##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM588818v1
#!genome-build-accession NCBI_Assembly:GCA_005888185.1
#!annotation-date 11/19/2015 19:45:52
#!annotation-source NCBI 
##sequence-region LNKP01000001.1 1 2699
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000001.1	Genbank	region	1	2699	.	+	.	ID=LNKP01000001.1:1..2699;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000001.1	Genbank	gene	1	969	.	+	.	ID=gene-AO053_00005;Name=AO053_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00005;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000001.1	Protein Homology	CDS	1	969	.	+	0	ID=cds-TMQ40978.1;Parent=gene-AO053_00005;Dbxref=NCBI_GP:TMQ40978.1;Name=TMQ40978.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525885.1;locus_tag=AO053_00005;partial=true;product=protein licA;protein_id=TMQ40978.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000001.1	Genbank	gene	969	1847	.	+	.	ID=gene-AO053_00010;Name=AO053_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00010
GCA_005888185.1|LNKP01000001.1	Protein Homology	CDS	969	1847	.	+	0	ID=cds-TMQ40979.1;Parent=gene-AO053_00010;Dbxref=NCBI_GP:TMQ40979.1;Name=TMQ40979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632346.1;locus_tag=AO053_00010;product=protein licB;protein_id=TMQ40979.1;transl_table=11
GCA_005888185.1|LNKP01000001.1	Genbank	gene	1844	2545	.	+	.	ID=gene-AO053_00015;Name=AO053_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00015
GCA_005888185.1|LNKP01000001.1	Protein Homology	CDS	1844	2545	.	+	0	ID=cds-TMQ40980.1;Parent=gene-AO053_00015;Dbxref=NCBI_GP:TMQ40980.1;Name=TMQ40980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656836.1;locus_tag=AO053_00015;product=protein licC;protein_id=TMQ40980.1;transl_table=11
##sequence-region LNKP01000002.1 1 9754
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000002.1	Genbank	region	1	9754	.	+	.	ID=LNKP01000002.1:1..9754;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000002.1	Genbank	pseudogene	1	379	.	-	.	ID=gene-AO053_00020;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO053_00020;pseudo=true
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	1	379	.	-	0	ID=cds-AO053_00020;Parent=gene-AO053_00020;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578004.1;locus_tag=AO053_00020;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	484	559	.	-	.	ID=gene-AO053_00025;Name=AO053_00025;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00025
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	tRNA	484	559	.	-	.	ID=rna-AO053_00025;Parent=gene-AO053_00025;anticodon=(pos:complement(524..526));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00025;product=tRNA-Thr
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	exon	484	559	.	-	.	ID=exon-AO053_00025-1;Parent=rna-AO053_00025;anticodon=(pos:complement(524..526));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00025;product=tRNA-Thr
GCA_005888185.1|LNKP01000002.1	Genbank	gene	563	637	.	-	.	ID=gene-AO053_00030;Name=AO053_00030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00030
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	tRNA	563	637	.	-	.	ID=rna-AO053_00030;Parent=gene-AO053_00030;anticodon=(pos:complement(602..604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00030;product=tRNA-Gly
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	exon	563	637	.	-	.	ID=exon-AO053_00030-1;Parent=rna-AO053_00030;anticodon=(pos:complement(602..604));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00030;product=tRNA-Gly
GCA_005888185.1|LNKP01000002.1	Genbank	gene	680	764	.	-	.	ID=gene-AO053_00035;Name=AO053_00035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00035
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	tRNA	680	764	.	-	.	ID=rna-AO053_00035;Parent=gene-AO053_00035;anticodon=(pos:complement(728..730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00035;product=tRNA-Tyr
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	exon	680	764	.	-	.	ID=exon-AO053_00035-1;Parent=rna-AO053_00035;anticodon=(pos:complement(728..730));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00035;product=tRNA-Tyr
GCA_005888185.1|LNKP01000002.1	Genbank	gene	794	869	.	-	.	ID=gene-AO053_00040;Name=AO053_00040;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00040
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	tRNA	794	869	.	-	.	ID=rna-AO053_00040;Parent=gene-AO053_00040;anticodon=(pos:complement(834..836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00040;product=tRNA-Thr
GCA_005888185.1|LNKP01000002.1	tRNAscan-SE	exon	794	869	.	-	.	ID=exon-AO053_00040-1;Parent=rna-AO053_00040;anticodon=(pos:complement(834..836));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00040;product=tRNA-Thr
GCA_005888185.1|LNKP01000002.1	Genbank	gene	1086	2009	.	+	.	ID=gene-AO053_00045;Name=AO053_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00045
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	1086	2009	.	+	0	ID=cds-TMQ40968.1;Parent=gene-AO053_00045;Dbxref=NCBI_GP:TMQ40968.1;Name=TMQ40968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655205.1;locus_tag=AO053_00045;product=type I pantothenate kinase;protein_id=TMQ40968.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	2100	3050	.	-	.	ID=gene-AO053_00050;Name=AO053_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00050
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	2100	3050	.	-	0	ID=cds-TMQ40969.1;Parent=gene-AO053_00050;Dbxref=NCBI_GP:TMQ40969.1;Name=TMQ40969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551139.1;locus_tag=AO053_00050;product=transcriptional regulator;protein_id=TMQ40969.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	3130	3717	.	-	.	ID=gene-AO053_00055;Name=AO053_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00055
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	3130	3717	.	-	0	ID=cds-TMQ40970.1;Parent=gene-AO053_00055;Dbxref=NCBI_GP:TMQ40970.1;Name=TMQ40970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701775.1;locus_tag=AO053_00055;product=transcriptional regulator;protein_id=TMQ40970.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	3742	4311	.	-	.	ID=gene-AO053_00060;Name=AO053_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00060
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	3742	4311	.	-	0	ID=cds-TMQ40971.1;Parent=gene-AO053_00060;Dbxref=NCBI_GP:TMQ40971.1;Name=TMQ40971.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995292.1;locus_tag=AO053_00060;product=RNA polymerase sigma factor RpoE;protein_id=TMQ40971.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	4420	4677	.	-	.	ID=gene-AO053_00065;Name=AO053_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00065
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	4420	4677	.	-	0	ID=cds-TMQ40972.1;Parent=gene-AO053_00065;Dbxref=NCBI_GP:TMQ40972.1;Name=TMQ40972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMW1.1;locus_tag=AO053_00065;product=hypothetical protein;protein_id=TMQ40972.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	4767	5153	.	-	.	ID=gene-AO053_00070;Name=AO053_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00070
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	4767	5153	.	-	0	ID=cds-TMQ40973.1;Parent=gene-AO053_00070;Dbxref=NCBI_GP:TMQ40973.1;Name=TMQ40973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692969.1;locus_tag=AO053_00070;product=large-conductance mechanosensitive channel MscL;protein_id=TMQ40973.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	5227	6603	.	-	.	ID=gene-AO053_00075;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=AO053_00075
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	5227	6603	.	-	0	ID=cds-TMQ40974.1;Parent=gene-AO053_00075;Dbxref=NCBI_GP:TMQ40974.1;Name=TMQ40974.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:SwissProt:P71354.1;locus_tag=AO053_00075;product=potassium transporter peripheral membrane component;protein_id=TMQ40974.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	6616	7971	.	-	.	ID=gene-AO053_00080;Name=AO053_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00080
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	6616	7971	.	-	0	ID=cds-TMQ40975.1;Parent=gene-AO053_00080;Dbxref=NCBI_GP:TMQ40975.1;Name=TMQ40975.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44788.1;locus_tag=AO053_00080;product=16S rRNA methyltransferase;protein_id=TMQ40975.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	7971	8927	.	-	.	ID=gene-AO053_00085;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AO053_00085
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	7971	8927	.	-	0	ID=cds-TMQ40976.1;Parent=gene-AO053_00085;Dbxref=NCBI_GP:TMQ40976.1;Name=TMQ40976.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658672.1;locus_tag=AO053_00085;product=methionyl-tRNA formyltransferase;protein_id=TMQ40976.1;transl_table=11
GCA_005888185.1|LNKP01000002.1	Genbank	gene	9003	9512	.	-	.	ID=gene-AO053_00090;Name=AO053_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00090
GCA_005888185.1|LNKP01000002.1	Protein Homology	CDS	9003	9512	.	-	0	ID=cds-TMQ40977.1;Parent=gene-AO053_00090;Dbxref=NCBI_GP:TMQ40977.1;Name=TMQ40977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658670.1;locus_tag=AO053_00090;product=peptide deformylase;protein_id=TMQ40977.1;transl_table=11
##sequence-region LNKP01000003.1 1 27871
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000003.1	Genbank	region	1	27871	.	+	.	ID=LNKP01000003.1:1..27871;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000003.1	Genbank	gene	254	808	.	-	.	ID=gene-AO053_00095;Name=AO053_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00095
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	254	808	.	-	0	ID=cds-TMQ40925.1;Parent=gene-AO053_00095;Dbxref=NCBI_GP:TMQ40925.1;Name=TMQ40925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526310.1;locus_tag=AO053_00095;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=TMQ40925.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	984	2021	.	+	.	ID=gene-AO053_00100;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=AO053_00100
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	984	2021	.	+	0	ID=cds-TMQ40926.1;Parent=gene-AO053_00100;Dbxref=NCBI_GP:TMQ40926.1;Name=TMQ40926.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692764.1;locus_tag=AO053_00100;product=DL-methionine transporter ATP-binding subunit;protein_id=TMQ40926.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	2011	2700	.	+	.	ID=gene-AO053_00105;Name=AO053_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00105
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	2011	2700	.	+	0	ID=cds-TMQ40927.1;Parent=gene-AO053_00105;Dbxref=NCBI_GP:TMQ40927.1;Name=TMQ40927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648554.1;locus_tag=AO053_00105;product=methionine ABC transporter permease;protein_id=TMQ40927.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	2739	3560	.	+	.	ID=gene-AO053_00110;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=AO053_00110
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	2739	3560	.	+	0	ID=cds-TMQ40928.1;Parent=gene-AO053_00110;Dbxref=NCBI_GP:TMQ40928.1;Name=TMQ40928.1;gbkey=CDS;gene=metQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500267.1;locus_tag=AO053_00110;product=DL-methionine transporter substrate-binding subunit;protein_id=TMQ40928.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	3862	4629	.	-	.	ID=gene-AO053_00115;Name=AO053_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00115
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	3862	4629	.	-	0	ID=cds-TMQ40929.1;Parent=gene-AO053_00115;Dbxref=NCBI_GP:TMQ40929.1;Name=TMQ40929.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688247.1;locus_tag=AO053_00115;product=transcriptional regulator;protein_id=TMQ40929.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	4659	5237	.	-	.	ID=gene-AO053_00120;Name=AO053_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00120
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	4659	5237	.	-	0	ID=cds-TMQ40930.1;Parent=gene-AO053_00120;Dbxref=NCBI_GP:TMQ40930.1;Name=TMQ40930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633082.1;locus_tag=AO053_00120;product=rhomboid family intramembrane serine protease;protein_id=TMQ40930.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	5264	5923	.	-	.	ID=gene-AO053_00125;Name=AO053_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00125
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	5264	5923	.	-	0	ID=cds-TMQ40931.1;Parent=gene-AO053_00125;Dbxref=NCBI_GP:TMQ40931.1;Name=TMQ40931.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500445.1;locus_tag=AO053_00125;product=23S rRNA pseudouridylate synthase;protein_id=TMQ40931.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	5926	8697	.	-	.	ID=gene-AO053_00130;Name=AO053_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00130
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	5926	8697	.	-	0	ID=cds-TMQ40932.1;Parent=gene-AO053_00130;Dbxref=NCBI_GP:TMQ40932.1;Name=TMQ40932.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526314.1;locus_tag=AO053_00130;product=RNA polymerase-associated protein RapA;protein_id=TMQ40932.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	8891	9640	.	+	.	ID=gene-AO053_00135;Name=AO053_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00135
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	8891	9640	.	+	0	ID=cds-TMQ40933.1;Parent=gene-AO053_00135;Dbxref=NCBI_GP:TMQ40933.1;Name=TMQ40933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665097.1;locus_tag=AO053_00135;product=DeoR family transcriptional regulator;protein_id=TMQ40933.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	9870	11639	.	+	.	ID=gene-AO053_00140;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=AO053_00140
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	9870	11639	.	+	0	ID=cds-TMQ40934.1;Parent=gene-AO053_00140;Dbxref=NCBI_GP:TMQ40934.1;Name=TMQ40934.1;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;gbkey=CDS;gene=fucI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526315.1;locus_tag=AO053_00140;product=L-fucose isomerase;protein_id=TMQ40934.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	11713	13125	.	+	.	ID=gene-AO053_00145;Name=AO053_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00145
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	11713	13125	.	+	0	ID=cds-TMQ40935.1;Parent=gene-AO053_00145;Dbxref=NCBI_GP:TMQ40935.1;Name=TMQ40935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272192.1;locus_tag=AO053_00145;product=L-fuculose kinase;protein_id=TMQ40935.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	13139	13573	.	+	.	ID=gene-AO053_00150;Name=AO053_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00150
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	13139	13573	.	+	0	ID=cds-TMQ40936.1;Parent=gene-AO053_00150;Dbxref=NCBI_GP:TMQ40936.1;Name=TMQ40936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661544.1;locus_tag=AO053_00150;product=fucose isomerase;protein_id=TMQ40936.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	13593	14243	.	+	.	ID=gene-AO053_00155;Name=AO053_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00155
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	13593	14243	.	+	0	ID=cds-TMQ40937.1;Parent=gene-AO053_00155;Dbxref=NCBI_GP:TMQ40937.1;Name=TMQ40937.1;Note=catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658574.1;locus_tag=AO053_00155;product=L-fuculose phosphate aldolase;protein_id=TMQ40937.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	14282	15568	.	+	.	ID=gene-AO053_00160;Name=AO053_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00160
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	14282	15568	.	+	0	ID=cds-TMQ40938.1;Parent=gene-AO053_00160;Dbxref=NCBI_GP:TMQ40938.1;Name=TMQ40938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272191.1;locus_tag=AO053_00160;product=MFS transporter;protein_id=TMQ40938.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	15714	15790	.	-	.	ID=gene-AO053_00165;Name=AO053_00165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00165
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	tRNA	15714	15790	.	-	.	ID=rna-AO053_00165;Parent=gene-AO053_00165;anticodon=(pos:complement(15754..15756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00165;product=tRNA-Arg
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	exon	15714	15790	.	-	.	ID=exon-AO053_00165-1;Parent=rna-AO053_00165;anticodon=(pos:complement(15754..15756));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00165;product=tRNA-Arg
GCA_005888185.1|LNKP01000003.1	Genbank	gene	15838	15914	.	-	.	ID=gene-AO053_00170;Name=AO053_00170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00170
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	tRNA	15838	15914	.	-	.	ID=rna-AO053_00170;Parent=gene-AO053_00170;anticodon=(pos:complement(15878..15880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00170;product=tRNA-Pro
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	exon	15838	15914	.	-	.	ID=exon-AO053_00170-1;Parent=rna-AO053_00170;anticodon=(pos:complement(15878..15880));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00170;product=tRNA-Pro
GCA_005888185.1|LNKP01000003.1	Genbank	gene	16096	16944	.	+	.	ID=gene-AO053_00175;Name=AO053_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00175
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	16096	16944	.	+	0	ID=cds-TMQ40939.1;Parent=gene-AO053_00175;Dbxref=NCBI_GP:TMQ40939.1;Name=TMQ40939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701765.1;locus_tag=AO053_00175;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=TMQ40939.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	17082	18467	.	-	.	ID=gene-AO053_00180;Name=AO053_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00180
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	17082	18467	.	-	0	ID=cds-TMQ40940.1;Parent=gene-AO053_00180;Dbxref=NCBI_GP:TMQ40940.1;Name=TMQ40940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995374.1;locus_tag=AO053_00180;product=transporter;protein_id=TMQ40940.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	18606	19421	.	-	.	ID=gene-AO053_00185;Name=AO053_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00185
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	18606	19421	.	-	0	ID=cds-TMQ40941.1;Parent=gene-AO053_00185;Dbxref=NCBI_GP:TMQ40941.1;Name=TMQ40941.1;Note=catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658585.1;locus_tag=AO053_00185;product=shikimate dehydrogenase;protein_id=TMQ40941.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	19431	20234	.	-	.	ID=gene-AO053_00190;Name=AO053_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00190
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	19431	20234	.	-	0	ID=cds-TMQ40942.1;Parent=gene-AO053_00190;Dbxref=NCBI_GP:TMQ40942.1;Name=TMQ40942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550529.1;locus_tag=AO053_00190;product=serine acetyltransferase;protein_id=TMQ40942.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	20251	21258	.	-	.	ID=gene-AO053_00195;Name=AO053_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00195
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	20251	21258	.	-	0	ID=cds-TMQ40943.1;Parent=gene-AO053_00195;Dbxref=NCBI_GP:TMQ40943.1;Name=TMQ40943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995372.1;locus_tag=AO053_00195;product=glycerol-3-phosphate dehydrogenase;protein_id=TMQ40943.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	21332	23863	.	-	.	ID=gene-AO053_00200;Name=AO053_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00200
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	21332	23863	.	-	0	ID=cds-TMQ40944.1;Parent=gene-AO053_00200;Dbxref=NCBI_GP:TMQ40944.1;Name=TMQ40944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995371.1;locus_tag=AO053_00200;product=adenylate cyclase;protein_id=TMQ40944.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	24168	25379	.	+	.	ID=gene-AO053_00205;Name=AO053_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00205
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	24168	25379	.	+	0	ID=cds-TMQ40945.1;Parent=gene-AO053_00205;Dbxref=NCBI_GP:TMQ40945.1;Name=TMQ40945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648591.1;locus_tag=AO053_00205;product=HemX protein;protein_id=TMQ40945.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	25390	26676	.	+	.	ID=gene-AO053_00210;Name=AO053_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00210
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	25390	26676	.	+	0	ID=cds-TMQ40946.1;Parent=gene-AO053_00210;Dbxref=NCBI_GP:TMQ40946.1;Name=TMQ40946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701760.1;locus_tag=AO053_00210;product=heme biosynthesis protein HemY;protein_id=TMQ40946.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	26740	27159	.	-	.	ID=gene-AO053_00215;Name=AO053_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00215
GCA_005888185.1|LNKP01000003.1	Protein Homology	CDS	26740	27159	.	-	0	ID=cds-TMQ40947.1;Parent=gene-AO053_00215;Dbxref=NCBI_GP:TMQ40947.1;Name=TMQ40947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632950.1;locus_tag=AO053_00215;product=phosphate-starvation-inducible protein PsiE;protein_id=TMQ40947.1;transl_table=11
GCA_005888185.1|LNKP01000003.1	Genbank	gene	27428	27503	.	-	.	ID=gene-AO053_00220;Name=AO053_00220;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00220
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	tRNA	27428	27503	.	-	.	ID=rna-AO053_00220;Parent=gene-AO053_00220;anticodon=(pos:complement(27468..27470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00220;product=tRNA-Trp
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	exon	27428	27503	.	-	.	ID=exon-AO053_00220-1;Parent=rna-AO053_00220;anticodon=(pos:complement(27468..27470));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00220;product=tRNA-Trp
GCA_005888185.1|LNKP01000003.1	Genbank	gene	27532	27608	.	-	.	ID=gene-AO053_00225;Name=AO053_00225;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00225
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	tRNA	27532	27608	.	-	.	ID=rna-AO053_00225;Parent=gene-AO053_00225;anticodon=(pos:complement(27572..27574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00225;product=tRNA-Asp
GCA_005888185.1|LNKP01000003.1	tRNAscan-SE	exon	27532	27608	.	-	.	ID=exon-AO053_00225-1;Parent=rna-AO053_00225;anticodon=(pos:complement(27572..27574));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00225;product=tRNA-Asp
GCA_005888185.1|LNKP01000003.1	Genbank	gene	27621	27736	.	-	.	ID=gene-AO053_00230;Name=AO053_00230;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO053_00230
GCA_005888185.1|LNKP01000003.1	cmsearch	rRNA	27621	27736	.	-	.	ID=rna-AO053_00230;Parent=gene-AO053_00230;gbkey=rRNA;locus_tag=AO053_00230;product=5S ribosomal RNA
GCA_005888185.1|LNKP01000003.1	cmsearch	exon	27621	27736	.	-	.	ID=exon-AO053_00230-1;Parent=rna-AO053_00230;gbkey=rRNA;locus_tag=AO053_00230;product=5S ribosomal RNA
##sequence-region LNKP01000004.1 1 26094
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000004.1	Genbank	region	1	26094	.	+	.	ID=LNKP01000004.1:1..26094;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000004.1	Genbank	gene	501	1517	.	-	.	ID=gene-AO053_00235;Name=AO053_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00235
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	501	1517	.	-	0	ID=cds-TMQ40891.1;Parent=gene-AO053_00235;Dbxref=NCBI_GP:TMQ40891.1;Name=TMQ40891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638152.1;locus_tag=AO053_00235;product=replication protein;protein_id=TMQ40891.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	2028	2249	.	+	.	ID=gene-AO053_00240;Name=AO053_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00240
GCA_005888185.1|LNKP01000004.1	GeneMarkS+	CDS	2028	2249	.	+	0	ID=cds-TMQ40892.1;Parent=gene-AO053_00240;Dbxref=NCBI_GP:TMQ40892.1;Name=TMQ40892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_00240;product=hypothetical protein;protein_id=TMQ40892.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	2246	2566	.	+	.	ID=gene-AO053_00245;Name=AO053_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00245
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	2246	2566	.	+	0	ID=cds-TMQ40893.1;Parent=gene-AO053_00245;Dbxref=NCBI_GP:TMQ40893.1;Name=TMQ40893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005765071.1;locus_tag=AO053_00245;product=hypothetical protein;protein_id=TMQ40893.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	2677	3360	.	+	.	ID=gene-AO053_00250;Name=AO053_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00250
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	2677	3360	.	+	0	ID=cds-TMQ40894.1;Parent=gene-AO053_00250;Dbxref=NCBI_GP:TMQ40894.1;Name=TMQ40894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012443161.1;locus_tag=AO053_00250;product=hypothetical protein;protein_id=TMQ40894.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	3379	3693	.	+	.	ID=gene-AO053_00255;Name=AO053_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00255
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	3379	3693	.	+	0	ID=cds-TMQ40895.1;Parent=gene-AO053_00255;Dbxref=NCBI_GP:TMQ40895.1;Name=TMQ40895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642524.1;locus_tag=AO053_00255;product=conjugal transfer protein TraC;protein_id=TMQ40895.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	3777	4133	.	+	.	ID=gene-AO053_00260;Name=AO053_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00260
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	3777	4133	.	+	0	ID=cds-TMQ40896.1;Parent=gene-AO053_00260;Dbxref=NCBI_GP:TMQ40896.1;Name=TMQ40896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000362081.1;locus_tag=AO053_00260;product=hypothetical protein;protein_id=TMQ40896.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	4105	6528	.	+	.	ID=gene-AO053_00265;Name=AO053_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00265
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	4105	6528	.	+	0	ID=cds-TMQ40897.1;Parent=gene-AO053_00265;Dbxref=NCBI_GP:TMQ40897.1;Name=TMQ40897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642520.1;locus_tag=AO053_00265;product=conjugal transfer protein TraE;protein_id=TMQ40897.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	6544	7242	.	+	.	ID=gene-AO053_00270;Name=AO053_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00270
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	6544	7242	.	+	0	ID=cds-TMQ40898.1;Parent=gene-AO053_00270;Dbxref=NCBI_GP:TMQ40898.1;Name=TMQ40898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638116.1;locus_tag=AO053_00270;product=hypothetical protein;protein_id=TMQ40898.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	7269	8264	.	+	.	ID=gene-AO053_00275;Name=AO053_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00275
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	7269	8264	.	+	0	ID=cds-TMQ40899.1;Parent=gene-AO053_00275;Dbxref=NCBI_GP:TMQ40899.1;Name=TMQ40899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001028543.1;locus_tag=AO053_00275;product=hypothetical protein;protein_id=TMQ40899.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	8446	9219	.	+	.	ID=gene-AO053_00280;Name=AO053_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00280
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	8446	9219	.	+	0	ID=cds-TMQ40900.1;Parent=gene-AO053_00280;Dbxref=NCBI_GP:TMQ40900.1;Name=TMQ40900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638118.1;locus_tag=AO053_00280;product=conjugal transfer protein TraG;protein_id=TMQ40900.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	9226	10002	.	+	.	ID=gene-AO053_00285;Name=AO053_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00285
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	9226	10002	.	+	0	ID=cds-TMQ40901.1;Parent=gene-AO053_00285;Dbxref=NCBI_GP:TMQ40901.1;Name=TMQ40901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642450.1;locus_tag=AO053_00285;product=conjugal transfer protein TraH;protein_id=TMQ40901.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	9995	11173	.	+	.	ID=gene-AO053_00290;Name=AO053_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00290
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	9995	11173	.	+	0	ID=cds-TMQ40902.1;Parent=gene-AO053_00290;Dbxref=NCBI_GP:TMQ40902.1;Name=TMQ40902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638120.1;locus_tag=AO053_00290;product=conjugal transfer protein TraF;protein_id=TMQ40902.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	11188	12246	.	+	.	ID=gene-AO053_00295;Name=AO053_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00295
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	11188	12246	.	+	0	ID=cds-TMQ40903.1;Parent=gene-AO053_00295;Dbxref=NCBI_GP:TMQ40903.1;Name=TMQ40903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638121.1;locus_tag=AO053_00295;product=secretion system protein E;protein_id=TMQ40903.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	12256	14088	.	+	.	ID=gene-AO053_00300;Name=AO053_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00300
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	12256	14088	.	+	0	ID=cds-TMQ40904.1;Parent=gene-AO053_00300;Dbxref=NCBI_GP:TMQ40904.1;Name=TMQ40904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642458.1;locus_tag=AO053_00300;product=conjugal transfer protein TraK;protein_id=TMQ40904.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	14099	14752	.	+	.	ID=gene-AO053_00305;Name=AO053_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00305
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	14099	14752	.	+	0	ID=cds-TMQ40905.1;Parent=gene-AO053_00305;Dbxref=NCBI_GP:TMQ40905.1;Name=TMQ40905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638123.1;locus_tag=AO053_00305;product=hypothetical protein;protein_id=TMQ40905.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	14913	15338	.	+	.	ID=gene-AO053_00310;Name=AO053_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00310
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	14913	15338	.	+	0	ID=cds-TMQ40906.1;Parent=gene-AO053_00310;Dbxref=NCBI_GP:TMQ40906.1;Name=TMQ40906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642463.1;locus_tag=AO053_00310;product=single-stranded DNA-binding protein;protein_id=TMQ40906.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	15391	17643	.	+	.	ID=gene-AO053_00315;Name=AO053_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00315
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	15391	17643	.	+	0	ID=cds-TMQ40907.1;Parent=gene-AO053_00315;Dbxref=NCBI_GP:TMQ40907.1;Name=TMQ40907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638126.1;locus_tag=AO053_00315;product=conjugal transfer protein TraE;protein_id=TMQ40907.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	17679	18161	.	-	.	ID=gene-AO053_00320;Name=AO053_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00320
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	17679	18161	.	-	0	ID=cds-TMQ40916.1;Parent=gene-AO053_00320;Dbxref=NCBI_GP:TMQ40916.1;Name=TMQ40916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341635.1;locus_tag=AO053_00320;product=hypothetical protein;protein_id=TMQ40916.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	18348	21710	.	-	.	ID=gene-AO053_00325;Name=AO053_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00325
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	18348	21710	.	-	0	ID=cds-TMQ40908.1;Parent=gene-AO053_00325;Dbxref=NCBI_GP:TMQ40908.1;Name=TMQ40908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000961028.1;locus_tag=AO053_00325;product=hypothetical protein;protein_id=TMQ40908.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	21700	22047	.	-	.	ID=gene-AO053_00330;Name=AO053_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00330
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	21700	22047	.	-	0	ID=cds-TMQ40909.1;Parent=gene-AO053_00330;Dbxref=NCBI_GP:TMQ40909.1;Name=TMQ40909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638131.1;locus_tag=AO053_00330;product=relaxosome protein;protein_id=TMQ40909.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	22472	22939	.	+	.	ID=gene-AO053_00335;Name=AO053_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00335
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	22472	22939	.	+	0	ID=cds-TMQ40910.1;Parent=gene-AO053_00335;Dbxref=NCBI_GP:TMQ40910.1;Name=TMQ40910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638133.1;locus_tag=AO053_00335;product=hypothetical protein;protein_id=TMQ40910.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	22942	23694	.	+	.	ID=gene-AO053_00340;Name=AO053_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00340
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	22942	23694	.	+	0	ID=cds-TMQ40911.1;Parent=gene-AO053_00340;Dbxref=NCBI_GP:TMQ40911.1;Name=TMQ40911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642469.1;locus_tag=AO053_00340;product=conjugal transfer protein TraL;protein_id=TMQ40911.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	23932	24666	.	+	.	ID=gene-AO053_00345;Name=AO053_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00345
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	23932	24666	.	+	0	ID=cds-TMQ40912.1;Parent=gene-AO053_00345;Dbxref=NCBI_GP:TMQ40912.1;Name=TMQ40912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638136.1;locus_tag=AO053_00345;product=hypothetical protein;protein_id=TMQ40912.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	24669	24989	.	+	.	ID=gene-AO053_00350;Name=AO053_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00350
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	24669	24989	.	+	0	ID=cds-TMQ40913.1;Parent=gene-AO053_00350;Dbxref=NCBI_GP:TMQ40913.1;Name=TMQ40913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638137.1;locus_tag=AO053_00350;product=hypothetical protein;protein_id=TMQ40913.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	25084	25296	.	-	.	ID=gene-AO053_00355;Name=AO053_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00355
GCA_005888185.1|LNKP01000004.1	GeneMarkS+	CDS	25084	25296	.	-	0	ID=cds-TMQ40914.1;Parent=gene-AO053_00355;Dbxref=NCBI_GP:TMQ40914.1;Name=TMQ40914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_00355;product=hypothetical protein;protein_id=TMQ40914.1;transl_table=11
GCA_005888185.1|LNKP01000004.1	Genbank	gene	25502	26014	.	-	.	ID=gene-AO053_00360;Name=AO053_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00360
GCA_005888185.1|LNKP01000004.1	Protein Homology	CDS	25502	26014	.	-	0	ID=cds-TMQ40915.1;Parent=gene-AO053_00360;Dbxref=NCBI_GP:TMQ40915.1;Name=TMQ40915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006816365.1;locus_tag=AO053_00360;product=molecular chaperone DnaJ;protein_id=TMQ40915.1;transl_table=11
##sequence-region LNKP01000005.1 1 3582
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000005.1	Genbank	region	1	3582	.	+	.	ID=LNKP01000005.1:1..3582;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000005.1	Genbank	gene	1	104	.	-	.	ID=gene-AO053_00365;Name=AO053_00365;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO053_00365;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000005.1	cmsearch	rRNA	1	104	.	-	.	ID=rna-AO053_00365;Parent=gene-AO053_00365;gbkey=rRNA;locus_tag=AO053_00365;partial=true;product=5S ribosomal RNA;start_range=.,1
GCA_005888185.1|LNKP01000005.1	cmsearch	exon	1	104	.	-	.	ID=exon-AO053_00365-1;Parent=rna-AO053_00365;gbkey=rRNA;locus_tag=AO053_00365;partial=true;product=5S ribosomal RNA;start_range=.,1
GCA_005888185.1|LNKP01000005.1	Genbank	gene	319	3347	.	-	.	ID=gene-AO053_00370;Name=AO053_00370;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO053_00370
GCA_005888185.1|LNKP01000005.1	Genbank	rRNA	319	3347	.	-	.	ID=rna-AO053_00370;Parent=gene-AO053_00370;gbkey=rRNA;locus_tag=AO053_00370;product=23S ribosomal RNA
GCA_005888185.1|LNKP01000005.1	Genbank	exon	319	3347	.	-	.	ID=exon-AO053_00370-1;Parent=rna-AO053_00370;gbkey=rRNA;locus_tag=AO053_00370;product=23S ribosomal RNA
##sequence-region LNKP01000006.1 1 4370
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000006.1	Genbank	region	1	4370	.	+	.	ID=LNKP01000006.1:1..4370;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000006.1	Genbank	gene	1	337	.	-	.	ID=gene-AO053_00375;Name=AO053_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00375;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	1	337	.	-	0	ID=cds-TMQ40869.1;Parent=gene-AO053_00375;Dbxref=NCBI_GP:TMQ40869.1;Name=TMQ40869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690062.1;locus_tag=AO053_00375;partial=true;product=hypothetical protein;protein_id=TMQ40869.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	pseudogene	744	941	.	-	.	ID=gene-AO053_00380;Name=AO053_00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00380;pseudo=true
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	744	941	.	-	0	ID=cds-AO053_00380;Parent=gene-AO053_00380;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646950.1;locus_tag=AO053_00380;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	gene	925	1356	.	-	.	ID=gene-AO053_00385;Name=AO053_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00385
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	925	1356	.	-	0	ID=cds-TMQ40870.1;Parent=gene-AO053_00385;Dbxref=NCBI_GP:TMQ40870.1;Name=TMQ40870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688547.1;locus_tag=AO053_00385;product=hypothetical protein;protein_id=TMQ40870.1;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	gene	1366	1701	.	-	.	ID=gene-AO053_00390;Name=AO053_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00390
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	1366	1701	.	-	0	ID=cds-TMQ40871.1;Parent=gene-AO053_00390;Dbxref=NCBI_GP:TMQ40871.1;Name=TMQ40871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526154.1;locus_tag=AO053_00390;product=hypothetical protein;protein_id=TMQ40871.1;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	gene	1737	2657	.	-	.	ID=gene-AO053_00395;Name=AO053_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00395
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	1737	2657	.	-	0	ID=cds-TMQ40872.1;Parent=gene-AO053_00395;Dbxref=NCBI_GP:TMQ40872.1;Name=TMQ40872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526155.1;locus_tag=AO053_00395;product=head protein;protein_id=TMQ40872.1;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	gene	2657	3661	.	-	.	ID=gene-AO053_00400;Name=AO053_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00400
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	2657	3661	.	-	0	ID=cds-TMQ40873.1;Parent=gene-AO053_00400;Dbxref=NCBI_GP:TMQ40873.1;Name=TMQ40873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647097.1;locus_tag=AO053_00400;product=I protein;protein_id=TMQ40873.1;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	pseudogene	3648	3887	.	-	.	ID=gene-AO053_00405;Name=AO053_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00405;pseudo=true
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	3648	3887	.	-	0	ID=cds-AO053_00405;Parent=gene-AO053_00405;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526157.1;locus_tag=AO053_00405;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000006.1	Genbank	pseudogene	4030	4370	.	-	.	ID=gene-AO053_00410;Name=AO053_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00410;pseudo=true
GCA_005888185.1|LNKP01000006.1	Protein Homology	CDS	4030	4370	.	-	2	ID=cds-AO053_00410;Parent=gene-AO053_00410;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655294.1;locus_tag=AO053_00410;pseudo=true;transl_table=11
##sequence-region LNKP01000007.1 1 6444
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000007.1	Genbank	region	1	6444	.	+	.	ID=LNKP01000007.1:1..6444;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000007.1	Genbank	gene	56	706	.	-	.	ID=gene-AO053_00415;Name=AO053_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00415
GCA_005888185.1|LNKP01000007.1	Protein Homology	CDS	56	706	.	-	0	ID=cds-TMQ40817.1;Parent=gene-AO053_00415;Dbxref=NCBI_GP:TMQ40817.1;Name=TMQ40817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525980.1;locus_tag=AO053_00415;product=fimbrial protein;protein_id=TMQ40817.1;transl_table=11
GCA_005888185.1|LNKP01000007.1	Genbank	gene	1177	1875	.	+	.	ID=gene-AO053_00420;Name=AO053_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00420
GCA_005888185.1|LNKP01000007.1	Protein Homology	CDS	1177	1875	.	+	0	ID=cds-TMQ40818.1;Parent=gene-AO053_00420;Dbxref=NCBI_GP:TMQ40818.1;Name=TMQ40818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525979.1;locus_tag=AO053_00420;product=molecular chaperone;protein_id=TMQ40818.1;transl_table=11
GCA_005888185.1|LNKP01000007.1	Genbank	gene	2005	4518	.	+	.	ID=gene-AO053_00425;Name=AO053_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00425
GCA_005888185.1|LNKP01000007.1	Protein Homology	CDS	2005	4518	.	+	0	ID=cds-TMQ40819.1;Parent=gene-AO053_00425;Dbxref=NCBI_GP:TMQ40819.1;Name=TMQ40819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527766.1;locus_tag=AO053_00425;product=usher protein;protein_id=TMQ40819.1;transl_table=11
GCA_005888185.1|LNKP01000007.1	Genbank	gene	4532	5197	.	+	.	ID=gene-AO053_00430;Name=AO053_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00430
GCA_005888185.1|LNKP01000007.1	Protein Homology	CDS	4532	5197	.	+	0	ID=cds-TMQ40820.1;Parent=gene-AO053_00430;Dbxref=NCBI_GP:TMQ40820.1;Name=TMQ40820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525977.1;locus_tag=AO053_00430;product=fimbrial protein;protein_id=TMQ40820.1;transl_table=11
GCA_005888185.1|LNKP01000007.1	Genbank	gene	5221	6444	.	+	.	ID=gene-AO053_00435;Name=AO053_00435;end_range=6444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00435;partial=true
GCA_005888185.1|LNKP01000007.1	Protein Homology	CDS	5221	6444	.	+	0	ID=cds-TMQ40821.1;Parent=gene-AO053_00435;Dbxref=NCBI_GP:TMQ40821.1;Name=TMQ40821.1;end_range=6444,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525976.1;locus_tag=AO053_00435;partial=true;product=pilus assembly protein PilC;protein_id=TMQ40821.1;transl_table=11
##sequence-region LNKP01000008.1 1 27279
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000008.1	Genbank	region	1	27279	.	+	.	ID=LNKP01000008.1:1..27279;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000008.1	Genbank	pseudogene	1	1417	.	-	.	ID=gene-AO053_00440;Name=AO053_00440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00440;pseudo=true
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	1	1417	.	-	0	ID=cds-AO053_00440;Parent=gene-AO053_00440;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527471.1;locus_tag=AO053_00440;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	1427	2041	.	-	.	ID=gene-AO053_00445;Name=AO053_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00445
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	1427	2041	.	-	0	ID=cds-TMQ40766.1;Parent=gene-AO053_00445;Dbxref=NCBI_GP:TMQ40766.1;Name=TMQ40766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692550.1;locus_tag=AO053_00445;product=hypothetical protein;protein_id=TMQ40766.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	2050	3486	.	-	.	ID=gene-AO053_00450;Name=AO053_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00450
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	2050	3486	.	-	0	ID=cds-TMQ40767.1;Parent=gene-AO053_00450;Dbxref=NCBI_GP:TMQ40767.1;Name=TMQ40767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272524.1;locus_tag=AO053_00450;product=hypothetical protein;protein_id=TMQ40767.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	3479	3844	.	-	.	ID=gene-AO053_00455;Name=AO053_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00455
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	3479	3844	.	-	0	ID=cds-TMQ40768.1;Parent=gene-AO053_00455;Dbxref=NCBI_GP:TMQ40768.1;Name=TMQ40768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651178.1;locus_tag=AO053_00455;product=hypothetical protein;protein_id=TMQ40768.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	3841	4512	.	-	.	ID=gene-AO053_00460;Name=AO053_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00460
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	3841	4512	.	-	0	ID=cds-TMQ40769.1;Parent=gene-AO053_00460;Dbxref=NCBI_GP:TMQ40769.1;Name=TMQ40769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525583.1;locus_tag=AO053_00460;product=phage baseplate protein;protein_id=TMQ40769.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	4509	5471	.	-	.	ID=gene-AO053_00465;Name=AO053_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00465
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	4509	5471	.	-	0	ID=cds-TMQ40770.1;Parent=gene-AO053_00465;Dbxref=NCBI_GP:TMQ40770.1;Name=TMQ40770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525584.1;locus_tag=AO053_00465;product=hypothetical protein;protein_id=TMQ40770.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	5468	5782	.	-	.	ID=gene-AO053_00470;Name=AO053_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00470
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	5468	5782	.	-	0	ID=cds-TMQ40771.1;Parent=gene-AO053_00470;Dbxref=NCBI_GP:TMQ40771.1;Name=TMQ40771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688901.1;locus_tag=AO053_00470;product=hypothetical protein;protein_id=TMQ40771.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	5779	6360	.	-	.	ID=gene-AO053_00475;Name=AO053_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00475
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	5779	6360	.	-	0	ID=cds-TMQ40772.1;Parent=gene-AO053_00475;Dbxref=NCBI_GP:TMQ40772.1;Name=TMQ40772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688900.1;locus_tag=AO053_00475;product=hypothetical protein;protein_id=TMQ40772.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	6522	7244	.	+	.	ID=gene-AO053_00480;Name=AO053_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00480
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	6522	7244	.	+	0	ID=cds-TMQ40773.1;Parent=gene-AO053_00480;Dbxref=NCBI_GP:TMQ40773.1;Name=TMQ40773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527470.1;locus_tag=AO053_00480;product=hypothetical protein;protein_id=TMQ40773.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	7319	9736	.	-	.	ID=gene-AO053_00485;Name=AO053_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00485
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	7319	9736	.	-	0	ID=cds-TMQ40774.1;Parent=gene-AO053_00485;Dbxref=NCBI_GP:TMQ40774.1;Name=TMQ40774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272518.1;locus_tag=AO053_00485;product=phage tail protein;protein_id=TMQ40774.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	9921	10403	.	-	.	ID=gene-AO053_00490;Name=AO053_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00490
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	9921	10403	.	-	0	ID=cds-TMQ40775.1;Parent=gene-AO053_00490;Dbxref=NCBI_GP:TMQ40775.1;Name=TMQ40775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525589.1;locus_tag=AO053_00490;product=hypothetical protein;protein_id=TMQ40775.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	10403	10828	.	-	.	ID=gene-AO053_00495;Name=AO053_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00495
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	10403	10828	.	-	0	ID=cds-TMQ40776.1;Parent=gene-AO053_00495;Dbxref=NCBI_GP:TMQ40776.1;Name=TMQ40776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643344.1;locus_tag=AO053_00495;product=hypothetical protein;protein_id=TMQ40776.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	10874	11947	.	-	.	ID=gene-AO053_00500;Name=AO053_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00500
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	10874	11947	.	-	0	ID=cds-TMQ40777.1;Parent=gene-AO053_00500;Dbxref=NCBI_GP:TMQ40777.1;Name=TMQ40777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272516.1;locus_tag=AO053_00500;product=hypothetical protein;protein_id=TMQ40777.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	11934	12443	.	-	.	ID=gene-AO053_00505;Name=AO053_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00505
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	11934	12443	.	-	0	ID=cds-TMQ40778.1;Parent=gene-AO053_00505;Dbxref=NCBI_GP:TMQ40778.1;Name=TMQ40778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651165.1;locus_tag=AO053_00505;product=hypothetical protein;protein_id=TMQ40778.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	12445	12804	.	-	.	ID=gene-AO053_00510;Name=AO053_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00510
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	12445	12804	.	-	0	ID=cds-TMQ40779.1;Parent=gene-AO053_00510;Dbxref=NCBI_GP:TMQ40779.1;Name=TMQ40779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525592.1;locus_tag=AO053_00510;product=hypothetical protein;protein_id=TMQ40779.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	12804	13262	.	-	.	ID=gene-AO053_00515;Name=AO053_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00515
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	12804	13262	.	-	0	ID=cds-TMQ40780.1;Parent=gene-AO053_00515;Dbxref=NCBI_GP:TMQ40780.1;Name=TMQ40780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995051.1;locus_tag=AO053_00515;product=hypothetical protein;protein_id=TMQ40780.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	13255	13605	.	-	.	ID=gene-AO053_00520;Name=AO053_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00520
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	13255	13605	.	-	0	ID=cds-TMQ40781.1;Parent=gene-AO053_00520;Dbxref=NCBI_GP:TMQ40781.1;Name=TMQ40781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643354.1;locus_tag=AO053_00520;product=hypothetical protein;protein_id=TMQ40781.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	13609	13797	.	-	.	ID=gene-AO053_00525;Name=AO053_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00525
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	13609	13797	.	-	0	ID=cds-TMQ40782.1;Parent=gene-AO053_00525;Dbxref=NCBI_GP:TMQ40782.1;Name=TMQ40782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995053.1;locus_tag=AO053_00525;product=hypothetical protein;protein_id=TMQ40782.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	13800	14801	.	-	.	ID=gene-AO053_00530;Name=AO053_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00530
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	13800	14801	.	-	0	ID=cds-TMQ40783.1;Parent=gene-AO053_00530;Dbxref=NCBI_GP:TMQ40783.1;Name=TMQ40783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995054.1;locus_tag=AO053_00530;product=DNA-binding protein;protein_id=TMQ40783.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	14809	15228	.	-	.	ID=gene-AO053_00535;Name=AO053_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00535
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	14809	15228	.	-	0	ID=cds-TMQ40784.1;Parent=gene-AO053_00535;Dbxref=NCBI_GP:TMQ40784.1;Name=TMQ40784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525596.1;locus_tag=AO053_00535;product=hypothetical protein;protein_id=TMQ40784.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	15241	16314	.	-	.	ID=gene-AO053_00540;Name=AO053_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00540
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	15241	16314	.	-	0	ID=cds-TMQ40785.1;Parent=gene-AO053_00540;Dbxref=NCBI_GP:TMQ40785.1;Name=TMQ40785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651153.1;locus_tag=AO053_00540;product=hypothetical protein;protein_id=TMQ40785.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	16440	17657	.	-	.	ID=gene-AO053_00545;Name=AO053_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00545
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	16440	17657	.	-	0	ID=cds-TMQ40786.1;Parent=gene-AO053_00545;Dbxref=NCBI_GP:TMQ40786.1;Name=TMQ40786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692576.1;locus_tag=AO053_00545;product=phage head morphogenesis protein;protein_id=TMQ40786.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	17638	18954	.	-	.	ID=gene-AO053_00550;Name=AO053_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00550
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	17638	18954	.	-	0	ID=cds-TMQ40787.1;Parent=gene-AO053_00550;Dbxref=NCBI_GP:TMQ40787.1;Name=TMQ40787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525598.1;locus_tag=AO053_00550;product=hypothetical protein;protein_id=TMQ40787.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	18956	20305	.	-	.	ID=gene-AO053_00555;Name=AO053_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00555
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	18956	20305	.	-	0	ID=cds-TMQ40788.1;Parent=gene-AO053_00555;Dbxref=NCBI_GP:TMQ40788.1;Name=TMQ40788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525599.1;locus_tag=AO053_00555;product=terminase;protein_id=TMQ40788.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	20286	20654	.	-	.	ID=gene-AO053_00560;Name=AO053_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00560
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	20286	20654	.	-	0	ID=cds-TMQ40789.1;Parent=gene-AO053_00560;Dbxref=NCBI_GP:TMQ40789.1;Name=TMQ40789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651145.1;locus_tag=AO053_00560;product=LuxR family transcriptional regulator;protein_id=TMQ40789.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	20712	20933	.	+	.	ID=gene-AO053_00565;Name=AO053_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00565
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	20712	20933	.	+	0	ID=cds-TMQ40790.1;Parent=gene-AO053_00565;Dbxref=NCBI_GP:TMQ40790.1;Name=TMQ40790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651141.1;locus_tag=AO053_00565;product=hypothetical protein;protein_id=TMQ40790.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	20930	22285	.	-	.	ID=gene-AO053_00570;Name=AO053_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00570
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	20930	22285	.	-	0	ID=cds-TMQ40800.1;Parent=gene-AO053_00570;Dbxref=NCBI_GP:TMQ40800.1;Name=TMQ40800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054986.1;locus_tag=AO053_00570;product=hypothetical protein;protein_id=TMQ40800.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	22297	22527	.	-	.	ID=gene-AO053_00575;Name=AO053_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00575
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	22297	22527	.	-	0	ID=cds-TMQ40791.1;Parent=gene-AO053_00575;Dbxref=NCBI_GP:TMQ40791.1;Name=TMQ40791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651135.1;locus_tag=AO053_00575;product=hypothetical protein;protein_id=TMQ40791.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	22502	22891	.	-	.	ID=gene-AO053_00580;Name=AO053_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00580
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	22502	22891	.	-	0	ID=cds-TMQ40792.1;Parent=gene-AO053_00580;Dbxref=NCBI_GP:TMQ40792.1;Name=TMQ40792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527467.1;locus_tag=AO053_00580;product=hypothetical protein;protein_id=TMQ40792.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	22888	23292	.	-	.	ID=gene-AO053_00585;Name=AO053_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00585
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	22888	23292	.	-	0	ID=cds-TMQ40793.1;Parent=gene-AO053_00585;Dbxref=NCBI_GP:TMQ40793.1;Name=TMQ40793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272505.1;locus_tag=AO053_00585;product=peptidase M15;protein_id=TMQ40793.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	23279	23605	.	-	.	ID=gene-AO053_00590;Name=AO053_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00590
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	23279	23605	.	-	0	ID=cds-TMQ40794.1;Parent=gene-AO053_00590;Dbxref=NCBI_GP:TMQ40794.1;Name=TMQ40794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525603.1;locus_tag=AO053_00590;product=hypothetical protein;protein_id=TMQ40794.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	24028	24996	.	-	.	ID=gene-AO053_00595;Name=AO053_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00595
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	24028	24996	.	-	0	ID=cds-TMQ40795.1;Parent=gene-AO053_00595;Dbxref=NCBI_GP:TMQ40795.1;Name=TMQ40795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527466.1;locus_tag=AO053_00595;product=XRE family transcriptional regulator;protein_id=TMQ40795.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	25130	25336	.	+	.	ID=gene-AO053_00600;Name=AO053_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00600
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	25130	25336	.	+	0	ID=cds-TMQ40796.1;Parent=gene-AO053_00600;Dbxref=NCBI_GP:TMQ40796.1;Name=TMQ40796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995067.1;locus_tag=AO053_00600;product=transcriptional regulator;protein_id=TMQ40796.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	25380	25832	.	+	.	ID=gene-AO053_00605;Name=AO053_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00605
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	25380	25832	.	+	0	ID=cds-TMQ40797.1;Parent=gene-AO053_00605;Dbxref=NCBI_GP:TMQ40797.1;Name=TMQ40797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651123.1;locus_tag=AO053_00605;product=hypothetical protein;protein_id=TMQ40797.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	25878	26111	.	+	.	ID=gene-AO053_00610;Name=AO053_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00610
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	25878	26111	.	+	0	ID=cds-TMQ40798.1;Parent=gene-AO053_00610;Dbxref=NCBI_GP:TMQ40798.1;Name=TMQ40798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525605.1;locus_tag=AO053_00610;product=hypothetical protein;protein_id=TMQ40798.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	gene	26113	26895	.	+	.	ID=gene-AO053_00615;Name=AO053_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00615
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	26113	26895	.	+	0	ID=cds-TMQ40799.1;Parent=gene-AO053_00615;Dbxref=NCBI_GP:TMQ40799.1;Name=TMQ40799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272503.1;locus_tag=AO053_00615;product=DNA-binding protein;protein_id=TMQ40799.1;transl_table=11
GCA_005888185.1|LNKP01000008.1	Genbank	pseudogene	26880	27279	.	+	.	ID=gene-AO053_00620;Name=AO053_00620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00620;pseudo=true
GCA_005888185.1|LNKP01000008.1	Protein Homology	CDS	26880	27279	.	+	0	ID=cds-AO053_00620;Parent=gene-AO053_00620;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525607.1;locus_tag=AO053_00620;pseudo=true;transl_table=11
##sequence-region LNKP01000009.1 1 11756
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000009.1	Genbank	region	1	11756	.	+	.	ID=LNKP01000009.1:1..11756;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000009.1	Genbank	pseudogene	1	238	.	+	.	ID=gene-AO053_00625;Name=AO053_00625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00625;pseudo=true
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	1	238	.	+	1	ID=cds-AO053_00625;Parent=gene-AO053_00625;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525607.1;locus_tag=AO053_00625;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	235	459	.	+	.	ID=gene-AO053_00630;Name=AO053_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00630
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	235	459	.	+	0	ID=cds-TMQ40700.1;Parent=gene-AO053_00630;Dbxref=NCBI_GP:TMQ40700.1;Name=TMQ40700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688841.1;locus_tag=AO053_00630;product=hypothetical protein;protein_id=TMQ40700.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	496	912	.	+	.	ID=gene-AO053_00635;Name=AO053_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00635
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	496	912	.	+	0	ID=cds-TMQ40701.1;Parent=gene-AO053_00635;Dbxref=NCBI_GP:TMQ40701.1;Name=TMQ40701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651114.1;locus_tag=AO053_00635;product=recombinase;protein_id=TMQ40701.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	1005	1592	.	+	.	ID=gene-AO053_00640;Name=AO053_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00640
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	1005	1592	.	+	0	ID=cds-TMQ40702.1;Parent=gene-AO053_00640;Dbxref=NCBI_GP:TMQ40702.1;Name=TMQ40702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651110.1;locus_tag=AO053_00640;product=recombinase NinG;protein_id=TMQ40702.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	1594	1959	.	+	.	ID=gene-AO053_00645;Name=AO053_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00645
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	1594	1959	.	+	0	ID=cds-TMQ40703.1;Parent=gene-AO053_00645;Dbxref=NCBI_GP:TMQ40703.1;Name=TMQ40703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688852.1;locus_tag=AO053_00645;product=RNA polymerase subunit sigma-70;protein_id=TMQ40703.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	1998	2516	.	+	.	ID=gene-AO053_00650;Name=AO053_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00650
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	1998	2516	.	+	0	ID=cds-TMQ40704.1;Parent=gene-AO053_00650;Dbxref=NCBI_GP:TMQ40704.1;Name=TMQ40704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525609.1;locus_tag=AO053_00650;product=hypothetical protein;protein_id=TMQ40704.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	2627	3526	.	+	.	ID=gene-AO053_00655;Name=AO053_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00655
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	2627	3526	.	+	0	ID=cds-TMQ40705.1;Parent=gene-AO053_00655;Dbxref=NCBI_GP:TMQ40705.1;Name=TMQ40705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525610.1;locus_tag=AO053_00655;product=hypothetical protein;protein_id=TMQ40705.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	3685	3870	.	+	.	ID=gene-AO053_00660;Name=AO053_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00660
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	3685	3870	.	+	0	ID=cds-TMQ40706.1;Parent=gene-AO053_00660;Dbxref=NCBI_GP:TMQ40706.1;Name=TMQ40706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643277.1;locus_tag=AO053_00660;product=hypothetical protein;protein_id=TMQ40706.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	4253	4564	.	+	.	ID=gene-AO053_00665;Name=AO053_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00665
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	4253	4564	.	+	0	ID=cds-TMQ40707.1;Parent=gene-AO053_00665;Dbxref=NCBI_GP:TMQ40707.1;Name=TMQ40707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651098.1;locus_tag=AO053_00665;product=hypothetical protein;protein_id=TMQ40707.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	4685	4936	.	+	.	ID=gene-AO053_00670;Name=AO053_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00670
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	4685	4936	.	+	0	ID=cds-TMQ40708.1;Parent=gene-AO053_00670;Dbxref=NCBI_GP:TMQ40708.1;Name=TMQ40708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651097.1;locus_tag=AO053_00670;product=hypothetical protein;protein_id=TMQ40708.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	4926	5957	.	+	.	ID=gene-AO053_00675;Name=AO053_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00675
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	4926	5957	.	+	0	ID=cds-TMQ40709.1;Parent=gene-AO053_00675;Dbxref=NCBI_GP:TMQ40709.1;Name=TMQ40709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054990.1;locus_tag=AO053_00675;product=endonuclease;protein_id=TMQ40709.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	6048	6785	.	+	.	ID=gene-AO053_00680;Name=AO053_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00680
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	6048	6785	.	+	0	ID=cds-TMQ40710.1;Parent=gene-AO053_00680;Dbxref=NCBI_GP:TMQ40710.1;Name=TMQ40710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527463.1;locus_tag=AO053_00680;product=DNA methylase N-4;protein_id=TMQ40710.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	6799	7146	.	+	.	ID=gene-AO053_00685;Name=AO053_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00685
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	6799	7146	.	+	0	ID=cds-TMQ40711.1;Parent=gene-AO053_00685;Dbxref=NCBI_GP:TMQ40711.1;Name=TMQ40711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525614.1;locus_tag=AO053_00685;product=hypothetical protein;protein_id=TMQ40711.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	7143	7436	.	+	.	ID=gene-AO053_00690;Name=AO053_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00690
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	7143	7436	.	+	0	ID=cds-TMQ40712.1;Parent=gene-AO053_00690;Dbxref=NCBI_GP:TMQ40712.1;Name=TMQ40712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692614.1;locus_tag=AO053_00690;product=hypothetical protein;protein_id=TMQ40712.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	7449	8399	.	+	.	ID=gene-AO053_00695;Name=AO053_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00695
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	7449	8399	.	+	0	ID=cds-TMQ40713.1;Parent=gene-AO053_00695;Dbxref=NCBI_GP:TMQ40713.1;Name=TMQ40713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525615.1;locus_tag=AO053_00695;product=recombinase;protein_id=TMQ40713.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	8374	9024	.	+	.	ID=gene-AO053_00700;Name=AO053_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00700
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	8374	9024	.	+	0	ID=cds-TMQ40714.1;Parent=gene-AO053_00700;Dbxref=NCBI_GP:TMQ40714.1;Name=TMQ40714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525616.1;locus_tag=AO053_00700;product=translocation protein TolB precursor;protein_id=TMQ40714.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	9024	9458	.	+	.	ID=gene-AO053_00705;Name=AO053_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00705
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	9024	9458	.	+	0	ID=cds-TMQ40715.1;Parent=gene-AO053_00705;Dbxref=NCBI_GP:TMQ40715.1;Name=TMQ40715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668705.1;locus_tag=AO053_00705;product=single-stranded DNA-binding protein;protein_id=TMQ40715.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	9520	10569	.	+	.	ID=gene-AO053_00710;Name=AO053_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00710
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	9520	10569	.	+	0	ID=cds-TMQ40716.1;Parent=gene-AO053_00710;Dbxref=NCBI_GP:TMQ40716.1;Name=TMQ40716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525618.1;locus_tag=AO053_00710;product=hypothetical protein;protein_id=TMQ40716.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	10848	11417	.	+	.	ID=gene-AO053_00715;Name=AO053_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00715
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	10848	11417	.	+	0	ID=cds-TMQ40717.1;Parent=gene-AO053_00715;Dbxref=NCBI_GP:TMQ40717.1;Name=TMQ40717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525619.1;locus_tag=AO053_00715;product=hypothetical protein;protein_id=TMQ40717.1;transl_table=11
GCA_005888185.1|LNKP01000009.1	Genbank	gene	11414	11650	.	+	.	ID=gene-AO053_00720;Name=AO053_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00720
GCA_005888185.1|LNKP01000009.1	Protein Homology	CDS	11414	11650	.	+	0	ID=cds-TMQ40718.1;Parent=gene-AO053_00720;Dbxref=NCBI_GP:TMQ40718.1;Name=TMQ40718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652247.1;locus_tag=AO053_00720;product=hypothetical protein;protein_id=TMQ40718.1;transl_table=11
##sequence-region LNKP01000010.1 1 16122
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000010.1	Genbank	region	1	16122	.	+	.	ID=LNKP01000010.1:1..16122;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000010.1	Genbank	pseudogene	1	227	.	+	.	ID=gene-AO053_00725;Name=AO053_00725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00725;pseudo=true
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	1	227	.	+	2	ID=cds-AO053_00725;Parent=gene-AO053_00725;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525621.1;locus_tag=AO053_00725;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	235	1509	.	+	.	ID=gene-AO053_00730;Name=AO053_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00730
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	235	1509	.	+	0	ID=cds-TMQ40677.1;Parent=gene-AO053_00730;Dbxref=NCBI_GP:TMQ40677.1;Name=TMQ40677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054998.1;locus_tag=AO053_00730;product=cytosine methyltransferase;protein_id=TMQ40677.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	1557	1973	.	+	.	ID=gene-AO053_00735;Name=AO053_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00735
