene-HMPREF3052_07490;Dbxref=NCBI_GP:OFO27562.1;Name=OFO27562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684382.1;locus_tag=HMPREF3052_07490;product=peptidase propeptide and YPEB domain protein;protein_id=OFO27562.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 114148 114948 . + . ID=gene-HMPREF3052_07495;Name=HMPREF3052_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07495 GCA_001815685.1|KV821641.1 Protein Homology CDS 114148 114948 . + 0 ID=cds-OFO27563.1;Parent=gene-HMPREF3052_07495;Dbxref=NCBI_GP:OFO27563.1;Name=OFO27563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684446.1;locus_tag=HMPREF3052_07495;product=protein phosphatase;protein_id=OFO27563.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 115047 116789 . + . ID=gene-HMPREF3052_07500;Name=HMPREF3052_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07500 GCA_001815685.1|KV821641.1 Protein Homology CDS 115047 116789 . + 0 ID=cds-OFO27564.1;Parent=gene-HMPREF3052_07500;Dbxref=NCBI_GP:OFO27564.1;Name=OFO27564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824866.1;locus_tag=HMPREF3052_07500;product=hypothetical protein;protein_id=OFO27564.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 117769 119055 . + . ID=gene-HMPREF3052_07505;Name=HMPREF3052_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07505 GCA_001815685.1|KV821641.1 Protein Homology CDS 117769 119055 . + 0 ID=cds-OFO27565.1;Parent=gene-HMPREF3052_07505;Dbxref=NCBI_GP:OFO27565.1;Name=OFO27565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680857.1;locus_tag=HMPREF3052_07505;product=phosphatase;protein_id=OFO27565.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 119058 119432 . + . ID=gene-HMPREF3052_07510;Name=HMPREF3052_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07510 GCA_001815685.1|KV821641.1 Protein Homology CDS 119058 119432 . + 0 ID=cds-OFO27566.1;Parent=gene-HMPREF3052_07510;Dbxref=NCBI_GP:OFO27566.1;Name=OFO27566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684411.1;locus_tag=HMPREF3052_07510;product=hypothetical protein;protein_id=OFO27566.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 119496 120203 . + . ID=gene-HMPREF3052_07515;Name=HMPREF3052_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07515 GCA_001815685.1|KV821641.1 Protein Homology CDS 119496 120203 . + 0 ID=cds-OFO27567.1;Parent=gene-HMPREF3052_07515;Dbxref=NCBI_GP:OFO27567.1;Name=OFO27567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684451.1;locus_tag=HMPREF3052_07515;product=acyltransferase;protein_id=OFO27567.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 120200 121190 . + . ID=gene-HMPREF3052_07520;Name=HMPREF3052_07520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_07520;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 120200 121190 . + 0 ID=cds-HMPREF3052_07520;Parent=gene-HMPREF3052_07520;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824860.1;locus_tag=HMPREF3052_07520;product=phosphatidate cytidylyltransferase;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 121298 121918 . + . ID=gene-HMPREF3052_07525;Name=HMPREF3052_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07525 GCA_001815685.1|KV821641.1 Protein Homology CDS 121298 121918 . + 0 ID=cds-OFO27568.1;Parent=gene-HMPREF3052_07525;Dbxref=NCBI_GP:OFO27568.1;Name=OFO27568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748765.1;locus_tag=HMPREF3052_07525;product=hypothetical protein;protein_id=OFO27568.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 122874 123791 . - . ID=gene-HMPREF3052_07530;Name=HMPREF3052_07530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_07530;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 122874 123791 . - 0 ID=cds-HMPREF3052_07530;Parent=gene-HMPREF3052_07530;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008953114.1;locus_tag=HMPREF3052_07530;product=cytochrome oxidase subunit III;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 123791 123988 . - . ID=gene-HMPREF3052_07535;Name=HMPREF3052_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07535 GCA_001815685.1|KV821641.1 Protein Homology CDS 123791 123988 . - 0 ID=cds-OFO27569.1;Parent=gene-HMPREF3052_07535;Dbxref=NCBI_GP:OFO27569.1;Name=OFO27569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519588.1;locus_tag=HMPREF3052_07535;product=cytochrome C oxidase subunit IV;protein_id=OFO27569.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 123993 124604 . - . ID=gene-HMPREF3052_07540;Name=HMPREF3052_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07540 GCA_001815685.1|KV821641.1 Protein Homology CDS 123993 124604 . - 0 ID=cds-OFO27570.1;Parent=gene-HMPREF3052_07540;Dbxref=NCBI_GP:OFO27570.1;Name=OFO27570.1;Note=CcoO%3B FixO;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242940.1;locus_tag=HMPREF3052_07540;product=cytochrome C oxidase Cbb3;protein_id=OFO27570.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 124629 126074 . - . ID=gene-HMPREF3052_07545;Name=HMPREF3052_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07545 GCA_001815685.1|KV821641.1 Protein Homology CDS 124629 126074 . - 0 ID=cds-OFO27571.1;Parent=gene-HMPREF3052_07545;Dbxref=NCBI_GP:OFO27571.1;Name=OFO27571.1;Note=CcoN%3B FixN;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425113.1;locus_tag=HMPREF3052_07545;product=cytochrome C oxidase Cbb3;protein_id=OFO27571.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 126395 128146 . + . ID=gene-HMPREF3052_07550;Name=HMPREF3052_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07550 GCA_001815685.1|KV821641.1 Protein Homology CDS 126395 128146 . + 0 ID=cds-OFO27572.1;Parent=gene-HMPREF3052_07550;Dbxref=NCBI_GP:OFO27572.1;Name=OFO27572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741680.1;locus_tag=HMPREF3052_07550;product=peptidase;protein_id=OFO27572.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 128213 128920 . + . ID=gene-HMPREF3052_07555;Name=HMPREF3052_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07555 GCA_001815685.1|KV821641.1 Protein Homology CDS 128213 128920 . + 0 ID=cds-OFO27573.1;Parent=gene-HMPREF3052_07555;Dbxref=NCBI_GP:OFO27573.1;Name=OFO27573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312368.1;locus_tag=HMPREF3052_07555;product=hypothetical protein;protein_id=OFO27573.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 128953 129393 . + . ID=gene-HMPREF3052_07560;Name=HMPREF3052_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07560 GCA_001815685.1|KV821641.1 Protein Homology CDS 128953 129393 . + 0 ID=cds-OFO27574.1;Parent=gene-HMPREF3052_07560;Dbxref=NCBI_GP:OFO27574.1;Name=OFO27574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748784.1;locus_tag=HMPREF3052_07560;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=OFO27574.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 129832 130128 . + . ID=gene-HMPREF3052_07565;Name=HMPREF3052_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07565 GCA_001815685.1|KV821641.1 Protein Homology CDS 129832 130128 . + 0 ID=cds-OFO27575.1;Parent=gene-HMPREF3052_07565;Dbxref=NCBI_GP:OFO27575.1;Name=OFO27575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519584.1;locus_tag=HMPREF3052_07565;product=transcriptional regulator;protein_id=OFO27575.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 130148 132706 . + . ID=gene-HMPREF3052_07570;Name=HMPREF3052_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07570 GCA_001815685.1|KV821641.1 Protein Homology CDS 130148 132706 . + 0 ID=cds-OFO27576.1;Parent=gene-HMPREF3052_07570;Dbxref=NCBI_GP:OFO27576.1;Name=OFO27576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748787.1;locus_tag=HMPREF3052_07570;product=protein-P-II uridylyltransferase;protein_id=OFO27576.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 133498 134043 . + . ID=gene-HMPREF3052_07575;Name=HMPREF3052_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07575 GCA_001815685.1|KV821641.1 Protein Homology CDS 133498 134043 . + 0 ID=cds-OFO27577.1;Parent=gene-HMPREF3052_07575;Dbxref=NCBI_GP:OFO27577.1;Name=OFO27577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684448.1;locus_tag=HMPREF3052_07575;product=fimbrial protein;protein_id=OFO27577.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 134157 134615 . + . ID=gene-HMPREF3052_07580;Name=HMPREF3052_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07580 GCA_001815685.1|KV821641.1 Protein Homology CDS 134157 134615 . + 0 ID=cds-OFO27578.1;Parent=gene-HMPREF3052_07580;Dbxref=NCBI_GP:OFO27578.1;Name=OFO27578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684439.1;locus_tag=HMPREF3052_07580;product=prokaryotic N- methylation motif protein;protein_id=OFO27578.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 135009 135491 . + . ID=gene-HMPREF3052_07585;Name=HMPREF3052_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07585 GCA_001815685.1|KV821641.1 Protein Homology CDS 135009 135491 . + 0 ID=cds-OFO27579.1;Parent=gene-HMPREF3052_07585;Dbxref=NCBI_GP:OFO27579.1;Name=OFO27579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273102.1;locus_tag=HMPREF3052_07585;product=ArsR family transcriptional regulator;protein_id=OFO27579.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 135609 136205 . + . ID=gene-HMPREF3052_07590;Name=HMPREF3052_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07590 GCA_001815685.1|KV821641.1 Protein Homology CDS 135609 136205 . + 0 ID=cds-OFO27580.1;Parent=gene-HMPREF3052_07590;Dbxref=NCBI_GP:OFO27580.1;Name=OFO27580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684428.1;locus_tag=HMPREF3052_07590;product=peptidase;protein_id=OFO27580.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 136220 136579 . + . ID=gene-HMPREF3052_07595;Name=HMPREF3052_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07595 GCA_001815685.1|KV821641.1 Protein Homology CDS 136220 136579 . + 0 ID=cds-OFO27581.1;Parent=gene-HMPREF3052_07595;Dbxref=NCBI_GP:OFO27581.1;Name=OFO27581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753889.1;locus_tag=HMPREF3052_07595;product=hypothetical protein;protein_id=OFO27581.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 137022 138440 . + . ID=gene-HMPREF3052_07600;Name=HMPREF3052_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07600 GCA_001815685.1|KV821641.1 Protein Homology CDS 137022 138440 . + 0 ID=cds-OFO27582.1;Parent=gene-HMPREF3052_07600;Dbxref=NCBI_GP:OFO27582.1;Name=OFO27582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270091.1;locus_tag=HMPREF3052_07600;product=sodium:proton antiporter;protein_id=OFO27582.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 138777 140120 . + . ID=gene-HMPREF3052_07605;Name=HMPREF3052_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07605 GCA_001815685.1|KV821641.1 Protein Homology CDS 138777 140120 . + 0 ID=cds-OFO27583.1;Parent=gene-HMPREF3052_07605;Dbxref=NCBI_GP:OFO27583.1;Name=OFO27583.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273106.1;locus_tag=HMPREF3052_07605;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=OFO27583.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 140123 141355 . + . ID=gene-HMPREF3052_07610;Name=HMPREF3052_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07610 GCA_001815685.1|KV821641.1 Protein Homology CDS 140123 141355 . + 0 ID=cds-OFO27584.1;Parent=gene-HMPREF3052_07610;Dbxref=NCBI_GP:OFO27584.1;Name=OFO27584.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214356.1;locus_tag=HMPREF3052_07610;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=OFO27584.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 141348 142124 . + . ID=gene-HMPREF3052_07615;Name=HMPREF3052_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07615 GCA_001815685.1|KV821641.1 Protein Homology CDS 141348 142124 . + 0 ID=cds-OFO27585.1;Parent=gene-HMPREF3052_07615;Dbxref=NCBI_GP:OFO27585.1;Name=OFO27585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768357.1;locus_tag=HMPREF3052_07615;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit C;protein_id=OFO27585.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 142124 142750 . + . ID=gene-HMPREF3052_07620;Name=HMPREF3052_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07620 GCA_001815685.1|KV821641.1 Protein Homology CDS 142124 142750 . + 0 ID=cds-OFO27586.1;Parent=gene-HMPREF3052_07620;Dbxref=NCBI_GP:OFO27586.1;Name=OFO27586.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684313.1;locus_tag=HMPREF3052_07620;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=OFO27586.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 142754 143347 . + . ID=gene-HMPREF3052_07625;Name=HMPREF3052_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07625 GCA_001815685.1|KV821641.1 Protein Homology CDS 142754 143347 . + 0 ID=cds-OFO27587.1;Parent=gene-HMPREF3052_07625;Dbxref=NCBI_GP:OFO27587.1;Name=OFO27587.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255459.1;locus_tag=HMPREF3052_07625;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=OFO27587.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 143361 144578 . + . ID=gene-HMPREF3052_07630;Name=HMPREF3052_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07630 GCA_001815685.1|KV821641.1 Protein Homology CDS 143361 144578 . + 0 ID=cds-OFO27588.1;Parent=gene-HMPREF3052_07630;Dbxref=NCBI_GP:OFO27588.1;Name=OFO27588.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241210.1;locus_tag=HMPREF3052_07630;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=OFO27588.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 144745 145779 . + . ID=gene-HMPREF3052_07635;Name=HMPREF3052_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07635 GCA_001815685.1|KV821641.1 Protein Homology CDS 144745 145779 . + 0 ID=cds-OFO27754.1;Parent=gene-HMPREF3052_07635;Dbxref=NCBI_GP:OFO27754.1;Name=OFO27754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219687.1;locus_tag=HMPREF3052_07635;product=thiamine biosynthesis protein ApbE;protein_id=OFO27754.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 145797 146018 . + . ID=gene-HMPREF3052_07640;Name=HMPREF3052_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07640 GCA_001815685.1|KV821641.1 Protein Homology CDS 145797 146018 . + 0 ID=cds-OFO27589.1;Parent=gene-HMPREF3052_07640;Dbxref=NCBI_GP:OFO27589.1;Name=OFO27589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680888.1;locus_tag=HMPREF3052_07640;product=hypothetical protein;protein_id=OFO27589.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 146247 146402 . - . ID=gene-HMPREF3052_07645;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF3052_07645 GCA_001815685.1|KV821641.1 Protein Homology CDS 146247 146402 . - 0 ID=cds-OFO27590.1;Parent=gene-HMPREF3052_07645;Dbxref=NCBI_GP:OFO27590.1;Name=OFO27590.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012696028.1;locus_tag=HMPREF3052_07645;product=50S ribosomal protein L33;protein_id=OFO27590.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 146433 146666 . - . ID=gene-HMPREF3052_07650;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HMPREF3052_07650 GCA_001815685.1|KV821641.1 Protein Homology CDS 146433 146666 . - 0 ID=cds-OFO27591.1;Parent=gene-HMPREF3052_07650;Dbxref=NCBI_GP:OFO27591.1;Name=OFO27591.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=HMPREF3052_07650;product=50S ribosomal protein L28;protein_id=OFO27591.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 146917 148245 . - . ID=gene-HMPREF3052_07655;Name=HMPREF3052_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07655 GCA_001815685.1|KV821641.1 Protein Homology CDS 146917 148245 . - 0 ID=cds-OFO27592.1;Parent=gene-HMPREF3052_07655;Dbxref=NCBI_GP:OFO27592.1;Name=OFO27592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684363.1;locus_tag=HMPREF3052_07655;product=branched-chain amino acid transporter II carrier protein;protein_id=OFO27592.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 148247 149143 . - . ID=gene-HMPREF3052_07660;Name=HMPREF3052_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07660 GCA_001815685.1|KV821641.1 Protein Homology CDS 148247 149143 . - 0 ID=cds-OFO27593.1;Parent=gene-HMPREF3052_07660;Dbxref=NCBI_GP:OFO27593.1;Name=OFO27593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519564.1;locus_tag=HMPREF3052_07660;product=segregation and condensation protein A;protein_id=OFO27593.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 149236 149703 . - . ID=gene-HMPREF3052_07665;Name=HMPREF3052_07665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_07665;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 149236 149703 . - 0 ID=cds-HMPREF3052_07665;Parent=gene-HMPREF3052_07665;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684403.1;locus_tag=HMPREF3052_07665;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 149717 150493 . - . ID=gene-HMPREF3052_07670;Name=HMPREF3052_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07670 GCA_001815685.1|KV821641.1 Protein Homology CDS 149717 150493 . - 0 ID=cds-OFO27594.1;Parent=gene-HMPREF3052_07670;Dbxref=NCBI_GP:OFO27594.1;Name=OFO27594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748819.1;locus_tag=HMPREF3052_07670;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=OFO27594.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 150680 151144 . + . ID=gene-HMPREF3052_07675;Name=HMPREF3052_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07675 GCA_001815685.1|KV821641.1 Protein Homology CDS 150680 151144 . + 0 ID=cds-OFO27595.1;Parent=gene-HMPREF3052_07675;Dbxref=NCBI_GP:OFO27595.1;Name=OFO27595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713854.1;locus_tag=HMPREF3052_07675;product=universal stress protein;protein_id=OFO27595.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 151228 152511 . - . ID=gene-HMPREF3052_07680;Name=HMPREF3052_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07680 GCA_001815685.1|KV821641.1 Protein Homology CDS 151228 152511 . - 0 ID=cds-OFO27596.1;Parent=gene-HMPREF3052_07680;Dbxref=NCBI_GP:OFO27596.1;Name=OFO27596.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519560.1;locus_tag=HMPREF3052_07680;product=glutamate-1-semialdehyde aminotransferase;protein_id=OFO27596.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 152710 153105 . + . ID=gene-HMPREF3052_07685;Name=HMPREF3052_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07685 GCA_001815685.1|KV821641.1 Protein Homology CDS 152710 153105 . + 0 ID=cds-OFO27597.1;Parent=gene-HMPREF3052_07685;Dbxref=NCBI_GP:OFO27597.1;Name=OFO27597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684407.1;locus_tag=HMPREF3052_07685;product=hypothetical protein;protein_id=OFO27597.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 153179 154501 . + . ID=gene-HMPREF3052_07690;Name=HMPREF3052_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07690 GCA_001815685.1|KV821641.1 Protein Homology CDS 153179 154501 . + 0 ID=cds-OFO27598.1;Parent=gene-HMPREF3052_07690;Dbxref=NCBI_GP:OFO27598.1;Name=OFO27598.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680901.1;locus_tag=HMPREF3052_07690;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB;protein_id=OFO27598.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 154729 156039 . + . ID=gene-HMPREF3052_07695;Name=HMPREF3052_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07695 GCA_001815685.1|KV821641.1 Protein Homology CDS 154729 156039 . + 0 ID=cds-OFO27599.1;Parent=gene-HMPREF3052_07695;Dbxref=NCBI_GP:OFO27599.1;Name=OFO27599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212503.1;locus_tag=HMPREF3052_07695;product=guanine permease;protein_id=OFO27599.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 156123 156680 . - . ID=gene-HMPREF3052_07700;Name=HMPREF3052_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07700 GCA_001815685.1|KV821641.1 Protein Homology CDS 156123 156680 . - 0 ID=cds-OFO27755.1;Parent=gene-HMPREF3052_07700;Dbxref=NCBI_GP:OFO27755.1;Name=OFO27755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680903.1;locus_tag=HMPREF3052_07700;product=hypothetical protein;protein_id=OFO27755.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 157075 157149 . - . ID=gene-HMPREF3052_07705;Name=HMPREF3052_07705;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_07705 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 157075 157149 . - . ID=rna-HMPREF3052_07705;Parent=gene-HMPREF3052_07705;anticodon=(pos:complement(157114..157116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07705;product=tRNA-Glu GCA_001815685.1|KV821641.1 tRNAscan-SE exon 157075 157149 . - . ID=exon-HMPREF3052_07705-1;Parent=rna-HMPREF3052_07705;anticodon=(pos:complement(157114..157116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07705;product=tRNA-Glu GCA_001815685.1|KV821641.1 Genbank gene 157162 157238 . - . ID=gene-HMPREF3052_07710;Name=HMPREF3052_07710;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_07710 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 157162 157238 . - . ID=rna-HMPREF3052_07710;Parent=gene-HMPREF3052_07710;anticodon=(pos:complement(157202..157204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07710;product=tRNA-Arg GCA_001815685.1|KV821641.1 tRNAscan-SE exon 157162 157238 . - . ID=exon-HMPREF3052_07710-1;Parent=rna-HMPREF3052_07710;anticodon=(pos:complement(157202..157204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07710;product=tRNA-Arg GCA_001815685.1|KV821641.1 Genbank gene 157371 158729 . - . ID=gene-HMPREF3052_07715;Name=HMPREF3052_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07715 GCA_001815685.1|KV821641.1 Protein Homology CDS 157371 158729 . - 0 ID=cds-OFO27600.1;Parent=gene-HMPREF3052_07715;Dbxref=NCBI_GP:OFO27600.1;Name=OFO27600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519554.1;locus_tag=HMPREF3052_07715;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=OFO27600.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 158786 160045 . - . ID=gene-HMPREF3052_07720;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=HMPREF3052_07720 GCA_001815685.1|KV821641.1 Protein Homology CDS 158786 160045 . - 0 ID=cds-OFO27601.1;Parent=gene-HMPREF3052_07720;Dbxref=NCBI_GP:OFO27601.1;Name=OFO27601.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823056.1;locus_tag=HMPREF3052_07720;product=transcription termination factor Rho;protein_id=OFO27601.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 160290 161192 . - . ID=gene-HMPREF3052_07725;Name=HMPREF3052_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07725 GCA_001815685.1|KV821641.1 Protein Homology CDS 160290 161192 . - 0 ID=cds-OFO27602.1;Parent=gene-HMPREF3052_07725;Dbxref=NCBI_GP:OFO27602.1;Name=OFO27602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687401.1;locus_tag=HMPREF3052_07725;product=hypothetical protein;protein_id=OFO27602.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 161276 162964 . - . ID=gene-HMPREF3052_07730;Name=HMPREF3052_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07730 GCA_001815685.1|KV821641.1 Protein Homology CDS 161276 162964 . - 0 ID=cds-OFO27603.1;Parent=gene-HMPREF3052_07730;Dbxref=NCBI_GP:OFO27603.1;Name=OFO27603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174098.1;locus_tag=HMPREF3052_07730;product=glutamine--tRNA ligase;protein_id=OFO27603.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 163070 163849 . - . ID=gene-HMPREF3052_07735;Name=HMPREF3052_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07735 GCA_001815685.1|KV821641.1 Protein Homology CDS 163070 163849 . - 0 ID=cds-OFO27604.1;Parent=gene-HMPREF3052_07735;Dbxref=NCBI_GP:OFO27604.1;Name=OFO27604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684517.1;locus_tag=HMPREF3052_07735;product=DeoR family transcriptional regulator;protein_id=OFO27604.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 163922 164635 . - . ID=gene-HMPREF3052_07740;Name=HMPREF3052_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07740 GCA_001815685.1|KV821641.1 Protein Homology CDS 163922 164635 . - 0 ID=cds-OFO27605.1;Parent=gene-HMPREF3052_07740;Dbxref=NCBI_GP:OFO27605.1;Name=OFO27605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684533.1;locus_tag=HMPREF3052_07740;product=GntR family transcriptional regulator;protein_id=OFO27605.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 164898 165317 . - . ID=gene-HMPREF3052_07745;Name=HMPREF3052_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07745 GCA_001815685.1|KV821641.1 Protein Homology CDS 164898 165317 . - 0 ID=cds-OFO27606.1;Parent=gene-HMPREF3052_07745;Dbxref=NCBI_GP:OFO27606.1;Name=OFO27606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519549.1;locus_tag=HMPREF3052_07745;product=peroxiredoxin;protein_id=OFO27606.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 165429 166238 . - . ID=gene-HMPREF3052_07750;Name=HMPREF3052_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07750 GCA_001815685.1|KV821641.1 Protein Homology CDS 165429 166238 . - 0 ID=cds-OFO27607.1;Parent=gene-HMPREF3052_07750;Dbxref=NCBI_GP:OFO27607.1;Name=OFO27607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748851.1;locus_tag=HMPREF3052_07750;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=OFO27607.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 166463 169315 . - . ID=gene-HMPREF3052_07755;Name=HMPREF3052_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07755 GCA_001815685.1|KV821641.1 Protein Homology CDS 166463 169315 . - 0 ID=cds-OFO27608.1;Parent=gene-HMPREF3052_07755;Dbxref=NCBI_GP:OFO27608.1;Name=OFO27608.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573860.1;locus_tag=HMPREF3052_07755;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=OFO27608.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 169371 169922 . - . ID=gene-HMPREF3052_07760;Name=HMPREF3052_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07760 GCA_001815685.1|KV821641.1 Protein Homology CDS 169371 169922 . - 0 ID=cds-OFO27609.1;Parent=gene-HMPREF3052_07760;Dbxref=NCBI_GP:OFO27609.1;Name=OFO27609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714345.1;locus_tag=HMPREF3052_07760;product=DNA-3-methyladenine glycosylase;protein_id=OFO27609.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 170029 170427 . - . ID=gene-HMPREF3052_07765;Name=HMPREF3052_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07765 GCA_001815685.1|KV821641.1 Protein Homology CDS 170029 170427 . - 0 ID=cds-OFO27610.1;Parent=gene-HMPREF3052_07765;Dbxref=NCBI_GP:OFO27610.1;Name=OFO27610.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679879.1;locus_tag=HMPREF3052_07765;product=glycine cleavage system protein H;protein_id=OFO27610.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 170464 171081 . - . ID=gene-HMPREF3052_07770;Name=HMPREF3052_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07770 GCA_001815685.1|KV821641.1 Protein Homology CDS 170464 171081 . - 0 ID=cds-OFO27611.1;Parent=gene-HMPREF3052_07770;Dbxref=NCBI_GP:OFO27611.1;Name=OFO27611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273100.1;locus_tag=HMPREF3052_07770;product=hypothetical protein;protein_id=OFO27611.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 171151 172251 . - . ID=gene-HMPREF3052_07775;Name=HMPREF3052_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07775 GCA_001815685.1|KV821641.1 Protein Homology CDS 171151 172251 . - 0 ID=cds-OFO27612.1;Parent=gene-HMPREF3052_07775;Dbxref=NCBI_GP:OFO27612.1;Name=OFO27612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519543.1;locus_tag=HMPREF3052_07775;product=glycine cleavage system protein T;protein_id=OFO27612.1;transl_table=11 GCA_001815685.1|KV821641.1 cmsearch binding_site 172462 172559 . - . ID=id-KV821641.1:172462..172559;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 GCA_001815685.1|KV821641.1 Genbank gene 172765 174276 . + . ID=gene-HMPREF3052_07780;Name=HMPREF3052_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07780 GCA_001815685.1|KV821641.1 Protein Homology CDS 172765 174276 . + 0 ID=cds-OFO27613.1;Parent=gene-HMPREF3052_07780;Dbxref=NCBI_GP:OFO27613.1;Name=OFO27613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVQ5.1;locus_tag=HMPREF3052_07780;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=OFO27613.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 174352 175722 . - . ID=gene-HMPREF3052_07785;Name=HMPREF3052_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07785 GCA_001815685.1|KV821641.1 Protein Homology CDS 174352 175722 . - 0 ID=cds-OFO27614.1;Parent=gene-HMPREF3052_07785;Dbxref=NCBI_GP:OFO27614.1;Name=OFO27614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682125.1;locus_tag=HMPREF3052_07785;product=chloride channel protein EriC;protein_id=OFO27614.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 175800 177020 . - . ID=gene-HMPREF3052_07790;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=HMPREF3052_07790 GCA_001815685.1|KV821641.1 Protein Homology CDS 175800 177020 . - 0 ID=cds-OFO27615.1;Parent=gene-HMPREF3052_07790;Dbxref=NCBI_GP:OFO27615.1;Name=OFO27615.1;Note=bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate;gbkey=CDS;gene=argJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742788.1;locus_tag=HMPREF3052_07790;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=OFO27615.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 177063 177761 . - . ID=gene-HMPREF3052_07795;Name=HMPREF3052_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07795 GCA_001815685.1|KV821641.1 Protein Homology CDS 177063 177761 . - 0 ID=cds-OFO27616.1;Parent=gene-HMPREF3052_07795;Dbxref=NCBI_GP:OFO27616.1;Name=OFO27616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682129.1;locus_tag=HMPREF3052_07795;product=murein hydrolase transporter LrgB;protein_id=OFO27616.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 177761 178105 . - . ID=gene-HMPREF3052_07800;Name=HMPREF3052_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07800 GCA_001815685.1|KV821641.1 Protein Homology CDS 177761 178105 . - 0 ID=cds-OFO27617.1;Parent=gene-HMPREF3052_07800;Dbxref=NCBI_GP:OFO27617.1;Name=OFO27617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684481.1;locus_tag=HMPREF3052_07800;product=murein hydrolase transporter LrgA;protein_id=OFO27617.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 178291 179040 . - . ID=gene-HMPREF3052_07805;Name=HMPREF3052_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07805 GCA_001815685.1|KV821641.1 Protein Homology CDS 178291 179040 . - 0 ID=cds-OFO27618.1;Parent=gene-HMPREF3052_07805;Dbxref=NCBI_GP:OFO27618.1;Name=OFO27618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519537.1;locus_tag=HMPREF3052_07805;product=molybdopterin-synthase adenylyltransferase;protein_id=OFO27618.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 179087 179551 . - . ID=gene-HMPREF3052_07810;Name=HMPREF3052_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07810 GCA_001815685.1|KV821641.1 Protein Homology CDS 179087 179551 . - 0 ID=cds-OFO27619.1;Parent=gene-HMPREF3052_07810;Dbxref=NCBI_GP:OFO27619.1;Name=OFO27619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684532.1;locus_tag=HMPREF3052_07810;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=OFO27619.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 179739 182441 . + . ID=gene-HMPREF3052_07815;Name=HMPREF3052_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07815 GCA_001815685.1|KV821641.1 Protein Homology CDS 179739 182441 . + 0 ID=cds-OFO27620.1;Parent=gene-HMPREF3052_07815;Dbxref=NCBI_GP:OFO27620.1;Name=OFO27620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271124.1;locus_tag=HMPREF3052_07815;product=phosphoenolpyruvate carboxylase;protein_id=OFO27620.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 182582 183673 . + . ID=gene-HMPREF3052_07820;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF3052_07820 GCA_001815685.1|KV821641.1 Protein Homology CDS 182582 183673 . + 0 ID=cds-OFO27621.1;Parent=gene-HMPREF3052_07820;Dbxref=NCBI_GP:OFO27621.1;Name=OFO27621.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642527.1;locus_tag=HMPREF3052_07820;product=GTP-binding protein YchF;protein_id=OFO27621.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 183743 185041 . + . ID=gene-HMPREF3052_07825;Name=HMPREF3052_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07825 GCA_001815685.1|KV821641.1 Protein Homology CDS 183743 185041 . + 0 ID=cds-OFO27622.1;Parent=gene-HMPREF3052_07825;Dbxref=NCBI_GP:OFO27622.1;Name=OFO27622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256036.1;locus_tag=HMPREF3052_07825;product=tyrosine--tRNA ligase;protein_id=OFO27622.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 185213 186109 . - . ID=gene-HMPREF3052_07830;Name=HMPREF3052_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07830 GCA_001815685.1|KV821641.1 Protein Homology CDS 185213 186109 . - 0 ID=cds-OFO27623.1;Parent=gene-HMPREF3052_07830;Dbxref=NCBI_GP:OFO27623.1;Name=OFO27623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519531.1;locus_tag=HMPREF3052_07830;product=molecular chaperone Hsp33;protein_id=OFO27623.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 186370 186999 . + . ID=gene-HMPREF3052_07835;Name=HMPREF3052_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07835 GCA_001815685.1|KV821641.1 Protein Homology CDS 186370 186999 . + 0 ID=cds-OFO27624.1;Parent=gene-HMPREF3052_07835;Dbxref=NCBI_GP:OFO27624.1;Name=OFO27624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682150.1;locus_tag=HMPREF3052_07835;product=hypothetical protein;protein_id=OFO27624.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 187008 187229 . + . ID=gene-HMPREF3052_07840;Name=HMPREF3052_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07840 GCA_001815685.1|KV821641.1 Protein Homology CDS 187008 187229 . + 0 ID=cds-OFO27756.1;Parent=gene-HMPREF3052_07840;Dbxref=NCBI_GP:OFO27756.1;Name=OFO27756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519529.1;locus_tag=HMPREF3052_07840;product=hypothetical protein;protein_id=OFO27756.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 187309 188709 . - . ID=gene-HMPREF3052_07845;Name=HMPREF3052_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07845 GCA_001815685.1|KV821641.1 Protein Homology CDS 187309 188709 . - 0 ID=cds-OFO27625.1;Parent=gene-HMPREF3052_07845;Dbxref=NCBI_GP:OFO27625.1;Name=OFO27625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224807.1;locus_tag=HMPREF3052_07845;product=L-serine ammonia-lyase;protein_id=OFO27625.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 188775 190664 . - . ID=gene-HMPREF3052_07850;Name=HMPREF3052_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07850 GCA_001815685.1|KV821641.1 Protein Homology CDS 188775 190664 . - 0 ID=cds-OFO27626.1;Parent=gene-HMPREF3052_07850;Dbxref=NCBI_GP:OFO27626.1;Name=OFO27626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684549.1;locus_tag=HMPREF3052_07850;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=OFO27626.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 190798 191355 . + . ID=gene-HMPREF3052_07855;Name=HMPREF3052_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07855 GCA_001815685.1|KV821641.1 Protein Homology CDS 190798 191355 . + 0 ID=cds-OFO27627.1;Parent=gene-HMPREF3052_07855;Dbxref=NCBI_GP:OFO27627.1;Name=OFO27627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748898.1;locus_tag=HMPREF3052_07855;product=oligoribonuclease;protein_id=OFO27627.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 191419 191841 . + . ID=gene-HMPREF3052_07860;Name=HMPREF3052_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07860 GCA_001815685.1|KV821641.1 Protein Homology CDS 191419 191841 . + 0 ID=cds-OFO27628.1;Parent=gene-HMPREF3052_07860;Dbxref=NCBI_GP:OFO27628.1;Name=OFO27628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217869.1;locus_tag=HMPREF3052_07860;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=OFO27628.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 191953 192309 . + . ID=gene-HMPREF3052_07865;Name=HMPREF3052_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07865 GCA_001815685.1|KV821641.1 Protein Homology CDS 191953 192309 . + 0 ID=cds-OFO27629.1;Parent=gene-HMPREF3052_07865;Dbxref=NCBI_GP:OFO27629.1;Name=OFO27629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002259854.1;locus_tag=HMPREF3052_07865;product=hypothetical protein;protein_id=OFO27629.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 192560 192931 . + . ID=gene-HMPREF3052_07870;Name=HMPREF3052_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07870 GCA_001815685.1|KV821641.1 Protein Homology CDS 192560 192931 . + 0 ID=cds-OFO27630.1;Parent=gene-HMPREF3052_07870;Dbxref=NCBI_GP:OFO27630.1;Name=OFO27630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449424.1;locus_tag=HMPREF3052_07870;product=hypothetical protein;protein_id=OFO27630.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 193038 193673 . + . ID=gene-HMPREF3052_07875;Name=HMPREF3052_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07875 GCA_001815685.1|KV821641.1 Protein Homology CDS 193038 193673 . + 0 ID=cds-OFO27631.1;Parent=gene-HMPREF3052_07875;Dbxref=NCBI_GP:OFO27631.1;Name=OFO27631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520405.1;locus_tag=HMPREF3052_07875;product=7-carboxy-7-deazaguanine synthase;protein_id=OFO27631.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 194006 195592 . + . ID=gene-HMPREF3052_07880;Name=HMPREF3052_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07880 GCA_001815685.1|KV821641.1 Protein Homology CDS 194006 195592 . + 0 ID=cds-OFO27632.1;Parent=gene-HMPREF3052_07880;Dbxref=NCBI_GP:OFO27632.1;Name=OFO27632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684590.1;locus_tag=HMPREF3052_07880;product=lactate permease;protein_id=OFO27632.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 195890 196252 . + . ID=gene-HMPREF3052_07885;Name=HMPREF3052_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07885 GCA_001815685.1|KV821641.1 Protein Homology CDS 195890 196252 . + 0 ID=cds-OFO27633.1;Parent=gene-HMPREF3052_07885;Dbxref=NCBI_GP:OFO27633.1;Name=OFO27633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682173.1;locus_tag=HMPREF3052_07885;product=adhesin;protein_id=OFO27633.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 196393 197496 . - . ID=gene-HMPREF3052_07890;Name=HMPREF3052_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07890 GCA_001815685.1|KV821641.1 Protein Homology CDS 196393 197496 . - 0 ID=cds-OFO27634.1;Parent=gene-HMPREF3052_07890;Dbxref=NCBI_GP:OFO27634.1;Name=OFO27634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174415.1;locus_tag=HMPREF3052_07890;product=DNA polymerase III subunit beta;protein_id=OFO27634.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 197603 199171 . - . ID=gene-HMPREF3052_07895;Name=HMPREF3052_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07895 GCA_001815685.1|KV821641.1 Protein Homology CDS 197603 199171 . - 0 ID=cds-OFO27635.1;Parent=gene-HMPREF3052_07895;Dbxref=NCBI_GP:OFO27635.1;Name=OFO27635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758099.1;locus_tag=HMPREF3052_07895;product=chromosomal replication initiation protein DnaA;protein_id=OFO27635.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 199490 199624 . + . ID=gene-HMPREF3052_07900;Name=HMPREF3052_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07900 GCA_001815685.1|KV821641.1 Protein Homology CDS 199490 199624 . + 0 ID=cds-OFO27636.1;Parent=gene-HMPREF3052_07900;Dbxref=NCBI_GP:OFO27636.1;Name=OFO27636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958174.1;locus_tag=HMPREF3052_07900;product=50S ribosomal protein L34;protein_id=OFO27636.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 199627 199968 . + . ID=gene-HMPREF3052_07905;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HMPREF3052_07905 GCA_001815685.1|KV821641.1 Protein Homology CDS 199627 199968 . + 0 ID=cds-OFO27637.1;Parent=gene-HMPREF3052_07905;Dbxref=NCBI_GP:OFO27637.1;Name=OFO27637.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682177.1;locus_tag=HMPREF3052_07905;product=ribonuclease P protein component;protein_id=OFO27637.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 199965 200186 . + . ID=gene-HMPREF3052_07910;Name=HMPREF3052_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07910 GCA_001815685.1|KV821641.1 Protein Homology CDS 199965 200186 . + 0 ID=cds-OFO27638.1;Parent=gene-HMPREF3052_07910;Dbxref=NCBI_GP:OFO27638.1;Name=OFO27638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682178.1;locus_tag=HMPREF3052_07910;product=membrane protein insertion efficiency factor YidD;protein_id=OFO27638.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 200305 201951 . + . ID=gene-HMPREF3052_07915;Name=HMPREF3052_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07915 GCA_001815685.1|KV821641.1 Protein Homology CDS 200305 201951 . + 0 ID=cds-OFO27639.1;Parent=gene-HMPREF3052_07915;Dbxref=NCBI_GP:OFO27639.1;Name=OFO27639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JW48.1;locus_tag=HMPREF3052_07915;product=membrane protein insertase YidC;protein_id=OFO27639.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 202047 202757 . - . ID=gene-HMPREF3052_07920;Name=HMPREF3052_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07920 GCA_001815685.1|KV821641.1 Protein Homology CDS 202047 202757 . - 0 ID=cds-OFO27640.1;Parent=gene-HMPREF3052_07920;Dbxref=NCBI_GP:OFO27640.1;Name=OFO27640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520414.1;locus_tag=HMPREF3052_07920;product=tetrapyrrole methylase;protein_id=OFO27640.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 202812 203402 . - . ID=gene-HMPREF3052_07925;Name=HMPREF3052_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07925 GCA_001815685.1|KV821641.1 Protein Homology CDS 202812 203402 . - 0 ID=cds-OFO27757.1;Parent=gene-HMPREF3052_07925;Dbxref=NCBI_GP:OFO27757.1;Name=OFO27757.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449528.1;locus_tag=HMPREF3052_07925;product=septum formation inhibitor Maf;protein_id=OFO27757.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 203458 203961 . + . ID=gene-HMPREF3052_07930;Name=HMPREF3052_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07930 GCA_001815685.1|KV821641.1 Protein Homology CDS 203458 203961 . + 0 ID=cds-OFO27641.1;Parent=gene-HMPREF3052_07930;Dbxref=NCBI_GP:OFO27641.1;Name=OFO27641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748922.1;locus_tag=HMPREF3052_07930;product=hypothetical protein;protein_id=OFO27641.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 203995 204174 . + . ID=gene-HMPREF3052_07935;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF3052_07935 GCA_001815685.1|KV821641.1 Protein Homology CDS 203995 204174 . + 0 ID=cds-OFO27642.1;Parent=gene-HMPREF3052_07935;Dbxref=NCBI_GP:OFO27642.1;Name=OFO27642.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642843.1;locus_tag=HMPREF3052_07935;product=50S ribosomal protein L32;protein_id=OFO27642.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 204267 204791 . + . ID=gene-HMPREF3052_07940;Name=HMPREF3052_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07940 GCA_001815685.1|KV821641.1 Protein Homology CDS 204267 204791 . + 0 ID=cds-OFO27643.1;Parent=gene-HMPREF3052_07940;Dbxref=NCBI_GP:OFO27643.1;Name=OFO27643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520417.1;locus_tag=HMPREF3052_07940;product=phosphoribosyltransferase;protein_id=OFO27643.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 204914 205984 . + . ID=gene-HMPREF3052_07945;Name=HMPREF3052_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07945 GCA_001815685.1|KV821641.1 Protein Homology CDS 204914 205984 . + 0 ID=cds-OFO27644.1;Parent=gene-HMPREF3052_07945;Dbxref=NCBI_GP:OFO27644.1;Name=OFO27644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748926.1;locus_tag=HMPREF3052_07945;product=phosphate acyltransferase;protein_id=OFO27644.