##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM100827v1 #!genome-build-accession NCBI_Assembly:GCA_001008275.1 #!annotation-date 05/05/2015 15:17:21 #!annotation-source NCBI ##sequence-region LCTH01000001.1 1 3069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000001.1 Genbank region 1 3069 . + . ID=LCTH01000001.1:1..3069;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000001.1 Genbank gene 1 2835 . - . ID=gene-AAX15_00005;Name=AAX15_00005;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_00005;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000001.1 Genbank rRNA 1 2835 . - . ID=rna-AAX15_00005;Parent=gene-AAX15_00005;gbkey=rRNA;locus_tag=AAX15_00005;partial=true;product=23S ribosomal RNA;start_range=.,1 GCA_001008275.1|LCTH01000001.1 Genbank exon 1 2835 . - . ID=exon-AAX15_00005-1;Parent=rna-AAX15_00005;gbkey=rRNA;locus_tag=AAX15_00005;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region LCTH01000002.1 1 53089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000002.1 Genbank region 1 53089 . + . ID=LCTH01000002.1:1..53089;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000002.1 Genbank gene 129 1058 . + . ID=gene-AAX15_00010;Name=AAX15_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00010 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 129 1058 . + 0 ID=cds-KKZ57533.1;Parent=gene-AAX15_00010;Dbxref=NCBI_GP:KKZ57533.1;Name=KKZ57533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635860.1;locus_tag=AAX15_00010;product=LysR family transcriptional regulator;protein_id=KKZ57533.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 1068 1802 . + . ID=gene-AAX15_00015;Name=AAX15_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00015 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 1068 1802 . + 0 ID=cds-KKZ57534.1;Parent=gene-AAX15_00015;Dbxref=NCBI_GP:KKZ57534.1;Name=KKZ57534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644701.1;locus_tag=AAX15_00015;product=branched-chain amino acid transporter AzlC;protein_id=KKZ57534.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 1799 2128 . + . ID=gene-AAX15_00020;Name=AAX15_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00020 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 1799 2128 . + 0 ID=cds-KKZ57535.1;Parent=gene-AAX15_00020;Dbxref=NCBI_GP:KKZ57535.1;Name=KKZ57535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638861.1;locus_tag=AAX15_00020;product=branched-chain amino acid ABC transporter;protein_id=KKZ57535.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 2567 2800 . + . ID=gene-AAX15_00025;Name=AAX15_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00025 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 2567 2800 . + 0 ID=cds-KKZ57536.1;Parent=gene-AAX15_00025;Dbxref=NCBI_GP:KKZ57536.1;Name=KKZ57536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500964.1;locus_tag=AAX15_00025;product=membrane protein;protein_id=KKZ57536.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 2876 4459 . - . ID=gene-AAX15_00030;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AAX15_00030 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 2876 4459 . - 0 ID=cds-KKZ57537.1;Parent=gene-AAX15_00030;Dbxref=NCBI_GP:KKZ57537.1;Name=KKZ57537.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638857.1;locus_tag=AAX15_00030;product=peptide chain release factor 3;protein_id=KKZ57537.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 4638 5426 . + . ID=gene-AAX15_00035;Name=AAX15_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00035 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 4638 5426 . + 0 ID=cds-KKZ57538.1;Parent=gene-AAX15_00035;Dbxref=NCBI_GP:KKZ57538.1;Name=KKZ57538.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356566.1;locus_tag=AAX15_00035;product=enoyl-ACP reductase;protein_id=KKZ57538.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 5491 7470 . + . ID=gene-AAX15_00040;Name=AAX15_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00040 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 5491 7470 . + 0 ID=cds-KKZ57539.1;Parent=gene-AAX15_00040;Dbxref=NCBI_GP:KKZ57539.1;Name=KKZ57539.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500968.1;locus_tag=AAX15_00040;product=exoribonuclease II;protein_id=KKZ57539.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 7717 10359 . - . ID=gene-AAX15_00045;Name=AAX15_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00045 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 7717 10359 . - 0 ID=cds-KKZ57540.1;Parent=gene-AAX15_00045;Dbxref=NCBI_GP:KKZ57540.1;Name=KKZ57540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643730.1;locus_tag=AAX15_00045;product=DNA gyrase subunit A;protein_id=KKZ57540.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 10928 12691 . - . ID=gene-AAX15_00050;Name=AAX15_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00050 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 10928 12691 . - 0 ID=cds-KKZ57541.1;Parent=gene-AAX15_00050;Dbxref=NCBI_GP:KKZ57541.1;Name=KKZ57541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657555.1;locus_tag=AAX15_00050;product=ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=KKZ57541.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 12829 13221 . - . ID=gene-AAX15_00055;Name=AAX15_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00055 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 12829 13221 . - 0 ID=cds-KKZ57542.1;Parent=gene-AAX15_00055;Dbxref=NCBI_GP:KKZ57542.1;Name=KKZ57542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44145.1;locus_tag=AAX15_00055;product=hypothetical protein;protein_id=KKZ57542.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 13536 14342 . + . ID=gene-AAX15_00060;Name=AAX15_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00060 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 13536 14342 . + 0 ID=cds-KKZ57543.1;Parent=gene-AAX15_00060;Dbxref=NCBI_GP:KKZ57543.1;Name=KKZ57543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646671.1;locus_tag=AAX15_00060;product=hypothetical protein;protein_id=KKZ57543.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 14339 15037 . - . ID=gene-AAX15_00065;Name=AAX15_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00065 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 14339 15037 . - 0 ID=cds-KKZ57544.1;Parent=gene-AAX15_00065;Dbxref=NCBI_GP:KKZ57544.1;Name=KKZ57544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643739.1;locus_tag=AAX15_00065;product=SAM-dependent methyltransferase;protein_id=KKZ57544.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 15071 15772 . + . ID=gene-AAX15_00070;Name=AAX15_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00070 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 15071 15772 . + 0 ID=cds-KKZ57545.1;Parent=gene-AAX15_00070;Dbxref=NCBI_GP:KKZ57545.1;Name=KKZ57545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJZ3.1;locus_tag=AAX15_00070;product=hydroxyacylglutathione hydrolase;protein_id=KKZ57545.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 15816 16676 . - . ID=gene-AAX15_00075;Name=AAX15_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00075 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 15816 16676 . - 0 ID=cds-KKZ57546.1;Parent=gene-AAX15_00075;Dbxref=NCBI_GP:KKZ57546.1;Name=KKZ57546.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:E1X791.1;locus_tag=AAX15_00075;product=tellurite resistance protein TehB;protein_id=KKZ57546.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 16789 18837 . - . ID=gene-AAX15_00080;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AAX15_00080 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 16789 18837 . - 0 ID=cds-KKZ57547.1;Parent=gene-AAX15_00080;Dbxref=NCBI_GP:KKZ57547.1;Name=KKZ57547.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJZ5.1;locus_tag=AAX15_00080;product=methionine--tRNA ligase;protein_id=KKZ57547.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 18988 20100 . + . ID=gene-AAX15_00085;Name=AAX15_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00085 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 18988 20100 . + 0 ID=cds-KKZ57548.1;Parent=gene-AAX15_00085;Dbxref=NCBI_GP:KKZ57548.1;Name=KKZ57548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650273.1;locus_tag=AAX15_00085;product=sodium:proton antiporter;protein_id=KKZ57548.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 20325 20594 . + . ID=gene-AAX15_00090;Name=AAX15_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00090 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 20325 20594 . + 0 ID=cds-KKZ57549.1;Parent=gene-AAX15_00090;Dbxref=NCBI_GP:KKZ57549.1;Name=KKZ57549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995905.1;locus_tag=AAX15_00090;product=antitoxin MazE;protein_id=KKZ57549.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 20594 20947 . + . ID=gene-AAX15_00095;Name=AAX15_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00095 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 20594 20947 . + 0 ID=cds-KKZ57550.1;Parent=gene-AAX15_00095;Dbxref=NCBI_GP:KKZ57550.1;Name=KKZ57550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646660.1;locus_tag=AAX15_00095;product=growth inhibitor PemK;protein_id=KKZ57550.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 20981 21643 . - . ID=gene-AAX15_00100;Name=AAX15_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00100 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 20981 21643 . - 0 ID=cds-KKZ57551.1;Parent=gene-AAX15_00100;Dbxref=NCBI_GP:KKZ57551.1;Name=KKZ57551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646532.1;locus_tag=AAX15_00100;product=NAD(P)H nitroreductase;protein_id=KKZ57551.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 21756 22430 . + . ID=gene-AAX15_00105;Name=AAX15_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00105 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 21756 22430 . + 0 ID=cds-KKZ57552.1;Parent=gene-AAX15_00105;Dbxref=NCBI_GP:KKZ57552.1;Name=KKZ57552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636986.1;locus_tag=AAX15_00105;product=acylneuraminate cytidylyltransferase;protein_id=KKZ57552.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 22864 23463 . + . ID=gene-AAX15_00110;Name=AAX15_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00110 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 22864 23463 . + 0 ID=cds-KKZ57553.1;Parent=gene-AAX15_00110;Dbxref=NCBI_GP:KKZ57553.1;Name=KKZ57553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636983.1;locus_tag=AAX15_00110;product=electron transporter;protein_id=KKZ57553.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 23506 25527 . + . ID=gene-AAX15_00115;Name=AAX15_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00115 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 23506 25527 . + 0 ID=cds-KKZ57554.1;Parent=gene-AAX15_00115;Dbxref=NCBI_GP:KKZ57554.1;Name=KKZ57554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636982.1;locus_tag=AAX15_00115;product=hydrogenase 4 subunit B;protein_id=KKZ57554.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 25537 26499 . + . ID=gene-AAX15_00120;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=AAX15_00120 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 25537 26499 . + 0 ID=cds-KKZ57555.1;Parent=gene-AAX15_00120;Dbxref=NCBI_GP:KKZ57555.1;Name=KKZ57555.1;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636981.1;locus_tag=AAX15_00120;product=hydrogenase 3 membrane subunit;protein_id=KKZ57555.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 26509 27954 . + . ID=gene-AAX15_00125;Name=AAX15_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00125 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 26509 27954 . + 0 ID=cds-KKZ57556.1;Parent=gene-AAX15_00125;Dbxref=NCBI_GP:KKZ57556.1;Name=KKZ57556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499957.1;locus_tag=AAX15_00125;product=hydrogenase 4 subunit D;protein_id=KKZ57556.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 27965 28603 . + . ID=gene-AAX15_00130;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=AAX15_00130 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 27965 28603 . + 0 ID=cds-KKZ57557.1;Parent=gene-AAX15_00130;Dbxref=NCBI_GP:KKZ57557.1;Name=KKZ57557.1;Note=interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hyfE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499956.1;locus_tag=AAX15_00130;product=hydrogenase 4 membrane subunit;protein_id=KKZ57557.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 28608 30146 . + . ID=gene-AAX15_00135;Name=AAX15_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00135 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 28608 30146 . + 0 ID=cds-KKZ57558.1;Parent=gene-AAX15_00135;Dbxref=NCBI_GP:KKZ57558.1;Name=KKZ57558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578945.1;locus_tag=AAX15_00135;product=hydrogenase;protein_id=KKZ57558.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 30166 31896 . + . ID=gene-AAX15_00140;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=AAX15_00140 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 30166 31896 . + 0 ID=cds-KKZ57559.1;Parent=gene-AAX15_00140;Dbxref=NCBI_GP:KKZ57559.1;Name=KKZ57559.1;Note=formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697674.1;locus_tag=AAX15_00140;product=hydrogenase 3 large subunit;protein_id=KKZ57559.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 31907 32482 . + . ID=gene-AAX15_00145;Name=AAX15_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00145 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 31907 32482 . + 0 ID=cds-KKZ57560.1;Parent=gene-AAX15_00145;Dbxref=NCBI_GP:KKZ57560.1;Name=KKZ57560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626087.1;locus_tag=AAX15_00145;product=hydrogenase;protein_id=KKZ57560.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 32479 33255 . + . ID=gene-AAX15_00150;Name=AAX15_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00150 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 32479 33255 . + 0 ID=cds-KKZ57561.1;Parent=gene-AAX15_00150;Dbxref=NCBI_GP:KKZ57561.1;Name=KKZ57561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547344.1;locus_tag=AAX15_00150;product=hydrogenase;protein_id=KKZ57561.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 33510 33917 . + . ID=gene-AAX15_00155;Name=AAX15_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00155 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 33510 33917 . + 0 ID=cds-KKZ57562.1;Parent=gene-AAX15_00155;Dbxref=NCBI_GP:KKZ57562.1;Name=KKZ57562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700901.1;locus_tag=AAX15_00155;product=formate hydrogenlyase maturation protein HycH;protein_id=KKZ57562.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 33910 34368 . + . ID=gene-AAX15_00160;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=AAX15_00160 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 33910 34368 . + 0 ID=cds-KKZ57563.1;Parent=gene-AAX15_00160;Dbxref=NCBI_GP:KKZ57563.1;Name=KKZ57563.1;Note=involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE;gbkey=CDS;gene=hycI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645511.1;locus_tag=AAX15_00160;product=hydrogenase 3 maturation protease;protein_id=KKZ57563.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 34449 36725 . - . ID=gene-AAX15_00165;Name=AAX15_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00165 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 34449 36725 . - 0 ID=cds-KKZ57564.1;Parent=gene-AAX15_00165;Dbxref=NCBI_GP:KKZ57564.1;Name=KKZ57564.1;Note=carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631950.1;locus_tag=AAX15_00165;product=carbamoyl phosphate phosphatase;protein_id=KKZ57564.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 36825 37568 . - . ID=gene-AAX15_00170;Name=AAX15_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00170 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 36825 37568 . - 0 ID=cds-KKZ57565.1;Parent=gene-AAX15_00170;Dbxref=NCBI_GP:KKZ57565.1;Name=KKZ57565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640555.1;locus_tag=AAX15_00170;product=hypothetical protein;protein_id=KKZ57565.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 37702 38907 . + . ID=gene-AAX15_00175;Name=AAX15_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00175 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 37702 38907 . + 0 ID=cds-KKZ57576.1;Parent=gene-AAX15_00175;Dbxref=NCBI_GP:KKZ57576.1;Name=KKZ57576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635234.1;locus_tag=AAX15_00175;product=Lsg locus protein 1;protein_id=KKZ57576.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 38904 39818 . + . ID=gene-AAX15_00180;Name=AAX15_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00180 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 38904 39818 . + 0 ID=cds-KKZ57566.1;Parent=gene-AAX15_00180;Dbxref=NCBI_GP:KKZ57566.1;Name=KKZ57566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636790.1;locus_tag=AAX15_00180;product=CMP-N-acetylneuraminate-beta-galactosamide-alpha-2%2C 3-sialyltransferase;protein_id=KKZ57566.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 39820 40881 . + . ID=gene-AAX15_00185;Name=AAX15_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00185 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 39820 40881 . + 0 ID=cds-KKZ57567.1;Parent=gene-AAX15_00185;Dbxref=NCBI_GP:KKZ57567.1;Name=KKZ57567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499941.1;locus_tag=AAX15_00185;product=glycosyl transferase family 1;protein_id=KKZ57567.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 40893 41666 . + . ID=gene-AAX15_00190;Name=AAX15_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00190 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 40893 41666 . + 0 ID=cds-KKZ57568.1;Parent=gene-AAX15_00190;Dbxref=NCBI_GP:KKZ57568.1;Name=KKZ57568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688021.1;locus_tag=AAX15_00190;product=Lsg locus protein 4;protein_id=KKZ57568.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 41678 42562 . + . ID=gene-AAX15_00195;Name=AAX15_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00195 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 41678 42562 . + 0 ID=cds-KKZ57569.1;Parent=gene-AAX15_00195;Dbxref=NCBI_GP:KKZ57569.1;Name=KKZ57569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995796.1;locus_tag=AAX15_00195;product=glycosyltransferase;protein_id=KKZ57569.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 42564 43367 . + . ID=gene-AAX15_00200;Name=AAX15_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00200 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 42564 43367 . + 0 ID=cds-KKZ57570.1;Parent=gene-AAX15_00200;Dbxref=NCBI_GP:KKZ57570.1;Name=KKZ57570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702482.1;locus_tag=AAX15_00200;product=amylovoran biosynthesis protein AmsE;protein_id=KKZ57570.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 43376 44470 . + . ID=gene-AAX15_00205;Name=AAX15_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00205 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 43376 44470 . + 0 ID=cds-KKZ57571.1;Parent=gene-AAX15_00205;Dbxref=NCBI_GP:KKZ57571.1;Name=KKZ57571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635222.1;locus_tag=AAX15_00205;product=lytic transglycosylase;protein_id=KKZ57571.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 44559 45725 . + . ID=gene-AAX15_00210;Name=AAX15_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00210 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 44559 45725 . + 0 ID=cds-KKZ57572.1;Parent=gene-AAX15_00210;Dbxref=NCBI_GP:KKZ57572.1;Name=KKZ57572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005753497.1;locus_tag=AAX15_00210;product=hypothetical protein;protein_id=KKZ57572.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 46018 47547 . - . ID=gene-AAX15_00215;Name=AAX15_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00215 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 46018 47547 . - 0 ID=cds-KKZ57577.1;Parent=gene-AAX15_00215;Dbxref=NCBI_GP:KKZ57577.1;Name=KKZ57577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524916.1;locus_tag=AAX15_00215;product=hypothetical protein;protein_id=KKZ57577.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 48772 49908 . - . ID=gene-AAX15_00220;Name=AAX15_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00220 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 48772 49908 . - 0 ID=cds-KKZ57573.1;Parent=gene-AAX15_00220;Dbxref=NCBI_GP:KKZ57573.1;Name=KKZ57573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524697.1;locus_tag=AAX15_00220;product=hypothetical protein;protein_id=KKZ57573.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 49916 51049 . - . ID=gene-AAX15_00225;Name=AAX15_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00225 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 49916 51049 . - 0 ID=cds-KKZ57574.1;Parent=gene-AAX15_00225;Dbxref=NCBI_GP:KKZ57574.1;Name=KKZ57574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640606.1;locus_tag=AAX15_00225;product=hypothetical protein;protein_id=KKZ57574.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 51062 52195 . - . ID=gene-AAX15_00230;Name=AAX15_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00230 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 51062 52195 . - 0 ID=cds-KKZ57575.1;Parent=gene-AAX15_00230;Dbxref=NCBI_GP:KKZ57575.1;Name=KKZ57575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640606.1;locus_tag=AAX15_00230;product=hypothetical protein;protein_id=KKZ57575.1;transl_table=11 GCA_001008275.1|LCTH01000002.1 Genbank gene 52306 52881 . - . ID=gene-AAX15_00235;Name=AAX15_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00235 GCA_001008275.1|LCTH01000002.1 Protein Homology CDS 52306 52881 . - 0 ID=cds-KKZ57578.1;Parent=gene-AAX15_00235;Dbxref=NCBI_GP:KKZ57578.1;Name=KKZ57578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700209.1;locus_tag=AAX15_00235;product=autotransporter adhesin;protein_id=KKZ57578.1;transl_table=11 ##sequence-region LCTH01000003.1 1 18447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000003.1 Genbank region 1 18447 . + . ID=LCTH01000003.1:1..18447;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000003.1 Genbank gene 1 616 . + . ID=gene-AAX15_00240;Name=AAX15_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00240;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 1 616 . + 1 ID=cds-KKZ57348.1;Parent=gene-AAX15_00240;Dbxref=NCBI_GP:KKZ57348.1;Name=KKZ57348.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44770.1;locus_tag=AAX15_00240;partial=true;product=ornithine carbamoyltransferase;protein_id=KKZ57348.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 626 1558 . + . ID=gene-AAX15_00245;Name=AAX15_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00245 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 626 1558 . + 0 ID=cds-KKZ57349.1;Parent=gene-AAX15_00245;Dbxref=NCBI_GP:KKZ57349.1;Name=KKZ57349.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692790.1;locus_tag=AAX15_00245;product=carbamate kinase;protein_id=KKZ57349.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 1664 3193 . + . ID=gene-AAX15_00250;Name=AAX15_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00250 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 1664 3193 . + 0 ID=cds-KKZ57350.1;Parent=gene-AAX15_00250;Dbxref=NCBI_GP:KKZ57350.1;Name=KKZ57350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636097.1;locus_tag=AAX15_00250;product=hypothetical protein;protein_id=KKZ57350.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 3287 3754 . + . ID=gene-AAX15_00255;Name=AAX15_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00255 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 3287 3754 . + 0 ID=cds-KKZ57351.1;Parent=gene-AAX15_00255;Dbxref=NCBI_GP:KKZ57351.1;Name=KKZ57351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632202.1;locus_tag=AAX15_00255;product=AsnC family transcriptional regulator;protein_id=KKZ57351.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 3836 4540 . + . ID=gene-AAX15_00260;Name=AAX15_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00260 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 3836 4540 . + 0 ID=cds-KKZ57352.1;Parent=gene-AAX15_00260;Dbxref=NCBI_GP:KKZ57352.1;Name=KKZ57352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMU5.1;locus_tag=AAX15_00260;product=peptidase E;protein_id=KKZ57352.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 4558 5853 . + . ID=gene-AAX15_00265;Name=AAX15_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00265 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 4558 5853 . + 0 ID=cds-KKZ57353.1;Parent=gene-AAX15_00265;Dbxref=NCBI_GP:KKZ57353.1;Name=KKZ57353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627117.1;locus_tag=AAX15_00265;product=C4-dicarboxylate ABC transporter;protein_id=KKZ57353.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 5924 7195 . + . ID=gene-AAX15_00270;Name=AAX15_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00270 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 5924 7195 . + 0 ID=cds-KKZ57354.1;Parent=gene-AAX15_00270;Dbxref=NCBI_GP:KKZ57354.1;Name=KKZ57354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499657.1;locus_tag=AAX15_00270;product=peptidase M20;protein_id=KKZ57354.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 7288 9261 . + . ID=gene-AAX15_00275;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AAX15_00275 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 7288 9261 . + 0 ID=cds-KKZ57355.1;Parent=gene-AAX15_00275;Dbxref=NCBI_GP:KKZ57355.1;Name=KKZ57355.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661784.1;locus_tag=AAX15_00275;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=KKZ57355.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 9347 9739 . - . ID=gene-AAX15_00280;Name=AAX15_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00280 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 9347 9739 . - 0 ID=cds-KKZ57356.1;Parent=gene-AAX15_00280;Dbxref=NCBI_GP:KKZ57356.1;Name=KKZ57356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005709773.1;locus_tag=AAX15_00280;product=MerR family transcriptional regulator;protein_id=KKZ57356.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 9764 10441 . - . ID=gene-AAX15_00285;Name=AAX15_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00285 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 9764 10441 . - 0 ID=cds-KKZ57357.1;Parent=gene-AAX15_00285;Dbxref=NCBI_GP:KKZ57357.1;Name=KKZ57357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638352.1;locus_tag=AAX15_00285;product=cytochrome C1;protein_id=KKZ57357.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 10950 12839 . + . ID=gene-AAX15_00290;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=AAX15_00290 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 10950 12839 . + 0 ID=cds-KKZ57358.1;Parent=gene-AAX15_00290;Dbxref=NCBI_GP:KKZ57358.1;Name=KKZ57358.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UHB8.1;locus_tag=AAX15_00290;product=tRNA uridine 5-carboxymethylaminomethyl modification protein;protein_id=KKZ57358.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 13010 13621 . + . ID=gene-AAX15_00295;Name=AAX15_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00295 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 13010 13621 . + 0 ID=cds-KKZ57359.1;Parent=gene-AAX15_00295;Dbxref=NCBI_GP:KKZ57359.1;Name=KKZ57359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644237.1;locus_tag=AAX15_00295;product=16S rRNA methyltransferase;protein_id=KKZ57359.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 13747 14121 . + . ID=gene-AAX15_00300;Name=AAX15_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00300 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 13747 14121 . + 0 ID=cds-KKZ57360.1;Parent=gene-AAX15_00300;Dbxref=NCBI_GP:KKZ57360.1;Name=KKZ57360.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635315.1;locus_tag=AAX15_00300;product=ATP F0F1 synthase subunit I;protein_id=KKZ57360.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 14158 14955 . + . ID=gene-AAX15_00305;Name=AAX15_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00305 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 14158 14955 . + 0 ID=cds-KKZ57361.1;Parent=gene-AAX15_00305;Dbxref=NCBI_GP:KKZ57361.1;Name=KKZ57361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499666.1;locus_tag=AAX15_00305;product=ATP synthase F0F1 subunit A;protein_id=KKZ57361.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 15004 15258 . + . ID=gene-AAX15_00310;Name=AAX15_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00310 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 15004 15258 . + 0 ID=cds-KKZ57362.1;Parent=gene-AAX15_00310;Dbxref=NCBI_GP:KKZ57362.1;Name=KKZ57362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632219.1;locus_tag=AAX15_00310;product=ATP synthase subunit C;protein_id=KKZ57362.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 15297 15767 . + . ID=gene-AAX15_00315;Name=AAX15_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00315 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 15297 15767 . + 0 ID=cds-KKZ57363.1;Parent=gene-AAX15_00315;Dbxref=NCBI_GP:KKZ57363.1;Name=KKZ57363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499667.1;locus_tag=AAX15_00315;product=ATP synthase subunit B;protein_id=KKZ57363.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 15780 16313 . + . ID=gene-AAX15_00320;Name=AAX15_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00320 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 15780 16313 . + 0 ID=cds-KKZ57364.1;Parent=gene-AAX15_00320;Dbxref=NCBI_GP:KKZ57364.1;Name=KKZ57364.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064468.1;locus_tag=AAX15_00320;product=ATP F0F1 synthase subunit delta;protein_id=KKZ57364.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 16326 17867 . + . ID=gene-AAX15_00325;Name=AAX15_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00325 GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 16326 17867 . + 0 ID=cds-KKZ57365.1;Parent=gene-AAX15_00325;Dbxref=NCBI_GP:KKZ57365.1;Name=KKZ57365.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QN62.1;locus_tag=AAX15_00325;product=ATP F0F1 synthase subunit alpha;protein_id=KKZ57365.1;transl_table=11 GCA_001008275.1|LCTH01000003.1 Genbank gene 17883 18447 . + . ID=gene-AAX15_00330;Name=AAX15_00330;end_range=18447,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00330;partial=true GCA_001008275.1|LCTH01000003.1 Protein Homology CDS 17883 18447 . + 0 ID=cds-KKZ57366.1;Parent=gene-AAX15_00330;Dbxref=NCBI_GP:KKZ57366.1;Name=KKZ57366.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;end_range=18447,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995166.1;locus_tag=AAX15_00330;partial=true;product=ATP F0F1 synthase subunit gamma;protein_id=KKZ57366.1;transl_table=11 ##sequence-region LCTH01000004.1 1 22881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000004.1 Genbank region 1 22881 . + . ID=LCTH01000004.1:1..22881;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000004.1 Genbank gene 1 919 . - . ID=gene-AAX15_00335;Name=AAX15_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00335;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 1 919 . - 0 ID=cds-KKZ57294.1;Parent=gene-AAX15_00335;Dbxref=NCBI_GP:KKZ57294.1;Name=KKZ57294.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646004.1;locus_tag=AAX15_00335;partial=true;product=phosphoribosylaminoimidazole synthetase;protein_id=KKZ57294.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 1058 1345 . - . ID=gene-AAX15_00340;Name=AAX15_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00340 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 1058 1345 . - 0 ID=cds-KKZ57295.1;Parent=gene-AAX15_00340;Dbxref=NCBI_GP:KKZ57295.1;Name=KKZ57295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44686.1;locus_tag=AAX15_00340;product=hypothetical protein;protein_id=KKZ57295.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 1553 2929 . + . ID=gene-AAX15_00345;Name=AAX15_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00345 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 1553 2929 . + 0 ID=cds-KKZ57296.1;Parent=gene-AAX15_00345;Dbxref=NCBI_GP:KKZ57296.1;Name=KKZ57296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630036.1;locus_tag=AAX15_00345;product=membrane protein;protein_id=KKZ57296.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 3006 3545 . + . ID=gene-AAX15_00350;Name=AAX15_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00350 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 3006 3545 . + 0 ID=cds-KKZ57297.1;Parent=gene-AAX15_00350;Dbxref=NCBI_GP:KKZ57297.1;Name=KKZ57297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44687.2;locus_tag=AAX15_00350;product=cysteine methyltransferase;protein_id=KKZ57297.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 3542 4213 . + . ID=gene-AAX15_00355;Name=AAX15_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00355 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 3542 4213 . + 0 ID=cds-KKZ57298.1;Parent=gene-AAX15_00355;Dbxref=NCBI_GP:KKZ57298.1;Name=KKZ57298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA85.1;locus_tag=AAX15_00355;product=DNA mismatch repair protein MutH;protein_id=KKZ57298.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 4221 5513 . - . ID=gene-AAX15_00360;Name=AAX15_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00360 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 4221 5513 . - 0 ID=cds-KKZ57299.1;Parent=gene-AAX15_00360;Dbxref=NCBI_GP:KKZ57299.1;Name=KKZ57299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633990.1;locus_tag=AAX15_00360;product=tRNA(Ile)-lysidine synthetase;protein_id=KKZ57299.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 5513 6379 . - . ID=gene-AAX15_00365;Name=AAX15_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00365 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 5513 6379 . - 0 ID=cds-KKZ57300.1;Parent=gene-AAX15_00365;Dbxref=NCBI_GP:KKZ57300.1;Name=KKZ57300.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44690.1;locus_tag=AAX15_00365;product=pyridoxamine kinase;protein_id=KKZ57300.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 6452 7399 . - . ID=gene-AAX15_00370;Name=AAX15_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00370 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 6452 7399 . - 0 ID=cds-KKZ57301.1;Parent=gene-AAX15_00370;Dbxref=NCBI_GP:KKZ57301.1;Name=KKZ57301.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766695.1;locus_tag=AAX15_00370;product=acetyl-CoA carboxylase subunit alpha;protein_id=KKZ57301.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 7488 8273 . - . ID=gene-AAX15_00375;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=AAX15_00375 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 7488 8273 . - 0 ID=cds-KKZ57302.1;Parent=gene-AAX15_00375;Dbxref=NCBI_GP:KKZ57302.1;Name=KKZ57302.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633994.1;locus_tag=AAX15_00375;product=high-affinity zinc transporter membrane component;protein_id=KKZ57302.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 8273 9079 . - . ID=gene-AAX15_00380;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=AAX15_00380 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 8273 9079 . - 0 ID=cds-KKZ57303.1;Parent=gene-AAX15_00380;Dbxref=NCBI_GP:KKZ57303.1;Name=KKZ57303.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766697.1;locus_tag=AAX15_00380;product=zinc ABC transporter ATPase;protein_id=KKZ57303.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 9257 10726 . + . ID=gene-AAX15_00385;Name=AAX15_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00385 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 9257 10726 . + 0 ID=cds-KKZ57304.1;Parent=gene-AAX15_00385;Dbxref=NCBI_GP:KKZ57304.1;Name=KKZ57304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645997.1;locus_tag=AAX15_00385;product=peptidase M23;protein_id=KKZ57304.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 10847 11803 . + . ID=gene-AAX15_00390;Name=AAX15_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00390 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 10847 11803 . + 0 ID=cds-KKZ57305.1;Parent=gene-AAX15_00390;Dbxref=NCBI_GP:KKZ57305.1;Name=KKZ57305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628559.1;locus_tag=AAX15_00390;product=transcriptional regulator;protein_id=KKZ57305.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 11815 13176 . - . ID=gene-AAX15_00395;Name=AAX15_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00395 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 11815 13176 . - 0 ID=cds-KKZ57306.1;Parent=gene-AAX15_00395;Dbxref=NCBI_GP:KKZ57306.1;Name=KKZ57306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637382.1;locus_tag=AAX15_00395;product=GTPase HflX;protein_id=KKZ57306.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 13191 13466 . - . ID=gene-AAX15_00400;Name=AAX15_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00400 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 13191 13466 . - 0 ID=cds-KKZ57307.1;Parent=gene-AAX15_00400;Dbxref=NCBI_GP:KKZ57307.1;Name=KKZ57307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630053.1;locus_tag=AAX15_00400;product=RNA-binding protein Hfq;protein_id=KKZ57307.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 13558 14526 . - . ID=gene-AAX15_00405;Name=AAX15_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00405 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 13558 14526 . - 0 ID=cds-KKZ57308.1;Parent=gene-AAX15_00405;Dbxref=NCBI_GP:KKZ57308.1;Name=KKZ57308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766701.1;locus_tag=AAX15_00405;product=23S rRNA pseudouridylate synthase;protein_id=KKZ57308.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 14938 17757 . + . ID=gene-AAX15_00410;Name=AAX15_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00410 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 14938 17757 . + 0 ID=cds-KKZ57309.1;Parent=gene-AAX15_00410;Dbxref=NCBI_GP:KKZ57309.1;Name=KKZ57309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645579.1;locus_tag=AAX15_00410;product=ribonuclease E;protein_id=KKZ57309.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 17910 17999 . + . ID=gene-AAX15_00415;Name=AAX15_00415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_00415 GCA_001008275.1|LCTH01000004.1 tRNAscan-SE tRNA 17910 17999 . + . ID=rna-AAX15_00415;Parent=gene-AAX15_00415;anticodon=(pos:17944..17946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00415;product=tRNA-Ser GCA_001008275.1|LCTH01000004.1 tRNAscan-SE exon 17910 17999 . + . ID=exon-AAX15_00415-1;Parent=rna-AAX15_00415;anticodon=(pos:17944..17946);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00415;product=tRNA-Ser GCA_001008275.1|LCTH01000004.1 Genbank gene 18051 18638 . - . ID=gene-AAX15_00420;Name=AAX15_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00420 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 18051 18638 . - 0 ID=cds-KKZ57310.1;Parent=gene-AAX15_00420;Dbxref=NCBI_GP:KKZ57310.1;Name=KKZ57310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766703.1;locus_tag=AAX15_00420;product=primosomal replication protein N;protein_id=KKZ57310.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 18671 20023 . - . ID=gene-AAX15_00425;Name=AAX15_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00425 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 18671 20023 . - 0 ID=cds-KKZ57311.1;Parent=gene-AAX15_00425;Dbxref=NCBI_GP:KKZ57311.1;Name=KKZ57311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649062.1;locus_tag=AAX15_00425;product=sodium:proton antiporter;protein_id=KKZ57311.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 20349 21038 . - . ID=gene-AAX15_00430;Name=AAX15_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00430 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 20349 21038 . - 0 ID=cds-KKZ57312.1;Parent=gene-AAX15_00430;Dbxref=NCBI_GP:KKZ57312.1;Name=KKZ57312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691801.1;locus_tag=AAX15_00430;product=ribonuclease T;protein_id=KKZ57312.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 21112 21519 . - . ID=gene-AAX15_00435;Name=AAX15_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00435 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 21112 21519 . - 0 ID=cds-KKZ57313.1;Parent=gene-AAX15_00435;Dbxref=NCBI_GP:KKZ57313.1;Name=KKZ57313.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628548.1;locus_tag=AAX15_00435;product=glyoxalase I;protein_id=KKZ57313.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 21595 22317 . - . ID=gene-AAX15_00440;Name=AAX15_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00440 GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 21595 22317 . - 0 ID=cds-KKZ57314.1;Parent=gene-AAX15_00440;Dbxref=NCBI_GP:KKZ57314.1;Name=KKZ57314.1;Note=catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645197.1;locus_tag=AAX15_00440;product=tRNA methyltransferase;protein_id=KKZ57314.1;transl_table=11 GCA_001008275.1|LCTH01000004.1 Genbank gene 22517 22881 . + . ID=gene-AAX15_00445;Name=AAX15_00445;end_range=22881,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00445;partial=true GCA_001008275.1|LCTH01000004.1 Protein Homology CDS 22517 22881 . + 0 ID=cds-KKZ57315.1;Parent=gene-AAX15_00445;Dbxref=NCBI_GP:KKZ57315.1;Name=KKZ57315.1;end_range=22881,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688987.1;locus_tag=AAX15_00445;partial=true;product=aspartyl-tRNA synthetase;protein_id=KKZ57315.1;transl_table=11 ##sequence-region LCTH01000005.1 1 33101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000005.1 Genbank region 1 33101 . + . ID=LCTH01000005.1:1..33101;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000005.1 Genbank gene 1 1273 . + . ID=gene-AAX15_00450;Name=AAX15_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00450;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 1 1273 . + 1 ID=cds-KKZ57249.1;Parent=gene-AAX15_00450;Dbxref=NCBI_GP:KKZ57249.1;Name=KKZ57249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652844.1;locus_tag=AAX15_00450;partial=true;product=symporter;protein_id=KKZ57249.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 1273 2718 . + . ID=gene-AAX15_00455;Name=AAX15_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00455 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 1273 2718 . + 0 ID=cds-KKZ57250.1;Parent=gene-AAX15_00455;Dbxref=NCBI_GP:KKZ57250.1;Name=KKZ57250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637825.1;locus_tag=AAX15_00455;product=arylsulfatase;protein_id=KKZ57250.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 2793 3605 . + . ID=gene-AAX15_00460;Name=AAX15_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00460 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 2793 3605 . + 0 ID=cds-KKZ57251.1;Parent=gene-AAX15_00460;Dbxref=NCBI_GP:KKZ57251.1;Name=KKZ57251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702203.1;locus_tag=AAX15_00460;product=glucose-6-phosphate 1-epimerase;protein_id=KKZ57251.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 3738 4280 . + . ID=gene-AAX15_00465;Name=AAX15_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00465 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 3738 4280 . + 0 ID=cds-KKZ57252.1;Parent=gene-AAX15_00465;Dbxref=NCBI_GP:KKZ57252.1;Name=KKZ57252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CN42.1;locus_tag=AAX15_00465;product=translation initiation factor IF-3;protein_id=KKZ57252.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 4491 4688 . + . ID=gene-AAX15_00470;Name=AAX15_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00470 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 4491 4688 . + 0 ID=cds-KKZ57274.1;Parent=gene-AAX15_00470;Dbxref=NCBI_GP:KKZ57274.1;Name=KKZ57274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006249241.1;locus_tag=AAX15_00470;product=50S ribosomal protein L35;protein_id=KKZ57274.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 4754 5107 . + . ID=gene-AAX15_00475;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AAX15_00475 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 4754 5107 . + 0 ID=cds-KKZ57253.1;Parent=gene-AAX15_00475;Dbxref=NCBI_GP:KKZ57253.1;Name=KKZ57253.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745267.1;locus_tag=AAX15_00475;product=50S ribosomal protein L20;protein_id=KKZ57253.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 5443 6102 . + . ID=gene-AAX15_00480;Name=AAX15_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00480 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 5443 6102 . + 0 ID=cds-KKZ57254.1;Parent=gene-AAX15_00480;Dbxref=NCBI_GP:KKZ57254.1;Name=KKZ57254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650998.1;locus_tag=AAX15_00480;product=hypothetical protein;protein_id=KKZ57254.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 6197 9805 . + . ID=gene-AAX15_00485;Name=AAX15_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00485 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 6197 9805 . + 0 ID=cds-KKZ57255.1;Parent=gene-AAX15_00485;Dbxref=NCBI_GP:KKZ57255.1;Name=KKZ57255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637822.1;locus_tag=AAX15_00485;product=exodeoxyribonuclease V subunit beta;protein_id=KKZ57255.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 9805 11727 . + . ID=gene-AAX15_00490;Name=AAX15_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00490 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 9805 11727 . + 0 ID=cds-KKZ57256.1;Parent=gene-AAX15_00490;Dbxref=NCBI_GP:KKZ57256.1;Name=KKZ57256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631704.1;locus_tag=AAX15_00490;product=exodeoxyribonuclease V subunit alpha;protein_id=KKZ57256.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 11774 12250 . - . ID=gene-AAX15_00495;Name=AAX15_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00495 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 11774 12250 . - 0 ID=cds-KKZ57257.1;Parent=gene-AAX15_00495;Dbxref=NCBI_GP:KKZ57257.1;Name=KKZ57257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634649.1;locus_tag=AAX15_00495;product=hypothetical protein;protein_id=KKZ57257.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 12309 13262 . + . ID=gene-AAX15_00500;Name=AAX15_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00500 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 12309 13262 . + 0 ID=cds-KKZ57258.1;Parent=gene-AAX15_00500;Dbxref=NCBI_GP:KKZ57258.1;Name=KKZ57258.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660359.1;locus_tag=AAX15_00500;product=aspartate-semialdehyde dehydrogenase;protein_id=KKZ57258.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 13282 13638 . + . ID=gene-AAX15_00505;Name=AAX15_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00505 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 13282 13638 . + 0 ID=cds-KKZ57259.1;Parent=gene-AAX15_00505;Dbxref=NCBI_GP:KKZ57259.1;Name=KKZ57259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500495.1;locus_tag=AAX15_00505;product=hypothetical protein;protein_id=KKZ57259.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 13689 14495 . - . ID=gene-AAX15_00510;Name=AAX15_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00510 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 13689 14495 . - 0 ID=cds-KKZ57260.1;Parent=gene-AAX15_00510;Dbxref=NCBI_GP:KKZ57260.1;Name=KKZ57260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644961.1;locus_tag=AAX15_00510;product=tryptophan synthase subunit alpha;protein_id=KKZ57260.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 14495 15691 . - . ID=gene-AAX15_00515;Name=AAX15_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00515 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 14495 15691 . - 0 ID=cds-KKZ57261.1;Parent=gene-AAX15_00515;Dbxref=NCBI_GP:KKZ57261.1;Name=KKZ57261.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500493.1;locus_tag=AAX15_00515;product=tryptophan synthase subunit beta;protein_id=KKZ57261.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 15709 16470 . - . ID=gene-AAX15_00520;Name=AAX15_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00520 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 15709 16470 . - 0 ID=cds-KKZ57262.1;Parent=gene-AAX15_00520;Dbxref=NCBI_GP:KKZ57262.1;Name=KKZ57262.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634639.1;locus_tag=AAX15_00520;product=malonic semialdehyde reductase;protein_id=KKZ57262.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 16607 17443 . - . ID=gene-AAX15_00525;Name=AAX15_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00525 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 16607 17443 . - 0 ID=cds-KKZ57263.1;Parent=gene-AAX15_00525;Dbxref=NCBI_GP:KKZ57263.1;Name=KKZ57263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500490.1;locus_tag=AAX15_00525;product=hypothetical protein;protein_id=KKZ57263.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 17642 18571 . - . ID=gene-AAX15_00530;Name=AAX15_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00530 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 17642 18571 . - 0 ID=cds-KKZ57264.1;Parent=gene-AAX15_00530;Dbxref=NCBI_GP:KKZ57264.1;Name=KKZ57264.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500489.1;locus_tag=AAX15_00530;product=universal stress protein UspE;protein_id=KKZ57264.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 18704 19477 . - . ID=gene-AAX15_00535;Name=AAX15_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00535 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 18704 19477 . - 0 ID=cds-KKZ57265.1;Parent=gene-AAX15_00535;Dbxref=NCBI_GP:KKZ57265.1;Name=KKZ57265.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641391.1;locus_tag=AAX15_00535;product=transcriptional regulator;protein_id=KKZ57265.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 19762 19847 . + . ID=gene-AAX15_00540;Name=AAX15_00540;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_00540 GCA_001008275.1|LCTH01000005.1 tRNAscan-SE tRNA 19762 19847 . + . ID=rna-AAX15_00540;Parent=gene-AAX15_00540;anticodon=(pos:19796..19798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00540;product=tRNA-Leu GCA_001008275.1|LCTH01000005.1 tRNAscan-SE exon 19762 19847 . + . ID=exon-AAX15_00540-1;Parent=rna-AAX15_00540;anticodon=(pos:19796..19798);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00540;product=tRNA-Leu GCA_001008275.1|LCTH01000005.1 Genbank gene 20531 20848 . + . ID=gene-AAX15_00545;Name=AAX15_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00545 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 20531 20848 . + 0 ID=cds-KKZ57275.1;Parent=gene-AAX15_00545;Dbxref=NCBI_GP:KKZ57275.1;Name=KKZ57275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525949.1;locus_tag=AAX15_00545;product=hypothetical protein;protein_id=KKZ57275.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 21562 22059 . - . ID=gene-AAX15_00550;Name=AAX15_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00550 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 21562 22059 . - 0 ID=cds-KKZ57266.1;Parent=gene-AAX15_00550;Dbxref=NCBI_GP:KKZ57266.1;Name=KKZ57266.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634632.1;locus_tag=AAX15_00550;product=ferritin;protein_id=KKZ57266.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 22077 22562 . - . ID=gene-AAX15_00555;Name=AAX15_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00555 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 22077 22562 . - 0 ID=cds-KKZ57267.1;Parent=gene-AAX15_00555;Dbxref=NCBI_GP:KKZ57267.1;Name=KKZ57267.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43707.2;locus_tag=AAX15_00555;product=ferritin;protein_id=KKZ57267.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 23259 24680 . - . ID=gene-AAX15_00560;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AAX15_00560 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 23259 24680 . - 0 ID=cds-KKZ57268.1;Parent=gene-AAX15_00560;Dbxref=NCBI_GP:KKZ57268.1;Name=KKZ57268.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693979.1;locus_tag=AAX15_00560;product=exonuclease I;protein_id=KKZ57268.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 24693 25568 . - . ID=gene-AAX15_00565;Name=AAX15_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00565 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 24693 25568 . - 0 ID=cds-KKZ57269.1;Parent=gene-AAX15_00565;Dbxref=NCBI_GP:KKZ57269.1;Name=KKZ57269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631685.1;locus_tag=AAX15_00565;product=membrane protein;protein_id=KKZ57269.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 25638 30170 . - . ID=gene-AAX15_00570;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AAX15_00570 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 25638 30170 . - 0 ID=cds-KKZ57270.1;Parent=gene-AAX15_00570;Dbxref=NCBI_GP:KKZ57270.1;Name=KKZ57270.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637805.1;locus_tag=AAX15_00570;product=cell division protein MukB;protein_id=KKZ57270.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 30170 30904 . - . ID=gene-AAX15_00575;Name=AAX15_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00575 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 30170 30904 . - 0 ID=cds-KKZ57271.1;Parent=gene-AAX15_00575;Dbxref=NCBI_GP:KKZ57271.1;Name=KKZ57271.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500482.1;locus_tag=AAX15_00575;product=condesin subunit E;protein_id=KKZ57271.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 31164 32498 . - . ID=gene-AAX15_00580;Name=AAX15_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00580 GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 31164 32498 . - 0 ID=cds-KKZ57272.1;Parent=gene-AAX15_00580;Dbxref=NCBI_GP:KKZ57272.1;Name=KKZ57272.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O30867.1;locus_tag=AAX15_00580;product=condesin subunit F;protein_id=KKZ57272.1;transl_table=11 GCA_001008275.1|LCTH01000005.1 Genbank gene 32972 33101 . + . ID=gene-AAX15_00585;Name=AAX15_00585;end_range=33101,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00585;partial=true GCA_001008275.1|LCTH01000005.1 Protein Homology CDS 32972 33101 . + 0 ID=cds-KKZ57273.1;Parent=gene-AAX15_00585;Dbxref=NCBI_GP:KKZ57273.1;Name=KKZ57273.1;end_range=33101,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500480.1;locus_tag=AAX15_00585;partial=true;product=phosphatidylethanolamine-binding protein;protein_id=KKZ57273.1;transl_table=11 ##sequence-region LCTH01000006.1 1 25831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000006.1 Genbank region 1 25831 . + . ID=LCTH01000006.1:1..25831;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000006.1 Genbank gene 1 1402 . + . ID=gene-AAX15_00590;Name=AAX15_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00590;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 1 1402 . + 1 ID=cds-KKZ57189.1;Parent=gene-AAX15_00590;Dbxref=NCBI_GP:KKZ57189.1;Name=KKZ57189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696691.1;locus_tag=AAX15_00590;partial=true;product=aspartyl-tRNA synthetase;protein_id=KKZ57189.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 1676 2944 . + . ID=gene-AAX15_00595;Name=AAX15_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00595 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 1676 2944 . + 0 ID=cds-KKZ57190.1;Parent=gene-AAX15_00595;Dbxref=NCBI_GP:KKZ57190.1;Name=KKZ57190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064903.1;locus_tag=AAX15_00595;product=membrane protein;protein_id=KKZ57190.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 3046 3498 . + . ID=gene-AAX15_00600;Name=AAX15_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00600 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 3046 3498 . + 0 ID=cds-KKZ57191.1;Parent=gene-AAX15_00600;Dbxref=NCBI_GP:KKZ57191.1;Name=KKZ57191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696687.1;locus_tag=AAX15_00600;product=dihydroneopterin triphosphate pyrophosphatase;protein_id=KKZ57191.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 3511 4251 . + . ID=gene-AAX15_00605;Name=AAX15_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00605 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 3511 4251 . + 0 ID=cds-KKZ57192.1;Parent=gene-AAX15_00605;Dbxref=NCBI_GP:KKZ57192.1;Name=KKZ57192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630070.1;locus_tag=AAX15_00605;product=hypothetical protein;protein_id=KKZ57192.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 4298 4870 . + . ID=gene-AAX15_00610;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AAX15_00610 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 4298 4870 . + 0 ID=cds-KKZ57193.1;Parent=gene-AAX15_00610;Dbxref=NCBI_GP:KKZ57193.1;Name=KKZ57193.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGD0.1;locus_tag=AAX15_00610;product=Holliday junction resolvase;protein_id=KKZ57193.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 4933 5547 . + . ID=gene-AAX15_00615;Name=AAX15_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00615 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 4933 5547 . + 0 ID=cds-KKZ57194.1;Parent=gene-AAX15_00615;Dbxref=NCBI_GP:KKZ57194.1;Name=KKZ57194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAH7.1;locus_tag=AAX15_00615;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=KKZ57194.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 5555 6562 . + . ID=gene-AAX15_00620;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AAX15_00620 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 5555 6562 . + 0 ID=cds-KKZ57195.1;Parent=gene-AAX15_00620;Dbxref=NCBI_GP:KKZ57195.1;Name=KKZ57195.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701568.1;locus_tag=AAX15_00620;product=ATP-dependent DNA helicase RuvB;protein_id=KKZ57195.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 6614 6898 . - . ID=gene-AAX15_00625;Name=AAX15_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00625 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 6614 6898 . - 0 ID=cds-KKZ57196.1;Parent=gene-AAX15_00625;Dbxref=NCBI_GP:KKZ57196.1;Name=KKZ57196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630076.1;locus_tag=AAX15_00625;product=hypothetical protein;protein_id=KKZ57196.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 7351 8916 . + . ID=gene-AAX15_00630;Name=AAX15_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00630 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 7351 8916 . + 0 ID=cds-KKZ57197.1;Parent=gene-AAX15_00630;Dbxref=NCBI_GP:KKZ57197.1;Name=KKZ57197.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766713.1;locus_tag=AAX15_00630;product=cytochrome d terminal oxidase subunit 1;protein_id=KKZ57197.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 8931 10067 . + . ID=gene-AAX15_00635;Name=AAX15_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00635 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 8931 10067 . + 0 ID=cds-KKZ57198.1;Parent=gene-AAX15_00635;Dbxref=NCBI_GP:KKZ57198.1;Name=KKZ57198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272373.1;locus_tag=AAX15_00635;product=cytochrome d ubiquinol oxidase subunit 2;protein_id=KKZ57198.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 10178 10465 . + . ID=gene-AAX15_00640;Name=AAX15_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00640 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 10178 10465 . + 0 ID=cds-KKZ57199.1;Parent=gene-AAX15_00640;Dbxref=NCBI_GP:KKZ57199.1;Name=KKZ57199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641612.1;locus_tag=AAX15_00640;product=cytochrome bd biosynthesis protein;protein_id=KKZ57199.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 10550 10960 . + . ID=gene-AAX15_00645;Name=AAX15_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00645 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 10550 10960 . + 0 ID=cds-KKZ57200.1;Parent=gene-AAX15_00645;Dbxref=NCBI_GP:KKZ57200.1;Name=KKZ57200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645191.1;locus_tag=AAX15_00645;product=hypothetical protein;protein_id=KKZ57200.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 10978 11664 . + . ID=gene-AAX15_00650;Name=AAX15_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00650 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 10978 11664 . + 0 ID=cds-KKZ57201.1;Parent=gene-AAX15_00650;Dbxref=NCBI_GP:KKZ57201.1;Name=KKZ57201.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355293.1;locus_tag=AAX15_00650;product=colicin uptake protein TolQ;protein_id=KKZ57201.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 11729 12148 . + . ID=gene-AAX15_00655;Name=AAX15_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00655 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 11729 12148 . + 0 ID=cds-KKZ57202.1;Parent=gene-AAX15_00655;Dbxref=NCBI_GP:KKZ57202.1;Name=KKZ57202.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43769.1;locus_tag=AAX15_00655;product=colicin uptake protein TolR;protein_id=KKZ57202.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 12163 13344 . + . ID=gene-AAX15_00660;Name=AAX15_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00660 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 12163 13344 . + 0 ID=cds-KKZ57203.1;Parent=gene-AAX15_00660;Dbxref=NCBI_GP:KKZ57203.1;Name=KKZ57203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766716.1;locus_tag=AAX15_00660;product=cell envelope biogenesis protein TolA;protein_id=KKZ57203.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 13386 14669 . + . ID=gene-AAX15_00665;Name=AAX15_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00665 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 13386 14669 . + 0 ID=cds-KKZ57204.1;Parent=gene-AAX15_00665;Dbxref=NCBI_GP:KKZ57204.1;Name=KKZ57204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626967.1;locus_tag=AAX15_00665;product=translocation protein TolB;protein_id=KKZ57204.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 14694 15155 . + . ID=gene-AAX15_00670;Name=AAX15_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00670 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 14694 15155 . + 0 ID=cds-KKZ57205.1;Parent=gene-AAX15_00670;Dbxref=NCBI_GP:KKZ57205.1;Name=KKZ57205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641602.1;locus_tag=AAX15_00670;product=membrane protein;protein_id=KKZ57205.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 15311 15386 . + . ID=gene-AAX15_00675;Name=AAX15_00675;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_00675 GCA_001008275.1|LCTH01000006.1 tRNAscan-SE tRNA 15311 15386 . + . ID=rna-AAX15_00675;Parent=gene-AAX15_00675;anticodon=(pos:15344..15346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00675;product=tRNA-Lys GCA_001008275.1|LCTH01000006.1 tRNAscan-SE exon 15311 15386 . + . ID=exon-AAX15_00675-1;Parent=rna-AAX15_00675;anticodon=(pos:15344..15346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00675;product=tRNA-Lys GCA_001008275.1|LCTH01000006.1 Genbank gene 15410 15485 . + . ID=gene-AAX15_00680;Name=AAX15_00680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_00680 GCA_001008275.1|LCTH01000006.1 tRNAscan-SE tRNA 15410 15485 . + . ID=rna-AAX15_00680;Parent=gene-AAX15_00680;anticodon=(pos:15443..15445);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00680;product=tRNA-Lys GCA_001008275.1|LCTH01000006.1 tRNAscan-SE exon 15410 15485 . + . ID=exon-AAX15_00680-1;Parent=rna-AAX15_00680;anticodon=(pos:15443..15445);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00680;product=tRNA-Lys GCA_001008275.1|LCTH01000006.1 Genbank gene 15602 16321 . + . ID=gene-AAX15_00685;Name=AAX15_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00685 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 15602 16321 . + 0 ID=cds-KKZ57206.1;Parent=gene-AAX15_00685;Dbxref=NCBI_GP:KKZ57206.1;Name=KKZ57206.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645266.1;locus_tag=AAX15_00685;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase;protein_id=KKZ57206.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 16378 16833 . + . ID=gene-AAX15_00690;Name=AAX15_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00690 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 16378 16833 . + 0 ID=cds-KKZ57207.1;Parent=gene-AAX15_00690;Dbxref=NCBI_GP:KKZ57207.1;Name=KKZ57207.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645205.1;locus_tag=AAX15_00690;product=transcriptional regulator;protein_id=KKZ57207.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 16905 18119 . + . ID=gene-AAX15_00695;Name=AAX15_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00695 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 16905 18119 . + 0 ID=cds-KKZ57208.1;Parent=gene-AAX15_00695;Dbxref=NCBI_GP:KKZ57208.1;Name=KKZ57208.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355286.1;locus_tag=AAX15_00695;product=cysteine desulfurase;protein_id=KKZ57208.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 18177 18560 . + . ID=gene-AAX15_00700;Name=AAX15_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00700 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 18177 18560 . + 0 ID=cds-KKZ57209.1;Parent=gene-AAX15_00700;Dbxref=NCBI_GP:KKZ57209.1;Name=KKZ57209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626962.1;locus_tag=AAX15_00700;product=scaffolding protein;protein_id=KKZ57209.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 18614 18937 . + . ID=gene-AAX15_00705;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AAX15_00705 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 18614 18937 . + 0 ID=cds-KKZ57210.1;Parent=gene-AAX15_00705;Dbxref=NCBI_GP:KKZ57210.1;Name=KKZ57210.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355284.1;locus_tag=AAX15_00705;product=iron-sulfur cluster assembly protein;protein_id=KKZ57210.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 18950 19471 . + . ID=gene-AAX15_00710;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AAX15_00710 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 18950 19471 . + 0 ID=cds-KKZ57211.1;Parent=gene-AAX15_00710;Dbxref=NCBI_GP:KKZ57211.1;Name=KKZ57211.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630095.1;locus_tag=AAX15_00710;product=co-chaperone HscB;protein_id=KKZ57211.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 19502 20188 . + . ID=gene-AAX15_00715;Name=AAX15_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00715 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 19502 20188 . + 0 ID=cds-KKZ57212.1;Parent=gene-AAX15_00715;Dbxref=NCBI_GP:KKZ57212.1;Name=KKZ57212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626954.1;locus_tag=AAX15_00715;product=hypothetical protein;protein_id=KKZ57212.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 20206 22065 . + . ID=gene-AAX15_00720;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AAX15_00720 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 20206 22065 . + 0 ID=cds-KKZ57213.1;Parent=gene-AAX15_00720;Dbxref=NCBI_GP:KKZ57213.1;Name=KKZ57213.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766721.1;locus_tag=AAX15_00720;product=chaperone protein HscA;protein_id=KKZ57213.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 22106 22447 . + . ID=gene-AAX15_00725;Name=AAX15_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00725 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 22106 22447 . + 0 ID=cds-KKZ57214.1;Parent=gene-AAX15_00725;Dbxref=NCBI_GP:KKZ57214.1;Name=KKZ57214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006717450.1;locus_tag=AAX15_00725;product=2Fe-2S ferredoxin;protein_id=KKZ57214.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 22447 22641 . + . ID=gene-AAX15_00730;Name=AAX15_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00730 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 22447 22641 . + 0 ID=cds-KKZ57215.1;Parent=gene-AAX15_00730;Dbxref=NCBI_GP:KKZ57215.1;Name=KKZ57215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44668.1;locus_tag=AAX15_00730;product=hypothetical protein;protein_id=KKZ57215.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 22690 23304 . - . ID=gene-AAX15_00735;Name=AAX15_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00735 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 22690 23304 . - 0 ID=cds-KKZ57216.1;Parent=gene-AAX15_00735;Dbxref=NCBI_GP:KKZ57216.1;Name=KKZ57216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43989.1;locus_tag=AAX15_00735;product=hypothetical protein;protein_id=KKZ57216.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 23322 24593 . - . ID=gene-AAX15_00740;Name=AAX15_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00740 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 23322 24593 . - 0 ID=cds-KKZ57217.1;Parent=gene-AAX15_00740;Dbxref=NCBI_GP:KKZ57217.1;Name=KKZ57217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43823.2;locus_tag=AAX15_00740;product=histidinol dehydrogenase;protein_id=KKZ57217.1;transl_table=11 GCA_001008275.1|LCTH01000006.1 Genbank gene 24603 25709 . - . ID=gene-AAX15_00745;Name=AAX15_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00745 GCA_001008275.1|LCTH01000006.1 Protein Homology CDS 24603 25709 . - 0 ID=cds-KKZ57218.1;Parent=gene-AAX15_00745;Dbxref=NCBI_GP:KKZ57218.1;Name=KKZ57218.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666608.1;locus_tag=AAX15_00745;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=KKZ57218.1;transl_table=11 ##sequence-region LCTH01000007.1 1 46328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000007.1 Genbank region 1 46328 . + . ID=LCTH01000007.1:1..46328;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000007.1 Genbank gene 1 222 . + . ID=gene-AAX15_00750;Name=AAX15_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00750;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000007.1 GeneMarkS+ CDS 1 222 . + 0 ID=cds-KKZ57144.1;Parent=gene-AAX15_00750;Dbxref=NCBI_GP:KKZ57144.1;Name=KKZ57144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_00750;partial=true;product=hypothetical protein;protein_id=KKZ57144.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 260 2326 . + . ID=gene-AAX15_00755;Name=AAX15_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00755 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 260 2326 . + 0 ID=cds-KKZ57145.1;Parent=gene-AAX15_00755;Dbxref=NCBI_GP:KKZ57145.1;Name=KKZ57145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43822.1;locus_tag=AAX15_00755;product=glycine-tRNA synthetase subunit beta;protein_id=KKZ57145.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 2413 2489 . + . ID=gene-AAX15_00760;Name=AAX15_00760;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_00760 GCA_001008275.1|LCTH01000007.1 tRNAscan-SE tRNA 2413 2489 . + . ID=rna-AAX15_00760;Parent=gene-AAX15_00760;anticodon=(pos:2447..2449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00760;product=tRNA-Met GCA_001008275.1|LCTH01000007.1 tRNAscan-SE exon 2413 2489 . + . ID=exon-AAX15_00760-1;Parent=rna-AAX15_00760;anticodon=(pos:2447..2449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_00760;product=tRNA-Met GCA_001008275.1|LCTH01000007.1 Genbank gene 3147 5378 . + . ID=gene-AAX15_00765;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AAX15_00765 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 3147 5378 . + 0 ID=cds-KKZ57146.1;Parent=gene-AAX15_00765;Dbxref=NCBI_GP:KKZ57146.1;Name=KKZ57146.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647057.1;locus_tag=AAX15_00765;product=(p)ppGpp synthetase;protein_id=KKZ57146.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 5393 5749 . + . ID=gene-AAX15_00770;Name=AAX15_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00770 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 5393 5749 . + 0 ID=cds-KKZ57147.1;Parent=gene-AAX15_00770;Dbxref=NCBI_GP:KKZ57147.1;Name=KKZ57147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44424.1;locus_tag=AAX15_00770;product=diacylglycerol kinase;protein_id=KKZ57147.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 5832 6425 . + . ID=gene-AAX15_00775;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=AAX15_00775 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 5832 6425 . + 0 ID=cds-KKZ57148.1;Parent=gene-AAX15_00775;Dbxref=NCBI_GP:KKZ57148.1;Name=KKZ57148.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44645.1;locus_tag=AAX15_00775;product=molybdenum cofactor biosynthesis protein MogA;protein_id=KKZ57148.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 6427 6765 . + . ID=gene-AAX15_00780;Name=AAX15_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00780 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 6427 6765 . + 0 ID=cds-KKZ57149.1;Parent=gene-AAX15_00780;Dbxref=NCBI_GP:KKZ57149.1;Name=KKZ57149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635169.1;locus_tag=AAX15_00780;product=nitrogen regulatory protein P-II;protein_id=KKZ57149.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 6765 7811 . + . ID=gene-AAX15_00785;Name=AAX15_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00785 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 6765 7811 . + 0 ID=cds-KKZ57150.1;Parent=gene-AAX15_00785;Dbxref=NCBI_GP:KKZ57150.1;Name=KKZ57150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500912.1;locus_tag=AAX15_00785;product=membrane protein;protein_id=KKZ57150.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 7852 10044 . - . ID=gene-AAX15_00790;Name=AAX15_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00790 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 7852 10044 . - 0 ID=cds-KKZ57151.1;Parent=gene-AAX15_00790;Dbxref=NCBI_GP:KKZ57151.1;Name=KKZ57151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701582.1;locus_tag=AAX15_00790;product=primosomal protein N';protein_id=KKZ57151.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 10129 10869 . + . ID=gene-AAX15_00795;Name=AAX15_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00795 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 10129 10869 . + 0 ID=cds-KKZ57152.1;Parent=gene-AAX15_00795;Dbxref=NCBI_GP:KKZ57152.1;Name=KKZ57152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662679.1;locus_tag=AAX15_00795;product=tRNA (guanine-N7)-methyltransferase;protein_id=KKZ57152.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 10987 11331 . + . ID=gene-AAX15_00800;Name=AAX15_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00800 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 10987 11331 . + 0 ID=cds-KKZ57153.1;Parent=gene-AAX15_00800;Dbxref=NCBI_GP:KKZ57153.1;Name=KKZ57153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632159.1;locus_tag=AAX15_00800;product=hypothetical protein;protein_id=KKZ57153.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 11546 12076 . + . ID=gene-AAX15_00805;Name=AAX15_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00805 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 11546 12076 . + 0 ID=cds-KKZ57154.1;Parent=gene-AAX15_00805;Dbxref=NCBI_GP:KKZ57154.1;Name=KKZ57154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643042.1;locus_tag=AAX15_00805;product=ferredoxin;protein_id=KKZ57154.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 12069 12350 . + . ID=gene-AAX15_00810;Name=AAX15_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00810 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 12069 12350 . + 0 ID=cds-KKZ57155.1;Parent=gene-AAX15_00810;Dbxref=NCBI_GP:KKZ57155.1;Name=KKZ57155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643041.1;locus_tag=AAX15_00810;product=nitrate reductase;protein_id=KKZ57155.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 12507 14990 . + . ID=gene-AAX15_00815;Name=AAX15_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00815 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 12507 14990 . + 0 ID=cds-KKZ57156.1;Parent=gene-AAX15_00815;Dbxref=NCBI_GP:KKZ57156.1;Name=KKZ57156.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643039.1;locus_tag=AAX15_00815;product=nitrate reductase;protein_id=KKZ57156.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 15045 15884 . + . ID=gene-AAX15_00820;Name=AAX15_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00820 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 15045 15884 . + 0 ID=cds-KKZ57157.1;Parent=gene-AAX15_00820;Dbxref=NCBI_GP:KKZ57157.1;Name=KKZ57157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627027.1;locus_tag=AAX15_00820;product=quinol dehydrogenase;protein_id=KKZ57157.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 15884 16747 . + . ID=gene-AAX15_00825;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AAX15_00825 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 15884 16747 . + 0 ID=cds-KKZ57158.1;Parent=gene-AAX15_00825;Dbxref=NCBI_GP:KKZ57158.1;Name=KKZ57158.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627025.1;locus_tag=AAX15_00825;product=quinol dehydrogenase;protein_id=KKZ57158.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 16753 17196 . + . ID=gene-AAX15_00830;Name=AAX15_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00830 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 16753 17196 . + 0 ID=cds-KKZ57159.1;Parent=gene-AAX15_00830;Dbxref=NCBI_GP:KKZ57159.1;Name=KKZ57159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659933.1;locus_tag=AAX15_00830;product=diacylglycerol kinase;protein_id=KKZ57159.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 17211 17813 . + . ID=gene-AAX15_00835;Name=AAX15_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00835 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 17211 17813 . + 0 ID=cds-KKZ57160.1;Parent=gene-AAX15_00835;Dbxref=NCBI_GP:KKZ57160.1;Name=KKZ57160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996144.1;locus_tag=AAX15_00835;product=cytochrome C;protein_id=KKZ57160.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 17989 18777 . + . ID=gene-AAX15_00840;Name=AAX15_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00840 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 17989 18777 . + 0 ID=cds-KKZ57161.1;Parent=gene-AAX15_00840;Dbxref=NCBI_GP:KKZ57161.1;Name=KKZ57161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636512.1;locus_tag=AAX15_00840;product=hypothetical protein;protein_id=KKZ57161.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 18888 19991 . - . ID=gene-AAX15_00845;Name=AAX15_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00845 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 18888 19991 . - 0 ID=cds-KKZ57162.1;Parent=gene-AAX15_00845;Dbxref=NCBI_GP:KKZ57162.1;Name=KKZ57162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627016.1;locus_tag=AAX15_00845;product=gamma-glutamyl kinase;protein_id=KKZ57162.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 20093 20575 . + . ID=gene-AAX15_00850;Name=AAX15_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00850 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 20093 20575 . + 0 ID=cds-KKZ57163.1;Parent=gene-AAX15_00850;Dbxref=NCBI_GP:KKZ57163.1;Name=KKZ57163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635192.1;locus_tag=AAX15_00850;product=dihydrofolate reductase;protein_id=KKZ57163.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 20762 21934 . + . ID=gene-AAX15_00855;Name=AAX15_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00855 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 20762 21934 . + 0 ID=cds-KKZ57164.1;Parent=gene-AAX15_00855;Dbxref=NCBI_GP:KKZ57164.1;Name=KKZ57164.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500923.1;locus_tag=AAX15_00855;product=multidrug transporter;protein_id=KKZ57164.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 21944 23476 . + . ID=gene-AAX15_00860;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=AAX15_00860 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 21944 23476 . + 0 ID=cds-KKZ57165.1;Parent=gene-AAX15_00860;Dbxref=NCBI_GP:KKZ57165.1;Name=KKZ57165.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632131.1;locus_tag=AAX15_00860;product=multidrug resistance protein B;protein_id=KKZ57165.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Protein Homology pseudogene 23603 25894 . + . ID=gene-AAX15_00865;Name=AAX15_00865;Note=disrupted;description=CRISPR-associated protein Cas3;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_00865;pseudo=true GCA_001008275.1|LCTH01000007.1 Genbank gene 25913 28108 . + . ID=gene-AAX15_00870;Name=AAX15_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00870 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 25913 28108 . + 0 ID=cds-KKZ57166.1;Parent=gene-AAX15_00870;Dbxref=NCBI_GP:KKZ57166.1;Name=KKZ57166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015683264.1;locus_tag=AAX15_00870;product=hypothetical protein;protein_id=KKZ57166.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 28124 29824 . + . ID=gene-AAX15_00875;Name=AAX15_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00875 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 28124 29824 . + 0 ID=cds-KKZ57167.1;Parent=gene-AAX15_00875;Dbxref=NCBI_GP:KKZ57167.1;Name=KKZ57167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017048492.1;locus_tag=AAX15_00875;product=hypothetical protein;protein_id=KKZ57167.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 29909 30583 . + . ID=gene-AAX15_00880;Name=AAX15_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00880 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 29909 30583 . + 0 ID=cds-KKZ57168.1;Parent=gene-AAX15_00880;Dbxref=NCBI_GP:KKZ57168.1;Name=KKZ57168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777778.1;locus_tag=AAX15_00880;product=CRISPR-associated protein;protein_id=KKZ57168.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 30580 32370 . + . ID=gene-AAX15_00885;Name=AAX15_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00885 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 30580 32370 . + 0 ID=cds-KKZ57169.1;Parent=gene-AAX15_00885;Dbxref=NCBI_GP:KKZ57169.1;Name=KKZ57169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520755.1;locus_tag=AAX15_00885;product=CRISPR-associated protein Csd1;protein_id=KKZ57169.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 32382 33248 . + . ID=gene-AAX15_00890;Name=AAX15_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00890 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 32382 33248 . + 0 ID=cds-KKZ57170.1;Parent=gene-AAX15_00890;Dbxref=NCBI_GP:KKZ57170.1;Name=KKZ57170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777774.1;locus_tag=AAX15_00890;product=CRISPR-associated protein Csd2;protein_id=KKZ57170.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 33264 33914 . + . ID=gene-AAX15_00895;Name=AAX15_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00895 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 33264 33914 . + 0 ID=cds-KKZ57171.1;Parent=gene-AAX15_00895;Dbxref=NCBI_GP:KKZ57171.1;Name=KKZ57171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758693.1;locus_tag=AAX15_00895;product=CRISPR-associated protein Cas4;protein_id=KKZ57171.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 33962 35188 . + . ID=gene-AAX15_00900;Name=AAX15_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00900 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 33962 35188 . + 0 ID=cds-KKZ57172.1;Parent=gene-AAX15_00900;Dbxref=NCBI_GP:KKZ57172.1;Name=KKZ57172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012534701.1;locus_tag=AAX15_00900;product=hypothetical protein;protein_id=KKZ57172.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Protein Homology pseudogene 35253 36262 . + . ID=gene-AAX15_00905;Name=AAX15_00905;Note=disrupted;description=CRISPR-associated protein Cas1;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_00905;pseudo=true GCA_001008275.1|LCTH01000007.1 Genbank gene 37023 39041 . - . ID=gene-AAX15_00910;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AAX15_00910 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 37023 39041 . - 0 ID=cds-KKZ57173.1;Parent=gene-AAX15_00910;Dbxref=NCBI_GP:KKZ57173.1;Name=KKZ57173.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500101.1;locus_tag=AAX15_00910;product=NAD-dependent DNA ligase LigA;protein_id=KKZ57173.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 39152 40138 . - . ID=gene-AAX15_00915;Name=AAX15_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00915 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 39152 40138 . - 0 ID=cds-KKZ57174.1;Parent=gene-AAX15_00915;Dbxref=NCBI_GP:KKZ57174.1;Name=KKZ57174.1;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631145.1;locus_tag=AAX15_00915;product=cell division protein ZipA;protein_id=KKZ57174.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 40291 41109 . + . ID=gene-AAX15_00920;Name=AAX15_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00920 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 40291 41109 . + 0 ID=cds-KKZ57175.1;Parent=gene-AAX15_00920;Dbxref=NCBI_GP:KKZ57175.1;Name=KKZ57175.1;Note=role in sulfur assimilation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLI8.1;locus_tag=AAX15_00920;product=sulfate transport protein CysZ;protein_id=KKZ57175.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 41209 42159 . + . ID=gene-AAX15_00925;Name=AAX15_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00925 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 41209 42159 . + 0 ID=cds-KKZ57176.1;Parent=gene-AAX15_00925;Dbxref=NCBI_GP:KKZ57176.1;Name=KKZ57176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054499.1;locus_tag=AAX15_00925;product=cysteine synthase;protein_id=KKZ57176.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Protein Homology pseudogene 42300 42955 . - . ID=gene-AAX15_00930;Name=AAX15_00930;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_00930;pseudo=true GCA_001008275.1|LCTH01000007.1 Genbank gene 43145 44983 . - . ID=gene-AAX15_00935;Name=AAX15_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00935 GCA_001008275.1|LCTH01000007.1 Protein Homology CDS 43145 44983 . - 0 ID=cds-KKZ57177.1;Parent=gene-AAX15_00935;Dbxref=NCBI_GP:KKZ57177.1;Name=KKZ57177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001949109.1;locus_tag=AAX15_00935;product=hypothetical protein;protein_id=KKZ57177.1;transl_table=11 GCA_001008275.1|LCTH01000007.1 Genbank gene 44976 46328 . - . ID=gene-AAX15_00940;Name=AAX15_00940;end_range=46328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00940;partial=true GCA_001008275.1|LCTH01000007.1 GeneMarkS+ CDS 44976 46328 . - 0 ID=cds-KKZ57178.1;Parent=gene-AAX15_00940;Dbxref=NCBI_GP:KKZ57178.1;Name=KKZ57178.1;end_range=46328,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_00940;partial=true;product=hypothetical protein;protein_id=KKZ57178.1;transl_table=11 ##sequence-region LCTH01000008.1 1 79040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000008.1 Genbank region 1 79040 . + . ID=LCTH01000008.1:1..79040;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000008.1 Genbank gene 1 171 . + . ID=gene-AAX15_00945;Name=AAX15_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00945;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 1 171 . + 0 ID=cds-KKZ57024.1;Parent=gene-AAX15_00945;Dbxref=NCBI_GP:KKZ57024.1;Name=KKZ57024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44371.4;locus_tag=AAX15_00945;partial=true;product=30S ribosomal protein S2;protein_id=KKZ57024.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 306 1157 . + . ID=gene-AAX15_00950;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AAX15_00950 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 306 1157 . + 0 ID=cds-KKZ57025.1;Parent=gene-AAX15_00950;Dbxref=NCBI_GP:KKZ57025.1;Name=KKZ57025.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524524.1;locus_tag=AAX15_00950;product=elongation factor Ts;protein_id=KKZ57025.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 1333 2358 . - . ID=gene-AAX15_00955;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AAX15_00955 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 1333 2358 . - 0 ID=cds-KKZ57026.1;Parent=gene-AAX15_00955;Dbxref=NCBI_GP:KKZ57026.1;Name=KKZ57026.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499730.1;locus_tag=AAX15_00955;product=UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase;protein_id=KKZ57026.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 2371 2979 . - . ID=gene-AAX15_00960;Name=AAX15_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00960 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 2371 2979 . - 0 ID=cds-KKZ57027.1;Parent=gene-AAX15_00960;Dbxref=NCBI_GP:KKZ57027.1;Name=KKZ57027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631239.1;locus_tag=AAX15_00960;product=membrane protein;protein_id=KKZ57027.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 3092 5458 . - . ID=gene-AAX15_00965;Name=AAX15_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00965 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 3092 5458 . - 0 ID=cds-KKZ57028.1;Parent=gene-AAX15_00965;Dbxref=NCBI_GP:KKZ57028.1;Name=KKZ57028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637292.1;locus_tag=AAX15_00965;product=peptidase;protein_id=KKZ57028.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 5478 6809 . - . ID=gene-AAX15_00970;Name=AAX15_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00970 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 5478 6809 . - 0 ID=cds-KKZ57029.1;Parent=gene-AAX15_00970;Dbxref=NCBI_GP:KKZ57029.1;Name=KKZ57029.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055296.1;locus_tag=AAX15_00970;product=zinc metallopeptidase RseP;protein_id=KKZ57029.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 6819 7685 . - . ID=gene-AAX15_00975;Name=AAX15_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00975 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 6819 7685 . - 0 ID=cds-KKZ57030.1;Parent=gene-AAX15_00975;Dbxref=NCBI_GP:KKZ57030.1;Name=KKZ57030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663617.1;locus_tag=AAX15_00975;product=phosphatidate cytidylyltransferase;protein_id=KKZ57030.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 7707 8426 . - . ID=gene-AAX15_00980;Name=AAX15_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00980 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 7707 8426 . - 0 ID=cds-KKZ57031.1;Parent=gene-AAX15_00980;Dbxref=NCBI_GP:KKZ57031.1;Name=KKZ57031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064838.1;locus_tag=AAX15_00980;product=UDP pyrophosphate synthase;protein_id=KKZ57031.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 8579 8866 . + . ID=gene-AAX15_00985;Name=AAX15_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00985 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 8579 8866 . + 0 ID=cds-KKZ57032.1;Parent=gene-AAX15_00985;Dbxref=NCBI_GP:KKZ57032.1;Name=KKZ57032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627500.1;locus_tag=AAX15_00985;product=hypothetical protein;protein_id=KKZ57032.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 8995 11580 . + . ID=gene-AAX15_00990;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AAX15_00990 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 8995 11580 . + 0 ID=cds-KKZ57033.1;Parent=gene-AAX15_00990;Dbxref=NCBI_GP:KKZ57033.1;Name=KKZ57033.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLY8.1;locus_tag=AAX15_00990;product=leucine--tRNA ligase;protein_id=KKZ57033.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 11676 12179 . + . ID=gene-AAX15_00995;Name=AAX15_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_00995 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 11676 12179 . + 0 ID=cds-KKZ57034.1;Parent=gene-AAX15_00995;Dbxref=NCBI_GP:KKZ57034.1;Name=KKZ57034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627491.1;locus_tag=AAX15_00995;product=hypothetical protein;protein_id=KKZ57034.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 12179 13213 . + . ID=gene-AAX15_01000;Name=AAX15_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01000 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 12179 13213 . + 0 ID=cds-KKZ57035.1;Parent=gene-AAX15_01000;Dbxref=NCBI_GP:KKZ57035.1;Name=KKZ57035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43747.1;locus_tag=AAX15_01000;product=DNA polymerase III subunit delta;protein_id=KKZ57035.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 13303 13566 . + . ID=gene-AAX15_01005;Name=AAX15_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01005 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 13303 13566 . + 0 ID=cds-KKZ57036.1;Parent=gene-AAX15_01005;Dbxref=NCBI_GP:KKZ57036.1;Name=KKZ57036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640151.1;locus_tag=AAX15_01005;product=TonB-dependent receptor;protein_id=KKZ57036.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 13615 14028 . - . ID=gene-AAX15_01010;Name=AAX15_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01010 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 13615 14028 . - 0 ID=cds-KKZ57037.1;Parent=gene-AAX15_01010;Dbxref=NCBI_GP:KKZ57037.1;Name=KKZ57037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648100.1;locus_tag=AAX15_01010;product=8-oxo-dGTP diphosphatase;protein_id=KKZ57037.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 14093 16798 . - . ID=gene-AAX15_01015;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=AAX15_01015 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 14093 16798 . - 0 ID=cds-KKZ57038.1;Parent=gene-AAX15_01015;Dbxref=NCBI_GP:KKZ57038.1;Name=KKZ57038.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631216.1;locus_tag=AAX15_01015;product=preprotein translocase subunit SecA;protein_id=KKZ57038.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 16923 17225 . - . ID=gene-AAX15_01020;Name=AAX15_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01020 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 16923 17225 . - 0 ID=cds-KKZ57039.1;Parent=gene-AAX15_01020;Dbxref=NCBI_GP:KKZ57039.1;Name=KKZ57039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637265.1;locus_tag=AAX15_01020;product=hypothetical protein;protein_id=KKZ57039.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 17304 17618 . + . ID=gene-AAX15_01025;Name=AAX15_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01025 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 17304 17618 . + 0 ID=cds-KKZ57040.1;Parent=gene-AAX15_01025;Dbxref=NCBI_GP:KKZ57040.1;Name=KKZ57040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645632.1;locus_tag=AAX15_01025;product=hypothetical protein;protein_id=KKZ57040.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 17652 18167 . - . ID=gene-AAX15_01030;Name=AAX15_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01030 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 17652 18167 . - 0 ID=cds-KKZ57041.1;Parent=gene-AAX15_01030;Dbxref=NCBI_GP:KKZ57041.1;Name=KKZ57041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640142.1;locus_tag=AAX15_01030;product=tRNA-specific adenosine deaminase;protein_id=KKZ57041.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 18167 19018 . - . ID=gene-AAX15_01035;Name=AAX15_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01035 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 18167 19018 . - 0 ID=cds-KKZ57042.1;Parent=gene-AAX15_01035;Dbxref=NCBI_GP:KKZ57042.1;Name=KKZ57042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758568.1;locus_tag=AAX15_01035;product=thymidylate synthase;protein_id=KKZ57042.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 19029 19835 . - . ID=gene-AAX15_01040;Name=AAX15_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01040 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 19029 19835 . - 0 ID=cds-KKZ57043.1;Parent=gene-AAX15_01040;Dbxref=NCBI_GP:KKZ57043.1;Name=KKZ57043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44930.1;locus_tag=AAX15_01040;product=diacylglyceryl transferase;protein_id=KKZ57043.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 19844 20641 . - . ID=gene-AAX15_01045;Name=AAX15_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01045 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 19844 20641 . - 0 ID=cds-KKZ57044.1;Parent=gene-AAX15_01045;Dbxref=NCBI_GP:KKZ57044.1;Name=KKZ57044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627469.1;locus_tag=AAX15_01045;product=hypothetical protein;protein_id=KKZ57044.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 20641 21231 . - . ID=gene-AAX15_01050;Name=AAX15_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01050 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 20641 21231 . - 0 ID=cds-KKZ57045.1;Parent=gene-AAX15_01050;Dbxref=NCBI_GP:KKZ57045.1;Name=KKZ57045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640133.1;locus_tag=AAX15_01050;product=RNA pyrophosphohydrolase;protein_id=KKZ57045.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 21756 22310 . - . ID=gene-AAX15_01055;Name=AAX15_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01055 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 21756 22310 . - 0 ID=cds-KKZ57046.1;Parent=gene-AAX15_01055;Dbxref=NCBI_GP:KKZ57046.1;Name=KKZ57046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645711.1;locus_tag=AAX15_01055;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=KKZ57046.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 22425 22865 . + . ID=gene-AAX15_01060;Name=AAX15_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01060 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 22425 22865 . + 0 ID=cds-KKZ57047.1;Parent=gene-AAX15_01060;Dbxref=NCBI_GP:KKZ57047.1;Name=KKZ57047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645818.1;locus_tag=AAX15_01060;product=prepilin peptidase;protein_id=KKZ57047.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 22862 24256 . + . ID=gene-AAX15_01065;Name=AAX15_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01065 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 22862 24256 . + 0 ID=cds-KKZ57048.1;Parent=gene-AAX15_01065;Dbxref=NCBI_GP:KKZ57048.1;Name=KKZ57048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640124.1;locus_tag=AAX15_01065;product=protein transporter HofB;protein_id=KKZ57048.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 24253 25473 . + . ID=gene-AAX15_01070;Name=AAX15_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01070 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 24253 25473 . + 0 ID=cds-KKZ57049.1;Parent=gene-AAX15_01070;Dbxref=NCBI_GP:KKZ57049.1;Name=KKZ57049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271971.1;locus_tag=AAX15_01070;product=type II secretion system protein F;protein_id=KKZ57049.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 25470 26162 . + . ID=gene-AAX15_01075;Name=AAX15_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01075 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 25470 26162 . + 0 ID=cds-KKZ57050.1;Parent=gene-AAX15_01075;Dbxref=NCBI_GP:KKZ57050.1;Name=KKZ57050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701558.1;locus_tag=AAX15_01075;product=peptidase A24;protein_id=KKZ57050.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 26216 27478 . - . ID=gene-AAX15_01080;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AAX15_01080 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 26216 27478 . - 0 ID=cds-KKZ57051.1;Parent=gene-AAX15_01080;Dbxref=NCBI_GP:KKZ57051.1;Name=KKZ57051.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668956.1;locus_tag=AAX15_01080;product=transcription termination factor Rho;protein_id=KKZ57051.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 27726 28043 . + . ID=gene-AAX15_01085;Name=AAX15_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01085 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 27726 28043 . + 0 ID=cds-KKZ57052.1;Parent=gene-AAX15_01085;Dbxref=NCBI_GP:KKZ57052.1;Name=KKZ57052.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44618.2;locus_tag=AAX15_01085;product=transcriptional repressor protein MetJ;protein_id=KKZ57052.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 28057 28443 . - . ID=gene-AAX15_01090;Name=AAX15_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01090 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 28057 28443 . - 0 ID=cds-KKZ57053.1;Parent=gene-AAX15_01090;Dbxref=NCBI_GP:KKZ57053.1;Name=KKZ57053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44617.1;locus_tag=AAX15_01090;product=transcriptional regulator;protein_id=KKZ57053.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 28520 28726 . + . ID=gene-AAX15_01095;Name=AAX15_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01095 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 28520 28726 . + 0 ID=cds-KKZ57054.1;Parent=gene-AAX15_01095;Dbxref=NCBI_GP:KKZ57054.1;Name=KKZ57054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640109.1;locus_tag=AAX15_01095;product=hypothetical protein;protein_id=KKZ57054.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 28701 30872 . + . ID=gene-AAX15_01100;Name=AAX15_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01100 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 28701 30872 . + 0 ID=cds-KKZ57055.1;Parent=gene-AAX15_01100;Dbxref=NCBI_GP:KKZ57055.1;Name=KKZ57055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629541.1;locus_tag=AAX15_01100;product=metal ABC transporter ATPase;protein_id=KKZ57055.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 31095 32333 . + . ID=gene-AAX15_01105;Name=AAX15_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01105 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 31095 32333 . + 0 ID=cds-KKZ57056.1;Parent=gene-AAX15_01105;Dbxref=NCBI_GP:KKZ57056.1;Name=KKZ57056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550484.1;locus_tag=AAX15_01105;product=serine transporter;protein_id=KKZ57056.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 32369 33736 . + . ID=gene-AAX15_01110;Name=AAX15_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01110 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 32369 33736 . + 0 ID=cds-KKZ57057.1;Parent=gene-AAX15_01110;Dbxref=NCBI_GP:KKZ57057.1;Name=KKZ57057.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P71349.1;locus_tag=AAX15_01110;product=serine dehydratase;protein_id=KKZ57057.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 35058 36428 . - . ID=gene-AAX15_01115;Name=AAX15_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01115 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 35058 36428 . - 0 ID=cds-KKZ57058.1;Parent=gene-AAX15_01115;Dbxref=NCBI_GP:KKZ57058.1;Name=KKZ57058.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499791.1;locus_tag=AAX15_01115;product=glutathione reductase;protein_id=KKZ57058.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 36594 37550 . + . ID=gene-AAX15_01120;Name=AAX15_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01120 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 36594 37550 . + 0 ID=cds-KKZ57059.1;Parent=gene-AAX15_01120;Dbxref=NCBI_GP:KKZ57059.1;Name=KKZ57059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697091.1;locus_tag=AAX15_01120;product=iron ABC transporter permease;protein_id=KKZ57059.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 37543 38502 . + . ID=gene-AAX15_01125;Name=AAX15_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01125 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 37543 38502 . + 0 ID=cds-KKZ57060.1;Parent=gene-AAX15_01125;Dbxref=NCBI_GP:KKZ57060.1;Name=KKZ57060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640094.1;locus_tag=AAX15_01125;product=iron ABC transporter permease;protein_id=KKZ57060.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 38493 39260 . + . ID=gene-AAX15_01130;Name=AAX15_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01130 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 38493 39260 . + 0 ID=cds-KKZ57061.1;Parent=gene-AAX15_01130;Dbxref=NCBI_GP:KKZ57061.1;Name=KKZ57061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628364.1;locus_tag=AAX15_01130;product=iron ABC transporter ATP-binding protein;protein_id=KKZ57061.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 39491 40399 . + . ID=gene-AAX15_01135;Name=AAX15_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01135 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 39491 40399 . + 0 ID=cds-KKZ57062.1;Parent=gene-AAX15_01135;Dbxref=NCBI_GP:KKZ57062.1;Name=KKZ57062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628366.1;locus_tag=AAX15_01135;product=ABC transporter;protein_id=KKZ57062.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 40586 41083 . + . ID=gene-AAX15_01140;Name=AAX15_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01140 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 40586 41083 . + 0 ID=cds-KKZ57063.1;Parent=gene-AAX15_01140;Dbxref=NCBI_GP:KKZ57063.1;Name=KKZ57063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007242326.1;locus_tag=AAX15_01140;product=fe(3+)-pyochelin receptor;protein_id=KKZ57063.