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	1557	1973	.	+	0	ID=cds-TMQ40678.1;Parent=gene-AO053_00735;Dbxref=NCBI_GP:TMQ40678.1;Name=TMQ40678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651292.1;locus_tag=AO053_00735;product=hypothetical protein;protein_id=TMQ40678.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	2090	2578	.	+	.	ID=gene-AO053_00740;Name=AO053_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00740
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	2090	2578	.	+	0	ID=cds-TMQ40689.1;Parent=gene-AO053_00740;Dbxref=NCBI_GP:TMQ40689.1;Name=TMQ40689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525622.1;locus_tag=AO053_00740;product=hypothetical protein;protein_id=TMQ40689.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Protein Homology	pseudogene	2568	2850	.	+	.	ID=gene-AO053_00745;Name=AO053_00745;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_00745;pseudo=true
GCA_005888185.1|LNKP01000010.1	Genbank	gene	2843	3112	.	+	.	ID=gene-AO053_00750;Name=AO053_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00750
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	2843	3112	.	+	0	ID=cds-TMQ40679.1;Parent=gene-AO053_00750;Dbxref=NCBI_GP:TMQ40679.1;Name=TMQ40679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668271.1;locus_tag=AO053_00750;product=hypothetical protein;protein_id=TMQ40679.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	3116	3553	.	+	.	ID=gene-AO053_00755;Name=AO053_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00755
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	3116	3553	.	+	0	ID=cds-TMQ40680.1;Parent=gene-AO053_00755;Dbxref=NCBI_GP:TMQ40680.1;Name=TMQ40680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525623.1;locus_tag=AO053_00755;product=hypothetical protein;protein_id=TMQ40680.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	3683	3997	.	+	.	ID=gene-AO053_00760;Name=AO053_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00760
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	3683	3997	.	+	0	ID=cds-TMQ40690.1;Parent=gene-AO053_00760;Dbxref=NCBI_GP:TMQ40690.1;Name=TMQ40690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651299.1;locus_tag=AO053_00760;product=hypothetical protein;protein_id=TMQ40690.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	3895	4920	.	+	.	ID=gene-AO053_00765;Name=AO053_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00765
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	3895	4920	.	+	0	ID=cds-TMQ40681.1;Parent=gene-AO053_00765;Dbxref=NCBI_GP:TMQ40681.1;Name=TMQ40681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641600.1;locus_tag=AO053_00765;product=integrase;protein_id=TMQ40681.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	5025	5100	.	-	.	ID=gene-AO053_00770;Name=AO053_00770;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00770
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	5025	5100	.	-	.	ID=rna-AO053_00770;Parent=gene-AO053_00770;anticodon=(pos:complement(5065..5067));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00770;product=tRNA-Lys
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	5025	5100	.	-	.	ID=exon-AO053_00770-1;Parent=rna-AO053_00770;anticodon=(pos:complement(5065..5067));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00770;product=tRNA-Lys
GCA_005888185.1|LNKP01000010.1	Genbank	gene	5124	5199	.	-	.	ID=gene-AO053_00775;Name=AO053_00775;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00775
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	5124	5199	.	-	.	ID=rna-AO053_00775;Parent=gene-AO053_00775;anticodon=(pos:complement(5164..5166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00775;product=tRNA-Lys
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	5124	5199	.	-	.	ID=exon-AO053_00775-1;Parent=rna-AO053_00775;anticodon=(pos:complement(5164..5166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00775;product=tRNA-Lys
GCA_005888185.1|LNKP01000010.1	Genbank	gene	5251	5337	.	-	.	ID=gene-AO053_00780;Name=AO053_00780;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00780
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	5251	5337	.	-	.	ID=rna-AO053_00780;Parent=gene-AO053_00780;anticodon=(pos:complement(5301..5303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00780;product=tRNA-Leu
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	5251	5337	.	-	.	ID=exon-AO053_00780-1;Parent=rna-AO053_00780;anticodon=(pos:complement(5301..5303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00780;product=tRNA-Leu
GCA_005888185.1|LNKP01000010.1	Genbank	gene	5342	5417	.	-	.	ID=gene-AO053_00785;Name=AO053_00785;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00785
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	5342	5417	.	-	.	ID=rna-AO053_00785;Parent=gene-AO053_00785;anticodon=(pos:complement(5382..5384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00785;product=tRNA-Gly
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	5342	5417	.	-	.	ID=exon-AO053_00785-1;Parent=rna-AO053_00785;anticodon=(pos:complement(5382..5384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00785;product=tRNA-Gly
GCA_005888185.1|LNKP01000010.1	Genbank	gene	5574	6131	.	-	.	ID=gene-AO053_00790;Name=AO053_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00790
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	5574	6131	.	-	0	ID=cds-TMQ40682.1;Parent=gene-AO053_00790;Dbxref=NCBI_GP:TMQ40682.1;Name=TMQ40682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658075.1;locus_tag=AO053_00790;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=TMQ40682.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	6406	7596	.	+	.	ID=gene-AO053_00795;Name=AO053_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00795
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	6406	7596	.	+	0	ID=cds-TMQ40683.1;Parent=gene-AO053_00795;Dbxref=NCBI_GP:TMQ40683.1;Name=TMQ40683.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658073.1;locus_tag=AO053_00795;product=cystathionine beta-lyase;protein_id=TMQ40683.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	7981	9342	.	+	.	ID=gene-AO053_00800;Name=AO053_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00800
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	7981	9342	.	+	0	ID=cds-TMQ40684.1;Parent=gene-AO053_00800;Dbxref=NCBI_GP:TMQ40684.1;Name=TMQ40684.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649622.1;locus_tag=AO053_00800;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=TMQ40684.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	9455	9961	.	+	.	ID=gene-AO053_00805;Name=AO053_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00805
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	9455	9961	.	+	0	ID=cds-TMQ40685.1;Parent=gene-AO053_00805;Dbxref=NCBI_GP:TMQ40685.1;Name=TMQ40685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645122.1;locus_tag=AO053_00805;product=hypothetical protein;protein_id=TMQ40685.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	10011	11018	.	-	.	ID=gene-AO053_00810;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=AO053_00810
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	10011	11018	.	-	0	ID=cds-TMQ40686.1;Parent=gene-AO053_00810;Dbxref=NCBI_GP:TMQ40686.1;Name=TMQ40686.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527541.1;locus_tag=AO053_00810;product=zinc ABC transporter substrate-binding protein;protein_id=TMQ40686.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	11196	11966	.	-	.	ID=gene-AO053_00815;Name=AO053_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00815
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	11196	11966	.	-	0	ID=cds-TMQ40691.1;Parent=gene-AO053_00815;Dbxref=NCBI_GP:TMQ40691.1;Name=TMQ40691.1;Note=accepts sulfur from CsdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649626.1;locus_tag=AO053_00815;product=sulfur acceptor protein CsdL;protein_id=TMQ40691.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	11966	13075	.	-	.	ID=gene-AO053_00820;Name=AO053_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00820
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	11966	13075	.	-	0	ID=cds-TMQ40687.1;Parent=gene-AO053_00820;Dbxref=NCBI_GP:TMQ40687.1;Name=TMQ40687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687940.1;locus_tag=AO053_00820;product=murein transglycosylase;protein_id=TMQ40687.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	13262	13338	.	+	.	ID=gene-AO053_00825;Name=AO053_00825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00825
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	13262	13338	.	+	.	ID=rna-AO053_00825;Parent=gene-AO053_00825;anticodon=(pos:13296..13298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00825;product=tRNA-Met
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	13262	13338	.	+	.	ID=exon-AO053_00825-1;Parent=rna-AO053_00825;anticodon=(pos:13296..13298);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00825;product=tRNA-Met
GCA_005888185.1|LNKP01000010.1	Genbank	gene	13469	15604	.	+	.	ID=gene-AO053_00830;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=AO053_00830
GCA_005888185.1|LNKP01000010.1	Protein Homology	CDS	13469	15604	.	+	0	ID=cds-TMQ40688.1;Parent=gene-AO053_00830;Dbxref=NCBI_GP:TMQ40688.1;Name=TMQ40688.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFS2.1;locus_tag=AO053_00830;product=23S rRNA methyltransferase;protein_id=TMQ40688.1;transl_table=11
GCA_005888185.1|LNKP01000010.1	Genbank	gene	15753	15829	.	+	.	ID=gene-AO053_00835;Name=AO053_00835;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00835
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	15753	15829	.	+	.	ID=rna-AO053_00835;Parent=gene-AO053_00835;anticodon=(pos:15787..15789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00835;product=tRNA-Arg
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	15753	15829	.	+	.	ID=exon-AO053_00835-1;Parent=rna-AO053_00835;anticodon=(pos:15787..15789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00835;product=tRNA-Arg
GCA_005888185.1|LNKP01000010.1	Genbank	gene	15856	15931	.	+	.	ID=gene-AO053_00840;Name=AO053_00840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00840
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	15856	15931	.	+	.	ID=rna-AO053_00840;Parent=gene-AO053_00840;anticodon=(pos:15889..15891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00840;product=tRNA-His
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	15856	15931	.	+	.	ID=exon-AO053_00840-1;Parent=rna-AO053_00840;anticodon=(pos:15889..15891);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00840;product=tRNA-His
GCA_005888185.1|LNKP01000010.1	Genbank	gene	15953	16029	.	+	.	ID=gene-AO053_00845;Name=AO053_00845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_00845
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	tRNA	15953	16029	.	+	.	ID=rna-AO053_00845;Parent=gene-AO053_00845;anticodon=(pos:15987..15989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00845;product=tRNA-Pro
GCA_005888185.1|LNKP01000010.1	tRNAscan-SE	exon	15953	16029	.	+	.	ID=exon-AO053_00845-1;Parent=rna-AO053_00845;anticodon=(pos:15987..15989);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_00845;product=tRNA-Pro
##sequence-region LNKP01000011.1 1 54119
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000011.1	Genbank	region	1	54119	.	+	.	ID=LNKP01000011.1:1..54119;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000011.1	Genbank	gene	414	692	.	+	.	ID=gene-AO053_00850;Name=AO053_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00850
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	414	692	.	+	0	ID=cds-TMQ40562.1;Parent=gene-AO053_00850;Dbxref=NCBI_GP:TMQ40562.1;Name=TMQ40562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995387.1;locus_tag=AO053_00850;product=hypothetical protein;protein_id=TMQ40562.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	806	1366	.	+	.	ID=gene-AO053_00855;Name=AO053_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00855
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	806	1366	.	+	0	ID=cds-TMQ40563.1;Parent=gene-AO053_00855;Dbxref=NCBI_GP:TMQ40563.1;Name=TMQ40563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551091.1;locus_tag=AO053_00855;product=aminotransferase;protein_id=TMQ40563.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	1370	1810	.	+	.	ID=gene-AO053_00860;Name=AO053_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00860
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	1370	1810	.	+	0	ID=cds-TMQ40564.1;Parent=gene-AO053_00860;Dbxref=NCBI_GP:TMQ40564.1;Name=TMQ40564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526308.1;locus_tag=AO053_00860;product=hypothetical protein;protein_id=TMQ40564.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	1872	2498	.	-	.	ID=gene-AO053_00865;Name=AO053_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00865
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	1872	2498	.	-	0	ID=cds-TMQ40565.1;Parent=gene-AO053_00865;Dbxref=NCBI_GP:TMQ40565.1;Name=TMQ40565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629869.1;locus_tag=AO053_00865;product=two-component system response regulator;protein_id=TMQ40565.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	2704	3951	.	-	.	ID=gene-AO053_00870;Name=AO053_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00870
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	2704	3951	.	-	0	ID=cds-TMQ40566.1;Parent=gene-AO053_00870;Dbxref=NCBI_GP:TMQ40566.1;Name=TMQ40566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526307.1;locus_tag=AO053_00870;product=diaminopimelate decarboxylase;protein_id=TMQ40566.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	4212	4517	.	+	.	ID=gene-AO053_00875;Name=AO053_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00875
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	4212	4517	.	+	0	ID=cds-TMQ40567.1;Parent=gene-AO053_00875;Dbxref=NCBI_GP:TMQ40567.1;Name=TMQ40567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626020.1;locus_tag=AO053_00875;product=iron donor protein CyaY;protein_id=TMQ40567.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	4519	6378	.	+	.	ID=gene-AO053_00880;Name=AO053_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00880
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	4519	6378	.	+	0	ID=cds-TMQ40568.1;Parent=gene-AO053_00880;Dbxref=NCBI_GP:TMQ40568.1;Name=TMQ40568.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995390.1;locus_tag=AO053_00880;product=ATP-dependent DNA helicase RecQ;protein_id=TMQ40568.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	6463	8181	.	+	.	ID=gene-AO053_00885;Name=AO053_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00885
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	6463	8181	.	+	0	ID=cds-TMQ40569.1;Parent=gene-AO053_00885;Dbxref=NCBI_GP:TMQ40569.1;Name=TMQ40569.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648541.1;locus_tag=AO053_00885;product=proline--tRNA ligase;protein_id=TMQ40569.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	8269	10617	.	-	.	ID=gene-AO053_00890;Name=AO053_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00890
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	8269	10617	.	-	0	ID=cds-TMQ40570.1;Parent=gene-AO053_00890;Dbxref=NCBI_GP:TMQ40570.1;Name=TMQ40570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693136.1;locus_tag=AO053_00890;product=LPS biosynthesis protein;protein_id=TMQ40570.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	10736	12145	.	-	.	ID=gene-AO053_00895;Name=AO053_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00895
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	10736	12145	.	-	0	ID=cds-TMQ40571.1;Parent=gene-AO053_00895;Dbxref=NCBI_GP:TMQ40571.1;Name=TMQ40571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526305.1;locus_tag=AO053_00895;product=cell division protein FtsQ;protein_id=TMQ40571.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	12147	12869	.	-	.	ID=gene-AO053_00900;Name=AO053_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00900
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	12147	12869	.	-	0	ID=cds-TMQ40572.1;Parent=gene-AO053_00900;Dbxref=NCBI_GP:TMQ40572.1;Name=TMQ40572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551088.1;locus_tag=AO053_00900;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=TMQ40572.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	12955	13668	.	+	.	ID=gene-AO053_00905;Name=AO053_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00905
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	12955	13668	.	+	0	ID=cds-TMQ40573.1;Parent=gene-AO053_00905;Dbxref=NCBI_GP:TMQ40573.1;Name=TMQ40573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669966.1;locus_tag=AO053_00905;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=TMQ40573.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	13898	15424	.	-	.	ID=gene-AO053_00910;Name=AO053_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00910
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	13898	15424	.	-	0	ID=cds-TMQ40574.1;Parent=gene-AO053_00910;Dbxref=NCBI_GP:TMQ40574.1;Name=TMQ40574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272200.1;locus_tag=AO053_00910;product=transporter;protein_id=TMQ40574.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	15670	16338	.	+	.	ID=gene-AO053_00915;Name=AO053_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00915
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	15670	16338	.	+	0	ID=cds-TMQ40575.1;Parent=gene-AO053_00915;Dbxref=NCBI_GP:TMQ40575.1;Name=TMQ40575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526303.1;locus_tag=AO053_00915;product=hypothetical protein;protein_id=TMQ40575.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	16380	18218	.	+	.	ID=gene-AO053_00920;Name=AO053_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00920
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	16380	18218	.	+	0	ID=cds-TMQ40576.1;Parent=gene-AO053_00920;Dbxref=NCBI_GP:TMQ40576.1;Name=TMQ40576.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UHP2.1;locus_tag=AO053_00920;product=dihydroxy-acid dehydratase;protein_id=TMQ40576.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	18297	19838	.	+	.	ID=gene-AO053_00925;Name=AO053_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00925
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	18297	19838	.	+	0	ID=cds-TMQ40577.1;Parent=gene-AO053_00925;Dbxref=NCBI_GP:TMQ40577.1;Name=TMQ40577.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551086.1;locus_tag=AO053_00925;product=threonine dehydratase;protein_id=TMQ40577.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	19877	23356	.	-	.	ID=gene-AO053_00930;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AO053_00930
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	19877	23356	.	-	0	ID=cds-TMQ40578.1;Parent=gene-AO053_00930;Dbxref=NCBI_GP:TMQ40578.1;Name=TMQ40578.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701839.1;locus_tag=AO053_00930;product=DNA polymerase III subunit alpha;protein_id=TMQ40578.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	23595	25247	.	+	.	ID=gene-AO053_00935;Name=AO053_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00935
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	23595	25247	.	+	0	ID=cds-TMQ40579.1;Parent=gene-AO053_00935;Dbxref=NCBI_GP:TMQ40579.1;Name=TMQ40579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692659.1;locus_tag=AO053_00935;product=alpha-D-phosphohexomutase;protein_id=TMQ40579.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	25409	25918	.	-	.	ID=gene-AO053_00940;Name=AO053_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00940
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	25409	25918	.	-	0	ID=cds-TMQ40580.1;Parent=gene-AO053_00940;Dbxref=NCBI_GP:TMQ40580.1;Name=TMQ40580.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551082.1;locus_tag=AO053_00940;product=preprotein translocase subunit SecB;protein_id=TMQ40580.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	25932	26378	.	-	.	ID=gene-AO053_00945;Name=AO053_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00945
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	25932	26378	.	-	0	ID=cds-TMQ40581.1;Parent=gene-AO053_00945;Dbxref=NCBI_GP:TMQ40581.1;Name=TMQ40581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629414.1;locus_tag=AO053_00945;product=hypothetical protein;protein_id=TMQ40581.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	26625	27947	.	+	.	ID=gene-AO053_00950;Name=AO053_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00950
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	26625	27947	.	+	0	ID=cds-TMQ40582.1;Parent=gene-AO053_00950;Dbxref=NCBI_GP:TMQ40582.1;Name=TMQ40582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055214.1;locus_tag=AO053_00950;product=C4-dicarboxylate ABC transporter;protein_id=TMQ40582.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	28151	29485	.	+	.	ID=gene-AO053_00955;Name=AO053_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00955
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	28151	29485	.	+	0	ID=cds-TMQ40583.1;Parent=gene-AO053_00955;Dbxref=NCBI_GP:TMQ40583.1;Name=TMQ40583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44856.1;locus_tag=AO053_00955;product=NADH dehydrogenase;protein_id=TMQ40583.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	29565	31997	.	-	.	ID=gene-AO053_00960;Name=AO053_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00960
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	29565	31997	.	-	0	ID=cds-TMQ40584.1;Parent=gene-AO053_00960;Dbxref=NCBI_GP:TMQ40584.1;Name=TMQ40584.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDX7.1;locus_tag=AO053_00960;product=glycerol-3-phosphate O-acyltransferase;protein_id=TMQ40584.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	32252	32875	.	+	.	ID=gene-AO053_00965;Name=AO053_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00965
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	32252	32875	.	+	0	ID=cds-TMQ40585.1;Parent=gene-AO053_00965;Dbxref=NCBI_GP:TMQ40585.1;Name=TMQ40585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692649.1;locus_tag=AO053_00965;product=LexA family transcriptional regulator;protein_id=TMQ40585.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	33018	33842	.	+	.	ID=gene-AO053_00970;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=AO053_00970
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	33018	33842	.	+	0	ID=cds-TMQ40586.1;Parent=gene-AO053_00970;Dbxref=NCBI_GP:TMQ40586.1;Name=TMQ40586.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44859.1;locus_tag=AO053_00970;product=diaminopimelate epimerase;protein_id=TMQ40586.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	34063	34560	.	-	.	ID=gene-AO053_00975;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=AO053_00975
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	34063	34560	.	-	0	ID=cds-TMQ40587.1;Parent=gene-AO053_00975;Dbxref=NCBI_GP:TMQ40587.1;Name=TMQ40587.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666256.1;locus_tag=AO053_00975;product=peroxidase;protein_id=TMQ40587.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	35192	39085	.	+	.	ID=gene-AO053_00980;Name=AO053_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00980
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	35192	39085	.	+	0	ID=cds-TMQ40588.1;Parent=gene-AO053_00980;Dbxref=NCBI_GP:TMQ40588.1;Name=TMQ40588.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666253.1;locus_tag=AO053_00980;product=phosphoribosylformylglycinamidine synthase;protein_id=TMQ40588.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	39580	40323	.	+	.	ID=gene-AO053_00985;Name=AO053_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00985
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	39580	40323	.	+	0	ID=cds-TMQ40589.1;Parent=gene-AO053_00985;Dbxref=NCBI_GP:TMQ40589.1;Name=TMQ40589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701846.1;locus_tag=AO053_00985;product=UDP-glucose--lipooligosaccharide glucosyltransferase;protein_id=TMQ40589.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	40376	41218	.	-	.	ID=gene-AO053_00990;Name=AO053_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00990
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	40376	41218	.	-	0	ID=cds-TMQ40590.1;Parent=gene-AO053_00990;Dbxref=NCBI_GP:TMQ40590.1;Name=TMQ40590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526293.1;locus_tag=AO053_00990;product=hypothetical protein;protein_id=TMQ40590.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	41218	42429	.	-	.	ID=gene-AO053_00995;Name=AO053_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_00995
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	41218	42429	.	-	0	ID=cds-TMQ40591.1;Parent=gene-AO053_00995;Dbxref=NCBI_GP:TMQ40591.1;Name=TMQ40591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526292.1;locus_tag=AO053_00995;product=hypothetical protein;protein_id=TMQ40591.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	42605	43288	.	+	.	ID=gene-AO053_01000;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=AO053_01000
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	42605	43288	.	+	0	ID=cds-TMQ40592.1;Parent=gene-AO053_01000;Dbxref=NCBI_GP:TMQ40592.1;Name=TMQ40592.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356893.1;locus_tag=AO053_01000;product=phosphoglyceromutase;protein_id=TMQ40592.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	43366	43578	.	-	.	ID=gene-AO053_01005;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AO053_01005
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	43366	43578	.	-	0	ID=cds-TMQ40593.1;Parent=gene-AO053_01005;Dbxref=NCBI_GP:TMQ40593.1;Name=TMQ40593.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;inference=EXISTENCE: similar to AA sequence:SwissProt:P44367.1;locus_tag=AO053_01005;product=50S ribosomal protein L31;protein_id=TMQ40593.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	43755	44891	.	+	.	ID=gene-AO053_01010;Name=AO053_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01010
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	43755	44891	.	+	0	ID=cds-TMQ40594.1;Parent=gene-AO053_01010;Dbxref=NCBI_GP:TMQ40594.1;Name=TMQ40594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44320.1;locus_tag=AO053_01010;product=A/G-specific adenine glycosylase;protein_id=TMQ40594.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	44869	45141	.	+	.	ID=gene-AO053_01015;Name=AO053_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01015
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	44869	45141	.	+	0	ID=cds-TMQ40595.1;Parent=gene-AO053_01015;Dbxref=NCBI_GP:TMQ40595.1;Name=TMQ40595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44048.1;locus_tag=AO053_01015;product=iron transporter;protein_id=TMQ40595.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	45156	46229	.	+	.	ID=gene-AO053_01020;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=AO053_01020
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	45156	46229	.	+	0	ID=cds-TMQ40596.1;Parent=gene-AO053_01020;Dbxref=NCBI_GP:TMQ40596.1;Name=TMQ40596.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;inference=EXISTENCE: similar to AA sequence:SwissProt:P44049.1;locus_tag=AO053_01020;product=murein transglycosylase;protein_id=TMQ40596.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	46467	46542	.	+	.	ID=gene-AO053_01025;Name=AO053_01025;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_01025
GCA_005888185.1|LNKP01000011.1	tRNAscan-SE	tRNA	46467	46542	.	+	.	ID=rna-AO053_01025;Parent=gene-AO053_01025;anticodon=(pos:46500..46502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_01025;product=tRNA-Phe
GCA_005888185.1|LNKP01000011.1	tRNAscan-SE	exon	46467	46542	.	+	.	ID=exon-AO053_01025-1;Parent=rna-AO053_01025;anticodon=(pos:46500..46502);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_01025;product=tRNA-Phe
GCA_005888185.1|LNKP01000011.1	Genbank	gene	46545	46620	.	+	.	ID=gene-AO053_01030;Name=AO053_01030;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_01030
GCA_005888185.1|LNKP01000011.1	tRNAscan-SE	tRNA	46545	46620	.	+	.	ID=rna-AO053_01030;Parent=gene-AO053_01030;anticodon=(pos:46578..46580);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_01030;product=tRNA-Asn
GCA_005888185.1|LNKP01000011.1	tRNAscan-SE	exon	46545	46620	.	+	.	ID=exon-AO053_01030-1;Parent=rna-AO053_01030;anticodon=(pos:46578..46580);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_01030;product=tRNA-Asn
GCA_005888185.1|LNKP01000011.1	Genbank	gene	46839	47519	.	-	.	ID=gene-AO053_01035;Name=AO053_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01035
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	46839	47519	.	-	0	ID=cds-TMQ40597.1;Parent=gene-AO053_01035;Dbxref=NCBI_GP:TMQ40597.1;Name=TMQ40597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640958.1;locus_tag=AO053_01035;product=hypothetical protein;protein_id=TMQ40597.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	47516	48781	.	-	.	ID=gene-AO053_01040;Name=AO053_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01040
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	47516	48781	.	-	0	ID=cds-TMQ40598.1;Parent=gene-AO053_01040;Dbxref=NCBI_GP:TMQ40598.1;Name=TMQ40598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44308.1;locus_tag=AO053_01040;product=ribosylnicotinamide kinase;protein_id=TMQ40598.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	cmsearch	binding_site	48734	48911	.	+	.	ID=id-LNKP01000011.1:48734..48911;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=misc_binding
GCA_005888185.1|LNKP01000011.1	Genbank	gene	49000	49647	.	+	.	ID=gene-AO053_01045;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AO053_01045
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	49000	49647	.	+	0	ID=cds-TMQ40599.1;Parent=gene-AO053_01045;Dbxref=NCBI_GP:TMQ40599.1;Name=TMQ40599.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551076.1;locus_tag=AO053_01045;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=TMQ40599.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	49674	50510	.	+	.	ID=gene-AO053_01050;Name=AO053_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01050
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	49674	50510	.	+	0	ID=cds-TMQ40600.1;Parent=gene-AO053_01050;Dbxref=NCBI_GP:TMQ40600.1;Name=TMQ40600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526288.1;locus_tag=AO053_01050;product=lipooligosaccharide biosynthesis protein lpsA;protein_id=TMQ40600.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	50559	51041	.	-	.	ID=gene-AO053_01055;Name=AO053_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01055
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	50559	51041	.	-	0	ID=cds-TMQ40601.1;Parent=gene-AO053_01055;Dbxref=NCBI_GP:TMQ40601.1;Name=TMQ40601.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689062.1;locus_tag=AO053_01055;product=rRNA methylase;protein_id=TMQ40601.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	51052	51633	.	-	.	ID=gene-AO053_01060;Name=AO053_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01060
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	51052	51633	.	-	0	ID=cds-TMQ40602.1;Parent=gene-AO053_01060;Dbxref=NCBI_GP:TMQ40602.1;Name=TMQ40602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44869.1;locus_tag=AO053_01060;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=TMQ40602.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	51730	52932	.	+	.	ID=gene-AO053_01065;Name=AO053_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01065
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	51730	52932	.	+	0	ID=cds-TMQ40603.1;Parent=gene-AO053_01065;Dbxref=NCBI_GP:TMQ40603.1;Name=TMQ40603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652357.1;locus_tag=AO053_01065;product=cell division protein FtsY;protein_id=TMQ40603.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	gene	52951	53607	.	+	.	ID=gene-AO053_01070;Name=AO053_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01070
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	52951	53607	.	+	0	ID=cds-TMQ40604.1;Parent=gene-AO053_01070;Dbxref=NCBI_GP:TMQ40604.1;Name=TMQ40604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44871.1;locus_tag=AO053_01070;product=cell division ATP-binding protein FtsE;protein_id=TMQ40604.1;transl_table=11
GCA_005888185.1|LNKP01000011.1	Genbank	pseudogene	53617	54119	.	+	.	ID=gene-AO053_01075;Name=AO053_01075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_01075;pseudo=true
GCA_005888185.1|LNKP01000011.1	Protein Homology	CDS	53617	54119	.	+	0	ID=cds-AO053_01075;Parent=gene-AO053_01075;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666206.1;locus_tag=AO053_01075;pseudo=true;transl_table=11
##sequence-region LNKP01000012.1 1 108659
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000012.1	Genbank	region	1	108659	.	+	.	ID=LNKP01000012.1:1..108659;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000012.1	Genbank	pseudogene	1	430	.	+	.	ID=gene-AO053_01080;Name=AO053_01080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_01080;pseudo=true
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	1	430	.	+	1	ID=cds-AO053_01080;Parent=gene-AO053_01080;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551072.1;locus_tag=AO053_01080;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	750	1061	.	+	.	ID=gene-AO053_01085;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=AO053_01085
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	750	1061	.	+	0	ID=cds-TMQ40423.1;Parent=gene-AO053_01085;Dbxref=NCBI_GP:TMQ40423.1;Name=TMQ40423.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=AO053_01085;product=30S ribosomal protein S10;protein_id=TMQ40423.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	1078	1704	.	+	.	ID=gene-AO053_01090;Name=AO053_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01090
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	1078	1704	.	+	0	ID=cds-TMQ40424.1;Parent=gene-AO053_01090;Dbxref=NCBI_GP:TMQ40424.1;Name=TMQ40424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44344.1;locus_tag=AO053_01090;product=50S ribosomal protein L3;protein_id=TMQ40424.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	1720	2322	.	+	.	ID=gene-AO053_01095;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AO053_01095
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	1720	2322	.	+	0	ID=cds-TMQ40425.1;Parent=gene-AO053_01095;Dbxref=NCBI_GP:TMQ40425.1;Name=TMQ40425.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356227.1;locus_tag=AO053_01095;product=50S ribosomal protein L4;protein_id=TMQ40425.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	2319	2618	.	+	.	ID=gene-AO053_01100;Name=AO053_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01100
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	2319	2618	.	+	0	ID=cds-TMQ40426.1;Parent=gene-AO053_01100;Dbxref=NCBI_GP:TMQ40426.1;Name=TMQ40426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356228.1;locus_tag=AO053_01100;product=50S ribosomal protein L23;protein_id=TMQ40426.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	2636	3457	.	+	.	ID=gene-AO053_01105;Name=AO053_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01105
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	2636	3457	.	+	0	ID=cds-TMQ40427.1;Parent=gene-AO053_01105;Dbxref=NCBI_GP:TMQ40427.1;Name=TMQ40427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805226.1;locus_tag=AO053_01105;product=50S ribosomal protein L2;protein_id=TMQ40427.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	3483	3758	.	+	.	ID=gene-AO053_01110;Name=AO053_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01110
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	3483	3758	.	+	0	ID=cds-TMQ40428.1;Parent=gene-AO053_01110;Dbxref=NCBI_GP:TMQ40428.1;Name=TMQ40428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745959.1;locus_tag=AO053_01110;product=30S ribosomal protein S19;protein_id=TMQ40428.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	3770	4102	.	+	.	ID=gene-AO053_01115;Name=AO053_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01115
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	3770	4102	.	+	0	ID=cds-TMQ40429.1;Parent=gene-AO053_01115;Dbxref=NCBI_GP:TMQ40429.1;Name=TMQ40429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=AO053_01115;product=50S ribosomal protein L22;protein_id=TMQ40429.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	4120	4827	.	+	.	ID=gene-AO053_01120;Name=AO053_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01120
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	4120	4827	.	+	0	ID=cds-TMQ40430.1;Parent=gene-AO053_01120;Dbxref=NCBI_GP:TMQ40430.1;Name=TMQ40430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526115.1;locus_tag=AO053_01120;product=30S ribosomal protein S3;protein_id=TMQ40430.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	4841	5251	.	+	.	ID=gene-AO053_01125;Name=AO053_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01125
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	4841	5251	.	+	0	ID=cds-TMQ40431.1;Parent=gene-AO053_01125;Dbxref=NCBI_GP:TMQ40431.1;Name=TMQ40431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=AO053_01125;product=50S ribosomal protein L16;protein_id=TMQ40431.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	5251	5442	.	+	.	ID=gene-AO053_01130;Name=AO053_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01130
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	5251	5442	.	+	0	ID=cds-TMQ40432.1;Parent=gene-AO053_01130;Dbxref=NCBI_GP:TMQ40432.1;Name=TMQ40432.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695090.1;locus_tag=AO053_01130;product=50S ribosomal protein L29;protein_id=TMQ40432.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	5442	5699	.	+	.	ID=gene-AO053_01135;Name=AO053_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01135
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	5442	5699	.	+	0	ID=cds-TMQ40433.1;Parent=gene-AO053_01135;Dbxref=NCBI_GP:TMQ40433.1;Name=TMQ40433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005764317.1;locus_tag=AO053_01135;product=30S ribosomal protein S17;protein_id=TMQ40433.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	6089	6712	.	+	.	ID=gene-AO053_01140;Name=AO053_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01140
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	6089	6712	.	+	0	ID=cds-TMQ40535.1;Parent=gene-AO053_01140;Dbxref=NCBI_GP:TMQ40535.1;Name=TMQ40535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005685976.1;locus_tag=AO053_01140;product=hypothetical protein;protein_id=TMQ40535.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	6994	7365	.	+	.	ID=gene-AO053_01145;Name=AO053_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01145
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	6994	7365	.	+	0	ID=cds-TMQ40434.1;Parent=gene-AO053_01145;Dbxref=NCBI_GP:TMQ40434.1;Name=TMQ40434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005590135.1;locus_tag=AO053_01145;product=50S ribosomal protein L14;protein_id=TMQ40434.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	7376	7687	.	+	.	ID=gene-AO053_01150;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AO053_01150
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	7376	7687	.	+	0	ID=cds-TMQ40435.1;Parent=gene-AO053_01150;Dbxref=NCBI_GP:TMQ40435.1;Name=TMQ40435.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:SwissProt:P44362.1;locus_tag=AO053_01150;product=50S ribosomal protein L24;protein_id=TMQ40435.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	7705	8244	.	+	.	ID=gene-AO053_01155;Name=AO053_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01155
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	7705	8244	.	+	0	ID=cds-TMQ40436.1;Parent=gene-AO053_01155;Dbxref=NCBI_GP:TMQ40436.1;Name=TMQ40436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44346.2;locus_tag=AO053_01155;product=50S ribosomal protein L5;protein_id=TMQ40436.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	8256	8561	.	+	.	ID=gene-AO053_01160;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AO053_01160
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	8256	8561	.	+	0	ID=cds-TMQ40437.1;Parent=gene-AO053_01160;Dbxref=NCBI_GP:TMQ40437.1;Name=TMQ40437.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167559.1;locus_tag=AO053_01160;product=30S ribosomal protein S14;protein_id=TMQ40437.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	8598	8990	.	+	.	ID=gene-AO053_01165;Name=AO053_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01165
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	8598	8990	.	+	0	ID=cds-TMQ40438.1;Parent=gene-AO053_01165;Dbxref=NCBI_GP:TMQ40438.1;Name=TMQ40438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65QW9.1;locus_tag=AO053_01165;product=30S ribosomal protein S8;protein_id=TMQ40438.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	9006	9539	.	+	.	ID=gene-AO053_01170;Name=AO053_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01170
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	9006	9539	.	+	0	ID=cds-TMQ40439.1;Parent=gene-AO053_01170;Dbxref=NCBI_GP:TMQ40439.1;Name=TMQ40439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500767.1;locus_tag=AO053_01170;product=50S ribosomal protein L6;protein_id=TMQ40439.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	9553	9906	.	+	.	ID=gene-AO053_01175;Name=AO053_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01175
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	9553	9906	.	+	0	ID=cds-TMQ40440.1;Parent=gene-AO053_01175;Dbxref=NCBI_GP:TMQ40440.1;Name=TMQ40440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7VKE9.1;locus_tag=AO053_01175;product=50S ribosomal protein L18;protein_id=TMQ40440.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	9921	10421	.	+	.	ID=gene-AO053_01180;Name=AO053_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01180
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	9921	10421	.	+	0	ID=cds-TMQ40441.1;Parent=gene-AO053_01180;Dbxref=NCBI_GP:TMQ40441.1;Name=TMQ40441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356922.1;locus_tag=AO053_01180;product=30S ribosomal protein S5;protein_id=TMQ40441.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	10428	10607	.	+	.	ID=gene-AO053_01185;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AO053_01185
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	10428	10607	.	+	0	ID=cds-TMQ40442.1;Parent=gene-AO053_01185;Dbxref=NCBI_GP:TMQ40442.1;Name=TMQ40442.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201188.1;locus_tag=AO053_01185;product=50S ribosomal protein L30;protein_id=TMQ40442.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	10611	11045	.	+	.	ID=gene-AO053_01190;Name=AO053_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01190
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	10611	11045	.	+	0	ID=cds-TMQ40443.1;Parent=gene-AO053_01190;Dbxref=NCBI_GP:TMQ40443.1;Name=TMQ40443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMA2.1;locus_tag=AO053_01190;product=50S ribosomal protein L15;protein_id=TMQ40443.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	11053	12378	.	+	.	ID=gene-AO053_01195;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AO053_01195
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	11053	12378	.	+	0	ID=cds-TMQ40444.1;Parent=gene-AO053_01195;Dbxref=NCBI_GP:TMQ40444.1;Name=TMQ40444.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356919.1;locus_tag=AO053_01195;product=preprotein translocase subunit SecY;protein_id=TMQ40444.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	12407	12520	.	+	.	ID=gene-AO053_01200;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AO053_01200
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	12407	12520	.	+	0	ID=cds-TMQ40445.1;Parent=gene-AO053_01200;Dbxref=NCBI_GP:TMQ40445.1;Name=TMQ40445.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250018.1;locus_tag=AO053_01200;product=50S ribosomal protein L36;protein_id=TMQ40445.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	12660	13016	.	+	.	ID=gene-AO053_01205;Name=AO053_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01205
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	12660	13016	.	+	0	ID=cds-TMQ40446.1;Parent=gene-AO053_01205;Dbxref=NCBI_GP:TMQ40446.1;Name=TMQ40446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=AO053_01205;product=30S ribosomal protein S13;protein_id=TMQ40446.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	13032	13421	.	+	.	ID=gene-AO053_01210;Name=AO053_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01210
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	13032	13421	.	+	0	ID=cds-TMQ40447.1;Parent=gene-AO053_01210;Dbxref=NCBI_GP:TMQ40447.1;Name=TMQ40447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44379.2;locus_tag=AO053_01210;product=30S ribosomal protein S11;protein_id=TMQ40447.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	13449	14069	.	+	.	ID=gene-AO053_01215;Name=AO053_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01215
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	13449	14069	.	+	0	ID=cds-TMQ40448.1;Parent=gene-AO053_01215;Dbxref=NCBI_GP:TMQ40448.1;Name=TMQ40448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759597.1;locus_tag=AO053_01215;product=30S ribosomal protein S4;protein_id=TMQ40448.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	14101	15087	.	+	.	ID=gene-AO053_01220;Name=AO053_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01220
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	14101	15087	.	+	0	ID=cds-TMQ40449.1;Parent=gene-AO053_01220;Dbxref=NCBI_GP:TMQ40449.1;Name=TMQ40449.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM97.1;locus_tag=AO053_01220;product=DNA-directed RNA polymerase subunit alpha;protein_id=TMQ40449.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	15128	15514	.	+	.	ID=gene-AO053_01225;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AO053_01225
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	15128	15514	.	+	0	ID=cds-TMQ40450.1;Parent=gene-AO053_01225;Dbxref=NCBI_GP:TMQ40450.1;Name=TMQ40450.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;inference=EXISTENCE: similar to AA sequence:SwissProt:P44355.1;locus_tag=AO053_01225;product=50S ribosomal protein L17;protein_id=TMQ40450.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	15641	16237	.	-	.	ID=gene-AO053_01230;Name=AO053_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01230
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	15641	16237	.	-	0	ID=cds-TMQ40451.1;Parent=gene-AO053_01230;Dbxref=NCBI_GP:TMQ40451.1;Name=TMQ40451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670086.1;locus_tag=AO053_01230;product=cAMP-binding protein;protein_id=TMQ40451.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Protein Homology	pseudogene	16356	17056	.	-	.	ID=gene-AO053_01235;Name=AO053_01235;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_01235;pseudo=true
GCA_005888185.1|LNKP01000012.1	Genbank	gene	17190	17999	.	+	.	ID=gene-AO053_01240;Name=AO053_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01240
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	17190	17999	.	+	0	ID=cds-TMQ40452.1;Parent=gene-AO053_01240;Dbxref=NCBI_GP:TMQ40452.1;Name=TMQ40452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995481.1;locus_tag=AO053_01240;product=hypothetical protein;protein_id=TMQ40452.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	18031	19224	.	-	.	ID=gene-AO053_01245;Name=AO053_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01245
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	18031	19224	.	-	0	ID=cds-TMQ40453.1;Parent=gene-AO053_01245;Dbxref=NCBI_GP:TMQ40453.1;Name=TMQ40453.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701863.1;locus_tag=AO053_01245;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=TMQ40453.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	19335	19892	.	-	.	ID=gene-AO053_01250;Name=AO053_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01250
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	19335	19892	.	-	0	ID=cds-TMQ40454.1;Parent=gene-AO053_01250;Dbxref=NCBI_GP:TMQ40454.1;Name=TMQ40454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686003.1;locus_tag=AO053_01250;product=ribosome-recycling factor;protein_id=TMQ40454.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	20044	21660	.	-	.	ID=gene-AO053_01255;Name=AO053_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01255
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	20044	21660	.	-	0	ID=cds-TMQ40455.1;Parent=gene-AO053_01255;Dbxref=NCBI_GP:TMQ40455.1;Name=TMQ40455.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356904.1;locus_tag=AO053_01255;product=phosphoenolpyruvate carboxykinase;protein_id=TMQ40455.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	21833	22714	.	-	.	ID=gene-AO053_01260;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=AO053_01260
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	21833	22714	.	-	0	ID=cds-TMQ40456.1;Parent=gene-AO053_01260;Dbxref=NCBI_GP:TMQ40456.1;Name=TMQ40456.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663096.1;locus_tag=AO053_01260;product=Hsp33-like chaperonin;protein_id=TMQ40456.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	22858	24231	.	-	.	ID=gene-AO053_01265;Name=AO053_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01265
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	22858	24231	.	-	0	ID=cds-TMQ40457.1;Parent=gene-AO053_01265;Dbxref=NCBI_GP:TMQ40457.1;Name=TMQ40457.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652406.1;locus_tag=AO053_01265;product=argininosuccinate lyase;protein_id=TMQ40457.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	24366	25253	.	-	.	ID=gene-AO053_01270;Name=AO053_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01270
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	24366	25253	.	-	0	ID=cds-TMQ40458.1;Parent=gene-AO053_01270;Dbxref=NCBI_GP:TMQ40458.1;Name=TMQ40458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701865.1;locus_tag=AO053_01270;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=TMQ40458.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	25275	25466	.	-	.	ID=gene-AO053_01275;Name=AO053_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01275
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	25275	25466	.	-	0	ID=cds-TMQ40459.1;Parent=gene-AO053_01275;Dbxref=NCBI_GP:TMQ40459.1;Name=TMQ40459.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDR1.1;locus_tag=AO053_01275;product=carbon storage regulator;protein_id=TMQ40459.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	25544	28168	.	-	.	ID=gene-AO053_01280;Name=AO053_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01280
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	25544	28168	.	-	0	ID=cds-TMQ40460.1;Parent=gene-AO053_01280;Dbxref=NCBI_GP:TMQ40460.1;Name=TMQ40460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652410.1;locus_tag=AO053_01280;product=alanine--tRNA ligase;protein_id=TMQ40460.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	28355	28780	.	-	.	ID=gene-AO053_01285;Name=AO053_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01285
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	28355	28780	.	-	0	ID=cds-TMQ40461.1;Parent=gene-AO053_01285;Dbxref=NCBI_GP:TMQ40461.1;Name=TMQ40461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696761.1;locus_tag=AO053_01285;product=universal stress protein;protein_id=TMQ40461.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	28882	30174	.	-	.	ID=gene-AO053_01290;Name=AO053_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01290
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	28882	30174	.	-	0	ID=cds-TMQ40462.1;Parent=gene-AO053_01290;Dbxref=NCBI_GP:TMQ40462.1;Name=TMQ40462.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44881.1;locus_tag=AO053_01290;product=Xaa-Pro aminopeptidase;protein_id=TMQ40462.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	30186	30734	.	-	.	ID=gene-AO053_01295;Name=AO053_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01295
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	30186	30734	.	-	0	ID=cds-TMQ40463.1;Parent=gene-AO053_01295;Dbxref=NCBI_GP:TMQ40463.1;Name=TMQ40463.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636269.1;locus_tag=AO053_01295;product=hypothetical protein;protein_id=TMQ40463.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	30905	31927	.	-	.	ID=gene-AO053_01300;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=AO053_01300
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	30905	31927	.	-	0	ID=cds-TMQ40464.1;Parent=gene-AO053_01300;Dbxref=NCBI_GP:TMQ40464.1;Name=TMQ40464.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272228.1;locus_tag=AO053_01300;product=galactose mutarotase;protein_id=TMQ40464.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	31937	33091	.	-	.	ID=gene-AO053_01305;Name=AO053_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01305
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	31937	33091	.	-	0	ID=cds-TMQ40465.1;Parent=gene-AO053_01305;Dbxref=NCBI_GP:TMQ40465.1;Name=TMQ40465.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDQ5.1;locus_tag=AO053_01305;product=galactokinase;protein_id=TMQ40465.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	33168	34217	.	-	.	ID=gene-AO053_01310;Name=AO053_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01310
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	33168	34217	.	-	0	ID=cds-TMQ40466.1;Parent=gene-AO053_01310;Dbxref=NCBI_GP:TMQ40466.1;Name=TMQ40466.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690427.1;locus_tag=AO053_01310;product=galactose-1-phosphate uridylyltransferase;protein_id=TMQ40466.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	34425	35423	.	+	.	ID=gene-AO053_01315;Name=AO053_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01315
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	34425	35423	.	+	0	ID=cds-TMQ40467.1;Parent=gene-AO053_01315;Dbxref=NCBI_GP:TMQ40467.1;Name=TMQ40467.1;Note=controls transcription of galETKM;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690429.1;locus_tag=AO053_01315;product=transcriptional regulator;protein_id=TMQ40467.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	35568	36563	.	+	.	ID=gene-AO053_01320;Name=AO053_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01320
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	35568	36563	.	+	0	ID=cds-TMQ40468.1;Parent=gene-AO053_01320;Dbxref=NCBI_GP:TMQ40468.1;Name=TMQ40468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701875.1;locus_tag=AO053_01320;product=sugar ABC transporter substrate-binding protein;protein_id=TMQ40468.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	36629	38149	.	+	.	ID=gene-AO053_01325;Name=AO053_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01325
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	36629	38149	.	+	0	ID=cds-TMQ40469.1;Parent=gene-AO053_01325;Dbxref=NCBI_GP:TMQ40469.1;Name=TMQ40469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689088.1;locus_tag=AO053_01325;product=sugar ABC transporter ATP-binding protein;protein_id=TMQ40469.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	38166	39176	.	+	.	ID=gene-AO053_01330;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=AO053_01330
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	38166	39176	.	+	0	ID=cds-TMQ40470.1;Parent=gene-AO053_01330;Dbxref=NCBI_GP:TMQ40470.1;Name=TMQ40470.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648354.1;locus_tag=AO053_01330;product=beta-methylgalactoside transporter permease;protein_id=TMQ40470.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	39322	40056	.	+	.	ID=gene-AO053_01335;Name=AO053_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01335
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	39322	40056	.	+	0	ID=cds-TMQ40471.1;Parent=gene-AO053_01335;Dbxref=NCBI_GP:TMQ40471.1;Name=TMQ40471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551056.1;locus_tag=AO053_01335;product=hypothetical protein;protein_id=TMQ40471.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	40062	40619	.	+	.	ID=gene-AO053_01340;Name=AO053_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01340
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	40062	40619	.	+	0	ID=cds-TMQ40472.1;Parent=gene-AO053_01340;Dbxref=NCBI_GP:TMQ40472.1;Name=TMQ40472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690438.1;locus_tag=AO053_01340;product=septation protein A;protein_id=TMQ40472.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	40619	41095	.	+	.	ID=gene-AO053_01345;Name=AO053_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01345
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	40619	41095	.	+	0	ID=cds-TMQ40473.1;Parent=gene-AO053_01345;Dbxref=NCBI_GP:TMQ40473.1;Name=TMQ40473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526267.1;locus_tag=AO053_01345;product=acyl-CoA thioesterase;protein_id=TMQ40473.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	41112	41408	.	+	.	ID=gene-AO053_01350;Name=AO053_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01350
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	41112	41408	.	+	0	ID=cds-TMQ40474.1;Parent=gene-AO053_01350;Dbxref=NCBI_GP:TMQ40474.1;Name=TMQ40474.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636808.1;locus_tag=AO053_01350;product=hypothetical protein;protein_id=TMQ40474.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	41424	43205	.	+	.	ID=gene-AO053_01355;Name=AO053_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01355
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	41424	43205	.	+	0	ID=cds-TMQ40475.1;Parent=gene-AO053_01355;Dbxref=NCBI_GP:TMQ40475.1;Name=TMQ40475.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44888.1;locus_tag=AO053_01355;product=lytic murein transglycosylase;protein_id=TMQ40475.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	43243	43548	.	+	.	ID=gene-AO053_01360;Name=AO053_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01360
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	43243	43548	.	+	0	ID=cds-TMQ40476.1;Parent=gene-AO053_01360;Dbxref=NCBI_GP:TMQ40476.1;Name=TMQ40476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663067.1;locus_tag=AO053_01360;product=transcriptional regulator;protein_id=TMQ40476.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	43535	44275	.	+	.	ID=gene-AO053_01365;Name=AO053_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01365
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	43535	44275	.	+	0	ID=cds-TMQ40477.1;Parent=gene-AO053_01365;Dbxref=NCBI_GP:TMQ40477.1;Name=TMQ40477.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551053.1;locus_tag=AO053_01365;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=TMQ40477.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	44381	44725	.	-	.	ID=gene-AO053_01370;Name=AO053_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01370
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	44381	44725	.	-	0	ID=cds-TMQ40478.1;Parent=gene-AO053_01370;Dbxref=NCBI_GP:TMQ40478.1;Name=TMQ40478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44891.1;locus_tag=AO053_01370;product=fumarate reductase;protein_id=TMQ40478.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	44738	45148	.	-	.	ID=gene-AO053_01375;Name=AO053_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01375
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	44738	45148	.	-	0	ID=cds-TMQ40479.1;Parent=gene-AO053_01375;Dbxref=NCBI_GP:TMQ40479.1;Name=TMQ40479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701880.1;locus_tag=AO053_01375;product=fumarate reductase;protein_id=TMQ40479.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	45159	45929	.	-	.	ID=gene-AO053_01380;Name=AO053_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01380
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	45159	45929	.	-	0	ID=cds-TMQ40480.1;Parent=gene-AO053_01380;Dbxref=NCBI_GP:TMQ40480.1;Name=TMQ40480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44893.1;locus_tag=AO053_01380;product=fumarate reductase;protein_id=TMQ40480.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	45922	47721	.	-	.	ID=gene-AO053_01385;Name=AO053_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01385
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	45922	47721	.	-	0	ID=cds-TMQ40481.1;Parent=gene-AO053_01385;Dbxref=NCBI_GP:TMQ40481.1;Name=TMQ40481.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655655.1;locus_tag=AO053_01385;product=fumarate reductase;protein_id=TMQ40481.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	47932	48903	.	+	.	ID=gene-AO053_01390;Name=AO053_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01390
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	47932	48903	.	+	0	ID=cds-TMQ40482.1;Parent=gene-AO053_01390;Dbxref=NCBI_GP:TMQ40482.1;Name=TMQ40482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526260.1;locus_tag=AO053_01390;product=elongation factor P--(R)-beta-lysine ligase;protein_id=TMQ40482.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	49168	49851	.	-	.	ID=gene-AO053_01395;Name=AO053_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01395
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	49168	49851	.	-	0	ID=cds-TMQ40483.1;Parent=gene-AO053_01395;Dbxref=NCBI_GP:TMQ40483.1;Name=TMQ40483.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272237.1;locus_tag=AO053_01395;product=two-component system response regulator;protein_id=TMQ40483.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	49905	50318	.	-	.	ID=gene-AO053_01400;Name=AO053_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01400
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	49905	50318	.	-	0	ID=cds-TMQ40484.1;Parent=gene-AO053_01400;Dbxref=NCBI_GP:TMQ40484.1;Name=TMQ40484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648317.1;locus_tag=AO053_01400;product=cell envelope protein SmpA;protein_id=TMQ40484.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	50384	51400	.	-	.	ID=gene-AO053_01405;Name=AO053_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01405
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	50384	51400	.	-	0	ID=cds-TMQ40485.1;Parent=gene-AO053_01405;Dbxref=NCBI_GP:TMQ40485.1;Name=TMQ40485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551050.1;locus_tag=AO053_01405;product=nucleoid-associated protein NdpA;protein_id=TMQ40485.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	51526	51744	.	+	.	ID=gene-AO053_01410;Name=AO053_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01410
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	51526	51744	.	+	0	ID=cds-TMQ40486.1;Parent=gene-AO053_01410;Dbxref=NCBI_GP:TMQ40486.1;Name=TMQ40486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM60.1;locus_tag=AO053_01410;product=hypothetical protein;protein_id=TMQ40486.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	51746	53503	.	+	.	ID=gene-AO053_01415;Name=AO053_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01415
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	51746	53503	.	+	0	ID=cds-TMQ40487.1;Parent=gene-AO053_01415;Dbxref=NCBI_GP:TMQ40487.1;Name=TMQ40487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701883.1;locus_tag=AO053_01415;product=hypothetical protein;protein_id=TMQ40487.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	53701	54693	.	+	.	ID=gene-AO053_01420;Name=AO053_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01420
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	53701	54693	.	+	0	ID=cds-TMQ40488.1;Parent=gene-AO053_01420;Dbxref=NCBI_GP:TMQ40488.1;Name=TMQ40488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648312.1;locus_tag=AO053_01420;product=hypothetical protein;protein_id=TMQ40488.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	54832	55410	.	-	.	ID=gene-AO053_01425;Name=AO053_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01425
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	54832	55410	.	-	0	ID=cds-TMQ40489.1;Parent=gene-AO053_01425;Dbxref=NCBI_GP:TMQ40489.1;Name=TMQ40489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652462.1;locus_tag=AO053_01425;product=molybdenum cofactor guanylyltransferase;protein_id=TMQ40489.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	55475	55741	.	+	.	ID=gene-AO053_01430;Name=AO053_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01430
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	55475	55741	.	+	0	ID=cds-TMQ40490.1;Parent=gene-AO053_01430;Dbxref=NCBI_GP:TMQ40490.1;Name=TMQ40490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631120.1;locus_tag=AO053_01430;product=hypothetical protein;protein_id=TMQ40490.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	55754	56371	.	+	.	ID=gene-AO053_01435;Name=AO053_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01435
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	55754	56371	.	+	0	ID=cds-TMQ40491.1;Parent=gene-AO053_01435;Dbxref=NCBI_GP:TMQ40491.1;Name=TMQ40491.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652464.1;locus_tag=AO053_01435;product=thiol:disulfide interchange protein;protein_id=TMQ40491.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	56433	56768	.	+	.	ID=gene-AO053_01440;Name=AO053_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01440
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	56433	56768	.	+	0	ID=cds-TMQ40492.1;Parent=gene-AO053_01440;Dbxref=NCBI_GP:TMQ40492.1;Name=TMQ40492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701886.1;locus_tag=AO053_01440;product=hypothetical protein;protein_id=TMQ40492.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	56912	58003	.	+	.	ID=gene-AO053_01445;Name=AO053_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01445
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	56912	58003	.	+	0	ID=cds-TMQ40493.1;Parent=gene-AO053_01445;Dbxref=NCBI_GP:TMQ40493.1;Name=TMQ40493.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701887.1;locus_tag=AO053_01445;product=tRNA (uracil-5-)-methyltransferase;protein_id=TMQ40493.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	57985	58758	.	+	.	ID=gene-AO053_01450;Name=AO053_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01450
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	57985	58758	.	+	0	ID=cds-TMQ40494.1;Parent=gene-AO053_01450;Dbxref=NCBI_GP:TMQ40494.1;Name=TMQ40494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648299.1;locus_tag=AO053_01450;product=DNA polymerase I;protein_id=TMQ40494.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	58752	59186	.	+	.	ID=gene-AO053_01455;Name=AO053_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01455
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	58752	59186	.	+	0	ID=cds-TMQ40495.1;Parent=gene-AO053_01455;Dbxref=NCBI_GP:TMQ40495.1;Name=TMQ40495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701889.1;locus_tag=AO053_01455;product=hypothetical protein;protein_id=TMQ40495.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	59609	60124	.	+	.	ID=gene-AO053_01460;Name=AO053_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01460
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	59609	60124	.	+	0	ID=cds-TMQ40496.1;Parent=gene-AO053_01460;Dbxref=NCBI_GP:TMQ40496.1;Name=TMQ40496.1;Note=in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701890.1;locus_tag=AO053_01460;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=TMQ40496.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	60121	61512	.	+	.	ID=gene-AO053_01465;Name=AO053_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01465
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	60121	61512	.	+	0	ID=cds-TMQ40497.1;Parent=gene-AO053_01465;Dbxref=NCBI_GP:TMQ40497.1;Name=TMQ40497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690476.1;locus_tag=AO053_01465;product=MFS transporter;protein_id=TMQ40497.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	61659	63302	.	+	.	ID=gene-AO053_01470;Name=AO053_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01470
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	61659	63302	.	+	0	ID=cds-TMQ40498.1;Parent=gene-AO053_01470;Dbxref=NCBI_GP:TMQ40498.1;Name=TMQ40498.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652480.1;locus_tag=AO053_01470;product=peptide transporter;protein_id=TMQ40498.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	63478	64239	.	+	.	ID=gene-AO053_01475;Name=AO053_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01475
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	63478	64239	.	+	0	ID=cds-TMQ40499.1;Parent=gene-AO053_01475;Dbxref=NCBI_GP:TMQ40499.1;Name=TMQ40499.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652481.1;locus_tag=AO053_01475;product=HugZ family heme oxygenase;protein_id=TMQ40499.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	64376	64723	.	-	.	ID=gene-AO053_01480;Name=AO053_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01480