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 206137 207099 . + . ID=gene-HMPREF3052_07950;Name=HMPREF3052_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07950 GCA_001815685.1|KV821641.1 Protein Homology CDS 206137 207099 . + 0 ID=cds-OFO27645.1;Parent=gene-HMPREF3052_07950;Dbxref=NCBI_GP:OFO27645.1;Name=OFO27645.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773939.1;locus_tag=HMPREF3052_07950;product=3-oxoacyl-ACP synthase;protein_id=OFO27645.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 207151 207498 . + . ID=gene-HMPREF3052_07955;Name=HMPREF3052_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07955 GCA_001815685.1|KV821641.1 Protein Homology CDS 207151 207498 . + 0 ID=cds-OFO27646.1;Parent=gene-HMPREF3052_07955;Dbxref=NCBI_GP:OFO27646.1;Name=OFO27646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682186.1;locus_tag=HMPREF3052_07955;product=hypothetical protein;protein_id=OFO27646.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 207508 208434 . + . ID=gene-HMPREF3052_07960;Name=HMPREF3052_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07960 GCA_001815685.1|KV821641.1 Protein Homology CDS 207508 208434 . + 0 ID=cds-OFO27647.1;Parent=gene-HMPREF3052_07960;Dbxref=NCBI_GP:OFO27647.1;Name=OFO27647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270112.1;locus_tag=HMPREF3052_07960;product=malonyl CoA-acyl carrier protein transacylase;protein_id=OFO27647.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 208733 209782 . + . ID=gene-HMPREF3052_07965;Name=HMPREF3052_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07965 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 208733 209782 . + 0 ID=cds-OFO27648.1;Parent=gene-HMPREF3052_07965;Dbxref=NCBI_GP:OFO27648.1;Name=OFO27648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_07965;product=hypothetical protein;protein_id=OFO27648.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 209904 210752 . + . ID=gene-HMPREF3052_07970;Name=HMPREF3052_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07970 GCA_001815685.1|KV821641.1 Protein Homology CDS 209904 210752 . + 0 ID=cds-OFO27649.1;Parent=gene-HMPREF3052_07970;Dbxref=NCBI_GP:OFO27649.1;Name=OFO27649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684594.1;locus_tag=HMPREF3052_07970;product=glycosyltransferase%2C group 2 family protein;protein_id=OFO27649.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 210759 211583 . + . ID=gene-HMPREF3052_07975;Name=HMPREF3052_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07975 GCA_001815685.1|KV821641.1 Protein Homology CDS 210759 211583 . + 0 ID=cds-OFO27650.1;Parent=gene-HMPREF3052_07975;Dbxref=NCBI_GP:OFO27650.1;Name=OFO27650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684497.1;locus_tag=HMPREF3052_07975;product=hypothetical protein;protein_id=OFO27650.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 211665 212411 . + . ID=gene-HMPREF3052_07980;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF3052_07980 GCA_001815685.1|KV821641.1 Protein Homology CDS 211665 212411 . + 0 ID=cds-OFO27651.1;Parent=gene-HMPREF3052_07980;Dbxref=NCBI_GP:OFO27651.1;Name=OFO27651.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218032.1;locus_tag=HMPREF3052_07980;product=beta-ketoacyl-ACP reductase;protein_id=OFO27651.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 212680 214662 . + . ID=gene-HMPREF3052_07985;Name=HMPREF3052_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_07985 GCA_001815685.1|KV821641.1 Protein Homology CDS 212680 214662 . + 0 ID=cds-OFO27652.1;Parent=gene-HMPREF3052_07985;Dbxref=NCBI_GP:OFO27652.1;Name=OFO27652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682200.1;locus_tag=HMPREF3052_07985;product=potassium transporter;protein_id=OFO27652.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 214732 214807 . + . ID=gene-HMPREF3052_07990;Name=HMPREF3052_07990;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_07990 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 214732 214807 . + . ID=rna-HMPREF3052_07990;Parent=gene-HMPREF3052_07990;anticodon=(pos:214765..214767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07990;product=tRNA-Val GCA_001815685.1|KV821641.1 tRNAscan-SE exon 214732 214807 . + . ID=exon-HMPREF3052_07990-1;Parent=rna-HMPREF3052_07990;anticodon=(pos:214765..214767);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07990;product=tRNA-Val GCA_001815685.1|KV821641.1 Genbank gene 214840 214916 . + . ID=gene-HMPREF3052_07995;Name=HMPREF3052_07995;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_07995 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 214840 214916 . + . ID=rna-HMPREF3052_07995;Parent=gene-HMPREF3052_07995;anticodon=(pos:214874..214876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07995;product=tRNA-Asp GCA_001815685.1|KV821641.1 tRNAscan-SE exon 214840 214916 . + . ID=exon-HMPREF3052_07995-1;Parent=rna-HMPREF3052_07995;anticodon=(pos:214874..214876);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_07995;product=tRNA-Asp GCA_001815685.1|KV821641.1 Genbank gene 214956 215031 . + . ID=gene-HMPREF3052_08000;Name=HMPREF3052_08000;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_08000 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 214956 215031 . + . ID=rna-HMPREF3052_08000;Parent=gene-HMPREF3052_08000;anticodon=(pos:214989..214991);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_08000;product=tRNA-Val GCA_001815685.1|KV821641.1 tRNAscan-SE exon 214956 215031 . + . ID=exon-HMPREF3052_08000-1;Parent=rna-HMPREF3052_08000;anticodon=(pos:214989..214991);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_08000;product=tRNA-Val GCA_001815685.1|KV821641.1 Genbank gene 215064 215140 . + . ID=gene-HMPREF3052_08005;Name=HMPREF3052_08005;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_08005 GCA_001815685.1|KV821641.1 tRNAscan-SE tRNA 215064 215140 . + . ID=rna-HMPREF3052_08005;Parent=gene-HMPREF3052_08005;anticodon=(pos:215098..215100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_08005;product=tRNA-Asp GCA_001815685.1|KV821641.1 tRNAscan-SE exon 215064 215140 . + . ID=exon-HMPREF3052_08005-1;Parent=rna-HMPREF3052_08005;anticodon=(pos:215098..215100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_08005;product=tRNA-Asp GCA_001815685.1|KV821641.1 Genbank gene 215426 216838 . - . ID=gene-HMPREF3052_08010;Name=HMPREF3052_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08010 GCA_001815685.1|KV821641.1 Protein Homology CDS 215426 216838 . - 0 ID=cds-OFO27653.1;Parent=gene-HMPREF3052_08010;Dbxref=NCBI_GP:OFO27653.1;Name=OFO27653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684520.1;locus_tag=HMPREF3052_08010;product=peptidase S13;protein_id=OFO27653.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 216909 218336 . - . ID=gene-HMPREF3052_08015;Name=HMPREF3052_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08015 GCA_001815685.1|KV821641.1 Protein Homology CDS 216909 218336 . - 0 ID=cds-OFO27654.1;Parent=gene-HMPREF3052_08015;Dbxref=NCBI_GP:OFO27654.1;Name=OFO27654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684596.1;locus_tag=HMPREF3052_08015;product=MFS transporter;protein_id=OFO27654.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 218473 219039 . + . ID=gene-HMPREF3052_08020;Name=HMPREF3052_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08020 GCA_001815685.1|KV821641.1 Protein Homology CDS 218473 219039 . + 0 ID=cds-OFO27655.1;Parent=gene-HMPREF3052_08020;Dbxref=NCBI_GP:OFO27655.1;Name=OFO27655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312712.1;locus_tag=HMPREF3052_08020;product=oxidoreductase;protein_id=OFO27655.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 219192 219869 . + . ID=gene-HMPREF3052_08025;Name=HMPREF3052_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08025 GCA_001815685.1|KV821641.1 Protein Homology CDS 219192 219869 . + 0 ID=cds-OFO27656.1;Parent=gene-HMPREF3052_08025;Dbxref=NCBI_GP:OFO27656.1;Name=OFO27656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682209.1;locus_tag=HMPREF3052_08025;product=DNA-binding response regulator;protein_id=OFO27656.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 219899 221212 . + . ID=gene-HMPREF3052_08030;Name=HMPREF3052_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08030 GCA_001815685.1|KV821641.1 Protein Homology CDS 219899 221212 . + 0 ID=cds-OFO27657.1;Parent=gene-HMPREF3052_08030;Dbxref=NCBI_GP:OFO27657.1;Name=OFO27657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684492.1;locus_tag=HMPREF3052_08030;product=two-component sensor histidine kinase;protein_id=OFO27657.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 221342 222421 . - . ID=gene-HMPREF3052_08035;Name=HMPREF3052_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08035 GCA_001815685.1|KV821641.1 Protein Homology CDS 221342 222421 . - 0 ID=cds-OFO27658.1;Parent=gene-HMPREF3052_08035;Dbxref=NCBI_GP:OFO27658.1;Name=OFO27658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582239.1;locus_tag=HMPREF3052_08035;product=3-dehydroquinate synthase;protein_id=OFO27658.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 222444 222956 . - . ID=gene-HMPREF3052_08040;Name=HMPREF3052_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08040 GCA_001815685.1|KV821641.1 Protein Homology CDS 222444 222956 . - 0 ID=cds-OFO27659.1;Parent=gene-HMPREF3052_08040;Dbxref=NCBI_GP:OFO27659.1;Name=OFO27659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752945.1;locus_tag=HMPREF3052_08040;product=shikimate kinase;protein_id=OFO27659.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 223089 225221 . - . ID=gene-HMPREF3052_08045;Name=HMPREF3052_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08045 GCA_001815685.1|KV821641.1 Protein Homology CDS 223089 225221 . - 0 ID=cds-OFO27660.1;Parent=gene-HMPREF3052_08045;Dbxref=NCBI_GP:OFO27660.1;Name=OFO27660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682217.1;locus_tag=HMPREF3052_08045;product=pilus assembly protein PilQ;protein_id=OFO27660.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 225242 225784 . - . ID=gene-HMPREF3052_08050;Name=HMPREF3052_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08050 GCA_001815685.1|KV821641.1 Protein Homology CDS 225242 225784 . - 0 ID=cds-OFO27661.1;Parent=gene-HMPREF3052_08050;Dbxref=NCBI_GP:OFO27661.1;Name=OFO27661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682218.1;locus_tag=HMPREF3052_08050;product=pilin assembly protein;protein_id=OFO27661.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 225800 226471 . - . ID=gene-HMPREF3052_08055;Name=HMPREF3052_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08055 GCA_001815685.1|KV821641.1 Protein Homology CDS 225800 226471 . - 0 ID=cds-OFO27662.1;Parent=gene-HMPREF3052_08055;Dbxref=NCBI_GP:OFO27662.1;Name=OFO27662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682219.1;locus_tag=HMPREF3052_08055;product=pilus assembly protein PilO;protein_id=OFO27662.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 226471 227094 . - . ID=gene-HMPREF3052_08060;Name=HMPREF3052_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08060 GCA_001815685.1|KV821641.1 Protein Homology CDS 226471 227094 . - 0 ID=cds-OFO27663.1;Parent=gene-HMPREF3052_08060;Dbxref=NCBI_GP:OFO27663.1;Name=OFO27663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684574.1;locus_tag=HMPREF3052_08060;product=pilus assembly protein PilP;protein_id=OFO27663.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 227099 228190 . - . ID=gene-HMPREF3052_08065;Name=HMPREF3052_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08065 GCA_001815685.1|KV821641.1 Protein Homology CDS 227099 228190 . - 0 ID=cds-OFO27664.1;Parent=gene-HMPREF3052_08065;Dbxref=NCBI_GP:OFO27664.1;Name=OFO27664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285028.1;locus_tag=HMPREF3052_08065;product=pilus assembly protein PilM;protein_id=OFO27664.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 228344 230740 . + . ID=gene-HMPREF3052_08070;Name=HMPREF3052_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08070 GCA_001815685.1|KV821641.1 Protein Homology CDS 228344 230740 . + 0 ID=cds-OFO27665.1;Parent=gene-HMPREF3052_08070;Dbxref=NCBI_GP:OFO27665.1;Name=OFO27665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237319.1;locus_tag=HMPREF3052_08070;product=peptidase;protein_id=OFO27665.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 230806 231642 . + . ID=gene-HMPREF3052_08075;Name=HMPREF3052_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08075 GCA_001815685.1|KV821641.1 Protein Homology CDS 230806 231642 . + 0 ID=cds-OFO27666.1;Parent=gene-HMPREF3052_08075;Dbxref=NCBI_GP:OFO27666.1;Name=OFO27666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270372.1;locus_tag=HMPREF3052_08075;product=phosphatase;protein_id=OFO27666.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 231715 232080 . + . ID=gene-HMPREF3052_08080;Name=HMPREF3052_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08080 GCA_001815685.1|KV821641.1 Protein Homology CDS 231715 232080 . + 0 ID=cds-OFO27667.1;Parent=gene-HMPREF3052_08080;Dbxref=NCBI_GP:OFO27667.1;Name=OFO27667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684509.1;locus_tag=HMPREF3052_08080;product=hypothetical protein;protein_id=OFO27667.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 232269 232682 . - . ID=gene-HMPREF3052_08085;Name=HMPREF3052_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08085 GCA_001815685.1|KV821641.1 Protein Homology CDS 232269 232682 . - 0 ID=cds-OFO27758.1;Parent=gene-HMPREF3052_08085;Dbxref=NCBI_GP:OFO27758.1;Name=OFO27758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271587.1;locus_tag=HMPREF3052_08085;product=hypothetical protein;protein_id=OFO27758.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 232759 233535 . - . ID=gene-HMPREF3052_08090;Name=HMPREF3052_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08090 GCA_001815685.1|KV821641.1 Protein Homology CDS 232759 233535 . - 0 ID=cds-OFO27759.1;Parent=gene-HMPREF3052_08090;Dbxref=NCBI_GP:OFO27759.1;Name=OFO27759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744217.1;locus_tag=HMPREF3052_08090;product=hypothetical protein;protein_id=OFO27759.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 233790 235004 . - . ID=gene-HMPREF3052_08095;Name=HMPREF3052_08095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08095;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 233790 235004 . - 0 ID=cds-HMPREF3052_08095;Parent=gene-HMPREF3052_08095;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682232.1;locus_tag=HMPREF3052_08095;product=MFS transporter;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 235269 236708 . - . ID=gene-HMPREF3052_08100;Name=HMPREF3052_08100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08100;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 235269 236708 . - 0 ID=cds-HMPREF3052_08100;Parent=gene-HMPREF3052_08100;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312642.1;locus_tag=HMPREF3052_08100;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 236815 237555 . - . ID=gene-HMPREF3052_08105;Name=HMPREF3052_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08105 GCA_001815685.1|KV821641.1 Protein Homology CDS 236815 237555 . - 0 ID=cds-OFO27668.1;Parent=gene-HMPREF3052_08105;Dbxref=NCBI_GP:OFO27668.1;Name=OFO27668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687226.1;locus_tag=HMPREF3052_08105;product=hypothetical protein;protein_id=OFO27668.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 237840 238682 . + . ID=gene-HMPREF3052_08110;Name=HMPREF3052_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08110 GCA_001815685.1|KV821641.1 Protein Homology CDS 237840 238682 . + 0 ID=cds-OFO27669.1;Parent=gene-HMPREF3052_08110;Dbxref=NCBI_GP:OFO27669.1;Name=OFO27669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017629283.1;locus_tag=HMPREF3052_08110;product=class II glutamine amidotransferase;protein_id=OFO27669.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 238832 239689 . - . ID=gene-HMPREF3052_08115;Name=HMPREF3052_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08115 GCA_001815685.1|KV821641.1 Protein Homology CDS 238832 239689 . - 0 ID=cds-OFO27670.1;Parent=gene-HMPREF3052_08115;Dbxref=NCBI_GP:OFO27670.1;Name=OFO27670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014086853.1;locus_tag=HMPREF3052_08115;product=cytosine methyltransferase;protein_id=OFO27670.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 239996 240478 . - . ID=gene-HMPREF3052_08120;Name=HMPREF3052_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08120 GCA_001815685.1|KV821641.1 Protein Homology CDS 239996 240478 . - 0 ID=cds-OFO27671.1;Parent=gene-HMPREF3052_08120;Dbxref=NCBI_GP:OFO27671.1;Name=OFO27671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750356.1;locus_tag=HMPREF3052_08120;product=enoyl-CoA hydratase;protein_id=OFO27671.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 240471 240848 . - . ID=gene-HMPREF3052_08125;Name=HMPREF3052_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08125 GCA_001815685.1|KV821641.1 Protein Homology CDS 240471 240848 . - 0 ID=cds-OFO27760.1;Parent=gene-HMPREF3052_08125;Dbxref=NCBI_GP:OFO27760.1;Name=OFO27760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005622410.1;locus_tag=HMPREF3052_08125;product=hypothetical protein;protein_id=OFO27760.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 241988 242173 . - . ID=gene-HMPREF3052_08130;Name=HMPREF3052_08130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08130;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 241988 242173 . - 0 ID=cds-HMPREF3052_08130;Parent=gene-HMPREF3052_08130;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002223793.1;locus_tag=HMPREF3052_08130;product=phage tail protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 242177 242740 . - . ID=gene-HMPREF3052_08135;Name=HMPREF3052_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08135 GCA_001815685.1|KV821641.1 Protein Homology CDS 242177 242740 . - 0 ID=cds-OFO27672.1;Parent=gene-HMPREF3052_08135;Dbxref=NCBI_GP:OFO27672.1;Name=OFO27672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284600.1;locus_tag=HMPREF3052_08135;product=phage tail protein;protein_id=OFO27672.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 242737 243792 . - . ID=gene-HMPREF3052_08140;Name=HMPREF3052_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08140 GCA_001815685.1|KV821641.1 Protein Homology CDS 242737 243792 . - 0 ID=cds-OFO27673.1;Parent=gene-HMPREF3052_08140;Dbxref=NCBI_GP:OFO27673.1;Name=OFO27673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284601.1;locus_tag=HMPREF3052_08140;product=phage baseplate protein;protein_id=OFO27673.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 243806 244153 . - . ID=gene-HMPREF3052_08145;Name=HMPREF3052_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08145 GCA_001815685.1|KV821641.1 Protein Homology CDS 243806 244153 . - 0 ID=cds-OFO27674.1;Parent=gene-HMPREF3052_08145;Dbxref=NCBI_GP:OFO27674.1;Name=OFO27674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219304.1;locus_tag=HMPREF3052_08145;product=hypothetical protein;protein_id=OFO27674.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 244254 244922 . - . ID=gene-HMPREF3052_08150;Name=HMPREF3052_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08150 GCA_001815685.1|KV821641.1 Protein Homology CDS 244254 244922 . - 0 ID=cds-OFO27675.1;Parent=gene-HMPREF3052_08150;Dbxref=NCBI_GP:OFO27675.1;Name=OFO27675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219305.1;locus_tag=HMPREF3052_08150;product=baseplate assembly protein;protein_id=OFO27675.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 244919 246076 . - . ID=gene-HMPREF3052_08155;Name=HMPREF3052_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08155 GCA_001815685.1|KV821641.1 Protein Homology CDS 244919 246076 . - 0 ID=cds-OFO27676.1;Parent=gene-HMPREF3052_08155;Dbxref=NCBI_GP:OFO27676.1;Name=OFO27676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284604.1;locus_tag=HMPREF3052_08155;product=phage tail protein;protein_id=OFO27676.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 246066 247397 . - . ID=gene-HMPREF3052_08160;Name=HMPREF3052_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08160 GCA_001815685.1|KV821641.1 Protein Homology CDS 246066 247397 . - 0 ID=cds-OFO27677.1;Parent=gene-HMPREF3052_08160;Dbxref=NCBI_GP:OFO27677.1;Name=OFO27677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217232.1;locus_tag=HMPREF3052_08160;product=phage morphogenesis protein;protein_id=OFO27677.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 247397 249565 . - . ID=gene-HMPREF3052_08165;Name=HMPREF3052_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08165 GCA_001815685.1|KV821641.1 Protein Homology CDS 247397 249565 . - 0 ID=cds-OFO27678.1;Parent=gene-HMPREF3052_08165;Dbxref=NCBI_GP:OFO27678.1;Name=OFO27678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284606.1;locus_tag=HMPREF3052_08165;product=PRTRC system protein F;protein_id=OFO27678.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 249642 250265 . - . ID=gene-HMPREF3052_08170;Name=HMPREF3052_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08170 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 249642 250265 . - 0 ID=cds-OFO27679.1;Parent=gene-HMPREF3052_08170;Dbxref=NCBI_GP:OFO27679.1;Name=OFO27679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08170;product=hypothetical protein;protein_id=OFO27679.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 250598 250978 . - . ID=gene-HMPREF3052_08175;Name=HMPREF3052_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08175 GCA_001815685.1|KV821641.1 Protein Homology CDS 250598 250978 . - 0 ID=cds-OFO27680.1;Parent=gene-HMPREF3052_08175;Dbxref=NCBI_GP:OFO27680.1;Name=OFO27680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250164.1;locus_tag=HMPREF3052_08175;product=hypothetical protein;protein_id=OFO27680.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 250982 251359 . - . ID=gene-HMPREF3052_08180;Name=HMPREF3052_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08180 GCA_001815685.1|KV821641.1 Protein Homology CDS 250982 251359 . - 0 ID=cds-OFO27681.1;Parent=gene-HMPREF3052_08180;Dbxref=NCBI_GP:OFO27681.1;Name=OFO27681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285290.1;locus_tag=HMPREF3052_08180;product=phage tail protein;protein_id=OFO27681.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 251424 252836 . - . ID=gene-HMPREF3052_08185;Name=HMPREF3052_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08185 GCA_001815685.1|KV821641.1 Protein Homology CDS 251424 252836 . - 0 ID=cds-OFO27682.1;Parent=gene-HMPREF3052_08185;Dbxref=NCBI_GP:OFO27682.1;Name=OFO27682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009346260.1;locus_tag=HMPREF3052_08185;product=phage tail protein;protein_id=OFO27682.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 252836 253033 . - . ID=gene-HMPREF3052_08190;Name=HMPREF3052_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08190 GCA_001815685.1|KV821641.1 Protein Homology CDS 252836 253033 . - 0 ID=cds-OFO27683.1;Parent=gene-HMPREF3052_08190;Dbxref=NCBI_GP:OFO27683.1;Name=OFO27683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225238.1;locus_tag=HMPREF3052_08190;product=hypothetical protein;protein_id=OFO27683.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 253043 253681 . - . ID=gene-HMPREF3052_08195;Name=HMPREF3052_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08195 GCA_001815685.1|KV821641.1 Protein Homology CDS 253043 253681 . - 0 ID=cds-OFO27684.1;Parent=gene-HMPREF3052_08195;Dbxref=NCBI_GP:OFO27684.1;Name=OFO27684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003789947.1;locus_tag=HMPREF3052_08195;product=hypothetical protein;protein_id=OFO27684.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 253671 254093 . - . ID=gene-HMPREF3052_08200;Name=HMPREF3052_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08200 GCA_001815685.1|KV821641.1 Protein Homology CDS 253671 254093 . - 0 ID=cds-OFO27685.1;Parent=gene-HMPREF3052_08200;Dbxref=NCBI_GP:OFO27685.1;Name=OFO27685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232422.1;locus_tag=HMPREF3052_08200;product=hypothetical protein;protein_id=OFO27685.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 254093 254491 . - . ID=gene-HMPREF3052_08205;Name=HMPREF3052_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08205 GCA_001815685.1|KV821641.1 Protein Homology CDS 254093 254491 . - 0 ID=cds-OFO27686.1;Parent=gene-HMPREF3052_08205;Dbxref=NCBI_GP:OFO27686.1;Name=OFO27686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213605.1;locus_tag=HMPREF3052_08205;product=hypothetical protein;protein_id=OFO27686.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 254555 255463 . - . ID=gene-HMPREF3052_08210;Name=HMPREF3052_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08210 GCA_001815685.1|KV821641.1 Protein Homology CDS 254555 255463 . - 0 ID=cds-OFO27687.1;Parent=gene-HMPREF3052_08210;Dbxref=NCBI_GP:OFO27687.1;Name=OFO27687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019390169.1;locus_tag=HMPREF3052_08210;product=head protein;protein_id=OFO27687.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 255463 256524 . - . ID=gene-HMPREF3052_08215;Name=HMPREF3052_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08215 GCA_001815685.1|KV821641.1 Protein Homology CDS 255463 256524 . - 0 ID=cds-OFO27688.1;Parent=gene-HMPREF3052_08215;Dbxref=NCBI_GP:OFO27688.1;Name=OFO27688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256621.1;locus_tag=HMPREF3052_08215;product=hypothetical protein;protein_id=OFO27688.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 256744 257160 . - . ID=gene-HMPREF3052_08220;Name=HMPREF3052_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08220 GCA_001815685.1|KV821641.1 Protein Homology CDS 256744 257160 . - 0 ID=cds-OFO27689.1;Parent=gene-HMPREF3052_08220;Dbxref=NCBI_GP:OFO27689.1;Name=OFO27689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652757.1;locus_tag=HMPREF3052_08220;product=virion morphogenesis protein;protein_id=OFO27689.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 257271 258560 . - . ID=gene-HMPREF3052_08225;Name=HMPREF3052_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08225 GCA_001815685.1|KV821641.1 Protein Homology CDS 257271 258560 . - 0 ID=cds-OFO27690.1;Parent=gene-HMPREF3052_08225;Dbxref=NCBI_GP:OFO27690.1;Name=OFO27690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002249358.1;locus_tag=HMPREF3052_08225;product=phage head morphogenesis protein;protein_id=OFO27690.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 258547 260115 . - . ID=gene-HMPREF3052_08230;Name=HMPREF3052_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08230 GCA_001815685.1|KV821641.1 Protein Homology CDS 258547 260115 . - 0 ID=cds-OFO27691.1;Parent=gene-HMPREF3052_08230;Dbxref=NCBI_GP:OFO27691.1;Name=OFO27691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581084.1;locus_tag=HMPREF3052_08230;product=hypothetical protein;protein_id=OFO27691.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 260115 261737 . - . ID=gene-HMPREF3052_08235;Name=HMPREF3052_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08235 GCA_001815685.1|KV821641.1 Protein Homology CDS 260115 261737 . - 0 ID=cds-OFO27761.1;Parent=gene-HMPREF3052_08235;Dbxref=NCBI_GP:OFO27761.1;Name=OFO27761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173230.1;locus_tag=HMPREF3052_08235;product=hypothetical protein;protein_id=OFO27761.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 261779 262282 . - . ID=gene-HMPREF3052_08240;Name=HMPREF3052_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08240 GCA_001815685.1|KV821641.1 Protein Homology CDS 261779 262282 . - 0 ID=cds-OFO27692.1;Parent=gene-HMPREF3052_08240;Dbxref=NCBI_GP:OFO27692.1;Name=OFO27692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272992.1;locus_tag=HMPREF3052_08240;product=DNA-binding protein;protein_id=OFO27692.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 262284 262481 . - . ID=gene-HMPREF3052_08245;Name=HMPREF3052_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08245 GCA_001815685.1|KV821641.1 Protein Homology CDS 262284 262481 . - 0 ID=cds-OFO27693.1;Parent=gene-HMPREF3052_08245;Dbxref=NCBI_GP:OFO27693.1;Name=OFO27693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272991.1;locus_tag=HMPREF3052_08245;product=hypothetical protein;protein_id=OFO27693.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 262478 262744 . - . ID=gene-HMPREF3052_08250;Name=HMPREF3052_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08250 GCA_001815685.1|KV821641.1 Protein Homology CDS 262478 262744 . - 0 ID=cds-OFO27694.1;Parent=gene-HMPREF3052_08250;Dbxref=NCBI_GP:OFO27694.1;Name=OFO27694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250135.1;locus_tag=HMPREF3052_08250;product=hypothetical protein;protein_id=OFO27694.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 262756 263085 . - . ID=gene-HMPREF3052_08255;Name=HMPREF3052_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08255 GCA_001815685.1|KV821641.1 Protein Homology CDS 262756 263085 . - 0 ID=cds-OFO27695.1;Parent=gene-HMPREF3052_08255;Dbxref=NCBI_GP:OFO27695.1;Name=OFO27695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272989.1;locus_tag=HMPREF3052_08255;product=hypothetical protein;protein_id=OFO27695.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 263082 263276 . - . ID=gene-HMPREF3052_08260;Name=HMPREF3052_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08260 GCA_001815685.1|KV821641.1 Protein Homology CDS 263082 263276 . - 0 ID=cds-OFO27696.1;Parent=gene-HMPREF3052_08260;Dbxref=NCBI_GP:OFO27696.1;Name=OFO27696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245332.1;locus_tag=HMPREF3052_08260;product=hypothetical protein;protein_id=OFO27696.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 263296 263715 . - . ID=gene-HMPREF3052_08265;Name=HMPREF3052_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08265 GCA_001815685.1|KV821641.1 Protein Homology CDS 263296 263715 . - 0 ID=cds-OFO27697.1;Parent=gene-HMPREF3052_08265;Dbxref=NCBI_GP:OFO27697.1;Name=OFO27697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215784.1;locus_tag=HMPREF3052_08265;product=hypothetical protein;protein_id=OFO27697.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 263687 263923 . - . ID=gene-HMPREF3052_08270;Name=HMPREF3052_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08270 GCA_001815685.1|KV821641.1 Protein Homology CDS 263687 263923 . - 0 ID=cds-OFO27762.1;Parent=gene-HMPREF3052_08270;Dbxref=NCBI_GP:OFO27762.1;Name=OFO27762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002236958.1;locus_tag=HMPREF3052_08270;product=hypothetical protein;protein_id=OFO27762.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 264127 264633 . - . ID=gene-HMPREF3052_08275;Name=HMPREF3052_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08275 GCA_001815685.1|KV821641.1 Protein Homology CDS 264127 264633 . - 0 ID=cds-OFO27698.1;Parent=gene-HMPREF3052_08275;Dbxref=NCBI_GP:OFO27698.1;Name=OFO27698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389007.1;locus_tag=HMPREF3052_08275;product=TIGR02594 family protein;protein_id=OFO27698.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 264775 265204 . - . ID=gene-HMPREF3052_08280;Name=HMPREF3052_08280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08280;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 264775 265204 . - 0 ID=cds-HMPREF3052_08280;Parent=gene-HMPREF3052_08280;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250891.1;locus_tag=HMPREF3052_08280;product=mor transcription activator family protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 265208 265612 . - . ID=gene-HMPREF3052_08285;Name=HMPREF3052_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08285 GCA_001815685.1|KV821641.1 Protein Homology CDS 265208 265612 . - 0 ID=cds-OFO27763.1;Parent=gene-HMPREF3052_08285;Dbxref=NCBI_GP:OFO27763.1;Name=OFO27763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245584.1;locus_tag=HMPREF3052_08285;product=hypothetical protein;protein_id=OFO27763.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 265802 266947 . - . ID=gene-HMPREF3052_08290;Name=HMPREF3052_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08290 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 265802 266947 . - 0 ID=cds-OFO27699.1;Parent=gene-HMPREF3052_08290;Dbxref=NCBI_GP:OFO27699.1;Name=OFO27699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08290;product=DNA-binding protein;protein_id=OFO27699.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 266944 267597 . - . ID=gene-HMPREF3052_08295;Name=HMPREF3052_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08295 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 266944 267597 . - 0 ID=cds-OFO27700.1;Parent=gene-HMPREF3052_08295;Dbxref=NCBI_GP:OFO27700.1;Name=OFO27700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08295;product=hypothetical protein;protein_id=OFO27700.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 267827 268345 . - . ID=gene-HMPREF3052_08300;Name=HMPREF3052_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08300 GCA_001815685.1|KV821641.1 Protein Homology CDS 267827 268345 . - 0 ID=cds-OFO27701.1;Parent=gene-HMPREF3052_08300;Dbxref=NCBI_GP:OFO27701.1;Name=OFO27701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520470.1;locus_tag=HMPREF3052_08300;product=host-nuclease inhibitor protein Gam;protein_id=OFO27701.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 268502 268747 . - . ID=gene-HMPREF3052_08305;Name=HMPREF3052_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08305 GCA_001815685.1|KV821641.1 Protein Homology CDS 268502 268747 . - 0 ID=cds-OFO27702.1;Parent=gene-HMPREF3052_08305;Dbxref=NCBI_GP:OFO27702.1;Name=OFO27702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745005.1;locus_tag=HMPREF3052_08305;product=head morphogeneis protein;protein_id=OFO27702.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 268749 269576 . - . ID=gene-HMPREF3052_08310;Name=HMPREF3052_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08310 GCA_001815685.1|KV821641.1 Protein Homology CDS 268749 269576 . - 0 ID=cds-OFO27703.1;Parent=gene-HMPREF3052_08310;Dbxref=NCBI_GP:OFO27703.1;Name=OFO27703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687335.1;locus_tag=HMPREF3052_08310;product=hypothetical protein;protein_id=OFO27703.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 269573 270001 . - . ID=gene-HMPREF3052_08315;Name=HMPREF3052_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08315 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 269573 270001 . - 0 ID=cds-OFO27704.1;Parent=gene-HMPREF3052_08315;Dbxref=NCBI_GP:OFO27704.1;Name=OFO27704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08315;product=hypothetical protein;protein_id=OFO27704.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 270012 270209 . - . ID=gene-HMPREF3052_08320;Name=HMPREF3052_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08320 GCA_001815685.1|KV821641.1 Protein Homology CDS 270012 270209 . - 0 ID=cds-OFO27705.1;Parent=gene-HMPREF3052_08320;Dbxref=NCBI_GP:OFO27705.1;Name=OFO27705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003751194.1;locus_tag=HMPREF3052_08320;product=pyrophosphate-energized proton pump;protein_id=OFO27705.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 270209 270682 . - . ID=gene-HMPREF3052_08325;Name=HMPREF3052_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08325 GCA_001815685.1|KV821641.1 GeneMarkS+ CDS 270209 270682 . - 0 ID=cds-OFO27706.1;Parent=gene-HMPREF3052_08325;Dbxref=NCBI_GP:OFO27706.1;Name=OFO27706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08325;product=hypothetical protein;protein_id=OFO27706.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 271261 271485 . - . ID=gene-HMPREF3052_08330;Name=HMPREF3052_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08330 GCA_001815685.1|KV821641.1 Protein Homology CDS 271261 271485 . - 0 ID=cds-OFO27707.1;Parent=gene-HMPREF3052_08330;Dbxref=NCBI_GP:OFO27707.1;Name=OFO27707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258571.1;locus_tag=HMPREF3052_08330;product=hypothetical protein;protein_id=OFO27707.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 271512 271754 . - . ID=gene-HMPREF3052_08335;Name=HMPREF3052_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08335 GCA_001815685.1|KV821641.1 Protein Homology CDS 271512 271754 . - 0 ID=cds-OFO27708.1;Parent=gene-HMPREF3052_08335;Dbxref=NCBI_GP:OFO27708.1;Name=OFO27708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520480.1;locus_tag=HMPREF3052_08335;product=toxin PIN;protein_id=OFO27708.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 271770 272684 . - . ID=gene-HMPREF3052_08340;Name=HMPREF3052_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08340 GCA_001815685.1|KV821641.1 Protein Homology CDS 271770 272684 . - 0 ID=cds-OFO27709.1;Parent=gene-HMPREF3052_08340;Dbxref=NCBI_GP:OFO27709.1;Name=OFO27709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241524.1;locus_tag=HMPREF3052_08340;product=XRE family transcriptional regulator;protein_id=OFO27709.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 272720 274720 . - . ID=gene-HMPREF3052_08345;Name=HMPREF3052_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08345 GCA_001815685.1|KV821641.1 Protein Homology CDS 272720 274720 . - 0 ID=cds-OFO27710.1;Parent=gene-HMPREF3052_08345;Dbxref=NCBI_GP:OFO27710.1;Name=OFO27710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002229445.1;locus_tag=HMPREF3052_08345;product=transposase;protein_id=OFO27710.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 274795 275043 . - . ID=gene-HMPREF3052_08350;Name=HMPREF3052_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08350 GCA_001815685.1|KV821641.1 Protein Homology CDS 274795 275043 . - 0 ID=cds-OFO27711.1;Parent=gene-HMPREF3052_08350;Dbxref=NCBI_GP:OFO27711.1;Name=OFO27711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642965.1;locus_tag=HMPREF3052_08350;product=DNA-binding protein;protein_id=OFO27711.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 275281 276000 . + . ID=gene-HMPREF3052_08355;Name=HMPREF3052_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08355 GCA_001815685.1|KV821641.1 Protein Homology CDS 275281 276000 . + 0 ID=cds-OFO27712.1;Parent=gene-HMPREF3052_08355;Dbxref=NCBI_GP:OFO27712.1;Name=OFO27712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219323.1;locus_tag=HMPREF3052_08355;product=repressor;protein_id=OFO27712.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 276394 276846 . + . ID=gene-HMPREF3052_08360;Name=HMPREF3052_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08360 GCA_001815685.1|KV821641.1 Protein Homology CDS 276394 276846 . + 0 ID=cds-OFO27713.1;Parent=gene-HMPREF3052_08360;Dbxref=NCBI_GP:OFO27713.1;Name=OFO27713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520863.1;locus_tag=HMPREF3052_08360;product=transcriptional regulator NrdR;protein_id=OFO27713.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 276861 277964 . + . ID=gene-HMPREF3052_08365;Name=HMPREF3052_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08365 GCA_001815685.1|KV821641.1 Protein Homology CDS 276861 277964 . + 0 ID=cds-OFO27714.1;Parent=gene-HMPREF3052_08365;Dbxref=NCBI_GP:OFO27714.1;Name=OFO27714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684609.1;locus_tag=HMPREF3052_08365;product=riboflavin biosynthesis protein RibD;protein_id=OFO27714.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 278517 279824 . + . ID=gene-HMPREF3052_08370;Name=HMPREF3052_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08370 GCA_001815685.1|KV821641.1 Protein Homology CDS 278517 279824 . + 0 ID=cds-OFO27715.1;Parent=gene-HMPREF3052_08370;Dbxref=NCBI_GP:OFO27715.1;Name=OFO27715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520865.1;locus_tag=HMPREF3052_08370;product=UDP-N-acetyl-D-glucosamine dehydrogenase;protein_id=OFO27715.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 279993 281420 . + . ID=gene-HMPREF3052_08375;Name=HMPREF3052_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08375 GCA_001815685.1|KV821641.1 Protein Homology CDS 279993 281420 . + 0 ID=cds-OFO27716.1;Parent=gene-HMPREF3052_08375;Dbxref=NCBI_GP:OFO27716.1;Name=OFO27716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682250.1;locus_tag=HMPREF3052_08375;product=hypothetical protein;protein_id=OFO27716.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 281463 282773 . + . ID=gene-HMPREF3052_08380;Name=HMPREF3052_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08380 GCA_001815685.1|KV821641.1 Protein Homology CDS 281463 282773 . + 0 ID=cds-OFO27717.1;Parent=gene-HMPREF3052_08380;Dbxref=NCBI_GP:OFO27717.1;Name=OFO27717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520867.1;locus_tag=HMPREF3052_08380;product=hypothetical protein;protein_id=OFO27717.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 282770 283840 . + . ID=gene-HMPREF3052_08385;Name=HMPREF3052_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08385 GCA_001815685.1|KV821641.1 Protein Homology CDS 282770 283840 . + 0 ID=cds-OFO27718.1;Parent=gene-HMPREF3052_08385;Dbxref=NCBI_GP:OFO27718.1;Name=OFO27718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283823.1;locus_tag=HMPREF3052_08385;product=hypothetical protein;protein_id=OFO27718.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 283854 285026 . + . ID=gene-HMPREF3052_08390;Name=HMPREF3052_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08390 GCA_001815685.1|KV821641.1 Protein Homology CDS 283854 285026 . + 0 ID=cds-OFO27719.1;Parent=gene-HMPREF3052_08390;Dbxref=NCBI_GP:OFO27719.1;Name=OFO27719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221486.1;locus_tag=HMPREF3052_08390;product=hypothetical protein;protein_id=OFO27719.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 285019 285636 . + . ID=gene-HMPREF3052_08395;Name=HMPREF3052_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08395 GCA_001815685.1|KV821641.1 Protein Homology CDS 285019 285636 . + 0 ID=cds-OFO27720.1;Parent=gene-HMPREF3052_08395;Dbxref=NCBI_GP:OFO27720.1;Name=OFO27720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684524.1;locus_tag=HMPREF3052_08395;product=sugar transferase;protein_id=OFO27720.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 285623 286597 . + . ID=gene-HMPREF3052_08400;Name=HMPREF3052_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08400 GCA_001815685.1|KV821641.1 Protein Homology CDS 285623 286597 . + 0 ID=cds-OFO27721.1;Parent=gene-HMPREF3052_08400;Dbxref=NCBI_GP:OFO27721.1;Name=OFO27721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520871.1;locus_tag=HMPREF3052_08400;product=carbamoyl phosphate synthase large subunit;protein_id=OFO27721.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 286590 287282 . + . ID=gene-HMPREF3052_08405;Name=HMPREF3052_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08405 GCA_001815685.1|KV821641.1 Protein Homology CDS 286590 287282 . + 0 ID=cds-OFO27722.1;Parent=gene-HMPREF3052_08405;Dbxref=NCBI_GP:OFO27722.1;Name=OFO27722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684593.1;locus_tag=HMPREF3052_08405;product=haloacid dehalogenase;protein_id=OFO27722.