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 41161 43239 . + . ID=gene-AAX15_01145;Name=AAX15_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01145 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 41161 43239 . + 0 ID=cds-KKZ57064.1;Parent=gene-AAX15_01145;Dbxref=NCBI_GP:KKZ57064.1;Name=KKZ57064.1;Note=iron-responsive element (ireA)%3B ireA gene is located on pathogenicity island I (PAI I)%3B outer membrane protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636861.1;locus_tag=AAX15_01145;product=iron-regulated outer membrane virulence protein;protein_id=KKZ57064.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 43295 44161 . + . ID=gene-AAX15_01150;Name=AAX15_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01150 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 43295 44161 . + 0 ID=cds-KKZ57065.1;Parent=gene-AAX15_01150;Dbxref=NCBI_GP:KKZ57065.1;Name=KKZ57065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636863.1;locus_tag=AAX15_01150;product=esterase;protein_id=KKZ57065.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Protein Homology pseudogene 44167 44800 . - . ID=gene-AAX15_01155;Name=AAX15_01155;Note=disrupted;description=glutathione reductase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_01155;pseudo=true GCA_001008275.1|LCTH01000008.1 Genbank gene 44861 45460 . - . ID=gene-AAX15_01160;Name=AAX15_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01160 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 44861 45460 . - 0 ID=cds-KKZ57066.1;Parent=gene-AAX15_01160;Dbxref=NCBI_GP:KKZ57066.1;Name=KKZ57066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631370.1;locus_tag=AAX15_01160;product=hypothetical protein;protein_id=KKZ57066.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 45553 45864 . + . ID=gene-AAX15_01165;Name=AAX15_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01165 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 45553 45864 . + 0 ID=cds-KKZ57067.1;Parent=gene-AAX15_01165;Dbxref=NCBI_GP:KKZ57067.1;Name=KKZ57067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640067.1;locus_tag=AAX15_01165;product=BolA;protein_id=KKZ57067.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 46158 47501 . + . ID=gene-AAX15_01170;Name=AAX15_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01170 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 46158 47501 . + 0 ID=cds-KKZ57098.1;Parent=gene-AAX15_01170;Dbxref=NCBI_GP:KKZ57098.1;Name=KKZ57098.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640065.1;locus_tag=AAX15_01170;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=KKZ57098.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 47504 48739 . + . ID=gene-AAX15_01175;Name=AAX15_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01175 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 47504 48739 . + 0 ID=cds-KKZ57068.1;Parent=gene-AAX15_01175;Dbxref=NCBI_GP:KKZ57068.1;Name=KKZ57068.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05011.1;locus_tag=AAX15_01175;product=Na(+)-translocating NADH-quinone reductase subunit B;protein_id=KKZ57068.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 48732 49466 . + . ID=gene-AAX15_01180;Name=AAX15_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01180 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 48732 49466 . + 0 ID=cds-KKZ57069.1;Parent=gene-AAX15_01180;Dbxref=NCBI_GP:KKZ57069.1;Name=KKZ57069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629176.1;locus_tag=AAX15_01180;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=KKZ57069.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 49466 50092 . + . ID=gene-AAX15_01185;Name=AAX15_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01185 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 49466 50092 . + 0 ID=cds-KKZ57070.1;Parent=gene-AAX15_01185;Dbxref=NCBI_GP:KKZ57070.1;Name=KKZ57070.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629349.1;locus_tag=AAX15_01185;product=Na(+)-translocating NADH-quinone reductase subunit D;protein_id=KKZ57070.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 50096 50692 . + . ID=gene-AAX15_01190;Name=AAX15_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01190 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 50096 50692 . + 0 ID=cds-KKZ57071.1;Parent=gene-AAX15_01190;Dbxref=NCBI_GP:KKZ57071.1;Name=KKZ57071.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629181.1;locus_tag=AAX15_01190;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=KKZ57071.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 50705 51940 . + . ID=gene-AAX15_01195;Name=AAX15_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01195 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 50705 51940 . + 0 ID=cds-KKZ57072.1;Parent=gene-AAX15_01195;Dbxref=NCBI_GP:KKZ57072.1;Name=KKZ57072.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05012.1;locus_tag=AAX15_01195;product=Na(+)-translocating NADH-quinone reductase subunit F;protein_id=KKZ57072.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 52085 53125 . + . ID=gene-AAX15_01200;Name=AAX15_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01200 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 52085 53125 . + 0 ID=cds-KKZ57073.1;Parent=gene-AAX15_01200;Dbxref=NCBI_GP:KKZ57073.1;Name=KKZ57073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996303.1;locus_tag=AAX15_01200;product=thiamine biosynthesis protein ApbE;protein_id=KKZ57073.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 53128 53388 . + . ID=gene-AAX15_01205;Name=AAX15_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01205 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 53128 53388 . + 0 ID=cds-KKZ57074.1;Parent=gene-AAX15_01205;Dbxref=NCBI_GP:KKZ57074.1;Name=KKZ57074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653798.1;locus_tag=AAX15_01205;product=hypothetical protein;protein_id=KKZ57074.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 53400 54656 . + . ID=gene-AAX15_01210;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AAX15_01210 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 53400 54656 . + 0 ID=cds-KKZ57075.1;Parent=gene-AAX15_01210;Dbxref=NCBI_GP:KKZ57075.1;Name=KKZ57075.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631378.1;locus_tag=AAX15_01210;product=tRNA 2-thiouridylase;protein_id=KKZ57075.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 54699 55433 . - . ID=gene-AAX15_01215;Name=AAX15_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01215 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 54699 55433 . - 0 ID=cds-KKZ57076.1;Parent=gene-AAX15_01215;Dbxref=NCBI_GP:KKZ57076.1;Name=KKZ57076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44552.1;locus_tag=AAX15_01215;product=laccase;protein_id=KKZ57076.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 55435 56409 . - . ID=gene-AAX15_01220;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AAX15_01220 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 55435 56409 . - 0 ID=cds-KKZ57077.1;Parent=gene-AAX15_01220;Dbxref=NCBI_GP:KKZ57077.1;Name=KKZ57077.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550559.1;locus_tag=AAX15_01220;product=23S rRNA pseudouridylate synthase;protein_id=KKZ57077.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 56517 57305 . + . ID=gene-AAX15_01225;Name=AAX15_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01225 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 56517 57305 . + 0 ID=cds-KKZ57078.1;Parent=gene-AAX15_01225;Dbxref=NCBI_GP:KKZ57078.1;Name=KKZ57078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633364.1;locus_tag=AAX15_01225;product=outer membrane protein assembly factor BamD;protein_id=KKZ57078.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 57357 57839 . - . ID=gene-AAX15_01230;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AAX15_01230 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 57357 57839 . - 0 ID=cds-KKZ57079.1;Parent=gene-AAX15_01230;Dbxref=NCBI_GP:KKZ57079.1;Name=KKZ57079.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631385.1;locus_tag=AAX15_01230;product=SsrA-binding protein;protein_id=KKZ57079.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 58084 59049 . - . ID=gene-AAX15_01235;Name=AAX15_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01235 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 58084 59049 . - 0 ID=cds-KKZ57080.1;Parent=gene-AAX15_01235;Dbxref=NCBI_GP:KKZ57080.1;Name=KKZ57080.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499809.1;locus_tag=AAX15_01235;product=6-phosphofructokinase;protein_id=KKZ57080.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 59157 59738 . - . ID=gene-AAX15_01240;Name=AAX15_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01240 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 59157 59738 . - 0 ID=cds-KKZ57081.1;Parent=gene-AAX15_01240;Dbxref=NCBI_GP:KKZ57081.1;Name=KKZ57081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646014.1;locus_tag=AAX15_01240;product=hypothetical protein;protein_id=KKZ57081.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 59731 60507 . - . ID=gene-AAX15_01245;Name=AAX15_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01245 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 59731 60507 . - 0 ID=cds-KKZ57082.1;Parent=gene-AAX15_01245;Dbxref=NCBI_GP:KKZ57082.1;Name=KKZ57082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIC3.1;locus_tag=AAX15_01245;product=hypothetical protein;protein_id=KKZ57082.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 60560 61681 . - . ID=gene-AAX15_01250;Name=AAX15_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01250 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 60560 61681 . - 0 ID=cds-KKZ57083.1;Parent=gene-AAX15_01250;Dbxref=NCBI_GP:KKZ57083.1;Name=KKZ57083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636895.1;locus_tag=AAX15_01250;product=DNA repair protein Smf;protein_id=KKZ57083.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 62213 63760 . + . ID=gene-AAX15_01255;Name=AAX15_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01255 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 62213 63760 . + 0 ID=cds-KKZ57084.1;Parent=gene-AAX15_01255;Dbxref=NCBI_GP:KKZ57084.1;Name=KKZ57084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629360.1;locus_tag=AAX15_01255;product=2-isopropylmalate synthase;protein_id=KKZ57084.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 63924 65000 . + . ID=gene-AAX15_01260;Name=AAX15_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01260 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 63924 65000 . + 0 ID=cds-KKZ57085.1;Parent=gene-AAX15_01260;Dbxref=NCBI_GP:KKZ57085.1;Name=KKZ57085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633354.1;locus_tag=AAX15_01260;product=3-isopropylmalate dehydrogenase;protein_id=KKZ57085.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 65077 66486 . + . ID=gene-AAX15_01265;Name=AAX15_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01265 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 65077 66486 . + 0 ID=cds-KKZ57086.1;Parent=gene-AAX15_01265;Dbxref=NCBI_GP:KKZ57086.1;Name=KKZ57086.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701986.1;locus_tag=AAX15_01265;product=isopropylmalate isomerase;protein_id=KKZ57086.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 66497 67099 . + . ID=gene-AAX15_01270;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AAX15_01270 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 66497 67099 . + 0 ID=cds-KKZ57087.1;Parent=gene-AAX15_01270;Dbxref=NCBI_GP:KKZ57087.1;Name=KKZ57087.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355432.1;locus_tag=AAX15_01270;product=isopropylmalate isomerase;protein_id=KKZ57087.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 67911 69125 . - . ID=gene-AAX15_01275;Name=AAX15_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01275 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 67911 69125 . - 0 ID=cds-KKZ57088.1;Parent=gene-AAX15_01275;Dbxref=NCBI_GP:KKZ57088.1;Name=KKZ57088.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271965.1;locus_tag=AAX15_01275;product=aminotransferase;protein_id=KKZ57088.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 69079 69348 . - . ID=gene-AAX15_01280;Name=AAX15_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01280 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 69079 69348 . - 0 ID=cds-KKZ57089.1;Parent=gene-AAX15_01280;Dbxref=NCBI_GP:KKZ57089.1;Name=KKZ57089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648936.1;locus_tag=AAX15_01280;product=hypothetical protein;protein_id=KKZ57089.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 69282 70553 . + . ID=gene-AAX15_01285;Name=AAX15_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01285 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 69282 70553 . + 0 ID=cds-KKZ57090.1;Parent=gene-AAX15_01285;Dbxref=NCBI_GP:KKZ57090.1;Name=KKZ57090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666711.1;locus_tag=AAX15_01285;product=isochorismate synthase;protein_id=KKZ57090.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 70568 72274 . + . ID=gene-AAX15_01290;Name=AAX15_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01290 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 70568 72274 . + 0 ID=cds-KKZ57091.1;Parent=gene-AAX15_01290;Dbxref=NCBI_GP:KKZ57091.1;Name=KKZ57091.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656241.1;locus_tag=AAX15_01290;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=KKZ57091.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 72335 73078 . + . ID=gene-AAX15_01295;Name=AAX15_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01295 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 72335 73078 . + 0 ID=cds-KKZ57092.1;Parent=gene-AAX15_01295;Dbxref=NCBI_GP:KKZ57092.1;Name=KKZ57092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666715.1;locus_tag=AAX15_01295;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=KKZ57092.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 73134 74450 . + . ID=gene-AAX15_01300;Name=AAX15_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01300 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 73134 74450 . + 0 ID=cds-KKZ57093.1;Parent=gene-AAX15_01300;Dbxref=NCBI_GP:KKZ57093.1;Name=KKZ57093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631257.1;locus_tag=AAX15_01300;product=transporter;protein_id=KKZ57093.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 74539 74862 . + . ID=gene-AAX15_01305;Name=AAX15_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01305 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 74539 74862 . + 0 ID=cds-KKZ57094.1;Parent=gene-AAX15_01305;Dbxref=NCBI_GP:KKZ57094.1;Name=KKZ57094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631644.1;locus_tag=AAX15_01305;product=transcriptional regulator;protein_id=KKZ57094.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 75542 76321 . - . ID=gene-AAX15_01310;Name=AAX15_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01310 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 75542 76321 . - 0 ID=cds-KKZ57095.1;Parent=gene-AAX15_01310;Dbxref=NCBI_GP:KKZ57095.1;Name=KKZ57095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499734.1;locus_tag=AAX15_01310;product=deoxyribonuclease HsdR;protein_id=KKZ57095.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 76442 77698 . + . ID=gene-AAX15_01315;Name=AAX15_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01315 GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 76442 77698 . + 0 ID=cds-KKZ57096.1;Parent=gene-AAX15_01315;Dbxref=NCBI_GP:KKZ57096.1;Name=KKZ57096.1;Note=tryptophan transporter of high affinity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627526.1;locus_tag=AAX15_01315;product=tryptophan permease;protein_id=KKZ57096.1;transl_table=11 GCA_001008275.1|LCTH01000008.1 Genbank gene 77986 79040 . - . ID=gene-AAX15_01320;Name=AAX15_01320;end_range=79040,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01320;partial=true GCA_001008275.1|LCTH01000008.1 Protein Homology CDS 77986 79040 . - 2 ID=cds-KKZ57097.1;Parent=gene-AAX15_01320;Dbxref=NCBI_GP:KKZ57097.1;Name=KKZ57097.1;end_range=79040,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659267.1;locus_tag=AAX15_01320;partial=true;product=peptidase;protein_id=KKZ57097.1;transl_table=11 ##sequence-region LCTH01000009.1 1 1128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000009.1 Genbank region 1 1128 . + . ID=LCTH01000009.1:1..1128;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000009.1 Genbank gene 2 1128 . + . ID=gene-AAX15_01325;Name=tuf;end_range=1128,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AAX15_01325;partial=true GCA_001008275.1|LCTH01000009.1 Protein Homology CDS 2 1128 . + 0 ID=cds-KKZ56955.1;Parent=gene-AAX15_01325;Dbxref=NCBI_GP:KKZ56955.1;Name=KKZ56955.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=1128,.;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759586.1;locus_tag=AAX15_01325;partial=true;product=elongation factor Tu;protein_id=KKZ56955.1;transl_table=11 ##sequence-region LCTH01000010.1 1 11030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000010.1 Genbank region 1 11030 . + . ID=LCTH01000010.1:1..11030;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000010.1 Genbank gene 42 2462 . - . ID=gene-AAX15_01330;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AAX15_01330 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 42 2462 . - 0 ID=cds-KKZ56881.1;Parent=gene-AAX15_01330;Dbxref=NCBI_GP:KKZ56881.1;Name=KKZ56881.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692029.1;locus_tag=AAX15_01330;product=DNA gyrase subunit B;protein_id=KKZ56881.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 2588 4900 . - . ID=gene-AAX15_01335;Name=AAX15_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01335 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 2588 4900 . - 0 ID=cds-KKZ56882.1;Parent=gene-AAX15_01335;Dbxref=NCBI_GP:KKZ56882.1;Name=KKZ56882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499558.1;locus_tag=AAX15_01335;product=transcription accessory protein;protein_id=KKZ56882.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 5008 5484 . + . ID=gene-AAX15_01340;Name=AAX15_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01340 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 5008 5484 . + 0 ID=cds-KKZ56883.1;Parent=gene-AAX15_01340;Dbxref=NCBI_GP:KKZ56883.1;Name=KKZ56883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526392.1;locus_tag=AAX15_01340;product=transcription elongation factor GreB;protein_id=KKZ56883.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 5554 6171 . - . ID=gene-AAX15_01345;Name=AAX15_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01345 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 5554 6171 . - 0 ID=cds-KKZ56884.1;Parent=gene-AAX15_01345;Dbxref=NCBI_GP:KKZ56884.1;Name=KKZ56884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649556.1;locus_tag=AAX15_01345;product=GntR family transcriptional regulator;protein_id=KKZ56884.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 6171 7076 . - . ID=gene-AAX15_01350;Name=AAX15_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01350 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 6171 7076 . - 0 ID=cds-KKZ56885.1;Parent=gene-AAX15_01350;Dbxref=NCBI_GP:KKZ56885.1;Name=KKZ56885.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660948.1;locus_tag=AAX15_01350;product=transcriptional regulator;protein_id=KKZ56885.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 7199 7924 . + . ID=gene-AAX15_01355;Name=AAX15_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01355 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 7199 7924 . + 0 ID=cds-KKZ56886.1;Parent=gene-AAX15_01355;Dbxref=NCBI_GP:KKZ56886.1;Name=KKZ56886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692022.1;locus_tag=AAX15_01355;product=glutathione peroxidase;protein_id=KKZ56886.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 8016 8237 . - . ID=gene-AAX15_01360;Name=AAX15_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01360 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 8016 8237 . - 0 ID=cds-KKZ56887.1;Parent=gene-AAX15_01360;Dbxref=NCBI_GP:KKZ56887.1;Name=KKZ56887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44759.1;locus_tag=AAX15_01360;product=protein SlyX-like protein;protein_id=KKZ56887.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 8335 9060 . + . ID=gene-AAX15_01365;Name=AAX15_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01365 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 8335 9060 . + 0 ID=cds-KKZ56888.1;Parent=gene-AAX15_01365;Dbxref=NCBI_GP:KKZ56888.1;Name=KKZ56888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636126.1;locus_tag=AAX15_01365;product=peptidylprolyl isomerase;protein_id=KKZ56888.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 9149 9814 . + . ID=gene-AAX15_01370;Name=AAX15_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01370 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 9149 9814 . + 0 ID=cds-KKZ56889.1;Parent=gene-AAX15_01370;Dbxref=NCBI_GP:KKZ56889.1;Name=KKZ56889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692020.1;locus_tag=AAX15_01370;product=hypothetical protein;protein_id=KKZ56889.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 9814 10194 . + . ID=gene-AAX15_01375;Name=AAX15_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01375 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 9814 10194 . + 0 ID=cds-KKZ56890.1;Parent=gene-AAX15_01375;Dbxref=NCBI_GP:KKZ56890.1;Name=KKZ56890.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499553.1;locus_tag=AAX15_01375;product=sulfur transfer complex subunit TusD;protein_id=KKZ56890.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 10191 10550 . + . ID=gene-AAX15_01380;Name=AAX15_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01380 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 10191 10550 . + 0 ID=cds-KKZ56891.1;Parent=gene-AAX15_01380;Dbxref=NCBI_GP:KKZ56891.1;Name=KKZ56891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644410.1;locus_tag=AAX15_01380;product=sulfur relay protein TusC;protein_id=KKZ56891.1;transl_table=11 GCA_001008275.1|LCTH01000010.1 Genbank gene 10559 10846 . + . ID=gene-AAX15_01385;Name=AAX15_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01385 GCA_001008275.1|LCTH01000010.1 Protein Homology CDS 10559 10846 . + 0 ID=cds-KKZ56892.1;Parent=gene-AAX15_01385;Dbxref=NCBI_GP:KKZ56892.1;Name=KKZ56892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526387.1;locus_tag=AAX15_01385;product=hypothetical protein;protein_id=KKZ56892.1;transl_table=11 ##sequence-region LCTH01000011.1 1 10523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000011.1 Genbank region 1 10523 . + . ID=LCTH01000011.1:1..10523;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000011.1 Genbank gene 1 1280 . + . ID=gene-AAX15_01390;Name=AAX15_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01390;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 1 1280 . + 2 ID=cds-KKZ56827.1;Parent=gene-AAX15_01390;Dbxref=NCBI_GP:KKZ56827.1;Name=KKZ56827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628943.1;locus_tag=AAX15_01390;partial=true;product=formate dehydrogenase;protein_id=KKZ56827.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 1384 1725 . - . ID=gene-AAX15_01395;Name=AAX15_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01395 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 1384 1725 . - 0 ID=cds-KKZ56828.1;Parent=gene-AAX15_01395;Dbxref=NCBI_GP:KKZ56828.1;Name=KKZ56828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VPH7.1;locus_tag=AAX15_01395;product=hypothetical protein;protein_id=KKZ56828.1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 1820 3034 . - . ID=gene-AAX15_01400;Name=AAX15_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01400 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 1820 3034 . - 0 ID=cds-KKZ56829.1;Parent=gene-AAX15_01400;Dbxref=NCBI_GP:KKZ56829.1;Name=KKZ56829.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642009.1;locus_tag=AAX15_01400;product=sodium:glutamate symporter;protein_id=KKZ56829.1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 3059 5314 . - . ID=gene-AAX15_01405;Name=AAX15_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01405 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 3059 5314 . - 0 ID=cds-KKZ56830.1;Parent=gene-AAX15_01405;Dbxref=NCBI_GP:KKZ56830.1;Name=KKZ56830.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500580.1;locus_tag=AAX15_01405;product=DNA topoisomerase IV subunit A;protein_id=KKZ56830.1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 5382 7280 . - . ID=gene-AAX15_01410;Name=AAX15_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01410 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 5382 7280 . - 0 ID=cds-KKZ56831.1;Parent=gene-AAX15_01410;Dbxref=NCBI_GP:KKZ56831.1;Name=KKZ56831.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628935.1;locus_tag=AAX15_01410;product=DNA topoisomerase IV subunit B;protein_id=KKZ56831.1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 7352 8287 . - . ID=gene-AAX15_01415;Name=AAX15_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01415 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 7352 8287 . - 0 ID=cds-KKZ56832.1;Parent=gene-AAX15_01415;Dbxref=NCBI_GP:KKZ56832.1;Name=KKZ56832.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527712.1;locus_tag=AAX15_01415;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=KKZ56832.1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 8384 9814 . + . ID=gene-AAX15_01420;Name=AAX15_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01420 GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 8384 9814 . + 0 ID=cds-KKZ56833.1;Parent=gene-AAX15_01420;Dbxref=NCBI_GP:KKZ56833.1;Name=KKZ56833.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500577.1;locus_tag=AAX15_01420;product=heptose 1-phosphate adenyltransferase;protein_id=KKZ56833.1;transl_table=11 GCA_001008275.1|LCTH01000011.1 Genbank gene 9867 10523 . + . ID=gene-AAX15_01425;Name=AAX15_01425;end_range=10523,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01425;partial=true GCA_001008275.1|LCTH01000011.1 Protein Homology CDS 9867 10523 . + 0 ID=cds-KKZ56834.1;Parent=gene-AAX15_01425;Dbxref=NCBI_GP:KKZ56834.1;Name=KKZ56834.1;end_range=10523,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500478.1;locus_tag=AAX15_01425;partial=true;product=AraC family transcriptional regulator;protein_id=KKZ56834.1;transl_table=11 ##sequence-region LCTH01000012.1 1 4082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000012.1 Genbank region 1 4082 . + . ID=LCTH01000012.1:1..4082;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000012.1 Genbank gene 1 509 . + . ID=gene-AAX15_01430;Name=AAX15_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01430;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000012.1 GeneMarkS+ CDS 1 509 . + 2 ID=cds-KKZ56762.1;Parent=gene-AAX15_01430;Dbxref=NCBI_GP:KKZ56762.1;Name=KKZ56762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_01430;partial=true;product=hypothetical protein;protein_id=KKZ56762.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000012.1 Genbank gene 599 2068 . + . ID=gene-AAX15_01435;Name=AAX15_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01435 GCA_001008275.1|LCTH01000012.1 Protein Homology CDS 599 2068 . + 0 ID=cds-KKZ56763.1;Parent=gene-AAX15_01435;Dbxref=NCBI_GP:KKZ56763.1;Name=KKZ56763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645778.1;locus_tag=AAX15_01435;product=membrane protein;protein_id=KKZ56763.1;transl_table=11 GCA_001008275.1|LCTH01000012.1 Genbank gene 2194 4044 . + . ID=gene-AAX15_01440;Name=AAX15_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01440 GCA_001008275.1|LCTH01000012.1 Protein Homology CDS 2194 4044 . + 0 ID=cds-KKZ56764.1;Parent=gene-AAX15_01440;Dbxref=NCBI_GP:KKZ56764.1;Name=KKZ56764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626354.1;locus_tag=AAX15_01440;product=potassium transporter;protein_id=KKZ56764.1;transl_table=11 ##sequence-region LCTH01000013.1 1 11415 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000013.1 Genbank region 1 11415 . + . ID=LCTH01000013.1:1..11415;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000013.1 Genbank gene 328 1674 . - . ID=gene-AAX15_01445;Name=AAX15_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01445 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 328 1674 . - 0 ID=cds-KKZ56740.1;Parent=gene-AAX15_01445;Dbxref=NCBI_GP:KKZ56740.1;Name=KKZ56740.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43873.1;locus_tag=AAX15_01445;product=acetyl-CoA carboxylase;protein_id=KKZ56740.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 1851 2318 . - . ID=gene-AAX15_01450;Name=AAX15_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01450 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 1851 2318 . - 0 ID=cds-KKZ56741.1;Parent=gene-AAX15_01450;Dbxref=NCBI_GP:KKZ56741.1;Name=KKZ56741.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626697.1;locus_tag=AAX15_01450;product=acetyl-CoA carboxylase;protein_id=KKZ56741.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 2472 2921 . - . ID=gene-AAX15_01455;Name=AAX15_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01455 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 2472 2921 . - 0 ID=cds-KKZ56742.1;Parent=gene-AAX15_01455;Dbxref=NCBI_GP:KKZ56742.1;Name=KKZ56742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664194.1;locus_tag=AAX15_01455;product=3-dehydroquinate dehydratase;protein_id=KKZ56742.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 2978 3967 . - . ID=gene-AAX15_01460;Name=AAX15_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01460 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 2978 3967 . - 0 ID=cds-KKZ56743.1;Parent=gene-AAX15_01460;Dbxref=NCBI_GP:KKZ56743.1;Name=KKZ56743.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550990.1;locus_tag=AAX15_01460;product=O-succinylbenzoate synthase;protein_id=KKZ56743.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 4036 4893 . - . ID=gene-AAX15_01465;Name=AAX15_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01465 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 4036 4893 . - 0 ID=cds-KKZ56744.1;Parent=gene-AAX15_01465;Dbxref=NCBI_GP:KKZ56744.1;Name=KKZ56744.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44960.1;locus_tag=AAX15_01465;product=dihydroxynaphthoic acid synthetase;protein_id=KKZ56744.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 4909 5049 . - . ID=gene-AAX15_01470;Name=AAX15_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01470 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 4909 5049 . - 0 ID=cds-KKZ56751.1;Parent=gene-AAX15_01470;Dbxref=NCBI_GP:KKZ56751.1;Name=KKZ56751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44086.1;locus_tag=AAX15_01470;product=hypothetical protein;protein_id=KKZ56751.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 5063 5605 . + . ID=gene-AAX15_01475;Name=AAX15_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01475 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 5063 5605 . + 0 ID=cds-KKZ56752.1;Parent=gene-AAX15_01475;Dbxref=NCBI_GP:KKZ56752.1;Name=KKZ56752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500187.1;locus_tag=AAX15_01475;product=hypothetical protein;protein_id=KKZ56752.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 5677 5940 . - . ID=gene-AAX15_01480;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AAX15_01480 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 5677 5940 . - 0 ID=cds-KKZ56745.1;Parent=gene-AAX15_01480;Dbxref=NCBI_GP:KKZ56745.1;Name=KKZ56745.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652704.1;locus_tag=AAX15_01480;product=30S ribosomal protein S20;protein_id=KKZ56745.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 6207 7781 . + . ID=gene-AAX15_01485;Name=AAX15_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01485 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 6207 7781 . + 0 ID=cds-KKZ56746.1;Parent=gene-AAX15_01485;Dbxref=NCBI_GP:KKZ56746.1;Name=KKZ56746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686233.1;locus_tag=AAX15_01485;product=multidrug transporter MurJ;protein_id=KKZ56746.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 7828 8754 . + . ID=gene-AAX15_01490;Name=AAX15_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01490 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 7828 8754 . + 0 ID=cds-KKZ56747.1;Parent=gene-AAX15_01490;Dbxref=NCBI_GP:KKZ56747.1;Name=KKZ56747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639166.1;locus_tag=AAX15_01490;product=FMN adenylyltransferase;protein_id=KKZ56747.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 8757 8999 . + . ID=gene-AAX15_01495;Name=AAX15_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01495 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 8757 8999 . + 0 ID=cds-KKZ56748.1;Parent=gene-AAX15_01495;Dbxref=NCBI_GP:KKZ56748.1;Name=KKZ56748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639168.1;locus_tag=AAX15_01495;product=hypothetical protein;protein_id=KKZ56748.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 8983 9231 . + . ID=gene-AAX15_01500;Name=AAX15_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01500 GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 8983 9231 . + 0 ID=cds-KKZ56749.1;Parent=gene-AAX15_01500;Dbxref=NCBI_GP:KKZ56749.1;Name=KKZ56749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639170.1;locus_tag=AAX15_01500;product=hypothetical protein;protein_id=KKZ56749.1;transl_table=11 GCA_001008275.1|LCTH01000013.1 Genbank gene 9258 11415 . + . ID=gene-AAX15_01505;Name=ileS;end_range=11415,.;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AAX15_01505;partial=true GCA_001008275.1|LCTH01000013.1 Protein Homology CDS 9258 11415 . + 0 ID=cds-KKZ56750.1;Parent=gene-AAX15_01505;Dbxref=NCBI_GP:KKZ56750.1;Name=KKZ56750.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;end_range=11415,.;gbkey=CDS;gene=ileS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500184.1;locus_tag=AAX15_01505;partial=true;product=isoleucine--tRNA ligase;protein_id=KKZ56750.1;transl_table=11 ##sequence-region LCTH01000014.1 1 83611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000014.1 Genbank region 1 83611 . + . ID=LCTH01000014.1:1..83611;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000014.1 Protein Homology pseudogene 383 3361 . - . ID=gene-AAX15_01510;Name=AAX15_01510;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_01510;pseudo=true GCA_001008275.1|LCTH01000014.1 Genbank gene 3603 4682 . - . ID=gene-AAX15_01515;Name=AAX15_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01515 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 3603 4682 . - 0 ID=cds-KKZ56574.1;Parent=gene-AAX15_01515;Dbxref=NCBI_GP:KKZ56574.1;Name=KKZ56574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640009.1;locus_tag=AAX15_01515;product=DNA replication protein RecF;protein_id=KKZ56574.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 4684 5784 . - . ID=gene-AAX15_01520;Name=AAX15_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01520 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 4684 5784 . - 0 ID=cds-KKZ56575.1;Parent=gene-AAX15_01520;Dbxref=NCBI_GP:KKZ56575.1;Name=KKZ56575.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995638.1;locus_tag=AAX15_01520;product=DNA polymerase III subunit beta;protein_id=KKZ56575.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 5797 7161 . - . ID=gene-AAX15_01525;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AAX15_01525 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 5797 7161 . - 0 ID=cds-KKZ56576.1;Parent=gene-AAX15_01525;Dbxref=NCBI_GP:KKZ56576.1;Name=KKZ56576.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636911.1;locus_tag=AAX15_01525;product=chromosomal replication initiation protein;protein_id=KKZ56576.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 7355 10045 . - . ID=gene-AAX15_01530;Name=AAX15_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01530 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 7355 10045 . - 0 ID=cds-KKZ56577.1;Parent=gene-AAX15_01530;Dbxref=NCBI_GP:KKZ56577.1;Name=KKZ56577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633347.1;locus_tag=AAX15_01530;product=ligand-gated channel;protein_id=KKZ56577.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 10059 11906 . - . ID=gene-AAX15_01535;Name=AAX15_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01535 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 10059 11906 . - 0 ID=cds-KKZ56578.1;Parent=gene-AAX15_01535;Dbxref=NCBI_GP:KKZ56578.1;Name=KKZ56578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640000.1;locus_tag=AAX15_01535;product=transferrin-binding protein 2;protein_id=KKZ56578.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Protein Homology pseudogene 12004 13450 . + . ID=gene-AAX15_01540;Name=AAX15_01540;Note=disrupted;description=chromosomal replication initiation protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_01540;pseudo=true GCA_001008275.1|LCTH01000014.1 Genbank gene 13632 13766 . + . ID=gene-AAX15_01545;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AAX15_01545 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 13632 13766 . + 0 ID=cds-KKZ56579.1;Parent=gene-AAX15_01545;Dbxref=NCBI_GP:KKZ56579.1;Name=KKZ56579.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;inference=EXISTENCE: similar to AA sequence:SwissProt:P66245.1;locus_tag=AAX15_01545;product=50S ribosomal protein L34;protein_id=KKZ56579.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 13779 14138 . + . ID=gene-AAX15_01550;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AAX15_01550 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 13779 14138 . + 0 ID=cds-KKZ56580.1;Parent=gene-AAX15_01550;Dbxref=NCBI_GP:KKZ56580.1;Name=KKZ56580.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690837.1;locus_tag=AAX15_01550;product=ribonuclease P;protein_id=KKZ56580.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 14102 14362 . + . ID=gene-AAX15_01555;Name=AAX15_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01555 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 14102 14362 . + 0 ID=cds-KKZ56581.1;Parent=gene-AAX15_01555;Dbxref=NCBI_GP:KKZ56581.1;Name=KKZ56581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627402.1;locus_tag=AAX15_01555;product=membrane protein;protein_id=KKZ56581.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 14362 15990 . + . ID=gene-AAX15_01560;Name=AAX15_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01560 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 14362 15990 . + 0 ID=cds-KKZ56582.1;Parent=gene-AAX15_01560;Dbxref=NCBI_GP:KKZ56582.1;Name=KKZ56582.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645856.1;locus_tag=AAX15_01560;product=membrane protein insertase;protein_id=KKZ56582.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 16149 17507 . + . ID=gene-AAX15_01565;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=AAX15_01565 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 16149 17507 . + 0 ID=cds-KKZ56583.1;Parent=gene-AAX15_01565;Dbxref=NCBI_GP:KKZ56583.1;Name=KKZ56583.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527255.1;locus_tag=AAX15_01565;product=tRNA modification GTPase TrmE;protein_id=KKZ56583.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 17518 18084 . + . ID=gene-AAX15_01570;Name=AAX15_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01570 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 17518 18084 . + 0 ID=cds-KKZ56584.1;Parent=gene-AAX15_01570;Dbxref=NCBI_GP:KKZ56584.1;Name=KKZ56584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636917.1;locus_tag=AAX15_01570;product=membrane protein;protein_id=KKZ56584.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 18151 20019 . + . ID=gene-AAX15_01575;Name=AAX15_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01575 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 18151 20019 . + 0 ID=cds-KKZ56585.1;Parent=gene-AAX15_01575;Dbxref=NCBI_GP:KKZ56585.1;Name=KKZ56585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645913.1;locus_tag=AAX15_01575;product=peptidylprolyl isomerase;protein_id=KKZ56585.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 20098 20448 . + . ID=gene-AAX15_01580;Name=AAX15_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01580 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 20098 20448 . + 0 ID=cds-KKZ56586.1;Parent=gene-AAX15_01580;Dbxref=NCBI_GP:KKZ56586.1;Name=KKZ56586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655947.1;locus_tag=AAX15_01580;product=purine nucleoside phosphoramidase;protein_id=KKZ56586.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 20448 20798 . + . ID=gene-AAX15_01585;Name=AAX15_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01585 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 20448 20798 . + 0 ID=cds-KKZ56587.1;Parent=gene-AAX15_01585;Dbxref=NCBI_GP:KKZ56587.1;Name=KKZ56587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627387.1;locus_tag=AAX15_01585;product=hypothetical protein;protein_id=KKZ56587.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 20802 21854 . + . ID=gene-AAX15_01590;Name=AAX15_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01590 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 20802 21854 . + 0 ID=cds-KKZ56588.1;Parent=gene-AAX15_01590;Dbxref=NCBI_GP:KKZ56588.1;Name=KKZ56588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627385.1;locus_tag=AAX15_01590;product=beta-hexosaminidase;protein_id=KKZ56588.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 21851 23029 . + . ID=gene-AAX15_01595;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=AAX15_01595 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 21851 23029 . + 0 ID=cds-KKZ56589.1;Parent=gene-AAX15_01595;Dbxref=NCBI_GP:KKZ56589.1;Name=KKZ56589.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499829.1;locus_tag=AAX15_01595;product=23S rRNA methyltransferase;protein_id=KKZ56589.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 23396 24073 . - . ID=gene-AAX15_01600;Name=AAX15_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01600 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 23396 24073 . - 0 ID=cds-KKZ56590.1;Parent=gene-AAX15_01600;Dbxref=NCBI_GP:KKZ56590.1;Name=KKZ56590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631425.1;locus_tag=AAX15_01600;product=cyclic AMP receptor protein;protein_id=KKZ56590.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 24058 24309 . - . ID=gene-AAX15_01605;Name=AAX15_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01605 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 24058 24309 . - 0 ID=cds-KKZ56591.1;Parent=gene-AAX15_01605;Dbxref=NCBI_GP:KKZ56591.1;Name=KKZ56591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633331.1;locus_tag=AAX15_01605;product=hypothetical protein;protein_id=KKZ56591.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 24331 24987 . - . ID=gene-AAX15_01610;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=AAX15_01610 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 24331 24987 . - 0 ID=cds-KKZ56592.1;Parent=gene-AAX15_01610;Dbxref=NCBI_GP:KKZ56592.1;Name=KKZ56592.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636931.1;locus_tag=AAX15_01610;product=division inhibitor protein;protein_id=KKZ56592.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 24991 25446 . - . ID=gene-AAX15_01615;Name=AAX15_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01615 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 24991 25446 . - 0 ID=cds-KKZ56593.1;Parent=gene-AAX15_01615;Dbxref=NCBI_GP:KKZ56593.1;Name=KKZ56593.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550997.1;locus_tag=AAX15_01615;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=KKZ56593.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 25494 26696 . - . ID=gene-AAX15_01620;Name=AAX15_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01620 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 25494 26696 . - 0 ID=cds-KKZ56594.1;Parent=gene-AAX15_01620;Dbxref=NCBI_GP:KKZ56594.1;Name=KKZ56594.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633320.1;locus_tag=AAX15_01620;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=KKZ56594.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 26860 27525 . + . ID=gene-AAX15_01625;Name=AAX15_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01625 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 26860 27525 . + 0 ID=cds-KKZ56595.1;Parent=gene-AAX15_01625;Dbxref=NCBI_GP:KKZ56595.1;Name=KKZ56595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627369.1;locus_tag=AAX15_01625;product=hypothetical protein;protein_id=KKZ56595.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 27739 27975 . + . ID=gene-AAX15_01630;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AAX15_01630 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 27739 27975 . + 0 ID=cds-KKZ56596.1;Parent=gene-AAX15_01630;Dbxref=NCBI_GP:KKZ56596.1;Name=KKZ56596.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018347033.1;locus_tag=AAX15_01630;product=50S ribosomal protein L28;protein_id=KKZ56596.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 27987 28157 . + . ID=gene-AAX15_01635;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AAX15_01635 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 27987 28157 . + 0 ID=cds-KKZ56597.1;Parent=gene-AAX15_01635;Dbxref=NCBI_GP:KKZ56597.1;Name=KKZ56597.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:SwissProt:B8F859.1;locus_tag=AAX15_01635;product=50S ribosomal protein L33;protein_id=KKZ56597.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 28229 29044 . + . ID=gene-AAX15_01640;Name=AAX15_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01640 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 28229 29044 . + 0 ID=cds-KKZ56598.1;Parent=gene-AAX15_01640;Dbxref=NCBI_GP:KKZ56598.1;Name=KKZ56598.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627367.1;locus_tag=AAX15_01640;product=formamidopyrimidine-DNA glycosylase;protein_id=KKZ56598.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 29106 30128 . - . ID=gene-AAX15_01645;Name=AAX15_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01645 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 29106 30128 . - 0 ID=cds-KKZ56599.1;Parent=gene-AAX15_01645;Dbxref=NCBI_GP:KKZ56599.1;Name=KKZ56599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651554.1;locus_tag=AAX15_01645;product=peptidase;protein_id=KKZ56599.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 30129 31247 . - . ID=gene-AAX15_01650;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AAX15_01650 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 30129 31247 . - 0 ID=cds-KKZ56600.1;Parent=gene-AAX15_01650;Dbxref=NCBI_GP:KKZ56600.1;Name=KKZ56600.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499847.1;locus_tag=AAX15_01650;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=KKZ56600.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 31250 31699 . - . ID=gene-AAX15_01655;Name=AAX15_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01655 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 31250 31699 . - 0 ID=cds-KKZ56601.1;Parent=gene-AAX15_01655;Dbxref=NCBI_GP:KKZ56601.1;Name=KKZ56601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627362.1;locus_tag=AAX15_01655;product=NrdR family transcriptional regulator;protein_id=KKZ56601.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 31783 35136 . - . ID=gene-AAX15_01660;Name=AAX15_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01660 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 31783 35136 . - 0 ID=cds-KKZ56646.1;Parent=gene-AAX15_01660;Dbxref=NCBI_GP:KKZ56646.1;Name=KKZ56646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636942.1;locus_tag=AAX15_01660;product=exodeoxyribonuclease V subunit gamma;protein_id=KKZ56646.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 35183 35470 . - . ID=gene-AAX15_01665;Name=AAX15_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01665 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 35183 35470 . - 0 ID=cds-KKZ56647.1;Parent=gene-AAX15_01665;Dbxref=NCBI_GP:KKZ56647.1;Name=KKZ56647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633310.1;locus_tag=AAX15_01665;product=hypothetical protein;protein_id=KKZ56647.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 35463 36146 . - . ID=gene-AAX15_01670;Name=AAX15_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01670 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 35463 36146 . - 0 ID=cds-KKZ56602.1;Parent=gene-AAX15_01670;Dbxref=NCBI_GP:KKZ56602.1;Name=KKZ56602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639946.1;locus_tag=AAX15_01670;product=hypothetical protein;protein_id=KKZ56602.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 36146 36862 . - . ID=gene-AAX15_01675;Name=AAX15_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01675 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 36146 36862 . - 0 ID=cds-KKZ56648.1;Parent=gene-AAX15_01675;Dbxref=NCBI_GP:KKZ56648.1;Name=KKZ56648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631451.1;locus_tag=AAX15_01675;product=hypothetical protein;protein_id=KKZ56648.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 36856 37374 . - . ID=gene-AAX15_01680;Name=AAX15_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01680 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 36856 37374 . - 0 ID=cds-KKZ56603.1;Parent=gene-AAX15_01680;Dbxref=NCBI_GP:KKZ56603.1;Name=KKZ56603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645912.1;locus_tag=AAX15_01680;product=hypothetical protein;protein_id=KKZ56603.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 37574 38377 . + . ID=gene-AAX15_01685;Name=AAX15_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01685 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 37574 38377 . + 0 ID=cds-KKZ56604.1;Parent=gene-AAX15_01685;Dbxref=NCBI_GP:KKZ56604.1;Name=KKZ56604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636952.1;locus_tag=AAX15_01685;product=inositol monophosphatase;protein_id=KKZ56604.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 38617 40524 . + . ID=gene-AAX15_01690;Name=AAX15_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01690 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 38617 40524 . + 0 ID=cds-KKZ56605.1;Parent=gene-AAX15_01690;Dbxref=NCBI_GP:KKZ56605.1;Name=KKZ56605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44944.1;locus_tag=AAX15_01690;product=cytochrome C biogenesis protein CcmF;protein_id=KKZ56605.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 40524 41054 . + . ID=gene-AAX15_01695;Name=AAX15_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01695 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 40524 41054 . + 0 ID=cds-KKZ56606.1;Parent=gene-AAX15_01695;Dbxref=NCBI_GP:KKZ56606.1;Name=KKZ56606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627344.1;locus_tag=AAX15_01695;product=thiol:disulfide interchange protein DsbE;protein_id=KKZ56606.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 41051 42208 . + . ID=gene-AAX15_01700;Name=AAX15_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01700 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 41051 42208 . + 0 ID=cds-KKZ56607.1;Parent=gene-AAX15_01700;Dbxref=NCBI_GP:KKZ56607.1;Name=KKZ56607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627342.1;locus_tag=AAX15_01700;product=nitrite reductase;protein_id=KKZ56607.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 42205 43410 . + . ID=gene-AAX15_01705;Name=AAX15_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01705 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 42205 43410 . + 0 ID=cds-KKZ56608.1;Parent=gene-AAX15_01705;Dbxref=NCBI_GP:KKZ56608.1;Name=KKZ56608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627340.1;locus_tag=AAX15_01705;product=hypothetical protein;protein_id=KKZ56608.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 43633 43815 . + . ID=gene-AAX15_01710;Name=AAX15_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01710 GCA_001008275.1|LCTH01000014.1 GeneMarkS+ CDS 43633 43815 . + 0 ID=cds-KKZ56609.1;Parent=gene-AAX15_01710;Dbxref=NCBI_GP:KKZ56609.1;Name=KKZ56609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_01710;product=hypothetical protein;protein_id=KKZ56609.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 43863 44132 . - . ID=gene-AAX15_01715;Name=AAX15_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01715 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 43863 44132 . - 0 ID=cds-KKZ56610.1;Parent=gene-AAX15_01715;Dbxref=NCBI_GP:KKZ56610.1;Name=KKZ56610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241376.1;locus_tag=AAX15_01715;product=redox protein;protein_id=KKZ56610.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 44150 45370 . - . ID=gene-AAX15_01720;Name=AAX15_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01720 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 44150 45370 . - 0 ID=cds-KKZ56611.1;Parent=gene-AAX15_01720;Dbxref=NCBI_GP:KKZ56611.1;Name=KKZ56611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500350.1;locus_tag=AAX15_01720;product=hypothetical protein;protein_id=KKZ56611.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 45574 46197 . - . ID=gene-AAX15_01725;Name=AAX15_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01725 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 45574 46197 . - 0 ID=cds-KKZ56612.1;Parent=gene-AAX15_01725;Dbxref=NCBI_GP:KKZ56612.1;Name=KKZ56612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639932.1;locus_tag=AAX15_01725;product=peptidylprolyl isomerase;protein_id=KKZ56612.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 46223 47092 . - . ID=gene-AAX15_01730;Name=AAX15_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01730 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 46223 47092 . - 0 ID=cds-KKZ56649.1;Parent=gene-AAX15_01730;Dbxref=NCBI_GP:KKZ56649.1;Name=KKZ56649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646254.1;locus_tag=AAX15_01730;product=phosphatidylserine decarboxylase;protein_id=KKZ56649.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 47235 48221 . + . ID=gene-AAX15_01735;Name=AAX15_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01735 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 47235 48221 . + 0 ID=cds-KKZ56613.1;Parent=gene-AAX15_01735;Dbxref=NCBI_GP:KKZ56613.1;Name=KKZ56613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633289.1;locus_tag=AAX15_01735;product=ABC transporter permease;protein_id=KKZ56613.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 48235 49611 . + . ID=gene-AAX15_01740;Name=AAX15_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01740 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 48235 49611 . + 0 ID=cds-KKZ56614.1;Parent=gene-AAX15_01740;Dbxref=NCBI_GP:KKZ56614.1;Name=KKZ56614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638954.1;locus_tag=AAX15_01740;product=thiosulfate sulfurtransferase;protein_id=KKZ56614.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 49701 50225 . + . ID=gene-AAX15_01745;Name=AAX15_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01745 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 49701 50225 . + 0 ID=cds-KKZ56615.1;Parent=gene-AAX15_01745;Dbxref=NCBI_GP:KKZ56615.1;Name=KKZ56615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639928.1;locus_tag=AAX15_01745;product=hypothetical protein;protein_id=KKZ56615.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 50248 50418 . + . ID=gene-AAX15_01750;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AAX15_01750 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 50248 50418 . + 0 ID=cds-KKZ56616.1;Parent=gene-AAX15_01750;Dbxref=NCBI_GP:KKZ56616.1;Name=KKZ56616.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CJS9.2;locus_tag=AAX15_01750;product=50S ribosomal protein L32;protein_id=KKZ56616.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 50440 51459 . + . ID=gene-AAX15_01755;Name=AAX15_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01755 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 50440 51459 . + 0 ID=cds-KKZ56617.1;Parent=gene-AAX15_01755;Dbxref=NCBI_GP:KKZ56617.1;Name=KKZ56617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639926.1;locus_tag=AAX15_01755;product=phosphate acyltransferase;protein_id=KKZ56617.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 51480 52430 . + . ID=gene-AAX15_01760;Name=AAX15_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01760 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 51480 52430 . + 0 ID=cds-KKZ56618.1;Parent=gene-AAX15_01760;Dbxref=NCBI_GP:KKZ56618.1;Name=KKZ56618.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550567.1;locus_tag=AAX15_01760;product=3-oxoacyl-ACP synthase;protein_id=KKZ56618.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 53058 53996 . + . ID=gene-AAX15_01765;Name=AAX15_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01765 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 53058 53996 . + 0 ID=cds-KKZ56619.1;Parent=gene-AAX15_01765;Dbxref=NCBI_GP:KKZ56619.1;Name=KKZ56619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500360.1;locus_tag=AAX15_01765;product=malonyl CoA-ACP transacylase;protein_id=KKZ56619.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 54009 54737 . + . ID=gene-AAX15_01770;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AAX15_01770 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 54009 54737 . + 0 ID=cds-KKZ56620.1;Parent=gene-AAX15_01770;Dbxref=NCBI_GP:KKZ56620.1;Name=KKZ56620.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646241.1;locus_tag=AAX15_01770;product=3-ketoacyl-ACP reductase;protein_id=KKZ56620.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 55010 55240 . + . ID=gene-AAX15_01775;Name=AAX15_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01775 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 55010 55240 . + 0 ID=cds-KKZ56621.1;Parent=gene-AAX15_01775;Dbxref=NCBI_GP:KKZ56621.1;Name=KKZ56621.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805595.1;locus_tag=AAX15_01775;product=acyl carrier protein;protein_id=KKZ56621.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 55445 56776 . + . ID=gene-AAX15_01780;Name=AAX15_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01780 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 55445 56776 . + 0 ID=cds-KKZ56622.1;Parent=gene-AAX15_01780;Dbxref=NCBI_GP:KKZ56622.1;Name=KKZ56622.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633267.1;locus_tag=AAX15_01780;product=C4-dicarboxylate transporter;protein_id=KKZ56622.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 56836 57543 . + . ID=gene-AAX15_01785;Name=AAX15_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01785 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 56836 57543 . + 0 ID=cds-KKZ56623.1;Parent=gene-AAX15_01785;Dbxref=NCBI_GP:KKZ56623.1;Name=KKZ56623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500363.1;locus_tag=AAX15_01785;product=4'-phosphopantetheinyl transferase;protein_id=KKZ56623.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 57715 57936 . + . ID=gene-AAX15_01790;Name=AAX15_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01790 GCA_001008275.1|LCTH01000014.1 GeneMarkS+ CDS 57715 57936 . + 0 ID=cds-KKZ56624.1;Parent=gene-AAX15_01790;Dbxref=NCBI_GP:KKZ56624.1;Name=KKZ56624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_01790;product=hypothetical protein;protein_id=KKZ56624.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 57953 58357 . + . ID=gene-AAX15_01795;Name=AAX15_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01795 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 57953 58357 . + 0 ID=cds-KKZ56650.1;Parent=gene-AAX15_01795;Dbxref=NCBI_GP:KKZ56650.1;Name=KKZ56650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500365.1;locus_tag=AAX15_01795;product=hypothetical protein;protein_id=KKZ56650.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 58515 58757 . + . ID=gene-AAX15_01800;Name=AAX15_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01800 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 58515 58757 . + 0 ID=cds-KKZ56625.1;Parent=gene-AAX15_01800;Dbxref=NCBI_GP:KKZ56625.1;Name=KKZ56625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002253963.1;locus_tag=AAX15_01800;product=hypothetical protein;protein_id=KKZ56625.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 58852 59184 . + . ID=gene-AAX15_01805;Name=AAX15_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01805 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 58852 59184 . + 0 ID=cds-KKZ56651.1;Parent=gene-AAX15_01805;Dbxref=NCBI_GP:KKZ56651.1;Name=KKZ56651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500365.1;locus_tag=AAX15_01805;product=hypothetical protein;protein_id=KKZ56651.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 59247 59543 . + . ID=gene-AAX15_01810;Name=AAX15_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01810 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 59247 59543 . + 0 ID=cds-KKZ56626.1;Parent=gene-AAX15_01810;Dbxref=NCBI_GP:KKZ56626.1;Name=KKZ56626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012886551.1;locus_tag=AAX15_01810;product=hypothetical protein;protein_id=KKZ56626.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 60007 61242 . + . ID=gene-AAX15_01815;Name=AAX15_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01815 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 60007 61242 . + 0 ID=cds-KKZ56627.1;Parent=gene-AAX15_01815;Dbxref=NCBI_GP:KKZ56627.1;Name=KKZ56627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646231.1;locus_tag=AAX15_01815;product=membrane protease HflK;protein_id=KKZ56627.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 61242 62129 . + . ID=gene-AAX15_01820;Name=AAX15_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01820 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 61242 62129 . + 0 ID=cds-KKZ56628.1;Parent=gene-AAX15_01820;Dbxref=NCBI_GP:KKZ56628.1;Name=KKZ56628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550571.1;locus_tag=AAX15_01820;product=protein HflC;protein_id=KKZ56628.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Protein Homology pseudogene 62172 62606 . - . ID=gene-AAX15_01825;Name=AAX15_01825;Note=disrupted;description=isoprenylcysteine carboxyl methyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_01825;pseudo=true GCA_001008275.1|LCTH01000014.1 Genbank gene 62670 64133 . - . ID=gene-AAX15_01830;Name=AAX15_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01830 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 62670 64133 . - 0 ID=cds-KKZ56629.1;Parent=gene-AAX15_01830;Dbxref=NCBI_GP:KKZ56629.1;Name=KKZ56629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638974.1;locus_tag=AAX15_01830;product=PTS glucose transporter subunit IIBC;protein_id=KKZ56629.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 64221 65348 . - . ID=gene-AAX15_01835;Name=AAX15_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01835 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 64221 65348 . - 0 ID=cds-KKZ56630.1;Parent=gene-AAX15_01835;Dbxref=NCBI_GP:KKZ56630.1;Name=KKZ56630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638976.1;locus_tag=AAX15_01835;product=N-acetylneuraminic acid mutarotase;protein_id=KKZ56630.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 65472 67322 . - . ID=gene-AAX15_01840;Name=AAX15_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01840 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 65472 67322 . - 0 ID=cds-KKZ56631.1;Parent=gene-AAX15_01840;Dbxref=NCBI_GP:KKZ56631.1;Name=KKZ56631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500372.1;locus_tag=AAX15_01840;product=C4-dicarboxylate ABC transporter permease;protein_id=KKZ56631.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 67394 68377 . - . ID=gene-AAX15_01845;Name=AAX15_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01845 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 67394 68377 . - 0 ID=cds-KKZ56632.1;Parent=gene-AAX15_01845;Dbxref=NCBI_GP:KKZ56632.1;Name=KKZ56632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633250.1;locus_tag=AAX15_01845;product=sialic acid-binding protein;protein_id=KKZ56632.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 68741 69427 . + . ID=gene-AAX15_01850;Name=AAX15_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01850 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 68741 69427 . + 0 ID=cds-KKZ56633.1;Parent=gene-AAX15_01850;Dbxref=NCBI_GP:KKZ56633.1;Name=KKZ56633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689955.1;locus_tag=AAX15_01850;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=KKZ56633.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 69473 70375 . + . ID=gene-AAX15_01855;Name=AAX15_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01855 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 69473 70375 . + 0 ID=cds-KKZ56634.1;Parent=gene-AAX15_01855;Dbxref=NCBI_GP:KKZ56634.1;Name=KKZ56634.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631505.1;locus_tag=AAX15_01855;product=N-acetylmannosamine kinase;protein_id=KKZ56634.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 70368 71234 . + . ID=gene-AAX15_01860;Name=AAX15_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01860 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 70368 71234 . + 0 ID=cds-KKZ56635.1;Parent=gene-AAX15_01860;Dbxref=NCBI_GP:KKZ56635.1;Name=KKZ56635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625613.1;locus_tag=AAX15_01860;product=N-acetylmannosamine kinase;protein_id=KKZ56635.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 71245 72123 . + . ID=gene-AAX15_01865;Name=AAX15_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01865 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 71245 72123 . + 0 ID=cds-KKZ56636.1;Parent=gene-AAX15_01865;Dbxref=NCBI_GP:KKZ56636.1;Name=KKZ56636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500376.1;locus_tag=AAX15_01865;product=N-acetylneuraminate lyase;protein_id=KKZ56636.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 72301 73104 . + . ID=gene-AAX15_01870;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AAX15_01870 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 72301 73104 . + 0 ID=cds-KKZ56637.1;Parent=gene-AAX15_01870;Dbxref=NCBI_GP:KKZ56637.1;Name=KKZ56637.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500377.1;locus_tag=AAX15_01870;product=glucosamine-6-phosphate deaminase;protein_id=KKZ56637.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 73162 74307 . + . ID=gene-AAX15_01875;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AAX15_01875 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 73162 74307 . + 0 ID=cds-KKZ56638.1;Parent=gene-AAX15_01875;Dbxref=NCBI_GP:KKZ56638.1;Name=KKZ56638.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639886.1;locus_tag=AAX15_01875;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=KKZ56638.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 74440 75195 . + . ID=gene-AAX15_01880;Name=AAX15_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01880 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 74440 75195 . + 0 ID=cds-KKZ56639.1;Parent=gene-AAX15_01880;Dbxref=NCBI_GP:KKZ56639.1;Name=KKZ56639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525473.1;locus_tag=AAX15_01880;product=hypothetical protein;protein_id=KKZ56639.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 75271 75972 . - . ID=gene-AAX15_01885;Name=AAX15_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01885 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 75271 75972 . - 0 ID=cds-KKZ56640.1;Parent=gene-AAX15_01885;Dbxref=NCBI_GP:KKZ56640.1;Name=KKZ56640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625604.1;locus_tag=AAX15_01885;product=hypothetical protein;protein_id=KKZ56640.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 76297 78744 . + . ID=gene-AAX15_01890;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AAX15_01890 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 76297 78744 . + 0 ID=cds-KKZ56641.1;Parent=gene-AAX15_01890;Dbxref=NCBI_GP:KKZ56641.1;Name=KKZ56641.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44505.1;locus_tag=AAX15_01890;product=aspartate kinase;protein_id=KKZ56641.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 78757 79701 . + . ID=gene-AAX15_01895;Name=AAX15_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01895 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 78757 79701 . + 0 ID=cds-KKZ56642.1;Parent=gene-AAX15_01895;Dbxref=NCBI_GP:KKZ56642.1;Name=KKZ56642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QP96.1;locus_tag=AAX15_01895;product=serine kinase;protein_id=KKZ56642.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 79733 81007 . + . ID=gene-AAX15_01900;Name=AAX15_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01900 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 79733 81007 . + 0 ID=cds-KKZ56643.1;Parent=gene-AAX15_01900;Dbxref=NCBI_GP:KKZ56643.1;Name=KKZ56643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658376.1;locus_tag=AAX15_01900;product=threonine synthase;protein_id=KKZ56643.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 81220 81295 . - . ID=gene-AAX15_01905;Name=AAX15_01905;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_01905 GCA_001008275.1|LCTH01000014.1 tRNAscan-SE tRNA 81220 81295 . - . ID=rna-AAX15_01905;Parent=gene-AAX15_01905;anticodon=(pos:complement(81260..81262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01905;product=tRNA-Lys GCA_001008275.1|LCTH01000014.1 tRNAscan-SE exon 81220 81295 . - . ID=exon-AAX15_01905-1;Parent=rna-AAX15_01905;anticodon=(pos:complement(81260..81262));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01905;product=tRNA-Lys GCA_001008275.1|LCTH01000014.1 Genbank gene 81315 81401 . - . ID=gene-AAX15_01910;Name=AAX15_01910;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_01910 GCA_001008275.1|LCTH01000014.1 tRNAscan-SE tRNA 81315 81401 . - . ID=rna-AAX15_01910;Parent=gene-AAX15_01910;anticodon=(pos:complement(81365..81367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01910;product=tRNA-Leu GCA_001008275.1|LCTH01000014.1 tRNAscan-SE exon 81315 81401 . - . ID=exon-AAX15_01910-1;Parent=rna-AAX15_01910;anticodon=(pos:complement(81365..81367));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01910;product=tRNA-Leu GCA_001008275.1|LCTH01000014.1 Genbank gene 81429 81502 . - . ID=gene-AAX15_01915;Name=AAX15_01915;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_01915 GCA_001008275.1|LCTH01000014.1 tRNAscan-SE tRNA 81429 81502 . - . ID=rna-AAX15_01915;Parent=gene-AAX15_01915;anticodon=(pos:complement(81468..81470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01915;product=tRNA-Cys GCA_001008275.1|LCTH01000014.1 tRNAscan-SE exon 81429 81502 . - . ID=exon-AAX15_01915-1;Parent=rna-AAX15_01915;anticodon=(pos:complement(81468..81470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01915;product=tRNA-Cys GCA_001008275.1|LCTH01000014.1 Genbank gene 81509 81584 . - . ID=gene-AAX15_01920;Name=AAX15_01920;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_01920 GCA_001008275.1|LCTH01000014.1 tRNAscan-SE tRNA 81509 81584 . - . ID=rna-AAX15_01920;Parent=gene-AAX15_01920;anticodon=(pos:complement(81549..81551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01920;product=tRNA-Gly GCA_001008275.1|LCTH01000014.1 tRNAscan-SE exon 81509 81584 . - . ID=exon-AAX15_01920-1;Parent=rna-AAX15_01920;anticodon=(pos:complement(81549..81551));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_01920;product=tRNA-Gly GCA_001008275.1|LCTH01000014.1 Genbank gene 81830 82939 . + . ID=gene-AAX15_01925;Name=AAX15_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01925 GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 81830 82939 . + 0 ID=cds-KKZ56644.1;Parent=gene-AAX15_01925;Dbxref=NCBI_GP:KKZ56644.1;Name=KKZ56644.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44502.1;locus_tag=AAX15_01925;product=cystathionine gamma-synthase;protein_id=KKZ56644.1;transl_table=11 GCA_001008275.1|LCTH01000014.1 Genbank gene 82952 83611 . + . ID=gene-AAX15_01930;Name=AAX15_01930;end_range=83611,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01930;partial=true GCA_001008275.1|LCTH01000014.1 Protein Homology CDS 82952 83611 . + 0 ID=cds-KKZ56645.1;Parent=gene-AAX15_01930;Dbxref=NCBI_GP:KKZ56645.1;Name=KKZ56645.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;end_range=83611,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630164.1;locus_tag=AAX15_01930;partial=true;product=lactate dehydrogenase;protein_id=KKZ56645.1;transl_table=11 ##sequence-region LCTH01000015.1 1 32329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000015.1 Genbank region 1 32329 . + . ID=LCTH01000015.1:1..32329;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000015.1 Genbank gene 23 673 . - . ID=gene-AAX15_01935;Name=AAX15_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01935 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 23 673 . - 0 ID=cds-KKZ56442.1;Parent=gene-AAX15_01935;Dbxref=NCBI_GP:KKZ56442.1;Name=KKZ56442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639470.1;locus_tag=AAX15_01935;product=GTP cyclohydrolase;protein_id=KKZ56442.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 743 1468 . + . ID=gene-AAX15_01940;Name=AAX15_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01940 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 743 1468 . + 0 ID=cds-KKZ56443.1;Parent=gene-AAX15_01940;Dbxref=NCBI_GP:KKZ56443.1;Name=KKZ56443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653880.1;locus_tag=AAX15_01940;product=phosphatidylglycerophosphatase;protein_id=KKZ56443.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 1532 2446 . + . ID=gene-AAX15_01945;Name=AAX15_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01945 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 1532 2446 . + 0 ID=cds-KKZ56444.1;Parent=gene-AAX15_01945;Dbxref=NCBI_GP:KKZ56444.1;Name=KKZ56444.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996293.1;locus_tag=AAX15_01945;product=N-acetylglucosamine kinase;protein_id=KKZ56444.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 2630 4069 . + . ID=gene-AAX15_01950;Name=AAX15_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01950 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 2630 4069 . + 0 ID=cds-KKZ56445.1;Parent=gene-AAX15_01950;Dbxref=NCBI_GP:KKZ56445.1;Name=KKZ56445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648689.1;locus_tag=AAX15_01950;product=sodium:alanine symporter;protein_id=KKZ56445.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 4242 4469 . + . ID=gene-AAX15_01955;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AAX15_01955 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 4242 4469 . + 0 ID=cds-KKZ56446.1;Parent=gene-AAX15_01955;Dbxref=NCBI_GP:KKZ56446.1;Name=KKZ56446.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629124.1;locus_tag=AAX15_01955;product=preprotein translocase subunit SecA;protein_id=KKZ56446.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 4473 5033 . + . ID=gene-AAX15_01960;Name=AAX15_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01960 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 4473 5033 . + 0 ID=cds-KKZ56447.1;Parent=gene-AAX15_01960;Dbxref=NCBI_GP:KKZ56447.1;Name=KKZ56447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646668.1;locus_tag=AAX15_01960;product=preprotein translocase subunit TatB;protein_id=KKZ56447.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 5043 5813 . + . ID=gene-AAX15_01965;Name=AAX15_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01965 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 5043 5813 . + 0 ID=cds-KKZ56448.1;Parent=gene-AAX15_01965;Dbxref=NCBI_GP:KKZ56448.1;Name=KKZ56448.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639479.1;locus_tag=AAX15_01965;product=twin-arginine protein translocation system subunit TatC;protein_id=KKZ56448.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 6189 7538 . + . ID=gene-AAX15_01970;Name=AAX15_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01970 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 6189 7538 . + 0 ID=cds-KKZ56449.1;Parent=gene-AAX15_01970;Dbxref=NCBI_GP:KKZ56449.1;Name=KKZ56449.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630640.1;locus_tag=AAX15_01970;product=glutamate dehydrogenase;protein_id=KKZ56449.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 7645 8088 . - . ID=gene-AAX15_01975;Name=AAX15_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01975 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 7645 8088 . - 0 ID=cds-KKZ56450.1;Parent=gene-AAX15_01975;Dbxref=NCBI_GP:KKZ56450.1;Name=KKZ56450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629133.1;locus_tag=AAX15_01975;product=Fur family transcriptional regulator;protein_id=KKZ56450.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 8118 8642 . - . ID=gene-AAX15_01980;Name=AAX15_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01980 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 8118 8642 . - 0 ID=cds-KKZ56451.1;Parent=gene-AAX15_01980;Dbxref=NCBI_GP:KKZ56451.1;Name=KKZ56451.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664331.1;locus_tag=AAX15_01980;product=flavodoxin FldA;protein_id=KKZ56451.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 8741 9523 . - . ID=gene-AAX15_01985;Name=AAX15_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01985 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 8741 9523 . - 0 ID=cds-KKZ56452.1;Parent=gene-AAX15_01985;Dbxref=NCBI_GP:KKZ56452.1;Name=KKZ56452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500067.1;locus_tag=AAX15_01985;product=acyl-CoA esterase;protein_id=KKZ56452.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 9593 10204 . + . ID=gene-AAX15_01990;Name=AAX15_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01990 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 9593 10204 . + 0 ID=cds-KKZ56453.1;Parent=gene-AAX15_01990;Dbxref=NCBI_GP:KKZ56453.1;Name=KKZ56453.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638757.1;locus_tag=AAX15_01990;product=replication initiation regulator SeqA;protein_id=KKZ56453.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 10207 11568 . + . ID=gene-AAX15_01995;Name=AAX15_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_01995 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 10207 11568 . + 0 ID=cds-KKZ56469.1;Parent=gene-AAX15_01995;Dbxref=NCBI_GP:KKZ56469.1;Name=KKZ56469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629143.1;locus_tag=AAX15_01995;product=O-succinylbenzoic acid--CoA ligase;protein_id=KKZ56469.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 11585 14923 . + . ID=gene-AAX15_02000;Name=AAX15_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02000 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 11585 14923 . + 0 ID=cds-KKZ56454.1;Parent=gene-AAX15_02000;Dbxref=NCBI_GP:KKZ56454.1;Name=KKZ56454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646538.1;locus_tag=AAX15_02000;product=hypothetical protein;protein_id=KKZ56454.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 14935 16008 . + . ID=gene-AAX15_02005;Name=AAX15_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02005 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 14935 16008 . + 0 ID=cds-KKZ56455.1;Parent=gene-AAX15_02005;Dbxref=NCBI_GP:KKZ56455.1;Name=KKZ56455.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630662.1;locus_tag=AAX15_02005;product=chorismate synthase;protein_id=KKZ56455.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 16312 17172 . + . ID=gene-AAX15_02010;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AAX15_02010 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 16312 17172 . + 0 ID=cds-KKZ56456.1;Parent=gene-AAX15_02010;Dbxref=NCBI_GP:KKZ56456.1;Name=KKZ56456.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701442.1;locus_tag=AAX15_02010;product=murein endopeptidase;protein_id=KKZ56456.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 17190 17957 . + . ID=gene-AAX15_02015;Name=AAX15_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02015 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 17190 17957 . + 0 ID=cds-KKZ56457.1;Parent=gene-AAX15_02015;Dbxref=NCBI_GP:KKZ56457.1;Name=KKZ56457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689688.1;locus_tag=AAX15_02015;product=hypothetical protein;protein_id=KKZ56457.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 18004 18960 . + . ID=gene-AAX15_02020;Name=AAX15_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02020 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 18004 18960 . + 0 ID=cds-KKZ56458.1;Parent=gene-AAX15_02020;Dbxref=NCBI_GP:KKZ56458.1;Name=KKZ56458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701444.1;locus_tag=AAX15_02020;product=lauroyl acyltransferase;protein_id=KKZ56458.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 19087 20058 . + . ID=gene-AAX15_02025;Name=AAX15_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02025 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 19087 20058 . + 0 ID=cds-KKZ56459.1;Parent=gene-AAX15_02025;Dbxref=NCBI_GP:KKZ56459.1;Name=KKZ56459.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500059.1;locus_tag=AAX15_02025;product=selenophosphate synthetase;protein_id=KKZ56459.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 20110 21399 . - . ID=gene-AAX15_02030;Name=AAX15_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02030 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 20110 21399 . - 0 ID=cds-KKZ56460.1;Parent=gene-AAX15_02030;Dbxref=NCBI_GP:KKZ56460.1;Name=KKZ56460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635412.1;locus_tag=AAX15_02030;product=seryl-tRNA synthetase;protein_id=KKZ56460.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Protein Homology pseudogene 21524 21817 . + . ID=gene-AAX15_02035;Name=AAX15_02035;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_02035;pseudo=true GCA_001008275.1|LCTH01000015.1 Genbank gene 21938 22156 . + . ID=gene-AAX15_02040;Name=AAX15_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02040 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 21938 22156 . + 0 ID=cds-KKZ56461.1;Parent=gene-AAX15_02040;Dbxref=NCBI_GP:KKZ56461.1;Name=KKZ56461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630674.1;locus_tag=AAX15_02040;product=hypothetical protein;protein_id=KKZ56461.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 22201 22680 . - . ID=gene-AAX15_02045;Name=AAX15_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02045 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 22201 22680 . - 0 ID=cds-KKZ56462.1;Parent=gene-AAX15_02045;Dbxref=NCBI_GP:KKZ56462.1;Name=KKZ56462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054815.1;locus_tag=AAX15_02045;product=membrane protein;protein_id=KKZ56462.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 22682 23452 . - . ID=gene-AAX15_02050;Name=AAX15_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02050 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 22682 23452 . - 0 ID=cds-KKZ56463.1;Parent=gene-AAX15_02050;Dbxref=NCBI_GP:KKZ56463.1;Name=KKZ56463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704932.1;locus_tag=AAX15_02050;product=membrane protein;protein_id=KKZ56463.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 23656 26940 . + . ID=gene-AAX15_02055;Name=AAX15_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02055 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 23656 26940 . + 0 ID=cds-KKZ56464.1;Parent=gene-AAX15_02055;Dbxref=NCBI_GP:KKZ56464.1;Name=KKZ56464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634903.1;locus_tag=AAX15_02055;product=TonB-dependent receptor;protein_id=KKZ56464.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 27040 27870 . + . ID=gene-AAX15_02060;Name=AAX15_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02060 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 27040 27870 . + 0 ID=cds-KKZ56465.1;Parent=gene-AAX15_02060;Dbxref=NCBI_GP:KKZ56465.1;Name=KKZ56465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634901.1;locus_tag=AAX15_02060;product=polymerase;protein_id=KKZ56465.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 27925 29364 . + . ID=gene-AAX15_02065;Name=AAX15_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02065 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 27925 29364 . + 0 ID=cds-KKZ56466.1;Parent=gene-AAX15_02065;Dbxref=NCBI_GP:KKZ56466.1;Name=KKZ56466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634899.1;locus_tag=AAX15_02065;product=hypothetical protein;protein_id=KKZ56466.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 29440 30702 . - . ID=gene-AAX15_02070;Name=AAX15_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02070 GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 29440 30702 . - 0 ID=cds-KKZ56467.1;Parent=gene-AAX15_02070;Dbxref=NCBI_GP:KKZ56467.1;Name=KKZ56467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57017.2;locus_tag=AAX15_02070;product=hypothetical protein;protein_id=KKZ56467.1;transl_table=11 GCA_001008275.1|LCTH01000015.1 Genbank gene 30983 32329 . + . ID=gene-AAX15_02075;Name=AAX15_02075;end_range=32329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02075;partial=true GCA_001008275.1|LCTH01000015.1 Protein Homology CDS 30983 32329 . + 0 ID=cds-KKZ56468.1;Parent=gene-AAX15_02075;Dbxref=NCBI_GP:KKZ56468.1;Name=KKZ56468.1;end_range=32329,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626313.1;locus_tag=AAX15_02075;partial=true;product=signal recognition particle;protein_id=KKZ56468.1;transl_table=11 ##sequence-region LCTH01000016.1 1 7887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000016.1 Genbank region 1 7887 . + . ID=LCTH01000016.1:1..7887;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000016.1 Genbank gene 435 1814 . - . ID=gene-AAX15_02080;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AAX15_02080 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 435 1814 . - 0 ID=cds-KKZ56340.1;Parent=gene-AAX15_02080;Dbxref=NCBI_GP:KKZ56340.1;Name=KKZ56340.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699864.1;locus_tag=AAX15_02080;product=cysteine--tRNA ligase;protein_id=KKZ56340.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 1917 2426 . + . ID=gene-AAX15_02085;Name=AAX15_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02085 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 1917 2426 . + 0 ID=cds-KKZ56341.1;Parent=gene-AAX15_02085;Dbxref=NCBI_GP:KKZ56341.1;Name=KKZ56341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44499.1;locus_tag=AAX15_02085;product=peptidylprolyl isomerase;protein_id=KKZ56341.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 2481 3269 . + . ID=gene-AAX15_02090;Name=AAX15_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02090 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 2481 3269 . + 0 ID=cds-KKZ56342.1;Parent=gene-AAX15_02090;Dbxref=NCBI_GP:KKZ56342.1;Name=KKZ56342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766755.1;locus_tag=AAX15_02090;product=deoxyribonuclease;protein_id=KKZ56342.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 3381 4508 . + . ID=gene-AAX15_02095;Name=AAX15_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02095 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 3381 4508 . + 0 ID=cds-KKZ56343.1;Parent=gene-AAX15_02095;Dbxref=NCBI_GP:KKZ56343.1;Name=KKZ56343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627930.1;locus_tag=AAX15_02095;product=acyl-CoA dehydrogenase;protein_id=KKZ56343.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 4522 5328 . + . ID=gene-AAX15_02100;Name=AAX15_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02100 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 4522 5328 . + 0 ID=cds-KKZ56344.1;Parent=gene-AAX15_02100;Dbxref=NCBI_GP:KKZ56344.1;Name=KKZ56344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643492.1;locus_tag=AAX15_02100;product=phosphonate ABC transporter substrate-binding protein;protein_id=KKZ56344.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 5382 6551 . + . ID=gene-AAX15_02105;Name=AAX15_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02105 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 5382 6551 . + 0 ID=cds-KKZ56345.1;Parent=gene-AAX15_02105;Dbxref=NCBI_GP:KKZ56345.1;Name=KKZ56345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637500.1;locus_tag=AAX15_02105;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=KKZ56345.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 6544 7008 . + . ID=gene-AAX15_02110;Name=AAX15_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02110 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 6544 7008 . + 0 ID=cds-KKZ56346.1;Parent=gene-AAX15_02110;Dbxref=NCBI_GP:KKZ56346.1;Name=KKZ56346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634047.1;locus_tag=AAX15_02110;product=peroxiredoxin;protein_id=KKZ56346.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 7109 7432 . - . ID=gene-AAX15_02115;Name=AAX15_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02115 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 7109 7432 . - 0 ID=cds-KKZ56347.1;Parent=gene-AAX15_02115;Dbxref=NCBI_GP:KKZ56347.1;Name=KKZ56347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43785.1;locus_tag=AAX15_02115;product=thioredoxin;protein_id=KKZ56347.1;transl_table=11 GCA_001008275.1|LCTH01000016.1 Genbank gene 7552 7881 . - . ID=gene-AAX15_02120;Name=AAX15_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02120 GCA_001008275.1|LCTH01000016.1 Protein Homology CDS 7552 7881 . - 0 ID=cds-KKZ56348.1;Parent=gene-AAX15_02120;Dbxref=NCBI_GP:KKZ56348.1;Name=KKZ56348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054803.1;locus_tag=AAX15_02120;product=hypothetical protein;protein_id=KKZ56348.1;transl_table=11 ##sequence-region LCTH01000017.1 1 39238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000017.1 Genbank region 1 39238 . + . ID=LCTH01000017.1:1..39238;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000017.1 Genbank gene 1 589 . - . ID=gene-AAX15_02125;Name=AAX15_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02125;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 1 589 . - 0 ID=cds-KKZ56277.1;Parent=gene-AAX15_02125;Dbxref=NCBI_GP:KKZ56277.1;Name=KKZ56277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272069.1;locus_tag=AAX15_02125;partial=true;product=membrane protein;protein_id=KKZ56277.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 779 3190 . + . ID=gene-AAX15_02130;Name=AAX15_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02130 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 779 3190 . + 0 ID=cds-KKZ56244.1;Parent=gene-AAX15_02130;Dbxref=NCBI_GP:KKZ56244.1;Name=KKZ56244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640931.1;locus_tag=AAX15_02130;product=DNA-binding protein;protein_id=KKZ56244.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 3307 4458 . + . ID=gene-AAX15_02135;Name=AAX15_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02135 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 3307 4458 . + 0 ID=cds-KKZ56245.1;Parent=gene-AAX15_02135;Dbxref=NCBI_GP:KKZ56245.1;Name=KKZ56245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701684.1;locus_tag=AAX15_02135;product=coproporphyrinogen III oxidase;protein_id=KKZ56245.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 4561 5220 . + . ID=gene-AAX15_02140;Name=AAX15_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02140 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 4561 5220 . + 0 ID=cds-KKZ56246.1;Parent=gene-AAX15_02140;Dbxref=NCBI_GP:KKZ56246.1;Name=KKZ56246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499634.1;locus_tag=AAX15_02140;product=ribose-5-phosphate isomerase A;protein_id=KKZ56246.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 5250 6482 . + . ID=gene-AAX15_02145;Name=AAX15_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02145 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 5250 6482 . + 0 ID=cds-KKZ56247.1;Parent=gene-AAX15_02145;Dbxref=NCBI_GP:KKZ56247.1;Name=KKZ56247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43885.1;locus_tag=AAX15_02145;product=3-phosphoglycerate dehydrogenase;protein_id=KKZ56247.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 6940 9525 . - . ID=gene-AAX15_02150;Name=AAX15_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02150 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 6940 9525 . - 0 ID=cds-KKZ56248.1;Parent=gene-AAX15_02150;Dbxref=NCBI_GP:KKZ56248.1;Name=KKZ56248.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638423.1;locus_tag=AAX15_02150;product=DNA mismatch repair protein MutS;protein_id=KKZ56248.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 9710 10990 . + . ID=gene-AAX15_02155;Name=AAX15_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02155 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 9710 10990 . + 0 ID=cds-KKZ56249.1;Parent=gene-AAX15_02155;Dbxref=NCBI_GP:KKZ56249.1;Name=KKZ56249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699348.1;locus_tag=AAX15_02155;product=integrase;protein_id=KKZ56249.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Protein Homology pseudogene 11010 12152 . - . ID=gene-AAX15_02160;Name=AAX15_02160;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_02160;pseudo=true GCA_001008275.1|LCTH01000017.1 Genbank gene 12419 12835 . - . ID=gene-AAX15_02165;Name=AAX15_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02165 GCA_001008275.1|LCTH01000017.1 GeneMarkS+ CDS 12419 12835 . - 0 ID=cds-KKZ56250.1;Parent=gene-AAX15_02165;Dbxref=NCBI_GP:KKZ56250.1;Name=KKZ56250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_02165;product=hypothetical protein;protein_id=KKZ56250.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 12842 13357 . - . ID=gene-AAX15_02170;Name=AAX15_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02170 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 12842 13357 . - 0 ID=cds-KKZ56251.1;Parent=gene-AAX15_02170;Dbxref=NCBI_GP:KKZ56251.1;Name=KKZ56251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019845032.1;locus_tag=AAX15_02170;product=hypothetical protein;protein_id=KKZ56251.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 13466 13834 . + . ID=gene-AAX15_02175;Name=AAX15_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02175 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 13466 13834 . + 0 ID=cds-KKZ56252.1;Parent=gene-AAX15_02175;Dbxref=NCBI_GP:KKZ56252.1;Name=KKZ56252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699313.1;locus_tag=AAX15_02175;product=DNA-binding protein;protein_id=KKZ56252.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 14318 14740 . - . ID=gene-AAX15_02180;Name=AAX15_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02180 GCA_001008275.1|LCTH01000017.1 GeneMarkS+ CDS 14318 14740 . - 0 ID=cds-KKZ56253.1;Parent=gene-AAX15_02180;Dbxref=NCBI_GP:KKZ56253.1;Name=KKZ56253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_02180;product=hypothetical protein;protein_id=KKZ56253.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 15175 16218 . + . ID=gene-AAX15_02185;Name=AAX15_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02185 GCA_001008275.1|LCTH01000017.1 GeneMarkS+ CDS 15175 16218 . + 0 ID=cds-KKZ56254.1;Parent=gene-AAX15_02185;Dbxref=NCBI_GP:KKZ56254.1;Name=KKZ56254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_02185;product=hypothetical protein;protein_id=KKZ56254.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 16495 17799 . - . ID=gene-AAX15_02190;Name=AAX15_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02190 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 16495 17799 . - 0 ID=cds-KKZ56255.1;Parent=gene-AAX15_02190;Dbxref=NCBI_GP:KKZ56255.1;Name=KKZ56255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633109.1;locus_tag=AAX15_02190;product=membrane protein;protein_id=KKZ56255.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 17823 18008 . - . ID=gene-AAX15_02195;Name=AAX15_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02195 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 17823 18008 . - 0 ID=cds-KKZ56256.1;Parent=gene-AAX15_02195;Dbxref=NCBI_GP:KKZ56256.1;Name=KKZ56256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627136.1;locus_tag=AAX15_02195;product=membrane protein;protein_id=KKZ56256.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 18017 18595 . - . ID=gene-AAX15_02200;Name=AAX15_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02200 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 18017 18595 . - 0 ID=cds-KKZ56257.1;Parent=gene-AAX15_02200;Dbxref=NCBI_GP:KKZ56257.1;Name=KKZ56257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272179.1;locus_tag=AAX15_02200;product=membrane protein;protein_id=KKZ56257.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 18625 19365 . - . ID=gene-AAX15_02205;Name=AAX15_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02205 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 18625 19365 . - 0 ID=cds-KKZ56258.1;Parent=gene-AAX15_02205;Dbxref=NCBI_GP:KKZ56258.1;Name=KKZ56258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629902.1;locus_tag=AAX15_02205;product=stationary phase survival protein SurE;protein_id=KKZ56258.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 19375 20394 . - . ID=gene-AAX15_02210;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=AAX15_02210 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 19375 20394 . - 0 ID=cds-KKZ56259.1;Parent=gene-AAX15_02210;Dbxref=NCBI_GP:KKZ56259.1;Name=KKZ56259.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551102.1;locus_tag=AAX15_02210;product=tRNA pseudouridine synthase D;protein_id=KKZ56259.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 20503 20925 . + . ID=gene-AAX15_02215;Name=AAX15_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02215 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 20503 20925 . + 0 ID=cds-KKZ56260.1;Parent=gene-AAX15_02215;Dbxref=NCBI_GP:KKZ56260.1;Name=KKZ56260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272176.1;locus_tag=AAX15_02215;product=RNase E inhibitor protein;protein_id=KKZ56260.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 20980 21702 . + . ID=gene-AAX15_02220;Name=AAX15_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02220 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 20980 21702 . + 0 ID=cds-KKZ56261.1;Parent=gene-AAX15_02220;Dbxref=NCBI_GP:KKZ56261.1;Name=KKZ56261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638441.1;locus_tag=AAX15_02220;product=hypothetical protein;protein_id=KKZ56261.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 21759 22379 . + . ID=gene-AAX15_02225;Name=AAX15_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02225 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 21759 22379 . + 0 ID=cds-KKZ56262.1;Parent=gene-AAX15_02225;Dbxref=NCBI_GP:KKZ56262.1;Name=KKZ56262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627146.1;locus_tag=AAX15_02225;product=peptidylprolyl isomerase;protein_id=KKZ56262.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 22532 24268 . + . ID=gene-AAX15_02230;Name=AAX15_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02230 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 22532 24268 . + 0 ID=cds-KKZ56263.1;Parent=gene-AAX15_02230;Dbxref=NCBI_GP:KKZ56263.1;Name=KKZ56263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654307.1;locus_tag=AAX15_02230;product=membrane protein;protein_id=KKZ56263.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 24278 28174 . + . ID=gene-AAX15_02235;Name=AAX15_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02235 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 24278 28174 . + 0 ID=cds-KKZ56264.1;Parent=gene-AAX15_02235;Dbxref=NCBI_GP:KKZ56264.1;Name=KKZ56264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638448.1;locus_tag=AAX15_02235;product=tubulin-binding protein;protein_id=KKZ56264.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 28182 29711 . + . ID=gene-AAX15_02240;Name=AAX15_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02240 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 28182 29711 . + 0 ID=cds-KKZ56265.1;Parent=gene-AAX15_02240;Dbxref=NCBI_GP:KKZ56265.1;Name=KKZ56265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500700.1;locus_tag=AAX15_02240;product=exopolyphosphatase;protein_id=KKZ56265.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 29775 30458 . - . ID=gene-AAX15_02245;Name=AAX15_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02245 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 29775 30458 . - 0 ID=cds-KKZ56266.1;Parent=gene-AAX15_02245;Dbxref=NCBI_GP:KKZ56266.1;Name=KKZ56266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638453.1;locus_tag=AAX15_02245;product=pseudouridine synthase;protein_id=KKZ56266.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 30634 31458 . - . ID=gene-AAX15_02250;Name=AAX15_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02250 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 30634 31458 . - 0 ID=cds-KKZ56267.1;Parent=gene-AAX15_02250;Dbxref=NCBI_GP:KKZ56267.1;Name=KKZ56267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701804.1;locus_tag=AAX15_02250;product=membrane protein;protein_id=KKZ56267.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 31683 31961 . + . ID=gene-AAX15_02255;Name=AAX15_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02255 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 31683 31961 . + 0 ID=cds-KKZ56268.1;Parent=gene-AAX15_02255;Dbxref=NCBI_GP:KKZ56268.1;Name=KKZ56268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627159.1;locus_tag=AAX15_02255;product=cell division protein FtsB;protein_id=KKZ56268.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 31961 32638 . + . ID=gene-AAX15_02260;Name=AAX15_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02260 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 31961 32638 . + 0 ID=cds-KKZ56269.1;Parent=gene-AAX15_02260;Dbxref=NCBI_GP:KKZ56269.1;Name=KKZ56269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500704.1;locus_tag=AAX15_02260;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=KKZ56269.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 32635 33111 . + . ID=gene-AAX15_02265;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AAX15_02265 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 32635 33111 . + 0 ID=cds-KKZ56270.1;Parent=gene-AAX15_02265;Dbxref=NCBI_GP:KKZ56270.1;Name=KKZ56270.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44815.1;locus_tag=AAX15_02265;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=KKZ56270.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 33634 34068 . - . ID=gene-AAX15_02270;Name=AAX15_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02270 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 33634 34068 . - 0 ID=cds-KKZ56271.1;Parent=gene-AAX15_02270;Dbxref=NCBI_GP:KKZ56271.1;Name=KKZ56271.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551116.1;locus_tag=AAX15_02270;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=KKZ56271.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 34065 34505 . - . ID=gene-AAX15_02275;Name=AAX15_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02275 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 34065 34505 . - 0 ID=cds-KKZ56272.1;Parent=gene-AAX15_02275;Dbxref=NCBI_GP:KKZ56272.1;Name=KKZ56272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640888.1;locus_tag=AAX15_02275;product=mioC;protein_id=KKZ56272.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 34615 34833 . - . ID=gene-AAX15_02280;Name=AAX15_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02280 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 34615 34833 . - 0 ID=cds-KKZ56273.1;Parent=gene-AAX15_02280;Dbxref=NCBI_GP:KKZ56273.1;Name=KKZ56273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44812.1;locus_tag=AAX15_02280;product=cell division protein ZapB;protein_id=KKZ56273.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 34994 36007 . + . ID=gene-AAX15_02285;Name=AAX15_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02285 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 34994 36007 . + 0 ID=cds-KKZ56274.1;Parent=gene-AAX15_02285;Dbxref=NCBI_GP:KKZ56274.1;Name=KKZ56274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500708.1;locus_tag=AAX15_02285;product=fructose 1%2C6-bisphosphatase;protein_id=KKZ56274.