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	64376	64723	.	-	0	ID=cds-TMQ40500.1;Parent=gene-AO053_01480;Dbxref=NCBI_GP:TMQ40500.1;Name=TMQ40500.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44904.1;locus_tag=AO053_01480;product=hypothetical protein;protein_id=TMQ40500.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	64749	67556	.	-	.	ID=gene-AO053_01485;Name=AO053_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01485
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	64749	67556	.	-	0	ID=cds-TMQ40501.1;Parent=gene-AO053_01485;Dbxref=NCBI_GP:TMQ40501.1;Name=TMQ40501.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526245.1;locus_tag=AO053_01485;product=DNA polymerase I;protein_id=TMQ40501.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	67705	68007	.	+	.	ID=gene-AO053_01490;Name=AO053_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01490
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	67705	68007	.	+	0	ID=cds-TMQ40502.1;Parent=gene-AO053_01490;Dbxref=NCBI_GP:TMQ40502.1;Name=TMQ40502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526244.1;locus_tag=AO053_01490;product=cell division protein ZapA;protein_id=TMQ40502.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	68317	68880	.	+	.	ID=gene-AO053_01495;Name=AO053_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01495
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	68317	68880	.	+	0	ID=cds-TMQ40503.1;Parent=gene-AO053_01495;Dbxref=NCBI_GP:TMQ40503.1;Name=TMQ40503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500940.1;locus_tag=AO053_01495;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=TMQ40503.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	69008	71578	.	+	.	ID=gene-AO053_01500;Name=AO053_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01500
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	69008	71578	.	+	0	ID=cds-TMQ40504.1;Parent=gene-AO053_01500;Dbxref=NCBI_GP:TMQ40504.1;Name=TMQ40504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701896.1;locus_tag=AO053_01500;product=ATP-dependent chaperone ClpB;protein_id=TMQ40504.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	71615	72355	.	-	.	ID=gene-AO053_01505;Name=AO053_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01505
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	71615	72355	.	-	0	ID=cds-TMQ40505.1;Parent=gene-AO053_01505;Dbxref=NCBI_GP:TMQ40505.1;Name=TMQ40505.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690506.1;locus_tag=AO053_01505;product=23S rRNA methyltransferase;protein_id=TMQ40505.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	72411	74759	.	-	.	ID=gene-AO053_01510;Name=AO053_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01510
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	72411	74759	.	-	0	ID=cds-TMQ40506.1;Parent=gene-AO053_01510;Dbxref=NCBI_GP:TMQ40506.1;Name=TMQ40506.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055265.1;locus_tag=AO053_01510;product=exoribonuclease R;protein_id=TMQ40506.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	74955	75236	.	+	.	ID=gene-AO053_01515;Name=AO053_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01515
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	74955	75236	.	+	0	ID=cds-TMQ40507.1;Parent=gene-AO053_01515;Dbxref=NCBI_GP:TMQ40507.1;Name=TMQ40507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526240.1;locus_tag=AO053_01515;product=virulence factor;protein_id=TMQ40507.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	76484	76900	.	+	.	ID=gene-AO053_01520;Name=AO053_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01520
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	76484	76900	.	+	0	ID=cds-TMQ40536.1;Parent=gene-AO053_01520;Dbxref=NCBI_GP:TMQ40536.1;Name=TMQ40536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663733.1;locus_tag=AO053_01520;product=hypothetical protein;protein_id=TMQ40536.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	76982	77689	.	-	.	ID=gene-AO053_01525;Name=AO053_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01525
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	76982	77689	.	-	0	ID=cds-TMQ40508.1;Parent=gene-AO053_01525;Dbxref=NCBI_GP:TMQ40508.1;Name=TMQ40508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701899.1;locus_tag=AO053_01525;product=hypothetical protein;protein_id=TMQ40508.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	77882	78514	.	+	.	ID=gene-AO053_01530;Name=AO053_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01530
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	77882	78514	.	+	0	ID=cds-TMQ40509.1;Parent=gene-AO053_01530;Dbxref=NCBI_GP:TMQ40509.1;Name=TMQ40509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055267.1;locus_tag=AO053_01530;product=pyridoxamine 5'-phosphate oxidase;protein_id=TMQ40509.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	78602	80452	.	-	.	ID=gene-AO053_01535;Name=AO053_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01535
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	78602	80452	.	-	0	ID=cds-TMQ40510.1;Parent=gene-AO053_01535;Dbxref=NCBI_GP:TMQ40510.1;Name=TMQ40510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648234.1;locus_tag=AO053_01535;product=GTP-binding protein TypA;protein_id=TMQ40510.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	80684	82102	.	+	.	ID=gene-AO053_01540;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=AO053_01540
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	80684	82102	.	+	0	ID=cds-TMQ40511.1;Parent=gene-AO053_01540;Dbxref=NCBI_GP:TMQ40511.1;Name=TMQ40511.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701902.1;locus_tag=AO053_01540;product=glutamine synthetase;protein_id=TMQ40511.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	82189	83232	.	+	.	ID=gene-AO053_01545;Name=AO053_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01545
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	82189	83232	.	+	0	ID=cds-TMQ40512.1;Parent=gene-AO053_01545;Dbxref=NCBI_GP:TMQ40512.1;Name=TMQ40512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526235.1;locus_tag=AO053_01545;product=dTDP-glucose 4%2C6-dehydratase;protein_id=TMQ40512.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	83311	84615	.	+	.	ID=gene-AO053_01550;Name=AO053_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01550
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	83311	84615	.	+	0	ID=cds-TMQ40513.1;Parent=gene-AO053_01550;Dbxref=NCBI_GP:TMQ40513.1;Name=TMQ40513.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655773.1;locus_tag=AO053_01550;product=aminopeptidase;protein_id=TMQ40513.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	84625	85047	.	+	.	ID=gene-AO053_01555;Name=AO053_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01555
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	84625	85047	.	+	0	ID=cds-TMQ40514.1;Parent=gene-AO053_01555;Dbxref=NCBI_GP:TMQ40514.1;Name=TMQ40514.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686088.1;locus_tag=AO053_01555;product=nucleoside diphosphate kinase;protein_id=TMQ40514.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	85117	86367	.	-	.	ID=gene-AO053_01560;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=AO053_01560
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	85117	86367	.	-	0	ID=cds-TMQ40515.1;Parent=gene-AO053_01560;Dbxref=NCBI_GP:TMQ40515.1;Name=TMQ40515.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689138.1;locus_tag=AO053_01560;product=GTPase Obg;protein_id=TMQ40515.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	86395	87315	.	-	.	ID=gene-AO053_01565;Name=AO053_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01565
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	86395	87315	.	-	0	ID=cds-TMQ40516.1;Parent=gene-AO053_01565;Dbxref=NCBI_GP:TMQ40516.1;Name=TMQ40516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526232.1;locus_tag=AO053_01565;product=transporter;protein_id=TMQ40516.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	87396	87653	.	-	.	ID=gene-AO053_01570;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AO053_01570
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	87396	87653	.	-	0	ID=cds-TMQ40517.1;Parent=gene-AO053_01570;Dbxref=NCBI_GP:TMQ40517.1;Name=TMQ40517.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005559148.1;locus_tag=AO053_01570;product=50S ribosomal protein L27;protein_id=TMQ40517.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	87674	87985	.	-	.	ID=gene-AO053_01575;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AO053_01575
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	87674	87985	.	-	0	ID=cds-TMQ40518.1;Parent=gene-AO053_01575;Dbxref=NCBI_GP:TMQ40518.1;Name=TMQ40518.1;gbkey=CDS;gene=rplU;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N3T7.1;locus_tag=AO053_01575;product=50S ribosomal protein L21;protein_id=TMQ40518.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	88200	89189	.	+	.	ID=gene-AO053_01580;Name=AO053_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01580
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	88200	89189	.	+	0	ID=cds-TMQ40519.1;Parent=gene-AO053_01580;Dbxref=NCBI_GP:TMQ40519.1;Name=TMQ40519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44916.1;locus_tag=AO053_01580;product=octaprenyl diphosphate synthase;protein_id=TMQ40519.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	89239	89976	.	+	.	ID=gene-AO053_01585;Name=AO053_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01585
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	89239	89976	.	+	0	ID=cds-TMQ40520.1;Parent=gene-AO053_01585;Dbxref=NCBI_GP:TMQ40520.1;Name=TMQ40520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659068.1;locus_tag=AO053_01585;product=hypothetical protein;protein_id=TMQ40520.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	90035	91405	.	-	.	ID=gene-AO053_01590;Name=AO053_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01590
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	90035	91405	.	-	0	ID=cds-TMQ40521.1;Parent=gene-AO053_01590;Dbxref=NCBI_GP:TMQ40521.1;Name=TMQ40521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054564.1;locus_tag=AO053_01590;product=sodium:alanine symporter;protein_id=TMQ40521.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	91804	92514	.	-	.	ID=gene-AO053_01595;Name=AO053_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01595
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	91804	92514	.	-	0	ID=cds-TMQ40522.1;Parent=gene-AO053_01595;Dbxref=NCBI_GP:TMQ40522.1;Name=TMQ40522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690537.1;locus_tag=AO053_01595;product=two-component system response regulator;protein_id=TMQ40522.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	92706	94445	.	+	.	ID=gene-AO053_01600;Name=AO053_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01600
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	92706	94445	.	+	0	ID=cds-TMQ40523.1;Parent=gene-AO053_01600;Dbxref=NCBI_GP:TMQ40523.1;Name=TMQ40523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526227.1;locus_tag=AO053_01600;product=thiol:disulfide interchange protein;protein_id=TMQ40523.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	94560	94964	.	+	.	ID=gene-AO053_01605;Name=AO053_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01605
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	94560	94964	.	+	0	ID=cds-TMQ40524.1;Parent=gene-AO053_01605;Dbxref=NCBI_GP:TMQ40524.1;Name=TMQ40524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631262.1;locus_tag=AO053_01605;product=hypothetical protein;protein_id=TMQ40524.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	95152	96750	.	+	.	ID=gene-AO053_01610;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AO053_01610
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	95152	96750	.	+	0	ID=cds-TMQ40525.1;Parent=gene-AO053_01610;Dbxref=NCBI_GP:TMQ40525.1;Name=TMQ40525.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526225.1;locus_tag=AO053_01610;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=TMQ40525.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	96935	98224	.	+	.	ID=gene-AO053_01615;Name=AO053_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01615
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	96935	98224	.	+	0	ID=cds-TMQ40526.1;Parent=gene-AO053_01615;Dbxref=NCBI_GP:TMQ40526.1;Name=TMQ40526.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655798.1;locus_tag=AO053_01615;product=phosphoribosylamine--glycine ligase;protein_id=TMQ40526.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	98348	99613	.	+	.	ID=gene-AO053_01620;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AO053_01620
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	98348	99613	.	+	0	ID=cds-TMQ40527.1;Parent=gene-AO053_01620;Dbxref=NCBI_GP:TMQ40527.1;Name=TMQ40527.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631268.1;locus_tag=AO053_01620;product=serine hydroxymethyltransferase;protein_id=TMQ40527.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	99684	100304	.	+	.	ID=gene-AO053_01625;Name=AO053_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01625
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	99684	100304	.	+	0	ID=cds-TMQ40528.1;Parent=gene-AO053_01625;Dbxref=NCBI_GP:TMQ40528.1;Name=TMQ40528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655803.1;locus_tag=AO053_01625;product=dephospho-CoA kinase;protein_id=TMQ40528.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	100297	100503	.	+	.	ID=gene-AO053_01630;Name=AO053_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01630
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	100297	100503	.	+	0	ID=cds-TMQ40529.1;Parent=gene-AO053_01630;Dbxref=NCBI_GP:TMQ40529.1;Name=TMQ40529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634195.1;locus_tag=AO053_01630;product=DNA gyrase inhibitor;protein_id=TMQ40529.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	100620	101867	.	+	.	ID=gene-AO053_01635;Name=AO053_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01635
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	100620	101867	.	+	0	ID=cds-TMQ40530.1;Parent=gene-AO053_01635;Dbxref=NCBI_GP:TMQ40530.1;Name=TMQ40530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690543.1;locus_tag=AO053_01635;product=RNA helicase;protein_id=TMQ40530.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	102097	102660	.	+	.	ID=gene-AO053_01640;Name=AO053_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01640
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	102097	102660	.	+	0	ID=cds-TMQ40531.1;Parent=gene-AO053_01640;Dbxref=NCBI_GP:TMQ40531.1;Name=TMQ40531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625983.1;locus_tag=AO053_01640;product=TetR family transcriptional regulator;protein_id=TMQ40531.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	102691	103887	.	+	.	ID=gene-AO053_01645;Name=AO053_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01645
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	102691	103887	.	+	0	ID=cds-TMQ40532.1;Parent=gene-AO053_01645;Dbxref=NCBI_GP:TMQ40532.1;Name=TMQ40532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054558.1;locus_tag=AO053_01645;product=hypothetical protein;protein_id=TMQ40532.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	103905	106985	.	+	.	ID=gene-AO053_01650;Name=AO053_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01650
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	103905	106985	.	+	0	ID=cds-TMQ40533.1;Parent=gene-AO053_01650;Dbxref=NCBI_GP:TMQ40533.1;Name=TMQ40533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526218.1;locus_tag=AO053_01650;product=transporter;protein_id=TMQ40533.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	gene	107220	107990	.	+	.	ID=gene-AO053_01655;Name=AO053_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01655
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	107220	107990	.	+	0	ID=cds-TMQ40534.1;Parent=gene-AO053_01655;Dbxref=NCBI_GP:TMQ40534.1;Name=TMQ40534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686142.1;locus_tag=AO053_01655;product=cell division protein FtsN;protein_id=TMQ40534.1;transl_table=11
GCA_005888185.1|LNKP01000012.1	Genbank	pseudogene	108003	108659	.	-	.	ID=gene-AO053_01660;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=AO053_01660;pseudo=true
GCA_005888185.1|LNKP01000012.1	Protein Homology	CDS	108003	108659	.	-	0	ID=cds-AO053_01660;Parent=gene-AO053_01660;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:SwissProt:P44927.1;locus_tag=AO053_01660;pseudo=true;transl_table=11
##sequence-region LNKP01000013.1 1 77805
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000013.1	Genbank	region	1	77805	.	+	.	ID=LNKP01000013.1:1..77805;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000013.1	Genbank	pseudogene	1	876	.	-	.	ID=gene-AO053_01665;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=AO053_01665;pseudo=true
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	1	876	.	-	0	ID=cds-AO053_01665;Parent=gene-AO053_01665;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272272.1;locus_tag=AO053_01665;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	886	2058	.	-	.	ID=gene-AO053_01670;Name=AO053_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01670
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	886	2058	.	-	0	ID=cds-TMQ40227.1;Parent=gene-AO053_01670;Dbxref=NCBI_GP:TMQ40227.1;Name=TMQ40227.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272273.1;locus_tag=AO053_01670;product=multidrug transporter;protein_id=TMQ40227.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	2231	2713	.	-	.	ID=gene-AO053_01675;Name=AO053_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01675
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	2231	2713	.	-	0	ID=cds-TMQ40228.1;Parent=gene-AO053_01675;Dbxref=NCBI_GP:TMQ40228.1;Name=TMQ40228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635192.1;locus_tag=AO053_01675;product=dihydrofolate reductase;protein_id=TMQ40228.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	2814	3920	.	+	.	ID=gene-AO053_01680;Name=AO053_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01680
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	2814	3920	.	+	0	ID=cds-TMQ40229.1;Parent=gene-AO053_01680;Dbxref=NCBI_GP:TMQ40229.1;Name=TMQ40229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627016.1;locus_tag=AO053_01680;product=glutamate 5-kinase;protein_id=TMQ40229.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	4001	4591	.	+	.	ID=gene-AO053_01685;Name=AO053_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01685
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	4001	4591	.	+	0	ID=cds-TMQ40230.1;Parent=gene-AO053_01685;Dbxref=NCBI_GP:TMQ40230.1;Name=TMQ40230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57045.2;locus_tag=AO053_01685;product=RNA pyrophosphohydrolase;protein_id=TMQ40230.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	4591	5385	.	+	.	ID=gene-AO053_01690;Name=AO053_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01690
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	4591	5385	.	+	0	ID=cds-TMQ40231.1;Parent=gene-AO053_01690;Dbxref=NCBI_GP:TMQ40231.1;Name=TMQ40231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648117.1;locus_tag=AO053_01690;product=hypothetical protein;protein_id=TMQ40231.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	5394	6200	.	+	.	ID=gene-AO053_01695;Name=AO053_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01695
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	5394	6200	.	+	0	ID=cds-TMQ40232.1;Parent=gene-AO053_01695;Dbxref=NCBI_GP:TMQ40232.1;Name=TMQ40232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44930.1;locus_tag=AO053_01695;product=prolipoprotein diacylglyceryl transferase;protein_id=TMQ40232.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	6210	7061	.	+	.	ID=gene-AO053_01700;Name=AO053_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01700
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	6210	7061	.	+	0	ID=cds-TMQ40233.1;Parent=gene-AO053_01700;Dbxref=NCBI_GP:TMQ40233.1;Name=TMQ40233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758568.1;locus_tag=AO053_01700;product=thymidylate synthase;protein_id=TMQ40233.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	7061	7582	.	+	.	ID=gene-AO053_01705;Name=AO053_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01705
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	7061	7582	.	+	0	ID=cds-TMQ40234.1;Parent=gene-AO053_01705;Dbxref=NCBI_GP:TMQ40234.1;Name=TMQ40234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995566.1;locus_tag=AO053_01705;product=tRNA adenosine deaminase;protein_id=TMQ40234.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	7610	7924	.	-	.	ID=gene-AO053_01710;Name=AO053_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01710
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	7610	7924	.	-	0	ID=cds-TMQ40235.1;Parent=gene-AO053_01710;Dbxref=NCBI_GP:TMQ40235.1;Name=TMQ40235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686159.1;locus_tag=AO053_01710;product=hypothetical protein;protein_id=TMQ40235.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	8004	8306	.	+	.	ID=gene-AO053_01715;Name=AO053_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01715
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	8004	8306	.	+	0	ID=cds-TMQ40236.1;Parent=gene-AO053_01715;Dbxref=NCBI_GP:TMQ40236.1;Name=TMQ40236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701928.1;locus_tag=AO053_01715;product=hypothetical protein;protein_id=TMQ40236.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	8431	11136	.	+	.	ID=gene-AO053_01720;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=AO053_01720
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	8431	11136	.	+	0	ID=cds-TMQ40237.1;Parent=gene-AO053_01720;Dbxref=NCBI_GP:TMQ40237.1;Name=TMQ40237.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526208.1;locus_tag=AO053_01720;product=preprotein translocase subunit SecA;protein_id=TMQ40237.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	11201	11611	.	+	.	ID=gene-AO053_01725;Name=AO053_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01725
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	11201	11611	.	+	0	ID=cds-TMQ40238.1;Parent=gene-AO053_01725;Dbxref=NCBI_GP:TMQ40238.1;Name=TMQ40238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648100.1;locus_tag=AO053_01725;product=8-oxo-dGTP diphosphatase;protein_id=TMQ40238.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	11720	13576	.	+	.	ID=gene-AO053_01730;Name=AO053_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01730
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	11720	13576	.	+	0	ID=cds-TMQ40239.1;Parent=gene-AO053_01730;Dbxref=NCBI_GP:TMQ40239.1;Name=TMQ40239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686166.1;locus_tag=AO053_01730;product=potassium transporter;protein_id=TMQ40239.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	13677	14441	.	+	.	ID=gene-AO053_01735;Name=AO053_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01735
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	13677	14441	.	+	0	ID=cds-TMQ40240.1;Parent=gene-AO053_01735;Dbxref=NCBI_GP:TMQ40240.1;Name=TMQ40240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631247.1;locus_tag=AO053_01735;product=hypothetical protein;protein_id=TMQ40240.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	14619	15341	.	+	.	ID=gene-AO053_01740;Name=AO053_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01740
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	14619	15341	.	+	0	ID=cds-TMQ40241.1;Parent=gene-AO053_01740;Dbxref=NCBI_GP:TMQ40241.1;Name=TMQ40241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44371.4;locus_tag=AO053_01740;product=30S ribosomal protein S2;protein_id=TMQ40241.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	15475	16326	.	+	.	ID=gene-AO053_01745;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AO053_01745
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	15475	16326	.	+	0	ID=cds-TMQ40242.1;Parent=gene-AO053_01745;Dbxref=NCBI_GP:TMQ40242.1;Name=TMQ40242.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524524.1;locus_tag=AO053_01745;product=elongation factor Ts;protein_id=TMQ40242.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	16504	17529	.	-	.	ID=gene-AO053_01750;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AO053_01750
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	16504	17529	.	-	0	ID=cds-TMQ40243.1;Parent=gene-AO053_01750;Dbxref=NCBI_GP:TMQ40243.1;Name=TMQ40243.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499730.1;locus_tag=AO053_01750;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=TMQ40243.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	17542	18135	.	-	.	ID=gene-AO053_01755;Name=AO053_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01755
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	17542	18135	.	-	0	ID=cds-TMQ40244.1;Parent=gene-AO053_01755;Dbxref=NCBI_GP:TMQ40244.1;Name=TMQ40244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690567.1;locus_tag=AO053_01755;product=hypothetical protein;protein_id=TMQ40244.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	18246	20624	.	-	.	ID=gene-AO053_01760;Name=AO053_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01760
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	18246	20624	.	-	0	ID=cds-TMQ40245.1;Parent=gene-AO053_01760;Dbxref=NCBI_GP:TMQ40245.1;Name=TMQ40245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688399.1;locus_tag=AO053_01760;product=outer membrane protein assembly factor BamA;protein_id=TMQ40245.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	20644	21975	.	-	.	ID=gene-AO053_01765;Name=AO053_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01765
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	20644	21975	.	-	0	ID=cds-TMQ40246.1;Parent=gene-AO053_01765;Dbxref=NCBI_GP:TMQ40246.1;Name=TMQ40246.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055296.1;locus_tag=AO053_01765;product=zinc metallopeptidase RseP;protein_id=TMQ40246.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	21985	22851	.	-	.	ID=gene-AO053_01770;Name=AO053_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01770
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	21985	22851	.	-	0	ID=cds-TMQ40247.1;Parent=gene-AO053_01770;Dbxref=NCBI_GP:TMQ40247.1;Name=TMQ40247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663617.1;locus_tag=AO053_01770;product=phosphatidate cytidylyltransferase;protein_id=TMQ40247.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	22869	23588	.	-	.	ID=gene-AO053_01775;Name=AO053_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01775
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	22869	23588	.	-	0	ID=cds-TMQ40248.1;Parent=gene-AO053_01775;Dbxref=NCBI_GP:TMQ40248.1;Name=TMQ40248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995578.1;locus_tag=AO053_01775;product=UDP pyrophosphate synthase;protein_id=TMQ40248.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	23837	26422	.	+	.	ID=gene-AO053_01780;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AO053_01780
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	23837	26422	.	+	0	ID=cds-TMQ40249.1;Parent=gene-AO053_01780;Dbxref=NCBI_GP:TMQ40249.1;Name=TMQ40249.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLY8.1;locus_tag=AO053_01780;product=leucine--tRNA ligase;protein_id=TMQ40249.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	26517	27020	.	+	.	ID=gene-AO053_01785;Name=AO053_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01785
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	26517	27020	.	+	0	ID=cds-TMQ40250.1;Parent=gene-AO053_01785;Dbxref=NCBI_GP:TMQ40250.1;Name=TMQ40250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57457.2;locus_tag=AO053_01785;product=hypothetical protein;protein_id=TMQ40250.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	27020	28054	.	+	.	ID=gene-AO053_01790;Name=AO053_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01790
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	27020	28054	.	+	0	ID=cds-TMQ40251.1;Parent=gene-AO053_01790;Dbxref=NCBI_GP:TMQ40251.1;Name=TMQ40251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43747.1;locus_tag=AO053_01790;product=DNA polymerase III subunit delta;protein_id=TMQ40251.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	28862	29044	.	-	.	ID=gene-AO053_01795;Name=AO053_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01795
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	28862	29044	.	-	0	ID=cds-TMQ40310.1;Parent=gene-AO053_01795;Dbxref=NCBI_GP:TMQ40310.1;Name=TMQ40310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690584.1;locus_tag=AO053_01795;product=hypothetical protein;protein_id=TMQ40310.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Protein Homology	pseudogene	29124	29413	.	-	.	ID=gene-AO053_01800;Name=AO053_01800;Note=disrupted;description=addiction module toxin RelE;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_01800;pseudo=true
GCA_005888185.1|LNKP01000013.1	Genbank	gene	29403	29657	.	-	.	ID=gene-AO053_01805;Name=AO053_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01805
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	29403	29657	.	-	0	ID=cds-TMQ40252.1;Parent=gene-AO053_01805;Dbxref=NCBI_GP:TMQ40252.1;Name=TMQ40252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690588.1;locus_tag=AO053_01805;product=stability protein StbD;protein_id=TMQ40252.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	29748	29954	.	-	.	ID=gene-AO053_01810;Name=AO053_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01810
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	29748	29954	.	-	0	ID=cds-TMQ40253.1;Parent=gene-AO053_01810;Dbxref=NCBI_GP:TMQ40253.1;Name=TMQ40253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526198.1;locus_tag=AO053_01810;product=hypothetical protein;protein_id=TMQ40253.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	29962	30186	.	-	.	ID=gene-AO053_01815;Name=AO053_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01815
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	29962	30186	.	-	0	ID=cds-TMQ40254.1;Parent=gene-AO053_01815;Dbxref=NCBI_GP:TMQ40254.1;Name=TMQ40254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701942.1;locus_tag=AO053_01815;product=hypothetical protein;protein_id=TMQ40254.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	30195	30494	.	-	.	ID=gene-AO053_01820;Name=AO053_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01820
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	30195	30494	.	-	0	ID=cds-TMQ40255.1;Parent=gene-AO053_01820;Dbxref=NCBI_GP:TMQ40255.1;Name=TMQ40255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526196.1;locus_tag=AO053_01820;product=major capsid protein;protein_id=TMQ40255.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	30850	30926	.	-	.	ID=gene-AO053_01825;Name=AO053_01825;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_01825
GCA_005888185.1|LNKP01000013.1	tRNAscan-SE	tRNA	30850	30926	.	-	.	ID=rna-AO053_01825;Parent=gene-AO053_01825;anticodon=(pos:complement(30890..30892));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_01825;product=tRNA-Met
GCA_005888185.1|LNKP01000013.1	tRNAscan-SE	exon	30850	30926	.	-	.	ID=exon-AO053_01825-1;Parent=rna-AO053_01825;anticodon=(pos:complement(30890..30892));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_01825;product=tRNA-Met
GCA_005888185.1|LNKP01000013.1	Genbank	gene	31012	33078	.	-	.	ID=gene-AO053_01830;Name=AO053_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01830
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	31012	33078	.	-	0	ID=cds-TMQ40256.1;Parent=gene-AO053_01830;Dbxref=NCBI_GP:TMQ40256.1;Name=TMQ40256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43822.1;locus_tag=AO053_01830;product=glycine--tRNA ligase subunit beta;protein_id=TMQ40256.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	33416	33781	.	-	.	ID=gene-AO053_01835;Name=AO053_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01835
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	33416	33781	.	-	0	ID=cds-TMQ40257.1;Parent=gene-AO053_01835;Dbxref=NCBI_GP:TMQ40257.1;Name=TMQ40257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669560.1;locus_tag=AO053_01835;product=hypothetical protein;protein_id=TMQ40257.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	33811	34071	.	-	.	ID=gene-AO053_01840;Name=AO053_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01840
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	33811	34071	.	-	0	ID=cds-TMQ40258.1;Parent=gene-AO053_01840;Dbxref=NCBI_GP:TMQ40258.1;Name=TMQ40258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526193.1;locus_tag=AO053_01840;product=hypothetical protein;protein_id=TMQ40258.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	34130	35038	.	-	.	ID=gene-AO053_01845;Name=AO053_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01845
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	34130	35038	.	-	0	ID=cds-TMQ40259.1;Parent=gene-AO053_01845;Dbxref=NCBI_GP:TMQ40259.1;Name=TMQ40259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UDE0.1;locus_tag=AO053_01845;product=glycyl-tRNA synthetase subunit alpha;protein_id=TMQ40259.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	35301	36827	.	+	.	ID=gene-AO053_01850;Name=AO053_01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01850
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	35301	36827	.	+	0	ID=cds-TMQ40260.1;Parent=gene-AO053_01850;Dbxref=NCBI_GP:TMQ40260.1;Name=TMQ40260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995588.1;locus_tag=AO053_01850;product=catalase;protein_id=TMQ40260.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	37059	38240	.	-	.	ID=gene-AO053_01855;Name=AO053_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01855
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	37059	38240	.	-	0	ID=cds-TMQ40261.1;Parent=gene-AO053_01855;Dbxref=NCBI_GP:TMQ40261.1;Name=TMQ40261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44940.1;locus_tag=AO053_01855;product=hypothetical protein;protein_id=TMQ40261.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	38241	38822	.	-	.	ID=gene-AO053_01860;Name=AO053_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01860
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	38241	38822	.	-	0	ID=cds-TMQ40262.1;Parent=gene-AO053_01860;Dbxref=NCBI_GP:TMQ40262.1;Name=TMQ40262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655898.1;locus_tag=AO053_01860;product=hypothetical protein;protein_id=TMQ40262.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	38835	39254	.	-	.	ID=gene-AO053_01865;Name=AO053_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01865
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	38835	39254	.	-	0	ID=cds-TMQ40263.1;Parent=gene-AO053_01865;Dbxref=NCBI_GP:TMQ40263.1;Name=TMQ40263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627705.1;locus_tag=AO053_01865;product=hypothetical protein;protein_id=TMQ40263.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	39338	40648	.	-	.	ID=gene-AO053_01870;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AO053_01870
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	39338	40648	.	-	0	ID=cds-TMQ40264.1;Parent=gene-AO053_01870;Dbxref=NCBI_GP:TMQ40264.1;Name=TMQ40264.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663563.1;locus_tag=AO053_01870;product=enolase;protein_id=TMQ40264.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Protein Homology	pseudogene	40769	41975	.	-	.	ID=gene-AO053_01875;Name=AO053_01875;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_01875;pseudo=true
GCA_005888185.1|LNKP01000013.1	Genbank	gene	41972	43129	.	-	.	ID=gene-AO053_01880;Name=AO053_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01880
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	41972	43129	.	-	0	ID=cds-TMQ40265.1;Parent=gene-AO053_01880;Dbxref=NCBI_GP:TMQ40265.1;Name=TMQ40265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666028.1;locus_tag=AO053_01880;product=nitrite reductase;protein_id=TMQ40265.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	43126	43656	.	-	.	ID=gene-AO053_01885;Name=AO053_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01885
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	43126	43656	.	-	0	ID=cds-TMQ40266.1;Parent=gene-AO053_01885;Dbxref=NCBI_GP:TMQ40266.1;Name=TMQ40266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526186.1;locus_tag=AO053_01885;product=disulfide bond formation protein DsbE;protein_id=TMQ40266.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	43656	45563	.	-	.	ID=gene-AO053_01890;Name=AO053_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01890
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	43656	45563	.	-	0	ID=cds-TMQ40267.1;Parent=gene-AO053_01890;Dbxref=NCBI_GP:TMQ40267.1;Name=TMQ40267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44944.1;locus_tag=AO053_01890;product=cytochrome C biogenesis protein CcmF;protein_id=TMQ40267.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	45672	46475	.	-	.	ID=gene-AO053_01895;Name=AO053_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01895
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	45672	46475	.	-	0	ID=cds-TMQ40268.1;Parent=gene-AO053_01895;Dbxref=NCBI_GP:TMQ40268.1;Name=TMQ40268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631453.1;locus_tag=AO053_01895;product=inositol monophosphatase;protein_id=TMQ40268.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	46675	47187	.	+	.	ID=gene-AO053_01900;Name=AO053_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01900
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	46675	47187	.	+	0	ID=cds-TMQ40269.1;Parent=gene-AO053_01900;Dbxref=NCBI_GP:TMQ40269.1;Name=TMQ40269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551004.1;locus_tag=AO053_01900;product=hypothetical protein;protein_id=TMQ40269.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	47187	47903	.	+	.	ID=gene-AO053_01905;Name=AO053_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01905
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	47187	47903	.	+	0	ID=cds-TMQ40270.1;Parent=gene-AO053_01905;Dbxref=NCBI_GP:TMQ40270.1;Name=TMQ40270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526182.1;locus_tag=AO053_01905;product=hypothetical protein;protein_id=TMQ40270.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	47918	48601	.	+	.	ID=gene-AO053_01910;Name=AO053_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01910
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	47918	48601	.	+	0	ID=cds-TMQ40271.1;Parent=gene-AO053_01910;Dbxref=NCBI_GP:TMQ40271.1;Name=TMQ40271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526181.1;locus_tag=AO053_01910;product=hypothetical protein;protein_id=TMQ40271.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	48594	48881	.	+	.	ID=gene-AO053_01915;Name=AO053_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01915
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	48594	48881	.	+	0	ID=cds-TMQ40272.1;Parent=gene-AO053_01915;Dbxref=NCBI_GP:TMQ40272.1;Name=TMQ40272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648029.1;locus_tag=AO053_01915;product=hypothetical protein;protein_id=TMQ40272.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	48927	52307	.	+	.	ID=gene-AO053_01920;Name=AO053_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01920
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	48927	52307	.	+	0	ID=cds-TMQ40273.1;Parent=gene-AO053_01920;Dbxref=NCBI_GP:TMQ40273.1;Name=TMQ40273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701956.1;locus_tag=AO053_01920;product=exodeoxyribonuclease V subunit gamma;protein_id=TMQ40273.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	52362	52811	.	+	.	ID=gene-AO053_01925;Name=AO053_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01925
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	52362	52811	.	+	0	ID=cds-TMQ40274.1;Parent=gene-AO053_01925;Dbxref=NCBI_GP:TMQ40274.1;Name=TMQ40274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527273.1;locus_tag=AO053_01925;product=NrdR family transcriptional regulator;protein_id=TMQ40274.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	52814	53932	.	+	.	ID=gene-AO053_01930;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AO053_01930
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	52814	53932	.	+	0	ID=cds-TMQ40275.1;Parent=gene-AO053_01930;Dbxref=NCBI_GP:TMQ40275.1;Name=TMQ40275.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526178.1;locus_tag=AO053_01930;product=5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=TMQ40275.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	53933	54955	.	+	.	ID=gene-AO053_01935;Name=AO053_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01935
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	53933	54955	.	+	0	ID=cds-TMQ40276.1;Parent=gene-AO053_01935;Dbxref=NCBI_GP:TMQ40276.1;Name=TMQ40276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651554.1;locus_tag=AO053_01935;product=peptidase;protein_id=TMQ40276.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	55029	55844	.	-	.	ID=gene-AO053_01940;Name=AO053_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01940
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	55029	55844	.	-	0	ID=cds-TMQ40277.1;Parent=gene-AO053_01940;Dbxref=NCBI_GP:TMQ40277.1;Name=TMQ40277.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44948.3;locus_tag=AO053_01940;product=formamidopyrimidine-DNA glycosylase;protein_id=TMQ40277.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	56079	57614	.	-	.	ID=gene-AO053_01945;Name=AO053_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01945
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	56079	57614	.	-	0	ID=cds-TMQ40278.1;Parent=gene-AO053_01945;Dbxref=NCBI_GP:TMQ40278.1;Name=TMQ40278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664170.1;locus_tag=AO053_01945;product=2%2C4-diaminobutyrate decarboxylase;protein_id=TMQ40278.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	57805	59169	.	-	.	ID=gene-AO053_01950;Name=AO053_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01950
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	57805	59169	.	-	0	ID=cds-TMQ40279.1;Parent=gene-AO053_01950;Dbxref=NCBI_GP:TMQ40279.1;Name=TMQ40279.1;Note=catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686211.1;locus_tag=AO053_01950;product=diaminobutyrate--2-oxoglutarate aminotransferase;protein_id=TMQ40279.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	59517	59687	.	-	.	ID=gene-AO053_01955;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AO053_01955
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	59517	59687	.	-	0	ID=cds-TMQ40280.1;Parent=gene-AO053_01955;Dbxref=NCBI_GP:TMQ40280.1;Name=TMQ40280.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:SwissProt:B8F859.1;locus_tag=AO053_01955;product=50S ribosomal protein L33;protein_id=TMQ40280.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	59699	59935	.	-	.	ID=gene-AO053_01960;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AO053_01960
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	59699	59935	.	-	0	ID=cds-TMQ40281.1;Parent=gene-AO053_01960;Dbxref=NCBI_GP:TMQ40281.1;Name=TMQ40281.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018347033.1;locus_tag=AO053_01960;product=50S ribosomal protein L28;protein_id=TMQ40281.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	60149	60814	.	-	.	ID=gene-AO053_01965;Name=AO053_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01965
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	60149	60814	.	-	0	ID=cds-TMQ40282.1;Parent=gene-AO053_01965;Dbxref=NCBI_GP:TMQ40282.1;Name=TMQ40282.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLV5.2;locus_tag=AO053_01965;product=hypothetical protein;protein_id=TMQ40282.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	60977	62179	.	+	.	ID=gene-AO053_01970;Name=AO053_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01970
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	60977	62179	.	+	0	ID=cds-TMQ40283.1;Parent=gene-AO053_01970;Dbxref=NCBI_GP:TMQ40283.1;Name=TMQ40283.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055320.1;locus_tag=AO053_01970;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=TMQ40283.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	62227	62682	.	+	.	ID=gene-AO053_01975;Name=AO053_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01975
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	62227	62682	.	+	0	ID=cds-TMQ40284.1;Parent=gene-AO053_01975;Dbxref=NCBI_GP:TMQ40284.1;Name=TMQ40284.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550997.1;locus_tag=AO053_01975;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=TMQ40284.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	62686	63342	.	+	.	ID=gene-AO053_01980;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=AO053_01980
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	62686	63342	.	+	0	ID=cds-TMQ40285.1;Parent=gene-AO053_01980;Dbxref=NCBI_GP:TMQ40285.1;Name=TMQ40285.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550996.1;locus_tag=AO053_01980;product=division inhibitor protein;protein_id=TMQ40285.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	63364	63615	.	+	.	ID=gene-AO053_01985;Name=AO053_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01985
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	63364	63615	.	+	0	ID=cds-TMQ40286.1;Parent=gene-AO053_01985;Dbxref=NCBI_GP:TMQ40286.1;Name=TMQ40286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633331.1;locus_tag=AO053_01985;product=hypothetical protein;protein_id=TMQ40286.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	63600	64274	.	+	.	ID=gene-AO053_01990;Name=AO053_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_01990
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	63600	64274	.	+	0	ID=cds-TMQ40287.1;Parent=gene-AO053_01990;Dbxref=NCBI_GP:TMQ40287.1;Name=TMQ40287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690900.1;locus_tag=AO053_01990;product=cyclic AMP receptor protein;protein_id=TMQ40287.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	pseudogene	64639	65073	.	-	.	ID=gene-AO053_01995;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=AO053_01995;pseudo=true
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	64639	65073	.	-	0	ID=cds-AO053_01995;Parent=gene-AO053_01995;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;inference=EXISTENCE: similar to AA sequence:SwissProt:P44083.1;locus_tag=AO053_01995;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	65666	66382	.	-	.	ID=gene-AO053_02000;Name=AO053_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02000
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	65666	66382	.	-	0	ID=cds-TMQ40288.1;Parent=gene-AO053_02000;Dbxref=NCBI_GP:TMQ40288.1;Name=TMQ40288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761253.1;locus_tag=AO053_02000;product=repressor;protein_id=TMQ40288.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	66558	66836	.	+	.	ID=gene-AO053_02005;Name=AO053_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02005
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	66558	66836	.	+	0	ID=cds-TMQ40289.1;Parent=gene-AO053_02005;Dbxref=NCBI_GP:TMQ40289.1;Name=TMQ40289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761255.1;locus_tag=AO053_02005;product=DNA-binding protein;protein_id=TMQ40289.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	66880	68865	.	+	.	ID=gene-AO053_02010;Name=AO053_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02010
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	66880	68865	.	+	0	ID=cds-TMQ40290.1;Parent=gene-AO053_02010;Dbxref=NCBI_GP:TMQ40290.1;Name=TMQ40290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526171.1;locus_tag=AO053_02010;product=transposase;protein_id=TMQ40290.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	68876	69274	.	+	.	ID=gene-AO053_02015;Name=AO053_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02015
GCA_005888185.1|LNKP01000013.1	GeneMarkS+	CDS	68876	69274	.	+	0	ID=cds-TMQ40291.1;Parent=gene-AO053_02015;Dbxref=NCBI_GP:TMQ40291.1;Name=TMQ40291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_02015;product=hypothetical protein;protein_id=TMQ40291.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Protein Homology	pseudogene	69326	70206	.	+	.	ID=gene-AO053_02020;Name=AO053_02020;Note=disrupted;description=transcriptional regulator;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02020;pseudo=true
GCA_005888185.1|LNKP01000013.1	Genbank	gene	70218	70514	.	+	.	ID=gene-AO053_02025;Name=AO053_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02025
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	70218	70514	.	+	0	ID=cds-TMQ40292.1;Parent=gene-AO053_02025;Dbxref=NCBI_GP:TMQ40292.1;Name=TMQ40292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527864.1;locus_tag=AO053_02025;product=sulfate transporter;protein_id=TMQ40292.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	70523	70714	.	+	.	ID=gene-AO053_02030;Name=AO053_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02030
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	70523	70714	.	+	0	ID=cds-TMQ40293.1;Parent=gene-AO053_02030;Dbxref=NCBI_GP:TMQ40293.1;Name=TMQ40293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688597.1;locus_tag=AO053_02030;product=hypothetical protein;protein_id=TMQ40293.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	70715	71332	.	+	.	ID=gene-AO053_02035;Name=AO053_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02035
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	70715	71332	.	+	0	ID=cds-TMQ40294.1;Parent=gene-AO053_02035;Dbxref=NCBI_GP:TMQ40294.1;Name=TMQ40294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526168.1;locus_tag=AO053_02035;product=sulfate transporter;protein_id=TMQ40294.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	71519	71716	.	+	.	ID=gene-AO053_02040;Name=AO053_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02040
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	71519	71716	.	+	0	ID=cds-TMQ40295.1;Parent=gene-AO053_02040;Dbxref=NCBI_GP:TMQ40295.1;Name=TMQ40295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641531.1;locus_tag=AO053_02040;product=hypothetical protein;protein_id=TMQ40295.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	71888	72061	.	+	.	ID=gene-AO053_02045;Name=AO053_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02045
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	71888	72061	.	+	0	ID=cds-TMQ40296.1;Parent=gene-AO053_02045;Dbxref=NCBI_GP:TMQ40296.1;Name=TMQ40296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758675.1;locus_tag=AO053_02045;product=FMN-dependent NADH-azoreductase;protein_id=TMQ40296.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	72066	72314	.	+	.	ID=gene-AO053_02050;Name=AO053_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02050
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	72066	72314	.	+	0	ID=cds-TMQ40297.1;Parent=gene-AO053_02050;Dbxref=NCBI_GP:TMQ40297.1;Name=TMQ40297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996624.1;locus_tag=AO053_02050;product=hypothetical protein;protein_id=TMQ40297.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	72555	72953	.	+	.	ID=gene-AO053_02055;Name=AO053_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02055
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	72555	72953	.	+	0	ID=cds-TMQ40298.1;Parent=gene-AO053_02055;Dbxref=NCBI_GP:TMQ40298.1;Name=TMQ40298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996625.1;locus_tag=AO053_02055;product=hypothetical protein;protein_id=TMQ40298.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	72980	73183	.	+	.	ID=gene-AO053_02060;Name=AO053_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02060
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	72980	73183	.	+	0	ID=cds-TMQ40299.1;Parent=gene-AO053_02060;Dbxref=NCBI_GP:TMQ40299.1;Name=TMQ40299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013796058.1;locus_tag=AO053_02060;product=hypothetical protein;protein_id=TMQ40299.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	73720	74361	.	+	.	ID=gene-AO053_02065;Name=AO053_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02065
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	73720	74361	.	+	0	ID=cds-TMQ40300.1;Parent=gene-AO053_02065;Dbxref=NCBI_GP:TMQ40300.1;Name=TMQ40300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526166.1;locus_tag=AO053_02065;product=antirepressor;protein_id=TMQ40300.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	74372	74590	.	+	.	ID=gene-AO053_02070;Name=AO053_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02070
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	74372	74590	.	+	0	ID=cds-TMQ40301.1;Parent=gene-AO053_02070;Dbxref=NCBI_GP:TMQ40301.1;Name=TMQ40301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641522.1;locus_tag=AO053_02070;product=hypothetical protein;protein_id=TMQ40301.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	74716	74892	.	+	.	ID=gene-AO053_02075;Name=AO053_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02075
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	74716	74892	.	+	0	ID=cds-TMQ40302.1;Parent=gene-AO053_02075;Dbxref=NCBI_GP:TMQ40302.1;Name=TMQ40302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010848235.1;locus_tag=AO053_02075;product=mRNA interferase;protein_id=TMQ40302.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	74947	75363	.	+	.	ID=gene-AO053_02080;Name=AO053_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02080
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	74947	75363	.	+	0	ID=cds-TMQ40303.1;Parent=gene-AO053_02080;Dbxref=NCBI_GP:TMQ40303.1;Name=TMQ40303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526165.1;locus_tag=AO053_02080;product=transcriptional regulator;protein_id=TMQ40303.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	75475	75903	.	+	.	ID=gene-AO053_02085;Name=AO053_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02085
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	75475	75903	.	+	0	ID=cds-TMQ40304.1;Parent=gene-AO053_02085;Dbxref=NCBI_GP:TMQ40304.1;Name=TMQ40304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641517.1;locus_tag=AO053_02085;product=mor transcription activator family protein;protein_id=TMQ40304.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	75984	76487	.	+	.	ID=gene-AO053_02090;Name=AO053_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02090
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	75984	76487	.	+	0	ID=cds-TMQ40305.1;Parent=gene-AO053_02090;Dbxref=NCBI_GP:TMQ40305.1;Name=TMQ40305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688575.1;locus_tag=AO053_02090;product=hypothetical protein;protein_id=TMQ40305.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	76641	76931	.	+	.	ID=gene-AO053_02095;Name=AO053_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02095
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	76641	76931	.	+	0	ID=cds-TMQ40306.1;Parent=gene-AO053_02095;Dbxref=NCBI_GP:TMQ40306.1;Name=TMQ40306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526162.1;locus_tag=AO053_02095;product=hypothetical protein;protein_id=TMQ40306.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	76931	77188	.	+	.	ID=gene-AO053_02100;Name=AO053_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02100
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	76931	77188	.	+	0	ID=cds-TMQ40307.1;Parent=gene-AO053_02100;Dbxref=NCBI_GP:TMQ40307.1;Name=TMQ40307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688568.1;locus_tag=AO053_02100;product=hypothetical protein;protein_id=TMQ40307.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	77312	77569	.	+	.	ID=gene-AO053_02105;Name=AO053_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02105
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	77312	77569	.	+	0	ID=cds-TMQ40308.1;Parent=gene-AO053_02105;Dbxref=NCBI_GP:TMQ40308.1;Name=TMQ40308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688566.1;locus_tag=AO053_02105;product=hypothetical protein;protein_id=TMQ40308.1;transl_table=11
GCA_005888185.1|LNKP01000013.1	Genbank	gene	77569	77805	.	+	.	ID=gene-AO053_02110;Name=AO053_02110;end_range=77805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02110;partial=true
GCA_005888185.1|LNKP01000013.1	Protein Homology	CDS	77569	77805	.	+	0	ID=cds-TMQ40309.1;Parent=gene-AO053_02110;Dbxref=NCBI_GP:TMQ40309.1;Name=TMQ40309.1;end_range=77805,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995441.1;locus_tag=AO053_02110;partial=true;product=hypothetical protein;protein_id=TMQ40309.1;transl_table=11
##sequence-region LNKP01000014.1 1 3507
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000014.1	Genbank	region	1	3507	.	+	.	ID=LNKP01000014.1:1..3507;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000014.1	Genbank	gene	17	517	.	+	.	ID=gene-AO053_02115;Name=AO053_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02115
GCA_005888185.1|LNKP01000014.1	Protein Homology	CDS	17	517	.	+	0	ID=cds-TMQ40177.1;Parent=gene-AO053_02115;Dbxref=NCBI_GP:TMQ40177.1;Name=TMQ40177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526160.1;locus_tag=AO053_02115;product=DNA-binding protein;protein_id=TMQ40177.1;transl_table=11
GCA_005888185.1|LNKP01000014.1	Genbank	gene	667	2316	.	+	.	ID=gene-AO053_02120;Name=AO053_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02120
GCA_005888185.1|LNKP01000014.1	Protein Homology	CDS	667	2316	.	+	0	ID=cds-TMQ40178.1;Parent=gene-AO053_02120;Dbxref=NCBI_GP:TMQ40178.1;Name=TMQ40178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526159.1;locus_tag=AO053_02120;product=hypothetical protein;protein_id=TMQ40178.1;transl_table=11
GCA_005888185.1|LNKP01000014.1	Genbank	gene	2396	3361	.	+	.	ID=gene-AO053_02125;Name=AO053_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02125
GCA_005888185.1|LNKP01000014.1	Protein Homology	CDS	2396	3361	.	+	0	ID=cds-TMQ40179.1;Parent=gene-AO053_02125;Dbxref=NCBI_GP:TMQ40179.1;Name=TMQ40179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642602.1;locus_tag=AO053_02125;product=hypothetical protein;protein_id=TMQ40179.1;transl_table=11
##sequence-region LNKP01000015.1 1 15220
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000015.1	Genbank	region	1	15220	.	+	.	ID=LNKP01000015.1:1..15220;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000015.1	Genbank	pseudogene	1	1132	.	-	.	ID=gene-AO053_02130;Name=AO053_02130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02130;pseudo=true
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	1	1132	.	-	0	ID=cds-AO053_02130;Parent=gene-AO053_02130;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525442.1;locus_tag=AO053_02130;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	1159	1683	.	-	.	ID=gene-AO053_02135;Name=AO053_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02135
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	1159	1683	.	-	0	ID=cds-TMQ40147.1;Parent=gene-AO053_02135;Dbxref=NCBI_GP:TMQ40147.1;Name=TMQ40147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536837.1;locus_tag=AO053_02135;product=phage tail protein;protein_id=TMQ40147.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	1693	2862	.	-	.	ID=gene-AO053_02140;Name=AO053_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02140
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	1693	2862	.	-	0	ID=cds-TMQ40148.1;Parent=gene-AO053_02140;Dbxref=NCBI_GP:TMQ40148.1;Name=TMQ40148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525444.1;locus_tag=AO053_02140;product=hypothetical protein;protein_id=TMQ40148.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	2855	3190	.	-	.	ID=gene-AO053_02145;Name=AO053_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02145
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	2855	3190	.	-	0	ID=cds-TMQ40149.1;Parent=gene-AO053_02145;Dbxref=NCBI_GP:TMQ40149.1;Name=TMQ40149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043499.1;locus_tag=AO053_02145;product=hypothetical protein;protein_id=TMQ40149.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	3194	5470	.	-	.	ID=gene-AO053_02150;Name=AO053_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02150
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	3194	5470	.	-	0	ID=cds-TMQ40150.1;Parent=gene-AO053_02150;Dbxref=NCBI_GP:TMQ40150.1;Name=TMQ40150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642940.1;locus_tag=AO053_02150;product=phage tail tape measure protein;protein_id=TMQ40150.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	5657	5965	.	-	.	ID=gene-AO053_02155;Name=AO053_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02155
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	5657	5965	.	-	0	ID=cds-TMQ40151.1;Parent=gene-AO053_02155;Dbxref=NCBI_GP:TMQ40151.1;Name=TMQ40151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642943.1;locus_tag=AO053_02155;product=hypothetical protein;protein_id=TMQ40151.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	6146	6493	.	-	.	ID=gene-AO053_02160;Name=AO053_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02160
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	6146	6493	.	-	0	ID=cds-TMQ40152.1;Parent=gene-AO053_02160;Dbxref=NCBI_GP:TMQ40152.1;Name=TMQ40152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525448.1;locus_tag=AO053_02160;product=hypothetical protein;protein_id=TMQ40152.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	6478	7038	.	-	.	ID=gene-AO053_02165;Name=AO053_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02165
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	6478	7038	.	-	0	ID=cds-TMQ40153.1;Parent=gene-AO053_02165;Dbxref=NCBI_GP:TMQ40153.1;Name=TMQ40153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667725.1;locus_tag=AO053_02165;product=lysozyme;protein_id=TMQ40153.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	7031	7267	.	-	.	ID=gene-AO053_02170;Name=AO053_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02170
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	7031	7267	.	-	0	ID=cds-TMQ40154.1;Parent=gene-AO053_02170;Dbxref=NCBI_GP:TMQ40154.1;Name=TMQ40154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043494.1;locus_tag=AO053_02170;product=holin;protein_id=TMQ40154.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	7354	7806	.	-	.	ID=gene-AO053_02175;Name=AO053_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02175
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	7354	7806	.	-	0	ID=cds-TMQ40155.1;Parent=gene-AO053_02175;Dbxref=NCBI_GP:TMQ40155.1;Name=TMQ40155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525450.1;locus_tag=AO053_02175;product=phage tail protein;protein_id=TMQ40155.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	7810	8940	.	-	.	ID=gene-AO053_02180;Name=AO053_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02180
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	7810	8940	.	-	0	ID=cds-TMQ40156.1;Parent=gene-AO053_02180;Dbxref=NCBI_GP:TMQ40156.1;Name=TMQ40156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525451.1;locus_tag=AO053_02180;product=phage tail protein;protein_id=TMQ40156.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	9202	9927	.	-	.	ID=gene-AO053_02185;Name=AO053_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02185
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	9202	9927	.	-	0	ID=cds-TMQ40157.1;Parent=gene-AO053_02185;Dbxref=NCBI_GP:TMQ40157.1;Name=TMQ40157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525452.1;locus_tag=AO053_02185;product=virion morphogenesis protein;protein_id=TMQ40157.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	9924	10406	.	-	.	ID=gene-AO053_02190;Name=AO053_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02190
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	9924	10406	.	-	0	ID=cds-TMQ40158.1;Parent=gene-AO053_02190;Dbxref=NCBI_GP:TMQ40158.1;Name=TMQ40158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525453.1;locus_tag=AO053_02190;product=hypothetical protein;protein_id=TMQ40158.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	10394	10846	.	-	.	ID=gene-AO053_02195;Name=AO053_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02195
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	10394	10846	.	-	0	ID=cds-TMQ40159.1;Parent=gene-AO053_02195;Dbxref=NCBI_GP:TMQ40159.1;Name=TMQ40159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642958.1;locus_tag=AO053_02195;product=head stabilization protein;protein_id=TMQ40159.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	10839	11657	.	-	.	ID=gene-AO053_02200;Name=AO053_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02200
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	10839	11657	.	-	0	ID=cds-TMQ40160.1;Parent=gene-AO053_02200;Dbxref=NCBI_GP:TMQ40160.1;Name=TMQ40160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525455.1;locus_tag=AO053_02200;product=terminase;protein_id=TMQ40160.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	11698	12708	.	-	.	ID=gene-AO053_02205;Name=AO053_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02205
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	11698	12708	.	-	0	ID=cds-TMQ40161.1;Parent=gene-AO053_02205;Dbxref=NCBI_GP:TMQ40161.1;Name=TMQ40161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043487.1;locus_tag=AO053_02205;product=capsid protein;protein_id=TMQ40161.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	12712	13599	.	-	.	ID=gene-AO053_02210;Name=AO053_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02210
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	12712	13599	.	-	0	ID=cds-TMQ40162.1;Parent=gene-AO053_02210;Dbxref=NCBI_GP:TMQ40162.1;Name=TMQ40162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525457.1;locus_tag=AO053_02210;product=phage capsid protein;protein_id=TMQ40162.1;transl_table=11
GCA_005888185.1|LNKP01000015.1	Genbank	gene	13803	15220	.	+	.	ID=gene-AO053_02215;Name=AO053_02215;end_range=15220,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02215;partial=true
GCA_005888185.1|LNKP01000015.1	Protein Homology	CDS	13803	15220	.	+	0	ID=cds-TMQ40163.1;Parent=gene-AO053_02215;Dbxref=NCBI_GP:TMQ40163.1;Name=TMQ40163.1;Note=gpP%3B P protein%3B capsid packaging%3B P protein is probably the ATPase subunit of the terminase complex%2C which directs cos cleavage of closed monomeric dsDNA circles into linear genomes with 19 nt cohesive ssDNA ends%3B Q%2C P and M proteins are needed to package DNA into capsid proheads and conversion into mature capsids;end_range=15220,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525458.1;locus_tag=AO053_02215;partial=true;product=terminase;protein_id=TMQ40163.1;transl_table=11
##sequence-region LNKP01000016.1 1 9922
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000016.1	Genbank	region	1	9922	.	+	.	ID=LNKP01000016.1:1..9922;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000016.1	Genbank	gene	1	251	.	+	.	ID=gene-AO053_02220;Name=AO053_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02220;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000016.1	GeneMarkS+	CDS	1	251	.	+	2	ID=cds-TMQ40082.1;Parent=gene-AO053_02220;Dbxref=NCBI_GP:TMQ40082.1;Name=TMQ40082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_02220;partial=true;product=hypothetical protein;protein_id=TMQ40082.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	375	1409	.	+	.	ID=gene-AO053_02225;Name=AO053_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02225
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	375	1409	.	+	0	ID=cds-TMQ40083.1;Parent=gene-AO053_02225;Dbxref=NCBI_GP:TMQ40083.1;Name=TMQ40083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525459.1;locus_tag=AO053_02225;product=phage portal protein;protein_id=TMQ40083.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	1491	1751	.	+	.	ID=gene-AO053_02230;Name=AO053_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02230
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	1491	1751	.	+	0	ID=cds-TMQ40084.1;Parent=gene-AO053_02230;Dbxref=NCBI_GP:TMQ40084.1;Name=TMQ40084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525460.1;locus_tag=AO053_02230;product=transcriptional regulator;protein_id=TMQ40084.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	1782	2189	.	-	.	ID=gene-AO053_02235;Name=AO053_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02235