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 287296 288075 . + . ID=gene-HMPREF3052_08410;Name=HMPREF3052_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08410 GCA_001815685.1|KV821641.1 Protein Homology CDS 287296 288075 . + 0 ID=cds-OFO27723.1;Parent=gene-HMPREF3052_08410;Dbxref=NCBI_GP:OFO27723.1;Name=OFO27723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748995.1;locus_tag=HMPREF3052_08410;product=formyl transferase;protein_id=OFO27723.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 288068 289243 . + . ID=gene-HMPREF3052_08415;Name=HMPREF3052_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08415 GCA_001815685.1|KV821641.1 Protein Homology CDS 288068 289243 . + 0 ID=cds-OFO27724.1;Parent=gene-HMPREF3052_08415;Dbxref=NCBI_GP:OFO27724.1;Name=OFO27724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687196.1;locus_tag=HMPREF3052_08415;product=aminotransferase;protein_id=OFO27724.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 289353 291254 . + . ID=gene-HMPREF3052_08420;Name=HMPREF3052_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08420 GCA_001815685.1|KV821641.1 Protein Homology CDS 289353 291254 . + 0 ID=cds-OFO27725.1;Parent=gene-HMPREF3052_08420;Dbxref=NCBI_GP:OFO27725.1;Name=OFO27725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684572.1;locus_tag=HMPREF3052_08420;product=nucleoside-diphosphate sugar epimerase;protein_id=OFO27725.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 291298 292425 . + . ID=gene-HMPREF3052_08425;Name=HMPREF3052_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08425 GCA_001815685.1|KV821641.1 Protein Homology CDS 291298 292425 . + 0 ID=cds-OFO27726.1;Parent=gene-HMPREF3052_08425;Dbxref=NCBI_GP:OFO27726.1;Name=OFO27726.1;Note=required for the translocation of capsular polysaccharide through the outer membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749002.1;locus_tag=HMPREF3052_08425;product=polysaccharide export protein Wza;protein_id=OFO27726.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 292597 293046 . + . ID=gene-HMPREF3052_08430;Name=HMPREF3052_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08430 GCA_001815685.1|KV821641.1 Protein Homology CDS 292597 293046 . + 0 ID=cds-OFO27727.1;Parent=gene-HMPREF3052_08430;Dbxref=NCBI_GP:OFO27727.1;Name=OFO27727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520878.1;locus_tag=HMPREF3052_08430;product=phosphotyrosine protein phosphatase;protein_id=OFO27727.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 293073 295232 . + . ID=gene-HMPREF3052_08435;Name=HMPREF3052_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08435 GCA_001815685.1|KV821641.1 Protein Homology CDS 293073 295232 . + 0 ID=cds-OFO27728.1;Parent=gene-HMPREF3052_08435;Dbxref=NCBI_GP:OFO27728.1;Name=OFO27728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684503.1;locus_tag=HMPREF3052_08435;product=tyrosine protein kinase;protein_id=OFO27728.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 295368 296357 . + . ID=gene-HMPREF3052_08440;Name=HMPREF3052_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08440 GCA_001815685.1|KV821641.1 Protein Homology CDS 295368 296357 . + 0 ID=cds-OFO27729.1;Parent=gene-HMPREF3052_08440;Dbxref=NCBI_GP:OFO27729.1;Name=OFO27729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686481.1;locus_tag=HMPREF3052_08440;product=glycerol-3-phosphate dehydrogenase;protein_id=OFO27729.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 296432 296755 . + . ID=gene-HMPREF3052_08445;Name=HMPREF3052_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08445 GCA_001815685.1|KV821641.1 Protein Homology CDS 296432 296755 . + 0 ID=cds-OFO27730.1;Parent=gene-HMPREF3052_08445;Dbxref=NCBI_GP:OFO27730.1;Name=OFO27730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233231.1;locus_tag=HMPREF3052_08445;product=hypothetical protein;protein_id=OFO27730.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 296767 297069 . + . ID=gene-HMPREF3052_08450;Name=HMPREF3052_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08450 GCA_001815685.1|KV821641.1 Protein Homology CDS 296767 297069 . + 0 ID=cds-OFO27731.1;Parent=gene-HMPREF3052_08450;Dbxref=NCBI_GP:OFO27731.1;Name=OFO27731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681511.1;locus_tag=HMPREF3052_08450;product=cell division protein ZapA;protein_id=OFO27731.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 297078 297258 . + . ID=gene-HMPREF3052_08455;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=HMPREF3052_08455 GCA_001815685.1|KV821641.1 cmsearch ncRNA 297078 297258 . + . ID=rna-HMPREF3052_08455;Parent=gene-HMPREF3052_08455;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_08455;product=6S RNA GCA_001815685.1|KV821641.1 cmsearch exon 297078 297258 . + . ID=exon-HMPREF3052_08455-1;Parent=rna-HMPREF3052_08455;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_08455;product=6S RNA GCA_001815685.1|KV821641.1 Genbank gene 297437 297868 . + . ID=gene-HMPREF3052_08460;Name=HMPREF3052_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08460 GCA_001815685.1|KV821641.1 Protein Homology CDS 297437 297868 . + 0 ID=cds-OFO27732.1;Parent=gene-HMPREF3052_08460;Dbxref=NCBI_GP:OFO27732.1;Name=OFO27732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343693.1;locus_tag=HMPREF3052_08460;product=50S ribosomal protein L13;protein_id=OFO27732.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 297881 298273 . + . ID=gene-HMPREF3052_08465;Name=HMPREF3052_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08465 GCA_001815685.1|KV821641.1 Protein Homology CDS 297881 298273 . + 0 ID=cds-OFO27733.1;Parent=gene-HMPREF3052_08465;Dbxref=NCBI_GP:OFO27733.1;Name=OFO27733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958115.1;locus_tag=HMPREF3052_08465;product=30S ribosomal protein S9;protein_id=OFO27733.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 298361 298867 . + . ID=gene-HMPREF3052_08470;Name=HMPREF3052_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08470 GCA_001815685.1|KV821641.1 Protein Homology CDS 298361 298867 . + 0 ID=cds-OFO27734.1;Parent=gene-HMPREF3052_08470;Dbxref=NCBI_GP:OFO27734.1;Name=OFO27734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684522.1;locus_tag=HMPREF3052_08470;product=thioredoxin;protein_id=OFO27734.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 299206 299643 . + . ID=gene-HMPREF3052_08475;Name=HMPREF3052_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08475 GCA_001815685.1|KV821641.1 Protein Homology CDS 299206 299643 . + 0 ID=cds-OFO27735.1;Parent=gene-HMPREF3052_08475;Dbxref=NCBI_GP:OFO27735.1;Name=OFO27735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684610.1;locus_tag=HMPREF3052_08475;product=transcriptional regulator;protein_id=OFO27735.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 299654 300154 . + . ID=gene-HMPREF3052_08480;Name=HMPREF3052_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08480 GCA_001815685.1|KV821641.1 Protein Homology CDS 299654 300154 . + 0 ID=cds-OFO27736.1;Parent=gene-HMPREF3052_08480;Dbxref=NCBI_GP:OFO27736.1;Name=OFO27736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757120.1;locus_tag=HMPREF3052_08480;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=OFO27736.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 300240 300935 . + . ID=gene-HMPREF3052_08485;Name=HMPREF3052_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08485 GCA_001815685.1|KV821641.1 Protein Homology CDS 300240 300935 . + 0 ID=cds-OFO27737.1;Parent=gene-HMPREF3052_08485;Dbxref=NCBI_GP:OFO27737.1;Name=OFO27737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285640.1;locus_tag=HMPREF3052_08485;product=mannose-1-phosphate guanylyltransferase;protein_id=OFO27737.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 301029 301931 . - . ID=gene-HMPREF3052_08490;Name=HMPREF3052_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08490 GCA_001815685.1|KV821641.1 Protein Homology CDS 301029 301931 . - 0 ID=cds-OFO27738.1;Parent=gene-HMPREF3052_08490;Dbxref=NCBI_GP:OFO27738.1;Name=OFO27738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684496.1;locus_tag=HMPREF3052_08490;product=protein RarD;protein_id=OFO27738.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 301971 303041 . - . ID=gene-HMPREF3052_08495;Name=HMPREF3052_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08495 GCA_001815685.1|KV821641.1 Protein Homology CDS 301971 303041 . - 0 ID=cds-OFO27739.1;Parent=gene-HMPREF3052_08495;Dbxref=NCBI_GP:OFO27739.1;Name=OFO27739.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681528.1;locus_tag=HMPREF3052_08495;product=N(6)-L-threonylcarbamoyladenine synthase TsaD;protein_id=OFO27739.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 303081 304268 . - . ID=gene-HMPREF3052_08500;Name=HMPREF3052_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08500 GCA_001815685.1|KV821641.1 Protein Homology CDS 303081 304268 . - 0 ID=cds-OFO27740.1;Parent=gene-HMPREF3052_08500;Dbxref=NCBI_GP:OFO27740.1;Name=OFO27740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750256.1;locus_tag=HMPREF3052_08500;product=c-type cytochrome biogenesis protein CcsB;protein_id=OFO27740.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 304261 306213 . - . ID=gene-HMPREF3052_08505;Name=HMPREF3052_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08505 GCA_001815685.1|KV821641.1 Protein Homology CDS 304261 306213 . - 0 ID=cds-OFO27741.1;Parent=gene-HMPREF3052_08505;Dbxref=NCBI_GP:OFO27741.1;Name=OFO27741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235152.1;locus_tag=HMPREF3052_08505;product=cytochrome C biogenesis protein;protein_id=OFO27741.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 306481 307104 . - . ID=gene-HMPREF3052_08510;Name=HMPREF3052_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08510 GCA_001815685.1|KV821641.1 Protein Homology CDS 306481 307104 . - 0 ID=cds-OFO27742.1;Parent=gene-HMPREF3052_08510;Dbxref=NCBI_GP:OFO27742.1;Name=OFO27742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712573.1;locus_tag=HMPREF3052_08510;product=cytochrome C;protein_id=OFO27742.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 307320 307961 . + . ID=gene-HMPREF3052_08515;Name=HMPREF3052_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08515 GCA_001815685.1|KV821641.1 Protein Homology CDS 307320 307961 . + 0 ID=cds-OFO27743.1;Parent=gene-HMPREF3052_08515;Dbxref=NCBI_GP:OFO27743.1;Name=OFO27743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749033.1;locus_tag=HMPREF3052_08515;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=OFO27743.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 308266 308775 . + . ID=gene-HMPREF3052_08520;Name=HMPREF3052_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08520 GCA_001815685.1|KV821641.1 Protein Homology CDS 308266 308775 . + 0 ID=cds-OFO27764.1;Parent=gene-HMPREF3052_08520;Dbxref=NCBI_GP:OFO27764.1;Name=OFO27764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520894.1;locus_tag=HMPREF3052_08520;product=peptidase;protein_id=OFO27764.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 308876 309094 . - . ID=gene-HMPREF3052_08525;Name=HMPREF3052_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08525 GCA_001815685.1|KV821641.1 Protein Homology CDS 308876 309094 . - 0 ID=cds-OFO27744.1;Parent=gene-HMPREF3052_08525;Dbxref=NCBI_GP:OFO27744.1;Name=OFO27744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681542.1;locus_tag=HMPREF3052_08525;product=hypothetical protein;protein_id=OFO27744.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 309072 309305 . - . ID=gene-HMPREF3052_08530;Name=HMPREF3052_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08530 GCA_001815685.1|KV821641.1 Protein Homology CDS 309072 309305 . - 0 ID=cds-OFO27745.1;Parent=gene-HMPREF3052_08530;Dbxref=NCBI_GP:OFO27745.1;Name=OFO27745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582378.1;locus_tag=HMPREF3052_08530;product=RNA-binding protein;protein_id=OFO27745.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 309471 312905 . + . ID=gene-HMPREF3052_08535;Name=HMPREF3052_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08535 GCA_001815685.1|KV821641.1 Protein Homology CDS 309471 312905 . + 0 ID=cds-OFO27765.1;Parent=gene-HMPREF3052_08535;Dbxref=NCBI_GP:OFO27765.1;Name=OFO27765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017628914.1;locus_tag=HMPREF3052_08535;product=DNA polymerase III subunit alpha;protein_id=OFO27765.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 313196 313531 . - . ID=gene-HMPREF3052_08540;Name=HMPREF3052_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08540 GCA_001815685.1|KV821641.1 Protein Homology CDS 313196 313531 . - 0 ID=cds-OFO27746.1;Parent=gene-HMPREF3052_08540;Dbxref=NCBI_GP:OFO27746.1;Name=OFO27746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684489.1;locus_tag=HMPREF3052_08540;product=hypothetical protein;protein_id=OFO27746.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 313822 314316 . + . ID=gene-HMPREF3052_08545;Name=HMPREF3052_08545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08545;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 313822 314316 . + 0 ID=cds-HMPREF3052_08545;Parent=gene-HMPREF3052_08545;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520899.1;locus_tag=HMPREF3052_08545;product=restriction endonuclease;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 314338 315189 . + . ID=gene-HMPREF3052_08550;Name=HMPREF3052_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08550 GCA_001815685.1|KV821641.1 Protein Homology CDS 314338 315189 . + 0 ID=cds-OFO27747.1;Parent=gene-HMPREF3052_08550;Dbxref=NCBI_GP:OFO27747.1;Name=OFO27747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520900.1;locus_tag=HMPREF3052_08550;product=hypothetical protein;protein_id=OFO27747.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 315259 316125 . + . ID=gene-HMPREF3052_08555;Name=HMPREF3052_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08555 GCA_001815685.1|KV821641.1 Protein Homology CDS 315259 316125 . + 0 ID=cds-OFO27748.1;Parent=gene-HMPREF3052_08555;Dbxref=NCBI_GP:OFO27748.1;Name=OFO27748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757139.1;locus_tag=HMPREF3052_08555;product=hypothetical protein;protein_id=OFO27748.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 316247 318283 . + . ID=gene-HMPREF3052_08560;Name=HMPREF3052_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08560 GCA_001815685.1|KV821641.1 Protein Homology CDS 316247 318283 . + 0 ID=cds-OFO27749.1;Parent=gene-HMPREF3052_08560;Dbxref=NCBI_GP:OFO27749.1;Name=OFO27749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270417.1;locus_tag=HMPREF3052_08560;product=oligopeptidase A;protein_id=OFO27749.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 318642 318905 . - . ID=gene-HMPREF3052_08565;Name=HMPREF3052_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08565 GCA_001815685.1|KV821641.1 Protein Homology CDS 318642 318905 . - 0 ID=cds-OFO27750.1;Parent=gene-HMPREF3052_08565;Dbxref=NCBI_GP:OFO27750.1;Name=OFO27750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684611.1;locus_tag=HMPREF3052_08565;product=hypothetical protein;protein_id=OFO27750.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 319140 319559 . + . ID=gene-HMPREF3052_08570;Name=HMPREF3052_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08570 GCA_001815685.1|KV821641.1 Protein Homology CDS 319140 319559 . + 0 ID=cds-OFO27751.1;Parent=gene-HMPREF3052_08570;Dbxref=NCBI_GP:OFO27751.1;Name=OFO27751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520906.1;locus_tag=HMPREF3052_08570;product=hypothetical protein;protein_id=OFO27751.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 319598 320068 . + . ID=gene-HMPREF3052_08575;Name=HMPREF3052_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08575 GCA_001815685.1|KV821641.1 Protein Homology CDS 319598 320068 . + 0 ID=cds-OFO27752.1;Parent=gene-HMPREF3052_08575;Dbxref=NCBI_GP:OFO27752.1;Name=OFO27752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749055.1;locus_tag=HMPREF3052_08575;product=adenylate cyclase;protein_id=OFO27752.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 320226 320954 . - . ID=gene-HMPREF3052_08580;Name=HMPREF3052_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08580 GCA_001815685.1|KV821641.1 Protein Homology CDS 320226 320954 . - 0 ID=cds-OFO27753.1;Parent=gene-HMPREF3052_08580;Dbxref=NCBI_GP:OFO27753.1;Name=OFO27753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677303.1;locus_tag=HMPREF3052_08580;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=OFO27753.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 321257 321745 . - . ID=gene-HMPREF3052_08585;Name=HMPREF3052_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08585;partial=true;start_range=.,321257 GCA_001815685.1|KV821641.1 Protein Homology CDS 321257 321745 . - 0 ID=cds-OFO27460.1;Parent=gene-HMPREF3052_08585;Dbxref=NCBI_GP:OFO27460.1;Name=OFO27460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749061.1;locus_tag=HMPREF3052_08585;partial=true;product=cytochrome C;protein_id=OFO27460.1;start_range=.,321257;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 322211 322483 . - . ID=gene-HMPREF3052_08590;Name=HMPREF3052_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08590 GCA_001815685.1|KV821641.1 Protein Homology CDS 322211 322483 . - 0 ID=cds-OFO27461.1;Parent=gene-HMPREF3052_08590;Dbxref=NCBI_GP:OFO27461.1;Name=OFO27461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682838.1;locus_tag=HMPREF3052_08590;product=hypothetical protein;protein_id=OFO27461.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 322480 323370 . - . ID=gene-HMPREF3052_08595;Name=HMPREF3052_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08595 GCA_001815685.1|KV821641.1 Protein Homology CDS 322480 323370 . - 0 ID=cds-OFO27462.1;Parent=gene-HMPREF3052_08595;Dbxref=NCBI_GP:OFO27462.1;Name=OFO27462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520915.1;locus_tag=HMPREF3052_08595;product=LysR family transcriptional regulator;protein_id=OFO27462.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 323490 324146 . + . ID=gene-HMPREF3052_08600;Name=HMPREF3052_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08600 GCA_001815685.1|KV821641.1 Protein Homology CDS 323490 324146 . + 0 ID=cds-OFO27463.1;Parent=gene-HMPREF3052_08600;Dbxref=NCBI_GP:OFO27463.1;Name=OFO27463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682835.1;locus_tag=HMPREF3052_08600;product=histidine kinase;protein_id=OFO27463.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 324238 325602 . + . ID=gene-HMPREF3052_08605;Name=HMPREF3052_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08605 GCA_001815685.1|KV821641.1 Protein Homology CDS 324238 325602 . + 0 ID=cds-OFO27464.1;Parent=gene-HMPREF3052_08605;Dbxref=NCBI_GP:OFO27464.1;Name=OFO27464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779690.1;locus_tag=HMPREF3052_08605;product=tRNA modification GTPase;protein_id=OFO27464.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 326630 328432 . + . ID=gene-HMPREF3052_08610;Name=HMPREF3052_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08610 GCA_001815685.1|KV821641.1 Protein Homology CDS 326630 328432 . + 0 ID=cds-OFO27465.1;Parent=gene-HMPREF3052_08610;Dbxref=NCBI_GP:OFO27465.1;Name=OFO27465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684179.1;locus_tag=HMPREF3052_08610;product=recombinase RmuC;protein_id=OFO27465.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 328471 329265 . + . ID=gene-HMPREF3052_08615;Name=HMPREF3052_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08615 GCA_001815685.1|KV821641.1 Protein Homology CDS 328471 329265 . + 0 ID=cds-OFO27466.1;Parent=gene-HMPREF3052_08615;Dbxref=NCBI_GP:OFO27466.1;Name=OFO27466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749074.1;locus_tag=HMPREF3052_08615;product=glycosyl transferase family 8;protein_id=OFO27466.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 329458 330279 . - . ID=gene-HMPREF3052_08620;Name=HMPREF3052_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08620 GCA_001815685.1|KV821641.1 Protein Homology CDS 329458 330279 . - 0 ID=cds-OFO27467.1;Parent=gene-HMPREF3052_08620;Dbxref=NCBI_GP:OFO27467.1;Name=OFO27467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341216.1;locus_tag=HMPREF3052_08620;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=OFO27467.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 330542 331288 . - . ID=gene-HMPREF3052_08625;Name=HMPREF3052_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08625 GCA_001815685.1|KV821641.1 Protein Homology CDS 330542 331288 . - 0 ID=cds-OFO27488.1;Parent=gene-HMPREF3052_08625;Dbxref=NCBI_GP:OFO27488.1;Name=OFO27488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684214.1;locus_tag=HMPREF3052_08625;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=OFO27488.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 331366 331800 . - . ID=gene-HMPREF3052_08630;Name=HMPREF3052_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08630 GCA_001815685.1|KV821641.1 Protein Homology CDS 331366 331800 . - 0 ID=cds-OFO27468.1;Parent=gene-HMPREF3052_08630;Dbxref=NCBI_GP:OFO27468.1;Name=OFO27468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684218.1;locus_tag=HMPREF3052_08630;product=transcriptional repressor;protein_id=OFO27468.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 332015 332410 . + . ID=gene-HMPREF3052_08635;Name=HMPREF3052_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08635 GCA_001815685.1|KV821641.1 Protein Homology CDS 332015 332410 . + 0 ID=cds-OFO27489.1;Parent=gene-HMPREF3052_08635;Dbxref=NCBI_GP:OFO27489.1;Name=OFO27489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682810.1;locus_tag=HMPREF3052_08635;product=outer membrane assembly protein BamE;protein_id=OFO27489.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 332420 333229 . + . ID=gene-HMPREF3052_08640;Name=HMPREF3052_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08640 GCA_001815685.1|KV821641.1 Protein Homology CDS 332420 333229 . + 0 ID=cds-OFO27469.1;Parent=gene-HMPREF3052_08640;Dbxref=NCBI_GP:OFO27469.1;Name=OFO27469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713191.1;locus_tag=HMPREF3052_08640;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=OFO27469.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 333319 334206 . + . ID=gene-HMPREF3052_08645;Name=HMPREF3052_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08645 GCA_001815685.1|KV821641.1 Protein Homology CDS 333319 334206 . + 0 ID=cds-OFO27470.1;Parent=gene-HMPREF3052_08645;Dbxref=NCBI_GP:OFO27470.1;Name=OFO27470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684134.1;locus_tag=HMPREF3052_08645;product=ribosomal protein L11 methyltransferase;protein_id=OFO27470.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 334401 336791 . + . ID=gene-HMPREF3052_08650;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF3052_08650 GCA_001815685.1|KV821641.1 Protein Homology CDS 334401 336791 . + 0 ID=cds-OFO27471.1;Parent=gene-HMPREF3052_08650;Dbxref=NCBI_GP:OFO27471.1;Name=OFO27471.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313090.1;locus_tag=HMPREF3052_08650;product=DNA gyrase subunit B;protein_id=OFO27471.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 337003 338031 . - . ID=gene-HMPREF3052_08655;Name=HMPREF3052_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08655 GCA_001815685.1|KV821641.1 Protein Homology CDS 337003 338031 . - 0 ID=cds-OFO27472.1;Parent=gene-HMPREF3052_08655;Dbxref=NCBI_GP:OFO27472.1;Name=OFO27472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520993.1;locus_tag=HMPREF3052_08655;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=OFO27472.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 338388 338846 . + . ID=gene-HMPREF3052_08660;Name=HMPREF3052_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08660 GCA_001815685.1|KV821641.1 Protein Homology CDS 338388 338846 . + 0 ID=cds-OFO27473.1;Parent=gene-HMPREF3052_08660;Dbxref=NCBI_GP:OFO27473.1;Name=OFO27473.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283836.1;locus_tag=HMPREF3052_08660;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=OFO27473.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 338918 339109 . + . ID=gene-HMPREF3052_08665;Name=HMPREF3052_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08665 GCA_001815685.1|KV821641.1 Protein Homology CDS 338918 339109 . + 0 ID=cds-OFO27474.1;Parent=gene-HMPREF3052_08665;Dbxref=NCBI_GP:OFO27474.1;Name=OFO27474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688245.1;locus_tag=HMPREF3052_08665;product=hypothetical protein;protein_id=OFO27474.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 339139 340500 . + . ID=gene-HMPREF3052_08670;Name=HMPREF3052_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08670 GCA_001815685.1|KV821641.1 Protein Homology CDS 339139 340500 . + 0 ID=cds-OFO27475.1;Parent=gene-HMPREF3052_08670;Dbxref=NCBI_GP:OFO27475.1;Name=OFO27475.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687264.1;locus_tag=HMPREF3052_08670;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=OFO27475.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 340805 342319 . + . ID=gene-HMPREF3052_08675;Name=HMPREF3052_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08675 GCA_001815685.1|KV821641.1 Protein Homology CDS 340805 342319 . + 0 ID=cds-OFO27476.1;Parent=gene-HMPREF3052_08675;Dbxref=NCBI_GP:OFO27476.1;Name=OFO27476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221625.1;locus_tag=HMPREF3052_08675;product=catalase;protein_id=OFO27476.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 342621 344255 . - . ID=gene-HMPREF3052_08680;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=HMPREF3052_08680 GCA_001815685.1|KV821641.1 Protein Homology CDS 342621 344255 . - 0 ID=cds-OFO27477.1;Parent=gene-HMPREF3052_08680;Dbxref=NCBI_GP:OFO27477.1;Name=OFO27477.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271863.1;locus_tag=HMPREF3052_08680;product=molecular chaperone GroEL;protein_id=OFO27477.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 344354 344641 . - . ID=gene-HMPREF3052_08685;Name=HMPREF3052_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08685 GCA_001815685.1|KV821641.1 Protein Homology CDS 344354 344641 . - 0 ID=cds-OFO27478.1;Parent=gene-HMPREF3052_08685;Dbxref=NCBI_GP:OFO27478.1;Name=OFO27478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270883.1;locus_tag=HMPREF3052_08685;product=co-chaperone GroES;protein_id=OFO27478.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 345057 347129 . + . ID=gene-HMPREF3052_08690;Name=HMPREF3052_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08690 GCA_001815685.1|KV821641.1 Protein Homology CDS 345057 347129 . + 0 ID=cds-OFO27479.1;Parent=gene-HMPREF3052_08690;Dbxref=NCBI_GP:OFO27479.1;Name=OFO27479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250397.1;locus_tag=HMPREF3052_08690;product=TonB-dependent siderophore receptor;protein_id=OFO27479.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 347245 348207 . + . ID=gene-HMPREF3052_08695;Name=HMPREF3052_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08695 GCA_001815685.1|KV821641.1 Protein Homology CDS 347245 348207 . + 0 ID=cds-OFO27480.1;Parent=gene-HMPREF3052_08695;Dbxref=NCBI_GP:OFO27480.1;Name=OFO27480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271861.1;locus_tag=HMPREF3052_08695;product=iron ABC transporter substrate-binding protein;protein_id=OFO27480.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 348438 349406 . + . ID=gene-HMPREF3052_08700;Name=HMPREF3052_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08700 GCA_001815685.1|KV821641.1 Protein Homology CDS 348438 349406 . + 0 ID=cds-OFO27481.1;Parent=gene-HMPREF3052_08700;Dbxref=NCBI_GP:OFO27481.1;Name=OFO27481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201296.1;locus_tag=HMPREF3052_08700;product=iron ABC transporter permease;protein_id=OFO27481.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 349396 350367 . + . ID=gene-HMPREF3052_08705;Name=HMPREF3052_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08705 GCA_001815685.1|KV821641.1 Protein Homology CDS 349396 350367 . + 0 ID=cds-OFO27482.1;Parent=gene-HMPREF3052_08705;Dbxref=NCBI_GP:OFO27482.1;Name=OFO27482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582295.1;locus_tag=HMPREF3052_08705;product=iron ABC transporter permease;protein_id=OFO27482.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 350456 351082 . + . ID=gene-HMPREF3052_08710;Name=HMPREF3052_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08710 GCA_001815685.1|KV821641.1 Protein Homology CDS 350456 351082 . + 0 ID=cds-OFO27483.1;Parent=gene-HMPREF3052_08710;Dbxref=NCBI_GP:OFO27483.1;Name=OFO27483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271858.1;locus_tag=HMPREF3052_08710;product=hypothetical protein;protein_id=OFO27483.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 351166 351924 . + . ID=gene-HMPREF3052_08715;Name=HMPREF3052_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08715 GCA_001815685.1|KV821641.1 Protein Homology CDS 351166 351924 . + 0 ID=cds-OFO27484.1;Parent=gene-HMPREF3052_08715;Dbxref=NCBI_GP:OFO27484.1;Name=OFO27484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678423.1;locus_tag=HMPREF3052_08715;product=iron ABC transporter ATP-binding protein;protein_id=OFO27484.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 351993 353285 . - . ID=gene-HMPREF3052_08720;Name=HMPREF3052_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08720 GCA_001815685.1|KV821641.1 Protein Homology CDS 351993 353285 . - 0 ID=cds-OFO27485.1;Parent=gene-HMPREF3052_08720;Dbxref=NCBI_GP:OFO27485.1;Name=OFO27485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684222.1;locus_tag=HMPREF3052_08720;product=valine--pyruvate transaminase;protein_id=OFO27485.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank pseudogene 353451 353648 . - . ID=gene-HMPREF3052_08725;Name=HMPREF3052_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08725;pseudo=true GCA_001815685.1|KV821641.1 Protein Homology CDS 353451 353648 . - 0 ID=cds-HMPREF3052_08725;Parent=gene-HMPREF3052_08725;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684204.1;locus_tag=HMPREF3052_08725;product=lytic enzyme;pseudo=true;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 353746 354174 . - . ID=gene-HMPREF3052_08730;Name=HMPREF3052_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08730 GCA_001815685.1|KV821641.1 Protein Homology CDS 353746 354174 . - 0 ID=cds-OFO27486.1;Parent=gene-HMPREF3052_08730;Dbxref=NCBI_GP:OFO27486.1;Name=OFO27486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173936.1;locus_tag=HMPREF3052_08730;product=hypothetical protein;protein_id=OFO27486.1;transl_table=11 GCA_001815685.1|KV821641.1 Genbank gene 354305 354724 . - . ID=gene-HMPREF3052_08735;Name=HMPREF3052_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08735 GCA_001815685.1|KV821641.1 Protein Homology CDS 354305 354724 . - 0 ID=cds-OFO27487.1;Parent=gene-HMPREF3052_08735;Dbxref=NCBI_GP:OFO27487.1;Name=OFO27487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684195.1;locus_tag=HMPREF3052_08735;product=hypothetical protein;protein_id=OFO27487.1;transl_table=11 ##sequence-region KV821642.1 1 38390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821642.1 Genbank region 1 38390 . + . ID=KV821642.1:1..38390;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821642.1 Genbank pseudogene 1 343 . + . ID=gene-HMPREF3052_08740;Name=HMPREF3052_08740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08740;pseudo=true GCA_001815685.1|KV821642.1 GeneMarkS+ CDS 1 343 . + 1 ID=cds-HMPREF3052_08740;Parent=gene-HMPREF3052_08740;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08740;product=phage head morphogenesis protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 609 797 . + . ID=gene-HMPREF3052_08745;Name=HMPREF3052_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08745 GCA_001815685.1|KV821642.1 Protein Homology CDS 609 797 . + 0 ID=cds-OFO27409.1;Parent=gene-HMPREF3052_08745;Dbxref=NCBI_GP:OFO27409.1;Name=OFO27409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003691445.1;locus_tag=HMPREF3052_08745;product=hypothetical protein;protein_id=OFO27409.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 968 1153 . - . ID=gene-HMPREF3052_08750;Name=HMPREF3052_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08750 GCA_001815685.1|KV821642.1 Protein Homology CDS 968 1153 . - 0 ID=cds-OFO27410.1;Parent=gene-HMPREF3052_08750;Dbxref=NCBI_GP:OFO27410.1;Name=OFO27410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015649348.1;locus_tag=HMPREF3052_08750;product=hypothetical protein;protein_id=OFO27410.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 1215 2396 . + . ID=gene-HMPREF3052_08755;Name=HMPREF3052_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08755 GCA_001815685.1|KV821642.1 GeneMarkS+ CDS 1215 2396 . + 0 ID=cds-OFO27411.1;Parent=gene-HMPREF3052_08755;Dbxref=NCBI_GP:OFO27411.1;Name=OFO27411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08755;product=hypothetical protein;protein_id=OFO27411.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 2452 3300 . + . ID=gene-HMPREF3052_08760;Name=HMPREF3052_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08760 GCA_001815685.1|KV821642.1 GeneMarkS+ CDS 2452 3300 . + 0 ID=cds-OFO27412.1;Parent=gene-HMPREF3052_08760;Dbxref=NCBI_GP:OFO27412.1;Name=OFO27412.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_08760;product=hypothetical protein;protein_id=OFO27412.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank pseudogene 3743 4126 . + . ID=gene-HMPREF3052_08765;Name=HMPREF3052_08765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08765;pseudo=true GCA_001815685.1|KV821642.1 Protein Homology CDS 3743 4126 . + 0 ID=cds-HMPREF3052_08765;Parent=gene-HMPREF3052_08765;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357588.1;locus_tag=HMPREF3052_08765;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 4276 5184 . - . ID=gene-HMPREF3052_08770;Name=HMPREF3052_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08770 GCA_001815685.1|KV821642.1 Protein Homology CDS 4276 5184 . - 0 ID=cds-OFO27413.1;Parent=gene-HMPREF3052_08770;Dbxref=NCBI_GP:OFO27413.1;Name=OFO27413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682417.1;locus_tag=HMPREF3052_08770;product=peroxidase;protein_id=OFO27413.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 5288 6376 . + . ID=gene-HMPREF3052_08775;Name=HMPREF3052_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08775 GCA_001815685.1|KV821642.1 Protein Homology CDS 5288 6376 . + 0 ID=cds-OFO27414.1;Parent=gene-HMPREF3052_08775;Dbxref=NCBI_GP:OFO27414.1;Name=OFO27414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682419.1;locus_tag=HMPREF3052_08775;product=metallophosphoesterase;protein_id=OFO27414.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 6516 7106 . + . ID=gene-HMPREF3052_08780;Name=HMPREF3052_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08780 GCA_001815685.1|KV821642.1 Protein Homology CDS 6516 7106 . + 0 ID=cds-OFO27415.1;Parent=gene-HMPREF3052_08780;Dbxref=NCBI_GP:OFO27415.1;Name=OFO27415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684986.1;locus_tag=HMPREF3052_08780;product=hypothetical protein;protein_id=OFO27415.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 7215 8327 . - . ID=gene-HMPREF3052_08785;Name=HMPREF3052_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08785 GCA_001815685.1|KV821642.1 Protein Homology CDS 7215 8327 . - 0 ID=cds-OFO27416.1;Parent=gene-HMPREF3052_08785;Dbxref=NCBI_GP:OFO27416.1;Name=OFO27416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684834.1;locus_tag=HMPREF3052_08785;product=hypothetical protein;protein_id=OFO27416.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 8324 9352 . - . ID=gene-HMPREF3052_08790;Name=HMPREF3052_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08790 GCA_001815685.1|KV821642.1 Protein Homology CDS 8324 9352 . - 0 ID=cds-OFO27417.1;Parent=gene-HMPREF3052_08790;Dbxref=NCBI_GP:OFO27417.1;Name=OFO27417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747170.1;locus_tag=HMPREF3052_08790;product=hypothetical protein;protein_id=OFO27417.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 9363 10799 . - . ID=gene-HMPREF3052_08795;Name=HMPREF3052_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08795 GCA_001815685.1|KV821642.1 Protein Homology CDS 9363 10799 . - 0 ID=cds-OFO27418.1;Parent=gene-HMPREF3052_08795;Dbxref=NCBI_GP:OFO27418.1;Name=OFO27418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575397.1;locus_tag=HMPREF3052_08795;product=alginate O-acetyltransferase;protein_id=OFO27418.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 10846 11484 . - . ID=gene-HMPREF3052_08800;Name=HMPREF3052_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08800 GCA_001815685.1|KV821642.1 Protein Homology CDS 10846 11484 . - 0 ID=cds-OFO27419.1;Parent=gene-HMPREF3052_08800;Dbxref=NCBI_GP:OFO27419.1;Name=OFO27419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747165.1;locus_tag=HMPREF3052_08800;product=hypothetical protein;protein_id=OFO27419.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 11714 12382 . + . ID=gene-HMPREF3052_08805;Name=HMPREF3052_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08805 GCA_001815685.1|KV821642.1 Protein Homology CDS 11714 12382 . + 0 ID=cds-OFO27420.1;Parent=gene-HMPREF3052_08805;Dbxref=NCBI_GP:OFO27420.1;Name=OFO27420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693249.1;locus_tag=HMPREF3052_08805;product=DnaA regulatory inactivator Hda;protein_id=OFO27420.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 12379 13047 . + . ID=gene-HMPREF3052_08810;Name=HMPREF3052_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08810 GCA_001815685.1|KV821642.1 Protein Homology CDS 12379 13047 . + 0 ID=cds-OFO27421.1;Parent=gene-HMPREF3052_08810;Dbxref=NCBI_GP:OFO27421.1;Name=OFO27421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687170.1;locus_tag=HMPREF3052_08810;product=phosphoserine phosphatase;protein_id=OFO27421.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 13197 13421 . + . ID=gene-HMPREF3052_08815;Name=HMPREF3052_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08815 GCA_001815685.1|KV821642.1 Protein Homology CDS 13197 13421 . + 0 ID=cds-OFO27446.1;Parent=gene-HMPREF3052_08815;Dbxref=NCBI_GP:OFO27446.1;Name=OFO27446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682435.1;locus_tag=HMPREF3052_08815;product=hypothetical protein;protein_id=OFO27446.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 13579 14364 . + . ID=gene-HMPREF3052_08820;Name=HMPREF3052_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08820 GCA_001815685.1|KV821642.1 Protein Homology CDS 13579 14364 . + 0 ID=cds-OFO27422.1;Parent=gene-HMPREF3052_08820;Dbxref=NCBI_GP:OFO27422.1;Name=OFO27422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682437.1;locus_tag=HMPREF3052_08820;product=hypothetical protein;protein_id=OFO27422.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 14528 14890 . - . ID=gene-HMPREF3052_08825;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=HMPREF3052_08825 GCA_001815685.1|KV821642.1 cmsearch tmRNA 14528 14890 . - . ID=rna-HMPREF3052_08825;Parent=gene-HMPREF3052_08825;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_08825;product=transfer-messenger RNA GCA_001815685.1|KV821642.1 cmsearch exon 14528 14890 . - . ID=exon-HMPREF3052_08825-1;Parent=rna-HMPREF3052_08825;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_08825;product=transfer-messenger RNA GCA_001815685.1|KV821642.1 Genbank gene 15004 16218 . - . ID=gene-HMPREF3052_08830;Name=HMPREF3052_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08830 GCA_001815685.1|KV821642.1 Protein Homology CDS 15004 16218 . - 0 ID=cds-OFO27423.1;Parent=gene-HMPREF3052_08830;Dbxref=NCBI_GP:OFO27423.1;Name=OFO27423.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448754.1;locus_tag=HMPREF3052_08830;product=aminotransferase;protein_id=OFO27423.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 16303 16518 . - . ID=gene-HMPREF3052_08835;Name=HMPREF3052_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08835 GCA_001815685.1|KV821642.1 Protein Homology CDS 16303 16518 . - 0 ID=cds-OFO27424.1;Parent=gene-HMPREF3052_08835;Dbxref=NCBI_GP:OFO27424.1;Name=OFO27424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682441.1;locus_tag=HMPREF3052_08835;product=tautomerase;protein_id=OFO27424.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 16684 17283 . + . ID=gene-HMPREF3052_08840;Name=HMPREF3052_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08840 GCA_001815685.1|KV821642.1 Protein Homology CDS 16684 17283 . + 0 ID=cds-OFO27447.1;Parent=gene-HMPREF3052_08840;Dbxref=NCBI_GP:OFO27447.1;Name=OFO27447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747155.1;locus_tag=HMPREF3052_08840;product=toluene tolerance protein;protein_id=OFO27447.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 17343 17903 . - . ID=gene-HMPREF3052_08845;Name=HMPREF3052_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08845 GCA_001815685.1|KV821642.1 Protein Homology CDS 17343 17903 . - 0 ID=cds-OFO27425.1;Parent=gene-HMPREF3052_08845;Dbxref=NCBI_GP:OFO27425.1;Name=OFO27425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZQ8.1;locus_tag=HMPREF3052_08845;product=elongation factor P;protein_id=OFO27425.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 17946 19103 . - . ID=gene-HMPREF3052_08850;Name=HMPREF3052_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08850 GCA_001815685.1|KV821642.1 Protein Homology CDS 17946 19103 . - 0 ID=cds-OFO27426.1;Parent=gene-HMPREF3052_08850;Dbxref=NCBI_GP:OFO27426.1;Name=OFO27426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685349.1;locus_tag=HMPREF3052_08850;product=hypothetical protein;protein_id=OFO27426.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 19135 19413 . - . ID=gene-HMPREF3052_08855;Name=HMPREF3052_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08855 GCA_001815685.1|KV821642.1 Protein Homology CDS 19135 19413 . - 0 ID=cds-OFO27427.1;Parent=gene-HMPREF3052_08855;Dbxref=NCBI_GP:OFO27427.1;Name=OFO27427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519862.1;locus_tag=HMPREF3052_08855;product=hypothetical protein;protein_id=OFO27427.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 19516 20304 . + . ID=gene-HMPREF3052_08860;Name=HMPREF3052_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08860 GCA_001815685.1|KV821642.1 Protein Homology CDS 19516 20304 . + 0 ID=cds-OFO27428.1;Parent=gene-HMPREF3052_08860;Dbxref=NCBI_GP:OFO27428.1;Name=OFO27428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519861.1;locus_tag=HMPREF3052_08860;product=NAD(+) synthetase;protein_id=OFO27428.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 20372 20572 . - . ID=gene-HMPREF3052_08865;Name=HMPREF3052_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08865 GCA_001815685.1|KV821642.1 Protein Homology CDS 20372 20572 . - 0 ID=cds-OFO27429.1;Parent=gene-HMPREF3052_08865;Dbxref=NCBI_GP:OFO27429.1;Name=OFO27429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239016.1;locus_tag=HMPREF3052_08865;product=hypothetical protein;protein_id=OFO27429.