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 36071 36994 . - . ID=gene-AAX15_02290;Name=AAX15_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02290 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 36071 36994 . - 0 ID=cds-KKZ56278.1;Parent=gene-AAX15_02290;Dbxref=NCBI_GP:KKZ56278.1;Name=KKZ56278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627171.1;locus_tag=AAX15_02290;product=pertactin;protein_id=KKZ56278.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 37832 38719 . - . ID=gene-AAX15_02295;Name=AAX15_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02295 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 37832 38719 . - 0 ID=cds-KKZ56275.1;Parent=gene-AAX15_02295;Dbxref=NCBI_GP:KKZ56275.1;Name=KKZ56275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638468.1;locus_tag=AAX15_02295;product=hypothetical protein;protein_id=KKZ56275.1;transl_table=11 GCA_001008275.1|LCTH01000017.1 Genbank gene 38938 39120 . + . ID=gene-AAX15_02300;Name=AAX15_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02300 GCA_001008275.1|LCTH01000017.1 Protein Homology CDS 38938 39120 . + 0 ID=cds-KKZ56276.1;Parent=gene-AAX15_02300;Dbxref=NCBI_GP:KKZ56276.1;Name=KKZ56276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005616466.1;locus_tag=AAX15_02300;product=hypothetical protein;protein_id=KKZ56276.1;transl_table=11 ##sequence-region LCTH01000018.1 1 95227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000018.1 Genbank region 1 95227 . + . ID=LCTH01000018.1:1..95227;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000018.1 Genbank gene 382 2148 . + . ID=gene-AAX15_02305;Name=AAX15_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02305 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 382 2148 . + 0 ID=cds-KKZ56081.1;Parent=gene-AAX15_02305;Dbxref=NCBI_GP:KKZ56081.1;Name=KKZ56081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526536.1;locus_tag=AAX15_02305;product=KAP family P-loop domain protein;protein_id=KKZ56081.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 2152 2892 . + . ID=gene-AAX15_02310;Name=AAX15_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02310 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 2152 2892 . + 0 ID=cds-KKZ56082.1;Parent=gene-AAX15_02310;Dbxref=NCBI_GP:KKZ56082.1;Name=KKZ56082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526534.1;locus_tag=AAX15_02310;product=hypothetical protein;protein_id=KKZ56082.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 2892 4208 . + . ID=gene-AAX15_02315;Name=AAX15_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02315 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 2892 4208 . + 0 ID=cds-KKZ56083.1;Parent=gene-AAX15_02315;Dbxref=NCBI_GP:KKZ56083.1;Name=KKZ56083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704471.1;locus_tag=AAX15_02315;product=DNA-binding protein;protein_id=KKZ56083.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 4205 4936 . + . ID=gene-AAX15_02320;Name=AAX15_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02320 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 4205 4936 . + 0 ID=cds-KKZ56084.1;Parent=gene-AAX15_02320;Dbxref=NCBI_GP:KKZ56084.1;Name=KKZ56084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005701831.1;locus_tag=AAX15_02320;product=hydrolase TatD;protein_id=KKZ56084.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 5160 5666 . - . ID=gene-AAX15_02325;Name=AAX15_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02325 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 5160 5666 . - 0 ID=cds-KKZ56085.1;Parent=gene-AAX15_02325;Dbxref=NCBI_GP:KKZ56085.1;Name=KKZ56085.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631041.1;locus_tag=AAX15_02325;product=single-stranded DNA-binding protein;protein_id=KKZ56085.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 5820 8651 . + . ID=gene-AAX15_02330;Name=AAX15_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02330 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 5820 8651 . + 0 ID=cds-KKZ56086.1;Parent=gene-AAX15_02330;Dbxref=NCBI_GP:KKZ56086.1;Name=KKZ56086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500154.1;locus_tag=AAX15_02330;product=excinuclease ABC subunit A;protein_id=KKZ56086.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 8806 9249 . + . ID=gene-AAX15_02335;Name=AAX15_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02335 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 8806 9249 . + 0 ID=cds-KKZ56087.1;Parent=gene-AAX15_02335;Dbxref=NCBI_GP:KKZ56087.1;Name=KKZ56087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634429.1;locus_tag=AAX15_02335;product=hypothetical protein;protein_id=KKZ56087.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 9434 10525 . + . ID=gene-AAX15_02340;Name=AAX15_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02340 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 9434 10525 . + 0 ID=cds-KKZ56088.1;Parent=gene-AAX15_02340;Dbxref=NCBI_GP:KKZ56088.1;Name=KKZ56088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626733.1;locus_tag=AAX15_02340;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=KKZ56088.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 10870 12018 . + . ID=gene-AAX15_02345;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=AAX15_02345 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 10870 12018 . + 0 ID=cds-KKZ56089.1;Parent=gene-AAX15_02345;Dbxref=NCBI_GP:KKZ56089.1;Name=KKZ56089.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701468.1;locus_tag=AAX15_02345;product=queuine tRNA-ribosyltransferase;protein_id=KKZ56089.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 12083 12601 . + . ID=gene-AAX15_02350;Name=AAX15_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02350 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 12083 12601 . + 0 ID=cds-KKZ56090.1;Parent=gene-AAX15_02350;Dbxref=NCBI_GP:KKZ56090.1;Name=KKZ56090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43971.1;locus_tag=AAX15_02350;product=hypothetical protein;protein_id=KKZ56090.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 12598 12819 . + . ID=gene-AAX15_02355;Name=AAX15_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02355 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 12598 12819 . + 0 ID=cds-KKZ56091.1;Parent=gene-AAX15_02355;Dbxref=NCBI_GP:KKZ56091.1;Name=KKZ56091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44593.1;locus_tag=AAX15_02355;product=hypothetical protein;protein_id=KKZ56091.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 12929 13222 . + . ID=gene-AAX15_02360;Name=AAX15_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02360 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 12929 13222 . + 0 ID=cds-KKZ56092.1;Parent=gene-AAX15_02360;Dbxref=NCBI_GP:KKZ56092.1;Name=KKZ56092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626741.1;locus_tag=AAX15_02360;product=membrane protein;protein_id=KKZ56092.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 13287 15137 . + . ID=gene-AAX15_02365;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AAX15_02365 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 13287 15137 . + 0 ID=cds-KKZ56093.1;Parent=gene-AAX15_02365;Dbxref=NCBI_GP:KKZ56093.1;Name=KKZ56093.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525496.1;locus_tag=AAX15_02365;product=preprotein translocase subunit SecD;protein_id=KKZ56093.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 15148 16122 . + . ID=gene-AAX15_02370;Name=AAX15_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02370 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 15148 16122 . + 0 ID=cds-KKZ56094.1;Parent=gene-AAX15_02370;Dbxref=NCBI_GP:KKZ56094.1;Name=KKZ56094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500145.1;locus_tag=AAX15_02370;product=preprotein translocase subunit SecF;protein_id=KKZ56094.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 16221 17270 . - . ID=gene-AAX15_02375;Name=AAX15_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02375 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 16221 17270 . - 0 ID=cds-KKZ56095.1;Parent=gene-AAX15_02375;Dbxref=NCBI_GP:KKZ56095.1;Name=KKZ56095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500144.1;locus_tag=AAX15_02375;product=permase;protein_id=KKZ56095.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 17348 17698 . + . ID=gene-AAX15_02380;Name=AAX15_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02380 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 17348 17698 . + 0 ID=cds-KKZ56096.1;Parent=gene-AAX15_02380;Dbxref=NCBI_GP:KKZ56096.1;Name=KKZ56096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634412.1;locus_tag=AAX15_02380;product=arsenate reductase;protein_id=KKZ56096.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 17766 18011 . + . ID=gene-AAX15_02385;Name=AAX15_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02385 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 17766 18011 . + 0 ID=cds-KKZ56097.1;Parent=gene-AAX15_02385;Dbxref=NCBI_GP:KKZ56097.1;Name=KKZ56097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500142.1;locus_tag=AAX15_02385;product=Alternative ribosome-rescue factor A;protein_id=KKZ56097.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 18035 18331 . + . ID=gene-AAX15_02390;Name=AAX15_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02390 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 18035 18331 . + 0 ID=cds-KKZ56098.1;Parent=gene-AAX15_02390;Dbxref=NCBI_GP:KKZ56098.1;Name=KKZ56098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631064.1;locus_tag=AAX15_02390;product=dithiol-disulfide isomerase;protein_id=KKZ56098.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 18772 20223 . - . ID=gene-AAX15_02395;Name=AAX15_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02395 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 18772 20223 . - 0 ID=cds-KKZ56099.1;Parent=gene-AAX15_02395;Dbxref=NCBI_GP:KKZ56099.1;Name=KKZ56099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500138.1;locus_tag=AAX15_02395;product=murein transglycosylase;protein_id=KKZ56099.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 20393 22231 . - . ID=gene-AAX15_02400;Name=AAX15_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02400 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 20393 22231 . - 0 ID=cds-KKZ56100.1;Parent=gene-AAX15_02400;Dbxref=NCBI_GP:KKZ56100.1;Name=KKZ56100.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634402.1;locus_tag=AAX15_02400;product=DEAD/DEAH box helicase;protein_id=KKZ56100.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 22352 23296 . - . ID=gene-AAX15_02405;Name=AAX15_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02405 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 22352 23296 . - 0 ID=cds-KKZ56101.1;Parent=gene-AAX15_02405;Dbxref=NCBI_GP:KKZ56101.1;Name=KKZ56101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638902.1;locus_tag=AAX15_02405;product=lipoprotein NlpI-like protein;protein_id=KKZ56101.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 23378 25507 . - . ID=gene-AAX15_02410;Name=AAX15_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02410 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 23378 25507 . - 0 ID=cds-KKZ56102.1;Parent=gene-AAX15_02410;Dbxref=NCBI_GP:KKZ56102.1;Name=KKZ56102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634398.1;locus_tag=AAX15_02410;product=polynucleotide phosphorylase/polyadenylase;protein_id=KKZ56102.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 25781 26623 . + . ID=gene-AAX15_02415;Name=AAX15_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02415 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 25781 26623 . + 0 ID=cds-KKZ56103.1;Parent=gene-AAX15_02415;Dbxref=NCBI_GP:KKZ56103.1;Name=KKZ56103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634396.1;locus_tag=AAX15_02415;product=glycosyl transferase family 8;protein_id=KKZ56103.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 26699 27166 . + . ID=gene-AAX15_02420;Name=AAX15_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02420 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 26699 27166 . + 0 ID=cds-KKZ56104.1;Parent=gene-AAX15_02420;Dbxref=NCBI_GP:KKZ56104.1;Name=KKZ56104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645703.1;locus_tag=AAX15_02420;product=hypothetical protein;protein_id=KKZ56104.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 27219 27440 . - . ID=gene-AAX15_02425;Name=AAX15_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02425 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 27219 27440 . - 0 ID=cds-KKZ56105.1;Parent=gene-AAX15_02425;Dbxref=NCBI_GP:KKZ56105.1;Name=KKZ56105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631077.1;locus_tag=AAX15_02425;product=oxidoreductase;protein_id=KKZ56105.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 27450 28493 . - . ID=gene-AAX15_02430;Name=AAX15_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02430 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 27450 28493 . - 0 ID=cds-KKZ56106.1;Parent=gene-AAX15_02430;Dbxref=NCBI_GP:KKZ56106.1;Name=KKZ56106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700009.1;locus_tag=AAX15_02430;product=sulfur transporter;protein_id=KKZ56106.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 28772 29479 . - . ID=gene-AAX15_02435;Name=AAX15_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02435 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 28772 29479 . - 0 ID=cds-KKZ56107.1;Parent=gene-AAX15_02435;Dbxref=NCBI_GP:KKZ56107.1;Name=KKZ56107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701899.1;locus_tag=AAX15_02435;product=hypothetical protein;protein_id=KKZ56107.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 29670 30302 . + . ID=gene-AAX15_02440;Name=AAX15_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02440 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 29670 30302 . + 0 ID=cds-KKZ56108.1;Parent=gene-AAX15_02440;Dbxref=NCBI_GP:KKZ56108.1;Name=KKZ56108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055267.1;locus_tag=AAX15_02440;product=pyridoxamine 5'-phosphate oxidase;protein_id=KKZ56108.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 30389 32239 . - . ID=gene-AAX15_02445;Name=AAX15_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02445 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 30389 32239 . - 0 ID=cds-KKZ56109.1;Parent=gene-AAX15_02445;Dbxref=NCBI_GP:KKZ56109.1;Name=KKZ56109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648234.1;locus_tag=AAX15_02445;product=GTP-binding protein TypA;protein_id=KKZ56109.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 32473 33891 . + . ID=gene-AAX15_02450;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AAX15_02450 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 32473 33891 . + 0 ID=cds-KKZ56110.1;Parent=gene-AAX15_02450;Dbxref=NCBI_GP:KKZ56110.1;Name=KKZ56110.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701902.1;locus_tag=AAX15_02450;product=glutamine synthetase;protein_id=KKZ56110.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 33978 35030 . + . ID=gene-AAX15_02455;Name=AAX15_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02455 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 33978 35030 . + 0 ID=cds-KKZ56111.1;Parent=gene-AAX15_02455;Dbxref=NCBI_GP:KKZ56111.1;Name=KKZ56111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634376.1;locus_tag=AAX15_02455;product=dTDP-glucose 4%2C6-dehydratase;protein_id=KKZ56111.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 35086 36390 . + . ID=gene-AAX15_02460;Name=AAX15_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02460 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 35086 36390 . + 0 ID=cds-KKZ56112.1;Parent=gene-AAX15_02460;Dbxref=NCBI_GP:KKZ56112.1;Name=KKZ56112.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637152.1;locus_tag=AAX15_02460;product=aminopeptidase B;protein_id=KKZ56112.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 36400 36822 . + . ID=gene-AAX15_02465;Name=AAX15_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02465 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 36400 36822 . + 0 ID=cds-KKZ56113.1;Parent=gene-AAX15_02465;Dbxref=NCBI_GP:KKZ56113.1;Name=KKZ56113.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500122.1;locus_tag=AAX15_02465;product=nucleoside diphosphate kinase;protein_id=KKZ56113.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 36895 38067 . - . ID=gene-AAX15_02470;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=AAX15_02470 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 36895 38067 . - 0 ID=cds-KKZ56114.1;Parent=gene-AAX15_02470;Dbxref=NCBI_GP:KKZ56114.1;Name=KKZ56114.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=EXISTENCE: similar to AA sequence:SwissProt:P44915.1;locus_tag=AAX15_02470;product=GTPase CgtA;protein_id=KKZ56114.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 38095 39015 . - . ID=gene-AAX15_02475;Name=AAX15_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02475 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 38095 39015 . - 0 ID=cds-KKZ56115.1;Parent=gene-AAX15_02475;Dbxref=NCBI_GP:KKZ56115.1;Name=KKZ56115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551024.1;locus_tag=AAX15_02475;product=transporter;protein_id=KKZ56115.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 39096 39353 . - . ID=gene-AAX15_02480;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AAX15_02480 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 39096 39353 . - 0 ID=cds-KKZ56116.1;Parent=gene-AAX15_02480;Dbxref=NCBI_GP:KKZ56116.1;Name=KKZ56116.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I1P7.1;locus_tag=AAX15_02480;product=50S ribosomal protein L27;protein_id=KKZ56116.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 39374 39685 . - . ID=gene-AAX15_02485;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AAX15_02485 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 39374 39685 . - 0 ID=cds-KKZ56117.1;Parent=gene-AAX15_02485;Dbxref=NCBI_GP:KKZ56117.1;Name=KKZ56117.1;gbkey=CDS;gene=rplU;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N3T7.1;locus_tag=AAX15_02485;product=50S ribosomal protein L21;protein_id=KKZ56117.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 39899 40888 . + . ID=gene-AAX15_02490;Name=AAX15_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02490 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 39899 40888 . + 0 ID=cds-KKZ56118.1;Parent=gene-AAX15_02490;Dbxref=NCBI_GP:KKZ56118.1;Name=KKZ56118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44916.1;locus_tag=AAX15_02490;product=octaprenyl diphosphate synthase;protein_id=KKZ56118.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 40938 41675 . + . ID=gene-AAX15_02495;Name=AAX15_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02495 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 40938 41675 . + 0 ID=cds-KKZ56119.1;Parent=gene-AAX15_02495;Dbxref=NCBI_GP:KKZ56119.1;Name=KKZ56119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659068.1;locus_tag=AAX15_02495;product=hypothetical protein;protein_id=KKZ56119.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 41727 42077 . - . ID=gene-AAX15_02500;Name=AAX15_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02500 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 41727 42077 . - 0 ID=cds-KKZ56120.1;Parent=gene-AAX15_02500;Dbxref=NCBI_GP:KKZ56120.1;Name=KKZ56120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44357.2;locus_tag=AAX15_02500;product=50S ribosomal protein L19;protein_id=KKZ56120.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 42114 42854 . - . ID=gene-AAX15_02505;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AAX15_02505 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 42114 42854 . - 0 ID=cds-KKZ56121.1;Parent=gene-AAX15_02505;Dbxref=NCBI_GP:KKZ56121.1;Name=KKZ56121.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626425.1;locus_tag=AAX15_02505;product=tRNA (guanine-N1)-methyltransferase;protein_id=KKZ56121.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 42892 43419 . - . ID=gene-AAX15_02510;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AAX15_02510 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 42892 43419 . - 0 ID=cds-KKZ56122.1;Parent=gene-AAX15_02510;Dbxref=NCBI_GP:KKZ56122.1;Name=KKZ56122.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626427.1;locus_tag=AAX15_02510;product=16S rRNA-processing protein RimM;protein_id=KKZ56122.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 43464 43712 . - . ID=gene-AAX15_02515;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AAX15_02515 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 43464 43712 . - 0 ID=cds-KKZ56123.1;Parent=gene-AAX15_02515;Dbxref=NCBI_GP:KKZ56123.1;Name=KKZ56123.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631105.1;locus_tag=AAX15_02515;product=30S ribosomal protein S16;protein_id=KKZ56123.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 44023 44802 . + . ID=gene-AAX15_02520;Name=AAX15_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02520 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 44023 44802 . + 0 ID=cds-KKZ56124.1;Parent=gene-AAX15_02520;Dbxref=NCBI_GP:KKZ56124.1;Name=KKZ56124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500115.1;locus_tag=AAX15_02520;product=hypothetical protein;protein_id=KKZ56124.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 44827 46632 . + . ID=gene-AAX15_02525;Name=AAX15_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02525 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 44827 46632 . + 0 ID=cds-KKZ56125.1;Parent=gene-AAX15_02525;Dbxref=NCBI_GP:KKZ56125.1;Name=KKZ56125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695389.1;locus_tag=AAX15_02525;product=metallophosphatase;protein_id=KKZ56125.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 46926 47468 . + . ID=gene-AAX15_02530;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AAX15_02530 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 46926 47468 . + 0 ID=cds-KKZ56126.1;Parent=gene-AAX15_02530;Dbxref=NCBI_GP:KKZ56126.1;Name=KKZ56126.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626436.1;locus_tag=AAX15_02530;product=shikimate kinase;protein_id=KKZ56126.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 47488 48576 . + . ID=gene-AAX15_02535;Name=AAX15_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02535 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 47488 48576 . + 0 ID=cds-KKZ56127.1;Parent=gene-AAX15_02535;Dbxref=NCBI_GP:KKZ56127.1;Name=KKZ56127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526563.1;locus_tag=AAX15_02535;product=3-dehydroquinate synthase;protein_id=KKZ56127.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 48578 49438 . + . ID=gene-AAX15_02540;Name=AAX15_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02540 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 48578 49438 . + 0 ID=cds-KKZ56128.1;Parent=gene-AAX15_02540;Dbxref=NCBI_GP:KKZ56128.1;Name=KKZ56128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500112.1;locus_tag=AAX15_02540;product=DNA adenine methylase;protein_id=KKZ56128.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 49460 50050 . - . ID=gene-AAX15_02545;Name=AAX15_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02545 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 49460 50050 . - 0 ID=cds-KKZ56129.1;Parent=gene-AAX15_02545;Dbxref=NCBI_GP:KKZ56129.1;Name=KKZ56129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631118.1;locus_tag=AAX15_02545;product=molybdenum cofactor guanylyltransferase;protein_id=KKZ56129.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 50115 50381 . + . ID=gene-AAX15_02550;Name=AAX15_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02550 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 50115 50381 . + 0 ID=cds-KKZ56130.1;Parent=gene-AAX15_02550;Dbxref=NCBI_GP:KKZ56130.1;Name=KKZ56130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631120.1;locus_tag=AAX15_02550;product=hypothetical protein;protein_id=KKZ56130.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 50394 51011 . + . ID=gene-AAX15_02555;Name=AAX15_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02555 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 50394 51011 . + 0 ID=cds-KKZ56131.1;Parent=gene-AAX15_02555;Dbxref=NCBI_GP:KKZ56131.1;Name=KKZ56131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652464.1;locus_tag=AAX15_02555;product=thiol:disulfide interchange protein;protein_id=KKZ56131.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 51073 51408 . + . ID=gene-AAX15_02560;Name=AAX15_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02560 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 51073 51408 . + 0 ID=cds-KKZ56132.1;Parent=gene-AAX15_02560;Dbxref=NCBI_GP:KKZ56132.1;Name=KKZ56132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639660.1;locus_tag=AAX15_02560;product=hypothetical protein;protein_id=KKZ56132.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 51552 52643 . + . ID=gene-AAX15_02565;Name=AAX15_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02565 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 51552 52643 . + 0 ID=cds-KKZ56133.1;Parent=gene-AAX15_02565;Dbxref=NCBI_GP:KKZ56133.1;Name=KKZ56133.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701887.1;locus_tag=AAX15_02565;product=tRNA (uracil-5-)-methyltransferase;protein_id=KKZ56133.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 52625 53398 . + . ID=gene-AAX15_02570;Name=AAX15_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02570 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 52625 53398 . + 0 ID=cds-KKZ56134.1;Parent=gene-AAX15_02570;Dbxref=NCBI_GP:KKZ56134.1;Name=KKZ56134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645650.1;locus_tag=AAX15_02570;product=DNA polymerase I;protein_id=KKZ56134.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 53392 53826 . + . ID=gene-AAX15_02575;Name=AAX15_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02575 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 53392 53826 . + 0 ID=cds-KKZ56135.1;Parent=gene-AAX15_02575;Dbxref=NCBI_GP:KKZ56135.1;Name=KKZ56135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701889.1;locus_tag=AAX15_02575;product=hypothetical protein;protein_id=KKZ56135.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 53939 54160 . + . ID=gene-AAX15_02580;Name=AAX15_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02580 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 53939 54160 . + 0 ID=cds-KKZ56136.1;Parent=gene-AAX15_02580;Dbxref=NCBI_GP:KKZ56136.1;Name=KKZ56136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500105.1;locus_tag=AAX15_02580;product=hypothetical protein;protein_id=KKZ56136.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 54314 54829 . + . ID=gene-AAX15_02585;Name=AAX15_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02585 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 54314 54829 . + 0 ID=cds-KKZ56137.1;Parent=gene-AAX15_02585;Dbxref=NCBI_GP:KKZ56137.1;Name=KKZ56137.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701890.1;locus_tag=AAX15_02585;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=KKZ56137.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 54826 56214 . + . ID=gene-AAX15_02590;Name=AAX15_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02590 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 54826 56214 . + 0 ID=cds-KKZ56138.1;Parent=gene-AAX15_02590;Dbxref=NCBI_GP:KKZ56138.1;Name=KKZ56138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637187.1;locus_tag=AAX15_02590;product=major facilitator transporter;protein_id=KKZ56138.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 56365 58008 . + . ID=gene-AAX15_02595;Name=AAX15_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02595 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 56365 58008 . + 0 ID=cds-KKZ56139.1;Parent=gene-AAX15_02595;Dbxref=NCBI_GP:KKZ56139.1;Name=KKZ56139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637188.1;locus_tag=AAX15_02595;product=peptide transporter;protein_id=KKZ56139.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 58185 58946 . + . ID=gene-AAX15_02600;Name=AAX15_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02600 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 58185 58946 . + 0 ID=cds-KKZ56140.1;Parent=gene-AAX15_02600;Dbxref=NCBI_GP:KKZ56140.1;Name=KKZ56140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652481.1;locus_tag=AAX15_02600;product=hypothetical protein;protein_id=KKZ56140.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 59062 60366 . - . ID=gene-AAX15_02605;Name=AAX15_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02605 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 59062 60366 . - 0 ID=cds-KKZ56141.1;Parent=gene-AAX15_02605;Dbxref=NCBI_GP:KKZ56141.1;Name=KKZ56141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639643.1;locus_tag=AAX15_02605;product=membrane protein;protein_id=KKZ56141.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 60385 60699 . - . ID=gene-AAX15_02610;Name=AAX15_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02610 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 60385 60699 . - 0 ID=cds-KKZ56142.1;Parent=gene-AAX15_02610;Dbxref=NCBI_GP:KKZ56142.1;Name=KKZ56142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064122.1;locus_tag=AAX15_02610;product=cupin;protein_id=KKZ56142.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 60711 63518 . - . ID=gene-AAX15_02615;Name=AAX15_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02615 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 60711 63518 . - 0 ID=cds-KKZ56143.1;Parent=gene-AAX15_02615;Dbxref=NCBI_GP:KKZ56143.1;Name=KKZ56143.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635538.1;locus_tag=AAX15_02615;product=DNA polymerase I;protein_id=KKZ56143.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 63667 63969 . + . ID=gene-AAX15_02620;Name=AAX15_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02620 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 63667 63969 . + 0 ID=cds-KKZ56144.1;Parent=gene-AAX15_02620;Dbxref=NCBI_GP:KKZ56144.1;Name=KKZ56144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500939.1;locus_tag=AAX15_02620;product=cell division protein ZapA;protein_id=KKZ56144.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 64430 64993 . + . ID=gene-AAX15_02625;Name=AAX15_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02625 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 64430 64993 . + 0 ID=cds-KKZ56145.1;Parent=gene-AAX15_02625;Dbxref=NCBI_GP:KKZ56145.1;Name=KKZ56145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636725.1;locus_tag=AAX15_02625;product=hypothetical protein;protein_id=KKZ56145.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 65122 67692 . + . ID=gene-AAX15_02630;Name=AAX15_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02630 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 65122 67692 . + 0 ID=cds-KKZ56146.1;Parent=gene-AAX15_02630;Dbxref=NCBI_GP:KKZ56146.1;Name=KKZ56146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701896.1;locus_tag=AAX15_02630;product=protein disaggregation chaperone;protein_id=KKZ56146.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 68055 69485 . - . ID=gene-AAX15_02635;Name=AAX15_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02635 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 68055 69485 . - 0 ID=cds-KKZ56147.1;Parent=gene-AAX15_02635;Dbxref=NCBI_GP:KKZ56147.1;Name=KKZ56147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005596534.1;locus_tag=AAX15_02635;product=hypothetical protein;protein_id=KKZ56147.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 69669 71462 . - . ID=gene-AAX15_02640;Name=AAX15_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02640 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 69669 71462 . - 0 ID=cds-KKZ56148.1;Parent=gene-AAX15_02640;Dbxref=NCBI_GP:KKZ56148.1;Name=KKZ56148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006252223.1;locus_tag=AAX15_02640;product=hypothetical protein;protein_id=KKZ56148.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 71845 72162 . + . ID=gene-AAX15_02645;Name=AAX15_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02645 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 71845 72162 . + 0 ID=cds-KKZ56149.1;Parent=gene-AAX15_02645;Dbxref=NCBI_GP:KKZ56149.1;Name=KKZ56149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639631.1;locus_tag=AAX15_02645;product=hypothetical protein;protein_id=KKZ56149.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 72481 73647 . - . ID=gene-AAX15_02650;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AAX15_02650 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 72481 73647 . - 0 ID=cds-KKZ56150.1;Parent=gene-AAX15_02650;Dbxref=NCBI_GP:KKZ56150.1;Name=KKZ56150.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639629.1;locus_tag=AAX15_02650;product=pH-dependent sodium/proton antiporter;protein_id=KKZ56150.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 73872 75182 . + . ID=gene-AAX15_02655;Name=AAX15_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02655 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 73872 75182 . + 0 ID=cds-KKZ56161.1;Parent=gene-AAX15_02655;Dbxref=NCBI_GP:KKZ56161.1;Name=KKZ56161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500947.1;locus_tag=AAX15_02655;product=branched-chain amino acid transporter;protein_id=KKZ56161.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Protein Homology pseudogene 75379 79896 . - . ID=gene-AAX15_02660;Name=AAX15_02660;Note=disrupted;description=peptidase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_02660;pseudo=true GCA_001008275.1|LCTH01000018.1 Genbank gene 80104 81993 . - . ID=gene-AAX15_02665;Name=AAX15_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02665 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 80104 81993 . - 0 ID=cds-KKZ56151.1;Parent=gene-AAX15_02665;Dbxref=NCBI_GP:KKZ56151.1;Name=KKZ56151.1;Note=catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635552.1;locus_tag=AAX15_02665;product=glutathionylspermidine synthase;protein_id=KKZ56151.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 82221 83279 . + . ID=gene-AAX15_02670;Name=AAX15_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02670 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 82221 83279 . + 0 ID=cds-KKZ56152.1;Parent=gene-AAX15_02670;Dbxref=NCBI_GP:KKZ56152.1;Name=KKZ56152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500944.1;locus_tag=AAX15_02670;product=membrane protein;protein_id=KKZ56152.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 83430 83846 . - . ID=gene-AAX15_02675;Name=AAX15_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02675 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 83430 83846 . - 0 ID=cds-KKZ56162.1;Parent=gene-AAX15_02675;Dbxref=NCBI_GP:KKZ56162.1;Name=KKZ56162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663733.1;locus_tag=AAX15_02675;product=hypothetical protein;protein_id=KKZ56162.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 85098 87446 . + . ID=gene-AAX15_02680;Name=AAX15_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02680 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 85098 87446 . + 0 ID=cds-KKZ56153.1;Parent=gene-AAX15_02680;Dbxref=NCBI_GP:KKZ56153.1;Name=KKZ56153.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689121.1;locus_tag=AAX15_02680;product=exoribonuclease R;protein_id=KKZ56153.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 87502 88242 . + . ID=gene-AAX15_02685;Name=AAX15_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02685 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 87502 88242 . + 0 ID=cds-KKZ56154.1;Parent=gene-AAX15_02685;Dbxref=NCBI_GP:KKZ56154.1;Name=KKZ56154.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690506.1;locus_tag=AAX15_02685;product=23S rRNA methyltransferase;protein_id=KKZ56154.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 88403 88864 . - . ID=gene-AAX15_02690;Name=AAX15_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02690 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 88403 88864 . - 0 ID=cds-KKZ56155.1;Parent=gene-AAX15_02690;Dbxref=NCBI_GP:KKZ56155.1;Name=KKZ56155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648788.1;locus_tag=AAX15_02690;product=AsnC family transcriptional regulator;protein_id=KKZ56155.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 88983 89873 . + . ID=gene-AAX15_02695;Name=AAX15_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02695 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 88983 89873 . + 0 ID=cds-KKZ56156.1;Parent=gene-AAX15_02695;Dbxref=NCBI_GP:KKZ56156.1;Name=KKZ56156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701460.1;locus_tag=AAX15_02695;product=transporter;protein_id=KKZ56156.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 90015 91586 . - . ID=gene-AAX15_02700;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AAX15_02700 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 90015 91586 . - 0 ID=cds-KKZ56157.1;Parent=gene-AAX15_02700;Dbxref=NCBI_GP:KKZ56157.1;Name=KKZ56157.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550523.1;locus_tag=AAX15_02700;product=GMP synthase;protein_id=KKZ56157.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 91685 92632 . - . ID=gene-AAX15_02705;Name=AAX15_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02705 GCA_001008275.1|LCTH01000018.1 GeneMarkS+ CDS 91685 92632 . - 0 ID=cds-KKZ56158.1;Parent=gene-AAX15_02705;Dbxref=NCBI_GP:KKZ56158.1;Name=KKZ56158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_02705;product=hypothetical protein;protein_id=KKZ56158.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 92687 94153 . - . ID=gene-AAX15_02710;Name=AAX15_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02710 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 92687 94153 . - 0 ID=cds-KKZ56159.1;Parent=gene-AAX15_02710;Dbxref=NCBI_GP:KKZ56159.1;Name=KKZ56159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44334.1;locus_tag=AAX15_02710;product=inosine-5-monophosphate dehydrogenase;protein_id=KKZ56159.1;transl_table=11 GCA_001008275.1|LCTH01000018.1 Genbank gene 94277 95185 . + . ID=gene-AAX15_02715;Name=AAX15_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02715 GCA_001008275.1|LCTH01000018.1 Protein Homology CDS 94277 95185 . + 0 ID=cds-KKZ56160.1;Parent=gene-AAX15_02715;Dbxref=NCBI_GP:KKZ56160.1;Name=KKZ56160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629422.1;locus_tag=AAX15_02715;product=acetyl-COA carboxylase;protein_id=KKZ56160.1;transl_table=11 ##sequence-region LCTH01000019.1 1 2508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000019.1 Genbank region 1 2508 . + . ID=LCTH01000019.1:1..2508;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000019.1 Genbank gene 57 1520 . - . ID=gene-AAX15_02720;Name=AAX15_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02720 GCA_001008275.1|LCTH01000019.1 Protein Homology CDS 57 1520 . - 0 ID=cds-KKZ55927.1;Parent=gene-AAX15_02720;Dbxref=NCBI_GP:KKZ55927.1;Name=KKZ55927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636108.1;locus_tag=AAX15_02720;product=potassium transporter;protein_id=KKZ55927.1;transl_table=11 GCA_001008275.1|LCTH01000019.1 Genbank gene 1523 2143 . - . ID=gene-AAX15_02725;Name=AAX15_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02725 GCA_001008275.1|LCTH01000019.1 Protein Homology CDS 1523 2143 . - 0 ID=cds-KKZ55928.1;Parent=gene-AAX15_02725;Dbxref=NCBI_GP:KKZ55928.1;Name=KKZ55928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636613.1;locus_tag=AAX15_02725;product=IMPACT family member;protein_id=KKZ55928.1;transl_table=11 GCA_001008275.1|LCTH01000019.1 Genbank gene 2259 2498 . + . ID=gene-AAX15_02730;Name=AAX15_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02730 GCA_001008275.1|LCTH01000019.1 Protein Homology CDS 2259 2498 . + 0 ID=cds-KKZ55929.1;Parent=gene-AAX15_02730;Dbxref=NCBI_GP:KKZ55929.1;Name=KKZ55929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630802.1;locus_tag=AAX15_02730;product=sulfurtransferase;protein_id=KKZ55929.1;transl_table=11 ##sequence-region LCTH01000020.1 1 12138 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000020.1 Genbank region 1 12138 . + . ID=LCTH01000020.1:1..12138;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000020.1 Genbank gene 14 1384 . - . ID=gene-AAX15_02735;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AAX15_02735 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 14 1384 . - 0 ID=cds-KKZ55864.1;Parent=gene-AAX15_02735;Dbxref=NCBI_GP:KKZ55864.1;Name=KKZ55864.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644122.1;locus_tag=AAX15_02735;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=KKZ55864.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 1543 1914 . - . ID=gene-AAX15_02740;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AAX15_02740 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 1543 1914 . - 0 ID=cds-KKZ55865.1;Parent=gene-AAX15_02740;Dbxref=NCBI_GP:KKZ55865.1;Name=KKZ55865.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644059.1;locus_tag=AAX15_02740;product=50S ribosomal protein L7/L12;protein_id=KKZ55865.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 1969 2460 . - . ID=gene-AAX15_02745;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AAX15_02745 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 1969 2460 . - 0 ID=cds-KKZ55866.1;Parent=gene-AAX15_02745;Dbxref=NCBI_GP:KKZ55866.1;Name=KKZ55866.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694693.1;locus_tag=AAX15_02745;product=50S ribosomal protein L10;protein_id=KKZ55866.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 2732 4102 . - . ID=gene-AAX15_02750;Name=AAX15_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02750 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 2732 4102 . - 0 ID=cds-KKZ55867.1;Parent=gene-AAX15_02750;Dbxref=NCBI_GP:KKZ55867.1;Name=KKZ55867.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654504.1;locus_tag=AAX15_02750;product=adenylosuccinate lyase;protein_id=KKZ55867.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 4125 4742 . - . ID=gene-AAX15_02755;Name=AAX15_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02755 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 4125 4742 . - 0 ID=cds-KKZ55868.1;Parent=gene-AAX15_02755;Dbxref=NCBI_GP:KKZ55868.1;Name=KKZ55868.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701780.1;locus_tag=AAX15_02755;product=lysogenization regulator;protein_id=KKZ55868.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 4871 5875 . + . ID=gene-AAX15_02760;Name=AAX15_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02760 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 4871 5875 . + 0 ID=cds-KKZ55869.1;Parent=gene-AAX15_02760;Dbxref=NCBI_GP:KKZ55869.1;Name=KKZ55869.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692687.1;locus_tag=AAX15_02760;product=tryptophan--tRNA ligase;protein_id=KKZ55869.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 5897 6187 . + . ID=gene-AAX15_02765;Name=AAX15_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02765 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 5897 6187 . + 0 ID=cds-KKZ55870.1;Parent=gene-AAX15_02765;Dbxref=NCBI_GP:KKZ55870.1;Name=KKZ55870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44027.1;locus_tag=AAX15_02765;product=hypothetical protein;protein_id=KKZ55870.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 6236 7225 . - . ID=gene-AAX15_02770;Name=AAX15_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02770 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 6236 7225 . - 0 ID=cds-KKZ55871.1;Parent=gene-AAX15_02770;Dbxref=NCBI_GP:KKZ55871.1;Name=KKZ55871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658697.1;locus_tag=AAX15_02770;product=tRNA-dihydrouridine synthase A;protein_id=KKZ55871.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 7228 8613 . - . ID=gene-AAX15_02775;Name=AAX15_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02775 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 7228 8613 . - 0 ID=cds-KKZ55872.1;Parent=gene-AAX15_02775;Dbxref=NCBI_GP:KKZ55872.1;Name=KKZ55872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644105.1;locus_tag=AAX15_02775;product=chloride channel protein EriC;protein_id=KKZ55872.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 8887 9261 . + . ID=gene-AAX15_02780;Name=AAX15_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02780 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 8887 9261 . + 0 ID=cds-KKZ55873.1;Parent=gene-AAX15_02780;Dbxref=NCBI_GP:KKZ55873.1;Name=KKZ55873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0KQ98.1;locus_tag=AAX15_02780;product=30S ribosomal protein S12;protein_id=KKZ55873.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 9419 9889 . + . ID=gene-AAX15_02785;Name=AAX15_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02785 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 9419 9889 . + 0 ID=cds-KKZ55874.1;Parent=gene-AAX15_02785;Dbxref=NCBI_GP:KKZ55874.1;Name=KKZ55874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526570.1;locus_tag=AAX15_02785;product=30S ribosomal protein S7;protein_id=KKZ55874.1;transl_table=11 GCA_001008275.1|LCTH01000020.1 Genbank gene 9973 12075 . + . ID=gene-AAX15_02790;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AAX15_02790 GCA_001008275.1|LCTH01000020.1 Protein Homology CDS 9973 12075 . + 0 ID=cds-KKZ55875.1;Parent=gene-AAX15_02790;Dbxref=NCBI_GP:KKZ55875.1;Name=KKZ55875.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243488.1;locus_tag=AAX15_02790;product=elongation factor G;protein_id=KKZ55875.1;transl_table=11 ##sequence-region LCTH01000021.1 1 7498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000021.1 Genbank region 1 7498 . + . ID=LCTH01000021.1:1..7498;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000021.1 Genbank gene 1 81 . + . ID=gene-AAX15_02795;Name=AAX15_02795;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_02795;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000021.1 Genbank rRNA 1 81 . + . ID=rna-AAX15_02795;Parent=gene-AAX15_02795;gbkey=rRNA;locus_tag=AAX15_02795;partial=true;product=23S ribosomal RNA;start_range=.,1 GCA_001008275.1|LCTH01000021.1 Genbank exon 1 81 . + . ID=exon-AAX15_02795-1;Parent=rna-AAX15_02795;gbkey=rRNA;locus_tag=AAX15_02795;partial=true;product=23S ribosomal RNA;start_range=.,1 GCA_001008275.1|LCTH01000021.1 Genbank gene 217 332 . + . ID=gene-AAX15_02800;Name=AAX15_02800;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_02800 GCA_001008275.1|LCTH01000021.1 cmsearch rRNA 217 332 . + . ID=rna-AAX15_02800;Parent=gene-AAX15_02800;gbkey=rRNA;locus_tag=AAX15_02800;product=5S ribosomal RNA GCA_001008275.1|LCTH01000021.1 cmsearch exon 217 332 . + . ID=exon-AAX15_02800-1;Parent=rna-AAX15_02800;gbkey=rRNA;locus_tag=AAX15_02800;product=5S ribosomal RNA GCA_001008275.1|LCTH01000021.1 Genbank gene 542 1129 . + . ID=gene-AAX15_02805;Name=AAX15_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02805 GCA_001008275.1|LCTH01000021.1 Protein Homology CDS 542 1129 . + 0 ID=cds-KKZ55816.1;Parent=gene-AAX15_02805;Dbxref=NCBI_GP:KKZ55816.1;Name=KKZ55816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658464.1;locus_tag=AAX15_02805;product=uracil-DNA glycosylase;protein_id=KKZ55816.1;transl_table=11 GCA_001008275.1|LCTH01000021.1 Genbank gene 1242 3047 . + . ID=gene-AAX15_02810;Name=AAX15_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02810 GCA_001008275.1|LCTH01000021.1 Protein Homology CDS 1242 3047 . + 0 ID=cds-KKZ55817.1;Parent=gene-AAX15_02810;Dbxref=NCBI_GP:KKZ55817.1;Name=KKZ55817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646579.1;locus_tag=AAX15_02810;product=ATPase;protein_id=KKZ55817.1;transl_table=11 GCA_001008275.1|LCTH01000021.1 Genbank gene 3142 5184 . - . ID=gene-AAX15_02815;Name=AAX15_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02815 GCA_001008275.1|LCTH01000021.1 Protein Homology CDS 3142 5184 . - 0 ID=cds-KKZ55820.1;Parent=gene-AAX15_02815;Dbxref=NCBI_GP:KKZ55820.1;Name=KKZ55820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627298.1;locus_tag=AAX15_02815;product=oligopeptidase A;protein_id=KKZ55820.1;transl_table=11 GCA_001008275.1|LCTH01000021.1 Genbank gene 5307 5669 . + . ID=gene-AAX15_02820;Name=AAX15_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02820 GCA_001008275.1|LCTH01000021.1 Protein Homology CDS 5307 5669 . + 0 ID=cds-KKZ55818.1;Parent=gene-AAX15_02820;Dbxref=NCBI_GP:KKZ55818.1;Name=KKZ55818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648761.1;locus_tag=AAX15_02820;product=membrane protein;protein_id=KKZ55818.1;transl_table=11 GCA_001008275.1|LCTH01000021.1 Genbank gene 5662 7203 . + . ID=gene-AAX15_02825;Name=AAX15_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02825 GCA_001008275.1|LCTH01000021.1 Protein Homology CDS 5662 7203 . + 0 ID=cds-KKZ55819.1;Parent=gene-AAX15_02825;Dbxref=NCBI_GP:KKZ55819.1;Name=KKZ55819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638777.1;locus_tag=AAX15_02825;product=hypothetical protein;protein_id=KKZ55819.1;transl_table=11 ##sequence-region LCTH01000022.1 1 120442 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000022.1 Genbank region 1 120442 . + . ID=LCTH01000022.1:1..120442;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000022.1 Genbank gene 1 552 . - . ID=gene-AAX15_02830;Name=AAX15_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02830;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 1 552 . - 0 ID=cds-KKZ55684.1;Parent=gene-AAX15_02830;Dbxref=NCBI_GP:KKZ55684.1;Name=KKZ55684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44371.4;locus_tag=AAX15_02830;partial=true;product=30S ribosomal protein S2;protein_id=KKZ55684.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 730 1494 . - . ID=gene-AAX15_02835;Name=AAX15_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02835 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 730 1494 . - 0 ID=cds-KKZ55685.1;Parent=gene-AAX15_02835;Dbxref=NCBI_GP:KKZ55685.1;Name=KKZ55685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631247.1;locus_tag=AAX15_02835;product=hypothetical protein;protein_id=KKZ55685.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 2170 2493 . - . ID=gene-AAX15_02840;Name=AAX15_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02840 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 2170 2493 . - 0 ID=cds-KKZ55686.1;Parent=gene-AAX15_02840;Dbxref=NCBI_GP:KKZ55686.1;Name=KKZ55686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499739.1;locus_tag=AAX15_02840;product=ribosome-associated inhibitor A;protein_id=KKZ55686.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 2727 4097 . - . ID=gene-AAX15_02845;Name=AAX15_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02845 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 2727 4097 . - 0 ID=cds-KKZ55687.1;Parent=gene-AAX15_02845;Dbxref=NCBI_GP:KKZ55687.1;Name=KKZ55687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499740.1;locus_tag=AAX15_02845;product=sodium:alanine symporter;protein_id=KKZ55687.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 cmsearch binding_site 4209 4319 . - . ID=id-LCTH01000022.1:4209..4319;Note=glycine riboswitch;bound_moiety=glycine;gbkey=misc_binding GCA_001008275.1|LCTH01000022.1 Genbank gene 4518 5228 . - . ID=gene-AAX15_02850;Name=AAX15_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02850 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 4518 5228 . - 0 ID=cds-KKZ55688.1;Parent=gene-AAX15_02850;Dbxref=NCBI_GP:KKZ55688.1;Name=KKZ55688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690537.1;locus_tag=AAX15_02850;product=TorR family transcriptional regulator;protein_id=KKZ55688.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 5419 7158 . + . ID=gene-AAX15_02855;Name=AAX15_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02855 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 5419 7158 . + 0 ID=cds-KKZ55689.1;Parent=gene-AAX15_02855;Dbxref=NCBI_GP:KKZ55689.1;Name=KKZ55689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499741.1;locus_tag=AAX15_02855;product=thiol:disulfide interchange protein;protein_id=KKZ55689.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 7270 7674 . + . ID=gene-AAX15_02860;Name=AAX15_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02860 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 7270 7674 . + 0 ID=cds-KKZ55690.1;Parent=gene-AAX15_02860;Dbxref=NCBI_GP:KKZ55690.1;Name=KKZ55690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627545.1;locus_tag=AAX15_02860;product=hypothetical protein;protein_id=KKZ55690.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 7856 9454 . + . ID=gene-AAX15_02865;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AAX15_02865 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 7856 9454 . + 0 ID=cds-KKZ55691.1;Parent=gene-AAX15_02865;Dbxref=NCBI_GP:KKZ55691.1;Name=KKZ55691.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064110.1;locus_tag=AAX15_02865;product=phosphoribosylaminoimidazolecarboxamide formyltransferase;protein_id=KKZ55691.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 9635 10924 . + . ID=gene-AAX15_02870;Name=AAX15_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02870 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 9635 10924 . + 0 ID=cds-KKZ55692.1;Parent=gene-AAX15_02870;Dbxref=NCBI_GP:KKZ55692.1;Name=KKZ55692.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499744.1;locus_tag=AAX15_02870;product=phosphoribosylamine--glycine ligase;protein_id=KKZ55692.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 11049 12314 . + . ID=gene-AAX15_02875;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AAX15_02875 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 11049 12314 . + 0 ID=cds-KKZ55693.1;Parent=gene-AAX15_02875;Dbxref=NCBI_GP:KKZ55693.1;Name=KKZ55693.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631268.1;locus_tag=AAX15_02875;product=serine hydroxymethyltransferase;protein_id=KKZ55693.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 12311 12607 . + . ID=gene-AAX15_02880;Name=AAX15_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02880 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 12311 12607 . + 0 ID=cds-KKZ55694.1;Parent=gene-AAX15_02880;Dbxref=NCBI_GP:KKZ55694.1;Name=KKZ55694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627552.1;locus_tag=AAX15_02880;product=membrane protein;protein_id=KKZ55694.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 12715 13335 . + . ID=gene-AAX15_02885;Name=AAX15_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02885 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 12715 13335 . + 0 ID=cds-KKZ55802.1;Parent=gene-AAX15_02885;Dbxref=NCBI_GP:KKZ55802.1;Name=KKZ55802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM18.2;locus_tag=AAX15_02885;product=dephospho-CoA kinase;protein_id=KKZ55802.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 13328 13534 . + . ID=gene-AAX15_02890;Name=AAX15_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02890 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 13328 13534 . + 0 ID=cds-KKZ55695.1;Parent=gene-AAX15_02890;Dbxref=NCBI_GP:KKZ55695.1;Name=KKZ55695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634195.1;locus_tag=AAX15_02890;product=DNA gyrase inhibitor;protein_id=KKZ55695.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 13651 14898 . + . ID=gene-AAX15_02895;Name=AAX15_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02895 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 13651 14898 . + 0 ID=cds-KKZ55696.1;Parent=gene-AAX15_02895;Dbxref=NCBI_GP:KKZ55696.1;Name=KKZ55696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634194.1;locus_tag=AAX15_02895;product=RNA helicase;protein_id=KKZ55696.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 14942 15958 . + . ID=gene-AAX15_02900;Name=AAX15_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02900 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 14942 15958 . + 0 ID=cds-KKZ55697.1;Parent=gene-AAX15_02900;Dbxref=NCBI_GP:KKZ55697.1;Name=KKZ55697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P24325.2;locus_tag=AAX15_02900;product=UDP-glucose 4-epimerase;protein_id=KKZ55697.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 16141 17379 . + . ID=gene-AAX15_02905;Name=AAX15_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02905 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 16141 17379 . + 0 ID=cds-KKZ55698.1;Parent=gene-AAX15_02905;Dbxref=NCBI_GP:KKZ55698.1;Name=KKZ55698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499751.1;locus_tag=AAX15_02905;product=hypothetical protein;protein_id=KKZ55698.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 17464 18108 . + . ID=gene-AAX15_02910;Name=AAX15_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02910 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 17464 18108 . + 0 ID=cds-KKZ55699.1;Parent=gene-AAX15_02910;Dbxref=NCBI_GP:KKZ55699.1;Name=KKZ55699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760097.1;locus_tag=AAX15_02910;product=adenylate kinase;protein_id=KKZ55699.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 18176 21256 . - . ID=gene-AAX15_02915;Name=AAX15_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02915 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 18176 21256 . - 0 ID=cds-KKZ55700.1;Parent=gene-AAX15_02915;Dbxref=NCBI_GP:KKZ55700.1;Name=KKZ55700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499753.1;locus_tag=AAX15_02915;product=transporter;protein_id=KKZ55700.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 21274 22470 . - . ID=gene-AAX15_02920;Name=AAX15_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02920 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 21274 22470 . - 0 ID=cds-KKZ55701.1;Parent=gene-AAX15_02920;Dbxref=NCBI_GP:KKZ55701.1;Name=KKZ55701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499754.1;locus_tag=AAX15_02920;product=membrane protein;protein_id=KKZ55701.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 22501 23064 . - . ID=gene-AAX15_02925;Name=AAX15_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02925 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 22501 23064 . - 0 ID=cds-KKZ55702.1;Parent=gene-AAX15_02925;Dbxref=NCBI_GP:KKZ55702.1;Name=KKZ55702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625983.1;locus_tag=AAX15_02925;product=TetR family transcriptional regulator;protein_id=KKZ55702.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 23261 24253 . - . ID=gene-AAX15_02930;Name=AAX15_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02930 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 23261 24253 . - 0 ID=cds-KKZ55703.1;Parent=gene-AAX15_02930;Dbxref=NCBI_GP:KKZ55703.1;Name=KKZ55703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648312.1;locus_tag=AAX15_02930;product=hypothetical protein;protein_id=KKZ55703.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 24451 26208 . - . ID=gene-AAX15_02935;Name=AAX15_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02935 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 24451 26208 . - 0 ID=cds-KKZ55704.1;Parent=gene-AAX15_02935;Dbxref=NCBI_GP:KKZ55704.1;Name=KKZ55704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701883.1;locus_tag=AAX15_02935;product=membrane protein;protein_id=KKZ55704.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 26210 26428 . - . ID=gene-AAX15_02940;Name=AAX15_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02940 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 26210 26428 . - 0 ID=cds-KKZ55705.1;Parent=gene-AAX15_02940;Dbxref=NCBI_GP:KKZ55705.1;Name=KKZ55705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM60.1;locus_tag=AAX15_02940;product=hypothetical protein;protein_id=KKZ55705.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 26557 27573 . + . ID=gene-AAX15_02945;Name=AAX15_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02945 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 26557 27573 . + 0 ID=cds-KKZ55706.1;Parent=gene-AAX15_02945;Dbxref=NCBI_GP:KKZ55706.1;Name=KKZ55706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551050.1;locus_tag=AAX15_02945;product=nucleoid-associated protein NdpA;protein_id=KKZ55706.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 27638 28051 . + . ID=gene-AAX15_02950;Name=AAX15_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02950 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 27638 28051 . + 0 ID=cds-KKZ55707.1;Parent=gene-AAX15_02950;Dbxref=NCBI_GP:KKZ55707.1;Name=KKZ55707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645784.1;locus_tag=AAX15_02950;product=membrane protein SmpA;protein_id=KKZ55707.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 28106 28792 . + . ID=gene-AAX15_02955;Name=AAX15_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02955 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 28106 28792 . + 0 ID=cds-KKZ55708.1;Parent=gene-AAX15_02955;Dbxref=NCBI_GP:KKZ55708.1;Name=KKZ55708.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640221.1;locus_tag=AAX15_02955;product=transcriptional regulator;protein_id=KKZ55708.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 28797 30194 . + . ID=gene-AAX15_02960;Name=AAX15_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02960 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 28797 30194 . + 0 ID=cds-KKZ55709.1;Parent=gene-AAX15_02960;Dbxref=NCBI_GP:KKZ55709.1;Name=KKZ55709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640224.1;locus_tag=AAX15_02960;product=histidine kinase;protein_id=KKZ55709.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 30234 31205 . - . ID=gene-AAX15_02965;Name=AAX15_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02965 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 30234 31205 . - 0 ID=cds-KKZ55710.1;Parent=gene-AAX15_02965;Dbxref=NCBI_GP:KKZ55710.1;Name=KKZ55710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDN8.1;locus_tag=AAX15_02965;product=elongation factor P--(R)-beta-lysine ligase;protein_id=KKZ55710.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 31422 33221 . + . ID=gene-AAX15_02970;Name=AAX15_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02970 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 31422 33221 . + 0 ID=cds-KKZ55711.1;Parent=gene-AAX15_02970;Dbxref=NCBI_GP:KKZ55711.1;Name=KKZ55711.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655655.1;locus_tag=AAX15_02970;product=fumarate reductase;protein_id=KKZ55711.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 33214 33984 . + . ID=gene-AAX15_02975;Name=AAX15_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02975 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 33214 33984 . + 0 ID=cds-KKZ55712.1;Parent=gene-AAX15_02975;Dbxref=NCBI_GP:KKZ55712.1;Name=KKZ55712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44893.1;locus_tag=AAX15_02975;product=fumarate reductase;protein_id=KKZ55712.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 33995 34405 . + . ID=gene-AAX15_02980;Name=AAX15_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02980 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 33995 34405 . + 0 ID=cds-KKZ55713.1;Parent=gene-AAX15_02980;Dbxref=NCBI_GP:KKZ55713.1;Name=KKZ55713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701880.1;locus_tag=AAX15_02980;product=fumarate reductase;protein_id=KKZ55713.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 34418 34762 . + . ID=gene-AAX15_02985;Name=AAX15_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02985 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 34418 34762 . + 0 ID=cds-KKZ55714.1;Parent=gene-AAX15_02985;Dbxref=NCBI_GP:KKZ55714.1;Name=KKZ55714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44891.1;locus_tag=AAX15_02985;product=fumarate reductase;protein_id=KKZ55714.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 34868 35554 . - . ID=gene-AAX15_02990;Name=AAX15_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02990 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 34868 35554 . - 0 ID=cds-KKZ55715.1;Parent=gene-AAX15_02990;Dbxref=NCBI_GP:KKZ55715.1;Name=KKZ55715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686043.1;locus_tag=AAX15_02990;product=peptidoglycan transglycosylase;protein_id=KKZ55715.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 35594 35899 . - . ID=gene-AAX15_02995;Name=AAX15_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_02995 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 35594 35899 . - 0 ID=cds-KKZ55716.1;Parent=gene-AAX15_02995;Dbxref=NCBI_GP:KKZ55716.1;Name=KKZ55716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663067.1;locus_tag=AAX15_02995;product=Trp operon repressor;protein_id=KKZ55716.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 35937 37718 . - . ID=gene-AAX15_03000;Name=AAX15_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03000 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 35937 37718 . - 0 ID=cds-KKZ55717.1;Parent=gene-AAX15_03000;Dbxref=NCBI_GP:KKZ55717.1;Name=KKZ55717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44888.1;locus_tag=AAX15_03000;product=lytic murein transglycosylase;protein_id=KKZ55717.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 37744 38040 . - . ID=gene-AAX15_03005;Name=AAX15_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03005 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 37744 38040 . - 0 ID=cds-KKZ55718.1;Parent=gene-AAX15_03005;Dbxref=NCBI_GP:KKZ55718.1;Name=KKZ55718.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636808.1;locus_tag=AAX15_03005;product=hypothetical protein;protein_id=KKZ55718.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 38056 38535 . - . ID=gene-AAX15_03010;Name=AAX15_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03010 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 38056 38535 . - 0 ID=cds-KKZ55719.1;Parent=gene-AAX15_03010;Dbxref=NCBI_GP:KKZ55719.1;Name=KKZ55719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633431.1;locus_tag=AAX15_03010;product=acyl-CoA thioester hydrolase;protein_id=KKZ55719.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 38535 39092 . - . ID=gene-AAX15_03015;Name=AAX15_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03015 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 38535 39092 . - 0 ID=cds-KKZ55720.1;Parent=gene-AAX15_03015;Dbxref=NCBI_GP:KKZ55720.1;Name=KKZ55720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690438.1;locus_tag=AAX15_03015;product=septation protein A;protein_id=KKZ55720.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 39098 39832 . - . ID=gene-AAX15_03020;Name=AAX15_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03020 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 39098 39832 . - 0 ID=cds-KKZ55721.1;Parent=gene-AAX15_03020;Dbxref=NCBI_GP:KKZ55721.1;Name=KKZ55721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551056.1;locus_tag=AAX15_03020;product=hypothetical protein;protein_id=KKZ55721.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 39993 41003 . - . ID=gene-AAX15_03025;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AAX15_03025 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 39993 41003 . - 0 ID=cds-KKZ55722.1;Parent=gene-AAX15_03025;Dbxref=NCBI_GP:KKZ55722.1;Name=KKZ55722.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355241.1;locus_tag=AAX15_03025;product=beta-methylgalactoside transporter permease;protein_id=KKZ55722.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 41022 42542 . - . ID=gene-AAX15_03030;Name=AAX15_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03030 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 41022 42542 . - 0 ID=cds-KKZ55723.1;Parent=gene-AAX15_03030;Dbxref=NCBI_GP:KKZ55723.1;Name=KKZ55723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636816.1;locus_tag=AAX15_03030;product=sugar ABC transporter ATP-binding protein;protein_id=KKZ55723.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 42608 43603 . - . ID=gene-AAX15_03035;Name=AAX15_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03035 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 42608 43603 . - 0 ID=cds-KKZ55724.1;Parent=gene-AAX15_03035;Dbxref=NCBI_GP:KKZ55724.1;Name=KKZ55724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701875.1;locus_tag=AAX15_03035;product=sugar ABC transporter substrate-binding protein;protein_id=KKZ55724.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 43790 44788 . - . ID=gene-AAX15_03040;Name=AAX15_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03040 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 43790 44788 . - 0 ID=cds-KKZ55725.1;Parent=gene-AAX15_03040;Dbxref=NCBI_GP:KKZ55725.1;Name=KKZ55725.1;Note=controls transcription of galETKM;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499773.1;locus_tag=AAX15_03040;product=transcriptional regulator;protein_id=KKZ55725.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 45000 46043 . + . ID=gene-AAX15_03045;Name=AAX15_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03045 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 45000 46043 . + 0 ID=cds-KKZ55726.1;Parent=gene-AAX15_03045;Dbxref=NCBI_GP:KKZ55726.1;Name=KKZ55726.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628320.1;locus_tag=AAX15_03045;product=galactose-1-phosphate uridylyltransferase;protein_id=KKZ55726.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 46114 47268 . + . ID=gene-AAX15_03050;Name=AAX15_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03050 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 46114 47268 . + 0 ID=cds-KKZ55727.1;Parent=gene-AAX15_03050;Dbxref=NCBI_GP:KKZ55727.1;Name=KKZ55727.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDQ5.1;locus_tag=AAX15_03050;product=galactokinase;protein_id=KKZ55727.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 47278 48300 . + . ID=gene-AAX15_03055;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AAX15_03055 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 47278 48300 . + 0 ID=cds-KKZ55728.1;Parent=gene-AAX15_03055;Dbxref=NCBI_GP:KKZ55728.1;Name=KKZ55728.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628324.1;locus_tag=AAX15_03055;product=galactose-1-epimerase;protein_id=KKZ55728.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 48428 49327 . + . ID=gene-AAX15_03060;Name=AAX15_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03060 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 48428 49327 . + 0 ID=cds-KKZ55729.1;Parent=gene-AAX15_03060;Dbxref=NCBI_GP:KKZ55729.1;Name=KKZ55729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499777.1;locus_tag=AAX15_03060;product=magnesium transporter;protein_id=KKZ55729.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 49429 50988 . + . ID=gene-AAX15_03065;Name=AAX15_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03065 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 49429 50988 . + 0 ID=cds-KKZ55730.1;Parent=gene-AAX15_03065;Dbxref=NCBI_GP:KKZ55730.1;Name=KKZ55730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631348.1;locus_tag=AAX15_03065;product=acyltransferase;protein_id=KKZ55730.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 51028 51822 . + . ID=gene-AAX15_03070;Name=AAX15_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03070 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 51028 51822 . + 0 ID=cds-KKZ55731.1;Parent=gene-AAX15_03070;Dbxref=NCBI_GP:KKZ55731.1;Name=KKZ55731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628331.1;locus_tag=AAX15_03070;product=ABC transporter ATP-binding protein;protein_id=KKZ55731.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 51819 52604 . + . ID=gene-AAX15_03075;Name=AAX15_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03075 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 51819 52604 . + 0 ID=cds-KKZ55732.1;Parent=gene-AAX15_03075;Dbxref=NCBI_GP:KKZ55732.1;Name=KKZ55732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651728.1;locus_tag=AAX15_03075;product=ABC transporter permease;protein_id=KKZ55732.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 52614 53120 . + . ID=gene-AAX15_03080;Name=AAX15_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03080 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 52614 53120 . + 0 ID=cds-KKZ55733.1;Parent=gene-AAX15_03080;Dbxref=NCBI_GP:KKZ55733.1;Name=KKZ55733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628338.1;locus_tag=AAX15_03080;product=toluene ABC transporter substrate-binding protein;protein_id=KKZ55733.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 53146 53793 . + . ID=gene-AAX15_03085;Name=AAX15_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03085 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 53146 53793 . + 0 ID=cds-KKZ55734.1;Parent=gene-AAX15_03085;Dbxref=NCBI_GP:KKZ55734.1;Name=KKZ55734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645858.1;locus_tag=AAX15_03085;product=hypothetical protein;protein_id=KKZ55734.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 53804 54130 . + . ID=gene-AAX15_03090;Name=AAX15_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03090 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 53804 54130 . + 0 ID=cds-KKZ55735.1;Parent=gene-AAX15_03090;Dbxref=NCBI_GP:KKZ55735.1;Name=KKZ55735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633402.1;locus_tag=AAX15_03090;product=hypothetical protein;protein_id=KKZ55735.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 54142 54399 . + . ID=gene-AAX15_03095;Name=AAX15_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03095 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 54142 54399 . + 0 ID=cds-KKZ55736.1;Parent=gene-AAX15_03095;Dbxref=NCBI_GP:KKZ55736.1;Name=KKZ55736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636841.1;locus_tag=AAX15_03095;product=hypothetical protein;protein_id=KKZ55736.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 54410 55684 . + . ID=gene-AAX15_03100;Name=AAX15_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03100 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 54410 55684 . + 0 ID=cds-KKZ55737.1;Parent=gene-AAX15_03100;Dbxref=NCBI_GP:KKZ55737.1;Name=KKZ55737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628349.1;locus_tag=AAX15_03100;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=KKZ55737.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 55987 56760 . + . ID=gene-AAX15_03105;Name=AAX15_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03105 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 55987 56760 . + 0 ID=cds-KKZ55738.1;Parent=gene-AAX15_03105;Dbxref=NCBI_GP:KKZ55738.1;Name=KKZ55738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636846.1;locus_tag=AAX15_03105;product=amino acid ABC transporter substrate-binding protein;protein_id=KKZ55738.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 56744 57460 . + . ID=gene-AAX15_03110;Name=AAX15_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03110 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 56744 57460 . + 0 ID=cds-KKZ55739.1;Parent=gene-AAX15_03110;Dbxref=NCBI_GP:KKZ55739.1;Name=KKZ55739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628353.1;locus_tag=AAX15_03110;product=cysteine ABC transporter permease;protein_id=KKZ55739.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 57470 58237 . + . ID=gene-AAX15_03115;Name=AAX15_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03115 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 57470 58237 . + 0 ID=cds-KKZ55740.1;Parent=gene-AAX15_03115;Dbxref=NCBI_GP:KKZ55740.1;Name=KKZ55740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633394.1;locus_tag=AAX15_03115;product=amino acid ABC transporter ATPase;protein_id=KKZ55740.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 58403 59080 . + . ID=gene-AAX15_03120;Name=AAX15_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03120 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 58403 59080 . + 0 ID=cds-KKZ55741.1;Parent=gene-AAX15_03120;Dbxref=NCBI_GP:KKZ55741.1;Name=KKZ55741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636851.1;locus_tag=AAX15_03120;product=nicotinamide riboside transporter pnuC;protein_id=KKZ55741.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 59244 60611 . - . ID=gene-AAX15_03125;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AAX15_03125 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 59244 60611 . - 0 ID=cds-KKZ55742.1;Parent=gene-AAX15_03125;Dbxref=NCBI_GP:KKZ55742.1;Name=KKZ55742.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44704.1;locus_tag=AAX15_03125;product=phosphatidylserine synthase;protein_id=KKZ55742.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 60758 61813 . + . ID=gene-AAX15_03130;Name=AAX15_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03130 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 60758 61813 . + 0 ID=cds-KKZ55743.1;Parent=gene-AAX15_03130;Dbxref=NCBI_GP:KKZ55743.1;Name=KKZ55743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500864.1;locus_tag=AAX15_03130;product=rRNA methyltransferase;protein_id=KKZ55743.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 62064 65156 . + . ID=gene-AAX15_03135;Name=AAX15_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03135 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 62064 65156 . + 0 ID=cds-KKZ55744.1;Parent=gene-AAX15_03135;Dbxref=NCBI_GP:KKZ55744.1;Name=KKZ55744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004523710.1;locus_tag=AAX15_03135;product=hypothetical protein;protein_id=KKZ55744.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 65199 65897 . - . ID=gene-AAX15_03140;Name=AAX15_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03140 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 65199 65897 . - 0 ID=cds-KKZ55745.1;Parent=gene-AAX15_03140;Dbxref=NCBI_GP:KKZ55745.1;Name=KKZ55745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632007.1;locus_tag=AAX15_03140;product=tRNA (adenine-N6)-methyltransferase;protein_id=KKZ55745.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 65967 67292 . + . ID=gene-AAX15_03145;Name=AAX15_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03145 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 65967 67292 . + 0 ID=cds-KKZ55746.1;Parent=gene-AAX15_03145;Dbxref=NCBI_GP:KKZ55746.1;Name=KKZ55746.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636417.1;locus_tag=AAX15_03145;product=ATP-dependent RNA helicase SrmB;protein_id=KKZ55746.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 67411 68319 . - . ID=gene-AAX15_03150;Name=AAX15_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03150 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 67411 68319 . - 0 ID=cds-KKZ55747.1;Parent=gene-AAX15_03150;Dbxref=NCBI_GP:KKZ55747.1;Name=KKZ55747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662977.1;locus_tag=AAX15_03150;product=recombinase RdgC;protein_id=KKZ55747.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 68385 69200 . + . ID=gene-AAX15_03155;Name=AAX15_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03155 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 68385 69200 . + 0 ID=cds-KKZ55748.1;Parent=gene-AAX15_03155;Dbxref=NCBI_GP:KKZ55748.1;Name=KKZ55748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668983.1;locus_tag=AAX15_03155;product=pyrroline-5-carboxylate reductase;protein_id=KKZ55748.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 69200 70366 . + . ID=gene-AAX15_03160;Name=AAX15_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03160 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 69200 70366 . + 0 ID=cds-KKZ55749.1;Parent=gene-AAX15_03160;Dbxref=NCBI_GP:KKZ55749.1;Name=KKZ55749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500869.1;locus_tag=AAX15_03160;product=MFS transporter;protein_id=KKZ55749.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 70397 71290 . + . ID=gene-AAX15_03165;Name=AAX15_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03165 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 70397 71290 . + 0 ID=cds-KKZ55750.1;Parent=gene-AAX15_03165;Dbxref=NCBI_GP:KKZ55750.1;Name=KKZ55750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44630.1;locus_tag=AAX15_03165;product=tyrosine recombinase XerD;protein_id=KKZ55750.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 71477 73114 . + . ID=gene-AAX15_03170;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AAX15_03170 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 71477 73114 . + 0 ID=cds-KKZ55751.1;Parent=gene-AAX15_03170;Dbxref=NCBI_GP:KKZ55751.1;Name=KKZ55751.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500874.1;locus_tag=AAX15_03170;product=CTP synthetase;protein_id=KKZ55751.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 73305 74615 . + . ID=gene-AAX15_03175;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AAX15_03175 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 73305 74615 . + 0 ID=cds-KKZ55752.1;Parent=gene-AAX15_03175;Dbxref=NCBI_GP:KKZ55752.1;Name=KKZ55752.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005542971.1;locus_tag=AAX15_03175;product=enolase;protein_id=KKZ55752.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 74699 75118 . + . ID=gene-AAX15_03180;Name=AAX15_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03180 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 74699 75118 . + 0 ID=cds-KKZ55753.1;Parent=gene-AAX15_03180;Dbxref=NCBI_GP:KKZ55753.1;Name=KKZ55753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627705.1;locus_tag=AAX15_03180;product=hypothetical protein;protein_id=KKZ55753.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 75131 75712 . + . ID=gene-AAX15_03185;Name=AAX15_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03185 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 75131 75712 . + 0 ID=cds-KKZ55754.1;Parent=gene-AAX15_03185;Dbxref=NCBI_GP:KKZ55754.1;Name=KKZ55754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655898.1;locus_tag=AAX15_03185;product=hypothetical protein;protein_id=KKZ55754.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 75713 76894 . + . ID=gene-AAX15_03190;Name=AAX15_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03190 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 75713 76894 . + 0 ID=cds-KKZ55755.1;Parent=gene-AAX15_03190;Dbxref=NCBI_GP:KKZ55755.1;Name=KKZ55755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44940.1;locus_tag=AAX15_03190;product=hypothetical protein;protein_id=KKZ55755.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 77179 78033 . + . ID=gene-AAX15_03195;Name=AAX15_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03195 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 77179 78033 . + 0 ID=cds-KKZ55756.1;Parent=gene-AAX15_03195;Dbxref=NCBI_GP:KKZ55756.1;Name=KKZ55756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627709.1;locus_tag=AAX15_03195;product=formate transporter;protein_id=KKZ55756.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 78082 80394 . + . ID=gene-AAX15_03200;Name=AAX15_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03200 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 78082 80394 . + 0 ID=cds-KKZ55757.1;Parent=gene-AAX15_03200;Dbxref=NCBI_GP:KKZ55757.1;Name=KKZ55757.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639776.1;locus_tag=AAX15_03200;product=pyruvate formate-lyase;protein_id=KKZ55757.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 80477 80767 . + . ID=gene-AAX15_03205;Name=AAX15_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03205 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 80477 80767 . + 0 ID=cds-KKZ55758.1;Parent=gene-AAX15_03205;Dbxref=NCBI_GP:KKZ55758.1;Name=KKZ55758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647085.1;locus_tag=AAX15_03205;product=antibiotic biosynthesis monooxygenase;protein_id=KKZ55758.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 80980 81861 . + . ID=gene-AAX15_03210;Name=AAX15_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03210 GCA_001008275.1|LCTH01000022.1 GeneMarkS+ CDS 80980 81861 . + 0 ID=cds-KKZ55759.1;Parent=gene-AAX15_03210;Dbxref=NCBI_GP:KKZ55759.1;Name=KKZ55759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03210;product=hypothetical protein;protein_id=KKZ55759.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 81875 82615 . + . ID=gene-AAX15_03215;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AAX15_03215 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 81875 82615 . + 0 ID=cds-KKZ55803.1;Parent=gene-AAX15_03215;Dbxref=NCBI_GP:KKZ55803.1;Name=KKZ55803.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635116.1;locus_tag=AAX15_03215;product=pyruvate formate lyase-activating enzyme 1;protein_id=KKZ55803.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 82647 83129 . + . ID=gene-AAX15_03220;Name=AAX15_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03220 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 82647 83129 . + 0 ID=cds-KKZ55760.1;Parent=gene-AAX15_03220;Dbxref=NCBI_GP:KKZ55760.1;Name=KKZ55760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500888.1;locus_tag=AAX15_03220;product=hypothetical protein;protein_id=KKZ55760.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 83176 83709 . - . ID=gene-AAX15_03225;Name=AAX15_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03225 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 83176 83709 . - 0 ID=cds-KKZ55761.1;Parent=gene-AAX15_03225;Dbxref=NCBI_GP:KKZ55761.1;Name=KKZ55761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636460.1;locus_tag=AAX15_03225;product=disulfide bond formation protein DsbB;protein_id=KKZ55761.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 83719 85263 . - . ID=gene-AAX15_03230;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AAX15_03230 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 83719 85263 . - 0 ID=cds-KKZ55762.1;Parent=gene-AAX15_03230;Dbxref=NCBI_GP:KKZ55762.1;Name=KKZ55762.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627718.1;locus_tag=AAX15_03230;product=sodium/proton antiporter;protein_id=KKZ55762.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 85389 86114 . + . ID=gene-AAX15_03235;Name=AAX15_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03235 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 85389 86114 . + 0 ID=cds-KKZ55763.1;Parent=gene-AAX15_03235;Dbxref=NCBI_GP:KKZ55763.1;Name=KKZ55763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636464.1;locus_tag=AAX15_03235;product=fatty acid metabolism regulator protein;protein_id=KKZ55763.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 86176 86913 . + . ID=gene-AAX15_03240;Name=AAX15_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03240 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 86176 86913 . + 0 ID=cds-KKZ55764.1;Parent=gene-AAX15_03240;Dbxref=NCBI_GP:KKZ55764.1;Name=KKZ55764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44627.1;locus_tag=AAX15_03240;product=16S rRNA methyltransferase;protein_id=KKZ55764.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 86910 87470 . + . ID=gene-AAX15_03245;Name=AAX15_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03245 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 86910 87470 . + 0 ID=cds-KKZ55765.1;Parent=gene-AAX15_03245;Dbxref=NCBI_GP:KKZ55765.1;Name=KKZ55765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635128.1;locus_tag=AAX15_03245;product=hypothetical protein;protein_id=KKZ55765.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 87470 87895 . + . ID=gene-AAX15_03250;Name=AAX15_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03250 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 87470 87895 . + 0 ID=cds-KKZ55766.1;Parent=gene-AAX15_03250;Dbxref=NCBI_GP:KKZ55766.1;Name=KKZ55766.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646895.1;locus_tag=AAX15_03250;product=Holliday junction resolvase;protein_id=KKZ55766.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 88037 89416 . - . ID=gene-AAX15_03255;Name=AAX15_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03255 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 88037 89416 . - 0 ID=cds-KKZ55767.1;Parent=gene-AAX15_03255;Dbxref=NCBI_GP:KKZ55767.1;Name=KKZ55767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500894.1;locus_tag=AAX15_03255;product=protease;protein_id=KKZ55767.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 89650 90330 . - . ID=gene-AAX15_03260;Name=AAX15_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03260 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 89650 90330 . - 0 ID=cds-KKZ55768.1;Parent=gene-AAX15_03260;Dbxref=NCBI_GP:KKZ55768.1;Name=KKZ55768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635135.1;locus_tag=AAX15_03260;product=thiamine-phosphate pyrophosphorylase;protein_id=KKZ55768.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 90341 91150 . - . ID=gene-AAX15_03265;Name=AAX15_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03265 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 90341 91150 . - 0 ID=cds-KKZ55769.1;Parent=gene-AAX15_03265;Dbxref=NCBI_GP:KKZ55769.1;Name=KKZ55769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697402.1;locus_tag=AAX15_03265;product=phosphomethylpyrimidine kinase;protein_id=KKZ55769.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 91143 91937 . - . ID=gene-AAX15_03270;Name=AAX15_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03270 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 91143 91937 . - 0 ID=cds-KKZ55770.1;Parent=gene-AAX15_03270;Dbxref=NCBI_GP:KKZ55770.1;Name=KKZ55770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647061.1;locus_tag=AAX15_03270;product=hydroxyethylthiazole kinase;protein_id=KKZ55770.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 91953 92600 . - . ID=gene-AAX15_03275;Name=AAX15_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03275 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 91953 92600 . - 0 ID=cds-KKZ55771.1;Parent=gene-AAX15_03275;Dbxref=NCBI_GP:KKZ55771.1;Name=KKZ55771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500898.1;locus_tag=AAX15_03275;product=hypothetical protein;protein_id=KKZ55771.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 92610 93554 . - . ID=gene-AAX15_03280;Name=AAX15_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03280 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 92610 93554 . - 0 ID=cds-KKZ55772.1;Parent=gene-AAX15_03280;Dbxref=NCBI_GP:KKZ55772.1;Name=KKZ55772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694722.1;locus_tag=AAX15_03280;product=thiamine biosynthesis protein;protein_id=KKZ55772.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 93580 94317 . - . ID=gene-AAX15_03285;Name=AAX15_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03285 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 93580 94317 . - 0 ID=cds-KKZ55773.1;Parent=gene-AAX15_03285;Dbxref=NCBI_GP:KKZ55773.1;Name=KKZ55773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500900.1;locus_tag=AAX15_03285;product=ABC transporter permease;protein_id=KKZ55773.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 94314 95039 . - . ID=gene-AAX15_03290;Name=AAX15_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03290 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 94314 95039 . - 0 ID=cds-KKZ55774.1;Parent=gene-AAX15_03290;Dbxref=NCBI_GP:KKZ55774.1;Name=KKZ55774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500901.1;locus_tag=AAX15_03290;product=phosphonate ABC transporter ATP-binding protein;protein_id=KKZ55774.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 95421 95987 . - . ID=gene-AAX15_03295;Name=AAX15_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03295 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 95421 95987 . - 0 ID=cds-KKZ55775.1;Parent=gene-AAX15_03295;Dbxref=NCBI_GP:KKZ55775.1;Name=KKZ55775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635150.1;locus_tag=AAX15_03295;product=elongation factor P;protein_id=KKZ55775.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 96025 97041 . + . ID=gene-AAX15_03300;Name=AAX15_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03300 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 96025 97041 . + 0 ID=cds-KKZ55776.1;Parent=gene-AAX15_03300;Dbxref=NCBI_GP:KKZ55776.1;Name=KKZ55776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500903.1;locus_tag=AAX15_03300;product=lysine 2%2C3-aminomutase;protein_id=KKZ55776.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 97126 98472 . + . ID=gene-AAX15_03305;Name=AAX15_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03305 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 97126 98472 . + 0 ID=cds-KKZ55777.1;Parent=gene-AAX15_03305;Dbxref=NCBI_GP:KKZ55777.1;Name=KKZ55777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646915.1;locus_tag=AAX15_03305;product=Opacity-associated protein OapA;protein_id=KKZ55777.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 98520 98924 . + . ID=gene-AAX15_03310;Name=AAX15_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03310 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 98520 98924 . + 0 ID=cds-KKZ55778.1;Parent=gene-AAX15_03310;Dbxref=NCBI_GP:KKZ55778.1;Name=KKZ55778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641348.1;locus_tag=AAX15_03310;product=Opacity-associated protein OapB;protein_id=KKZ55778.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 98927 99637 . + . ID=gene-AAX15_03315;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AAX15_03315 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 98927 99637 . + 0 ID=cds-KKZ55779.1;Parent=gene-AAX15_03315;Dbxref=NCBI_GP:KKZ55779.1;Name=KKZ55779.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500906.1;locus_tag=AAX15_03315;product=DNA repair protein RecO;protein_id=KKZ55779.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 99637 100950 . + . ID=gene-AAX15_03320;Name=AAX15_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03320 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 99637 100950 . + 0 ID=cds-KKZ55780.1;Parent=gene-AAX15_03320;Dbxref=NCBI_GP:KKZ55780.1;Name=KKZ55780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996152.1;locus_tag=AAX15_03320;product=23S rRNA methyltransferase;protein_id=KKZ55780.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 101394 101939 . - . ID=gene-AAX15_03325;Name=AAX15_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03325 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 101394 101939 . - 0 ID=cds-KKZ55781.1;Parent=gene-AAX15_03325;Dbxref=NCBI_GP:KKZ55781.1;Name=KKZ55781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639196.1;locus_tag=AAX15_03325;product=membrane protein;protein_id=KKZ55781.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 101939 102886 . - . ID=gene-AAX15_03330;Name=AAX15_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03330 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 101939 102886 . - 0 ID=cds-KKZ55782.1;Parent=gene-AAX15_03330;Dbxref=NCBI_GP:KKZ55782.1;Name=KKZ55782.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012073703.1;locus_tag=AAX15_03330;product=magnesium transporter CorA;protein_id=KKZ55782.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 103379 103990 . + . ID=gene-AAX15_03335;Name=AAX15_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03335 GCA_001008275.1|LCTH01000022.1 GeneMarkS+ CDS 103379 103990 . + 0 ID=cds-KKZ55783.1;Parent=gene-AAX15_03335;Dbxref=NCBI_GP:KKZ55783.1;Name=KKZ55783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03335;product=hypothetical protein;protein_id=KKZ55783.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 104015 104515 . - . ID=gene-AAX15_03340;Name=AAX15_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03340 GCA_001008275.1|LCTH01000022.1 GeneMarkS+ CDS 104015 104515 . - 0 ID=cds-KKZ55784.1;Parent=gene-AAX15_03340;Dbxref=NCBI_GP:KKZ55784.1;Name=KKZ55784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03340;product=hypothetical protein;protein_id=KKZ55784.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 104651 105142 . - . ID=gene-AAX15_03345;Name=AAX15_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03345 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 104651 105142 . - 0 ID=cds-KKZ55785.1;Parent=gene-AAX15_03345;Dbxref=NCBI_GP:KKZ55785.1;Name=KKZ55785.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651339.1;locus_tag=AAX15_03345;product=nucleotide-binding protein;protein_id=KKZ55785.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 105160 106104 . - . ID=gene-AAX15_03350;Name=AAX15_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03350 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 105160 106104 . - 0 ID=cds-KKZ55786.1;Parent=gene-AAX15_03350;Dbxref=NCBI_GP:KKZ55786.1;Name=KKZ55786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500172.1;locus_tag=AAX15_03350;product=phosphoserine phosphatase;protein_id=KKZ55786.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 106161 106799 . + . ID=gene-AAX15_03355;Name=AAX15_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03355 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 106161 106799 . + 0 ID=cds-KKZ55787.1;Parent=gene-AAX15_03355;Dbxref=NCBI_GP:KKZ55787.1;Name=KKZ55787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634461.1;locus_tag=AAX15_03355;product=hemolysin regulation protein AhpA;protein_id=KKZ55787.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 106910 108907 . + . ID=gene-AAX15_03360;Name=AAX15_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03360 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 106910 108907 . + 0 ID=cds-KKZ55788.1;Parent=gene-AAX15_03360;Dbxref=NCBI_GP:KKZ55788.1;Name=KKZ55788.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639188.1;locus_tag=AAX15_03360;product=transketolase;protein_id=KKZ55788.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 108970 109638 . + . ID=gene-AAX15_03365;Name=AAX15_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03365 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 108970 109638 . + 0 ID=cds-KKZ55789.1;Parent=gene-AAX15_03365;Dbxref=NCBI_GP:KKZ55789.1;Name=KKZ55789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646802.1;locus_tag=AAX15_03365;product=membrane protein;protein_id=KKZ55789.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 109649 110059 . + . ID=gene-AAX15_03370;Name=AAX15_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03370 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 109649 110059 . + 0 ID=cds-KKZ55790.1;Parent=gene-AAX15_03370;Dbxref=NCBI_GP:KKZ55790.1;Name=KKZ55790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641332.1;locus_tag=AAX15_03370;product=recombinase XerC;protein_id=KKZ55790.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 110056 110733 . + . ID=gene-AAX15_03375;Name=AAX15_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03375 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 110056 110733 . + 0 ID=cds-KKZ55791.1;Parent=gene-AAX15_03375;Dbxref=NCBI_GP:KKZ55791.1;Name=KKZ55791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641330.1;locus_tag=AAX15_03375;product=lipoprotein;protein_id=KKZ55791.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 110787 111791 . - . ID=gene-AAX15_03380;Name=AAX15_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03380 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 110787 111791 . - 0 ID=cds-KKZ55792.1;Parent=gene-AAX15_03380;Dbxref=NCBI_GP:KKZ55792.1;Name=KKZ55792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526120.1;locus_tag=AAX15_03380;product=biotin synthase;protein_id=KKZ55792.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 111912 112559 . - . ID=gene-AAX15_03385;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AAX15_03385 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 111912 112559 . - 0 ID=cds-KKZ55793.1;Parent=gene-AAX15_03385;Dbxref=NCBI_GP:KKZ55793.1;Name=KKZ55793.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641326.1;locus_tag=AAX15_03385;product=thiamine ABC transporter ATP-binding protein;protein_id=KKZ55793.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 112543 114159 . - . ID=gene-AAX15_03390;Name=AAX15_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03390 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 112543 114159 . - 0 ID=cds-KKZ55794.1;Parent=gene-AAX15_03390;Dbxref=NCBI_GP:KKZ55794.1;Name=KKZ55794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639182.1;locus_tag=AAX15_03390;product=thiamine ABC transporter permease;protein_id=KKZ55794.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 114164 115162 . - . ID=gene-AAX15_03395;Name=AAX15_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03395 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 114164 115162 . - 0 ID=cds-KKZ55795.1;Parent=gene-AAX15_03395;Dbxref=NCBI_GP:KKZ55795.1;Name=KKZ55795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995652.1;locus_tag=AAX15_03395;product=thiamine ABC transporter substrate-binding protein;protein_id=KKZ55795.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Protein Homology pseudogene 115310 115581 . - . ID=gene-AAX15_03400;Name=AAX15_03400;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03400;pseudo=true GCA_001008275.1|LCTH01000022.1 Genbank gene 115689 116066 . + . ID=gene-AAX15_03405;Name=AAX15_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03405 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 115689 116066 . + 0 ID=cds-KKZ55796.1;Parent=gene-AAX15_03405;Dbxref=NCBI_GP:KKZ55796.1;Name=KKZ55796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646823.1;locus_tag=AAX15_03405;product=hypothetical protein;protein_id=KKZ55796.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 116095 116442 . - . ID=gene-AAX15_03410;Name=AAX15_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03410 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 116095 116442 . - 0 ID=cds-KKZ55797.1;Parent=gene-AAX15_03410;Dbxref=NCBI_GP:KKZ55797.1;Name=KKZ55797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646772.1;locus_tag=AAX15_03410;product=competence protein ComE;protein_id=KKZ55797.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 116613 117557 . - . ID=gene-AAX15_03415;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AAX15_03415 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 116613 117557 . - 0 ID=cds-KKZ55798.1;Parent=gene-AAX15_03415;Dbxref=NCBI_GP:KKZ55798.1;Name=KKZ55798.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLQ5.1;locus_tag=AAX15_03415;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=KKZ55798.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 117554 118069 . - . ID=gene-AAX15_03420;Name=AAX15_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03420 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 117554 118069 . - 0 ID=cds-KKZ55799.1;Parent=gene-AAX15_03420;Dbxref=NCBI_GP:KKZ55799.1;Name=KKZ55799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630989.1;locus_tag=AAX15_03420;product=lipoprotein signal peptidase;protein_id=KKZ55799.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 118139 119695 . - . ID=gene-AAX15_03425;Name=AAX15_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03425 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 118139 119695 . - 0 ID=cds-KKZ55800.1;Parent=gene-AAX15_03425;Dbxref=NCBI_GP:KKZ55800.1;Name=KKZ55800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639174.1;locus_tag=AAX15_03425;product=phosphoethanolamine transferase;protein_id=KKZ55800.1;transl_table=11 GCA_001008275.1|LCTH01000022.1 Genbank gene 119775 120431 . - . ID=gene-AAX15_03430;Name=AAX15_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03430 GCA_001008275.1|LCTH01000022.1 Protein Homology CDS 119775 120431 . - 0 ID=cds-KKZ55801.1;Parent=gene-AAX15_03430;Dbxref=NCBI_GP:KKZ55801.1;Name=KKZ55801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500184.1;locus_tag=AAX15_03430;product=hypothetical protein;protein_id=KKZ55801.1;transl_table=11 ##sequence-region LCTH01000023.1 1 1381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000023.1 Genbank region 1 1381 . + . ID=LCTH01000023.1:1..1381;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000023.1 Genbank gene 1 1381 . + . ID=gene-AAX15_03435;Name=AAX15_03435;end_range=1381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03435;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000023.1 Protein Homology CDS 1 1381 . + 1 ID=cds-KKZ55653.1;Parent=gene-AAX15_03435;Dbxref=NCBI_GP:KKZ55653.1;Name=KKZ55653.1;end_range=1381,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001379216.1;locus_tag=AAX15_03435;partial=true;product=hypothetical protein;protein_id=KKZ55653.1;start_range=.,1;transl_table=11 ##sequence-region LCTH01000024.1 1 16435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000024.1 Genbank region 1 16435 . + . ID=LCTH01000024.1:1..16435;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000024.1 Protein Homology pseudogene 1 643 . - . ID=gene-AAX15_03440;Name=AAX15_03440;Note=disrupted;description=AraC family transcriptional regulator;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03440;pseudo=true GCA_001008275.1|LCTH01000024.1 Genbank gene 1059 2000 . + . ID=gene-AAX15_03445;Name=AAX15_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03445 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 1059 2000 . + 0 ID=cds-KKZ55581.1;Parent=gene-AAX15_03445;Dbxref=NCBI_GP:KKZ55581.1;Name=KKZ55581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634611.1;locus_tag=AAX15_03445;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=KKZ55581.