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	1782	2189	.	-	0	ID=cds-TMQ40085.1;Parent=gene-AO053_02235;Dbxref=NCBI_GP:TMQ40085.1;Name=TMQ40085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525461.1;locus_tag=AO053_02235;product=hypothetical protein;protein_id=TMQ40085.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	2253	2432	.	-	.	ID=gene-AO053_02240;Name=AO053_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02240
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	2253	2432	.	-	0	ID=cds-TMQ40086.1;Parent=gene-AO053_02240;Dbxref=NCBI_GP:TMQ40086.1;Name=TMQ40086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017807138.1;locus_tag=AO053_02240;product=hypothetical protein;protein_id=TMQ40086.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	2512	3030	.	-	.	ID=gene-AO053_02245;Name=AO053_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02245
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	2512	3030	.	-	0	ID=cds-TMQ40087.1;Parent=gene-AO053_02245;Dbxref=NCBI_GP:TMQ40087.1;Name=TMQ40087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525462.1;locus_tag=AO053_02245;product=phage N-6-adenine-methyltransferase;protein_id=TMQ40087.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	3040	3345	.	-	.	ID=gene-AO053_02250;Name=AO053_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02250
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	3040	3345	.	-	0	ID=cds-TMQ40088.1;Parent=gene-AO053_02250;Dbxref=NCBI_GP:TMQ40088.1;Name=TMQ40088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525463.1;locus_tag=AO053_02250;product=hypothetical protein;protein_id=TMQ40088.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	3357	5696	.	-	.	ID=gene-AO053_02255;Name=AO053_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02255
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	3357	5696	.	-	0	ID=cds-TMQ40089.1;Parent=gene-AO053_02255;Dbxref=NCBI_GP:TMQ40089.1;Name=TMQ40089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525464.1;locus_tag=AO053_02255;product=replication protein;protein_id=TMQ40089.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	5757	6092	.	-	.	ID=gene-AO053_02260;Name=AO053_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02260
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	5757	6092	.	-	0	ID=cds-TMQ40090.1;Parent=gene-AO053_02260;Dbxref=NCBI_GP:TMQ40090.1;Name=TMQ40090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525465.1;locus_tag=AO053_02260;product=hypothetical protein;protein_id=TMQ40090.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	6111	6614	.	-	.	ID=gene-AO053_02265;Name=AO053_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02265
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	6111	6614	.	-	0	ID=cds-TMQ40091.1;Parent=gene-AO053_02265;Dbxref=NCBI_GP:TMQ40091.1;Name=TMQ40091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525466.1;locus_tag=AO053_02265;product=hypothetical protein;protein_id=TMQ40091.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	6747	6986	.	-	.	ID=gene-AO053_02270;Name=AO053_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02270
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	6747	6986	.	-	0	ID=cds-TMQ40092.1;Parent=gene-AO053_02270;Dbxref=NCBI_GP:TMQ40092.1;Name=TMQ40092.1;Note=phage-associated protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043472.1;locus_tag=AO053_02270;product=hypothetical protein;protein_id=TMQ40092.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	6983	7174	.	-	.	ID=gene-AO053_02275;Name=AO053_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02275
GCA_005888185.1|LNKP01000016.1	GeneMarkS+	CDS	6983	7174	.	-	0	ID=cds-TMQ40093.1;Parent=gene-AO053_02275;Dbxref=NCBI_GP:TMQ40093.1;Name=TMQ40093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_02275;product=hypothetical protein;protein_id=TMQ40093.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	7297	7671	.	+	.	ID=gene-AO053_02280;Name=AO053_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02280
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	7297	7671	.	+	0	ID=cds-TMQ40094.1;Parent=gene-AO053_02280;Dbxref=NCBI_GP:TMQ40094.1;Name=TMQ40094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525467.1;locus_tag=AO053_02280;product=chromosome partitioning protein ParA;protein_id=TMQ40094.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	8016	8258	.	+	.	ID=gene-AO053_02285;Name=AO053_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02285
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	8016	8258	.	+	0	ID=cds-TMQ40095.1;Parent=gene-AO053_02285;Dbxref=NCBI_GP:TMQ40095.1;Name=TMQ40095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643003.1;locus_tag=AO053_02285;product=hypothetical protein;protein_id=TMQ40095.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	8258	8461	.	+	.	ID=gene-AO053_02290;Name=AO053_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02290
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	8258	8461	.	+	0	ID=cds-TMQ40096.1;Parent=gene-AO053_02290;Dbxref=NCBI_GP:TMQ40096.1;Name=TMQ40096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355802.1;locus_tag=AO053_02290;product=hypothetical protein;protein_id=TMQ40096.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	8498	8725	.	+	.	ID=gene-AO053_02295;Name=AO053_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02295
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	8498	8725	.	+	0	ID=cds-TMQ40097.1;Parent=gene-AO053_02295;Dbxref=NCBI_GP:TMQ40097.1;Name=TMQ40097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005555659.1;locus_tag=AO053_02295;product=hypothetical protein;protein_id=TMQ40097.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	8707	9018	.	+	.	ID=gene-AO053_02300;Name=AO053_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02300
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	8707	9018	.	+	0	ID=cds-TMQ40098.1;Parent=gene-AO053_02300;Dbxref=NCBI_GP:TMQ40098.1;Name=TMQ40098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525468.1;locus_tag=AO053_02300;product=recombinase;protein_id=TMQ40098.1;transl_table=11
GCA_005888185.1|LNKP01000016.1	Genbank	gene	9021	9922	.	+	.	ID=gene-AO053_02305;Name=AO053_02305;end_range=9922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02305;partial=true
GCA_005888185.1|LNKP01000016.1	Protein Homology	CDS	9021	9922	.	+	0	ID=cds-TMQ40099.1;Parent=gene-AO053_02305;Dbxref=NCBI_GP:TMQ40099.1;Name=TMQ40099.1;end_range=9922,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_043466.1;locus_tag=AO053_02305;partial=true;product=integrase;protein_id=TMQ40099.1;transl_table=11
##sequence-region LNKP01000017.1 1 38925
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000017.1	Genbank	region	1	38925	.	+	.	ID=LNKP01000017.1:1..38925;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000017.1	Genbank	gene	378	453	.	+	.	ID=gene-AO053_02310;Name=AO053_02310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_02310
GCA_005888185.1|LNKP01000017.1	tRNAscan-SE	tRNA	378	453	.	+	.	ID=rna-AO053_02310;Parent=gene-AO053_02310;anticodon=(pos:411..413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_02310;product=tRNA-Lys
GCA_005888185.1|LNKP01000017.1	tRNAscan-SE	exon	378	453	.	+	.	ID=exon-AO053_02310-1;Parent=rna-AO053_02310;anticodon=(pos:411..413);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_02310;product=tRNA-Lys
GCA_005888185.1|LNKP01000017.1	Genbank	gene	661	1938	.	-	.	ID=gene-AO053_02315;Name=AO053_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02315
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	661	1938	.	-	0	ID=cds-TMQ40032.1;Parent=gene-AO053_02315;Dbxref=NCBI_GP:TMQ40032.1;Name=TMQ40032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658376.1;locus_tag=AO053_02315;product=threonine synthase;protein_id=TMQ40032.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	1981	2925	.	-	.	ID=gene-AO053_02320;Name=AO053_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02320
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	1981	2925	.	-	0	ID=cds-TMQ40033.1;Parent=gene-AO053_02320;Dbxref=NCBI_GP:TMQ40033.1;Name=TMQ40033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QP96.1;locus_tag=AO053_02320;product=homoserine kinase;protein_id=TMQ40033.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	2938	5385	.	-	.	ID=gene-AO053_02325;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=AO053_02325
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	2938	5385	.	-	0	ID=cds-TMQ40034.1;Parent=gene-AO053_02325;Dbxref=NCBI_GP:TMQ40034.1;Name=TMQ40034.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44505.1;locus_tag=AO053_02325;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=TMQ40034.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	5699	6400	.	+	.	ID=gene-AO053_02330;Name=AO053_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02330
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	5699	6400	.	+	0	ID=cds-TMQ40035.1;Parent=gene-AO053_02330;Dbxref=NCBI_GP:TMQ40035.1;Name=TMQ40035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995680.1;locus_tag=AO053_02330;product=YggS family pyridoxal phosphate enzyme;protein_id=TMQ40035.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	6474	7229	.	-	.	ID=gene-AO053_02335;Name=AO053_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02335
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	6474	7229	.	-	0	ID=cds-TMQ40036.1;Parent=gene-AO053_02335;Dbxref=NCBI_GP:TMQ40036.1;Name=TMQ40036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525473.1;locus_tag=AO053_02335;product=hypothetical protein;protein_id=TMQ40036.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	7338	7832	.	-	.	ID=gene-AO053_02340;Name=AO053_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02340
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	7338	7832	.	-	0	ID=cds-TMQ40058.1;Parent=gene-AO053_02340;Dbxref=NCBI_GP:TMQ40058.1;Name=TMQ40058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995675.1;locus_tag=AO053_02340;product=hypothetical protein;protein_id=TMQ40058.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	8467	10023	.	+	.	ID=gene-AO053_02345;Name=AO053_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02345
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	8467	10023	.	+	0	ID=cds-TMQ40037.1;Parent=gene-AO053_02345;Dbxref=NCBI_GP:TMQ40037.1;Name=TMQ40037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525474.1;locus_tag=AO053_02345;product=methyltransferase;protein_id=TMQ40037.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	10175	11173	.	+	.	ID=gene-AO053_02350;Name=AO053_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02350
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	10175	11173	.	+	0	ID=cds-TMQ40038.1;Parent=gene-AO053_02350;Dbxref=NCBI_GP:TMQ40038.1;Name=TMQ40038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P35755.3;locus_tag=AO053_02350;product=iron ABC transporter substrate-binding protein;protein_id=TMQ40038.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	11291	12811	.	+	.	ID=gene-AO053_02355;Name=AO053_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02355
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	11291	12811	.	+	0	ID=cds-TMQ40059.1;Parent=gene-AO053_02355;Dbxref=NCBI_GP:TMQ40059.1;Name=TMQ40059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701388.1;locus_tag=AO053_02355;product=Fe3+ dicitrate ABC transporter permease;protein_id=TMQ40059.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	12798	13868	.	+	.	ID=gene-AO053_02360;Name=AO053_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02360
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	12798	13868	.	+	0	ID=cds-TMQ40039.1;Parent=gene-AO053_02360;Dbxref=NCBI_GP:TMQ40039.1;Name=TMQ40039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44513.1;locus_tag=AO053_02360;product=peptide ABC transporter substrate-binding protein;protein_id=TMQ40039.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	13903	14583	.	-	.	ID=gene-AO053_02365;Name=AO053_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02365
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	13903	14583	.	-	0	ID=cds-TMQ40040.1;Parent=gene-AO053_02365;Dbxref=NCBI_GP:TMQ40040.1;Name=TMQ40040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634947.1;locus_tag=AO053_02365;product=peptidase M15;protein_id=TMQ40040.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	14585	15718	.	-	.	ID=gene-AO053_02370;Name=AO053_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02370
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	14585	15718	.	-	0	ID=cds-TMQ40041.1;Parent=gene-AO053_02370;Dbxref=NCBI_GP:TMQ40041.1;Name=TMQ40041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766881.1;locus_tag=AO053_02370;product=succinyl-diaminopimelate desuccinylase;protein_id=TMQ40041.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	15746	16090	.	-	.	ID=gene-AO053_02375;Name=AO053_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02375
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	15746	16090	.	-	0	ID=cds-TMQ40042.1;Parent=gene-AO053_02375;Dbxref=NCBI_GP:TMQ40042.1;Name=TMQ40042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625764.1;locus_tag=AO053_02375;product=arsenate reductase;protein_id=TMQ40042.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	16169	18049	.	-	.	ID=gene-AO053_02380;Name=AO053_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02380
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	16169	18049	.	-	0	ID=cds-TMQ40043.1;Parent=gene-AO053_02380;Dbxref=NCBI_GP:TMQ40043.1;Name=TMQ40043.1;Note=molecular chaperone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671989.1;locus_tag=AO053_02380;product=molecular chaperone HtpG;protein_id=TMQ40043.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	18365	19120	.	+	.	ID=gene-AO053_02385;Name=AO053_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02385
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	18365	19120	.	+	0	ID=cds-TMQ40044.1;Parent=gene-AO053_02385;Dbxref=NCBI_GP:TMQ40044.1;Name=TMQ40044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630686.1;locus_tag=AO053_02385;product=metal-binding protein;protein_id=TMQ40044.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	19296	21668	.	+	.	ID=gene-AO053_02390;Name=AO053_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02390
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	19296	21668	.	+	0	ID=cds-TMQ40045.1;Parent=gene-AO053_02390;Dbxref=NCBI_GP:TMQ40045.1;Name=TMQ40045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649662.1;locus_tag=AO053_02390;product=DNA methylase;protein_id=TMQ40045.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	21797	23260	.	+	.	ID=gene-AO053_02395;Name=AO053_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02395
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	21797	23260	.	+	0	ID=cds-TMQ40046.1;Parent=gene-AO053_02395;Dbxref=NCBI_GP:TMQ40046.1;Name=TMQ40046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649661.1;locus_tag=AO053_02395;product=ATPase;protein_id=TMQ40046.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	23432	24682	.	+	.	ID=gene-AO053_02400;Name=AO053_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02400
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	23432	24682	.	+	0	ID=cds-TMQ40047.1;Parent=gene-AO053_02400;Dbxref=NCBI_GP:TMQ40047.1;Name=TMQ40047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690936.1;locus_tag=AO053_02400;product=restriction endonuclease subunit S;protein_id=TMQ40047.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	24782	27808	.	+	.	ID=gene-AO053_02405;Name=AO053_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02405
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	24782	27808	.	+	0	ID=cds-TMQ40048.1;Parent=gene-AO053_02405;Dbxref=NCBI_GP:TMQ40048.1;Name=TMQ40048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271881.1;locus_tag=AO053_02405;product=DEAD/DEAH box helicase;protein_id=TMQ40048.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	28033	29412	.	-	.	ID=gene-AO053_02410;Name=AO053_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02410
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	28033	29412	.	-	0	ID=cds-TMQ40049.1;Parent=gene-AO053_02410;Dbxref=NCBI_GP:TMQ40049.1;Name=TMQ40049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271882.1;locus_tag=AO053_02410;product=signal recognition particle;protein_id=TMQ40049.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	29693	30955	.	+	.	ID=gene-AO053_02415;Name=AO053_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02415
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	29693	30955	.	+	0	ID=cds-TMQ40050.1;Parent=gene-AO053_02415;Dbxref=NCBI_GP:TMQ40050.1;Name=TMQ40050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57017.2;locus_tag=AO053_02415;product=magnesium/cobalt efflux protein;protein_id=TMQ40050.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	31084	31854	.	+	.	ID=gene-AO053_02420;Name=AO053_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02420
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	31084	31854	.	+	0	ID=cds-TMQ40051.1;Parent=gene-AO053_02420;Dbxref=NCBI_GP:TMQ40051.1;Name=TMQ40051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704932.1;locus_tag=AO053_02420;product=hypothetical protein;protein_id=TMQ40051.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	31856	32335	.	+	.	ID=gene-AO053_02425;Name=AO053_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02425
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	31856	32335	.	+	0	ID=cds-TMQ40052.1;Parent=gene-AO053_02425;Dbxref=NCBI_GP:TMQ40052.1;Name=TMQ40052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271885.1;locus_tag=AO053_02425;product=hypothetical protein;protein_id=TMQ40052.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	32425	32766	.	-	.	ID=gene-AO053_02430;Name=AO053_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02430
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	32425	32766	.	-	0	ID=cds-TMQ40053.1;Parent=gene-AO053_02430;Dbxref=NCBI_GP:TMQ40053.1;Name=TMQ40053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996344.1;locus_tag=AO053_02430;product=hypothetical protein;protein_id=TMQ40053.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	33121	34410	.	+	.	ID=gene-AO053_02435;Name=AO053_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02435
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	33121	34410	.	+	0	ID=cds-TMQ40054.1;Parent=gene-AO053_02435;Dbxref=NCBI_GP:TMQ40054.1;Name=TMQ40054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635412.1;locus_tag=AO053_02435;product=serine--tRNA ligase;protein_id=TMQ40054.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	34746	35375	.	+	.	ID=gene-AO053_02440;Name=AO053_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02440
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	34746	35375	.	+	0	ID=cds-TMQ40055.1;Parent=gene-AO053_02440;Dbxref=NCBI_GP:TMQ40055.1;Name=TMQ40055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527874.1;locus_tag=AO053_02440;product=glutathione S-transferase;protein_id=TMQ40055.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Protein Homology	pseudogene	35423	35579	.	-	.	ID=gene-AO053_02445;Name=AO053_02445;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02445;pseudo=true
GCA_005888185.1|LNKP01000017.1	Genbank	gene	35576	35812	.	-	.	ID=gene-AO053_02450;Name=AO053_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02450
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	35576	35812	.	-	0	ID=cds-TMQ40056.1;Parent=gene-AO053_02450;Dbxref=NCBI_GP:TMQ40056.1;Name=TMQ40056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664915.1;locus_tag=AO053_02450;product=hypothetical protein;protein_id=TMQ40056.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	35865	38102	.	+	.	ID=gene-AO053_02455;Name=AO053_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02455
GCA_005888185.1|LNKP01000017.1	Protein Homology	CDS	35865	38102	.	+	0	ID=cds-TMQ40057.1;Parent=gene-AO053_02455;Dbxref=NCBI_GP:TMQ40057.1;Name=TMQ40057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996340.1;locus_tag=AO053_02455;product=TonB-dependent receptor;protein_id=TMQ40057.1;transl_table=11
GCA_005888185.1|LNKP01000017.1	Genbank	gene	38826	38925	.	-	.	ID=gene-AO053_02460;Name=AO053_02460;end_range=38925,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=AO053_02460;partial=true
GCA_005888185.1|LNKP01000017.1	cmsearch	rRNA	38826	38925	.	-	.	ID=rna-AO053_02460;Parent=gene-AO053_02460;end_range=38925,.;gbkey=rRNA;locus_tag=AO053_02460;partial=true;product=5S ribosomal RNA
GCA_005888185.1|LNKP01000017.1	cmsearch	exon	38826	38925	.	-	.	ID=exon-AO053_02460-1;Parent=rna-AO053_02460;end_range=38925,.;gbkey=rRNA;locus_tag=AO053_02460;partial=true;product=5S ribosomal RNA
##sequence-region LNKP01000018.1 1 22610
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000018.1	Genbank	region	1	22610	.	+	.	ID=LNKP01000018.1:1..22610;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000018.1	Genbank	gene	1	337	.	-	.	ID=gene-AO053_02465;Name=AO053_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02465;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	1	337	.	-	0	ID=cds-TMQ39888.1;Parent=gene-AO053_02465;Dbxref=NCBI_GP:TMQ39888.1;Name=TMQ39888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690062.1;locus_tag=AO053_02465;partial=true;product=hypothetical protein;protein_id=TMQ39888.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	779	1210	.	-	.	ID=gene-AO053_02470;Name=AO053_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02470
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	779	1210	.	-	0	ID=cds-TMQ39889.1;Parent=gene-AO053_02470;Dbxref=NCBI_GP:TMQ39889.1;Name=TMQ39889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525783.1;locus_tag=AO053_02470;product=hypothetical protein;protein_id=TMQ39889.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	1288	2955	.	-	.	ID=gene-AO053_02475;Name=AO053_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02475
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	1288	2955	.	-	0	ID=cds-TMQ39890.1;Parent=gene-AO053_02475;Dbxref=NCBI_GP:TMQ39890.1;Name=TMQ39890.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996054.1;locus_tag=AO053_02475;product=glutaminyl-tRNA synthetase;protein_id=TMQ39890.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Protein Homology	pseudogene	3152	4548	.	-	.	ID=gene-AO053_02480;Name=AO053_02480;Note=disrupted;description=adhesin;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02480;pseudo=true
GCA_005888185.1|LNKP01000018.1	Genbank	gene	4898	5290	.	-	.	ID=gene-AO053_02485;Name=AO053_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02485
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	4898	5290	.	-	0	ID=cds-TMQ39891.1;Parent=gene-AO053_02485;Dbxref=NCBI_GP:TMQ39891.1;Name=TMQ39891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525780.1;locus_tag=AO053_02485;product=twitching motility protein PilT;protein_id=TMQ39891.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	5291	5551	.	-	.	ID=gene-AO053_02490;Name=AO053_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02490
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	5291	5551	.	-	0	ID=cds-TMQ39892.1;Parent=gene-AO053_02490;Dbxref=NCBI_GP:TMQ39892.1;Name=TMQ39892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996057.1;locus_tag=AO053_02490;product=virulence protein;protein_id=TMQ39892.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	5634	7109	.	-	.	ID=gene-AO053_02495;Name=AO053_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02495
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	5634	7109	.	-	0	ID=cds-TMQ39893.1;Parent=gene-AO053_02495;Dbxref=NCBI_GP:TMQ39893.1;Name=TMQ39893.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687243.1;locus_tag=AO053_02495;product=ribonuclease G;protein_id=TMQ39893.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	7225	8739	.	+	.	ID=gene-AO053_02500;Name=AO053_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02500
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	7225	8739	.	+	0	ID=cds-TMQ39894.1;Parent=gene-AO053_02500;Dbxref=NCBI_GP:TMQ39894.1;Name=TMQ39894.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687244.1;locus_tag=AO053_02500;product=proline:sodium symporter PutP;protein_id=TMQ39894.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	8736	9701	.	+	.	ID=gene-AO053_02505;Name=AO053_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02505
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	8736	9701	.	+	0	ID=cds-TMQ39895.1;Parent=gene-AO053_02505;Dbxref=NCBI_GP:TMQ39895.1;Name=TMQ39895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VMT0.1;locus_tag=AO053_02505;product=tRNA (mo5U34)-methyltransferase;protein_id=TMQ39895.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	9744	10622	.	-	.	ID=gene-AO053_02510;Name=AO053_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02510
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	9744	10622	.	-	0	ID=cds-TMQ39896.1;Parent=gene-AO053_02510;Dbxref=NCBI_GP:TMQ39896.1;Name=TMQ39896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694010.1;locus_tag=AO053_02510;product=cytidine deaminase;protein_id=TMQ39896.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	10896	11378	.	+	.	ID=gene-AO053_02515;Name=AO053_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02515
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	10896	11378	.	+	0	ID=cds-TMQ39897.1;Parent=gene-AO053_02515;Dbxref=NCBI_GP:TMQ39897.1;Name=TMQ39897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45173.1;locus_tag=AO053_02515;product=DNA starvation/stationary phase protection protein;protein_id=TMQ39897.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	pseudogene	11596	12612	.	-	.	ID=gene-AO053_02520;Name=AO053_02520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02520;pseudo=true
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	11596	12612	.	-	0	ID=cds-AO053_02520;Parent=gene-AO053_02520;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645339.1;locus_tag=AO053_02520;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	12909	14027	.	+	.	ID=gene-AO053_02525;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=AO053_02525
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	12909	14027	.	+	0	ID=cds-TMQ39898.1;Parent=gene-AO053_02525;Dbxref=NCBI_GP:TMQ39898.1;Name=TMQ39898.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;gbkey=CDS;gene=potA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694012.1;locus_tag=AO053_02525;product=Fe3+/spermidine/putrescine ABC transporter ATP-binding protein;protein_id=TMQ39898.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	14011	14871	.	+	.	ID=gene-AO053_02530;Name=AO053_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02530
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	14011	14871	.	+	0	ID=cds-TMQ39899.1;Parent=gene-AO053_02530;Dbxref=NCBI_GP:TMQ39899.1;Name=TMQ39899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698572.1;locus_tag=AO053_02530;product=spermidine/putrescine ABC transporter permease;protein_id=TMQ39899.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	14871	15641	.	+	.	ID=gene-AO053_02535;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=AO053_02535
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	14871	15641	.	+	0	ID=cds-TMQ39900.1;Parent=gene-AO053_02535;Dbxref=NCBI_GP:TMQ39900.1;Name=TMQ39900.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996068.1;locus_tag=AO053_02535;product=spermidine/putrescine ABC transporter permease;protein_id=TMQ39900.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	15771	16853	.	+	.	ID=gene-AO053_02540;Name=AO053_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02540
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	15771	16853	.	+	0	ID=cds-TMQ39906.1;Parent=gene-AO053_02540;Dbxref=NCBI_GP:TMQ39906.1;Name=TMQ39906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702225.1;locus_tag=AO053_02540;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=TMQ39906.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	16937	18880	.	-	.	ID=gene-AO053_02545;Name=AO053_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02545
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	16937	18880	.	-	0	ID=cds-TMQ39901.1;Parent=gene-AO053_02545;Dbxref=NCBI_GP:TMQ39901.1;Name=TMQ39901.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702183.1;locus_tag=AO053_02545;product=ABC transporter ATP-binding protein;protein_id=TMQ39901.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	18959	20314	.	-	.	ID=gene-AO053_02550;Name=AO053_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02550
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	18959	20314	.	-	0	ID=cds-TMQ39902.1;Parent=gene-AO053_02550;Dbxref=NCBI_GP:TMQ39902.1;Name=TMQ39902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500531.1;locus_tag=AO053_02550;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=TMQ39902.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	20437	21132	.	-	.	ID=gene-AO053_02555;Name=AO053_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02555
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	20437	21132	.	-	0	ID=cds-TMQ39903.1;Parent=gene-AO053_02555;Dbxref=NCBI_GP:TMQ39903.1;Name=TMQ39903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652869.1;locus_tag=AO053_02555;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=TMQ39903.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	21150	21572	.	-	.	ID=gene-AO053_02560;Name=AO053_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02560
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	21150	21572	.	-	0	ID=cds-TMQ39904.1;Parent=gene-AO053_02560;Dbxref=NCBI_GP:TMQ39904.1;Name=TMQ39904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK50.1;locus_tag=AO053_02560;product=hypothetical protein;protein_id=TMQ39904.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	gene	21688	22170	.	+	.	ID=gene-AO053_02565;Name=AO053_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02565
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	21688	22170	.	+	0	ID=cds-TMQ39905.1;Parent=gene-AO053_02565;Dbxref=NCBI_GP:TMQ39905.1;Name=TMQ39905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550720.1;locus_tag=AO053_02565;product=nuclease;protein_id=TMQ39905.1;transl_table=11
GCA_005888185.1|LNKP01000018.1	Genbank	pseudogene	22172	22610	.	+	.	ID=gene-AO053_02570;Name=AO053_02570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02570;pseudo=true
GCA_005888185.1|LNKP01000018.1	Protein Homology	CDS	22172	22610	.	+	0	ID=cds-AO053_02570;Parent=gene-AO053_02570;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637854.1;locus_tag=AO053_02570;pseudo=true;transl_table=11
##sequence-region LNKP01000019.1 1 1307
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000019.1	Genbank	region	1	1307	.	+	.	ID=LNKP01000019.1:1..1307;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000019.1	Genbank	gene	1	260	.	+	.	ID=gene-AO053_02575;Name=AO053_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02575;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000019.1	GeneMarkS+	CDS	1	260	.	+	2	ID=cds-TMQ39828.1;Parent=gene-AO053_02575;Dbxref=NCBI_GP:TMQ39828.1;Name=TMQ39828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_02575;partial=true;product=hypothetical protein;protein_id=TMQ39828.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000019.1	Genbank	gene	272	874	.	+	.	ID=gene-AO053_02580;Name=AO053_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02580
GCA_005888185.1|LNKP01000019.1	Protein Homology	CDS	272	874	.	+	0	ID=cds-TMQ39829.1;Parent=gene-AO053_02580;Dbxref=NCBI_GP:TMQ39829.1;Name=TMQ39829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527351.1;locus_tag=AO053_02580;product=hypothetical protein;protein_id=TMQ39829.1;transl_table=11
GCA_005888185.1|LNKP01000019.1	Genbank	gene	871	1307	.	+	.	ID=gene-AO053_02585;Name=AO053_02585;end_range=1307,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02585;partial=true
GCA_005888185.1|LNKP01000019.1	Protein Homology	CDS	871	1307	.	+	0	ID=cds-TMQ39830.1;Parent=gene-AO053_02585;Dbxref=NCBI_GP:TMQ39830.1;Name=TMQ39830.1;end_range=1307,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525915.1;locus_tag=AO053_02585;partial=true;product=enoyl-CoA hydratase;protein_id=TMQ39830.1;transl_table=11
##sequence-region LNKP01000020.1 1 9733
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000020.1	Genbank	region	1	9733	.	+	.	ID=LNKP01000020.1:1..9733;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000020.1	Genbank	gene	371	634	.	-	.	ID=gene-AO053_02590;Name=AO053_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02590
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	371	634	.	-	0	ID=cds-TMQ39809.1;Parent=gene-AO053_02590;Dbxref=NCBI_GP:TMQ39809.1;Name=TMQ39809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272529.1;locus_tag=AO053_02590;product=hypothetical protein;protein_id=TMQ39809.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Protein Homology	pseudogene	959	1715	.	-	.	ID=gene-AO053_02595;Name=rumB;Note=disrupted;description=23S rRNA methyltransferase;gbkey=Gene;gene=rumB;gene_biotype=pseudogene;locus_tag=AO053_02595;pseudo=true
GCA_005888185.1|LNKP01000020.1	Genbank	gene	1708	2763	.	-	.	ID=gene-AO053_02600;Name=AO053_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02600
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	1708	2763	.	-	0	ID=cds-TMQ39810.1;Parent=gene-AO053_02600;Dbxref=NCBI_GP:TMQ39810.1;Name=TMQ39810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44955.1;locus_tag=AO053_02600;product=beta-hexosaminidase;protein_id=TMQ39810.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	gene	2767	3117	.	-	.	ID=gene-AO053_02605;Name=AO053_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02605
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	2767	3117	.	-	0	ID=cds-TMQ39811.1;Parent=gene-AO053_02605;Dbxref=NCBI_GP:TMQ39811.1;Name=TMQ39811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627387.1;locus_tag=AO053_02605;product=hypothetical protein;protein_id=TMQ39811.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	gene	3117	3467	.	-	.	ID=gene-AO053_02610;Name=AO053_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02610
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	3117	3467	.	-	0	ID=cds-TMQ39812.1;Parent=gene-AO053_02610;Dbxref=NCBI_GP:TMQ39812.1;Name=TMQ39812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526149.1;locus_tag=AO053_02610;product=histidine triad nucleotide-binding protein;protein_id=TMQ39812.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	gene	3585	6410	.	-	.	ID=gene-AO053_02615;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AO053_02615
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	3585	6410	.	-	0	ID=cds-TMQ39813.1;Parent=gene-AO053_02615;Dbxref=NCBI_GP:TMQ39813.1;Name=TMQ39813.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693310.1;locus_tag=AO053_02615;product=isoleucine--tRNA ligase;protein_id=TMQ39813.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	gene	6439	7365	.	-	.	ID=gene-AO053_02620;Name=AO053_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02620
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	6439	7365	.	-	0	ID=cds-TMQ39814.1;Parent=gene-AO053_02620;Dbxref=NCBI_GP:TMQ39814.1;Name=TMQ39814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527269.1;locus_tag=AO053_02620;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=TMQ39814.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	gene	7412	8986	.	-	.	ID=gene-AO053_02625;Name=AO053_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02625
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	7412	8986	.	-	0	ID=cds-TMQ39815.1;Parent=gene-AO053_02625;Dbxref=NCBI_GP:TMQ39815.1;Name=TMQ39815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526146.1;locus_tag=AO053_02625;product=multidrug transporter MurJ;protein_id=TMQ39815.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	gene	9253	9516	.	+	.	ID=gene-AO053_02630;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AO053_02630
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	9253	9516	.	+	0	ID=cds-TMQ39816.1;Parent=gene-AO053_02630;Dbxref=NCBI_GP:TMQ39816.1;Name=TMQ39816.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652704.1;locus_tag=AO053_02630;product=30S ribosomal protein S20;protein_id=TMQ39816.1;transl_table=11
GCA_005888185.1|LNKP01000020.1	Genbank	pseudogene	9589	9733	.	-	.	ID=gene-AO053_02635;Name=AO053_02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02635;pseudo=true
GCA_005888185.1|LNKP01000020.1	Protein Homology	CDS	9589	9733	.	-	1	ID=cds-AO053_02635;Parent=gene-AO053_02635;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701969.1;locus_tag=AO053_02635;pseudo=true;transl_table=11
##sequence-region LNKP01000021.1 1 2977
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000021.1	Genbank	region	1	2977	.	+	.	ID=LNKP01000021.1:1..2977;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000021.1	Genbank	gene	1	422	.	-	.	ID=gene-AO053_02640;Name=AO053_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02640;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000021.1	Protein Homology	CDS	1	422	.	-	0	ID=cds-TMQ39796.1;Parent=gene-AO053_02640;Dbxref=NCBI_GP:TMQ39796.1;Name=TMQ39796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701969.1;locus_tag=AO053_02640;partial=true;product=hypothetical protein;protein_id=TMQ39796.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000021.1	Genbank	gene	412	552	.	+	.	ID=gene-AO053_02645;Name=AO053_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02645
GCA_005888185.1|LNKP01000021.1	Protein Homology	CDS	412	552	.	+	0	ID=cds-TMQ39800.1;Parent=gene-AO053_02645;Dbxref=NCBI_GP:TMQ39800.1;Name=TMQ39800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44086.1;locus_tag=AO053_02645;product=hypothetical protein;protein_id=TMQ39800.1;transl_table=11
GCA_005888185.1|LNKP01000021.1	Genbank	gene	568	1425	.	+	.	ID=gene-AO053_02650;Name=AO053_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02650
GCA_005888185.1|LNKP01000021.1	Protein Homology	CDS	568	1425	.	+	0	ID=cds-TMQ39797.1;Parent=gene-AO053_02650;Dbxref=NCBI_GP:TMQ39797.1;Name=TMQ39797.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44960.1;locus_tag=AO053_02650;product=2-ketocyclohexanecarboxyl-CoA hydrolase;protein_id=TMQ39797.1;transl_table=11
GCA_005888185.1|LNKP01000021.1	Genbank	gene	1494	2483	.	+	.	ID=gene-AO053_02655;Name=AO053_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02655
GCA_005888185.1|LNKP01000021.1	Protein Homology	CDS	1494	2483	.	+	0	ID=cds-TMQ39798.1;Parent=gene-AO053_02655;Dbxref=NCBI_GP:TMQ39798.1;Name=TMQ39798.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550990.1;locus_tag=AO053_02655;product=o-succinylbenzoate synthase;protein_id=TMQ39798.1;transl_table=11
GCA_005888185.1|LNKP01000021.1	Genbank	gene	2540	2977	.	+	.	ID=gene-AO053_02660;Name=AO053_02660;end_range=2977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02660;partial=true
GCA_005888185.1|LNKP01000021.1	Protein Homology	CDS	2540	2977	.	+	0	ID=cds-TMQ39799.1;Parent=gene-AO053_02660;Dbxref=NCBI_GP:TMQ39799.1;Name=TMQ39799.1;end_range=2977,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664194.1;locus_tag=AO053_02660;partial=true;product=3-dehydroquinate dehydratase;protein_id=TMQ39799.1;transl_table=11
##sequence-region LNKP01000022.1 1 14427
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000022.1	Genbank	region	1	14427	.	+	.	ID=LNKP01000022.1:1..14427;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000022.1	Genbank	gene	164	631	.	+	.	ID=gene-AO053_02665;Name=AO053_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02665
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	164	631	.	+	0	ID=cds-TMQ39752.1;Parent=gene-AO053_02665;Dbxref=NCBI_GP:TMQ39752.1;Name=TMQ39752.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626697.1;locus_tag=AO053_02665;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=TMQ39752.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	808	2154	.	+	.	ID=gene-AO053_02670;Name=AO053_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02670
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	808	2154	.	+	0	ID=cds-TMQ39753.1;Parent=gene-AO053_02670;Dbxref=NCBI_GP:TMQ39753.1;Name=TMQ39753.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43873.1;locus_tag=AO053_02670;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=TMQ39753.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	2359	2616	.	+	.	ID=gene-AO053_02675;Name=AO053_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02675
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	2359	2616	.	+	0	ID=cds-TMQ39754.1;Parent=gene-AO053_02675;Dbxref=NCBI_GP:TMQ39754.1;Name=TMQ39754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630971.1;locus_tag=AO053_02675;product=hypothetical protein;protein_id=TMQ39754.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	2613	4067	.	+	.	ID=gene-AO053_02680;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=AO053_02680
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	2613	4067	.	+	0	ID=cds-TMQ39755.1;Parent=gene-AO053_02680;Dbxref=NCBI_GP:TMQ39755.1;Name=TMQ39755.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44963.1;locus_tag=AO053_02680;product=sodium/pantothenate symporter;protein_id=TMQ39755.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	4187	5059	.	+	.	ID=gene-AO053_02685;Name=AO053_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02685
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	4187	5059	.	+	0	ID=cds-TMQ39756.1;Parent=gene-AO053_02685;Dbxref=NCBI_GP:TMQ39756.1;Name=TMQ39756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995622.1;locus_tag=AO053_02685;product=transporter;protein_id=TMQ39756.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	5094	5978	.	+	.	ID=gene-AO053_02690;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=AO053_02690
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	5094	5978	.	+	0	ID=cds-TMQ39757.1;Parent=gene-AO053_02690;Dbxref=NCBI_GP:TMQ39757.1;Name=TMQ39757.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526139.1;locus_tag=AO053_02690;product=ribosomal protein L11 methyltransferase;protein_id=TMQ39757.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	6299	7081	.	+	.	ID=gene-AO053_02695;Name=AO053_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02695
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	6299	7081	.	+	0	ID=cds-TMQ39765.1;Parent=gene-AO053_02695;Dbxref=NCBI_GP:TMQ39765.1;Name=TMQ39765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527265.1;locus_tag=AO053_02695;product=hypothetical protein;protein_id=TMQ39765.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	7229	8209	.	+	.	ID=gene-AO053_02700;Name=AO053_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02700
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	7229	8209	.	+	0	ID=cds-TMQ39758.1;Parent=gene-AO053_02700;Dbxref=NCBI_GP:TMQ39758.1;Name=TMQ39758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272326.1;locus_tag=AO053_02700;product=tRNA-dihydrouridine synthase B;protein_id=TMQ39758.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	8203	8502	.	+	.	ID=gene-AO053_02705;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=AO053_02705
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	8203	8502	.	+	0	ID=cds-TMQ39759.1;Parent=gene-AO053_02705;Dbxref=NCBI_GP:TMQ39759.1;Name=TMQ39759.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65V72.1;locus_tag=AO053_02705;product=Fis family transcriptional regulator;protein_id=TMQ39759.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	8597	9082	.	-	.	ID=gene-AO053_02710;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AO053_02710
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	8597	9082	.	-	0	ID=cds-TMQ39760.1;Parent=gene-AO053_02710;Dbxref=NCBI_GP:TMQ39760.1;Name=TMQ39760.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIC0.1;locus_tag=AO053_02710;product=SsrA-binding protein;protein_id=TMQ39760.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	9321	10286	.	-	.	ID=gene-AO053_02715;Name=AO053_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02715
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	9321	10286	.	-	0	ID=cds-TMQ39761.1;Parent=gene-AO053_02715;Dbxref=NCBI_GP:TMQ39761.1;Name=TMQ39761.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499809.1;locus_tag=AO053_02715;product=ATP-dependent 6-phosphofructokinase;protein_id=TMQ39761.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	10382	10963	.	-	.	ID=gene-AO053_02720;Name=AO053_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02720
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	10382	10963	.	-	0	ID=cds-TMQ39762.1;Parent=gene-AO053_02720;Dbxref=NCBI_GP:TMQ39762.1;Name=TMQ39762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651586.1;locus_tag=AO053_02720;product=hypothetical protein;protein_id=TMQ39762.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	10956	11732	.	-	.	ID=gene-AO053_02725;Name=AO053_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02725
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	10956	11732	.	-	0	ID=cds-TMQ39763.1;Parent=gene-AO053_02725;Dbxref=NCBI_GP:TMQ39763.1;Name=TMQ39763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIC3.1;locus_tag=AO053_02725;product=hypothetical protein;protein_id=TMQ39763.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	gene	11785	12906	.	-	.	ID=gene-AO053_02730;Name=AO053_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02730
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	11785	12906	.	-	0	ID=cds-TMQ39764.1;Parent=gene-AO053_02730;Dbxref=NCBI_GP:TMQ39764.1;Name=TMQ39764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272330.1;locus_tag=AO053_02730;product=DNA processing protein DprA;protein_id=TMQ39764.1;transl_table=11
GCA_005888185.1|LNKP01000022.1	Genbank	pseudogene	13463	14427	.	+	.	ID=gene-AO053_02735;Name=AO053_02735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02735;pseudo=true
GCA_005888185.1|LNKP01000022.1	Protein Homology	CDS	13463	14427	.	+	0	ID=cds-AO053_02735;Parent=gene-AO053_02735;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655964.1;locus_tag=AO053_02735;pseudo=true;transl_table=11
##sequence-region LNKP01000023.1 1 33993
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000023.1	Genbank	region	1	33993	.	+	.	ID=LNKP01000023.1:1..33993;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000023.1	Genbank	pseudogene	1	582	.	+	.	ID=gene-AO053_02740;Name=AO053_02740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02740;pseudo=true
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	1	582	.	+	0	ID=cds-AO053_02740;Parent=gene-AO053_02740;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995633.1;locus_tag=AO053_02740;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	668	1744	.	+	.	ID=gene-AO053_02745;Name=AO053_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02745
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	668	1744	.	+	0	ID=cds-TMQ39709.1;Parent=gene-AO053_02745;Dbxref=NCBI_GP:TMQ39709.1;Name=TMQ39709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651593.1;locus_tag=AO053_02745;product=3-isopropylmalate dehydrogenase;protein_id=TMQ39709.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	1920	3329	.	+	.	ID=gene-AO053_02750;Name=AO053_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02750
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	1920	3329	.	+	0	ID=cds-TMQ39710.1;Parent=gene-AO053_02750;Dbxref=NCBI_GP:TMQ39710.1;Name=TMQ39710.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701986.1;locus_tag=AO053_02750;product=isopropylmalate isomerase;protein_id=TMQ39710.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	3340	3942	.	+	.	ID=gene-AO053_02755;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=AO053_02755
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	3340	3942	.	+	0	ID=cds-TMQ39711.1;Parent=gene-AO053_02755;Dbxref=NCBI_GP:TMQ39711.1;Name=TMQ39711.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355432.1;locus_tag=AO053_02755;product=isopropylmalate isomerase;protein_id=TMQ39711.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	4056	9350	.	-	.	ID=gene-AO053_02760;Name=AO053_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02760
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	4056	9350	.	-	0	ID=cds-TMQ39712.1;Parent=gene-AO053_02760;Dbxref=NCBI_GP:TMQ39712.1;Name=TMQ39712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526130.1;locus_tag=AO053_02760;product=peptidase;protein_id=TMQ39712.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	9592	10671	.	-	.	ID=gene-AO053_02765;Name=AO053_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02765
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	9592	10671	.	-	0	ID=cds-TMQ39713.1;Parent=gene-AO053_02765;Dbxref=NCBI_GP:TMQ39713.1;Name=TMQ39713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665998.1;locus_tag=AO053_02765;product=DNA replication protein RecF;protein_id=TMQ39713.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	10673	11773	.	-	.	ID=gene-AO053_02770;Name=AO053_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02770
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	10673	11773	.	-	0	ID=cds-TMQ39714.1;Parent=gene-AO053_02770;Dbxref=NCBI_GP:TMQ39714.1;Name=TMQ39714.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995638.1;locus_tag=AO053_02770;product=DNA polymerase III subunit beta;protein_id=TMQ39714.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	11786	13150	.	-	.	ID=gene-AO053_02775;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AO053_02775
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	11786	13150	.	-	0	ID=cds-TMQ39715.1;Parent=gene-AO053_02775;Dbxref=NCBI_GP:TMQ39715.1;Name=TMQ39715.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055337.1;locus_tag=AO053_02775;product=chromosomal replication initiation protein;protein_id=TMQ39715.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	13342	16071	.	-	.	ID=gene-AO053_02780;Name=AO053_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02780
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	13342	16071	.	-	0	ID=cds-TMQ39716.1;Parent=gene-AO053_02780;Dbxref=NCBI_GP:TMQ39716.1;Name=TMQ39716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526127.1;locus_tag=AO053_02780;product=ligand-gated channel;protein_id=TMQ39716.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	16085	18079	.	-	.	ID=gene-AO053_02785;Name=AO053_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02785
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	16085	18079	.	-	0	ID=cds-TMQ39731.1;Parent=gene-AO053_02785;Dbxref=NCBI_GP:TMQ39731.1;Name=TMQ39731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526126.1;locus_tag=AO053_02785;product=transferrin-binding protein 2;protein_id=TMQ39731.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	18176	19636	.	+	.	ID=gene-AO053_02790;Name=AO053_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02790
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	18176	19636	.	+	0	ID=cds-TMQ39717.1;Parent=gene-AO053_02790;Dbxref=NCBI_GP:TMQ39717.1;Name=TMQ39717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690839.1;locus_tag=AO053_02790;product=chromosomal replication initiation protein;protein_id=TMQ39717.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	19812	19946	.	+	.	ID=gene-AO053_02795;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AO053_02795
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	19812	19946	.	+	0	ID=cds-TMQ39718.1;Parent=gene-AO053_02795;Dbxref=NCBI_GP:TMQ39718.1;Name=TMQ39718.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;inference=EXISTENCE: similar to AA sequence:SwissProt:P66245.1;locus_tag=AO053_02795;product=50S ribosomal protein L34;protein_id=TMQ39718.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	19959	20318	.	+	.	ID=gene-AO053_02800;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AO053_02800
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	19959	20318	.	+	0	ID=cds-TMQ39732.1;Parent=gene-AO053_02800;Dbxref=NCBI_GP:TMQ39732.1;Name=TMQ39732.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995643.1;locus_tag=AO053_02800;product=ribonuclease P protein component;protein_id=TMQ39732.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	20282	20542	.	+	.	ID=gene-AO053_02805;Name=AO053_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02805
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	20282	20542	.	+	0	ID=cds-TMQ39719.1;Parent=gene-AO053_02805;Dbxref=NCBI_GP:TMQ39719.1;Name=TMQ39719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44972.1;locus_tag=AO053_02805;product=membrane protein insertion efficiency factor YidD;protein_id=TMQ39719.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	20542	22167	.	+	.	ID=gene-AO053_02810;Name=AO053_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02810
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	20542	22167	.	+	0	ID=cds-TMQ39720.1;Parent=gene-AO053_02810;Dbxref=NCBI_GP:TMQ39720.1;Name=TMQ39720.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665985.1;locus_tag=AO053_02810;product=insertase;protein_id=TMQ39720.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	22326	23684	.	+	.	ID=gene-AO053_02815;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=AO053_02815
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	22326	23684	.	+	0	ID=cds-TMQ39721.1;Parent=gene-AO053_02815;Dbxref=NCBI_GP:TMQ39721.1;Name=TMQ39721.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527255.1;locus_tag=AO053_02815;product=tRNA modification GTPase TrmE;protein_id=TMQ39721.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	23873	25741	.	+	.	ID=gene-AO053_02820;Name=AO053_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02820
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	23873	25741	.	+	0	ID=cds-TMQ39722.1;Parent=gene-AO053_02820;Dbxref=NCBI_GP:TMQ39722.1;Name=TMQ39722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686282.1;locus_tag=AO053_02820;product=peptidylprolyl isomerase;protein_id=TMQ39722.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	25829	27388	.	+	.	ID=gene-AO053_02825;Name=AO053_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02825
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	25829	27388	.	+	0	ID=cds-TMQ39723.1;Parent=gene-AO053_02825;Dbxref=NCBI_GP:TMQ39723.1;Name=TMQ39723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526121.1;locus_tag=AO053_02825;product=phosphoethanolamine transferase;protein_id=TMQ39723.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	27458	27973	.	+	.	ID=gene-AO053_02830;Name=AO053_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02830
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	27458	27973	.	+	0	ID=cds-TMQ39724.1;Parent=gene-AO053_02830;Dbxref=NCBI_GP:TMQ39724.1;Name=TMQ39724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630989.1;locus_tag=AO053_02830;product=lipoprotein signal peptidase;protein_id=TMQ39724.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	27970	28914	.	+	.	ID=gene-AO053_02835;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AO053_02835
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	27970	28914	.	+	0	ID=cds-TMQ39725.1;Parent=gene-AO053_02835;Dbxref=NCBI_GP:TMQ39725.1;Name=TMQ39725.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLQ5.1;locus_tag=AO053_02835;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=TMQ39725.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	29083	29430	.	+	.	ID=gene-AO053_02840;Name=AO053_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02840
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	29083	29430	.	+	0	ID=cds-TMQ39726.1;Parent=gene-AO053_02840;Dbxref=NCBI_GP:TMQ39726.1;Name=TMQ39726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669732.1;locus_tag=AO053_02840;product=competence protein ComE;protein_id=TMQ39726.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	29677	30675	.	+	.	ID=gene-AO053_02845;Name=AO053_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02845
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	29677	30675	.	+	0	ID=cds-TMQ39727.1;Parent=gene-AO053_02845;Dbxref=NCBI_GP:TMQ39727.1;Name=TMQ39727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995652.1;locus_tag=AO053_02845;product=thiamine ABC transporter substrate-binding protein;protein_id=TMQ39727.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	30680	32296	.	+	.	ID=gene-AO053_02850;Name=AO053_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02850
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	30680	32296	.	+	0	ID=cds-TMQ39728.1;Parent=gene-AO053_02850;Dbxref=NCBI_GP:TMQ39728.1;Name=TMQ39728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054528.1;locus_tag=AO053_02850;product=thiamine ABC transporter permease;protein_id=TMQ39728.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	32280	32927	.	+	.	ID=gene-AO053_02855;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=AO053_02855
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	32280	32927	.	+	0	ID=cds-TMQ39729.1;Parent=gene-AO053_02855;Dbxref=NCBI_GP:TMQ39729.1;Name=TMQ39729.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690819.1;locus_tag=AO053_02855;product=thiamine ABC transporter ATP-binding protein;protein_id=TMQ39729.1;transl_table=11
GCA_005888185.1|LNKP01000023.1	Genbank	gene	33040	33993	.	+	.	ID=gene-AO053_02860;Name=AO053_02860;end_range=33993,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02860;partial=true
GCA_005888185.1|LNKP01000023.1	Protein Homology	CDS	33040	33993	.	+	0	ID=cds-TMQ39730.1;Parent=gene-AO053_02860;Dbxref=NCBI_GP:TMQ39730.1;Name=TMQ39730.1;end_range=33993,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526120.1;locus_tag=AO053_02860;partial=true;product=biotin synthase;protein_id=TMQ39730.1;transl_table=11
##sequence-region LNKP01000024.1 1 27365
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000024.1	Genbank	region	1	27365	.	+	.	ID=LNKP01000024.1:1..27365;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000024.1	Genbank	gene	256	2253	.	-	.	ID=gene-AO053_02865;Name=AO053_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02865
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	256	2253	.	-	0	ID=cds-TMQ39665.1;Parent=gene-AO053_02865;Dbxref=NCBI_GP:TMQ39665.1;Name=TMQ39665.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639188.1;locus_tag=AO053_02865;product=transketolase;protein_id=TMQ39665.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	2635	3579	.	+	.	ID=gene-AO053_02870;Name=AO053_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02870
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	2635	3579	.	+	0	ID=cds-TMQ39666.1;Parent=gene-AO053_02870;Dbxref=NCBI_GP:TMQ39666.1;Name=TMQ39666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500172.1;locus_tag=AO053_02870;product=phosphoserine phosphatase;protein_id=TMQ39666.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	3597	4088	.	+	.	ID=gene-AO053_02875;Name=AO053_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02875
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	3597	4088	.	+	0	ID=cds-TMQ39667.1;Parent=gene-AO053_02875;Dbxref=NCBI_GP:TMQ39667.1;Name=TMQ39667.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651339.1;locus_tag=AO053_02875;product=nucleotide-binding protein;protein_id=TMQ39667.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	4384	5331	.	+	.	ID=gene-AO053_02880;Name=AO053_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02880
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	4384	5331	.	+	0	ID=cds-TMQ39668.1;Parent=gene-AO053_02880;Dbxref=NCBI_GP:TMQ39668.1;Name=TMQ39668.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647825.1;locus_tag=AO053_02880;product=magnesium transporter CorA;protein_id=TMQ39668.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	5331	5876	.	+	.	ID=gene-AO053_02885;Name=AO053_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02885
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	5331	5876	.	+	0	ID=cds-TMQ39669.1;Parent=gene-AO053_02885;Dbxref=NCBI_GP:TMQ39669.1;Name=TMQ39669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702029.1;locus_tag=AO053_02885;product=hypothetical protein;protein_id=TMQ39669.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	6057	6893	.	-	.	ID=gene-AO053_02890;Name=AO053_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02890
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	6057	6893	.	-	0	ID=cds-TMQ39670.1;Parent=gene-AO053_02890;Dbxref=NCBI_GP:TMQ39670.1;Name=TMQ39670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686298.1;locus_tag=AO053_02890;product=class II glutamine amidotransferase;protein_id=TMQ39670.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	7319	8521	.	+	.	ID=gene-AO053_02895;Name=AO053_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02895
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	7319	8521	.	+	0	ID=cds-TMQ39671.1;Parent=gene-AO053_02895;Dbxref=NCBI_GP:TMQ39671.1;Name=TMQ39671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647817.1;locus_tag=AO053_02895;product=hypothetical protein;protein_id=TMQ39671.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Protein Homology	pseudogene	9167	11160	.	-	.	ID=gene-AO053_02900;Name=AO053_02900;Note=disrupted;description=cytochrome C nitrite reductase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02900;pseudo=true
GCA_005888185.1|LNKP01000024.1	Genbank	pseudogene	11171	11641	.	-	.	ID=gene-AO053_02905;Name=AO053_02905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02905;pseudo=true
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	11171	11641	.	-	0	ID=cds-AO053_02905;Parent=gene-AO053_02905;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656000.1;locus_tag=AO053_02905;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000024.1	Protein Homology	pseudogene	11997	12559	.	-	.	ID=gene-AO053_02910;Name=AO053_02910;Note=disrupted;description=methionine synthase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02910;pseudo=true
GCA_005888185.1|LNKP01000024.1	Genbank	gene	12556	12804	.	-	.	ID=gene-AO053_02915;Name=AO053_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02915
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	12556	12804	.	-	0	ID=cds-TMQ39672.1;Parent=gene-AO053_02915;Dbxref=NCBI_GP:TMQ39672.1;Name=TMQ39672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659313.1;locus_tag=AO053_02915;product=methionine synthase;protein_id=TMQ39672.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	13082	13582	.	-	.	ID=gene-AO053_02920;Name=AO053_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02920
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	13082	13582	.	-	0	ID=cds-TMQ39673.1;Parent=gene-AO053_02920;Dbxref=NCBI_GP:TMQ39673.1;Name=TMQ39673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656004.1;locus_tag=AO053_02920;product=ferredoxin-type protein NapF;protein_id=TMQ39673.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	13582	14193	.	-	.	ID=gene-AO053_02925;Name=AO053_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02925
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	13582	14193	.	-	0	ID=cds-TMQ39674.1;Parent=gene-AO053_02925;Dbxref=NCBI_GP:TMQ39674.1;Name=TMQ39674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647795.1;locus_tag=AO053_02925;product=Tat proofreading chaperone DmsD;protein_id=TMQ39674.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	14305	15144	.	-	.	ID=gene-AO053_02930;Name=AO053_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02930
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	14305	15144	.	-	0	ID=cds-TMQ39675.1;Parent=gene-AO053_02930;Dbxref=NCBI_GP:TMQ39675.1;Name=TMQ39675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45002.1;locus_tag=AO053_02930;product=dimethyl sulfoxide reductase;protein_id=TMQ39675.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	15146	15763	.	-	.	ID=gene-AO053_02935;Name=AO053_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02935
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	15146	15763	.	-	0	ID=cds-TMQ39676.1;Parent=gene-AO053_02935;Dbxref=NCBI_GP:TMQ39676.1;Name=TMQ39676.1;Note=oxidoreductase%2C Fe-S subunit%3B terminal electron transfer protein for the reduction of DMSO;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45003.1;locus_tag=AO053_02935;product=dimethyl sulfoxide reductase;protein_id=TMQ39676.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	15774	18194	.	-	.	ID=gene-AO053_02940;Name=AO053_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02940
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	15774	18194	.	-	0	ID=cds-TMQ39677.1;Parent=gene-AO053_02940;Dbxref=NCBI_GP:TMQ39677.1;Name=TMQ39677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651687.1;locus_tag=AO053_02940;product=dimethyl sulfoxide reductase;protein_id=TMQ39677.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	18451	19560	.	+	.	ID=gene-AO053_02945;Name=AO053_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02945
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	18451	19560	.	+	0	ID=cds-TMQ39678.1;Parent=gene-AO053_02945;Dbxref=NCBI_GP:TMQ39678.1;Name=TMQ39678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647785.1;locus_tag=AO053_02945;product=hypothetical protein;protein_id=TMQ39678.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Protein Homology	pseudogene	19535	19898	.	+	.	ID=gene-AO053_02950;Name=AO053_02950;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02950;pseudo=true
GCA_005888185.1|LNKP01000024.1	Genbank	gene	19907	20185	.	+	.	ID=gene-AO053_02955;Name=AO053_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02955
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	19907	20185	.	+	0	ID=cds-TMQ39679.1;Parent=gene-AO053_02955;Dbxref=NCBI_GP:TMQ39679.1;Name=TMQ39679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996602.1;locus_tag=AO053_02955;product=hypothetical protein;protein_id=TMQ39679.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	20310	22154	.	-	.	ID=gene-AO053_02960;Name=AO053_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02960
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	20310	22154	.	-	0	ID=cds-TMQ39680.1;Parent=gene-AO053_02960;Dbxref=NCBI_GP:TMQ39680.1;Name=TMQ39680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996601.1;locus_tag=AO053_02960;product=multidrug ABC transporter ATP-binding protein;protein_id=TMQ39680.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	22233	23129	.	-	.	ID=gene-AO053_02965;Name=AO053_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02965
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	22233	23129	.	-	0	ID=cds-TMQ39681.1;Parent=gene-AO053_02965;Dbxref=NCBI_GP:TMQ39681.1;Name=TMQ39681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45008.1;locus_tag=AO053_02965;product=AraC family transcriptional regulator;protein_id=TMQ39681.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	23241	23582	.	+	.	ID=gene-AO053_02970;Name=AO053_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02970
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	23241	23582	.	+	0	ID=cds-TMQ39682.1;Parent=gene-AO053_02970;Dbxref=NCBI_GP:TMQ39682.1;Name=TMQ39682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57498.1;locus_tag=AO053_02970;product=hypothetical protein;protein_id=TMQ39682.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	gene	23681	26455	.	-	.	ID=gene-AO053_02975;Name=AO053_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_02975
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	23681	26455	.	-	0	ID=cds-TMQ39683.1;Parent=gene-AO053_02975;Dbxref=NCBI_GP:TMQ39683.1;Name=TMQ39683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688339.1;locus_tag=AO053_02975;product=type III restriction endonuclease subunit R;protein_id=TMQ39683.1;transl_table=11
GCA_005888185.1|LNKP01000024.1	Genbank	pseudogene	26445	27128	.	-	.	ID=gene-AO053_02980;Name=AO053_02980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02980;pseudo=true
GCA_005888185.1|LNKP01000024.1	Protein Homology	CDS	26445	27128	.	-	0	ID=cds-AO053_02980;Parent=gene-AO053_02980;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996595.1;locus_tag=AO053_02980;pseudo=true;transl_table=11
##sequence-region LNKP01000025.1 1 21509
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000025.1	Genbank	region	1	21509	.	+	.	ID=LNKP01000025.1:1..21509;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000025.1	Genbank	pseudogene	736	1212	.	-	.	ID=gene-AO053_02985;Name=AO053_02985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_02985;pseudo=true
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	736	1212	.	-	0	ID=cds-AO053_02985;Parent=gene-AO053_02985;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241700.1;locus_tag=AO053_02985;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	1428	2021	.	-	.	ID=gene-AO053_02990;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=AO053_02990