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 20689 21828 . + . ID=gene-HMPREF3052_08870;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=HMPREF3052_08870 GCA_001815685.1|KV821642.1 Protein Homology CDS 20689 21828 . + 0 ID=cds-OFO27430.1;Parent=gene-HMPREF3052_08870;Dbxref=NCBI_GP:OFO27430.1;Name=OFO27430.1;Note=Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine;gbkey=CDS;gene=metX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519859.1;locus_tag=HMPREF3052_08870;product=homoserine O-acetyltransferase;protein_id=OFO27430.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 21825 22406 . + . ID=gene-HMPREF3052_08875;Name=HMPREF3052_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08875 GCA_001815685.1|KV821642.1 Protein Homology CDS 21825 22406 . + 0 ID=cds-OFO27431.1;Parent=gene-HMPREF3052_08875;Dbxref=NCBI_GP:OFO27431.1;Name=OFO27431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002229346.1;locus_tag=HMPREF3052_08875;product=methionine biosynthesis protein MetW;protein_id=OFO27431.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 22502 22966 . - . ID=gene-HMPREF3052_08880;Name=HMPREF3052_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08880 GCA_001815685.1|KV821642.1 Protein Homology CDS 22502 22966 . - 0 ID=cds-OFO27432.1;Parent=gene-HMPREF3052_08880;Dbxref=NCBI_GP:OFO27432.1;Name=OFO27432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682453.1;locus_tag=HMPREF3052_08880;product=protein-tyrosine-phosphatase;protein_id=OFO27432.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 23053 24153 . - . ID=gene-HMPREF3052_08885;Name=HMPREF3052_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08885 GCA_001815685.1|KV821642.1 Protein Homology CDS 23053 24153 . - 0 ID=cds-OFO27433.1;Parent=gene-HMPREF3052_08885;Dbxref=NCBI_GP:OFO27433.1;Name=OFO27433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519856.1;locus_tag=HMPREF3052_08885;product=conjugal transfer protein;protein_id=OFO27433.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 24358 24771 . + . ID=gene-HMPREF3052_08890;Name=HMPREF3052_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08890 GCA_001815685.1|KV821642.1 Protein Homology CDS 24358 24771 . + 0 ID=cds-OFO27434.1;Parent=gene-HMPREF3052_08890;Dbxref=NCBI_GP:OFO27434.1;Name=OFO27434.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685011.1;locus_tag=HMPREF3052_08890;product=lactoylglutathione lyase;protein_id=OFO27434.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 24825 25574 . - . ID=gene-HMPREF3052_08895;Name=HMPREF3052_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08895 GCA_001815685.1|KV821642.1 Protein Homology CDS 24825 25574 . - 0 ID=cds-OFO27435.1;Parent=gene-HMPREF3052_08895;Dbxref=NCBI_GP:OFO27435.1;Name=OFO27435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685273.1;locus_tag=HMPREF3052_08895;product=acyltransferase;protein_id=OFO27435.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 25634 26389 . - . ID=gene-HMPREF3052_08900;Name=HMPREF3052_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08900 GCA_001815685.1|KV821642.1 Protein Homology CDS 25634 26389 . - 0 ID=cds-OFO27436.1;Parent=gene-HMPREF3052_08900;Dbxref=NCBI_GP:OFO27436.1;Name=OFO27436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681047.1;locus_tag=HMPREF3052_08900;product=hemolysin;protein_id=OFO27436.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank pseudogene 26698 28028 . + . ID=gene-HMPREF3052_08905;Name=HMPREF3052_08905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08905;pseudo=true GCA_001815685.1|KV821642.1 Protein Homology CDS 26698 28028 . + 0 ID=cds-HMPREF3052_08905;Parent=gene-HMPREF3052_08905;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777081.1;locus_tag=HMPREF3052_08905;product=adhesin;pseudo=true;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 28123 29055 . + . ID=gene-HMPREF3052_08910;Name=HMPREF3052_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08910 GCA_001815685.1|KV821642.1 Protein Homology CDS 28123 29055 . + 0 ID=cds-OFO27437.1;Parent=gene-HMPREF3052_08910;Dbxref=NCBI_GP:OFO27437.1;Name=OFO27437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685108.1;locus_tag=HMPREF3052_08910;product=autotransporter;protein_id=OFO27437.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 29238 29711 . + . ID=gene-HMPREF3052_08915;Name=HMPREF3052_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08915 GCA_001815685.1|KV821642.1 Protein Homology CDS 29238 29711 . + 0 ID=cds-OFO27438.1;Parent=gene-HMPREF3052_08915;Dbxref=NCBI_GP:OFO27438.1;Name=OFO27438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519850.1;locus_tag=HMPREF3052_08915;product=iron-sulfur cluster repair protein DnrN;protein_id=OFO27438.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 29869 30585 . + . ID=gene-HMPREF3052_08920;Name=HMPREF3052_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08920 GCA_001815685.1|KV821642.1 Protein Homology CDS 29869 30585 . + 0 ID=cds-OFO27439.1;Parent=gene-HMPREF3052_08920;Dbxref=NCBI_GP:OFO27439.1;Name=OFO27439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747125.1;locus_tag=HMPREF3052_08920;product=hypothetical protein;protein_id=OFO27439.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 30627 31592 . - . ID=gene-HMPREF3052_08925;Name=HMPREF3052_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08925 GCA_001815685.1|KV821642.1 Protein Homology CDS 30627 31592 . - 0 ID=cds-OFO27440.1;Parent=gene-HMPREF3052_08925;Dbxref=NCBI_GP:OFO27440.1;Name=OFO27440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685232.1;locus_tag=HMPREF3052_08925;product=tRNA-dihydrouridine synthase C;protein_id=OFO27440.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 31676 33250 . + . ID=gene-HMPREF3052_08930;Name=HMPREF3052_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08930 GCA_001815685.1|KV821642.1 Protein Homology CDS 31676 33250 . + 0 ID=cds-OFO27441.1;Parent=gene-HMPREF3052_08930;Dbxref=NCBI_GP:OFO27441.1;Name=OFO27441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519847.1;locus_tag=HMPREF3052_08930;product=glycosyl transferase;protein_id=OFO27441.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 33473 34801 . + . ID=gene-HMPREF3052_08935;Name=HMPREF3052_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08935 GCA_001815685.1|KV821642.1 Protein Homology CDS 33473 34801 . + 0 ID=cds-OFO27442.1;Parent=gene-HMPREF3052_08935;Dbxref=NCBI_GP:OFO27442.1;Name=OFO27442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747117.1;locus_tag=HMPREF3052_08935;product=C4-dicarboxylate ABC transporter;protein_id=OFO27442.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 34871 35296 . - . ID=gene-HMPREF3052_08940;Name=HMPREF3052_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08940 GCA_001815685.1|KV821642.1 Protein Homology CDS 34871 35296 . - 0 ID=cds-OFO27443.1;Parent=gene-HMPREF3052_08940;Dbxref=NCBI_GP:OFO27443.1;Name=OFO27443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678890.1;locus_tag=HMPREF3052_08940;product=YSIRK family Signal peptide;protein_id=OFO27443.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 35486 36949 . + . ID=gene-HMPREF3052_08945;Name=HMPREF3052_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08945 GCA_001815685.1|KV821642.1 Protein Homology CDS 35486 36949 . + 0 ID=cds-OFO27444.1;Parent=gene-HMPREF3052_08945;Dbxref=NCBI_GP:OFO27444.1;Name=OFO27444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767939.1;locus_tag=HMPREF3052_08945;product=IMP dehydrogenase;protein_id=OFO27444.1;transl_table=11 GCA_001815685.1|KV821642.1 Genbank gene 37243 38262 . + . ID=gene-HMPREF3052_08950;Name=HMPREF3052_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08950 GCA_001815685.1|KV821642.1 Protein Homology CDS 37243 38262 . + 0 ID=cds-OFO27445.1;Parent=gene-HMPREF3052_08950;Dbxref=NCBI_GP:OFO27445.1;Name=OFO27445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519841.1;locus_tag=HMPREF3052_08950;product=lipopolysaccharide heptosyltransferase II;protein_id=OFO27445.1;transl_table=11 ##sequence-region KV821643.1 1 14945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821643.1 Genbank region 1 14945 . + . ID=KV821643.1:1..14945;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821643.1 Genbank pseudogene 3 285 . + . ID=gene-HMPREF3052_08955;Name=HMPREF3052_08955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_08955;pseudo=true GCA_001815685.1|KV821643.1 Protein Homology CDS 3 285 . + 0 ID=cds-HMPREF3052_08955;Parent=gene-HMPREF3052_08955;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233006.1;locus_tag=HMPREF3052_08955;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 907 1281 . - . ID=gene-HMPREF3052_08960;Name=HMPREF3052_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08960 GCA_001815685.1|KV821643.1 Protein Homology CDS 907 1281 . - 0 ID=cds-OFO27369.1;Parent=gene-HMPREF3052_08960;Dbxref=NCBI_GP:OFO27369.1;Name=OFO27369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115879.1;locus_tag=HMPREF3052_08960;product=50S ribosomal protein L17;protein_id=OFO27369.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 1306 2292 . - . ID=gene-HMPREF3052_08965;Name=HMPREF3052_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08965 GCA_001815685.1|KV821643.1 Protein Homology CDS 1306 2292 . - 0 ID=cds-OFO27370.1;Parent=gene-HMPREF3052_08965;Dbxref=NCBI_GP:OFO27370.1;Name=OFO27370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313011.1;locus_tag=HMPREF3052_08965;product=DNA-directed RNA polymerase subunit alpha;protein_id=OFO27370.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 2318 2938 . - . ID=gene-HMPREF3052_08970;Name=HMPREF3052_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08970 GCA_001815685.1|KV821643.1 Protein Homology CDS 2318 2938 . - 0 ID=cds-OFO27371.1;Parent=gene-HMPREF3052_08970;Dbxref=NCBI_GP:OFO27371.1;Name=OFO27371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282443.1;locus_tag=HMPREF3052_08970;product=30S ribosomal protein S4;protein_id=OFO27371.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 2958 3353 . - . ID=gene-HMPREF3052_08975;Name=HMPREF3052_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08975 GCA_001815685.1|KV821643.1 Protein Homology CDS 2958 3353 . - 0 ID=cds-OFO27372.1;Parent=gene-HMPREF3052_08975;Dbxref=NCBI_GP:OFO27372.1;Name=OFO27372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019959419.1;locus_tag=HMPREF3052_08975;product=30S ribosomal protein S11;protein_id=OFO27372.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 3373 3735 . - . ID=gene-HMPREF3052_08980;Name=HMPREF3052_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08980 GCA_001815685.1|KV821643.1 Protein Homology CDS 3373 3735 . - 0 ID=cds-OFO27373.1;Parent=gene-HMPREF3052_08980;Dbxref=NCBI_GP:OFO27373.1;Name=OFO27373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66386.1;locus_tag=HMPREF3052_08980;product=30S ribosomal protein S13;protein_id=OFO27373.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 3935 4153 . - . ID=gene-HMPREF3052_08985;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HMPREF3052_08985 GCA_001815685.1|KV821643.1 Protein Homology CDS 3935 4153 . - 0 ID=cds-OFO27374.1;Parent=gene-HMPREF3052_08985;Dbxref=NCBI_GP:OFO27374.1;Name=OFO27374.1;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;gbkey=CDS;gene=infA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271038.1;locus_tag=HMPREF3052_08985;product=translation initiation factor IF-1;protein_id=OFO27374.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 4158 5471 . - . ID=gene-HMPREF3052_08990;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF3052_08990 GCA_001815685.1|KV821643.1 Protein Homology CDS 4158 5471 . - 0 ID=cds-OFO27375.1;Parent=gene-HMPREF3052_08990;Dbxref=NCBI_GP:OFO27375.1;Name=OFO27375.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464597.1;locus_tag=HMPREF3052_08990;product=preprotein translocase subunit SecY;protein_id=OFO27375.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 5485 5919 . - . ID=gene-HMPREF3052_08995;Name=HMPREF3052_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_08995 GCA_001815685.1|KV821643.1 Protein Homology CDS 5485 5919 . - 0 ID=cds-OFO27376.1;Parent=gene-HMPREF3052_08995;Dbxref=NCBI_GP:OFO27376.1;Name=OFO27376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175229.1;locus_tag=HMPREF3052_08995;product=50S ribosomal protein L15;protein_id=OFO27376.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 5921 6106 . - . ID=gene-HMPREF3052_09000;Name=HMPREF3052_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09000 GCA_001815685.1|KV821643.1 Protein Homology CDS 5921 6106 . - 0 ID=cds-OFO27377.1;Parent=gene-HMPREF3052_09000;Dbxref=NCBI_GP:OFO27377.1;Name=OFO27377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282459.1;locus_tag=HMPREF3052_09000;product=50S ribosomal protein L30;protein_id=OFO27377.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 6099 6617 . - . ID=gene-HMPREF3052_09005;Name=HMPREF3052_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09005 GCA_001815685.1|KV821643.1 Protein Homology CDS 6099 6617 . - 0 ID=cds-OFO27378.1;Parent=gene-HMPREF3052_09005;Dbxref=NCBI_GP:OFO27378.1;Name=OFO27378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684704.1;locus_tag=HMPREF3052_09005;product=30S ribosomal protein S5;protein_id=OFO27378.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 6635 6988 . - . ID=gene-HMPREF3052_09010;Name=HMPREF3052_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09010 GCA_001815685.1|KV821643.1 Protein Homology CDS 6635 6988 . - 0 ID=cds-OFO27379.1;Parent=gene-HMPREF3052_09010;Dbxref=NCBI_GP:OFO27379.1;Name=OFO27379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5U3.1;locus_tag=HMPREF3052_09010;product=50S ribosomal protein L18;protein_id=OFO27379.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 7002 7535 . - . ID=gene-HMPREF3052_09015;Name=HMPREF3052_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09015 GCA_001815685.1|KV821643.1 Protein Homology CDS 7002 7535 . - 0 ID=cds-OFO27380.1;Parent=gene-HMPREF3052_09015;Dbxref=NCBI_GP:OFO27380.1;Name=OFO27380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520191.1;locus_tag=HMPREF3052_09015;product=50S ribosomal protein L6;protein_id=OFO27380.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 7549 7941 . - . ID=gene-HMPREF3052_09020;Name=HMPREF3052_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09020 GCA_001815685.1|KV821643.1 Protein Homology CDS 7549 7941 . - 0 ID=cds-OFO27381.1;Parent=gene-HMPREF3052_09020;Dbxref=NCBI_GP:OFO27381.1;Name=OFO27381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66628.1;locus_tag=HMPREF3052_09020;product=30S ribosomal protein S8;protein_id=OFO27381.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 7956 8261 . - . ID=gene-HMPREF3052_09025;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF3052_09025 GCA_001815685.1|KV821643.1 Protein Homology CDS 7956 8261 . - 0 ID=cds-OFO27382.1;Parent=gene-HMPREF3052_09025;Dbxref=NCBI_GP:OFO27382.1;Name=OFO27382.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the Legionella proteins appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006464921.1;locus_tag=HMPREF3052_09025;product=30S ribosomal protein S14;protein_id=OFO27382.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 8264 8803 . - . ID=gene-HMPREF3052_09030;Name=HMPREF3052_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09030 GCA_001815685.1|KV821643.1 Protein Homology CDS 8264 8803 . - 0 ID=cds-OFO27383.1;Parent=gene-HMPREF3052_09030;Dbxref=NCBI_GP:OFO27383.1;Name=OFO27383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215436.1;locus_tag=HMPREF3052_09030;product=50S ribosomal protein L5;protein_id=OFO27383.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 8813 9136 . - . ID=gene-HMPREF3052_09035;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF3052_09035 GCA_001815685.1|KV821643.1 Protein Homology CDS 8813 9136 . - 0 ID=cds-OFO27384.1;Parent=gene-HMPREF3052_09035;Dbxref=NCBI_GP:OFO27384.1;Name=OFO27384.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:SwissProt:P60732.1;locus_tag=HMPREF3052_09035;product=50S ribosomal protein L24;protein_id=OFO27384.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 9148 9516 . - . ID=gene-HMPREF3052_09040;Name=HMPREF3052_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09040 GCA_001815685.1|KV821643.1 Protein Homology CDS 9148 9516 . - 0 ID=cds-OFO27385.1;Parent=gene-HMPREF3052_09040;Dbxref=NCBI_GP:OFO27385.1;Name=OFO27385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215434.1;locus_tag=HMPREF3052_09040;product=50S ribosomal protein L14;protein_id=OFO27385.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 9744 10007 . - . ID=gene-HMPREF3052_09045;Name=HMPREF3052_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09045 GCA_001815685.1|KV821643.1 Protein Homology CDS 9744 10007 . - 0 ID=cds-OFO27386.1;Parent=gene-HMPREF3052_09045;Dbxref=NCBI_GP:OFO27386.1;Name=OFO27386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175232.1;locus_tag=HMPREF3052_09045;product=30S ribosomal protein S17;protein_id=OFO27386.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 10007 10198 . - . ID=gene-HMPREF3052_09050;Name=HMPREF3052_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09050 GCA_001815685.1|KV821643.1 Protein Homology CDS 10007 10198 . - 0 ID=cds-OFO27387.1;Parent=gene-HMPREF3052_09050;Dbxref=NCBI_GP:OFO27387.1;Name=OFO27387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175233.1;locus_tag=HMPREF3052_09050;product=50S ribosomal protein L29;protein_id=OFO27387.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 10198 10614 . - . ID=gene-HMPREF3052_09055;Name=HMPREF3052_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09055 GCA_001815685.1|KV821643.1 Protein Homology CDS 10198 10614 . - 0 ID=cds-OFO27388.1;Parent=gene-HMPREF3052_09055;Dbxref=NCBI_GP:OFO27388.1;Name=OFO27388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008955643.1;locus_tag=HMPREF3052_09055;product=50S ribosomal protein L16;protein_id=OFO27388.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 10598 11290 . - . ID=gene-HMPREF3052_09060;Name=HMPREF3052_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09060 GCA_001815685.1|KV821643.1 Protein Homology CDS 10598 11290 . - 0 ID=cds-OFO27389.1;Parent=gene-HMPREF3052_09060;Dbxref=NCBI_GP:OFO27389.1;Name=OFO27389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707143.1;locus_tag=HMPREF3052_09060;product=30S ribosomal protein S3;protein_id=OFO27389.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 11300 11629 . - . ID=gene-HMPREF3052_09065;Name=HMPREF3052_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09065 GCA_001815685.1|KV821643.1 Protein Homology CDS 11300 11629 . - 0 ID=cds-OFO27390.1;Parent=gene-HMPREF3052_09065;Dbxref=NCBI_GP:OFO27390.1;Name=OFO27390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795898.1;locus_tag=HMPREF3052_09065;product=50S ribosomal protein L22;protein_id=OFO27390.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 11638 11916 . - . ID=gene-HMPREF3052_09070;Name=HMPREF3052_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09070 GCA_001815685.1|KV821643.1 Protein Homology CDS 11638 11916 . - 0 ID=cds-OFO27391.1;Parent=gene-HMPREF3052_09070;Dbxref=NCBI_GP:OFO27391.1;Name=OFO27391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7NQF6.1;locus_tag=HMPREF3052_09070;product=30S ribosomal protein S19;protein_id=OFO27391.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 11922 12755 . - . ID=gene-HMPREF3052_09075;Name=HMPREF3052_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09075 GCA_001815685.1|KV821643.1 Protein Homology CDS 11922 12755 . - 0 ID=cds-OFO27392.1;Parent=gene-HMPREF3052_09075;Dbxref=NCBI_GP:OFO27392.1;Name=OFO27392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002228874.1;locus_tag=HMPREF3052_09075;product=50S ribosomal protein L2;protein_id=OFO27392.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 12761 13081 . - . ID=gene-HMPREF3052_09080;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=HMPREF3052_09080 GCA_001815685.1|KV821643.1 Protein Homology CDS 12761 13081 . - 0 ID=cds-OFO27393.1;Parent=gene-HMPREF3052_09080;Dbxref=NCBI_GP:OFO27393.1;Name=OFO27393.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426082.1;locus_tag=HMPREF3052_09080;product=50S ribosomal protein L23;protein_id=OFO27393.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 13072 13692 . - . ID=gene-HMPREF3052_09085;Name=HMPREF3052_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09085 GCA_001815685.1|KV821643.1 Protein Homology CDS 13072 13692 . - 0 ID=cds-OFO27394.1;Parent=gene-HMPREF3052_09085;Dbxref=NCBI_GP:OFO27394.1;Name=OFO27394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P61056.1;locus_tag=HMPREF3052_09085;product=50S ribosomal protein L4;protein_id=OFO27394.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 13692 14336 . - . ID=gene-HMPREF3052_09090;Name=HMPREF3052_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09090 GCA_001815685.1|KV821643.1 Protein Homology CDS 13692 14336 . - 0 ID=cds-OFO27395.1;Parent=gene-HMPREF3052_09090;Dbxref=NCBI_GP:OFO27395.1;Name=OFO27395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272311.1;locus_tag=HMPREF3052_09090;product=50S ribosomal protein L3;protein_id=OFO27395.1;transl_table=11 GCA_001815685.1|KV821643.1 Genbank gene 14587 14898 . - . ID=gene-HMPREF3052_09095;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF3052_09095 GCA_001815685.1|KV821643.1 Protein Homology CDS 14587 14898 . - 0 ID=cds-OFO27396.1;Parent=gene-HMPREF3052_09095;Dbxref=NCBI_GP:OFO27396.1;Name=OFO27396.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014235480.1;locus_tag=HMPREF3052_09095;product=30S ribosomal protein S10;protein_id=OFO27396.1;transl_table=11 ##sequence-region KV821644.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821644.1 Genbank region 1 256 . + . ID=KV821644.1:1..256;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821644.1 Genbank pseudogene 1 250 . + . ID=gene-HMPREF3052_09100;Name=HMPREF3052_09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09100;pseudo=true GCA_001815685.1|KV821644.1 GeneMarkS+ CDS 1 250 . + 1 ID=cds-HMPREF3052_09100;Parent=gene-HMPREF3052_09100;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09100;product=terminase;pseudo=true;transl_table=11 ##sequence-region KV821645.1 1 396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821645.1 Genbank region 1 396 . + . ID=KV821645.1:1..396;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821645.1 Genbank pseudogene 1 341 . - . ID=gene-HMPREF3052_09105;Name=HMPREF3052_09105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09105;pseudo=true GCA_001815685.1|KV821645.1 GeneMarkS+ CDS 1 341 . - 0 ID=cds-HMPREF3052_09105;Parent=gene-HMPREF3052_09105;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09105;product=TspB protein;pseudo=true;transl_table=11 ##sequence-region KV821646.1 1 488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821646.1 Genbank region 1 488 . + . ID=KV821646.1:1..488;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821646.1 Genbank pseudogene 1 488 . + . ID=gene-HMPREF3052_09110;Name=HMPREF3052_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09110;pseudo=true GCA_001815685.1|KV821646.1 Protein Homology CDS 1 488 . + 0 ID=cds-HMPREF3052_09110;Parent=gene-HMPREF3052_09110;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003697216.1;locus_tag=HMPREF3052_09110;product=terminase;pseudo=true;transl_table=11 ##sequence-region KV821647.1 1 296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821647.1 Genbank region 1 296 . + . ID=KV821647.1:1..296;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821647.1 Genbank pseudogene 1 296 . - . ID=gene-HMPREF3052_09115;Name=HMPREF3052_09115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09115;pseudo=true GCA_001815685.1|KV821647.1 GeneMarkS+ CDS 1 296 . - 0 ID=cds-HMPREF3052_09115;Parent=gene-HMPREF3052_09115;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09115;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821648.1 1 19784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821648.1 Genbank region 1 19784 . + . ID=KV821648.1:1..19784;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821648.1 Genbank pseudogene 1 217 . + . ID=gene-HMPREF3052_09120;Name=HMPREF3052_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09120;pseudo=true GCA_001815685.1|KV821648.1 Protein Homology CDS 1 217 . + 1 ID=cds-HMPREF3052_09120;Parent=gene-HMPREF3052_09120;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761891.1;locus_tag=HMPREF3052_09120;product=transposase;pseudo=true;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 302 1276 . - . ID=gene-HMPREF3052_09125;Name=HMPREF3052_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09125 GCA_001815685.1|KV821648.1 Protein Homology CDS 302 1276 . - 0 ID=cds-OFO27321.1;Parent=gene-HMPREF3052_09125;Dbxref=NCBI_GP:OFO27321.1;Name=OFO27321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747109.1;locus_tag=HMPREF3052_09125;product=fructose-bisphosphatase;protein_id=OFO27321.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 1344 1697 . - . ID=gene-HMPREF3052_09130;Name=HMPREF3052_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09130 GCA_001815685.1|KV821648.1 Protein Homology CDS 1344 1697 . - 0 ID=cds-OFO27322.1;Parent=gene-HMPREF3052_09130;Dbxref=NCBI_GP:OFO27322.1;Name=OFO27322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683617.1;locus_tag=HMPREF3052_09130;product=hypothetical protein;protein_id=OFO27322.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 1828 2673 . - . ID=gene-HMPREF3052_09135;Name=HMPREF3052_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09135 GCA_001815685.1|KV821648.1 Protein Homology CDS 1828 2673 . - 0 ID=cds-OFO27323.1;Parent=gene-HMPREF3052_09135;Dbxref=NCBI_GP:OFO27323.1;Name=OFO27323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519838.1;locus_tag=HMPREF3052_09135;product=competence protein ComJ;protein_id=OFO27323.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 2799 3413 . + . ID=gene-HMPREF3052_09140;Name=HMPREF3052_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09140 GCA_001815685.1|KV821648.1 Protein Homology CDS 2799 3413 . + 0 ID=cds-OFO27324.1;Parent=gene-HMPREF3052_09140;Dbxref=NCBI_GP:OFO27324.1;Name=OFO27324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519837.1;locus_tag=HMPREF3052_09140;product=riboflavin synthase subunit alpha;protein_id=OFO27324.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 3429 4295 . + . ID=gene-HMPREF3052_09145;Name=HMPREF3052_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09145 GCA_001815685.1|KV821648.1 Protein Homology CDS 3429 4295 . + 0 ID=cds-OFO27325.1;Parent=gene-HMPREF3052_09145;Dbxref=NCBI_GP:OFO27325.1;Name=OFO27325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767909.1;locus_tag=HMPREF3052_09145;product=AAA family ATPase;protein_id=OFO27325.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 4361 4789 . - . ID=gene-HMPREF3052_09150;Name=HMPREF3052_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09150 GCA_001815685.1|KV821648.1 Protein Homology CDS 4361 4789 . - 0 ID=cds-OFO27326.1;Parent=gene-HMPREF3052_09150;Dbxref=NCBI_GP:OFO27326.1;Name=OFO27326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747101.1;locus_tag=HMPREF3052_09150;product=hypothetical protein;protein_id=OFO27326.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 5067 5747 . + . ID=gene-HMPREF3052_09155;Name=HMPREF3052_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09155 GCA_001815685.1|KV821648.1 Protein Homology CDS 5067 5747 . + 0 ID=cds-OFO27327.1;Parent=gene-HMPREF3052_09155;Dbxref=NCBI_GP:OFO27327.1;Name=OFO27327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683464.1;locus_tag=HMPREF3052_09155;product=ribulose-phosphate 3-epimerase;protein_id=OFO27327.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 5852 7234 . - . ID=gene-HMPREF3052_09160;Name=HMPREF3052_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09160 GCA_001815685.1|KV821648.1 Protein Homology CDS 5852 7234 . - 0 ID=cds-OFO27328.1;Parent=gene-HMPREF3052_09160;Dbxref=NCBI_GP:OFO27328.1;Name=OFO27328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213982.1;locus_tag=HMPREF3052_09160;product=phosphoglucomutase;protein_id=OFO27328.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 7356 8204 . - . ID=gene-HMPREF3052_09165;Name=HMPREF3052_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09165 GCA_001815685.1|KV821648.1 Protein Homology CDS 7356 8204 . - 0 ID=cds-OFO27329.1;Parent=gene-HMPREF3052_09165;Dbxref=NCBI_GP:OFO27329.1;Name=OFO27329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747096.1;locus_tag=HMPREF3052_09165;product=hypothetical protein;protein_id=OFO27329.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 8391 8888 . + . ID=gene-HMPREF3052_09170;Name=HMPREF3052_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09170 GCA_001815685.1|KV821648.1 Protein Homology CDS 8391 8888 . + 0 ID=cds-OFO27330.1;Parent=gene-HMPREF3052_09170;Dbxref=NCBI_GP:OFO27330.1;Name=OFO27330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015674483.1;locus_tag=HMPREF3052_09170;product=phosphatidylethanolamine-binding protein;protein_id=OFO27330.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 8965 9474 . - . ID=gene-HMPREF3052_09175;Name=HMPREF3052_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09175 GCA_001815685.1|KV821648.1 Protein Homology CDS 8965 9474 . - 0 ID=cds-OFO27331.1;Parent=gene-HMPREF3052_09175;Dbxref=NCBI_GP:OFO27331.1;Name=OFO27331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743061.1;locus_tag=HMPREF3052_09175;product=peptidylprolyl isomerase;protein_id=OFO27331.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 9593 11008 . - . ID=gene-HMPREF3052_09180;Name=HMPREF3052_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09180 GCA_001815685.1|KV821648.1 Protein Homology CDS 9593 11008 . - 0 ID=cds-OFO27332.1;Parent=gene-HMPREF3052_09180;Dbxref=NCBI_GP:OFO27332.1;Name=OFO27332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449222.1;locus_tag=HMPREF3052_09180;product=anion:sodium symporter;protein_id=OFO27332.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 11283 12446 . - . ID=gene-HMPREF3052_09185;Name=HMPREF3052_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09185 GCA_001815685.1|KV821648.1 Protein Homology CDS 11283 12446 . - 0 ID=cds-OFO27333.1;Parent=gene-HMPREF3052_09185;Dbxref=NCBI_GP:OFO27333.1;Name=OFO27333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519827.1;locus_tag=HMPREF3052_09185;product=sugar transporter;protein_id=OFO27333.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 12591 12800 . + . ID=gene-HMPREF3052_09190;Name=HMPREF3052_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09190 GCA_001815685.1|KV821648.1 Protein Homology CDS 12591 12800 . + 0 ID=cds-OFO27334.1;Parent=gene-HMPREF3052_09190;Dbxref=NCBI_GP:OFO27334.1;Name=OFO27334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674677.1;locus_tag=HMPREF3052_09190;product=hypothetical protein;protein_id=OFO27334.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 12900 15062 . + . ID=gene-HMPREF3052_09195;Name=HMPREF3052_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09195 GCA_001815685.1|KV821648.1 Protein Homology CDS 12900 15062 . + 0 ID=cds-OFO27335.1;Parent=gene-HMPREF3052_09195;Dbxref=NCBI_GP:OFO27335.1;Name=OFO27335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213288.1;locus_tag=HMPREF3052_09195;product=copper-transporting ATPase;protein_id=OFO27335.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 15150 15407 . + . ID=gene-HMPREF3052_09200;Name=HMPREF3052_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09200 GCA_001815685.1|KV821648.1 Protein Homology CDS 15150 15407 . + 0 ID=cds-OFO27336.1;Parent=gene-HMPREF3052_09200;Dbxref=NCBI_GP:OFO27336.1;Name=OFO27336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747080.1;locus_tag=HMPREF3052_09200;product=hypothetical protein;protein_id=OFO27336.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 15530 16096 . + . ID=gene-HMPREF3052_09205;Name=HMPREF3052_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09205 GCA_001815685.1|KV821648.1 Protein Homology CDS 15530 16096 . + 0 ID=cds-OFO27337.1;Parent=gene-HMPREF3052_09205;Dbxref=NCBI_GP:OFO27337.1;Name=OFO27337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683568.1;locus_tag=HMPREF3052_09205;product=lipase;protein_id=OFO27337.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 16217 16465 . + . ID=gene-HMPREF3052_09210;Name=HMPREF3052_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09210 GCA_001815685.1|KV821648.1 Protein Homology CDS 16217 16465 . + 0 ID=cds-OFO27338.1;Parent=gene-HMPREF3052_09210;Dbxref=NCBI_GP:OFO27338.1;Name=OFO27338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312114.1;locus_tag=HMPREF3052_09210;product=CsbD-like protein;protein_id=OFO27338.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 16530 17558 . - . ID=gene-HMPREF3052_09215;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=HMPREF3052_09215 GCA_001815685.1|KV821648.1 Protein Homology CDS 16530 17558 . - 0 ID=cds-OFO27339.1;Parent=gene-HMPREF3052_09215;Dbxref=NCBI_GP:OFO27339.1;Name=OFO27339.1;Note=Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=trpD;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F7H5.1;locus_tag=HMPREF3052_09215;product=anthranilate phosphoribosyltransferase;protein_id=OFO27339.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 17647 18237 . - . ID=gene-HMPREF3052_09220;Name=HMPREF3052_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09220 GCA_001815685.1|KV821648.1 Protein Homology CDS 17647 18237 . - 0 ID=cds-OFO27340.1;Parent=gene-HMPREF3052_09220;Dbxref=NCBI_GP:OFO27340.1;Name=OFO27340.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519816.1;locus_tag=HMPREF3052_09220;product=glutamine amidotransferase;protein_id=OFO27340.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 18513 18734 . - . ID=gene-HMPREF3052_09225;Name=HMPREF3052_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09225 GCA_001815685.1|KV821648.1 GeneMarkS+ CDS 18513 18734 . - 0 ID=cds-OFO27341.1;Parent=gene-HMPREF3052_09225;Dbxref=NCBI_GP:OFO27341.1;Name=OFO27341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09225;product=hypothetical protein;protein_id=OFO27341.1;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 18934 19133 . - . ID=gene-HMPREF3052_09230;Name=HMPREF3052_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09230;partial=true;start_range=.,18934 GCA_001815685.1|KV821648.1 Protein Homology CDS 18934 19133 . - 0 ID=cds-OFO27312.1;Parent=gene-HMPREF3052_09230;Dbxref=NCBI_GP:OFO27312.1;Name=OFO27312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174539.1;locus_tag=HMPREF3052_09230;partial=true;product=hypothetical protein;protein_id=OFO27312.1;start_range=.,18934;transl_table=11 GCA_001815685.1|KV821648.1 Genbank gene 19148 19784 . - . ID=gene-HMPREF3052_09235;Name=HMPREF3052_09235;end_range=19784,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09235;partial=true GCA_001815685.1|KV821648.1 Protein Homology CDS 19148 19784 . - 1 ID=cds-OFO27313.1;Parent=gene-HMPREF3052_09235;Dbxref=NCBI_GP:OFO27313.1;Name=OFO27313.1;end_range=19784,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520677.1;locus_tag=HMPREF3052_09235;partial=true;product=hypothetical protein;protein_id=OFO27313.1;transl_table=11 ##sequence-region KV821649.1 1 412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821649.1 Genbank region 1 412 . + . ID=KV821649.1:1..412;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821649.1 Genbank pseudogene 214 412 . - . ID=gene-HMPREF3052_09240;Name=HMPREF3052_09240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09240;pseudo=true GCA_001815685.1|KV821649.1 GeneMarkS+ CDS 214 412 . - 1 ID=cds-HMPREF3052_09240;Parent=gene-HMPREF3052_09240;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09240;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821650.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821650.1 Genbank region 1 644 . + . ID=KV821650.1:1..644;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821650.1 Genbank pseudogene 1 288 . - . ID=gene-HMPREF3052_09245;Name=HMPREF3052_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09245;pseudo=true GCA_001815685.1|KV821650.1 Protein Homology CDS 1 288 . - 0 ID=cds-HMPREF3052_09245;Parent=gene-HMPREF3052_09245;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520692.1;locus_tag=HMPREF3052_09245;product=chromophore lyase;pseudo=true;transl_table=11 GCA_001815685.1|KV821650.1 Genbank gene 407 644 . + . ID=gene-HMPREF3052_09250;Name=HMPREF3052_09250;end_range=644,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09250;partial=true GCA_001815685.1|KV821650.1 Protein Homology CDS 407 644 . + 0 ID=cds-OFO27199.1;Parent=gene-HMPREF3052_09250;Dbxref=NCBI_GP:OFO27199.1;Name=OFO27199.1;end_range=644,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003689136.1;locus_tag=HMPREF3052_09250;partial=true;product=hypothetical protein;protein_id=OFO27199.1;transl_table=11 ##sequence-region KV821651.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821651.1 Genbank region 1 280 . + . ID=KV821651.1:1..280;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821651.1 Genbank pseudogene 1 278 . - . ID=gene-HMPREF3052_09255;Name=HMPREF3052_09255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09255;pseudo=true GCA_001815685.1|KV821651.1 Protein Homology CDS 1 278 . - 0 ID=cds-HMPREF3052_09255;Parent=gene-HMPREF3052_09255;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520677.1;locus_tag=HMPREF3052_09255;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821652.1 1 46035 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821652.1 Genbank region 1 46035 . + . ID=KV821652.1:1..46035;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821652.1 Genbank direct_repeat 322 612 . + . ID=id-KV821652.1:322..612;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=67..92;rpt_unit_seq=cacacagccgcccgaaggcggctgga GCA_001815685.1|KV821652.1 Genbank gene 799 1092 . - . ID=gene-HMPREF3052_09260;Name=HMPREF3052_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09260 GCA_001815685.1|KV821652.1 Protein Homology CDS 799 1092 . - 0 ID=cds-OFO27081.1;Parent=gene-HMPREF3052_09260;Dbxref=NCBI_GP:OFO27081.1;Name=OFO27081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271087.1;locus_tag=HMPREF3052_09260;product=CRISPR-associated endonuclease Cas2;protein_id=OFO27081.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 1167 2180 . - . ID=gene-HMPREF3052_09265;Name=HMPREF3052_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09265 GCA_001815685.1|KV821652.1 Protein Homology CDS 1167 2180 . - 0 ID=cds-OFO27082.1;Parent=gene-HMPREF3052_09265;Dbxref=NCBI_GP:OFO27082.1;Name=OFO27082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762781.1;locus_tag=HMPREF3052_09265;product=subtype I-C CRISPR-associated endonuclease Cas1;protein_id=OFO27082.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 2374 3963 . - . ID=gene-HMPREF3052_09270;Name=HMPREF3052_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09270 GCA_001815685.1|KV821652.1 Protein Homology CDS 2374 3963 . - 0 ID=cds-OFO27083.1;Parent=gene-HMPREF3052_09270;Dbxref=NCBI_GP:OFO27083.1;Name=OFO27083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_046777.1;locus_tag=HMPREF3052_09270;product=funZ protein;protein_id=OFO27083.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 4042 4695 . - . ID=gene-HMPREF3052_09275;Name=HMPREF3052_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09275 GCA_001815685.1|KV821652.1 Protein Homology CDS 4042 4695 . - 0 ID=cds-OFO27084.1;Parent=gene-HMPREF3052_09275;Dbxref=NCBI_GP:OFO27084.1;Name=OFO27084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762760.1;locus_tag=HMPREF3052_09275;product=CRISPR-associated protein Cas4;protein_id=OFO27084.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 4708 5547 . - . ID=gene-HMPREF3052_09280;Name=HMPREF3052_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09280 GCA_001815685.1|KV821652.1 Protein Homology CDS 4708 5547 . - 0 ID=cds-OFO27085.1;Parent=gene-HMPREF3052_09280;Dbxref=NCBI_GP:OFO27085.1;Name=OFO27085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524600.1;locus_tag=HMPREF3052_09280;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=OFO27085.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 5569 7587 . - . ID=gene-HMPREF3052_09285;Name=HMPREF3052_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09285 GCA_001815685.1|KV821652.1 Protein Homology CDS 5569 7587 . - 0 ID=cds-OFO27086.1;Parent=gene-HMPREF3052_09285;Dbxref=NCBI_GP:OFO27086.1;Name=OFO27086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635205.1;locus_tag=HMPREF3052_09285;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=OFO27086.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 7584 8306 . - . ID=gene-HMPREF3052_09290;Name=HMPREF3052_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09290 GCA_001815685.1|KV821652.1 Protein Homology CDS 7584 8306 . - 0 ID=cds-OFO27087.1;Parent=gene-HMPREF3052_09290;Dbxref=NCBI_GP:OFO27087.1;Name=OFO27087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271083.1;locus_tag=HMPREF3052_09290;product=type I-C CRISPR-associated protein Cas5;protein_id=OFO27087.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 8314 10791 . - . ID=gene-HMPREF3052_09295;Name=HMPREF3052_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09295 GCA_001815685.1|KV821652.1 Protein Homology CDS 8314 10791 . - 0 ID=cds-OFO27088.1;Parent=gene-HMPREF3052_09295;Dbxref=NCBI_GP:OFO27088.1;Name=OFO27088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005565160.1;locus_tag=HMPREF3052_09295;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=OFO27088.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank pseudogene 10929 12720 . - . ID=gene-HMPREF3052_09300;Name=HMPREF3052_09300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09300;pseudo=true GCA_001815685.1|KV821652.1 Protein Homology CDS 10929 12720 . - 0 ID=cds-HMPREF3052_09300;Parent=gene-HMPREF3052_09300;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702609.1;locus_tag=HMPREF3052_09300;product=CRISPR-associated helicase/endonuclease Cas3;pseudo=true;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 12842 13771 . - . ID=gene-HMPREF3052_09305;Name=HMPREF3052_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09305 GCA_001815685.1|KV821652.1 Protein Homology CDS 12842 13771 . - 0 ID=cds-OFO27089.1;Parent=gene-HMPREF3052_09305;Dbxref=NCBI_GP:OFO27089.1;Name=OFO27089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746223.1;locus_tag=HMPREF3052_09305;product=prolyl aminopeptidase;protein_id=OFO27089.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 13896 14330 . + . ID=gene-HMPREF3052_09310;Name=HMPREF3052_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09310 GCA_001815685.1|KV821652.1 Protein Homology CDS 13896 14330 . + 0 ID=cds-OFO27090.1;Parent=gene-HMPREF3052_09310;Dbxref=NCBI_GP:OFO27090.1;Name=OFO27090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746221.1;locus_tag=HMPREF3052_09310;product=acyl-CoA thioesterase;protein_id=OFO27090.