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 2002 2337 . + . ID=gene-AAX15_03450;Name=AAX15_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03450 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 2002 2337 . + 0 ID=cds-KKZ55582.1;Parent=gene-AAX15_03450;Dbxref=NCBI_GP:KKZ55582.1;Name=KKZ55582.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656764.1;locus_tag=AAX15_03450;product=sulfur transfer protein TusE;protein_id=KKZ55582.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 2445 2654 . + . ID=gene-AAX15_03455;Name=AAX15_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03455 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 2445 2654 . + 0 ID=cds-KKZ55583.1;Parent=gene-AAX15_03455;Dbxref=NCBI_GP:KKZ55583.1;Name=KKZ55583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707948.1;locus_tag=AAX15_03455;product=molybdenum-pterin-binding protein;protein_id=KKZ55583.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 2834 4765 . - . ID=gene-AAX15_03460;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AAX15_03460 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 2834 4765 . - 0 ID=cds-KKZ55584.1;Parent=gene-AAX15_03460;Dbxref=NCBI_GP:KKZ55584.1;Name=KKZ55584.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK77.1;locus_tag=AAX15_03460;product=threonine--tRNA ligase;protein_id=KKZ55584.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 5051 5635 . + . ID=gene-AAX15_03465;Name=AAX15_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03465 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 5051 5635 . + 0 ID=cds-KKZ55585.1;Parent=gene-AAX15_03465;Dbxref=NCBI_GP:KKZ55585.1;Name=KKZ55585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634605.1;locus_tag=AAX15_03465;product=FMN-dependent NADH-azoreductase;protein_id=KKZ55585.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 5709 8315 . - . ID=gene-AAX15_03470;Name=AAX15_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03470 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 5709 8315 . - 0 ID=cds-KKZ55586.1;Parent=gene-AAX15_03470;Dbxref=NCBI_GP:KKZ55586.1;Name=KKZ55586.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43012.1;locus_tag=AAX15_03470;product=DNA topoisomerase I;protein_id=KKZ55586.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 8411 9328 . + . ID=gene-AAX15_03475;Name=AAX15_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03475 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 8411 9328 . + 0 ID=cds-KKZ55587.1;Parent=gene-AAX15_03475;Dbxref=NCBI_GP:KKZ55587.1;Name=KKZ55587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641905.1;locus_tag=AAX15_03475;product=LysR family transcriptional regulator;protein_id=KKZ55587.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 9390 10814 . - . ID=gene-AAX15_03480;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AAX15_03480 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 9390 10814 . - 0 ID=cds-KKZ55588.1;Parent=gene-AAX15_03480;Dbxref=NCBI_GP:KKZ55588.1;Name=KKZ55588.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43010.1;locus_tag=AAX15_03480;product=pyridine nucleotide transhydrogenase;protein_id=KKZ55588.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 10825 12363 . - . ID=gene-AAX15_03485;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AAX15_03485 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 10825 12363 . - 0 ID=cds-KKZ55589.1;Parent=gene-AAX15_03485;Dbxref=NCBI_GP:KKZ55589.1;Name=KKZ55589.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996049.1;locus_tag=AAX15_03485;product=NAD(P) transhydrogenase subunit alpha;protein_id=KKZ55589.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 12617 13192 . - . ID=gene-AAX15_03490;Name=AAX15_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03490 GCA_001008275.1|LCTH01000024.1 GeneMarkS+ CDS 12617 13192 . - 0 ID=cds-KKZ55590.1;Parent=gene-AAX15_03490;Dbxref=NCBI_GP:KKZ55590.1;Name=KKZ55590.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03490;product=hypothetical protein;protein_id=KKZ55590.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 13360 13902 . - . ID=gene-AAX15_03495;Name=AAX15_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03495 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 13360 13902 . - 0 ID=cds-KKZ55591.1;Parent=gene-AAX15_03495;Dbxref=NCBI_GP:KKZ55591.1;Name=KKZ55591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637792.1;locus_tag=AAX15_03495;product=RNA 2'-phosphotransferase;protein_id=KKZ55591.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 13904 14269 . - . ID=gene-AAX15_03500;Name=AAX15_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03500 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 13904 14269 . - 0 ID=cds-KKZ55592.1;Parent=gene-AAX15_03500;Dbxref=NCBI_GP:KKZ55592.1;Name=KKZ55592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637791.1;locus_tag=AAX15_03500;product=hypothetical protein;protein_id=KKZ55592.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 14281 14616 . - . ID=gene-AAX15_03505;Name=AAX15_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03505 GCA_001008275.1|LCTH01000024.1 Protein Homology CDS 14281 14616 . - 0 ID=cds-KKZ55595.1;Parent=gene-AAX15_03505;Dbxref=NCBI_GP:KKZ55595.1;Name=KKZ55595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718144.1;locus_tag=AAX15_03505;product=hypothetical protein;protein_id=KKZ55595.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 15943 16149 . - . ID=gene-AAX15_03510;Name=AAX15_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03510 GCA_001008275.1|LCTH01000024.1 GeneMarkS+ CDS 15943 16149 . - 0 ID=cds-KKZ55593.1;Parent=gene-AAX15_03510;Dbxref=NCBI_GP:KKZ55593.1;Name=KKZ55593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03510;product=hypothetical protein;protein_id=KKZ55593.1;transl_table=11 GCA_001008275.1|LCTH01000024.1 Genbank gene 16149 16435 . - . ID=gene-AAX15_03515;Name=AAX15_03515;end_range=16435,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03515;partial=true GCA_001008275.1|LCTH01000024.1 GeneMarkS+ CDS 16149 16435 . - 2 ID=cds-KKZ55594.1;Parent=gene-AAX15_03515;Dbxref=NCBI_GP:KKZ55594.1;Name=KKZ55594.1;end_range=16435,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03515;partial=true;product=hypothetical protein;protein_id=KKZ55594.1;transl_table=11 ##sequence-region LCTH01000025.1 1 1342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000025.1 Genbank region 1 1342 . + . ID=LCTH01000025.1:1..1342;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000025.1 Genbank gene 1 1342 . + . ID=gene-AAX15_03520;Name=AAX15_03520;end_range=1342,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03520;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000025.1 Protein Homology CDS 1 1342 . + 1 ID=cds-KKZ55572.1;Parent=gene-AAX15_03520;Dbxref=NCBI_GP:KKZ55572.1;Name=KKZ55572.1;end_range=1342,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001379216.1;locus_tag=AAX15_03520;partial=true;product=hypothetical protein;protein_id=KKZ55572.1;start_range=.,1;transl_table=11 ##sequence-region LCTH01000026.1 1 48796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000026.1 Genbank region 1 48796 . + . ID=LCTH01000026.1:1..48796;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000026.1 Genbank gene 1 1963 . - . ID=gene-AAX15_03525;Name=AAX15_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03525;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 1 1963 . - 0 ID=cds-KKZ55510.1;Parent=gene-AAX15_03525;Dbxref=NCBI_GP:KKZ55510.1;Name=KKZ55510.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43920.1;locus_tag=AAX15_03525;partial=true;product=phosphoenolpyruvate carboxylase;protein_id=KKZ55510.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 2147 3157 . - . ID=gene-AAX15_03530;Name=AAX15_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03530 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 2147 3157 . - 0 ID=cds-KKZ55511.1;Parent=gene-AAX15_03530;Dbxref=NCBI_GP:KKZ55511.1;Name=KKZ55511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL70.1;locus_tag=AAX15_03530;product=transcriptional regulator;protein_id=KKZ55511.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 3513 4340 . + . ID=gene-AAX15_03535;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AAX15_03535 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 3513 4340 . + 0 ID=cds-KKZ55512.1;Parent=gene-AAX15_03535;Dbxref=NCBI_GP:KKZ55512.1;Name=KKZ55512.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702447.1;locus_tag=AAX15_03535;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=KKZ55512.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 4398 5696 . - . ID=gene-AAX15_03540;Name=AAX15_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03540 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 4398 5696 . - 0 ID=cds-KKZ55513.1;Parent=gene-AAX15_03540;Dbxref=NCBI_GP:KKZ55513.1;Name=KKZ55513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625661.1;locus_tag=AAX15_03540;product=adenylosuccinate synthetase;protein_id=KKZ55513.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 5826 7178 . - . ID=gene-AAX15_03545;Name=AAX15_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03545 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 5826 7178 . - 0 ID=cds-KKZ55514.1;Parent=gene-AAX15_03545;Dbxref=NCBI_GP:KKZ55514.1;Name=KKZ55514.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644773.1;locus_tag=AAX15_03545;product=aspartate kinase;protein_id=KKZ55514.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 7543 7619 . + . ID=gene-AAX15_03550;Name=AAX15_03550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_03550 GCA_001008275.1|LCTH01000026.1 tRNAscan-SE tRNA 7543 7619 . + . ID=rna-AAX15_03550;Parent=gene-AAX15_03550;anticodon=(pos:7577..7579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03550;product=tRNA-Met GCA_001008275.1|LCTH01000026.1 tRNAscan-SE exon 7543 7619 . + . ID=exon-AAX15_03550-1;Parent=rna-AAX15_03550;anticodon=(pos:7577..7579);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03550;product=tRNA-Met GCA_001008275.1|LCTH01000026.1 Genbank gene 7625 7709 . + . ID=gene-AAX15_03555;Name=AAX15_03555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_03555 GCA_001008275.1|LCTH01000026.1 tRNAscan-SE tRNA 7625 7709 . + . ID=rna-AAX15_03555;Parent=gene-AAX15_03555;anticodon=(pos:7659..7661);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03555;product=tRNA-Leu GCA_001008275.1|LCTH01000026.1 tRNAscan-SE exon 7625 7709 . + . ID=exon-AAX15_03555-1;Parent=rna-AAX15_03555;anticodon=(pos:7659..7661);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03555;product=tRNA-Leu GCA_001008275.1|LCTH01000026.1 Genbank gene 7738 7812 . + . ID=gene-AAX15_03560;Name=AAX15_03560;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_03560 GCA_001008275.1|LCTH01000026.1 tRNAscan-SE tRNA 7738 7812 . + . ID=rna-AAX15_03560;Parent=gene-AAX15_03560;anticodon=(pos:7770..7772);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03560;product=tRNA-Gln GCA_001008275.1|LCTH01000026.1 tRNAscan-SE exon 7738 7812 . + . ID=exon-AAX15_03560-1;Parent=rna-AAX15_03560;anticodon=(pos:7770..7772);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03560;product=tRNA-Gln GCA_001008275.1|LCTH01000026.1 Genbank gene 7860 7934 . + . ID=gene-AAX15_03565;Name=AAX15_03565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_03565 GCA_001008275.1|LCTH01000026.1 tRNAscan-SE tRNA 7860 7934 . + . ID=rna-AAX15_03565;Parent=gene-AAX15_03565;anticodon=(pos:7892..7894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03565;product=tRNA-Gln GCA_001008275.1|LCTH01000026.1 tRNAscan-SE exon 7860 7934 . + . ID=exon-AAX15_03565-1;Parent=rna-AAX15_03565;anticodon=(pos:7892..7894);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_03565;product=tRNA-Gln GCA_001008275.1|LCTH01000026.1 Genbank gene 8087 8659 . + . ID=gene-AAX15_03570;Name=AAX15_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03570 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 8087 8659 . + 0 ID=cds-KKZ55515.1;Parent=gene-AAX15_03570;Dbxref=NCBI_GP:KKZ55515.1;Name=KKZ55515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691220.1;locus_tag=AAX15_03570;product=hypothetical protein;protein_id=KKZ55515.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 8753 9040 . - . ID=gene-AAX15_03575;Name=AAX15_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03575 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 8753 9040 . - 0 ID=cds-KKZ55516.1;Parent=gene-AAX15_03575;Dbxref=NCBI_GP:KKZ55516.1;Name=KKZ55516.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625668.1;locus_tag=AAX15_03575;product=50S ribosomal protein L25;protein_id=KKZ55516.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 9266 9862 . + . ID=gene-AAX15_03580;Name=AAX15_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03580 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 9266 9862 . + 0 ID=cds-KKZ55517.1;Parent=gene-AAX15_03580;Dbxref=NCBI_GP:KKZ55517.1;Name=KKZ55517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633683.1;locus_tag=AAX15_03580;product=alpha-amylase;protein_id=KKZ55517.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 9932 10546 . - . ID=gene-AAX15_03585;Name=AAX15_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03585 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 9932 10546 . - 0 ID=cds-KKZ55518.1;Parent=gene-AAX15_03585;Dbxref=NCBI_GP:KKZ55518.1;Name=KKZ55518.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644993.1;locus_tag=AAX15_03585;product=riboflavin synthase subunit alpha;protein_id=KKZ55518.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 10589 11983 . + . ID=gene-AAX15_03590;Name=AAX15_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03590 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 10589 11983 . + 0 ID=cds-KKZ55519.1;Parent=gene-AAX15_03590;Dbxref=NCBI_GP:KKZ55519.1;Name=KKZ55519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501030.1;locus_tag=AAX15_03590;product=multidrug transporter MatE;protein_id=KKZ55519.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 11992 12708 . + . ID=gene-AAX15_03595;Name=AAX15_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03595 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 11992 12708 . + 0 ID=cds-KKZ55520.1;Parent=gene-AAX15_03595;Dbxref=NCBI_GP:KKZ55520.1;Name=KKZ55520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550863.1;locus_tag=AAX15_03595;product=transcriptional regulator;protein_id=KKZ55520.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 12908 14095 . + . ID=gene-AAX15_03600;Name=AAX15_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03600 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 12908 14095 . + 0 ID=cds-KKZ55521.1;Parent=gene-AAX15_03600;Dbxref=NCBI_GP:KKZ55521.1;Name=KKZ55521.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501027.1;locus_tag=AAX15_03600;product=tyrosine--tRNA ligase;protein_id=KKZ55521.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 14239 14481 . + . ID=gene-AAX15_03605;Name=AAX15_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03605 GCA_001008275.1|LCTH01000026.1 GeneMarkS+ CDS 14239 14481 . + 0 ID=cds-KKZ55522.1;Parent=gene-AAX15_03605;Dbxref=NCBI_GP:KKZ55522.1;Name=KKZ55522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03605;product=hypothetical protein;protein_id=KKZ55522.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 14608 14850 . + . ID=gene-AAX15_03610;Name=AAX15_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03610 GCA_001008275.1|LCTH01000026.1 GeneMarkS+ CDS 14608 14850 . + 0 ID=cds-KKZ55523.1;Parent=gene-AAX15_03610;Dbxref=NCBI_GP:KKZ55523.1;Name=KKZ55523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03610;product=hypothetical protein;protein_id=KKZ55523.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 15108 17795 . + . ID=gene-AAX15_03615;Name=AAX15_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03615 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 15108 17795 . + 0 ID=cds-KKZ55524.1;Parent=gene-AAX15_03615;Dbxref=NCBI_GP:KKZ55524.1;Name=KKZ55524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628106.1;locus_tag=AAX15_03615;product=hypothetical protein;protein_id=KKZ55524.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 18512 19459 . - . ID=gene-AAX15_03620;Name=AAX15_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03620 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 18512 19459 . - 0 ID=cds-KKZ55525.1;Parent=gene-AAX15_03620;Dbxref=NCBI_GP:KKZ55525.1;Name=KKZ55525.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44328.1;locus_tag=AAX15_03620;product=ribose-phosphate pyrophosphokinase;protein_id=KKZ55525.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 19461 20402 . - . ID=gene-AAX15_03625;Name=AAX15_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03625 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 19461 20402 . - 0 ID=cds-KKZ55549.1;Parent=gene-AAX15_03625;Dbxref=NCBI_GP:KKZ55549.1;Name=KKZ55549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641808.1;locus_tag=AAX15_03625;product=kinase;protein_id=KKZ55549.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 20414 21034 . - . ID=gene-AAX15_03630;Name=AAX15_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03630 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 20414 21034 . - 0 ID=cds-KKZ55550.1;Parent=gene-AAX15_03630;Dbxref=NCBI_GP:KKZ55550.1;Name=KKZ55550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641806.1;locus_tag=AAX15_03630;product=membrane protein;protein_id=KKZ55550.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 21099 22355 . - . ID=gene-AAX15_03635;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AAX15_03635 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 21099 22355 . - 0 ID=cds-KKZ55526.1;Parent=gene-AAX15_03635;Dbxref=NCBI_GP:KKZ55526.1;Name=KKZ55526.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632478.1;locus_tag=AAX15_03635;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=KKZ55526.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 22362 22973 . - . ID=gene-AAX15_03640;Name=AAX15_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03640 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 22362 22973 . - 0 ID=cds-KKZ55527.1;Parent=gene-AAX15_03640;Dbxref=NCBI_GP:KKZ55527.1;Name=KKZ55527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632476.1;locus_tag=AAX15_03640;product=hypothetical protein;protein_id=KKZ55527.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 23041 24303 . - . ID=gene-AAX15_03645;Name=AAX15_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03645 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 23041 24303 . - 0 ID=cds-KKZ55528.1;Parent=gene-AAX15_03645;Dbxref=NCBI_GP:KKZ55528.1;Name=KKZ55528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633709.1;locus_tag=AAX15_03645;product=phosphate permease;protein_id=KKZ55528.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 24328 25008 . - . ID=gene-AAX15_03650;Name=AAX15_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03650 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 24328 25008 . - 0 ID=cds-KKZ55529.1;Parent=gene-AAX15_03650;Dbxref=NCBI_GP:KKZ55529.1;Name=KKZ55529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44271.1;locus_tag=AAX15_03650;product=phosphate transport regulator;protein_id=KKZ55529.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 25143 25355 . - . ID=gene-AAX15_03655;Name=AAX15_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03655 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 25143 25355 . - 0 ID=cds-KKZ55530.1;Parent=gene-AAX15_03655;Dbxref=NCBI_GP:KKZ55530.1;Name=KKZ55530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644891.1;locus_tag=AAX15_03655;product=hypothetical protein;protein_id=KKZ55530.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 25521 26558 . + . ID=gene-AAX15_03660;Name=AAX15_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03660 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 25521 26558 . + 0 ID=cds-KKZ55531.1;Parent=gene-AAX15_03660;Dbxref=NCBI_GP:KKZ55531.1;Name=KKZ55531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644914.1;locus_tag=AAX15_03660;product=hypothetical protein;protein_id=KKZ55531.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 26684 28060 . + . ID=gene-AAX15_03665;Name=AAX15_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03665 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 26684 28060 . + 0 ID=cds-KKZ55532.1;Parent=gene-AAX15_03665;Dbxref=NCBI_GP:KKZ55532.1;Name=KKZ55532.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644699.1;locus_tag=AAX15_03665;product=DNA repair protein RadA;protein_id=KKZ55532.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 28183 28662 . + . ID=gene-AAX15_03670;Name=AAX15_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03670 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 28183 28662 . + 0 ID=cds-KKZ55533.1;Parent=gene-AAX15_03670;Dbxref=NCBI_GP:KKZ55533.1;Name=KKZ55533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45265.1;locus_tag=AAX15_03670;product=leucine-responsive regulatory protein;protein_id=KKZ55533.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 28664 31435 . + . ID=gene-AAX15_03675;Name=AAX15_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03675 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 28664 31435 . + 0 ID=cds-KKZ55534.1;Parent=gene-AAX15_03675;Dbxref=NCBI_GP:KKZ55534.1;Name=KKZ55534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641783.1;locus_tag=AAX15_03675;product=cell division protein FtsK;protein_id=KKZ55534.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 31453 32070 . + . ID=gene-AAX15_03680;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AAX15_03680 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 31453 32070 . + 0 ID=cds-KKZ55535.1;Parent=gene-AAX15_03680;Dbxref=NCBI_GP:KKZ55535.1;Name=KKZ55535.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626003.1;locus_tag=AAX15_03680;product=lipoprotein chaperone;protein_id=KKZ55535.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 32131 33471 . + . ID=gene-AAX15_03685;Name=AAX15_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03685 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 32131 33471 . + 0 ID=cds-KKZ55536.1;Parent=gene-AAX15_03685;Dbxref=NCBI_GP:KKZ55536.1;Name=KKZ55536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550847.1;locus_tag=AAX15_03685;product=recombination factor protein RarA;protein_id=KKZ55536.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 33592 34149 . + . ID=gene-AAX15_03690;Name=AAX15_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03690 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 33592 34149 . + 0 ID=cds-KKZ55537.1;Parent=gene-AAX15_03690;Dbxref=NCBI_GP:KKZ55537.1;Name=KKZ55537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012367651.1;locus_tag=AAX15_03690;product=hypothetical protein;protein_id=KKZ55537.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 34225 34920 . + . ID=gene-AAX15_03695;Name=AAX15_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03695 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 34225 34920 . + 0 ID=cds-KKZ55538.1;Parent=gene-AAX15_03695;Dbxref=NCBI_GP:KKZ55538.1;Name=KKZ55538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707094.1;locus_tag=AAX15_03695;product=molecular chaperone;protein_id=KKZ55538.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 34950 37463 . + . ID=gene-AAX15_03700;Name=AAX15_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03700 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 34950 37463 . + 0 ID=cds-KKZ55539.1;Parent=gene-AAX15_03700;Dbxref=NCBI_GP:KKZ55539.1;Name=KKZ55539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707097.1;locus_tag=AAX15_03700;product=usher protein;protein_id=KKZ55539.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Protein Homology pseudogene 38149 38616 . + . ID=gene-AAX15_03705;Name=AAX15_03705;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03705;pseudo=true GCA_001008275.1|LCTH01000026.1 Genbank gene 38840 40138 . - . ID=gene-AAX15_03710;Name=AAX15_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03710 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 38840 40138 . - 0 ID=cds-KKZ55540.1;Parent=gene-AAX15_03710;Dbxref=NCBI_GP:KKZ55540.1;Name=KKZ55540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633725.1;locus_tag=AAX15_03710;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=KKZ55540.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 40138 40974 . - . ID=gene-AAX15_03715;Name=AAX15_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03715 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 40138 40974 . - 0 ID=cds-KKZ55541.1;Parent=gene-AAX15_03715;Dbxref=NCBI_GP:KKZ55541.1;Name=KKZ55541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641775.1;locus_tag=AAX15_03715;product=formyltetrahydrofolate deformylase;protein_id=KKZ55541.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 41045 41449 . - . ID=gene-AAX15_03720;Name=AAX15_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03720 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 41045 41449 . - 0 ID=cds-KKZ55542.1;Parent=gene-AAX15_03720;Dbxref=NCBI_GP:KKZ55542.1;Name=KKZ55542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633727.1;locus_tag=AAX15_03720;product=DNA-binding protein H-NS-like protein;protein_id=KKZ55542.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 41901 43421 . + . ID=gene-AAX15_03725;Name=AAX15_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03725 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 41901 43421 . + 0 ID=cds-KKZ55543.1;Parent=gene-AAX15_03725;Dbxref=NCBI_GP:KKZ55543.1;Name=KKZ55543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633728.1;locus_tag=AAX15_03725;product=hypothetical protein;protein_id=KKZ55543.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 43688 45409 . + . ID=gene-AAX15_03730;Name=AAX15_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03730 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 43688 45409 . + 0 ID=cds-KKZ55544.1;Parent=gene-AAX15_03730;Dbxref=NCBI_GP:KKZ55544.1;Name=KKZ55544.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500647.1;locus_tag=AAX15_03730;product=acetolactate synthase 3 catalytic subunit;protein_id=KKZ55544.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 45409 45900 . + . ID=gene-AAX15_03735;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=AAX15_03735 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 45409 45900 . + 0 ID=cds-KKZ55545.1;Parent=gene-AAX15_03735;Dbxref=NCBI_GP:KKZ55545.1;Name=KKZ55545.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;inference=EXISTENCE: similar to AA sequence:SwissProt:P45260.1;locus_tag=AAX15_03735;product=acetolactate synthase 3 regulatory subunit;protein_id=KKZ55545.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 46195 47928 . - . ID=gene-AAX15_03740;Name=AAX15_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03740 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 46195 47928 . - 0 ID=cds-KKZ55546.1;Parent=gene-AAX15_03740;Dbxref=NCBI_GP:KKZ55546.1;Name=KKZ55546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL12.1;locus_tag=AAX15_03740;product=arginyl-tRNA synthetase;protein_id=KKZ55546.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 48008 48577 . + . ID=gene-AAX15_03745;Name=AAX15_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03745 GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 48008 48577 . + 0 ID=cds-KKZ55547.1;Parent=gene-AAX15_03745;Dbxref=NCBI_GP:KKZ55547.1;Name=KKZ55547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644797.1;locus_tag=AAX15_03745;product=hypothetical protein;protein_id=KKZ55547.1;transl_table=11 GCA_001008275.1|LCTH01000026.1 Genbank gene 48582 48796 . + . ID=gene-AAX15_03750;Name=AAX15_03750;end_range=48796,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03750;partial=true GCA_001008275.1|LCTH01000026.1 Protein Homology CDS 48582 48796 . + 0 ID=cds-KKZ55548.1;Parent=gene-AAX15_03750;Dbxref=NCBI_GP:KKZ55548.1;Name=KKZ55548.1;end_range=48796,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500642.1;locus_tag=AAX15_03750;partial=true;product=glucose-6-phosphate isomerase;protein_id=KKZ55548.1;transl_table=11 ##sequence-region LCTH01000027.1 1 39572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000027.1 Genbank region 1 39572 . + . ID=LCTH01000027.1:1..39572;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000027.1 Genbank gene 8 2650 . - . ID=gene-AAX15_03755;Name=AAX15_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03755 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 8 2650 . - 0 ID=cds-KKZ55397.1;Parent=gene-AAX15_03755;Dbxref=NCBI_GP:KKZ55397.1;Name=KKZ55397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644946.1;locus_tag=AAX15_03755;product=hypothetical protein;protein_id=KKZ55397.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 2634 3884 . - . ID=gene-AAX15_03760;Name=AAX15_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03760 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 2634 3884 . - 0 ID=cds-KKZ55398.1;Parent=gene-AAX15_03760;Dbxref=NCBI_GP:KKZ55398.1;Name=KKZ55398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640450.1;locus_tag=AAX15_03760;product=membrane protein;protein_id=KKZ55398.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 4064 4702 . + . ID=gene-AAX15_03765;Name=AAX15_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03765 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 4064 4702 . + 0 ID=cds-KKZ55399.1;Parent=gene-AAX15_03765;Dbxref=NCBI_GP:KKZ55399.1;Name=KKZ55399.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628442.1;locus_tag=AAX15_03765;product=prop expression regulator;protein_id=KKZ55399.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 4729 6804 . + . ID=gene-AAX15_03770;Name=AAX15_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03770 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 4729 6804 . + 0 ID=cds-KKZ55400.1;Parent=gene-AAX15_03770;Dbxref=NCBI_GP:KKZ55400.1;Name=KKZ55400.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628444.1;locus_tag=AAX15_03770;product=carboxy-terminal protease;protein_id=KKZ55400.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 6874 8340 . + . ID=gene-AAX15_03775;Name=AAX15_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03775 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 6874 8340 . + 0 ID=cds-KKZ55401.1;Parent=gene-AAX15_03775;Dbxref=NCBI_GP:KKZ55401.1;Name=KKZ55401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501001.1;locus_tag=AAX15_03775;product=L%2CD-transpeptidase;protein_id=KKZ55401.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 8371 8931 . + . ID=gene-AAX15_03780;Name=AAX15_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03780 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 8371 8931 . + 0 ID=cds-KKZ55402.1;Parent=gene-AAX15_03780;Dbxref=NCBI_GP:KKZ55402.1;Name=KKZ55402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628448.1;locus_tag=AAX15_03780;product=hypothetical protein;protein_id=KKZ55402.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 8984 9739 . + . ID=gene-AAX15_03785;Name=AAX15_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03785 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 8984 9739 . + 0 ID=cds-KKZ55403.1;Parent=gene-AAX15_03785;Dbxref=NCBI_GP:KKZ55403.1;Name=KKZ55403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637118.1;locus_tag=AAX15_03785;product=deoxyribonuclease;protein_id=KKZ55403.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 9749 10381 . + . ID=gene-AAX15_03790;Name=AAX15_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03790 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 9749 10381 . + 0 ID=cds-KKZ55404.1;Parent=gene-AAX15_03790;Dbxref=NCBI_GP:KKZ55404.1;Name=KKZ55404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501004.1;locus_tag=AAX15_03790;product=beta-lactamase;protein_id=KKZ55404.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 10586 13393 . + . ID=gene-AAX15_03795;Name=AAX15_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03795 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 10586 13393 . + 0 ID=cds-KKZ55405.1;Parent=gene-AAX15_03795;Dbxref=NCBI_GP:KKZ55405.1;Name=KKZ55405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628456.1;locus_tag=AAX15_03795;product=2-oxoglutarate dehydrogenase;protein_id=KKZ55405.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 13515 14744 . + . ID=gene-AAX15_03800;Name=AAX15_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03800 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 13515 14744 . + 0 ID=cds-KKZ55406.1;Parent=gene-AAX15_03800;Dbxref=NCBI_GP:KKZ55406.1;Name=KKZ55406.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654196.1;locus_tag=AAX15_03800;product=dihydrolipoamide succinyltransferase;protein_id=KKZ55406.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 14860 15990 . - . ID=gene-AAX15_03805;Name=AAX15_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03805 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 14860 15990 . - 0 ID=cds-KKZ55407.1;Parent=gene-AAX15_03805;Dbxref=NCBI_GP:KKZ55407.1;Name=KKZ55407.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241315.1;locus_tag=AAX15_03805;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=KKZ55407.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 15993 16886 . - . ID=gene-AAX15_03810;Name=AAX15_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03810 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 15993 16886 . - 0 ID=cds-KKZ55408.1;Parent=gene-AAX15_03810;Dbxref=NCBI_GP:KKZ55408.1;Name=KKZ55408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635837.1;locus_tag=AAX15_03810;product=hypothetical protein;protein_id=KKZ55408.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 16896 19166 . - . ID=gene-AAX15_03815;Name=AAX15_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03815 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 16896 19166 . - 0 ID=cds-KKZ55409.1;Parent=gene-AAX15_03815;Dbxref=NCBI_GP:KKZ55409.1;Name=KKZ55409.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356743.1;locus_tag=AAX15_03815;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=KKZ55409.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Protein Homology pseudogene 19895 20233 . - . ID=gene-AAX15_03820;Name=AAX15_03820;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03820;pseudo=true GCA_001008275.1|LCTH01000027.1 Genbank gene 20323 21873 . + . ID=gene-AAX15_03825;Name=AAX15_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03825 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 20323 21873 . + 0 ID=cds-KKZ55410.1;Parent=gene-AAX15_03825;Dbxref=NCBI_GP:KKZ55410.1;Name=KKZ55410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524916.1;locus_tag=AAX15_03825;product=glycosyltransferase;protein_id=KKZ55410.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 22259 22840 . - . ID=gene-AAX15_03830;Name=AAX15_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03830 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 22259 22840 . - 0 ID=cds-KKZ55411.1;Parent=gene-AAX15_03830;Dbxref=NCBI_GP:KKZ55411.1;Name=KKZ55411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628465.1;locus_tag=AAX15_03830;product=membrane protein;protein_id=KKZ55411.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 22897 23481 . - . ID=gene-AAX15_03835;Name=AAX15_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03835 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 22897 23481 . - 0 ID=cds-KKZ55412.1;Parent=gene-AAX15_03835;Dbxref=NCBI_GP:KKZ55412.1;Name=KKZ55412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635830.1;locus_tag=AAX15_03835;product=hypothetical protein;protein_id=KKZ55412.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 23494 23853 . - . ID=gene-AAX15_03840;Name=AAX15_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03840 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 23494 23853 . - 0 ID=cds-KKZ55413.1;Parent=gene-AAX15_03840;Dbxref=NCBI_GP:KKZ55413.1;Name=KKZ55413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702458.1;locus_tag=AAX15_03840;product=hypothetical protein;protein_id=KKZ55413.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 23853 25580 . - . ID=gene-AAX15_03845;Name=AAX15_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03845 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 23853 25580 . - 0 ID=cds-KKZ55414.1;Parent=gene-AAX15_03845;Dbxref=NCBI_GP:KKZ55414.1;Name=KKZ55414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645073.1;locus_tag=AAX15_03845;product=penicillin-binding protein;protein_id=KKZ55414.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 25652 26503 . + . ID=gene-AAX15_03850;Name=AAX15_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03850 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 25652 26503 . + 0 ID=cds-KKZ55415.1;Parent=gene-AAX15_03850;Dbxref=NCBI_GP:KKZ55415.1;Name=KKZ55415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632528.1;locus_tag=AAX15_03850;product=tetrapyrrole methylase;protein_id=KKZ55415.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 26606 28054 . + . ID=gene-AAX15_03855;Name=AAX15_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03855 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 26606 28054 . + 0 ID=cds-KKZ55416.1;Parent=gene-AAX15_03855;Dbxref=NCBI_GP:KKZ55416.1;Name=KKZ55416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45297.1;locus_tag=AAX15_03855;product=protein TldD;protein_id=KKZ55416.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 28176 28727 . + . ID=gene-AAX15_03860;Name=AAX15_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03860 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 28176 28727 . + 0 ID=cds-KKZ55417.1;Parent=gene-AAX15_03860;Dbxref=NCBI_GP:KKZ55417.1;Name=KKZ55417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501015.1;locus_tag=AAX15_03860;product=endopeptidase;protein_id=KKZ55417.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 28812 29813 . - . ID=gene-AAX15_03865;Name=AAX15_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03865 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 28812 29813 . - 0 ID=cds-KKZ55418.1;Parent=gene-AAX15_03865;Dbxref=NCBI_GP:KKZ55418.1;Name=KKZ55418.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686552.1;locus_tag=AAX15_03865;product=fructose 1%2C6-bisphosphatase;protein_id=KKZ55418.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 30048 30857 . + . ID=gene-AAX15_03870;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=AAX15_03870 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 30048 30857 . + 0 ID=cds-KKZ55419.1;Parent=gene-AAX15_03870;Dbxref=NCBI_GP:KKZ55419.1;Name=KKZ55419.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626049.1;locus_tag=AAX15_03870;product=tRNA pseudouridine synthase A;protein_id=KKZ55419.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 30950 31966 . - . ID=gene-AAX15_03875;Name=AAX15_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03875 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 30950 31966 . - 0 ID=cds-KKZ55420.1;Parent=gene-AAX15_03875;Dbxref=NCBI_GP:KKZ55420.1;Name=KKZ55420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626051.1;locus_tag=AAX15_03875;product=membrane protein;protein_id=KKZ55420.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 31978 32787 . - . ID=gene-AAX15_03880;Name=AAX15_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03880 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 31978 32787 . - 0 ID=cds-KKZ55421.1;Parent=gene-AAX15_03880;Dbxref=NCBI_GP:KKZ55421.1;Name=KKZ55421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626053.1;locus_tag=AAX15_03880;product=peptide ABC transporter ATP-binding protein;protein_id=KKZ55421.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 32787 33836 . - . ID=gene-AAX15_03885;Name=AAX15_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03885 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 32787 33836 . - 0 ID=cds-KKZ55422.1;Parent=gene-AAX15_03885;Dbxref=NCBI_GP:KKZ55422.1;Name=KKZ55422.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626055.1;locus_tag=AAX15_03885;product=peptide ABC transporter ATP-binding protein;protein_id=KKZ55422.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 33840 34727 . - . ID=gene-AAX15_03890;Name=AAX15_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03890 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 33840 34727 . - 0 ID=cds-KKZ55423.1;Parent=gene-AAX15_03890;Dbxref=NCBI_GP:KKZ55423.1;Name=KKZ55423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632516.1;locus_tag=AAX15_03890;product=peptide ABC transporter permease;protein_id=KKZ55423.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 34717 35682 . - . ID=gene-AAX15_03895;Name=AAX15_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03895 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 34717 35682 . - 0 ID=cds-KKZ55424.1;Parent=gene-AAX15_03895;Dbxref=NCBI_GP:KKZ55424.1;Name=KKZ55424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644965.1;locus_tag=AAX15_03895;product=peptide ABC transporter permease;protein_id=KKZ55424.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 35682 37376 . - . ID=gene-AAX15_03900;Name=AAX15_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03900 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 35682 37376 . - 0 ID=cds-KKZ55425.1;Parent=gene-AAX15_03900;Dbxref=NCBI_GP:KKZ55425.1;Name=KKZ55425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644840.1;locus_tag=AAX15_03900;product=peptide ABC transporter substrate-binding protein;protein_id=KKZ55425.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 37446 38858 . + . ID=gene-AAX15_03905;Name=AAX15_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03905 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 37446 38858 . + 0 ID=cds-KKZ55426.1;Parent=gene-AAX15_03905;Dbxref=NCBI_GP:KKZ55426.1;Name=KKZ55426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44280.1;locus_tag=AAX15_03905;product=hypothetical protein;protein_id=KKZ55426.1;transl_table=11 GCA_001008275.1|LCTH01000027.1 Genbank gene 38896 39570 . - . ID=gene-AAX15_03910;Name=AAX15_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03910 GCA_001008275.1|LCTH01000027.1 Protein Homology CDS 38896 39570 . - 0 ID=cds-KKZ55427.1;Parent=gene-AAX15_03910;Dbxref=NCBI_GP:KKZ55427.1;Name=KKZ55427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702448.1;locus_tag=AAX15_03910;product=hypothetical protein;protein_id=KKZ55427.1;transl_table=11 ##sequence-region LCTH01000028.1 1 21341 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000028.1 Genbank region 1 21341 . + . ID=LCTH01000028.1:1..21341;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000028.1 Genbank gene 299 781 . - . ID=gene-AAX15_03915;Name=AAX15_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03915 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 299 781 . - 0 ID=cds-KKZ55368.1;Parent=gene-AAX15_03915;Dbxref=NCBI_GP:KKZ55368.1;Name=KKZ55368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629322.1;locus_tag=AAX15_03915;product=DNA-binding protein;protein_id=KKZ55368.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 1051 1929 . + . ID=gene-AAX15_03920;Name=AAX15_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03920 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 1051 1929 . + 0 ID=cds-KKZ55369.1;Parent=gene-AAX15_03920;Dbxref=NCBI_GP:KKZ55369.1;Name=KKZ55369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500315.1;locus_tag=AAX15_03920;product=cytidine deaminase;protein_id=KKZ55369.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 1979 2944 . - . ID=gene-AAX15_03925;Name=AAX15_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03925 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 1979 2944 . - 0 ID=cds-KKZ55370.1;Parent=gene-AAX15_03925;Dbxref=NCBI_GP:KKZ55370.1;Name=KKZ55370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VMT0.1;locus_tag=AAX15_03925;product=tRNA (mo5U34)-methyltransferase;protein_id=KKZ55370.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 2941 4455 . - . ID=gene-AAX15_03930;Name=AAX15_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03930 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 2941 4455 . - 0 ID=cds-KKZ55371.1;Parent=gene-AAX15_03930;Dbxref=NCBI_GP:KKZ55371.1;Name=KKZ55371.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687244.1;locus_tag=AAX15_03930;product=proline:sodium symporter PutP;protein_id=KKZ55371.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 4571 6046 . + . ID=gene-AAX15_03935;Name=AAX15_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03935 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 4571 6046 . + 0 ID=cds-KKZ55372.1;Parent=gene-AAX15_03935;Dbxref=NCBI_GP:KKZ55372.1;Name=KKZ55372.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45175.1;locus_tag=AAX15_03935;product=ribonuclease G;protein_id=KKZ55372.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 6127 7392 . + . ID=gene-AAX15_03940;Name=AAX15_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03940 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 6127 7392 . + 0 ID=cds-KKZ55373.1;Parent=gene-AAX15_03940;Dbxref=NCBI_GP:KKZ55373.1;Name=KKZ55373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523798.1;locus_tag=AAX15_03940;product=hypothetical protein;protein_id=KKZ55373.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Protein Homology pseudogene 7502 9559 . + . ID=gene-AAX15_03945;Name=AAX15_03945;Note=disrupted;description=ATPase AAA;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03945;pseudo=true GCA_001008275.1|LCTH01000028.1 Genbank gene 9719 10489 . - . ID=gene-AAX15_03950;Name=AAX15_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03950 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 9719 10489 . - 0 ID=cds-KKZ55384.1;Parent=gene-AAX15_03950;Dbxref=NCBI_GP:KKZ55384.1;Name=KKZ55384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241389.1;locus_tag=AAX15_03950;product=integrase;protein_id=KKZ55384.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 10522 10896 . - . ID=gene-AAX15_03955;Name=AAX15_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03955 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 10522 10896 . - 0 ID=cds-KKZ55374.1;Parent=gene-AAX15_03955;Dbxref=NCBI_GP:KKZ55374.1;Name=KKZ55374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702009.1;locus_tag=AAX15_03955;product=transposase;protein_id=KKZ55374.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 10952 11476 . - . ID=gene-AAX15_03960;Name=AAX15_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03960 GCA_001008275.1|LCTH01000028.1 GeneMarkS+ CDS 10952 11476 . - 0 ID=cds-KKZ55375.1;Parent=gene-AAX15_03960;Dbxref=NCBI_GP:KKZ55375.1;Name=KKZ55375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_03960;product=hypothetical protein;protein_id=KKZ55375.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 11756 12016 . + . ID=gene-AAX15_03965;Name=AAX15_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03965 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 11756 12016 . + 0 ID=cds-KKZ55376.1;Parent=gene-AAX15_03965;Dbxref=NCBI_GP:KKZ55376.1;Name=KKZ55376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996057.1;locus_tag=AAX15_03965;product=virulence protein;protein_id=KKZ55376.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Protein Homology pseudogene 12017 12408 . + . ID=gene-AAX15_03970;Name=AAX15_03970;Note=disrupted;description=twitching motility protein PilT;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03970;pseudo=true GCA_001008275.1|LCTH01000028.1 Protein Homology pseudogene 12629 13123 . - . ID=gene-AAX15_03975;Name=AAX15_03975;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03975;pseudo=true GCA_001008275.1|LCTH01000028.1 Protein Homology pseudogene 13120 13506 . - . ID=gene-AAX15_03980;Name=AAX15_03980;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_03980;pseudo=true GCA_001008275.1|LCTH01000028.1 Genbank gene 13882 14670 . - . ID=gene-AAX15_03985;Name=AAX15_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03985 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 13882 14670 . - 0 ID=cds-KKZ55377.1;Parent=gene-AAX15_03985;Dbxref=NCBI_GP:KKZ55377.1;Name=KKZ55377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005243563.1;locus_tag=AAX15_03985;product=hypothetical protein;protein_id=KKZ55377.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 14654 16231 . - . ID=gene-AAX15_03990;Name=AAX15_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03990 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 14654 16231 . - 0 ID=cds-KKZ55378.1;Parent=gene-AAX15_03990;Dbxref=NCBI_GP:KKZ55378.1;Name=KKZ55378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001907785.1;locus_tag=AAX15_03990;product=hypothetical protein;protein_id=KKZ55378.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 16221 17102 . - . ID=gene-AAX15_03995;Name=AAX15_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_03995 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 16221 17102 . - 0 ID=cds-KKZ55385.1;Parent=gene-AAX15_03995;Dbxref=NCBI_GP:KKZ55385.1;Name=KKZ55385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010308068.1;locus_tag=AAX15_03995;product=hypothetical protein;protein_id=KKZ55385.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Protein Homology pseudogene 17464 17730 . - . ID=gene-AAX15_04000;Name=AAX15_04000;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_04000;pseudo=true GCA_001008275.1|LCTH01000028.1 Genbank gene 17748 18008 . - . ID=gene-AAX15_04005;Name=AAX15_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04005 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 17748 18008 . - 0 ID=cds-KKZ55379.1;Parent=gene-AAX15_04005;Dbxref=NCBI_GP:KKZ55379.1;Name=KKZ55379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645409.1;locus_tag=AAX15_04005;product=hypothetical protein;protein_id=KKZ55379.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 18121 18666 . + . ID=gene-AAX15_04010;Name=AAX15_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04010 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 18121 18666 . + 0 ID=cds-KKZ55386.1;Parent=gene-AAX15_04010;Dbxref=NCBI_GP:KKZ55386.1;Name=KKZ55386.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645297.1;locus_tag=AAX15_04010;product=RNA polymerase sigma factor;protein_id=KKZ55386.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 18676 18849 . + . ID=gene-AAX15_04015;Name=AAX15_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04015 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 18676 18849 . + 0 ID=cds-KKZ55380.1;Parent=gene-AAX15_04015;Dbxref=NCBI_GP:KKZ55380.1;Name=KKZ55380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500307.1;locus_tag=AAX15_04015;product=dsDNA-mimic protein;protein_id=KKZ55380.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 18953 19816 . - . ID=gene-AAX15_04020;Name=AAX15_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04020 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 18953 19816 . - 0 ID=cds-KKZ55381.1;Parent=gene-AAX15_04020;Dbxref=NCBI_GP:KKZ55381.1;Name=KKZ55381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656592.1;locus_tag=AAX15_04020;product=UAA transporter family protein;protein_id=KKZ55381.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 19983 21044 . + . ID=gene-AAX15_04025;Name=AAX15_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04025 GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 19983 21044 . + 0 ID=cds-KKZ55382.1;Parent=gene-AAX15_04025;Dbxref=NCBI_GP:KKZ55382.1;Name=KKZ55382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628780.1;locus_tag=AAX15_04025;product=peptide methionine sulfoxide reductase;protein_id=KKZ55382.1;transl_table=11 GCA_001008275.1|LCTH01000028.1 Genbank gene 21056 21341 . + . ID=gene-AAX15_04030;Name=AAX15_04030;end_range=21341,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04030;partial=true GCA_001008275.1|LCTH01000028.1 Protein Homology CDS 21056 21341 . + 0 ID=cds-KKZ55383.1;Parent=gene-AAX15_04030;Dbxref=NCBI_GP:KKZ55383.1;Name=KKZ55383.1;end_range=21341,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44202.1;locus_tag=AAX15_04030;partial=true;product=cytochrome C biogenesis protein;protein_id=KKZ55383.1;transl_table=11 ##sequence-region LCTH01000029.1 1 119161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000029.1 Genbank region 1 119161 . + . ID=LCTH01000029.1:1..119161;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000029.1 Genbank gene 99 854 . - . ID=gene-AAX15_04035;Name=AAX15_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04035 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 99 854 . - 0 ID=cds-KKZ55218.1;Parent=gene-AAX15_04035;Dbxref=NCBI_GP:KKZ55218.1;Name=KKZ55218.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630686.1;locus_tag=AAX15_04035;product=metal-binding protein;protein_id=KKZ55218.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 1230 1373 . + . ID=gene-AAX15_04040;Name=AAX15_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04040 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 1230 1373 . + 0 ID=cds-KKZ55219.1;Parent=gene-AAX15_04040;Dbxref=NCBI_GP:KKZ55219.1;Name=KKZ55219.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44125.1;locus_tag=AAX15_04040;product=hypothetical protein;protein_id=KKZ55219.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Protein Homology pseudogene 1446 2301 . - . ID=gene-AAX15_04045;Name=AAX15_04045;Note=disrupted;description=ABC transporter substrate-binding protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_04045;pseudo=true GCA_001008275.1|LCTH01000029.1 Genbank gene 2285 3049 . - . ID=gene-AAX15_04050;Name=AAX15_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04050 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 2285 3049 . - 0 ID=cds-KKZ55220.1;Parent=gene-AAX15_04050;Dbxref=NCBI_GP:KKZ55220.1;Name=KKZ55220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638718.1;locus_tag=AAX15_04050;product=glutamine ABC transporter ATP-binding protein;protein_id=KKZ55220.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 3059 3727 . - . ID=gene-AAX15_04055;Name=AAX15_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04055 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 3059 3727 . - 0 ID=cds-KKZ55221.1;Parent=gene-AAX15_04055;Dbxref=NCBI_GP:KKZ55221.1;Name=KKZ55221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638716.1;locus_tag=AAX15_04055;product=amino acid ABC transporter permease;protein_id=KKZ55221.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 3717 4376 . - . ID=gene-AAX15_04060;Name=AAX15_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04060 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 3717 4376 . - 0 ID=cds-KKZ55222.1;Parent=gene-AAX15_04060;Dbxref=NCBI_GP:KKZ55222.1;Name=KKZ55222.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639540.1;locus_tag=AAX15_04060;product=amino acid ABC transporter;protein_id=KKZ55222.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 4518 5549 . - . ID=gene-AAX15_04065;Name=AAX15_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04065 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 4518 5549 . - 0 ID=cds-KKZ55223.1;Parent=gene-AAX15_04065;Dbxref=NCBI_GP:KKZ55223.1;Name=KKZ55223.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500042.1;locus_tag=AAX15_04065;product=branched-chain amino acid aminotransferase;protein_id=KKZ55223.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 6026 6919 . + . ID=gene-AAX15_04070;Name=AAX15_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04070 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 6026 6919 . + 0 ID=cds-KKZ55224.1;Parent=gene-AAX15_04070;Dbxref=NCBI_GP:KKZ55224.1;Name=KKZ55224.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634886.1;locus_tag=AAX15_04070;product=transcriptional regulator;protein_id=KKZ55224.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 6912 8003 . + . ID=gene-AAX15_04075;Name=AAX15_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04075 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 6912 8003 . + 0 ID=cds-KKZ55225.1;Parent=gene-AAX15_04075;Dbxref=NCBI_GP:KKZ55225.1;Name=KKZ55225.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45100.1;locus_tag=AAX15_04075;product=ribosomal RNA large subunit methyltransferase M;protein_id=KKZ55225.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 8039 9208 . + . ID=gene-AAX15_04080;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AAX15_04080 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 8039 9208 . + 0 ID=cds-KKZ55226.1;Parent=gene-AAX15_04080;Dbxref=NCBI_GP:KKZ55226.1;Name=KKZ55226.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550899.1;locus_tag=AAX15_04080;product=succinyl-CoA synthetase subunit beta;protein_id=KKZ55226.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 9208 10077 . + . ID=gene-AAX15_04085;Name=AAX15_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04085 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 9208 10077 . + 0 ID=cds-KKZ55227.1;Parent=gene-AAX15_04085;Dbxref=NCBI_GP:KKZ55227.1;Name=KKZ55227.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626296.1;locus_tag=AAX15_04085;product=succinyl-CoA synthetase subunit alpha;protein_id=KKZ55227.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 10212 10835 . + . ID=gene-AAX15_04090;Name=AAX15_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04090 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 10212 10835 . + 0 ID=cds-KKZ55228.1;Parent=gene-AAX15_04090;Dbxref=NCBI_GP:KKZ55228.1;Name=KKZ55228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500037.1;locus_tag=AAX15_04090;product=hypothetical protein;protein_id=KKZ55228.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 10883 11956 . + . ID=gene-AAX15_04095;Name=AAX15_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04095 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 10883 11956 . + 0 ID=cds-KKZ55229.1;Parent=gene-AAX15_04095;Dbxref=NCBI_GP:KKZ55229.1;Name=KKZ55229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653704.1;locus_tag=AAX15_04095;product=ribosomal large subunit pseudouridine synthase B;protein_id=KKZ55229.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 11968 12939 . + . ID=gene-AAX15_04100;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AAX15_04100 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 11968 12939 . + 0 ID=cds-KKZ55230.1;Parent=gene-AAX15_04100;Dbxref=NCBI_GP:KKZ55230.1;Name=KKZ55230.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642215.1;locus_tag=AAX15_04100;product=CysB family transcriptional regulator;protein_id=KKZ55230.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 12994 14058 . - . ID=gene-AAX15_04105;Name=AAX15_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04105 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 12994 14058 . - 0 ID=cds-KKZ55231.1;Parent=gene-AAX15_04105;Dbxref=NCBI_GP:KKZ55231.1;Name=KKZ55231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500034.1;locus_tag=AAX15_04105;product=ABC transporter permease;protein_id=KKZ55231.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 14162 15106 . - . ID=gene-AAX15_04110;Name=AAX15_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04110 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 14162 15106 . - 0 ID=cds-KKZ55232.1;Parent=gene-AAX15_04110;Dbxref=NCBI_GP:KKZ55232.1;Name=KKZ55232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996489.1;locus_tag=AAX15_04110;product=50S ribosomal protein L30;protein_id=KKZ55232.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 15236 15739 . + . ID=gene-AAX15_04115;Name=AAX15_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04115 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 15236 15739 . + 0 ID=cds-KKZ55233.1;Parent=gene-AAX15_04115;Dbxref=NCBI_GP:KKZ55233.1;Name=KKZ55233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44126.1;locus_tag=AAX15_04115;product=hypothetical protein;protein_id=KKZ55233.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 15816 17951 . - . ID=gene-AAX15_04120;Name=AAX15_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04120 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 15816 17951 . - 0 ID=cds-KKZ55234.1;Parent=gene-AAX15_04120;Dbxref=NCBI_GP:KKZ55234.1;Name=KKZ55234.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356701.1;locus_tag=AAX15_04120;product=phosphate acetyltransferase;protein_id=KKZ55234.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 18019 19224 . - . ID=gene-AAX15_04125;Name=AAX15_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04125 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 18019 19224 . - 0 ID=cds-KKZ55235.1;Parent=gene-AAX15_04125;Dbxref=NCBI_GP:KKZ55235.1;Name=KKZ55235.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689262.1;locus_tag=AAX15_04125;product=acetate kinase;protein_id=KKZ55235.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 19446 19889 . + . ID=gene-AAX15_04130;Name=AAX15_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04130 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 19446 19889 . + 0 ID=cds-KKZ55236.1;Parent=gene-AAX15_04130;Dbxref=NCBI_GP:KKZ55236.1;Name=KKZ55236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL94.1;locus_tag=AAX15_04130;product=membrane protein;protein_id=KKZ55236.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 19976 20467 . + . ID=gene-AAX15_04135;Name=AAX15_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04135 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 19976 20467 . + 0 ID=cds-KKZ55237.1;Parent=gene-AAX15_04135;Dbxref=NCBI_GP:KKZ55237.1;Name=KKZ55237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45108.1;locus_tag=AAX15_04135;product=colicin V synthesis protein;protein_id=KKZ55237.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 20478 21995 . + . ID=gene-AAX15_04140;Name=AAX15_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04140 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 20478 21995 . + 0 ID=cds-KKZ55238.1;Parent=gene-AAX15_04140;Dbxref=NCBI_GP:KKZ55238.1;Name=KKZ55238.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647425.1;locus_tag=AAX15_04140;product=amidophosphoribosyltransferase;protein_id=KKZ55238.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 22062 22952 . - . ID=gene-AAX15_04145;Name=AAX15_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04145 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 22062 22952 . - 0 ID=cds-KKZ55239.1;Parent=gene-AAX15_04145;Dbxref=NCBI_GP:KKZ55239.1;Name=KKZ55239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657112.1;locus_tag=AAX15_04145;product=epimerase;protein_id=KKZ55239.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 22952 23407 . - . ID=gene-AAX15_04150;Name=AAX15_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04150 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 22952 23407 . - 0 ID=cds-KKZ55240.1;Parent=gene-AAX15_04150;Dbxref=NCBI_GP:KKZ55240.1;Name=KKZ55240.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663775.1;locus_tag=AAX15_04150;product=arginine repressor;protein_id=KKZ55240.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 23613 24548 . + . ID=gene-AAX15_04155;Name=AAX15_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04155 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 23613 24548 . + 0 ID=cds-KKZ55241.1;Parent=gene-AAX15_04155;Dbxref=NCBI_GP:KKZ55241.1;Name=KKZ55241.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL89.1;locus_tag=AAX15_04155;product=malate dehydrogenase;protein_id=KKZ55241.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 24634 26142 . - . ID=gene-AAX15_04160;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AAX15_04160 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 24634 26142 . - 0 ID=cds-KKZ55242.1;Parent=gene-AAX15_04160;Dbxref=NCBI_GP:KKZ55242.1;Name=KKZ55242.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCQ0.1;locus_tag=AAX15_04160;product=lysine--tRNA ligase;protein_id=KKZ55242.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 26255 27106 . - . ID=gene-AAX15_04165;Name=AAX15_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04165 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 26255 27106 . - 0 ID=cds-KKZ55243.1;Parent=gene-AAX15_04165;Dbxref=NCBI_GP:KKZ55243.1;Name=KKZ55243.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638673.1;locus_tag=AAX15_04165;product=peptide chain release factor 2;protein_id=KKZ55243.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 27486 28175 . + . ID=gene-AAX15_04170;Name=AAX15_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04170 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 27486 28175 . + 0 ID=cds-KKZ55244.1;Parent=gene-AAX15_04170;Dbxref=NCBI_GP:KKZ55244.1;Name=KKZ55244.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646598.1;locus_tag=AAX15_04170;product=protein-disulfide isomerase;protein_id=KKZ55244.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 28251 29978 . + . ID=gene-AAX15_04175;Name=AAX15_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04175 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 28251 29978 . + 0 ID=cds-KKZ55245.1;Parent=gene-AAX15_04175;Dbxref=NCBI_GP:KKZ55245.1;Name=KKZ55245.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646651.1;locus_tag=AAX15_04175;product=ssDNA exonuclease RecJ;protein_id=KKZ55245.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 29971 30675 . + . ID=gene-AAX15_04180;Name=AAX15_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04180 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 29971 30675 . + 0 ID=cds-KKZ55246.1;Parent=gene-AAX15_04180;Dbxref=NCBI_GP:KKZ55246.1;Name=KKZ55246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638664.1;locus_tag=AAX15_04180;product=hypothetical protein;protein_id=KKZ55246.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 30675 31364 . + . ID=gene-AAX15_04185;Name=AAX15_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04185 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 30675 31364 . + 0 ID=cds-KKZ55247.1;Parent=gene-AAX15_04185;Dbxref=NCBI_GP:KKZ55247.1;Name=KKZ55247.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500022.1;locus_tag=AAX15_04185;product=5'-methylthioadenosine nucleosidase;protein_id=KKZ55247.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 31460 34327 . - . ID=gene-AAX15_04190;Name=AAX15_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04190 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 31460 34327 . - 0 ID=cds-KKZ55248.1;Parent=gene-AAX15_04190;Dbxref=NCBI_GP:KKZ55248.1;Name=KKZ55248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638229.1;locus_tag=AAX15_04190;product=TonB-dependent receptor;protein_id=KKZ55248.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 34602 35279 . + . ID=gene-AAX15_04195;Name=AAX15_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04195 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 34602 35279 . + 0 ID=cds-KKZ55249.1;Parent=gene-AAX15_04195;Dbxref=NCBI_GP:KKZ55249.1;Name=KKZ55249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500020.1;locus_tag=AAX15_04195;product=cytidylate kinase;protein_id=KKZ55249.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 35376 37025 . + . ID=gene-AAX15_04200;Name=AAX15_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04200 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 35376 37025 . + 0 ID=cds-KKZ55250.1;Parent=gene-AAX15_04200;Dbxref=NCBI_GP:KKZ55250.1;Name=KKZ55250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005716621.1;locus_tag=AAX15_04200;product=30S ribosomal protein S1;protein_id=KKZ55250.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 37147 37428 . + . ID=gene-AAX15_04205;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AAX15_04205 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 37147 37428 . + 0 ID=cds-KKZ55251.1;Parent=gene-AAX15_04205;Dbxref=NCBI_GP:KKZ55251.1;Name=KKZ55251.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642180.1;locus_tag=AAX15_04205;product=integration host factor subunit beta;protein_id=KKZ55251.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 37509 37802 . + . ID=gene-AAX15_04210;Name=AAX15_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04210 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 37509 37802 . + 0 ID=cds-KKZ55252.1;Parent=gene-AAX15_04210;Dbxref=NCBI_GP:KKZ55252.1;Name=KKZ55252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652934.1;locus_tag=AAX15_04210;product=membrane protein;protein_id=KKZ55252.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 37802 38992 . + . ID=gene-AAX15_04215;Name=AAX15_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04215 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 37802 38992 . + 0 ID=cds-KKZ55253.1;Parent=gene-AAX15_04215;Dbxref=NCBI_GP:KKZ55253.1;Name=KKZ55253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646619.1;locus_tag=AAX15_04215;product=hypothetical protein;protein_id=KKZ55253.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 39016 39708 . + . ID=gene-AAX15_04220;Name=AAX15_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04220 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 39016 39708 . + 0 ID=cds-KKZ55254.1;Parent=gene-AAX15_04220;Dbxref=NCBI_GP:KKZ55254.1;Name=KKZ55254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638221.1;locus_tag=AAX15_04220;product=orotidine 5'-phosphate decarboxylase;protein_id=KKZ55254.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 39714 40034 . + . ID=gene-AAX15_04225;Name=AAX15_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04225 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 39714 40034 . + 0 ID=cds-KKZ55255.1;Parent=gene-AAX15_04225;Dbxref=NCBI_GP:KKZ55255.1;Name=KKZ55255.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634815.1;locus_tag=AAX15_04225;product=translation initiation factor Sui1;protein_id=KKZ55255.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 40064 40759 . - . ID=gene-AAX15_04230;Name=AAX15_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04230 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 40064 40759 . - 0 ID=cds-KKZ55256.1;Parent=gene-AAX15_04230;Dbxref=NCBI_GP:KKZ55256.1;Name=KKZ55256.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961892.1;locus_tag=AAX15_04230;product=DNA replication initiation factor;protein_id=KKZ55256.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 40830 42074 . - . ID=gene-AAX15_04235;Name=AAX15_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04235 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 40830 42074 . - 0 ID=cds-KKZ55257.1;Parent=gene-AAX15_04235;Dbxref=NCBI_GP:KKZ55257.1;Name=KKZ55257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687348.1;locus_tag=AAX15_04235;product=uracil transporter;protein_id=KKZ55257.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 42185 42811 . - . ID=gene-AAX15_04240;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AAX15_04240 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 42185 42811 . - 0 ID=cds-KKZ55258.1;Parent=gene-AAX15_04240;Dbxref=NCBI_GP:KKZ55258.1;Name=KKZ55258.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628844.1;locus_tag=AAX15_04240;product=uracil phosphoribosyltransferase;protein_id=KKZ55258.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 42935 45001 . - . ID=gene-AAX15_04245;Name=AAX15_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04245 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 42935 45001 . - 0 ID=cds-KKZ55259.1;Parent=gene-AAX15_04245;Dbxref=NCBI_GP:KKZ55259.1;Name=KKZ55259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43746.1;locus_tag=AAX15_04245;product=DNA polymerase III subunit gamma/tau;protein_id=KKZ55259.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 45013 45555 . - . ID=gene-AAX15_04250;Name=AAX15_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04250 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 45013 45555 . - 0 ID=cds-KKZ55260.1;Parent=gene-AAX15_04250;Dbxref=NCBI_GP:KKZ55260.1;Name=KKZ55260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550691.1;locus_tag=AAX15_04250;product=adenine phosphoribosyltransferase;protein_id=KKZ55260.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 45714 47138 . - . ID=gene-AAX15_04255;Name=AAX15_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04255 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 45714 47138 . - 0 ID=cds-KKZ55261.1;Parent=gene-AAX15_04255;Dbxref=NCBI_GP:KKZ55261.1;Name=KKZ55261.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272714.1;locus_tag=AAX15_04255;product=dihydrolipoamide dehydrogenase;protein_id=KKZ55261.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 47239 49128 . - . ID=gene-AAX15_04260;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=AAX15_04260 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 47239 49128 . - 0 ID=cds-KKZ55262.1;Parent=gene-AAX15_04260;Dbxref=NCBI_GP:KKZ55262.1;Name=KKZ55262.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638204.1;locus_tag=AAX15_04260;product=pyruvate dehydrogenase;protein_id=KKZ55262.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 49192 51852 . - . ID=gene-AAX15_04265;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AAX15_04265 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 49192 51852 . - 0 ID=cds-KKZ55263.1;Parent=gene-AAX15_04265;Dbxref=NCBI_GP:KKZ55263.1;Name=KKZ55263.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628834.1;locus_tag=AAX15_04265;product=pyruvate dehydrogenase;protein_id=KKZ55263.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 52155 52613 . + . ID=gene-AAX15_04270;Name=AAX15_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04270 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 52155 52613 . + 0 ID=cds-KKZ55264.1;Parent=gene-AAX15_04270;Dbxref=NCBI_GP:KKZ55264.1;Name=KKZ55264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646625.1;locus_tag=AAX15_04270;product=methylglyoxal synthase;protein_id=KKZ55264.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 52682 54121 . - . ID=gene-AAX15_04275;Name=AAX15_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04275 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 52682 54121 . - 0 ID=cds-KKZ55265.1;Parent=gene-AAX15_04275;Dbxref=NCBI_GP:KKZ55265.1;Name=KKZ55265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500008.1;locus_tag=AAX15_04275;product=hypothetical protein;protein_id=KKZ55265.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 54373 56280 . + . ID=gene-AAX15_04280;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AAX15_04280 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 54373 56280 . + 0 ID=cds-KKZ55266.1;Parent=gene-AAX15_04280;Dbxref=NCBI_GP:KKZ55266.1;Name=KKZ55266.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670448.1;locus_tag=AAX15_04280;product=molecular chaperone DnaK;protein_id=KKZ55266.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 56515 56919 . + . ID=gene-AAX15_04285;Name=AAX15_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04285 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 56515 56919 . + 0 ID=cds-KKZ55267.1;Parent=gene-AAX15_04285;Dbxref=NCBI_GP:KKZ55267.1;Name=KKZ55267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642159.1;locus_tag=AAX15_04285;product=transcriptional regulator;protein_id=KKZ55267.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 56982 58130 . + . ID=gene-AAX15_04290;Name=AAX15_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04290 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 56982 58130 . + 0 ID=cds-KKZ55268.1;Parent=gene-AAX15_04290;Dbxref=NCBI_GP:KKZ55268.1;Name=KKZ55268.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500004.1;locus_tag=AAX15_04290;product=molecular chaperone DnaJ;protein_id=KKZ55268.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 58209 59462 . - . ID=gene-AAX15_04295;Name=AAX15_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04295 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 58209 59462 . - 0 ID=cds-KKZ55269.1;Parent=gene-AAX15_04295;Dbxref=NCBI_GP:KKZ55269.1;Name=KKZ55269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJW6.1;locus_tag=AAX15_04295;product=gamma-glutamyl phosphate reductase;protein_id=KKZ55269.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 59483 60145 . - . ID=gene-AAX15_04300;Name=AAX15_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04300 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 59483 60145 . - 0 ID=cds-KKZ55270.1;Parent=gene-AAX15_04300;Dbxref=NCBI_GP:KKZ55270.1;Name=KKZ55270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652973.1;locus_tag=AAX15_04300;product=membrane protein;protein_id=KKZ55270.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 60242 61042 . + . ID=gene-AAX15_04305;Name=AAX15_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04305 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 60242 61042 . + 0 ID=cds-KKZ55271.1;Parent=gene-AAX15_04305;Dbxref=NCBI_GP:KKZ55271.1;Name=KKZ55271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646555.1;locus_tag=AAX15_04305;product=hypothetical protein;protein_id=KKZ55271.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 61042 61908 . + . ID=gene-AAX15_04310;Name=AAX15_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04310 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 61042 61908 . + 0 ID=cds-KKZ55272.1;Parent=gene-AAX15_04310;Dbxref=NCBI_GP:KKZ55272.1;Name=KKZ55272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642150.1;locus_tag=AAX15_04310;product=membrane protein;protein_id=KKZ55272.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 61959 63161 . - . ID=gene-AAX15_04315;Name=AAX15_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04315 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 61959 63161 . - 0 ID=cds-KKZ55273.1;Parent=gene-AAX15_04315;Dbxref=NCBI_GP:KKZ55273.1;Name=KKZ55273.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642148.1;locus_tag=AAX15_04315;product=bicyclomycin/multidrug efflux system;protein_id=KKZ55273.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 63163 63861 . - . ID=gene-AAX15_04320;Name=AAX15_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04320 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 63163 63861 . - 0 ID=cds-KKZ55274.1;Parent=gene-AAX15_04320;Dbxref=NCBI_GP:KKZ55274.1;Name=KKZ55274.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630777.1;locus_tag=AAX15_04320;product=16S rRNA pseudouridylate synthase;protein_id=KKZ55274.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 63959 64579 . - . ID=gene-AAX15_04325;Name=AAX15_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04325 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 63959 64579 . - 0 ID=cds-KKZ55275.1;Parent=gene-AAX15_04325;Dbxref=NCBI_GP:KKZ55275.1;Name=KKZ55275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692328.1;locus_tag=AAX15_04325;product=hypothetical protein;protein_id=KKZ55275.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 64776 67046 . + . ID=gene-AAX15_04330;Name=AAX15_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04330 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 64776 67046 . + 0 ID=cds-KKZ55276.1;Parent=gene-AAX15_04330;Dbxref=NCBI_GP:KKZ55276.1;Name=KKZ55276.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687322.1;locus_tag=AAX15_04330;product=malic enzyme;protein_id=KKZ55276.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 67318 69243 . + . ID=gene-AAX15_04335;Name=AAX15_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04335 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 67318 69243 . + 0 ID=cds-KKZ55277.1;Parent=gene-AAX15_04335;Dbxref=NCBI_GP:KKZ55277.1;Name=KKZ55277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702143.1;locus_tag=AAX15_04335;product=hypothetical protein;protein_id=KKZ55277.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 69273 71312 . - . ID=gene-AAX15_04340;Name=AAX15_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04340 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 69273 71312 . - 0 ID=cds-KKZ55278.1;Parent=gene-AAX15_04340;Dbxref=NCBI_GP:KKZ55278.1;Name=KKZ55278.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628806.1;locus_tag=AAX15_04340;product=excinuclease ABC subunit B;protein_id=KKZ55278.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 71748 71823 . + . ID=gene-AAX15_04345;Name=AAX15_04345;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_04345 GCA_001008275.1|LCTH01000029.1 tRNAscan-SE tRNA 71748 71823 . + . ID=rna-AAX15_04345;Parent=gene-AAX15_04345;anticodon=(pos:71781..71783);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04345;product=tRNA-Asn GCA_001008275.1|LCTH01000029.1 tRNAscan-SE exon 71748 71823 . + . ID=exon-AAX15_04345-1;Parent=rna-AAX15_04345;anticodon=(pos:71781..71783);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04345;product=tRNA-Asn GCA_001008275.1|LCTH01000029.1 Genbank gene 71926 72894 . - . ID=gene-AAX15_04350;Name=AAX15_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04350 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 71926 72894 . - 0 ID=cds-KKZ55279.1;Parent=gene-AAX15_04350;Dbxref=NCBI_GP:KKZ55279.1;Name=KKZ55279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640356.1;locus_tag=AAX15_04350;product=cobalt transporter;protein_id=KKZ55279.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 72897 73517 . - . ID=gene-AAX15_04355;Name=AAX15_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04355 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 72897 73517 . - 0 ID=cds-KKZ55280.1;Parent=gene-AAX15_04355;Dbxref=NCBI_GP:KKZ55280.1;Name=KKZ55280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634759.1;locus_tag=AAX15_04355;product=hypothetical protein;protein_id=KKZ55280.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 73842 75512 . + . ID=gene-AAX15_04360;Name=AAX15_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04360 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 73842 75512 . + 0 ID=cds-KKZ55281.1;Parent=gene-AAX15_04360;Dbxref=NCBI_GP:KKZ55281.1;Name=KKZ55281.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710213.1;locus_tag=AAX15_04360;product=ABC transporter ATP-binding protein;protein_id=KKZ55281.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 75574 75915 . + . ID=gene-AAX15_04365;Name=AAX15_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04365 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 75574 75915 . + 0 ID=cds-KKZ55282.1;Parent=gene-AAX15_04365;Dbxref=NCBI_GP:KKZ55282.1;Name=KKZ55282.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634743.1;locus_tag=AAX15_04365;product=hypothetical protein;protein_id=KKZ55282.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 75920 77764 . + . ID=gene-AAX15_04370;Name=AAX15_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04370 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 75920 77764 . + 0 ID=cds-KKZ55283.1;Parent=gene-AAX15_04370;Dbxref=NCBI_GP:KKZ55283.1;Name=KKZ55283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646479.1;locus_tag=AAX15_04370;product=tRNA(Met) cytidine acetyltransferase;protein_id=KKZ55283.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 78037 81477 . + . ID=gene-AAX15_04375;Name=AAX15_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04375 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 78037 81477 . + 0 ID=cds-KKZ55284.1;Parent=gene-AAX15_04375;Dbxref=NCBI_GP:KKZ55284.1;Name=KKZ55284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637026.1;locus_tag=AAX15_04375;product=transcription-repair coupling factor;protein_id=KKZ55284.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 81530 82921 . - . ID=gene-AAX15_04380;Name=AAX15_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04380 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 81530 82921 . - 0 ID=cds-KKZ55285.1;Parent=gene-AAX15_04380;Dbxref=NCBI_GP:KKZ55285.1;Name=KKZ55285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666745.1;locus_tag=AAX15_04380;product=serine peptidase;protein_id=KKZ55285.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 83124 84014 . + . ID=gene-AAX15_04385;Name=AAX15_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04385 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 83124 84014 . + 0 ID=cds-KKZ55286.1;Parent=gene-AAX15_04385;Dbxref=NCBI_GP:KKZ55286.1;Name=KKZ55286.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666747.1;locus_tag=AAX15_04385;product=acetyl-CoA carboxylase subunit beta;protein_id=KKZ55286.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 84016 85320 . + . ID=gene-AAX15_04390;Name=AAX15_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04390 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 84016 85320 . + 0 ID=cds-KKZ55287.1;Parent=gene-AAX15_04390;Dbxref=NCBI_GP:KKZ55287.1;Name=KKZ55287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634729.1;locus_tag=AAX15_04390;product=folylpolyglutamate synthase;protein_id=KKZ55287.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 85324 86010 . - . ID=gene-AAX15_04395;Name=AAX15_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04395 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 85324 86010 . - 0 ID=cds-KKZ55288.1;Parent=gene-AAX15_04395;Dbxref=NCBI_GP:KKZ55288.1;Name=KKZ55288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646669.1;locus_tag=AAX15_04395;product=membrane protein;protein_id=KKZ55288.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 86168 87244 . + . ID=gene-AAX15_04400;Name=AAX15_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04400 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 86168 87244 . + 0 ID=cds-KKZ55289.1;Parent=gene-AAX15_04400;Dbxref=NCBI_GP:KKZ55289.1;Name=KKZ55289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659627.1;locus_tag=AAX15_04400;product=homoserine acetyltransferase;protein_id=KKZ55289.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 87342 88676 . - . ID=gene-AAX15_04405;Name=AAX15_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04405 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 87342 88676 . - 0 ID=cds-KKZ55290.1;Parent=gene-AAX15_04405;Dbxref=NCBI_GP:KKZ55290.1;Name=KKZ55290.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654923.1;locus_tag=AAX15_04405;product=argininosuccinate synthase;protein_id=KKZ55290.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 88853 89725 . - . ID=gene-AAX15_04410;Name=AAX15_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04410 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 88853 89725 . - 0 ID=cds-KKZ55291.1;Parent=gene-AAX15_04410;Dbxref=NCBI_GP:KKZ55291.1;Name=KKZ55291.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFF7.1;locus_tag=AAX15_04410;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=KKZ55291.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 89894 92251 . - . ID=gene-AAX15_04415;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=AAX15_04415 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 89894 92251 . - 0 ID=cds-KKZ55292.1;Parent=gene-AAX15_04415;Dbxref=NCBI_GP:KKZ55292.1;Name=KKZ55292.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635880.1;locus_tag=AAX15_04415;product=bifunctional glycosyl transferase/transpeptidase;protein_id=KKZ55292.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 92258 92611 . - . ID=gene-AAX15_04420;Name=AAX15_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04420 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 92258 92611 . - 0 ID=cds-KKZ55293.1;Parent=gene-AAX15_04420;Dbxref=NCBI_GP:KKZ55293.1;Name=KKZ55293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500972.1;locus_tag=AAX15_04420;product=hypothetical protein;protein_id=KKZ55293.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 92613 92957 . - . ID=gene-AAX15_04425;Name=AAX15_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04425 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 92613 92957 . - 0 ID=cds-KKZ55294.1;Parent=gene-AAX15_04425;Dbxref=NCBI_GP:KKZ55294.1;Name=KKZ55294.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500973.1;locus_tag=AAX15_04425;product=iron-sulfur cluster insertion protein ErpA;protein_id=KKZ55294.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 93094 93900 . + . ID=gene-AAX15_04430;Name=AAX15_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04430 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 93094 93900 . + 0 ID=cds-KKZ55295.1;Parent=gene-AAX15_04430;Dbxref=NCBI_GP:KKZ55295.1;Name=KKZ55295.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635885.1;locus_tag=AAX15_04430;product=methionine aminopeptidase;protein_id=KKZ55295.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 93994 96585 . + . ID=gene-AAX15_04435;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AAX15_04435 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 93994 96585 . + 0 ID=cds-KKZ55296.1;Parent=gene-AAX15_04435;Dbxref=NCBI_GP:KKZ55296.1;Name=KKZ55296.1;gbkey=CDS;gene=glnD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995773.1;locus_tag=AAX15_04435;product=protein-PII uridylyltransferase;protein_id=KKZ55296.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 96771 98921 . + . ID=gene-AAX15_04440;Name=AAX15_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04440 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 96771 98921 . + 0 ID=cds-KKZ55297.1;Parent=gene-AAX15_04440;Dbxref=NCBI_GP:KKZ55297.1;Name=KKZ55297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:YP_214456.1%2CRefSeq:YP_006488658.1;locus_tag=AAX15_04440;product=hypothetical protein;protein_id=KKZ55297.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 98893 99432 . + . ID=gene-AAX15_04445;Name=AAX15_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04445 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 98893 99432 . + 0 ID=cds-KKZ55298.1;Parent=gene-AAX15_04445;Dbxref=NCBI_GP:KKZ55298.1;Name=KKZ55298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632603.1;locus_tag=AAX15_04445;product=hypothetical protein;protein_id=KKZ55298.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 99584 100651 . + . ID=gene-AAX15_04450;Name=AAX15_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04450 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 99584 100651 . + 0 ID=cds-KKZ55299.1;Parent=gene-AAX15_04450;Dbxref=NCBI_GP:KKZ55299.1;Name=KKZ55299.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688044.1;locus_tag=AAX15_04450;product=UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase;protein_id=KKZ55299.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 100783 100858 . - . ID=gene-AAX15_04455;Name=AAX15_04455;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_04455 GCA_001008275.1|LCTH01000029.1 tRNAscan-SE tRNA 100783 100858 . - . ID=rna-AAX15_04455;Parent=gene-AAX15_04455;anticodon=(pos:complement(100823..100825));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04455;product=tRNA-Gly GCA_001008275.1|LCTH01000029.1 tRNAscan-SE exon 100783 100858 . - . ID=exon-AAX15_04455-1;Parent=rna-AAX15_04455;anticodon=(pos:complement(100823..100825));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04455;product=tRNA-Gly GCA_001008275.1|LCTH01000029.1 Genbank gene 100883 100958 . - . ID=gene-AAX15_04460;Name=AAX15_04460;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_04460 GCA_001008275.1|LCTH01000029.1 tRNAscan-SE tRNA 100883 100958 . - . ID=rna-AAX15_04460;Parent=gene-AAX15_04460;anticodon=(pos:complement(100923..100925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04460;product=tRNA-Gly GCA_001008275.1|LCTH01000029.1 tRNAscan-SE exon 100883 100958 . - . ID=exon-AAX15_04460-1;Parent=rna-AAX15_04460;anticodon=(pos:complement(100923..100925));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04460;product=tRNA-Gly GCA_001008275.1|LCTH01000029.1 Genbank gene 101052 101600 . - . ID=gene-AAX15_04465;Name=AAX15_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04465 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 101052 101600 . - 0 ID=cds-KKZ55300.1;Parent=gene-AAX15_04465;Dbxref=NCBI_GP:KKZ55300.1;Name=KKZ55300.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664903.1;locus_tag=AAX15_04465;product=oligoribonuclease;protein_id=KKZ55300.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 101671 102711 . + . ID=gene-AAX15_04470;Name=AAX15_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04470 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 101671 102711 . + 0 ID=cds-KKZ55301.1;Parent=gene-AAX15_04470;Dbxref=NCBI_GP:KKZ55301.1;Name=KKZ55301.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644975.1;locus_tag=AAX15_04470;product=GTPase RsgA;protein_id=KKZ55301.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 102874 103131 . + . ID=gene-AAX15_04475;Name=AAX15_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04475 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 102874 103131 . + 0 ID=cds-KKZ55302.1;Parent=gene-AAX15_04475;Dbxref=NCBI_GP:KKZ55302.1;Name=KKZ55302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695633.1;locus_tag=AAX15_04475;product=PTS sugar transporter;protein_id=KKZ55302.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 103210 104937 . + . ID=gene-AAX15_04480;Name=AAX15_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04480 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 103210 104937 . + 0 ID=cds-KKZ55303.1;Parent=gene-AAX15_04480;Dbxref=NCBI_GP:KKZ55303.1;Name=KKZ55303.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638824.1;locus_tag=AAX15_04480;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=KKZ55303.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 104998 105498 . + . ID=gene-AAX15_04485;Name=AAX15_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04485 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 104998 105498 . + 0 ID=cds-KKZ55304.1;Parent=gene-AAX15_04485;Dbxref=NCBI_GP:KKZ55304.1;Name=KKZ55304.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688036.1;locus_tag=AAX15_04485;product=PTS system glucose-specific transporter subunit IIA;protein_id=KKZ55304.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 105592 106791 . + . ID=gene-AAX15_04490;Name=AAX15_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04490 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 105592 106791 . + 0 ID=cds-KKZ55305.1;Parent=gene-AAX15_04490;Dbxref=NCBI_GP:KKZ55305.1;Name=KKZ55305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500979.1;locus_tag=AAX15_04490;product=mannose-6-phosphate isomerase;protein_id=KKZ55305.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 106871 107788 . + . ID=gene-AAX15_04495;Name=AAX15_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04495 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 106871 107788 . + 0 ID=cds-KKZ55306.1;Parent=gene-AAX15_04495;Dbxref=NCBI_GP:KKZ55306.1;Name=KKZ55306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640426.1;locus_tag=AAX15_04495;product=protease;protein_id=KKZ55306.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 107872 108327 . + . ID=gene-AAX15_04500;Name=AAX15_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04500 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 107872 108327 . + 0 ID=cds-KKZ55307.1;Parent=gene-AAX15_04500;Dbxref=NCBI_GP:KKZ55307.1;Name=KKZ55307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628415.1;locus_tag=AAX15_04500;product=membrane protein;protein_id=KKZ55307.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 108422 109189 . - . ID=gene-AAX15_04505;Name=AAX15_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04505 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 108422 109189 . - 0 ID=cds-KKZ55308.1;Parent=gene-AAX15_04505;Dbxref=NCBI_GP:KKZ55308.1;Name=KKZ55308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661102.1;locus_tag=AAX15_04505;product=transcriptional regulator;protein_id=KKZ55308.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 109327 110091 . + . ID=gene-AAX15_04510;Name=AAX15_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04510 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 109327 110091 . + 0 ID=cds-KKZ55309.1;Parent=gene-AAX15_04510;Dbxref=NCBI_GP:KKZ55309.1;Name=KKZ55309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688013.1;locus_tag=AAX15_04510;product=molybdate-binding protein;protein_id=KKZ55309.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 110226 110954 . + . ID=gene-AAX15_04515;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=AAX15_04515 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 110226 110954 . + 0 ID=cds-KKZ55310.1;Parent=gene-AAX15_04515;Dbxref=NCBI_GP:KKZ55310.1;Name=KKZ55310.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628423.1;locus_tag=AAX15_04515;product=molybdate ABC transporter permease;protein_id=KKZ55310.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 110941 111996 . + . ID=gene-AAX15_04520;Name=AAX15_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04520 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 110941 111996 . + 0 ID=cds-KKZ55311.1;Parent=gene-AAX15_04520;Dbxref=NCBI_GP:KKZ55311.1;Name=KKZ55311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995812.1;locus_tag=AAX15_04520;product=molybdenum ABC transporter ATP-binding protein;protein_id=KKZ55311.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 112360 114387 . + . ID=gene-AAX15_04525;Name=AAX15_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04525 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 112360 114387 . + 0 ID=cds-KKZ55312.1;Parent=gene-AAX15_04525;Dbxref=NCBI_GP:KKZ55312.1;Name=KKZ55312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995786.1;locus_tag=AAX15_04525;product=transporter;protein_id=KKZ55312.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 114423 115898 . - . ID=gene-AAX15_04530;Name=AAX15_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04530 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 114423 115898 . - 0 ID=cds-KKZ55313.1;Parent=gene-AAX15_04530;Dbxref=NCBI_GP:KKZ55313.1;Name=KKZ55313.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702491.1;locus_tag=AAX15_04530;product=multifunctional aminopeptidase A;protein_id=KKZ55313.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 116005 117099 . + . ID=gene-AAX15_04535;Name=AAX15_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04535 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 116005 117099 . + 0 ID=cds-KKZ55314.1;Parent=gene-AAX15_04535;Dbxref=NCBI_GP:KKZ55314.1;Name=KKZ55314.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640442.1;locus_tag=AAX15_04535;product=lipopolysaccharide ABC transporter permease;protein_id=KKZ55314.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 117105 118181 . + . ID=gene-AAX15_04540;Name=AAX15_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04540 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 117105 118181 . + 0 ID=cds-KKZ55315.1;Parent=gene-AAX15_04540;Dbxref=NCBI_GP:KKZ55315.1;Name=KKZ55315.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628434.1;locus_tag=AAX15_04540;product=lipopolysaccharide ABC transporter permease;protein_id=KKZ55315.1;transl_table=11 GCA_001008275.1|LCTH01000029.1 Genbank gene 118268 119110 . + . ID=gene-AAX15_04545;Name=AAX15_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04545 GCA_001008275.1|LCTH01000029.1 Protein Homology CDS 118268 119110 . + 0 ID=cds-KKZ55316.1;Parent=gene-AAX15_04545;Dbxref=NCBI_GP:KKZ55316.1;Name=KKZ55316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500996.1;locus_tag=AAX15_04545;product=serine protease;protein_id=KKZ55316.1;transl_table=11 ##sequence-region LCTH01000030.1 1 7610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000030.1 Genbank region 1 7610 . + . ID=LCTH01000030.1:1..7610;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000030.1 Genbank gene 122 658 . - . ID=gene-AAX15_04550;Name=AAX15_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04550 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 122 658 . - 0 ID=cds-KKZ55172.1;Parent=gene-AAX15_04550;Dbxref=NCBI_GP:KKZ55172.1;Name=KKZ55172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654957.1;locus_tag=AAX15_04550;product=DNA transformation protein;protein_id=KKZ55172.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 1161 2225 . + . ID=gene-AAX15_04555;Name=AAX15_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04555 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 1161 2225 . + 0 ID=cds-KKZ55173.1;Parent=gene-AAX15_04555;Dbxref=NCBI_GP:KKZ55173.1;Name=KKZ55173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640802.1;locus_tag=AAX15_04555;product=recombinase RecA;protein_id=KKZ55173.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 2305 2757 . + . ID=gene-AAX15_04560;Name=AAX15_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04560 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 2305 2757 . + 0 ID=cds-KKZ55174.1;Parent=gene-AAX15_04560;Dbxref=NCBI_GP:KKZ55174.1;Name=KKZ55174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654961.1;locus_tag=AAX15_04560;product=RecX family transcriptional regulator;protein_id=KKZ55174.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 2760 3146 . - . ID=gene-AAX15_04565;Name=AAX15_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04565 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 2760 3146 . - 0 ID=cds-KKZ55175.1;Parent=gene-AAX15_04565;Dbxref=NCBI_GP:KKZ55175.1;Name=KKZ55175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694571.1;locus_tag=AAX15_04565;product=chromosome condensation protein CrcB;protein_id=KKZ55175.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 3146 3964 . - . ID=gene-AAX15_04570;Name=AAX15_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04570 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 3146 3964 . - 0 ID=cds-KKZ55176.1;Parent=gene-AAX15_04570;Dbxref=NCBI_GP:KKZ55176.1;Name=KKZ55176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44771.1;locus_tag=AAX15_04570;product=membrane protein;protein_id=KKZ55176.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 4077 5099 . - . ID=gene-AAX15_04575;Name=AAX15_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04575 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 4077 5099 . - 0 ID=cds-KKZ55177.1;Parent=gene-AAX15_04575;Dbxref=NCBI_GP:KKZ55177.1;Name=KKZ55177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638332.1;locus_tag=AAX15_04575;product=flavodoxin reductase;protein_id=KKZ55177.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 5203 6855 . - . ID=gene-AAX15_04580;Name=AAX15_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04580 GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 5203 6855 . - 0 ID=cds-KKZ55178.1;Parent=gene-AAX15_04580;Dbxref=NCBI_GP:KKZ55178.1;Name=KKZ55178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644113.1;locus_tag=AAX15_04580;product=hydroxylamine reductase;protein_id=KKZ55178.1;transl_table=11 GCA_001008275.1|LCTH01000030.1 Genbank gene 7222 7610 . + . ID=gene-AAX15_04585;Name=AAX15_04585;end_range=7610,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04585;partial=true GCA_001008275.1|LCTH01000030.1 Protein Homology CDS 7222 7610 . + 0 ID=cds-KKZ55179.1;Parent=gene-AAX15_04585;Dbxref=NCBI_GP:KKZ55179.1;Name=KKZ55179.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;end_range=7610,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44770.1;locus_tag=AAX15_04585;partial=true;product=ornithine carbamoyltransferase;protein_id=KKZ55179.1;transl_table=11 ##sequence-region LCTH01000031.1 1 59985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000031.1 Genbank region 1 59985 . + . ID=LCTH01000031.1:1..59985;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000031.1 Genbank gene 108 572 . + . ID=gene-AAX15_04590;Name=AAX15_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04590 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 108 572 . + 0 ID=cds-KKZ55092.1;Parent=gene-AAX15_04590;Dbxref=NCBI_GP:KKZ55092.1;Name=KKZ55092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996417.1;locus_tag=AAX15_04590;product=membrane protein;protein_id=KKZ55092.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 794 2443 . - . ID=gene-AAX15_04595;Name=AAX15_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04595 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 794 2443 . - 0 ID=cds-KKZ55093.1;Parent=gene-AAX15_04595;Dbxref=NCBI_GP:KKZ55093.1;Name=KKZ55093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527751.1;locus_tag=AAX15_04595;product=glucose-6-phosphate isomerase;protein_id=KKZ55093.