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	1428	2021	.	-	0	ID=cds-TMQ39579.1;Parent=gene-AO053_02990;Dbxref=NCBI_GP:TMQ39579.1;Name=TMQ39579.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665922.1;locus_tag=AO053_02990;product=ribonuclease HII;protein_id=TMQ39579.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	2014	3186	.	-	.	ID=gene-AO053_02995;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AO053_02995
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	2014	3186	.	-	0	ID=cds-TMQ39580.1;Parent=gene-AO053_02995;Dbxref=NCBI_GP:TMQ39580.1;Name=TMQ39580.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526110.1;locus_tag=AO053_02995;product=lipid-A-disaccharide synthase;protein_id=TMQ39580.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	3253	4041	.	-	.	ID=gene-AO053_03000;Name=AO053_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03000
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	3253	4041	.	-	0	ID=cds-TMQ39581.1;Parent=gene-AO053_03000;Dbxref=NCBI_GP:TMQ39581.1;Name=TMQ39581.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669829.1;locus_tag=AO053_03000;product=UDP-N-acetylglucosamine O-acyltransferase;protein_id=TMQ39581.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	4055	4459	.	-	.	ID=gene-AO053_03005;Name=AO053_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03005
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	4055	4459	.	-	0	ID=cds-TMQ39595.1;Parent=gene-AO053_03005;Dbxref=NCBI_GP:TMQ39595.1;Name=TMQ39595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005685437.1;locus_tag=AO053_03005;product=beta-hydroxyacyl-ACP dehydratase;protein_id=TMQ39595.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	4587	6146	.	-	.	ID=gene-AO053_03010;Name=AO053_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03010
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	4587	6146	.	-	0	ID=cds-TMQ39582.1;Parent=gene-AO053_03010;Dbxref=NCBI_GP:TMQ39582.1;Name=TMQ39582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702043.1;locus_tag=AO053_03010;product=hypothetical protein;protein_id=TMQ39582.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	6277	6990	.	+	.	ID=gene-AO053_03015;Name=AO053_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03015
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	6277	6990	.	+	0	ID=cds-TMQ39583.1;Parent=gene-AO053_03015;Dbxref=NCBI_GP:TMQ39583.1;Name=TMQ39583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690774.1;locus_tag=AO053_03015;product=uridylate kinase;protein_id=TMQ39583.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	7229	8194	.	-	.	ID=gene-AO053_03020;Name=AO053_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03020
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	7229	8194	.	-	0	ID=cds-TMQ39584.1;Parent=gene-AO053_03020;Dbxref=NCBI_GP:TMQ39584.1;Name=TMQ39584.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272369.1;locus_tag=AO053_03020;product=nitrite reductase;protein_id=TMQ39584.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	8191	8868	.	-	.	ID=gene-AO053_03025;Name=AO053_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03025
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	8191	8868	.	-	0	ID=cds-TMQ39585.1;Parent=gene-AO053_03025;Dbxref=NCBI_GP:TMQ39585.1;Name=TMQ39585.1;Note=4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996588.1;locus_tag=AO053_03025;product=nitrite reductase;protein_id=TMQ39585.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	8865	9515	.	-	.	ID=gene-AO053_03030;Name=AO053_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03030
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	8865	9515	.	-	0	ID=cds-TMQ39586.1;Parent=gene-AO053_03030;Dbxref=NCBI_GP:TMQ39586.1;Name=TMQ39586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527847.1;locus_tag=AO053_03030;product=cysteine dioxygenase;protein_id=TMQ39586.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	9591	11117	.	-	.	ID=gene-AO053_03035;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=AO053_03035
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	9591	11117	.	-	0	ID=cds-TMQ39587.1;Parent=gene-AO053_03035;Dbxref=NCBI_GP:TMQ39587.1;Name=TMQ39587.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659362.1;locus_tag=AO053_03035;product=cytochrome C nitrite reductase;protein_id=TMQ39587.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	11369	15280	.	-	.	ID=gene-AO053_03040;Name=AO053_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03040
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	11369	15280	.	-	0	ID=cds-TMQ39588.1;Parent=gene-AO053_03040;Dbxref=NCBI_GP:TMQ39588.1;Name=TMQ39588.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693395.1;locus_tag=AO053_03040;product=ATP-dependent RNA helicase HrpA;protein_id=TMQ39588.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	15277	15651	.	-	.	ID=gene-AO053_03045;Name=AO053_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03045
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	15277	15651	.	-	0	ID=cds-TMQ39589.1;Parent=gene-AO053_03045;Dbxref=NCBI_GP:TMQ39589.1;Name=TMQ39589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688327.1;locus_tag=AO053_03045;product=hypothetical protein;protein_id=TMQ39589.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	15652	16104	.	-	.	ID=gene-AO053_03050;Name=AO053_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03050
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	15652	16104	.	-	0	ID=cds-TMQ39590.1;Parent=gene-AO053_03050;Dbxref=NCBI_GP:TMQ39590.1;Name=TMQ39590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996583.1;locus_tag=AO053_03050;product=hypothetical protein;protein_id=TMQ39590.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	16375	17511	.	-	.	ID=gene-AO053_03055;Name=AO053_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03055
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	16375	17511	.	-	0	ID=cds-TMQ39591.1;Parent=gene-AO053_03055;Dbxref=NCBI_GP:TMQ39591.1;Name=TMQ39591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272373.1;locus_tag=AO053_03055;product=cytochrome d ubiquinol oxidase subunit 2;protein_id=TMQ39591.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	17526	19091	.	-	.	ID=gene-AO053_03060;Name=AO053_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03060
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	17526	19091	.	-	0	ID=cds-TMQ39592.1;Parent=gene-AO053_03060;Dbxref=NCBI_GP:TMQ39592.1;Name=TMQ39592.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272374.1;locus_tag=AO053_03060;product=cytochrome d terminal oxidase subunit 1;protein_id=TMQ39592.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	19536	19715	.	-	.	ID=gene-AO053_03065;Name=AO053_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03065
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	19536	19715	.	-	0	ID=cds-TMQ39593.1;Parent=gene-AO053_03065;Dbxref=NCBI_GP:TMQ39593.1;Name=TMQ39593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688326.1;locus_tag=AO053_03065;product=hypothetical protein;protein_id=TMQ39593.1;transl_table=11
GCA_005888185.1|LNKP01000025.1	Genbank	gene	19744	21381	.	+	.	ID=gene-AO053_03070;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AO053_03070
GCA_005888185.1|LNKP01000025.1	Protein Homology	CDS	19744	21381	.	+	0	ID=cds-TMQ39594.1;Parent=gene-AO053_03070;Dbxref=NCBI_GP:TMQ39594.1;Name=TMQ39594.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLL2.1;locus_tag=AO053_03070;product=CTP synthetase;protein_id=TMQ39594.1;transl_table=11
##sequence-region LNKP01000026.1 1 14272
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000026.1	Genbank	region	1	14272	.	+	.	ID=LNKP01000026.1:1..14272;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000026.1	Genbank	gene	16	696	.	-	.	ID=gene-AO053_03075;Name=AO053_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03075
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	16	696	.	-	0	ID=cds-TMQ39551.1;Parent=gene-AO053_03075;Dbxref=NCBI_GP:TMQ39551.1;Name=TMQ39551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690756.1;locus_tag=AO053_03075;product=nicotinamide riboside transporter pnuC;protein_id=TMQ39551.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	878	1645	.	-	.	ID=gene-AO053_03080;Name=AO053_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03080
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	878	1645	.	-	0	ID=cds-TMQ39552.1;Parent=gene-AO053_03080;Dbxref=NCBI_GP:TMQ39552.1;Name=TMQ39552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272376.1;locus_tag=AO053_03080;product=polar amino acid ABC transporter ATP-binding protein;protein_id=TMQ39552.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	1655	2371	.	-	.	ID=gene-AO053_03085;Name=AO053_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03085
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	1655	2371	.	-	0	ID=cds-TMQ39553.1;Parent=gene-AO053_03085;Dbxref=NCBI_GP:TMQ39553.1;Name=TMQ39553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633396.1;locus_tag=AO053_03085;product=cysteine ABC transporter permease;protein_id=TMQ39553.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	2355	3128	.	-	.	ID=gene-AO053_03090;Name=AO053_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03090
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	2355	3128	.	-	0	ID=cds-TMQ39554.1;Parent=gene-AO053_03090;Dbxref=NCBI_GP:TMQ39554.1;Name=TMQ39554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636846.1;locus_tag=AO053_03090;product=amino acid ABC transporter substrate-binding protein;protein_id=TMQ39554.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	3429	4703	.	-	.	ID=gene-AO053_03095;Name=AO053_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03095
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	3429	4703	.	-	0	ID=cds-TMQ39555.1;Parent=gene-AO053_03095;Dbxref=NCBI_GP:TMQ39555.1;Name=TMQ39555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIK7.1;locus_tag=AO053_03095;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=TMQ39555.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	4714	4971	.	-	.	ID=gene-AO053_03100;Name=AO053_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03100
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	4714	4971	.	-	0	ID=cds-TMQ39556.1;Parent=gene-AO053_03100;Dbxref=NCBI_GP:TMQ39556.1;Name=TMQ39556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647705.1;locus_tag=AO053_03100;product=hypothetical protein;protein_id=TMQ39556.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	4992	5309	.	-	.	ID=gene-AO053_03105;Name=AO053_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03105
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	4992	5309	.	-	0	ID=cds-TMQ39557.1;Parent=gene-AO053_03105;Dbxref=NCBI_GP:TMQ39557.1;Name=TMQ39557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651726.1;locus_tag=AO053_03105;product=hypothetical protein;protein_id=TMQ39557.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	5320	5964	.	-	.	ID=gene-AO053_03110;Name=AO053_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03110
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	5320	5964	.	-	0	ID=cds-TMQ39558.1;Parent=gene-AO053_03110;Dbxref=NCBI_GP:TMQ39558.1;Name=TMQ39558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272379.1;locus_tag=AO053_03110;product=hypothetical protein;protein_id=TMQ39558.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	5997	6497	.	-	.	ID=gene-AO053_03115;Name=AO053_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03115
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	5997	6497	.	-	0	ID=cds-TMQ39559.1;Parent=gene-AO053_03115;Dbxref=NCBI_GP:TMQ39559.1;Name=TMQ39559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656074.1;locus_tag=AO053_03115;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=TMQ39559.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	6508	7293	.	-	.	ID=gene-AO053_03120;Name=AO053_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03120
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	6508	7293	.	-	0	ID=cds-TMQ39560.1;Parent=gene-AO053_03120;Dbxref=NCBI_GP:TMQ39560.1;Name=TMQ39560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651728.1;locus_tag=AO053_03120;product=ABC transporter permease;protein_id=TMQ39560.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	7290	8084	.	-	.	ID=gene-AO053_03125;Name=AO053_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03125
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	7290	8084	.	-	0	ID=cds-TMQ39561.1;Parent=gene-AO053_03125;Dbxref=NCBI_GP:TMQ39561.1;Name=TMQ39561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628331.1;locus_tag=AO053_03125;product=ABC transporter ATP-binding protein;protein_id=TMQ39561.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	8477	9124	.	-	.	ID=gene-AO053_03130;Name=AO053_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03130
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	8477	9124	.	-	0	ID=cds-TMQ39562.1;Parent=gene-AO053_03130;Dbxref=NCBI_GP:TMQ39562.1;Name=TMQ39562.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996568.1;locus_tag=AO053_03130;product=superoxide dismutase;protein_id=TMQ39562.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	9373	10011	.	+	.	ID=gene-AO053_03135;Name=AO053_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03135
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	9373	10011	.	+	0	ID=cds-TMQ39563.1;Parent=gene-AO053_03135;Dbxref=NCBI_GP:TMQ39563.1;Name=TMQ39563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665896.1;locus_tag=AO053_03135;product=heme ABC transporter ATP-binding protein;protein_id=TMQ39563.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	10016	10681	.	+	.	ID=gene-AO053_03140;Name=AO053_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03140
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	10016	10681	.	+	0	ID=cds-TMQ39564.1;Parent=gene-AO053_03140;Dbxref=NCBI_GP:TMQ39564.1;Name=TMQ39564.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659389.1;locus_tag=AO053_03140;product=heme ABC transporter permease;protein_id=TMQ39564.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	10742	11473	.	+	.	ID=gene-AO053_03145;Name=AO053_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03145
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	10742	11473	.	+	0	ID=cds-TMQ39565.1;Parent=gene-AO053_03145;Dbxref=NCBI_GP:TMQ39565.1;Name=TMQ39565.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526091.1;locus_tag=AO053_03145;product=heme ABC transporter permease;protein_id=TMQ39565.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	11521	11721	.	+	.	ID=gene-AO053_03150;Name=AO053_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03150
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	11521	11721	.	+	0	ID=cds-TMQ39566.1;Parent=gene-AO053_03150;Dbxref=NCBI_GP:TMQ39566.1;Name=TMQ39566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651736.1;locus_tag=AO053_03150;product=hemagglutination activity protein;protein_id=TMQ39566.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	11718	12239	.	+	.	ID=gene-AO053_03155;Name=AO053_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03155
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	11718	12239	.	+	0	ID=cds-TMQ39567.1;Parent=gene-AO053_03155;Dbxref=NCBI_GP:TMQ39567.1;Name=TMQ39567.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647687.1;locus_tag=AO053_03155;product=cytochrome C biogenesis protein CcmE;protein_id=TMQ39567.1;transl_table=11
GCA_005888185.1|LNKP01000026.1	Genbank	gene	12236	14182	.	+	.	ID=gene-AO053_03160;Name=AO053_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03160
GCA_005888185.1|LNKP01000026.1	Protein Homology	CDS	12236	14182	.	+	0	ID=cds-TMQ39568.1;Parent=gene-AO053_03160;Dbxref=NCBI_GP:TMQ39568.1;Name=TMQ39568.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996562.1;locus_tag=AO053_03160;product=cytochrome C biogenesis protein CcmF;protein_id=TMQ39568.1;transl_table=11
##sequence-region LNKP01000027.1 1 5669
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000027.1	Genbank	region	1	5669	.	+	.	ID=LNKP01000027.1:1..5669;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000027.1	Genbank	gene	13	558	.	+	.	ID=gene-AO053_03165;Name=AO053_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03165
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	13	558	.	+	0	ID=cds-TMQ39531.1;Parent=gene-AO053_03165;Dbxref=NCBI_GP:TMQ39531.1;Name=TMQ39531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634310.1;locus_tag=AO053_03165;product=thiol:disulfide interchange protein;protein_id=TMQ39531.1;transl_table=11
GCA_005888185.1|LNKP01000027.1	Genbank	gene	558	1019	.	+	.	ID=gene-AO053_03170;Name=AO053_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03170
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	558	1019	.	+	0	ID=cds-TMQ39532.1;Parent=gene-AO053_03170;Dbxref=NCBI_GP:TMQ39532.1;Name=TMQ39532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702057.1;locus_tag=AO053_03170;product=cytochrome C biogenesis protein;protein_id=TMQ39532.1;transl_table=11
GCA_005888185.1|LNKP01000027.1	Genbank	gene	1020	1937	.	+	.	ID=gene-AO053_03175;Name=AO053_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03175
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	1020	1937	.	+	0	ID=cds-TMQ39533.1;Parent=gene-AO053_03175;Dbxref=NCBI_GP:TMQ39533.1;Name=TMQ39533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550933.1;locus_tag=AO053_03175;product=c-type cytochrome biogenesis protein CcmI;protein_id=TMQ39533.1;transl_table=11
GCA_005888185.1|LNKP01000027.1	Genbank	gene	2058	2558	.	+	.	ID=gene-AO053_03180;Name=AO053_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03180
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	2058	2558	.	+	0	ID=cds-TMQ39536.1;Parent=gene-AO053_03180;Dbxref=NCBI_GP:TMQ39536.1;Name=TMQ39536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526088.1;locus_tag=AO053_03180;product=hypothetical protein;protein_id=TMQ39536.1;transl_table=11
GCA_005888185.1|LNKP01000027.1	Genbank	gene	2569	2868	.	+	.	ID=gene-AO053_03185;Name=AO053_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03185
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	2569	2868	.	+	0	ID=cds-TMQ39534.1;Parent=gene-AO053_03185;Dbxref=NCBI_GP:TMQ39534.1;Name=TMQ39534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690731.1;locus_tag=AO053_03185;product=hypothetical protein;protein_id=TMQ39534.1;transl_table=11
GCA_005888185.1|LNKP01000027.1	Genbank	gene	2873	4885	.	-	.	ID=gene-AO053_03190;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AO053_03190
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	2873	4885	.	-	0	ID=cds-TMQ39535.1;Parent=gene-AO053_03190;Dbxref=NCBI_GP:TMQ39535.1;Name=TMQ39535.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702059.1;locus_tag=AO053_03190;product=aromatic ring-opening dioxygenase LigA;protein_id=TMQ39535.1;transl_table=11
GCA_005888185.1|LNKP01000027.1	Genbank	gene	4997	5669	.	-	.	ID=gene-AO053_03195;Name=AO053_03195;end_range=5669,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03195;partial=true
GCA_005888185.1|LNKP01000027.1	Protein Homology	CDS	4997	5669	.	-	1	ID=cds-TMQ39537.1;Parent=gene-AO053_03195;Dbxref=NCBI_GP:TMQ39537.1;Name=TMQ39537.1;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;end_range=5669,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651750.1;locus_tag=AO053_03195;partial=true;product=cell division protein ZipA;protein_id=TMQ39537.1;transl_table=11
##sequence-region LNKP01000028.1 1 19521
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000028.1	Genbank	region	1	19521	.	+	.	ID=LNKP01000028.1:1..19521;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000028.1	Genbank	pseudogene	1	312	.	-	.	ID=gene-AO053_03200;Name=AO053_03200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03200;pseudo=true
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	1	312	.	-	0	ID=cds-AO053_03200;Parent=gene-AO053_03200;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UD03.1;locus_tag=AO053_03200;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	465	1283	.	+	.	ID=gene-AO053_03205;Name=AO053_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03205
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	465	1283	.	+	0	ID=cds-TMQ39492.1;Parent=gene-AO053_03205;Dbxref=NCBI_GP:TMQ39492.1;Name=TMQ39492.1;Note=role in sulfur assimilation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLI8.1;locus_tag=AO053_03205;product=cysteine biosynthesis protein CysZ;protein_id=TMQ39492.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	1382	2332	.	+	.	ID=gene-AO053_03210;Name=AO053_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03210
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	1382	2332	.	+	0	ID=cds-TMQ39493.1;Parent=gene-AO053_03210;Dbxref=NCBI_GP:TMQ39493.1;Name=TMQ39493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45040.1;locus_tag=AO053_03210;product=cysteine synthase;protein_id=TMQ39493.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	2580	3803	.	+	.	ID=gene-AO053_03215;Name=AO053_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03215
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	2580	3803	.	+	0	ID=cds-TMQ39494.1;Parent=gene-AO053_03215;Dbxref=NCBI_GP:TMQ39494.1;Name=TMQ39494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647660.1;locus_tag=AO053_03215;product=MFS transporter;protein_id=TMQ39494.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	3912	4952	.	-	.	ID=gene-AO053_03220;Name=AO053_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03220
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	3912	4952	.	-	0	ID=cds-TMQ39495.1;Parent=gene-AO053_03220;Dbxref=NCBI_GP:TMQ39495.1;Name=TMQ39495.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690719.1;locus_tag=AO053_03220;product=ADP-heptose--LPS heptosyltransferase;protein_id=TMQ39495.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	5038	5964	.	-	.	ID=gene-AO053_03225;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=AO053_03225
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	5038	5964	.	-	0	ID=cds-TMQ39496.1;Parent=gene-AO053_03225;Dbxref=NCBI_GP:TMQ39496.1;Name=TMQ39496.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054491.1;locus_tag=AO053_03225;product=ADP-L-glycero-D-mannoheptose-6-epimerase;protein_id=TMQ39496.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	6017	6520	.	-	.	ID=gene-AO053_03230;Name=AO053_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03230
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	6017	6520	.	-	0	ID=cds-TMQ39497.1;Parent=gene-AO053_03230;Dbxref=NCBI_GP:TMQ39497.1;Name=TMQ39497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643157.1;locus_tag=AO053_03230;product=thioredoxin;protein_id=TMQ39497.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	6631	7302	.	+	.	ID=gene-AO053_03235;Name=AO053_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03235
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	6631	7302	.	+	0	ID=cds-TMQ39498.1;Parent=gene-AO053_03235;Dbxref=NCBI_GP:TMQ39498.1;Name=TMQ39498.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCY8.1;locus_tag=AO053_03235;product=2-deoxyribose-5-phosphate aldolase;protein_id=TMQ39498.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	7336	8865	.	-	.	ID=gene-AO053_03240;Name=AO053_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03240
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	7336	8865	.	-	0	ID=cds-TMQ39499.1;Parent=gene-AO053_03240;Dbxref=NCBI_GP:TMQ39499.1;Name=TMQ39499.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661812.1;locus_tag=AO053_03240;product=ATP-dependent protease;protein_id=TMQ39499.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	8980	9597	.	-	.	ID=gene-AO053_03245;Name=AO053_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03245
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	8980	9597	.	-	0	ID=cds-TMQ39500.1;Parent=gene-AO053_03245;Dbxref=NCBI_GP:TMQ39500.1;Name=TMQ39500.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLH6.1;locus_tag=AO053_03245;product=GTP-binding protein;protein_id=TMQ39500.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	9702	10568	.	+	.	ID=gene-AO053_03250;Name=AO053_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03250
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	9702	10568	.	+	0	ID=cds-TMQ39501.1;Parent=gene-AO053_03250;Dbxref=NCBI_GP:TMQ39501.1;Name=TMQ39501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667527.1;locus_tag=AO053_03250;product=hypothetical protein;protein_id=TMQ39501.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	10608	11606	.	-	.	ID=gene-AO053_03255;Name=AO053_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03255
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	10608	11606	.	-	0	ID=cds-TMQ39502.1;Parent=gene-AO053_03255;Dbxref=NCBI_GP:TMQ39502.1;Name=TMQ39502.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700062.1;locus_tag=AO053_03255;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ39502.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	11603	12574	.	-	.	ID=gene-AO053_03260;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=AO053_03260
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	11603	12574	.	-	0	ID=cds-TMQ39503.1;Parent=gene-AO053_03260;Dbxref=NCBI_GP:TMQ39503.1;Name=TMQ39503.1;gbkey=CDS;gene=oppD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526077.1;locus_tag=AO053_03260;product=oligopeptide transporter ATP-binding component;protein_id=TMQ39503.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	12584	13519	.	-	.	ID=gene-AO053_03265;Name=AO053_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03265
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	12584	13519	.	-	0	ID=cds-TMQ39504.1;Parent=gene-AO053_03265;Dbxref=NCBI_GP:TMQ39504.1;Name=TMQ39504.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272393.1;locus_tag=AO053_03265;product=peptide ABC transporter permease;protein_id=TMQ39504.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	13529	14449	.	-	.	ID=gene-AO053_03270;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=AO053_03270
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	13529	14449	.	-	0	ID=cds-TMQ39505.1;Parent=gene-AO053_03270;Dbxref=NCBI_GP:TMQ39505.1;Name=TMQ39505.1;gbkey=CDS;gene=oppB;inference=EXISTENCE: similar to AA sequence:SwissProt:P45054.1;locus_tag=AO053_03270;product=oligopeptide transporter permease;protein_id=TMQ39505.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	14530	16155	.	-	.	ID=gene-AO053_03275;Name=AO053_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03275
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	14530	16155	.	-	0	ID=cds-TMQ39506.1;Parent=gene-AO053_03275;Dbxref=NCBI_GP:TMQ39506.1;Name=TMQ39506.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054489.1;locus_tag=AO053_03275;product=peptide ABC transporter substrate-binding protein;protein_id=TMQ39506.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	16451	17404	.	+	.	ID=gene-AO053_03280;Name=AO053_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03280
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	16451	17404	.	+	0	ID=cds-TMQ39507.1;Parent=gene-AO053_03280;Dbxref=NCBI_GP:TMQ39507.1;Name=TMQ39507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCY0.1;locus_tag=AO053_03280;product=transaldolase;protein_id=TMQ39507.1;transl_table=11
GCA_005888185.1|LNKP01000028.1	Genbank	gene	18484	19521	.	+	.	ID=gene-AO053_03285;Name=AO053_03285;end_range=19521,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03285;partial=true
GCA_005888185.1|LNKP01000028.1	Protein Homology	CDS	18484	19521	.	+	0	ID=cds-TMQ39508.1;Parent=gene-AO053_03285;Dbxref=NCBI_GP:TMQ39508.1;Name=TMQ39508.1;end_range=19521,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667512.1;locus_tag=AO053_03285;partial=true;product=carbon starvation protein CstA;protein_id=TMQ39508.1;transl_table=11
##sequence-region LNKP01000029.1 1 25812
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000029.1	Genbank	region	1	25812	.	+	.	ID=LNKP01000029.1:1..25812;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000029.1	Genbank	pseudogene	1	548	.	+	.	ID=gene-AO053_03290;Name=AO053_03290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03290;pseudo=true
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	1	548	.	+	2	ID=cds-AO053_03290;Parent=gene-AO053_03290;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667512.1;locus_tag=AO053_03290;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	750	1205	.	+	.	ID=gene-AO053_03295;Name=AO053_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03295
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	750	1205	.	+	0	ID=cds-TMQ39421.1;Parent=gene-AO053_03295;Dbxref=NCBI_GP:TMQ39421.1;Name=TMQ39421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550931.1;locus_tag=AO053_03295;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=TMQ39421.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	1236	2201	.	+	.	ID=gene-AO053_03300;Name=AO053_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03300
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	1236	2201	.	+	0	ID=cds-TMQ39422.1;Parent=gene-AO053_03300;Dbxref=NCBI_GP:TMQ39422.1;Name=TMQ39422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657267.1;locus_tag=AO053_03300;product=ribosomal RNA small subunit methyltransferase H;protein_id=TMQ39422.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	2204	2527	.	+	.	ID=gene-AO053_03305;Name=AO053_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03305
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	2204	2527	.	+	0	ID=cds-TMQ39423.1;Parent=gene-AO053_03305;Dbxref=NCBI_GP:TMQ39423.1;Name=TMQ39423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661296.1;locus_tag=AO053_03305;product=cell division protein FtsL;protein_id=TMQ39423.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	2540	4372	.	+	.	ID=gene-AO053_03310;Name=AO053_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03310
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	2540	4372	.	+	0	ID=cds-TMQ39424.1;Parent=gene-AO053_03310;Dbxref=NCBI_GP:TMQ39424.1;Name=TMQ39424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527834.1;locus_tag=AO053_03310;product=peptidoglycan synthase;protein_id=TMQ39424.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	4382	5848	.	+	.	ID=gene-AO053_03315;Name=AO053_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03315
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	4382	5848	.	+	0	ID=cds-TMQ39425.1;Parent=gene-AO053_03315;Dbxref=NCBI_GP:TMQ39425.1;Name=TMQ39425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637657.1;locus_tag=AO053_03315;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=TMQ39425.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	5862	7235	.	+	.	ID=gene-AO053_03320;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=AO053_03320
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	5862	7235	.	+	0	ID=cds-TMQ39426.1;Parent=gene-AO053_03320;Dbxref=NCBI_GP:TMQ39426.1;Name=TMQ39426.1;gbkey=CDS;gene=murF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628286.1;locus_tag=AO053_03320;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=TMQ39426.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	7229	8311	.	+	.	ID=gene-AO053_03325;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AO053_03325
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	7229	8311	.	+	0	ID=cds-TMQ39427.1;Parent=gene-AO053_03325;Dbxref=NCBI_GP:TMQ39427.1;Name=TMQ39427.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLG1.1;locus_tag=AO053_03325;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=TMQ39427.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	8435	9748	.	+	.	ID=gene-AO053_03330;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AO053_03330
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	8435	9748	.	+	0	ID=cds-TMQ39428.1;Parent=gene-AO053_03330;Dbxref=NCBI_GP:TMQ39428.1;Name=TMQ39428.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526069.1;locus_tag=AO053_03330;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=TMQ39428.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	9770	10954	.	+	.	ID=gene-AO053_03335;Name=AO053_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03335
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	9770	10954	.	+	0	ID=cds-TMQ39429.1;Parent=gene-AO053_03335;Dbxref=NCBI_GP:TMQ39429.1;Name=TMQ39429.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527831.1;locus_tag=AO053_03335;product=cell division protein FtsW;protein_id=TMQ39429.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	10966	12021	.	+	.	ID=gene-AO053_03340;Name=AO053_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03340
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	10966	12021	.	+	0	ID=cds-TMQ39430.1;Parent=gene-AO053_03340;Dbxref=NCBI_GP:TMQ39430.1;Name=TMQ39430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996533.1;locus_tag=AO053_03340;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=TMQ39430.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	12159	13586	.	+	.	ID=gene-AO053_03345;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AO053_03345
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	12159	13586	.	+	0	ID=cds-TMQ39431.1;Parent=gene-AO053_03345;Dbxref=NCBI_GP:TMQ39431.1;Name=TMQ39431.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527829.1;locus_tag=AO053_03345;product=UDP-N-acetylmuramate--alanine ligase;protein_id=TMQ39431.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	13658	14578	.	+	.	ID=gene-AO053_03350;Name=AO053_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03350
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	13658	14578	.	+	0	ID=cds-TMQ39432.1;Parent=gene-AO053_03350;Dbxref=NCBI_GP:TMQ39432.1;Name=TMQ39432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44405.1;locus_tag=AO053_03350;product=D-alanine--D-alanine ligase;protein_id=TMQ39432.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	14578	15342	.	+	.	ID=gene-AO053_03355;Name=AO053_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03355
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	14578	15342	.	+	0	ID=cds-TMQ39433.1;Parent=gene-AO053_03355;Dbxref=NCBI_GP:TMQ39433.1;Name=TMQ39433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527827.1;locus_tag=AO053_03355;product=cell division protein FtsQ;protein_id=TMQ39433.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	15361	16638	.	+	.	ID=gene-AO053_03360;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AO053_03360
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	15361	16638	.	+	0	ID=cds-TMQ39434.1;Parent=gene-AO053_03360;Dbxref=NCBI_GP:TMQ39434.1;Name=TMQ39434.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651835.1;locus_tag=AO053_03360;product=cell division protein FtsA;protein_id=TMQ39434.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	16722	17987	.	+	.	ID=gene-AO053_03365;Name=AO053_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03365
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	16722	17987	.	+	0	ID=cds-TMQ39435.1;Parent=gene-AO053_03365;Dbxref=NCBI_GP:TMQ39435.1;Name=TMQ39435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526064.1;locus_tag=AO053_03365;product=cell division protein FtsZ;protein_id=TMQ39435.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	18026	18943	.	+	.	ID=gene-AO053_03370;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AO053_03370
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	18026	18943	.	+	0	ID=cds-TMQ39436.1;Parent=gene-AO053_03370;Dbxref=NCBI_GP:TMQ39436.1;Name=TMQ39436.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPA5.1;locus_tag=AO053_03370;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=TMQ39436.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	19070	20227	.	+	.	ID=gene-AO053_03375;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=AO053_03375
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	19070	20227	.	+	0	ID=cds-TMQ39437.1;Parent=gene-AO053_03375;Dbxref=NCBI_GP:TMQ39437.1;Name=TMQ39437.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550927.1;locus_tag=AO053_03375;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=TMQ39437.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	20272	21129	.	-	.	ID=gene-AO053_03380;Name=AO053_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03380
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	20272	21129	.	-	0	ID=cds-TMQ39438.1;Parent=gene-AO053_03380;Dbxref=NCBI_GP:TMQ39438.1;Name=TMQ39438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527823.1;locus_tag=AO053_03380;product=glmZ(sRNA)-inactivating NTPase;protein_id=TMQ39438.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	21147	21641	.	-	.	ID=gene-AO053_03385;Name=AO053_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03385
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	21147	21641	.	-	0	ID=cds-TMQ39439.1;Parent=gene-AO053_03385;Dbxref=NCBI_GP:TMQ39439.1;Name=TMQ39439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657238.1;locus_tag=AO053_03385;product=phosphotransferase;protein_id=TMQ39439.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	21644	22369	.	-	.	ID=gene-AO053_03390;Name=AO053_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03390
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	21644	22369	.	-	0	ID=cds-TMQ39440.1;Parent=gene-AO053_03390;Dbxref=NCBI_GP:TMQ39440.1;Name=TMQ39440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45073.1;locus_tag=AO053_03390;product=LPS export ABC transporter ATP-binding protein;protein_id=TMQ39440.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	22373	22891	.	-	.	ID=gene-AO053_03395;Name=AO053_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03395
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	22373	22891	.	-	0	ID=cds-TMQ39441.1;Parent=gene-AO053_03395;Dbxref=NCBI_GP:TMQ39441.1;Name=TMQ39441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45074.1;locus_tag=AO053_03395;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=TMQ39441.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	22872	23480	.	-	.	ID=gene-AO053_03400;Name=AO053_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03400
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	22872	23480	.	-	0	ID=cds-TMQ39442.1;Parent=gene-AO053_03400;Dbxref=NCBI_GP:TMQ39442.1;Name=TMQ39442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630377.1;locus_tag=AO053_03400;product=LPS export ABC transporter periplasmic protein LptC;protein_id=TMQ39442.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	23531	24067	.	-	.	ID=gene-AO053_03405;Name=AO053_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03405
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	23531	24067	.	-	0	ID=cds-TMQ39443.1;Parent=gene-AO053_03405;Dbxref=NCBI_GP:TMQ39443.1;Name=TMQ39443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702084.1;locus_tag=AO053_03405;product=hypothetical protein;protein_id=TMQ39443.1;transl_table=11
GCA_005888185.1|LNKP01000029.1	Genbank	gene	24156	25511	.	+	.	ID=gene-AO053_03410;Name=AO053_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03410
GCA_005888185.1|LNKP01000029.1	Protein Homology	CDS	24156	25511	.	+	0	ID=cds-TMQ39444.1;Parent=gene-AO053_03410;Dbxref=NCBI_GP:TMQ39444.1;Name=TMQ39444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45077.1;locus_tag=AO053_03410;product=protein PmbA;protein_id=TMQ39444.1;transl_table=11
##sequence-region LNKP01000030.1 1 1447
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000030.1	Genbank	region	1	1447	.	+	.	ID=LNKP01000030.1:1..1447;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000030.1	Genbank	pseudogene	1	231	.	-	.	ID=gene-AO053_03415;Name=AO053_03415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03415;pseudo=true
GCA_005888185.1|LNKP01000030.1	Protein Homology	CDS	1	231	.	-	0	ID=cds-AO053_03415;Parent=gene-AO053_03415;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272655.1;locus_tag=AO053_03415;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000030.1	Genbank	gene	222	602	.	-	.	ID=gene-AO053_03420;Name=AO053_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03420
GCA_005888185.1|LNKP01000030.1	Protein Homology	CDS	222	602	.	-	0	ID=cds-TMQ39408.1;Parent=gene-AO053_03420;Dbxref=NCBI_GP:TMQ39408.1;Name=TMQ39408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44156.3;locus_tag=AO053_03420;product=hypothetical protein;protein_id=TMQ39408.1;transl_table=11
GCA_005888185.1|LNKP01000030.1	Genbank	pseudogene	599	1447	.	-	.	ID=gene-AO053_03425;Name=AO053_03425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03425;pseudo=true
GCA_005888185.1|LNKP01000030.1	Protein Homology	CDS	599	1447	.	-	0	ID=cds-AO053_03425;Parent=gene-AO053_03425;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57476.1;locus_tag=AO053_03425;pseudo=true;transl_table=11
##sequence-region LNKP01000031.1 1 4496
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000031.1	Genbank	region	1	4496	.	+	.	ID=LNKP01000031.1:1..4496;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000031.1	Genbank	gene	1	1763	.	-	.	ID=gene-AO053_03430;Name=AO053_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03430;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000031.1	Protein Homology	CDS	1	1763	.	-	0	ID=cds-TMQ39399.1;Parent=gene-AO053_03430;Dbxref=NCBI_GP:TMQ39399.1;Name=TMQ39399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996606.1;locus_tag=AO053_03430;partial=true;product=adhesin;protein_id=TMQ39399.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000031.1	Genbank	gene	1848	3485	.	-	.	ID=gene-AO053_03435;Name=AO053_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03435
GCA_005888185.1|LNKP01000031.1	Protein Homology	CDS	1848	3485	.	-	0	ID=cds-TMQ39400.1;Parent=gene-AO053_03435;Dbxref=NCBI_GP:TMQ39400.1;Name=TMQ39400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527701.1;locus_tag=AO053_03435;product=HMW2B%2C OMP-85 required for HMW1A and HMW2A secretion;protein_id=TMQ39400.1;transl_table=11
GCA_005888185.1|LNKP01000031.1	Genbank	pseudogene	3560	4496	.	-	.	ID=gene-AO053_03440;Name=AO053_03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03440;pseudo=true
GCA_005888185.1|LNKP01000031.1	Protein Homology	CDS	3560	4496	.	-	1	ID=cds-AO053_03440;Parent=gene-AO053_03440;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO053_03440;pseudo=true;transl_table=11
##sequence-region LNKP01000032.1 1 5792
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000032.1	Genbank	region	1	5792	.	+	.	ID=LNKP01000032.1:1..5792;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000032.1	Genbank	gene	395	595	.	+	.	ID=gene-AO053_03445;Name=AO053_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03445
GCA_005888185.1|LNKP01000032.1	GeneMarkS+	CDS	395	595	.	+	0	ID=cds-TMQ39381.1;Parent=gene-AO053_03445;Dbxref=NCBI_GP:TMQ39381.1;Name=TMQ39381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_03445;product=hypothetical protein;protein_id=TMQ39381.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	583	1194	.	+	.	ID=gene-AO053_03450;Name=AO053_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03450
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	583	1194	.	+	0	ID=cds-TMQ39382.1;Parent=gene-AO053_03450;Dbxref=NCBI_GP:TMQ39382.1;Name=TMQ39382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642482.1;locus_tag=AO053_03450;product=resolvase;protein_id=TMQ39382.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	1276	2211	.	-	.	ID=gene-AO053_03455;Name=AO053_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03455
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	1276	2211	.	-	0	ID=cds-TMQ39383.1;Parent=gene-AO053_03455;Dbxref=NCBI_GP:TMQ39383.1;Name=TMQ39383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642484.1;locus_tag=AO053_03455;product=cell filamentation protein Fic;protein_id=TMQ39383.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	2192	2371	.	-	.	ID=gene-AO053_03460;Name=AO053_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03460
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	2192	2371	.	-	0	ID=cds-TMQ39384.1;Parent=gene-AO053_03460;Dbxref=NCBI_GP:TMQ39384.1;Name=TMQ39384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167582.1;locus_tag=AO053_03460;product=hypothetical protein;protein_id=TMQ39384.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	2381	2704	.	-	.	ID=gene-AO053_03465;Name=AO053_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03465
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	2381	2704	.	-	0	ID=cds-TMQ39385.1;Parent=gene-AO053_03465;Dbxref=NCBI_GP:TMQ39385.1;Name=TMQ39385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005566970.1%2CRefSeq:WP_019518167.1;locus_tag=AO053_03465;product=hypothetical protein;protein_id=TMQ39385.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	2697	2948	.	-	.	ID=gene-AO053_03470;Name=AO053_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03470
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	2697	2948	.	-	0	ID=cds-TMQ39390.1;Parent=gene-AO053_03470;Dbxref=NCBI_GP:TMQ39390.1;Name=TMQ39390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005566968.1;locus_tag=AO053_03470;product=hypothetical protein;protein_id=TMQ39390.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	3169	3807	.	-	.	ID=gene-AO053_03475;Name=AO053_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03475
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	3169	3807	.	-	0	ID=cds-TMQ39386.1;Parent=gene-AO053_03475;Dbxref=NCBI_GP:TMQ39386.1;Name=TMQ39386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008989867.1;locus_tag=AO053_03475;product=hypothetical protein;protein_id=TMQ39386.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	3924	4484	.	-	.	ID=gene-AO053_03480;Name=AO053_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03480
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	3924	4484	.	-	0	ID=cds-TMQ39387.1;Parent=gene-AO053_03480;Dbxref=NCBI_GP:TMQ39387.1;Name=TMQ39387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638149.1;locus_tag=AO053_03480;product=hypothetical protein;protein_id=TMQ39387.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	4742	5011	.	-	.	ID=gene-AO053_03485;Name=AO053_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03485
GCA_005888185.1|LNKP01000032.1	Protein Homology	CDS	4742	5011	.	-	0	ID=cds-TMQ39388.1;Parent=gene-AO053_03485;Dbxref=NCBI_GP:TMQ39388.1;Name=TMQ39388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018346821.1;locus_tag=AO053_03485;product=hypothetical protein;protein_id=TMQ39388.1;transl_table=11
GCA_005888185.1|LNKP01000032.1	Genbank	gene	5134	5712	.	-	.	ID=gene-AO053_03490;Name=AO053_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03490
GCA_005888185.1|LNKP01000032.1	GeneMarkS+	CDS	5134	5712	.	-	0	ID=cds-TMQ39389.1;Parent=gene-AO053_03490;Dbxref=NCBI_GP:TMQ39389.1;Name=TMQ39389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_03490;product=hypothetical protein;protein_id=TMQ39389.1;transl_table=11
##sequence-region LNKP01000033.1 1 1056
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000033.1	Genbank	region	1	1056	.	+	.	ID=LNKP01000033.1:1..1056;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000033.1	Genbank	pseudogene	1	1056	.	+	.	ID=gene-AO053_03495;Name=AO053_03495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03495;pseudo=true
GCA_005888185.1|LNKP01000033.1	Protein Homology	CDS	1	1056	.	+	0	ID=cds-AO053_03495;Parent=gene-AO053_03495;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO053_03495;pseudo=true;transl_table=11
##sequence-region LNKP01000034.1 1 1318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000034.1	Genbank	region	1	1318	.	+	.	ID=LNKP01000034.1:1..1318;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000034.1	Genbank	gene	1	866	.	-	.	ID=gene-AO053_03500;Name=AO053_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03500;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000034.1	Protein Homology	CDS	1	866	.	-	0	ID=cds-TMQ39293.1;Parent=gene-AO053_03500;Dbxref=NCBI_GP:TMQ39293.1;Name=TMQ39293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527857.1;locus_tag=AO053_03500;partial=true;product=phage head morphogenesis protein;protein_id=TMQ39293.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000034.1	Genbank	pseudogene	1231	1318	.	-	.	ID=gene-AO053_03505;Name=AO053_03505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03505;pseudo=true
GCA_005888185.1|LNKP01000034.1	Protein Homology	CDS	1231	1318	.	-	1	ID=cds-AO053_03505;Parent=gene-AO053_03505;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687738.1;locus_tag=AO053_03505;pseudo=true;transl_table=11
##sequence-region LNKP01000035.1 1 14514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000035.1	Genbank	region	1	14514	.	+	.	ID=LNKP01000035.1:1..14514;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000035.1	Genbank	pseudogene	1	796	.	+	.	ID=gene-AO053_03510;Name=AO053_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03510;pseudo=true
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	1	796	.	+	1	ID=cds-AO053_03510;Parent=gene-AO053_03510;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525442.1;locus_tag=AO053_03510;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	980	1291	.	-	.	ID=gene-AO053_03515;Name=AO053_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03515
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	980	1291	.	-	0	ID=cds-TMQ39292.1;Parent=gene-AO053_03515;Dbxref=NCBI_GP:TMQ39292.1;Name=TMQ39292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525441.1;locus_tag=AO053_03515;product=XRE family transcriptional regulator;protein_id=TMQ39292.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	1308	1586	.	-	.	ID=gene-AO053_03520;Name=AO053_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03520
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	1308	1586	.	-	0	ID=cds-TMQ39277.1;Parent=gene-AO053_03520;Dbxref=NCBI_GP:TMQ39277.1;Name=TMQ39277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525440.1;locus_tag=AO053_03520;product=Killer protein;protein_id=TMQ39277.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	1665	2279	.	+	.	ID=gene-AO053_03525;Name=AO053_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03525
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	1665	2279	.	+	0	ID=cds-TMQ39278.1;Parent=gene-AO053_03525;Dbxref=NCBI_GP:TMQ39278.1;Name=TMQ39278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525439.1;locus_tag=AO053_03525;product=hypothetical protein;protein_id=TMQ39278.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	2258	2527	.	+	.	ID=gene-AO053_03530;Name=AO053_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03530
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	2258	2527	.	+	0	ID=cds-TMQ39279.1;Parent=gene-AO053_03530;Dbxref=NCBI_GP:TMQ39279.1;Name=TMQ39279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525438.1;locus_tag=AO053_03530;product=DNA helicase UvrD;protein_id=TMQ39279.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	2546	3313	.	+	.	ID=gene-AO053_03535;Name=AO053_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03535
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	2546	3313	.	+	0	ID=cds-TMQ39280.1;Parent=gene-AO053_03535;Dbxref=NCBI_GP:TMQ39280.1;Name=TMQ39280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536840.1;locus_tag=AO053_03535;product=hypothetical protein;protein_id=TMQ39280.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	3300	3860	.	+	.	ID=gene-AO053_03540;Name=AO053_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03540
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	3300	3860	.	+	0	ID=cds-TMQ39281.1;Parent=gene-AO053_03540;Dbxref=NCBI_GP:TMQ39281.1;Name=TMQ39281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525436.1;locus_tag=AO053_03540;product=hypothetical protein;protein_id=TMQ39281.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	3861	5462	.	+	.	ID=gene-AO053_03545;Name=AO053_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03545
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	3861	5462	.	+	0	ID=cds-TMQ39282.1;Parent=gene-AO053_03545;Dbxref=NCBI_GP:TMQ39282.1;Name=TMQ39282.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:NP_536842.1;locus_tag=AO053_03545;product=hypothetical protein;protein_id=TMQ39282.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	6010	6085	.	-	.	ID=gene-AO053_03550;Name=AO053_03550;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_03550
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	tRNA	6010	6085	.	-	.	ID=rna-AO053_03550;Parent=gene-AO053_03550;anticodon=(pos:complement(6050..6052));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03550;product=tRNA-Lys
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	exon	6010	6085	.	-	.	ID=exon-AO053_03550-1;Parent=rna-AO053_03550;anticodon=(pos:complement(6050..6052));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03550;product=tRNA-Lys
GCA_005888185.1|LNKP01000035.1	Genbank	gene	6137	6223	.	-	.	ID=gene-AO053_03555;Name=AO053_03555;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_03555
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	tRNA	6137	6223	.	-	.	ID=rna-AO053_03555;Parent=gene-AO053_03555;anticodon=(pos:complement(6187..6189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03555;product=tRNA-Leu
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	exon	6137	6223	.	-	.	ID=exon-AO053_03555-1;Parent=rna-AO053_03555;anticodon=(pos:complement(6187..6189));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03555;product=tRNA-Leu
GCA_005888185.1|LNKP01000035.1	Genbank	gene	6251	6324	.	-	.	ID=gene-AO053_03560;Name=AO053_03560;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_03560
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	tRNA	6251	6324	.	-	.	ID=rna-AO053_03560;Parent=gene-AO053_03560;anticodon=(pos:complement(6290..6292));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03560;product=tRNA-Cys
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	exon	6251	6324	.	-	.	ID=exon-AO053_03560-1;Parent=rna-AO053_03560;anticodon=(pos:complement(6290..6292));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03560;product=tRNA-Cys
GCA_005888185.1|LNKP01000035.1	Genbank	gene	6331	6406	.	-	.	ID=gene-AO053_03565;Name=AO053_03565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_03565
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	tRNA	6331	6406	.	-	.	ID=rna-AO053_03565;Parent=gene-AO053_03565;anticodon=(pos:complement(6371..6373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03565;product=tRNA-Gly
GCA_005888185.1|LNKP01000035.1	tRNAscan-SE	exon	6331	6406	.	-	.	ID=exon-AO053_03565-1;Parent=rna-AO053_03565;anticodon=(pos:complement(6371..6373));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03565;product=tRNA-Gly
GCA_005888185.1|LNKP01000035.1	Genbank	gene	6653	7762	.	+	.	ID=gene-AO053_03570;Name=AO053_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03570
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	6653	7762	.	+	0	ID=cds-TMQ39283.1;Parent=gene-AO053_03570;Dbxref=NCBI_GP:TMQ39283.1;Name=TMQ39283.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44502.1;locus_tag=AO053_03570;product=cystathionine gamma-synthase;protein_id=TMQ39283.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	7775	8770	.	+	.	ID=gene-AO053_03575;Name=AO053_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03575
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	7775	8770	.	+	0	ID=cds-TMQ39284.1;Parent=gene-AO053_03575;Dbxref=NCBI_GP:TMQ39284.1;Name=TMQ39284.1;Note=fermentative%3B catalyzes the formationof pyruvate from lactate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054803.1;locus_tag=AO053_03575;product=lactate dehydrogenase;protein_id=TMQ39284.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	8890	9213	.	+	.	ID=gene-AO053_03580;Name=AO053_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03580
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	8890	9213	.	+	0	ID=cds-TMQ39285.1;Parent=gene-AO053_03580;Dbxref=NCBI_GP:TMQ39285.1;Name=TMQ39285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054802.1;locus_tag=AO053_03580;product=thioredoxin;protein_id=TMQ39285.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	9263	9535	.	-	.	ID=gene-AO053_03585;Name=AO053_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03585
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	9263	9535	.	-	0	ID=cds-TMQ39286.1;Parent=gene-AO053_03585;Dbxref=NCBI_GP:TMQ39286.1;Name=TMQ39286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525431.1;locus_tag=AO053_03585;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=TMQ39286.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	9546	9803	.	-	.	ID=gene-AO053_03590;Name=AO053_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03590
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	9546	9803	.	-	0	ID=cds-TMQ39287.1;Parent=gene-AO053_03590;Dbxref=NCBI_GP:TMQ39287.1;Name=TMQ39287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663184.1;locus_tag=AO053_03590;product=hypothetical protein;protein_id=TMQ39287.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	9865	10653	.	-	.	ID=gene-AO053_03595;Name=AO053_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03595
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	9865	10653	.	-	0	ID=cds-TMQ39288.1;Parent=gene-AO053_03595;Dbxref=NCBI_GP:TMQ39288.1;Name=TMQ39288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766755.1;locus_tag=AO053_03595;product=deoxyribonuclease;protein_id=TMQ39288.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	10708	11217	.	-	.	ID=gene-AO053_03600;Name=AO053_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03600
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	10708	11217	.	-	0	ID=cds-TMQ39289.1;Parent=gene-AO053_03600;Dbxref=NCBI_GP:TMQ39289.1;Name=TMQ39289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525429.1;locus_tag=AO053_03600;product=peptidylprolyl isomerase;protein_id=TMQ39289.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	11320	12699	.	+	.	ID=gene-AO053_03605;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AO053_03605
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	11320	12699	.	+	0	ID=cds-TMQ39290.1;Parent=gene-AO053_03605;Dbxref=NCBI_GP:TMQ39290.1;Name=TMQ39290.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699864.1;locus_tag=AO053_03605;product=cysteinyl-tRNA synthetase;protein_id=TMQ39290.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	gene	12860	13720	.	-	.	ID=gene-AO053_03610;Name=AO053_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03610
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	12860	13720	.	-	0	ID=cds-TMQ39291.1;Parent=gene-AO053_03610;Dbxref=NCBI_GP:TMQ39291.1;Name=TMQ39291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708204.1;locus_tag=AO053_03610;product=acyl-CoA thioesterase II;protein_id=TMQ39291.1;transl_table=11
GCA_005888185.1|LNKP01000035.1	Genbank	pseudogene	13839	14514	.	-	.	ID=gene-AO053_03615;Name=AO053_03615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03615;pseudo=true
GCA_005888185.1|LNKP01000035.1	Protein Homology	CDS	13839	14514	.	-	1	ID=cds-AO053_03615;Parent=gene-AO053_03615;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652533.1;locus_tag=AO053_03615;pseudo=true;transl_table=11
##sequence-region LNKP01000036.1 1 15322
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000036.1	Genbank	region	1	15322	.	+	.	ID=LNKP01000036.1:1..15322;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000036.1	Genbank	gene	1	1444	.	-	.	ID=gene-AO053_03620;Name=AO053_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03620;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	1	1444	.	-	0	ID=cds-TMQ39252.1;Parent=gene-AO053_03620;Dbxref=NCBI_GP:TMQ39252.1;Name=TMQ39252.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961823.1;locus_tag=AO053_03620;partial=true;product=anaerobic ribonucleoside triphosphate reductase;protein_id=TMQ39252.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	1725	2165	.	+	.	ID=gene-AO053_03625;Name=AO053_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03625
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	1725	2165	.	+	0	ID=cds-TMQ39253.1;Parent=gene-AO053_03625;Dbxref=NCBI_GP:TMQ39253.1;Name=TMQ39253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672289.1;locus_tag=AO053_03625;product=hypothetical protein;protein_id=TMQ39253.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	2158	2502	.	+	.	ID=gene-AO053_03630;Name=AO053_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03630
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	2158	2502	.	+	0	ID=cds-TMQ39254.1;Parent=gene-AO053_03630;Dbxref=NCBI_GP:TMQ39254.1;Name=TMQ39254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054796.1;locus_tag=AO053_03630;product=hypothetical protein;protein_id=TMQ39254.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	2515	3219	.	-	.	ID=gene-AO053_03635;Name=AO053_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03635
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	2515	3219	.	-	0	ID=cds-TMQ39255.1;Parent=gene-AO053_03635;Dbxref=NCBI_GP:TMQ39255.1;Name=TMQ39255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652537.1;locus_tag=AO053_03635;product=molecular chaperone GrpE;protein_id=TMQ39255.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	3211	4101	.	+	.	ID=gene-AO053_03640;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=AO053_03640
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	3211	4101	.	+	0	ID=cds-TMQ39256.1;Parent=gene-AO053_03640;Dbxref=NCBI_GP:TMQ39256.1;Name=TMQ39256.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH3.2;locus_tag=AO053_03640;product=NAD kinase;protein_id=TMQ39256.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	4213	5889	.	+	.	ID=gene-AO053_03645;Name=AO053_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03645
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	4213	5889	.	+	0	ID=cds-TMQ39257.1;Parent=gene-AO053_03645;Dbxref=NCBI_GP:TMQ39257.1;Name=TMQ39257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44496.1;locus_tag=AO053_03645;product=DNA repair protein RecN;protein_id=TMQ39257.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	5974	8919	.	-	.	ID=gene-AO053_03650;Name=AO053_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03650
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	5974	8919	.	-	0	ID=cds-TMQ39258.1;Parent=gene-AO053_03650;Dbxref=NCBI_GP:TMQ39258.1;Name=TMQ39258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44419.1;locus_tag=AO053_03650;product=glutamine-synthetase adenylyltransferase;protein_id=TMQ39258.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	8925	9860	.	-	.	ID=gene-AO053_03655;Name=AO053_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03655
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	8925	9860	.	-	0	ID=cds-TMQ39259.1;Parent=gene-AO053_03655;Dbxref=NCBI_GP:TMQ39259.1;Name=TMQ39259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH6.1;locus_tag=AO053_03655;product=tRNA dimethylallyltransferase;protein_id=TMQ39259.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	9868	11757	.	-	.	ID=gene-AO053_03660;Name=AO053_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03660
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	9868	11757	.	-	0	ID=cds-TMQ39260.1;Parent=gene-AO053_03660;Dbxref=NCBI_GP:TMQ39260.1;Name=TMQ39260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH7.1;locus_tag=AO053_03660;product=DNA mismatch repair protein MutL;protein_id=TMQ39260.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	11758	13056	.	-	.	ID=gene-AO053_03665;Name=AO053_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03665
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	11758	13056	.	-	0	ID=cds-TMQ39261.1;Parent=gene-AO053_03665;Dbxref=NCBI_GP:TMQ39261.1;Name=TMQ39261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691002.1;locus_tag=AO053_03665;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TMQ39261.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	13064	13540	.	-	.	ID=gene-AO053_03670;Name=AO053_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03670
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	13064	13540	.	-	0	ID=cds-TMQ39262.1;Parent=gene-AO053_03670;Dbxref=NCBI_GP:TMQ39262.1;Name=TMQ39262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627897.1;locus_tag=AO053_03670;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=TMQ39262.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	13616	14098	.	-	.	ID=gene-AO053_03675;Name=AO053_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03675
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	13616	14098	.	-	0	ID=cds-TMQ39263.1;Parent=gene-AO053_03675;Dbxref=NCBI_GP:TMQ39263.1;Name=TMQ39263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663232.1;locus_tag=AO053_03675;product=7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase;protein_id=TMQ39263.1;transl_table=11
GCA_005888185.1|LNKP01000036.1	Genbank	gene	14107	15322	.	-	.	ID=gene-AO053_03680;Name=AO053_03680;end_range=15322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03680;partial=true
GCA_005888185.1|LNKP01000036.1	Protein Homology	CDS	14107	15322	.	-	1	ID=cds-TMQ39264.1;Parent=gene-AO053_03680;Dbxref=NCBI_GP:TMQ39264.1;Name=TMQ39264.1;end_range=15322,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44439.1;locus_tag=AO053_03680;partial=true;product=poly(A) polymerase;protein_id=TMQ39264.1;transl_table=11
##sequence-region LNKP01000037.1 1 7221
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000037.1	Genbank	region	1	7221	.	+	.	ID=LNKP01000037.1:1..7221;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000037.1	Genbank	pseudogene	1	226	.	-	.	ID=gene-AO053_03685;Name=AO053_03685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03685;pseudo=true
GCA_005888185.1|LNKP01000037.1	Protein Homology	CDS	1	226	.	-	0	ID=cds-AO053_03685;Parent=gene-AO053_03685;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649783.1;locus_tag=AO053_03685;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000037.1	Genbank	gene	389	826	.	-	.	ID=gene-AO053_03690;Name=AO053_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03690
GCA_005888185.1|LNKP01000037.1	Protein Homology	CDS	389	826	.	-	0	ID=cds-TMQ39197.1;Parent=gene-AO053_03690;Dbxref=NCBI_GP:TMQ39197.1;Name=TMQ39197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766772.1;locus_tag=AO053_03690;product=RNA polymerase-binding protein DksA;protein_id=TMQ39197.1;transl_table=11
GCA_005888185.1|LNKP01000037.1	Genbank	gene	1085	3451	.	+	.	ID=gene-AO053_03695;Name=AO053_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03695
GCA_005888185.1|LNKP01000037.1	Protein Homology	CDS	1085	3451	.	+	0	ID=cds-TMQ39198.1;Parent=gene-AO053_03695;Dbxref=NCBI_GP:TMQ39198.1;Name=TMQ39198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44408.1;locus_tag=AO053_03695;product=recombinase;protein_id=TMQ39198.1;transl_table=11
GCA_005888185.1|LNKP01000037.1	Genbank	gene	3492	5255	.	+	.	ID=gene-AO053_03700;Name=AO053_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03700
GCA_005888185.1|LNKP01000037.1	Protein Homology	CDS	3492	5255	.	+	0	ID=cds-TMQ39199.1;Parent=gene-AO053_03700;Dbxref=NCBI_GP:TMQ39199.1;Name=TMQ39199.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691014.1;locus_tag=AO053_03700;product=lipid A export permease/ATP-binding protein MsbA;protein_id=TMQ39199.1;transl_table=11
GCA_005888185.1|LNKP01000037.1	Genbank	gene	5328	6326	.	+	.	ID=gene-AO053_03705;Name=AO053_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03705
GCA_005888185.1|LNKP01000037.1	Protein Homology	CDS	5328	6326	.	+	0	ID=cds-TMQ39200.1;Parent=gene-AO053_03705;Dbxref=NCBI_GP:TMQ39200.1;Name=TMQ39200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UB80.1;locus_tag=AO053_03705;product=tetraacyldisaccharide 4'-kinase;protein_id=TMQ39200.1;transl_table=11
GCA_005888185.1|LNKP01000037.1	Genbank	gene	6397	7161	.	+	.	ID=gene-AO053_03710;Name=AO053_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03710
GCA_005888185.1|LNKP01000037.1	Protein Homology	CDS	6397	7161	.	+	0	ID=cds-TMQ39201.1;Parent=gene-AO053_03710;Dbxref=NCBI_GP:TMQ39201.1;Name=TMQ39201.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525417.1;locus_tag=AO053_03710;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=TMQ39201.1;transl_table=11
##sequence-region LNKP01000038.1 1 49276
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000038.1	Genbank	region	1	49276	.	+	.	ID=LNKP01000038.1:1..49276;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000038.1	Genbank	gene	72	1901	.	+	.	ID=gene-AO053_03715;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AO053_03715