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank pseudogene 14577 15368 . + . ID=gene-HMPREF3052_09315;Name=HMPREF3052_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09315;pseudo=true GCA_001815685.1|KV821652.1 Protein Homology CDS 14577 15368 . + 0 ID=cds-HMPREF3052_09315;Parent=gene-HMPREF3052_09315;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746219.1;locus_tag=HMPREF3052_09315;product=transporter;pseudo=true;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 15526 15602 . - . ID=gene-HMPREF3052_09320;Name=HMPREF3052_09320;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_09320 GCA_001815685.1|KV821652.1 tRNAscan-SE tRNA 15526 15602 . - . ID=rna-HMPREF3052_09320;Parent=gene-HMPREF3052_09320;anticodon=(pos:complement(15566..15568));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_09320;product=tRNA-Pro GCA_001815685.1|KV821652.1 tRNAscan-SE exon 15526 15602 . - . ID=exon-HMPREF3052_09320-1;Parent=rna-HMPREF3052_09320;anticodon=(pos:complement(15566..15568));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_09320;product=tRNA-Pro GCA_001815685.1|KV821652.1 Genbank gene 15757 17280 . - . ID=gene-HMPREF3052_09325;Name=HMPREF3052_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09325 GCA_001815685.1|KV821652.1 Protein Homology CDS 15757 17280 . - 0 ID=cds-OFO27091.1;Parent=gene-HMPREF3052_09325;Dbxref=NCBI_GP:OFO27091.1;Name=OFO27091.1;Note=catalyzes the formation of fumarate from malate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221888.1;locus_tag=HMPREF3052_09325;product=fumarate hydratase;protein_id=OFO27091.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank pseudogene 18134 18772 . + . ID=gene-HMPREF3052_09330;Name=HMPREF3052_09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09330;pseudo=true GCA_001815685.1|KV821652.1 Protein Homology CDS 18134 18772 . + 0 ID=cds-HMPREF3052_09330;Parent=gene-HMPREF3052_09330;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687715.1;locus_tag=HMPREF3052_09330;product=ferredoxin;pseudo=true;transl_table=11 GCA_001815685.1|KV821652.1 Genbank pseudogene 18772 20399 . + . ID=gene-HMPREF3052_09335;Name=HMPREF3052_09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09335;pseudo=true GCA_001815685.1|KV821652.1 Protein Homology CDS 18772 20399 . + 0 ID=cds-HMPREF3052_09335;Parent=gene-HMPREF3052_09335;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687716.1;locus_tag=HMPREF3052_09335;product=L-aspartate oxidase;pseudo=true;transl_table=11 GCA_001815685.1|KV821652.1 Genbank pseudogene 20396 21649 . + . ID=gene-HMPREF3052_09340;Name=HMPREF3052_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09340;pseudo=true GCA_001815685.1|KV821652.1 Protein Homology CDS 20396 21649 . + 0 ID=cds-HMPREF3052_09340;Parent=gene-HMPREF3052_09340;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173873.1;locus_tag=HMPREF3052_09340;product=NADH-quinone oxidoreductase subunit F;pseudo=true;transl_table=11 GCA_001815685.1|KV821652.1 Genbank pseudogene 21867 23308 . + . ID=gene-HMPREF3052_09345;Name=HMPREF3052_09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09345;pseudo=true GCA_001815685.1|KV821652.1 Protein Homology CDS 21867 23308 . + 0 ID=cds-HMPREF3052_09345;Parent=gene-HMPREF3052_09345;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709104.1;locus_tag=HMPREF3052_09345;product=C4-dicarboxylate ABC transporter;pseudo=true;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 23403 24815 . + . ID=gene-HMPREF3052_09350;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF3052_09350 GCA_001815685.1|KV821652.1 Protein Homology CDS 23403 24815 . + 0 ID=cds-OFO27092.1;Parent=gene-HMPREF3052_09350;Dbxref=NCBI_GP:OFO27092.1;Name=OFO27092.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740742.1;locus_tag=HMPREF3052_09350;product=potassium transporter peripheral membrane component;protein_id=OFO27092.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 24893 25753 . - . ID=gene-HMPREF3052_09355;Name=HMPREF3052_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09355 GCA_001815685.1|KV821652.1 Protein Homology CDS 24893 25753 . - 0 ID=cds-OFO27093.1;Parent=gene-HMPREF3052_09355;Dbxref=NCBI_GP:OFO27093.1;Name=OFO27093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746206.1;locus_tag=HMPREF3052_09355;product=prolipoprotein diacylglyceryl transferase;protein_id=OFO27093.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 25828 26958 . - . ID=gene-HMPREF3052_09360;Name=HMPREF3052_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09360 GCA_001815685.1|KV821652.1 Protein Homology CDS 25828 26958 . - 0 ID=cds-OFO27094.1;Parent=gene-HMPREF3052_09360;Dbxref=NCBI_GP:OFO27094.1;Name=OFO27094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269980.1;locus_tag=HMPREF3052_09360;product=hypothetical protein;protein_id=OFO27094.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 27133 28020 . + . ID=gene-HMPREF3052_09365;Name=HMPREF3052_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09365 GCA_001815685.1|KV821652.1 Protein Homology CDS 27133 28020 . + 0 ID=cds-OFO27095.1;Parent=gene-HMPREF3052_09365;Dbxref=NCBI_GP:OFO27095.1;Name=OFO27095.1;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JUK2.1;locus_tag=HMPREF3052_09365;product=acetylglutamate kinase;protein_id=OFO27095.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 28282 29568 . + . ID=gene-HMPREF3052_09370;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF3052_09370 GCA_001815685.1|KV821652.1 Protein Homology CDS 28282 29568 . + 0 ID=cds-OFO27096.1;Parent=gene-HMPREF3052_09370;Dbxref=NCBI_GP:OFO27096.1;Name=OFO27096.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270954.1;locus_tag=HMPREF3052_09370;product=phosphopyruvate hydratase;protein_id=OFO27096.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 29585 29860 . + . ID=gene-HMPREF3052_09375;Name=HMPREF3052_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09375 GCA_001815685.1|KV821652.1 Protein Homology CDS 29585 29860 . + 0 ID=cds-OFO27097.1;Parent=gene-HMPREF3052_09375;Dbxref=NCBI_GP:OFO27097.1;Name=OFO27097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679613.1;locus_tag=HMPREF3052_09375;product=cell division protein FtsB;protein_id=OFO27097.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 29962 30453 . + . ID=gene-HMPREF3052_09380;Name=HMPREF3052_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09380 GCA_001815685.1|KV821652.1 Protein Homology CDS 29962 30453 . + 0 ID=cds-OFO27098.1;Parent=gene-HMPREF3052_09380;Dbxref=NCBI_GP:OFO27098.1;Name=OFO27098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746196.1;locus_tag=HMPREF3052_09380;product=hypothetical protein;protein_id=OFO27098.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 30566 31273 . + . ID=gene-HMPREF3052_09385;Name=HMPREF3052_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09385 GCA_001815685.1|KV821652.1 Protein Homology CDS 30566 31273 . + 0 ID=cds-OFO27099.1;Parent=gene-HMPREF3052_09385;Dbxref=NCBI_GP:OFO27099.1;Name=OFO27099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746194.1;locus_tag=HMPREF3052_09385;product=hypothetical protein;protein_id=OFO27099.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 31346 31873 . - . ID=gene-HMPREF3052_09390;Name=HMPREF3052_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09390 GCA_001815685.1|KV821652.1 Protein Homology CDS 31346 31873 . - 0 ID=cds-OFO27100.1;Parent=gene-HMPREF3052_09390;Dbxref=NCBI_GP:OFO27100.1;Name=OFO27100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710541.1;locus_tag=HMPREF3052_09390;product=single-stranded DNA-binding protein;protein_id=OFO27100.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 31875 33257 . - . ID=gene-HMPREF3052_09395;Name=HMPREF3052_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09395 GCA_001815685.1|KV821652.1 Protein Homology CDS 31875 33257 . - 0 ID=cds-OFO27101.1;Parent=gene-HMPREF3052_09395;Dbxref=NCBI_GP:OFO27101.1;Name=OFO27101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951164.1;locus_tag=HMPREF3052_09395;product=hypothetical protein;protein_id=OFO27101.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 33459 34082 . - . ID=gene-HMPREF3052_09400;Name=HMPREF3052_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09400 GCA_001815685.1|KV821652.1 Protein Homology CDS 33459 34082 . - 0 ID=cds-OFO27102.1;Parent=gene-HMPREF3052_09400;Dbxref=NCBI_GP:OFO27102.1;Name=OFO27102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756649.1;locus_tag=HMPREF3052_09400;product=transglycosylase;protein_id=OFO27102.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 34256 35764 . + . ID=gene-HMPREF3052_09405;Name=HMPREF3052_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09405 GCA_001815685.1|KV821652.1 Protein Homology CDS 34256 35764 . + 0 ID=cds-OFO27103.1;Parent=gene-HMPREF3052_09405;Dbxref=NCBI_GP:OFO27103.1;Name=OFO27103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679600.1;locus_tag=HMPREF3052_09405;product=exopolyphosphatase;protein_id=OFO27103.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 35852 36223 . + . ID=gene-HMPREF3052_09410;Name=HMPREF3052_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09410 GCA_001815685.1|KV821652.1 Protein Homology CDS 35852 36223 . + 0 ID=cds-OFO27104.1;Parent=gene-HMPREF3052_09410;Dbxref=NCBI_GP:OFO27104.1;Name=OFO27104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273043.1;locus_tag=HMPREF3052_09410;product=ribosome-binding factor A;protein_id=OFO27104.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 36234 37097 . + . ID=gene-HMPREF3052_09415;Name=HMPREF3052_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09415 GCA_001815685.1|KV821652.1 GeneMarkS+ CDS 36234 37097 . + 0 ID=cds-OFO27105.1;Parent=gene-HMPREF3052_09415;Dbxref=NCBI_GP:OFO27105.1;Name=OFO27105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09415;product=hypothetical protein;protein_id=OFO27105.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 37164 38078 . + . ID=gene-HMPREF3052_09420;Name=HMPREF3052_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09420 GCA_001815685.1|KV821652.1 Protein Homology CDS 37164 38078 . + 0 ID=cds-OFO27113.1;Parent=gene-HMPREF3052_09420;Dbxref=NCBI_GP:OFO27113.1;Name=OFO27113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685620.1;locus_tag=HMPREF3052_09420;product=pseudouridine synthase;protein_id=OFO27113.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 38101 38727 . + . ID=gene-HMPREF3052_09425;Name=HMPREF3052_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09425 GCA_001815685.1|KV821652.1 Protein Homology CDS 38101 38727 . + 0 ID=cds-OFO27106.1;Parent=gene-HMPREF3052_09425;Dbxref=NCBI_GP:OFO27106.1;Name=OFO27106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685518.1;locus_tag=HMPREF3052_09425;product=NAD(P)H-hydrate epimerase;protein_id=OFO27106.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 38777 39136 . - . ID=gene-HMPREF3052_09430;Name=HMPREF3052_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09430 GCA_001815685.1|KV821652.1 Protein Homology CDS 38777 39136 . - 0 ID=cds-OFO27107.1;Parent=gene-HMPREF3052_09430;Dbxref=NCBI_GP:OFO27107.1;Name=OFO27107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685593.1;locus_tag=HMPREF3052_09430;product=fluoride ion transporter CrcB;protein_id=OFO27107.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 39218 39895 . - . ID=gene-HMPREF3052_09435;Name=HMPREF3052_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09435 GCA_001815685.1|KV821652.1 Protein Homology CDS 39218 39895 . - 0 ID=cds-OFO27114.1;Parent=gene-HMPREF3052_09435;Dbxref=NCBI_GP:OFO27114.1;Name=OFO27114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273502.1;locus_tag=HMPREF3052_09435;product=hypothetical protein;protein_id=OFO27114.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 40060 43113 . + . ID=gene-HMPREF3052_09440;Name=HMPREF3052_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09440 GCA_001815685.1|KV821652.1 Protein Homology CDS 40060 43113 . + 0 ID=cds-OFO27108.1;Parent=gene-HMPREF3052_09440;Dbxref=NCBI_GP:OFO27108.1;Name=OFO27108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311265.1;locus_tag=HMPREF3052_09440;product=cell division protein FtsK;protein_id=OFO27108.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 43417 44151 . + . ID=gene-HMPREF3052_09445;Name=HMPREF3052_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09445 GCA_001815685.1|KV821652.1 Protein Homology CDS 43417 44151 . + 0 ID=cds-OFO27109.1;Parent=gene-HMPREF3052_09445;Dbxref=NCBI_GP:OFO27109.1;Name=OFO27109.1;Note=porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685595.1;locus_tag=HMPREF3052_09445;product=aquaporin;protein_id=OFO27109.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 44299 44631 . + . ID=gene-HMPREF3052_09450;Name=HMPREF3052_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09450 GCA_001815685.1|KV821652.1 Protein Homology CDS 44299 44631 . + 0 ID=cds-OFO27115.1;Parent=gene-HMPREF3052_09450;Dbxref=NCBI_GP:OFO27115.1;Name=OFO27115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520787.1;locus_tag=HMPREF3052_09450;product=general secretion pathway protein GspG;protein_id=OFO27115.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 44619 44897 . + . ID=gene-HMPREF3052_09455;Name=HMPREF3052_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09455 GCA_001815685.1|KV821652.1 Protein Homology CDS 44619 44897 . + 0 ID=cds-OFO27110.1;Parent=gene-HMPREF3052_09455;Dbxref=NCBI_GP:OFO27110.1;Name=OFO27110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685708.1;locus_tag=HMPREF3052_09455;product=stress responsive alpha-beta barrel;protein_id=OFO27110.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 44957 45631 . - . ID=gene-HMPREF3052_09460;Name=HMPREF3052_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09460 GCA_001815685.1|KV821652.1 Protein Homology CDS 44957 45631 . - 0 ID=cds-OFO27111.1;Parent=gene-HMPREF3052_09460;Dbxref=NCBI_GP:OFO27111.1;Name=OFO27111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KU78.1;locus_tag=HMPREF3052_09460;product=hypothetical protein;protein_id=OFO27111.1;transl_table=11 GCA_001815685.1|KV821652.1 Genbank gene 45669 46035 . - . ID=gene-HMPREF3052_09465;Name=HMPREF3052_09465;end_range=46035,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09465;partial=true GCA_001815685.1|KV821652.1 Protein Homology CDS 45669 46035 . - 1 ID=cds-OFO27112.1;Parent=gene-HMPREF3052_09465;Dbxref=NCBI_GP:OFO27112.1;Name=OFO27112.1;end_range=46035,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581578.1;locus_tag=HMPREF3052_09465;partial=true;product=transposase;protein_id=OFO27112.1;transl_table=11 ##sequence-region KV821653.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821653.1 Genbank region 1 342 . + . ID=KV821653.1:1..342;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821653.1 Genbank pseudogene 1 342 . + . ID=gene-HMPREF3052_09470;Name=HMPREF3052_09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09470;pseudo=true GCA_001815685.1|KV821653.1 Protein Homology CDS 1 342 . + 0 ID=cds-HMPREF3052_09470;Parent=gene-HMPREF3052_09470;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448484.1;locus_tag=HMPREF3052_09470;product=exodeoxyribonuclease III;pseudo=true;transl_table=11 ##sequence-region KV821654.1 1 40366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821654.1 Genbank region 1 40366 . + . ID=KV821654.1:1..40366;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821654.1 Genbank pseudogene 119 4395 . - . ID=gene-HMPREF3052_09475;Name=HMPREF3052_09475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09475;pseudo=true GCA_001815685.1|KV821654.1 Protein Homology CDS 119 4395 . - 0 ID=cds-HMPREF3052_09475;Parent=gene-HMPREF3052_09475;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746010.1;locus_tag=HMPREF3052_09475;product=4-alpha-glucanotransferase;pseudo=true;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 4612 5094 . - . ID=gene-HMPREF3052_09480;Name=HMPREF3052_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09480 GCA_001815685.1|KV821654.1 Protein Homology CDS 4612 5094 . - 0 ID=cds-OFO26878.1;Parent=gene-HMPREF3052_09480;Dbxref=NCBI_GP:OFO26878.1;Name=OFO26878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448722.1;locus_tag=HMPREF3052_09480;product=peptidylprolyl isomerase;protein_id=OFO26878.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 5601 5876 . + . ID=gene-HMPREF3052_09485;Name=HMPREF3052_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09485 GCA_001815685.1|KV821654.1 Protein Homology CDS 5601 5876 . + 0 ID=cds-OFO26879.1;Parent=gene-HMPREF3052_09485;Dbxref=NCBI_GP:OFO26879.1;Name=OFO26879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285065.1;locus_tag=HMPREF3052_09485;product=hypothetical protein;protein_id=OFO26879.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 5972 7345 . + . ID=gene-HMPREF3052_09490;Name=HMPREF3052_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09490 GCA_001815685.1|KV821654.1 Protein Homology CDS 5972 7345 . + 0 ID=cds-OFO26880.1;Parent=gene-HMPREF3052_09490;Dbxref=NCBI_GP:OFO26880.1;Name=OFO26880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746006.1;locus_tag=HMPREF3052_09490;product=oxidoreductase;protein_id=OFO26880.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 7400 8230 . - . ID=gene-HMPREF3052_09495;Name=HMPREF3052_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09495 GCA_001815685.1|KV821654.1 Protein Homology CDS 7400 8230 . - 0 ID=cds-OFO26881.1;Parent=gene-HMPREF3052_09495;Dbxref=NCBI_GP:OFO26881.1;Name=OFO26881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519496.1;locus_tag=HMPREF3052_09495;product=diadenosine tetraphosphatase;protein_id=OFO26881.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 8301 8690 . - . ID=gene-HMPREF3052_09500;Name=HMPREF3052_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09500 GCA_001815685.1|KV821654.1 Protein Homology CDS 8301 8690 . - 0 ID=cds-OFO26908.1;Parent=gene-HMPREF3052_09500;Dbxref=NCBI_GP:OFO26908.1;Name=OFO26908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754044.1;locus_tag=HMPREF3052_09500;product=reactive intermediate/imine deaminase;protein_id=OFO26908.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 8861 9640 . + . ID=gene-HMPREF3052_09505;Name=HMPREF3052_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09505 GCA_001815685.1|KV821654.1 Protein Homology CDS 8861 9640 . + 0 ID=cds-OFO26882.1;Parent=gene-HMPREF3052_09505;Dbxref=NCBI_GP:OFO26882.1;Name=OFO26882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272575.1;locus_tag=HMPREF3052_09505;product=hypothetical protein;protein_id=OFO26882.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 9720 9810 . + . ID=gene-HMPREF3052_09510;Name=HMPREF3052_09510;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_09510 GCA_001815685.1|KV821654.1 tRNAscan-SE tRNA 9720 9810 . + . ID=rna-HMPREF3052_09510;Parent=gene-HMPREF3052_09510;anticodon=(pos:9754..9756);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_09510;product=tRNA-Ser GCA_001815685.1|KV821654.1 tRNAscan-SE exon 9720 9810 . + . ID=exon-HMPREF3052_09510-1;Parent=rna-HMPREF3052_09510;anticodon=(pos:9754..9756);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_09510;product=tRNA-Ser GCA_001815685.1|KV821654.1 Genbank gene 10051 11655 . - . ID=gene-HMPREF3052_09515;Name=HMPREF3052_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09515 GCA_001815685.1|KV821654.1 Protein Homology CDS 10051 11655 . - 0 ID=cds-OFO26883.1;Parent=gene-HMPREF3052_09515;Dbxref=NCBI_GP:OFO26883.1;Name=OFO26883.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519489.1;locus_tag=HMPREF3052_09515;product=microcin ABC transporter ATP-binding protein;protein_id=OFO26883.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 11680 12588 . - . ID=gene-HMPREF3052_09520;Name=HMPREF3052_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09520 GCA_001815685.1|KV821654.1 Protein Homology CDS 11680 12588 . - 0 ID=cds-OFO26884.1;Parent=gene-HMPREF3052_09520;Dbxref=NCBI_GP:OFO26884.1;Name=OFO26884.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425765.1;locus_tag=HMPREF3052_09520;product=peptide ABC transporter permease;protein_id=OFO26884.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 12661 13581 . - . ID=gene-HMPREF3052_09525;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=HMPREF3052_09525 GCA_001815685.1|KV821654.1 Protein Homology CDS 12661 13581 . - 0 ID=cds-OFO26909.1;Parent=gene-HMPREF3052_09525;Dbxref=NCBI_GP:OFO26909.1;Name=OFO26909.1;gbkey=CDS;gene=oppB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007394724.1;locus_tag=HMPREF3052_09525;product=oligopeptide transporter permease;protein_id=OFO26909.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 13814 15610 . - . ID=gene-HMPREF3052_09530;Name=HMPREF3052_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09530 GCA_001815685.1|KV821654.1 Protein Homology CDS 13814 15610 . - 0 ID=cds-OFO26885.1;Parent=gene-HMPREF3052_09530;Dbxref=NCBI_GP:OFO26885.1;Name=OFO26885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146933.1;locus_tag=HMPREF3052_09530;product=peptidase M24;protein_id=OFO26885.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 15686 17305 . - . ID=gene-HMPREF3052_09535;Name=HMPREF3052_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09535 GCA_001815685.1|KV821654.1 Protein Homology CDS 15686 17305 . - 0 ID=cds-OFO26886.1;Parent=gene-HMPREF3052_09535;Dbxref=NCBI_GP:OFO26886.1;Name=OFO26886.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745986.1;locus_tag=HMPREF3052_09535;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=OFO26886.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 17633 18703 . + . ID=gene-HMPREF3052_09540;Name=HMPREF3052_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09540 GCA_001815685.1|KV821654.1 Protein Homology CDS 17633 18703 . + 0 ID=cds-OFO26887.1;Parent=gene-HMPREF3052_09540;Dbxref=NCBI_GP:OFO26887.1;Name=OFO26887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683064.1;locus_tag=HMPREF3052_09540;product=hypothetical protein;protein_id=OFO26887.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 18830 20344 . + . ID=gene-HMPREF3052_09545;Name=HMPREF3052_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09545 GCA_001815685.1|KV821654.1 Protein Homology CDS 18830 20344 . + 0 ID=cds-OFO26888.1;Parent=gene-HMPREF3052_09545;Dbxref=NCBI_GP:OFO26888.1;Name=OFO26888.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680923.1;locus_tag=HMPREF3052_09545;product=spermidine synthase;protein_id=OFO26888.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 20512 20979 . + . ID=gene-HMPREF3052_09550;Name=HMPREF3052_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09550 GCA_001815685.1|KV821654.1 Protein Homology CDS 20512 20979 . + 0 ID=cds-OFO26889.1;Parent=gene-HMPREF3052_09550;Dbxref=NCBI_GP:OFO26889.1;Name=OFO26889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283164.1;locus_tag=HMPREF3052_09550;product=exclusion suppressor FxsA;protein_id=OFO26889.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 21158 23005 . + . ID=gene-HMPREF3052_09555;Name=HMPREF3052_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09555 GCA_001815685.1|KV821654.1 Protein Homology CDS 21158 23005 . + 0 ID=cds-OFO26890.1;Parent=gene-HMPREF3052_09555;Dbxref=NCBI_GP:OFO26890.1;Name=OFO26890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680925.1;locus_tag=HMPREF3052_09555;product=lytic murein transglycosylase;protein_id=OFO26890.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 23283 23495 . + . ID=gene-HMPREF3052_09560;Name=HMPREF3052_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09560 GCA_001815685.1|KV821654.1 Protein Homology CDS 23283 23495 . + 0 ID=cds-OFO26891.1;Parent=gene-HMPREF3052_09560;Dbxref=NCBI_GP:OFO26891.1;Name=OFO26891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66519.1;locus_tag=HMPREF3052_09560;product=30S ribosomal protein S21;protein_id=OFO26891.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 23593 24039 . + . ID=gene-HMPREF3052_09565;Name=HMPREF3052_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09565 GCA_001815685.1|KV821654.1 Protein Homology CDS 23593 24039 . + 0 ID=cds-OFO26892.1;Parent=gene-HMPREF3052_09565;Dbxref=NCBI_GP:OFO26892.1;Name=OFO26892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680927.1;locus_tag=HMPREF3052_09565;product=glutamyl-tRNA amidotransferase;protein_id=OFO26892.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 24103 24969 . - . ID=gene-HMPREF3052_09570;Name=HMPREF3052_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09570 GCA_001815685.1|KV821654.1 Protein Homology CDS 24103 24969 . - 0 ID=cds-OFO26893.1;Parent=gene-HMPREF3052_09570;Dbxref=NCBI_GP:OFO26893.1;Name=OFO26893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449313.1;locus_tag=HMPREF3052_09570;product=acetyl-CoA carboxylase carboxyl transferase subunit beta;protein_id=OFO26893.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 25045 25830 . - . ID=gene-HMPREF3052_09575;Name=HMPREF3052_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09575 GCA_001815685.1|KV821654.1 Protein Homology CDS 25045 25830 . - 0 ID=cds-OFO26894.1;Parent=gene-HMPREF3052_09575;Dbxref=NCBI_GP:OFO26894.1;Name=OFO26894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVE0.1;locus_tag=HMPREF3052_09575;product=tryptophan synthase subunit alpha;protein_id=OFO26894.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 26156 26503 . - . ID=gene-HMPREF3052_09580;Name=HMPREF3052_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09580 GCA_001815685.1|KV821654.1 Protein Homology CDS 26156 26503 . - 0 ID=cds-OFO26895.1;Parent=gene-HMPREF3052_09580;Dbxref=NCBI_GP:OFO26895.1;Name=OFO26895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519475.1;locus_tag=HMPREF3052_09580;product=hypothetical protein;protein_id=OFO26895.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 26487 26789 . - . ID=gene-HMPREF3052_09585;Name=HMPREF3052_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09585 GCA_001815685.1|KV821654.1 Protein Homology CDS 26487 26789 . - 0 ID=cds-OFO26896.1;Parent=gene-HMPREF3052_09585;Dbxref=NCBI_GP:OFO26896.1;Name=OFO26896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641098.1;locus_tag=HMPREF3052_09585;product=integration host factor subunit alpha;protein_id=OFO26896.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank pseudogene 27644 29542 . - . ID=gene-HMPREF3052_09590;Name=HMPREF3052_09590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09590;pseudo=true GCA_001815685.1|KV821654.1 Protein Homology CDS 27644 29542 . - 0 ID=cds-HMPREF3052_09590;Parent=gene-HMPREF3052_09590;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519474.1;locus_tag=HMPREF3052_09590;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 29643 30239 . - . ID=gene-HMPREF3052_09595;Name=HMPREF3052_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09595 GCA_001815685.1|KV821654.1 Protein Homology CDS 29643 30239 . - 0 ID=cds-OFO26897.1;Parent=gene-HMPREF3052_09595;Dbxref=NCBI_GP:OFO26897.1;Name=OFO26897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710784.1;locus_tag=HMPREF3052_09595;product=hypothetical protein;protein_id=OFO26897.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 30244 31341 . - . ID=gene-HMPREF3052_09600;Name=HMPREF3052_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09600 GCA_001815685.1|KV821654.1 Protein Homology CDS 30244 31341 . - 0 ID=cds-OFO26898.1;Parent=gene-HMPREF3052_09600;Dbxref=NCBI_GP:OFO26898.1;Name=OFO26898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707962.1;locus_tag=HMPREF3052_09600;product=DNA cytosine methyltransferase;protein_id=OFO26898.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 31319 31756 . - . ID=gene-HMPREF3052_09605;Name=HMPREF3052_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09605 GCA_001815685.1|KV821654.1 Protein Homology CDS 31319 31756 . - 0 ID=cds-OFO26899.1;Parent=gene-HMPREF3052_09605;Dbxref=NCBI_GP:OFO26899.1;Name=OFO26899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449275.1;locus_tag=HMPREF3052_09605;product=very short patch repair endonuclease;protein_id=OFO26899.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 31773 32762 . - . ID=gene-HMPREF3052_09610;Name=HMPREF3052_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09610 GCA_001815685.1|KV821654.1 Protein Homology CDS 31773 32762 . - 0 ID=cds-OFO26900.1;Parent=gene-HMPREF3052_09610;Dbxref=NCBI_GP:OFO26900.1;Name=OFO26900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675497.1;locus_tag=HMPREF3052_09610;product=phenylalanine--tRNA ligase subunit alpha;protein_id=OFO26900.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 33011 33370 . - . ID=gene-HMPREF3052_09615;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF3052_09615 GCA_001815685.1|KV821654.1 Protein Homology CDS 33011 33370 . - 0 ID=cds-OFO26901.1;Parent=gene-HMPREF3052_09615;Dbxref=NCBI_GP:OFO26901.1;Name=OFO26901.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004299089.1;locus_tag=HMPREF3052_09615;product=50S ribosomal protein L20;protein_id=OFO26901.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 33383 33580 . - . ID=gene-HMPREF3052_09620;Name=HMPREF3052_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09620 GCA_001815685.1|KV821654.1 Protein Homology CDS 33383 33580 . - 0 ID=cds-OFO26902.1;Parent=gene-HMPREF3052_09620;Dbxref=NCBI_GP:OFO26902.1;Name=OFO26902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641005.1;locus_tag=HMPREF3052_09620;product=50S ribosomal protein L35;protein_id=OFO26902.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 33723 34190 . - . ID=gene-HMPREF3052_09625;Name=HMPREF3052_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09625 GCA_001815685.1|KV821654.1 Protein Homology CDS 33723 34190 . - 0 ID=cds-OFO26903.1;Parent=gene-HMPREF3052_09625;Dbxref=NCBI_GP:OFO26903.1;Name=OFO26903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174075.1;locus_tag=HMPREF3052_09625;product=translation initiation factor IF-3;protein_id=OFO26903.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 34262 36175 . - . ID=gene-HMPREF3052_09630;Name=HMPREF3052_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09630 GCA_001815685.1|KV821654.1 Protein Homology CDS 34262 36175 . - 0 ID=cds-OFO26910.1;Parent=gene-HMPREF3052_09630;Dbxref=NCBI_GP:OFO26910.1;Name=OFO26910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312109.1;locus_tag=HMPREF3052_09630;product=threonine--tRNA ligase;protein_id=OFO26910.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 36228 36304 . - . ID=gene-HMPREF3052_09635;Name=HMPREF3052_09635;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_09635 GCA_001815685.1|KV821654.1 tRNAscan-SE tRNA 36228 36304 . - . ID=rna-HMPREF3052_09635;Parent=gene-HMPREF3052_09635;anticodon=(pos:complement(36268..36270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_09635;product=tRNA-Val GCA_001815685.1|KV821654.1 tRNAscan-SE exon 36228 36304 . - . ID=exon-HMPREF3052_09635-1;Parent=rna-HMPREF3052_09635;anticodon=(pos:complement(36268..36270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_09635;product=tRNA-Val GCA_001815685.1|KV821654.1 Genbank gene 36542 37657 . + . ID=gene-HMPREF3052_09640;Name=HMPREF3052_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09640 GCA_001815685.1|KV821654.1 Protein Homology CDS 36542 37657 . + 0 ID=cds-OFO26904.1;Parent=gene-HMPREF3052_09640;Dbxref=NCBI_GP:OFO26904.1;Name=OFO26904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357167.1;locus_tag=HMPREF3052_09640;product=tRNA-guanine(34) transglycosylase;protein_id=OFO26904.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 37743 38753 . + . ID=gene-HMPREF3052_09645;Name=HMPREF3052_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09645 GCA_001815685.1|KV821654.1 Protein Homology CDS 37743 38753 . + 0 ID=cds-OFO26905.1;Parent=gene-HMPREF3052_09645;Dbxref=NCBI_GP:OFO26905.1;Name=OFO26905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745958.1;locus_tag=HMPREF3052_09645;product=ferrochelatase;protein_id=OFO26905.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 38874 39272 . + . ID=gene-HMPREF3052_09650;Name=HMPREF3052_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09650 GCA_001815685.1|KV821654.1 Protein Homology CDS 38874 39272 . + 0 ID=cds-OFO26906.1;Parent=gene-HMPREF3052_09650;Dbxref=NCBI_GP:OFO26906.1;Name=OFO26906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745956.1;locus_tag=HMPREF3052_09650;product=cytochrome C;protein_id=OFO26906.1;transl_table=11 GCA_001815685.1|KV821654.1 Genbank gene 39478 39969 . + . ID=gene-HMPREF3052_09655;Name=HMPREF3052_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09655 GCA_001815685.1|KV821654.1 Protein Homology CDS 39478 39969 . + 0 ID=cds-OFO26907.1;Parent=gene-HMPREF3052_09655;Dbxref=NCBI_GP:OFO26907.1;Name=OFO26907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745954.1;locus_tag=HMPREF3052_09655;product=disulfide bond formation protein DsbB;protein_id=OFO26907.1;transl_table=11 ##sequence-region KV821655.1 1 829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821655.1 Genbank region 1 829 . + . ID=KV821655.1:1..829;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821655.1 Genbank pseudogene 1 829 . - . ID=gene-HMPREF3052_09660;Name=HMPREF3052_09660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09660;pseudo=true GCA_001815685.1|KV821655.1 GeneMarkS+ CDS 1 829 . - 1 ID=cds-HMPREF3052_09660;Parent=gene-HMPREF3052_09660;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09660;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821656.1 1 47680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821656.1 Genbank region 1 47680 . + . ID=KV821656.1:1..47680;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821656.1 Genbank gene 256 1002 . + . ID=gene-HMPREF3052_09665;Name=HMPREF3052_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09665 GCA_001815685.1|KV821656.1 Protein Homology CDS 256 1002 . + 0 ID=cds-OFO26571.1;Parent=gene-HMPREF3052_09665;Dbxref=NCBI_GP:OFO26571.1;Name=OFO26571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683227.1;locus_tag=HMPREF3052_09665;product=carbonic anhydrase;protein_id=OFO26571.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 1067 2701 . - . ID=gene-HMPREF3052_09670;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HMPREF3052_09670 GCA_001815685.1|KV821656.1 Protein Homology CDS 1067 2701 . - 0 ID=cds-OFO26572.1;Parent=gene-HMPREF3052_09670;Dbxref=NCBI_GP:OFO26572.1;Name=OFO26572.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581389.1;locus_tag=HMPREF3052_09670;product=CTP synthetase;protein_id=OFO26572.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 2826 4481 . - . ID=gene-HMPREF3052_09675;Name=HMPREF3052_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09675 GCA_001815685.1|KV821656.1 Protein Homology CDS 2826 4481 . - 0 ID=cds-OFO26573.1;Parent=gene-HMPREF3052_09675;Dbxref=NCBI_GP:OFO26573.1;Name=OFO26573.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519450.1;locus_tag=HMPREF3052_09675;product=long-chain fatty acid--CoA ligase;protein_id=OFO26573.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 4576 5679 . - . ID=gene-HMPREF3052_09680;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=HMPREF3052_09680 GCA_001815685.1|KV821656.1 Protein Homology CDS 4576 5679 . - 0 ID=cds-OFO26574.1;Parent=gene-HMPREF3052_09680;Dbxref=NCBI_GP:OFO26574.1;Name=OFO26574.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312239.1;locus_tag=HMPREF3052_09680;product=tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase;protein_id=OFO26574.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 5806 6285 . - . ID=gene-HMPREF3052_09685;Name=HMPREF3052_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09685 GCA_001815685.1|KV821656.1 Protein Homology CDS 5806 6285 . - 0 ID=cds-OFO26575.1;Parent=gene-HMPREF3052_09685;Dbxref=NCBI_GP:OFO26575.1;Name=OFO26575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212839.1;locus_tag=HMPREF3052_09685;product=hypothetical protein;protein_id=OFO26575.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 6417 6800 . - . ID=gene-HMPREF3052_09690;Name=HMPREF3052_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09690 GCA_001815685.1|KV821656.1 Protein Homology CDS 6417 6800 . - 0 ID=cds-OFO26576.1;Parent=gene-HMPREF3052_09690;Dbxref=NCBI_GP:OFO26576.1;Name=OFO26576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951219.1;locus_tag=HMPREF3052_09690;product=diacylglycerol kinase;protein_id=OFO26576.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 6869 7825 . - . ID=gene-HMPREF3052_09695;Name=HMPREF3052_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09695 GCA_001815685.1|KV821656.1 Protein Homology CDS 6869 7825 . - 0 ID=cds-OFO26577.1;Parent=gene-HMPREF3052_09695;Dbxref=NCBI_GP:OFO26577.1;Name=OFO26577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745922.1;locus_tag=HMPREF3052_09695;product=glutathione synthase;protein_id=OFO26577.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 7941 9602 . - . ID=gene-HMPREF3052_09700;Name=HMPREF3052_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09700 GCA_001815685.1|KV821656.1 Protein Homology CDS 7941 9602 . - 0 ID=cds-OFO26578.1;Parent=gene-HMPREF3052_09700;Dbxref=NCBI_GP:OFO26578.1;Name=OFO26578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686276.1;locus_tag=HMPREF3052_09700;product=DNA repair protein RecN;protein_id=OFO26578.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 9803 10477 . - . ID=gene-HMPREF3052_09705;Name=HMPREF3052_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09705 GCA_001815685.1|KV821656.1 GeneMarkS+ CDS 9803 10477 . - 0 ID=cds-OFO26579.1;Parent=gene-HMPREF3052_09705;Dbxref=NCBI_GP:OFO26579.1;Name=OFO26579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09705;product=hypothetical protein;protein_id=OFO26579.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 10549 11157 . - . ID=gene-HMPREF3052_09710;Name=HMPREF3052_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09710 GCA_001815685.1|KV821656.1 Protein Homology CDS 10549 11157 . - 0 ID=cds-OFO26580.1;Parent=gene-HMPREF3052_09710;Dbxref=NCBI_GP:OFO26580.1;Name=OFO26580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683204.1;locus_tag=HMPREF3052_09710;product=segregation and condensation protein B;protein_id=OFO26580.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 11227 11460 . - . ID=gene-HMPREF3052_09715;Name=HMPREF3052_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09715 GCA_001815685.1|KV821656.1 Protein Homology CDS 11227 11460 . - 0 ID=cds-OFO26581.1;Parent=gene-HMPREF3052_09715;Dbxref=NCBI_GP:OFO26581.1;Name=OFO26581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426681.1;locus_tag=HMPREF3052_09715;product=glutaredoxin;protein_id=OFO26581.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 11610 11810 . - . ID=gene-HMPREF3052_09720;Name=HMPREF3052_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09720 GCA_001815685.1|KV821656.1 Protein Homology CDS 11610 11810 . - 0 ID=cds-OFO26582.1;Parent=gene-HMPREF3052_09720;Dbxref=NCBI_GP:OFO26582.1;Name=OFO26582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681978.1;locus_tag=HMPREF3052_09720;product=bacterioferritin;protein_id=OFO26582.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 12038 12916 . - . ID=gene-HMPREF3052_09725;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=HMPREF3052_09725 GCA_001815685.1|KV821656.1 Protein Homology CDS 12038 12916 . - 0 ID=cds-OFO26583.1;Parent=gene-HMPREF3052_09725;Dbxref=NCBI_GP:OFO26583.1;Name=OFO26583.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681980.1;locus_tag=HMPREF3052_09725;product=site-specific tyrosine recombinase XerD;protein_id=OFO26583.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 12992 13435 . - . ID=gene-HMPREF3052_09730;Name=HMPREF3052_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09730 GCA_001815685.1|KV821656.1 Protein Homology CDS 12992 13435 . - 0 ID=cds-OFO26584.1;Parent=gene-HMPREF3052_09730;Dbxref=NCBI_GP:OFO26584.1;Name=OFO26584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286126.1;locus_tag=HMPREF3052_09730;product=thiol peroxidase;protein_id=OFO26584.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 13472 14107 . - . ID=gene-HMPREF3052_09735;Name=HMPREF3052_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09735 GCA_001815685.1|KV821656.1 Protein Homology CDS 13472 14107 . - 0 ID=cds-OFO26585.1;Parent=gene-HMPREF3052_09735;Dbxref=NCBI_GP:OFO26585.1;Name=OFO26585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683252.1;locus_tag=HMPREF3052_09735;product=deoxyguanosine kinase;protein_id=OFO26585.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 14205 14693 . - . ID=gene-HMPREF3052_09740;Name=HMPREF3052_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09740 GCA_001815685.1|KV821656.1 Protein Homology CDS 14205 14693 . - 0 ID=cds-OFO26586.1;Parent=gene-HMPREF3052_09740;Dbxref=NCBI_GP:OFO26586.1;Name=OFO26586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519438.1;locus_tag=HMPREF3052_09740;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=OFO26586.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 14709 15083 . - . ID=gene-HMPREF3052_09745;Name=HMPREF3052_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09745 GCA_001815685.1|KV821656.1 Protein Homology CDS 14709 15083 . - 0 ID=cds-OFO26587.1;Parent=gene-HMPREF3052_09745;Dbxref=NCBI_GP:OFO26587.1;Name=OFO26587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762962.1;locus_tag=HMPREF3052_09745;product=SirB family protein;protein_id=OFO26587.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 15139 15708 . - . ID=gene-HMPREF3052_09750;Name=HMPREF3052_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09750 GCA_001815685.1|KV821656.1 Protein Homology CDS 15139 15708 . - 0 ID=cds-OFO26588.1;Parent=gene-HMPREF3052_09750;Dbxref=NCBI_GP:OFO26588.1;Name=OFO26588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519437.1;locus_tag=HMPREF3052_09750;product=rRNA methyltransferase;protein_id=OFO26588.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 15787 16083 . - . ID=gene-HMPREF3052_09755;Name=HMPREF3052_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09755 GCA_001815685.1|KV821656.1 Protein Homology CDS 15787 16083 . - 0 ID=cds-OFO26610.1;Parent=gene-HMPREF3052_09755;Dbxref=NCBI_GP:OFO26610.1;Name=OFO26610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449257.1;locus_tag=HMPREF3052_09755;product=RNA-binding protein Hfq;protein_id=OFO26610.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 16383 17840 . - . ID=gene-HMPREF3052_09760;Name=HMPREF3052_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09760 GCA_001815685.1|KV821656.1 Protein Homology CDS 16383 17840 . - 0 ID=cds-OFO26589.1;Parent=gene-HMPREF3052_09760;Dbxref=NCBI_GP:OFO26589.1;Name=OFO26589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745900.1;locus_tag=HMPREF3052_09760;product=ribosome biogenesis GTPase Der;protein_id=OFO26589.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 17981 18610 . - . ID=gene-HMPREF3052_09765;Name=HMPREF3052_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09765 GCA_001815685.1|KV821656.1 Protein Homology CDS 17981 18610 . - 0 ID=cds-OFO26590.1;Parent=gene-HMPREF3052_09765;Dbxref=NCBI_GP:OFO26590.1;Name=OFO26590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742838.1;locus_tag=HMPREF3052_09765;product=hypothetical protein;protein_id=OFO26590.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 18611 19906 . - . ID=gene-HMPREF3052_09770;Name=HMPREF3052_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09770 GCA_001815685.1|KV821656.1 Protein Homology CDS 18611 19906 . - 0 ID=cds-OFO26591.1;Parent=gene-HMPREF3052_09770;Dbxref=NCBI_GP:OFO26591.1;Name=OFO26591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZX9.1;locus_tag=HMPREF3052_09770;product=histidine--tRNA ligase;protein_id=OFO26591.