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 2550 3632 . - . ID=gene-AAX15_04600;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AAX15_04600 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 2550 3632 . - 0 ID=cds-KKZ55094.1;Parent=gene-AAX15_04600;Dbxref=NCBI_GP:KKZ55094.1;Name=KKZ55094.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550843.1;locus_tag=AAX15_04600;product=alanine racemase;protein_id=KKZ55094.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 3642 5048 . - . ID=gene-AAX15_04605;Name=AAX15_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04605 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 3642 5048 . - 0 ID=cds-KKZ55095.1;Parent=gene-AAX15_04605;Dbxref=NCBI_GP:KKZ55095.1;Name=KKZ55095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500638.1;locus_tag=AAX15_04605;product=DNA helicase;protein_id=KKZ55095.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 5190 6626 . - . ID=gene-AAX15_04610;Name=AAX15_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04610 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 5190 6626 . - 0 ID=cds-KKZ55096.1;Parent=gene-AAX15_04610;Dbxref=NCBI_GP:KKZ55096.1;Name=KKZ55096.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996412.1;locus_tag=AAX15_04610;product=pyruvate kinase;protein_id=KKZ55096.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 6856 6932 . + . ID=gene-AAX15_04615;Name=AAX15_04615;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_04615 GCA_001008275.1|LCTH01000031.1 tRNAscan-SE tRNA 6856 6932 . + . ID=rna-AAX15_04615;Parent=gene-AAX15_04615;anticodon=(pos:6890..6892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04615;product=tRNA-Val GCA_001008275.1|LCTH01000031.1 tRNAscan-SE exon 6856 6932 . + . ID=exon-AAX15_04615-1;Parent=rna-AAX15_04615;anticodon=(pos:6890..6892);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_04615;product=tRNA-Val GCA_001008275.1|LCTH01000031.1 Genbank gene 7067 7471 . - . ID=gene-AAX15_04620;Name=AAX15_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04620 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 7067 7471 . - 0 ID=cds-KKZ55097.1;Parent=gene-AAX15_04620;Dbxref=NCBI_GP:KKZ55097.1;Name=KKZ55097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638031.1;locus_tag=AAX15_04620;product=hypothetical protein;protein_id=KKZ55097.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 7502 7852 . - . ID=gene-AAX15_04625;Name=AAX15_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04625 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 7502 7852 . - 0 ID=cds-KKZ55098.1;Parent=gene-AAX15_04625;Dbxref=NCBI_GP:KKZ55098.1;Name=KKZ55098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996461.1;locus_tag=AAX15_04625;product=aminoacrylate peracid reductase;protein_id=KKZ55098.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 7964 8680 . + . ID=gene-AAX15_04630;Name=AAX15_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04630 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 7964 8680 . + 0 ID=cds-KKZ55099.1;Parent=gene-AAX15_04630;Dbxref=NCBI_GP:KKZ55099.1;Name=KKZ55099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500633.1;locus_tag=AAX15_04630;product=membrane protein;protein_id=KKZ55099.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 8681 9223 . + . ID=gene-AAX15_04635;Name=AAX15_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04635 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 8681 9223 . + 0 ID=cds-KKZ55100.1;Parent=gene-AAX15_04635;Dbxref=NCBI_GP:KKZ55100.1;Name=KKZ55100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689204.1;locus_tag=AAX15_04635;product=hypothetical protein;protein_id=KKZ55100.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 9237 9644 . - . ID=gene-AAX15_04640;Name=AAX15_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04640 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 9237 9644 . - 0 ID=cds-KKZ55101.1;Parent=gene-AAX15_04640;Dbxref=NCBI_GP:KKZ55101.1;Name=KKZ55101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629049.1;locus_tag=AAX15_04640;product=MerR family transcriptional regulator;protein_id=KKZ55101.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 9740 10423 . + . ID=gene-AAX15_04645;Name=AAX15_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04645 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 9740 10423 . + 0 ID=cds-KKZ55102.1;Parent=gene-AAX15_04645;Dbxref=NCBI_GP:KKZ55102.1;Name=KKZ55102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629048.1;locus_tag=AAX15_04645;product=membrane protein;protein_id=KKZ55102.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 10436 10921 . + . ID=gene-AAX15_04650;Name=AAX15_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04650 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 10436 10921 . + 0 ID=cds-KKZ55103.1;Parent=gene-AAX15_04650;Dbxref=NCBI_GP:KKZ55103.1;Name=KKZ55103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638020.1;locus_tag=AAX15_04650;product=hypothetical protein;protein_id=KKZ55103.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 10921 11541 . + . ID=gene-AAX15_04655;Name=AAX15_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04655 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 10921 11541 . + 0 ID=cds-KKZ55104.1;Parent=gene-AAX15_04655;Dbxref=NCBI_GP:KKZ55104.1;Name=KKZ55104.1;Note=catalyzes the ATP-dependent transport of cobalt;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644665.1;locus_tag=AAX15_04655;product=cobalamin biosynthesis protein CbiM;protein_id=KKZ55104.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 11541 12173 . + . ID=gene-AAX15_04660;Name=AAX15_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04660 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 11541 12173 . + 0 ID=cds-KKZ55105.1;Parent=gene-AAX15_04660;Dbxref=NCBI_GP:KKZ55105.1;Name=KKZ55105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702436.1;locus_tag=AAX15_04660;product=ABC transporter permease;protein_id=KKZ55105.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 12175 12792 . + . ID=gene-AAX15_04665;Name=AAX15_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04665 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 12175 12792 . + 0 ID=cds-KKZ55106.1;Parent=gene-AAX15_04665;Dbxref=NCBI_GP:KKZ55106.1;Name=KKZ55106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632426.1;locus_tag=AAX15_04665;product=cobalt ABC transporter ATP-binding protein;protein_id=KKZ55106.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 12940 13749 . + . ID=gene-AAX15_04670;Name=AAX15_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04670 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 12940 13749 . + 0 ID=cds-KKZ55107.1;Parent=gene-AAX15_04670;Dbxref=NCBI_GP:KKZ55107.1;Name=KKZ55107.1;Note=GTP hydrolase involved in nickel liganding into hydrogenases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001428016.1;locus_tag=AAX15_04670;product=hydrogenase nickel incorporation protein HypB;protein_id=KKZ55107.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 13753 14865 . + . ID=gene-AAX15_04675;Name=AAX15_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04675 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 13753 14865 . + 0 ID=cds-KKZ55108.1;Parent=gene-AAX15_04675;Dbxref=NCBI_GP:KKZ55108.1;Name=KKZ55108.1;Note=necessary for the synthesis of all three hydrogenase isoenzymes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638009.1;locus_tag=AAX15_04675;product=hydrogenase isoenzymes formation protein HypD;protein_id=KKZ55108.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 14867 15880 . + . ID=gene-AAX15_04680;Name=AAX15_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04680 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 14867 15880 . + 0 ID=cds-KKZ55109.1;Parent=gene-AAX15_04680;Dbxref=NCBI_GP:KKZ55109.1;Name=KKZ55109.1;Note=hydrogenase isoenzymes formation protein%3B involved in the formation of the cyanate group of the large subunit of the hydrogenase%3B catalyzes the formation of thiocyanate from thiocarbamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644812.1;locus_tag=AAX15_04680;product=carbamoyl dehydratase HypE;protein_id=KKZ55109.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 16724 17032 . - . ID=gene-AAX15_04685;Name=AAX15_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04685 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 16724 17032 . - 0 ID=cds-KKZ55110.1;Parent=gene-AAX15_04685;Dbxref=NCBI_GP:KKZ55110.1;Name=KKZ55110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702039.1;locus_tag=AAX15_04685;product=XRE family transcriptional regulator;protein_id=KKZ55110.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 17029 17376 . - . ID=gene-AAX15_04690;Name=AAX15_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04690 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 17029 17376 . - 0 ID=cds-KKZ55111.1;Parent=gene-AAX15_04690;Dbxref=NCBI_GP:KKZ55111.1;Name=KKZ55111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702038.1;locus_tag=AAX15_04690;product=toxin;protein_id=KKZ55111.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 17536 19338 . - . ID=gene-AAX15_04695;Name=AAX15_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04695 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 17536 19338 . - 0 ID=cds-KKZ55112.1;Parent=gene-AAX15_04695;Dbxref=NCBI_GP:KKZ55112.1;Name=KKZ55112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760466.1;locus_tag=AAX15_04695;product=hypothetical protein;protein_id=KKZ55112.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 19326 19718 . - . ID=gene-AAX15_04700;Name=AAX15_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04700 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 19326 19718 . - 0 ID=cds-KKZ55113.1;Parent=gene-AAX15_04700;Dbxref=NCBI_GP:KKZ55113.1;Name=KKZ55113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760684.1;locus_tag=AAX15_04700;product=hypothetical protein;protein_id=KKZ55113.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 19711 20370 . - . ID=gene-AAX15_04705;Name=AAX15_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04705 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 19711 20370 . - 0 ID=cds-KKZ55114.1;Parent=gene-AAX15_04705;Dbxref=NCBI_GP:KKZ55114.1;Name=KKZ55114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642345.1;locus_tag=AAX15_04705;product=hypothetical protein;protein_id=KKZ55114.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 20357 20557 . - . ID=gene-AAX15_04710;Name=AAX15_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04710 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 20357 20557 . - 0 ID=cds-KKZ55115.1;Parent=gene-AAX15_04710;Dbxref=NCBI_GP:KKZ55115.1;Name=KKZ55115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671866.1;locus_tag=AAX15_04710;product=hypothetical protein;protein_id=KKZ55115.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 20566 20748 . - . ID=gene-AAX15_04715;Name=AAX15_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04715 GCA_001008275.1|LCTH01000031.1 GeneMarkS+ CDS 20566 20748 . - 0 ID=cds-KKZ55116.1;Parent=gene-AAX15_04715;Dbxref=NCBI_GP:KKZ55116.1;Name=KKZ55116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_04715;product=hypothetical protein;protein_id=KKZ55116.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 20741 21238 . - . ID=gene-AAX15_04720;Name=AAX15_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04720 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 20741 21238 . - 0 ID=cds-KKZ55156.1;Parent=gene-AAX15_04720;Dbxref=NCBI_GP:KKZ55156.1;Name=KKZ55156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657515.1;locus_tag=AAX15_04720;product=Ash family protein;protein_id=KKZ55156.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Protein Homology pseudogene 21281 21691 . - . ID=gene-AAX15_04725;Name=AAX15_04725;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_04725;pseudo=true GCA_001008275.1|LCTH01000031.1 Genbank gene 22043 22846 . - . ID=gene-AAX15_04730;Name=AAX15_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04730 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 22043 22846 . - 0 ID=cds-KKZ55117.1;Parent=gene-AAX15_04730;Dbxref=NCBI_GP:KKZ55117.1;Name=KKZ55117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671859.1;locus_tag=AAX15_04730;product=antirepressor;protein_id=KKZ55117.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Protein Homology pseudogene 22968 23265 . - . ID=gene-AAX15_04735;Name=AAX15_04735;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_04735;pseudo=true GCA_001008275.1|LCTH01000031.1 Genbank gene 23316 23693 . - . ID=gene-AAX15_04740;Name=AAX15_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04740 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 23316 23693 . - 0 ID=cds-KKZ55118.1;Parent=gene-AAX15_04740;Dbxref=NCBI_GP:KKZ55118.1;Name=KKZ55118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759029.1;locus_tag=AAX15_04740;product=terminase;protein_id=KKZ55118.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 23772 24074 . - . ID=gene-AAX15_04745;Name=AAX15_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04745 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 23772 24074 . - 0 ID=cds-KKZ55119.1;Parent=gene-AAX15_04745;Dbxref=NCBI_GP:KKZ55119.1;Name=KKZ55119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671853.1;locus_tag=AAX15_04745;product=hypothetical protein;protein_id=KKZ55119.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 24098 24550 . - . ID=gene-AAX15_04750;Name=AAX15_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04750 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 24098 24550 . - 0 ID=cds-KKZ55120.1;Parent=gene-AAX15_04750;Dbxref=NCBI_GP:KKZ55120.1;Name=KKZ55120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641965.1;locus_tag=AAX15_04750;product=hypothetical protein;protein_id=KKZ55120.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 24564 24824 . - . ID=gene-AAX15_04755;Name=AAX15_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04755 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 24564 24824 . - 0 ID=cds-KKZ55121.1;Parent=gene-AAX15_04755;Dbxref=NCBI_GP:KKZ55121.1;Name=KKZ55121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642579.1;locus_tag=AAX15_04755;product=transcriptional regulator;protein_id=KKZ55121.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 24835 25083 . - . ID=gene-AAX15_04760;Name=AAX15_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04760 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 24835 25083 . - 0 ID=cds-KKZ55122.1;Parent=gene-AAX15_04760;Dbxref=NCBI_GP:KKZ55122.1;Name=KKZ55122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525757.1;locus_tag=AAX15_04760;product=prophage CP4-57 regulatory protein;protein_id=KKZ55122.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 25285 26226 . - . ID=gene-AAX15_04765;Name=AAX15_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04765 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 25285 26226 . - 0 ID=cds-KKZ55123.1;Parent=gene-AAX15_04765;Dbxref=NCBI_GP:KKZ55123.1;Name=KKZ55123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525758.1;locus_tag=AAX15_04765;product=hypothetical protein;protein_id=KKZ55123.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 26729 27985 . - . ID=gene-AAX15_04770;Name=AAX15_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04770 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 26729 27985 . - 0 ID=cds-KKZ55124.1;Parent=gene-AAX15_04770;Dbxref=NCBI_GP:KKZ55124.1;Name=KKZ55124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525759.1;locus_tag=AAX15_04770;product=integrase;protein_id=KKZ55124.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 28694 29197 . + . ID=gene-AAX15_04775;Name=AAX15_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04775 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 28694 29197 . + 0 ID=cds-KKZ55125.1;Parent=gene-AAX15_04775;Dbxref=NCBI_GP:KKZ55125.1;Name=KKZ55125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638005.1;locus_tag=AAX15_04775;product=hypothetical protein;protein_id=KKZ55125.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 29263 30330 . + . ID=gene-AAX15_04780;Name=AAX15_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04780 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 29263 30330 . + 0 ID=cds-KKZ55126.1;Parent=gene-AAX15_04780;Dbxref=NCBI_GP:KKZ55126.1;Name=KKZ55126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500619.1;locus_tag=AAX15_04780;product=DNA polymerase IV;protein_id=KKZ55126.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 30363 30899 . + . ID=gene-AAX15_04785;Name=AAX15_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04785 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 30363 30899 . + 0 ID=cds-KKZ55127.1;Parent=gene-AAX15_04785;Dbxref=NCBI_GP:KKZ55127.1;Name=KKZ55127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633467.1;locus_tag=AAX15_04785;product=ATPase;protein_id=KKZ55127.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 30993 32075 . + . ID=gene-AAX15_04790;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AAX15_04790 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 30993 32075 . + 0 ID=cds-KKZ55157.1;Parent=gene-AAX15_04790;Dbxref=NCBI_GP:KKZ55157.1;Name=KKZ55157.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962000.1;locus_tag=AAX15_04790;product=peptide chain release factor 1;protein_id=KKZ55157.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 32128 32568 . + . ID=gene-AAX15_04795;Name=AAX15_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04795 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 32128 32568 . + 0 ID=cds-KKZ55128.1;Parent=gene-AAX15_04795;Dbxref=NCBI_GP:KKZ55128.1;Name=KKZ55128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687758.1;locus_tag=AAX15_04795;product=hypothetical protein;protein_id=KKZ55128.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 32568 33446 . + . ID=gene-AAX15_04800;Name=AAX15_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04800 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 32568 33446 . + 0 ID=cds-KKZ55129.1;Parent=gene-AAX15_04800;Dbxref=NCBI_GP:KKZ55129.1;Name=KKZ55129.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702377.1;locus_tag=AAX15_04800;product=SAM-dependent methyltransferase;protein_id=KKZ55129.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 33446 34249 . + . ID=gene-AAX15_04805;Name=AAX15_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04805 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 33446 34249 . + 0 ID=cds-KKZ55130.1;Parent=gene-AAX15_04805;Dbxref=NCBI_GP:KKZ55130.1;Name=KKZ55130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633474.1;locus_tag=AAX15_04805;product=hypothetical protein;protein_id=KKZ55130.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 34264 35118 . + . ID=gene-AAX15_04810;Name=AAX15_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04810 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 34264 35118 . + 0 ID=cds-KKZ55131.1;Parent=gene-AAX15_04810;Dbxref=NCBI_GP:KKZ55131.1;Name=KKZ55131.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692899.1;locus_tag=AAX15_04810;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=KKZ55131.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 35206 35496 . + . ID=gene-AAX15_04815;Name=AAX15_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04815 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 35206 35496 . + 0 ID=cds-KKZ55132.1;Parent=gene-AAX15_04815;Dbxref=NCBI_GP:KKZ55132.1;Name=KKZ55132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526478.1;locus_tag=AAX15_04815;product=transposase;protein_id=KKZ55132.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 36028 37983 . + . ID=gene-AAX15_04820;Name=AAX15_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04820 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 36028 37983 . + 0 ID=cds-KKZ55133.1;Parent=gene-AAX15_04820;Dbxref=NCBI_GP:KKZ55133.1;Name=KKZ55133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500607.1;locus_tag=AAX15_04820;product=recombinase;protein_id=KKZ55133.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 38198 39145 . + . ID=gene-AAX15_04825;Name=AAX15_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04825 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 38198 39145 . + 0 ID=cds-KKZ55134.1;Parent=gene-AAX15_04825;Dbxref=NCBI_GP:KKZ55134.1;Name=KKZ55134.1;Note=Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692895.1;locus_tag=AAX15_04825;product=glycerate dehydrogenase;protein_id=KKZ55134.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 39145 40326 . + . ID=gene-AAX15_04830;Name=AAX15_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04830 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 39145 40326 . + 0 ID=cds-KKZ55135.1;Parent=gene-AAX15_04830;Dbxref=NCBI_GP:KKZ55135.1;Name=KKZ55135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996103.1;locus_tag=AAX15_04830;product=permease;protein_id=KKZ55135.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 40346 41638 . + . ID=gene-AAX15_04835;Name=AAX15_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04835 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 40346 41638 . + 0 ID=cds-KKZ55136.1;Parent=gene-AAX15_04835;Dbxref=NCBI_GP:KKZ55136.1;Name=KKZ55136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550833.1;locus_tag=AAX15_04835;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=KKZ55136.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 41647 42789 . + . ID=gene-AAX15_04840;Name=AAX15_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04840 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 41647 42789 . + 0 ID=cds-KKZ55137.1;Parent=gene-AAX15_04840;Dbxref=NCBI_GP:KKZ55137.1;Name=KKZ55137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633488.1;locus_tag=AAX15_04840;product=8-amino-7-oxononanoate synthase;protein_id=KKZ55137.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 42799 43446 . + . ID=gene-AAX15_04845;Name=AAX15_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04845 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 42799 43446 . + 0 ID=cds-KKZ55138.1;Parent=gene-AAX15_04845;Dbxref=NCBI_GP:KKZ55138.1;Name=KKZ55138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698507.1;locus_tag=AAX15_04845;product=hypothetical protein;protein_id=KKZ55138.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 43434 44216 . + . ID=gene-AAX15_04850;Name=AAX15_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04850 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 43434 44216 . + 0 ID=cds-KKZ55139.1;Parent=gene-AAX15_04850;Dbxref=NCBI_GP:KKZ55139.1;Name=KKZ55139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500600.1;locus_tag=AAX15_04850;product=malonyl-CoA O-methyltransferase;protein_id=KKZ55139.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 44226 44867 . + . ID=gene-AAX15_04855;Name=AAX15_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04855 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 44226 44867 . + 0 ID=cds-KKZ55140.1;Parent=gene-AAX15_04855;Dbxref=NCBI_GP:KKZ55140.1;Name=KKZ55140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500599.1;locus_tag=AAX15_04855;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=KKZ55140.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 44949 45632 . + . ID=gene-AAX15_04860;Name=AAX15_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04860 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 44949 45632 . + 0 ID=cds-KKZ55141.1;Parent=gene-AAX15_04860;Dbxref=NCBI_GP:KKZ55141.1;Name=KKZ55141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637962.1;locus_tag=AAX15_04860;product=ABC transporter ATP-binding protein;protein_id=KKZ55141.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 45632 46882 . + . ID=gene-AAX15_04865;Name=AAX15_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04865 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 45632 46882 . + 0 ID=cds-KKZ55142.1;Parent=gene-AAX15_04865;Dbxref=NCBI_GP:KKZ55142.1;Name=KKZ55142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644722.1;locus_tag=AAX15_04865;product=lipoprotein-releasing system transmembrane protein LolC;protein_id=KKZ55142.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 47101 48186 . + . ID=gene-AAX15_04870;Name=AAX15_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04870 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 47101 48186 . + 0 ID=cds-KKZ55143.1;Parent=gene-AAX15_04870;Dbxref=NCBI_GP:KKZ55143.1;Name=KKZ55143.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500596.1;locus_tag=AAX15_04870;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=KKZ55143.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 48257 48697 . - . ID=gene-AAX15_04875;Name=AAX15_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04875 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 48257 48697 . - 0 ID=cds-KKZ55144.1;Parent=gene-AAX15_04875;Dbxref=NCBI_GP:KKZ55144.1;Name=KKZ55144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641993.1;locus_tag=AAX15_04875;product=hypothetical protein;protein_id=KKZ55144.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 48985 50229 . + . ID=gene-AAX15_04880;Name=AAX15_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04880 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 48985 50229 . + 0 ID=cds-KKZ55145.1;Parent=gene-AAX15_04880;Dbxref=NCBI_GP:KKZ55145.1;Name=KKZ55145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633502.1;locus_tag=AAX15_04880;product=serine/threonine protein kinase;protein_id=KKZ55145.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 50350 50958 . + . ID=gene-AAX15_04885;Name=AAX15_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04885 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 50350 50958 . + 0 ID=cds-KKZ55146.1;Parent=gene-AAX15_04885;Dbxref=NCBI_GP:KKZ55146.1;Name=KKZ55146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45245.1;locus_tag=AAX15_04885;product=NAD(P)H oxidoreductase;protein_id=KKZ55146.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 50958 51512 . + . ID=gene-AAX15_04890;Name=AAX15_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04890 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 50958 51512 . + 0 ID=cds-KKZ55147.1;Parent=gene-AAX15_04890;Dbxref=NCBI_GP:KKZ55147.1;Name=KKZ55147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688490.1;locus_tag=AAX15_04890;product=hypothetical protein;protein_id=KKZ55147.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 51559 52113 . - . ID=gene-AAX15_04895;Name=AAX15_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04895 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 51559 52113 . - 0 ID=cds-KKZ55148.1;Parent=gene-AAX15_04895;Dbxref=NCBI_GP:KKZ55148.1;Name=KKZ55148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632356.1;locus_tag=AAX15_04895;product=NAD(P)H nitroreductase;protein_id=KKZ55148.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 52211 54061 . + . ID=gene-AAX15_04900;Name=AAX15_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04900 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 52211 54061 . + 0 ID=cds-KKZ55149.1;Parent=gene-AAX15_04900;Dbxref=NCBI_GP:KKZ55149.1;Name=KKZ55149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637946.1;locus_tag=AAX15_04900;product=protease;protein_id=KKZ55149.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 54127 56139 . - . ID=gene-AAX15_04905;Name=AAX15_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04905 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 54127 56139 . - 0 ID=cds-KKZ55150.1;Parent=gene-AAX15_04905;Dbxref=NCBI_GP:KKZ55150.1;Name=KKZ55150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644968.1;locus_tag=AAX15_04905;product=FAD-dependent cmnm(5)s(2)U34 oxidoreductase;protein_id=KKZ55150.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 56288 57508 . + . ID=gene-AAX15_04910;Name=AAX15_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04910 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 56288 57508 . + 0 ID=cds-KKZ55151.1;Parent=gene-AAX15_04910;Dbxref=NCBI_GP:KKZ55151.1;Name=KKZ55151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687800.1;locus_tag=AAX15_04910;product=3-oxoacyl-ACP synthase;protein_id=KKZ55151.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 57572 57835 . - . ID=gene-AAX15_04915;Name=AAX15_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04915 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 57572 57835 . - 0 ID=cds-KKZ55152.1;Parent=gene-AAX15_04915;Dbxref=NCBI_GP:KKZ55152.1;Name=KKZ55152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45242.1;locus_tag=AAX15_04915;product=glutaredoxin;protein_id=KKZ55152.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 57952 58866 . + . ID=gene-AAX15_04920;Name=AAX15_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04920 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 57952 58866 . + 0 ID=cds-KKZ55153.1;Parent=gene-AAX15_04920;Dbxref=NCBI_GP:KKZ55153.1;Name=KKZ55153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500583.1;locus_tag=AAX15_04920;product=ribosomal protein S6 modification protein;protein_id=KKZ55153.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 59106 59531 . + . ID=gene-AAX15_04925;Name=AAX15_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04925 GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 59106 59531 . + 0 ID=cds-KKZ55154.1;Parent=gene-AAX15_04925;Dbxref=NCBI_GP:KKZ55154.1;Name=KKZ55154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632336.1;locus_tag=AAX15_04925;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=KKZ55154.1;transl_table=11 GCA_001008275.1|LCTH01000031.1 Genbank gene 59580 59985 . + . ID=gene-AAX15_04930;Name=AAX15_04930;end_range=59985,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04930;partial=true GCA_001008275.1|LCTH01000031.1 Protein Homology CDS 59580 59985 . + 0 ID=cds-KKZ55155.1;Parent=gene-AAX15_04930;Dbxref=NCBI_GP:KKZ55155.1;Name=KKZ55155.1;end_range=59985,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628943.1;locus_tag=AAX15_04930;partial=true;product=formate dehydrogenase;protein_id=KKZ55155.1;transl_table=11 ##sequence-region LCTH01000032.1 1 76741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000032.1 Genbank region 1 76741 . + . ID=LCTH01000032.1:1..76741;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000032.1 Protein Homology pseudogene 876 3929 . - . ID=gene-AAX15_04935;Name=AAX15_04935;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_04935;pseudo=true GCA_001008275.1|LCTH01000032.1 Genbank gene 4281 6203 . + . ID=gene-AAX15_04940;Name=AAX15_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04940 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 4281 6203 . + 0 ID=cds-KKZ54960.1;Parent=gene-AAX15_04940;Dbxref=NCBI_GP:KKZ54960.1;Name=KKZ54960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636344.1;locus_tag=AAX15_04940;product=cobalamin receptor;protein_id=KKZ54960.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 6277 7062 . + . ID=gene-AAX15_04945;Name=AAX15_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04945 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 6277 7062 . + 0 ID=cds-KKZ54961.1;Parent=gene-AAX15_04945;Dbxref=NCBI_GP:KKZ54961.1;Name=KKZ54961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500829.1;locus_tag=AAX15_04945;product=helical backbone metal receptor;protein_id=KKZ54961.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 7090 8067 . + . ID=gene-AAX15_04950;Name=AAX15_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04950 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 7090 8067 . + 0 ID=cds-KKZ54962.1;Parent=gene-AAX15_04950;Dbxref=NCBI_GP:KKZ54962.1;Name=KKZ54962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644612.1;locus_tag=AAX15_04950;product=branched-chain alpha-keto acid dehydrogenase subunit E2;protein_id=KKZ54962.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 8067 8804 . + . ID=gene-AAX15_04955;Name=AAX15_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04955 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 8067 8804 . + 0 ID=cds-KKZ54963.1;Parent=gene-AAX15_04955;Dbxref=NCBI_GP:KKZ54963.1;Name=KKZ54963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636335.1;locus_tag=AAX15_04955;product=heme ABC transporter;protein_id=KKZ54963.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 8853 9320 . - . ID=gene-AAX15_04960;Name=AAX15_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04960 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 8853 9320 . - 0 ID=cds-KKZ54964.1;Parent=gene-AAX15_04960;Dbxref=NCBI_GP:KKZ54964.1;Name=KKZ54964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635044.1;locus_tag=AAX15_04960;product=hypothetical protein;protein_id=KKZ54964.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 9633 10958 . + . ID=gene-AAX15_04965;Name=AAX15_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04965 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 9633 10958 . + 0 ID=cds-KKZ54965.1;Parent=gene-AAX15_04965;Dbxref=NCBI_GP:KKZ54965.1;Name=KKZ54965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005801505.1;locus_tag=AAX15_04965;product=hypothetical protein;protein_id=KKZ54965.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 11007 14696 . - . ID=gene-AAX15_04970;Name=AAX15_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04970 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 11007 14696 . - 0 ID=cds-KKZ54966.1;Parent=gene-AAX15_04970;Dbxref=NCBI_GP:KKZ54966.1;Name=KKZ54966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644443.1;locus_tag=AAX15_04970;product=methionine synthase;protein_id=KKZ54966.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 14802 15308 . - . ID=gene-AAX15_04975;Name=AAX15_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04975 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 14802 15308 . - 0 ID=cds-KKZ54967.1;Parent=gene-AAX15_04975;Dbxref=NCBI_GP:KKZ54967.1;Name=KKZ54967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632850.1;locus_tag=AAX15_04975;product=hypothetical protein;protein_id=KKZ54967.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 15308 15919 . - . ID=gene-AAX15_04980;Name=AAX15_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04980 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 15308 15919 . - 0 ID=cds-KKZ54968.1;Parent=gene-AAX15_04980;Dbxref=NCBI_GP:KKZ54968.1;Name=KKZ54968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643101.1;locus_tag=AAX15_04980;product=Tat proofreading chaperone DmsD;protein_id=KKZ54968.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 16015 16854 . - . ID=gene-AAX15_04985;Name=AAX15_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04985 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 16015 16854 . - 0 ID=cds-KKZ54969.1;Parent=gene-AAX15_04985;Dbxref=NCBI_GP:KKZ54969.1;Name=KKZ54969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643104.1;locus_tag=AAX15_04985;product=dimethyl sulfoxide reductase;protein_id=KKZ54969.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 16856 17473 . - . ID=gene-AAX15_04990;Name=AAX15_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04990 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 16856 17473 . - 0 ID=cds-KKZ54970.1;Parent=gene-AAX15_04990;Dbxref=NCBI_GP:KKZ54970.1;Name=KKZ54970.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45003.1;locus_tag=AAX15_04990;product=dimethyl sulfoxide reductase;protein_id=KKZ54970.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 17484 19904 . - . ID=gene-AAX15_04995;Name=AAX15_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_04995 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 17484 19904 . - 0 ID=cds-KKZ55032.1;Parent=gene-AAX15_04995;Dbxref=NCBI_GP:KKZ55032.1;Name=KKZ55032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012073259.1;locus_tag=AAX15_04995;product=dimethyl sulfoxide reductase;protein_id=KKZ55032.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 20147 21253 . + . ID=gene-AAX15_05000;Name=AAX15_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05000 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 20147 21253 . + 0 ID=cds-KKZ54971.1;Parent=gene-AAX15_05000;Dbxref=NCBI_GP:KKZ54971.1;Name=KKZ54971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647785.1;locus_tag=AAX15_05000;product=hypothetical protein;protein_id=KKZ54971.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 21228 21590 . + . ID=gene-AAX15_05005;Name=AAX15_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05005 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 21228 21590 . + 0 ID=cds-KKZ54972.1;Parent=gene-AAX15_05005;Dbxref=NCBI_GP:KKZ54972.1;Name=KKZ54972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651689.1;locus_tag=AAX15_05005;product=membrane protein;protein_id=KKZ54972.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 21599 21877 . + . ID=gene-AAX15_05010;Name=AAX15_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05010 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 21599 21877 . + 0 ID=cds-KKZ54973.1;Parent=gene-AAX15_05010;Dbxref=NCBI_GP:KKZ54973.1;Name=KKZ54973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996602.1;locus_tag=AAX15_05010;product=hypothetical protein;protein_id=KKZ54973.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 21944 22516 . - . ID=gene-AAX15_05015;Name=AAX15_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05015 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 21944 22516 . - 0 ID=cds-KKZ54974.1;Parent=gene-AAX15_05015;Dbxref=NCBI_GP:KKZ54974.1;Name=KKZ54974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626862.1;locus_tag=AAX15_05015;product=superoxide dismutase;protein_id=KKZ54974.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 22604 22960 . - . ID=gene-AAX15_05020;Name=AAX15_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05020 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 22604 22960 . - 0 ID=cds-KKZ54975.1;Parent=gene-AAX15_05020;Dbxref=NCBI_GP:KKZ54975.1;Name=KKZ54975.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689448.1;locus_tag=AAX15_05020;product=dihydroneopterin aldolase;protein_id=KKZ54975.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 23043 23642 . + . ID=gene-AAX15_05025;Name=AAX15_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05025 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 23043 23642 . + 0 ID=cds-KKZ54976.1;Parent=gene-AAX15_05025;Dbxref=NCBI_GP:KKZ54976.1;Name=KKZ54976.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626856.1;locus_tag=AAX15_05025;product=glycerol-3-phosphate acyltransferase;protein_id=KKZ54976.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 23684 25387 . + . ID=gene-AAX15_05030;Name=AAX15_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05030 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 23684 25387 . + 0 ID=cds-KKZ54977.1;Parent=gene-AAX15_05030;Dbxref=NCBI_GP:KKZ54977.1;Name=KKZ54977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644332.1;locus_tag=AAX15_05030;product=ATPase;protein_id=KKZ54977.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 25463 26488 . + . ID=gene-AAX15_05035;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AAX15_05035 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 25463 26488 . + 0 ID=cds-KKZ54978.1;Parent=gene-AAX15_05035;Dbxref=NCBI_GP:KKZ54978.1;Name=KKZ54978.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644450.1;locus_tag=AAX15_05035;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=KKZ54978.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 26514 26825 . + . ID=gene-AAX15_05040;Name=AAX15_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05040 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 26514 26825 . + 0 ID=cds-KKZ54979.1;Parent=gene-AAX15_05040;Dbxref=NCBI_GP:KKZ54979.1;Name=KKZ54979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643124.1;locus_tag=AAX15_05040;product=RNA polymerase subunit sigma-32;protein_id=KKZ54979.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 26963 27808 . + . ID=gene-AAX15_05045;Name=AAX15_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05045 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 26963 27808 . + 0 ID=cds-KKZ54980.1;Parent=gene-AAX15_05045;Dbxref=NCBI_GP:KKZ54980.1;Name=KKZ54980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626842.1;locus_tag=AAX15_05045;product=RNA polymerase factor sigma-32;protein_id=KKZ54980.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 27861 28226 . - . ID=gene-AAX15_05050;Name=AAX15_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05050 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 27861 28226 . - 0 ID=cds-KKZ54981.1;Parent=gene-AAX15_05050;Dbxref=NCBI_GP:KKZ54981.1;Name=KKZ54981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643125.1;locus_tag=AAX15_05050;product=transcriptional regulator;protein_id=KKZ54981.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 28353 28922 . + . ID=gene-AAX15_05055;Name=AAX15_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05055 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 28353 28922 . + 0 ID=cds-KKZ54982.1;Parent=gene-AAX15_05055;Dbxref=NCBI_GP:KKZ54982.1;Name=KKZ54982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643128.1;locus_tag=AAX15_05055;product=integron protein cassette protein;protein_id=KKZ54982.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 28965 29900 . - . ID=gene-AAX15_05060;Name=AAX15_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05060 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 28965 29900 . - 0 ID=cds-KKZ54983.1;Parent=gene-AAX15_05060;Dbxref=NCBI_GP:KKZ54983.1;Name=KKZ54983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643129.1;locus_tag=AAX15_05060;product=tRNA-dihydrouridine synthase C;protein_id=KKZ54983.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 29900 30766 . - . ID=gene-AAX15_05065;Name=AAX15_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05065 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 29900 30766 . - 0 ID=cds-KKZ54984.1;Parent=gene-AAX15_05065;Dbxref=NCBI_GP:KKZ54984.1;Name=KKZ54984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686695.1;locus_tag=AAX15_05065;product=molecular chaperone DnaJ;protein_id=KKZ54984.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 30845 31486 . - . ID=gene-AAX15_05070;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AAX15_05070 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 30845 31486 . - 0 ID=cds-KKZ54985.1;Parent=gene-AAX15_05070;Dbxref=NCBI_GP:KKZ54985.1;Name=KKZ54985.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:SwissProt:P43855.1;locus_tag=AAX15_05070;product=orotate phosphoribosyltransferase;protein_id=KKZ54985.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 31510 32226 . - . ID=gene-AAX15_05075;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AAX15_05075 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 31510 32226 . - 0 ID=cds-KKZ54986.1;Parent=gene-AAX15_05075;Dbxref=NCBI_GP:KKZ54986.1;Name=KKZ54986.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668175.1;locus_tag=AAX15_05075;product=ribonuclease PH;protein_id=KKZ54986.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 32297 34039 . - . ID=gene-AAX15_05080;Name=AAX15_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05080 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 32297 34039 . - 0 ID=cds-KKZ54987.1;Parent=gene-AAX15_05080;Dbxref=NCBI_GP:KKZ54987.1;Name=KKZ54987.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644372.1;locus_tag=AAX15_05080;product=transporter;protein_id=KKZ54987.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 34164 34253 . + . ID=gene-AAX15_05085;Name=AAX15_05085;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05085 GCA_001008275.1|LCTH01000032.1 tRNAscan-SE tRNA 34164 34253 . + . ID=rna-AAX15_05085;Parent=gene-AAX15_05085;anticodon=(pos:34198..34200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05085;product=tRNA-Ser GCA_001008275.1|LCTH01000032.1 tRNAscan-SE exon 34164 34253 . + . ID=exon-AAX15_05085-1;Parent=rna-AAX15_05085;anticodon=(pos:34198..34200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05085;product=tRNA-Ser GCA_001008275.1|LCTH01000032.1 Genbank gene 34463 35665 . + . ID=gene-AAX15_05090;Name=AAX15_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05090 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 34463 35665 . + 0 ID=cds-KKZ54988.1;Parent=gene-AAX15_05090;Dbxref=NCBI_GP:KKZ54988.1;Name=KKZ54988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355442.1;locus_tag=AAX15_05090;product=integrase;protein_id=KKZ54988.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 35654 35899 . - . ID=gene-AAX15_05095;Name=AAX15_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05095 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 35654 35899 . - 0 ID=cds-KKZ54989.1;Parent=gene-AAX15_05095;Dbxref=NCBI_GP:KKZ54989.1;Name=KKZ54989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054922.1;locus_tag=AAX15_05095;product=transcriptional regulator;protein_id=KKZ54989.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 36374 36589 . + . ID=gene-AAX15_05100;Name=AAX15_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05100 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 36374 36589 . + 0 ID=cds-KKZ54990.1;Parent=gene-AAX15_05100;Dbxref=NCBI_GP:KKZ54990.1;Name=KKZ54990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054921.1;locus_tag=AAX15_05100;product=DNA-binding protein;protein_id=KKZ54990.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 36591 37292 . + . ID=gene-AAX15_05105;Name=AAX15_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05105 GCA_001008275.1|LCTH01000032.1 GeneMarkS+ CDS 36591 37292 . + 0 ID=cds-KKZ54991.1;Parent=gene-AAX15_05105;Dbxref=NCBI_GP:KKZ54991.1;Name=KKZ54991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_05105;product=hypothetical protein;protein_id=KKZ54991.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 37425 38399 . + . ID=gene-AAX15_05110;Name=AAX15_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05110 GCA_001008275.1|LCTH01000032.1 GeneMarkS+ CDS 37425 38399 . + 0 ID=cds-KKZ54992.1;Parent=gene-AAX15_05110;Dbxref=NCBI_GP:KKZ54992.1;Name=KKZ54992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_05110;product=hypothetical protein;protein_id=KKZ54992.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Protein Homology pseudogene 38752 39621 . + . ID=gene-AAX15_05115;Name=AAX15_05115;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_05115;pseudo=true GCA_001008275.1|LCTH01000032.1 Genbank gene 39878 40093 . + . ID=gene-AAX15_05120;Name=AAX15_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05120 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 39878 40093 . + 0 ID=cds-KKZ54993.1;Parent=gene-AAX15_05120;Dbxref=NCBI_GP:KKZ54993.1;Name=KKZ54993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054916.1;locus_tag=AAX15_05120;product=transcriptional regulator;protein_id=KKZ54993.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 40074 40304 . + . ID=gene-AAX15_05125;Name=AAX15_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05125 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 40074 40304 . + 0 ID=cds-KKZ54994.1;Parent=gene-AAX15_05125;Dbxref=NCBI_GP:KKZ54994.1;Name=KKZ54994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054915.1;locus_tag=AAX15_05125;product=transposase;protein_id=KKZ54994.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 40478 40954 . + . ID=gene-AAX15_05130;Name=AAX15_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05130 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 40478 40954 . + 0 ID=cds-KKZ55033.1;Parent=gene-AAX15_05130;Dbxref=NCBI_GP:KKZ55033.1;Name=KKZ55033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355452.1;locus_tag=AAX15_05130;product=hypothetical protein;protein_id=KKZ55033.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 40947 41186 . + . ID=gene-AAX15_05135;Name=AAX15_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05135 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 40947 41186 . + 0 ID=cds-KKZ54995.1;Parent=gene-AAX15_05135;Dbxref=NCBI_GP:KKZ54995.1;Name=KKZ54995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054914.1;locus_tag=AAX15_05135;product=hypothetical protein;protein_id=KKZ54995.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 41183 41407 . + . ID=gene-AAX15_05140;Name=AAX15_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05140 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 41183 41407 . + 0 ID=cds-KKZ54996.1;Parent=gene-AAX15_05140;Dbxref=NCBI_GP:KKZ54996.1;Name=KKZ54996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250238.1;locus_tag=AAX15_05140;product=hypothetical protein;protein_id=KKZ54996.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 41416 41694 . + . ID=gene-AAX15_05145;Name=AAX15_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05145 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 41416 41694 . + 0 ID=cds-KKZ54997.1;Parent=gene-AAX15_05145;Dbxref=NCBI_GP:KKZ54997.1;Name=KKZ54997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054912.1;locus_tag=AAX15_05145;product=hypothetical protein;protein_id=KKZ54997.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 41704 43911 . + . ID=gene-AAX15_05150;Name=AAX15_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05150 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 41704 43911 . + 0 ID=cds-KKZ54998.1;Parent=gene-AAX15_05150;Dbxref=NCBI_GP:KKZ54998.1;Name=KKZ54998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054911.1;locus_tag=AAX15_05150;product=hypothetical protein;protein_id=KKZ54998.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 44408 44662 . + . ID=gene-AAX15_05155;Name=AAX15_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05155 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 44408 44662 . + 0 ID=cds-KKZ54999.1;Parent=gene-AAX15_05155;Dbxref=NCBI_GP:KKZ54999.1;Name=KKZ54999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054910.1;locus_tag=AAX15_05155;product=stability protein StbD;protein_id=KKZ54999.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 44652 44942 . + . ID=gene-AAX15_05160;Name=AAX15_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05160 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 44652 44942 . + 0 ID=cds-KKZ55000.1;Parent=gene-AAX15_05160;Dbxref=NCBI_GP:KKZ55000.1;Name=KKZ55000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054909.1;locus_tag=AAX15_05160;product=RelE toxin;protein_id=KKZ55000.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 45377 45631 . + . ID=gene-AAX15_05165;Name=AAX15_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05165 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 45377 45631 . + 0 ID=cds-KKZ55034.1;Parent=gene-AAX15_05165;Dbxref=NCBI_GP:KKZ55034.1;Name=KKZ55034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054910.1;locus_tag=AAX15_05165;product=stability protein StbD;protein_id=KKZ55034.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 45834 46169 . - . ID=gene-AAX15_05170;Name=AAX15_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05170 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 45834 46169 . - 0 ID=cds-KKZ55001.1;Parent=gene-AAX15_05170;Dbxref=NCBI_GP:KKZ55001.1;Name=KKZ55001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651638.1;locus_tag=AAX15_05170;product=XRE family transcriptional regulator;protein_id=KKZ55001.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 46326 46772 . + . ID=gene-AAX15_05175;Name=AAX15_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05175 GCA_001008275.1|LCTH01000032.1 GeneMarkS+ CDS 46326 46772 . + 0 ID=cds-KKZ55002.1;Parent=gene-AAX15_05175;Dbxref=NCBI_GP:KKZ55002.1;Name=KKZ55002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_05175;product=hypothetical protein;protein_id=KKZ55002.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 46781 47191 . + . ID=gene-AAX15_05180;Name=AAX15_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05180 GCA_001008275.1|LCTH01000032.1 GeneMarkS+ CDS 46781 47191 . + 0 ID=cds-KKZ55003.1;Parent=gene-AAX15_05180;Dbxref=NCBI_GP:KKZ55003.1;Name=KKZ55003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_05180;product=hypothetical protein;protein_id=KKZ55003.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 47447 48670 . + . ID=gene-AAX15_05185;Name=AAX15_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05185 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 47447 48670 . + 0 ID=cds-KKZ55004.1;Parent=gene-AAX15_05185;Dbxref=NCBI_GP:KKZ55004.1;Name=KKZ55004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643136.1;locus_tag=AAX15_05185;product=MFS transporter;protein_id=KKZ55004.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 48714 49670 . - . ID=gene-AAX15_05190;Name=AAX15_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05190 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 48714 49670 . - 0 ID=cds-KKZ55005.1;Parent=gene-AAX15_05190;Dbxref=NCBI_GP:KKZ55005.1;Name=KKZ55005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500809.1;locus_tag=AAX15_05190;product=ADP-heptose--LPS heptosyltransferase;protein_id=KKZ55005.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 49667 50572 . - . ID=gene-AAX15_05195;Name=AAX15_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05195 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 49667 50572 . - 0 ID=cds-KKZ55006.1;Parent=gene-AAX15_05195;Dbxref=NCBI_GP:KKZ55006.1;Name=KKZ55006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644509.1;locus_tag=AAX15_05195;product=membrane protein;protein_id=KKZ55006.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 50569 51612 . - . ID=gene-AAX15_05200;Name=AAX15_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05200 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 50569 51612 . - 0 ID=cds-KKZ55007.1;Parent=gene-AAX15_05200;Dbxref=NCBI_GP:KKZ55007.1;Name=KKZ55007.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643141.1;locus_tag=AAX15_05200;product=ADP-heptose--LPS heptosyltransferase;protein_id=KKZ55007.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 51698 52624 . - . ID=gene-AAX15_05205;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AAX15_05205 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 51698 52624 . - 0 ID=cds-KKZ55008.1;Parent=gene-AAX15_05205;Dbxref=NCBI_GP:KKZ55008.1;Name=KKZ55008.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054491.1;locus_tag=AAX15_05205;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=KKZ55008.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 52677 53180 . - . ID=gene-AAX15_05210;Name=AAX15_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05210 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 52677 53180 . - 0 ID=cds-KKZ55009.1;Parent=gene-AAX15_05210;Dbxref=NCBI_GP:KKZ55009.1;Name=KKZ55009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643157.1;locus_tag=AAX15_05210;product=thioredoxin;protein_id=KKZ55009.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 53290 53961 . + . ID=gene-AAX15_05215;Name=AAX15_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05215 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 53290 53961 . + 0 ID=cds-KKZ55010.1;Parent=gene-AAX15_05215;Dbxref=NCBI_GP:KKZ55010.1;Name=KKZ55010.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCY8.1;locus_tag=AAX15_05215;product=deoxyribose-phosphate aldolase;protein_id=KKZ55010.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 53995 55524 . - . ID=gene-AAX15_05220;Name=AAX15_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05220 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 53995 55524 . - 0 ID=cds-KKZ55011.1;Parent=gene-AAX15_05220;Dbxref=NCBI_GP:KKZ55011.1;Name=KKZ55011.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661812.1;locus_tag=AAX15_05220;product=ATP-dependent protease;protein_id=KKZ55011.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 55639 56256 . - . ID=gene-AAX15_05225;Name=AAX15_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05225 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 55639 56256 . - 0 ID=cds-KKZ55012.1;Parent=gene-AAX15_05225;Dbxref=NCBI_GP:KKZ55012.1;Name=KKZ55012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644534.1;locus_tag=AAX15_05225;product=GTP-binding protein;protein_id=KKZ55012.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 56360 57226 . + . ID=gene-AAX15_05230;Name=AAX15_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05230 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 56360 57226 . + 0 ID=cds-KKZ55035.1;Parent=gene-AAX15_05230;Dbxref=NCBI_GP:KKZ55035.1;Name=KKZ55035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643166.1;locus_tag=AAX15_05230;product=membrane protein;protein_id=KKZ55035.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 57350 58303 . + . ID=gene-AAX15_05235;Name=AAX15_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05235 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 57350 58303 . + 0 ID=cds-KKZ55013.1;Parent=gene-AAX15_05235;Dbxref=NCBI_GP:KKZ55013.1;Name=KKZ55013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCY0.1;locus_tag=AAX15_05235;product=transaldolase;protein_id=KKZ55013.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 58391 59809 . - . ID=gene-AAX15_05240;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AAX15_05240 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 58391 59809 . - 0 ID=cds-KKZ55014.1;Parent=gene-AAX15_05240;Dbxref=NCBI_GP:KKZ55014.1;Name=KKZ55014.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635757.1;locus_tag=AAX15_05240;product=aspartate ammonia-lyase;protein_id=KKZ55014.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 59965 60777 . - . ID=gene-AAX15_05245;Name=AAX15_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05245 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 59965 60777 . - 0 ID=cds-KKZ55015.1;Parent=gene-AAX15_05245;Dbxref=NCBI_GP:KKZ55015.1;Name=KKZ55015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635756.1;locus_tag=AAX15_05245;product=urease accessory protein UreD;protein_id=KKZ55015.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 60831 61466 . - . ID=gene-AAX15_05250;Name=AAX15_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05250 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 60831 61466 . - 0 ID=cds-KKZ55016.1;Parent=gene-AAX15_05250;Dbxref=NCBI_GP:KKZ55016.1;Name=KKZ55016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636285.1;locus_tag=AAX15_05250;product=urease accessory protein UreG;protein_id=KKZ55016.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 61551 62258 . - . ID=gene-AAX15_05255;Name=AAX15_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05255 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 61551 62258 . - 0 ID=cds-KKZ55017.1;Parent=gene-AAX15_05255;Dbxref=NCBI_GP:KKZ55017.1;Name=KKZ55017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QN11.1;locus_tag=AAX15_05255;product=urease accessory protein UreF;protein_id=KKZ55017.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 62243 62800 . - . ID=gene-AAX15_05260;Name=AAX15_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05260 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 62243 62800 . - 0 ID=cds-KKZ55018.1;Parent=gene-AAX15_05260;Dbxref=NCBI_GP:KKZ55018.1;Name=KKZ55018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635753.1;locus_tag=AAX15_05260;product=urease accessory protein UreE;protein_id=KKZ55018.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 62823 63920 . - . ID=gene-AAX15_05265;Name=AAX15_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05265 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 62823 63920 . - 0 ID=cds-KKZ55019.1;Parent=gene-AAX15_05265;Dbxref=NCBI_GP:KKZ55019.1;Name=KKZ55019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500790.1;locus_tag=AAX15_05265;product=hypothetical protein;protein_id=KKZ55019.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 64069 65787 . - . ID=gene-AAX15_05270;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=AAX15_05270 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 64069 65787 . - 0 ID=cds-KKZ55020.1;Parent=gene-AAX15_05270;Dbxref=NCBI_GP:KKZ55020.1;Name=KKZ55020.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706620.1;locus_tag=AAX15_05270;product=urease subunit alpha;protein_id=KKZ55020.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 65799 66104 . - . ID=gene-AAX15_05275;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AAX15_05275 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 65799 66104 . - 0 ID=cds-KKZ55021.1;Parent=gene-AAX15_05275;Dbxref=NCBI_GP:KKZ55021.1;Name=KKZ55021.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta)%3B in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity%2C optimum growth%2C resistance to low-pH killing in-vitro and persistence in-vivo%2C while the other operon does not seem to be active;gbkey=CDS;gene=ureB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701724.1;locus_tag=AAX15_05275;product=urease subunit beta;protein_id=KKZ55021.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 66127 66429 . - . ID=gene-AAX15_05280;Name=AAX15_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05280 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 66127 66429 . - 0 ID=cds-KKZ55022.1;Parent=gene-AAX15_05280;Dbxref=NCBI_GP:KKZ55022.1;Name=KKZ55022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355722.1;locus_tag=AAX15_05280;product=urease subunit gamma;protein_id=KKZ55022.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 66598 66888 . + . ID=gene-AAX15_05285;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AAX15_05285 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 66598 66888 . + 0 ID=cds-KKZ55023.1;Parent=gene-AAX15_05285;Dbxref=NCBI_GP:KKZ55023.1;Name=KKZ55023.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356907.1;locus_tag=AAX15_05285;product=molecular chaperone GroES;protein_id=KKZ55023.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 66908 68551 . + . ID=gene-AAX15_05290;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=AAX15_05290 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 66908 68551 . + 0 ID=cds-KKZ55024.1;Parent=gene-AAX15_05290;Dbxref=NCBI_GP:KKZ55024.1;Name=KKZ55024.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664451.1;locus_tag=AAX15_05290;product=molecular chaperone GroEL;protein_id=KKZ55024.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 68661 69209 . + . ID=gene-AAX15_05295;Name=AAX15_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05295 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 68661 69209 . + 0 ID=cds-KKZ55025.1;Parent=gene-AAX15_05295;Dbxref=NCBI_GP:KKZ55025.1;Name=KKZ55025.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636269.1;locus_tag=AAX15_05295;product=hypothetical protein;protein_id=KKZ55025.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 69221 70513 . + . ID=gene-AAX15_05300;Name=AAX15_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05300 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 69221 70513 . + 0 ID=cds-KKZ55026.1;Parent=gene-AAX15_05300;Dbxref=NCBI_GP:KKZ55026.1;Name=KKZ55026.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44881.1;locus_tag=AAX15_05300;product=proline aminopeptidase P II;protein_id=KKZ55026.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 70615 71040 . + . ID=gene-AAX15_05305;Name=AAX15_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05305 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 70615 71040 . + 0 ID=cds-KKZ55027.1;Parent=gene-AAX15_05305;Dbxref=NCBI_GP:KKZ55027.1;Name=KKZ55027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696761.1;locus_tag=AAX15_05305;product=Universal stress protein A;protein_id=KKZ55027.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 71228 73852 . + . ID=gene-AAX15_05310;Name=AAX15_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05310 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 71228 73852 . + 0 ID=cds-KKZ55028.1;Parent=gene-AAX15_05310;Dbxref=NCBI_GP:KKZ55028.1;Name=KKZ55028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500778.1;locus_tag=AAX15_05310;product=alanyl-tRNA synthetase;protein_id=KKZ55028.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 73931 74122 . + . ID=gene-AAX15_05315;Name=AAX15_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05315 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 73931 74122 . + 0 ID=cds-KKZ55029.1;Parent=gene-AAX15_05315;Dbxref=NCBI_GP:KKZ55029.1;Name=KKZ55029.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625841.1;locus_tag=AAX15_05315;product=carbon storage regulator;protein_id=KKZ55029.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 74146 75033 . + . ID=gene-AAX15_05320;Name=AAX15_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05320 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 74146 75033 . + 0 ID=cds-KKZ55030.1;Parent=gene-AAX15_05320;Dbxref=NCBI_GP:KKZ55030.1;Name=KKZ55030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701865.1;locus_tag=AAX15_05320;product=nucleotidyl transferase;protein_id=KKZ55030.1;transl_table=11 GCA_001008275.1|LCTH01000032.1 Genbank gene 75168 76541 . + . ID=gene-AAX15_05325;Name=AAX15_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05325 GCA_001008275.1|LCTH01000032.1 Protein Homology CDS 75168 76541 . + 0 ID=cds-KKZ55031.1;Parent=gene-AAX15_05325;Dbxref=NCBI_GP:KKZ55031.1;Name=KKZ55031.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652406.1;locus_tag=AAX15_05325;product=argininosuccinate lyase;protein_id=KKZ55031.1;transl_table=11 ##sequence-region LCTH01000033.1 1 18810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000033.1 Genbank region 1 18810 . + . ID=LCTH01000033.1:1..18810;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000033.1 Genbank gene 1 839 . + . ID=gene-AAX15_05330;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AAX15_05330;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 1 839 . + 2 ID=cds-KKZ54711.1;Parent=gene-AAX15_05330;Dbxref=NCBI_GP:KKZ54711.1;Name=KKZ54711.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663096.1;locus_tag=AAX15_05330;partial=true;product=Hsp33-like chaperonin;protein_id=KKZ54711.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 1013 2629 . + . ID=gene-AAX15_05335;Name=AAX15_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05335 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 1013 2629 . + 0 ID=cds-KKZ54712.1;Parent=gene-AAX15_05335;Dbxref=NCBI_GP:KKZ54712.1;Name=KKZ54712.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356904.1;locus_tag=AAX15_05335;product=phosphoenolpyruvate carboxykinase;protein_id=KKZ54712.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 2780 3337 . + . ID=gene-AAX15_05340;Name=AAX15_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05340 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 2780 3337 . + 0 ID=cds-KKZ54713.1;Parent=gene-AAX15_05340;Dbxref=NCBI_GP:KKZ54713.1;Name=KKZ54713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686003.1;locus_tag=AAX15_05340;product=ribosome-recycling factor;protein_id=KKZ54713.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 3447 4640 . + . ID=gene-AAX15_05345;Name=AAX15_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05345 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 3447 4640 . + 0 ID=cds-KKZ54714.1;Parent=gene-AAX15_05345;Dbxref=NCBI_GP:KKZ54714.1;Name=KKZ54714.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643195.1;locus_tag=AAX15_05345;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=KKZ54714.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 4672 5481 . - . ID=gene-AAX15_05350;Name=AAX15_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05350 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 4672 5481 . - 0 ID=cds-KKZ54715.1;Parent=gene-AAX15_05350;Dbxref=NCBI_GP:KKZ54715.1;Name=KKZ54715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644380.1;locus_tag=AAX15_05350;product=membrane protein;protein_id=KKZ54715.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 5618 6697 . + . ID=gene-AAX15_05355;Name=AAX15_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05355 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 5618 6697 . + 0 ID=cds-KKZ54716.1;Parent=gene-AAX15_05355;Dbxref=NCBI_GP:KKZ54716.1;Name=KKZ54716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632770.1;locus_tag=AAX15_05355;product=sulfatase maturase;protein_id=KKZ54716.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 6806 7402 . + . ID=gene-AAX15_05360;Name=AAX15_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05360 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 6806 7402 . + 0 ID=cds-KKZ54717.1;Parent=gene-AAX15_05360;Dbxref=NCBI_GP:KKZ54717.1;Name=KKZ54717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500769.1;locus_tag=AAX15_05360;product=cAMP-binding protein;protein_id=KKZ54717.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 7523 7909 . - . ID=gene-AAX15_05365;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AAX15_05365 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 7523 7909 . - 0 ID=cds-KKZ54718.1;Parent=gene-AAX15_05365;Dbxref=NCBI_GP:KKZ54718.1;Name=KKZ54718.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632768.1;locus_tag=AAX15_05365;product=50S ribosomal protein L17;protein_id=KKZ54718.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 7950 8939 . - . ID=gene-AAX15_05370;Name=AAX15_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05370 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 7950 8939 . - 0 ID=cds-KKZ54719.1;Parent=gene-AAX15_05370;Dbxref=NCBI_GP:KKZ54719.1;Name=KKZ54719.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM97.1;locus_tag=AAX15_05370;product=DNA-directed RNA polymerase subunit alpha;protein_id=KKZ54719.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 8971 9591 . - . ID=gene-AAX15_05375;Name=AAX15_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05375 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 8971 9591 . - 0 ID=cds-KKZ54720.1;Parent=gene-AAX15_05375;Dbxref=NCBI_GP:KKZ54720.1;Name=KKZ54720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759597.1;locus_tag=AAX15_05375;product=30S ribosomal protein S4;protein_id=KKZ54720.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 9621 10010 . - . ID=gene-AAX15_05380;Name=AAX15_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05380 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 9621 10010 . - 0 ID=cds-KKZ54721.1;Parent=gene-AAX15_05380;Dbxref=NCBI_GP:KKZ54721.1;Name=KKZ54721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44379.2;locus_tag=AAX15_05380;product=30S ribosomal protein S11;protein_id=KKZ54721.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 10027 10383 . - . ID=gene-AAX15_05385;Name=AAX15_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05385 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 10027 10383 . - 0 ID=cds-KKZ54722.1;Parent=gene-AAX15_05385;Dbxref=NCBI_GP:KKZ54722.1;Name=KKZ54722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=AAX15_05385;product=30S ribosomal protein S13;protein_id=KKZ54722.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 10525 10638 . - . ID=gene-AAX15_05390;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AAX15_05390 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 10525 10638 . - 0 ID=cds-KKZ54723.1;Parent=gene-AAX15_05390;Dbxref=NCBI_GP:KKZ54723.1;Name=KKZ54723.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250018.1;locus_tag=AAX15_05390;product=50S ribosomal protein L36;protein_id=KKZ54723.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 10667 11992 . - . ID=gene-AAX15_05395;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AAX15_05395 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 10667 11992 . - 0 ID=cds-KKZ54724.1;Parent=gene-AAX15_05395;Dbxref=NCBI_GP:KKZ54724.1;Name=KKZ54724.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356919.1;locus_tag=AAX15_05395;product=preprotein translocase subunit SecY;protein_id=KKZ54724.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 12000 12434 . - . ID=gene-AAX15_05400;Name=AAX15_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05400 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 12000 12434 . - 0 ID=cds-KKZ54725.1;Parent=gene-AAX15_05400;Dbxref=NCBI_GP:KKZ54725.1;Name=KKZ54725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMA2.1;locus_tag=AAX15_05400;product=50S ribosomal protein L15;protein_id=KKZ54725.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 12438 12617 . - . ID=gene-AAX15_05405;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AAX15_05405 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 12438 12617 . - 0 ID=cds-KKZ54726.1;Parent=gene-AAX15_05405;Dbxref=NCBI_GP:KKZ54726.1;Name=KKZ54726.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356921.1;locus_tag=AAX15_05405;product=50S ribosomal protein L30;protein_id=KKZ54726.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 12624 13124 . - . ID=gene-AAX15_05410;Name=AAX15_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05410 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 12624 13124 . - 0 ID=cds-KKZ54727.1;Parent=gene-AAX15_05410;Dbxref=NCBI_GP:KKZ54727.1;Name=KKZ54727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356922.1;locus_tag=AAX15_05410;product=30S ribosomal protein S5;protein_id=KKZ54727.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 13139 13492 . - . ID=gene-AAX15_05415;Name=AAX15_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05415 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 13139 13492 . - 0 ID=cds-KKZ54728.1;Parent=gene-AAX15_05415;Dbxref=NCBI_GP:KKZ54728.1;Name=KKZ54728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7VKE9.1;locus_tag=AAX15_05415;product=50S ribosomal protein L18;protein_id=KKZ54728.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 13506 14039 . - . ID=gene-AAX15_05420;Name=AAX15_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05420 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 13506 14039 . - 0 ID=cds-KKZ54729.1;Parent=gene-AAX15_05420;Dbxref=NCBI_GP:KKZ54729.1;Name=KKZ54729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500767.1;locus_tag=AAX15_05420;product=50S ribosomal protein L6;protein_id=KKZ54729.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 14055 14447 . - . ID=gene-AAX15_05425;Name=AAX15_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05425 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 14055 14447 . - 0 ID=cds-KKZ54730.1;Parent=gene-AAX15_05425;Dbxref=NCBI_GP:KKZ54730.1;Name=KKZ54730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65QW9.1;locus_tag=AAX15_05425;product=30S ribosomal protein S8;protein_id=KKZ54730.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 14484 14789 . - . ID=gene-AAX15_05430;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AAX15_05430 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 14484 14789 . - 0 ID=cds-KKZ54731.1;Parent=gene-AAX15_05430;Dbxref=NCBI_GP:KKZ54731.1;Name=KKZ54731.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167559.1;locus_tag=AAX15_05430;product=30S ribosomal protein S14;protein_id=KKZ54731.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 14801 15340 . - . ID=gene-AAX15_05435;Name=AAX15_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05435 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 14801 15340 . - 0 ID=cds-KKZ54732.1;Parent=gene-AAX15_05435;Dbxref=NCBI_GP:KKZ54732.1;Name=KKZ54732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44346.2;locus_tag=AAX15_05435;product=50S ribosomal protein L5;protein_id=KKZ54732.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 15358 15669 . - . ID=gene-AAX15_05440;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AAX15_05440 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 15358 15669 . - 0 ID=cds-KKZ54733.1;Parent=gene-AAX15_05440;Dbxref=NCBI_GP:KKZ54733.1;Name=KKZ54733.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:SwissProt:P44362.1;locus_tag=AAX15_05440;product=50S ribosomal protein L24;protein_id=KKZ54733.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 15680 16051 . - . ID=gene-AAX15_05445;Name=AAX15_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05445 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 15680 16051 . - 0 ID=cds-KKZ54734.1;Parent=gene-AAX15_05445;Dbxref=NCBI_GP:KKZ54734.1;Name=KKZ54734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005590135.1;locus_tag=AAX15_05445;product=50S ribosomal protein L14;protein_id=KKZ54734.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 16284 16541 . - . ID=gene-AAX15_05450;Name=AAX15_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05450 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 16284 16541 . - 0 ID=cds-KKZ54735.1;Parent=gene-AAX15_05450;Dbxref=NCBI_GP:KKZ54735.1;Name=KKZ54735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005764317.1;locus_tag=AAX15_05450;product=30S ribosomal protein S17;protein_id=KKZ54735.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 16541 16732 . - . ID=gene-AAX15_05455;Name=AAX15_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05455 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 16541 16732 . - 0 ID=cds-KKZ54736.1;Parent=gene-AAX15_05455;Dbxref=NCBI_GP:KKZ54736.1;Name=KKZ54736.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695090.1;locus_tag=AAX15_05455;product=50S ribosomal protein L29;protein_id=KKZ54736.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 16732 17142 . - . ID=gene-AAX15_05460;Name=AAX15_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05460 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 16732 17142 . - 0 ID=cds-KKZ54737.1;Parent=gene-AAX15_05460;Dbxref=NCBI_GP:KKZ54737.1;Name=KKZ54737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AAX15_05460;product=50S ribosomal protein L16;protein_id=KKZ54737.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 17156 17863 . - . ID=gene-AAX15_05465;Name=AAX15_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05465 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 17156 17863 . - 0 ID=cds-KKZ54738.1;Parent=gene-AAX15_05465;Dbxref=NCBI_GP:KKZ54738.1;Name=KKZ54738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526115.1;locus_tag=AAX15_05465;product=30S ribosomal protein S3;protein_id=KKZ54738.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 17881 18213 . - . ID=gene-AAX15_05470;Name=AAX15_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05470 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 17881 18213 . - 0 ID=cds-KKZ54739.1;Parent=gene-AAX15_05470;Dbxref=NCBI_GP:KKZ54739.1;Name=KKZ54739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AAX15_05470;product=50S ribosomal protein L22;protein_id=KKZ54739.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 18225 18500 . - . ID=gene-AAX15_05475;Name=AAX15_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05475 GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 18225 18500 . - 0 ID=cds-KKZ54740.1;Parent=gene-AAX15_05475;Dbxref=NCBI_GP:KKZ54740.1;Name=KKZ54740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745959.1;locus_tag=AAX15_05475;product=30S ribosomal protein S19;protein_id=KKZ54740.1;transl_table=11 GCA_001008275.1|LCTH01000033.1 Genbank gene 18526 18810 . - . ID=gene-AAX15_05480;Name=AAX15_05480;end_range=18810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05480;partial=true GCA_001008275.1|LCTH01000033.1 Protein Homology CDS 18526 18810 . - 0 ID=cds-KKZ54741.1;Parent=gene-AAX15_05480;Dbxref=NCBI_GP:KKZ54741.1;Name=KKZ54741.1;end_range=18810,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805226.1;locus_tag=AAX15_05480;partial=true;product=50S ribosomal protein L2;protein_id=KKZ54741.1;transl_table=11 ##sequence-region LCTH01000034.1 1 46923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000034.1 Genbank region 1 46923 . + . ID=LCTH01000034.1:1..46923;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000034.1 Protein Homology pseudogene 135 900 . + . ID=gene-AAX15_05485;Name=AAX15_05485;Note=disrupted;description=glycosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_05485;pseudo=true GCA_001008275.1|LCTH01000034.1 Genbank gene 1007 2557 . + . ID=gene-AAX15_05490;Name=AAX15_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05490 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 1007 2557 . + 0 ID=cds-KKZ54609.1;Parent=gene-AAX15_05490;Dbxref=NCBI_GP:KKZ54609.1;Name=KKZ54609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638564.1;locus_tag=AAX15_05490;product=anthranilate synthase subunit I;protein_id=KKZ54609.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 2570 3151 . + . ID=gene-AAX15_05495;Name=AAX15_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05495 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 2570 3151 . + 0 ID=cds-KKZ54610.1;Parent=gene-AAX15_05495;Dbxref=NCBI_GP:KKZ54610.1;Name=KKZ54610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641831.1;locus_tag=AAX15_05495;product=anthranilate synthase subunit II;protein_id=KKZ54610.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 3200 3586 . + . ID=gene-AAX15_05500;Name=AAX15_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05500 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 3200 3586 . + 0 ID=cds-KKZ54611.1;Parent=gene-AAX15_05500;Dbxref=NCBI_GP:KKZ54611.1;Name=KKZ54611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631850.1;locus_tag=AAX15_05500;product=hypothetical protein;protein_id=KKZ54611.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 3639 4640 . + . ID=gene-AAX15_05505;Name=AAX15_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05505 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 3639 4640 . + 0 ID=cds-KKZ54612.1;Parent=gene-AAX15_05505;Dbxref=NCBI_GP:KKZ54612.1;Name=KKZ54612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641827.1;locus_tag=AAX15_05505;product=anthranilate phosphoribosyltransferase;protein_id=KKZ54612.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 4681 6120 . + . ID=gene-AAX15_05510;Name=AAX15_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05510 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 4681 6120 . + 0 ID=cds-KKZ54649.1;Parent=gene-AAX15_05510;Dbxref=NCBI_GP:KKZ54649.1;Name=KKZ54649.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636017.1;locus_tag=AAX15_05510;product=indole-3-glycerol phosphate synthase;protein_id=KKZ54649.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 6171 6554 . - . ID=gene-AAX15_05515;Name=AAX15_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05515 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 6171 6554 . - 0 ID=cds-KKZ54613.1;Parent=gene-AAX15_05515;Dbxref=NCBI_GP:KKZ54613.1;Name=KKZ54613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500321.1;locus_tag=AAX15_05515;product=transcriptional regulator;protein_id=KKZ54613.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 6715 7185 . + . ID=gene-AAX15_05520;Name=AAX15_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05520 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 6715 7185 . + 0 ID=cds-KKZ54614.1;Parent=gene-AAX15_05520;Dbxref=NCBI_GP:KKZ54614.1;Name=KKZ54614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014667337.1;locus_tag=AAX15_05520;product=hypothetical protein;protein_id=KKZ54614.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 7397 8542 . + . ID=gene-AAX15_05525;Name=AAX15_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05525 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 7397 8542 . + 0 ID=cds-KKZ54615.1;Parent=gene-AAX15_05525;Dbxref=NCBI_GP:KKZ54615.1;Name=KKZ54615.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636016.1;locus_tag=AAX15_05525;product=hydrogenase 2 small subunit;protein_id=KKZ54615.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 8545 9585 . + . ID=gene-AAX15_05530;Name=AAX15_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05530 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 8545 9585 . + 0 ID=cds-KKZ54616.1;Parent=gene-AAX15_05530;Dbxref=NCBI_GP:KKZ54616.1;Name=KKZ54616.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500324.1;locus_tag=AAX15_05530;product=hydrogenase 2 protein HybA;protein_id=KKZ54616.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 9578 10804 . + . ID=gene-AAX15_05535;Name=AAX15_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05535 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 9578 10804 . + 0 ID=cds-KKZ54617.1;Parent=gene-AAX15_05535;Dbxref=NCBI_GP:KKZ54617.1;Name=KKZ54617.1;Note=HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641821.1;locus_tag=AAX15_05535;product=hydrogenase 2 b cytochrome subunit;protein_id=KKZ54617.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 10804 12513 . + . ID=gene-AAX15_05540;Name=AAX15_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05540 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 10804 12513 . + 0 ID=cds-KKZ54618.1;Parent=gene-AAX15_05540;Dbxref=NCBI_GP:KKZ54618.1;Name=KKZ54618.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638557.1;locus_tag=AAX15_05540;product=hydrogenase 2 large subunit;protein_id=KKZ54618.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 12513 12986 . + . ID=gene-AAX15_05545;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=AAX15_05545 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 12513 12986 . + 0 ID=cds-KKZ54619.1;Parent=gene-AAX15_05545;Dbxref=NCBI_GP:KKZ54619.1;Name=KKZ54619.1;Note=protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC);gbkey=CDS;gene=hybD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500327.1;locus_tag=AAX15_05545;product=hydrogenase 2 maturation endopeptidase;protein_id=KKZ54619.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 13078 13587 . + . ID=gene-AAX15_05550;Name=AAX15_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05550 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 13078 13587 . + 0 ID=cds-KKZ54620.1;Parent=gene-AAX15_05550;Dbxref=NCBI_GP:KKZ54620.1;Name=KKZ54620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500328.1;locus_tag=AAX15_05550;product=hydrogenase;protein_id=KKZ54620.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 13617 13892 . + . ID=gene-AAX15_05555;Name=AAX15_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05555 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 13617 13892 . + 0 ID=cds-KKZ54621.1;Parent=gene-AAX15_05555;Dbxref=NCBI_GP:KKZ54621.1;Name=KKZ54621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631861.1;locus_tag=AAX15_05555;product=hydrogenase;protein_id=KKZ54621.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 13927 14742 . - . ID=gene-AAX15_05560;Name=AAX15_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05560 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 13927 14742 . - 0 ID=cds-KKZ54622.1;Parent=gene-AAX15_05560;Dbxref=NCBI_GP:KKZ54622.1;Name=KKZ54622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656702.1;locus_tag=AAX15_05560;product=hypothetical protein;protein_id=KKZ54622.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 14910 17774 . - . ID=gene-AAX15_05565;Name=AAX15_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05565 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 14910 17774 . - 0 ID=cds-KKZ54623.1;Parent=gene-AAX15_05565;Dbxref=NCBI_GP:KKZ54623.1;Name=KKZ54623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626490.1;locus_tag=AAX15_05565;product=valine--tRNA ligase;protein_id=KKZ54623.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Protein Homology pseudogene 18485 18790 . - . ID=gene-AAX15_05570;Name=AAX15_05570;Note=disrupted;description=valyl-tRNA synthetase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_05570;pseudo=true GCA_001008275.1|LCTH01000034.1 Genbank gene 18837 19367 . - . ID=gene-AAX15_05575;Name=AAX15_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05575 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 18837 19367 . - 0 ID=cds-KKZ54624.1;Parent=gene-AAX15_05575;Dbxref=NCBI_GP:KKZ54624.1;Name=KKZ54624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642359.1;locus_tag=AAX15_05575;product=hypothetical protein;protein_id=KKZ54624.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 19383 19817 . - . ID=gene-AAX15_05580;Name=AAX15_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05580 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 19383 19817 . - 0 ID=cds-KKZ54625.1;Parent=gene-AAX15_05580;Dbxref=NCBI_GP:KKZ54625.1;Name=KKZ54625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996014.1;locus_tag=AAX15_05580;product=DNA polymerase III subunit chi;protein_id=KKZ54625.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 20052 21446 . + . ID=gene-AAX15_05585;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AAX15_05585 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 20052 21446 . + 0 ID=cds-KKZ54626.1;Parent=gene-AAX15_05585;Dbxref=NCBI_GP:KKZ54626.1;Name=KKZ54626.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567406.1;locus_tag=AAX15_05585;product=fumarate hydratase;protein_id=KKZ54626.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 21574 22182 . + . ID=gene-AAX15_05590;Name=AAX15_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05590 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 21574 22182 . + 0 ID=cds-KKZ54627.1;Parent=gene-AAX15_05590;Dbxref=NCBI_GP:KKZ54627.1;Name=KKZ54627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642362.1;locus_tag=AAX15_05590;product=hypothetical protein;protein_id=KKZ54627.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 22283 23107 . - . ID=gene-AAX15_05595;Name=AAX15_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05595 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 22283 23107 . - 0 ID=cds-KKZ54628.1;Parent=gene-AAX15_05595;Dbxref=NCBI_GP:KKZ54628.1;Name=KKZ54628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962074.1;locus_tag=AAX15_05595;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=KKZ54628.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 23107 24126 . - . ID=gene-AAX15_05600;Name=AAX15_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05600 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 23107 24126 . - 0 ID=cds-KKZ54629.1;Parent=gene-AAX15_05600;Dbxref=NCBI_GP:KKZ54629.1;Name=KKZ54629.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525814.1;locus_tag=AAX15_05600;product=dihydroorotate dehydrogenase;protein_id=KKZ54629.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 24308 26578 . - . ID=gene-AAX15_05605;Name=AAX15_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05605 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 24308 26578 . - 0 ID=cds-KKZ54630.1;Parent=gene-AAX15_05605;Dbxref=NCBI_GP:KKZ54630.1;Name=KKZ54630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499902.1;locus_tag=AAX15_05605;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=KKZ54630.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 26875 29484 . - . ID=gene-AAX15_05610;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AAX15_05610 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 26875 29484 . - 0 ID=cds-KKZ54631.1;Parent=gene-AAX15_05610;Dbxref=NCBI_GP:KKZ54631.1;Name=KKZ54631.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702431.1;locus_tag=AAX15_05610;product=aminopeptidase N;protein_id=KKZ54631.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 29645 30139 . + . ID=gene-AAX15_05615;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AAX15_05615 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 29645 30139 . + 0 ID=cds-KKZ54632.1;Parent=gene-AAX15_05615;Dbxref=NCBI_GP:KKZ54632.1;Name=KKZ54632.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499897.1;locus_tag=AAX15_05615;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=KKZ54632.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 30209 31297 . + . ID=gene-AAX15_05620;Name=AAX15_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05620 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 30209 31297 . + 0 ID=cds-KKZ54633.1;Parent=gene-AAX15_05620;Dbxref=NCBI_GP:KKZ54633.1;Name=KKZ54633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527770.1;locus_tag=AAX15_05620;product=phosphoribosylaminoimidazole carboxylase;protein_id=KKZ54633.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 31437 32627 . + . ID=gene-AAX15_05625;Name=AAX15_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05625 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 31437 32627 . + 0 ID=cds-KKZ54634.1;Parent=gene-AAX15_05625;Dbxref=NCBI_GP:KKZ54634.1;Name=KKZ54634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499893.1;locus_tag=AAX15_05625;product=aromatic amino acid aminotransferase;protein_id=KKZ54634.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 32673 33125 . - . ID=gene-AAX15_05630;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AAX15_05630 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 32673 33125 . - 0 ID=cds-KKZ54635.1;Parent=gene-AAX15_05630;Dbxref=NCBI_GP:KKZ54635.1;Name=KKZ54635.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065409.1;locus_tag=AAX15_05630;product=molybdopterin guanine dinucleotide biosynthesis protein MoaE;protein_id=KKZ54635.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 33126 33371 . - . ID=gene-AAX15_05635;Name=AAX15_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05635 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 33126 33371 . - 0 ID=cds-KKZ54636.1;Parent=gene-AAX15_05635;Dbxref=NCBI_GP:KKZ54636.1;Name=KKZ54636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631889.1;locus_tag=AAX15_05635;product=molybdopterin synthase;protein_id=KKZ54636.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 33373 33855 . - . ID=gene-AAX15_05640;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AAX15_05640 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 33373 33855 . - 0 ID=cds-KKZ54637.1;Parent=gene-AAX15_05640;Dbxref=NCBI_GP:KKZ54637.1;Name=KKZ54637.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005557065.1;locus_tag=AAX15_05640;product=molybdenum cofactor biosynthesis protein MoaC;protein_id=KKZ54637.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 33944 34957 . - . ID=gene-AAX15_05645;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AAX15_05645 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 33944 34957 . - 0 ID=cds-KKZ54638.1;Parent=gene-AAX15_05645;Dbxref=NCBI_GP:KKZ54638.1;Name=KKZ54638.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525696.1;locus_tag=AAX15_05645;product=molybdenum cofactor biosynthesis protein A;protein_id=KKZ54638.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 35402 36073 . + . ID=gene-AAX15_05650;Name=AAX15_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05650 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 35402 36073 . + 0 ID=cds-KKZ54639.1;Parent=gene-AAX15_05650;Dbxref=NCBI_GP:KKZ54639.1;Name=KKZ54639.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499886.1;locus_tag=AAX15_05650;product=iron-sulfur cluster repair di-iron protein;protein_id=KKZ54639.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 36150 36526 . - . ID=gene-AAX15_05700;Name=AAX15_05700;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=AAX15_05700 GCA_001008275.1|LCTH01000034.1 cmsearch RNase_P_RNA 36150 36526 . - . ID=rna-AAX15_05700;Parent=gene-AAX15_05700;gbkey=ncRNA;locus_tag=AAX15_05700;product=bacterial RNase P GCA_001008275.1|LCTH01000034.1 cmsearch exon 36150 36526 . - . ID=exon-AAX15_05700-1;Parent=rna-AAX15_05700;gbkey=ncRNA;locus_tag=AAX15_05700;product=bacterial RNase P GCA_001008275.1|LCTH01000034.1 Genbank gene 36698 37633 . + . ID=gene-AAX15_05655;Name=AAX15_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05655 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 36698 37633 . + 0 ID=cds-KKZ54640.1;Parent=gene-AAX15_05655;Dbxref=NCBI_GP:KKZ54640.1;Name=KKZ54640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687393.1;locus_tag=AAX15_05655;product=arabinose 5-phosphate isomerase;protein_id=KKZ54640.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 37643 38185 . + . ID=gene-AAX15_05660;Name=AAX15_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05660 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 37643 38185 . + 0 ID=cds-KKZ54641.1;Parent=gene-AAX15_05660;Dbxref=NCBI_GP:KKZ54641.1;Name=KKZ54641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550672.1;locus_tag=AAX15_05660;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=KKZ54641.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 38314 40449 . - . ID=gene-AAX15_05665;Name=AAX15_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05665 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 38314 40449 . - 0 ID=cds-KKZ54642.1;Parent=gene-AAX15_05665;Dbxref=NCBI_GP:KKZ54642.1;Name=KKZ54642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499881.1;locus_tag=AAX15_05665;product=membrane protein;protein_id=KKZ54642.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 40517 41185 . - . ID=gene-AAX15_05670;Name=AAX15_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05670 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 40517 41185 . - 0 ID=cds-KKZ54643.1;Parent=gene-AAX15_05670;Dbxref=NCBI_GP:KKZ54643.1;Name=KKZ54643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499880.1;locus_tag=AAX15_05670;product=hypothetical protein;protein_id=KKZ54643.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 41386 42447 . + . ID=gene-AAX15_05675;Name=AAX15_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05675 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 41386 42447 . + 0 ID=cds-KKZ54644.1;Parent=gene-AAX15_05675;Dbxref=NCBI_GP:KKZ54644.1;Name=KKZ54644.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631898.1;locus_tag=AAX15_05675;product=peptidase;protein_id=KKZ54644.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 42627 43478 . + . ID=gene-AAX15_05680;Name=AAX15_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05680 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 42627 43478 . + 0 ID=cds-KKZ54645.1;Parent=gene-AAX15_05680;Dbxref=NCBI_GP:KKZ54645.1;Name=KKZ54645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642391.1;locus_tag=AAX15_05680;product=plastocyanin;protein_id=KKZ54645.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 43700 44278 . + . ID=gene-AAX15_05685;Name=AAX15_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05685 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 43700 44278 . + 0 ID=cds-KKZ54646.1;Parent=gene-AAX15_05685;Dbxref=NCBI_GP:KKZ54646.1;Name=KKZ54646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696042.1;locus_tag=AAX15_05685;product=electron transporter RsxA;protein_id=KKZ54646.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 44366 44947 . + . ID=gene-AAX15_05690;Name=AAX15_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05690 GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 44366 44947 . + 0 ID=cds-KKZ54647.1;Parent=gene-AAX15_05690;Dbxref=NCBI_GP:KKZ54647.1;Name=KKZ54647.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626168.1;locus_tag=AAX15_05690;product=electron transporter RnfB;protein_id=KKZ54647.1;transl_table=11 GCA_001008275.1|LCTH01000034.1 Genbank gene 44948 46923 . + . ID=gene-AAX15_05695;Name=AAX15_05695;end_range=46923,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05695;partial=true GCA_001008275.1|LCTH01000034.1 Protein Homology CDS 44948 46923 . + 0 ID=cds-KKZ54648.1;Parent=gene-AAX15_05695;Dbxref=NCBI_GP:KKZ54648.1;Name=KKZ54648.1;end_range=46923,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636561.1;locus_tag=AAX15_05695;partial=true;product=electron transporter RnfC;protein_id=KKZ54648.1;transl_table=11 ##sequence-region LCTH01000035.1 1 36785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000035.1 Genbank region 1 36785 . + . ID=LCTH01000035.1:1..36785;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000035.1 Genbank gene 6 82 . - . ID=gene-AAX15_05705;Name=AAX15_05705;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05705 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 6 82 . - . ID=rna-AAX15_05705;Parent=gene-AAX15_05705;anticodon=(pos:complement(46..48));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05705;product=tRNA-Pro GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 6 82 . - . ID=exon-AAX15_05705-1;Parent=rna-AAX15_05705;anticodon=(pos:complement(46..48));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05705;product=tRNA-Pro GCA_001008275.1|LCTH01000035.1 Genbank gene 104 179 . - . ID=gene-AAX15_05710;Name=AAX15_05710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05710 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 104 179 . - . ID=rna-AAX15_05710;Parent=gene-AAX15_05710;anticodon=(pos:complement(144..146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05710;product=tRNA-His GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 104 179 . - . ID=exon-AAX15_05710-1;Parent=rna-AAX15_05710;anticodon=(pos:complement(144..146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05710;product=tRNA-His GCA_001008275.1|LCTH01000035.1 Genbank gene 206 282 . - . ID=gene-AAX15_05715;Name=AAX15_05715;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05715 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 206 282 . - . ID=rna-AAX15_05715;Parent=gene-AAX15_05715;anticodon=(pos:complement(246..248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05715;product=tRNA-Arg GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 206 282 . - . ID=exon-AAX15_05715-1;Parent=rna-AAX15_05715;anticodon=(pos:complement(246..248));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05715;product=tRNA-Arg GCA_001008275.1|LCTH01000035.1 Genbank gene 431 2566 . - . ID=gene-AAX15_05720;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=AAX15_05720 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 431 2566 . - 0 ID=cds-KKZ54484.1;Parent=gene-AAX15_05720;Dbxref=NCBI_GP:KKZ54484.1;Name=KKZ54484.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFS2.1;locus_tag=AAX15_05720;product=23S rRNA methyltransferase;protein_id=KKZ54484.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 2697 2773 . - . ID=gene-AAX15_05725;Name=AAX15_05725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05725 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 2697 2773 . - . ID=rna-AAX15_05725;Parent=gene-AAX15_05725;anticodon=(pos:complement(2737..2739));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05725;product=tRNA-Met GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 2697 2773 . - . ID=exon-AAX15_05725-1;Parent=rna-AAX15_05725;anticodon=(pos:complement(2737..2739));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05725;product=tRNA-Met GCA_001008275.1|LCTH01000035.1 Genbank gene 2959 4071 . + . ID=gene-AAX15_05730;Name=AAX15_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05730 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 2959 4071 . + 0 ID=cds-KKZ54485.1;Parent=gene-AAX15_05730;Dbxref=NCBI_GP:KKZ54485.1;Name=KKZ54485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643843.1;locus_tag=AAX15_05730;product=murein transglycosylase;protein_id=KKZ54485.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 4071 4841 . + . ID=gene-AAX15_05735;Name=AAX15_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05735 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 4071 4841 . + 0 ID=cds-KKZ54486.1;Parent=gene-AAX15_05735;Dbxref=NCBI_GP:KKZ54486.1;Name=KKZ54486.1;Note=accepts sulfur from CsdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649626.1;locus_tag=AAX15_05735;product=sulfur acceptor protein CsdL;protein_id=KKZ54486.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 5019 6035 . + . ID=gene-AAX15_05740;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=AAX15_05740 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 5019 6035 . + 0 ID=cds-KKZ54487.1;Parent=gene-AAX15_05740;Dbxref=NCBI_GP:KKZ54487.1;Name=KKZ54487.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645128.1;locus_tag=AAX15_05740;product=zinc ABC transporter substrate-binding protein;protein_id=KKZ54487.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 6085 6591 . - . ID=gene-AAX15_05745;Name=AAX15_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05745 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 6085 6591 . - 0 ID=cds-KKZ54488.1;Parent=gene-AAX15_05745;Dbxref=NCBI_GP:KKZ54488.1;Name=KKZ54488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645122.1;locus_tag=AAX15_05745;product=membrane protein;protein_id=KKZ54488.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 6699 8060 . - . ID=gene-AAX15_05750;Name=AAX15_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05750 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 6699 8060 . - 0 ID=cds-KKZ54489.1;Parent=gene-AAX15_05750;Dbxref=NCBI_GP:KKZ54489.1;Name=KKZ54489.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649622.1;locus_tag=AAX15_05750;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=KKZ54489.