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	72	1901	.	+	0	ID=cds-TMQ39124.1;Parent=gene-AO053_03715;Dbxref=NCBI_GP:TMQ39124.1;Name=TMQ39124.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326539.1;locus_tag=AO053_03715;product=excinuclease ABC subunit C;protein_id=TMQ39124.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	1999	2712	.	+	.	ID=gene-AO053_03720;Name=AO053_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03720
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	1999	2712	.	+	0	ID=cds-TMQ39125.1;Parent=gene-AO053_03720;Dbxref=NCBI_GP:TMQ39125.1;Name=TMQ39125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643446.1;locus_tag=AO053_03720;product=hypothetical protein;protein_id=TMQ39125.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	2727	3077	.	-	.	ID=gene-AO053_03725;Name=AO053_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03725
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	2727	3077	.	-	0	ID=cds-TMQ39126.1;Parent=gene-AO053_03725;Dbxref=NCBI_GP:TMQ39126.1;Name=TMQ39126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525414.1;locus_tag=AO053_03725;product=hypothetical protein;protein_id=TMQ39126.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	3181	3735	.	+	.	ID=gene-AO053_03730;Name=AO053_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03730
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	3181	3735	.	+	0	ID=cds-TMQ39127.1;Parent=gene-AO053_03730;Dbxref=NCBI_GP:TMQ39127.1;Name=TMQ39127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326535.1;locus_tag=AO053_03730;product=hypothetical protein;protein_id=TMQ39127.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	3792	3881	.	-	.	ID=gene-AO053_03735;Name=AO053_03735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_03735
GCA_005888185.1|LNKP01000038.1	tRNAscan-SE	tRNA	3792	3881	.	-	.	ID=rna-AO053_03735;Parent=gene-AO053_03735;anticodon=(pos:complement(3845..3847));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03735;product=tRNA-Ser
GCA_005888185.1|LNKP01000038.1	tRNAscan-SE	exon	3792	3881	.	-	.	ID=exon-AO053_03735-1;Parent=rna-AO053_03735;anticodon=(pos:complement(3845..3847));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_03735;product=tRNA-Ser
GCA_005888185.1|LNKP01000038.1	Genbank	gene	4062	4724	.	+	.	ID=gene-AO053_03740;Name=AO053_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03740
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	4062	4724	.	+	0	ID=cds-TMQ39128.1;Parent=gene-AO053_03740;Dbxref=NCBI_GP:TMQ39128.1;Name=TMQ39128.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628031.1;locus_tag=AO053_03740;product=hypothetical protein;protein_id=TMQ39128.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	4784	5848	.	+	.	ID=gene-AO053_03745;Name=AO053_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03745
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	4784	5848	.	+	0	ID=cds-TMQ39129.1;Parent=gene-AO053_03745;Dbxref=NCBI_GP:TMQ39129.1;Name=TMQ39129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693878.1;locus_tag=AO053_03745;product=hypothetical protein;protein_id=TMQ39129.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	5848	6522	.	+	.	ID=gene-AO053_03750;Name=AO053_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03750
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	5848	6522	.	+	0	ID=cds-TMQ39130.1;Parent=gene-AO053_03750;Dbxref=NCBI_GP:TMQ39130.1;Name=TMQ39130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525411.1;locus_tag=AO053_03750;product=RNA pseudouridine synthase;protein_id=TMQ39130.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	6570	7373	.	+	.	ID=gene-AO053_03755;Name=AO053_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03755
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	6570	7373	.	+	0	ID=cds-TMQ39131.1;Parent=gene-AO053_03755;Dbxref=NCBI_GP:TMQ39131.1;Name=TMQ39131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356007.1;locus_tag=AO053_03755;product=exodeoxyribonuclease III;protein_id=TMQ39131.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	7383	8159	.	+	.	ID=gene-AO053_03760;Name=AO053_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03760
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	7383	8159	.	+	0	ID=cds-TMQ39132.1;Parent=gene-AO053_03760;Dbxref=NCBI_GP:TMQ39132.1;Name=TMQ39132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663265.1;locus_tag=AO053_03760;product=hypothetical protein;protein_id=TMQ39132.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	8210	8698	.	-	.	ID=gene-AO053_03765;Name=AO053_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03765
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	8210	8698	.	-	0	ID=cds-TMQ39133.1;Parent=gene-AO053_03765;Dbxref=NCBI_GP:TMQ39133.1;Name=TMQ39133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687480.1;locus_tag=AO053_03765;product=rod shape-determining protein MreD;protein_id=TMQ39133.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	8698	9753	.	-	.	ID=gene-AO053_03770;Name=AO053_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03770
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	8698	9753	.	-	0	ID=cds-TMQ39134.1;Parent=gene-AO053_03770;Dbxref=NCBI_GP:TMQ39134.1;Name=TMQ39134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995715.1;locus_tag=AO053_03770;product=rod shape-determining protein MreC;protein_id=TMQ39134.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	9833	10888	.	-	.	ID=gene-AO053_03775;Name=AO053_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03775
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	9833	10888	.	-	0	ID=cds-TMQ39135.1;Parent=gene-AO053_03775;Dbxref=NCBI_GP:TMQ39135.1;Name=TMQ39135.1;Note=functions in MreBCD complex in some organisms;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649840.1;locus_tag=AO053_03775;product=rod shape-determining protein MreB;protein_id=TMQ39135.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	11020	12798	.	-	.	ID=gene-AO053_03780;Name=AO053_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03780
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	11020	12798	.	-	0	ID=cds-TMQ39136.1;Parent=gene-AO053_03780;Dbxref=NCBI_GP:TMQ39136.1;Name=TMQ39136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663266.1;locus_tag=AO053_03780;product=ABC transporter ATP-binding protein;protein_id=TMQ39136.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	13004	14659	.	+	.	ID=gene-AO053_03785;Name=AO053_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03785
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	13004	14659	.	+	0	ID=cds-TMQ39137.1;Parent=gene-AO053_03785;Dbxref=NCBI_GP:TMQ39137.1;Name=TMQ39137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550621.1;locus_tag=AO053_03785;product=transporter;protein_id=TMQ39137.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	14784	15092	.	+	.	ID=gene-AO053_03790;Name=AO053_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03790
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	14784	15092	.	+	0	ID=cds-TMQ39138.1;Parent=gene-AO053_03790;Dbxref=NCBI_GP:TMQ39138.1;Name=TMQ39138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652613.1;locus_tag=AO053_03790;product=ribosome-associated protein IOJAP;protein_id=TMQ39138.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	15146	15613	.	+	.	ID=gene-AO053_03795;Name=AO053_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03795
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	15146	15613	.	+	0	ID=cds-TMQ39139.1;Parent=gene-AO053_03795;Dbxref=NCBI_GP:TMQ39139.1;Name=TMQ39139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639560.1;locus_tag=AO053_03795;product=50S rRNA methyltransferase;protein_id=TMQ39139.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	15635	17590	.	+	.	ID=gene-AO053_03800;Name=AO053_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03800
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	15635	17590	.	+	0	ID=cds-TMQ39140.1;Parent=gene-AO053_03800;Dbxref=NCBI_GP:TMQ39140.1;Name=TMQ39140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326527.1;locus_tag=AO053_03800;product=penicillin-binding protein 2;protein_id=TMQ39140.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	17580	18695	.	+	.	ID=gene-AO053_03805;Name=AO053_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03805
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	17580	18695	.	+	0	ID=cds-TMQ39141.1;Parent=gene-AO053_03805;Dbxref=NCBI_GP:TMQ39141.1;Name=TMQ39141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44468.1;locus_tag=AO053_03805;product=rod shape-determining protein RodA;protein_id=TMQ39141.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	18748	19611	.	+	.	ID=gene-AO053_03810;Name=AO053_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03810
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	18748	19611	.	+	0	ID=cds-TMQ39142.1;Parent=gene-AO053_03810;Dbxref=NCBI_GP:TMQ39142.1;Name=TMQ39142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525405.1;locus_tag=AO053_03810;product=rare lipoprotein A;protein_id=TMQ39142.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	19627	20808	.	+	.	ID=gene-AO053_03815;Name=AO053_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03815
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	19627	20808	.	+	0	ID=cds-TMQ39143.1;Parent=gene-AO053_03815;Dbxref=NCBI_GP:TMQ39143.1;Name=TMQ39143.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271786.1;locus_tag=AO053_03815;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMQ39143.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	20864	21142	.	+	.	ID=gene-AO053_03820;Name=AO053_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03820
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	20864	21142	.	+	0	ID=cds-TMQ39144.1;Parent=gene-AO053_03820;Dbxref=NCBI_GP:TMQ39144.1;Name=TMQ39144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44465.1;locus_tag=AO053_03820;product=hypothetical protein;protein_id=TMQ39144.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	21144	21782	.	+	.	ID=gene-AO053_03825;Name=AO053_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03825
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	21144	21782	.	+	0	ID=cds-TMQ39145.1;Parent=gene-AO053_03825;Dbxref=NCBI_GP:TMQ39145.1;Name=TMQ39145.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525403.1;locus_tag=AO053_03825;product=lipoate--protein ligase;protein_id=TMQ39145.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	21836	22798	.	+	.	ID=gene-AO053_03830;Name=AO053_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03830
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	21836	22798	.	+	0	ID=cds-TMQ39146.1;Parent=gene-AO053_03830;Dbxref=NCBI_GP:TMQ39146.1;Name=TMQ39146.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663288.1;locus_tag=AO053_03830;product=lipoyl synthase;protein_id=TMQ39146.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	23049	24056	.	+	.	ID=gene-AO053_03835;Name=AO053_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03835
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	23049	24056	.	+	0	ID=cds-TMQ39147.1;Parent=gene-AO053_03835;Dbxref=NCBI_GP:TMQ39147.1;Name=TMQ39147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639585.1;locus_tag=AO053_03835;product=citrate (pro-3S)-lyase;protein_id=TMQ39147.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	24094	24381	.	+	.	ID=gene-AO053_03840;Name=AO053_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03840
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	24094	24381	.	+	0	ID=cds-TMQ39148.1;Parent=gene-AO053_03840;Dbxref=NCBI_GP:TMQ39148.1;Name=TMQ39148.1;Note=acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657824.1;locus_tag=AO053_03840;product=citrate lyase ACP;protein_id=TMQ39148.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	24378	25253	.	+	.	ID=gene-AO053_03845;Name=AO053_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03845
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	24378	25253	.	+	0	ID=cds-TMQ39149.1;Parent=gene-AO053_03845;Dbxref=NCBI_GP:TMQ39149.1;Name=TMQ39149.1;Note=citryl-ACP lyase%3B catalyzes the formation of acetate and oxaloacetate from citrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652631.1;locus_tag=AO053_03845;product=citrate lyase subunit beta;protein_id=TMQ39149.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	25268	26770	.	+	.	ID=gene-AO053_03850;Name=AO053_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03850
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	25268	26770	.	+	0	ID=cds-TMQ39150.1;Parent=gene-AO053_03850;Dbxref=NCBI_GP:TMQ39150.1;Name=TMQ39150.1;Note=citrate-ACP transferase%2C the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995727.1;locus_tag=AO053_03850;product=citrate lyase subunit alpha;protein_id=TMQ39150.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	26948	28348	.	+	.	ID=gene-AO053_03855;Name=AO053_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03855
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	26948	28348	.	+	0	ID=cds-TMQ39151.1;Parent=gene-AO053_03855;Dbxref=NCBI_GP:TMQ39151.1;Name=TMQ39151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668027.1;locus_tag=AO053_03855;product=2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase;protein_id=TMQ39151.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	28350	29789	.	+	.	ID=gene-AO053_03860;Name=AO053_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03860
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	28350	29789	.	+	0	ID=cds-TMQ39152.1;Parent=gene-AO053_03860;Dbxref=NCBI_GP:TMQ39152.1;Name=TMQ39152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995729.1;locus_tag=AO053_03860;product=hypothetical protein;protein_id=TMQ39152.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	30207	31631	.	+	.	ID=gene-AO053_03865;Name=AO053_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03865
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	30207	31631	.	+	0	ID=cds-TMQ39153.1;Parent=gene-AO053_03865;Dbxref=NCBI_GP:TMQ39153.1;Name=TMQ39153.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550626.1;locus_tag=AO053_03865;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB;protein_id=TMQ39153.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	31700	32359	.	-	.	ID=gene-AO053_03870;Name=AO053_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03870
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	31700	32359	.	-	0	ID=cds-TMQ39154.1;Parent=gene-AO053_03870;Dbxref=NCBI_GP:TMQ39154.1;Name=TMQ39154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525400.1;locus_tag=AO053_03870;product=uracil-DNA glycosylase;protein_id=TMQ39154.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	32608	32991	.	+	.	ID=gene-AO053_03875;Name=AO053_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03875
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	32608	32991	.	+	0	ID=cds-TMQ39155.1;Parent=gene-AO053_03875;Dbxref=NCBI_GP:TMQ39155.1;Name=TMQ39155.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPH6.1;locus_tag=AO053_03875;product=autonomous glycyl radical cofactor GrcA;protein_id=TMQ39155.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	33073	34197	.	-	.	ID=gene-AO053_03880;Name=AO053_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03880
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	33073	34197	.	-	0	ID=cds-TMQ39156.1;Parent=gene-AO053_03880;Dbxref=NCBI_GP:TMQ39156.1;Name=TMQ39156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527216.1;locus_tag=AO053_03880;product=adhesin;protein_id=TMQ39156.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	34212	36722	.	-	.	ID=gene-AO053_03885;Name=AO053_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03885
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	34212	36722	.	-	0	ID=cds-TMQ39157.1;Parent=gene-AO053_03885;Dbxref=NCBI_GP:TMQ39157.1;Name=TMQ39157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525397.1;locus_tag=AO053_03885;product=usher protein;protein_id=TMQ39157.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	36778	37473	.	-	.	ID=gene-AO053_03890;Name=AO053_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03890
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	36778	37473	.	-	0	ID=cds-TMQ39158.1;Parent=gene-AO053_03890;Dbxref=NCBI_GP:TMQ39158.1;Name=TMQ39158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527214.1;locus_tag=AO053_03890;product=molecular chaperone;protein_id=TMQ39158.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	37542	38147	.	-	.	ID=gene-AO053_03895;Name=AO053_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03895
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	37542	38147	.	-	0	ID=cds-TMQ39159.1;Parent=gene-AO053_03895;Dbxref=NCBI_GP:TMQ39159.1;Name=TMQ39159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525395.1;locus_tag=AO053_03895;product=fimbrial protein;protein_id=TMQ39159.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	38454	40250	.	+	.	ID=gene-AO053_03900;Name=AO053_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03900
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	38454	40250	.	+	0	ID=cds-TMQ39160.1;Parent=gene-AO053_03900;Dbxref=NCBI_GP:TMQ39160.1;Name=TMQ39160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991607.1;locus_tag=AO053_03900;product=elongation factor 4;protein_id=TMQ39160.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	40259	41308	.	+	.	ID=gene-AO053_03905;Name=AO053_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03905
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	40259	41308	.	+	0	ID=cds-TMQ39161.1;Parent=gene-AO053_03905;Dbxref=NCBI_GP:TMQ39161.1;Name=TMQ39161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639603.1;locus_tag=AO053_03905;product=S26 family signal peptidase;protein_id=TMQ39161.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	41310	41993	.	+	.	ID=gene-AO053_03910;Name=AO053_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03910
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	41310	41993	.	+	0	ID=cds-TMQ39162.1;Parent=gene-AO053_03910;Dbxref=NCBI_GP:TMQ39162.1;Name=TMQ39162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357168.1;locus_tag=AO053_03910;product=RNA-binding protein;protein_id=TMQ39162.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	41990	42898	.	+	.	ID=gene-AO053_03915;Name=AO053_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03915
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	41990	42898	.	+	0	ID=cds-TMQ39163.1;Parent=gene-AO053_03915;Dbxref=NCBI_GP:TMQ39163.1;Name=TMQ39163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525392.1;locus_tag=AO053_03915;product=GTPase Era;protein_id=TMQ39163.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	42963	43955	.	-	.	ID=gene-AO053_03920;Name=AO053_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03920
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	42963	43955	.	-	0	ID=cds-TMQ39164.1;Parent=gene-AO053_03920;Dbxref=NCBI_GP:TMQ39164.1;Name=TMQ39164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550632.1;locus_tag=AO053_03920;product=16S rRNA methyltransferase;protein_id=TMQ39164.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	44061	44465	.	+	.	ID=gene-AO053_03925;Name=AO053_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03925
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	44061	44465	.	+	0	ID=cds-TMQ39165.1;Parent=gene-AO053_03925;Dbxref=NCBI_GP:TMQ39165.1;Name=TMQ39165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271781.1;locus_tag=AO053_03925;product=DNA polymerase III subunit psi;protein_id=TMQ39165.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	44468	44908	.	+	.	ID=gene-AO053_03930;Name=AO053_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03930
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	44468	44908	.	+	0	ID=cds-TMQ39166.1;Parent=gene-AO053_03930;Dbxref=NCBI_GP:TMQ39166.1;Name=TMQ39166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525390.1;locus_tag=AO053_03930;product=ribosomal-protein-alanine acetyltransferase;protein_id=TMQ39166.1;transl_table=11
GCA_005888185.1|LNKP01000038.1	Protein Homology	pseudogene	44947	45854	.	-	.	ID=gene-AO053_03935;Name=AO053_03935;Note=disrupted;description=formate dehydrogenase accessory protein FdhE;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03935;pseudo=true
GCA_005888185.1|LNKP01000038.1	Genbank	pseudogene	45924	46316	.	-	.	ID=gene-AO053_03940;Name=AO053_03940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_03940;pseudo=true
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	45924	46316	.	-	0	ID=cds-AO053_03940;Parent=gene-AO053_03940;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693892.1;locus_tag=AO053_03940;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000038.1	Genbank	gene	48663	49274	.	-	.	ID=gene-AO053_03945;Name=AO053_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03945
GCA_005888185.1|LNKP01000038.1	Protein Homology	CDS	48663	49274	.	-	0	ID=cds-TMQ39167.1;Parent=gene-AO053_03945;Dbxref=NCBI_GP:TMQ39167.1;Name=TMQ39167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657859.1;locus_tag=AO053_03945;product=sulfate ABC transporter substrate-binding protein;protein_id=TMQ39167.1;transl_table=11
##sequence-region LNKP01000039.1 1 13517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000039.1	Genbank	region	1	13517	.	+	.	ID=LNKP01000039.1:1..13517;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000039.1	Genbank	gene	275	1087	.	+	.	ID=gene-AO053_03950;Name=AO053_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03950
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	275	1087	.	+	0	ID=cds-TMQ39082.1;Parent=gene-AO053_03950;Dbxref=NCBI_GP:TMQ39082.1;Name=TMQ39082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687439.1;locus_tag=AO053_03950;product=formate dehydrogenase accessory protein FdhD;protein_id=TMQ39082.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	1348	1812	.	+	.	ID=gene-AO053_03955;Name=AO053_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03955
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	1348	1812	.	+	0	ID=cds-TMQ39083.1;Parent=gene-AO053_03955;Dbxref=NCBI_GP:TMQ39083.1;Name=TMQ39083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634940.1;locus_tag=AO053_03955;product=rRNA maturation RNase YbeY;protein_id=TMQ39083.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	1831	2616	.	+	.	ID=gene-AO053_03960;Name=AO053_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03960
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	1831	2616	.	+	0	ID=cds-TMQ39084.1;Parent=gene-AO053_03960;Dbxref=NCBI_GP:TMQ39084.1;Name=TMQ39084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527209.1;locus_tag=AO053_03960;product=hypothetical protein;protein_id=TMQ39084.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	2652	4451	.	-	.	ID=gene-AO053_03965;Name=AO053_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03965
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	2652	4451	.	-	0	ID=cds-TMQ39085.1;Parent=gene-AO053_03965;Dbxref=NCBI_GP:TMQ39085.1;Name=TMQ39085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649895.1;locus_tag=AO053_03965;product=long-chain fatty acid--CoA ligase;protein_id=TMQ39085.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	4645	5664	.	-	.	ID=gene-AO053_03970;Name=AO053_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03970
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	4645	5664	.	-	0	ID=cds-TMQ39086.1;Parent=gene-AO053_03970;Dbxref=NCBI_GP:TMQ39086.1;Name=TMQ39086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326504.1;locus_tag=AO053_03970;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=TMQ39086.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	5915	6541	.	+	.	ID=gene-AO053_03975;Name=AO053_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03975
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	5915	6541	.	+	0	ID=cds-TMQ39087.1;Parent=gene-AO053_03975;Dbxref=NCBI_GP:TMQ39087.1;Name=TMQ39087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJK3.1;locus_tag=AO053_03975;product=guanylate kinase;protein_id=TMQ39087.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	6604	6870	.	+	.	ID=gene-AO053_03980;Name=AO053_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03980
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	6604	6870	.	+	0	ID=cds-TMQ39088.1;Parent=gene-AO053_03980;Dbxref=NCBI_GP:TMQ39088.1;Name=TMQ39088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995753.1;locus_tag=AO053_03980;product=DNA-directed RNA polymerase subunit omega;protein_id=TMQ39088.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	6943	9057	.	+	.	ID=gene-AO053_03985;Name=AO053_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03985
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	6943	9057	.	+	0	ID=cds-TMQ39089.1;Parent=gene-AO053_03985;Dbxref=NCBI_GP:TMQ39089.1;Name=TMQ39089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550639.1;locus_tag=AO053_03985;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=TMQ39089.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	9054	11135	.	+	.	ID=gene-AO053_03990;Name=AO053_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03990
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	9054	11135	.	+	0	ID=cds-TMQ39090.1;Parent=gene-AO053_03990;Dbxref=NCBI_GP:TMQ39090.1;Name=TMQ39090.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43809.1;locus_tag=AO053_03990;product=ATP-dependent DNA helicase RecG;protein_id=TMQ39090.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	11165	11974	.	+	.	ID=gene-AO053_03995;Name=AO053_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_03995
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	11165	11974	.	+	0	ID=cds-TMQ39091.1;Parent=gene-AO053_03995;Dbxref=NCBI_GP:TMQ39091.1;Name=TMQ39091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638643.1;locus_tag=AO053_03995;product=glutamate racemase;protein_id=TMQ39091.1;transl_table=11
GCA_005888185.1|LNKP01000039.1	Genbank	gene	12186	13331	.	+	.	ID=gene-AO053_04000;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=AO053_04000
GCA_005888185.1|LNKP01000039.1	Protein Homology	CDS	12186	13331	.	+	0	ID=cds-TMQ39092.1;Parent=gene-AO053_04000;Dbxref=NCBI_GP:TMQ39092.1;Name=TMQ39092.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005558021.1;locus_tag=AO053_04000;product=alpha-hydroxy-acid oxidizing enzyme;protein_id=TMQ39092.1;transl_table=11
##sequence-region LNKP01000040.1 1 30528
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000040.1	Genbank	region	1	30528	.	+	.	ID=LNKP01000040.1:1..30528;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000040.1	Genbank	pseudogene	1	770	.	+	.	ID=gene-AO053_04005;Name=AO053_04005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04005;pseudo=true
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	1	770	.	+	2	ID=cds-AO053_04005;Parent=gene-AO053_04005;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527593.1;locus_tag=AO053_04005;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	904	2040	.	+	.	ID=gene-AO053_04010;Name=AO053_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04010
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	904	2040	.	+	0	ID=cds-TMQ39050.1;Parent=gene-AO053_04010;Dbxref=NCBI_GP:TMQ39050.1;Name=TMQ39050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525733.1;locus_tag=AO053_04010;product=hypothetical protein;protein_id=TMQ39050.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Protein Homology	pseudogene	2206	2858	.	+	.	ID=gene-AO053_04015;Name=AO053_04015;Note=disrupted;description=transposase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04015;pseudo=true
GCA_005888185.1|LNKP01000040.1	Genbank	gene	2944	3918	.	-	.	ID=gene-AO053_04020;Name=AO053_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04020
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	2944	3918	.	-	0	ID=cds-TMQ39051.1;Parent=gene-AO053_04020;Dbxref=NCBI_GP:TMQ39051.1;Name=TMQ39051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499992.1;locus_tag=AO053_04020;product=cobalt transporter;protein_id=TMQ39051.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	3921	4541	.	-	.	ID=gene-AO053_04025;Name=AO053_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04025
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	3921	4541	.	-	0	ID=cds-TMQ39052.1;Parent=gene-AO053_04025;Dbxref=NCBI_GP:TMQ39052.1;Name=TMQ39052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652991.1;locus_tag=AO053_04025;product=hypothetical protein;protein_id=TMQ39052.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	4891	5166	.	+	.	ID=gene-AO053_04030;Name=AO053_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04030
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	4891	5166	.	+	0	ID=cds-TMQ39053.1;Parent=gene-AO053_04030;Dbxref=NCBI_GP:TMQ39053.1;Name=TMQ39053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525736.1;locus_tag=AO053_04030;product=translation repressor RelB;protein_id=TMQ39053.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	5163	5426	.	+	.	ID=gene-AO053_04035;Name=AO053_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04035
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	5163	5426	.	+	0	ID=cds-TMQ39054.1;Parent=gene-AO053_04035;Dbxref=NCBI_GP:TMQ39054.1;Name=TMQ39054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525737.1;locus_tag=AO053_04035;product=addiction module toxin RelE;protein_id=TMQ39054.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	5521	7191	.	+	.	ID=gene-AO053_04040;Name=AO053_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04040
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	5521	7191	.	+	0	ID=cds-TMQ39055.1;Parent=gene-AO053_04040;Dbxref=NCBI_GP:TMQ39055.1;Name=TMQ39055.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710213.1;locus_tag=AO053_04040;product=ABC transporter ATP-binding protein;protein_id=TMQ39055.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	7252	7593	.	+	.	ID=gene-AO053_04045;Name=AO053_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04045
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	7252	7593	.	+	0	ID=cds-TMQ39056.1;Parent=gene-AO053_04045;Dbxref=NCBI_GP:TMQ39056.1;Name=TMQ39056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995879.1;locus_tag=AO053_04045;product=hypothetical protein;protein_id=TMQ39056.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	7598	9568	.	+	.	ID=gene-AO053_04050;Name=AO053_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04050
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	7598	9568	.	+	0	ID=cds-TMQ39057.1;Parent=gene-AO053_04050;Dbxref=NCBI_GP:TMQ39057.1;Name=TMQ39057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44140.2;locus_tag=AO053_04050;product=tRNA(Met) cytidine acetyltransferase;protein_id=TMQ39057.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	9840	13280	.	+	.	ID=gene-AO053_04055;Name=AO053_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04055
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	9840	13280	.	+	0	ID=cds-TMQ39058.1;Parent=gene-AO053_04055;Dbxref=NCBI_GP:TMQ39058.1;Name=TMQ39058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054672.1;locus_tag=AO053_04055;product=transcription-repair coupling factor;protein_id=TMQ39058.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	13333	14724	.	-	.	ID=gene-AO053_04060;Name=AO053_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04060
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	13333	14724	.	-	0	ID=cds-TMQ39059.1;Parent=gene-AO053_04060;Dbxref=NCBI_GP:TMQ39059.1;Name=TMQ39059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666745.1;locus_tag=AO053_04060;product=serine peptidase;protein_id=TMQ39059.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	14918	15808	.	+	.	ID=gene-AO053_04065;Name=AO053_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04065
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	14918	15808	.	+	0	ID=cds-TMQ39060.1;Parent=gene-AO053_04065;Dbxref=NCBI_GP:TMQ39060.1;Name=TMQ39060.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666747.1;locus_tag=AO053_04065;product=acetyl-CoA carboxylase subunit beta;protein_id=TMQ39060.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	15810	17114	.	+	.	ID=gene-AO053_04070;Name=AO053_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04070
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	15810	17114	.	+	0	ID=cds-TMQ39061.1;Parent=gene-AO053_04070;Dbxref=NCBI_GP:TMQ39061.1;Name=TMQ39061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687313.1;locus_tag=AO053_04070;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=TMQ39061.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	17984	18664	.	-	.	ID=gene-AO053_04075;Name=AO053_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04075
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	17984	18664	.	-	0	ID=cds-TMQ39062.1;Parent=gene-AO053_04075;Dbxref=NCBI_GP:TMQ39062.1;Name=TMQ39062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657563.1;locus_tag=AO053_04075;product=hypothetical protein;protein_id=TMQ39062.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	18822	19898	.	+	.	ID=gene-AO053_04080;Name=AO053_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04080
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	18822	19898	.	+	0	ID=cds-TMQ39063.1;Parent=gene-AO053_04080;Dbxref=NCBI_GP:TMQ39063.1;Name=TMQ39063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659627.1;locus_tag=AO053_04080;product=homoserine O-acetyltransferase;protein_id=TMQ39063.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	19953	22601	.	-	.	ID=gene-AO053_04085;Name=AO053_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04085
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	19953	22601	.	-	0	ID=cds-TMQ39064.1;Parent=gene-AO053_04085;Dbxref=NCBI_GP:TMQ39064.1;Name=TMQ39064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961907.1;locus_tag=AO053_04085;product=DNA gyrase subunit A;protein_id=TMQ39064.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	22659	22895	.	+	.	ID=gene-AO053_04090;Name=AO053_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04090
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	22659	22895	.	+	0	ID=cds-TMQ39065.1;Parent=gene-AO053_04090;Dbxref=NCBI_GP:TMQ39065.1;Name=TMQ39065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629822.1;locus_tag=AO053_04090;product=hypothetical protein;protein_id=TMQ39065.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	23201	24964	.	-	.	ID=gene-AO053_04095;Name=AO053_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04095
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	23201	24964	.	-	0	ID=cds-TMQ39066.1;Parent=gene-AO053_04095;Dbxref=NCBI_GP:TMQ39066.1;Name=TMQ39066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692282.1;locus_tag=AO053_04095;product=ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=TMQ39066.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	25101	25577	.	-	.	ID=gene-AO053_04100;Name=AO053_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04100
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	25101	25577	.	-	0	ID=cds-TMQ39067.1;Parent=gene-AO053_04100;Dbxref=NCBI_GP:TMQ39067.1;Name=TMQ39067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629826.1;locus_tag=AO053_04100;product=hypothetical protein;protein_id=TMQ39067.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	25813	26619	.	+	.	ID=gene-AO053_04105;Name=AO053_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04105
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	25813	26619	.	+	0	ID=cds-TMQ39068.1;Parent=gene-AO053_04105;Dbxref=NCBI_GP:TMQ39068.1;Name=TMQ39068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646671.1;locus_tag=AO053_04105;product=hypothetical protein;protein_id=TMQ39068.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	26671	27387	.	+	.	ID=gene-AO053_04110;Name=AO053_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04110
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	26671	27387	.	+	0	ID=cds-TMQ39069.1;Parent=gene-AO053_04110;Dbxref=NCBI_GP:TMQ39069.1;Name=TMQ39069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634714.1;locus_tag=AO053_04110;product=hydroxyacylglutathione hydrolase;protein_id=TMQ39069.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	27431	28291	.	-	.	ID=gene-AO053_04115;Name=AO053_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04115
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	27431	28291	.	-	0	ID=cds-TMQ39070.1;Parent=gene-AO053_04115;Dbxref=NCBI_GP:TMQ39070.1;Name=TMQ39070.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:E1X791.1;locus_tag=AO053_04115;product=tellurite resistance protein TehB;protein_id=TMQ39070.1;transl_table=11
GCA_005888185.1|LNKP01000040.1	Genbank	gene	28404	30458	.	-	.	ID=gene-AO053_04120;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=AO053_04120
GCA_005888185.1|LNKP01000040.1	Protein Homology	CDS	28404	30458	.	-	0	ID=cds-TMQ39071.1;Parent=gene-AO053_04120;Dbxref=NCBI_GP:TMQ39071.1;Name=TMQ39071.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525743.1;locus_tag=AO053_04120;product=methionine--tRNA ligase;protein_id=TMQ39071.1;transl_table=11
##sequence-region LNKP01000041.1 1 16900
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000041.1	Genbank	region	1	16900	.	+	.	ID=LNKP01000041.1:1..16900;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000041.1	Genbank	gene	179	829	.	+	.	ID=gene-AO053_04125;Name=AO053_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04125
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	179	829	.	+	0	ID=cds-TMQ39011.1;Parent=gene-AO053_04125;Dbxref=NCBI_GP:TMQ39011.1;Name=TMQ39011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629835.1;locus_tag=AO053_04125;product=hypothetical protein;protein_id=TMQ39011.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	842	1207	.	+	.	ID=gene-AO053_04130;Name=AO053_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04130
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	842	1207	.	+	0	ID=cds-TMQ39012.1;Parent=gene-AO053_04130;Dbxref=NCBI_GP:TMQ39012.1;Name=TMQ39012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499965.1;locus_tag=AO053_04130;product=hypothetical protein;protein_id=TMQ39012.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	1364	2476	.	+	.	ID=gene-AO053_04135;Name=AO053_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04135
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	1364	2476	.	+	0	ID=cds-TMQ39013.1;Parent=gene-AO053_04135;Dbxref=NCBI_GP:TMQ39013.1;Name=TMQ39013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650273.1;locus_tag=AO053_04135;product=sodium:proton antiporter;protein_id=TMQ39013.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	2701	2970	.	+	.	ID=gene-AO053_04140;Name=AO053_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04140
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	2701	2970	.	+	0	ID=cds-TMQ39014.1;Parent=gene-AO053_04140;Dbxref=NCBI_GP:TMQ39014.1;Name=TMQ39014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995905.1;locus_tag=AO053_04140;product=antitoxin MazE;protein_id=TMQ39014.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	2970	3323	.	+	.	ID=gene-AO053_04145;Name=AO053_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04145
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	2970	3323	.	+	0	ID=cds-TMQ39015.1;Parent=gene-AO053_04145;Dbxref=NCBI_GP:TMQ39015.1;Name=TMQ39015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646660.1;locus_tag=AO053_04145;product=growth inhibitor PemK;protein_id=TMQ39015.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	pseudogene	3436	3609	.	-	.	ID=gene-AO053_04150;Name=AO053_04150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04150;pseudo=true
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	3436	3609	.	-	0	ID=cds-AO053_04150;Parent=gene-AO053_04150;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642329.1;locus_tag=AO053_04150;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	3621	4283	.	-	.	ID=gene-AO053_04155;Name=AO053_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04155
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	3621	4283	.	-	0	ID=cds-TMQ39016.1;Parent=gene-AO053_04155;Dbxref=NCBI_GP:TMQ39016.1;Name=TMQ39016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525747.1;locus_tag=AO053_04155;product=NAD(P)H-dependent oxidoreductase;protein_id=TMQ39016.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	4397	5071	.	+	.	ID=gene-AO053_04160;Name=AO053_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04160
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	4397	5071	.	+	0	ID=cds-TMQ39017.1;Parent=gene-AO053_04160;Dbxref=NCBI_GP:TMQ39017.1;Name=TMQ39017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702163.1;locus_tag=AO053_04160;product=acylneuraminate cytidylyltransferase;protein_id=TMQ39017.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Protein Homology	pseudogene	5432	5741	.	+	.	ID=gene-AO053_04165;Name=AO053_04165;Note=disrupted;description=integrase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04165;pseudo=true
GCA_005888185.1|LNKP01000041.1	Genbank	gene	6140	6448	.	-	.	ID=gene-AO053_04170;Name=AO053_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04170
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	6140	6448	.	-	0	ID=cds-TMQ39018.1;Parent=gene-AO053_04170;Dbxref=NCBI_GP:TMQ39018.1;Name=TMQ39018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995911.1;locus_tag=AO053_04170;product=XRE family transcriptional regulator;protein_id=TMQ39018.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	6445	6783	.	-	.	ID=gene-AO053_04175;Name=AO053_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04175
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	6445	6783	.	-	0	ID=cds-TMQ39019.1;Parent=gene-AO053_04175;Dbxref=NCBI_GP:TMQ39019.1;Name=TMQ39019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995912.1;locus_tag=AO053_04175;product=toxin;protein_id=TMQ39019.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	7415	9607	.	-	.	ID=gene-AO053_04180;Name=AO053_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04180
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	7415	9607	.	-	0	ID=cds-TMQ39020.1;Parent=gene-AO053_04180;Dbxref=NCBI_GP:TMQ39020.1;Name=TMQ39020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525749.1;locus_tag=AO053_04180;product=DNA primase;protein_id=TMQ39020.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	9595	9987	.	-	.	ID=gene-AO053_04185;Name=AO053_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04185
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	9595	9987	.	-	0	ID=cds-TMQ39021.1;Parent=gene-AO053_04185;Dbxref=NCBI_GP:TMQ39021.1;Name=TMQ39021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671870.1;locus_tag=AO053_04185;product=hypothetical protein;protein_id=TMQ39021.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	9980	10663	.	-	.	ID=gene-AO053_04190;Name=AO053_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04190
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	9980	10663	.	-	0	ID=cds-TMQ39022.1;Parent=gene-AO053_04190;Dbxref=NCBI_GP:TMQ39022.1;Name=TMQ39022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525750.1;locus_tag=AO053_04190;product=hypothetical protein;protein_id=TMQ39022.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	10650	10853	.	-	.	ID=gene-AO053_04195;Name=AO053_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04195
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	10650	10853	.	-	0	ID=cds-TMQ39023.1;Parent=gene-AO053_04195;Dbxref=NCBI_GP:TMQ39023.1;Name=TMQ39023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995916.1;locus_tag=AO053_04195;product=hypothetical protein;protein_id=TMQ39023.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	10843	11214	.	-	.	ID=gene-AO053_04200;Name=AO053_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04200
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	10843	11214	.	-	0	ID=cds-TMQ39024.1;Parent=gene-AO053_04200;Dbxref=NCBI_GP:TMQ39024.1;Name=TMQ39024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005594667.1;locus_tag=AO053_04200;product=hypothetical protein;protein_id=TMQ39024.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	11207	12169	.	-	.	ID=gene-AO053_04205;Name=AO053_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04205
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	11207	12169	.	-	0	ID=cds-TMQ39025.1;Parent=gene-AO053_04205;Dbxref=NCBI_GP:TMQ39025.1;Name=TMQ39025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525752.1;locus_tag=AO053_04205;product=hypothetical protein;protein_id=TMQ39025.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	12430	12726	.	-	.	ID=gene-AO053_04210;Name=AO053_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04210
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	12430	12726	.	-	0	ID=cds-TMQ39026.1;Parent=gene-AO053_04210;Dbxref=NCBI_GP:TMQ39026.1;Name=TMQ39026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525753.1;locus_tag=AO053_04210;product=hypothetical protein;protein_id=TMQ39026.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	12726	13193	.	-	.	ID=gene-AO053_04215;Name=AO053_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04215
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	12726	13193	.	-	0	ID=cds-TMQ39027.1;Parent=gene-AO053_04215;Dbxref=NCBI_GP:TMQ39027.1;Name=TMQ39027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995924.1;locus_tag=AO053_04215;product=terminase;protein_id=TMQ39027.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	13174	13467	.	-	.	ID=gene-AO053_04220;Name=AO053_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04220
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	13174	13467	.	-	0	ID=cds-TMQ39028.1;Parent=gene-AO053_04220;Dbxref=NCBI_GP:TMQ39028.1;Name=TMQ39028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525755.1;locus_tag=AO053_04220;product=hypothetical protein;protein_id=TMQ39028.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	13483	13743	.	-	.	ID=gene-AO053_04225;Name=AO053_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04225
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	13483	13743	.	-	0	ID=cds-TMQ39029.1;Parent=gene-AO053_04225;Dbxref=NCBI_GP:TMQ39029.1;Name=TMQ39029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995927.1;locus_tag=AO053_04225;product=transcriptional regulator;protein_id=TMQ39029.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	13754	14002	.	-	.	ID=gene-AO053_04230;Name=AO053_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04230
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	13754	14002	.	-	0	ID=cds-TMQ39030.1;Parent=gene-AO053_04230;Dbxref=NCBI_GP:TMQ39030.1;Name=TMQ39030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525757.1;locus_tag=AO053_04230;product=transcriptional regulator;protein_id=TMQ39030.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	14209	15231	.	-	.	ID=gene-AO053_04235;Name=AO053_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04235
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	14209	15231	.	-	0	ID=cds-TMQ39031.1;Parent=gene-AO053_04235;Dbxref=NCBI_GP:TMQ39031.1;Name=TMQ39031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525758.1;locus_tag=AO053_04235;product=hypothetical protein;protein_id=TMQ39031.1;transl_table=11
GCA_005888185.1|LNKP01000041.1	Genbank	gene	15478	16734	.	-	.	ID=gene-AO053_04240;Name=AO053_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04240
GCA_005888185.1|LNKP01000041.1	Protein Homology	CDS	15478	16734	.	-	0	ID=cds-TMQ39032.1;Parent=gene-AO053_04240;Dbxref=NCBI_GP:TMQ39032.1;Name=TMQ39032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525759.1;locus_tag=AO053_04240;product=integrase;protein_id=TMQ39032.1;transl_table=11
##sequence-region LNKP01000042.1 1 10970
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000042.1	Genbank	region	1	10970	.	+	.	ID=LNKP01000042.1:1..10970;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000042.1	Genbank	gene	867	943	.	+	.	ID=gene-AO053_04245;Name=AO053_04245;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_04245
GCA_005888185.1|LNKP01000042.1	tRNAscan-SE	tRNA	867	943	.	+	.	ID=rna-AO053_04245;Parent=gene-AO053_04245;anticodon=(pos:901..903);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_04245;product=tRNA-Met
GCA_005888185.1|LNKP01000042.1	tRNAscan-SE	exon	867	943	.	+	.	ID=exon-AO053_04245-1;Parent=rna-AO053_04245;anticodon=(pos:901..903);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_04245;product=tRNA-Met
GCA_005888185.1|LNKP01000042.1	Genbank	gene	1166	1621	.	+	.	ID=gene-AO053_04250;Name=AO053_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04250
GCA_005888185.1|LNKP01000042.1	Protein Homology	CDS	1166	1621	.	+	0	ID=cds-TMQ38975.1;Parent=gene-AO053_04250;Dbxref=NCBI_GP:TMQ38975.1;Name=TMQ38975.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652912.1;locus_tag=AO053_04250;product=ribosome maturation protein RimP;protein_id=TMQ38975.1;transl_table=11
GCA_005888185.1|LNKP01000042.1	Genbank	gene	1638	3125	.	+	.	ID=gene-AO053_04255;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AO053_04255
GCA_005888185.1|LNKP01000042.1	Protein Homology	CDS	1638	3125	.	+	0	ID=cds-TMQ38976.1;Parent=gene-AO053_04255;Dbxref=NCBI_GP:TMQ38976.1;Name=TMQ38976.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:SwissProt:P43915.1;locus_tag=AO053_04255;product=transcription elongation factor NusA;protein_id=TMQ38976.1;transl_table=11
GCA_005888185.1|LNKP01000042.1	Genbank	gene	3137	5671	.	+	.	ID=gene-AO053_04260;Name=AO053_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04260
GCA_005888185.1|LNKP01000042.1	Protein Homology	CDS	3137	5671	.	+	0	ID=cds-TMQ38977.1;Parent=gene-AO053_04260;Dbxref=NCBI_GP:TMQ38977.1;Name=TMQ38977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525762.1;locus_tag=AO053_04260;product=translation initiation factor IF-2;protein_id=TMQ38977.1;transl_table=11
GCA_005888185.1|LNKP01000042.1	Genbank	gene	5750	8917	.	-	.	ID=gene-AO053_04265;Name=AO053_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04265
GCA_005888185.1|LNKP01000042.1	Protein Homology	CDS	5750	8917	.	-	0	ID=cds-TMQ38978.1;Parent=gene-AO053_04265;Dbxref=NCBI_GP:TMQ38978.1;Name=TMQ38978.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657481.1;locus_tag=AO053_04265;product=restriction endonuclease subunit R;protein_id=TMQ38978.1;transl_table=11
GCA_005888185.1|LNKP01000042.1	Genbank	gene	9195	10508	.	-	.	ID=gene-AO053_04270;Name=AO053_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04270
GCA_005888185.1|LNKP01000042.1	Protein Homology	CDS	9195	10508	.	-	0	ID=cds-TMQ38979.1;Parent=gene-AO053_04270;Dbxref=NCBI_GP:TMQ38979.1;Name=TMQ38979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010589195.1;locus_tag=AO053_04270;product=hypothetical protein;protein_id=TMQ38979.1;transl_table=11
GCA_005888185.1|LNKP01000042.1	Genbank	gene	10501	10941	.	-	.	ID=gene-AO053_04275;Name=AO053_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04275
GCA_005888185.1|LNKP01000042.1	Protein Homology	CDS	10501	10941	.	-	0	ID=cds-TMQ38980.1;Parent=gene-AO053_04275;Dbxref=NCBI_GP:TMQ38980.1;Name=TMQ38980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961912.1;locus_tag=AO053_04275;product=hypothetical protein;protein_id=TMQ38980.1;transl_table=11
##sequence-region LNKP01000043.1 1 5568
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000043.1	Genbank	region	1	5568	.	+	.	ID=LNKP01000043.1:1..5568;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000043.1	Genbank	gene	1	1173	.	-	.	ID=gene-AO053_04280;Name=AO053_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04280;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000043.1	Protein Homology	CDS	1	1173	.	-	0	ID=cds-TMQ38952.1;Parent=gene-AO053_04280;Dbxref=NCBI_GP:TMQ38952.1;Name=TMQ38952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665215.1;locus_tag=AO053_04280;partial=true;product=restriction endonuclease subunit M;protein_id=TMQ38952.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000043.1	Genbank	gene	1408	1794	.	+	.	ID=gene-AO053_04285;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AO053_04285
GCA_005888185.1|LNKP01000043.1	Protein Homology	CDS	1408	1794	.	+	0	ID=cds-TMQ38947.1;Parent=gene-AO053_04285;Dbxref=NCBI_GP:TMQ38947.1;Name=TMQ38947.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK42.1;locus_tag=AO053_04285;product=ribosome-binding factor A;protein_id=TMQ38947.1;transl_table=11
GCA_005888185.1|LNKP01000043.1	Genbank	gene	1794	2714	.	+	.	ID=gene-AO053_04290;Name=AO053_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04290
GCA_005888185.1|LNKP01000043.1	Protein Homology	CDS	1794	2714	.	+	0	ID=cds-TMQ38948.1;Parent=gene-AO053_04290;Dbxref=NCBI_GP:TMQ38948.1;Name=TMQ38948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK43.1;locus_tag=AO053_04290;product=pseudouridine synthase;protein_id=TMQ38948.1;transl_table=11
GCA_005888185.1|LNKP01000043.1	Genbank	gene	2803	3927	.	+	.	ID=gene-AO053_04295;Name=AO053_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04295
GCA_005888185.1|LNKP01000043.1	Protein Homology	CDS	2803	3927	.	+	0	ID=cds-TMQ38949.1;Parent=gene-AO053_04295;Dbxref=NCBI_GP:TMQ38949.1;Name=TMQ38949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995942.1;locus_tag=AO053_04295;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=TMQ38949.1;transl_table=11
GCA_005888185.1|LNKP01000043.1	Genbank	gene	3960	4799	.	-	.	ID=gene-AO053_04300;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=AO053_04300
GCA_005888185.1|LNKP01000043.1	Protein Homology	CDS	3960	4799	.	-	0	ID=cds-TMQ38950.1;Parent=gene-AO053_04300;Dbxref=NCBI_GP:TMQ38950.1;Name=TMQ38950.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665224.1;locus_tag=AO053_04300;product=NADPH-dependent 7-cyano-7-deazaguanine reductase;protein_id=TMQ38950.1;transl_table=11
GCA_005888185.1|LNKP01000043.1	Genbank	gene	4926	5568	.	-	.	ID=gene-AO053_04305;Name=AO053_04305;end_range=5568,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04305;partial=true
GCA_005888185.1|LNKP01000043.1	Protein Homology	CDS	4926	5568	.	-	1	ID=cds-TMQ38951.1;Parent=gene-AO053_04305;Dbxref=NCBI_GP:TMQ38951.1;Name=TMQ38951.1;end_range=5568,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272655.1;locus_tag=AO053_04305;partial=true;product=hypothetical protein;protein_id=TMQ38951.1;transl_table=11
##sequence-region LNKP01000044.1 1 41566
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000044.1	Genbank	region	1	41566	.	+	.	ID=LNKP01000044.1:1..41566;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000044.1	Genbank	pseudogene	1	763	.	-	.	ID=gene-AO053_04310;Name=AO053_04310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04310;pseudo=true
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	1	763	.	-	0	ID=cds-AO053_04310;Parent=gene-AO053_04310;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525648.1;locus_tag=AO053_04310;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	795	1364	.	-	.	ID=gene-AO053_04315;Name=AO053_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04315
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	795	1364	.	-	0	ID=cds-TMQ38881.1;Parent=gene-AO053_04315;Dbxref=NCBI_GP:TMQ38881.1;Name=TMQ38881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658855.1;locus_tag=AO053_04315;product=phage tail protein;protein_id=TMQ38881.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	1357	2463	.	-	.	ID=gene-AO053_04320;Name=AO053_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04320
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	1357	2463	.	-	0	ID=cds-TMQ38882.1;Parent=gene-AO053_04320;Dbxref=NCBI_GP:TMQ38882.1;Name=TMQ38882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658857.1;locus_tag=AO053_04320;product=phage baseplate protein;protein_id=TMQ38882.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	2463	2828	.	-	.	ID=gene-AO053_04325;Name=AO053_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04325
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	2463	2828	.	-	0	ID=cds-TMQ38883.1;Parent=gene-AO053_04325;Dbxref=NCBI_GP:TMQ38883.1;Name=TMQ38883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525650.1;locus_tag=AO053_04325;product=phage baseplate protein;protein_id=TMQ38883.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	2883	3491	.	-	.	ID=gene-AO053_04330;Name=AO053_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04330
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	2883	3491	.	-	0	ID=cds-TMQ38884.1;Parent=gene-AO053_04330;Dbxref=NCBI_GP:TMQ38884.1;Name=TMQ38884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658861.1;locus_tag=AO053_04330;product=phage baseplate protein;protein_id=TMQ38884.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	3478	4542	.	-	.	ID=gene-AO053_04335;Name=AO053_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04335
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	3478	4542	.	-	0	ID=cds-TMQ38885.1;Parent=gene-AO053_04335;Dbxref=NCBI_GP:TMQ38885.1;Name=TMQ38885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533314.1;locus_tag=AO053_04335;product=hypothetical protein;protein_id=TMQ38885.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	4535	4765	.	-	.	ID=gene-AO053_04340;Name=AO053_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04340
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	4535	4765	.	-	0	ID=cds-TMQ38886.1;Parent=gene-AO053_04340;Dbxref=NCBI_GP:TMQ38886.1;Name=TMQ38886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658865.1;locus_tag=AO053_04340;product=hypothetical protein;protein_id=TMQ38886.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	4746	5678	.	-	.	ID=gene-AO053_04345;Name=AO053_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04345
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	4746	5678	.	-	0	ID=cds-TMQ38887.1;Parent=gene-AO053_04345;Dbxref=NCBI_GP:TMQ38887.1;Name=TMQ38887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658868.1;locus_tag=AO053_04345;product=hypothetical protein;protein_id=TMQ38887.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	5678	8269	.	-	.	ID=gene-AO053_04350;Name=AO053_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04350
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	5678	8269	.	-	0	ID=cds-TMQ38888.1;Parent=gene-AO053_04350;Dbxref=NCBI_GP:TMQ38888.1;Name=TMQ38888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525653.1;locus_tag=AO053_04350;product=phage tail tape measure protein;protein_id=TMQ38888.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	8315	8629	.	+	.	ID=gene-AO053_04355;Name=AO053_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04355
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	8315	8629	.	+	0	ID=cds-TMQ38889.1;Parent=gene-AO053_04355;Dbxref=NCBI_GP:TMQ38889.1;Name=TMQ38889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640668.1;locus_tag=AO053_04355;product=hypothetical protein;protein_id=TMQ38889.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	8744	9028	.	-	.	ID=gene-AO053_04360;Name=AO053_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04360
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	8744	9028	.	-	0	ID=cds-TMQ38890.1;Parent=gene-AO053_04360;Dbxref=NCBI_GP:TMQ38890.1;Name=TMQ38890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640664.1;locus_tag=AO053_04360;product=hypothetical protein;protein_id=TMQ38890.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	9122	9640	.	-	.	ID=gene-AO053_04365;Name=AO053_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04365
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	9122	9640	.	-	0	ID=cds-TMQ38891.1;Parent=gene-AO053_04365;Dbxref=NCBI_GP:TMQ38891.1;Name=TMQ38891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664074.1;locus_tag=AO053_04365;product=phage tail protein;protein_id=TMQ38891.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	9651	11036	.	-	.	ID=gene-AO053_04370;Name=AO053_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04370
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	9651	11036	.	-	0	ID=cds-TMQ38892.1;Parent=gene-AO053_04370;Dbxref=NCBI_GP:TMQ38892.1;Name=TMQ38892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533214.1;locus_tag=AO053_04370;product=phage tail protein;protein_id=TMQ38892.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	11046	11543	.	-	.	ID=gene-AO053_04375;Name=AO053_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04375
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	11046	11543	.	-	0	ID=cds-TMQ38893.1;Parent=gene-AO053_04375;Dbxref=NCBI_GP:TMQ38893.1;Name=TMQ38893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658884.1;locus_tag=AO053_04375;product=hypothetical protein;protein_id=TMQ38893.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	11555	11989	.	-	.	ID=gene-AO053_04380;Name=AO053_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04380
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	11555	11989	.	-	0	ID=cds-TMQ38894.1;Parent=gene-AO053_04380;Dbxref=NCBI_GP:TMQ38894.1;Name=TMQ38894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664066.1;locus_tag=AO053_04380;product=hypothetical protein;protein_id=TMQ38894.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	11989	12306	.	-	.	ID=gene-AO053_04385;Name=AO053_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04385
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	11989	12306	.	-	0	ID=cds-TMQ38895.1;Parent=gene-AO053_04385;Dbxref=NCBI_GP:TMQ38895.1;Name=TMQ38895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533211.1;locus_tag=AO053_04385;product=hypothetical protein;protein_id=TMQ38895.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	12372	13298	.	-	.	ID=gene-AO053_04390;Name=AO053_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04390
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	12372	13298	.	-	0	ID=cds-TMQ38896.1;Parent=gene-AO053_04390;Dbxref=NCBI_GP:TMQ38896.1;Name=TMQ38896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525656.1;locus_tag=AO053_04390;product=hypothetical protein;protein_id=TMQ38896.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	13317	14420	.	-	.	ID=gene-AO053_04395;Name=AO053_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04395
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	13317	14420	.	-	0	ID=cds-TMQ38897.1;Parent=gene-AO053_04395;Dbxref=NCBI_GP:TMQ38897.1;Name=TMQ38897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658895.1;locus_tag=AO053_04395;product=peptidase;protein_id=TMQ38897.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	14663	15163	.	-	.	ID=gene-AO053_04400;Name=AO053_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04400
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	14663	15163	.	-	0	ID=cds-TMQ38898.1;Parent=gene-AO053_04400;Dbxref=NCBI_GP:TMQ38898.1;Name=TMQ38898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658896.1;locus_tag=AO053_04400;product=phage morphogenesis protein;protein_id=TMQ38898.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	15366	15554	.	-	.	ID=gene-AO053_04405;Name=AO053_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04405
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	15366	15554	.	-	0	ID=cds-TMQ38899.1;Parent=gene-AO053_04405;Dbxref=NCBI_GP:TMQ38899.1;Name=TMQ38899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658899.1;locus_tag=AO053_04405;product=hypothetical protein;protein_id=TMQ38899.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	15741	17018	.	-	.	ID=gene-AO053_04410;Name=AO053_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04410
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	15741	17018	.	-	0	ID=cds-TMQ38900.1;Parent=gene-AO053_04410;Dbxref=NCBI_GP:TMQ38900.1;Name=TMQ38900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525658.1;locus_tag=AO053_04410;product=phage head morphogenesis protein;protein_id=TMQ38900.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	17019	18434	.	-	.	ID=gene-AO053_04415;Name=AO053_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04415
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	17019	18434	.	-	0	ID=cds-TMQ38901.1;Parent=gene-AO053_04415;Dbxref=NCBI_GP:TMQ38901.1;Name=TMQ38901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525659.1;locus_tag=AO053_04415;product=hypothetical protein;protein_id=TMQ38901.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	18436	19758	.	-	.	ID=gene-AO053_04420;Name=AO053_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04420
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	18436	19758	.	-	0	ID=cds-TMQ38902.1;Parent=gene-AO053_04420;Dbxref=NCBI_GP:TMQ38902.1;Name=TMQ38902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658905.1;locus_tag=AO053_04420;product=terminase;protein_id=TMQ38902.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	19742	20290	.	-	.	ID=gene-AO053_04425;Name=AO053_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04425
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	19742	20290	.	-	0	ID=cds-TMQ38903.1;Parent=gene-AO053_04425;Dbxref=NCBI_GP:TMQ38903.1;Name=TMQ38903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658907.1;locus_tag=AO053_04425;product=terminase;protein_id=TMQ38903.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	20300	20602	.	-	.	ID=gene-AO053_04430;Name=AO053_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04430
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	20300	20602	.	-	0	ID=cds-TMQ38904.1;Parent=gene-AO053_04430;Dbxref=NCBI_GP:TMQ38904.1;Name=TMQ38904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658909.1;locus_tag=AO053_04430;product=hypothetical protein;protein_id=TMQ38904.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	20599	20907	.	-	.	ID=gene-AO053_04435;Name=AO053_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04435
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	20599	20907	.	-	0	ID=cds-TMQ38905.1;Parent=gene-AO053_04435;Dbxref=NCBI_GP:TMQ38905.1;Name=TMQ38905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658911.1;locus_tag=AO053_04435;product=hypothetical protein;protein_id=TMQ38905.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Protein Homology	pseudogene	21031	21287	.	-	.	ID=gene-AO053_04440;Name=AO053_04440;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04440;pseudo=true
GCA_005888185.1|LNKP01000044.1	Genbank	gene	21284	21514	.	-	.	ID=gene-AO053_04445;Name=AO053_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04445
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	21284	21514	.	-	0	ID=cds-TMQ38906.1;Parent=gene-AO053_04445;Dbxref=NCBI_GP:TMQ38906.1;Name=TMQ38906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658916.1;locus_tag=AO053_04445;product=hypothetical protein;protein_id=TMQ38906.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	21754	22290	.	-	.	ID=gene-AO053_04450;Name=AO053_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04450
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	21754	22290	.	-	0	ID=cds-TMQ38907.1;Parent=gene-AO053_04450;Dbxref=NCBI_GP:TMQ38907.1;Name=TMQ38907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661580.1;locus_tag=AO053_04450;product=N-acetylmuramoyl-L-alanine amidase;protein_id=TMQ38907.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	22377	22796	.	-	.	ID=gene-AO053_04455;Name=AO053_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04455
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	22377	22796	.	-	0	ID=cds-TMQ38908.1;Parent=gene-AO053_04455;Dbxref=NCBI_GP:TMQ38908.1;Name=TMQ38908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533301.1;locus_tag=AO053_04455;product=hypothetical protein;protein_id=TMQ38908.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	22870	23244	.	-	.	ID=gene-AO053_04460;Name=AO053_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04460
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	22870	23244	.	-	0	ID=cds-TMQ38927.1;Parent=gene-AO053_04460;Dbxref=NCBI_GP:TMQ38927.1;Name=TMQ38927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658927.1;locus_tag=AO053_04460;product=transcriptional regulator;protein_id=TMQ38927.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	23248	23736	.	-	.	ID=gene-AO053_04465;Name=AO053_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04465
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	23248	23736	.	-	0	ID=cds-TMQ38909.1;Parent=gene-AO053_04465;Dbxref=NCBI_GP:TMQ38909.1;Name=TMQ38909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658929.1;locus_tag=AO053_04465;product=hypothetical protein;protein_id=TMQ38909.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	23846	24133	.	-	.	ID=gene-AO053_04470;Name=AO053_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04470
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	23846	24133	.	-	0	ID=cds-TMQ38910.1;Parent=gene-AO053_04470;Dbxref=NCBI_GP:TMQ38910.1;Name=TMQ38910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668273.1;locus_tag=AO053_04470;product=hypothetical protein;protein_id=TMQ38910.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	24137	24367	.	-	.	ID=gene-AO053_04475;Name=AO053_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04475