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 20043 21140 . - . ID=gene-HMPREF3052_09775;Name=HMPREF3052_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09775 GCA_001815685.1|KV821656.1 Protein Homology CDS 20043 21140 . - 0 ID=cds-OFO26611.1;Parent=gene-HMPREF3052_09775;Dbxref=NCBI_GP:OFO26611.1;Name=OFO26611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002793360.1;locus_tag=HMPREF3052_09775;product=restriction endonuclease;protein_id=OFO26611.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 21158 23218 . - . ID=gene-HMPREF3052_09780;Name=HMPREF3052_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09780 GCA_001815685.1|KV821656.1 Protein Homology CDS 21158 23218 . - 0 ID=cds-OFO26592.1;Parent=gene-HMPREF3052_09780;Dbxref=NCBI_GP:OFO26592.1;Name=OFO26592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683242.1;locus_tag=HMPREF3052_09780;product=restriction endonuclease subunit M;protein_id=OFO26592.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 23561 24484 . + . ID=gene-HMPREF3052_09785;Name=HMPREF3052_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09785 GCA_001815685.1|KV821656.1 Protein Homology CDS 23561 24484 . + 0 ID=cds-OFO26593.1;Parent=gene-HMPREF3052_09785;Dbxref=NCBI_GP:OFO26593.1;Name=OFO26593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217494.1;locus_tag=HMPREF3052_09785;product=pseudouridine synthase;protein_id=OFO26593.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 24554 25591 . - . ID=gene-HMPREF3052_09790;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=HMPREF3052_09790 GCA_001815685.1|KV821656.1 Protein Homology CDS 24554 25591 . - 0 ID=cds-OFO26612.1;Parent=gene-HMPREF3052_09790;Dbxref=NCBI_GP:OFO26612.1;Name=OFO26612.1;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adhP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018499159.1;locus_tag=HMPREF3052_09790;product=zinc-dependent alcohol dehydrogenase;protein_id=OFO26612.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 26041 27516 . + . ID=gene-HMPREF3052_09795;Name=HMPREF3052_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09795 GCA_001815685.1|KV821656.1 Protein Homology CDS 26041 27516 . + 0 ID=cds-OFO26594.1;Parent=gene-HMPREF3052_09795;Dbxref=NCBI_GP:OFO26594.1;Name=OFO26594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173274.1;locus_tag=HMPREF3052_09795;product=aldehyde dehydrogenase;protein_id=OFO26594.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 27617 28078 . + . ID=gene-HMPREF3052_09800;Name=HMPREF3052_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09800 GCA_001815685.1|KV821656.1 GeneMarkS+ CDS 27617 28078 . + 0 ID=cds-OFO26595.1;Parent=gene-HMPREF3052_09800;Dbxref=NCBI_GP:OFO26595.1;Name=OFO26595.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09800;product=hypothetical protein;protein_id=OFO26595.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 28108 28536 . + . ID=gene-HMPREF3052_09805;Name=HMPREF3052_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09805 GCA_001815685.1|KV821656.1 GeneMarkS+ CDS 28108 28536 . + 0 ID=cds-OFO26596.1;Parent=gene-HMPREF3052_09805;Dbxref=NCBI_GP:OFO26596.1;Name=OFO26596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09805;product=hypothetical protein;protein_id=OFO26596.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 28555 28986 . + . ID=gene-HMPREF3052_09810;Name=HMPREF3052_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09810 GCA_001815685.1|KV821656.1 GeneMarkS+ CDS 28555 28986 . + 0 ID=cds-OFO26597.1;Parent=gene-HMPREF3052_09810;Dbxref=NCBI_GP:OFO26597.1;Name=OFO26597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09810;product=hypothetical protein;protein_id=OFO26597.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 29005 29988 . + . ID=gene-HMPREF3052_09815;Name=HMPREF3052_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09815 GCA_001815685.1|KV821656.1 Protein Homology CDS 29005 29988 . + 0 ID=cds-OFO26598.1;Parent=gene-HMPREF3052_09815;Dbxref=NCBI_GP:OFO26598.1;Name=OFO26598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745878.1;locus_tag=HMPREF3052_09815;product=hypothetical protein;protein_id=OFO26598.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 30059 30994 . - . ID=gene-HMPREF3052_09820;Name=HMPREF3052_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09820 GCA_001815685.1|KV821656.1 Protein Homology CDS 30059 30994 . - 0 ID=cds-OFO26599.1;Parent=gene-HMPREF3052_09820;Dbxref=NCBI_GP:OFO26599.1;Name=OFO26599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683150.1;locus_tag=HMPREF3052_09820;product=hypothetical protein;protein_id=OFO26599.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 31013 32713 . - . ID=gene-HMPREF3052_09825;Name=HMPREF3052_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09825 GCA_001815685.1|KV821656.1 Protein Homology CDS 31013 32713 . - 0 ID=cds-OFO26600.1;Parent=gene-HMPREF3052_09825;Dbxref=NCBI_GP:OFO26600.1;Name=OFO26600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581495.1;locus_tag=HMPREF3052_09825;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=OFO26600.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 32816 33337 . - . ID=gene-HMPREF3052_09830;Name=HMPREF3052_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09830 GCA_001815685.1|KV821656.1 Protein Homology CDS 32816 33337 . - 0 ID=cds-OFO26601.1;Parent=gene-HMPREF3052_09830;Dbxref=NCBI_GP:OFO26601.1;Name=OFO26601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745867.1;locus_tag=HMPREF3052_09830;product=hypothetical protein;protein_id=OFO26601.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 33462 34793 . + . ID=gene-HMPREF3052_09835;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=HMPREF3052_09835 GCA_001815685.1|KV821656.1 Protein Homology CDS 33462 34793 . + 0 ID=cds-OFO26602.1;Parent=gene-HMPREF3052_09835;Dbxref=NCBI_GP:OFO26602.1;Name=OFO26602.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754858.1;locus_tag=HMPREF3052_09835;product=metalloprotease PmbA;protein_id=OFO26602.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 34881 36050 . + . ID=gene-HMPREF3052_09840;Name=HMPREF3052_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09840 GCA_001815685.1|KV821656.1 Protein Homology CDS 34881 36050 . + 0 ID=cds-OFO26603.1;Parent=gene-HMPREF3052_09840;Dbxref=NCBI_GP:OFO26603.1;Name=OFO26603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681294.1;locus_tag=HMPREF3052_09840;product=glycosyl transferase;protein_id=OFO26603.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 36205 36714 . + . ID=gene-HMPREF3052_09845;Name=HMPREF3052_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09845 GCA_001815685.1|KV821656.1 Protein Homology CDS 36205 36714 . + 0 ID=cds-OFO26604.1;Parent=gene-HMPREF3052_09845;Dbxref=NCBI_GP:OFO26604.1;Name=OFO26604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779218.1;locus_tag=HMPREF3052_09845;product=DNA-binding protein;protein_id=OFO26604.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 36809 40294 . - . ID=gene-HMPREF3052_09850;Name=HMPREF3052_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09850 GCA_001815685.1|KV821656.1 Protein Homology CDS 36809 40294 . - 0 ID=cds-OFO26605.1;Parent=gene-HMPREF3052_09850;Dbxref=NCBI_GP:OFO26605.1;Name=OFO26605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683181.1;locus_tag=HMPREF3052_09850;product=chromosome segregation protein SMC;protein_id=OFO26605.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 40429 41223 . - . ID=gene-HMPREF3052_09855;Name=HMPREF3052_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09855 GCA_001815685.1|KV821656.1 Protein Homology CDS 40429 41223 . - 0 ID=cds-OFO26606.1;Parent=gene-HMPREF3052_09855;Dbxref=NCBI_GP:OFO26606.1;Name=OFO26606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JY72.1;locus_tag=HMPREF3052_09855;product=thymidylate synthase;protein_id=OFO26606.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 41639 42973 . + . ID=gene-HMPREF3052_09860;Name=HMPREF3052_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09860 GCA_001815685.1|KV821656.1 Protein Homology CDS 41639 42973 . + 0 ID=cds-OFO26607.1;Parent=gene-HMPREF3052_09860;Dbxref=NCBI_GP:OFO26607.1;Name=OFO26607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009617526.1;locus_tag=HMPREF3052_09860;product=glutamate dehydrogenase;protein_id=OFO26607.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 43044 45083 . - . ID=gene-HMPREF3052_09865;Name=HMPREF3052_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09865 GCA_001815685.1|KV821656.1 Protein Homology CDS 43044 45083 . - 0 ID=cds-OFO26608.1;Parent=gene-HMPREF3052_09865;Dbxref=NCBI_GP:OFO26608.1;Name=OFO26608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286145.1;locus_tag=HMPREF3052_09865;product=ATP-dependent DNA helicase RecG;protein_id=OFO26608.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 45184 45618 . - . ID=gene-HMPREF3052_09870;Name=HMPREF3052_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09870 GCA_001815685.1|KV821656.1 Protein Homology CDS 45184 45618 . - 0 ID=cds-OFO26609.1;Parent=gene-HMPREF3052_09870;Dbxref=NCBI_GP:OFO26609.1;Name=OFO26609.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745844.1;locus_tag=HMPREF3052_09870;product=preprotein translocase subunit SecB;protein_id=OFO26609.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 45640 45897 . - . ID=gene-HMPREF3052_09875;Name=HMPREF3052_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09875 GCA_001815685.1|KV821656.1 Protein Homology CDS 45640 45897 . - 0 ID=cds-OFO26613.1;Parent=gene-HMPREF3052_09875;Dbxref=NCBI_GP:OFO26613.1;Name=OFO26613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741129.1;locus_tag=HMPREF3052_09875;product=glutaredoxin;protein_id=OFO26613.1;transl_table=11 GCA_001815685.1|KV821656.1 Genbank gene 46135 47628 . + . ID=gene-HMPREF3052_09880;Name=HMPREF3052_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09880 GCA_001815685.1|KV821656.1 Protein Homology CDS 46135 47628 . + 0 ID=cds-OFO26614.1;Parent=gene-HMPREF3052_09880;Dbxref=NCBI_GP:OFO26614.1;Name=OFO26614.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754268.1;locus_tag=HMPREF3052_09880;product=ribonuclease G;protein_id=OFO26614.1;transl_table=11 ##sequence-region KV821657.1 1 327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821657.1 Genbank region 1 327 . + . ID=KV821657.1:1..327;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821657.1 Genbank pseudogene 1 327 . + . ID=gene-HMPREF3052_09885;Name=HMPREF3052_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09885;pseudo=true GCA_001815685.1|KV821657.1 GeneMarkS+ CDS 1 327 . + 1 ID=cds-HMPREF3052_09885;Parent=gene-HMPREF3052_09885;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09885;product=TspB protein;pseudo=true;transl_table=11 ##sequence-region KV821658.1 1 641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821658.1 Genbank region 1 641 . + . ID=KV821658.1:1..641;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821658.1 Genbank gene 98 463 . - . ID=gene-HMPREF3052_09890;Name=HMPREF3052_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09890 GCA_001815685.1|KV821658.1 GeneMarkS+ CDS 98 463 . - 0 ID=cds-OFO26522.1;Parent=gene-HMPREF3052_09890;Dbxref=NCBI_GP:OFO26522.1;Name=OFO26522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09890;product=hypothetical protein;protein_id=OFO26522.1;transl_table=11 GCA_001815685.1|KV821658.1 Genbank pseudogene 473 641 . - . ID=gene-HMPREF3052_09895;Name=HMPREF3052_09895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09895;pseudo=true GCA_001815685.1|KV821658.1 GeneMarkS+ CDS 473 641 . - 1 ID=cds-HMPREF3052_09895;Parent=gene-HMPREF3052_09895;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09895;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 ##sequence-region KV821659.1 1 5324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821659.1 Genbank region 1 5324 . + . ID=KV821659.1:1..5324;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821659.1 Genbank pseudogene 1 219 . + . ID=gene-HMPREF3052_09900;Name=HMPREF3052_09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09900;pseudo=true GCA_001815685.1|KV821659.1 GeneMarkS+ CDS 1 219 . + 1 ID=cds-HMPREF3052_09900;Parent=gene-HMPREF3052_09900;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09900;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821659.1 Genbank pseudogene 320 2354 . + . ID=gene-HMPREF3052_09905;Name=HMPREF3052_09905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09905;pseudo=true GCA_001815685.1|KV821659.1 GeneMarkS+ CDS 320 2354 . + 1 ID=cds-HMPREF3052_09905;Parent=gene-HMPREF3052_09905;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09905;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821659.1 Genbank gene 2510 5131 . + . ID=gene-HMPREF3052_09910;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=HMPREF3052_09910 GCA_001815685.1|KV821659.1 Protein Homology CDS 2510 5131 . + 0 ID=cds-OFO26399.1;Parent=gene-HMPREF3052_09910;Dbxref=NCBI_GP:OFO26399.1;Name=OFO26399.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521024.1;locus_tag=HMPREF3052_09910;product=aminopeptidase N;protein_id=OFO26399.1;transl_table=11 ##sequence-region KV821660.1 1 66023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821660.1 Genbank region 1 66023 . + . ID=KV821660.1:1..66023;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821660.1 Genbank gene 70 1248 . - . ID=gene-HMPREF3052_09915;Name=HMPREF3052_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09915 GCA_001815685.1|KV821660.1 Protein Homology CDS 70 1248 . - 0 ID=cds-OFO26262.1;Parent=gene-HMPREF3052_09915;Dbxref=NCBI_GP:OFO26262.1;Name=OFO26262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573670.1;locus_tag=HMPREF3052_09915;product=phosphoglycerate kinase;protein_id=OFO26262.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 1442 2791 . + . ID=gene-HMPREF3052_09920;Name=HMPREF3052_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09920 GCA_001815685.1|KV821660.1 Protein Homology CDS 1442 2791 . + 0 ID=cds-OFO26263.1;Parent=gene-HMPREF3052_09920;Dbxref=NCBI_GP:OFO26263.1;Name=OFO26263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747659.1;locus_tag=HMPREF3052_09920;product=peptidase M16;protein_id=OFO26263.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 2850 4148 . + . ID=gene-HMPREF3052_09925;Name=HMPREF3052_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09925 GCA_001815685.1|KV821660.1 Protein Homology CDS 2850 4148 . + 0 ID=cds-OFO26264.1;Parent=gene-HMPREF3052_09925;Dbxref=NCBI_GP:OFO26264.1;Name=OFO26264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686652.1;locus_tag=HMPREF3052_09925;product=peptidase M16;protein_id=OFO26264.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 4396 6234 . - . ID=gene-HMPREF3052_09930;Name=HMPREF3052_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09930 GCA_001815685.1|KV821660.1 Protein Homology CDS 4396 6234 . - 0 ID=cds-OFO26265.1;Parent=gene-HMPREF3052_09930;Dbxref=NCBI_GP:OFO26265.1;Name=OFO26265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201253.1;locus_tag=HMPREF3052_09930;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=OFO26265.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 6400 7773 . - . ID=gene-HMPREF3052_09935;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF3052_09935 GCA_001815685.1|KV821660.1 Protein Homology CDS 6400 7773 . - 0 ID=cds-OFO26266.1;Parent=gene-HMPREF3052_09935;Dbxref=NCBI_GP:OFO26266.1;Name=OFO26266.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687856.1;locus_tag=HMPREF3052_09935;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=OFO26266.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 7872 8156 . - . ID=gene-HMPREF3052_09940;Name=HMPREF3052_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09940 GCA_001815685.1|KV821660.1 Protein Homology CDS 7872 8156 . - 0 ID=cds-OFO26267.1;Parent=gene-HMPREF3052_09940;Dbxref=NCBI_GP:OFO26267.1;Name=OFO26267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175192.1;locus_tag=HMPREF3052_09940;product=spore cortex protein;protein_id=OFO26267.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 8209 8865 . - . ID=gene-HMPREF3052_09945;Name=HMPREF3052_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09945 GCA_001815685.1|KV821660.1 Protein Homology CDS 8209 8865 . - 0 ID=cds-OFO26268.1;Parent=gene-HMPREF3052_09945;Dbxref=NCBI_GP:OFO26268.1;Name=OFO26268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256260.1;locus_tag=HMPREF3052_09945;product=hydrolase;protein_id=OFO26268.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 8930 9931 . + . ID=gene-HMPREF3052_09950;Name=HMPREF3052_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09950 GCA_001815685.1|KV821660.1 Protein Homology CDS 8930 9931 . + 0 ID=cds-OFO26269.1;Parent=gene-HMPREF3052_09950;Dbxref=NCBI_GP:OFO26269.1;Name=OFO26269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216162.1;locus_tag=HMPREF3052_09950;product=ABC transporter substrate-binding protein;protein_id=OFO26269.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 10045 10890 . + . ID=gene-HMPREF3052_09955;Name=HMPREF3052_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09955 GCA_001815685.1|KV821660.1 Protein Homology CDS 10045 10890 . + 0 ID=cds-OFO26270.1;Parent=gene-HMPREF3052_09955;Dbxref=NCBI_GP:OFO26270.1;Name=OFO26270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681205.1;locus_tag=HMPREF3052_09955;product=transporter;protein_id=OFO26270.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 10966 11433 . + . ID=gene-HMPREF3052_09960;Name=HMPREF3052_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09960 GCA_001815685.1|KV821660.1 Protein Homology CDS 10966 11433 . + 0 ID=cds-OFO26271.1;Parent=gene-HMPREF3052_09960;Dbxref=NCBI_GP:OFO26271.1;Name=OFO26271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747688.1;locus_tag=HMPREF3052_09960;product=damage-inducible protein CinA;protein_id=OFO26271.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 11569 12246 . + . ID=gene-HMPREF3052_09965;Name=HMPREF3052_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09965 GCA_001815685.1|KV821660.1 GeneMarkS+ CDS 11569 12246 . + 0 ID=cds-OFO26272.1;Parent=gene-HMPREF3052_09965;Dbxref=NCBI_GP:OFO26272.1;Name=OFO26272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09965;product=hypothetical protein;protein_id=OFO26272.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 12282 13004 . + . ID=gene-HMPREF3052_09970;Name=HMPREF3052_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09970 GCA_001815685.1|KV821660.1 GeneMarkS+ CDS 12282 13004 . + 0 ID=cds-OFO26273.1;Parent=gene-HMPREF3052_09970;Dbxref=NCBI_GP:OFO26273.1;Name=OFO26273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_09970;product=hypothetical protein;protein_id=OFO26273.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank pseudogene 13671 14114 . + . ID=gene-HMPREF3052_09975;Name=HMPREF3052_09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_09975;pseudo=true GCA_001815685.1|KV821660.1 Protein Homology CDS 13671 14114 . + 0 ID=cds-HMPREF3052_09975;Parent=gene-HMPREF3052_09975;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747665.1;locus_tag=HMPREF3052_09975;product=calcium-binding protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 14191 15456 . - . ID=gene-HMPREF3052_09980;Name=HMPREF3052_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09980 GCA_001815685.1|KV821660.1 Protein Homology CDS 14191 15456 . - 0 ID=cds-OFO26274.1;Parent=gene-HMPREF3052_09980;Dbxref=NCBI_GP:OFO26274.1;Name=OFO26274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686509.1;locus_tag=HMPREF3052_09980;product=peroxidase;protein_id=OFO26274.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 15592 16758 . - . ID=gene-HMPREF3052_09985;Name=HMPREF3052_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09985 GCA_001815685.1|KV821660.1 Protein Homology CDS 15592 16758 . - 0 ID=cds-OFO26275.1;Parent=gene-HMPREF3052_09985;Dbxref=NCBI_GP:OFO26275.1;Name=OFO26275.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247121.1;locus_tag=HMPREF3052_09985;product=ferrous iron transporter;protein_id=OFO26275.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 16771 17595 . - . ID=gene-HMPREF3052_09990;Name=HMPREF3052_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09990 GCA_001815685.1|KV821660.1 Protein Homology CDS 16771 17595 . - 0 ID=cds-OFO26276.1;Parent=gene-HMPREF3052_09990;Dbxref=NCBI_GP:OFO26276.1;Name=OFO26276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271751.1;locus_tag=HMPREF3052_09990;product=iron transporter;protein_id=OFO26276.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 17976 19151 . + . ID=gene-HMPREF3052_09995;Name=HMPREF3052_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_09995 GCA_001815685.1|KV821660.1 Protein Homology CDS 17976 19151 . + 0 ID=cds-OFO26277.1;Parent=gene-HMPREF3052_09995;Dbxref=NCBI_GP:OFO26277.1;Name=OFO26277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686626.1;locus_tag=HMPREF3052_09995;product=cytochrome-c peroxidase;protein_id=OFO26277.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 19294 19620 . + . ID=gene-HMPREF3052_10000;Name=HMPREF3052_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10000 GCA_001815685.1|KV821660.1 Protein Homology CDS 19294 19620 . + 0 ID=cds-OFO26278.1;Parent=gene-HMPREF3052_10000;Dbxref=NCBI_GP:OFO26278.1;Name=OFO26278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681186.1;locus_tag=HMPREF3052_10000;product=peptidylprolyl isomerase;protein_id=OFO26278.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 19747 19995 . + . ID=gene-HMPREF3052_10005;Name=HMPREF3052_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10005 GCA_001815685.1|KV821660.1 Protein Homology CDS 19747 19995 . + 0 ID=cds-OFO26279.1;Parent=gene-HMPREF3052_10005;Dbxref=NCBI_GP:OFO26279.1;Name=OFO26279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686612.1;locus_tag=HMPREF3052_10005;product=BolA family transcriptional regulator;protein_id=OFO26279.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 20263 21057 . - . ID=gene-HMPREF3052_10010;Name=HMPREF3052_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10010 GCA_001815685.1|KV821660.1 Protein Homology CDS 20263 21057 . - 0 ID=cds-OFO26179.1;Parent=gene-HMPREF3052_10010;Dbxref=NCBI_GP:OFO26179.1;Name=OFO26179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519214.1;locus_tag=HMPREF3052_10010;product=methyltransferase;protein_id=OFO26179.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 21113 21859 . - . ID=gene-HMPREF3052_10015;Name=HMPREF3052_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10015 GCA_001815685.1|KV821660.1 Protein Homology CDS 21113 21859 . - 0 ID=cds-OFO26180.1;Parent=gene-HMPREF3052_10015;Dbxref=NCBI_GP:OFO26180.1;Name=OFO26180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767784.1;locus_tag=HMPREF3052_10015;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=OFO26180.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 21858 22574 . + . ID=gene-HMPREF3052_10020;Name=HMPREF3052_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10020 GCA_001815685.1|KV821660.1 Protein Homology CDS 21858 22574 . + 0 ID=cds-OFO26181.1;Parent=gene-HMPREF3052_10020;Dbxref=NCBI_GP:OFO26181.1;Name=OFO26181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686547.1;locus_tag=HMPREF3052_10020;product=competence protein;protein_id=OFO26181.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 22639 23103 . + . ID=gene-HMPREF3052_10025;Name=HMPREF3052_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10025 GCA_001815685.1|KV821660.1 Protein Homology CDS 22639 23103 . + 0 ID=cds-OFO26182.1;Parent=gene-HMPREF3052_10025;Dbxref=NCBI_GP:OFO26182.1;Name=OFO26182.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815922.1;locus_tag=HMPREF3052_10025;product=tRNA (cytosine(34)-2'-O)-methyltransferase TrmL;protein_id=OFO26182.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 23152 23871 . + . ID=gene-HMPREF3052_10030;Name=HMPREF3052_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10030 GCA_001815685.1|KV821660.1 Protein Homology CDS 23152 23871 . + 0 ID=cds-OFO26183.1;Parent=gene-HMPREF3052_10030;Dbxref=NCBI_GP:OFO26183.1;Name=OFO26183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519210.1;locus_tag=HMPREF3052_10030;product=hypothetical protein;protein_id=OFO26183.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 23970 24554 . + . ID=gene-HMPREF3052_10035;Name=HMPREF3052_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10035 GCA_001815685.1|KV821660.1 Protein Homology CDS 23970 24554 . + 0 ID=cds-OFO26184.1;Parent=gene-HMPREF3052_10035;Dbxref=NCBI_GP:OFO26184.1;Name=OFO26184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226947.1;locus_tag=HMPREF3052_10035;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=OFO26184.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 24568 24801 . + . ID=gene-HMPREF3052_10040;Name=HMPREF3052_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10040 GCA_001815685.1|KV821660.1 Protein Homology CDS 24568 24801 . + 0 ID=cds-OFO26185.1;Parent=gene-HMPREF3052_10040;Dbxref=NCBI_GP:OFO26185.1;Name=OFO26185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686650.1;locus_tag=HMPREF3052_10040;product=methionine-binding protein;protein_id=OFO26185.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 24856 25563 . + . ID=gene-HMPREF3052_10045;Name=HMPREF3052_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10045 GCA_001815685.1|KV821660.1 Protein Homology CDS 24856 25563 . + 0 ID=cds-OFO26186.1;Parent=gene-HMPREF3052_10045;Dbxref=NCBI_GP:OFO26186.1;Name=OFO26186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519207.1;locus_tag=HMPREF3052_10045;product=hypothetical protein;protein_id=OFO26186.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 25617 25978 . + . ID=gene-HMPREF3052_10050;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF3052_10050 GCA_001815685.1|KV821660.1 cmsearch RNase_P_RNA 25617 25978 . + . ID=rna-HMPREF3052_10050;Parent=gene-HMPREF3052_10050;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_10050;product=RNase P RNA component class A GCA_001815685.1|KV821660.1 cmsearch exon 25617 25978 . + . ID=exon-HMPREF3052_10050-1;Parent=rna-HMPREF3052_10050;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3052_10050;product=RNase P RNA component class A GCA_001815685.1|KV821660.1 Genbank gene 26086 27408 . - . ID=gene-HMPREF3052_10055;Name=HMPREF3052_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10055 GCA_001815685.1|KV821660.1 Protein Homology CDS 26086 27408 . - 0 ID=cds-OFO26187.1;Parent=gene-HMPREF3052_10055;Dbxref=NCBI_GP:OFO26187.1;Name=OFO26187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002260835.1;locus_tag=HMPREF3052_10055;product=murein transglycosylase;protein_id=OFO26187.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 27498 28088 . - . ID=gene-HMPREF3052_10060;Name=HMPREF3052_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10060 GCA_001815685.1|KV821660.1 Protein Homology CDS 27498 28088 . - 0 ID=cds-OFO26188.1;Parent=gene-HMPREF3052_10060;Dbxref=NCBI_GP:OFO26188.1;Name=OFO26188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002223193.1;locus_tag=HMPREF3052_10060;product=RDD family protein;protein_id=OFO26188.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 28262 29377 . + . ID=gene-HMPREF3052_10065;Name=HMPREF3052_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10065 GCA_001815685.1|KV821660.1 Protein Homology CDS 28262 29377 . + 0 ID=cds-OFO26189.1;Parent=gene-HMPREF3052_10065;Dbxref=NCBI_GP:OFO26189.1;Name=OFO26189.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238429.1;locus_tag=HMPREF3052_10065;product=aspartate-semialdehyde dehydrogenase;protein_id=OFO26189.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 29438 30235 . - . ID=gene-HMPREF3052_10070;Name=HMPREF3052_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10070 GCA_001815685.1|KV821660.1 Protein Homology CDS 29438 30235 . - 0 ID=cds-OFO26190.1;Parent=gene-HMPREF3052_10070;Dbxref=NCBI_GP:OFO26190.1;Name=OFO26190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768926.1;locus_tag=HMPREF3052_10070;product=hypothetical protein;protein_id=OFO26190.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 30432 30914 . + . ID=gene-HMPREF3052_10075;Name=HMPREF3052_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10075 GCA_001815685.1|KV821660.1 Protein Homology CDS 30432 30914 . + 0 ID=cds-OFO26191.1;Parent=gene-HMPREF3052_10075;Dbxref=NCBI_GP:OFO26191.1;Name=OFO26191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747727.1;locus_tag=HMPREF3052_10075;product=dihydrofolate reductase;protein_id=OFO26191.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 30997 31263 . - . ID=gene-HMPREF3052_10080;Name=HMPREF3052_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10080 GCA_001815685.1|KV821660.1 Protein Homology CDS 30997 31263 . - 0 ID=cds-OFO26192.1;Parent=gene-HMPREF3052_10080;Dbxref=NCBI_GP:OFO26192.1;Name=OFO26192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753663.1;locus_tag=HMPREF3052_10080;product=hypothetical protein;protein_id=OFO26192.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 31431 31886 . + . ID=gene-HMPREF3052_10085;Name=HMPREF3052_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10085 GCA_001815685.1|KV821660.1 Protein Homology CDS 31431 31886 . + 0 ID=cds-OFO26193.1;Parent=gene-HMPREF3052_10085;Dbxref=NCBI_GP:OFO26193.1;Name=OFO26193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519199.1;locus_tag=HMPREF3052_10085;product=acetyltransferase;protein_id=OFO26193.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 31951 34101 . - . ID=gene-HMPREF3052_10090;Name=HMPREF3052_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10090 GCA_001815685.1|KV821660.1 Protein Homology CDS 31951 34101 . - 0 ID=cds-OFO26194.1;Parent=gene-HMPREF3052_10090;Dbxref=NCBI_GP:OFO26194.1;Name=OFO26194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815907.1;locus_tag=HMPREF3052_10090;product=ATP-dependent DNA helicase DinG;protein_id=OFO26194.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 34202 34426 . + . ID=gene-HMPREF3052_10095;Name=HMPREF3052_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10095 GCA_001815685.1|KV821660.1 Protein Homology CDS 34202 34426 . + 0 ID=cds-OFO26218.1;Parent=gene-HMPREF3052_10095;Dbxref=NCBI_GP:OFO26218.1;Name=OFO26218.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221943.1;locus_tag=HMPREF3052_10095;product=hypothetical protein;protein_id=OFO26218.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 34494 34679 . - . ID=gene-HMPREF3052_10100;Name=HMPREF3052_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10100 GCA_001815685.1|KV821660.1 Protein Homology CDS 34494 34679 . - 0 ID=cds-OFO26195.1;Parent=gene-HMPREF3052_10100;Dbxref=NCBI_GP:OFO26195.1;Name=OFO26195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002254599.1;locus_tag=HMPREF3052_10100;product=hypothetical protein;protein_id=OFO26195.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 34938 37421 . + . ID=gene-HMPREF3052_10105;Name=HMPREF3052_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10105 GCA_001815685.1|KV821660.1 Protein Homology CDS 34938 37421 . + 0 ID=cds-OFO26219.1;Parent=gene-HMPREF3052_10105;Dbxref=NCBI_GP:OFO26219.1;Name=OFO26219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008219522.1;locus_tag=HMPREF3052_10105;product=restriction endonuclease;protein_id=OFO26219.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 37433 38593 . + . ID=gene-HMPREF3052_10110;Name=HMPREF3052_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10110 GCA_001815685.1|KV821660.1 Protein Homology CDS 37433 38593 . + 0 ID=cds-OFO26196.1;Parent=gene-HMPREF3052_10110;Dbxref=NCBI_GP:OFO26196.1;Name=OFO26196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018371555.1;locus_tag=HMPREF3052_10110;product=restriction endonuclease;protein_id=OFO26196.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 38657 39028 . - . ID=gene-HMPREF3052_10115;Name=HMPREF3052_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10115 GCA_001815685.1|KV821660.1 Protein Homology CDS 38657 39028 . - 0 ID=cds-OFO26197.1;Parent=gene-HMPREF3052_10115;Dbxref=NCBI_GP:OFO26197.1;Name=OFO26197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272076.1;locus_tag=HMPREF3052_10115;product=hypothetical protein;protein_id=OFO26197.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 39566 40516 . + . ID=gene-HMPREF3052_10120;Name=HMPREF3052_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10120 GCA_001815685.1|KV821660.1 Protein Homology CDS 39566 40516 . + 0 ID=cds-OFO26198.1;Parent=gene-HMPREF3052_10120;Dbxref=NCBI_GP:OFO26198.1;Name=OFO26198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686545.1;locus_tag=HMPREF3052_10120;product=hydroxyacid dehydrogenase;protein_id=OFO26198.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 40712 42160 . - . ID=gene-HMPREF3052_10125;Name=HMPREF3052_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10125 GCA_001815685.1|KV821660.1 Protein Homology CDS 40712 42160 . - 0 ID=cds-OFO26199.1;Parent=gene-HMPREF3052_10125;Dbxref=NCBI_GP:OFO26199.1;Name=OFO26199.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269816.1;locus_tag=HMPREF3052_10125;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=OFO26199.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 42643 44412 . + . ID=gene-HMPREF3052_10130;Name=HMPREF3052_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10130 GCA_001815685.1|KV821660.1 Protein Homology CDS 42643 44412 . + 0 ID=cds-OFO26200.1;Parent=gene-HMPREF3052_10130;Dbxref=NCBI_GP:OFO26200.1;Name=OFO26200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519194.1;locus_tag=HMPREF3052_10130;product=gamma-glutamyltransferase;protein_id=OFO26200.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 44651 45565 . - . ID=gene-HMPREF3052_10135;Name=HMPREF3052_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10135 GCA_001815685.1|KV821660.1 Protein Homology CDS 44651 45565 . - 0 ID=cds-OFO26201.1;Parent=gene-HMPREF3052_10135;Dbxref=NCBI_GP:OFO26201.1;Name=OFO26201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682358.1;locus_tag=HMPREF3052_10135;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=OFO26201.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 46215 47219 . + . ID=gene-HMPREF3052_10140;Name=HMPREF3052_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10140 GCA_001815685.1|KV821660.1 Protein Homology CDS 46215 47219 . + 0 ID=cds-OFO26202.1;Parent=gene-HMPREF3052_10140;Dbxref=NCBI_GP:OFO26202.1;Name=OFO26202.1;Note=NAD-dependent%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B active during glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766473.1;locus_tag=HMPREF3052_10140;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OFO26202.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 47315 47989 . - . ID=gene-HMPREF3052_10145;Name=HMPREF3052_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10145 GCA_001815685.1|KV821660.1 Protein Homology CDS 47315 47989 . - 0 ID=cds-OFO26203.1;Parent=gene-HMPREF3052_10145;Dbxref=NCBI_GP:OFO26203.1;Name=OFO26203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519192.1;locus_tag=HMPREF3052_10145;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=OFO26203.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 48160 48795 . + . ID=gene-HMPREF3052_10150;Name=HMPREF3052_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10150 GCA_001815685.1|KV821660.1 Protein Homology CDS 48160 48795 . + 0 ID=cds-OFO26204.1;Parent=gene-HMPREF3052_10150;Dbxref=NCBI_GP:OFO26204.1;Name=OFO26204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220020.1;locus_tag=HMPREF3052_10150;product=nicotinamidase;protein_id=OFO26204.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 48842 49810 . + . ID=gene-HMPREF3052_10155;Name=HMPREF3052_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10155 GCA_001815685.1|KV821660.1 Protein Homology CDS 48842 49810 . + 0 ID=cds-OFO26205.1;Parent=gene-HMPREF3052_10155;Dbxref=NCBI_GP:OFO26205.1;Name=OFO26205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779621.1;locus_tag=HMPREF3052_10155;product=lipopolysaccharide heptosyltransferase I;protein_id=OFO26205.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 49995 50744 . + . ID=gene-HMPREF3052_10160;Name=HMPREF3052_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10160 GCA_001815685.1|KV821660.1 Protein Homology CDS 49995 50744 . + 0 ID=cds-OFO26206.1;Parent=gene-HMPREF3052_10160;Dbxref=NCBI_GP:OFO26206.1;Name=OFO26206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519189.1;locus_tag=HMPREF3052_10160;product=EtfB protein;protein_id=OFO26206.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 50755 51687 . + . ID=gene-HMPREF3052_10165;Name=HMPREF3052_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10165 GCA_001815685.1|KV821660.1 Protein Homology CDS 50755 51687 . + 0 ID=cds-OFO26207.1;Parent=gene-HMPREF3052_10165;Dbxref=NCBI_GP:OFO26207.1;Name=OFO26207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002249544.1;locus_tag=HMPREF3052_10165;product=electron transfer flavoprotein subunit beta;protein_id=OFO26207.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 51749 52360 . + . ID=gene-HMPREF3052_10170;Name=HMPREF3052_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10170 GCA_001815685.1|KV821660.1 Protein Homology CDS 51749 52360 . + 0 ID=cds-OFO26208.1;Parent=gene-HMPREF3052_10170;Dbxref=NCBI_GP:OFO26208.1;Name=OFO26208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224205.1;locus_tag=HMPREF3052_10170;product=thymidylate synthase;protein_id=OFO26208.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 52415 52726 . - . ID=gene-HMPREF3052_10175;Name=HMPREF3052_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10175 GCA_001815685.1|KV821660.1 Protein Homology CDS 52415 52726 . - 0 ID=cds-OFO26209.1;Parent=gene-HMPREF3052_10175;Dbxref=NCBI_GP:OFO26209.1;Name=OFO26209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747758.1;locus_tag=HMPREF3052_10175;product=hypothetical protein;protein_id=OFO26209.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 52866 54137 . + . ID=gene-HMPREF3052_10180;Name=HMPREF3052_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10180 GCA_001815685.1|KV821660.1 Protein Homology CDS 52866 54137 . + 0 ID=cds-OFO26210.1;Parent=gene-HMPREF3052_10180;Dbxref=NCBI_GP:OFO26210.1;Name=OFO26210.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012222175.1;locus_tag=HMPREF3052_10180;product=phosphoribosylamine--glycine ligase;protein_id=OFO26210.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 54209 54778 . + . ID=gene-HMPREF3052_10185;Name=HMPREF3052_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10185 GCA_001815685.1|KV821660.1 Protein Homology CDS 54209 54778 . + 0 ID=cds-OFO26220.1;Parent=gene-HMPREF3052_10185;Dbxref=NCBI_GP:OFO26220.1;Name=OFO26220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312572.1;locus_tag=HMPREF3052_10185;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=OFO26220.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 55164 55604 . - . ID=gene-HMPREF3052_10190;Name=HMPREF3052_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10190 GCA_001815685.1|KV821660.1 Protein Homology CDS 55164 55604 . - 0 ID=cds-OFO26211.1;Parent=gene-HMPREF3052_10190;Dbxref=NCBI_GP:OFO26211.1;Name=OFO26211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686580.1;locus_tag=HMPREF3052_10190;product=hypothetical protein;protein_id=OFO26211.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 55815 57185 . + . ID=gene-HMPREF3052_10195;Name=HMPREF3052_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10195 GCA_001815685.1|KV821660.1 Protein Homology CDS 55815 57185 . + 0 ID=cds-OFO26212.1;Parent=gene-HMPREF3052_10195;Dbxref=NCBI_GP:OFO26212.1;Name=OFO26212.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245843.1;locus_tag=HMPREF3052_10195;product=adenylosuccinate lyase;protein_id=OFO26212.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 57316 58884 . - . ID=gene-HMPREF3052_10200;Name=HMPREF3052_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10200 GCA_001815685.1|KV821660.1 Protein Homology CDS 57316 58884 . - 0 ID=cds-OFO26213.1;Parent=gene-HMPREF3052_10200;Dbxref=NCBI_GP:OFO26213.1;Name=OFO26213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678380.1;locus_tag=HMPREF3052_10200;product=trifunctional thioredoxin/methionine sulfoxide reductase A/B protein;protein_id=OFO26213.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 59255 60562 . + . ID=gene-HMPREF3052_10205;Name=HMPREF3052_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10205 GCA_001815685.1|KV821660.1 Protein Homology CDS 59255 60562 . + 0 ID=cds-OFO26221.1;Parent=gene-HMPREF3052_10205;Dbxref=NCBI_GP:OFO26221.1;Name=OFO26221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O30391.1;locus_tag=HMPREF3052_10205;product=signal recognition particle-docking protein FtsY;protein_id=OFO26221.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 60736 61962 . - . ID=gene-HMPREF3052_10210;Name=HMPREF3052_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10210 GCA_001815685.1|KV821660.1 Protein Homology CDS 60736 61962 . - 0 ID=cds-OFO26214.1;Parent=gene-HMPREF3052_10210;Dbxref=NCBI_GP:OFO26214.1;Name=OFO26214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768353.1;locus_tag=HMPREF3052_10210;product=MFS transporter;protein_id=OFO26214.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 62079 62477 . - . ID=gene-HMPREF3052_10215;Name=HMPREF3052_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10215 GCA_001815685.1|KV821660.1 Protein Homology CDS 62079 62477 . - 0 ID=cds-OFO26215.1;Parent=gene-HMPREF3052_10215;Dbxref=NCBI_GP:OFO26215.1;Name=OFO26215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519722.1;locus_tag=HMPREF3052_10215;product=extensin;protein_id=OFO26215.