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 8219 8770 . + . ID=gene-AAX15_05755;Name=AAX15_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05755 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 8219 8770 . + 0 ID=cds-KKZ54490.1;Parent=gene-AAX15_05755;Dbxref=NCBI_GP:KKZ54490.1;Name=KKZ54490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645135.1;locus_tag=AAX15_05755;product=hypothetical protein;protein_id=KKZ54490.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 8820 10007 . - . ID=gene-AAX15_05760;Name=AAX15_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05760 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 8820 10007 . - 0 ID=cds-KKZ54491.1;Parent=gene-AAX15_05760;Dbxref=NCBI_GP:KKZ54491.1;Name=KKZ54491.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640784.1;locus_tag=AAX15_05760;product=cystathionine beta-lyase;protein_id=KKZ54491.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 10144 10746 . + . ID=gene-AAX15_05765;Name=AAX15_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05765 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 10144 10746 . + 0 ID=cds-KKZ54492.1;Parent=gene-AAX15_05765;Dbxref=NCBI_GP:KKZ54492.1;Name=KKZ54492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631520.1;locus_tag=AAX15_05765;product=peroxiredoxin;protein_id=KKZ54492.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 10847 11404 . + . ID=gene-AAX15_05770;Name=AAX15_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05770 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 10847 11404 . + 0 ID=cds-KKZ54493.1;Parent=gene-AAX15_05770;Dbxref=NCBI_GP:KKZ54493.1;Name=KKZ54493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625600.1;locus_tag=AAX15_05770;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=KKZ54493.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 11559 11634 . + . ID=gene-AAX15_05775;Name=AAX15_05775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05775 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 11559 11634 . + . ID=rna-AAX15_05775;Parent=gene-AAX15_05775;anticodon=(pos:11592..11594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05775;product=tRNA-Gly GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 11559 11634 . + . ID=exon-AAX15_05775-1;Parent=rna-AAX15_05775;anticodon=(pos:11592..11594);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05775;product=tRNA-Gly GCA_001008275.1|LCTH01000035.1 Genbank gene 11639 11725 . + . ID=gene-AAX15_05780;Name=AAX15_05780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05780 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 11639 11725 . + . ID=rna-AAX15_05780;Parent=gene-AAX15_05780;anticodon=(pos:11673..11675);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05780;product=tRNA-Leu GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 11639 11725 . + . ID=exon-AAX15_05780-1;Parent=rna-AAX15_05780;anticodon=(pos:11673..11675);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05780;product=tRNA-Leu GCA_001008275.1|LCTH01000035.1 Genbank gene 11776 11851 . + . ID=gene-AAX15_05785;Name=AAX15_05785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05785 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 11776 11851 . + . ID=rna-AAX15_05785;Parent=gene-AAX15_05785;anticodon=(pos:11809..11811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05785;product=tRNA-Lys GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 11776 11851 . + . ID=exon-AAX15_05785-1;Parent=rna-AAX15_05785;anticodon=(pos:11809..11811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05785;product=tRNA-Lys GCA_001008275.1|LCTH01000035.1 Genbank gene 11970 12500 . - . ID=gene-AAX15_05790;Name=AAX15_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05790 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 11970 12500 . - 0 ID=cds-KKZ54494.1;Parent=gene-AAX15_05790;Dbxref=NCBI_GP:KKZ54494.1;Name=KKZ54494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640779.1;locus_tag=AAX15_05790;product=inorganic pyrophosphatase;protein_id=KKZ54494.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 12734 14050 . + . ID=gene-AAX15_05795;Name=AAX15_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05795 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 12734 14050 . + 0 ID=cds-KKZ54495.1;Parent=gene-AAX15_05795;Dbxref=NCBI_GP:KKZ54495.1;Name=KKZ54495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637490.1;locus_tag=AAX15_05795;product=permase;protein_id=KKZ54495.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 14140 15189 . - . ID=gene-AAX15_05800;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=AAX15_05800 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 14140 15189 . - 0 ID=cds-KKZ54496.1;Parent=gene-AAX15_05800;Dbxref=NCBI_GP:KKZ54496.1;Name=KKZ54496.1;Note=Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import;gbkey=CDS;gene=fbpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640773.1;locus_tag=AAX15_05800;product=ferric transporter ATP-binding subunit;protein_id=KKZ54496.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 15214 17271 . - . ID=gene-AAX15_05805;Name=AAX15_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05805 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 15214 17271 . - 0 ID=cds-KKZ54497.1;Parent=gene-AAX15_05805;Dbxref=NCBI_GP:KKZ54497.1;Name=KKZ54497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645177.1;locus_tag=AAX15_05805;product=iron ABC transporter permease;protein_id=KKZ54497.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 17335 18369 . - . ID=gene-AAX15_05810;Name=AAX15_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05810 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 17335 18369 . - 0 ID=cds-KKZ54498.1;Parent=gene-AAX15_05810;Dbxref=NCBI_GP:KKZ54498.1;Name=KKZ54498.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766745.1;locus_tag=AAX15_05810;product=hypothetical protein;protein_id=KKZ54498.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 18492 19532 . - . ID=gene-AAX15_05815;Name=AAX15_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05815 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 18492 19532 . - 0 ID=cds-KKZ54499.1;Parent=gene-AAX15_05815;Dbxref=NCBI_GP:KKZ54499.1;Name=KKZ54499.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43951.1;locus_tag=AAX15_05815;product=hypothetical protein;protein_id=KKZ54499.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 19699 20337 . + . ID=gene-AAX15_05820;Name=AAX15_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05820 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 19699 20337 . + 0 ID=cds-KKZ54500.1;Parent=gene-AAX15_05820;Dbxref=NCBI_GP:KKZ54500.1;Name=KKZ54500.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627960.1;locus_tag=AAX15_05820;product=uridine kinase;protein_id=KKZ54500.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 20346 20933 . + . ID=gene-AAX15_05825;Name=AAX15_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05825 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 20346 20933 . + 0 ID=cds-KKZ54501.1;Parent=gene-AAX15_05825;Dbxref=NCBI_GP:KKZ54501.1;Name=KKZ54501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630145.1;locus_tag=AAX15_05825;product=deoxycytidine triphosphate deaminase;protein_id=KKZ54501.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 20937 22121 . + . ID=gene-AAX15_05830;Name=AAX15_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05830 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 20937 22121 . + 0 ID=cds-KKZ54502.1;Parent=gene-AAX15_05830;Dbxref=NCBI_GP:KKZ54502.1;Name=KKZ54502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634067.1;locus_tag=AAX15_05830;product=hypothetical protein;protein_id=KKZ54502.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 22121 23311 . + . ID=gene-AAX15_05835;Name=AAX15_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05835 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 22121 23311 . + 0 ID=cds-KKZ54503.1;Parent=gene-AAX15_05835;Dbxref=NCBI_GP:KKZ54503.1;Name=KKZ54503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44535.1;locus_tag=AAX15_05835;product=sugar transporter;protein_id=KKZ54503.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 23391 24902 . - . ID=gene-AAX15_05840;Name=AAX15_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05840 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 23391 24902 . - 0 ID=cds-KKZ54504.1;Parent=gene-AAX15_05840;Dbxref=NCBI_GP:KKZ54504.1;Name=KKZ54504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701409.1;locus_tag=AAX15_05840;product=GTP-binding protein Der;protein_id=KKZ54504.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 25323 25399 . - . ID=gene-AAX15_05845;Name=AAX15_05845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05845 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 25323 25399 . - . ID=rna-AAX15_05845;Parent=gene-AAX15_05845;anticodon=(pos:complement(25363..25365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05845;product=tRNA-Asp GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 25323 25399 . - . ID=exon-AAX15_05845-1;Parent=rna-AAX15_05845;anticodon=(pos:complement(25363..25365));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05845;product=tRNA-Asp GCA_001008275.1|LCTH01000035.1 Genbank gene 25423 25499 . - . ID=gene-AAX15_05850;Name=AAX15_05850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_05850 GCA_001008275.1|LCTH01000035.1 tRNAscan-SE tRNA 25423 25499 . - . ID=rna-AAX15_05850;Parent=gene-AAX15_05850;anticodon=(pos:complement(25463..25465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05850;product=tRNA-Asp GCA_001008275.1|LCTH01000035.1 tRNAscan-SE exon 25423 25499 . - . ID=exon-AAX15_05850-1;Parent=rna-AAX15_05850;anticodon=(pos:complement(25463..25465));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_05850;product=tRNA-Asp GCA_001008275.1|LCTH01000035.1 Genbank gene 25587 26357 . - . ID=gene-AAX15_05855;Name=AAX15_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05855 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 25587 26357 . - 0 ID=cds-KKZ54505.1;Parent=gene-AAX15_05855;Dbxref=NCBI_GP:KKZ54505.1;Name=KKZ54505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766740.1;locus_tag=AAX15_05855;product=DNA polymerase III subunit epsilon;protein_id=KKZ54505.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 26418 26882 . + . ID=gene-AAX15_05860;Name=AAX15_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05860 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 26418 26882 . + 0 ID=cds-KKZ54506.1;Parent=gene-AAX15_05860;Dbxref=NCBI_GP:KKZ54506.1;Name=KKZ54506.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634076.1;locus_tag=AAX15_05860;product=ribonuclease H;protein_id=KKZ54506.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 27145 28281 . + . ID=gene-AAX15_05865;Name=AAX15_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05865 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 27145 28281 . + 0 ID=cds-KKZ54507.1;Parent=gene-AAX15_05865;Dbxref=NCBI_GP:KKZ54507.1;Name=KKZ54507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630129.1;locus_tag=AAX15_05865;product=membrane protein;protein_id=KKZ54507.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 28634 29449 . - . ID=gene-AAX15_05870;Name=AAX15_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05870 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 28634 29449 . - 0 ID=cds-KKZ54508.1;Parent=gene-AAX15_05870;Dbxref=NCBI_GP:KKZ54508.1;Name=KKZ54508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766733.1;locus_tag=AAX15_05870;product=iron ABC transporter permease;protein_id=KKZ54508.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 29442 30290 . - . ID=gene-AAX15_05875;Name=AAX15_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05875 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 29442 30290 . - 0 ID=cds-KKZ54509.1;Parent=gene-AAX15_05875;Dbxref=NCBI_GP:KKZ54509.1;Name=KKZ54509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996136.1;locus_tag=AAX15_05875;product=membrane protein;protein_id=KKZ54509.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 30294 31214 . - . ID=gene-AAX15_05880;Name=AAX15_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05880 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 30294 31214 . - 0 ID=cds-KKZ54510.1;Parent=gene-AAX15_05880;Dbxref=NCBI_GP:KKZ54510.1;Name=KKZ54510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634082.1;locus_tag=AAX15_05880;product=iron ABC transporter permease;protein_id=KKZ54510.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 31214 32095 . - . ID=gene-AAX15_05885;Name=AAX15_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05885 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 31214 32095 . - 0 ID=cds-KKZ54511.1;Parent=gene-AAX15_05885;Dbxref=NCBI_GP:KKZ54511.1;Name=KKZ54511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701596.1;locus_tag=AAX15_05885;product=iron-binding protein;protein_id=KKZ54511.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 32454 32882 . + . ID=gene-AAX15_05890;Name=AAX15_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05890 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 32454 32882 . + 0 ID=cds-KKZ54512.1;Parent=gene-AAX15_05890;Dbxref=NCBI_GP:KKZ54512.1;Name=KKZ54512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640743.1;locus_tag=AAX15_05890;product=hypothetical protein;protein_id=KKZ54512.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 32994 33872 . - . ID=gene-AAX15_05895;Name=AAX15_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05895 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 32994 33872 . - 0 ID=cds-KKZ54513.1;Parent=gene-AAX15_05895;Dbxref=NCBI_GP:KKZ54513.1;Name=KKZ54513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766729.1;locus_tag=AAX15_05895;product=D-alanyl-D-alanine endopeptidase;protein_id=KKZ54513.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 34120 35271 . + . ID=gene-AAX15_05900;Name=AAX15_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05900 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 34120 35271 . + 0 ID=cds-KKZ54514.1;Parent=gene-AAX15_05900;Dbxref=NCBI_GP:KKZ54514.1;Name=KKZ54514.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637452.1;locus_tag=AAX15_05900;product=ribosomal RNA large subunit methyltransferase N;protein_id=KKZ54514.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 35372 35914 . + . ID=gene-AAX15_05905;Name=AAX15_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05905 GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 35372 35914 . + 0 ID=cds-KKZ54515.1;Parent=gene-AAX15_05905;Dbxref=NCBI_GP:KKZ54515.1;Name=KKZ54515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637448.1;locus_tag=AAX15_05905;product=hypothetical protein;protein_id=KKZ54515.1;transl_table=11 GCA_001008275.1|LCTH01000035.1 Genbank gene 35985 36785 . + . ID=gene-AAX15_05910;Name=AAX15_05910;end_range=36785,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05910;partial=true GCA_001008275.1|LCTH01000035.1 Protein Homology CDS 35985 36785 . + 0 ID=cds-KKZ54516.1;Parent=gene-AAX15_05910;Dbxref=NCBI_GP:KKZ54516.1;Name=KKZ54516.1;end_range=36785,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640734.1;locus_tag=AAX15_05910;partial=true;product=hypothetical protein;protein_id=KKZ54516.1;transl_table=11 ##sequence-region LCTH01000036.1 1 14991 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000036.1 Genbank region 1 14991 . + . ID=LCTH01000036.1:1..14991;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000036.1 Genbank gene 1 353 . + . ID=gene-AAX15_05915;Name=AAX15_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05915;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000036.1 GeneMarkS+ CDS 1 353 . + 2 ID=cds-KKZ54431.1;Parent=gene-AAX15_05915;Dbxref=NCBI_GP:KKZ54431.1;Name=KKZ54431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_05915;partial=true;product=hypothetical protein;protein_id=KKZ54431.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 358 1434 . + . ID=gene-AAX15_05920;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=AAX15_05920 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 358 1434 . + 0 ID=cds-KKZ54432.1;Parent=gene-AAX15_05920;Dbxref=NCBI_GP:KKZ54432.1;Name=KKZ54432.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645341.1;locus_tag=AAX15_05920;product=electron transporter RnfD;protein_id=KKZ54432.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 1434 2057 . + . ID=gene-AAX15_05925;Name=AAX15_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05925 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 1434 2057 . + 0 ID=cds-KKZ54433.1;Parent=gene-AAX15_05925;Dbxref=NCBI_GP:KKZ54433.1;Name=KKZ54433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642401.1;locus_tag=AAX15_05925;product=electron transporter RnfG;protein_id=KKZ54433.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 2059 2757 . + . ID=gene-AAX15_05930;Name=AAX15_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05930 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 2059 2757 . + 0 ID=cds-KKZ54434.1;Parent=gene-AAX15_05930;Dbxref=NCBI_GP:KKZ54434.1;Name=KKZ54434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626176.1;locus_tag=AAX15_05930;product=elongation factor G;protein_id=KKZ54434.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 2759 3394 . + . ID=gene-AAX15_05935;Name=AAX15_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05935 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 2759 3394 . + 0 ID=cds-KKZ54435.1;Parent=gene-AAX15_05935;Dbxref=NCBI_GP:KKZ54435.1;Name=KKZ54435.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636557.1;locus_tag=AAX15_05935;product=endonuclease III;protein_id=KKZ54435.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 3454 4827 . + . ID=gene-AAX15_05940;Name=AAX15_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05940 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 3454 4827 . + 0 ID=cds-KKZ54436.1;Parent=gene-AAX15_05940;Dbxref=NCBI_GP:KKZ54436.1;Name=KKZ54436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702479.1;locus_tag=AAX15_05940;product=transporter;protein_id=KKZ54436.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 4875 6230 . - . ID=gene-AAX15_05945;Name=AAX15_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05945 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 4875 6230 . - 0 ID=cds-KKZ54437.1;Parent=gene-AAX15_05945;Dbxref=NCBI_GP:KKZ54437.1;Name=KKZ54437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499919.1;locus_tag=AAX15_05945;product=sensor protein QseC;protein_id=KKZ54437.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 6231 6893 . - . ID=gene-AAX15_05950;Name=AAX15_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05950 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 6231 6893 . - 0 ID=cds-KKZ54438.1;Parent=gene-AAX15_05950;Dbxref=NCBI_GP:KKZ54438.1;Name=KKZ54438.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645425.1;locus_tag=AAX15_05950;product=transcriptional regulator;protein_id=KKZ54438.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 6958 7323 . - . ID=gene-AAX15_05955;Name=AAX15_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05955 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 6958 7323 . - 0 ID=cds-KKZ54439.1;Parent=gene-AAX15_05955;Dbxref=NCBI_GP:KKZ54439.1;Name=KKZ54439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636761.1;locus_tag=AAX15_05955;product=hypothetical protein;protein_id=KKZ54439.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 7456 8343 . - . ID=gene-AAX15_05960;Name=AAX15_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05960 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 7456 8343 . - 0 ID=cds-KKZ54440.1;Parent=gene-AAX15_05960;Dbxref=NCBI_GP:KKZ54440.1;Name=KKZ54440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635969.1;locus_tag=AAX15_05960;product=peroxidase;protein_id=KKZ54440.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 8527 10434 . + . ID=gene-AAX15_05965;Name=AAX15_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05965 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 8527 10434 . + 0 ID=cds-KKZ54441.1;Parent=gene-AAX15_05965;Dbxref=NCBI_GP:KKZ54441.1;Name=KKZ54441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645427.1;locus_tag=AAX15_05965;product=iron permease;protein_id=KKZ54441.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 10461 10982 . + . ID=gene-AAX15_05970;Name=AAX15_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05970 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 10461 10982 . + 0 ID=cds-KKZ54442.1;Parent=gene-AAX15_05970;Dbxref=NCBI_GP:KKZ54442.1;Name=KKZ54442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499926.1;locus_tag=AAX15_05970;product=iron transporter;protein_id=KKZ54442.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 11079 12494 . + . ID=gene-AAX15_05975;Name=AAX15_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05975 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 11079 12494 . + 0 ID=cds-KKZ54443.1;Parent=gene-AAX15_05975;Dbxref=NCBI_GP:KKZ54443.1;Name=KKZ54443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642419.1;locus_tag=AAX15_05975;product=membrane protein;protein_id=KKZ54443.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 12497 13837 . + . ID=gene-AAX15_05980;Name=AAX15_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05980 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 12497 13837 . + 0 ID=cds-KKZ54444.1;Parent=gene-AAX15_05980;Dbxref=NCBI_GP:KKZ54444.1;Name=KKZ54444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642421.1;locus_tag=AAX15_05980;product=ABC transporter permease;protein_id=KKZ54444.1;transl_table=11 GCA_001008275.1|LCTH01000036.1 Genbank gene 13824 14978 . + . ID=gene-AAX15_05985;Name=AAX15_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05985 GCA_001008275.1|LCTH01000036.1 Protein Homology CDS 13824 14978 . + 0 ID=cds-KKZ54445.1;Parent=gene-AAX15_05985;Dbxref=NCBI_GP:KKZ54445.1;Name=KKZ54445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626207.1;locus_tag=AAX15_05985;product=membrane protein;protein_id=KKZ54445.1;transl_table=11 ##sequence-region LCTH01000037.1 1 34934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000037.1 Genbank region 1 34934 . + . ID=LCTH01000037.1:1..34934;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000037.1 Genbank gene 1 407 . - . ID=gene-AAX15_05990;Name=AAX15_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05990;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 1 407 . - 0 ID=cds-KKZ54363.1;Parent=gene-AAX15_05990;Dbxref=NCBI_GP:KKZ54363.1;Name=KKZ54363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662441.1;locus_tag=AAX15_05990;partial=true;product=symporter;protein_id=KKZ54363.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 613 2664 . - . ID=gene-AAX15_05995;Name=AAX15_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_05995 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 613 2664 . - 0 ID=cds-KKZ54364.1;Parent=gene-AAX15_05995;Dbxref=NCBI_GP:KKZ54364.1;Name=KKZ54364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637827.1;locus_tag=AAX15_05995;product=serine/threonine protein phosphatase;protein_id=KKZ54364.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 2743 4746 . - . ID=gene-AAX15_06000;Name=AAX15_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06000 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 2743 4746 . - 0 ID=cds-KKZ54365.1;Parent=gene-AAX15_06000;Dbxref=NCBI_GP:KKZ54365.1;Name=KKZ54365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644660.1;locus_tag=AAX15_06000;product=hypothetical protein;protein_id=KKZ54365.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 4733 6049 . - . ID=gene-AAX15_06005;Name=AAX15_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06005 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 4733 6049 . - 0 ID=cds-KKZ54366.1;Parent=gene-AAX15_06005;Dbxref=NCBI_GP:KKZ54366.1;Name=KKZ54366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650372.1;locus_tag=AAX15_06005;product=hypothetical protein;protein_id=KKZ54366.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 6088 6840 . - . ID=gene-AAX15_06010;Name=AAX15_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06010 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 6088 6840 . - 0 ID=cds-KKZ54367.1;Parent=gene-AAX15_06010;Dbxref=NCBI_GP:KKZ54367.1;Name=KKZ54367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526300.1;locus_tag=AAX15_06010;product=protein phosphatase;protein_id=KKZ54367.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 6840 7685 . - . ID=gene-AAX15_06015;Name=AAX15_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06015 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 6840 7685 . - 0 ID=cds-KKZ54368.1;Parent=gene-AAX15_06015;Dbxref=NCBI_GP:KKZ54368.1;Name=KKZ54368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637830.1;locus_tag=AAX15_06015;product=NAD-dependent deacetylase;protein_id=KKZ54368.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 7682 7882 . - . ID=gene-AAX15_06020;Name=AAX15_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06020 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 7682 7882 . - 0 ID=cds-KKZ54369.1;Parent=gene-AAX15_06020;Dbxref=NCBI_GP:KKZ54369.1;Name=KKZ54369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634667.1;locus_tag=AAX15_06020;product=cell division protein FtsK;protein_id=KKZ54369.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 8100 9098 . + . ID=gene-AAX15_06025;Name=AAX15_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06025 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 8100 9098 . + 0 ID=cds-KKZ54370.1;Parent=gene-AAX15_06025;Dbxref=NCBI_GP:KKZ54370.1;Name=KKZ54370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065017.1;locus_tag=AAX15_06025;product=cytochrome C;protein_id=KKZ54370.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 9126 9845 . - . ID=gene-AAX15_06030;Name=AAX15_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06030 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 9126 9845 . - 0 ID=cds-KKZ54371.1;Parent=gene-AAX15_06030;Dbxref=NCBI_GP:KKZ54371.1;Name=KKZ54371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628684.1;locus_tag=AAX15_06030;product=NAD-dependent deacetylase;protein_id=KKZ54371.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 9842 10738 . - . ID=gene-AAX15_06035;Name=AAX15_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06035 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 9842 10738 . - 0 ID=cds-KKZ54372.1;Parent=gene-AAX15_06035;Dbxref=NCBI_GP:KKZ54372.1;Name=KKZ54372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628682.1;locus_tag=AAX15_06035;product=5'-3'-deoxyribonucleotidase;protein_id=KKZ54372.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 10797 11750 . - . ID=gene-AAX15_06040;Name=AAX15_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06040 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 10797 11750 . - 0 ID=cds-KKZ54373.1;Parent=gene-AAX15_06040;Dbxref=NCBI_GP:KKZ54373.1;Name=KKZ54373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662473.1;locus_tag=AAX15_06040;product=transcriptional regulator;protein_id=KKZ54373.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 11815 12300 . - . ID=gene-AAX15_06045;Name=AAX15_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06045 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 11815 12300 . - 0 ID=cds-KKZ54374.1;Parent=gene-AAX15_06045;Dbxref=NCBI_GP:KKZ54374.1;Name=KKZ54374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637838.1;locus_tag=AAX15_06045;product=endopeptidase;protein_id=KKZ54374.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 12353 12643 . - . ID=gene-AAX15_06050;Name=AAX15_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06050 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 12353 12643 . - 0 ID=cds-KKZ54375.1;Parent=gene-AAX15_06050;Dbxref=NCBI_GP:KKZ54375.1;Name=KKZ54375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43723.1;locus_tag=AAX15_06050;product=integration host factor subunit alpha;protein_id=KKZ54375.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 12645 15032 . - . ID=gene-AAX15_06055;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AAX15_06055 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 12645 15032 . - 0 ID=cds-KKZ54376.1;Parent=gene-AAX15_06055;Dbxref=NCBI_GP:KKZ54376.1;Name=KKZ54376.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995958.1;locus_tag=AAX15_06055;product=phenylalanine--tRNA ligase;protein_id=KKZ54376.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 15066 16055 . - . ID=gene-AAX15_06060;Name=AAX15_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06060 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 15066 16055 . - 0 ID=cds-KKZ54377.1;Parent=gene-AAX15_06060;Dbxref=NCBI_GP:KKZ54377.1;Name=KKZ54377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650357.1;locus_tag=AAX15_06060;product=phenylalanyl-tRNA synthetase;protein_id=KKZ54377.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 16204 16941 . - . ID=gene-AAX15_06065;Name=AAX15_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06065 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 16204 16941 . - 0 ID=cds-KKZ54378.1;Parent=gene-AAX15_06065;Dbxref=NCBI_GP:KKZ54378.1;Name=KKZ54378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995956.1;locus_tag=AAX15_06065;product=hypothetical protein;protein_id=KKZ54378.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 16930 17178 . + . ID=gene-AAX15_06070;Name=AAX15_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06070 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 16930 17178 . + 0 ID=cds-KKZ54379.1;Parent=gene-AAX15_06070;Dbxref=NCBI_GP:KKZ54379.1;Name=KKZ54379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45154.1;locus_tag=AAX15_06070;product=(2Fe-2S)-binding protein;protein_id=KKZ54379.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 17173 17985 . - . ID=gene-AAX15_06075;Name=AAX15_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06075 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 17173 17985 . - 0 ID=cds-KKZ54380.1;Parent=gene-AAX15_06075;Dbxref=NCBI_GP:KKZ54380.1;Name=KKZ54380.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696006.1;locus_tag=AAX15_06075;product=dihydrodipicolinate reductase;protein_id=KKZ54380.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 18002 18631 . - . ID=gene-AAX15_06080;Name=AAX15_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06080 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 18002 18631 . - 0 ID=cds-KKZ54381.1;Parent=gene-AAX15_06080;Dbxref=NCBI_GP:KKZ54381.1;Name=KKZ54381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631753.1;locus_tag=AAX15_06080;product=membrane protein;protein_id=KKZ54381.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 18631 19122 . - . ID=gene-AAX15_06085;Name=AAX15_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06085 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 18631 19122 . - 0 ID=cds-KKZ54382.1;Parent=gene-AAX15_06085;Dbxref=NCBI_GP:KKZ54382.1;Name=KKZ54382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44157.1;locus_tag=AAX15_06085;product=phosphatidylglycerophosphatase;protein_id=KKZ54382.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 19119 20105 . - . ID=gene-AAX15_06090;Name=AAX15_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06090 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 19119 20105 . - 0 ID=cds-KKZ54383.1;Parent=gene-AAX15_06090;Dbxref=NCBI_GP:KKZ54383.1;Name=KKZ54383.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500527.1;locus_tag=AAX15_06090;product=thiamine monophosphate kinase;protein_id=KKZ54383.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 20172 20606 . - . ID=gene-AAX15_06095;Name=AAX15_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06095 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 20172 20606 . - 0 ID=cds-KKZ54384.1;Parent=gene-AAX15_06095;Dbxref=NCBI_GP:KKZ54384.1;Name=KKZ54384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702186.1;locus_tag=AAX15_06095;product=antitermination protein NusB;protein_id=KKZ54384.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 20610 21083 . - . ID=gene-AAX15_06100;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AAX15_06100 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 20610 21083 . - 0 ID=cds-KKZ54385.1;Parent=gene-AAX15_06100;Dbxref=NCBI_GP:KKZ54385.1;Name=KKZ54385.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKN2.1;locus_tag=AAX15_06100;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=KKZ54385.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 21310 22713 . + . ID=gene-AAX15_06105;Name=AAX15_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06105 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 21310 22713 . + 0 ID=cds-KKZ54386.1;Parent=gene-AAX15_06105;Dbxref=NCBI_GP:KKZ54386.1;Name=KKZ54386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995950.1;locus_tag=AAX15_06105;product=asparaginyl-tRNA synthetase;protein_id=KKZ54386.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 22789 23478 . + . ID=gene-AAX15_06110;Name=AAX15_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06110 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 22789 23478 . + 0 ID=cds-KKZ54387.1;Parent=gene-AAX15_06110;Dbxref=NCBI_GP:KKZ54387.1;Name=KKZ54387.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645039.1;locus_tag=AAX15_06110;product=carbonic anhydrase;protein_id=KKZ54387.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 23505 25448 . - . ID=gene-AAX15_06115;Name=AAX15_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06115 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 23505 25448 . - 0 ID=cds-KKZ54388.1;Parent=gene-AAX15_06115;Dbxref=NCBI_GP:KKZ54388.1;Name=KKZ54388.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631772.1;locus_tag=AAX15_06115;product=ABC transporter ATPase;protein_id=KKZ54388.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 25542 26927 . - . ID=gene-AAX15_06120;Name=AAX15_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06120 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 25542 26927 . - 0 ID=cds-KKZ54389.1;Parent=gene-AAX15_06120;Dbxref=NCBI_GP:KKZ54389.1;Name=KKZ54389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644684.1;locus_tag=AAX15_06120;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=KKZ54389.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 27020 27715 . - . ID=gene-AAX15_06125;Name=AAX15_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06125 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 27020 27715 . - 0 ID=cds-KKZ54390.1;Parent=gene-AAX15_06125;Dbxref=NCBI_GP:KKZ54390.1;Name=KKZ54390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652869.1;locus_tag=AAX15_06125;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=KKZ54390.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 27736 28167 . - . ID=gene-AAX15_06130;Name=AAX15_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06130 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 27736 28167 . - 0 ID=cds-KKZ54391.1;Parent=gene-AAX15_06130;Dbxref=NCBI_GP:KKZ54391.1;Name=KKZ54391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628643.1;locus_tag=AAX15_06130;product=membrane protein;protein_id=KKZ54391.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 28482 28973 . + . ID=gene-AAX15_06135;Name=AAX15_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06135 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 28482 28973 . + 0 ID=cds-KKZ54392.1;Parent=gene-AAX15_06135;Dbxref=NCBI_GP:KKZ54392.1;Name=KKZ54392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702181.1;locus_tag=AAX15_06135;product=nuclease;protein_id=KKZ54392.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 28963 30162 . + . ID=gene-AAX15_06140;Name=AAX15_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06140 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 28963 30162 . + 0 ID=cds-KKZ54393.1;Parent=gene-AAX15_06140;Dbxref=NCBI_GP:KKZ54393.1;Name=KKZ54393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637854.1;locus_tag=AAX15_06140;product=cysteine desulfurase;protein_id=KKZ54393.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 30159 30536 . + . ID=gene-AAX15_06145;Name=AAX15_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06145 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 30159 30536 . + 0 ID=cds-KKZ54394.1;Parent=gene-AAX15_06145;Dbxref=NCBI_GP:KKZ54394.1;Name=KKZ54394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44156.3;locus_tag=AAX15_06145;product=hypothetical protein;protein_id=KKZ54394.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 30527 31312 . + . ID=gene-AAX15_06150;Name=AAX15_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06150 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 30527 31312 . + 0 ID=cds-KKZ54395.1;Parent=gene-AAX15_06150;Dbxref=NCBI_GP:KKZ54395.1;Name=KKZ54395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665226.1;locus_tag=AAX15_06150;product=hypothetical protein;protein_id=KKZ54395.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 31367 32206 . + . ID=gene-AAX15_06155;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AAX15_06155 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 31367 32206 . + 0 ID=cds-KKZ54396.1;Parent=gene-AAX15_06155;Dbxref=NCBI_GP:KKZ54396.1;Name=KKZ54396.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665224.1;locus_tag=AAX15_06155;product=7-cyano-7-deazaguanine reductase;protein_id=KKZ54396.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 32242 33366 . - . ID=gene-AAX15_06160;Name=AAX15_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06160 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 32242 33366 . - 0 ID=cds-KKZ54397.1;Parent=gene-AAX15_06160;Dbxref=NCBI_GP:KKZ54397.1;Name=KKZ54397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645059.1;locus_tag=AAX15_06160;product=prephenate dehydrogenase;protein_id=KKZ54397.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 33456 34376 . - . ID=gene-AAX15_06165;Name=AAX15_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06165 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 33456 34376 . - 0 ID=cds-KKZ54398.1;Parent=gene-AAX15_06165;Dbxref=NCBI_GP:KKZ54398.1;Name=KKZ54398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK43.1;locus_tag=AAX15_06165;product=pseudouridine synthase;protein_id=KKZ54398.1;transl_table=11 GCA_001008275.1|LCTH01000037.1 Genbank gene 34376 34762 . - . ID=gene-AAX15_06170;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AAX15_06170 GCA_001008275.1|LCTH01000037.1 Protein Homology CDS 34376 34762 . - 0 ID=cds-KKZ54399.1;Parent=gene-AAX15_06170;Dbxref=NCBI_GP:KKZ54399.1;Name=KKZ54399.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK42.1;locus_tag=AAX15_06170;product=ribosome-binding factor A;protein_id=KKZ54399.1;transl_table=11 ##sequence-region LCTH01000038.1 1 62530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000038.1 Genbank region 1 62530 . + . ID=LCTH01000038.1:1..62530;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000038.1 Genbank gene 1 308 . - . ID=gene-AAX15_06175;Name=AAX15_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06175;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 1 308 . - 0 ID=cds-KKZ54297.1;Parent=gene-AAX15_06175;Dbxref=NCBI_GP:KKZ54297.1;Name=KKZ54297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501109.1;locus_tag=AAX15_06175;partial=true;product=membrane protein;protein_id=KKZ54297.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 405 481 . - . ID=gene-AAX15_06180;Name=AAX15_06180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06180 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 405 481 . - . ID=rna-AAX15_06180;Parent=gene-AAX15_06180;anticodon=(pos:complement(445..447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06180;product=tRNA-Arg GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 405 481 . - . ID=exon-AAX15_06180-1;Parent=rna-AAX15_06180;anticodon=(pos:complement(445..447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06180;product=tRNA-Arg GCA_001008275.1|LCTH01000038.1 Genbank gene 538 614 . - . ID=gene-AAX15_06185;Name=AAX15_06185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06185 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 538 614 . - . ID=rna-AAX15_06185;Parent=gene-AAX15_06185;anticodon=(pos:complement(578..580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06185;product=tRNA-Arg GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 538 614 . - . ID=exon-AAX15_06185-1;Parent=rna-AAX15_06185;anticodon=(pos:complement(578..580));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06185;product=tRNA-Arg GCA_001008275.1|LCTH01000038.1 Genbank gene 635 729 . - . ID=gene-AAX15_06190;Name=AAX15_06190;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06190 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 635 729 . - . ID=rna-AAX15_06190;Parent=gene-AAX15_06190;anticodon=(pos:complement(692..694));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06190;product=tRNA-Ser GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 635 729 . - . ID=exon-AAX15_06190-1;Parent=rna-AAX15_06190;anticodon=(pos:complement(692..694));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06190;product=tRNA-Ser GCA_001008275.1|LCTH01000038.1 Genbank gene 845 1789 . - . ID=gene-AAX15_06195;Name=AAX15_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06195 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 845 1789 . - 0 ID=cds-KKZ54298.1;Parent=gene-AAX15_06195;Dbxref=NCBI_GP:KKZ54298.1;Name=KKZ54298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636080.1;locus_tag=AAX15_06195;product=hydrolase;protein_id=KKZ54298.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 1868 2983 . - . ID=gene-AAX15_06200;Name=AAX15_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06200 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 1868 2983 . - 0 ID=cds-KKZ54299.1;Parent=gene-AAX15_06200;Dbxref=NCBI_GP:KKZ54299.1;Name=KKZ54299.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44801.1;locus_tag=AAX15_06200;product=aspartate-semialdehyde dehydrogenase;protein_id=KKZ54299.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 3149 3865 . - . ID=gene-AAX15_06205;Name=AAX15_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06205 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 3149 3865 . - 0 ID=cds-KKZ54300.1;Parent=gene-AAX15_06205;Dbxref=NCBI_GP:KKZ54300.1;Name=KKZ54300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501104.1;locus_tag=AAX15_06205;product=membrane protein;protein_id=KKZ54300.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 4018 5355 . + . ID=gene-AAX15_06210;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=AAX15_06210 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 4018 5355 . + 0 ID=cds-KKZ54301.1;Parent=gene-AAX15_06210;Dbxref=NCBI_GP:KKZ54301.1;Name=KKZ54301.1;Note=catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit;gbkey=CDS;gene=rimO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626621.1;locus_tag=AAX15_06210;product=ribosomal protein S12 methylthiotransferase;protein_id=KKZ54301.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 5545 6933 . - . ID=gene-AAX15_06215;Name=AAX15_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06215 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 5545 6933 . - 0 ID=cds-KKZ54302.1;Parent=gene-AAX15_06215;Dbxref=NCBI_GP:KKZ54302.1;Name=KKZ54302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521021.1;locus_tag=AAX15_06215;product=hypothetical protein;protein_id=KKZ54302.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 6930 11897 . - . ID=gene-AAX15_06220;Name=AAX15_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06220 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 6930 11897 . - 0 ID=cds-KKZ54339.1;Parent=gene-AAX15_06220;Dbxref=NCBI_GP:KKZ54339.1;Name=KKZ54339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173165.1;locus_tag=AAX15_06220;product=helicase;protein_id=KKZ54339.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 12215 14227 . - . ID=gene-AAX15_06225;Name=AAX15_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06225 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 12215 14227 . - 0 ID=cds-KKZ54303.1;Parent=gene-AAX15_06225;Dbxref=NCBI_GP:KKZ54303.1;Name=KKZ54303.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500722.1;locus_tag=AAX15_06225;product=ATP-dependent DNA helicase Rep;protein_id=KKZ54303.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 14233 14445 . - . ID=gene-AAX15_06230;Name=AAX15_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06230 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 14233 14445 . - 0 ID=cds-KKZ54304.1;Parent=gene-AAX15_06230;Dbxref=NCBI_GP:KKZ54304.1;Name=KKZ54304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667603.1;locus_tag=AAX15_06230;product=hypothetical protein;protein_id=KKZ54304.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 14442 14912 . - . ID=gene-AAX15_06235;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AAX15_06235 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 14442 14912 . - 0 ID=cds-KKZ54305.1;Parent=gene-AAX15_06235;Dbxref=NCBI_GP:KKZ54305.1;Name=KKZ54305.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638492.1;locus_tag=AAX15_06235;product=phosphopantetheine adenylyltransferase;protein_id=KKZ54305.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 14909 16192 . - . ID=gene-AAX15_06240;Name=AAX15_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06240 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 14909 16192 . - 0 ID=cds-KKZ54306.1;Parent=gene-AAX15_06240;Dbxref=NCBI_GP:KKZ54306.1;Name=KKZ54306.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626632.1;locus_tag=AAX15_06240;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=KKZ54306.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 16255 17019 . + . ID=gene-AAX15_06245;Name=AAX15_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06245 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 16255 17019 . + 0 ID=cds-KKZ54307.1;Parent=gene-AAX15_06245;Dbxref=NCBI_GP:KKZ54307.1;Name=KKZ54307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701787.1;locus_tag=AAX15_06245;product=glycosyltransferase;protein_id=KKZ54307.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 17016 17573 . - . ID=gene-AAX15_06250;Name=AAX15_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06250 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 17016 17573 . - 0 ID=cds-KKZ54308.1;Parent=gene-AAX15_06250;Dbxref=NCBI_GP:KKZ54308.1;Name=KKZ54308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633174.1;locus_tag=AAX15_06250;product=DNA-3-methyladenine glycosidase;protein_id=KKZ54308.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 17570 18388 . - . ID=gene-AAX15_06255;Name=AAX15_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06255 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 17570 18388 . - 0 ID=cds-KKZ54309.1;Parent=gene-AAX15_06255;Dbxref=NCBI_GP:KKZ54309.1;Name=KKZ54309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629964.1;locus_tag=AAX15_06255;product=shikimate dehydrogenase;protein_id=KKZ54309.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 18392 18943 . - . ID=gene-AAX15_06260;Name=AAX15_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06260 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 18392 18943 . - 0 ID=cds-KKZ54310.1;Parent=gene-AAX15_06260;Dbxref=NCBI_GP:KKZ54310.1;Name=KKZ54310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688145.1;locus_tag=AAX15_06260;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=KKZ54310.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 18959 19495 . - . ID=gene-AAX15_06265;Name=AAX15_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06265 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 18959 19495 . - 0 ID=cds-KKZ54311.1;Parent=gene-AAX15_06265;Dbxref=NCBI_GP:KKZ54311.1;Name=KKZ54311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054643.1;locus_tag=AAX15_06265;product=hypothetical protein;protein_id=KKZ54311.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 19505 21421 . - . ID=gene-AAX15_06270;Name=AAX15_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06270 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 19505 21421 . - 0 ID=cds-KKZ54312.1;Parent=gene-AAX15_06270;Dbxref=NCBI_GP:KKZ54312.1;Name=KKZ54312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638479.1;locus_tag=AAX15_06270;product=ABC transporter ATP-binding protein;protein_id=KKZ54312.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 21461 21778 . - . ID=gene-AAX15_06275;Name=AAX15_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06275 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 21461 21778 . - 0 ID=cds-KKZ54313.1;Parent=gene-AAX15_06275;Dbxref=NCBI_GP:KKZ54313.1;Name=KKZ54313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629943.1;locus_tag=AAX15_06275;product=thiosulfate sulfurtransferase;protein_id=KKZ54313.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 21779 22657 . - . ID=gene-AAX15_06280;Name=AAX15_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06280 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 21779 22657 . - 0 ID=cds-KKZ54314.1;Parent=gene-AAX15_06280;Dbxref=NCBI_GP:KKZ54314.1;Name=KKZ54314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633165.1;locus_tag=AAX15_06280;product=permease;protein_id=KKZ54314.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 22689 23567 . - . ID=gene-AAX15_06285;Name=AAX15_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06285 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 22689 23567 . - 0 ID=cds-KKZ54315.1;Parent=gene-AAX15_06285;Dbxref=NCBI_GP:KKZ54315.1;Name=KKZ54315.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500710.1;locus_tag=AAX15_06285;product=transcriptional regulator;protein_id=KKZ54315.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 24253 25731 . + . ID=gene-AAX15_06290;Name=AAX15_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06290 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 24253 25731 . + 0 ID=cds-KKZ54316.1;Parent=gene-AAX15_06290;Dbxref=NCBI_GP:KKZ54316.1;Name=KKZ54316.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661223.1;locus_tag=AAX15_06290;product=ketol-acid reductoisomerase;protein_id=KKZ54316.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 25795 27447 . - . ID=gene-AAX15_06295;Name=AAX15_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06295 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 25795 27447 . - 0 ID=cds-KKZ54317.1;Parent=gene-AAX15_06295;Dbxref=NCBI_GP:KKZ54317.1;Name=KKZ54317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692659.1;locus_tag=AAX15_06295;product=alpha-D-phosphohexomutase;protein_id=KKZ54317.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 27683 31162 . + . ID=gene-AAX15_06300;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AAX15_06300 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 27683 31162 . + 0 ID=cds-KKZ54318.1;Parent=gene-AAX15_06300;Dbxref=NCBI_GP:KKZ54318.1;Name=KKZ54318.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701839.1;locus_tag=AAX15_06300;product=DNA polymerase III subunit alpha;protein_id=KKZ54318.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 31201 32742 . - . ID=gene-AAX15_06305;Name=AAX15_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06305 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 31201 32742 . - 0 ID=cds-KKZ54319.1;Parent=gene-AAX15_06305;Dbxref=NCBI_GP:KKZ54319.1;Name=KKZ54319.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551086.1;locus_tag=AAX15_06305;product=threonine dehydratase;protein_id=KKZ54319.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 32823 34661 . - . ID=gene-AAX15_06310;Name=AAX15_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06310 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 32823 34661 . - 0 ID=cds-KKZ54320.1;Parent=gene-AAX15_06310;Dbxref=NCBI_GP:KKZ54320.1;Name=KKZ54320.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UHP2.1;locus_tag=AAX15_06310;product=dihydroxy-acid dehydratase;protein_id=KKZ54320.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 34721 34939 . - . ID=gene-AAX15_06315;Name=AAX15_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06315 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 34721 34939 . - 0 ID=cds-KKZ54321.1;Parent=gene-AAX15_06315;Dbxref=NCBI_GP:KKZ54321.1;Name=KKZ54321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629221.1;locus_tag=AAX15_06315;product=acetolactate synthase;protein_id=KKZ54321.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 34939 36597 . - . ID=gene-AAX15_06320;Name=AAX15_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06320 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 34939 36597 . - 0 ID=cds-KKZ54322.1;Parent=gene-AAX15_06320;Dbxref=NCBI_GP:KKZ54322.1;Name=KKZ54322.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632674.1;locus_tag=AAX15_06320;product=acetolactate synthase catalytic subunit;protein_id=KKZ54322.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 36843 38369 . + . ID=gene-AAX15_06325;Name=AAX15_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06325 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 36843 38369 . + 0 ID=cds-KKZ54323.1;Parent=gene-AAX15_06325;Dbxref=NCBI_GP:KKZ54323.1;Name=KKZ54323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995395.1;locus_tag=AAX15_06325;product=transporter;protein_id=KKZ54323.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 38371 38466 . + . ID=gene-AAX15_06330;Name=AAX15_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06330 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 38371 38466 . + 0 ID=cds-KKZ54324.1;Parent=gene-AAX15_06330;Dbxref=NCBI_GP:KKZ54324.1;Name=KKZ54324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629210.1;locus_tag=AAX15_06330;product=membrane protein;protein_id=KKZ54324.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 38747 40987 . - . ID=gene-AAX15_06335;Name=AAX15_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06335 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 38747 40987 . - 0 ID=cds-KKZ54325.1;Parent=gene-AAX15_06335;Dbxref=NCBI_GP:KKZ54325.1;Name=KKZ54325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639830.1;locus_tag=AAX15_06335;product=nitric oxide reductase large subunit;protein_id=KKZ54325.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 41376 42506 . + . ID=gene-AAX15_06340;Name=AAX15_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06340 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 41376 42506 . + 0 ID=cds-KKZ54326.1;Parent=gene-AAX15_06340;Dbxref=NCBI_GP:KKZ54326.1;Name=KKZ54326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644539.1;locus_tag=AAX15_06340;product=methylamine utilization protein MauG;protein_id=KKZ54326.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 42587 44173 . + . ID=gene-AAX15_06345;Name=AAX15_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06345 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 42587 44173 . + 0 ID=cds-KKZ54327.1;Parent=gene-AAX15_06345;Dbxref=NCBI_GP:KKZ54327.1;Name=KKZ54327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635694.1;locus_tag=AAX15_06345;product=recombinase RmuC;protein_id=KKZ54327.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Protein Homology pseudogene 44338 44890 . + . ID=gene-AAX15_06350;Name=AAX15_06350;Note=disrupted;description=membrane protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_06350;pseudo=true GCA_001008275.1|LCTH01000038.1 Genbank gene 44999 46201 . - . ID=gene-AAX15_06355;Name=AAX15_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06355 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 44999 46201 . - 0 ID=cds-KKZ54328.1;Parent=gene-AAX15_06355;Dbxref=NCBI_GP:KKZ54328.1;Name=KKZ54328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44727.1;locus_tag=AAX15_06355;product=tyrosine transporter;protein_id=KKZ54328.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 46382 47245 . + . ID=gene-AAX15_06360;Name=AAX15_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06360 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 46382 47245 . + 0 ID=cds-KKZ54329.1;Parent=gene-AAX15_06360;Dbxref=NCBI_GP:KKZ54329.1;Name=KKZ54329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272075.1;locus_tag=AAX15_06360;product=hypothetical protein;protein_id=KKZ54329.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 47255 48097 . + . ID=gene-AAX15_06365;Name=AAX15_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06365 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 47255 48097 . + 0 ID=cds-KKZ54330.1;Parent=gene-AAX15_06365;Dbxref=NCBI_GP:KKZ54330.1;Name=KKZ54330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652074.1;locus_tag=AAX15_06365;product=hypothetical protein;protein_id=KKZ54330.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 48128 49015 . - . ID=gene-AAX15_06370;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AAX15_06370 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 48128 49015 . - 0 ID=cds-KKZ54331.1;Parent=gene-AAX15_06370;Dbxref=NCBI_GP:KKZ54331.1;Name=KKZ54331.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995253.1;locus_tag=AAX15_06370;product=site-specific tyrosine recombinase XerC;protein_id=KKZ54331.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 49015 49449 . - . ID=gene-AAX15_06375;Name=AAX15_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06375 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 49015 49449 . - 0 ID=cds-KKZ54332.1;Parent=gene-AAX15_06375;Dbxref=NCBI_GP:KKZ54332.1;Name=KKZ54332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629228.1;locus_tag=AAX15_06375;product=hypothetical protein;protein_id=KKZ54332.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 49615 50406 . + . ID=gene-AAX15_06380;Name=AAX15_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06380 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 49615 50406 . + 0 ID=cds-KKZ54333.1;Parent=gene-AAX15_06380;Dbxref=NCBI_GP:KKZ54333.1;Name=KKZ54333.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694828.1;locus_tag=AAX15_06380;product=triosephosphate isomerase;protein_id=KKZ54333.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 50767 53661 . - . ID=gene-AAX15_06385;Name=AAX15_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06385 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 50767 53661 . - 0 ID=cds-KKZ54334.1;Parent=gene-AAX15_06385;Dbxref=NCBI_GP:KKZ54334.1;Name=KKZ54334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635281.1;locus_tag=AAX15_06385;product=ligand-gated channel protein;protein_id=KKZ54334.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 53767 56844 . - . ID=gene-AAX15_06390;Name=AAX15_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06390 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 53767 56844 . - 0 ID=cds-KKZ54335.1;Parent=gene-AAX15_06390;Dbxref=NCBI_GP:KKZ54335.1;Name=KKZ54335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638394.1;locus_tag=AAX15_06390;product=TonB-dependent receptor;protein_id=KKZ54335.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 57109 58854 . + . ID=gene-AAX15_06395;Name=AAX15_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06395 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 57109 58854 . + 0 ID=cds-KKZ54336.1;Parent=gene-AAX15_06395;Dbxref=NCBI_GP:KKZ54336.1;Name=KKZ54336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055159.1;locus_tag=AAX15_06395;product=ABC transporter ATP-binding protein;protein_id=KKZ54336.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 58847 60505 . + . ID=gene-AAX15_06400;Name=AAX15_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06400 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 58847 60505 . + 0 ID=cds-KKZ54337.1;Parent=gene-AAX15_06400;Dbxref=NCBI_GP:KKZ54337.1;Name=KKZ54337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697033.1;locus_tag=AAX15_06400;product=ABC transporter ATP-binding protein;protein_id=KKZ54337.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 60895 61830 . - . ID=gene-AAX15_06405;Name=AAX15_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06405 GCA_001008275.1|LCTH01000038.1 Protein Homology CDS 60895 61830 . - 0 ID=cds-KKZ54338.1;Parent=gene-AAX15_06405;Dbxref=NCBI_GP:KKZ54338.1;Name=KKZ54338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661939.1;locus_tag=AAX15_06405;product=pantothenate kinase;protein_id=KKZ54338.1;transl_table=11 GCA_001008275.1|LCTH01000038.1 Genbank gene 62045 62120 . + . ID=gene-AAX15_06410;Name=AAX15_06410;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06410 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 62045 62120 . + . ID=rna-AAX15_06410;Parent=gene-AAX15_06410;anticodon=(pos:62078..62080);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06410;product=tRNA-Thr GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 62045 62120 . + . ID=exon-AAX15_06410-1;Parent=rna-AAX15_06410;anticodon=(pos:62078..62080);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06410;product=tRNA-Thr GCA_001008275.1|LCTH01000038.1 Genbank gene 62151 62235 . + . ID=gene-AAX15_06415;Name=AAX15_06415;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06415 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 62151 62235 . + . ID=rna-AAX15_06415;Parent=gene-AAX15_06415;anticodon=(pos:62185..62187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06415;product=tRNA-Tyr GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 62151 62235 . + . ID=exon-AAX15_06415-1;Parent=rna-AAX15_06415;anticodon=(pos:62185..62187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06415;product=tRNA-Tyr GCA_001008275.1|LCTH01000038.1 Genbank gene 62278 62352 . + . ID=gene-AAX15_06420;Name=AAX15_06420;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06420 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 62278 62352 . + . ID=rna-AAX15_06420;Parent=gene-AAX15_06420;anticodon=(pos:62311..62313);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06420;product=tRNA-Gly GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 62278 62352 . + . ID=exon-AAX15_06420-1;Parent=rna-AAX15_06420;anticodon=(pos:62311..62313);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06420;product=tRNA-Gly GCA_001008275.1|LCTH01000038.1 Genbank gene 62356 62431 . + . ID=gene-AAX15_06425;Name=AAX15_06425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06425 GCA_001008275.1|LCTH01000038.1 tRNAscan-SE tRNA 62356 62431 . + . ID=rna-AAX15_06425;Parent=gene-AAX15_06425;anticodon=(pos:62389..62391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06425;product=tRNA-Thr GCA_001008275.1|LCTH01000038.1 tRNAscan-SE exon 62356 62431 . + . ID=exon-AAX15_06425-1;Parent=rna-AAX15_06425;anticodon=(pos:62389..62391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06425;product=tRNA-Thr ##sequence-region LCTH01000039.1 1 1115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000039.1 Genbank region 1 1115 . + . ID=LCTH01000039.1:1..1115;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000039.1 Genbank gene 45 1115 . - . ID=gene-AAX15_06430;Name=AAX15_06430;end_range=1115,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_06430;partial=true GCA_001008275.1|LCTH01000039.1 Genbank rRNA 45 1115 . - . ID=rna-AAX15_06430;Parent=gene-AAX15_06430;end_range=1115,.;gbkey=rRNA;locus_tag=AAX15_06430;partial=true;product=16S ribosomal RNA GCA_001008275.1|LCTH01000039.1 Genbank exon 45 1115 . - . ID=exon-AAX15_06430-1;Parent=rna-AAX15_06430;end_range=1115,.;gbkey=rRNA;locus_tag=AAX15_06430;partial=true;product=16S ribosomal RNA ##sequence-region LCTH01000040.1 1 33177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000040.1 Genbank region 1 33177 . + . ID=LCTH01000040.1:1..33177;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000040.1 Genbank gene 1 241 . + . ID=gene-AAX15_06435;Name=AAX15_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06435;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000040.1 GeneMarkS+ CDS 1 241 . + 1 ID=cds-KKZ54109.1;Parent=gene-AAX15_06435;Dbxref=NCBI_GP:KKZ54109.1;Name=KKZ54109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_06435;partial=true;product=hypothetical protein;protein_id=KKZ54109.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 326 2044 . + . ID=gene-AAX15_06440;Name=AAX15_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06440 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 326 2044 . + 0 ID=cds-KKZ54110.1;Parent=gene-AAX15_06440;Dbxref=NCBI_GP:KKZ54110.1;Name=KKZ54110.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDZ4.1;locus_tag=AAX15_06440;product=proline--tRNA ligase;protein_id=KKZ54110.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 2133 4481 . - . ID=gene-AAX15_06445;Name=AAX15_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06445 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 2133 4481 . - 0 ID=cds-KKZ54111.1;Parent=gene-AAX15_06445;Dbxref=NCBI_GP:KKZ54111.1;Name=KKZ54111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646150.1;locus_tag=AAX15_06445;product=LPS biosynthesis protein;protein_id=KKZ54111.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 4645 5115 . - . ID=gene-AAX15_06450;Name=AAX15_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06450 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 4645 5115 . - 0 ID=cds-KKZ54112.1;Parent=gene-AAX15_06450;Dbxref=NCBI_GP:KKZ54112.1;Name=KKZ54112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641009.1;locus_tag=AAX15_06450;product=hypothetical protein;protein_id=KKZ54112.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 5180 6589 . - . ID=gene-AAX15_06455;Name=AAX15_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06455 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 5180 6589 . - 0 ID=cds-KKZ54113.1;Parent=gene-AAX15_06455;Dbxref=NCBI_GP:KKZ54113.1;Name=KKZ54113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551089.1;locus_tag=AAX15_06455;product=cell division protein FtsQ;protein_id=KKZ54113.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 6591 7313 . - . ID=gene-AAX15_06460;Name=AAX15_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06460 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 6591 7313 . - 0 ID=cds-KKZ54114.1;Parent=gene-AAX15_06460;Dbxref=NCBI_GP:KKZ54114.1;Name=KKZ54114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551088.1;locus_tag=AAX15_06460;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=KKZ54114.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 7399 8112 . + . ID=gene-AAX15_06465;Name=AAX15_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06465 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 7399 8112 . + 0 ID=cds-KKZ54115.1;Parent=gene-AAX15_06465;Dbxref=NCBI_GP:KKZ54115.1;Name=KKZ54115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669966.1;locus_tag=AAX15_06465;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=KKZ54115.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 8145 8960 . - . ID=gene-AAX15_06470;Name=AAX15_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06470 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 8145 8960 . - 0 ID=cds-KKZ54116.1;Parent=gene-AAX15_06470;Dbxref=NCBI_GP:KKZ54116.1;Name=KKZ54116.1;Note=catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499695.1;locus_tag=AAX15_06470;product=shikimate dehydrogenase;protein_id=KKZ54116.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 8970 9773 . - . ID=gene-AAX15_06475;Name=AAX15_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06475 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 8970 9773 . - 0 ID=cds-KKZ54117.1;Parent=gene-AAX15_06475;Dbxref=NCBI_GP:KKZ54117.1;Name=KKZ54117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550529.1;locus_tag=AAX15_06475;product=serine acetyltransferase;protein_id=KKZ54117.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 9903 12434 . - . ID=gene-AAX15_06480;Name=AAX15_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06480 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 9903 12434 . - 0 ID=cds-KKZ54118.1;Parent=gene-AAX15_06480;Dbxref=NCBI_GP:KKZ54118.1;Name=KKZ54118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499696.1;locus_tag=AAX15_06480;product=adenylate cyclase;protein_id=KKZ54118.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 12800 14044 . + . ID=gene-AAX15_06485;Name=AAX15_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06485 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 12800 14044 . + 0 ID=cds-KKZ54119.1;Parent=gene-AAX15_06485;Dbxref=NCBI_GP:KKZ54119.1;Name=KKZ54119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632952.1;locus_tag=AAX15_06485;product=HemX protein;protein_id=KKZ54119.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 14054 15340 . + . ID=gene-AAX15_06490;Name=AAX15_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06490 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 14054 15340 . + 0 ID=cds-KKZ54120.1;Parent=gene-AAX15_06490;Dbxref=NCBI_GP:KKZ54120.1;Name=KKZ54120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499699.1;locus_tag=AAX15_06490;product=heme biosynthesis protein HemY;protein_id=KKZ54120.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 15405 15824 . - . ID=gene-AAX15_06495;Name=AAX15_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06495 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 15405 15824 . - 0 ID=cds-KKZ54121.1;Parent=gene-AAX15_06495;Dbxref=NCBI_GP:KKZ54121.1;Name=KKZ54121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632950.1;locus_tag=AAX15_06495;product=phosphate-starvation-inducible PsiE;protein_id=KKZ54121.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 15890 16165 . - . ID=gene-AAX15_06500;Name=AAX15_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06500 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 15890 16165 . - 0 ID=cds-KKZ54122.1;Parent=gene-AAX15_06500;Dbxref=NCBI_GP:KKZ54122.1;Name=KKZ54122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625593.1;locus_tag=AAX15_06500;product=transposase;protein_id=KKZ54122.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 16252 16764 . - . ID=gene-AAX15_06505;Name=AAX15_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06505 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 16252 16764 . - 0 ID=cds-KKZ54123.1;Parent=gene-AAX15_06505;Dbxref=NCBI_GP:KKZ54123.1;Name=KKZ54123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700096.1;locus_tag=AAX15_06505;product=hypothetical protein;protein_id=KKZ54123.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 16828 17460 . - . ID=gene-AAX15_06510;Name=AAX15_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06510 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 16828 17460 . - 0 ID=cds-KKZ54124.1;Parent=gene-AAX15_06510;Dbxref=NCBI_GP:KKZ54124.1;Name=KKZ54124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700156.1;locus_tag=AAX15_06510;product=hypothetical protein;protein_id=KKZ54124.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 17720 18349 . - . ID=gene-AAX15_06515;Name=AAX15_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06515 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 17720 18349 . - 0 ID=cds-KKZ54125.1;Parent=gene-AAX15_06515;Dbxref=NCBI_GP:KKZ54125.1;Name=KKZ54125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635621.1;locus_tag=AAX15_06515;product=membrane protein;protein_id=KKZ54125.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 18478 22371 . - . ID=gene-AAX15_06520;Name=AAX15_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06520 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 18478 22371 . - 0 ID=cds-KKZ54126.1;Parent=gene-AAX15_06520;Dbxref=NCBI_GP:KKZ54126.1;Name=KKZ54126.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694794.1;locus_tag=AAX15_06520;product=phosphoribosylformylglycinamidine synthase;protein_id=KKZ54126.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 22501 23325 . - . ID=gene-AAX15_06525;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AAX15_06525 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 22501 23325 . - 0 ID=cds-KKZ54127.1;Parent=gene-AAX15_06525;Dbxref=NCBI_GP:KKZ54127.1;Name=KKZ54127.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44859.1;locus_tag=AAX15_06525;product=diaminopimelate epimerase;protein_id=KKZ54127.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 23468 24091 . - . ID=gene-AAX15_06530;Name=AAX15_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06530 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 23468 24091 . - 0 ID=cds-KKZ54128.1;Parent=gene-AAX15_06530;Dbxref=NCBI_GP:KKZ54128.1;Name=KKZ54128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632942.1;locus_tag=AAX15_06530;product=LexA family transcriptional regulator;protein_id=KKZ54128.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 24266 26695 . + . ID=gene-AAX15_06535;Name=AAX15_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06535 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 24266 26695 . + 0 ID=cds-KKZ54129.1;Parent=gene-AAX15_06535;Dbxref=NCBI_GP:KKZ54129.1;Name=KKZ54129.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499704.1;locus_tag=AAX15_06535;product=glycerol-3-phosphate acyltransferase;protein_id=KKZ54129.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 27100 28152 . - . ID=gene-AAX15_06540;Name=AAX15_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06540 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 27100 28152 . - 0 ID=cds-KKZ54130.1;Parent=gene-AAX15_06540;Dbxref=NCBI_GP:KKZ54130.1;Name=KKZ54130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659745.1;locus_tag=AAX15_06540;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=KKZ54130.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 28294 29589 . + . ID=gene-AAX15_06545;Name=AAX15_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06545 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 28294 29589 . + 0 ID=cds-KKZ54131.1;Parent=gene-AAX15_06545;Dbxref=NCBI_GP:KKZ54131.1;Name=KKZ54131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629403.1;locus_tag=AAX15_06545;product=oxidoreductase;protein_id=KKZ54131.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 29621 30022 . - . ID=gene-AAX15_06550;Name=AAX15_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06550 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 29621 30022 . - 0 ID=cds-KKZ54132.1;Parent=gene-AAX15_06550;Dbxref=NCBI_GP:KKZ54132.1;Name=KKZ54132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635674.1;locus_tag=AAX15_06550;product=hypothetical protein;protein_id=KKZ54132.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 30137 30739 . + . ID=gene-AAX15_06555;Name=AAX15_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06555 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 30137 30739 . + 0 ID=cds-KKZ54133.1;Parent=gene-AAX15_06555;Dbxref=NCBI_GP:KKZ54133.1;Name=KKZ54133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688685.1;locus_tag=AAX15_06555;product=hypothetical protein;protein_id=KKZ54133.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 30739 31212 . + . ID=gene-AAX15_06560;Name=AAX15_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06560 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 30739 31212 . + 0 ID=cds-KKZ54134.1;Parent=gene-AAX15_06560;Dbxref=NCBI_GP:KKZ54134.1;Name=KKZ54134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644300.1;locus_tag=AAX15_06560;product=membrane protein;protein_id=KKZ54134.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 31399 31902 . + . ID=gene-AAX15_06565;Name=AAX15_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06565 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 31399 31902 . + 0 ID=cds-KKZ54135.1;Parent=gene-AAX15_06565;Dbxref=NCBI_GP:KKZ54135.1;Name=KKZ54135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5U9Z9.1;locus_tag=AAX15_06565;product=S-ribosylhomocysteinase;protein_id=KKZ54135.1;transl_table=11 GCA_001008275.1|LCTH01000040.1 Genbank gene 31911 33092 . + . ID=gene-AAX15_06570;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=AAX15_06570 GCA_001008275.1|LCTH01000040.1 Protein Homology CDS 31911 33092 . + 0 ID=cds-KKZ54136.1;Parent=gene-AAX15_06570;Dbxref=NCBI_GP:KKZ54136.1;Name=KKZ54136.1;Note=non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis;gbkey=CDS;gene=purT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636153.1;locus_tag=AAX15_06570;product=phosphoribosylglycinamide formyltransferase;protein_id=KKZ54136.1;transl_table=11 ##sequence-region LCTH01000041.1 1 27673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000041.1 Genbank region 1 27673 . + . ID=LCTH01000041.1:1..27673;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000041.1 Genbank gene 1 576 . + . ID=gene-AAX15_06575;Name=AAX15_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06575;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 1 576 . + 0 ID=cds-KKZ54069.1;Parent=gene-AAX15_06575;Dbxref=NCBI_GP:KKZ54069.1;Name=KKZ54069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356869.1;locus_tag=AAX15_06575;partial=true;product=50S ribosomal protein L1;protein_id=KKZ54069.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 960 4988 . + . ID=gene-AAX15_06580;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AAX15_06580 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 960 4988 . + 0 ID=cds-KKZ54070.1;Parent=gene-AAX15_06580;Dbxref=NCBI_GP:KKZ54070.1;Name=KKZ54070.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43738.1;locus_tag=AAX15_06580;product=DNA-directed RNA polymerase subunit beta;protein_id=KKZ54070.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 5114 9364 . + . ID=gene-AAX15_06585;Name=AAX15_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06585 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 5114 9364 . + 0 ID=cds-KKZ54071.1;Parent=gene-AAX15_06585;Dbxref=NCBI_GP:KKZ54071.1;Name=KKZ54071.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526426.1;locus_tag=AAX15_06585;product=DNA-directed RNA polymerase subunit beta';protein_id=KKZ54071.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 9421 11061 . - . ID=gene-AAX15_06590;Name=AAX15_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06590 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 9421 11061 . - 0 ID=cds-KKZ54072.1;Parent=gene-AAX15_06590;Dbxref=NCBI_GP:KKZ54072.1;Name=KKZ54072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355947.1;locus_tag=AAX15_06590;product=sulfatase;protein_id=KKZ54072.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 11216 11776 . - . ID=gene-AAX15_06595;Name=AAX15_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06595 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 11216 11776 . - 0 ID=cds-KKZ54073.1;Parent=gene-AAX15_06595;Dbxref=NCBI_GP:KKZ54073.1;Name=KKZ54073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064643.1;locus_tag=AAX15_06595;product=hypothetical protein;protein_id=KKZ54073.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 12143 13087 . + . ID=gene-AAX15_06600;Name=AAX15_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06600 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 12143 13087 . + 0 ID=cds-KKZ54074.1;Parent=gene-AAX15_06600;Dbxref=NCBI_GP:KKZ54074.1;Name=KKZ54074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636629.1;locus_tag=AAX15_06600;product=tellurite resistance protein TehA;protein_id=KKZ54074.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 13139 13858 . - . ID=gene-AAX15_06605;Name=AAX15_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06605 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 13139 13858 . - 0 ID=cds-KKZ54075.1;Parent=gene-AAX15_06605;Dbxref=NCBI_GP:KKZ54075.1;Name=KKZ54075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500438.1;locus_tag=AAX15_06605;product=tRNA (adenine(37)-N6)-methyltransferase;protein_id=KKZ54075.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 13920 14831 . + . ID=gene-AAX15_06610;Name=AAX15_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06610 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 13920 14831 . + 0 ID=cds-KKZ54076.1;Parent=gene-AAX15_06610;Dbxref=NCBI_GP:KKZ54076.1;Name=KKZ54076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636626.1;locus_tag=AAX15_06610;product=1%2C4-dihydroxy-2-naphthoate prenyltransferase;protein_id=KKZ54076.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 14883 15380 . + . ID=gene-AAX15_06615;Name=AAX15_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06615 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 14883 15380 . + 0 ID=cds-KKZ54077.1;Parent=gene-AAX15_06615;Dbxref=NCBI_GP:KKZ54077.1;Name=KKZ54077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500440.1;locus_tag=AAX15_06615;product=regulator of ribonuclease activity A;protein_id=KKZ54077.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 15535 16920 . + . ID=gene-AAX15_06620;Name=AAX15_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06620 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 15535 16920 . + 0 ID=cds-KKZ54078.1;Parent=gene-AAX15_06620;Dbxref=NCBI_GP:KKZ54078.1;Name=KKZ54078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636624.1;locus_tag=AAX15_06620;product=transporter;protein_id=KKZ54078.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 17023 17871 . - . ID=gene-AAX15_06625;Name=AAX15_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06625 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 17023 17871 . - 0 ID=cds-KKZ54079.1;Parent=gene-AAX15_06625;Dbxref=NCBI_GP:KKZ54079.1;Name=KKZ54079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629614.1;locus_tag=AAX15_06625;product=methenyltetrahydrofolate cyclohydrolase;protein_id=KKZ54079.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 18050 18126 . + . ID=gene-AAX15_06630;Name=AAX15_06630;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06630 GCA_001008275.1|LCTH01000041.1 tRNAscan-SE tRNA 18050 18126 . + . ID=rna-AAX15_06630;Parent=gene-AAX15_06630;anticodon=(pos:18084..18086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06630;product=tRNA-Pro GCA_001008275.1|LCTH01000041.1 tRNAscan-SE exon 18050 18126 . + . ID=exon-AAX15_06630-1;Parent=rna-AAX15_06630;anticodon=(pos:18084..18086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06630;product=tRNA-Pro GCA_001008275.1|LCTH01000041.1 Genbank gene 18174 18250 . + . ID=gene-AAX15_06635;Name=AAX15_06635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_06635 GCA_001008275.1|LCTH01000041.1 tRNAscan-SE tRNA 18174 18250 . + . ID=rna-AAX15_06635;Parent=gene-AAX15_06635;anticodon=(pos:18208..18210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06635;product=tRNA-Arg GCA_001008275.1|LCTH01000041.1 tRNAscan-SE exon 18174 18250 . + . ID=exon-AAX15_06635-1;Parent=rna-AAX15_06635;anticodon=(pos:18208..18210);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_06635;product=tRNA-Arg GCA_001008275.1|LCTH01000041.1 Genbank gene 18361 21132 . + . ID=gene-AAX15_06640;Name=AAX15_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06640 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 18361 21132 . + 0 ID=cds-KKZ54080.1;Parent=gene-AAX15_06640;Dbxref=NCBI_GP:KKZ54080.1;Name=KKZ54080.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526314.1;locus_tag=AAX15_06640;product=ATP-dependent helicase;protein_id=KKZ54080.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 21135 21794 . + . ID=gene-AAX15_06645;Name=AAX15_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06645 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 21135 21794 . + 0 ID=cds-KKZ54081.1;Parent=gene-AAX15_06645;Dbxref=NCBI_GP:KKZ54081.1;Name=KKZ54081.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500445.1;locus_tag=AAX15_06645;product=23S rRNA pseudouridylate synthase;protein_id=KKZ54081.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 21821 22399 . + . ID=gene-AAX15_06650;Name=AAX15_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06650 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 21821 22399 . + 0 ID=cds-KKZ54082.1;Parent=gene-AAX15_06650;Dbxref=NCBI_GP:KKZ54082.1;Name=KKZ54082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500446.1;locus_tag=AAX15_06650;product=peptidase S54;protein_id=KKZ54082.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 22429 23181 . + . ID=gene-AAX15_06655;Name=AAX15_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06655 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 22429 23181 . + 0 ID=cds-KKZ54083.1;Parent=gene-AAX15_06655;Dbxref=NCBI_GP:KKZ54083.1;Name=KKZ54083.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630812.1;locus_tag=AAX15_06655;product=transcriptional regulator;protein_id=KKZ54083.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 23309 24061 . + . ID=gene-AAX15_06660;Name=AAX15_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06660 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 23309 24061 . + 0 ID=cds-KKZ54084.1;Parent=gene-AAX15_06660;Dbxref=NCBI_GP:KKZ54084.1;Name=KKZ54084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500450.1;locus_tag=AAX15_06660;product=hypothetical protein;protein_id=KKZ54084.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 24119 24508 . + . ID=gene-AAX15_06665;Name=AAX15_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06665 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 24119 24508 . + 0 ID=cds-KKZ54085.1;Parent=gene-AAX15_06665;Dbxref=NCBI_GP:KKZ54085.1;Name=KKZ54085.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665559.1;locus_tag=AAX15_06665;product=endoribonuclease L-PSP;protein_id=KKZ54085.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 24651 25115 . + . ID=gene-AAX15_06670;Name=AAX15_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06670 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 24651 25115 . + 0 ID=cds-KKZ54086.1;Parent=gene-AAX15_06670;Dbxref=NCBI_GP:KKZ54086.1;Name=KKZ54086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356544.1;locus_tag=AAX15_06670;product=hypothetical protein;protein_id=KKZ54086.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 25137 25559 . - . ID=gene-AAX15_06675;Name=AAX15_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06675 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 25137 25559 . - 0 ID=cds-KKZ54087.1;Parent=gene-AAX15_06675;Dbxref=NCBI_GP:KKZ54087.1;Name=KKZ54087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356545.1;locus_tag=AAX15_06675;product=hypothetical protein;protein_id=KKZ54087.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 25564 26601 . - . ID=gene-AAX15_06680;Name=AAX15_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06680 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 25564 26601 . - 0 ID=cds-KKZ54088.1;Parent=gene-AAX15_06680;Dbxref=NCBI_GP:KKZ54088.1;Name=KKZ54088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699614.1;locus_tag=AAX15_06680;product=transposase;protein_id=KKZ54088.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 26711 27058 . + . ID=gene-AAX15_06685;Name=AAX15_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06685 GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 26711 27058 . + 0 ID=cds-KKZ54089.1;Parent=gene-AAX15_06685;Dbxref=NCBI_GP:KKZ54089.1;Name=KKZ54089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759366.1;locus_tag=AAX15_06685;product=DNA-binding protein;protein_id=KKZ54089.1;transl_table=11 GCA_001008275.1|LCTH01000041.1 Genbank gene 27048 27673 . + . ID=gene-AAX15_06690;Name=AAX15_06690;end_range=27673,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06690;partial=true GCA_001008275.1|LCTH01000041.1 Protein Homology CDS 27048 27673 . + 0 ID=cds-KKZ54090.1;Parent=gene-AAX15_06690;Dbxref=NCBI_GP:KKZ54090.1;Name=KKZ54090.1;end_range=27673,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759372.1;locus_tag=AAX15_06690;partial=true;product=DNA methylase N-4;protein_id=KKZ54090.1;transl_table=11 ##sequence-region LCTH01000042.1 1 25788 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000042.1 Genbank region 1 25788 . + . ID=LCTH01000042.1:1..25788;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000042.1 Genbank gene 1 537 . - . ID=gene-AAX15_06695;Name=AAX15_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06695;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 1 537 . - 0 ID=cds-KKZ54034.1;Parent=gene-AAX15_06695;Dbxref=NCBI_GP:KKZ54034.1;Name=KKZ54034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648428.1;locus_tag=AAX15_06695;partial=true;product=50S ribosomal protein L2;protein_id=KKZ54034.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 555 854 . - . ID=gene-AAX15_06700;Name=AAX15_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06700 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 555 854 . - 0 ID=cds-KKZ54035.1;Parent=gene-AAX15_06700;Dbxref=NCBI_GP:KKZ54035.1;Name=KKZ54035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356228.1;locus_tag=AAX15_06700;product=50S ribosomal protein L23;protein_id=KKZ54035.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 851 1453 . - . ID=gene-AAX15_06705;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AAX15_06705 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 851 1453 . - 0 ID=cds-KKZ54036.1;Parent=gene-AAX15_06705;Dbxref=NCBI_GP:KKZ54036.1;Name=KKZ54036.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356227.1;locus_tag=AAX15_06705;product=50S ribosomal protein L4;protein_id=KKZ54036.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 1469 2095 . - . ID=gene-AAX15_06710;Name=AAX15_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06710 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 1469 2095 . - 0 ID=cds-KKZ54037.1;Parent=gene-AAX15_06710;Dbxref=NCBI_GP:KKZ54037.1;Name=KKZ54037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44344.1;locus_tag=AAX15_06710;product=50S ribosomal protein L3;protein_id=KKZ54037.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 2112 2423 . - . ID=gene-AAX15_06715;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=AAX15_06715 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 2112 2423 . - 0 ID=cds-KKZ54038.1;Parent=gene-AAX15_06715;Dbxref=NCBI_GP:KKZ54038.1;Name=KKZ54038.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AAX15_06715;product=30S ribosomal protein S10;protein_id=KKZ54038.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 2743 3675 . - . ID=gene-AAX15_06720;Name=AAX15_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06720 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 2743 3675 . - 0 ID=cds-KKZ54039.1;Parent=gene-AAX15_06720;Dbxref=NCBI_GP:KKZ54039.1;Name=KKZ54039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635731.1;locus_tag=AAX15_06720;product=cell division protein FtsX;protein_id=KKZ54039.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 3685 4341 . - . ID=gene-AAX15_06725;Name=AAX15_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06725 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 3685 4341 . - 0 ID=cds-KKZ54040.1;Parent=gene-AAX15_06725;Dbxref=NCBI_GP:KKZ54040.1;Name=KKZ54040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44871.1;locus_tag=AAX15_06725;product=cell division ATP-binding protein FtsE;protein_id=KKZ54040.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 4360 5706 . - . ID=gene-AAX15_06730;Name=AAX15_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06730 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 4360 5706 . - 0 ID=cds-KKZ54041.1;Parent=gene-AAX15_06730;Dbxref=NCBI_GP:KKZ54041.1;Name=KKZ54041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644572.1;locus_tag=AAX15_06730;product=cell division protein FtsY;protein_id=KKZ54041.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 5803 6384 . + . ID=gene-AAX15_06735;Name=AAX15_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06735 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 5803 6384 . + 0 ID=cds-KKZ54042.1;Parent=gene-AAX15_06735;Dbxref=NCBI_GP:KKZ54042.1;Name=KKZ54042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44869.1;locus_tag=AAX15_06735;product=16S rRNA methyltransferase;protein_id=KKZ54042.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 6395 6877 . + . ID=gene-AAX15_06740;Name=AAX15_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06740 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 6395 6877 . + 0 ID=cds-KKZ54043.1;Parent=gene-AAX15_06740;Dbxref=NCBI_GP:KKZ54043.1;Name=KKZ54043.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625919.1;locus_tag=AAX15_06740;product=rRNA methylase;protein_id=KKZ54043.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 6929 7576 . - . ID=gene-AAX15_06745;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AAX15_06745 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 6929 7576 . - 0 ID=cds-KKZ54044.1;Parent=gene-AAX15_06745;Dbxref=NCBI_GP:KKZ54044.1;Name=KKZ54044.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626122.1;locus_tag=AAX15_06745;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=KKZ54044.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 cmsearch binding_site 7665 7842 . - . ID=id-LCTH01000042.1:7665..7842;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=misc_binding GCA_001008275.1|LCTH01000042.1 Protein Homology pseudogene 7948 9060 . + . ID=gene-AAX15_06750;Name=AAX15_06750;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_06750;pseudo=true GCA_001008275.1|LCTH01000042.1 Genbank gene 9057 9737 . + . ID=gene-AAX15_06755;Name=AAX15_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06755 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 9057 9737 . + 0 ID=cds-KKZ54045.1;Parent=gene-AAX15_06755;Dbxref=NCBI_GP:KKZ54045.1;Name=KKZ54045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640958.1;locus_tag=AAX15_06755;product=hypothetical protein;protein_id=KKZ54045.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 9799 11469 . - . ID=gene-AAX15_06760;Name=AAX15_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06760 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 9799 11469 . - 0 ID=cds-KKZ54046.1;Parent=gene-AAX15_06760;Dbxref=NCBI_GP:KKZ54046.1;Name=KKZ54046.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662586.1;locus_tag=AAX15_06760;product=PTS system fructose-specific transporter subunits IIBC;protein_id=KKZ54046.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 11471 12412 . - . ID=gene-AAX15_06765;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AAX15_06765 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 11471 12412 . - 0 ID=cds-KKZ54047.1;Parent=gene-AAX15_06765;Dbxref=NCBI_GP:KKZ54047.1;Name=KKZ54047.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=EXISTENCE: similar to AA sequence:SwissProt:P44330.1;locus_tag=AAX15_06765;product=1-phosphofructokinase;protein_id=KKZ54047.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 12414 13913 . - . ID=gene-AAX15_06770;Name=AAX15_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06770 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 12414 13913 . - 0 ID=cds-KKZ54048.1;Parent=gene-AAX15_06770;Dbxref=NCBI_GP:KKZ54048.1;Name=KKZ54048.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44715.1;locus_tag=AAX15_06770;product=bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein;protein_id=KKZ54048.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 13984 14514 . - . ID=gene-AAX15_06775;Name=AAX15_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06775 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 13984 14514 . - 0 ID=cds-KKZ54049.1;Parent=gene-AAX15_06775;Dbxref=NCBI_GP:KKZ54049.1;Name=KKZ54049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526465.1;locus_tag=AAX15_06775;product=hypothetical protein;protein_id=KKZ54049.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 14610 14888 . - . ID=gene-AAX15_06780;Name=AAX15_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06780 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 14610 14888 . - 0 ID=cds-KKZ54050.1;Parent=gene-AAX15_06780;Dbxref=NCBI_GP:KKZ54050.1;Name=KKZ54050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656500.1;locus_tag=AAX15_06780;product=virulence factor;protein_id=KKZ54050.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 14897 15088 . - . ID=gene-AAX15_06785;Name=AAX15_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06785 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 14897 15088 . - 0 ID=cds-KKZ54051.1;Parent=gene-AAX15_06785;Dbxref=NCBI_GP:KKZ54051.1;Name=KKZ54051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272059.1;locus_tag=AAX15_06785;product=hypothetical protein;protein_id=KKZ54051.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 15159 16457 . - . ID=gene-AAX15_06790;Name=AAX15_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06790 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 15159 16457 . - 0 ID=cds-KKZ54052.1;Parent=gene-AAX15_06790;Dbxref=NCBI_GP:KKZ54052.1;Name=KKZ54052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632735.1;locus_tag=AAX15_06790;product=membrane protein;protein_id=KKZ54052.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 16508 17032 . - . ID=gene-AAX15_06795;Name=AAX15_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06795 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 16508 17032 . - 0 ID=cds-KKZ54053.1;Parent=gene-AAX15_06795;Dbxref=NCBI_GP:KKZ54053.1;Name=KKZ54053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701678.1;locus_tag=AAX15_06795;product=hypothetical protein;protein_id=KKZ54053.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 17059 17841 . - . ID=gene-AAX15_06800;Name=AAX15_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06800 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 17059 17841 . - 0 ID=cds-KKZ54054.1;Parent=gene-AAX15_06800;Dbxref=NCBI_GP:KKZ54054.1;Name=KKZ54054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527430.1;locus_tag=AAX15_06800;product=DNAse;protein_id=KKZ54054.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 17880 18860 . - . ID=gene-AAX15_06805;Name=AAX15_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06805 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 17880 18860 . - 0 ID=cds-KKZ54055.1;Parent=gene-AAX15_06805;Dbxref=NCBI_GP:KKZ54055.1;Name=KKZ54055.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055042.1;locus_tag=AAX15_06805;product=DNA polymerase III subunit delta';protein_id=KKZ54055.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 19178 21148 . + . ID=gene-AAX15_06810;Name=AAX15_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06810 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 19178 21148 . + 0 ID=cds-KKZ54061.1;Parent=gene-AAX15_06810;Dbxref=NCBI_GP:KKZ54061.1;Name=KKZ54061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995148.1;locus_tag=AAX15_06810;product=autotransporter;protein_id=KKZ54061.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 21215 21847 . - . ID=gene-AAX15_06815;Name=AAX15_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06815 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 21215 21847 . - 0 ID=cds-KKZ54056.1;Parent=gene-AAX15_06815;Dbxref=NCBI_GP:KKZ54056.1;Name=KKZ54056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44719.2;locus_tag=AAX15_06815;product=thymidylate kinase;protein_id=KKZ54056.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 21864 22910 . - . ID=gene-AAX15_06820;Name=AAX15_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06820 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 21864 22910 . - 0 ID=cds-KKZ54062.1;Parent=gene-AAX15_06820;Dbxref=NCBI_GP:KKZ54062.1;Name=KKZ54062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499640.1;locus_tag=AAX15_06820;product=aminodeoxychorismate lyase;protein_id=KKZ54062.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 22980 23915 . - . ID=gene-AAX15_06825;Name=AAX15_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06825 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 22980 23915 . - 0 ID=cds-KKZ54057.1;Parent=gene-AAX15_06825;Dbxref=NCBI_GP:KKZ54057.1;Name=KKZ54057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636202.1;locus_tag=AAX15_06825;product=peptidylprolyl isomerase;protein_id=KKZ54057.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 23991 24530 . - . ID=gene-AAX15_06830;Name=AAX15_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06830 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 23991 24530 . - 0 ID=cds-KKZ54058.1;Parent=gene-AAX15_06830;Dbxref=NCBI_GP:KKZ54058.1;Name=KKZ54058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44722.1;locus_tag=AAX15_06830;product=uracil phosphoribosyltransferase;protein_id=KKZ54058.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 24662 25453 . + . ID=gene-AAX15_06835;Name=AAX15_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06835 GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 24662 25453 . + 0 ID=cds-KKZ54059.1;Parent=gene-AAX15_06835;Dbxref=NCBI_GP:KKZ54059.1;Name=KKZ54059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656509.1;locus_tag=AAX15_06835;product=nucleoside triphosphate hydrolase;protein_id=KKZ54059.1;transl_table=11 GCA_001008275.1|LCTH01000042.1 Genbank gene 25502 25788 . - . ID=gene-AAX15_06840;Name=AAX15_06840;end_range=25788,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06840;partial=true GCA_001008275.1|LCTH01000042.1 Protein Homology CDS 25502 25788 . - 2 ID=cds-KKZ54060.1;Parent=gene-AAX15_06840;Dbxref=NCBI_GP:KKZ54060.1;Name=KKZ54060.1;end_range=25788,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644356.1;locus_tag=AAX15_06840;partial=true;product=membrane protein;protein_id=KKZ54060.1;transl_table=11 ##sequence-region LCTH01000043.1 1 5478 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000043.1 Genbank region 1 5478 . + . ID=LCTH01000043.1:1..5478;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000043.1 Genbank gene 1 1619 . - . ID=gene-AAX15_06845;Name=AAX15_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06845;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000043.1 Protein Homology CDS 1 1619 . - 0 ID=cds-KKZ54021.1;Parent=gene-AAX15_06845;Dbxref=NCBI_GP:KKZ54021.1;Name=KKZ54021.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500679.1;locus_tag=AAX15_06845;partial=true;product=ATP-dependent DNA helicase RecQ;protein_id=KKZ54021.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000043.1 Genbank gene 1621 1926 . - . ID=gene-AAX15_06850;Name=AAX15_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06850 GCA_001008275.1|LCTH01000043.1 Protein Homology CDS 1621 1926 . - 0 ID=cds-KKZ54022.1;Parent=gene-AAX15_06850;Dbxref=NCBI_GP:KKZ54022.1;Name=KKZ54022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626020.1;locus_tag=AAX15_06850;product=frataxin;protein_id=KKZ54022.1;transl_table=11 GCA_001008275.1|LCTH01000043.1 Genbank gene 2186 3433 . + . ID=gene-AAX15_06855;Name=AAX15_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06855 GCA_001008275.1|LCTH01000043.1 Protein Homology CDS 2186 3433 . + 0 ID=cds-KKZ54023.1;Parent=gene-AAX15_06855;Dbxref=NCBI_GP:KKZ54023.1;Name=KKZ54023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701826.1;locus_tag=AAX15_06855;product=diaminopimelate decarboxylase;protein_id=KKZ54023.1;transl_table=11 GCA_001008275.1|LCTH01000043.1 Genbank gene 3634 4260 . + . ID=gene-AAX15_06860;Name=AAX15_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06860 GCA_001008275.1|LCTH01000043.1 Protein Homology CDS 3634 4260 . + 0 ID=cds-KKZ54024.1;Parent=gene-AAX15_06860;Dbxref=NCBI_GP:KKZ54024.1;Name=KKZ54024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635583.1;locus_tag=AAX15_06860;product=nitrate/nitrite response regulator;protein_id=KKZ54024.1;transl_table=11 GCA_001008275.1|LCTH01000043.1 Genbank gene 4326 4766 . - . ID=gene-AAX15_06865;Name=AAX15_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06865 GCA_001008275.1|LCTH01000043.1 Protein Homology CDS 4326 4766 . - 0 ID=cds-KKZ54025.1;Parent=gene-AAX15_06865;Dbxref=NCBI_GP:KKZ54025.1;Name=KKZ54025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635581.1;locus_tag=AAX15_06865;product=hypothetical protein;protein_id=KKZ54025.1;transl_table=11 GCA_001008275.1|LCTH01000043.1 Genbank gene 4770 5330 . - . ID=gene-AAX15_06870;Name=AAX15_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06870 GCA_001008275.1|LCTH01000043.1 Protein Homology CDS 4770 5330 . - 0 ID=cds-KKZ54026.1;Parent=gene-AAX15_06870;Dbxref=NCBI_GP:KKZ54026.1;Name=KKZ54026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551091.1;locus_tag=AAX15_06870;product=aminotransferase;protein_id=KKZ54026.1;transl_table=11 ##sequence-region LCTH01000044.1 1 6045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000044.1 Genbank region 1 6045 . + . ID=LCTH01000044.1:1..6045;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000044.1 Genbank gene 1 1227 . - . ID=gene-AAX15_06875;Name=AAX15_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06875;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 1 1227 . - 0 ID=cds-KKZ54000.1;Parent=gene-AAX15_06875;Dbxref=NCBI_GP:KKZ54000.1;Name=KKZ54000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005762932.1;locus_tag=AAX15_06875;partial=true;product=cytidine deaminase;protein_id=KKZ54000.