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	24137	24367	.	-	0	ID=cds-TMQ38911.1;Parent=gene-AO053_04475;Dbxref=NCBI_GP:TMQ38911.1;Name=TMQ38911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005616871.1;locus_tag=AO053_04475;product=hypothetical protein;protein_id=TMQ38911.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	24368	24742	.	-	.	ID=gene-AO053_04480;Name=AO053_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04480
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	24368	24742	.	-	0	ID=cds-TMQ38912.1;Parent=gene-AO053_04480;Dbxref=NCBI_GP:TMQ38912.1;Name=TMQ38912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525663.1;locus_tag=AO053_04480;product=hypothetical protein;protein_id=TMQ38912.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	24815	25033	.	-	.	ID=gene-AO053_04485;Name=AO053_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04485
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	24815	25033	.	-	0	ID=cds-TMQ38913.1;Parent=gene-AO053_04485;Dbxref=NCBI_GP:TMQ38913.1;Name=TMQ38913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643762.1;locus_tag=AO053_04485;product=hypothetical protein;protein_id=TMQ38913.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	25198	25395	.	-	.	ID=gene-AO053_04490;Name=AO053_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04490
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	25198	25395	.	-	0	ID=cds-TMQ38914.1;Parent=gene-AO053_04490;Dbxref=NCBI_GP:TMQ38914.1;Name=TMQ38914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641531.1;locus_tag=AO053_04490;product=hypothetical protein;protein_id=TMQ38914.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	25500	26018	.	-	.	ID=gene-AO053_04495;Name=AO053_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04495
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	25500	26018	.	-	0	ID=cds-TMQ38915.1;Parent=gene-AO053_04495;Dbxref=NCBI_GP:TMQ38915.1;Name=TMQ38915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660799.1;locus_tag=AO053_04495;product=host-nuclease inhibitor protein Gam;protein_id=TMQ38915.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	26040	26243	.	-	.	ID=gene-AO053_04500;Name=AO053_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04500
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	26040	26243	.	-	0	ID=cds-TMQ38916.1;Parent=gene-AO053_04500;Dbxref=NCBI_GP:TMQ38916.1;Name=TMQ38916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657708.1;locus_tag=AO053_04500;product=hypothetical protein;protein_id=TMQ38916.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Protein Homology	pseudogene	26243	27159	.	-	.	ID=gene-AO053_04505;Name=AO053_04505;Note=disrupted;description=DNA transposition protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04505;pseudo=true
GCA_005888185.1|LNKP01000044.1	Genbank	gene	27186	29195	.	-	.	ID=gene-AO053_04510;Name=AO053_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04510
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	27186	29195	.	-	0	ID=cds-TMQ38917.1;Parent=gene-AO053_04510;Dbxref=NCBI_GP:TMQ38917.1;Name=TMQ38917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525667.1;locus_tag=AO053_04510;product=transposase;protein_id=TMQ38917.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	29206	29433	.	-	.	ID=gene-AO053_04515;Name=AO053_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04515
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	29206	29433	.	-	0	ID=cds-TMQ38918.1;Parent=gene-AO053_04515;Dbxref=NCBI_GP:TMQ38918.1;Name=TMQ38918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657714.1;locus_tag=AO053_04515;product=DNA-binding protein;protein_id=TMQ38918.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	29644	30144	.	+	.	ID=gene-AO053_04520;Name=AO053_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04520
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	29644	30144	.	+	0	ID=cds-TMQ38919.1;Parent=gene-AO053_04520;Dbxref=NCBI_GP:TMQ38919.1;Name=TMQ38919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657715.1;locus_tag=AO053_04520;product=ci repressor-like protein;protein_id=TMQ38919.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	pseudogene	30486	32270	.	+	.	ID=gene-AO053_04525;Name=AO053_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04525;pseudo=true
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	30486	32270	.	+	0	ID=cds-AO053_04525;Parent=gene-AO053_04525;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995786.1;locus_tag=AO053_04525;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	32306	33781	.	-	.	ID=gene-AO053_04530;Name=AO053_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04530
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	32306	33781	.	-	0	ID=cds-TMQ38920.1;Parent=gene-AO053_04530;Dbxref=NCBI_GP:TMQ38920.1;Name=TMQ38920.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702491.1;locus_tag=AO053_04530;product=aminopeptidase;protein_id=TMQ38920.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	33889	34983	.	+	.	ID=gene-AO053_04535;Name=AO053_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04535
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	33889	34983	.	+	0	ID=cds-TMQ38921.1;Parent=gene-AO053_04535;Dbxref=NCBI_GP:TMQ38921.1;Name=TMQ38921.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525669.1;locus_tag=AO053_04535;product=LPS export ABC transporter permease LptF;protein_id=TMQ38921.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	34989	36065	.	+	.	ID=gene-AO053_04540;Name=AO053_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04540
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	34989	36065	.	+	0	ID=cds-TMQ38922.1;Parent=gene-AO053_04540;Dbxref=NCBI_GP:TMQ38922.1;Name=TMQ38922.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661087.1;locus_tag=AO053_04540;product=LPS export ABC transporter permease LptG;protein_id=TMQ38922.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	36259	38529	.	+	.	ID=gene-AO053_04545;Name=AO053_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04545
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	36259	38529	.	+	0	ID=cds-TMQ38923.1;Parent=gene-AO053_04545;Dbxref=NCBI_GP:TMQ38923.1;Name=TMQ38923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499902.1;locus_tag=AO053_04545;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=TMQ38923.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	38750	39493	.	-	.	ID=gene-AO053_04550;Name=AO053_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04550
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	38750	39493	.	-	0	ID=cds-TMQ38924.1;Parent=gene-AO053_04550;Dbxref=NCBI_GP:TMQ38924.1;Name=TMQ38924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702488.1;locus_tag=AO053_04550;product=hypothetical protein;protein_id=TMQ38924.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	39628	40833	.	+	.	ID=gene-AO053_04555;Name=AO053_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04555
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	39628	40833	.	+	0	ID=cds-TMQ38925.1;Parent=gene-AO053_04555;Dbxref=NCBI_GP:TMQ38925.1;Name=TMQ38925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631946.1;locus_tag=AO053_04555;product=Lsg locus protein 1;protein_id=TMQ38925.1;transl_table=11
GCA_005888185.1|LNKP01000044.1	Genbank	gene	40830	41566	.	+	.	ID=gene-AO053_04560;Name=AO053_04560;end_range=41566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04560;partial=true
GCA_005888185.1|LNKP01000044.1	Protein Homology	CDS	40830	41566	.	+	0	ID=cds-TMQ38926.1;Parent=gene-AO053_04560;Dbxref=NCBI_GP:TMQ38926.1;Name=TMQ38926.1;end_range=41566,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649995.1;locus_tag=AO053_04560;partial=true;product=CMP-N-acetylneuraminate-beta-galactosamide-alpha-2%2C 3-sialyltransferase;protein_id=TMQ38926.1;transl_table=11
##sequence-region LNKP01000045.1 1 5020
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000045.1	Genbank	region	1	5020	.	+	.	ID=LNKP01000045.1:1..5020;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000045.1	Genbank	gene	177	1238	.	+	.	ID=gene-AO053_04565;Name=AO053_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04565
GCA_005888185.1|LNKP01000045.1	Protein Homology	CDS	177	1238	.	+	0	ID=cds-TMQ38854.1;Parent=gene-AO053_04565;Dbxref=NCBI_GP:TMQ38854.1;Name=TMQ38854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272754.1;locus_tag=AO053_04565;product=glycosyl transferase family 1;protein_id=TMQ38854.1;transl_table=11
GCA_005888185.1|LNKP01000045.1	Genbank	gene	1250	2023	.	+	.	ID=gene-AO053_04570;Name=AO053_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04570
GCA_005888185.1|LNKP01000045.1	Protein Homology	CDS	1250	2023	.	+	0	ID=cds-TMQ38855.1;Parent=gene-AO053_04570;Dbxref=NCBI_GP:TMQ38855.1;Name=TMQ38855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688021.1;locus_tag=AO053_04570;product=Lsg locus protein 4;protein_id=TMQ38855.1;transl_table=11
GCA_005888185.1|LNKP01000045.1	Genbank	gene	2035	2919	.	+	.	ID=gene-AO053_04575;Name=AO053_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04575
GCA_005888185.1|LNKP01000045.1	Protein Homology	CDS	2035	2919	.	+	0	ID=cds-TMQ38856.1;Parent=gene-AO053_04575;Dbxref=NCBI_GP:TMQ38856.1;Name=TMQ38856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995796.1;locus_tag=AO053_04575;product=glycosyltransferase;protein_id=TMQ38856.1;transl_table=11
GCA_005888185.1|LNKP01000045.1	Genbank	gene	2921	3724	.	+	.	ID=gene-AO053_04580;Name=AO053_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04580
GCA_005888185.1|LNKP01000045.1	Protein Homology	CDS	2921	3724	.	+	0	ID=cds-TMQ38857.1;Parent=gene-AO053_04580;Dbxref=NCBI_GP:TMQ38857.1;Name=TMQ38857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702482.1;locus_tag=AO053_04580;product=amylovoran biosynthesis protein AmsE;protein_id=TMQ38857.1;transl_table=11
GCA_005888185.1|LNKP01000045.1	Genbank	gene	3842	4975	.	+	.	ID=gene-AO053_04585;Name=AO053_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04585
GCA_005888185.1|LNKP01000045.1	Protein Homology	CDS	3842	4975	.	+	0	ID=cds-TMQ38858.1;Parent=gene-AO053_04585;Dbxref=NCBI_GP:TMQ38858.1;Name=TMQ38858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995799.1;locus_tag=AO053_04585;product=hypothetical protein;protein_id=TMQ38858.1;transl_table=11
##sequence-region LNKP01000046.1 1 7589
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000046.1	Genbank	region	1	7589	.	+	.	ID=LNKP01000046.1:1..7589;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000046.1	Genbank	gene	1	1502	.	+	.	ID=gene-AO053_04590;Name=AO053_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04590;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000046.1	Protein Homology	CDS	1	1502	.	+	2	ID=cds-TMQ38830.1;Parent=gene-AO053_04590;Dbxref=NCBI_GP:TMQ38830.1;Name=TMQ38830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527555.1;locus_tag=AO053_04590;partial=true;product=hypothetical protein;protein_id=TMQ38830.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000046.1	Genbank	gene	1549	2157	.	-	.	ID=gene-AO053_04595;Name=AO053_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04595
GCA_005888185.1|LNKP01000046.1	Protein Homology	CDS	1549	2157	.	-	0	ID=cds-TMQ38831.1;Parent=gene-AO053_04595;Dbxref=NCBI_GP:TMQ38831.1;Name=TMQ38831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525675.1;locus_tag=AO053_04595;product=hypothetical protein;protein_id=TMQ38831.1;transl_table=11
GCA_005888185.1|LNKP01000046.1	Genbank	gene	2304	2774	.	-	.	ID=gene-AO053_04600;Name=AO053_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04600
GCA_005888185.1|LNKP01000046.1	Protein Homology	CDS	2304	2774	.	-	0	ID=cds-TMQ38832.1;Parent=gene-AO053_04600;Dbxref=NCBI_GP:TMQ38832.1;Name=TMQ38832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012367281.1;locus_tag=AO053_04600;product=hypothetical protein;protein_id=TMQ38832.1;transl_table=11
GCA_005888185.1|LNKP01000046.1	Genbank	gene	2777	3913	.	-	.	ID=gene-AO053_04605;Name=AO053_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04605
GCA_005888185.1|LNKP01000046.1	Protein Homology	CDS	2777	3913	.	-	0	ID=cds-TMQ38833.1;Parent=gene-AO053_04605;Dbxref=NCBI_GP:TMQ38833.1;Name=TMQ38833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995802.1;locus_tag=AO053_04605;product=hypothetical protein;protein_id=TMQ38833.1;transl_table=11
GCA_005888185.1|LNKP01000046.1	Protein Homology	pseudogene	3917	5129	.	-	.	ID=gene-AO053_04610;Name=AO053_04610;Note=disrupted;description=glycosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04610;pseudo=true
GCA_005888185.1|LNKP01000046.1	Genbank	gene	5133	6275	.	-	.	ID=gene-AO053_04615;Name=AO053_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04615
GCA_005888185.1|LNKP01000046.1	Protein Homology	CDS	5133	6275	.	-	0	ID=cds-TMQ38834.1;Parent=gene-AO053_04615;Dbxref=NCBI_GP:TMQ38834.1;Name=TMQ38834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995804.1;locus_tag=AO053_04615;product=hypothetical protein;protein_id=TMQ38834.1;transl_table=11
GCA_005888185.1|LNKP01000046.1	Genbank	pseudogene	6328	7589	.	-	.	ID=gene-AO053_04620;Name=AO053_04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04620;pseudo=true
GCA_005888185.1|LNKP01000046.1	Protein Homology	CDS	6328	7589	.	-	2	ID=cds-AO053_04620;Parent=gene-AO053_04620;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525732.1;locus_tag=AO053_04620;pseudo=true;transl_table=11
##sequence-region LNKP01000047.1 1 1070
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000047.1	Genbank	region	1	1070	.	+	.	ID=LNKP01000047.1:1..1070;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000047.1	Genbank	pseudogene	1	337	.	+	.	ID=gene-AO053_04625;Name=AO053_04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04625;pseudo=true
GCA_005888185.1|LNKP01000047.1	Protein Homology	CDS	1	337	.	+	1	ID=cds-AO053_04625;Parent=gene-AO053_04625;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272655.1;locus_tag=AO053_04625;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000047.1	Genbank	pseudogene	454	981	.	-	.	ID=gene-AO053_04630;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=AO053_04630;pseudo=true
GCA_005888185.1|LNKP01000047.1	Protein Homology	CDS	454	981	.	-	0	ID=cds-AO053_04630;Parent=gene-AO053_04630;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650412.1;locus_tag=AO053_04630;pseudo=true;transl_table=11
##sequence-region LNKP01000048.1 1 5523
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000048.1	Genbank	region	1	5523	.	+	.	ID=LNKP01000048.1:1..5523;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000048.1	Genbank	gene	32	1177	.	-	.	ID=gene-AO053_04635;Name=AO053_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04635
GCA_005888185.1|LNKP01000048.1	Protein Homology	CDS	32	1177	.	-	0	ID=cds-TMQ38817.1;Parent=gene-AO053_04635;Dbxref=NCBI_GP:TMQ38817.1;Name=TMQ38817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45219.1;locus_tag=AO053_04635;product=cell division protein FtsH;protein_id=TMQ38817.1;transl_table=11
GCA_005888185.1|LNKP01000048.1	Protein Homology	pseudogene	1314	3527	.	+	.	ID=gene-AO053_04640;Name=AO053_04640;Note=disrupted;description=ligand-gated channel protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04640;pseudo=true
GCA_005888185.1|LNKP01000048.1	Genbank	gene	3586	5355	.	+	.	ID=gene-AO053_04645;Name=AO053_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04645
GCA_005888185.1|LNKP01000048.1	Protein Homology	CDS	3586	5355	.	+	0	ID=cds-TMQ38818.1;Parent=gene-AO053_04645;Dbxref=NCBI_GP:TMQ38818.1;Name=TMQ38818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525873.1;locus_tag=AO053_04645;product=ABC transporter ATP-binding protein;protein_id=TMQ38818.1;transl_table=11
##sequence-region LNKP01000049.1 1 28025
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000049.1	Genbank	region	1	28025	.	+	.	ID=LNKP01000049.1:1..28025;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000049.1	Genbank	gene	504	3113	.	+	.	ID=gene-AO053_04650;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=AO053_04650
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	504	3113	.	+	0	ID=cds-TMQ38778.1;Parent=gene-AO053_04650;Dbxref=NCBI_GP:TMQ38778.1;Name=TMQ38778.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702431.1;locus_tag=AO053_04650;product=aminopeptidase N;protein_id=TMQ38778.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	3185	3799	.	-	.	ID=gene-AO053_04655;Name=AO053_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04655
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	3185	3799	.	-	0	ID=cds-TMQ38779.1;Parent=gene-AO053_04655;Dbxref=NCBI_GP:TMQ38779.1;Name=TMQ38779.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525974.1;locus_tag=AO053_04655;product=riboflavin synthase subunit alpha;protein_id=TMQ38779.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	3843	5237	.	+	.	ID=gene-AO053_04660;Name=AO053_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04660
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	3843	5237	.	+	0	ID=cds-TMQ38780.1;Parent=gene-AO053_04660;Dbxref=NCBI_GP:TMQ38780.1;Name=TMQ38780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996443.1;locus_tag=AO053_04660;product=MATE family efflux transporter;protein_id=TMQ38780.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	5246	5962	.	+	.	ID=gene-AO053_04665;Name=AO053_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04665
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	5246	5962	.	+	0	ID=cds-TMQ38781.1;Parent=gene-AO053_04665;Dbxref=NCBI_GP:TMQ38781.1;Name=TMQ38781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693622.1;locus_tag=AO053_04665;product=transcriptional regulator;protein_id=TMQ38781.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	6158	7345	.	+	.	ID=gene-AO053_04670;Name=AO053_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04670
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	6158	7345	.	+	0	ID=cds-TMQ38782.1;Parent=gene-AO053_04670;Dbxref=NCBI_GP:TMQ38782.1;Name=TMQ38782.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996441.1;locus_tag=AO053_04670;product=tyrosine--tRNA ligase;protein_id=TMQ38782.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	7428	8375	.	-	.	ID=gene-AO053_04675;Name=AO053_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04675
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	7428	8375	.	-	0	ID=cds-TMQ38783.1;Parent=gene-AO053_04675;Dbxref=NCBI_GP:TMQ38783.1;Name=TMQ38783.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44328.1;locus_tag=AO053_04675;product=ribose-phosphate pyrophosphokinase;protein_id=TMQ38783.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	8377	9318	.	-	.	ID=gene-AO053_04680;Name=AO053_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04680
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	8377	9318	.	-	0	ID=cds-TMQ38800.1;Parent=gene-AO053_04680;Dbxref=NCBI_GP:TMQ38800.1;Name=TMQ38800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45271.1;locus_tag=AO053_04680;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=TMQ38800.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	9330	9959	.	-	.	ID=gene-AO053_04685;Name=AO053_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04685
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	9330	9959	.	-	0	ID=cds-TMQ38784.1;Parent=gene-AO053_04685;Dbxref=NCBI_GP:TMQ38784.1;Name=TMQ38784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL42.1;locus_tag=AO053_04685;product=outer membrane lipoprotein LolB;protein_id=TMQ38784.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	10022	11272	.	-	.	ID=gene-AO053_04690;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=AO053_04690
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	10022	11272	.	-	0	ID=cds-TMQ38785.1;Parent=gene-AO053_04690;Dbxref=NCBI_GP:TMQ38785.1;Name=TMQ38785.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UJ23.1;locus_tag=AO053_04690;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=TMQ38785.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	11279	11890	.	-	.	ID=gene-AO053_04695;Name=AO053_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04695
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	11279	11890	.	-	0	ID=cds-TMQ38786.1;Parent=gene-AO053_04695;Dbxref=NCBI_GP:TMQ38786.1;Name=TMQ38786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525969.1;locus_tag=AO053_04695;product=hypothetical protein;protein_id=TMQ38786.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Protein Homology	pseudogene	11956	13216	.	-	.	ID=gene-AO053_04700;Name=AO053_04700;Note=disrupted;description=phosphate permease;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04700;pseudo=true
GCA_005888185.1|LNKP01000049.1	Genbank	gene	13241	13921	.	-	.	ID=gene-AO053_04705;Name=AO053_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04705
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	13241	13921	.	-	0	ID=cds-TMQ38787.1;Parent=gene-AO053_04705;Dbxref=NCBI_GP:TMQ38787.1;Name=TMQ38787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44271.1;locus_tag=AO053_04705;product=phosphate transport regulator;protein_id=TMQ38787.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	14129	14584	.	+	.	ID=gene-AO053_04710;Name=AO053_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04710
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	14129	14584	.	+	0	ID=cds-TMQ38788.1;Parent=gene-AO053_04710;Dbxref=NCBI_GP:TMQ38788.1;Name=TMQ38788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005623840.1;locus_tag=AO053_04710;product=hypothetical protein;protein_id=TMQ38788.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	14623	14910	.	+	.	ID=gene-AO053_04715;Name=AO053_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04715
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	14623	14910	.	+	0	ID=cds-TMQ38789.1;Parent=gene-AO053_04715;Dbxref=NCBI_GP:TMQ38789.1;Name=TMQ38789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702423.1;locus_tag=AO053_04715;product=hypothetical protein;protein_id=TMQ38789.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	14970	15893	.	+	.	ID=gene-AO053_04720;Name=AO053_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04720
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	14970	15893	.	+	0	ID=cds-TMQ38790.1;Parent=gene-AO053_04720;Dbxref=NCBI_GP:TMQ38790.1;Name=TMQ38790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44268.2;locus_tag=AO053_04720;product=hypothetical protein;protein_id=TMQ38790.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	15883	16599	.	+	.	ID=gene-AO053_04725;Name=AO053_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04725
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	15883	16599	.	+	0	ID=cds-TMQ38791.1;Parent=gene-AO053_04725;Dbxref=NCBI_GP:TMQ38791.1;Name=TMQ38791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996434.1;locus_tag=AO053_04725;product=hypothetical protein;protein_id=TMQ38791.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	16923	17966	.	+	.	ID=gene-AO053_04730;Name=AO053_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04730
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	16923	17966	.	+	0	ID=cds-TMQ38792.1;Parent=gene-AO053_04730;Dbxref=NCBI_GP:TMQ38792.1;Name=TMQ38792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527754.1;locus_tag=AO053_04730;product=hypothetical protein;protein_id=TMQ38792.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	18089	19465	.	+	.	ID=gene-AO053_04735;Name=AO053_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04735
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	18089	19465	.	+	0	ID=cds-TMQ38793.1;Parent=gene-AO053_04735;Dbxref=NCBI_GP:TMQ38793.1;Name=TMQ38793.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45266.1;locus_tag=AO053_04735;product=DNA repair protein RadA;protein_id=TMQ38793.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	19545	20024	.	+	.	ID=gene-AO053_04740;Name=AO053_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04740
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	19545	20024	.	+	0	ID=cds-TMQ38801.1;Parent=gene-AO053_04740;Dbxref=NCBI_GP:TMQ38801.1;Name=TMQ38801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45265.1;locus_tag=AO053_04740;product=transcriptional regulator;protein_id=TMQ38801.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	20026	22794	.	+	.	ID=gene-AO053_04745;Name=AO053_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04745
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	20026	22794	.	+	0	ID=cds-TMQ38794.1;Parent=gene-AO053_04745;Dbxref=NCBI_GP:TMQ38794.1;Name=TMQ38794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525965.1;locus_tag=AO053_04745;product=cell division protein FtsK;protein_id=TMQ38794.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	22812	23429	.	+	.	ID=gene-AO053_04750;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=AO053_04750
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	22812	23429	.	+	0	ID=cds-TMQ38795.1;Parent=gene-AO053_04750;Dbxref=NCBI_GP:TMQ38795.1;Name=TMQ38795.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626003.1;locus_tag=AO053_04750;product=outer membrane lipoprotein carrier protein LolA;protein_id=TMQ38795.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	23491	24831	.	+	.	ID=gene-AO053_04755;Name=AO053_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04755
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	23491	24831	.	+	0	ID=cds-TMQ38796.1;Parent=gene-AO053_04755;Dbxref=NCBI_GP:TMQ38796.1;Name=TMQ38796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550847.1;locus_tag=AO053_04755;product=recombination factor protein RarA;protein_id=TMQ38796.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	24919	26217	.	-	.	ID=gene-AO053_04760;Name=AO053_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04760
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	24919	26217	.	-	0	ID=cds-TMQ38797.1;Parent=gene-AO053_04760;Dbxref=NCBI_GP:TMQ38797.1;Name=TMQ38797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UJ35.1;locus_tag=AO053_04760;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=TMQ38797.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	26217	27053	.	-	.	ID=gene-AO053_04765;Name=AO053_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04765
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	26217	27053	.	-	0	ID=cds-TMQ38798.1;Parent=gene-AO053_04765;Dbxref=NCBI_GP:TMQ38798.1;Name=TMQ38798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641775.1;locus_tag=AO053_04765;product=formyltetrahydrofolate deformylase;protein_id=TMQ38798.1;transl_table=11
GCA_005888185.1|LNKP01000049.1	Genbank	gene	27123	27527	.	-	.	ID=gene-AO053_04770;Name=AO053_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04770
GCA_005888185.1|LNKP01000049.1	Protein Homology	CDS	27123	27527	.	-	0	ID=cds-TMQ38799.1;Parent=gene-AO053_04770;Dbxref=NCBI_GP:TMQ38799.1;Name=TMQ38799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43841.1;locus_tag=AO053_04770;product=DNA-binding protein H-NS-like protein;protein_id=TMQ38799.1;transl_table=11
##sequence-region LNKP01000050.1 1 15049
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000050.1	Genbank	region	1	15049	.	+	.	ID=LNKP01000050.1:1..15049;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000050.1	Genbank	gene	1	1462	.	+	.	ID=gene-AO053_04775;Name=AO053_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04775;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	1	1462	.	+	1	ID=cds-TMQ38729.1;Parent=gene-AO053_04775;Dbxref=NCBI_GP:TMQ38729.1;Name=TMQ38729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691274.1;locus_tag=AO053_04775;partial=true;product=Na+/H+ antiporter;protein_id=TMQ38729.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	1530	1679	.	+	.	ID=gene-AO053_04780;Name=AO053_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04780
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	1530	1679	.	+	0	ID=cds-TMQ38730.1;Parent=gene-AO053_04780;Dbxref=NCBI_GP:TMQ38730.1;Name=TMQ38730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656916.1;locus_tag=AO053_04780;product=formyltetrahydrofolate deformylase;protein_id=TMQ38730.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	1729	3450	.	+	.	ID=gene-AO053_04785;Name=AO053_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04785
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	1729	3450	.	+	0	ID=cds-TMQ38731.1;Parent=gene-AO053_04785;Dbxref=NCBI_GP:TMQ38731.1;Name=TMQ38731.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665261.1;locus_tag=AO053_04785;product=acetolactate synthase 3 catalytic subunit;protein_id=TMQ38731.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	3450	3941	.	+	.	ID=gene-AO053_04790;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=AO053_04790
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	3450	3941	.	+	0	ID=cds-TMQ38732.1;Parent=gene-AO053_04790;Dbxref=NCBI_GP:TMQ38732.1;Name=TMQ38732.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;inference=EXISTENCE: similar to AA sequence:SwissProt:P45260.1;locus_tag=AO053_04790;product=acetolactate synthase small subunit;protein_id=TMQ38732.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	4235	5968	.	-	.	ID=gene-AO053_04795;Name=AO053_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04795
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	4235	5968	.	-	0	ID=cds-TMQ38733.1;Parent=gene-AO053_04795;Dbxref=NCBI_GP:TMQ38733.1;Name=TMQ38733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL12.1;locus_tag=AO053_04795;product=arginyl-tRNA synthetase;protein_id=TMQ38733.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	6048	6617	.	+	.	ID=gene-AO053_04800;Name=AO053_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04800
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	6048	6617	.	+	0	ID=cds-TMQ38734.1;Parent=gene-AO053_04800;Dbxref=NCBI_GP:TMQ38734.1;Name=TMQ38734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647225.1;locus_tag=AO053_04800;product=hypothetical protein;protein_id=TMQ38734.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	6623	6919	.	+	.	ID=gene-AO053_04805;Name=AO053_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04805
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	6623	6919	.	+	0	ID=cds-TMQ38735.1;Parent=gene-AO053_04805;Dbxref=NCBI_GP:TMQ38735.1;Name=TMQ38735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996418.1;locus_tag=AO053_04805;product=glucose-6-phosphate isomerase;protein_id=TMQ38735.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	6945	7409	.	+	.	ID=gene-AO053_04810;Name=AO053_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04810
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	6945	7409	.	+	0	ID=cds-TMQ38736.1;Parent=gene-AO053_04810;Dbxref=NCBI_GP:TMQ38736.1;Name=TMQ38736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996417.1;locus_tag=AO053_04810;product=hypothetical protein;protein_id=TMQ38736.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	7594	8559	.	-	.	ID=gene-AO053_04815;Name=AO053_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04815
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	7594	8559	.	-	0	ID=cds-TMQ38737.1;Parent=gene-AO053_04815;Dbxref=NCBI_GP:TMQ38737.1;Name=TMQ38737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525961.1;locus_tag=AO053_04815;product=glycosyl transferase family A;protein_id=TMQ38737.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	8877	8975	.	-	.	ID=gene-AO053_04820;Name=AO053_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04820
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	8877	8975	.	-	0	ID=cds-TMQ38738.1;Parent=gene-AO053_04820;Dbxref=NCBI_GP:TMQ38738.1;Name=TMQ38738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653296.1;locus_tag=AO053_04820;product=30S ribosomal protein S15;protein_id=TMQ38738.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	9210	10859	.	-	.	ID=gene-AO053_04825;Name=AO053_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04825
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	9210	10859	.	-	0	ID=cds-TMQ38739.1;Parent=gene-AO053_04825;Dbxref=NCBI_GP:TMQ38739.1;Name=TMQ38739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702411.1;locus_tag=AO053_04825;product=glucose-6-phosphate isomerase;protein_id=TMQ38739.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	10956	12038	.	-	.	ID=gene-AO053_04830;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AO053_04830
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	10956	12038	.	-	0	ID=cds-TMQ38740.1;Parent=gene-AO053_04830;Dbxref=NCBI_GP:TMQ38740.1;Name=TMQ38740.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550843.1;locus_tag=AO053_04830;product=alanine racemase;protein_id=TMQ38740.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	12048	13454	.	-	.	ID=gene-AO053_04835;Name=AO053_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04835
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	12048	13454	.	-	0	ID=cds-TMQ38741.1;Parent=gene-AO053_04835;Dbxref=NCBI_GP:TMQ38741.1;Name=TMQ38741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45256.2;locus_tag=AO053_04835;product=replicative DNA helicase;protein_id=TMQ38741.1;transl_table=11
GCA_005888185.1|LNKP01000050.1	Genbank	gene	13596	15032	.	-	.	ID=gene-AO053_04840;Name=AO053_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04840
GCA_005888185.1|LNKP01000050.1	Protein Homology	CDS	13596	15032	.	-	0	ID=cds-TMQ38742.1;Parent=gene-AO053_04840;Dbxref=NCBI_GP:TMQ38742.1;Name=TMQ38742.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996412.1;locus_tag=AO053_04840;product=pyruvate kinase;protein_id=TMQ38742.1;transl_table=11
##sequence-region LNKP01000051.1 1 2904
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000051.1	Genbank	region	1	2904	.	+	.	ID=LNKP01000051.1:1..2904;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000051.1	Genbank	gene	208	284	.	+	.	ID=gene-AO053_04845;Name=AO053_04845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_04845
GCA_005888185.1|LNKP01000051.1	tRNAscan-SE	tRNA	208	284	.	+	.	ID=rna-AO053_04845;Parent=gene-AO053_04845;anticodon=(pos:242..244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_04845;product=tRNA-Val
GCA_005888185.1|LNKP01000051.1	tRNAscan-SE	exon	208	284	.	+	.	ID=exon-AO053_04845-1;Parent=rna-AO053_04845;anticodon=(pos:242..244);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_04845;product=tRNA-Val
GCA_005888185.1|LNKP01000051.1	Genbank	gene	526	1773	.	+	.	ID=gene-AO053_04850;Name=AO053_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04850
GCA_005888185.1|LNKP01000051.1	Protein Homology	CDS	526	1773	.	+	0	ID=cds-TMQ38705.1;Parent=gene-AO053_04850;Dbxref=NCBI_GP:TMQ38705.1;Name=TMQ38705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647201.1;locus_tag=AO053_04850;product=preprotein translocase;protein_id=TMQ38705.1;transl_table=11
GCA_005888185.1|LNKP01000051.1	Genbank	gene	1770	1970	.	-	.	ID=gene-AO053_04855;Name=AO053_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04855
GCA_005888185.1|LNKP01000051.1	Protein Homology	CDS	1770	1970	.	-	0	ID=cds-TMQ38706.1;Parent=gene-AO053_04855;Dbxref=NCBI_GP:TMQ38706.1;Name=TMQ38706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661499.1;locus_tag=AO053_04855;product=transcriptional regulator;protein_id=TMQ38706.1;transl_table=11
GCA_005888185.1|LNKP01000051.1	Genbank	gene	2209	2904	.	-	.	ID=gene-AO053_04860;Name=AO053_04860;end_range=2904,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04860;partial=true
GCA_005888185.1|LNKP01000051.1	Protein Homology	CDS	2209	2904	.	-	0	ID=cds-TMQ38707.1;Parent=gene-AO053_04860;Dbxref=NCBI_GP:TMQ38707.1;Name=TMQ38707.1;end_range=2904,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525955.1;locus_tag=AO053_04860;partial=true;product=antirepressor;protein_id=TMQ38707.1;transl_table=11
##sequence-region LNKP01000052.1 1 1713
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000052.1	Genbank	region	1	1713	.	+	.	ID=LNKP01000052.1:1..1713;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000052.1	Genbank	pseudogene	1	153	.	-	.	ID=gene-AO053_04865;Name=AO053_04865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04865;pseudo=true
GCA_005888185.1|LNKP01000052.1	Protein Homology	CDS	1	153	.	-	0	ID=cds-AO053_04865;Parent=gene-AO053_04865;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525955.1;locus_tag=AO053_04865;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000052.1	Genbank	gene	484	837	.	-	.	ID=gene-AO053_04870;Name=AO053_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04870
GCA_005888185.1|LNKP01000052.1	Protein Homology	CDS	484	837	.	-	0	ID=cds-TMQ38698.1;Parent=gene-AO053_04870;Dbxref=NCBI_GP:TMQ38698.1;Name=TMQ38698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996405.1;locus_tag=AO053_04870;product=hypothetical protein;protein_id=TMQ38698.1;transl_table=11
GCA_005888185.1|LNKP01000052.1	Genbank	gene	824	1264	.	-	.	ID=gene-AO053_04875;Name=AO053_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04875
GCA_005888185.1|LNKP01000052.1	Protein Homology	CDS	824	1264	.	-	0	ID=cds-TMQ38699.1;Parent=gene-AO053_04875;Dbxref=NCBI_GP:TMQ38699.1;Name=TMQ38699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005684834.1;locus_tag=AO053_04875;product=hypothetical protein;protein_id=TMQ38699.1;transl_table=11
GCA_005888185.1|LNKP01000052.1	Genbank	gene	1408	1710	.	-	.	ID=gene-AO053_04880;Name=AO053_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04880
GCA_005888185.1|LNKP01000052.1	Protein Homology	CDS	1408	1710	.	-	0	ID=cds-TMQ38700.1;Parent=gene-AO053_04880;Dbxref=NCBI_GP:TMQ38700.1;Name=TMQ38700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525953.1;locus_tag=AO053_04880;product=hypothetical protein;protein_id=TMQ38700.1;transl_table=11
##sequence-region LNKP01000053.1 1 3336
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000053.1	Genbank	region	1	3336	.	+	.	ID=LNKP01000053.1:1..3336;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000053.1	Genbank	gene	19	255	.	-	.	ID=gene-AO053_04885;Name=AO053_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04885
GCA_005888185.1|LNKP01000053.1	Protein Homology	CDS	19	255	.	-	0	ID=cds-TMQ38688.1;Parent=gene-AO053_04885;Dbxref=NCBI_GP:TMQ38688.1;Name=TMQ38688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652247.1;locus_tag=AO053_04885;product=hypothetical protein;protein_id=TMQ38688.1;transl_table=11
GCA_005888185.1|LNKP01000053.1	Genbank	gene	576	755	.	+	.	ID=gene-AO053_04890;Name=AO053_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04890
GCA_005888185.1|LNKP01000053.1	Protein Homology	CDS	576	755	.	+	0	ID=cds-TMQ38689.1;Parent=gene-AO053_04890;Dbxref=NCBI_GP:TMQ38689.1;Name=TMQ38689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652248.1;locus_tag=AO053_04890;product=hypothetical protein;protein_id=TMQ38689.1;transl_table=11
GCA_005888185.1|LNKP01000053.1	Genbank	gene	815	1249	.	-	.	ID=gene-AO053_04895;Name=AO053_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04895
GCA_005888185.1|LNKP01000053.1	Protein Homology	CDS	815	1249	.	-	0	ID=cds-TMQ38690.1;Parent=gene-AO053_04895;Dbxref=NCBI_GP:TMQ38690.1;Name=TMQ38690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668705.1;locus_tag=AO053_04895;product=single-stranded DNA-binding protein;protein_id=TMQ38690.1;transl_table=11
GCA_005888185.1|LNKP01000053.1	Genbank	gene	1249	1893	.	-	.	ID=gene-AO053_04900;Name=AO053_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04900
GCA_005888185.1|LNKP01000053.1	Protein Homology	CDS	1249	1893	.	-	0	ID=cds-TMQ38691.1;Parent=gene-AO053_04900;Dbxref=NCBI_GP:TMQ38691.1;Name=TMQ38691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525951.1;locus_tag=AO053_04900;product=translocation protein TolB precursor;protein_id=TMQ38691.1;transl_table=11
GCA_005888185.1|LNKP01000053.1	Genbank	gene	2102	2785	.	-	.	ID=gene-AO053_04905;Name=AO053_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04905
GCA_005888185.1|LNKP01000053.1	Protein Homology	CDS	2102	2785	.	-	0	ID=cds-TMQ38692.1;Parent=gene-AO053_04905;Dbxref=NCBI_GP:TMQ38692.1;Name=TMQ38692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525950.1;locus_tag=AO053_04905;product=bacteriocin;protein_id=TMQ38692.1;transl_table=11
##sequence-region LNKP01000054.1 1 12862
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000054.1	Genbank	region	1	12862	.	+	.	ID=LNKP01000054.1:1..12862;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000054.1	Genbank	gene	376	888	.	-	.	ID=gene-AO053_04910;Name=AO053_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04910
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	376	888	.	-	0	ID=cds-TMQ38639.1;Parent=gene-AO053_04910;Dbxref=NCBI_GP:TMQ38639.1;Name=TMQ38639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525949.1;locus_tag=AO053_04910;product=hypothetical protein;protein_id=TMQ38639.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	1105	1911	.	-	.	ID=gene-AO053_04915;Name=AO053_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04915
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	1105	1911	.	-	0	ID=cds-TMQ38640.1;Parent=gene-AO053_04915;Dbxref=NCBI_GP:TMQ38640.1;Name=TMQ38640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641711.1;locus_tag=AO053_04915;product=hypothetical protein;protein_id=TMQ38640.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	2437	2616	.	-	.	ID=gene-AO053_04920;Name=AO053_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04920
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	2437	2616	.	-	0	ID=cds-TMQ38641.1;Parent=gene-AO053_04920;Dbxref=NCBI_GP:TMQ38641.1;Name=TMQ38641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213617.1;locus_tag=AO053_04920;product=hypothetical protein;protein_id=TMQ38641.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	2747	3691	.	-	.	ID=gene-AO053_04925;Name=AO053_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04925
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	2747	3691	.	-	0	ID=cds-TMQ38642.1;Parent=gene-AO053_04925;Dbxref=NCBI_GP:TMQ38642.1;Name=TMQ38642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525947.1;locus_tag=AO053_04925;product=recombinase;protein_id=TMQ38642.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	3704	3997	.	-	.	ID=gene-AO053_04930;Name=AO053_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04930
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	3704	3997	.	-	0	ID=cds-TMQ38643.1;Parent=gene-AO053_04930;Dbxref=NCBI_GP:TMQ38643.1;Name=TMQ38643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692614.1;locus_tag=AO053_04930;product=hypothetical protein;protein_id=TMQ38643.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	3994	4341	.	-	.	ID=gene-AO053_04935;Name=AO053_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04935
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	3994	4341	.	-	0	ID=cds-TMQ38644.1;Parent=gene-AO053_04935;Dbxref=NCBI_GP:TMQ38644.1;Name=TMQ38644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525945.1;locus_tag=AO053_04935;product=hypothetical protein;protein_id=TMQ38644.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	4425	5063	.	-	.	ID=gene-AO053_04940;Name=AO053_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04940
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	4425	5063	.	-	0	ID=cds-TMQ38645.1;Parent=gene-AO053_04940;Dbxref=NCBI_GP:TMQ38645.1;Name=TMQ38645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525944.1;locus_tag=AO053_04940;product=bacteriocin;protein_id=TMQ38645.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	5373	5465	.	-	.	ID=gene-AO053_04945;Name=AO053_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04945
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	5373	5465	.	-	0	ID=cds-TMQ38646.1;Parent=gene-AO053_04945;Dbxref=NCBI_GP:TMQ38646.1;Name=TMQ38646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652700.1;locus_tag=AO053_04945;product=transcriptional regulator;protein_id=TMQ38646.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Protein Homology	pseudogene	5470	5960	.	-	.	ID=gene-AO053_04950;Name=AO053_04950;Note=disrupted;description=helicase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_04950;pseudo=true
GCA_005888185.1|LNKP01000054.1	Genbank	gene	6837	7781	.	-	.	ID=gene-AO053_04955;Name=AO053_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04955
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	6837	7781	.	-	0	ID=cds-TMQ38647.1;Parent=gene-AO053_04955;Dbxref=NCBI_GP:TMQ38647.1;Name=TMQ38647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010246556.1;locus_tag=AO053_04955;product=hypothetical protein;protein_id=TMQ38647.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	7913	8605	.	-	.	ID=gene-AO053_04960;Name=AO053_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04960
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	7913	8605	.	-	0	ID=cds-TMQ38648.1;Parent=gene-AO053_04960;Dbxref=NCBI_GP:TMQ38648.1;Name=TMQ38648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525942.1;locus_tag=AO053_04960;product=hypothetical protein;protein_id=TMQ38648.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	8747	8959	.	+	.	ID=gene-AO053_04965;Name=AO053_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04965
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	8747	8959	.	+	0	ID=cds-TMQ38656.1;Parent=gene-AO053_04965;Dbxref=NCBI_GP:TMQ38656.1;Name=TMQ38656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017807416.1;locus_tag=AO053_04965;product=antirepressor;protein_id=TMQ38656.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	8980	9276	.	+	.	ID=gene-AO053_04970;Name=AO053_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04970
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	8980	9276	.	+	0	ID=cds-TMQ38649.1;Parent=gene-AO053_04970;Dbxref=NCBI_GP:TMQ38649.1;Name=TMQ38649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687168.1;locus_tag=AO053_04970;product=hypothetical protein;protein_id=TMQ38649.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	9324	9992	.	+	.	ID=gene-AO053_04975;Name=AO053_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04975
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	9324	9992	.	+	0	ID=cds-TMQ38650.1;Parent=gene-AO053_04975;Dbxref=NCBI_GP:TMQ38650.1;Name=TMQ38650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996396.1;locus_tag=AO053_04975;product=antirepressor;protein_id=TMQ38650.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	9989	10747	.	+	.	ID=gene-AO053_04980;Name=AO053_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04980
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	9989	10747	.	+	0	ID=cds-TMQ38651.1;Parent=gene-AO053_04980;Dbxref=NCBI_GP:TMQ38651.1;Name=TMQ38651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656659.1;locus_tag=AO053_04980;product=DNA-binding protein;protein_id=TMQ38651.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	10732	11373	.	+	.	ID=gene-AO053_04985;Name=AO053_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04985
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	10732	11373	.	+	0	ID=cds-TMQ38652.1;Parent=gene-AO053_04985;Dbxref=NCBI_GP:TMQ38652.1;Name=TMQ38652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272502.1;locus_tag=AO053_04985;product=replication P;protein_id=TMQ38652.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	11370	11594	.	+	.	ID=gene-AO053_04990;Name=AO053_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04990
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	11370	11594	.	+	0	ID=cds-TMQ38653.1;Parent=gene-AO053_04990;Dbxref=NCBI_GP:TMQ38653.1;Name=TMQ38653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688841.1;locus_tag=AO053_04990;product=hypothetical protein;protein_id=TMQ38653.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	11631	12047	.	+	.	ID=gene-AO053_04995;Name=AO053_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_04995
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	11631	12047	.	+	0	ID=cds-TMQ38654.1;Parent=gene-AO053_04995;Dbxref=NCBI_GP:TMQ38654.1;Name=TMQ38654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272609.1;locus_tag=AO053_04995;product=recombinase;protein_id=TMQ38654.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	gene	12140	12682	.	+	.	ID=gene-AO053_05000;Name=AO053_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05000
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	12140	12682	.	+	0	ID=cds-TMQ38655.1;Parent=gene-AO053_05000;Dbxref=NCBI_GP:TMQ38655.1;Name=TMQ38655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668550.1;locus_tag=AO053_05000;product=NinG recombination protein;protein_id=TMQ38655.1;transl_table=11
GCA_005888185.1|LNKP01000054.1	Genbank	pseudogene	12679	12862	.	+	.	ID=gene-AO053_05005;Name=AO053_05005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05005;pseudo=true
GCA_005888185.1|LNKP01000054.1	Protein Homology	CDS	12679	12862	.	+	0	ID=cds-AO053_05005;Parent=gene-AO053_05005;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672911.1;locus_tag=AO053_05005;pseudo=true;transl_table=11
##sequence-region LNKP01000055.1 1 26332
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000055.1	Genbank	region	1	26332	.	+	.	ID=LNKP01000055.1:1..26332;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000055.1	Genbank	gene	1	185	.	+	.	ID=gene-AO053_05010;Name=AO053_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05010;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	1	185	.	+	2	ID=cds-TMQ38569.1;Parent=gene-AO053_05010;Dbxref=NCBI_GP:TMQ38569.1;Name=TMQ38569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272612.1;locus_tag=AO053_05010;partial=true;product=hypothetical protein;protein_id=TMQ38569.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	285	467	.	+	.	ID=gene-AO053_05015;Name=AO053_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05015
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	285	467	.	+	0	ID=cds-TMQ38570.1;Parent=gene-AO053_05015;Dbxref=NCBI_GP:TMQ38570.1;Name=TMQ38570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653907.1;locus_tag=AO053_05015;product=toxin HicA;protein_id=TMQ38570.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	499	948	.	+	.	ID=gene-AO053_05020;Name=AO053_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05020
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	499	948	.	+	0	ID=cds-TMQ38571.1;Parent=gene-AO053_05020;Dbxref=NCBI_GP:TMQ38571.1;Name=TMQ38571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996391.1;locus_tag=AO053_05020;product=CopG family transcriptional regulator;protein_id=TMQ38571.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	993	1175	.	-	.	ID=gene-AO053_05025;Name=AO053_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05025
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	993	1175	.	-	0	ID=cds-TMQ38572.1;Parent=gene-AO053_05025;Dbxref=NCBI_GP:TMQ38572.1;Name=TMQ38572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653913.1;locus_tag=AO053_05025;product=hypothetical protein;protein_id=TMQ38572.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	1813	2712	.	+	.	ID=gene-AO053_05030;Name=AO053_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05030
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	1813	2712	.	+	0	ID=cds-TMQ38573.1;Parent=gene-AO053_05030;Dbxref=NCBI_GP:TMQ38573.1;Name=TMQ38573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525936.1;locus_tag=AO053_05030;product=antirepressor;protein_id=TMQ38573.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	3561	3634	.	+	.	ID=gene-AO053_05035;Name=AO053_05035;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_05035
GCA_005888185.1|LNKP01000055.1	tRNAscan-SE	tRNA	3561	3634	.	+	.	ID=rna-AO053_05035;Parent=gene-AO053_05035;anticodon=(pos:3593..3595);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_05035;product=tRNA-Trp
GCA_005888185.1|LNKP01000055.1	tRNAscan-SE	exon	3561	3634	.	+	.	ID=exon-AO053_05035-1;Parent=rna-AO053_05035;anticodon=(pos:3593..3595);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_05035;product=tRNA-Trp
GCA_005888185.1|LNKP01000055.1	Genbank	gene	3699	4055	.	+	.	ID=gene-AO053_05040;Name=AO053_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05040
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	3699	4055	.	+	0	ID=cds-TMQ38574.1;Parent=gene-AO053_05040;Dbxref=NCBI_GP:TMQ38574.1;Name=TMQ38574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525935.1;locus_tag=AO053_05040;product=hypothetical protein;protein_id=TMQ38574.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	4024	4626	.	+	.	ID=gene-AO053_05045;Name=AO053_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05045
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	4024	4626	.	+	0	ID=cds-TMQ38575.1;Parent=gene-AO053_05045;Dbxref=NCBI_GP:TMQ38575.1;Name=TMQ38575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44187.1;locus_tag=AO053_05045;product=hypothetical protein;protein_id=TMQ38575.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	4619	4942	.	+	.	ID=gene-AO053_05050;Name=AO053_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05050
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	4619	4942	.	+	0	ID=cds-TMQ38576.1;Parent=gene-AO053_05050;Dbxref=NCBI_GP:TMQ38576.1;Name=TMQ38576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272617.1;locus_tag=AO053_05050;product=hypothetical protein;protein_id=TMQ38576.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	4854	5135	.	+	.	ID=gene-AO053_05055;Name=AO053_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05055
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	4854	5135	.	+	0	ID=cds-TMQ38577.1;Parent=gene-AO053_05055;Dbxref=NCBI_GP:TMQ38577.1;Name=TMQ38577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44185.1;locus_tag=AO053_05055;product=hypothetical protein;protein_id=TMQ38577.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	5137	5484	.	-	.	ID=gene-AO053_05060;Name=AO053_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05060
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	5137	5484	.	-	0	ID=cds-TMQ38578.1;Parent=gene-AO053_05060;Dbxref=NCBI_GP:TMQ38578.1;Name=TMQ38578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702293.1;locus_tag=AO053_05060;product=DNA-binding protein;protein_id=TMQ38578.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	5782	6297	.	+	.	ID=gene-AO053_05065;Name=AO053_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05065
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	5782	6297	.	+	0	ID=cds-TMQ38579.1;Parent=gene-AO053_05065;Dbxref=NCBI_GP:TMQ38579.1;Name=TMQ38579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57374.1;locus_tag=AO053_05065;product=hypothetical protein;protein_id=TMQ38579.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	6284	7627	.	+	.	ID=gene-AO053_05070;Name=AO053_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05070
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	6284	7627	.	+	0	ID=cds-TMQ38580.1;Parent=gene-AO053_05070;Dbxref=NCBI_GP:TMQ38580.1;Name=TMQ38580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702291.1;locus_tag=AO053_05070;product=terminase;protein_id=TMQ38580.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	7629	8960	.	+	.	ID=gene-AO053_05075;Name=AO053_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05075
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	7629	8960	.	+	0	ID=cds-TMQ38581.1;Parent=gene-AO053_05075;Dbxref=NCBI_GP:TMQ38581.1;Name=TMQ38581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527745.1;locus_tag=AO053_05075;product=hypothetical protein;protein_id=TMQ38581.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	pseudogene	9274	9663	.	+	.	ID=gene-AO053_05080;Name=AO053_05080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05080;pseudo=true
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	9274	9663	.	+	0	ID=cds-AO053_05080;Parent=gene-AO053_05080;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996381.1;locus_tag=AO053_05080;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	9718	10422	.	+	.	ID=gene-AO053_05085;Name=AO053_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05085
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	9718	10422	.	+	0	ID=cds-TMQ38602.1;Parent=gene-AO053_05085;Dbxref=NCBI_GP:TMQ38602.1;Name=TMQ38602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005825273.1;locus_tag=AO053_05085;product=recombinase;protein_id=TMQ38602.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	10701	11057	.	+	.	ID=gene-AO053_05090;Name=AO053_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05090
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	10701	11057	.	+	0	ID=cds-TMQ38582.1;Parent=gene-AO053_05090;Dbxref=NCBI_GP:TMQ38582.1;Name=TMQ38582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44181.1;locus_tag=AO053_05090;product=hypothetical protein;protein_id=TMQ38582.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	11119	12219	.	+	.	ID=gene-AO053_05095;Name=AO053_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05095
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	11119	12219	.	+	0	ID=cds-TMQ38583.1;Parent=gene-AO053_05095;Dbxref=NCBI_GP:TMQ38583.1;Name=TMQ38583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996379.1;locus_tag=AO053_05095;product=hypothetical protein;protein_id=TMQ38583.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	12232	12672	.	+	.	ID=gene-AO053_05100;Name=AO053_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05100
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	12232	12672	.	+	0	ID=cds-TMQ38584.1;Parent=gene-AO053_05100;Dbxref=NCBI_GP:TMQ38584.1;Name=TMQ38584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702287.1;locus_tag=AO053_05100;product=hypothetical protein;protein_id=TMQ38584.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	12682	13596	.	+	.	ID=gene-AO053_05105;Name=AO053_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05105
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	12682	13596	.	+	0	ID=cds-TMQ38585.1;Parent=gene-AO053_05105;Dbxref=NCBI_GP:TMQ38585.1;Name=TMQ38585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005579235.1;locus_tag=AO053_05105;product=hypothetical protein;protein_id=TMQ38585.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	13606	13968	.	+	.	ID=gene-AO053_05110;Name=AO053_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05110
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	13606	13968	.	+	0	ID=cds-TMQ38586.1;Parent=gene-AO053_05110;Dbxref=NCBI_GP:TMQ38586.1;Name=TMQ38586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996376.1;locus_tag=AO053_05110;product=hypothetical protein;protein_id=TMQ38586.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	13969	14415	.	+	.	ID=gene-AO053_05115;Name=AO053_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05115
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	13969	14415	.	+	0	ID=cds-TMQ38587.1;Parent=gene-AO053_05115;Dbxref=NCBI_GP:TMQ38587.1;Name=TMQ38587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996375.1;locus_tag=AO053_05115;product=hypothetical protein;protein_id=TMQ38587.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	14412	14783	.	+	.	ID=gene-AO053_05120;Name=AO053_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05120
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	14412	14783	.	+	0	ID=cds-TMQ38588.1;Parent=gene-AO053_05120;Dbxref=NCBI_GP:TMQ38588.1;Name=TMQ38588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996374.1;locus_tag=AO053_05120;product=hypothetical protein;protein_id=TMQ38588.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	14848	15210	.	+	.	ID=gene-AO053_05125;Name=AO053_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05125
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	14848	15210	.	+	0	ID=cds-TMQ38589.1;Parent=gene-AO053_05125;Dbxref=NCBI_GP:TMQ38589.1;Name=TMQ38589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525927.1;locus_tag=AO053_05125;product=hypothetical protein;protein_id=TMQ38589.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	15215	16723	.	+	.	ID=gene-AO053_05130;Name=AO053_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05130
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	15215	16723	.	+	0	ID=cds-TMQ38590.1;Parent=gene-AO053_05130;Dbxref=NCBI_GP:TMQ38590.1;Name=TMQ38590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654620.1;locus_tag=AO053_05130;product=hypothetical protein;protein_id=TMQ38590.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	16968	17399	.	+	.	ID=gene-AO053_05135;Name=AO053_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05135
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	16968	17399	.	+	0	ID=cds-TMQ38591.1;Parent=gene-AO053_05135;Dbxref=NCBI_GP:TMQ38591.1;Name=TMQ38591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578492.1;locus_tag=AO053_05135;product=hypothetical protein;protein_id=TMQ38591.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	17399	17809	.	+	.	ID=gene-AO053_05140;Name=AO053_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05140
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	17399	17809	.	+	0	ID=cds-TMQ38592.1;Parent=gene-AO053_05140;Dbxref=NCBI_GP:TMQ38592.1;Name=TMQ38592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702279.1;locus_tag=AO053_05140;product=hypothetical protein;protein_id=TMQ38592.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	17960	20050	.	+	.	ID=gene-AO053_05145;Name=AO053_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05145
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	17960	20050	.	+	0	ID=cds-TMQ38593.1;Parent=gene-AO053_05145;Dbxref=NCBI_GP:TMQ38593.1;Name=TMQ38593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702278.1;locus_tag=AO053_05145;product=tail length tape measure protein;protein_id=TMQ38593.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	20056	20832	.	+	.	ID=gene-AO053_05150;Name=AO053_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05150
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	20056	20832	.	+	0	ID=cds-TMQ38594.1;Parent=gene-AO053_05150;Dbxref=NCBI_GP:TMQ38594.1;Name=TMQ38594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702277.1;locus_tag=AO053_05150;product=hypothetical protein;protein_id=TMQ38594.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	20838	21146	.	+	.	ID=gene-AO053_05155;Name=AO053_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05155
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	20838	21146	.	+	0	ID=cds-TMQ38603.1;Parent=gene-AO053_05155;Dbxref=NCBI_GP:TMQ38603.1;Name=TMQ38603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525922.1;locus_tag=AO053_05155;product=hypothetical protein;protein_id=TMQ38603.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	21229	21408	.	+	.	ID=gene-AO053_05160;Name=AO053_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05160
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	21229	21408	.	+	0	ID=cds-TMQ38595.1;Parent=gene-AO053_05160;Dbxref=NCBI_GP:TMQ38595.1;Name=TMQ38595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005572280.1;locus_tag=AO053_05160;product=hypothetical protein;protein_id=TMQ38595.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	21423	22295	.	+	.	ID=gene-AO053_05165;Name=AO053_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05165
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	21423	22295	.	+	0	ID=cds-TMQ38596.1;Parent=gene-AO053_05165;Dbxref=NCBI_GP:TMQ38596.1;Name=TMQ38596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702276.1;locus_tag=AO053_05165;product=hypothetical protein;protein_id=TMQ38596.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	22292	22936	.	+	.	ID=gene-AO053_05170;Name=AO053_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05170
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	22292	22936	.	+	0	ID=cds-TMQ38597.1;Parent=gene-AO053_05170;Dbxref=NCBI_GP:TMQ38597.1;Name=TMQ38597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702275.1;locus_tag=AO053_05170;product=baseplate protein;protein_id=TMQ38597.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	22933	23286	.	+	.	ID=gene-AO053_05175;Name=AO053_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05175
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	22933	23286	.	+	0	ID=cds-TMQ38598.1;Parent=gene-AO053_05175;Dbxref=NCBI_GP:TMQ38598.1;Name=TMQ38598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525919.1;locus_tag=AO053_05175;product=hypothetical protein;protein_id=TMQ38598.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	23471	23989	.	+	.	ID=gene-AO053_05180;Name=AO053_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05180
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	23471	23989	.	+	0	ID=cds-TMQ38599.1;Parent=gene-AO053_05180;Dbxref=NCBI_GP:TMQ38599.1;Name=TMQ38599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525918.1;locus_tag=AO053_05180;product=antirepressor;protein_id=TMQ38599.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	24032	25174	.	+	.	ID=gene-AO053_05185;Name=AO053_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05185
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	24032	25174	.	+	0	ID=cds-TMQ38600.1;Parent=gene-AO053_05185;Dbxref=NCBI_GP:TMQ38600.1;Name=TMQ38600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996361.1;locus_tag=AO053_05185;product=hypothetical protein;protein_id=TMQ38600.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	gene	25174	25749	.	+	.	ID=gene-AO053_05190;Name=AO053_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05190
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	25174	25749	.	+	0	ID=cds-TMQ38601.1;Parent=gene-AO053_05190;Dbxref=NCBI_GP:TMQ38601.1;Name=TMQ38601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702271.1;locus_tag=AO053_05190;product=hypothetical protein;protein_id=TMQ38601.1;transl_table=11
GCA_005888185.1|LNKP01000055.1	Genbank	pseudogene	26080	26332	.	+	.	ID=gene-AO053_05195;Name=AO053_05195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05195;pseudo=true
GCA_005888185.1|LNKP01000055.1	Protein Homology	CDS	26080	26332	.	+	0	ID=cds-AO053_05195;Parent=gene-AO053_05195;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44178.1;locus_tag=AO053_05195;pseudo=true;transl_table=11
##sequence-region LNKP01000056.1 1 352
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000056.1	Genbank	region	1	352	.	+	.	ID=LNKP01000056.1:1..352;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
##sequence-region LNKP01000057.1 1 22873
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000057.1	Genbank	region	1	22873	.	+	.	ID=LNKP01000057.1:1..22873;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000057.1	Genbank	gene	1	230	.	+	.	ID=gene-AO053_05200;Name=AO053_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05200;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000057.1	GeneMarkS+	CDS	1	230	.	+	2	ID=cds-TMQ38505.1;Parent=gene-AO053_05200;Dbxref=NCBI_GP:TMQ38505.1;Name=TMQ38505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_05200;partial=true;product=hypothetical protein;protein_id=TMQ38505.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Protein Homology	pseudogene	403	893	.	+	.	ID=gene-AO053_05205;Name=AO053_05205;Note=disrupted;description=glycogen phosphorylase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05205;pseudo=true
GCA_005888185.1|LNKP01000057.1	Genbank	gene	1154	2692	.	+	.	ID=gene-AO053_05210;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=AO053_05210
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	1154	2692	.	+	0	ID=cds-TMQ38506.1;Parent=gene-AO053_05210;Dbxref=NCBI_GP:TMQ38506.1;Name=TMQ38506.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996049.1;locus_tag=AO053_05210;product=NAD(P) transhydrogenase subunit alpha;protein_id=TMQ38506.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	2703	4127	.	+	.	ID=gene-AO053_05215;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=AO053_05215
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	2703	4127	.	+	0	ID=cds-TMQ38507.1;Parent=gene-AO053_05215;Dbxref=NCBI_GP:TMQ38507.1;Name=TMQ38507.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43010.1;locus_tag=AO053_05215;product=pyridine nucleotide transhydrogenase;protein_id=TMQ38507.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	4191	5108	.	-	.	ID=gene-AO053_05220;Name=AO053_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05220
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	4191	5108	.	-	0	ID=cds-TMQ38508.1;Parent=gene-AO053_05220;Dbxref=NCBI_GP:TMQ38508.1;Name=TMQ38508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656773.1;locus_tag=AO053_05220;product=LysR family transcriptional regulator;protein_id=TMQ38508.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	5204	7810	.	+	.	ID=gene-AO053_05225;Name=AO053_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05225