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 62807 64852 . - . ID=gene-HMPREF3052_10220;Name=HMPREF3052_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10220 GCA_001815685.1|KV821660.1 Protein Homology CDS 62807 64852 . - 0 ID=cds-OFO26216.1;Parent=gene-HMPREF3052_10220;Dbxref=NCBI_GP:OFO26216.1;Name=OFO26216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686568.1;locus_tag=HMPREF3052_10220;product=vibriobactin receptor;protein_id=OFO26216.1;transl_table=11 GCA_001815685.1|KV821660.1 Genbank gene 65257 65925 . + . ID=gene-HMPREF3052_10225;Name=HMPREF3052_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10225 GCA_001815685.1|KV821660.1 Protein Homology CDS 65257 65925 . + 0 ID=cds-OFO26217.1;Parent=gene-HMPREF3052_10225;Dbxref=NCBI_GP:OFO26217.1;Name=OFO26217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686709.1;locus_tag=HMPREF3052_10225;product=TetR family transcriptional regulator;protein_id=OFO26217.1;transl_table=11 ##sequence-region KV821661.1 1 219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821661.1 Genbank region 1 219 . + . ID=KV821661.1:1..219;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821662.1 1 2974 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821662.1 Genbank region 1 2974 . + . ID=KV821662.1:1..2974;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821662.1 Genbank pseudogene 1 856 . + . ID=gene-HMPREF3052_10230;Name=HMPREF3052_10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10230;pseudo=true GCA_001815685.1|KV821662.1 GeneMarkS+ CDS 1 856 . + 1 ID=cds-HMPREF3052_10230;Parent=gene-HMPREF3052_10230;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_10230;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821662.1 Genbank gene 1096 2055 . - . ID=gene-HMPREF3052_10235;Name=HMPREF3052_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10235 GCA_001815685.1|KV821662.1 Protein Homology CDS 1096 2055 . - 0 ID=cds-OFO26167.1;Parent=gene-HMPREF3052_10235;Dbxref=NCBI_GP:OFO26167.1;Name=OFO26167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680050.1;locus_tag=HMPREF3052_10235;product=tRNA dihydrouridine synthase DusA;protein_id=OFO26167.1;transl_table=11 GCA_001815685.1|KV821662.1 Genbank gene 2318 2938 . + . ID=gene-HMPREF3052_10240;Name=HMPREF3052_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10240 GCA_001815685.1|KV821662.1 Protein Homology CDS 2318 2938 . + 0 ID=cds-OFO26166.1;Parent=gene-HMPREF3052_10240;Dbxref=NCBI_GP:OFO26166.1;Name=OFO26166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680049.1;locus_tag=HMPREF3052_10240;product=threonylcarbamoyl-AMP synthase;protein_id=OFO26166.1;transl_table=11 ##sequence-region KV821663.1 1 2784 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821663.1 Genbank region 1 2784 . + . ID=KV821663.1:1..2784;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821663.1 Genbank gene 236 2299 . - . ID=gene-HMPREF3052_10245;Name=HMPREF3052_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10245 GCA_001815685.1|KV821663.1 GeneMarkS+ CDS 236 2299 . - 0 ID=cds-OFO26010.1;Parent=gene-HMPREF3052_10245;Dbxref=NCBI_GP:OFO26010.1;Name=OFO26010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_10245;product=hypothetical protein;protein_id=OFO26010.1;transl_table=11 GCA_001815685.1|KV821663.1 Genbank pseudogene 2508 2784 . - . ID=gene-HMPREF3052_10250;Name=HMPREF3052_10250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10250;pseudo=true GCA_001815685.1|KV821663.1 Protein Homology CDS 2508 2784 . - 1 ID=cds-HMPREF3052_10250;Parent=gene-HMPREF3052_10250;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684693.1;locus_tag=HMPREF3052_10250;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV821664.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821664.1 Genbank region 1 240 . + . ID=KV821664.1:1..240;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821664.1 Genbank pseudogene 1 142 . + . ID=gene-HMPREF3052_10255;Name=HMPREF3052_10255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10255;pseudo=true GCA_001815685.1|KV821664.1 GeneMarkS+ CDS 1 142 . + 1 ID=cds-HMPREF3052_10255;Parent=gene-HMPREF3052_10255;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_10255;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 ##sequence-region KV821665.1 1 256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821665.1 Genbank region 1 256 . + . ID=KV821665.1:1..256;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821665.1 Genbank pseudogene 1 250 . + . ID=gene-HMPREF3052_10260;Name=HMPREF3052_10260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10260;pseudo=true GCA_001815685.1|KV821665.1 GeneMarkS+ CDS 1 250 . + 1 ID=cds-HMPREF3052_10260;Parent=gene-HMPREF3052_10260;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_10260;product=terminase;pseudo=true;transl_table=11 ##sequence-region KV821666.1 1 25264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821666.1 Genbank region 1 25264 . + . ID=KV821666.1:1..25264;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821666.1 Genbank gene 379 687 . - . ID=gene-HMPREF3052_10265;Name=HMPREF3052_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10265 GCA_001815685.1|KV821666.1 Protein Homology CDS 379 687 . - 0 ID=cds-OFO25014.1;Parent=gene-HMPREF3052_10265;Dbxref=NCBI_GP:OFO25014.1;Name=OFO25014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002246011.1;locus_tag=HMPREF3052_10265;product=hypothetical protein;protein_id=OFO25014.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 1228 1446 . - . ID=gene-HMPREF3052_10270;Name=HMPREF3052_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10270 GCA_001815685.1|KV821666.1 Protein Homology CDS 1228 1446 . - 0 ID=cds-OFO24977.1;Parent=gene-HMPREF3052_10270;Dbxref=NCBI_GP:OFO24977.1;Name=OFO24977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449108.1;locus_tag=HMPREF3052_10270;product=hypothetical protein;protein_id=OFO24977.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 1527 1724 . - . ID=gene-HMPREF3052_10275;Name=HMPREF3052_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10275 GCA_001815685.1|KV821666.1 Protein Homology CDS 1527 1724 . - 0 ID=cds-OFO24978.1;Parent=gene-HMPREF3052_10275;Dbxref=NCBI_GP:OFO24978.1;Name=OFO24978.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780477.1;locus_tag=HMPREF3052_10275;product=hypothetical protein;protein_id=OFO24978.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 1728 2024 . - . ID=gene-HMPREF3052_10280;Name=HMPREF3052_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10280 GCA_001815685.1|KV821666.1 Protein Homology CDS 1728 2024 . - 0 ID=cds-OFO24979.1;Parent=gene-HMPREF3052_10280;Dbxref=NCBI_GP:OFO24979.1;Name=OFO24979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464499.1;locus_tag=HMPREF3052_10280;product=hypothetical protein;protein_id=OFO24979.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 2078 3403 . - . ID=gene-HMPREF3052_10285;Name=HMPREF3052_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10285 GCA_001815685.1|KV821666.1 Protein Homology CDS 2078 3403 . - 0 ID=cds-OFO24980.1;Parent=gene-HMPREF3052_10285;Dbxref=NCBI_GP:OFO24980.1;Name=OFO24980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215773.1;locus_tag=HMPREF3052_10285;product=replication initiation factor;protein_id=OFO24980.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 3400 3618 . - . ID=gene-HMPREF3052_10290;Name=HMPREF3052_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10290 GCA_001815685.1|KV821666.1 Protein Homology CDS 3400 3618 . - 0 ID=cds-OFO24981.1;Parent=gene-HMPREF3052_10290;Dbxref=NCBI_GP:OFO24981.1;Name=OFO24981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685209.1;locus_tag=HMPREF3052_10290;product=hypothetical protein;protein_id=OFO24981.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 3741 4997 . - . ID=gene-HMPREF3052_10295;Name=HMPREF3052_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10295 GCA_001815685.1|KV821666.1 Protein Homology CDS 3741 4997 . - 0 ID=cds-OFO24982.1;Parent=gene-HMPREF3052_10295;Dbxref=NCBI_GP:OFO24982.1;Name=OFO24982.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581714.1;locus_tag=HMPREF3052_10295;product=D-amino acid dehydrogenase small subunit;protein_id=OFO24982.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 5075 6466 . - . ID=gene-HMPREF3052_10300;Name=HMPREF3052_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10300 GCA_001815685.1|KV821666.1 Protein Homology CDS 5075 6466 . - 0 ID=cds-OFO24983.1;Parent=gene-HMPREF3052_10300;Dbxref=NCBI_GP:OFO24983.1;Name=OFO24983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215475.1;locus_tag=HMPREF3052_10300;product=transporter;protein_id=OFO24983.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 6837 7694 . - . ID=gene-HMPREF3052_10305;Name=HMPREF3052_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10305 GCA_001815685.1|KV821666.1 Protein Homology CDS 6837 7694 . - 0 ID=cds-OFO24984.1;Parent=gene-HMPREF3052_10305;Dbxref=NCBI_GP:OFO24984.1;Name=OFO24984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520216.1;locus_tag=HMPREF3052_10305;product=glutathione synthetase;protein_id=OFO24984.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 7815 9056 . + . ID=gene-HMPREF3052_10310;Name=HMPREF3052_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10310 GCA_001815685.1|KV821666.1 Protein Homology CDS 7815 9056 . + 0 ID=cds-OFO24985.1;Parent=gene-HMPREF3052_10310;Dbxref=NCBI_GP:OFO24985.1;Name=OFO24985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749322.1;locus_tag=HMPREF3052_10310;product=deoxyribonuclease;protein_id=OFO24985.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 9204 9923 . + . ID=gene-HMPREF3052_10315;Name=HMPREF3052_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10315 GCA_001815685.1|KV821666.1 Protein Homology CDS 9204 9923 . + 0 ID=cds-OFO24986.1;Parent=gene-HMPREF3052_10315;Dbxref=NCBI_GP:OFO24986.1;Name=OFO24986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749320.1;locus_tag=HMPREF3052_10315;product=septum site-determining protein MinC;protein_id=OFO24986.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 9950 10765 . + . ID=gene-HMPREF3052_10320;Name=HMPREF3052_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10320 GCA_001815685.1|KV821666.1 Protein Homology CDS 9950 10765 . + 0 ID=cds-OFO24987.1;Parent=gene-HMPREF3052_10320;Dbxref=NCBI_GP:OFO24987.1;Name=OFO24987.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175065.1;locus_tag=HMPREF3052_10320;product=septum site-determining protein MinD;protein_id=OFO24987.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 10769 11032 . + . ID=gene-HMPREF3052_10325;Name=HMPREF3052_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10325 GCA_001815685.1|KV821666.1 Protein Homology CDS 10769 11032 . + 0 ID=cds-OFO24988.1;Parent=gene-HMPREF3052_10325;Dbxref=NCBI_GP:OFO24988.1;Name=OFO24988.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680625.1;locus_tag=HMPREF3052_10325;product=cell division topological specificity factor MinE;protein_id=OFO24988.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 11036 11956 . + . ID=gene-HMPREF3052_10330;Name=HMPREF3052_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10330 GCA_001815685.1|KV821666.1 Protein Homology CDS 11036 11956 . + 0 ID=cds-OFO24989.1;Parent=gene-HMPREF3052_10330;Dbxref=NCBI_GP:OFO24989.1;Name=OFO24989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749313.1;locus_tag=HMPREF3052_10330;product=LysR family transcriptional regulator;protein_id=OFO24989.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 12020 12247 . - . ID=gene-HMPREF3052_10335;Name=HMPREF3052_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10335 GCA_001815685.1|KV821666.1 Protein Homology CDS 12020 12247 . - 0 ID=cds-OFO24990.1;Parent=gene-HMPREF3052_10335;Dbxref=NCBI_GP:OFO24990.1;Name=OFO24990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680627.1;locus_tag=HMPREF3052_10335;product=hypothetical protein;protein_id=OFO24990.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 12487 12936 . + . ID=gene-HMPREF3052_10340;Name=HMPREF3052_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10340 GCA_001815685.1|KV821666.1 Protein Homology CDS 12487 12936 . + 0 ID=cds-OFO24991.1;Parent=gene-HMPREF3052_10340;Dbxref=NCBI_GP:OFO24991.1;Name=OFO24991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221764.1;locus_tag=HMPREF3052_10340;product=hypothetical protein;protein_id=OFO24991.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 12968 13942 . + . ID=gene-HMPREF3052_10345;Name=HMPREF3052_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10345 GCA_001815685.1|KV821666.1 Protein Homology CDS 12968 13942 . + 0 ID=cds-OFO24992.1;Parent=gene-HMPREF3052_10345;Dbxref=NCBI_GP:OFO24992.1;Name=OFO24992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684768.1;locus_tag=HMPREF3052_10345;product=hypothetical protein;protein_id=OFO24992.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 14132 14509 . - . ID=gene-HMPREF3052_10350;Name=HMPREF3052_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10350 GCA_001815685.1|KV821666.1 Protein Homology CDS 14132 14509 . - 0 ID=cds-OFO24888.1;Parent=gene-HMPREF3052_10350;Dbxref=NCBI_GP:OFO24888.1;Name=OFO24888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674689.1;locus_tag=HMPREF3052_10350;product=hypothetical protein;protein_id=OFO24888.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 14692 14767 . + . ID=gene-HMPREF3052_10355;Name=HMPREF3052_10355;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_10355 GCA_001815685.1|KV821666.1 tRNAscan-SE tRNA 14692 14767 . + . ID=rna-HMPREF3052_10355;Parent=gene-HMPREF3052_10355;anticodon=(pos:14725..14727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10355;product=tRNA-Lys GCA_001815685.1|KV821666.1 tRNAscan-SE exon 14692 14767 . + . ID=exon-HMPREF3052_10355-1;Parent=rna-HMPREF3052_10355;anticodon=(pos:14725..14727);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10355;product=tRNA-Lys GCA_001815685.1|KV821666.1 Genbank gene 15026 16468 . + . ID=gene-HMPREF3052_10360;Name=HMPREF3052_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10360 GCA_001815685.1|KV821666.1 Protein Homology CDS 15026 16468 . + 0 ID=cds-OFO24889.1;Parent=gene-HMPREF3052_10360;Dbxref=NCBI_GP:OFO24889.1;Name=OFO24889.1;Note=NAD-linked;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449564.1;locus_tag=HMPREF3052_10360;product=aldehyde dehydrogenase;protein_id=OFO24889.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 16648 18159 . + . ID=gene-HMPREF3052_10365;Name=HMPREF3052_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10365 GCA_001815685.1|KV821666.1 Protein Homology CDS 16648 18159 . + 0 ID=cds-OFO24890.1;Parent=gene-HMPREF3052_10365;Dbxref=NCBI_GP:OFO24890.1;Name=OFO24890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313040.1;locus_tag=HMPREF3052_10365;product=lysine--tRNA ligase;protein_id=OFO24890.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 18422 19846 . + . ID=gene-HMPREF3052_10370;Name=HMPREF3052_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10370 GCA_001815685.1|KV821666.1 Protein Homology CDS 18422 19846 . + 0 ID=cds-OFO24891.1;Parent=gene-HMPREF3052_10370;Dbxref=NCBI_GP:OFO24891.1;Name=OFO24891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749304.1;locus_tag=HMPREF3052_10370;product=sodium:alanine symporter;protein_id=OFO24891.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 20116 23361 . + . ID=gene-HMPREF3052_10375;Name=HMPREF3052_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10375 GCA_001815685.1|KV821666.1 Protein Homology CDS 20116 23361 . + 0 ID=cds-OFO24892.1;Parent=gene-HMPREF3052_10375;Dbxref=NCBI_GP:OFO24892.1;Name=OFO24892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742773.1;locus_tag=HMPREF3052_10375;product=type II CRISPR RNA-guided endonuclease Cas9;protein_id=OFO24892.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 23427 24341 . + . ID=gene-HMPREF3052_10380;Name=HMPREF3052_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10380 GCA_001815685.1|KV821666.1 Protein Homology CDS 23427 24341 . + 0 ID=cds-OFO24893.1;Parent=gene-HMPREF3052_10380;Dbxref=NCBI_GP:OFO24893.1;Name=OFO24893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582247.1;locus_tag=HMPREF3052_10380;product=subtype II CRISPR-associated endonuclease Cas1;protein_id=OFO24893.1;transl_table=11 GCA_001815685.1|KV821666.1 Genbank gene 24334 24660 . + . ID=gene-HMPREF3052_10385;Name=HMPREF3052_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10385 GCA_001815685.1|KV821666.1 Protein Homology CDS 24334 24660 . + 0 ID=cds-OFO24894.1;Parent=gene-HMPREF3052_10385;Dbxref=NCBI_GP:OFO24894.1;Name=OFO24894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991279.1;locus_tag=HMPREF3052_10385;product=CRISPR-associated endonuclease Cas2;protein_id=OFO24894.1;transl_table=11 ##sequence-region KV821667.1 1 438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821667.1 Genbank region 1 438 . + . ID=KV821667.1:1..438;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821668.1 1 75122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821668.1 Genbank region 1 75122 . + . ID=KV821668.1:1..75122;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821668.1 Genbank gene 387 2594 . - . ID=gene-HMPREF3052_10390;Name=HMPREF3052_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10390 GCA_001815685.1|KV821668.1 Protein Homology CDS 387 2594 . - 0 ID=cds-OFO24761.1;Parent=gene-HMPREF3052_10390;Dbxref=NCBI_GP:OFO24761.1;Name=OFO24761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215598.1;locus_tag=HMPREF3052_10390;product=DNA helicase II;protein_id=OFO24761.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 2694 3722 . - . ID=gene-HMPREF3052_10395;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=HMPREF3052_10395 GCA_001815685.1|KV821668.1 Protein Homology CDS 2694 3722 . - 0 ID=cds-OFO24762.1;Parent=gene-HMPREF3052_10395;Dbxref=NCBI_GP:OFO24762.1;Name=OFO24762.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748138.1;locus_tag=HMPREF3052_10395;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OFO24762.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 4551 6032 . + . ID=gene-HMPREF3052_10400;Name=HMPREF3052_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10400 GCA_001815685.1|KV821668.1 Protein Homology CDS 4551 6032 . + 0 ID=cds-OFO24763.1;Parent=gene-HMPREF3052_10400;Dbxref=NCBI_GP:OFO24763.1;Name=OFO24763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682617.1;locus_tag=HMPREF3052_10400;product=transporter;protein_id=OFO24763.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 6481 7953 . + . ID=gene-HMPREF3052_10405;Name=HMPREF3052_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10405 GCA_001815685.1|KV821668.1 Protein Homology CDS 6481 7953 . + 0 ID=cds-OFO24635.1;Parent=gene-HMPREF3052_10405;Dbxref=NCBI_GP:OFO24635.1;Name=OFO24635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225872.1;locus_tag=HMPREF3052_10405;product=magnesium transporter;protein_id=OFO24635.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 8076 8699 . + . ID=gene-HMPREF3052_10410;Name=HMPREF3052_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10410 GCA_001815685.1|KV821668.1 Protein Homology CDS 8076 8699 . + 0 ID=cds-OFO24636.1;Parent=gene-HMPREF3052_10410;Dbxref=NCBI_GP:OFO24636.1;Name=OFO24636.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776318.1;locus_tag=HMPREF3052_10410;product=thiamine phosphate synthase;protein_id=OFO24636.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 8806 9000 . + . ID=gene-HMPREF3052_10415;Name=HMPREF3052_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10415 GCA_001815685.1|KV821668.1 Protein Homology CDS 8806 9000 . + 0 ID=cds-OFO24637.1;Parent=gene-HMPREF3052_10415;Dbxref=NCBI_GP:OFO24637.1;Name=OFO24637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273559.1;locus_tag=HMPREF3052_10415;product=thiamine biosynthesis protein ThiS;protein_id=OFO24637.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 9060 9848 . + . ID=gene-HMPREF3052_10420;Name=HMPREF3052_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10420 GCA_001815685.1|KV821668.1 Protein Homology CDS 9060 9848 . + 0 ID=cds-OFO24638.1;Parent=gene-HMPREF3052_10420;Dbxref=NCBI_GP:OFO24638.1;Name=OFO24638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218200.1;locus_tag=HMPREF3052_10420;product=thiazole synthase;protein_id=OFO24638.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 9919 10680 . - . ID=gene-HMPREF3052_10425;Name=HMPREF3052_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10425 GCA_001815685.1|KV821668.1 Protein Homology CDS 9919 10680 . - 0 ID=cds-OFO24639.1;Parent=gene-HMPREF3052_10425;Dbxref=NCBI_GP:OFO24639.1;Name=OFO24639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684620.1;locus_tag=HMPREF3052_10425;product=uracil-DNA glycosylase;protein_id=OFO24639.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 10674 11117 . - . ID=gene-HMPREF3052_10430;Name=HMPREF3052_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10430 GCA_001815685.1|KV821668.1 Protein Homology CDS 10674 11117 . - 0 ID=cds-OFO24640.1;Parent=gene-HMPREF3052_10430;Dbxref=NCBI_GP:OFO24640.1;Name=OFO24640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003702201.1;locus_tag=HMPREF3052_10430;product=ribosomal-protein-alanine N-acetyltransferase RimI;protein_id=OFO24640.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 11114 11788 . - . ID=gene-HMPREF3052_10435;Name=HMPREF3052_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10435 GCA_001815685.1|KV821668.1 Protein Homology CDS 11114 11788 . - 0 ID=cds-OFO24641.1;Parent=gene-HMPREF3052_10435;Dbxref=NCBI_GP:OFO24641.1;Name=OFO24641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248775.1;locus_tag=HMPREF3052_10435;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=OFO24641.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 11951 12625 . - . ID=gene-HMPREF3052_10440;Name=HMPREF3052_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10440 GCA_001815685.1|KV821668.1 Protein Homology CDS 11951 12625 . - 0 ID=cds-OFO24642.1;Parent=gene-HMPREF3052_10440;Dbxref=NCBI_GP:OFO24642.1;Name=OFO24642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682634.1;locus_tag=HMPREF3052_10440;product=glutathione S-transferase;protein_id=OFO24642.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 12634 13029 . - . ID=gene-HMPREF3052_10445;Name=HMPREF3052_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10445 GCA_001815685.1|KV821668.1 Protein Homology CDS 12634 13029 . - 0 ID=cds-OFO24643.1;Parent=gene-HMPREF3052_10445;Dbxref=NCBI_GP:OFO24643.1;Name=OFO24643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518957.1;locus_tag=HMPREF3052_10445;product=hypothetical protein;protein_id=OFO24643.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 13030 14196 . - . ID=gene-HMPREF3052_10450;Name=HMPREF3052_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10450 GCA_001815685.1|KV821668.1 Protein Homology CDS 13030 14196 . - 0 ID=cds-OFO24644.1;Parent=gene-HMPREF3052_10450;Dbxref=NCBI_GP:OFO24644.1;Name=OFO24644.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B this condensing enzyme differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748169.1;locus_tag=HMPREF3052_10450;product=3-oxoacyl-ACP synthase;protein_id=OFO24644.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 14216 14461 . - . ID=gene-HMPREF3052_10455;Name=HMPREF3052_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10455 GCA_001815685.1|KV821668.1 Protein Homology CDS 14216 14461 . - 0 ID=cds-OFO24645.1;Parent=gene-HMPREF3052_10455;Dbxref=NCBI_GP:OFO24645.1;Name=OFO24645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682639.1;locus_tag=HMPREF3052_10455;product=hypothetical protein;protein_id=OFO24645.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 14577 14996 . - . ID=gene-HMPREF3052_10460;Name=HMPREF3052_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10460 GCA_001815685.1|KV821668.1 Protein Homology CDS 14577 14996 . - 0 ID=cds-OFO24646.1;Parent=gene-HMPREF3052_10460;Dbxref=NCBI_GP:OFO24646.1;Name=OFO24646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684623.1;locus_tag=HMPREF3052_10460;product=hypothetical protein;protein_id=OFO24646.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 15034 15942 . - . ID=gene-HMPREF3052_10465;Name=HMPREF3052_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10465 GCA_001815685.1|KV821668.1 Protein Homology CDS 15034 15942 . - 0 ID=cds-OFO24647.1;Parent=gene-HMPREF3052_10465;Dbxref=NCBI_GP:OFO24647.1;Name=OFO24647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767187.1;locus_tag=HMPREF3052_10465;product=dialkylrecorsinol condensing enzyme;protein_id=OFO24647.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 16252 16327 . - . ID=gene-HMPREF3052_10470;Name=HMPREF3052_10470;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_10470 GCA_001815685.1|KV821668.1 tRNAscan-SE tRNA 16252 16327 . - . ID=rna-HMPREF3052_10470;Parent=gene-HMPREF3052_10470;anticodon=(pos:complement(16292..16294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10470;product=tRNA-Phe GCA_001815685.1|KV821668.1 tRNAscan-SE exon 16252 16327 . - . ID=exon-HMPREF3052_10470-1;Parent=rna-HMPREF3052_10470;anticodon=(pos:complement(16292..16294));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10470;product=tRNA-Phe GCA_001815685.1|KV821668.1 Genbank gene 16532 17092 . + . ID=gene-HMPREF3052_10475;Name=HMPREF3052_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10475 GCA_001815685.1|KV821668.1 Protein Homology CDS 16532 17092 . + 0 ID=cds-OFO24648.1;Parent=gene-HMPREF3052_10475;Dbxref=NCBI_GP:OFO24648.1;Name=OFO24648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779520.1;locus_tag=HMPREF3052_10475;product=hypothetical protein;protein_id=OFO24648.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 17140 17652 . - . ID=gene-HMPREF3052_10480;Name=HMPREF3052_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10480 GCA_001815685.1|KV821668.1 Protein Homology CDS 17140 17652 . - 0 ID=cds-OFO24649.1;Parent=gene-HMPREF3052_10480;Dbxref=NCBI_GP:OFO24649.1;Name=OFO24649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682645.1;locus_tag=HMPREF3052_10480;product=pantetheine-phosphate adenylyltransferase;protein_id=OFO24649.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 17887 18573 . - . ID=gene-HMPREF3052_10485;Name=HMPREF3052_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10485 GCA_001815685.1|KV821668.1 Protein Homology CDS 17887 18573 . - 0 ID=cds-OFO24549.1;Parent=gene-HMPREF3052_10485;Dbxref=NCBI_GP:OFO24549.1;Name=OFO24549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682646.1;locus_tag=HMPREF3052_10485;product=hypothetical protein;protein_id=OFO24549.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 18743 19018 . - . ID=gene-HMPREF3052_10490;Name=HMPREF3052_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10490 GCA_001815685.1|KV821668.1 Protein Homology CDS 18743 19018 . - 0 ID=cds-OFO24550.1;Parent=gene-HMPREF3052_10490;Dbxref=NCBI_GP:OFO24550.1;Name=OFO24550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174919.1;locus_tag=HMPREF3052_10490;product=Fe(2+)-trafficking protein;protein_id=OFO24550.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 19149 21833 . + . ID=gene-HMPREF3052_10495;Name=HMPREF3052_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10495 GCA_001815685.1|KV821668.1 Protein Homology CDS 19149 21833 . + 0 ID=cds-OFO24551.1;Parent=gene-HMPREF3052_10495;Dbxref=NCBI_GP:OFO24551.1;Name=OFO24551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174283.1;locus_tag=HMPREF3052_10495;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=OFO24551.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 21940 22101 . - . ID=gene-HMPREF3052_10500;Name=HMPREF3052_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10500 GCA_001815685.1|KV821668.1 Protein Homology CDS 21940 22101 . - 0 ID=cds-OFO24599.1;Parent=gene-HMPREF3052_10500;Dbxref=NCBI_GP:OFO24599.1;Name=OFO24599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311044.1;locus_tag=HMPREF3052_10500;product=cell division protein;protein_id=OFO24599.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 22269 23696 . - . ID=gene-HMPREF3052_10505;Name=HMPREF3052_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10505 GCA_001815685.1|KV821668.1 Protein Homology CDS 22269 23696 . - 0 ID=cds-OFO24552.1;Parent=gene-HMPREF3052_10505;Dbxref=NCBI_GP:OFO24552.1;Name=OFO24552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684631.1;locus_tag=HMPREF3052_10505;product=hypothetical protein;protein_id=OFO24552.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 24000 25094 . + . ID=gene-HMPREF3052_10510;Name=HMPREF3052_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10510 GCA_001815685.1|KV821668.1 Protein Homology CDS 24000 25094 . + 0 ID=cds-OFO24553.1;Parent=gene-HMPREF3052_10510;Dbxref=NCBI_GP:OFO24553.1;Name=OFO24553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518944.1;locus_tag=HMPREF3052_10510;product=cytochrome C biogenesis protein CcdA;protein_id=OFO24553.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 25256 27319 . + . ID=gene-HMPREF3052_10515;Name=HMPREF3052_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10515 GCA_001815685.1|KV821668.1 Protein Homology CDS 25256 27319 . + 0 ID=cds-OFO24554.1;Parent=gene-HMPREF3052_10515;Dbxref=NCBI_GP:OFO24554.1;Name=OFO24554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240026.1;locus_tag=HMPREF3052_10515;product=glycine--tRNA ligase subunit beta;protein_id=OFO24554.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 27482 28561 . + . ID=gene-HMPREF3052_10520;Name=HMPREF3052_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10520 GCA_001815685.1|KV821668.1 Protein Homology CDS 27482 28561 . + 0 ID=cds-OFO24555.1;Parent=gene-HMPREF3052_10520;Dbxref=NCBI_GP:OFO24555.1;Name=OFO24555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146699.1;locus_tag=HMPREF3052_10520;product=ATP-binding protein;protein_id=OFO24555.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 28620 28695 . + . ID=gene-HMPREF3052_10525;Name=HMPREF3052_10525;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_10525 GCA_001815685.1|KV821668.1 tRNAscan-SE tRNA 28620 28695 . + . ID=rna-HMPREF3052_10525;Parent=gene-HMPREF3052_10525;anticodon=(pos:28653..28655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10525;product=tRNA-Lys GCA_001815685.1|KV821668.1 tRNAscan-SE exon 28620 28695 . + . ID=exon-HMPREF3052_10525-1;Parent=rna-HMPREF3052_10525;anticodon=(pos:28653..28655);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10525;product=tRNA-Lys GCA_001815685.1|KV821668.1 Genbank gene 28887 30140 . - . ID=gene-HMPREF3052_10530;Name=HMPREF3052_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10530 GCA_001815685.1|KV821668.1 Protein Homology CDS 28887 30140 . - 0 ID=cds-OFO24556.1;Parent=gene-HMPREF3052_10530;Dbxref=NCBI_GP:OFO24556.1;Name=OFO24556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767193.1;locus_tag=HMPREF3052_10530;product=ABC transporter;protein_id=OFO24556.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 30137 31051 . - . ID=gene-HMPREF3052_10535;Name=HMPREF3052_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10535 GCA_001815685.1|KV821668.1 Protein Homology CDS 30137 31051 . - 0 ID=cds-OFO24557.1;Parent=gene-HMPREF3052_10535;Dbxref=NCBI_GP:OFO24557.1;Name=OFO24557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518940.1;locus_tag=HMPREF3052_10535;product=ABC transporter;protein_id=OFO24557.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 31080 31823 . - . ID=gene-HMPREF3052_10540;Name=HMPREF3052_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10540 GCA_001815685.1|KV821668.1 Protein Homology CDS 31080 31823 . - 0 ID=cds-OFO24558.1;Parent=gene-HMPREF3052_10540;Dbxref=NCBI_GP:OFO24558.1;Name=OFO24558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748199.1;locus_tag=HMPREF3052_10540;product=hypothetical protein;protein_id=OFO24558.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 31904 32902 . - . ID=gene-HMPREF3052_10545;Name=HMPREF3052_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10545 GCA_001815685.1|KV821668.1 Protein Homology CDS 31904 32902 . - 0 ID=cds-OFO24559.1;Parent=gene-HMPREF3052_10545;Dbxref=NCBI_GP:OFO24559.1;Name=OFO24559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684635.1;locus_tag=HMPREF3052_10545;product=peptidase;protein_id=OFO24559.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 32974 33822 . - . ID=gene-HMPREF3052_10550;Name=HMPREF3052_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10550 GCA_001815685.1|KV821668.1 Protein Homology CDS 32974 33822 . - 0 ID=cds-OFO24560.1;Parent=gene-HMPREF3052_10550;Dbxref=NCBI_GP:OFO24560.1;Name=OFO24560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742214.1;locus_tag=HMPREF3052_10550;product=ferredoxin;protein_id=OFO24560.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank pseudogene 33824 34026 . + . ID=gene-HMPREF3052_10555;Name=HMPREF3052_10555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10555;pseudo=true GCA_001815685.1|KV821668.1 Protein Homology CDS 33824 34026 . + 0 ID=cds-HMPREF3052_10555;Parent=gene-HMPREF3052_10555;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518937.1;locus_tag=HMPREF3052_10555;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 34033 34500 . + . ID=gene-HMPREF3052_10560;Name=HMPREF3052_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10560 GCA_001815685.1|KV821668.1 Protein Homology CDS 34033 34500 . + 0 ID=cds-OFO24561.1;Parent=gene-HMPREF3052_10560;Dbxref=NCBI_GP:OFO24561.1;Name=OFO24561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VL74.1;locus_tag=HMPREF3052_10560;product=preprotein translocase subunit SecA;protein_id=OFO24561.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 34767 35555 . - . ID=gene-HMPREF3052_10565;Name=HMPREF3052_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10565 GCA_001815685.1|KV821668.1 Protein Homology CDS 34767 35555 . - 0 ID=cds-OFO24562.1;Parent=gene-HMPREF3052_10565;Dbxref=NCBI_GP:OFO24562.1;Name=OFO24562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248144.1;locus_tag=HMPREF3052_10565;product=inositol monophosphatase;protein_id=OFO24562.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 35723 36448 . + . ID=gene-HMPREF3052_10570;Name=HMPREF3052_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10570 GCA_001815685.1|KV821668.1 Protein Homology CDS 35723 36448 . + 0 ID=cds-OFO24563.1;Parent=gene-HMPREF3052_10570;Dbxref=NCBI_GP:OFO24563.1;Name=OFO24563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684657.1;locus_tag=HMPREF3052_10570;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=OFO24563.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 36556 36846 . + . ID=gene-HMPREF3052_10575;Name=HMPREF3052_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10575 GCA_001815685.1|KV821668.1 Protein Homology CDS 36556 36846 . + 0 ID=cds-OFO24564.1;Parent=gene-HMPREF3052_10575;Dbxref=NCBI_GP:OFO24564.1;Name=OFO24564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759119.1;locus_tag=HMPREF3052_10575;product=acyl carrier protein;protein_id=OFO24564.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 36843 37901 . + . ID=gene-HMPREF3052_10580;Name=HMPREF3052_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10580 GCA_001815685.1|KV821668.1 Protein Homology CDS 36843 37901 . + 0 ID=cds-OFO24565.1;Parent=gene-HMPREF3052_10580;Dbxref=NCBI_GP:OFO24565.1;Name=OFO24565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681389.1;locus_tag=HMPREF3052_10580;product=beta-ketoacyl synthase;protein_id=OFO24565.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 37883 38572 . + . ID=gene-HMPREF3052_10585;Name=HMPREF3052_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10585 GCA_001815685.1|KV821668.1 Protein Homology CDS 37883 38572 . + 0 ID=cds-OFO24566.1;Parent=gene-HMPREF3052_10585;Dbxref=NCBI_GP:OFO24566.1;Name=OFO24566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684682.1;locus_tag=HMPREF3052_10585;product=hypothetical protein;protein_id=OFO24566.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 38683 40080 . - . ID=gene-HMPREF3052_10590;Name=HMPREF3052_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10590 GCA_001815685.1|KV821668.1 Protein Homology CDS 38683 40080 . - 0 ID=cds-OFO24567.1;Parent=gene-HMPREF3052_10590;Dbxref=NCBI_GP:OFO24567.1;Name=OFO24567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684632.1;locus_tag=HMPREF3052_10590;product=hypothetical protein;protein_id=OFO24567.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 40266 40772 . - . ID=gene-HMPREF3052_10595;Name=HMPREF3052_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10595 GCA_001815685.1|KV821668.1 Protein Homology CDS 40266 40772 . - 0 ID=cds-OFO24568.1;Parent=gene-HMPREF3052_10595;Dbxref=NCBI_GP:OFO24568.1;Name=OFO24568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXL8.1;locus_tag=HMPREF3052_10595;product=S-ribosylhomocysteinase;protein_id=OFO24568.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 40827 41150 . - . ID=gene-HMPREF3052_10600;Name=HMPREF3052_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10600 GCA_001815685.1|KV821668.1 Protein Homology CDS 40827 41150 . - 0 ID=cds-OFO24569.1;Parent=gene-HMPREF3052_10600;Dbxref=NCBI_GP:OFO24569.1;Name=OFO24569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686572.1;locus_tag=HMPREF3052_10600;product=iron donor protein CyaY;protein_id=OFO24569.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 41222 41392 . + . ID=gene-HMPREF3052_10605;Name=HMPREF3052_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10605 GCA_001815685.1|KV821668.1 Protein Homology CDS 41222 41392 . + 0 ID=cds-OFO24600.1;Parent=gene-HMPREF3052_10605;Dbxref=NCBI_GP:OFO24600.1;Name=OFO24600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745044.1;locus_tag=HMPREF3052_10605;product=prokaryotic lipo-attachment site family protein;protein_id=OFO24600.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 41410 42630 . + . ID=gene-HMPREF3052_10610;Name=HMPREF3052_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10610 GCA_001815685.1|KV821668.1 Protein Homology CDS 41410 42630 . + 0 ID=cds-OFO24570.1;Parent=gene-HMPREF3052_10610;Dbxref=NCBI_GP:OFO24570.1;Name=OFO24570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010356219.1;locus_tag=HMPREF3052_10610;product=diaminopimelate decarboxylase;protein_id=OFO24570.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 42733 42960 . - . ID=gene-HMPREF3052_10615;Name=HMPREF3052_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10615 GCA_001815685.1|KV821668.1 Protein Homology CDS 42733 42960 . - 0 ID=cds-OFO24571.1;Parent=gene-HMPREF3052_10615;Dbxref=NCBI_GP:OFO24571.1;Name=OFO24571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748234.1;locus_tag=HMPREF3052_10615;product=hypothetical protein;protein_id=OFO24571.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 42962 44335 . - . ID=gene-HMPREF3052_10620;Name=HMPREF3052_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10620 GCA_001815685.1|KV821668.1 Protein Homology CDS 42962 44335 . - 0 ID=cds-OFO24572.1;Parent=gene-HMPREF3052_10620;Dbxref=NCBI_GP:OFO24572.1;Name=OFO24572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273550.1;locus_tag=HMPREF3052_10620;product=sodium:proton antiporter;protein_id=OFO24572.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 44699 46018 . + . ID=gene-HMPREF3052_10625;Name=HMPREF3052_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10625 GCA_001815685.1|KV821668.1 Protein Homology CDS 44699 46018 . + 0 ID=cds-OFO24573.1;Parent=gene-HMPREF3052_10625;Dbxref=NCBI_GP:OFO24573.1;Name=OFO24573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684668.1;locus_tag=HMPREF3052_10625;product=MFS transporter;protein_id=OFO24573.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank pseudogene 46339 48954 . + . ID=gene-HMPREF3052_10630;Name=HMPREF3052_10630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10630;pseudo=true GCA_001815685.1|KV821668.1 Protein Homology CDS 46339 48954 . + 0 ID=cds-HMPREF3052_10630;Parent=gene-HMPREF3052_10630;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312619.1;locus_tag=HMPREF3052_10630;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 49217 51847 . - . ID=gene-HMPREF3052_10635;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF3052_10635 GCA_001815685.1|KV821668.1 Protein Homology CDS 49217 51847 . - 0 ID=cds-OFO24574.1;Parent=gene-HMPREF3052_10635;Dbxref=NCBI_GP:OFO24574.1;Name=OFO24574.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RNT1.1;locus_tag=HMPREF3052_10635;product=leucine--tRNA ligase;protein_id=OFO24574.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 52047 52382 . - . ID=gene-HMPREF3052_10640;Name=HMPREF3052_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10640 GCA_001815685.1|KV821668.1 Protein Homology CDS 52047 52382 . - 0 ID=cds-OFO24575.1;Parent=gene-HMPREF3052_10640;Dbxref=NCBI_GP:OFO24575.1;Name=OFO24575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685933.1;locus_tag=HMPREF3052_10640;product=hypothetical protein;protein_id=OFO24575.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 52583 53740 . + . ID=gene-HMPREF3052_10645;Name=HMPREF3052_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10645 GCA_001815685.1|KV821668.1 Protein Homology CDS 52583 53740 . + 0 ID=cds-OFO24576.1;Parent=gene-HMPREF3052_10645;Dbxref=NCBI_GP:OFO24576.1;Name=OFO24576.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685849.1;locus_tag=HMPREF3052_10645;product=molecular chaperone DnaJ;protein_id=OFO24576.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 54037 54615 . + . ID=gene-HMPREF3052_10650;Name=HMPREF3052_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10650 GCA_001815685.1|KV821668.1 Protein Homology CDS 54037 54615 . + 0 ID=cds-OFO24577.1;Parent=gene-HMPREF3052_10650;Dbxref=NCBI_GP:OFO24577.1;Name=OFO24577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685869.1;locus_tag=HMPREF3052_10650;product=hypothetical protein;protein_id=OFO24577.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 54617 55267 . + . ID=gene-HMPREF3052_10655;Name=HMPREF3052_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10655 GCA_001815685.1|KV821668.1 Protein Homology CDS 54617 55267 . + 0 ID=cds-OFO24578.1;Parent=gene-HMPREF3052_10655;Dbxref=NCBI_GP:OFO24578.1;Name=OFO24578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685915.1;locus_tag=HMPREF3052_10655;product=RNA pseudouridine synthase;protein_id=OFO24578.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 55343 56269 . - . ID=gene-HMPREF3052_10660;Name=HMPREF3052_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10660 GCA_001815685.1|KV821668.1 Protein Homology CDS 55343 56269 . - 0 ID=cds-OFO24579.1;Parent=gene-HMPREF3052_10660;Dbxref=NCBI_GP:OFO24579.1;Name=OFO24579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748251.1;locus_tag=HMPREF3052_10660;product=LysR family transcriptional regulator;protein_id=OFO24579.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 56445 57194 . + . ID=gene-HMPREF3052_10665;Name=HMPREF3052_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10665 GCA_001815685.1|KV821668.1 Protein Homology CDS 56445 57194 . + 0 ID=cds-OFO24580.1;Parent=gene-HMPREF3052_10665;Dbxref=NCBI_GP:OFO24580.1;Name=OFO24580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXG9.1;locus_tag=HMPREF3052_10665;product=Nif3-like dinuclear metal center hexameric protein;protein_id=OFO24580.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 57317 57898 . + . ID=gene-HMPREF3052_10670;Name=HMPREF3052_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10670 GCA_001815685.1|KV821668.1 Protein Homology CDS 57317 57898 . + 0 ID=cds-OFO24581.1;Parent=gene-HMPREF3052_10670;Dbxref=NCBI_GP:OFO24581.1;Name=OFO24581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273542.1;locus_tag=HMPREF3052_10670;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=OFO24581.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 57917 59266 . + . ID=gene-HMPREF3052_10675;Name=HMPREF3052_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10675 GCA_001815685.1|KV821668.1 Protein Homology CDS 57917 59266 . + 0 ID=cds-OFO24582.1;Parent=gene-HMPREF3052_10675;Dbxref=NCBI_GP:OFO24582.1;Name=OFO24582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218185.1;locus_tag=HMPREF3052_10675;product=cytochrome B;protein_id=OFO24582.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 59266 60066 . + . ID=gene-HMPREF3052_10680;Name=HMPREF3052_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10680 GCA_001815685.1|KV821668.1 Protein Homology CDS 59266 60066 . + 0 ID=cds-OFO24583.1;Parent=gene-HMPREF3052_10680;Dbxref=NCBI_GP:OFO24583.1;Name=OFO24583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743826.1;locus_tag=HMPREF3052_10680;product=cytochrome C;protein_id=OFO24583.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 60281 60886 . + . ID=gene-HMPREF3052_10685;Name=HMPREF3052_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10685 GCA_001815685.1|KV821668.1 Protein Homology CDS 60281 60886 . + 0 ID=cds-OFO24584.1;Parent=gene-HMPREF3052_10685;Dbxref=NCBI_GP:OFO24584.1;Name=OFO24584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772410.1;locus_tag=HMPREF3052_10685;product=stringent starvation protein A;protein_id=OFO24584.