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000044.1 Genbank gene 1636 2913 . - . ID=gene-AAX15_06880;Name=AAX15_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06880 GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 1636 2913 . - 0 ID=cds-KKZ53994.1;Parent=gene-AAX15_06880;Dbxref=NCBI_GP:KKZ53994.1;Name=KKZ53994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707071.1;locus_tag=AAX15_06880;product=glucose-1-phosphatase;protein_id=KKZ53994.1;transl_table=11 GCA_001008275.1|LCTH01000044.1 Genbank gene 2923 3369 . - . ID=gene-AAX15_06885;Name=AAX15_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06885 GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 2923 3369 . - 0 ID=cds-KKZ53995.1;Parent=gene-AAX15_06885;Dbxref=NCBI_GP:KKZ53995.1;Name=KKZ53995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523658.1;locus_tag=AAX15_06885;product=hypothetical protein;protein_id=KKZ53995.1;transl_table=11 GCA_001008275.1|LCTH01000044.1 Genbank gene 3369 3749 . - . ID=gene-AAX15_06890;Name=AAX15_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06890 GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 3369 3749 . - 0 ID=cds-KKZ53996.1;Parent=gene-AAX15_06890;Dbxref=NCBI_GP:KKZ53996.1;Name=KKZ53996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500832.1;locus_tag=AAX15_06890;product=hypothetical protein;protein_id=KKZ53996.1;transl_table=11 GCA_001008275.1|LCTH01000044.1 Genbank gene 3751 4011 . - . ID=gene-AAX15_06895;Name=AAX15_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06895 GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 3751 4011 . - 0 ID=cds-KKZ53997.1;Parent=gene-AAX15_06895;Dbxref=NCBI_GP:KKZ53997.1;Name=KKZ53997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500831.1;locus_tag=AAX15_06895;product=hypothetical protein;protein_id=KKZ53997.1;transl_table=11 GCA_001008275.1|LCTH01000044.1 Genbank gene 4062 4976 . - . ID=gene-AAX15_06900;Name=AAX15_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06900 GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 4062 4976 . - 0 ID=cds-KKZ53998.1;Parent=gene-AAX15_06900;Dbxref=NCBI_GP:KKZ53998.1;Name=KKZ53998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669568.1;locus_tag=AAX15_06900;product=glycyl-tRNA synthetase;protein_id=KKZ53998.1;transl_table=11 GCA_001008275.1|LCTH01000044.1 Genbank gene 5129 6045 . - . ID=gene-AAX15_06905;Name=AAX15_06905;end_range=6045,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06905;partial=true GCA_001008275.1|LCTH01000044.1 Protein Homology CDS 5129 6045 . - 2 ID=cds-KKZ53999.1;Parent=gene-AAX15_06905;Dbxref=NCBI_GP:KKZ53999.1;Name=KKZ53999.1;end_range=6045,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241849.1;locus_tag=AAX15_06905;partial=true;product=adhesin;protein_id=KKZ53999.1;transl_table=11 ##sequence-region LCTH01000045.1 1 6888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000045.1 Genbank region 1 6888 . + . ID=LCTH01000045.1:1..6888;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000045.1 Genbank gene 33 1322 . - . ID=gene-AAX15_06910;Name=AAX15_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06910 GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 33 1322 . - 0 ID=cds-KKZ53907.1;Parent=gene-AAX15_06910;Dbxref=NCBI_GP:KKZ53907.1;Name=KKZ53907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001274619.1;locus_tag=AAX15_06910;product=hypothetical protein;protein_id=KKZ53907.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 1312 1716 . - . ID=gene-AAX15_06915;Name=AAX15_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06915 GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 1312 1716 . - 0 ID=cds-KKZ53908.1;Parent=gene-AAX15_06915;Dbxref=NCBI_GP:KKZ53908.1;Name=KKZ53908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001929432.1;locus_tag=AAX15_06915;product=hypothetical protein;protein_id=KKZ53908.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 1757 2047 . - . ID=gene-AAX15_06920;Name=AAX15_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06920 GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 1757 2047 . - 0 ID=cds-KKZ53909.1;Parent=gene-AAX15_06920;Dbxref=NCBI_GP:KKZ53909.1;Name=KKZ53909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355787.1;locus_tag=AAX15_06920;product=PAAR repeat-containing protein;protein_id=KKZ53909.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 2737 3402 . + . ID=gene-AAX15_06925;Name=AAX15_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06925 GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 2737 3402 . + 0 ID=cds-KKZ53910.1;Parent=gene-AAX15_06925;Dbxref=NCBI_GP:KKZ53910.1;Name=KKZ53910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017725641.1;locus_tag=AAX15_06925;product=hypothetical protein;protein_id=KKZ53910.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 3371 3691 . + . ID=gene-AAX15_06930;Name=AAX15_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06930 GCA_001008275.1|LCTH01000045.1 GeneMarkS+ CDS 3371 3691 . + 0 ID=cds-KKZ53911.1;Parent=gene-AAX15_06930;Dbxref=NCBI_GP:KKZ53911.1;Name=KKZ53911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_06930;product=hypothetical protein;protein_id=KKZ53911.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 3710 4162 . + . ID=gene-AAX15_06935;Name=AAX15_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06935 GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 3710 4162 . + 0 ID=cds-KKZ53912.1;Parent=gene-AAX15_06935;Dbxref=NCBI_GP:KKZ53912.1;Name=KKZ53912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014754910.1;locus_tag=AAX15_06935;product=hypothetical protein;protein_id=KKZ53912.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 4559 5695 . + . ID=gene-AAX15_06940;Name=AAX15_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06940 GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 4559 5695 . + 0 ID=cds-KKZ53913.1;Parent=gene-AAX15_06940;Dbxref=NCBI_GP:KKZ53913.1;Name=KKZ53913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641051.1;locus_tag=AAX15_06940;product=transposase;protein_id=KKZ53913.1;transl_table=11 GCA_001008275.1|LCTH01000045.1 Genbank gene 6055 6888 . + . ID=gene-AAX15_06945;Name=AAX15_06945;end_range=6888,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06945;partial=true GCA_001008275.1|LCTH01000045.1 Protein Homology CDS 6055 6888 . + 0 ID=cds-KKZ53914.1;Parent=gene-AAX15_06945;Dbxref=NCBI_GP:KKZ53914.1;Name=KKZ53914.1;Note=metalloprotease;end_range=6888,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527380.1;locus_tag=AAX15_06945;partial=true;product=heat shock protein HtpX;protein_id=KKZ53914.1;transl_table=11 ##sequence-region LCTH01000046.1 1 1193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000046.1 Genbank region 1 1193 . + . ID=LCTH01000046.1:1..1193;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000046.1 Genbank gene 1 514 . - . ID=gene-AAX15_06950;Name=AAX15_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06950;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000046.1 GeneMarkS+ CDS 1 514 . - 0 ID=cds-KKZ53892.1;Parent=gene-AAX15_06950;Dbxref=NCBI_GP:KKZ53892.1;Name=KKZ53892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_06950;partial=true;product=hypothetical protein;protein_id=KKZ53892.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000046.1 Genbank gene 716 910 . - . ID=gene-AAX15_06955;Name=AAX15_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06955 GCA_001008275.1|LCTH01000046.1 GeneMarkS+ CDS 716 910 . - 0 ID=cds-KKZ53893.1;Parent=gene-AAX15_06955;Dbxref=NCBI_GP:KKZ53893.1;Name=KKZ53893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_06955;product=hypothetical protein;protein_id=KKZ53893.1;transl_table=11 GCA_001008275.1|LCTH01000046.1 Genbank gene 907 1193 . - . ID=gene-AAX15_06960;Name=AAX15_06960;end_range=1193,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06960;partial=true GCA_001008275.1|LCTH01000046.1 GeneMarkS+ CDS 907 1193 . - 2 ID=cds-KKZ53894.1;Parent=gene-AAX15_06960;Dbxref=NCBI_GP:KKZ53894.1;Name=KKZ53894.1;end_range=1193,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_06960;partial=true;product=hypothetical protein;protein_id=KKZ53894.1;transl_table=11 ##sequence-region LCTH01000047.1 1 8094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000047.1 Genbank region 1 8094 . + . ID=LCTH01000047.1:1..8094;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000047.1 Genbank gene 1 5003 . - . ID=gene-AAX15_06965;Name=AAX15_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06965;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000047.1 Protein Homology CDS 1 5003 . - 0 ID=cds-KKZ53867.1;Parent=gene-AAX15_06965;Dbxref=NCBI_GP:KKZ53867.1;Name=KKZ53867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007836059.1;locus_tag=AAX15_06965;partial=true;product=hypothetical protein;protein_id=KKZ53867.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000047.1 Genbank gene 5283 5840 . - . ID=gene-AAX15_06970;Name=AAX15_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06970 GCA_001008275.1|LCTH01000047.1 GeneMarkS+ CDS 5283 5840 . - 0 ID=cds-KKZ53868.1;Parent=gene-AAX15_06970;Dbxref=NCBI_GP:KKZ53868.1;Name=KKZ53868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_06970;product=hypothetical protein;protein_id=KKZ53868.1;transl_table=11 GCA_001008275.1|LCTH01000047.1 Genbank gene 5837 6175 . - . ID=gene-AAX15_06975;Name=AAX15_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06975 GCA_001008275.1|LCTH01000047.1 Protein Homology CDS 5837 6175 . - 0 ID=cds-KKZ53869.1;Parent=gene-AAX15_06975;Dbxref=NCBI_GP:KKZ53869.1;Name=KKZ53869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001534952.1;locus_tag=AAX15_06975;product=hypothetical protein;protein_id=KKZ53869.1;transl_table=11 GCA_001008275.1|LCTH01000047.1 Genbank gene 6344 6658 . - . ID=gene-AAX15_06980;Name=AAX15_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06980 GCA_001008275.1|LCTH01000047.1 Protein Homology CDS 6344 6658 . - 0 ID=cds-KKZ53870.1;Parent=gene-AAX15_06980;Dbxref=NCBI_GP:KKZ53870.1;Name=KKZ53870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499934.1;locus_tag=AAX15_06980;product=cytochrome C biogenesis protein CcsB;protein_id=KKZ53870.1;transl_table=11 GCA_001008275.1|LCTH01000047.1 Genbank gene 6662 7144 . - . ID=gene-AAX15_06985;Name=AAX15_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06985 GCA_001008275.1|LCTH01000047.1 Protein Homology CDS 6662 7144 . - 0 ID=cds-KKZ53871.1;Parent=gene-AAX15_06985;Dbxref=NCBI_GP:KKZ53871.1;Name=KKZ53871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636777.1;locus_tag=AAX15_06985;product=thioredoxin;protein_id=KKZ53871.1;transl_table=11 GCA_001008275.1|LCTH01000047.1 Genbank gene 7131 7805 . - . ID=gene-AAX15_06990;Name=AAX15_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06990 GCA_001008275.1|LCTH01000047.1 Protein Homology CDS 7131 7805 . - 0 ID=cds-KKZ53872.1;Parent=gene-AAX15_06990;Dbxref=NCBI_GP:KKZ53872.1;Name=KKZ53872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636775.1;locus_tag=AAX15_06990;product=ABC transporter ATP-binding protein;protein_id=KKZ53872.1;transl_table=11 ##sequence-region LCTH01000048.1 1 12988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000048.1 Genbank region 1 12988 . + . ID=LCTH01000048.1:1..12988;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000048.1 Genbank gene 210 1034 . - . ID=gene-AAX15_06995;Name=AAX15_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_06995 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 210 1034 . - 0 ID=cds-KKZ53826.1;Parent=gene-AAX15_06995;Dbxref=NCBI_GP:KKZ53826.1;Name=KKZ53826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550435.1;locus_tag=AAX15_06995;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=KKZ53826.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 1044 1676 . - . ID=gene-AAX15_07000;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=AAX15_07000 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 1044 1676 . - 0 ID=cds-KKZ53827.1;Parent=gene-AAX15_07000;Dbxref=NCBI_GP:KKZ53827.1;Name=KKZ53827.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688767.1;locus_tag=AAX15_07000;product=ADP-ribose pyrophosphatase;protein_id=KKZ53827.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 1872 3191 . - . ID=gene-AAX15_07005;Name=AAX15_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07005 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 1872 3191 . - 0 ID=cds-KKZ53828.1;Parent=gene-AAX15_07005;Dbxref=NCBI_GP:KKZ53828.1;Name=KKZ53828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688769.1;locus_tag=AAX15_07005;product=exodeoxyribonuclease VII large subunit;protein_id=KKZ53828.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 3193 4407 . - . ID=gene-AAX15_07010;Name=AAX15_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07010 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 3193 4407 . - 0 ID=cds-KKZ53829.1;Parent=gene-AAX15_07010;Dbxref=NCBI_GP:KKZ53829.1;Name=KKZ53829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766685.1;locus_tag=AAX15_07010;product=ribosomal oxygenase;protein_id=KKZ53829.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 4410 4718 . - . ID=gene-AAX15_07015;Name=AAX15_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07015 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 4410 4718 . - 0 ID=cds-KKZ53830.1;Parent=gene-AAX15_07015;Dbxref=NCBI_GP:KKZ53830.1;Name=KKZ53830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA93.1;locus_tag=AAX15_07015;product=protein RnfH;protein_id=KKZ53830.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 4896 5480 . + . ID=gene-AAX15_07020;Name=AAX15_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07020 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 4896 5480 . + 0 ID=cds-KKZ53831.1;Parent=gene-AAX15_07020;Dbxref=NCBI_GP:KKZ53831.1;Name=KKZ53831.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNE8.1;locus_tag=AAX15_07020;product=peptidyl-tRNA hydrolase;protein_id=KKZ53831.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 5528 6619 . + . ID=gene-AAX15_07025;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AAX15_07025 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 5528 6619 . + 0 ID=cds-KKZ53832.1;Parent=gene-AAX15_07025;Dbxref=NCBI_GP:KKZ53832.1;Name=KKZ53832.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44681.2;locus_tag=AAX15_07025;product=GTP-binding protein;protein_id=KKZ53832.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 6669 7811 . - . ID=gene-AAX15_07030;Name=AAX15_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07030 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 6669 7811 . - 0 ID=cds-KKZ53833.1;Parent=gene-AAX15_07030;Dbxref=NCBI_GP:KKZ53833.1;Name=KKZ53833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639237.1;locus_tag=AAX15_07030;product=ribonuclease D;protein_id=KKZ53833.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 7867 9555 . - . ID=gene-AAX15_07035;Name=AAX15_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07035 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 7867 9555 . - 0 ID=cds-KKZ53834.1;Parent=gene-AAX15_07035;Dbxref=NCBI_GP:KKZ53834.1;Name=KKZ53834.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652216.1;locus_tag=AAX15_07035;product=long-chain fatty acid--CoA ligase;protein_id=KKZ53834.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 9598 10149 . - . ID=gene-AAX15_07040;Name=AAX15_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07040 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 9598 10149 . - 0 ID=cds-KKZ53835.1;Parent=gene-AAX15_07040;Dbxref=NCBI_GP:KKZ53835.1;Name=KKZ53835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659875.1;locus_tag=AAX15_07040;product=membrane protein;protein_id=KKZ53835.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 10174 10884 . - . ID=gene-AAX15_07045;Name=AAX15_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07045 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 10174 10884 . - 0 ID=cds-KKZ53836.1;Parent=gene-AAX15_07045;Dbxref=NCBI_GP:KKZ53836.1;Name=KKZ53836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641674.1;locus_tag=AAX15_07045;product=hypothetical protein;protein_id=KKZ53836.1;transl_table=11 GCA_001008275.1|LCTH01000048.1 Genbank gene 10897 12819 . - . ID=gene-AAX15_07050;Name=AAX15_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07050 GCA_001008275.1|LCTH01000048.1 Protein Homology CDS 10897 12819 . - 0 ID=cds-KKZ53837.1;Parent=gene-AAX15_07050;Dbxref=NCBI_GP:KKZ53837.1;Name=KKZ53837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766675.1;locus_tag=AAX15_07050;product=ATP-dependent helicase;protein_id=KKZ53837.1;transl_table=11 ##sequence-region LCTH01000049.1 1 42385 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000049.1 Genbank region 1 42385 . + . ID=LCTH01000049.1:1..42385;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000049.1 Genbank gene 364 816 . + . ID=gene-AAX15_07055;Name=AAX15_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07055 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 364 816 . + 0 ID=cds-KKZ53688.1;Parent=gene-AAX15_07055;Dbxref=NCBI_GP:KKZ53688.1;Name=KKZ53688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500159.1;locus_tag=AAX15_07055;product=membrane protein;protein_id=KKZ53688.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 817 1191 . + . ID=gene-AAX15_07060;Name=AAX15_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07060 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 817 1191 . + 0 ID=cds-KKZ53689.1;Parent=gene-AAX15_07060;Dbxref=NCBI_GP:KKZ53689.1;Name=KKZ53689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626360.1;locus_tag=AAX15_07060;product=membrane protein;protein_id=KKZ53689.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 1188 5099 . + . ID=gene-AAX15_07065;Name=AAX15_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07065 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 1188 5099 . + 0 ID=cds-KKZ53690.1;Parent=gene-AAX15_07065;Dbxref=NCBI_GP:KKZ53690.1;Name=KKZ53690.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642708.1;locus_tag=AAX15_07065;product=ATP-dependent helicase HrpA;protein_id=KKZ53690.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 5275 7368 . + . ID=gene-AAX15_07070;Name=AAX15_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07070 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 5275 7368 . + 0 ID=cds-KKZ53691.1;Parent=gene-AAX15_07070;Dbxref=NCBI_GP:KKZ53691.1;Name=KKZ53691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q00042.1;locus_tag=AAX15_07070;product=transposase;protein_id=KKZ53691.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 8110 9636 . + . ID=gene-AAX15_07075;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AAX15_07075 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 8110 9636 . + 0 ID=cds-KKZ53692.1;Parent=gene-AAX15_07075;Dbxref=NCBI_GP:KKZ53692.1;Name=KKZ53692.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631014.1;locus_tag=AAX15_07075;product=cytochrome C nitrite reductase;protein_id=KKZ53692.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 9713 10363 . + . ID=gene-AAX15_07080;Name=AAX15_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07080 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 9713 10363 . + 0 ID=cds-KKZ53693.1;Parent=gene-AAX15_07080;Dbxref=NCBI_GP:KKZ53693.1;Name=KKZ53693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642714.1;locus_tag=AAX15_07080;product=cysteine dioxygenase;protein_id=KKZ53693.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 10360 11037 . + . ID=gene-AAX15_07085;Name=AAX15_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07085 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 10360 11037 . + 0 ID=cds-KKZ53694.1;Parent=gene-AAX15_07085;Dbxref=NCBI_GP:KKZ53694.1;Name=KKZ53694.1;Note=4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996588.1;locus_tag=AAX15_07085;product=nitrite reductase;protein_id=KKZ53694.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 11034 11999 . + . ID=gene-AAX15_07090;Name=AAX15_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07090 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 11034 11999 . + 0 ID=cds-KKZ53695.1;Parent=gene-AAX15_07090;Dbxref=NCBI_GP:KKZ53695.1;Name=KKZ53695.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631010.1;locus_tag=AAX15_07090;product=nitrite reductase;protein_id=KKZ53695.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Protein Homology pseudogene 12100 12509 . + . ID=gene-AAX15_07095;Name=AAX15_07095;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_07095;pseudo=true GCA_001008275.1|LCTH01000049.1 Genbank gene 12774 13598 . + . ID=gene-AAX15_07100;Name=AAX15_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07100 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 12774 13598 . + 0 ID=cds-KKZ53696.1;Parent=gene-AAX15_07100;Dbxref=NCBI_GP:KKZ53696.1;Name=KKZ53696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636367.1;locus_tag=AAX15_07100;product=glutamine amidotransferase;protein_id=KKZ53696.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 13655 14428 . - . ID=gene-AAX15_07105;Name=AAX15_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07105 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 13655 14428 . - 0 ID=cds-KKZ53697.1;Parent=gene-AAX15_07105;Dbxref=NCBI_GP:KKZ53697.1;Name=KKZ53697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632904.1;locus_tag=AAX15_07105;product=energy transducer TonB;protein_id=KKZ53697.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 14438 14881 . - . ID=gene-AAX15_07110;Name=AAX15_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07110 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 14438 14881 . - 0 ID=cds-KKZ53698.1;Parent=gene-AAX15_07110;Dbxref=NCBI_GP:KKZ53698.1;Name=KKZ53698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656183.1;locus_tag=AAX15_07110;product=biopolymer transporter ExbD;protein_id=KKZ53698.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 14885 15337 . - . ID=gene-AAX15_07115;Name=AAX15_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07115 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 14885 15337 . - 0 ID=cds-KKZ53699.1;Parent=gene-AAX15_07115;Dbxref=NCBI_GP:KKZ53699.1;Name=KKZ53699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627854.1;locus_tag=AAX15_07115;product=energy transducer TonB;protein_id=KKZ53699.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 15504 15971 . - . ID=gene-AAX15_07120;Name=AAX15_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07120 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 15504 15971 . - 0 ID=cds-KKZ53700.1;Parent=gene-AAX15_07120;Dbxref=NCBI_GP:KKZ53700.1;Name=KKZ53700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500839.1;locus_tag=AAX15_07120;product=bacterioferritin comigratory protein;protein_id=KKZ53700.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 16073 16969 . + . ID=gene-AAX15_07125;Name=AAX15_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07125 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 16073 16969 . + 0 ID=cds-KKZ53701.1;Parent=gene-AAX15_07125;Dbxref=NCBI_GP:KKZ53701.1;Name=KKZ53701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636374.1;locus_tag=AAX15_07125;product=dihydrodipicolinate synthase;protein_id=KKZ53701.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 17068 18072 . + . ID=gene-AAX15_07130;Name=AAX15_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07130 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 17068 18072 . + 0 ID=cds-KKZ53702.1;Parent=gene-AAX15_07130;Dbxref=NCBI_GP:KKZ53702.1;Name=KKZ53702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635063.1;locus_tag=AAX15_07130;product=outer membrane protein assembly protein BamC;protein_id=KKZ53702.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 18104 19147 . - . ID=gene-AAX15_07135;Name=AAX15_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07135 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 18104 19147 . - 0 ID=cds-KKZ53703.1;Parent=gene-AAX15_07135;Dbxref=NCBI_GP:KKZ53703.1;Name=KKZ53703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635064.1;locus_tag=AAX15_07135;product=glycosyl transferase;protein_id=KKZ53703.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 19224 19949 . + . ID=gene-AAX15_07140;Name=AAX15_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07140 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 19224 19949 . + 0 ID=cds-KKZ53721.1;Parent=gene-AAX15_07140;Dbxref=NCBI_GP:KKZ53721.1;Name=KKZ53721.1;Note=catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668866.1;locus_tag=AAX15_07140;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=KKZ53721.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 19961 20548 . + . ID=gene-AAX15_07145;Name=AAX15_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07145 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 19961 20548 . + 0 ID=cds-KKZ53704.1;Parent=gene-AAX15_07145;Dbxref=NCBI_GP:KKZ53704.1;Name=KKZ53704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635067.1;locus_tag=AAX15_07145;product=nucleoside-triphosphate diphosphatase;protein_id=KKZ53704.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 20639 22483 . - . ID=gene-AAX15_07150;Name=AAX15_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07150 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 20639 22483 . - 0 ID=cds-KKZ53705.1;Parent=gene-AAX15_07150;Dbxref=NCBI_GP:KKZ53705.1;Name=KKZ53705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57180.1;locus_tag=AAX15_07150;product=multidrug ABC transporter ATP-binding protein;protein_id=KKZ53705.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Protein Homology pseudogene 22562 23457 . - . ID=gene-AAX15_07155;Name=AAX15_07155;Note=disrupted;description=AraC family transcriptional regulator;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_07155;pseudo=true GCA_001008275.1|LCTH01000049.1 Genbank gene 23569 23910 . + . ID=gene-AAX15_07160;Name=AAX15_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07160 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 23569 23910 . + 0 ID=cds-KKZ53706.1;Parent=gene-AAX15_07160;Dbxref=NCBI_GP:KKZ53706.1;Name=KKZ53706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627672.1;locus_tag=AAX15_07160;product=hypothetical protein;protein_id=KKZ53706.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 24029 24622 . - . ID=gene-AAX15_07165;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AAX15_07165 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 24029 24622 . - 0 ID=cds-KKZ53707.1;Parent=gene-AAX15_07165;Dbxref=NCBI_GP:KKZ53707.1;Name=KKZ53707.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500847.1;locus_tag=AAX15_07165;product=ribonuclease HII;protein_id=KKZ53707.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 24615 25787 . - . ID=gene-AAX15_07170;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AAX15_07170 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 24615 25787 . - 0 ID=cds-KKZ53708.1;Parent=gene-AAX15_07170;Dbxref=NCBI_GP:KKZ53708.1;Name=KKZ53708.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLM6.1;locus_tag=AAX15_07170;product=lipid-A-disaccharide synthase;protein_id=KKZ53708.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 25854 26642 . - . ID=gene-AAX15_07175;Name=AAX15_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07175 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 25854 26642 . - 0 ID=cds-KKZ53709.1;Parent=gene-AAX15_07175;Dbxref=NCBI_GP:KKZ53709.1;Name=KKZ53709.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669829.1;locus_tag=AAX15_07175;product=UDP-N-acetylglucosamine acyltransferase;protein_id=KKZ53709.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 26657 27061 . - . ID=gene-AAX15_07180;Name=AAX15_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07180 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 26657 27061 . - 0 ID=cds-KKZ53722.1;Parent=gene-AAX15_07180;Dbxref=NCBI_GP:KKZ53722.1;Name=KKZ53722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005685437.1;locus_tag=AAX15_07180;product=3-hydroxyacyl-ACP dehydratase;protein_id=KKZ53722.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 27189 28748 . - . ID=gene-AAX15_07185;Name=AAX15_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07185 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 27189 28748 . - 0 ID=cds-KKZ53710.1;Parent=gene-AAX15_07185;Dbxref=NCBI_GP:KKZ53710.1;Name=KKZ53710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702043.1;locus_tag=AAX15_07185;product=membrane protein;protein_id=KKZ53710.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 28879 29592 . + . ID=gene-AAX15_07190;Name=AAX15_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07190 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 28879 29592 . + 0 ID=cds-KKZ53711.1;Parent=gene-AAX15_07190;Dbxref=NCBI_GP:KKZ53711.1;Name=KKZ53711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690774.1;locus_tag=AAX15_07190;product=uridylate kinase;protein_id=KKZ53711.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 29657 31183 . - . ID=gene-AAX15_07195;Name=AAX15_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07195 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 29657 31183 . - 0 ID=cds-KKZ53712.1;Parent=gene-AAX15_07195;Dbxref=NCBI_GP:KKZ53712.1;Name=KKZ53712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995588.1;locus_tag=AAX15_07195;product=catalase;protein_id=KKZ53712.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 31921 32133 . + . ID=gene-AAX15_07200;Name=AAX15_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07200 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 31921 32133 . + 0 ID=cds-KKZ53713.1;Parent=gene-AAX15_07200;Dbxref=NCBI_GP:KKZ53713.1;Name=KKZ53713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010129411.1;locus_tag=AAX15_07200;product=hypothetical protein;protein_id=KKZ53713.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 32126 32404 . + . ID=gene-AAX15_07205;Name=AAX15_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07205 GCA_001008275.1|LCTH01000049.1 GeneMarkS+ CDS 32126 32404 . + 0 ID=cds-KKZ53714.1;Parent=gene-AAX15_07205;Dbxref=NCBI_GP:KKZ53714.1;Name=KKZ53714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_07205;product=hypothetical protein;protein_id=KKZ53714.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 32445 34163 . + . ID=gene-AAX15_07210;Name=AAX15_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07210 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 32445 34163 . + 0 ID=cds-KKZ53715.1;Parent=gene-AAX15_07210;Dbxref=NCBI_GP:KKZ53715.1;Name=KKZ53715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644504.1;locus_tag=AAX15_07210;product=hypothetical protein;protein_id=KKZ53715.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 34206 34616 . - . ID=gene-AAX15_07215;Name=AAX15_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07215 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 34206 34616 . - 0 ID=cds-KKZ53723.1;Parent=gene-AAX15_07215;Dbxref=NCBI_GP:KKZ53723.1;Name=KKZ53723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526598.1;locus_tag=AAX15_07215;product=hypothetical protein;protein_id=KKZ53723.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 35023 35415 . + . ID=gene-AAX15_07220;Name=AAX15_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07220 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 35023 35415 . + 0 ID=cds-KKZ53716.1;Parent=gene-AAX15_07220;Dbxref=NCBI_GP:KKZ53716.1;Name=KKZ53716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020220203.1;locus_tag=AAX15_07220;product=MerR family transcriptional regulator;protein_id=KKZ53716.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 35444 37084 . + . ID=gene-AAX15_07225;Name=AAX15_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07225 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 35444 37084 . + 0 ID=cds-KKZ53717.1;Parent=gene-AAX15_07225;Dbxref=NCBI_GP:KKZ53717.1;Name=KKZ53717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001031939.1;locus_tag=AAX15_07225;product=mercuric reductase;protein_id=KKZ53717.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Protein Homology pseudogene 37313 38218 . + . ID=gene-AAX15_07230;Name=AAX15_07230;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_07230;pseudo=true GCA_001008275.1|LCTH01000049.1 Genbank gene 38265 38525 . + . ID=gene-AAX15_07235;Name=AAX15_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07235 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 38265 38525 . + 0 ID=cds-KKZ53718.1;Parent=gene-AAX15_07235;Dbxref=NCBI_GP:KKZ53718.1;Name=KKZ53718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644566.1;locus_tag=AAX15_07235;product=DNA-binding protein;protein_id=KKZ53718.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 39047 40246 . - . ID=gene-AAX15_07240;Name=AAX15_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07240 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 39047 40246 . - 0 ID=cds-KKZ53719.1;Parent=gene-AAX15_07240;Dbxref=NCBI_GP:KKZ53719.1;Name=KKZ53719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644386.1;locus_tag=AAX15_07240;product=preprotein translocase;protein_id=KKZ53719.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 40485 40560 . - . ID=gene-AAX15_07245;Name=AAX15_07245;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07245 GCA_001008275.1|LCTH01000049.1 tRNAscan-SE tRNA 40485 40560 . - . ID=rna-AAX15_07245;Parent=gene-AAX15_07245;anticodon=(pos:complement(40525..40527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07245;product=tRNA-Ala GCA_001008275.1|LCTH01000049.1 tRNAscan-SE exon 40485 40560 . - . ID=exon-AAX15_07245-1;Parent=rna-AAX15_07245;anticodon=(pos:complement(40525..40527));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07245;product=tRNA-Ala GCA_001008275.1|LCTH01000049.1 Genbank gene 40641 42083 . - . ID=gene-AAX15_07250;Name=AAX15_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07250 GCA_001008275.1|LCTH01000049.1 Protein Homology CDS 40641 42083 . - 0 ID=cds-KKZ53720.1;Parent=gene-AAX15_07250;Dbxref=NCBI_GP:KKZ53720.1;Name=KKZ53720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632875.1;locus_tag=AAX15_07250;product=glutamyl-tRNA synthetase;protein_id=KKZ53720.1;transl_table=11 GCA_001008275.1|LCTH01000049.1 Genbank gene 42254 42329 . + . ID=gene-AAX15_07255;Name=AAX15_07255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07255 GCA_001008275.1|LCTH01000049.1 tRNAscan-SE tRNA 42254 42329 . + . ID=rna-AAX15_07255;Parent=gene-AAX15_07255;anticodon=(pos:42287..42289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07255;product=tRNA-Val GCA_001008275.1|LCTH01000049.1 tRNAscan-SE exon 42254 42329 . + . ID=exon-AAX15_07255-1;Parent=rna-AAX15_07255;anticodon=(pos:42287..42289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07255;product=tRNA-Val ##sequence-region LCTH01000050.1 1 1179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000050.1 Genbank region 1 1179 . + . ID=LCTH01000050.1:1..1179;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000050.1 Genbank gene 58 567 . + . ID=gene-AAX15_07260;Name=AAX15_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07260 GCA_001008275.1|LCTH01000050.1 Protein Homology CDS 58 567 . + 0 ID=cds-KKZ53616.1;Parent=gene-AAX15_07260;Dbxref=NCBI_GP:KKZ53616.1;Name=KKZ53616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638656.1;locus_tag=AAX15_07260;product=hypothetical protein;protein_id=KKZ53616.1;transl_table=11 GCA_001008275.1|LCTH01000050.1 Genbank gene 579 1179 . + . ID=gene-AAX15_07265;Name=AAX15_07265;end_range=1179,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07265;partial=true GCA_001008275.1|LCTH01000050.1 Protein Homology CDS 579 1179 . + 0 ID=cds-KKZ53617.1;Parent=gene-AAX15_07265;Dbxref=NCBI_GP:KKZ53617.1;Name=KKZ53617.1;end_range=1179,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527654.1;locus_tag=AAX15_07265;partial=true;product=integrase;protein_id=KKZ53617.1;transl_table=11 ##sequence-region LCTH01000051.1 1 12588 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000051.1 Genbank region 1 12588 . + . ID=LCTH01000051.1:1..12588;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000051.1 Genbank gene 1 354 . + . ID=gene-AAX15_07270;Name=AAX15_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07270;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 1 354 . + 0 ID=cds-KKZ53571.1;Parent=gene-AAX15_07270;Dbxref=NCBI_GP:KKZ53571.1;Name=KKZ53571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692054.1;locus_tag=AAX15_07270;partial=true;product=ribosomal RNA small subunit methyltransferase A;protein_id=KKZ53571.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 369 1196 . + . ID=gene-AAX15_07275;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AAX15_07275 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 369 1196 . + 0 ID=cds-KKZ53572.1;Parent=gene-AAX15_07275;Dbxref=NCBI_GP:KKZ53572.1;Name=KKZ53572.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639409.1;locus_tag=AAX15_07275;product=diadenosine tetraphosphatase;protein_id=KKZ53572.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 1206 1829 . + . ID=gene-AAX15_07280;Name=AAX15_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07280 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 1206 1829 . + 0 ID=cds-KKZ53573.1;Parent=gene-AAX15_07280;Dbxref=NCBI_GP:KKZ53573.1;Name=KKZ53573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633014.1;locus_tag=AAX15_07280;product=hypothetical protein;protein_id=KKZ53573.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 1932 3266 . + . ID=gene-AAX15_07285;Name=AAX15_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07285 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 1932 3266 . + 0 ID=cds-KKZ53574.1;Parent=gene-AAX15_07285;Dbxref=NCBI_GP:KKZ53574.1;Name=KKZ53574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44856.1;locus_tag=AAX15_07285;product=NADH dehydrogenase;protein_id=KKZ53574.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 3307 4254 . - . ID=gene-AAX15_07290;Name=AAX15_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07290 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 3307 4254 . - 0 ID=cds-KKZ53575.1;Parent=gene-AAX15_07290;Dbxref=NCBI_GP:KKZ53575.1;Name=KKZ53575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500402.1;locus_tag=AAX15_07290;product=sigma-E factor regulatory protein RseB;protein_id=KKZ53575.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 4342 4929 . - . ID=gene-AAX15_07295;Name=AAX15_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07295 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 4342 4929 . - 0 ID=cds-KKZ53576.1;Parent=gene-AAX15_07295;Dbxref=NCBI_GP:KKZ53576.1;Name=KKZ53576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500401.1;locus_tag=AAX15_07295;product=sigma-E factor negative regulatory protein;protein_id=KKZ53576.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 4947 5525 . - . ID=gene-AAX15_07300;Name=AAX15_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07300 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 4947 5525 . - 0 ID=cds-KKZ53577.1;Parent=gene-AAX15_07300;Dbxref=NCBI_GP:KKZ53577.1;Name=KKZ53577.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636967.1;locus_tag=AAX15_07300;product=RNA polymerase sigma factor RpoE;protein_id=KKZ53577.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 5634 5891 . - . ID=gene-AAX15_07305;Name=AAX15_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07305 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 5634 5891 . - 0 ID=cds-KKZ53584.1;Parent=gene-AAX15_07305;Dbxref=NCBI_GP:KKZ53584.1;Name=KKZ53584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMW1.1;locus_tag=AAX15_07305;product=hypothetical protein;protein_id=KKZ53584.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 5986 6372 . - . ID=gene-AAX15_07310;Name=AAX15_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07310 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 5986 6372 . - 0 ID=cds-KKZ53578.1;Parent=gene-AAX15_07310;Dbxref=NCBI_GP:KKZ53578.1;Name=KKZ53578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692969.1;locus_tag=AAX15_07310;product=Large-conductance mechanosensitive channel;protein_id=KKZ53578.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 6445 7821 . - . ID=gene-AAX15_07315;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=AAX15_07315 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 6445 7821 . - 0 ID=cds-KKZ53579.1;Parent=gene-AAX15_07315;Dbxref=NCBI_GP:KKZ53579.1;Name=KKZ53579.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:SwissProt:P71354.1;locus_tag=AAX15_07315;product=potassium transporter peripheral membrane component;protein_id=KKZ53579.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 7825 8628 . - . ID=gene-AAX15_07320;Name=AAX15_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07320 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 7825 8628 . - 0 ID=cds-KKZ53585.1;Parent=gene-AAX15_07320;Dbxref=NCBI_GP:KKZ53585.1;Name=KKZ53585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627588.1;locus_tag=AAX15_07320;product=glycosyltransferase;protein_id=KKZ53585.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 8637 9989 . - . ID=gene-AAX15_07325;Name=AAX15_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07325 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 8637 9989 . - 0 ID=cds-KKZ53580.1;Parent=gene-AAX15_07325;Dbxref=NCBI_GP:KKZ53580.1;Name=KKZ53580.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500397.1;locus_tag=AAX15_07325;product=16S rRNA methyltransferase;protein_id=KKZ53580.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 9989 10945 . - . ID=gene-AAX15_07330;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AAX15_07330 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 9989 10945 . - 0 ID=cds-KKZ53581.1;Parent=gene-AAX15_07330;Dbxref=NCBI_GP:KKZ53581.1;Name=KKZ53581.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658672.1;locus_tag=AAX15_07330;product=methionyl-tRNA formyltransferase;protein_id=KKZ53581.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 11021 11530 . - . ID=gene-AAX15_07335;Name=AAX15_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07335 GCA_001008275.1|LCTH01000051.1 Protein Homology CDS 11021 11530 . - 0 ID=cds-KKZ53582.1;Parent=gene-AAX15_07335;Dbxref=NCBI_GP:KKZ53582.1;Name=KKZ53582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658670.1;locus_tag=AAX15_07335;product=peptide deformylase;protein_id=KKZ53582.1;transl_table=11 GCA_001008275.1|LCTH01000051.1 Genbank gene 11848 12354 . - . ID=gene-AAX15_07340;Name=AAX15_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07340 GCA_001008275.1|LCTH01000051.1 GeneMarkS+ CDS 11848 12354 . - 0 ID=cds-KKZ53583.1;Parent=gene-AAX15_07340;Dbxref=NCBI_GP:KKZ53583.1;Name=KKZ53583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_07340;product=hypothetical protein;protein_id=KKZ53583.1;transl_table=11 ##sequence-region LCTH01000052.1 1 23048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000052.1 Genbank region 1 23048 . + . ID=LCTH01000052.1:1..23048;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000052.1 Genbank gene 119 547 . - . ID=gene-AAX15_07345;Name=AAX15_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07345 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 119 547 . - 0 ID=cds-KKZ53523.1;Parent=gene-AAX15_07345;Dbxref=NCBI_GP:KKZ53523.1;Name=KKZ53523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005763439.1;locus_tag=AAX15_07345;product=50S ribosomal protein L11;protein_id=KKZ53523.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 720 1436 . - . ID=gene-AAX15_07350;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AAX15_07350 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 720 1436 . - 0 ID=cds-KKZ53524.1;Parent=gene-AAX15_07350;Dbxref=NCBI_GP:KKZ53524.1;Name=KKZ53524.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630842.1;locus_tag=AAX15_07350;product=purine nucleoside phosphorylase;protein_id=KKZ53524.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 1506 2759 . - . ID=gene-AAX15_07355;Name=AAX15_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07355 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 1506 2759 . - 0 ID=cds-KKZ53525.1;Parent=gene-AAX15_07355;Dbxref=NCBI_GP:KKZ53525.1;Name=KKZ53525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44742.1;locus_tag=AAX15_07355;product=nucleoside transporter NupC;protein_id=KKZ53525.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 2861 3649 . - . ID=gene-AAX15_07360;Name=AAX15_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07360 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 2861 3649 . - 0 ID=cds-KKZ53526.1;Parent=gene-AAX15_07360;Dbxref=NCBI_GP:KKZ53526.1;Name=KKZ53526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639374.1;locus_tag=AAX15_07360;product=hypothetical protein;protein_id=KKZ53526.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 3658 5202 . - . ID=gene-AAX15_07365;Name=AAX15_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07365 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 3658 5202 . - 0 ID=cds-KKZ53527.1;Parent=gene-AAX15_07365;Dbxref=NCBI_GP:KKZ53527.1;Name=KKZ53527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643931.1;locus_tag=AAX15_07365;product=hypothetical protein;protein_id=KKZ53527.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 5414 6454 . - . ID=gene-AAX15_07370;Name=AAX15_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07370 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 5414 6454 . - 0 ID=cds-KKZ53528.1;Parent=gene-AAX15_07370;Dbxref=NCBI_GP:KKZ53528.1;Name=KKZ53528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633043.1;locus_tag=AAX15_07370;product=hypothetical protein;protein_id=KKZ53528.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 6691 7968 . - . ID=gene-AAX15_07375;Name=AAX15_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07375 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 6691 7968 . - 0 ID=cds-KKZ53547.1;Parent=gene-AAX15_07375;Dbxref=NCBI_GP:KKZ53547.1;Name=KKZ53547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645778.1;locus_tag=AAX15_07375;product=hypothetical protein;protein_id=KKZ53547.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 8101 8715 . - . ID=gene-AAX15_07380;Name=AAX15_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07380 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 8101 8715 . - 0 ID=cds-KKZ53529.1;Parent=gene-AAX15_07380;Dbxref=NCBI_GP:KKZ53529.1;Name=KKZ53529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758845.1;locus_tag=AAX15_07380;product=hypothetical protein;protein_id=KKZ53529.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 8853 9230 . + . ID=gene-AAX15_07385;Name=AAX15_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07385 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 8853 9230 . + 0 ID=cds-KKZ53530.1;Parent=gene-AAX15_07385;Dbxref=NCBI_GP:KKZ53530.1;Name=KKZ53530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005822432.1;locus_tag=AAX15_07385;product=hypothetical protein;protein_id=KKZ53530.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 9550 10629 . - . ID=gene-AAX15_07390;Name=AAX15_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07390 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 9550 10629 . - 0 ID=cds-KKZ53531.1;Parent=gene-AAX15_07390;Dbxref=NCBI_GP:KKZ53531.1;Name=KKZ53531.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702948.1;locus_tag=AAX15_07390;product=fructose-bisphosphate aldolase;protein_id=KKZ53531.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 10750 11910 . - . ID=gene-AAX15_07395;Name=AAX15_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07395 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 10750 11910 . - 0 ID=cds-KKZ53532.1;Parent=gene-AAX15_07395;Dbxref=NCBI_GP:KKZ53532.1;Name=KKZ53532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658010.1;locus_tag=AAX15_07395;product=phosphoglycerate kinase;protein_id=KKZ53532.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 12006 12788 . - . ID=gene-AAX15_07400;Name=AAX15_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07400 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 12006 12788 . - 0 ID=cds-KKZ53533.1;Parent=gene-AAX15_07400;Dbxref=NCBI_GP:KKZ53533.1;Name=KKZ53533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630853.1;locus_tag=AAX15_07400;product=ribonuclease HI;protein_id=KKZ53533.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 12866 13126 . + . ID=gene-AAX15_07405;Name=AAX15_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07405 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 12866 13126 . + 0 ID=cds-KKZ53534.1;Parent=gene-AAX15_07405;Dbxref=NCBI_GP:KKZ53534.1;Name=KKZ53534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064693.1;locus_tag=AAX15_07405;product=ferredoxin;protein_id=KKZ53534.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 13224 14444 . - . ID=gene-AAX15_07410;Name=AAX15_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07410 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 13224 14444 . - 0 ID=cds-KKZ53535.1;Parent=gene-AAX15_07410;Dbxref=NCBI_GP:KKZ53535.1;Name=KKZ53535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500424.1;locus_tag=AAX15_07410;product=tyrosine transporter;protein_id=KKZ53535.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 14481 15062 . - . ID=gene-AAX15_07415;Name=AAX15_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07415 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 14481 15062 . - 0 ID=cds-KKZ53536.1;Parent=gene-AAX15_07415;Dbxref=NCBI_GP:KKZ53536.1;Name=KKZ53536.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526416.1;locus_tag=AAX15_07415;product=thymidine kinase;protein_id=KKZ53536.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 15071 16099 . - . ID=gene-AAX15_07420;Name=AAX15_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07420 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 15071 16099 . - 0 ID=cds-KKZ53537.1;Parent=gene-AAX15_07420;Dbxref=NCBI_GP:KKZ53537.1;Name=KKZ53537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43764.1;locus_tag=AAX15_07420;product=tRNA threonylcarbamoyladenosine biosynthesis protein Gcp;protein_id=KKZ53537.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 16331 16546 . + . ID=gene-AAX15_07425;Name=AAX15_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07425 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 16331 16546 . + 0 ID=cds-KKZ53538.1;Parent=gene-AAX15_07425;Dbxref=NCBI_GP:KKZ53538.1;Name=KKZ53538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VM96.1;locus_tag=AAX15_07425;product=30S ribosomal protein S21;protein_id=KKZ53538.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 16680 18461 . + . ID=gene-AAX15_07430;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AAX15_07430 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 16680 18461 . + 0 ID=cds-KKZ53539.1;Parent=gene-AAX15_07430;Dbxref=NCBI_GP:KKZ53539.1;Name=KKZ53539.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643943.1;locus_tag=AAX15_07430;product=DNA primase;protein_id=KKZ53539.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 18533 20416 . + . ID=gene-AAX15_07435;Name=AAX15_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07435 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 18533 20416 . + 0 ID=cds-KKZ53540.1;Parent=gene-AAX15_07435;Dbxref=NCBI_GP:KKZ53540.1;Name=KKZ53540.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630859.1;locus_tag=AAX15_07435;product=RNA polymerase sigma factor RpoD;protein_id=KKZ53540.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 20519 20968 . - . ID=gene-AAX15_07440;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AAX15_07440 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 20519 20968 . - 0 ID=cds-KKZ53541.1;Parent=gene-AAX15_07440;Dbxref=NCBI_GP:KKZ53541.1;Name=KKZ53541.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064775.1;locus_tag=AAX15_07440;product=50S ribosomal protein L9;protein_id=KKZ53541.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 20985 21212 . - . ID=gene-AAX15_07445;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AAX15_07445 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 20985 21212 . - 0 ID=cds-KKZ53542.1;Parent=gene-AAX15_07445;Dbxref=NCBI_GP:KKZ53542.1;Name=KKZ53542.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005705387.1;locus_tag=AAX15_07445;product=30S ribosomal protein S18;protein_id=KKZ53542.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 21225 21551 . - . ID=gene-AAX15_07450;Name=AAX15_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07450 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 21225 21551 . - 0 ID=cds-KKZ53543.1;Parent=gene-AAX15_07450;Dbxref=NCBI_GP:KKZ53543.1;Name=KKZ53543.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995205.1;locus_tag=AAX15_07450;product=primosomal replication protein N;protein_id=KKZ53543.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 21538 21915 . - . ID=gene-AAX15_07455;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AAX15_07455 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 21538 21915 . - 0 ID=cds-KKZ53544.1;Parent=gene-AAX15_07455;Dbxref=NCBI_GP:KKZ53544.1;Name=KKZ53544.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500411.1;locus_tag=AAX15_07455;product=30S ribosomal protein S6;protein_id=KKZ53544.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 22114 22332 . - . ID=gene-AAX15_07460;Name=AAX15_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07460 GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 22114 22332 . - 0 ID=cds-KKZ53545.1;Parent=gene-AAX15_07460;Dbxref=NCBI_GP:KKZ53545.1;Name=KKZ53545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016955625.1;locus_tag=AAX15_07460;product=translation initiation factor IF-1;protein_id=KKZ53545.1;transl_table=11 GCA_001008275.1|LCTH01000052.1 Genbank gene 22539 23048 . + . ID=gene-AAX15_07465;Name=AAX15_07465;end_range=23048,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07465;partial=true GCA_001008275.1|LCTH01000052.1 Protein Homology CDS 22539 23048 . + 0 ID=cds-KKZ53546.1;Parent=gene-AAX15_07465;Dbxref=NCBI_GP:KKZ53546.1;Name=KKZ53546.1;end_range=23048,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636665.1;locus_tag=AAX15_07465;partial=true;product=ribosomal RNA small subunit methyltransferase A;protein_id=KKZ53546.1;transl_table=11 ##sequence-region LCTH01000053.1 1 18365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000053.1 Genbank region 1 18365 . + . ID=LCTH01000053.1:1..18365;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000053.1 Genbank gene 45 160 . + . ID=gene-AAX15_07470;Name=AAX15_07470;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_07470 GCA_001008275.1|LCTH01000053.1 cmsearch rRNA 45 160 . + . ID=rna-AAX15_07470;Parent=gene-AAX15_07470;gbkey=rRNA;locus_tag=AAX15_07470;product=5S ribosomal RNA GCA_001008275.1|LCTH01000053.1 cmsearch exon 45 160 . + . ID=exon-AAX15_07470-1;Parent=rna-AAX15_07470;gbkey=rRNA;locus_tag=AAX15_07470;product=5S ribosomal RNA GCA_001008275.1|LCTH01000053.1 Genbank gene 173 249 . + . ID=gene-AAX15_07475;Name=AAX15_07475;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07475 GCA_001008275.1|LCTH01000053.1 tRNAscan-SE tRNA 173 249 . + . ID=rna-AAX15_07475;Parent=gene-AAX15_07475;anticodon=(pos:207..209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07475;product=tRNA-Asp GCA_001008275.1|LCTH01000053.1 tRNAscan-SE exon 173 249 . + . ID=exon-AAX15_07475-1;Parent=rna-AAX15_07475;anticodon=(pos:207..209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07475;product=tRNA-Asp GCA_001008275.1|LCTH01000053.1 Genbank gene 266 341 . + . ID=gene-AAX15_07480;Name=AAX15_07480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07480 GCA_001008275.1|LCTH01000053.1 tRNAscan-SE tRNA 266 341 . + . ID=rna-AAX15_07480;Parent=gene-AAX15_07480;anticodon=(pos:299..301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07480;product=tRNA-Trp GCA_001008275.1|LCTH01000053.1 tRNAscan-SE exon 266 341 . + . ID=exon-AAX15_07480-1;Parent=rna-AAX15_07480;anticodon=(pos:299..301);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07480;product=tRNA-Trp GCA_001008275.1|LCTH01000053.1 Genbank gene 476 1615 . + . ID=gene-AAX15_07485;Name=AAX15_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07485 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 476 1615 . + 0 ID=cds-KKZ53462.1;Parent=gene-AAX15_07485;Dbxref=NCBI_GP:KKZ53462.1;Name=KKZ53462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639097.1;locus_tag=AAX15_07485;product=anhydro-N-acetylmuramic acid kinase;protein_id=KKZ53462.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 1625 2536 . + . ID=gene-AAX15_07490;Name=AAX15_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07490 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 1625 2536 . + 0 ID=cds-KKZ53463.1;Parent=gene-AAX15_07490;Dbxref=NCBI_GP:KKZ53463.1;Name=KKZ53463.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639099.1;locus_tag=AAX15_07490;product=N-acetylmuramic acid-6-phosphate etherase;protein_id=KKZ53463.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 2566 3408 . - . ID=gene-AAX15_07495;Name=AAX15_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07495 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 2566 3408 . - 0 ID=cds-KKZ53464.1;Parent=gene-AAX15_07495;Dbxref=NCBI_GP:KKZ53464.1;Name=KKZ53464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646800.1;locus_tag=AAX15_07495;product=hypothetical protein;protein_id=KKZ53464.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 3408 4640 . - . ID=gene-AAX15_07500;Name=AAX15_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07500 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 3408 4640 . - 0 ID=cds-KKZ53465.1;Parent=gene-AAX15_07500;Dbxref=NCBI_GP:KKZ53465.1;Name=KKZ53465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500240.1;locus_tag=AAX15_07500;product=hypothetical protein;protein_id=KKZ53465.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 4816 5499 . + . ID=gene-AAX15_07505;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AAX15_07505 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 4816 5499 . + 0 ID=cds-KKZ53466.1;Parent=gene-AAX15_07505;Dbxref=NCBI_GP:KKZ53466.1;Name=KKZ53466.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356893.1;locus_tag=AAX15_07505;product=phosphoglyceromutase;protein_id=KKZ53466.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 5968 6711 . - . ID=gene-AAX15_07510;Name=AAX15_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07510 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 5968 6711 . - 0 ID=cds-KKZ53476.1;Parent=gene-AAX15_07510;Dbxref=NCBI_GP:KKZ53476.1;Name=KKZ53476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356350.1;locus_tag=AAX15_07510;product=UDP-glucose--lipooligosaccharide glucosyltransferase;protein_id=KKZ53476.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 6713 7879 . - . ID=gene-AAX15_07515;Name=AAX15_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07515 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 6713 7879 . - 0 ID=cds-KKZ53477.1;Parent=gene-AAX15_07515;Dbxref=NCBI_GP:KKZ53477.1;Name=KKZ53477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018498396.1;locus_tag=AAX15_07515;product=hypothetical protein;protein_id=KKZ53477.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 7895 8782 . - . ID=gene-AAX15_07520;Name=AAX15_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07520 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 7895 8782 . - 0 ID=cds-KKZ53467.1;Parent=gene-AAX15_07520;Dbxref=NCBI_GP:KKZ53467.1;Name=KKZ53467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356348.1;locus_tag=AAX15_07520;product=hypothetical protein;protein_id=KKZ53467.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 8873 9085 . - . ID=gene-AAX15_07525;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AAX15_07525 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 8873 9085 . - 0 ID=cds-KKZ53468.1;Parent=gene-AAX15_07525;Dbxref=NCBI_GP:KKZ53468.1;Name=KKZ53468.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;inference=EXISTENCE: similar to AA sequence:SwissProt:P44367.1;locus_tag=AAX15_07525;product=50S ribosomal protein L31;protein_id=KKZ53468.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 9260 10396 . + . ID=gene-AAX15_07530;Name=AAX15_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07530 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 9260 10396 . + 0 ID=cds-KKZ53469.1;Parent=gene-AAX15_07530;Dbxref=NCBI_GP:KKZ53469.1;Name=KKZ53469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639105.1;locus_tag=AAX15_07530;product=adenine glycosylase;protein_id=KKZ53469.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 10374 10646 . + . ID=gene-AAX15_07535;Name=AAX15_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07535 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 10374 10646 . + 0 ID=cds-KKZ53470.1;Parent=gene-AAX15_07535;Dbxref=NCBI_GP:KKZ53470.1;Name=KKZ53470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44048.1;locus_tag=AAX15_07535;product=iron transporter;protein_id=KKZ53470.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 10661 11737 . + . ID=gene-AAX15_07540;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AAX15_07540 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 10661 11737 . + 0 ID=cds-KKZ53471.1;Parent=gene-AAX15_07540;Dbxref=NCBI_GP:KKZ53471.1;Name=KKZ53471.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641208.1;locus_tag=AAX15_07540;product=murein transglycosylase;protein_id=KKZ53471.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 11973 12048 . + . ID=gene-AAX15_07545;Name=AAX15_07545;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07545 GCA_001008275.1|LCTH01000053.1 tRNAscan-SE tRNA 11973 12048 . + . ID=rna-AAX15_07545;Parent=gene-AAX15_07545;anticodon=(pos:12006..12008);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07545;product=tRNA-Phe GCA_001008275.1|LCTH01000053.1 tRNAscan-SE exon 11973 12048 . + . ID=exon-AAX15_07545-1;Parent=rna-AAX15_07545;anticodon=(pos:12006..12008);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07545;product=tRNA-Phe GCA_001008275.1|LCTH01000053.1 Genbank gene 12051 12126 . + . ID=gene-AAX15_07550;Name=AAX15_07550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07550 GCA_001008275.1|LCTH01000053.1 tRNAscan-SE tRNA 12051 12126 . + . ID=rna-AAX15_07550;Parent=gene-AAX15_07550;anticodon=(pos:12084..12086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07550;product=tRNA-Asn GCA_001008275.1|LCTH01000053.1 tRNAscan-SE exon 12051 12126 . + . ID=exon-AAX15_07550-1;Parent=rna-AAX15_07550;anticodon=(pos:12084..12086);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07550;product=tRNA-Asn GCA_001008275.1|LCTH01000053.1 Protein Homology pseudogene 12600 13386 . + . ID=gene-AAX15_07555;Name=AAX15_07555;Note=disrupted;description=DNA primase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_07555;pseudo=true GCA_001008275.1|LCTH01000053.1 Protein Homology pseudogene 13559 14786 . - . ID=gene-AAX15_07560;Name=AAX15_07560;Note=disrupted;description=integrase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_07560;pseudo=true GCA_001008275.1|LCTH01000053.1 Genbank gene 14991 15076 . - . ID=gene-AAX15_07565;Name=AAX15_07565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07565 GCA_001008275.1|LCTH01000053.1 tRNAscan-SE tRNA 14991 15076 . - . ID=rna-AAX15_07565;Parent=gene-AAX15_07565;anticodon=(pos:complement(15040..15042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07565;product=tRNA-Leu GCA_001008275.1|LCTH01000053.1 tRNAscan-SE exon 14991 15076 . - . ID=exon-AAX15_07565-1;Parent=rna-AAX15_07565;anticodon=(pos:complement(15040..15042));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07565;product=tRNA-Leu GCA_001008275.1|LCTH01000053.1 Genbank gene 15102 15440 . - . ID=gene-AAX15_07570;Name=AAX15_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07570 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 15102 15440 . - 0 ID=cds-KKZ53472.1;Parent=gene-AAX15_07570;Dbxref=NCBI_GP:KKZ53472.1;Name=KKZ53472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634571.1;locus_tag=AAX15_07570;product=preprotein translocase subunit SecG;protein_id=KKZ53472.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 15549 17504 . - . ID=gene-AAX15_07575;Name=AAX15_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07575 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 15549 17504 . - 0 ID=cds-KKZ53473.1;Parent=gene-AAX15_07575;Dbxref=NCBI_GP:KKZ53473.1;Name=KKZ53473.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500211.1;locus_tag=AAX15_07575;product=DNA topoisomerase III;protein_id=KKZ53473.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 17520 18122 . - . ID=gene-AAX15_07580;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AAX15_07580 GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 17520 18122 . - 0 ID=cds-KKZ53474.1;Parent=gene-AAX15_07580;Dbxref=NCBI_GP:KKZ53474.1;Name=KKZ53474.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:SwissProt:P44712.1;locus_tag=AAX15_07580;product=recombination protein RecR;protein_id=KKZ53474.1;transl_table=11 GCA_001008275.1|LCTH01000053.1 Genbank gene 18185 18365 . - . ID=gene-AAX15_07585;Name=AAX15_07585;end_range=18365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07585;partial=true GCA_001008275.1|LCTH01000053.1 Protein Homology CDS 18185 18365 . - 1 ID=cds-KKZ53475.1;Parent=gene-AAX15_07585;Dbxref=NCBI_GP:KKZ53475.1;Name=KKZ53475.1;end_range=18365,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693719.1;locus_tag=AAX15_07585;partial=true;product=hypothetical protein;protein_id=KKZ53475.1;transl_table=11 ##sequence-region LCTH01000054.1 1 20224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000054.1 Genbank region 1 20224 . + . ID=LCTH01000054.1:1..20224;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000054.1 Genbank gene 1 954 . - . ID=gene-AAX15_07590;Name=AAX15_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07590;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 1 954 . - 0 ID=cds-KKZ53380.1;Parent=gene-AAX15_07590;Dbxref=NCBI_GP:KKZ53380.1;Name=KKZ53380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015093402.1;locus_tag=AAX15_07590;partial=true;product=hypothetical protein;protein_id=KKZ53380.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 1030 2778 . - . ID=gene-AAX15_07595;Name=AAX15_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07595 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 1030 2778 . - 0 ID=cds-KKZ53381.1;Parent=gene-AAX15_07595;Dbxref=NCBI_GP:KKZ53381.1;Name=KKZ53381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012077904.1;locus_tag=AAX15_07595;product=hypothetical protein;protein_id=KKZ53381.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 2802 3692 . - . ID=gene-AAX15_07600;Name=AAX15_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07600 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 2802 3692 . - 0 ID=cds-KKZ53382.1;Parent=gene-AAX15_07600;Dbxref=NCBI_GP:KKZ53382.1;Name=KKZ53382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634321.1;locus_tag=AAX15_07600;product=transcriptional regulator;protein_id=KKZ53382.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 3892 4227 . + . ID=gene-AAX15_07605;Name=AAX15_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07605 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 3892 4227 . + 0 ID=cds-KKZ53383.1;Parent=gene-AAX15_07605;Dbxref=NCBI_GP:KKZ53383.1;Name=KKZ53383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702031.1;locus_tag=AAX15_07605;product=DNA-binding protein;protein_id=KKZ53383.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 4362 5009 . - . ID=gene-AAX15_07610;Name=AAX15_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07610 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 4362 5009 . - 0 ID=cds-KKZ53384.1;Parent=gene-AAX15_07610;Dbxref=NCBI_GP:KKZ53384.1;Name=KKZ53384.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645593.1;locus_tag=AAX15_07610;product=superoxide dismutase;protein_id=KKZ53384.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 5271 5909 . + . ID=gene-AAX15_07615;Name=AAX15_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07615 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 5271 5909 . + 0 ID=cds-KKZ53385.1;Parent=gene-AAX15_07615;Dbxref=NCBI_GP:KKZ53385.1;Name=KKZ53385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665896.1;locus_tag=AAX15_07615;product=heme ABC transporter ATP-binding protein;protein_id=KKZ53385.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 5914 6579 . + . ID=gene-AAX15_07620;Name=AAX15_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07620 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 5914 6579 . + 0 ID=cds-KKZ53386.1;Parent=gene-AAX15_07620;Dbxref=NCBI_GP:KKZ53386.1;Name=KKZ53386.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659389.1;locus_tag=AAX15_07620;product=heme ABC transporter permease;protein_id=KKZ53386.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 6640 7380 . + . ID=gene-AAX15_07625;Name=AAX15_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07625 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 6640 7380 . + 0 ID=cds-KKZ53387.1;Parent=gene-AAX15_07625;Dbxref=NCBI_GP:KKZ53387.1;Name=KKZ53387.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690745.1;locus_tag=AAX15_07625;product=heme ABC transporter permease;protein_id=KKZ53387.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 7423 7626 . + . ID=gene-AAX15_07630;Name=AAX15_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07630 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 7423 7626 . + 0 ID=cds-KKZ53388.1;Parent=gene-AAX15_07630;Dbxref=NCBI_GP:KKZ53388.1;Name=KKZ53388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651736.1;locus_tag=AAX15_07630;product=hemagglutination activity protein;protein_id=KKZ53388.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 7623 8144 . + . ID=gene-AAX15_07635;Name=AAX15_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07635 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 7623 8144 . + 0 ID=cds-KKZ53389.1;Parent=gene-AAX15_07635;Dbxref=NCBI_GP:KKZ53389.1;Name=KKZ53389.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631161.1;locus_tag=AAX15_07635;product=cytochrome C biogenesis protein CcmE;protein_id=KKZ53389.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 8141 10087 . + . ID=gene-AAX15_07640;Name=AAX15_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07640 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 8141 10087 . + 0 ID=cds-KKZ53390.1;Parent=gene-AAX15_07640;Dbxref=NCBI_GP:KKZ53390.1;Name=KKZ53390.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996562.1;locus_tag=AAX15_07640;product=cytochrome C biogenesis protein CcmF;protein_id=KKZ53390.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 10200 10745 . + . ID=gene-AAX15_07645;Name=AAX15_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07645 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 10200 10745 . + 0 ID=cds-KKZ53391.1;Parent=gene-AAX15_07645;Dbxref=NCBI_GP:KKZ53391.1;Name=KKZ53391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634310.1;locus_tag=AAX15_07645;product=thiol:disulfide interchange protein;protein_id=KKZ53391.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 10745 11206 . + . ID=gene-AAX15_07650;Name=AAX15_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07650 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 10745 11206 . + 0 ID=cds-KKZ53392.1;Parent=gene-AAX15_07650;Dbxref=NCBI_GP:KKZ53392.1;Name=KKZ53392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702057.1;locus_tag=AAX15_07650;product=cytochrome C biogenesis protein;protein_id=KKZ53392.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 11207 12124 . + . ID=gene-AAX15_07655;Name=AAX15_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07655 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 11207 12124 . + 0 ID=cds-KKZ53393.1;Parent=gene-AAX15_07655;Dbxref=NCBI_GP:KKZ53393.1;Name=KKZ53393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550933.1;locus_tag=AAX15_07655;product=hypothetical protein;protein_id=KKZ53393.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 12232 12762 . + . ID=gene-AAX15_07660;Name=AAX15_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07660 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 12232 12762 . + 0 ID=cds-KKZ53394.1;Parent=gene-AAX15_07660;Dbxref=NCBI_GP:KKZ53394.1;Name=KKZ53394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631172.1;locus_tag=AAX15_07660;product=hypothetical protein;protein_id=KKZ53394.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 12772 13071 . + . ID=gene-AAX15_07665;Name=AAX15_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07665 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 12772 13071 . + 0 ID=cds-KKZ53395.1;Parent=gene-AAX15_07665;Dbxref=NCBI_GP:KKZ53395.1;Name=KKZ53395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642775.1;locus_tag=AAX15_07665;product=hypothetical protein;protein_id=KKZ53395.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 13864 14622 . - . ID=gene-AAX15_07670;Name=AAX15_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07670 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 13864 14622 . - 0 ID=cds-KKZ53396.1;Parent=gene-AAX15_07670;Dbxref=NCBI_GP:KKZ53396.1;Name=KKZ53396.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642772.1;locus_tag=AAX15_07670;product=uridine phosphorylase;protein_id=KKZ53396.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 14725 16224 . - . ID=gene-AAX15_07675;Name=AAX15_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07675 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 14725 16224 . - 0 ID=cds-KKZ53397.1;Parent=gene-AAX15_07675;Dbxref=NCBI_GP:KKZ53397.1;Name=KKZ53397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500862.1;locus_tag=AAX15_07675;product=ATP-binding protein;protein_id=KKZ53397.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 16349 17011 . + . ID=gene-AAX15_07680;Name=AAX15_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07680 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 16349 17011 . + 0 ID=cds-KKZ53398.1;Parent=gene-AAX15_07680;Dbxref=NCBI_GP:KKZ53398.1;Name=KKZ53398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500861.1;locus_tag=AAX15_07680;product=molybdenum cofactor sulfurase;protein_id=KKZ53398.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 17014 17496 . + . ID=gene-AAX15_07685;Name=AAX15_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07685 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 17014 17496 . + 0 ID=cds-KKZ53399.1;Parent=gene-AAX15_07685;Dbxref=NCBI_GP:KKZ53399.1;Name=KKZ53399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627841.1;locus_tag=AAX15_07685;product=preprotein translocase subunit SecA;protein_id=KKZ53399.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 17493 18290 . + . ID=gene-AAX15_07690;Name=AAX15_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07690 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 17493 18290 . + 0 ID=cds-KKZ53400.1;Parent=gene-AAX15_07690;Dbxref=NCBI_GP:KKZ53400.1;Name=KKZ53400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627839.1;locus_tag=AAX15_07690;product=membrane protein;protein_id=KKZ53400.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 18334 19989 . - . ID=gene-AAX15_07695;Name=AAX15_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07695 GCA_001008275.1|LCTH01000054.1 Protein Homology CDS 18334 19989 . - 0 ID=cds-KKZ53401.1;Parent=gene-AAX15_07695;Dbxref=NCBI_GP:KKZ53401.1;Name=KKZ53401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644285.1;locus_tag=AAX15_07695;product=membrane protein;protein_id=KKZ53401.1;transl_table=11 GCA_001008275.1|LCTH01000054.1 Genbank gene 20112 20187 . - . ID=gene-AAX15_07700;Name=AAX15_07700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07700 GCA_001008275.1|LCTH01000054.1 tRNAscan-SE tRNA 20112 20187 . - . ID=rna-AAX15_07700;Parent=gene-AAX15_07700;anticodon=(pos:complement(20152..20154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07700;product=tRNA-Val GCA_001008275.1|LCTH01000054.1 tRNAscan-SE exon 20112 20187 . - . ID=exon-AAX15_07700-1;Parent=rna-AAX15_07700;anticodon=(pos:complement(20152..20154));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07700;product=tRNA-Val ##sequence-region LCTH01000055.1 1 38236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000055.1 Genbank region 1 38236 . + . ID=LCTH01000055.1:1..38236;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000055.1 Genbank gene 1 305 . + . ID=gene-AAX15_07705;Name=AAX15_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07705;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 1 305 . + 2 ID=cds-KKZ53334.1;Parent=gene-AAX15_07705;Dbxref=NCBI_GP:KKZ53334.1;Name=KKZ53334.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995166.1;locus_tag=AAX15_07705;partial=true;product=ATP F0F1 synthase subunit gamma;protein_id=KKZ53334.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 322 1695 . + . ID=gene-AAX15_07710;Name=AAX15_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07710 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 322 1695 . + 0 ID=cds-KKZ53335.1;Parent=gene-AAX15_07710;Dbxref=NCBI_GP:KKZ53335.1;Name=KKZ53335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632228.1;locus_tag=AAX15_07710;product=ATP synthase F0F1 subunit beta;protein_id=KKZ53335.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 1726 2154 . + . ID=gene-AAX15_07715;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AAX15_07715 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 1726 2154 . + 0 ID=cds-KKZ53336.1;Parent=gene-AAX15_07715;Dbxref=NCBI_GP:KKZ53336.1;Name=KKZ53336.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;inference=EXISTENCE: similar to AA sequence:SwissProt:P43718.1;locus_tag=AAX15_07715;product=ATP synthase F0F1 subunit epsilon;protein_id=KKZ53336.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 2199 3062 . - . ID=gene-AAX15_07720;Name=AAX15_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07720 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 2199 3062 . - 0 ID=cds-KKZ53337.1;Parent=gene-AAX15_07720;Dbxref=NCBI_GP:KKZ53337.1;Name=KKZ53337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638373.1;locus_tag=AAX15_07720;product=hypothetical protein;protein_id=KKZ53337.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 3081 4940 . - . ID=gene-AAX15_07725;Name=AAX15_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07725 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 3081 4940 . - 0 ID=cds-KKZ53338.1;Parent=gene-AAX15_07725;Dbxref=NCBI_GP:KKZ53338.1;Name=KKZ53338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43927.1;locus_tag=AAX15_07725;product=translation elongation factor;protein_id=KKZ53338.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 4937 6322 . - . ID=gene-AAX15_07730;Name=AAX15_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07730 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 4937 6322 . - 0 ID=cds-KKZ53339.1;Parent=gene-AAX15_07730;Dbxref=NCBI_GP:KKZ53339.1;Name=KKZ53339.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632236.1;locus_tag=AAX15_07730;product=selenocysteine synthase;protein_id=KKZ53339.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 6393 6487 . + . ID=gene-AAX15_07735;Name=AAX15_07735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_07735 GCA_001008275.1|LCTH01000055.1 tRNAscan-SE tRNA 6393 6487 . + . ID=rna-AAX15_07735;Parent=gene-AAX15_07735;anticodon=(pos:6427..6429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07735;product=tRNA-Sec GCA_001008275.1|LCTH01000055.1 tRNAscan-SE exon 6393 6487 . + . ID=exon-AAX15_07735-1;Parent=rna-AAX15_07735;anticodon=(pos:6427..6429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_07735;product=tRNA-Sec GCA_001008275.1|LCTH01000055.1 Genbank gene 6597 8051 . - . ID=gene-AAX15_07740;Name=AAX15_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07740 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 6597 8051 . - 0 ID=cds-KKZ53340.1;Parent=gene-AAX15_07740;Dbxref=NCBI_GP:KKZ53340.1;Name=KKZ53340.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527389.1;locus_tag=AAX15_07740;product=aminoacyl-histidine dipeptidase;protein_id=KKZ53340.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 8158 8625 . + . ID=gene-AAX15_07745;Name=AAX15_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07745 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 8158 8625 . + 0 ID=cds-KKZ53341.1;Parent=gene-AAX15_07745;Dbxref=NCBI_GP:KKZ53341.1;Name=KKZ53341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43859.1;locus_tag=AAX15_07745;product=xanthine phosphoribosyltransferase;protein_id=KKZ53341.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 8709 10220 . - . ID=gene-AAX15_07750;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=AAX15_07750 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 8709 10220 . - 0 ID=cds-KKZ53342.1;Parent=gene-AAX15_07750;Dbxref=NCBI_GP:KKZ53342.1;Name=KKZ53342.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658430.1;locus_tag=AAX15_07750;product=glycerol kinase;protein_id=KKZ53342.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 10241 11035 . - . ID=gene-AAX15_07755;Name=AAX15_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07755 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 10241 11035 . - 0 ID=cds-KKZ53343.1;Parent=gene-AAX15_07755;Dbxref=NCBI_GP:KKZ53343.1;Name=KKZ53343.1;Note=involved in the transport of glycerol into the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44826.1;locus_tag=AAX15_07755;product=glycerol uptake facilitator GlpF;protein_id=KKZ53343.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 11267 12361 . - . ID=gene-AAX15_07760;Name=AAX15_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07760 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 11267 12361 . - 0 ID=cds-KKZ53344.1;Parent=gene-AAX15_07760;Dbxref=NCBI_GP:KKZ53344.1;Name=KKZ53344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635289.1;locus_tag=AAX15_07760;product=phosphodiesterase;protein_id=KKZ53344.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 12465 13907 . - . ID=gene-AAX15_07765;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AAX15_07765 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 12465 13907 . - 0 ID=cds-KKZ53345.1;Parent=gene-AAX15_07765;Dbxref=NCBI_GP:KKZ53345.1;Name=KKZ53345.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064617.1;locus_tag=AAX15_07765;product=sn-glycerol-3-phosphate transporter;protein_id=KKZ53345.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 14201 15892 . + . ID=gene-AAX15_07770;Name=AAX15_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07770 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 14201 15892 . + 0 ID=cds-KKZ53346.1;Parent=gene-AAX15_07770;Dbxref=NCBI_GP:KKZ53346.1;Name=KKZ53346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644115.1;locus_tag=AAX15_07770;product=glycerol-3-phosphate dehydrogenase;protein_id=KKZ53346.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 15882 17180 . + . ID=gene-AAX15_07775;Name=AAX15_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07775 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 15882 17180 . + 0 ID=cds-KKZ53347.1;Parent=gene-AAX15_07775;Dbxref=NCBI_GP:KKZ53347.1;Name=KKZ53347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE48.1;locus_tag=AAX15_07775;product=glycerol-3-phosphate dehydrogenase;protein_id=KKZ53347.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 17192 18472 . + . ID=gene-AAX15_07780;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AAX15_07780 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 17192 18472 . + 0 ID=cds-KKZ53348.1;Parent=gene-AAX15_07780;Dbxref=NCBI_GP:KKZ53348.1;Name=KKZ53348.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629397.1;locus_tag=AAX15_07780;product=glycerol-3-phosphate dehydrogenase;protein_id=KKZ53348.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 18750 19742 . - . ID=gene-AAX15_07785;Name=AAX15_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07785 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 18750 19742 . - 0 ID=cds-KKZ53349.1;Parent=gene-AAX15_07785;Dbxref=NCBI_GP:KKZ53349.1;Name=KKZ53349.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701738.1;locus_tag=AAX15_07785;product=asparagine synthetase AsnA;protein_id=KKZ53349.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 19896 20348 . + . ID=gene-AAX15_07790;Name=AAX15_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07790 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 19896 20348 . + 0 ID=cds-KKZ53350.1;Parent=gene-AAX15_07790;Dbxref=NCBI_GP:KKZ53350.1;Name=KKZ53350.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759648.1;locus_tag=AAX15_07790;product=transcriptional regulator;protein_id=KKZ53350.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 20374 20769 . - . ID=gene-AAX15_07795;Name=AAX15_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07795 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 20374 20769 . - 0 ID=cds-KKZ53351.1;Parent=gene-AAX15_07795;Dbxref=NCBI_GP:KKZ53351.1;Name=KKZ53351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626656.1;locus_tag=AAX15_07795;product=ribosome-associated heat shock protein Hsp15;protein_id=KKZ53351.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 20840 21397 . + . ID=gene-AAX15_07800;Name=AAX15_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07800 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 20840 21397 . + 0 ID=cds-KKZ53352.1;Parent=gene-AAX15_07800;Dbxref=NCBI_GP:KKZ53352.1;Name=KKZ53352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636136.1;locus_tag=AAX15_07800;product=ADP-ribose diphosphatase;protein_id=KKZ53352.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 21642 23630 . + . ID=gene-AAX15_07805;Name=AAX15_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07805 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 21642 23630 . + 0 ID=cds-KKZ53353.1;Parent=gene-AAX15_07805;Dbxref=NCBI_GP:KKZ53353.1;Name=KKZ53353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44016.2;locus_tag=AAX15_07805;product=oligopeptide transporter;protein_id=KKZ53353.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 23684 24100 . + . ID=gene-AAX15_07810;Name=AAX15_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07810 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 23684 24100 . + 0 ID=cds-KKZ53354.1;Parent=gene-AAX15_07810;Dbxref=NCBI_GP:KKZ53354.1;Name=KKZ53354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526395.1;locus_tag=AAX15_07810;product=hypothetical protein;protein_id=KKZ53354.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 24105 24914 . + . ID=gene-AAX15_07815;Name=AAX15_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07815 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 24105 24914 . + 0 ID=cds-KKZ53355.1;Parent=gene-AAX15_07815;Dbxref=NCBI_GP:KKZ53355.1;Name=KKZ53355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44332.2;locus_tag=AAX15_07815;product=3'-5'-bisphosphate nucleotidase;protein_id=KKZ53355.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 24990 26474 . + . ID=gene-AAX15_07820;Name=AAX15_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07820 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 24990 26474 . + 0 ID=cds-KKZ53356.1;Parent=gene-AAX15_07820;Dbxref=NCBI_GP:KKZ53356.1;Name=KKZ53356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356969.1;locus_tag=AAX15_07820;product=glucose-6-phosphate dehydrogenase;protein_id=KKZ53356.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 26559 27257 . + . ID=gene-AAX15_07825;Name=AAX15_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07825 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 26559 27257 . + 0 ID=cds-KKZ53357.1;Parent=gene-AAX15_07825;Dbxref=NCBI_GP:KKZ53357.1;Name=KKZ53357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961644.1;locus_tag=AAX15_07825;product=6-phosphogluconolactonase;protein_id=KKZ53357.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 27284 27676 . + . ID=gene-AAX15_07830;Name=AAX15_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07830 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 27284 27676 . + 0 ID=cds-KKZ53358.1;Parent=gene-AAX15_07830;Dbxref=NCBI_GP:KKZ53358.1;Name=KKZ53358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644591.1;locus_tag=AAX15_07830;product=GCN5 family acetyltransferase;protein_id=KKZ53358.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 27737 28069 . + . ID=gene-AAX15_07835;Name=AAX15_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07835 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 27737 28069 . + 0 ID=cds-KKZ53359.1;Parent=gene-AAX15_07835;Dbxref=NCBI_GP:KKZ53359.1;Name=KKZ53359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698916.1;locus_tag=AAX15_07835;product=n-acetylglutamate synthase;protein_id=KKZ53359.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 28405 29460 . + . ID=gene-AAX15_07840;Name=AAX15_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07840 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 28405 29460 . + 0 ID=cds-KKZ53360.1;Parent=gene-AAX15_07840;Dbxref=NCBI_GP:KKZ53360.1;Name=KKZ53360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005927244.1;locus_tag=AAX15_07840;product=hypothetical protein;protein_id=KKZ53360.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 29511 30965 . + . ID=gene-AAX15_07845;Name=AAX15_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07845 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 29511 30965 . + 0 ID=cds-KKZ53361.1;Parent=gene-AAX15_07845;Dbxref=NCBI_GP:KKZ53361.1;Name=KKZ53361.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005714317.1;locus_tag=AAX15_07845;product=6-phosphogluconate dehydrogenase;protein_id=KKZ53361.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 31098 32420 . - . ID=gene-AAX15_07850;Name=AAX15_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07850 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 31098 32420 . - 0 ID=cds-KKZ53362.1;Parent=gene-AAX15_07850;Dbxref=NCBI_GP:KKZ53362.1;Name=KKZ53362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499575.1;locus_tag=AAX15_07850;product=C4-dicarboxylate ABC transporter;protein_id=KKZ53362.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 32669 33115 . + . ID=gene-AAX15_07855;Name=AAX15_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07855 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 32669 33115 . + 0 ID=cds-KKZ53363.1;Parent=gene-AAX15_07855;Dbxref=NCBI_GP:KKZ53363.1;Name=KKZ53363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629414.1;locus_tag=AAX15_07855;product=hypothetical protein;protein_id=KKZ53363.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 33129 33638 . + . ID=gene-AAX15_07860;Name=AAX15_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07860 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 33129 33638 . + 0 ID=cds-KKZ53364.1;Parent=gene-AAX15_07860;Dbxref=NCBI_GP:KKZ53364.1;Name=KKZ53364.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551082.1;locus_tag=AAX15_07860;product=preprotein translocase subunit SecB;protein_id=KKZ53364.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 33707 34414 . - . ID=gene-AAX15_07865;Name=AAX15_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07865 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 33707 34414 . - 0 ID=cds-KKZ53365.1;Parent=gene-AAX15_07865;Dbxref=NCBI_GP:KKZ53365.1;Name=KKZ53365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640293.1;locus_tag=AAX15_07865;product=acid phosphatase;protein_id=KKZ53365.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 34633 35160 . + . ID=gene-AAX15_07870;Name=AAX15_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07870 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 34633 35160 . + 0 ID=cds-KKZ53366.1;Parent=gene-AAX15_07870;Dbxref=NCBI_GP:KKZ53366.1;Name=KKZ53366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538653.1;locus_tag=AAX15_07870;product=peptidase;protein_id=KKZ53366.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 35170 36504 . + . ID=gene-AAX15_07875;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AAX15_07875 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 35170 36504 . + 0 ID=cds-KKZ53367.1;Parent=gene-AAX15_07875;Dbxref=NCBI_GP:KKZ53367.1;Name=KKZ53367.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550388.1;locus_tag=AAX15_07875;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=KKZ53367.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 36732 37406 . - . ID=gene-AAX15_07880;Name=AAX15_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07880 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 36732 37406 . - 0 ID=cds-KKZ53368.1;Parent=gene-AAX15_07880;Dbxref=NCBI_GP:KKZ53368.1;Name=KKZ53368.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499561.1;locus_tag=AAX15_07880;product=phosphoglycolate phosphatase;protein_id=KKZ53368.1;transl_table=11 GCA_001008275.1|LCTH01000055.1 Genbank gene 37452 38126 . - . ID=gene-AAX15_07885;Name=AAX15_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07885 GCA_001008275.1|LCTH01000055.1 Protein Homology CDS 37452 38126 . - 0 ID=cds-KKZ53369.1;Parent=gene-AAX15_07885;Dbxref=NCBI_GP:KKZ53369.1;Name=KKZ53369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701739.1;locus_tag=AAX15_07885;product=ribulose-phosphate 3-epimerase;protein_id=KKZ53369.1;transl_table=11 ##sequence-region LCTH01000056.1 1 21080 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000056.1 Genbank region 1 21080 . + . ID=LCTH01000056.1:1..21080;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000056.1 Genbank gene 1 729 . + . ID=gene-AAX15_07890;Name=AAX15_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07890;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 1 729 . + 0 ID=cds-KKZ53298.1;Parent=gene-AAX15_07890;Dbxref=NCBI_GP:KKZ53298.1;Name=KKZ53298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771186.1;locus_tag=AAX15_07890;partial=true;product=hypothetical protein;protein_id=KKZ53298.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 793 2238 . + . ID=gene-AAX15_07895;Name=AAX15_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07895 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 793 2238 . + 0 ID=cds-KKZ53299.1;Parent=gene-AAX15_07895;Dbxref=NCBI_GP:KKZ53299.1;Name=KKZ53299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701973.1;locus_tag=AAX15_07895;product=hypothetical protein;protein_id=KKZ53299.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 2348 2605 . + . ID=gene-AAX15_07900;Name=AAX15_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07900 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 2348 2605 . + 0 ID=cds-KKZ53300.1;Parent=gene-AAX15_07900;Dbxref=NCBI_GP:KKZ53300.1;Name=KKZ53300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272322.1;locus_tag=AAX15_07900;product=membrane protein;protein_id=KKZ53300.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 2602 4056 . + . ID=gene-AAX15_07905;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AAX15_07905 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 2602 4056 . + 0 ID=cds-KKZ53301.1;Parent=gene-AAX15_07905;Dbxref=NCBI_GP:KKZ53301.1;Name=KKZ53301.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639151.1;locus_tag=AAX15_07905;product=sodium/panthothenate symporter;protein_id=KKZ53301.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 4176 5048 . + . ID=gene-AAX15_07910;Name=AAX15_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07910 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 4176 5048 . + 0 ID=cds-KKZ53302.1;Parent=gene-AAX15_07910;Dbxref=NCBI_GP:KKZ53302.1;Name=KKZ53302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995622.1;locus_tag=AAX15_07910;product=transporter;protein_id=KKZ53302.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 5083 5970 . + . ID=gene-AAX15_07915;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AAX15_07915 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 5083 5970 . + 0 ID=cds-KKZ53303.1;Parent=gene-AAX15_07915;Dbxref=NCBI_GP:KKZ53303.1;Name=KKZ53303.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693321.1;locus_tag=AAX15_07915;product=ribosomal protein L11 methyltransferase;protein_id=KKZ53303.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 6117 7097 . + . ID=gene-AAX15_07920;Name=AAX15_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07920 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 6117 7097 . + 0 ID=cds-KKZ53304.1;Parent=gene-AAX15_07920;Dbxref=NCBI_GP:KKZ53304.1;Name=KKZ53304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272326.1;locus_tag=AAX15_07920;product=tRNA-dihydrouridine synthase B;protein_id=KKZ53304.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 7091 7390 . + . ID=gene-AAX15_07925;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AAX15_07925 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 7091 7390 . + 0 ID=cds-KKZ53305.1;Parent=gene-AAX15_07925;Dbxref=NCBI_GP:KKZ53305.1;Name=KKZ53305.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65V72.1;locus_tag=AAX15_07925;product=Fis family transcriptional regulator;protein_id=KKZ53305.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 7510 9342 . - . ID=gene-AAX15_07930;Name=AAX15_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07930 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 7510 9342 . - 0 ID=cds-KKZ53306.1;Parent=gene-AAX15_07930;Dbxref=NCBI_GP:KKZ53306.1;Name=KKZ53306.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355475.1;locus_tag=AAX15_07930;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=KKZ53306.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 9398 10171 . - . ID=gene-AAX15_07935;Name=AAX15_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07935 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 9398 10171 . - 0 ID=cds-KKZ53307.1;Parent=gene-AAX15_07935;Dbxref=NCBI_GP:KKZ53307.1;Name=KKZ53307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641277.1;locus_tag=AAX15_07935;product=XRE family transcriptional regulator;protein_id=KKZ53307.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 10299 10571 . - . ID=gene-AAX15_07940;Name=AAX15_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07940 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 10299 10571 . - 0 ID=cds-KKZ53308.1;Parent=gene-AAX15_07940;Dbxref=NCBI_GP:KKZ53308.1;Name=KKZ53308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355477.1;locus_tag=AAX15_07940;product=DNA-binding protein;protein_id=KKZ53308.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 10708 11298 . - . ID=gene-AAX15_07945;Name=AAX15_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07945 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 10708 11298 . - 0 ID=cds-KKZ53309.1;Parent=gene-AAX15_07945;Dbxref=NCBI_GP:KKZ53309.1;Name=KKZ53309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649296.1;locus_tag=AAX15_07945;product=hypothetical protein;protein_id=KKZ53309.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 11334 12128 . - . ID=gene-AAX15_07950;Name=AAX15_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07950 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 11334 12128 . - 0 ID=cds-KKZ53310.1;Parent=gene-AAX15_07950;Dbxref=NCBI_GP:KKZ53310.1;Name=KKZ53310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646856.1;locus_tag=AAX15_07950;product=NADH pyrophosphatase;protein_id=KKZ53310.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 12196 12792 . - . ID=gene-AAX15_07955;Name=AAX15_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07955 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 12196 12792 . - 0 ID=cds-KKZ53311.1;Parent=gene-AAX15_07955;Dbxref=NCBI_GP:KKZ53311.1;Name=KKZ53311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526479.1;locus_tag=AAX15_07955;product=amino acid ABC transporter substrate-binding protein;protein_id=KKZ53311.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 12868 13554 . - . ID=gene-AAX15_07960;Name=AAX15_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07960 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 12868 13554 . - 0 ID=cds-KKZ53320.1;Parent=gene-AAX15_07960;Dbxref=NCBI_GP:KKZ53320.1;Name=KKZ53320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634547.1;locus_tag=AAX15_07960;product=competence protein ComF;protein_id=KKZ53320.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 13567 14904 . - . ID=gene-AAX15_07965;Name=AAX15_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07965 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 13567 14904 . - 0 ID=cds-KKZ53312.1;Parent=gene-AAX15_07965;Dbxref=NCBI_GP:KKZ53312.1;Name=KKZ53312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500203.1;locus_tag=AAX15_07965;product=secretin;protein_id=KKZ53312.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 14914 15327 . - . ID=gene-AAX15_07970;Name=AAX15_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07970 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 14914 15327 . - 0 ID=cds-KKZ53313.1;Parent=gene-AAX15_07970;Dbxref=NCBI_GP:KKZ53313.1;Name=KKZ53313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646770.1;locus_tag=AAX15_07970;product=competence protein;protein_id=KKZ53313.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 15324 15845 . - . ID=gene-AAX15_07975;Name=AAX15_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07975 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 15324 15845 . - 0 ID=cds-KKZ53314.1;Parent=gene-AAX15_07975;Dbxref=NCBI_GP:KKZ53314.1;Name=KKZ53314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649304.1;locus_tag=AAX15_07975;product=competence protein C;protein_id=KKZ53314.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 15842 16348 . - . ID=gene-AAX15_07980;Name=AAX15_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07980 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 15842 16348 . - 0 ID=cds-KKZ53315.1;Parent=gene-AAX15_07980;Dbxref=NCBI_GP:KKZ53315.1;Name=KKZ53315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500206.1;locus_tag=AAX15_07980;product=competence protein B;protein_id=KKZ53315.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 16349 17146 . - . ID=gene-AAX15_07985;Name=AAX15_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07985 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 16349 17146 . - 0 ID=cds-KKZ53316.1;Parent=gene-AAX15_07985;Dbxref=NCBI_GP:KKZ53316.1;Name=KKZ53316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639119.1;locus_tag=AAX15_07985;product=competence protein ComA;protein_id=KKZ53316.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 17245 19845 . + . ID=gene-AAX15_07990;Name=AAX15_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07990 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 17245 19845 . + 0 ID=cds-KKZ53317.1;Parent=gene-AAX15_07990;Dbxref=NCBI_GP:KKZ53317.1;Name=KKZ53317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639117.1;locus_tag=AAX15_07990;product=penicillin-binding protein;protein_id=KKZ53317.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 19918 20763 . + . ID=gene-AAX15_07995;Name=AAX15_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_07995 GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 19918 20763 . + 0 ID=cds-KKZ53318.1;Parent=gene-AAX15_07995;Dbxref=NCBI_GP:KKZ53318.1;Name=KKZ53318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995138.1;locus_tag=AAX15_07995;product=ribosomal RNA large subunit methyltransferase J;protein_id=KKZ53318.1;transl_table=11 GCA_001008275.1|LCTH01000056.1 Genbank gene 20932 21080 . + . ID=gene-AAX15_08000;Name=AAX15_08000;end_range=21080,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08000;partial=true GCA_001008275.1|LCTH01000056.1 Protein Homology CDS 20932 21080 . + 0 ID=cds-KKZ53319.1;Parent=gene-AAX15_08000;Dbxref=NCBI_GP:KKZ53319.1;Name=KKZ53319.1;end_range=21080,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693719.1;locus_tag=AAX15_08000;partial=true;product=hypothetical protein;protein_id=KKZ53319.1;transl_table=11 ##sequence-region LCTH01000057.1 1 153135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000057.1 Genbank region 1 153135 . + . ID=LCTH01000057.1:1..153135;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000057.1 Genbank gene 163 972 . - . ID=gene-AAX15_08005;Name=AAX15_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08005 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 163 972 . - 0 ID=cds-KKZ53054.1;Parent=gene-AAX15_08005;Dbxref=NCBI_GP:KKZ53054.1;Name=KKZ53054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638643.1;locus_tag=AAX15_08005;product=glutamate racemase;protein_id=KKZ53054.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 1002 3083 . - . ID=gene-AAX15_08010;Name=AAX15_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08010 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 1002 3083 . - 0 ID=cds-KKZ53055.1;Parent=gene-AAX15_08010;Dbxref=NCBI_GP:KKZ53055.1;Name=KKZ53055.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43809.1;locus_tag=AAX15_08010;product=ATP-dependent DNA helicase RecG;protein_id=KKZ53055.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 3080 5194 . - . ID=gene-AAX15_08015;Name=AAX15_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08015 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 3080 5194 . - 0 ID=cds-KKZ53056.1;Parent=gene-AAX15_08015;Dbxref=NCBI_GP:KKZ53056.1;Name=KKZ53056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643684.1;locus_tag=AAX15_08015;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=KKZ53056.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 5267 5533 . - . ID=gene-AAX15_08020;Name=AAX15_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08020 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 5267 5533 . - 0 ID=cds-KKZ53057.1;Parent=gene-AAX15_08020;Dbxref=NCBI_GP:KKZ53057.1;Name=KKZ53057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995753.1;locus_tag=AAX15_08020;product=DNA-directed RNA polymerase subunit omega;protein_id=KKZ53057.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 5596 6222 . - . ID=gene-AAX15_08025;Name=AAX15_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08025 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 5596 6222 . - 0 ID=cds-KKZ53058.1;Parent=gene-AAX15_08025;Dbxref=NCBI_GP:KKZ53058.1;Name=KKZ53058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646462.1;locus_tag=AAX15_08025;product=guanylate kinase;protein_id=KKZ53058.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 6473 7492 . + . ID=gene-AAX15_08030;Name=AAX15_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08030 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 6473 7492 . + 0 ID=cds-KKZ53059.1;Parent=gene-AAX15_08030;Dbxref=NCBI_GP:KKZ53059.1;Name=KKZ53059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326504.1;locus_tag=AAX15_08030;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=KKZ53059.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 7686 9494 . + . ID=gene-AAX15_08035;Name=AAX15_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08035 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 7686 9494 . + 0 ID=cds-KKZ53060.1;Parent=gene-AAX15_08035;Dbxref=NCBI_GP:KKZ53060.1;Name=KKZ53060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766891.1;locus_tag=AAX15_08035;product=long-chain fatty acid--CoA ligase;protein_id=KKZ53060.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 9532 10317 . - . ID=gene-AAX15_08040;Name=AAX15_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08040 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 9532 10317 . - 0 ID=cds-KKZ53061.1;Parent=gene-AAX15_08040;Dbxref=NCBI_GP:KKZ53061.1;Name=KKZ53061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693895.1;locus_tag=AAX15_08040;product=hypothetical protein;protein_id=KKZ53061.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 10336 10800 . - . ID=gene-AAX15_08045;Name=AAX15_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08045 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 10336 10800 . - 0 ID=cds-KKZ53062.1;Parent=gene-AAX15_08045;Dbxref=NCBI_GP:KKZ53062.1;Name=KKZ53062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634940.1;locus_tag=AAX15_08045;product=metal-binding heat shock protein;protein_id=KKZ53062.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 10802 11884 . - . ID=gene-AAX15_08050;Name=AAX15_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08050 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 10802 11884 . - 0 ID=cds-KKZ53063.1;Parent=gene-AAX15_08050;Dbxref=NCBI_GP:KKZ53063.1;Name=KKZ53063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625772.1;locus_tag=AAX15_08050;product=nucleoside triphosphate hydrolase;protein_id=KKZ53063.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 12019 13566 . + . ID=gene-AAX15_08055;Name=AAX15_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08055 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 12019 13566 . + 0 ID=cds-KKZ53064.1;Parent=gene-AAX15_08055;Dbxref=NCBI_GP:KKZ53064.1;Name=KKZ53064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637776.1;locus_tag=AAX15_08055;product=methyltransferase;protein_id=KKZ53064.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 13733 14731 . + . ID=gene-AAX15_08060;Name=AAX15_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08060 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 13733 14731 . + 0 ID=cds-KKZ53065.1;Parent=gene-AAX15_08060;Dbxref=NCBI_GP:KKZ53065.1;Name=KKZ53065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646426.1;locus_tag=AAX15_08060;product=iron ABC transporter substrate-binding protein;protein_id=KKZ53065.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 14802 16322 . + . ID=gene-AAX15_08065;Name=AAX15_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08065 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 14802 16322 . + 0 ID=cds-KKZ53066.1;Parent=gene-AAX15_08065;Dbxref=NCBI_GP:KKZ53066.1;Name=KKZ53066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759099.1;locus_tag=AAX15_08065;product=Fe3+ dicitrate ABC transporter permease;protein_id=KKZ53066.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 16309 17379 . + . ID=gene-AAX15_08070;Name=AAX15_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08070 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 16309 17379 . + 0 ID=cds-KKZ53067.1;Parent=gene-AAX15_08070;Dbxref=NCBI_GP:KKZ53067.1;Name=KKZ53067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630480.1;locus_tag=AAX15_08070;product=peptide ABC transporter substrate-binding protein;protein_id=KKZ53067.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 17415 18095 . - . ID=gene-AAX15_08075;Name=AAX15_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08075 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 17415 18095 . - 0 ID=cds-KKZ53068.1;Parent=gene-AAX15_08075;Dbxref=NCBI_GP:KKZ53068.1;Name=KKZ53068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634947.1;locus_tag=AAX15_08075;product=peptidase M15;protein_id=KKZ53068.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 18097 19230 . - . ID=gene-AAX15_08080;Name=AAX15_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08080 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 18097 19230 . - 0 ID=cds-KKZ53069.1;Parent=gene-AAX15_08080;Dbxref=NCBI_GP:KKZ53069.1;Name=KKZ53069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766881.1;locus_tag=AAX15_08080;product=succinyl-diaminopimelate desuccinylase;protein_id=KKZ53069.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 19258 19602 . - . ID=gene-AAX15_08085;Name=AAX15_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08085 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 19258 19602 . - 0 ID=cds-KKZ53070.1;Parent=gene-AAX15_08085;Dbxref=NCBI_GP:KKZ53070.1;Name=KKZ53070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766880.1;locus_tag=AAX15_08085;product=hypothetical protein;protein_id=KKZ53070.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 19913 20269 . + . ID=gene-AAX15_08090;Name=AAX15_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08090 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 19913 20269 . + 0 ID=cds-KKZ53071.1;Parent=gene-AAX15_08090;Dbxref=NCBI_GP:KKZ53071.1;Name=KKZ53071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646368.1;locus_tag=AAX15_08090;product=hypothetical protein;protein_id=KKZ53071.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 20301 22181 . - . ID=gene-AAX15_08095;Name=AAX15_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08095 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 20301 22181 . - 0 ID=cds-KKZ53072.1;Parent=gene-AAX15_08095;Dbxref=NCBI_GP:KKZ53072.1;Name=KKZ53072.1;Note=molecular chaperone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671989.1;locus_tag=AAX15_08095;product=heat shock protein 90;protein_id=KKZ53072.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 22303 23364 . - . ID=gene-AAX15_08100;Name=AAX15_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08100 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 22303 23364 . - 0 ID=cds-KKZ53073.1;Parent=gene-AAX15_08100;Dbxref=NCBI_GP:KKZ53073.1;Name=KKZ53073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643660.1;locus_tag=AAX15_08100;product=hypothetical protein;protein_id=KKZ53073.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 23623 25803 . + . ID=gene-AAX15_08105;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=AAX15_08105 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 23623 25803 . + 0 ID=cds-KKZ53074.1;Parent=gene-AAX15_08105;Dbxref=NCBI_GP:KKZ53074.1;Name=KKZ53074.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634955.1;locus_tag=AAX15_08105;product=DNA-dependent helicase II;protein_id=KKZ53074.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 25893 26894 . + . ID=gene-AAX15_08110;Name=AAX15_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08110 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 25893 26894 . + 0 ID=cds-KKZ53075.1;Parent=gene-AAX15_08110;Dbxref=NCBI_GP:KKZ53075.1;Name=KKZ53075.1;Note=transports peptides consisting of two or three amino acids;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637760.1;locus_tag=AAX15_08110;product=peptide ABC transporter permease;protein_id=KKZ53075.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 26909 27796 . + . ID=gene-AAX15_08115;Name=AAX15_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08115 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 26909 27796 . + 0 ID=cds-KKZ53076.1;Parent=gene-AAX15_08115;Dbxref=NCBI_GP:KKZ53076.1;Name=KKZ53076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526030.1;locus_tag=AAX15_08115;product=peptide transporter;protein_id=KKZ53076.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 27806 28798 . + . ID=gene-AAX15_08120;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AAX15_08120 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 27806 28798 . + 0 ID=cds-KKZ53077.1;Parent=gene-AAX15_08120;Dbxref=NCBI_GP:KKZ53077.1;Name=KKZ53077.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766872.1;locus_tag=AAX15_08120;product=peptide ABC transporter ATP-binding protein;protein_id=KKZ53077.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 28801 29784 . + . ID=gene-AAX15_08125;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AAX15_08125 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 28801 29784 . + 0 ID=cds-KKZ53078.1;Parent=gene-AAX15_08125;Dbxref=NCBI_GP:KKZ53078.1;Name=KKZ53078.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766871.1;locus_tag=AAX15_08125;product=peptide ABC transporter ATP-binding protein;protein_id=KKZ53078.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 29813 30619 . - . ID=gene-AAX15_08130;Name=AAX15_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08130 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 29813 30619 . - 0 ID=cds-KKZ53079.1;Parent=gene-AAX15_08130;Dbxref=NCBI_GP:KKZ53079.1;Name=KKZ53079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646459.1;locus_tag=AAX15_08130;product=DNA ligase;protein_id=KKZ53079.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 30827 31411 . + . ID=gene-AAX15_08135;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AAX15_08135 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 30827 31411 . + 0 ID=cds-KKZ53080.1;Parent=gene-AAX15_08135;Dbxref=NCBI_GP:KKZ53080.1;Name=KKZ53080.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637751.1;locus_tag=AAX15_08135;product=phosphoheptose isomerase;protein_id=KKZ53080.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 31537 32268 . + . ID=gene-AAX15_08140;Name=AAX15_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08140 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 31537 32268 . + 0 ID=cds-KKZ53081.1;Parent=gene-AAX15_08140;Dbxref=NCBI_GP:KKZ53081.1;Name=KKZ53081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646341.1;locus_tag=AAX15_08140;product=arginine ABC transporter ATP-binding protein;protein_id=KKZ53081.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 32286 33005 . + . ID=gene-AAX15_08145;Name=AAX15_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08145 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 32286 33005 . + 0 ID=cds-KKZ53082.1;Parent=gene-AAX15_08145;Dbxref=NCBI_GP:KKZ53082.1;Name=KKZ53082.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625742.1;locus_tag=AAX15_08145;product=arginine ABC transporter substrate-binding protein;protein_id=KKZ53082.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 33009 33674 . + . ID=gene-AAX15_08150;Name=AAX15_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08150 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 33009 33674 . + 0 ID=cds-KKZ53083.1;Parent=gene-AAX15_08150;Dbxref=NCBI_GP:KKZ53083.1;Name=KKZ53083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766862.1;locus_tag=AAX15_08150;product=ABC transporter;protein_id=KKZ53083.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 33674 34357 . + . ID=gene-AAX15_08155;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AAX15_08155 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 33674 34357 . + 0 ID=cds-KKZ53084.1;Parent=gene-AAX15_08155;Dbxref=NCBI_GP:KKZ53084.1;Name=KKZ53084.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646282.1;locus_tag=AAX15_08155;product=arginine transporter permease subunit ArtM;protein_id=KKZ53084.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 34590 35102 . - . ID=gene-AAX15_08160;Name=AAX15_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08160 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 34590 35102 . - 0 ID=cds-KKZ53085.1;Parent=gene-AAX15_08160;Dbxref=NCBI_GP:KKZ53085.1;Name=KKZ53085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702101.1;locus_tag=AAX15_08160;product=protein opa;protein_id=KKZ53085.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 35153 35668 . - . ID=gene-AAX15_08165;Name=AAX15_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08165 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 35153 35668 . - 0 ID=cds-KKZ53086.1;Parent=gene-AAX15_08165;Dbxref=NCBI_GP:KKZ53086.1;Name=KKZ53086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646373.1;locus_tag=AAX15_08165;product=sprT;protein_id=KKZ53086.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 35733 36887 . - . ID=gene-AAX15_08170;Name=AAX15_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08170 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 35733 36887 . - 0 ID=cds-KKZ53087.1;Parent=gene-AAX15_08170;Dbxref=NCBI_GP:KKZ53087.1;Name=KKZ53087.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356717.1;locus_tag=AAX15_08170;product=S-adenosylmethionine synthetase;protein_id=KKZ53087.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 36971 37552 . - . ID=gene-AAX15_08175;Name=AAX15_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08175 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 36971 37552 . - 0 ID=cds-KKZ53088.1;Parent=gene-AAX15_08175;Dbxref=NCBI_GP:KKZ53088.1;Name=KKZ53088.1;Note=catalyzes the formation of anthranilate from chorismate and glutamine%3B functions in tryptophan biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766857.1;locus_tag=AAX15_08175;product=anthranilate synthase component II;protein_id=KKZ53088.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 37594 38580 . + . ID=gene-AAX15_08180;Name=AAX15_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08180 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 37594 38580 . + 0 ID=cds-KKZ53089.1;Parent=gene-AAX15_08180;Dbxref=NCBI_GP:KKZ53089.1;Name=KKZ53089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627229.1;locus_tag=AAX15_08180;product=aminobenzoate synthetase;protein_id=KKZ53089.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 38580 39146 . + . ID=gene-AAX15_08185;Name=AAX15_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08185 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 38580 39146 . + 0 ID=cds-KKZ53090.1;Parent=gene-AAX15_08185;Dbxref=NCBI_GP:KKZ53090.1;Name=KKZ53090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686486.1;locus_tag=AAX15_08185;product=hypothetical protein;protein_id=KKZ53090.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 39186 39530 . - . ID=gene-AAX15_08190;Name=AAX15_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08190 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 39186 39530 . - 0 ID=cds-KKZ53091.1;Parent=gene-AAX15_08190;Dbxref=NCBI_GP:KKZ53091.1;Name=KKZ53091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634976.1;locus_tag=AAX15_08190;product=hypothetical protein;protein_id=KKZ53091.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 39717 40805 . + . ID=gene-AAX15_08195;Name=AAX15_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08195 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 39717 40805 . + 0 ID=cds-KKZ53092.1;Parent=gene-AAX15_08195;Dbxref=NCBI_GP:KKZ53092.1;Name=KKZ53092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702096.1;locus_tag=AAX15_08195;product=MFS transporter;protein_id=KKZ53092.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 40895 41995 . + . ID=gene-AAX15_08200;Name=AAX15_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08200 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 40895 41995 . + 0 ID=cds-KKZ53093.1;Parent=gene-AAX15_08200;Dbxref=NCBI_GP:KKZ53093.1;Name=KKZ53093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646406.1;locus_tag=AAX15_08200;product=aspartate aminotransferase;protein_id=KKZ53093.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 42067 42390 . - . ID=gene-AAX15_08205;Name=AAX15_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08205 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 42067 42390 . - 0 ID=cds-KKZ53094.1;Parent=gene-AAX15_08205;Dbxref=NCBI_GP:KKZ53094.1;Name=KKZ53094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627223.1;locus_tag=AAX15_08205;product=glutaredoxin;protein_id=KKZ53094.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 42541 43620 . - . ID=gene-AAX15_08210;Name=AAX15_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08210 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 42541 43620 . - 0 ID=cds-KKZ53095.1;Parent=gene-AAX15_08210;Dbxref=NCBI_GP:KKZ53095.1;Name=KKZ53095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627222.1;locus_tag=AAX15_08210;product=membrane protein;protein_id=KKZ53095.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 43999 47082 . + . ID=gene-AAX15_08215;Name=AAX15_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08215 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 43999 47082 . + 0 ID=cds-KKZ53096.1;Parent=gene-AAX15_08215;Dbxref=NCBI_GP:KKZ53096.1;Name=KKZ53096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630418.1;locus_tag=AAX15_08215;product=membrane protein;protein_id=KKZ53096.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 47097 47513 . + . ID=gene-AAX15_08220;Name=AAX15_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08220 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 47097 47513 . + 0 ID=cds-KKZ53097.1;Parent=gene-AAX15_08220;Dbxref=NCBI_GP:KKZ53097.1;Name=KKZ53097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272416.1;locus_tag=AAX15_08220;product=esterase;protein_id=KKZ53097.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 47510 48481 . + . ID=gene-AAX15_08225;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AAX15_08225 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 47510 48481 . + 0 ID=cds-KKZ53098.1;Parent=gene-AAX15_08225;Dbxref=NCBI_GP:KKZ53098.1;Name=KKZ53098.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996518.1;locus_tag=AAX15_08225;product=ferrochelatase;protein_id=KKZ53098.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 48560 49417 . + . ID=gene-AAX15_08230;Name=AAX15_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08230 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 48560 49417 . + 0 ID=cds-KKZ53099.1;Parent=gene-AAX15_08230;Dbxref=NCBI_GP:KKZ53099.1;Name=KKZ53099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702090.1;locus_tag=AAX15_08230;product=hypothetical protein;protein_id=KKZ53099.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 49527 50483 . + . ID=gene-AAX15_08235;Name=AAX15_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08235 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 49527 50483 . + 0 ID=cds-KKZ53100.1;Parent=gene-AAX15_08235;Dbxref=NCBI_GP:KKZ53100.1;Name=KKZ53100.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526052.1;locus_tag=AAX15_08235;product=thioredoxin reductase;protein_id=KKZ53100.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 50545 52305 . + . ID=gene-AAX15_08240;Name=AAX15_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08240 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 50545 52305 . + 0 ID=cds-KKZ53101.1;Parent=gene-AAX15_08240;Dbxref=NCBI_GP:KKZ53101.1;Name=KKZ53101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054470.1;locus_tag=AAX15_08240;product=cysteine ABC transporter ATP-binding protein;protein_id=KKZ53101.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 52305 54035 . + . ID=gene-AAX15_08245;Name=AAX15_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08245 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 52305 54035 . + 0 ID=cds-KKZ53102.1;Parent=gene-AAX15_08245;Dbxref=NCBI_GP:KKZ53102.1;Name=KKZ53102.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702088.1;locus_tag=AAX15_08245;product=amino acid ABC transporter permease;protein_id=KKZ53102.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 54287 54754 . + . ID=gene-AAX15_08250;Name=AAX15_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08250 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 54287 54754 . + 0 ID=cds-KKZ53103.1;Parent=gene-AAX15_08250;Dbxref=NCBI_GP:KKZ53103.1;Name=KKZ53103.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272410.1;locus_tag=AAX15_08250;product=ribonucleoside-triphosphate reductase;protein_id=KKZ53103.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 54811 55350 . - . ID=gene-AAX15_08255;Name=AAX15_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08255 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 54811 55350 . - 0 ID=cds-KKZ53104.1;Parent=gene-AAX15_08255;Dbxref=NCBI_GP:KKZ53104.1;Name=KKZ53104.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661327.1;locus_tag=AAX15_08255;product=hypoxanthine phosphoribosyltransferase;protein_id=KKZ53104.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 55563 56918 . - . ID=gene-AAX15_08260;Name=AAX15_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08260 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 55563 56918 . - 0 ID=cds-KKZ53105.1;Parent=gene-AAX15_08260;Dbxref=NCBI_GP:KKZ53105.1;Name=KKZ53105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638255.1;locus_tag=AAX15_08260;product=protein PmbA;protein_id=KKZ53105.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 57007 57543 . + . ID=gene-AAX15_08265;Name=AAX15_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08265 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 57007 57543 . + 0 ID=cds-KKZ53106.1;Parent=gene-AAX15_08265;Dbxref=NCBI_GP:KKZ53106.1;Name=KKZ53106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702084.1;locus_tag=AAX15_08265;product=hypothetical protein;protein_id=KKZ53106.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 57549 58157 . + . ID=gene-AAX15_08270;Name=AAX15_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08270 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 57549 58157 . + 0 ID=cds-KKZ53107.1;Parent=gene-AAX15_08270;Dbxref=NCBI_GP:KKZ53107.1;Name=KKZ53107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635000.1;locus_tag=AAX15_08270;product=sugar transporter;protein_id=KKZ53107.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 58138 58656 . + . ID=gene-AAX15_08275;Name=AAX15_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08275 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 58138 58656 . + 0 ID=cds-KKZ53108.1;Parent=gene-AAX15_08275;Dbxref=NCBI_GP:KKZ53108.1;Name=KKZ53108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45074.1;locus_tag=AAX15_08275;product=ABC transporter substrate-binding protein;protein_id=KKZ53108.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 58660 59385 . + . ID=gene-AAX15_08280;Name=AAX15_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08280 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 58660 59385 . + 0 ID=cds-KKZ53109.1;Parent=gene-AAX15_08280;Dbxref=NCBI_GP:KKZ53109.1;Name=KKZ53109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45073.1;locus_tag=AAX15_08280;product=sugar ABC transporter ATP-binding protein;protein_id=KKZ53109.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 59388 59882 . + . ID=gene-AAX15_08285;Name=AAX15_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08285 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 59388 59882 . + 0 ID=cds-KKZ53110.1;Parent=gene-AAX15_08285;Dbxref=NCBI_GP:KKZ53110.1;Name=KKZ53110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646278.1;locus_tag=AAX15_08285;product=phosphotransferase;protein_id=KKZ53110.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 59898 60755 . + . ID=gene-AAX15_08290;Name=AAX15_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08290 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 59898 60755 . + 0 ID=cds-KKZ53111.1;Parent=gene-AAX15_08290;Dbxref=NCBI_GP:KKZ53111.1;Name=KKZ53111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646269.1;locus_tag=AAX15_08290;product=glmZ(sRNA)-inactivating NTPase;protein_id=KKZ53111.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 60795 61952 . - . ID=gene-AAX15_08295;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AAX15_08295 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 60795 61952 . - 0 ID=cds-KKZ53112.1;Parent=gene-AAX15_08295;Dbxref=NCBI_GP:KKZ53112.1;Name=KKZ53112.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630368.1;locus_tag=AAX15_08295;product=chorismate mutase;protein_id=KKZ53112.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 62078 62995 . - . ID=gene-AAX15_08300;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AAX15_08300 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 62078 62995 . - 0 ID=cds-KKZ53113.1;Parent=gene-AAX15_08300;Dbxref=NCBI_GP:KKZ53113.1;Name=KKZ53113.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPA5.1;locus_tag=AAX15_08300;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=KKZ53113.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 63039 64301 . - . ID=gene-AAX15_08305;Name=AAX15_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08305 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 63039 64301 . - 0 ID=cds-KKZ53114.1;Parent=gene-AAX15_08305;Dbxref=NCBI_GP:KKZ53114.1;Name=KKZ53114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766835.1;locus_tag=AAX15_08305;product=cell division protein FtsZ;protein_id=KKZ53114.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 64383 65660 . - . ID=gene-AAX15_08310;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AAX15_08310 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 64383 65660 . - 0 ID=cds-KKZ53115.1;Parent=gene-AAX15_08310;Dbxref=NCBI_GP:KKZ53115.1;Name=KKZ53115.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651835.1;locus_tag=AAX15_08310;product=cell division protein FtsA;protein_id=KKZ53115.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 65676 66440 . - . ID=gene-AAX15_08315;Name=AAX15_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08315 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 65676 66440 . - 0 ID=cds-KKZ53116.1;Parent=gene-AAX15_08315;Dbxref=NCBI_GP:KKZ53116.1;Name=KKZ53116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766833.1;locus_tag=AAX15_08315;product=cell division protein FtsQ;protein_id=KKZ53116.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 66440 67360 . - . ID=gene-AAX15_08320;Name=AAX15_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08320 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 66440 67360 . - 0 ID=cds-KKZ53117.1;Parent=gene-AAX15_08320;Dbxref=NCBI_GP:KKZ53117.1;Name=KKZ53117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646444.1;locus_tag=AAX15_08320;product=D-alanine--D-alanine ligase;protein_id=KKZ53117.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 67446 68873 . - . ID=gene-AAX15_08325;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AAX15_08325 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 67446 68873 . - 0 ID=cds-KKZ53118.1;Parent=gene-AAX15_08325;Dbxref=NCBI_GP:KKZ53118.1;Name=KKZ53118.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527829.1;locus_tag=AAX15_08325;product=UDP-N-acetylmuramate--alanine ligase;protein_id=KKZ53118.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 68970 70025 . - . ID=gene-AAX15_08330;Name=AAX15_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08330 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 68970 70025 . - 0 ID=cds-KKZ53119.1;Parent=gene-AAX15_08330;Dbxref=NCBI_GP:KKZ53119.1;Name=KKZ53119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643565.1;locus_tag=AAX15_08330;product=UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP acetylglucosamine transferase;protein_id=KKZ53119.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 70037 71221 . - . ID=gene-AAX15_08335;Name=AAX15_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08335 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 70037 71221 . - 0 ID=cds-KKZ53120.1;Parent=gene-AAX15_08335;Dbxref=NCBI_GP:KKZ53120.1;Name=KKZ53120.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646358.1;locus_tag=AAX15_08335;product=cell division protein FtsW;protein_id=KKZ53120.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 71244 72557 . - . ID=gene-AAX15_08340;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AAX15_08340 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 71244 72557 . - 0 ID=cds-KKZ53121.1;Parent=gene-AAX15_08340;Dbxref=NCBI_GP:KKZ53121.1;Name=KKZ53121.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766828.1;locus_tag=AAX15_08340;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=KKZ53121.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 72681 73763 . - . ID=gene-AAX15_08345;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AAX15_08345 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 72681 73763 . - 0 ID=cds-KKZ53122.1;Parent=gene-AAX15_08345;Dbxref=NCBI_GP:KKZ53122.1;Name=KKZ53122.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLG1.1;locus_tag=AAX15_08345;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=KKZ53122.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 73757 75130 . - . ID=gene-AAX15_08350;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AAX15_08350 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 73757 75130 . - 0 ID=cds-KKZ53123.1;Parent=gene-AAX15_08350;Dbxref=NCBI_GP:KKZ53123.1;Name=KKZ53123.1;gbkey=CDS;gene=murF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628286.1;locus_tag=AAX15_08350;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=KKZ53123.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 75149 76615 . - . ID=gene-AAX15_08355;Name=AAX15_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08355 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 75149 76615 . - 0 ID=cds-KKZ53124.1;Parent=gene-AAX15_08355;Dbxref=NCBI_GP:KKZ53124.1;Name=KKZ53124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637657.1;locus_tag=AAX15_08355;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=KKZ53124.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 76625 78457 . - . ID=gene-AAX15_08360;Name=AAX15_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08360 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 76625 78457 . - 0 ID=cds-KKZ53125.1;Parent=gene-AAX15_08360;Dbxref=NCBI_GP:KKZ53125.1;Name=KKZ53125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527834.1;locus_tag=AAX15_08360;product=peptidoglycan synthase;protein_id=KKZ53125.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 78470 78793 . - . ID=gene-AAX15_08365;Name=AAX15_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08365 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 78470 78793 . - 0 ID=cds-KKZ53126.1;Parent=gene-AAX15_08365;Dbxref=NCBI_GP:KKZ53126.1;Name=KKZ53126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643553.1;locus_tag=AAX15_08365;product=cell division protein FtsL;protein_id=KKZ53126.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 78796 79761 . - . ID=gene-AAX15_08370;Name=AAX15_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08370 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 78796 79761 . - 0 ID=cds-KKZ53127.1;Parent=gene-AAX15_08370;Dbxref=NCBI_GP:KKZ53127.1;Name=KKZ53127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646431.1;locus_tag=AAX15_08370;product=16S rRNA methyltransferase;protein_id=KKZ53127.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 79799 80254 . - . ID=gene-AAX15_08375;Name=AAX15_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08375 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 79799 80254 . - 0 ID=cds-KKZ53128.1;Parent=gene-AAX15_08375;Dbxref=NCBI_GP:KKZ53128.1;Name=KKZ53128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550931.1;locus_tag=AAX15_08375;product=cell division protein MraZ;protein_id=KKZ53128.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 80460 82046 . - . ID=gene-AAX15_08380;Name=AAX15_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08380 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 80460 82046 . - 0 ID=cds-KKZ53129.1;Parent=gene-AAX15_08380;Dbxref=NCBI_GP:KKZ53129.1;Name=KKZ53129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635024.1;locus_tag=AAX15_08380;product=carbon starvation protein CstA;protein_id=KKZ53129.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 82245 82478 . + . ID=gene-AAX15_08385;Name=AAX15_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08385 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 82245 82478 . + 0 ID=cds-KKZ53130.1;Parent=gene-AAX15_08385;Dbxref=NCBI_GP:KKZ53130.1;Name=KKZ53130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646381.1;locus_tag=AAX15_08385;product=membrane protein;protein_id=KKZ53130.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 82515 83327 . - . ID=gene-AAX15_08390;Name=AAX15_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08390 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 82515 83327 . - 0 ID=cds-KKZ53131.1;Parent=gene-AAX15_08390;Dbxref=NCBI_GP:KKZ53131.1;Name=KKZ53131.1;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643545.1;locus_tag=AAX15_08390;product=formate dehydrogenase;protein_id=KKZ53131.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 83603 84214 . + . ID=gene-AAX15_08395;Name=AAX15_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08395 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 83603 84214 . + 0 ID=cds-KKZ53132.1;Parent=gene-AAX15_08395;Dbxref=NCBI_GP:KKZ53132.1;Name=KKZ53132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649891.1;locus_tag=AAX15_08395;product=sulfate ABC transporter substrate-binding protein;protein_id=KKZ53132.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 84263 86686 . + . ID=gene-AAX15_08400;Name=AAX15_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08400 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 84263 86686 . + 0 ID=cds-KKZ53133.1;Parent=gene-AAX15_08400;Dbxref=NCBI_GP:KKZ53133.1;Name=KKZ53133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550636.1;locus_tag=AAX15_08400;product=hypothetical protein;protein_id=KKZ53133.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 86688 87620 . + . ID=gene-AAX15_08405;Name=AAX15_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08405 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 86688 87620 . + 0 ID=cds-KKZ53134.1;Parent=gene-AAX15_08405;Dbxref=NCBI_GP:KKZ53134.1;Name=KKZ53134.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628716.1;locus_tag=AAX15_08405;product=formate dehydrogenase;protein_id=KKZ53134.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 87613 88329 . + . ID=gene-AAX15_08410;Name=AAX15_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08410 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 87613 88329 . + 0 ID=cds-KKZ53135.1;Parent=gene-AAX15_08410;Dbxref=NCBI_GP:KKZ53135.1;Name=KKZ53135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671679.1;locus_tag=AAX15_08410;product=formate dehydrogenase;protein_id=KKZ53135.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 88403 89311 . + . ID=gene-AAX15_08415;Name=AAX15_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08415 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 88403 89311 . + 0 ID=cds-KKZ53136.1;Parent=gene-AAX15_08415;Dbxref=NCBI_GP:KKZ53136.1;Name=KKZ53136.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635032.1;locus_tag=AAX15_08415;product=formate dehydrogenase;protein_id=KKZ53136.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 89357 89797 . - . ID=gene-AAX15_08420;Name=AAX15_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08420 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 89357 89797 . - 0 ID=cds-KKZ53137.1;Parent=gene-AAX15_08420;Dbxref=NCBI_GP:KKZ53137.1;Name=KKZ53137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660712.1;locus_tag=AAX15_08420;product=alanine acetyltransferase;protein_id=KKZ53137.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 89800 90204 . - . ID=gene-AAX15_08425;Name=AAX15_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08425 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 89800 90204 . - 0 ID=cds-KKZ53138.1;Parent=gene-AAX15_08425;Dbxref=NCBI_GP:KKZ53138.1;Name=KKZ53138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550633.1;locus_tag=AAX15_08425;product=DNA polymerase III subunit psi;protein_id=KKZ53138.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 90206 90793 . - . ID=gene-AAX15_08430;Name=AAX15_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08430 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 90206 90793 . - 0 ID=cds-KKZ53139.1;Parent=gene-AAX15_08430;Dbxref=NCBI_GP:KKZ53139.1;Name=KKZ53139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635035.1;locus_tag=AAX15_08430;product=hypothetical protein;protein_id=KKZ53139.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 90889 91881 . + . ID=gene-AAX15_08435;Name=AAX15_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08435 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 90889 91881 . + 0 ID=cds-KKZ53140.1;Parent=gene-AAX15_08435;Dbxref=NCBI_GP:KKZ53140.1;Name=KKZ53140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635036.1;locus_tag=AAX15_08435;product=MFS transporter;protein_id=KKZ53140.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 91948 92856 . - . ID=gene-AAX15_08440;Name=AAX15_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08440 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 91948 92856 . - 0 ID=cds-KKZ53141.1;Parent=gene-AAX15_08440;Dbxref=NCBI_GP:KKZ53141.1;Name=KKZ53141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525392.1;locus_tag=AAX15_08440;product=GTPase Era;protein_id=KKZ53141.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 92853 93536 . - . ID=gene-AAX15_08445;Name=AAX15_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08445 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 92853 93536 . - 0 ID=cds-KKZ53142.1;Parent=gene-AAX15_08445;Dbxref=NCBI_GP:KKZ53142.1;Name=KKZ53142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357168.1;locus_tag=AAX15_08445;product=double-stranded RNA-binding protein;protein_id=KKZ53142.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 93538 94587 . - . ID=gene-AAX15_08450;Name=AAX15_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08450 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 93538 94587 . - 0 ID=cds-KKZ53143.1;Parent=gene-AAX15_08450;Dbxref=NCBI_GP:KKZ53143.1;Name=KKZ53143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639603.1;locus_tag=AAX15_08450;product=signal peptidase;protein_id=KKZ53143.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 94596 96392 . - . ID=gene-AAX15_08455;Name=AAX15_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08455 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 94596 96392 . - 0 ID=cds-KKZ53144.1;Parent=gene-AAX15_08455;Dbxref=NCBI_GP:KKZ53144.1;Name=KKZ53144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357170.1;locus_tag=AAX15_08455;product=elongation factor 4;protein_id=KKZ53144.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 96561 96944 . - . ID=gene-AAX15_08460;Name=AAX15_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08460 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 96561 96944 . - 0 ID=cds-KKZ53145.1;Parent=gene-AAX15_08460;Dbxref=NCBI_GP:KKZ53145.1;Name=KKZ53145.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPH6.1;locus_tag=AAX15_08460;product=autonomous glycyl radical cofactor GrcA;protein_id=KKZ53145.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 97212 97871 . + . ID=gene-AAX15_08465;Name=AAX15_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08465 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 97212 97871 . + 0 ID=cds-KKZ53146.1;Parent=gene-AAX15_08465;Dbxref=NCBI_GP:KKZ53146.1;Name=KKZ53146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525400.1;locus_tag=AAX15_08465;product=uracil-DNA glycosylase;protein_id=KKZ53146.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 97940 99364 . - . ID=gene-AAX15_08470;Name=AAX15_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08470 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 97940 99364 . - 0 ID=cds-KKZ53147.1;Parent=gene-AAX15_08470;Dbxref=NCBI_GP:KKZ53147.1;Name=KKZ53147.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550626.1;locus_tag=AAX15_08470;product=(dimethylallyl)adenosine tRNA methylthiotransferase;protein_id=KKZ53147.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 99533 100495 . - . ID=gene-AAX15_08475;Name=AAX15_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08475 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 99533 100495 . - 0 ID=cds-KKZ53148.1;Parent=gene-AAX15_08475;Dbxref=NCBI_GP:KKZ53148.1;Name=KKZ53148.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663288.1;locus_tag=AAX15_08475;product=lipoyl synthase;protein_id=KKZ53148.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 100547 101185 . - . ID=gene-AAX15_08480;Name=AAX15_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08480 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 100547 101185 . - 0 ID=cds-KKZ53149.1;Parent=gene-AAX15_08480;Dbxref=NCBI_GP:KKZ53149.1;Name=KKZ53149.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766806.1;locus_tag=AAX15_08480;product=lipoate--protein ligase;protein_id=KKZ53149.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 101187 101465 . - . ID=gene-AAX15_08485;Name=AAX15_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08485 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 101187 101465 . - 0 ID=cds-KKZ53150.1;Parent=gene-AAX15_08485;Dbxref=NCBI_GP:KKZ53150.1;Name=KKZ53150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44465.1;locus_tag=AAX15_08485;product=hypothetical protein;protein_id=KKZ53150.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 101569 102750 . - . ID=gene-AAX15_08490;Name=AAX15_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08490 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 101569 102750 . - 0 ID=cds-KKZ53151.1;Parent=gene-AAX15_08490;Dbxref=NCBI_GP:KKZ53151.1;Name=KKZ53151.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766805.1;locus_tag=AAX15_08490;product=D-alanyl-D-alanine carboxypeptidase;protein_id=KKZ53151.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 102766 103626 . - . ID=gene-AAX15_08495;Name=AAX15_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08495 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 102766 103626 . - 0 ID=cds-KKZ53152.1;Parent=gene-AAX15_08495;Dbxref=NCBI_GP:KKZ53152.1;Name=KKZ53152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766804.1;locus_tag=AAX15_08495;product=RlpA;protein_id=KKZ53152.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 103679 104794 . - . ID=gene-AAX15_08500;Name=AAX15_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08500 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 103679 104794 . - 0 ID=cds-KKZ53153.1;Parent=gene-AAX15_08500;Dbxref=NCBI_GP:KKZ53153.1;Name=KKZ53153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628767.1;locus_tag=AAX15_08500;product=cell wall shape-determining protein;protein_id=KKZ53153.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 104784 106739 . - . ID=gene-AAX15_08505;Name=AAX15_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08505 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 104784 106739 . - 0 ID=cds-KKZ53154.1;Parent=gene-AAX15_08505;Dbxref=NCBI_GP:KKZ53154.1;Name=KKZ53154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326527.1;locus_tag=AAX15_08505;product=penicillin-binding protein 2;protein_id=KKZ53154.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 106761 107228 . - . ID=gene-AAX15_08510;Name=AAX15_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08510 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 106761 107228 . - 0 ID=cds-KKZ53155.1;Parent=gene-AAX15_08510;Dbxref=NCBI_GP:KKZ53155.1;Name=KKZ53155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639560.1;locus_tag=AAX15_08510;product=50S rRNA methyltransferase;protein_id=KKZ53155.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 107281 107589 . - . ID=gene-AAX15_08515;Name=AAX15_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08515 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 107281 107589 . - 0 ID=cds-KKZ53156.1;Parent=gene-AAX15_08515;Dbxref=NCBI_GP:KKZ53156.1;Name=KKZ53156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652613.1;locus_tag=AAX15_08515;product=ribosome-associated protein IOJAP;protein_id=KKZ53156.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 107715 109370 . - . ID=gene-AAX15_08520;Name=AAX15_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08520 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 107715 109370 . - 0 ID=cds-KKZ53157.1;Parent=gene-AAX15_08520;Dbxref=NCBI_GP:KKZ53157.1;Name=KKZ53157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550621.1;locus_tag=AAX15_08520;product=transporter;protein_id=KKZ53157.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 109576 111354 . + . ID=gene-AAX15_08525;Name=AAX15_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08525 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 109576 111354 . + 0 ID=cds-KKZ53158.1;Parent=gene-AAX15_08525;Dbxref=NCBI_GP:KKZ53158.1;Name=KKZ53158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766798.1;locus_tag=AAX15_08525;product=ABC transporter ATP-binding protein;protein_id=KKZ53158.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 111489 112544 . + . ID=gene-AAX15_08530;Name=AAX15_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08530 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 111489 112544 . + 0 ID=cds-KKZ53159.1;Parent=gene-AAX15_08530;Dbxref=NCBI_GP:KKZ53159.1;Name=KKZ53159.1;Note=functions in MreBCD complex in some organisms;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630272.1;locus_tag=AAX15_08530;product=rod shape-determining protein MreB;protein_id=KKZ53159.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 112625 113680 . + . ID=gene-AAX15_08535;Name=AAX15_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08535 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 112625 113680 . + 0 ID=cds-KKZ53160.1;Parent=gene-AAX15_08535;Dbxref=NCBI_GP:KKZ53160.1;Name=KKZ53160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646265.1;locus_tag=AAX15_08535;product=rod shape-determining protein MreC;protein_id=KKZ53160.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 113680 114168 . + . ID=gene-AAX15_08540;Name=AAX15_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08540 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 113680 114168 . + 0 ID=cds-KKZ53161.1;Parent=gene-AAX15_08540;Dbxref=NCBI_GP:KKZ53161.1;Name=KKZ53161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639550.1;locus_tag=AAX15_08540;product=rod shape-determining protein MreD;protein_id=KKZ53161.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 114220 114996 . - . ID=gene-AAX15_08545;Name=AAX15_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08545 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 114220 114996 . - 0 ID=cds-KKZ53162.1;Parent=gene-AAX15_08545;Dbxref=NCBI_GP:KKZ53162.1;Name=KKZ53162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766796.1;locus_tag=AAX15_08545;product=hypothetical protein;protein_id=KKZ53162.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 115006 115809 . - . ID=gene-AAX15_08550;Name=AAX15_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08550 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 115006 115809 . - 0 ID=cds-KKZ53163.1;Parent=gene-AAX15_08550;Dbxref=NCBI_GP:KKZ53163.1;Name=KKZ53163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356007.1;locus_tag=AAX15_08550;product=exodeoxyribonuclease III;protein_id=KKZ53163.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 115857 116531 . - . ID=gene-AAX15_08555;Name=AAX15_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08555 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 115857 116531 . - 0 ID=cds-KKZ53164.1;Parent=gene-AAX15_08555;Dbxref=NCBI_GP:KKZ53164.1;Name=KKZ53164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628037.1;locus_tag=AAX15_08555;product=pseudouridine synthase;protein_id=KKZ53164.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 116531 117595 . - . ID=gene-AAX15_08560;Name=AAX15_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08560 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 116531 117595 . - 0 ID=cds-KKZ53165.1;Parent=gene-AAX15_08560;Dbxref=NCBI_GP:KKZ53165.1;Name=KKZ53165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766793.1;locus_tag=AAX15_08560;product=membrane protein;protein_id=KKZ53165.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 117655 118317 . - . ID=gene-AAX15_08565;Name=AAX15_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08565 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 117655 118317 . - 0 ID=cds-KKZ53166.1;Parent=gene-AAX15_08565;Dbxref=NCBI_GP:KKZ53166.1;Name=KKZ53166.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628031.1;locus_tag=AAX15_08565;product=membrane protein;protein_id=KKZ53166.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 118498 118587 . + . ID=gene-AAX15_08570;Name=AAX15_08570;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_08570 GCA_001008275.1|LCTH01000057.1 tRNAscan-SE tRNA 118498 118587 . + . ID=rna-AAX15_08570;Parent=gene-AAX15_08570;anticodon=(pos:118532..118534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_08570;product=tRNA-Ser GCA_001008275.1|LCTH01000057.1 tRNAscan-SE exon 118498 118587 . + . ID=exon-AAX15_08570-1;Parent=rna-AAX15_08570;anticodon=(pos:118532..118534);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_08570;product=tRNA-Ser GCA_001008275.1|LCTH01000057.1 Genbank gene 118644 119198 . - . ID=gene-AAX15_08575;Name=AAX15_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08575 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 118644 119198 . - 0 ID=cds-KKZ53167.1;Parent=gene-AAX15_08575;Dbxref=NCBI_GP:KKZ53167.1;Name=KKZ53167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639544.1;locus_tag=AAX15_08575;product=hypothetical protein;protein_id=KKZ53167.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 119302 119628 . + . ID=gene-AAX15_08580;Name=AAX15_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08580 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 119302 119628 . + 0 ID=cds-KKZ53168.1;Parent=gene-AAX15_08580;Dbxref=NCBI_GP:KKZ53168.1;Name=KKZ53168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628024.1;locus_tag=AAX15_08580;product=hypothetical protein;protein_id=KKZ53168.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 119665 120378 . - . ID=gene-AAX15_08585;Name=AAX15_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08585 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 119665 120378 . - 0 ID=cds-KKZ53169.1;Parent=gene-AAX15_08585;Dbxref=NCBI_GP:KKZ53169.1;Name=KKZ53169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637559.1;locus_tag=AAX15_08585;product=membrane protein;protein_id=KKZ53169.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 120476 122305 . - . ID=gene-AAX15_08590;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AAX15_08590 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 120476 122305 . - 0 ID=cds-KKZ53170.1;Parent=gene-AAX15_08590;Dbxref=NCBI_GP:KKZ53170.1;Name=KKZ53170.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550614.1;locus_tag=AAX15_08590;product=excinuclease ABC subunit C;protein_id=KKZ53170.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 122307 123071 . - . ID=gene-AAX15_08595;Name=AAX15_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08595 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 122307 123071 . - 0 ID=cds-KKZ53171.1;Parent=gene-AAX15_08595;Dbxref=NCBI_GP:KKZ53171.1;Name=KKZ53171.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766777.1;locus_tag=AAX15_08595;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=KKZ53171.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 123075 123260 . - . ID=gene-AAX15_08600;Name=AAX15_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08600 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 123075 123260 . - 0 ID=cds-KKZ53172.1;Parent=gene-AAX15_08600;Dbxref=NCBI_GP:KKZ53172.1;Name=KKZ53172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627998.1;locus_tag=AAX15_08600;product=hypothetical protein;protein_id=KKZ53172.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 123253 124251 . - . ID=gene-AAX15_08605;Name=AAX15_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08605 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 123253 124251 . - 0 ID=cds-KKZ53173.1;Parent=gene-AAX15_08605;Dbxref=NCBI_GP:KKZ53173.1;Name=KKZ53173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627996.1;locus_tag=AAX15_08605;product=tetraacyldisaccharide 4'-kinase;protein_id=KKZ53173.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 124324 126087 . - . ID=gene-AAX15_08610;Name=AAX15_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08610 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 124324 126087 . - 0 ID=cds-KKZ53174.1;Parent=gene-AAX15_08610;Dbxref=NCBI_GP:KKZ53174.1;Name=KKZ53174.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630223.1;locus_tag=AAX15_08610;product=lipid transporter ATP-binding/permease;protein_id=KKZ53174.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 126128 128494 . - . ID=gene-AAX15_08615;Name=AAX15_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08615 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 126128 128494 . - 0 ID=cds-KKZ53175.1;Parent=gene-AAX15_08615;Dbxref=NCBI_GP:KKZ53175.1;Name=KKZ53175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635443.1;locus_tag=AAX15_08615;product=recombinase;protein_id=KKZ53175.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 128754 129191 . + . ID=gene-AAX15_08620;Name=AAX15_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08620 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 128754 129191 . + 0 ID=cds-KKZ53176.1;Parent=gene-AAX15_08620;Dbxref=NCBI_GP:KKZ53176.1;Name=KKZ53176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766772.1;locus_tag=AAX15_08620;product=molecular chaperone DnaK;protein_id=KKZ53176.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 129439 130797 . + . ID=gene-AAX15_08625;Name=AAX15_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08625 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 129439 130797 . + 0 ID=cds-KKZ53195.1;Parent=gene-AAX15_08625;Dbxref=NCBI_GP:KKZ53195.1;Name=KKZ53195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630217.1;locus_tag=AAX15_08625;product=poly(A) polymerase;protein_id=KKZ53195.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 130806 131288 . + . ID=gene-AAX15_08630;Name=AAX15_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08630 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 130806 131288 . + 0 ID=cds-KKZ53177.1;Parent=gene-AAX15_08630;Dbxref=NCBI_GP:KKZ53177.1;Name=KKZ53177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630215.1;locus_tag=AAX15_08630;product=7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase;protein_id=KKZ53177.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 131364 131840 . + . ID=gene-AAX15_08635;Name=AAX15_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08635 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 131364 131840 . + 0 ID=cds-KKZ53178.1;Parent=gene-AAX15_08635;Dbxref=NCBI_GP:KKZ53178.1;Name=KKZ53178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627897.1;locus_tag=AAX15_08635;product=ATP-binding protein;protein_id=KKZ53178.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 131848 133218 . + . ID=gene-AAX15_08640;Name=AAX15_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08640 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 131848 133218 . + 0 ID=cds-KKZ53179.1;Parent=gene-AAX15_08640;Dbxref=NCBI_GP:KKZ53179.1;Name=KKZ53179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646051.1;locus_tag=AAX15_08640;product=N-acetylmuramoyl-L-alanine amidase;protein_id=KKZ53179.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 133219 135108 . + . ID=gene-AAX15_08645;Name=AAX15_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08645 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 133219 135108 . + 0 ID=cds-KKZ53180.1;Parent=gene-AAX15_08645;Dbxref=NCBI_GP:KKZ53180.1;Name=KKZ53180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643465.1;locus_tag=AAX15_08645;product=DNA mismatch repair protein MutL;protein_id=KKZ53180.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 135116 136051 . + . ID=gene-AAX15_08650;Name=AAX15_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08650 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 135116 136051 . + 0 ID=cds-KKZ53181.1;Parent=gene-AAX15_08650;Dbxref=NCBI_GP:KKZ53181.1;Name=KKZ53181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH6.1;locus_tag=AAX15_08650;product=tRNA dimethylallyltransferase;protein_id=KKZ53181.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 136057 139002 . + . ID=gene-AAX15_08655;Name=AAX15_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08655 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 136057 139002 . + 0 ID=cds-KKZ53182.1;Parent=gene-AAX15_08655;Dbxref=NCBI_GP:KKZ53182.1;Name=KKZ53182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646084.1;locus_tag=AAX15_08655;product=glutamine-synthetase adenylyltransferase;protein_id=KKZ53182.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 139024 140700 . - . ID=gene-AAX15_08660;Name=AAX15_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08660 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 139024 140700 . - 0 ID=cds-KKZ53183.1;Parent=gene-AAX15_08660;Dbxref=NCBI_GP:KKZ53183.1;Name=KKZ53183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646040.1;locus_tag=AAX15_08660;product=recombination and repair protein;protein_id=KKZ53183.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 140812 141702 . - . ID=gene-AAX15_08665;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AAX15_08665 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 140812 141702 . - 0 ID=cds-KKZ53196.1;Parent=gene-AAX15_08665;Dbxref=NCBI_GP:KKZ53196.1;Name=KKZ53196.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627914.1;locus_tag=AAX15_08665;product=inorganic polyphosphate kinase;protein_id=KKZ53196.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 141803 142399 . + . ID=gene-AAX15_08670;Name=AAX15_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08670 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 141803 142399 . + 0 ID=cds-KKZ53184.1;Parent=gene-AAX15_08670;Dbxref=NCBI_GP:KKZ53184.1;Name=KKZ53184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672285.1;locus_tag=AAX15_08670;product=molecular chaperone GrpE;protein_id=KKZ53184.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 142960 144006 . + . ID=gene-AAX15_08675;Name=AAX15_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08675 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 142960 144006 . + 0 ID=cds-KKZ53185.1;Parent=gene-AAX15_08675;Dbxref=NCBI_GP:KKZ53185.1;Name=KKZ53185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013746253.1;locus_tag=AAX15_08675;product=hypothetical protein;protein_id=KKZ53185.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 144015 145160 . + . ID=gene-AAX15_08680;Name=AAX15_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08680 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 144015 145160 . + 0 ID=cds-KKZ53186.1;Parent=gene-AAX15_08680;Dbxref=NCBI_GP:KKZ53186.1;Name=KKZ53186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658404.1;locus_tag=AAX15_08680;product=ribonucleoside-triphosphate reductase;protein_id=KKZ53186.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 145160 146533 . + . ID=gene-AAX15_08685;Name=AAX15_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08685 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 145160 146533 . + 0 ID=cds-KKZ53187.1;Parent=gene-AAX15_08685;Dbxref=NCBI_GP:KKZ53187.1;Name=KKZ53187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661142.1;locus_tag=AAX15_08685;product=hypothetical protein;protein_id=KKZ53187.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 146534 147586 . + . ID=gene-AAX15_08690;Name=AAX15_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08690 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 146534 147586 . + 0 ID=cds-KKZ53188.1;Parent=gene-AAX15_08690;Dbxref=NCBI_GP:KKZ53188.1;Name=KKZ53188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658399.1;locus_tag=AAX15_08690;product=kWG Leptospira;protein_id=KKZ53188.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 147599 147859 . + . ID=gene-AAX15_08695;Name=AAX15_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08695 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 147599 147859 . + 0 ID=cds-KKZ53189.1;Parent=gene-AAX15_08695;Dbxref=NCBI_GP:KKZ53189.1;Name=KKZ53189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658398.1;locus_tag=AAX15_08695;product=hypothetical protein;protein_id=KKZ53189.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 148419 150542 . + . ID=gene-AAX15_08700;Name=AAX15_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08700 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 148419 150542 . + 0 ID=cds-KKZ53190.1;Parent=gene-AAX15_08700;Dbxref=NCBI_GP:KKZ53190.1;Name=KKZ53190.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627918.1;locus_tag=AAX15_08700;product=ribonucleoside-triphosphate reductase;protein_id=KKZ53190.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 150660 151520 . + . ID=gene-AAX15_08705;Name=AAX15_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08705 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 150660 151520 . + 0 ID=cds-KKZ53191.1;Parent=gene-AAX15_08705;Dbxref=NCBI_GP:KKZ53191.1;Name=KKZ53191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708204.1;locus_tag=AAX15_08705;product=acyl-CoA thioesterase;protein_id=KKZ53191.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 151532 152398 . + . ID=gene-AAX15_08710;Name=AAX15_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08710 GCA_001008275.1|LCTH01000057.1 Protein Homology CDS 151532 152398 . + 0 ID=cds-KKZ53192.1;Parent=gene-AAX15_08710;Dbxref=NCBI_GP:KKZ53192.1;Name=KKZ53192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43935.1;locus_tag=AAX15_08710;product=ribonucleoside-triphosphate reductase;protein_id=KKZ53192.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 152403 152708 . + . ID=gene-AAX15_08715;Name=AAX15_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08715 GCA_001008275.1|LCTH01000057.1 GeneMarkS+ CDS 152403 152708 . + 0 ID=cds-KKZ53193.1;Parent=gene-AAX15_08715;Dbxref=NCBI_GP:KKZ53193.1;Name=KKZ53193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_08715;product=hypothetical protein;protein_id=KKZ53193.1;transl_table=11 GCA_001008275.1|LCTH01000057.1 Genbank gene 152906 153135 . + . ID=gene-AAX15_08720;Name=AAX15_08720;end_range=153135,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08720;partial=true GCA_001008275.1|LCTH01000057.1 GeneMarkS+ CDS 152906 153135 . + 0 ID=cds-KKZ53194.1;Parent=gene-AAX15_08720;Dbxref=NCBI_GP:KKZ53194.1;Name=KKZ53194.1;end_range=153135,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_08720;partial=true;product=hypothetical protein;protein_id=KKZ53194.1;transl_table=11 ##sequence-region LCTH01000058.1 1 37824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000058.1 Genbank region 1 37824 . + . ID=LCTH01000058.1:1..37824;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000058.1 Protein Homology pseudogene 3618 6245 . - . ID=gene-AAX15_08725;Name=AAX15_08725;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_08725;pseudo=true GCA_001008275.1|LCTH01000058.1 Genbank gene 6315 8087 . - . ID=gene-AAX15_08730;Name=AAX15_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08730 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 6315 8087 . - 0 ID=cds-KKZ52991.1;Parent=gene-AAX15_08730;Dbxref=NCBI_GP:KKZ52991.1;Name=KKZ52991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638630.1;locus_tag=AAX15_08730;product=peptide transporter;protein_id=KKZ52991.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 8269 10734 . - . ID=gene-AAX15_08735;Name=AAX15_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08735 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 8269 10734 . - 0 ID=cds-KKZ52992.1;Parent=gene-AAX15_08735;Dbxref=NCBI_GP:KKZ52992.1;Name=KKZ52992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636059.1;locus_tag=AAX15_08735;product=maltodextrin phosphorylase;protein_id=KKZ52992.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 10975 12405 . - . ID=gene-AAX15_08740;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=AAX15_08740 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 10975 12405 . - 0 ID=cds-KKZ52993.1;Parent=gene-AAX15_08740;Dbxref=NCBI_GP:KKZ52993.1;Name=KKZ52993.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636058.1;locus_tag=AAX15_08740;product=glycogen synthase;protein_id=KKZ52993.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 12602 13903 . - . ID=gene-AAX15_08745;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=AAX15_08745 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 12602 13903 . - 0 ID=cds-KKZ52994.1;Parent=gene-AAX15_08745;Dbxref=NCBI_GP:KKZ52994.1;Name=KKZ52994.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645431.1;locus_tag=AAX15_08745;product=glucose-1-phosphate adenylyltransferase;protein_id=KKZ52994.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 13926 15902 . - . ID=gene-AAX15_08750;Name=AAX15_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08750 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 13926 15902 . - 0 ID=cds-KKZ52995.1;Parent=gene-AAX15_08750;Dbxref=NCBI_GP:KKZ52995.1;Name=KKZ52995.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641890.1;locus_tag=AAX15_08750;product=glycogen debranching protein;protein_id=KKZ52995.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 15906 18095 . - . ID=gene-AAX15_08755;Name=AAX15_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08755 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 15906 18095 . - 0 ID=cds-KKZ52996.1;Parent=gene-AAX15_08755;Dbxref=NCBI_GP:KKZ52996.1;Name=KKZ52996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641888.1;locus_tag=AAX15_08755;product=glycogen branching protein;protein_id=KKZ52996.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 18105 20195 . - . ID=gene-AAX15_08760;Name=AAX15_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08760 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 18105 20195 . - 0 ID=cds-KKZ52997.1;Parent=gene-AAX15_08760;Dbxref=NCBI_GP:KKZ52997.1;Name=KKZ52997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500292.1;locus_tag=AAX15_08760;product=4-alpha-glucanotransferase;protein_id=KKZ52997.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 20373 22217 . - . ID=gene-AAX15_08765;Name=AAX15_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08765 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 20373 22217 . - 0 ID=cds-KKZ52998.1;Parent=gene-AAX15_08765;Dbxref=NCBI_GP:KKZ52998.1;Name=KKZ52998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641884.1;locus_tag=AAX15_08765;product=adhesin;protein_id=KKZ52998.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 22348 22779 . - . ID=gene-AAX15_08770;Name=AAX15_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08770 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 22348 22779 . - 0 ID=cds-KKZ52999.1;Parent=gene-AAX15_08770;Dbxref=NCBI_GP:KKZ52999.1;Name=KKZ52999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641881.1;locus_tag=AAX15_08770;product=hypothetical protein;protein_id=KKZ52999.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 22846 24516 . - . ID=gene-AAX15_08775;Name=AAX15_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08775 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 22846 24516 . - 0 ID=cds-KKZ53000.1;Parent=gene-AAX15_08775;Dbxref=NCBI_GP:KKZ53000.1;Name=KKZ53000.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500294.1;locus_tag=AAX15_08775;product=glutamate--tRNA ligase;protein_id=KKZ53000.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 24821 26188 . + . ID=gene-AAX15_08780;Name=AAX15_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08780 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 24821 26188 . + 0 ID=cds-KKZ53001.1;Parent=gene-AAX15_08780;Dbxref=NCBI_GP:KKZ53001.1;Name=KKZ53001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500295.1;locus_tag=AAX15_08780;product=membrane protein;protein_id=KKZ53001.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 26278 26907 . + . ID=gene-AAX15_08785;Name=AAX15_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08785 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 26278 26907 . + 0 ID=cds-KKZ53002.1;Parent=gene-AAX15_08785;Dbxref=NCBI_GP:KKZ53002.1;Name=KKZ53002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641870.1;locus_tag=AAX15_08785;product=phosphoglycerate mutase;protein_id=KKZ53002.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 27077 28315 . - . ID=gene-AAX15_08790;Name=AAX15_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08790 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 27077 28315 . - 0 ID=cds-KKZ53003.1;Parent=gene-AAX15_08790;Dbxref=NCBI_GP:KKZ53003.1;Name=KKZ53003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645339.1;locus_tag=AAX15_08790;product=peptidase T;protein_id=KKZ53003.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 28612 29730 . + . ID=gene-AAX15_08795;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AAX15_08795 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 28612 29730 . + 0 ID=cds-KKZ53004.1;Parent=gene-AAX15_08795;Dbxref=NCBI_GP:KKZ53004.1;Name=KKZ53004.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;gbkey=CDS;gene=potA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641865.1;locus_tag=AAX15_08795;product=putrescine/spermidine ABC transporter ATPase;protein_id=KKZ53004.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 29714 30574 . + . ID=gene-AAX15_08800;Name=AAX15_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08800 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 29714 30574 . + 0 ID=cds-KKZ53005.1;Parent=gene-AAX15_08800;Dbxref=NCBI_GP:KKZ53005.1;Name=KKZ53005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631801.1;locus_tag=AAX15_08800;product=spermidine/putrescine ABC transporter permease;protein_id=KKZ53005.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 30574 31344 . + . ID=gene-AAX15_08805;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AAX15_08805 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 30574 31344 . + 0 ID=cds-KKZ53006.1;Parent=gene-AAX15_08805;Dbxref=NCBI_GP:KKZ53006.1;Name=KKZ53006.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996068.1;locus_tag=AAX15_08805;product=spermidine/putrescine ABC transporter permease;protein_id=KKZ53006.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 31472 32554 . + . ID=gene-AAX15_08810;Name=AAX15_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08810 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 31472 32554 . + 0 ID=cds-KKZ53007.1;Parent=gene-AAX15_08810;Dbxref=NCBI_GP:KKZ53007.1;Name=KKZ53007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065177.1;locus_tag=AAX15_08810;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=KKZ53007.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 32661 33317 . - . ID=gene-AAX15_08815;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AAX15_08815 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 32661 33317 . - 0 ID=cds-KKZ53008.1;Parent=gene-AAX15_08815;Dbxref=NCBI_GP:KKZ53008.1;Name=KKZ53008.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645472.1;locus_tag=AAX15_08815;product=GTP cyclohydrolase;protein_id=KKZ53008.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 33455 34669 . + . ID=gene-AAX15_08820;Name=AAX15_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08820 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 33455 34669 . + 0 ID=cds-KKZ53009.1;Parent=gene-AAX15_08820;Dbxref=NCBI_GP:KKZ53009.1;Name=KKZ53009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650441.1;locus_tag=AAX15_08820;product=molybdopterin molybdenumtransferase;protein_id=KKZ53009.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 34673 35404 . + . ID=gene-AAX15_08825;Name=AAX15_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08825 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 34673 35404 . + 0 ID=cds-KKZ53010.1;Parent=gene-AAX15_08825;Dbxref=NCBI_GP:KKZ53010.1;Name=KKZ53010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636035.1;locus_tag=AAX15_08825;product=molybdopterin-synthase adenylyltransferase;protein_id=KKZ53010.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 35465 35788 . + . ID=gene-AAX15_08830;Name=AAX15_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08830 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 35465 35788 . + 0 ID=cds-KKZ53011.1;Parent=gene-AAX15_08830;Dbxref=NCBI_GP:KKZ53011.1;Name=KKZ53011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550787.1;locus_tag=AAX15_08830;product=hypothetical protein;protein_id=KKZ53011.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 35856 36773 . - . ID=gene-AAX15_08835;Name=AAX15_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08835 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 35856 36773 . - 0 ID=cds-KKZ53012.1;Parent=gene-AAX15_08835;Dbxref=NCBI_GP:KKZ53012.1;Name=KKZ53012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631813.1;locus_tag=AAX15_08835;product=membrane protein;protein_id=KKZ53012.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 36956 37426 . - . ID=gene-AAX15_08840;Name=AAX15_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08840 GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 36956 37426 . - 0 ID=cds-KKZ53013.1;Parent=gene-AAX15_08840;Dbxref=NCBI_GP:KKZ53013.1;Name=KKZ53013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636032.1;locus_tag=AAX15_08840;product=hypothetical protein;protein_id=KKZ53013.1;transl_table=11 GCA_001008275.1|LCTH01000058.1 Genbank gene 37469 37824 . - . ID=gene-AAX15_08845;Name=AAX15_08845;end_range=37824,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08845;partial=true GCA_001008275.1|LCTH01000058.1 Protein Homology CDS 37469 37824 . - 2 ID=cds-KKZ53014.1;Parent=gene-AAX15_08845;Dbxref=NCBI_GP:KKZ53014.1;Name=KKZ53014.1;end_range=37824,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44202.1;locus_tag=AAX15_08845;partial=true;product=cytochrome C biogenesis protein;protein_id=KKZ53014.1;transl_table=11 ##sequence-region LCTH01000059.1 1 648 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000059.1 Genbank region 1 648 . + . ID=LCTH01000059.1:1..648;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000059.1 Genbank gene 170 648 . + . ID=gene-AAX15_08850;Name=AAX15_08850;end_range=648,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_08850;partial=true GCA_001008275.1|LCTH01000059.1 Genbank rRNA 170 648 . + . ID=rna-AAX15_08850;Parent=gene-AAX15_08850;end_range=648,.;gbkey=rRNA;locus_tag=AAX15_08850;partial=true;product=16S ribosomal RNA GCA_001008275.1|LCTH01000059.1 Genbank exon 170 648 . + . ID=exon-AAX15_08850-1;Parent=rna-AAX15_08850;end_range=648,.;gbkey=rRNA;locus_tag=AAX15_08850;partial=true;product=16S ribosomal RNA ##sequence-region LCTH01000060.1 1 583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000060.1 Genbank region 1 583 . + . ID=LCTH01000060.1:1..583;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000060.1 Genbank gene 1 428 . + . ID=gene-AAX15_08855;Name=AAX15_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08855;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000060.1 Protein Homology CDS 1 428 . + 2 ID=cds-KKZ52896.1;Parent=gene-AAX15_08855;Dbxref=NCBI_GP:KKZ52896.1;Name=KKZ52896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637801.1;locus_tag=AAX15_08855;partial=true;product=phosphatidylethanolamine-binding protein;protein_id=KKZ52896.1;start_range=.,1;transl_table=11 ##sequence-region LCTH01000061.1 1 547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000061.1 Genbank region 1 547 . + . ID=LCTH01000061.1:1..547;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000061.1 Genbank gene 1 547 . - . ID=gene-AAX15_08860;Name=AAX15_08860;end_range=547,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08860;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000061.1 GeneMarkS+ CDS 1 547 . - 0 ID=cds-KKZ52878.1;Parent=gene-AAX15_08860;Dbxref=NCBI_GP:KKZ52878.1;Name=KKZ52878.1;end_range=547,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_08860;partial=true;product=hypothetical protein;protein_id=KKZ52878.1;start_range=.,1;transl_table=11 ##sequence-region LCTH01000062.1 1 10184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000062.1 Genbank region 1 10184 . + . ID=LCTH01000062.1:1..10184;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000062.1 Genbank gene 291 1589 . + . ID=gene-AAX15_08865;Name=AAX15_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08865 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 291 1589 . + 0 ID=cds-KKZ52793.1;Parent=gene-AAX15_08865;Dbxref=NCBI_GP:KKZ52793.1;Name=KKZ52793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694636.1;locus_tag=AAX15_08865;product=trigger factor;protein_id=KKZ52793.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 1716 2297 . + . ID=gene-AAX15_08870;Name=AAX15_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08870 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 1716 2297 . + 0 ID=cds-KKZ52794.1;Parent=gene-AAX15_08870;Dbxref=NCBI_GP:KKZ52794.1;Name=KKZ52794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE11.1;locus_tag=AAX15_08870;product=Clp protease ClpP;protein_id=KKZ52794.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 2306 3547 . + . ID=gene-AAX15_08875;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AAX15_08875 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 2306 3547 . + 0 ID=cds-KKZ52795.1;Parent=gene-AAX15_08875;Dbxref=NCBI_GP:KKZ52795.1;Name=KKZ52795.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636068.1;locus_tag=AAX15_08875;product=Clp protease ClpX;protein_id=KKZ52795.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 3687 4103 . + . ID=gene-AAX15_08880;Name=AAX15_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08880 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 3687 4103 . + 0 ID=cds-KKZ52796.1;Parent=gene-AAX15_08880;Dbxref=NCBI_GP:KKZ52796.1;Name=KKZ52796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636067.1;locus_tag=AAX15_08880;product=preprotein translocase subunit SecE;protein_id=KKZ52796.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 4105 4662 . + . ID=gene-AAX15_08885;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AAX15_08885 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 4105 4662 . + 0 ID=cds-KKZ52797.1;Parent=gene-AAX15_08885;Dbxref=NCBI_GP:KKZ52797.1;Name=KKZ52797.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500266.1;locus_tag=AAX15_08885;product=transcription antiterminator NusG;protein_id=KKZ52797.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 4881 5516 . - . ID=gene-AAX15_08890;Name=AAX15_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08890 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 4881 5516 . - 0 ID=cds-KKZ52798.1;Parent=gene-AAX15_08890;Dbxref=NCBI_GP:KKZ52798.1;Name=KKZ52798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710176.1;locus_tag=AAX15_08890;product=membrane protein;protein_id=KKZ52798.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 5516 5971 . - . ID=gene-AAX15_08895;Name=AAX15_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08895 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 5516 5971 . - 0 ID=cds-KKZ52799.1;Parent=gene-AAX15_08895;Dbxref=NCBI_GP:KKZ52799.1;Name=KKZ52799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710179.1;locus_tag=AAX15_08895;product=hypothetical protein;protein_id=KKZ52799.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 6048 6881 . - . ID=gene-AAX15_08900;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AAX15_08900 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 6048 6881 . - 0 ID=cds-KKZ52800.1;Parent=gene-AAX15_08900;Dbxref=NCBI_GP:KKZ52800.1;Name=KKZ52800.1;gbkey=CDS;gene=metQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500267.1;locus_tag=AAX15_08900;product=DL-methionine transporter substrate-binding subunit;protein_id=KKZ52800.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 6920 7609 . - . ID=gene-AAX15_08905;Name=AAX15_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08905 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 6920 7609 . - 0 ID=cds-KKZ52801.1;Parent=gene-AAX15_08905;Dbxref=NCBI_GP:KKZ52801.1;Name=KKZ52801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648554.1;locus_tag=AAX15_08905;product=methionine ABC transporter permease;protein_id=KKZ52801.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 7599 8636 . - . ID=gene-AAX15_08910;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AAX15_08910 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 7599 8636 . - 0 ID=cds-KKZ52802.1;Parent=gene-AAX15_08910;Dbxref=NCBI_GP:KKZ52802.1;Name=KKZ52802.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692764.1;locus_tag=AAX15_08910;product=DL-methionine transporter ATP-binding subunit;protein_id=KKZ52802.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 8812 9366 . + . ID=gene-AAX15_08915;Name=AAX15_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08915 GCA_001008275.1|LCTH01000062.1 Protein Homology CDS 8812 9366 . + 0 ID=cds-KKZ52803.1;Parent=gene-AAX15_08915;Dbxref=NCBI_GP:KKZ52803.1;Name=KKZ52803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688251.1;locus_tag=AAX15_08915;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=KKZ52803.1;transl_table=11 GCA_001008275.1|LCTH01000062.1 Genbank gene 9704 10184 . + . ID=gene-AAX15_08920;Name=AAX15_08920;end_range=10184,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AAX15_08920;partial=true GCA_001008275.1|LCTH01000062.1 Genbank rRNA 9704 10184 . + . ID=rna-AAX15_08920;Parent=gene-AAX15_08920;end_range=10184,.;gbkey=rRNA;locus_tag=AAX15_08920;partial=true;product=16S ribosomal RNA GCA_001008275.1|LCTH01000062.1 Genbank exon 9704 10184 . + . ID=exon-AAX15_08920-1;Parent=rna-AAX15_08920;end_range=10184,.;gbkey=rRNA;locus_tag=AAX15_08920;partial=true;product=16S ribosomal RNA ##sequence-region LCTH01000063.1 1 39511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=726 GCA_001008275.1|LCTH01000063.1 Genbank region 1 39511 . + . ID=LCTH01000063.1:1..39511;Dbxref=taxon:726;collected-by=T. F. Murphy;country=USA: NY%2C Buffalo;gbkey=Src;isolation-source=nasopharynx;mol_type=genomic DNA;nat-host=Homo sapiens;strain=27P25 GCA_001008275.1|LCTH01000063.1 Genbank gene 1 130 . - . ID=gene-AAX15_08925;Name=AAX15_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08925;partial=true;start_range=.,1 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 1 130 . - 0 ID=cds-KKZ52658.1;Parent=gene-AAX15_08925;Dbxref=NCBI_GP:KKZ52658.1;Name=KKZ52658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500480.1;locus_tag=AAX15_08925;partial=true;product=phosphatidylethanolamine-binding protein;protein_id=KKZ52658.1;start_range=.,1;transl_table=11 GCA_001008275.1|LCTH01000063.1 cmsearch sequence_feature 717 837 . + . ID=id-LCTH01000063.1:717..837;Note=ribosomal protein S15 leader;gbkey=misc_feature GCA_001008275.1|LCTH01000063.1 Genbank gene 781 1050 . + . ID=gene-AAX15_08930;Name=AAX15_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08930 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 781 1050 . + 0 ID=cds-KKZ52659.1;Parent=gene-AAX15_08930;Dbxref=NCBI_GP:KKZ52659.1;Name=KKZ52659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702347.1;locus_tag=AAX15_08930;product=30S ribosomal protein S15;protein_id=KKZ52659.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Protein Homology pseudogene 1183 2514 . - . ID=gene-AAX15_08935;Name=AAX15_08935;Note=disrupted;description=ABC transporter ATP-binding protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AAX15_08935;pseudo=true GCA_001008275.1|LCTH01000063.1 Genbank gene 2584 4023 . - . ID=gene-AAX15_08940;Name=AAX15_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08940 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 2584 4023 . - 0 ID=cds-KKZ52660.1;Parent=gene-AAX15_08940;Dbxref=NCBI_GP:KKZ52660.1;Name=KKZ52660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671392.1;locus_tag=AAX15_08940;product=D-alanyl-D-alanine carboxypeptidase;protein_id=KKZ52660.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 4187 4663 . + . ID=gene-AAX15_08945;Name=AAX15_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08945 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 4187 4663 . + 0 ID=cds-KKZ52661.1;Parent=gene-AAX15_08945;Dbxref=NCBI_GP:KKZ52661.1;Name=KKZ52661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702211.1;locus_tag=AAX15_08945;product=transcription elongation factor GreA;protein_id=KKZ52661.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 4702 5001 . - . ID=gene-AAX15_08950;Name=AAX15_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08950 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 4702 5001 . - 0 ID=cds-KKZ52662.1;Parent=gene-AAX15_08950;Dbxref=NCBI_GP:KKZ52662.1;Name=KKZ52662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688408.1;locus_tag=AAX15_08950;product=RNA-binding protein;protein_id=KKZ52662.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 5128 5757 . + . ID=gene-AAX15_08955;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=AAX15_08955 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 5128 5757 . + 0 ID=cds-KKZ52663.1;Parent=gene-AAX15_08955;Dbxref=NCBI_GP:KKZ52663.1;Name=KKZ52663.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995972.1;locus_tag=AAX15_08955;product=23S rRNA methyltransferase;protein_id=KKZ52663.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 5847 7739 . + . ID=gene-AAX15_08960;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=AAX15_08960 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 5847 7739 . + 0 ID=cds-KKZ52664.1;Parent=gene-AAX15_08960;Dbxref=NCBI_GP:KKZ52664.1;Name=KKZ52664.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628911.1;locus_tag=AAX15_08960;product=ATP-dependent metalloprotease;protein_id=KKZ52664.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 7875 8702 . + . ID=gene-AAX15_08965;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AAX15_08965 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 7875 8702 . + 0 ID=cds-KKZ52665.1;Parent=gene-AAX15_08965;Dbxref=NCBI_GP:KKZ52665.1;Name=KKZ52665.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962129.1;locus_tag=AAX15_08965;product=dihydropteroate synthase;protein_id=KKZ52665.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 8740 10074 . + . ID=gene-AAX15_08970;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AAX15_08970 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 8740 10074 . + 0 ID=cds-KKZ52666.1;Parent=gene-AAX15_08970;Dbxref=NCBI_GP:KKZ52666.1;Name=KKZ52666.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631581.1;locus_tag=AAX15_08970;product=phosphoglucosamine mutase;protein_id=KKZ52666.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 10137 10634 . + . ID=gene-AAX15_08975;Name=AAX15_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08975 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 10137 10634 . + 0 ID=cds-KKZ52667.1;Parent=gene-AAX15_08975;Dbxref=NCBI_GP:KKZ52667.1;Name=KKZ52667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631583.1;locus_tag=AAX15_08975;product=phosphohistidine phosphatase;protein_id=KKZ52667.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 10855 11322 . + . ID=gene-AAX15_08980;Name=AAX15_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08980 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 10855 11322 . + 0 ID=cds-KKZ52668.1;Parent=gene-AAX15_08980;Dbxref=NCBI_GP:KKZ52668.1;Name=KKZ52668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637902.1;locus_tag=AAX15_08980;product=hypothetical protein;protein_id=KKZ52668.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 11401 11667 . + . ID=gene-AAX15_08985;Name=AAX15_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08985 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 11401 11667 . + 0 ID=cds-KKZ52669.1;Parent=gene-AAX15_08985;Dbxref=NCBI_GP:KKZ52669.1;Name=KKZ52669.1;Note=YcgL domain-containing protein CGSHiEE_04830;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644657.1;locus_tag=AAX15_08985;product=YcgL domain-containing protein;protein_id=KKZ52669.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 11769 12497 . + . ID=gene-AAX15_08990;Name=AAX15_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_08990 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 11769 12497 . + 0 ID=cds-KKZ52670.1;Parent=gene-AAX15_08990;Dbxref=NCBI_GP:KKZ52670.1;Name=KKZ52670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642061.1;locus_tag=AAX15_08990;product=dethiobiotin synthetase;protein_id=KKZ52670.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 12583 13464 . - . ID=gene-AAX15_08995;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AAX15_08995 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 12583 13464 . - 0 ID=cds-KKZ52671.1;Parent=gene-AAX15_08995;Dbxref=NCBI_GP:KKZ52671.1;Name=KKZ52671.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631590.1;locus_tag=AAX15_08995;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=KKZ52671.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 13775 14203 . + . ID=gene-AAX15_09000;Name=AAX15_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09000 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 13775 14203 . + 0 ID=cds-KKZ52672.1;Parent=gene-AAX15_09000;Dbxref=NCBI_GP:KKZ52672.1;Name=KKZ52672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015432456.1;locus_tag=AAX15_09000;product=50S ribosomal protein L13;protein_id=KKZ52672.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 14220 14612 . + . ID=gene-AAX15_09005;Name=AAX15_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09005 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 14220 14612 . + 0 ID=cds-KKZ52673.1;Parent=gene-AAX15_09005;Dbxref=NCBI_GP:KKZ52673.1;Name=KKZ52673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKG9.1;locus_tag=AAX15_09005;product=30S ribosomal protein S9;protein_id=KKZ52673.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 14786 15424 . + . ID=gene-AAX15_09010;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AAX15_09010 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 14786 15424 . + 0 ID=cds-KKZ52674.1;Parent=gene-AAX15_09010;Dbxref=NCBI_GP:KKZ52674.1;Name=KKZ52674.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500561.1;locus_tag=AAX15_09010;product=stringent starvation protein A;protein_id=KKZ52674.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 15424 15876 . + . ID=gene-AAX15_09015;Name=AAX15_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09015 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 15424 15876 . + 0 ID=cds-KKZ52675.1;Parent=gene-AAX15_09015;Dbxref=NCBI_GP:KKZ52675.1;Name=KKZ52675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628889.1;locus_tag=AAX15_09015;product=starvation protein B;protein_id=KKZ52675.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 15921 16145 . - . ID=gene-AAX15_09020;Name=AAX15_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09020 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 15921 16145 . - 0 ID=cds-KKZ52676.1;Parent=gene-AAX15_09020;Dbxref=NCBI_GP:KKZ52676.1;Name=KKZ52676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008608339.1;locus_tag=AAX15_09020;product=hypothetical protein;protein_id=KKZ52676.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 16241 16519 . + . ID=gene-AAX15_09025;Name=AAX15_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09025 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 16241 16519 . + 0 ID=cds-KKZ52677.1;Parent=gene-AAX15_09025;Dbxref=NCBI_GP:KKZ52677.1;Name=KKZ52677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702330.1;locus_tag=AAX15_09025;product=XRE family transcriptional regulator;protein_id=KKZ52677.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 16571 18445 . - . ID=gene-AAX15_09030;Name=AAX15_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09030 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 16571 18445 . - 0 ID=cds-KKZ52678.1;Parent=gene-AAX15_09030;Dbxref=NCBI_GP:KKZ52678.1;Name=KKZ52678.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666875.1;locus_tag=AAX15_09030;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=KKZ52678.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 18500 19390 . - . ID=gene-AAX15_09035;Name=AAX15_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09035 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 18500 19390 . - 0 ID=cds-KKZ52679.1;Parent=gene-AAX15_09035;Dbxref=NCBI_GP:KKZ52679.1;Name=KKZ52679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628884.1;locus_tag=AAX15_09035;product=geranyl transferase;protein_id=KKZ52679.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 19390 19629 . - . ID=gene-AAX15_09040;Name=AAX15_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09040 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 19390 19629 . - 0 ID=cds-KKZ52680.1;Parent=gene-AAX15_09040;Dbxref=NCBI_GP:KKZ52680.1;Name=KKZ52680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550779.1;locus_tag=AAX15_09040;product=exodeoxyribonuclease VII small subunit;protein_id=KKZ52680.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 19777 21234 . + . ID=gene-AAX15_09045;Name=AAX15_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09045 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 19777 21234 . + 0 ID=cds-KKZ52697.1;Parent=gene-AAX15_09045;Dbxref=NCBI_GP:KKZ52697.1;Name=KKZ52697.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631606.1;locus_tag=AAX15_09045;product=tRNA s(4)U8 sulfurtransferase;protein_id=KKZ52697.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 21249 21569 . + . ID=gene-AAX15_09050;Name=AAX15_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09050 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 21249 21569 . + 0 ID=cds-KKZ52681.1;Parent=gene-AAX15_09050;Dbxref=NCBI_GP:KKZ52681.1;Name=KKZ52681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642077.1;locus_tag=AAX15_09050;product=anhydro-N-acetylmuramic acid kinase;protein_id=KKZ52681.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 21563 22282 . + . ID=gene-AAX15_09055;Name=AAX15_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09055 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 21563 22282 . + 0 ID=cds-KKZ52682.1;Parent=gene-AAX15_09055;Dbxref=NCBI_GP:KKZ52682.1;Name=KKZ52682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656617.1;locus_tag=AAX15_09055;product=pseudouridine synthase;protein_id=KKZ52682.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 22275 22433 . + . ID=gene-AAX15_09060;Name=AAX15_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09060 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 22275 22433 . + 0 ID=cds-KKZ52683.1;Parent=gene-AAX15_09060;Dbxref=NCBI_GP:KKZ52683.1;Name=KKZ52683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKG0.1;locus_tag=AAX15_09060;product=hypothetical protein;protein_id=KKZ52683.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 22578 22796 . + . ID=gene-AAX15_09065;Name=AAX15_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09065 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 22578 22796 . + 0 ID=cds-KKZ52684.1;Parent=gene-AAX15_09065;Dbxref=NCBI_GP:KKZ52684.1;Name=KKZ52684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628872.1;locus_tag=AAX15_09065;product=cold-shock protein;protein_id=KKZ52684.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 22865 23311 . - . ID=gene-AAX15_09070;Name=AAX15_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09070 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 22865 23311 . - 0 ID=cds-KKZ52685.1;Parent=gene-AAX15_09070;Dbxref=NCBI_GP:KKZ52685.1;Name=KKZ52685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44161.1;locus_tag=AAX15_09070;product=Ter macrodomain organizer matS-binding protein;protein_id=KKZ52685.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 23438 25213 . + . ID=gene-AAX15_09075;Name=AAX15_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09075 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 23438 25213 . + 0 ID=cds-KKZ52686.1;Parent=gene-AAX15_09075;Dbxref=NCBI_GP:KKZ52686.1;Name=KKZ52686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631613.1;locus_tag=AAX15_09075;product=peptidase;protein_id=KKZ52686.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 25383 25916 . + . ID=gene-AAX15_09080;Name=AAX15_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09080 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 25383 25916 . + 0 ID=cds-KKZ52687.1;Parent=gene-AAX15_09080;Dbxref=NCBI_GP:KKZ52687.1;Name=KKZ52687.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702207.1;locus_tag=AAX15_09080;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=KKZ52687.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 26025 26591 . - . ID=gene-AAX15_09085;Name=AAX15_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09085 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 26025 26591 . - 0 ID=cds-KKZ52688.1;Parent=gene-AAX15_09085;Dbxref=NCBI_GP:KKZ52688.1;Name=KKZ52688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637869.1;locus_tag=AAX15_09085;product=membrane protein;protein_id=KKZ52688.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 26665 27387 . + . ID=gene-AAX15_09090;Name=AAX15_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09090 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 26665 27387 . + 0 ID=cds-KKZ52689.1;Parent=gene-AAX15_09090;Dbxref=NCBI_GP:KKZ52689.1;Name=KKZ52689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631619.1;locus_tag=AAX15_09090;product=hypothetical protein;protein_id=KKZ52689.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 27387 27521 . + . ID=gene-AAX15_09095;Name=AAX15_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09095 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 27387 27521 . + 0 ID=cds-KKZ52690.1;Parent=gene-AAX15_09095;Dbxref=NCBI_GP:KKZ52690.1;Name=KKZ52690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631621.1;locus_tag=AAX15_09095;product=hypothetical protein;protein_id=KKZ52690.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 27624 27700 . + . ID=gene-AAX15_09100;Name=AAX15_09100;gbkey=Gene;gene_biotype=tRNA;locus_tag=AAX15_09100 GCA_001008275.1|LCTH01000063.1 tRNAscan-SE tRNA 27624 27700 . + . ID=rna-AAX15_09100;Parent=gene-AAX15_09100;anticodon=(pos:27658..27660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_09100;product=tRNA-Met GCA_001008275.1|LCTH01000063.1 tRNAscan-SE exon 27624 27700 . + . ID=exon-AAX15_09100-1;Parent=rna-AAX15_09100;anticodon=(pos:27658..27660);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AAX15_09100;product=tRNA-Met GCA_001008275.1|LCTH01000063.1 Genbank gene 27887 28342 . + . ID=gene-AAX15_09105;Name=AAX15_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09105 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 27887 28342 . + 0 ID=cds-KKZ52691.1;Parent=gene-AAX15_09105;Dbxref=NCBI_GP:KKZ52691.1;Name=KKZ52691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652912.1;locus_tag=AAX15_09105;product=ribosome maturation protein RimP;protein_id=KKZ52691.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 28360 29847 . + . ID=gene-AAX15_09110;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AAX15_09110 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 28360 29847 . + 0 ID=cds-KKZ52692.1;Parent=gene-AAX15_09110;Dbxref=NCBI_GP:KKZ52692.1;Name=KKZ52692.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:SwissProt:P43915.1;locus_tag=AAX15_09110;product=transcription elongation factor NusA;protein_id=KKZ52692.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 29859 32393 . + . ID=gene-AAX15_09115;Name=AAX15_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09115 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 29859 32393 . + 0 ID=cds-KKZ52693.1;Parent=gene-AAX15_09115;Dbxref=NCBI_GP:KKZ52693.1;Name=KKZ52693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525762.1;locus_tag=AAX15_09115;product=translation initiation factor IF-2;protein_id=KKZ52693.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 32472 35636 . - . ID=gene-AAX15_09120;Name=AAX15_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09120 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 32472 35636 . - 0 ID=cds-KKZ52694.1;Parent=gene-AAX15_09120;Dbxref=NCBI_GP:KKZ52694.1;Name=KKZ52694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644827.1;locus_tag=AAX15_09120;product=restriction endonuclease HindVIIP subunit R;protein_id=KKZ52694.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 35837 36469 . - . ID=gene-AAX15_09125;Name=AAX15_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09125 GCA_001008275.1|LCTH01000063.1 GeneMarkS+ CDS 35837 36469 . - 0 ID=cds-KKZ52695.1;Parent=gene-AAX15_09125;Dbxref=NCBI_GP:KKZ52695.1;Name=KKZ52695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AAX15_09125;product=hypothetical protein;protein_id=KKZ52695.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 36471 37808 . - . ID=gene-AAX15_09130;Name=AAX15_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09130 GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 36471 37808 . - 0 ID=cds-KKZ52698.1;Parent=gene-AAX15_09130;Dbxref=NCBI_GP:KKZ52698.1;Name=KKZ52698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652889.1;locus_tag=AAX15_09130;product=hypothetical protein;protein_id=KKZ52698.1;transl_table=11 GCA_001008275.1|LCTH01000063.1 Genbank gene 37840 39511 . - . ID=gene-AAX15_09135;Name=AAX15_09135;end_range=39511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AAX15_09135;partial=true GCA_001008275.1|LCTH01000063.1 Protein Homology CDS 37840 39511 . - 1 ID=cds-KKZ52696.1;Parent=gene-AAX15_09135;Dbxref=NCBI_GP:KKZ52696.1;Name=KKZ52696.1;end_range=39511,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500542.1;locus_tag=AAX15_09135;partial=true;product=restriction endonuclease HindVIIP subunit M;protein_id=KKZ52696.1;transl_table=11 ###