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 60898 61302 . + . ID=gene-HMPREF3052_10690;Name=HMPREF3052_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10690 GCA_001815685.1|KV821668.1 Protein Homology CDS 60898 61302 . + 0 ID=cds-OFO24585.1;Parent=gene-HMPREF3052_10690;Dbxref=NCBI_GP:OFO24585.1;Name=OFO24585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681871.1;locus_tag=HMPREF3052_10690;product=stringent starvation protein B;protein_id=OFO24585.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 61442 61517 . - . ID=gene-HMPREF3052_10695;Name=HMPREF3052_10695;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_10695 GCA_001815685.1|KV821668.1 tRNAscan-SE tRNA 61442 61517 . - . ID=rna-HMPREF3052_10695;Parent=gene-HMPREF3052_10695;anticodon=(pos:complement(61482..61484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10695;product=tRNA-Ala GCA_001815685.1|KV821668.1 tRNAscan-SE exon 61442 61517 . - . ID=exon-HMPREF3052_10695-1;Parent=rna-HMPREF3052_10695;anticodon=(pos:complement(61482..61484));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10695;product=tRNA-Ala GCA_001815685.1|KV821668.1 Genbank gene 61524 61600 . - . ID=gene-HMPREF3052_10700;Name=HMPREF3052_10700;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_10700 GCA_001815685.1|KV821668.1 tRNAscan-SE tRNA 61524 61600 . - . ID=rna-HMPREF3052_10700;Parent=gene-HMPREF3052_10700;anticodon=(pos:complement(61564..61566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10700;product=tRNA-Met GCA_001815685.1|KV821668.1 tRNAscan-SE exon 61524 61600 . - . ID=exon-HMPREF3052_10700-1;Parent=rna-HMPREF3052_10700;anticodon=(pos:complement(61564..61566));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_10700;product=tRNA-Met GCA_001815685.1|KV821668.1 Genbank gene 61707 62858 . - . ID=gene-HMPREF3052_10705;Name=HMPREF3052_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10705 GCA_001815685.1|KV821668.1 Protein Homology CDS 61707 62858 . - 0 ID=cds-OFO24586.1;Parent=gene-HMPREF3052_10705;Dbxref=NCBI_GP:OFO24586.1;Name=OFO24586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681873.1;locus_tag=HMPREF3052_10705;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=OFO24586.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 63261 63716 . + . ID=gene-HMPREF3052_10710;Name=HMPREF3052_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10710 GCA_001815685.1|KV821668.1 Protein Homology CDS 63261 63716 . + 0 ID=cds-OFO24587.1;Parent=gene-HMPREF3052_10710;Dbxref=NCBI_GP:OFO24587.1;Name=OFO24587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676745.1;locus_tag=HMPREF3052_10710;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=OFO24587.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 63713 64675 . + . ID=gene-HMPREF3052_10715;Name=HMPREF3052_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10715 GCA_001815685.1|KV821668.1 Protein Homology CDS 63713 64675 . + 0 ID=cds-OFO24588.1;Parent=gene-HMPREF3052_10715;Dbxref=NCBI_GP:OFO24588.1;Name=OFO24588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748267.1;locus_tag=HMPREF3052_10715;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=OFO24588.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 64738 65001 . + . ID=gene-HMPREF3052_10720;Name=HMPREF3052_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10720 GCA_001815685.1|KV821668.1 Protein Homology CDS 64738 65001 . + 0 ID=cds-OFO24589.1;Parent=gene-HMPREF3052_10720;Dbxref=NCBI_GP:OFO24589.1;Name=OFO24589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681879.1;locus_tag=HMPREF3052_10720;product=cell division protein FtsL;protein_id=OFO24589.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 65080 66828 . + . ID=gene-HMPREF3052_10725;Name=HMPREF3052_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10725 GCA_001815685.1|KV821668.1 Protein Homology CDS 65080 66828 . + 0 ID=cds-OFO24590.1;Parent=gene-HMPREF3052_10725;Dbxref=NCBI_GP:OFO24590.1;Name=OFO24590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247964.1;locus_tag=HMPREF3052_10725;product=penicillin-binding protein;protein_id=OFO24590.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 66855 68333 . + . ID=gene-HMPREF3052_10730;Name=HMPREF3052_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10730 GCA_001815685.1|KV821668.1 Protein Homology CDS 66855 68333 . + 0 ID=cds-OFO24591.1;Parent=gene-HMPREF3052_10730;Dbxref=NCBI_GP:OFO24591.1;Name=OFO24591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748271.1;locus_tag=HMPREF3052_10730;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=OFO24591.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 68514 69035 . + . ID=gene-HMPREF3052_10735;Name=HMPREF3052_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10735 GCA_001815685.1|KV821668.1 Protein Homology CDS 68514 69035 . + 0 ID=cds-OFO24592.1;Parent=gene-HMPREF3052_10735;Dbxref=NCBI_GP:OFO24592.1;Name=OFO24592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271183.1;locus_tag=HMPREF3052_10735;product=peptidase M23;protein_id=OFO24592.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 69147 69710 . + . ID=gene-HMPREF3052_10740;Name=HMPREF3052_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10740 GCA_001815685.1|KV821668.1 GeneMarkS+ CDS 69147 69710 . + 0 ID=cds-OFO24593.1;Parent=gene-HMPREF3052_10740;Dbxref=NCBI_GP:OFO24593.1;Name=OFO24593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_10740;product=hypothetical protein;protein_id=OFO24593.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 69763 70707 . + . ID=gene-HMPREF3052_10745;Name=HMPREF3052_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10745 GCA_001815685.1|KV821668.1 GeneMarkS+ CDS 69763 70707 . + 0 ID=cds-OFO24594.1;Parent=gene-HMPREF3052_10745;Dbxref=NCBI_GP:OFO24594.1;Name=OFO24594.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_10745;product=hypothetical protein;protein_id=OFO24594.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 70788 71327 . + . ID=gene-HMPREF3052_10750;Name=HMPREF3052_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10750 GCA_001815685.1|KV821668.1 Protein Homology CDS 70788 71327 . + 0 ID=cds-OFO24595.1;Parent=gene-HMPREF3052_10750;Dbxref=NCBI_GP:OFO24595.1;Name=OFO24595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684204.1;locus_tag=HMPREF3052_10750;product=lytic enzyme;protein_id=OFO24595.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 71358 72722 . + . ID=gene-HMPREF3052_10755;Name=HMPREF3052_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10755 GCA_001815685.1|KV821668.1 Protein Homology CDS 71358 72722 . + 0 ID=cds-OFO24596.1;Parent=gene-HMPREF3052_10755;Dbxref=NCBI_GP:OFO24596.1;Name=OFO24596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748281.1;locus_tag=HMPREF3052_10755;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=OFO24596.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 72989 74071 . + . ID=gene-HMPREF3052_10760;Name=HMPREF3052_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10760 GCA_001815685.1|KV821668.1 Protein Homology CDS 72989 74071 . + 0 ID=cds-OFO24597.1;Parent=gene-HMPREF3052_10760;Dbxref=NCBI_GP:OFO24597.1;Name=OFO24597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310927.1;locus_tag=HMPREF3052_10760;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=OFO24597.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank gene 74187 74675 . + . ID=gene-HMPREF3052_10765;Name=HMPREF3052_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10765 GCA_001815685.1|KV821668.1 Protein Homology CDS 74187 74675 . + 0 ID=cds-OFO24598.1;Parent=gene-HMPREF3052_10765;Dbxref=NCBI_GP:OFO24598.1;Name=OFO24598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312749.1;locus_tag=HMPREF3052_10765;product=globin;protein_id=OFO24598.1;transl_table=11 GCA_001815685.1|KV821668.1 Genbank pseudogene 74866 75122 . + . ID=gene-HMPREF3052_10770;Name=HMPREF3052_10770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10770;pseudo=true GCA_001815685.1|KV821668.1 Protein Homology CDS 74866 75122 . + 0 ID=cds-HMPREF3052_10770;Parent=gene-HMPREF3052_10770;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767349.1;locus_tag=HMPREF3052_10770;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV821669.1 1 667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821669.1 Genbank region 1 667 . + . ID=KV821669.1:1..667;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 ##sequence-region KV821670.1 1 71578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821670.1 Genbank region 1 71578 . + . ID=KV821670.1:1..71578;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821670.1 Genbank gene 1 1675 . + . ID=gene-HMPREF3052_10775;Name=HMPREF3052_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10775;partial=true;start_range=.,1 GCA_001815685.1|KV821670.1 Protein Homology CDS 1 1675 . + 1 ID=cds-OFO24361.1;Parent=gene-HMPREF3052_10775;Dbxref=NCBI_GP:OFO24361.1;Name=OFO24361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685427.1;locus_tag=HMPREF3052_10775;partial=true;product=transferrin-binding protein;protein_id=OFO24361.1;start_range=.,1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank pseudogene 1904 2520 . + . ID=gene-HMPREF3052_10780;Name=HMPREF3052_10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10780;pseudo=true GCA_001815685.1|KV821670.1 Protein Homology CDS 1904 2520 . + 0 ID=cds-HMPREF3052_10780;Parent=gene-HMPREF3052_10780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269932.1;locus_tag=HMPREF3052_10780;product=transposase;pseudo=true;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 2736 4076 . - . ID=gene-HMPREF3052_10785;Name=HMPREF3052_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10785 GCA_001815685.1|KV821670.1 Protein Homology CDS 2736 4076 . - 0 ID=cds-OFO24362.1;Parent=gene-HMPREF3052_10785;Dbxref=NCBI_GP:OFO24362.1;Name=OFO24362.1;Note=bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein%3B functions in riboflavin synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519504.1;locus_tag=HMPREF3052_10785;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=OFO24362.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 4275 4877 . + . ID=gene-HMPREF3052_10790;Name=HMPREF3052_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10790 GCA_001815685.1|KV821670.1 Protein Homology CDS 4275 4877 . + 0 ID=cds-OFO24408.1;Parent=gene-HMPREF3052_10790;Dbxref=NCBI_GP:OFO24408.1;Name=OFO24408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284648.1;locus_tag=HMPREF3052_10790;product=hypothetical protein;protein_id=OFO24408.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 4943 6190 . - . ID=gene-HMPREF3052_10795;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=HMPREF3052_10795 GCA_001815685.1|KV821670.1 Protein Homology CDS 4943 6190 . - 0 ID=cds-OFO24363.1;Parent=gene-HMPREF3052_10795;Dbxref=NCBI_GP:OFO24363.1;Name=OFO24363.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581805.1;locus_tag=HMPREF3052_10795;product=N-acetylmuramoyl-L-alanine amidase;protein_id=OFO24363.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 6178 6648 . - . ID=gene-HMPREF3052_10800;Name=HMPREF3052_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10800 GCA_001815685.1|KV821670.1 Protein Homology CDS 6178 6648 . - 0 ID=cds-OFO24364.1;Parent=gene-HMPREF3052_10800;Dbxref=NCBI_GP:OFO24364.1;Name=OFO24364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746020.1;locus_tag=HMPREF3052_10800;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=OFO24364.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 6820 7908 . + . ID=gene-HMPREF3052_10805;Name=HMPREF3052_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10805 GCA_001815685.1|KV821670.1 Protein Homology CDS 6820 7908 . + 0 ID=cds-OFO24365.1;Parent=gene-HMPREF3052_10805;Dbxref=NCBI_GP:OFO24365.1;Name=OFO24365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519511.1;locus_tag=HMPREF3052_10805;product=prephenate dehydratase;protein_id=OFO24365.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 7970 9199 . - . ID=gene-HMPREF3052_10810;Name=HMPREF3052_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10810 GCA_001815685.1|KV821670.1 Protein Homology CDS 7970 9199 . - 0 ID=cds-OFO24366.1;Parent=gene-HMPREF3052_10810;Dbxref=NCBI_GP:OFO24366.1;Name=OFO24366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283702.1;locus_tag=HMPREF3052_10810;product=hemolysin secretion protein D;protein_id=OFO24366.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 9288 11501 . - . ID=gene-HMPREF3052_10815;Name=HMPREF3052_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10815 GCA_001815685.1|KV821670.1 Protein Homology CDS 9288 11501 . - 0 ID=cds-OFO24367.1;Parent=gene-HMPREF3052_10815;Dbxref=NCBI_GP:OFO24367.1;Name=OFO24367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651178.1;locus_tag=HMPREF3052_10815;product=hypothetical protein;protein_id=OFO24367.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 11545 12774 . - . ID=gene-HMPREF3052_10820;Name=HMPREF3052_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10820 GCA_001815685.1|KV821670.1 Protein Homology CDS 11545 12774 . - 0 ID=cds-OFO24368.1;Parent=gene-HMPREF3052_10820;Dbxref=NCBI_GP:OFO24368.1;Name=OFO24368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683250.1;locus_tag=HMPREF3052_10820;product=transporter;protein_id=OFO24368.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 13078 14337 . - . ID=gene-HMPREF3052_10825;Name=HMPREF3052_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10825 GCA_001815685.1|KV821670.1 Protein Homology CDS 13078 14337 . - 0 ID=cds-OFO24369.1;Parent=gene-HMPREF3052_10825;Dbxref=NCBI_GP:OFO24369.1;Name=OFO24369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681052.1;locus_tag=HMPREF3052_10825;product=SAM-dependent methyltransferase;protein_id=OFO24369.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 14373 15242 . - . ID=gene-HMPREF3052_10830;Name=HMPREF3052_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10830 GCA_001815685.1|KV821670.1 Protein Homology CDS 14373 15242 . - 0 ID=cds-OFO24370.1;Parent=gene-HMPREF3052_10830;Dbxref=NCBI_GP:OFO24370.1;Name=OFO24370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003702776.1;locus_tag=HMPREF3052_10830;product=hypothetical protein;protein_id=OFO24370.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 15283 16098 . - . ID=gene-HMPREF3052_10835;Name=HMPREF3052_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10835 GCA_001815685.1|KV821670.1 Protein Homology CDS 15283 16098 . - 0 ID=cds-OFO24409.1;Parent=gene-HMPREF3052_10835;Dbxref=NCBI_GP:OFO24409.1;Name=OFO24409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746040.1;locus_tag=HMPREF3052_10835;product=RNA methyltransferase;protein_id=OFO24409.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 16274 17059 . + . ID=gene-HMPREF3052_10840;Name=HMPREF3052_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10840 GCA_001815685.1|KV821670.1 Protein Homology CDS 16274 17059 . + 0 ID=cds-OFO24371.1;Parent=gene-HMPREF3052_10840;Dbxref=NCBI_GP:OFO24371.1;Name=OFO24371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681056.1;locus_tag=HMPREF3052_10840;product=inositol monophosphatase;protein_id=OFO24371.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 17324 18127 . + . ID=gene-HMPREF3052_10845;Name=HMPREF3052_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10845 GCA_001815685.1|KV821670.1 Protein Homology CDS 17324 18127 . + 0 ID=cds-OFO24372.1;Parent=gene-HMPREF3052_10845;Dbxref=NCBI_GP:OFO24372.1;Name=OFO24372.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683195.1;locus_tag=HMPREF3052_10845;product=gamma-glutamyl kinase;protein_id=OFO24372.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 18137 19387 . + . ID=gene-HMPREF3052_10850;Name=HMPREF3052_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10850 GCA_001815685.1|KV821670.1 Protein Homology CDS 18137 19387 . + 0 ID=cds-OFO24373.1;Parent=gene-HMPREF3052_10850;Dbxref=NCBI_GP:OFO24373.1;Name=OFO24373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683179.1;locus_tag=HMPREF3052_10850;product=gamma-glutamyl-phosphate reductase;protein_id=OFO24373.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 19475 19786 . + . ID=gene-HMPREF3052_10855;Name=HMPREF3052_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10855 GCA_001815685.1|KV821670.1 Protein Homology CDS 19475 19786 . + 0 ID=cds-OFO24374.1;Parent=gene-HMPREF3052_10855;Dbxref=NCBI_GP:OFO24374.1;Name=OFO24374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214004.1;locus_tag=HMPREF3052_10855;product=monothiol glutaredoxin%2C Grx4 family;protein_id=OFO24374.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 19935 20561 . + . ID=gene-HMPREF3052_10860;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF3052_10860 GCA_001815685.1|KV821670.1 Protein Homology CDS 19935 20561 . + 0 ID=cds-OFO24375.1;Parent=gene-HMPREF3052_10860;Dbxref=NCBI_GP:OFO24375.1;Name=OFO24375.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K048.1;locus_tag=HMPREF3052_10860;product=uracil phosphoribosyltransferase;protein_id=OFO24375.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 20659 20976 . + . ID=gene-HMPREF3052_10865;Name=HMPREF3052_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10865 GCA_001815685.1|KV821670.1 Protein Homology CDS 20659 20976 . + 0 ID=cds-OFO24376.1;Parent=gene-HMPREF3052_10865;Dbxref=NCBI_GP:OFO24376.1;Name=OFO24376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449238.1;locus_tag=HMPREF3052_10865;product=hypothetical protein;protein_id=OFO24376.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 21039 21371 . - . ID=gene-HMPREF3052_10870;Name=HMPREF3052_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10870 GCA_001815685.1|KV821670.1 Protein Homology CDS 21039 21371 . - 0 ID=cds-OFO24377.1;Parent=gene-HMPREF3052_10870;Dbxref=NCBI_GP:OFO24377.1;Name=OFO24377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013106122.1;locus_tag=HMPREF3052_10870;product=thiol reductase thioredoxin;protein_id=OFO24377.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 21497 23062 . - . ID=gene-HMPREF3052_10875;Name=HMPREF3052_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10875 GCA_001815685.1|KV821670.1 Protein Homology CDS 21497 23062 . - 0 ID=cds-OFO24378.1;Parent=gene-HMPREF3052_10875;Dbxref=NCBI_GP:OFO24378.1;Name=OFO24378.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746052.1;locus_tag=HMPREF3052_10875;product=microcin ABC transporter ATP-binding protein;protein_id=OFO24378.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 23144 24697 . - . ID=gene-HMPREF3052_10880;Name=HMPREF3052_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10880 GCA_001815685.1|KV821670.1 Protein Homology CDS 23144 24697 . - 0 ID=cds-OFO24379.1;Parent=gene-HMPREF3052_10880;Dbxref=NCBI_GP:OFO24379.1;Name=OFO24379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520844.1;locus_tag=HMPREF3052_10880;product=long-chain fatty acid--CoA ligase;protein_id=OFO24379.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 25024 25809 . - . ID=gene-HMPREF3052_10885;Name=HMPREF3052_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10885 GCA_001815685.1|KV821670.1 Protein Homology CDS 25024 25809 . - 0 ID=cds-OFO24380.1;Parent=gene-HMPREF3052_10885;Dbxref=NCBI_GP:OFO24380.1;Name=OFO24380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681471.1;locus_tag=HMPREF3052_10885;product=DNAase;protein_id=OFO24380.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 25814 26167 . - . ID=gene-HMPREF3052_10890;Name=HMPREF3052_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10890 GCA_001815685.1|KV821670.1 Protein Homology CDS 25814 26167 . - 0 ID=cds-OFO24381.1;Parent=gene-HMPREF3052_10890;Dbxref=NCBI_GP:OFO24381.1;Name=OFO24381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746058.1;locus_tag=HMPREF3052_10890;product=pilus assembly protein;protein_id=OFO24381.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 26178 27158 . - . ID=gene-HMPREF3052_10895;Name=HMPREF3052_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10895 GCA_001815685.1|KV821670.1 Protein Homology CDS 26178 27158 . - 0 ID=cds-OFO24382.1;Parent=gene-HMPREF3052_10895;Dbxref=NCBI_GP:OFO24382.1;Name=OFO24382.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746059.1;locus_tag=HMPREF3052_10895;product=DNA polymerase III subunit delta';protein_id=OFO24382.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 27481 28797 . - . ID=gene-HMPREF3052_10900;Name=HMPREF3052_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10900 GCA_001815685.1|KV821670.1 Protein Homology CDS 27481 28797 . - 0 ID=cds-OFO24383.1;Parent=gene-HMPREF3052_10900;Dbxref=NCBI_GP:OFO24383.1;Name=OFO24383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520839.1;locus_tag=HMPREF3052_10900;product=hypothetical protein;protein_id=OFO24383.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 28794 28982 . - . ID=gene-HMPREF3052_10905;Name=HMPREF3052_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10905 GCA_001815685.1|KV821670.1 Protein Homology CDS 28794 28982 . - 0 ID=cds-OFO24384.1;Parent=gene-HMPREF3052_10905;Dbxref=NCBI_GP:OFO24384.1;Name=OFO24384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681462.1;locus_tag=HMPREF3052_10905;product=cytochrome C oxidase Cbb3;protein_id=OFO24384.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 28982 29287 . - . ID=gene-HMPREF3052_10910;Name=HMPREF3052_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10910 GCA_001815685.1|KV821670.1 Protein Homology CDS 28982 29287 . - 0 ID=cds-OFO24385.1;Parent=gene-HMPREF3052_10910;Dbxref=NCBI_GP:OFO24385.1;Name=OFO24385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520837.1;locus_tag=HMPREF3052_10910;product=hypothetical protein;protein_id=OFO24385.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 29523 30719 . + . ID=gene-HMPREF3052_10915;Name=HMPREF3052_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10915 GCA_001815685.1|KV821670.1 Protein Homology CDS 29523 30719 . + 0 ID=cds-OFO24386.1;Parent=gene-HMPREF3052_10915;Dbxref=NCBI_GP:OFO24386.1;Name=OFO24386.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776902.1;locus_tag=HMPREF3052_10915;product=acetate kinase;protein_id=OFO24386.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 30870 33632 . - . ID=gene-HMPREF3052_10920;Name=HMPREF3052_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10920 GCA_001815685.1|KV821670.1 Protein Homology CDS 30870 33632 . - 0 ID=cds-OFO24387.1;Parent=gene-HMPREF3052_10920;Dbxref=NCBI_GP:OFO24387.1;Name=OFO24387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269796.1;locus_tag=HMPREF3052_10920;product=TonB-dependent receptor;protein_id=OFO24387.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 34019 34480 . - . ID=gene-HMPREF3052_10925;Name=HMPREF3052_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10925 GCA_001815685.1|KV821670.1 Protein Homology CDS 34019 34480 . - 0 ID=cds-OFO24388.1;Parent=gene-HMPREF3052_10925;Dbxref=NCBI_GP:OFO24388.1;Name=OFO24388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240458.1;locus_tag=HMPREF3052_10925;product=cytochrome C;protein_id=OFO24388.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 34613 35437 . + . ID=gene-HMPREF3052_10930;Name=HMPREF3052_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10930 GCA_001815685.1|KV821670.1 Protein Homology CDS 34613 35437 . + 0 ID=cds-OFO24389.1;Parent=gene-HMPREF3052_10930;Dbxref=NCBI_GP:OFO24389.1;Name=OFO24389.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272570.1;locus_tag=HMPREF3052_10930;product=NAD(P)-dependent oxidoreductase;protein_id=OFO24389.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 35551 36024 . + . ID=gene-HMPREF3052_10935;Name=HMPREF3052_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10935 GCA_001815685.1|KV821670.1 Protein Homology CDS 35551 36024 . + 0 ID=cds-OFO24390.1;Parent=gene-HMPREF3052_10935;Dbxref=NCBI_GP:OFO24390.1;Name=OFO24390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681449.1;locus_tag=HMPREF3052_10935;product=cation uptake regulator;protein_id=OFO24390.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 36012 36941 . + . ID=gene-HMPREF3052_10940;Name=HMPREF3052_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10940 GCA_001815685.1|KV821670.1 Protein Homology CDS 36012 36941 . + 0 ID=cds-OFO24391.1;Parent=gene-HMPREF3052_10940;Dbxref=NCBI_GP:OFO24391.1;Name=OFO24391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744588.1;locus_tag=HMPREF3052_10940;product=cobalamin biosynthesis protein CobW;protein_id=OFO24391.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 37041 38096 . + . ID=gene-HMPREF3052_10945;Name=HMPREF3052_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10945 GCA_001815685.1|KV821670.1 Protein Homology CDS 37041 38096 . + 0 ID=cds-OFO24392.1;Parent=gene-HMPREF3052_10945;Dbxref=NCBI_GP:OFO24392.1;Name=OFO24392.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284657.1;locus_tag=HMPREF3052_10945;product=microcin ABC transporter permease;protein_id=OFO24392.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 38133 39173 . + . ID=gene-HMPREF3052_10950;Name=HMPREF3052_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10950 GCA_001815685.1|KV821670.1 Protein Homology CDS 38133 39173 . + 0 ID=cds-OFO24393.1;Parent=gene-HMPREF3052_10950;Dbxref=NCBI_GP:OFO24393.1;Name=OFO24393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680950.1;locus_tag=HMPREF3052_10950;product=peptide ABC transporter permease;protein_id=OFO24393.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 39284 39964 . + . ID=gene-HMPREF3052_10955;Name=HMPREF3052_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10955 GCA_001815685.1|KV821670.1 Protein Homology CDS 39284 39964 . + 0 ID=cds-OFO24394.1;Parent=gene-HMPREF3052_10955;Dbxref=NCBI_GP:OFO24394.1;Name=OFO24394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680951.1;locus_tag=HMPREF3052_10955;product=hypothetical protein;protein_id=OFO24394.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 40050 40859 . - . ID=gene-HMPREF3052_10960;Name=HMPREF3052_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10960 GCA_001815685.1|KV821670.1 Protein Homology CDS 40050 40859 . - 0 ID=cds-OFO24395.1;Parent=gene-HMPREF3052_10960;Dbxref=NCBI_GP:OFO24395.1;Name=OFO24395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682965.1;locus_tag=HMPREF3052_10960;product=hypothetical protein;protein_id=OFO24395.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 40861 41640 . - . ID=gene-HMPREF3052_10965;Name=HMPREF3052_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10965 GCA_001815685.1|KV821670.1 Protein Homology CDS 40861 41640 . - 0 ID=cds-OFO24396.1;Parent=gene-HMPREF3052_10965;Dbxref=NCBI_GP:OFO24396.1;Name=OFO24396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682918.1;locus_tag=HMPREF3052_10965;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=OFO24396.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 41764 43113 . - . ID=gene-HMPREF3052_10970;Name=HMPREF3052_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10970 GCA_001815685.1|KV821670.1 Protein Homology CDS 41764 43113 . - 0 ID=cds-OFO24397.1;Parent=gene-HMPREF3052_10970;Dbxref=NCBI_GP:OFO24397.1;Name=OFO24397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116364.1;locus_tag=HMPREF3052_10970;product=exodeoxyribonuclease VII large subunit;protein_id=OFO24397.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 43295 44305 . + . ID=gene-HMPREF3052_10975;Name=HMPREF3052_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10975 GCA_001815685.1|KV821670.1 Protein Homology CDS 43295 44305 . + 0 ID=cds-OFO24398.1;Parent=gene-HMPREF3052_10975;Dbxref=NCBI_GP:OFO24398.1;Name=OFO24398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680957.1;locus_tag=HMPREF3052_10975;product=tetraacyldisaccharide 4'-kinase;protein_id=OFO24398.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank pseudogene 44370 45034 . + . ID=gene-HMPREF3052_10980;Name=HMPREF3052_10980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10980;pseudo=true GCA_001815685.1|KV821670.1 Protein Homology CDS 44370 45034 . + 0 ID=cds-HMPREF3052_10980;Parent=gene-HMPREF3052_10980;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746094.1;locus_tag=HMPREF3052_10980;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821670.1 Genbank pseudogene 45083 45667 . + . ID=gene-HMPREF3052_10985;Name=HMPREF3052_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_10985;pseudo=true GCA_001815685.1|KV821670.1 Protein Homology CDS 45083 45667 . + 0 ID=cds-HMPREF3052_10985;Parent=gene-HMPREF3052_10985;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270541.1;locus_tag=HMPREF3052_10985;product=hypothetical protein;pseudo=true;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 45763 45945 . + . ID=gene-HMPREF3052_10990;Name=HMPREF3052_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10990 GCA_001815685.1|KV821670.1 Protein Homology CDS 45763 45945 . + 0 ID=cds-OFO24399.1;Parent=gene-HMPREF3052_10990;Dbxref=NCBI_GP:OFO24399.1;Name=OFO24399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679524.1;locus_tag=HMPREF3052_10990;product=hypothetical protein;protein_id=OFO24399.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 45942 46700 . + . ID=gene-HMPREF3052_10995;Name=HMPREF3052_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_10995 GCA_001815685.1|KV821670.1 Protein Homology CDS 45942 46700 . + 0 ID=cds-OFO24400.1;Parent=gene-HMPREF3052_10995;Dbxref=NCBI_GP:OFO24400.1;Name=OFO24400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776843.1;locus_tag=HMPREF3052_10995;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=OFO24400.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 46722 47240 . + . ID=gene-HMPREF3052_11000;Name=HMPREF3052_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11000 GCA_001815685.1|KV821670.1 Protein Homology CDS 46722 47240 . + 0 ID=cds-OFO24401.1;Parent=gene-HMPREF3052_11000;Dbxref=NCBI_GP:OFO24401.1;Name=OFO24401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520816.1;locus_tag=HMPREF3052_11000;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=OFO24401.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 47312 47959 . + . ID=gene-HMPREF3052_11005;Name=HMPREF3052_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11005 GCA_001815685.1|KV821670.1 Protein Homology CDS 47312 47959 . + 0 ID=cds-OFO24402.1;Parent=gene-HMPREF3052_11005;Dbxref=NCBI_GP:OFO24402.1;Name=OFO24402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232195.1;locus_tag=HMPREF3052_11005;product=adenylate kinase;protein_id=OFO24402.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 48070 48801 . + . ID=gene-HMPREF3052_11010;Name=HMPREF3052_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11010 GCA_001815685.1|KV821670.1 Protein Homology CDS 48070 48801 . + 0 ID=cds-OFO24403.1;Parent=gene-HMPREF3052_11010;Dbxref=NCBI_GP:OFO24403.1;Name=OFO24403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272634.1;locus_tag=HMPREF3052_11010;product=orotidine 5'-phosphate decarboxylase;protein_id=OFO24403.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 48815 49486 . + . ID=gene-HMPREF3052_11015;Name=HMPREF3052_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11015 GCA_001815685.1|KV821670.1 Protein Homology CDS 48815 49486 . + 0 ID=cds-OFO24404.1;Parent=gene-HMPREF3052_11015;Dbxref=NCBI_GP:OFO24404.1;Name=OFO24404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768970.1;locus_tag=HMPREF3052_11015;product=epimerase;protein_id=OFO24404.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 49528 50490 . + . ID=gene-HMPREF3052_11020;Name=HMPREF3052_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11020 GCA_001815685.1|KV821670.1 GeneMarkS+ CDS 49528 50490 . + 0 ID=cds-OFO24405.1;Parent=gene-HMPREF3052_11020;Dbxref=NCBI_GP:OFO24405.1;Name=OFO24405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_11020;product=hypothetical protein;protein_id=OFO24405.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 50631 51635 . + . ID=gene-HMPREF3052_11025;Name=HMPREF3052_11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11025 GCA_001815685.1|KV821670.1 Protein Homology CDS 50631 51635 . + 0 ID=cds-OFO24406.1;Parent=gene-HMPREF3052_11025;Dbxref=NCBI_GP:OFO24406.1;Name=OFO24406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682942.1;locus_tag=HMPREF3052_11025;product=ADP-L-glycero-D-mannoheptose-6-epimerase;protein_id=OFO24406.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 51735 53744 . - . ID=gene-HMPREF3052_11030;Name=HMPREF3052_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11030 GCA_001815685.1|KV821670.1 Protein Homology CDS 51735 53744 . - 0 ID=cds-OFO24407.1;Parent=gene-HMPREF3052_11030;Dbxref=NCBI_GP:OFO24407.1;Name=OFO24407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173594.1;locus_tag=HMPREF3052_11030;product=phosphoglycerol transferase;protein_id=OFO24407.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 53999 54088 . - . ID=gene-HMPREF3052_11035;Name=HMPREF3052_11035;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_11035 GCA_001815685.1|KV821670.1 tRNAscan-SE tRNA 53999 54088 . - . ID=rna-HMPREF3052_11035;Parent=gene-HMPREF3052_11035;anticodon=(pos:complement(54052..54054));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_11035;product=tRNA-Leu GCA_001815685.1|KV821670.1 tRNAscan-SE exon 53999 54088 . - . ID=exon-HMPREF3052_11035-1;Parent=rna-HMPREF3052_11035;anticodon=(pos:complement(54052..54054));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_11035;product=tRNA-Leu GCA_001815685.1|KV821670.1 Genbank gene 54198 54271 . - . ID=gene-HMPREF3052_11040;Name=HMPREF3052_11040;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_11040 GCA_001815685.1|KV821670.1 tRNAscan-SE tRNA 54198 54271 . - . ID=rna-HMPREF3052_11040;Parent=gene-HMPREF3052_11040;anticodon=(pos:complement(54237..54239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_11040;product=tRNA-Cys GCA_001815685.1|KV821670.1 tRNAscan-SE exon 54198 54271 . - . ID=exon-HMPREF3052_11040-1;Parent=rna-HMPREF3052_11040;anticodon=(pos:complement(54237..54239));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_11040;product=tRNA-Cys GCA_001815685.1|KV821670.1 Genbank gene 54308 54383 . - . ID=gene-HMPREF3052_11045;Name=HMPREF3052_11045;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3052_11045 GCA_001815685.1|KV821670.1 tRNAscan-SE tRNA 54308 54383 . - . ID=rna-HMPREF3052_11045;Parent=gene-HMPREF3052_11045;anticodon=(pos:complement(54348..54350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_11045;product=tRNA-Gly GCA_001815685.1|KV821670.1 tRNAscan-SE exon 54308 54383 . - . ID=exon-HMPREF3052_11045-1;Parent=rna-HMPREF3052_11045;anticodon=(pos:complement(54348..54350));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3052_11045;product=tRNA-Gly GCA_001815685.1|KV821670.1 Genbank gene 54670 55230 . - . ID=gene-HMPREF3052_11050;Name=HMPREF3052_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11050 GCA_001815685.1|KV821670.1 Protein Homology CDS 54670 55230 . - 0 ID=cds-OFO24348.1;Parent=gene-HMPREF3052_11050;Dbxref=NCBI_GP:OFO24348.1;Name=OFO24348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270169.1;locus_tag=HMPREF3052_11050;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=OFO24348.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank pseudogene 55279 55833 . - . ID=gene-HMPREF3052_11055;Name=HMPREF3052_11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_11055;pseudo=true GCA_001815685.1|KV821670.1 Protein Homology CDS 55279 55833 . - 0 ID=cds-HMPREF3052_11055;Parent=gene-HMPREF3052_11055;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679554.1;locus_tag=HMPREF3052_11055;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 55907 56416 . - . ID=gene-HMPREF3052_11060;Name=HMPREF3052_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11060 GCA_001815685.1|KV821670.1 Protein Homology CDS 55907 56416 . - 0 ID=cds-OFO24333.1;Parent=gene-HMPREF3052_11060;Dbxref=NCBI_GP:OFO24333.1;Name=OFO24333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679555.1;locus_tag=HMPREF3052_11060;product=hypothetical protein;protein_id=OFO24333.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 56479 57963 . - . ID=gene-HMPREF3052_11065;Name=HMPREF3052_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11065 GCA_001815685.1|KV821670.1 Protein Homology CDS 56479 57963 . - 0 ID=cds-OFO24334.1;Parent=gene-HMPREF3052_11065;Dbxref=NCBI_GP:OFO24334.1;Name=OFO24334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003708970.1;locus_tag=HMPREF3052_11065;product=cytochrome c oxidase accessory protein CcoG;protein_id=OFO24334.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 58412 60391 . + . ID=gene-HMPREF3052_11070;Name=HMPREF3052_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11070 GCA_001815685.1|KV821670.1 Protein Homology CDS 58412 60391 . + 0 ID=cds-OFO24335.1;Parent=gene-HMPREF3052_11070;Dbxref=NCBI_GP:OFO24335.1;Name=OFO24335.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212980.1;locus_tag=HMPREF3052_11070;product=transketolase;protein_id=OFO24335.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 60458 62737 . - . ID=gene-HMPREF3052_11075;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=HMPREF3052_11075 GCA_001815685.1|KV821670.1 Protein Homology CDS 60458 62737 . - 0 ID=cds-OFO24336.1;Parent=gene-HMPREF3052_11075;Dbxref=NCBI_GP:OFO24336.1;Name=OFO24336.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746132.1;locus_tag=HMPREF3052_11075;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=OFO24336.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 62741 63052 . - . ID=gene-HMPREF3052_11080;Name=HMPREF3052_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11080 GCA_001815685.1|KV821670.1 Protein Homology CDS 62741 63052 . - 0 ID=cds-OFO24337.1;Parent=gene-HMPREF3052_11080;Dbxref=NCBI_GP:OFO24337.1;Name=OFO24337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JV14.1;locus_tag=HMPREF3052_11080;product=ATP-dependent Clp protease adaptor ClpS;protein_id=OFO24337.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 63309 63512 . + . ID=gene-HMPREF3052_11085;Name=HMPREF3052_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11085 GCA_001815685.1|KV821670.1 Protein Homology CDS 63309 63512 . + 0 ID=cds-OFO24338.1;Parent=gene-HMPREF3052_11085;Dbxref=NCBI_GP:OFO24338.1;Name=OFO24338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006478030.1;locus_tag=HMPREF3052_11085;product=cold-shock protein;protein_id=OFO24338.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 63588 63803 . + . ID=gene-HMPREF3052_11090;Name=HMPREF3052_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11090 GCA_001815685.1|KV821670.1 Protein Homology CDS 63588 63803 . + 0 ID=cds-OFO24339.1;Parent=gene-HMPREF3052_11090;Dbxref=NCBI_GP:OFO24339.1;Name=OFO24339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679564.1;locus_tag=HMPREF3052_11090;product=branched-chain amino acid ABC transporter;protein_id=OFO24339.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 63888 64334 . + . ID=gene-HMPREF3052_11095;Name=HMPREF3052_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11095 GCA_001815685.1|KV821670.1 Protein Homology CDS 63888 64334 . + 0 ID=cds-OFO24340.1;Parent=gene-HMPREF3052_11095;Dbxref=NCBI_GP:OFO24340.1;Name=OFO24340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273200.1;locus_tag=HMPREF3052_11095;product=SsrA-binding protein;protein_id=OFO24340.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 64406 64846 . + . ID=gene-HMPREF3052_11100;Name=HMPREF3052_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11100 GCA_001815685.1|KV821670.1 Protein Homology CDS 64406 64846 . + 0 ID=cds-OFO24341.1;Parent=gene-HMPREF3052_11100;Dbxref=NCBI_GP:OFO24341.1;Name=OFO24341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682952.1;locus_tag=HMPREF3052_11100;product=hypothetical protein;protein_id=OFO24341.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 64917 65402 . - . ID=gene-HMPREF3052_11105;Name=HMPREF3052_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11105 GCA_001815685.1|KV821670.1 Protein Homology CDS 64917 65402 . - 0 ID=cds-OFO24342.1;Parent=gene-HMPREF3052_11105;Dbxref=NCBI_GP:OFO24342.1;Name=OFO24342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520796.1;locus_tag=HMPREF3052_11105;product=hypothetical protein;protein_id=OFO24342.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 65573 66523 . - . ID=gene-HMPREF3052_11110;Name=HMPREF3052_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11110 GCA_001815685.1|KV821670.1 Protein Homology CDS 65573 66523 . - 0 ID=cds-OFO24343.1;Parent=gene-HMPREF3052_11110;Dbxref=NCBI_GP:OFO24343.1;Name=OFO24343.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743113.1;locus_tag=HMPREF3052_11110;product=thioredoxin-disulfide reductase;protein_id=OFO24343.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 66632 67927 . - . ID=gene-HMPREF3052_11115;Name=HMPREF3052_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11115 GCA_001815685.1|KV821670.1 Protein Homology CDS 66632 67927 . - 0 ID=cds-OFO24344.1;Parent=gene-HMPREF3052_11115;Dbxref=NCBI_GP:OFO24344.1;Name=OFO24344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685744.1;locus_tag=HMPREF3052_11115;product=oxidoreductase;protein_id=OFO24344.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 68077 68964 . - . ID=gene-HMPREF3052_11120;Name=HMPREF3052_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11120 GCA_001815685.1|KV821670.1 Protein Homology CDS 68077 68964 . - 0 ID=cds-OFO24345.1;Parent=gene-HMPREF3052_11120;Dbxref=NCBI_GP:OFO24345.1;Name=OFO24345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679574.1;locus_tag=HMPREF3052_11120;product=polyamine ABC transporter permease;protein_id=OFO24345.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 68964 69929 . - . ID=gene-HMPREF3052_11125;Name=HMPREF3052_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11125 GCA_001815685.1|KV821670.1 Protein Homology CDS 68964 69929 . - 0 ID=cds-OFO24346.1;Parent=gene-HMPREF3052_11125;Dbxref=NCBI_GP:OFO24346.1;Name=OFO24346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713503.1;locus_tag=HMPREF3052_11125;product=putrescine/spermidine ABC transporter permease;protein_id=OFO24346.1;transl_table=11 GCA_001815685.1|KV821670.1 Genbank gene 69945 71069 . - . ID=gene-HMPREF3052_11130;Name=HMPREF3052_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3052_11130 GCA_001815685.1|KV821670.1 Protein Homology CDS 69945 71069 . - 0 ID=cds-OFO24347.1;Parent=gene-HMPREF3052_11130;Dbxref=NCBI_GP:OFO24347.1;Name=OFO24347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746147.1;locus_tag=HMPREF3052_11130;product=transporter;protein_id=OFO24347.1;transl_table=11 ##sequence-region KV821671.1 1 553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739544 GCA_001815685.1|KV821671.1 Genbank region 1 553 . + . ID=KV821671.1:1..553;Dbxref=HMP:3052,taxon:1739544;gbkey=Src;genome=genomic;isolation-source=trach aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC056A03 GCA_001815685.1|KV821671.1 Genbank pseudogene 1 553 . + . ID=gene-HMPREF3052_11135;Name=HMPREF3052_11135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3052_11135;pseudo=true GCA_001815685.1|KV821671.1 GeneMarkS+ CDS 1 553 . + 1 ID=cds-HMPREF3052_11135;Parent=gene-HMPREF3052_11135;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3052_11135;product=hypothetical protein;pseudo=true;transl_table=11 ###