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	5204	7810	.	+	0	ID=cds-TMQ38509.1;Parent=gene-AO053_05225;Dbxref=NCBI_GP:TMQ38509.1;Name=TMQ38509.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525788.1;locus_tag=AO053_05225;product=DNA topoisomerase I subunit omega;protein_id=TMQ38509.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Protein Homology	pseudogene	7885	8459	.	-	.	ID=gene-AO053_05230;Name=AO053_05230;Note=disrupted;description=FMN-dependent NADH-azoreductase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05230;pseudo=true
GCA_005888185.1|LNKP01000057.1	Genbank	gene	8744	10675	.	+	.	ID=gene-AO053_05235;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AO053_05235
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	8744	10675	.	+	0	ID=cds-TMQ38510.1;Parent=gene-AO053_05235;Dbxref=NCBI_GP:TMQ38510.1;Name=TMQ38510.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK77.1;locus_tag=AO053_05235;product=threonine--tRNA ligase;protein_id=TMQ38510.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	11088	11894	.	+	.	ID=gene-AO053_05240;Name=AO053_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05240
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	11088	11894	.	+	0	ID=cds-TMQ38511.1;Parent=gene-AO053_05240;Dbxref=NCBI_GP:TMQ38511.1;Name=TMQ38511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996042.1;locus_tag=AO053_05240;product=hypothetical protein;protein_id=TMQ38511.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	12169	13530	.	+	.	ID=gene-AO053_05245;Name=AO053_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05245
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	12169	13530	.	+	0	ID=cds-TMQ38512.1;Parent=gene-AO053_05245;Dbxref=NCBI_GP:TMQ38512.1;Name=TMQ38512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996042.1;locus_tag=AO053_05245;product=hypothetical protein;protein_id=TMQ38512.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	13780	14109	.	-	.	ID=gene-AO053_05250;Name=AO053_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05250
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	13780	14109	.	-	0	ID=cds-TMQ38513.1;Parent=gene-AO053_05250;Dbxref=NCBI_GP:TMQ38513.1;Name=TMQ38513.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996041.1;locus_tag=AO053_05250;product=sulfur relay protein TusE;protein_id=TMQ38513.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	14111	15034	.	-	.	ID=gene-AO053_05255;Name=AO053_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05255
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	14111	15034	.	-	0	ID=cds-TMQ38514.1;Parent=gene-AO053_05255;Dbxref=NCBI_GP:TMQ38514.1;Name=TMQ38514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634611.1;locus_tag=AO053_05255;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=TMQ38514.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	15192	16526	.	+	.	ID=gene-AO053_05260;Name=AO053_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05260
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	15192	16526	.	+	0	ID=cds-TMQ38515.1;Parent=gene-AO053_05260;Dbxref=NCBI_GP:TMQ38515.1;Name=TMQ38515.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O30867.1;locus_tag=AO053_05260;product=condensin subunit F;protein_id=TMQ38515.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	16573	17304	.	+	.	ID=gene-AO053_05265;Name=AO053_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05265
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	16573	17304	.	+	0	ID=cds-TMQ38516.1;Parent=gene-AO053_05265;Dbxref=NCBI_GP:TMQ38516.1;Name=TMQ38516.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653967.1;locus_tag=AO053_05265;product=condensin subunit E;protein_id=TMQ38516.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	17304	21836	.	+	.	ID=gene-AO053_05270;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=AO053_05270
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	17304	21836	.	+	0	ID=cds-TMQ38517.1;Parent=gene-AO053_05270;Dbxref=NCBI_GP:TMQ38517.1;Name=TMQ38517.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687203.1;locus_tag=AO053_05270;product=cell division protein MukB;protein_id=TMQ38517.1;transl_table=11
GCA_005888185.1|LNKP01000057.1	Genbank	gene	21917	22873	.	+	.	ID=gene-AO053_05275;Name=AO053_05275;end_range=22873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05275;partial=true
GCA_005888185.1|LNKP01000057.1	Protein Homology	CDS	21917	22873	.	+	0	ID=cds-TMQ38518.1;Parent=gene-AO053_05275;Dbxref=NCBI_GP:TMQ38518.1;Name=TMQ38518.1;end_range=22873,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525795.1;locus_tag=AO053_05275;partial=true;product=modification methylase;protein_id=TMQ38518.1;transl_table=11
##sequence-region LNKP01000058.1 1 7644
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000058.1	Genbank	region	1	7644	.	+	.	ID=LNKP01000058.1:1..7644;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000058.1	Genbank	gene	36	992	.	+	.	ID=gene-AO053_05280;Name=AO053_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05280
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	36	992	.	+	0	ID=cds-TMQ38487.1;Parent=gene-AO053_05280;Dbxref=NCBI_GP:TMQ38487.1;Name=TMQ38487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O68584.1;locus_tag=AO053_05280;product=restriction endonuclease;protein_id=TMQ38487.1;transl_table=11
GCA_005888185.1|LNKP01000058.1	Genbank	gene	1201	2076	.	+	.	ID=gene-AO053_05285;Name=AO053_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05285
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	1201	2076	.	+	0	ID=cds-TMQ38488.1;Parent=gene-AO053_05285;Dbxref=NCBI_GP:TMQ38488.1;Name=TMQ38488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525796.1;locus_tag=AO053_05285;product=hypothetical protein;protein_id=TMQ38488.1;transl_table=11
GCA_005888185.1|LNKP01000058.1	Genbank	gene	2089	3510	.	+	.	ID=gene-AO053_05290;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=AO053_05290
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	2089	3510	.	+	0	ID=cds-TMQ38489.1;Parent=gene-AO053_05290;Dbxref=NCBI_GP:TMQ38489.1;Name=TMQ38489.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525797.1;locus_tag=AO053_05290;product=exodeoxyribonuclease I;protein_id=TMQ38489.1;transl_table=11
GCA_005888185.1|LNKP01000058.1	Genbank	gene	4201	5478	.	-	.	ID=gene-AO053_05295;Name=AO053_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05295
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	4201	5478	.	-	0	ID=cds-TMQ38490.1;Parent=gene-AO053_05295;Dbxref=NCBI_GP:TMQ38490.1;Name=TMQ38490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962061.1;locus_tag=AO053_05295;product=PAS domain-containing sensor histidine kinase;protein_id=TMQ38490.1;transl_table=11
GCA_005888185.1|LNKP01000058.1	Genbank	gene	5475	6170	.	-	.	ID=gene-AO053_05300;Name=AO053_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05300
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	5475	6170	.	-	0	ID=cds-TMQ38491.1;Parent=gene-AO053_05300;Dbxref=NCBI_GP:TMQ38491.1;Name=TMQ38491.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996031.1;locus_tag=AO053_05300;product=two-component system response regulator;protein_id=TMQ38491.1;transl_table=11
GCA_005888185.1|LNKP01000058.1	Genbank	gene	6247	7014	.	-	.	ID=gene-AO053_05305;Name=AO053_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05305
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	6247	7014	.	-	0	ID=cds-TMQ38492.1;Parent=gene-AO053_05305;Dbxref=NCBI_GP:TMQ38492.1;Name=TMQ38492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662257.1;locus_tag=AO053_05305;product=phosphate ABC transporter ATP-binding protein;protein_id=TMQ38492.1;transl_table=11
GCA_005888185.1|LNKP01000058.1	Genbank	gene	7024	7644	.	-	.	ID=gene-AO053_05310;Name=AO053_05310;end_range=7644,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05310;partial=true
GCA_005888185.1|LNKP01000058.1	Protein Homology	CDS	7024	7644	.	-	0	ID=cds-TMQ38493.1;Parent=gene-AO053_05310;Dbxref=NCBI_GP:TMQ38493.1;Name=TMQ38493.1;end_range=7644,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45190.1;locus_tag=AO053_05310;partial=true;product=phosphate ABC transporter permease;protein_id=TMQ38493.1;transl_table=11
##sequence-region LNKP01000059.1 1 18170
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000059.1	Genbank	region	1	18170	.	+	.	ID=LNKP01000059.1:1..18170;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000059.1	Genbank	pseudogene	1	227	.	-	.	ID=gene-AO053_05315;Name=AO053_05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05315;pseudo=true
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	1	227	.	-	0	ID=cds-AO053_05315;Parent=gene-AO053_05315;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45190.1;locus_tag=AO053_05315;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	229	1176	.	-	.	ID=gene-AO053_05320;Name=AO053_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05320
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	229	1176	.	-	0	ID=cds-TMQ38435.1;Parent=gene-AO053_05320;Dbxref=NCBI_GP:TMQ38435.1;Name=TMQ38435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666943.1;locus_tag=AO053_05320;product=phosphate ABC transporter permease;protein_id=TMQ38435.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	1267	2286	.	-	.	ID=gene-AO053_05325;Name=AO053_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05325
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	1267	2286	.	-	0	ID=cds-TMQ38436.1;Parent=gene-AO053_05325;Dbxref=NCBI_GP:TMQ38436.1;Name=TMQ38436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670994.1;locus_tag=AO053_05325;product=phosphate ABC transporter substrate-binding protein;protein_id=TMQ38436.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	2789	3277	.	+	.	ID=gene-AO053_05330;Name=AO053_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05330
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	2789	3277	.	+	0	ID=cds-TMQ38437.1;Parent=gene-AO053_05330;Dbxref=NCBI_GP:TMQ38437.1;Name=TMQ38437.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43707.2;locus_tag=AO053_05330;product=ferritin;protein_id=TMQ38437.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	3293	3790	.	+	.	ID=gene-AO053_05335;Name=AO053_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05335
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	3293	3790	.	+	0	ID=cds-TMQ38438.1;Parent=gene-AO053_05335;Dbxref=NCBI_GP:TMQ38438.1;Name=TMQ38438.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671000.1;locus_tag=AO053_05335;product=ferritin;protein_id=TMQ38438.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	4083	4847	.	+	.	ID=gene-AO053_05340;Name=AO053_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05340
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	4083	4847	.	+	0	ID=cds-TMQ38452.1;Parent=gene-AO053_05340;Dbxref=NCBI_GP:TMQ38452.1;Name=TMQ38452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656737.1;locus_tag=AO053_05340;product=glycosyltransferase;protein_id=TMQ38452.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	4953	6509	.	+	.	ID=gene-AO053_05345;Name=AO053_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05345
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	4953	6509	.	+	0	ID=cds-TMQ38439.1;Parent=gene-AO053_05345;Dbxref=NCBI_GP:TMQ38439.1;Name=TMQ38439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525802.1;locus_tag=AO053_05345;product=anthranilate synthase subunit I;protein_id=TMQ38439.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	6522	7103	.	+	.	ID=gene-AO053_05350;Name=AO053_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05350
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	6522	7103	.	+	0	ID=cds-TMQ38440.1;Parent=gene-AO053_05350;Dbxref=NCBI_GP:TMQ38440.1;Name=TMQ38440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641831.1;locus_tag=AO053_05350;product=anthranilate synthase subunit II;protein_id=TMQ38440.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	7152	7538	.	+	.	ID=gene-AO053_05355;Name=AO053_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05355
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	7152	7538	.	+	0	ID=cds-TMQ38441.1;Parent=gene-AO053_05355;Dbxref=NCBI_GP:TMQ38441.1;Name=TMQ38441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631850.1;locus_tag=AO053_05355;product=hypothetical protein;protein_id=TMQ38441.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	7591	8592	.	+	.	ID=gene-AO053_05360;Name=AO053_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05360
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	7591	8592	.	+	0	ID=cds-TMQ38442.1;Parent=gene-AO053_05360;Dbxref=NCBI_GP:TMQ38442.1;Name=TMQ38442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666931.1;locus_tag=AO053_05360;product=anthranilate phosphoribosyltransferase;protein_id=TMQ38442.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	8632	10062	.	+	.	ID=gene-AO053_05365;Name=AO053_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05365
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	8632	10062	.	+	0	ID=cds-TMQ38453.1;Parent=gene-AO053_05365;Dbxref=NCBI_GP:TMQ38453.1;Name=TMQ38453.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671013.1;locus_tag=AO053_05365;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=TMQ38453.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	10193	10459	.	+	.	ID=gene-AO053_05370;Name=AO053_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05370
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	10193	10459	.	+	0	ID=cds-TMQ38443.1;Parent=gene-AO053_05370;Dbxref=NCBI_GP:TMQ38443.1;Name=TMQ38443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525806.1;locus_tag=AO053_05370;product=hydrogenase;protein_id=TMQ38443.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	10499	13363	.	-	.	ID=gene-AO053_05375;Name=AO053_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05375
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	10499	13363	.	-	0	ID=cds-TMQ38444.1;Parent=gene-AO053_05375;Dbxref=NCBI_GP:TMQ38444.1;Name=TMQ38444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626490.1;locus_tag=AO053_05375;product=valine--tRNA ligase;protein_id=TMQ38444.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	13552	13872	.	-	.	ID=gene-AO053_05380;Name=AO053_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05380
GCA_005888185.1|LNKP01000059.1	GeneMarkS+	CDS	13552	13872	.	-	0	ID=cds-TMQ38445.1;Parent=gene-AO053_05380;Dbxref=NCBI_GP:TMQ38445.1;Name=TMQ38445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_05380;product=hypothetical protein;protein_id=TMQ38445.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	13886	14206	.	-	.	ID=gene-AO053_05385;Name=AO053_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05385
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	13886	14206	.	-	0	ID=cds-TMQ38446.1;Parent=gene-AO053_05385;Dbxref=NCBI_GP:TMQ38446.1;Name=TMQ38446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525808.1;locus_tag=AO053_05385;product=hypothetical protein;protein_id=TMQ38446.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	14428	14826	.	-	.	ID=gene-AO053_05390;Name=AO053_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05390
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	14428	14826	.	-	0	ID=cds-TMQ38447.1;Parent=gene-AO053_05390;Dbxref=NCBI_GP:TMQ38447.1;Name=TMQ38447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525809.1;locus_tag=AO053_05390;product=hypothetical protein;protein_id=TMQ38447.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	15068	15562	.	-	.	ID=gene-AO053_05395;Name=AO053_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05395
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	15068	15562	.	-	0	ID=cds-TMQ38448.1;Parent=gene-AO053_05395;Dbxref=NCBI_GP:TMQ38448.1;Name=TMQ38448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996015.1;locus_tag=AO053_05395;product=hypothetical protein;protein_id=TMQ38448.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	15578	16012	.	-	.	ID=gene-AO053_05400;Name=AO053_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05400
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	15578	16012	.	-	0	ID=cds-TMQ38449.1;Parent=gene-AO053_05400;Dbxref=NCBI_GP:TMQ38449.1;Name=TMQ38449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996014.1;locus_tag=AO053_05400;product=DNA polymerase III subunit chi;protein_id=TMQ38449.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	16247	17641	.	+	.	ID=gene-AO053_05405;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AO053_05405
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	16247	17641	.	+	0	ID=cds-TMQ38450.1;Parent=gene-AO053_05405;Dbxref=NCBI_GP:TMQ38450.1;Name=TMQ38450.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567406.1;locus_tag=AO053_05405;product=class II fumarate hydratase;protein_id=TMQ38450.1;transl_table=11
GCA_005888185.1|LNKP01000059.1	Genbank	gene	17769	18170	.	+	.	ID=gene-AO053_05410;Name=AO053_05410;end_range=18170,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05410;partial=true
GCA_005888185.1|LNKP01000059.1	Protein Homology	CDS	17769	18170	.	+	0	ID=cds-TMQ38451.1;Parent=gene-AO053_05410;Dbxref=NCBI_GP:TMQ38451.1;Name=TMQ38451.1;end_range=18170,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650560.1;locus_tag=AO053_05410;partial=true;product=hypothetical protein;protein_id=TMQ38451.1;transl_table=11
##sequence-region LNKP01000060.1 1 3381
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000060.1	Genbank	region	1	3381	.	+	.	ID=LNKP01000060.1:1..3381;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000060.1	Genbank	pseudogene	1	203	.	+	.	ID=gene-AO053_05415;Name=AO053_05415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05415;pseudo=true
GCA_005888185.1|LNKP01000060.1	Protein Homology	CDS	1	203	.	+	2	ID=cds-AO053_05415;Parent=gene-AO053_05415;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650560.1;locus_tag=AO053_05415;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000060.1	Genbank	gene	303	1127	.	-	.	ID=gene-AO053_05420;Name=AO053_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05420
GCA_005888185.1|LNKP01000060.1	Protein Homology	CDS	303	1127	.	-	0	ID=cds-TMQ38423.1;Parent=gene-AO053_05420;Dbxref=NCBI_GP:TMQ38423.1;Name=TMQ38423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525813.1;locus_tag=AO053_05420;product=S-adenosylmethionine tRNA ribosyltransferase;protein_id=TMQ38423.1;transl_table=11
GCA_005888185.1|LNKP01000060.1	Genbank	gene	1127	2146	.	-	.	ID=gene-AO053_05425;Name=AO053_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05425
GCA_005888185.1|LNKP01000060.1	Protein Homology	CDS	1127	2146	.	-	0	ID=cds-TMQ38424.1;Parent=gene-AO053_05425;Dbxref=NCBI_GP:TMQ38424.1;Name=TMQ38424.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525814.1;locus_tag=AO053_05425;product=dihydroorotate dehydrogenase 2;protein_id=TMQ38424.1;transl_table=11
GCA_005888185.1|LNKP01000060.1	Genbank	gene	2356	2441	.	-	.	ID=gene-AO053_05430;Name=AO053_05430;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_05430
GCA_005888185.1|LNKP01000060.1	tRNAscan-SE	tRNA	2356	2441	.	-	.	ID=rna-AO053_05430;Parent=gene-AO053_05430;anticodon=(pos:complement(2405..2407));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_05430;product=tRNA-Leu
GCA_005888185.1|LNKP01000060.1	tRNAscan-SE	exon	2356	2441	.	-	.	ID=exon-AO053_05430-1;Parent=rna-AO053_05430;anticodon=(pos:complement(2405..2407));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_05430;product=tRNA-Leu
GCA_005888185.1|LNKP01000060.1	Genbank	gene	2727	3381	.	+	.	ID=gene-AO053_05435;Name=AO053_05435;end_range=3381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05435;partial=true
GCA_005888185.1|LNKP01000060.1	Protein Homology	CDS	2727	3381	.	+	0	ID=cds-TMQ38425.1;Parent=gene-AO053_05435;Dbxref=NCBI_GP:TMQ38425.1;Name=TMQ38425.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;end_range=3381,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525815.1;locus_tag=AO053_05435;partial=true;product=transcriptional regulator;protein_id=TMQ38425.1;transl_table=11
##sequence-region LNKP01000061.1 1 5442
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000061.1	Genbank	region	1	5442	.	+	.	ID=LNKP01000061.1:1..5442;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000061.1	Genbank	gene	239	1168	.	+	.	ID=gene-AO053_05440;Name=AO053_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05440
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	239	1168	.	+	0	ID=cds-TMQ38406.1;Parent=gene-AO053_05440;Dbxref=NCBI_GP:TMQ38406.1;Name=TMQ38406.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525816.1;locus_tag=AO053_05440;product=universal stress protein UspE;protein_id=TMQ38406.1;transl_table=11
GCA_005888185.1|LNKP01000061.1	Genbank	gene	1380	1553	.	+	.	ID=gene-AO053_05445;Name=AO053_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05445
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	1380	1553	.	+	0	ID=cds-TMQ38407.1;Parent=gene-AO053_05445;Dbxref=NCBI_GP:TMQ38407.1;Name=TMQ38407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996006.1;locus_tag=AO053_05445;product=ABC transporter;protein_id=TMQ38407.1;transl_table=11
GCA_005888185.1|LNKP01000061.1	Genbank	gene	1585	2295	.	+	.	ID=gene-AO053_05450;Name=AO053_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05450
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	1585	2295	.	+	0	ID=cds-TMQ38408.1;Parent=gene-AO053_05450;Dbxref=NCBI_GP:TMQ38408.1;Name=TMQ38408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996005.1;locus_tag=AO053_05450;product=hypothetical protein;protein_id=TMQ38408.1;transl_table=11
GCA_005888185.1|LNKP01000061.1	Genbank	gene	2305	3105	.	+	.	ID=gene-AO053_05455;Name=AO053_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05455
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	2305	3105	.	+	0	ID=cds-TMQ38409.1;Parent=gene-AO053_05455;Dbxref=NCBI_GP:TMQ38409.1;Name=TMQ38409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706721.1;locus_tag=AO053_05455;product=hypothetical protein;protein_id=TMQ38409.1;transl_table=11
GCA_005888185.1|LNKP01000061.1	Genbank	gene	3226	3978	.	+	.	ID=gene-AO053_05460;Name=AO053_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05460
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	3226	3978	.	+	0	ID=cds-TMQ38410.1;Parent=gene-AO053_05460;Dbxref=NCBI_GP:TMQ38410.1;Name=TMQ38410.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527684.1;locus_tag=AO053_05460;product=NAD(P)-dependent oxidoreductase;protein_id=TMQ38410.1;transl_table=11
GCA_005888185.1|LNKP01000061.1	Genbank	gene	3995	5188	.	+	.	ID=gene-AO053_05465;Name=AO053_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05465
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	3995	5188	.	+	0	ID=cds-TMQ38411.1;Parent=gene-AO053_05465;Dbxref=NCBI_GP:TMQ38411.1;Name=TMQ38411.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527683.1;locus_tag=AO053_05465;product=tryptophan synthase subunit beta;protein_id=TMQ38411.1;transl_table=11
GCA_005888185.1|LNKP01000061.1	Genbank	pseudogene	5188	5442	.	+	.	ID=gene-AO053_05470;Name=AO053_05470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05470;pseudo=true
GCA_005888185.1|LNKP01000061.1	Protein Homology	CDS	5188	5442	.	+	0	ID=cds-AO053_05470;Parent=gene-AO053_05470;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671311.1;locus_tag=AO053_05470;pseudo=true;transl_table=11
##sequence-region LNKP01000062.1 1 4384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000062.1	Genbank	region	1	4384	.	+	.	ID=LNKP01000062.1:1..4384;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000062.1	Genbank	gene	1	550	.	+	.	ID=gene-AO053_05475;Name=AO053_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05475;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000062.1	Protein Homology	CDS	1	550	.	+	1	ID=cds-TMQ38367.1;Parent=gene-AO053_05475;Dbxref=NCBI_GP:TMQ38367.1;Name=TMQ38367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527682.1;locus_tag=AO053_05475;partial=true;product=tryptophan synthase subunit alpha;protein_id=TMQ38367.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000062.1	Genbank	gene	772	2832	.	+	.	ID=gene-AO053_05480;Name=AO053_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05480
GCA_005888185.1|LNKP01000062.1	Protein Homology	CDS	772	2832	.	+	0	ID=cds-TMQ38368.1;Parent=gene-AO053_05480;Dbxref=NCBI_GP:TMQ38368.1;Name=TMQ38368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996000.1;locus_tag=AO053_05480;product=restriction endonuclease subunit M;protein_id=TMQ38368.1;transl_table=11
GCA_005888185.1|LNKP01000062.1	Genbank	gene	2844	3965	.	+	.	ID=gene-AO053_05485;Name=AO053_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05485
GCA_005888185.1|LNKP01000062.1	Protein Homology	CDS	2844	3965	.	+	0	ID=cds-TMQ38369.1;Parent=gene-AO053_05485;Dbxref=NCBI_GP:TMQ38369.1;Name=TMQ38369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525823.1;locus_tag=AO053_05485;product=type IV pili;protein_id=TMQ38369.1;transl_table=11
GCA_005888185.1|LNKP01000062.1	Genbank	pseudogene	4148	4384	.	-	.	ID=gene-AO053_05490;Name=AO053_05490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05490;pseudo=true
GCA_005888185.1|LNKP01000062.1	Protein Homology	CDS	4148	4384	.	-	0	ID=cds-AO053_05490;Parent=gene-AO053_05490;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660359.1;locus_tag=AO053_05490;pseudo=true;transl_table=11
##sequence-region LNKP01000063.1 1 27012
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000063.1	Genbank	region	1	27012	.	+	.	ID=LNKP01000063.1:1..27012;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000063.1	Genbank	gene	1	715	.	-	.	ID=gene-AO053_05495;Name=AO053_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05495;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	1	715	.	-	0	ID=cds-TMQ38321.1;Parent=gene-AO053_05495;Dbxref=NCBI_GP:TMQ38321.1;Name=TMQ38321.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660359.1;locus_tag=AO053_05495;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=TMQ38321.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	774	1250	.	+	.	ID=gene-AO053_05500;Name=AO053_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05500
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	774	1250	.	+	0	ID=cds-TMQ38322.1;Parent=gene-AO053_05500;Dbxref=NCBI_GP:TMQ38322.1;Name=TMQ38322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634649.1;locus_tag=AO053_05500;product=aminoacyl-tRNA deacylase;protein_id=TMQ38322.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	1408	1626	.	-	.	ID=gene-AO053_05505;Name=AO053_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05505
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	1408	1626	.	-	0	ID=cds-TMQ38323.1;Parent=gene-AO053_05505;Dbxref=NCBI_GP:TMQ38323.1;Name=TMQ38323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46449.1;locus_tag=AO053_05505;product=cold shock domain protein CspD;protein_id=TMQ38323.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	1775	1933	.	-	.	ID=gene-AO053_05510;Name=AO053_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05510
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	1775	1933	.	-	0	ID=cds-TMQ38324.1;Parent=gene-AO053_05510;Dbxref=NCBI_GP:TMQ38324.1;Name=TMQ38324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKG0.1;locus_tag=AO053_05510;product=hypothetical protein;protein_id=TMQ38324.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	1926	2645	.	-	.	ID=gene-AO053_05515;Name=AO053_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05515
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	1926	2645	.	-	0	ID=cds-TMQ38325.1;Parent=gene-AO053_05515;Dbxref=NCBI_GP:TMQ38325.1;Name=TMQ38325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656617.1;locus_tag=AO053_05515;product=pseudouridine synthase;protein_id=TMQ38325.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	2639	2959	.	-	.	ID=gene-AO053_05520;Name=AO053_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05520
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	2639	2959	.	-	0	ID=cds-TMQ38326.1;Parent=gene-AO053_05520;Dbxref=NCBI_GP:TMQ38326.1;Name=TMQ38326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650459.1;locus_tag=AO053_05520;product=anhydro-N-acetylmuramic acid kinase;protein_id=TMQ38326.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	2974	4431	.	-	.	ID=gene-AO053_05525;Name=AO053_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05525
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	2974	4431	.	-	0	ID=cds-TMQ38327.1;Parent=gene-AO053_05525;Dbxref=NCBI_GP:TMQ38327.1;Name=TMQ38327.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UC48.1;locus_tag=AO053_05525;product=tRNA s(4)U8 sulfurtransferase;protein_id=TMQ38327.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	4590	4844	.	+	.	ID=gene-AO053_05530;Name=AO053_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05530
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	4590	4844	.	+	0	ID=cds-TMQ38328.1;Parent=gene-AO053_05530;Dbxref=NCBI_GP:TMQ38328.1;Name=TMQ38328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650457.1;locus_tag=AO053_05530;product=exodeoxyribonuclease VII small subunit;protein_id=TMQ38328.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	4844	5734	.	+	.	ID=gene-AO053_05535;Name=AO053_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05535
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	4844	5734	.	+	0	ID=cds-TMQ38329.1;Parent=gene-AO053_05535;Dbxref=NCBI_GP:TMQ38329.1;Name=TMQ38329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45204.1;locus_tag=AO053_05535;product=geranyl transferase;protein_id=TMQ38329.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	5776	7653	.	+	.	ID=gene-AO053_05540;Name=AO053_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05540
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	5776	7653	.	+	0	ID=cds-TMQ38330.1;Parent=gene-AO053_05540;Dbxref=NCBI_GP:TMQ38330.1;Name=TMQ38330.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666875.1;locus_tag=AO053_05540;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=TMQ38330.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	7689	8141	.	-	.	ID=gene-AO053_05545;Name=AO053_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05545
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	7689	8141	.	-	0	ID=cds-TMQ38331.1;Parent=gene-AO053_05545;Dbxref=NCBI_GP:TMQ38331.1;Name=TMQ38331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688427.1;locus_tag=AO053_05545;product=stringent starvation protein B;protein_id=TMQ38331.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	8141	8779	.	-	.	ID=gene-AO053_05550;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AO053_05550
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	8141	8779	.	-	0	ID=cds-TMQ38332.1;Parent=gene-AO053_05550;Dbxref=NCBI_GP:TMQ38332.1;Name=TMQ38332.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=EXISTENCE: similar to AA sequence:SwissProt:P45207.1;locus_tag=AO053_05550;product=stringent starvation protein A;protein_id=TMQ38332.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	8959	9351	.	-	.	ID=gene-AO053_05555;Name=AO053_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05555
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	8959	9351	.	-	0	ID=cds-TMQ38333.1;Parent=gene-AO053_05555;Dbxref=NCBI_GP:TMQ38333.1;Name=TMQ38333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKG9.1;locus_tag=AO053_05555;product=30S ribosomal protein S9;protein_id=TMQ38333.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	9368	9796	.	-	.	ID=gene-AO053_05560;Name=AO053_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05560
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	9368	9796	.	-	0	ID=cds-TMQ38334.1;Parent=gene-AO053_05560;Dbxref=NCBI_GP:TMQ38334.1;Name=TMQ38334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015432456.1;locus_tag=AO053_05560;product=50S ribosomal protein L13;protein_id=TMQ38334.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	10260	11138	.	+	.	ID=gene-AO053_05565;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=AO053_05565
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	10260	11138	.	+	0	ID=cds-TMQ38335.1;Parent=gene-AO053_05565;Dbxref=NCBI_GP:TMQ38335.1;Name=TMQ38335.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;inference=EXISTENCE: similar to AA sequence:SwissProt:P45208.1;locus_tag=AO053_05565;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=TMQ38335.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	11227	11955	.	-	.	ID=gene-AO053_05570;Name=AO053_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05570
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	11227	11955	.	-	0	ID=cds-TMQ38336.1;Parent=gene-AO053_05570;Dbxref=NCBI_GP:TMQ38336.1;Name=TMQ38336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45209.1;locus_tag=AO053_05570;product=dethiobiotin synthetase;protein_id=TMQ38336.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	12058	12324	.	-	.	ID=gene-AO053_05575;Name=AO053_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05575
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	12058	12324	.	-	0	ID=cds-TMQ38353.1;Parent=gene-AO053_05575;Dbxref=NCBI_GP:TMQ38353.1;Name=TMQ38353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688423.1;locus_tag=AO053_05575;product=hypothetical protein;protein_id=TMQ38353.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	12385	13041	.	-	.	ID=gene-AO053_05580;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AO053_05580
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	12385	13041	.	-	0	ID=cds-TMQ38337.1;Parent=gene-AO053_05580;Dbxref=NCBI_GP:TMQ38337.1;Name=TMQ38337.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645472.1;locus_tag=AO053_05580;product=GTP cyclohydrolase I;protein_id=TMQ38337.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	13179	14393	.	+	.	ID=gene-AO053_05585;Name=AO053_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05585
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	13179	14393	.	+	0	ID=cds-TMQ38338.1;Parent=gene-AO053_05585;Dbxref=NCBI_GP:TMQ38338.1;Name=TMQ38338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650441.1;locus_tag=AO053_05585;product=molybdopterin molybdenumtransferase;protein_id=TMQ38338.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	14397	15128	.	+	.	ID=gene-AO053_05590;Name=AO053_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05590
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	14397	15128	.	+	0	ID=cds-TMQ38339.1;Parent=gene-AO053_05590;Dbxref=NCBI_GP:TMQ38339.1;Name=TMQ38339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525837.1;locus_tag=AO053_05590;product=molybdopterin-synthase adenylyltransferase;protein_id=TMQ38339.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	15195	15518	.	+	.	ID=gene-AO053_05595;Name=AO053_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05595
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	15195	15518	.	+	0	ID=cds-TMQ38340.1;Parent=gene-AO053_05595;Dbxref=NCBI_GP:TMQ38340.1;Name=TMQ38340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995988.1;locus_tag=AO053_05595;product=hypothetical protein;protein_id=TMQ38340.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	15901	16371	.	-	.	ID=gene-AO053_05600;Name=AO053_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05600
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	15901	16371	.	-	0	ID=cds-TMQ38341.1;Parent=gene-AO053_05600;Dbxref=NCBI_GP:TMQ38341.1;Name=TMQ38341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995987.1;locus_tag=AO053_05600;product=hypothetical protein;protein_id=TMQ38341.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	16414	17055	.	-	.	ID=gene-AO053_05605;Name=AO053_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05605
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	16414	17055	.	-	0	ID=cds-TMQ38342.1;Parent=gene-AO053_05605;Dbxref=NCBI_GP:TMQ38342.1;Name=TMQ38342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44202.1;locus_tag=AO053_05605;product=cytochrome C biogenesis protein;protein_id=TMQ38342.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	17067	18128	.	-	.	ID=gene-AO053_05610;Name=AO053_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05610
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	17067	18128	.	-	0	ID=cds-TMQ38343.1;Parent=gene-AO053_05610;Dbxref=NCBI_GP:TMQ38343.1;Name=TMQ38343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628780.1;locus_tag=AO053_05610;product=peptide methionine sulfoxide reductase;protein_id=TMQ38343.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	18323	18829	.	-	.	ID=gene-AO053_05615;Name=AO053_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05615
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	18323	18829	.	-	0	ID=cds-TMQ38344.1;Parent=gene-AO053_05615;Dbxref=NCBI_GP:TMQ38344.1;Name=TMQ38344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707106.1;locus_tag=AO053_05615;product=hypothetical protein;protein_id=TMQ38344.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	18783	19316	.	-	.	ID=gene-AO053_05620;Name=AO053_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05620
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	18783	19316	.	-	0	ID=cds-TMQ38345.1;Parent=gene-AO053_05620;Dbxref=NCBI_GP:TMQ38345.1;Name=TMQ38345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995983.1;locus_tag=AO053_05620;product=hypothetical protein;protein_id=TMQ38345.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	19472	19855	.	+	.	ID=gene-AO053_05625;Name=AO053_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05625
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	19472	19855	.	+	0	ID=cds-TMQ38346.1;Parent=gene-AO053_05625;Dbxref=NCBI_GP:TMQ38346.1;Name=TMQ38346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693911.1;locus_tag=AO053_05625;product=transcriptional regulator;protein_id=TMQ38346.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	20133	20678	.	-	.	ID=gene-AO053_05630;Name=AO053_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05630
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	20133	20678	.	-	0	ID=cds-TMQ38347.1;Parent=gene-AO053_05630;Dbxref=NCBI_GP:TMQ38347.1;Name=TMQ38347.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652768.1;locus_tag=AO053_05630;product=RNA polymerase subunit sigma;protein_id=TMQ38347.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Protein Homology	pseudogene	20824	21136	.	-	.	ID=gene-AO053_05635;Name=AO053_05635;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05635;pseudo=true
GCA_005888185.1|LNKP01000063.1	Genbank	gene	21895	23259	.	+	.	ID=gene-AO053_05640;Name=AO053_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05640
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	21895	23259	.	+	0	ID=cds-TMQ38348.1;Parent=gene-AO053_05640;Dbxref=NCBI_GP:TMQ38348.1;Name=TMQ38348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550788.1;locus_tag=AO053_05640;product=hypothetical protein;protein_id=TMQ38348.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	23337	23879	.	-	.	ID=gene-AO053_05645;Name=AO053_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05645
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	23337	23879	.	-	0	ID=cds-TMQ38349.1;Parent=gene-AO053_05645;Dbxref=NCBI_GP:TMQ38349.1;Name=TMQ38349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525843.1;locus_tag=AO053_05645;product=histone;protein_id=TMQ38349.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	24094	24588	.	-	.	ID=gene-AO053_05650;Name=AO053_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05650
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	24094	24588	.	-	0	ID=cds-TMQ38350.1;Parent=gene-AO053_05650;Dbxref=NCBI_GP:TMQ38350.1;Name=TMQ38350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44164.1;locus_tag=AO053_05650;product=phosphohistidine phosphatase;protein_id=TMQ38350.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	24647	25984	.	-	.	ID=gene-AO053_05655;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AO053_05655
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	24647	25984	.	-	0	ID=cds-TMQ38351.1;Parent=gene-AO053_05655;Dbxref=NCBI_GP:TMQ38351.1;Name=TMQ38351.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550790.1;locus_tag=AO053_05655;product=phosphoglucosamine mutase;protein_id=TMQ38351.1;transl_table=11
GCA_005888185.1|LNKP01000063.1	Genbank	gene	26022	26849	.	-	.	ID=gene-AO053_05660;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=AO053_05660
GCA_005888185.1|LNKP01000063.1	Protein Homology	CDS	26022	26849	.	-	0	ID=cds-TMQ38352.1;Parent=gene-AO053_05660;Dbxref=NCBI_GP:TMQ38352.1;Name=TMQ38352.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962129.1;locus_tag=AO053_05660;product=dihydropteroate synthase;protein_id=TMQ38352.1;transl_table=11
##sequence-region LNKP01000064.1 1 3722
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000064.1	Genbank	region	1	3722	.	+	.	ID=LNKP01000064.1:1..3722;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000064.1	Genbank	gene	1	1758	.	-	.	ID=gene-AO053_05665;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=AO053_05665;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000064.1	Protein Homology	CDS	1	1758	.	-	0	ID=cds-TMQ38277.1;Parent=gene-AO053_05665;Dbxref=NCBI_GP:TMQ38277.1;Name=TMQ38277.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962130.1;locus_tag=AO053_05665;partial=true;product=ATP-dependent metalloprotease;protein_id=TMQ38277.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000064.1	Genbank	gene	1849	2478	.	-	.	ID=gene-AO053_05670;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=AO053_05670
GCA_005888185.1|LNKP01000064.1	Protein Homology	CDS	1849	2478	.	-	0	ID=cds-TMQ38278.1;Parent=gene-AO053_05670;Dbxref=NCBI_GP:TMQ38278.1;Name=TMQ38278.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995972.1;locus_tag=AO053_05670;product=23S rRNA methyltransferase;protein_id=TMQ38278.1;transl_table=11
GCA_005888185.1|LNKP01000064.1	Genbank	gene	2607	2906	.	+	.	ID=gene-AO053_05675;Name=AO053_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05675
GCA_005888185.1|LNKP01000064.1	Protein Homology	CDS	2607	2906	.	+	0	ID=cds-TMQ38279.1;Parent=gene-AO053_05675;Dbxref=NCBI_GP:TMQ38279.1;Name=TMQ38279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688408.1;locus_tag=AO053_05675;product=RNA-binding protein;protein_id=TMQ38279.1;transl_table=11
GCA_005888185.1|LNKP01000064.1	Genbank	gene	2945	3421	.	-	.	ID=gene-AO053_05680;Name=AO053_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05680
GCA_005888185.1|LNKP01000064.1	Protein Homology	CDS	2945	3421	.	-	0	ID=cds-TMQ38280.1;Parent=gene-AO053_05680;Dbxref=NCBI_GP:TMQ38280.1;Name=TMQ38280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702211.1;locus_tag=AO053_05680;product=transcription elongation factor GreA;protein_id=TMQ38280.1;transl_table=11
GCA_005888185.1|LNKP01000064.1	Genbank	gene	3527	3722	.	-	.	ID=gene-AO053_05685;Name=AO053_05685;end_range=3722,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05685;partial=true
GCA_005888185.1|LNKP01000064.1	GeneMarkS+	CDS	3527	3722	.	-	1	ID=cds-TMQ38281.1;Parent=gene-AO053_05685;Dbxref=NCBI_GP:TMQ38281.1;Name=TMQ38281.1;end_range=3722,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_05685;partial=true;product=hypothetical protein;protein_id=TMQ38281.1;transl_table=11
##sequence-region LNKP01000065.1 1 1642
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000065.1	Genbank	region	1	1642	.	+	.	ID=LNKP01000065.1:1..1642;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000065.1	Genbank	gene	1	1290	.	+	.	ID=gene-AO053_05690;Name=AO053_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05690;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000065.1	Protein Homology	CDS	1	1290	.	+	0	ID=cds-TMQ38268.1;Parent=gene-AO053_05690;Dbxref=NCBI_GP:TMQ38268.1;Name=TMQ38268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525850.1;locus_tag=AO053_05690;partial=true;product=D-alanyl-D-alanine carboxypeptidase;protein_id=TMQ38268.1;start_range=.,1;transl_table=11
##sequence-region LNKP01000066.1 1 886
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000066.1	Genbank	region	1	886	.	+	.	ID=LNKP01000066.1:1..886;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000066.1	Genbank	pseudogene	1	108	.	-	.	ID=gene-AO053_05695;Name=AO053_05695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05695;pseudo=true
GCA_005888185.1|LNKP01000066.1	Protein Homology	CDS	1	108	.	-	0	ID=cds-AO053_05695;Parent=gene-AO053_05695;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525912.1;locus_tag=AO053_05695;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000066.1	Genbank	gene	102	572	.	+	.	ID=gene-AO053_05700;Name=AO053_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05700
GCA_005888185.1|LNKP01000066.1	Protein Homology	CDS	102	572	.	+	0	ID=cds-TMQ38267.1;Parent=gene-AO053_05700;Dbxref=NCBI_GP:TMQ38267.1;Name=TMQ38267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996123.1;locus_tag=AO053_05700;product=pyruvate kinase;protein_id=TMQ38267.1;transl_table=11
##sequence-region LNKP01000067.1 1 1435
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000067.1	Genbank	region	1	1435	.	+	.	ID=LNKP01000067.1:1..1435;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000067.1	Genbank	gene	526	843	.	-	.	ID=gene-AO053_05705;Name=AO053_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05705
GCA_005888185.1|LNKP01000067.1	Protein Homology	CDS	526	843	.	-	0	ID=cds-TMQ38247.1;Parent=gene-AO053_05705;Dbxref=NCBI_GP:TMQ38247.1;Name=TMQ38247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996118.1;locus_tag=AO053_05705;product=integrase;protein_id=TMQ38247.1;transl_table=11
##sequence-region LNKP01000068.1 1 1357
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000068.1	Genbank	region	1	1357	.	+	.	ID=LNKP01000068.1:1..1357;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000068.1	Genbank	pseudogene	1	1357	.	-	.	ID=gene-AO053_05710;Name=AO053_05710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05710;pseudo=true
GCA_005888185.1|LNKP01000068.1	Protein Homology	CDS	1	1357	.	-	1	ID=cds-AO053_05710;Parent=gene-AO053_05710;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO053_05710;pseudo=true;transl_table=11
##sequence-region LNKP01000069.1 1 133167
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000069.1	Genbank	region	1	133167	.	+	.	ID=LNKP01000069.1:1..133167;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000069.1	Genbank	pseudogene	1	266	.	+	.	ID=gene-AO053_05715;Name=AO053_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05715;pseudo=true
GCA_005888185.1|LNKP01000069.1	GeneMarkS+	CDS	1	266	.	+	2	ID=cds-AO053_05715;Parent=gene-AO053_05715;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_05715;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	278	880	.	+	.	ID=gene-AO053_05720;Name=AO053_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05720
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	278	880	.	+	0	ID=cds-TMQ38088.1;Parent=gene-AO053_05720;Dbxref=NCBI_GP:TMQ38088.1;Name=TMQ38088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525580.1;locus_tag=AO053_05720;product=hypothetical protein;protein_id=TMQ38088.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	877	1335	.	+	.	ID=gene-AO053_05725;Name=AO053_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05725
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	877	1335	.	+	0	ID=cds-TMQ38089.1;Parent=gene-AO053_05725;Dbxref=NCBI_GP:TMQ38089.1;Name=TMQ38089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525579.1;locus_tag=AO053_05725;product=enoyl-CoA hydratase;protein_id=TMQ38089.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	1983	2708	.	+	.	ID=gene-AO053_05730;Name=AO053_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05730
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	1983	2708	.	+	0	ID=cds-TMQ38090.1;Parent=gene-AO053_05730;Dbxref=NCBI_GP:TMQ38090.1;Name=TMQ38090.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44676.2;locus_tag=AO053_05730;product=tRNA (cytidine/uridine-2'-O-)-methyltransferase;protein_id=TMQ38090.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	2761	3213	.	+	.	ID=gene-AO053_05735;Name=AO053_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05735
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	2761	3213	.	+	0	ID=cds-TMQ38091.1;Parent=gene-AO053_05735;Dbxref=NCBI_GP:TMQ38091.1;Name=TMQ38091.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525578.1;locus_tag=AO053_05735;product=transcriptional regulator;protein_id=TMQ38091.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	3281	4495	.	+	.	ID=gene-AO053_05740;Name=AO053_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05740
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	3281	4495	.	+	0	ID=cds-TMQ38092.1;Parent=gene-AO053_05740;Dbxref=NCBI_GP:TMQ38092.1;Name=TMQ38092.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272013.1;locus_tag=AO053_05740;product=cysteine desulfurase;protein_id=TMQ38092.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	4555	4935	.	+	.	ID=gene-AO053_05745;Name=AO053_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05745
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	4555	4935	.	+	0	ID=cds-TMQ38093.1;Parent=gene-AO053_05745;Dbxref=NCBI_GP:TMQ38093.1;Name=TMQ38093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57074.2;locus_tag=AO053_05745;product=scaffolding protein;protein_id=TMQ38093.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	4993	5316	.	+	.	ID=gene-AO053_05750;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=AO053_05750
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	4993	5316	.	+	0	ID=cds-TMQ38094.1;Parent=gene-AO053_05750;Dbxref=NCBI_GP:TMQ38094.1;Name=TMQ38094.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527473.1;locus_tag=AO053_05750;product=iron-sulfur cluster assembly protein IscA;protein_id=TMQ38094.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	5329	5853	.	+	.	ID=gene-AO053_05755;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=AO053_05755
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	5329	5853	.	+	0	ID=cds-TMQ38095.1;Parent=gene-AO053_05755;Dbxref=NCBI_GP:TMQ38095.1;Name=TMQ38095.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996126.1;locus_tag=AO053_05755;product=co-chaperone HscB;protein_id=TMQ38095.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	5904	6590	.	+	.	ID=gene-AO053_05760;Name=AO053_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05760
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	5904	6590	.	+	0	ID=cds-TMQ38096.1;Parent=gene-AO053_05760;Dbxref=NCBI_GP:TMQ38096.1;Name=TMQ38096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659899.1;locus_tag=AO053_05760;product=hypothetical protein;protein_id=TMQ38096.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	6609	8468	.	+	.	ID=gene-AO053_05765;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=AO053_05765
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	6609	8468	.	+	0	ID=cds-TMQ38097.1;Parent=gene-AO053_05765;Dbxref=NCBI_GP:TMQ38097.1;Name=TMQ38097.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701602.1;locus_tag=AO053_05765;product=molecular chaperone HscA;protein_id=TMQ38097.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	8508	8849	.	+	.	ID=gene-AO053_05770;Name=AO053_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05770
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	8508	8849	.	+	0	ID=cds-TMQ38098.1;Parent=gene-AO053_05770;Dbxref=NCBI_GP:TMQ38098.1;Name=TMQ38098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005623313.1;locus_tag=AO053_05770;product=2Fe-2S ferredoxin;protein_id=TMQ38098.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	8849	9043	.	+	.	ID=gene-AO053_05775;Name=AO053_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05775
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	8849	9043	.	+	0	ID=cds-TMQ38099.1;Parent=gene-AO053_05775;Dbxref=NCBI_GP:TMQ38099.1;Name=TMQ38099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44668.1;locus_tag=AO053_05775;product=Fe-S assembly protein IscX;protein_id=TMQ38099.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	9094	9708	.	-	.	ID=gene-AO053_05780;Name=AO053_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05780
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	9094	9708	.	-	0	ID=cds-TMQ38100.1;Parent=gene-AO053_05780;Dbxref=NCBI_GP:TMQ38100.1;Name=TMQ38100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43989.1;locus_tag=AO053_05780;product=hypothetical protein;protein_id=TMQ38100.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	9726	10997	.	-	.	ID=gene-AO053_05785;Name=AO053_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05785
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	9726	10997	.	-	0	ID=cds-TMQ38101.1;Parent=gene-AO053_05785;Dbxref=NCBI_GP:TMQ38101.1;Name=TMQ38101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43823.2;locus_tag=AO053_05785;product=histidyl-tRNA synthetase;protein_id=TMQ38101.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	11007	12113	.	-	.	ID=gene-AO053_05790;Name=AO053_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05790
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	11007	12113	.	-	0	ID=cds-TMQ38102.1;Parent=gene-AO053_05790;Dbxref=NCBI_GP:TMQ38102.1;Name=TMQ38102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666608.1;locus_tag=AO053_05790;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=TMQ38102.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	12122	13033	.	-	.	ID=gene-AO053_05795;Name=AO053_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05795
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	12122	13033	.	-	0	ID=cds-TMQ38103.1;Parent=gene-AO053_05795;Dbxref=NCBI_GP:TMQ38103.1;Name=TMQ38103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57065.1;locus_tag=AO053_05795;product=hypothetical protein;protein_id=TMQ38103.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	13105	13644	.	-	.	ID=gene-AO053_05800;Name=AO053_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05800
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	13105	13644	.	-	0	ID=cds-TMQ38104.1;Parent=gene-AO053_05800;Dbxref=NCBI_GP:TMQ38104.1;Name=TMQ38104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43988.1;locus_tag=AO053_05800;product=type IV pilus biogenesis/stability protein PilW;protein_id=TMQ38104.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	13745	14896	.	-	.	ID=gene-AO053_05805;Name=AO053_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05805
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	13745	14896	.	-	0	ID=cds-TMQ38105.1;Parent=gene-AO053_05805;Dbxref=NCBI_GP:TMQ38105.1;Name=TMQ38105.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634086.1;locus_tag=AO053_05805;product=23S rRNA (adenine(2503)-C2)-methyltransferase;protein_id=TMQ38105.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	15143	16021	.	+	.	ID=gene-AO053_05810;Name=AO053_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05810
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	15143	16021	.	+	0	ID=cds-TMQ38106.1;Parent=gene-AO053_05810;Dbxref=NCBI_GP:TMQ38106.1;Name=TMQ38106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649130.1;locus_tag=AO053_05810;product=D-alanyl-D-alanine endopeptidase;protein_id=TMQ38106.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	16382	17263	.	+	.	ID=gene-AO053_05815;Name=AO053_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05815
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	16382	17263	.	+	0	ID=cds-TMQ38107.1;Parent=gene-AO053_05815;Dbxref=NCBI_GP:TMQ38107.1;Name=TMQ38107.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701596.1;locus_tag=AO053_05815;product=iron-binding protein;protein_id=TMQ38107.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	17263	18183	.	+	.	ID=gene-AO053_05820;Name=AO053_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05820
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	17263	18183	.	+	0	ID=cds-TMQ38108.1;Parent=gene-AO053_05820;Dbxref=NCBI_GP:TMQ38108.1;Name=TMQ38108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701595.1;locus_tag=AO053_05820;product=iron ABC transporter permease;protein_id=TMQ38108.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	18187	19035	.	+	.	ID=gene-AO053_05825;Name=AO053_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05825
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	18187	19035	.	+	0	ID=cds-TMQ38109.1;Parent=gene-AO053_05825;Dbxref=NCBI_GP:TMQ38109.1;Name=TMQ38109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44661.1;locus_tag=AO053_05825;product=hypothetical protein;protein_id=TMQ38109.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	19028	19843	.	+	.	ID=gene-AO053_05830;Name=AO053_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05830
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	19028	19843	.	+	0	ID=cds-TMQ38110.1;Parent=gene-AO053_05830;Dbxref=NCBI_GP:TMQ38110.1;Name=TMQ38110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44660.1;locus_tag=AO053_05830;product=iron ABC transporter permease;protein_id=TMQ38110.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	19937	20584	.	-	.	ID=gene-AO053_05835;Name=AO053_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05835
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	19937	20584	.	-	0	ID=cds-TMQ38111.1;Parent=gene-AO053_05835;Dbxref=NCBI_GP:TMQ38111.1;Name=TMQ38111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996138.1;locus_tag=AO053_05835;product=thiaminase II;protein_id=TMQ38111.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	20595	21539	.	-	.	ID=gene-AO053_05840;Name=AO053_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05840
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	20595	21539	.	-	0	ID=cds-TMQ38112.1;Parent=gene-AO053_05840;Dbxref=NCBI_GP:TMQ38112.1;Name=TMQ38112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996139.1;locus_tag=AO053_05840;product=thiamine biosynthesis protein;protein_id=TMQ38112.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	21561	22298	.	-	.	ID=gene-AO053_05845;Name=AO053_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05845
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	21561	22298	.	-	0	ID=cds-TMQ38113.1;Parent=gene-AO053_05845;Dbxref=NCBI_GP:TMQ38113.1;Name=TMQ38113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708452.1;locus_tag=AO053_05845;product=ABC transporter permease;protein_id=TMQ38113.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	22295	23017	.	-	.	ID=gene-AO053_05850;Name=AO053_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05850
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	22295	23017	.	-	0	ID=cds-TMQ38114.1;Parent=gene-AO053_05850;Dbxref=NCBI_GP:TMQ38114.1;Name=TMQ38114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996140.1;locus_tag=AO053_05850;product=phosphonate ABC transporter ATP-binding protein;protein_id=TMQ38114.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	23416	24372	.	+	.	ID=gene-AO053_05855;Name=AO053_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05855
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	23416	24372	.	+	0	ID=cds-TMQ38115.1;Parent=gene-AO053_05855;Dbxref=NCBI_GP:TMQ38115.1;Name=TMQ38115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996141.1;locus_tag=AO053_05855;product=CMP-Neu5Ac--lipooligosaccharide alpha 2-3 sialyltransferase;protein_id=TMQ38115.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	24545	25561	.	+	.	ID=gene-AO053_05860;Name=AO053_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05860
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	24545	25561	.	+	0	ID=cds-TMQ38116.1;Parent=gene-AO053_05860;Dbxref=NCBI_GP:TMQ38116.1;Name=TMQ38116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P24325.2;locus_tag=AO053_05860;product=UDP-glucose 4-epimerase;protein_id=TMQ38116.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	25742	26980	.	+	.	ID=gene-AO053_05865;Name=AO053_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05865
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	25742	26980	.	+	0	ID=cds-TMQ38117.1;Parent=gene-AO053_05865;Dbxref=NCBI_GP:TMQ38117.1;Name=TMQ38117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525564.1;locus_tag=AO053_05865;product=AmpG family muropeptide MFS transporter;protein_id=TMQ38117.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	27065	27709	.	+	.	ID=gene-AO053_05870;Name=AO053_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05870
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	27065	27709	.	+	0	ID=cds-TMQ38118.1;Parent=gene-AO053_05870;Dbxref=NCBI_GP:TMQ38118.1;Name=TMQ38118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760097.1;locus_tag=AO053_05870;product=adenylate kinase;protein_id=TMQ38118.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	27869	28471	.	-	.	ID=gene-AO053_05875;Name=AO053_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05875
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	27869	28471	.	-	0	ID=cds-TMQ38119.1;Parent=gene-AO053_05875;Dbxref=NCBI_GP:TMQ38119.1;Name=TMQ38119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996144.1;locus_tag=AO053_05875;product=cytochrome C;protein_id=TMQ38119.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	28486	28929	.	-	.	ID=gene-AO053_05880;Name=AO053_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05880
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	28486	28929	.	-	0	ID=cds-TMQ38120.1;Parent=gene-AO053_05880;Dbxref=NCBI_GP:TMQ38120.1;Name=TMQ38120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44654.1;locus_tag=AO053_05880;product=diacylglycerol kinase;protein_id=TMQ38120.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	28935	29798	.	-	.	ID=gene-AO053_05885;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=AO053_05885
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	28935	29798	.	-	0	ID=cds-TMQ38121.1;Parent=gene-AO053_05885;Dbxref=NCBI_GP:TMQ38121.1;Name=TMQ38121.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627025.1;locus_tag=AO053_05885;product=quinol dehydrogenase;protein_id=TMQ38121.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	29798	30637	.	-	.	ID=gene-AO053_05890;Name=AO053_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05890
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	29798	30637	.	-	0	ID=cds-TMQ38122.1;Parent=gene-AO053_05890;Dbxref=NCBI_GP:TMQ38122.1;Name=TMQ38122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654033.1;locus_tag=AO053_05890;product=quinol dehydrogenase;protein_id=TMQ38122.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	30691	33174	.	-	.	ID=gene-AO053_05895;Name=AO053_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05895
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	30691	33174	.	-	0	ID=cds-TMQ38123.1;Parent=gene-AO053_05895;Dbxref=NCBI_GP:TMQ38123.1;Name=TMQ38123.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694329.1;locus_tag=AO053_05895;product=nitrate reductase;protein_id=TMQ38123.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	33211	33492	.	-	.	ID=gene-AO053_05900;Name=AO053_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05900
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	33211	33492	.	-	0	ID=cds-TMQ38124.1;Parent=gene-AO053_05900;Dbxref=NCBI_GP:TMQ38124.1;Name=TMQ38124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656333.1;locus_tag=AO053_05900;product=nitrate reductase;protein_id=TMQ38124.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	33485	34015	.	-	.	ID=gene-AO053_05905;Name=AO053_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05905
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	33485	34015	.	-	0	ID=cds-TMQ38125.1;Parent=gene-AO053_05905;Dbxref=NCBI_GP:TMQ38125.1;Name=TMQ38125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654038.1;locus_tag=AO053_05905;product=ferredoxin-type protein NapF;protein_id=TMQ38125.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Protein Homology	pseudogene	34221	34565	.	-	.	ID=gene-AO053_05910;Name=AO053_05910;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_05910;pseudo=true
GCA_005888185.1|LNKP01000069.1	Genbank	gene	34650	35390	.	-	.	ID=gene-AO053_05915;Name=AO053_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05915
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	34650	35390	.	-	0	ID=cds-TMQ38126.1;Parent=gene-AO053_05915;Dbxref=NCBI_GP:TMQ38126.1;Name=TMQ38126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662679.1;locus_tag=AO053_05915;product=tRNA (guanine-N7)-methyltransferase;protein_id=TMQ38126.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	35474	37666	.	+	.	ID=gene-AO053_05920;Name=AO053_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05920
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	35474	37666	.	+	0	ID=cds-TMQ38127.1;Parent=gene-AO053_05920;Dbxref=NCBI_GP:TMQ38127.1;Name=TMQ38127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701582.1;locus_tag=AO053_05920;product=primosomal protein N';protein_id=TMQ38127.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	37708	38754	.	-	.	ID=gene-AO053_05925;Name=AO053_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05925
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	37708	38754	.	-	0	ID=cds-TMQ38128.1;Parent=gene-AO053_05925;Dbxref=NCBI_GP:TMQ38128.1;Name=TMQ38128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500912.1;locus_tag=AO053_05925;product=hypothetical protein;protein_id=TMQ38128.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	38754	39092	.	-	.	ID=gene-AO053_05930;Name=AO053_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05930
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	38754	39092	.	-	0	ID=cds-TMQ38129.1;Parent=gene-AO053_05930;Dbxref=NCBI_GP:TMQ38129.1;Name=TMQ38129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635169.1;locus_tag=AO053_05930;product=transcriptional regulator;protein_id=TMQ38129.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	39094	39687	.	-	.	ID=gene-AO053_05935;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=AO053_05935
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	39094	39687	.	-	0	ID=cds-TMQ38130.1;Parent=gene-AO053_05935;Dbxref=NCBI_GP:TMQ38130.1;Name=TMQ38130.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44645.1;locus_tag=AO053_05935;product=molybdenum cofactor biosynthesis protein;protein_id=TMQ38130.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	39770	40126	.	-	.	ID=gene-AO053_05940;Name=AO053_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05940
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	39770	40126	.	-	0	ID=cds-TMQ38131.1;Parent=gene-AO053_05940;Dbxref=NCBI_GP:TMQ38131.1;Name=TMQ38131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44424.1;locus_tag=AO053_05940;product=diacylglycerol kinase;protein_id=TMQ38131.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	40141	42372	.	-	.	ID=gene-AO053_05945;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=AO053_05945
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	40141	42372	.	-	0	ID=cds-TMQ38132.1;Parent=gene-AO053_05945;Dbxref=NCBI_GP:TMQ38132.1;Name=TMQ38132.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647057.1;locus_tag=AO053_05945;product=(p)ppGpp synthetase;protein_id=TMQ38132.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	42450	43766	.	-	.	ID=gene-AO053_05950;Name=AO053_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05950
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	42450	43766	.	-	0	ID=cds-TMQ38133.1;Parent=gene-AO053_05950;Dbxref=NCBI_GP:TMQ38133.1;Name=TMQ38133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996152.1;locus_tag=AO053_05950;product=23S rRNA methyltransferase;protein_id=TMQ38133.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	43904	44173	.	+	.	ID=gene-AO053_05955;Name=AO053_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05955
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	43904	44173	.	+	0	ID=cds-TMQ38134.1;Parent=gene-AO053_05955;Dbxref=NCBI_GP:TMQ38134.1;Name=TMQ38134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525556.1;locus_tag=AO053_05955;product=antitoxin;protein_id=TMQ38134.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	44318	45436	.	-	.	ID=gene-AO053_05960;Name=AO053_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05960
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	44318	45436	.	-	0	ID=cds-TMQ38135.1;Parent=gene-AO053_05960;Dbxref=NCBI_GP:TMQ38135.1;Name=TMQ38135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996155.1;locus_tag=AO053_05960;product=fimbrial protein;protein_id=TMQ38135.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	45440	47950	.	-	.	ID=gene-AO053_05965;Name=AO053_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05965
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	45440	47950	.	-	0	ID=cds-TMQ38215.1;Parent=gene-AO053_05965;Dbxref=NCBI_GP:TMQ38215.1;Name=TMQ38215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525554.1;locus_tag=AO053_05965;product=usher protein;protein_id=TMQ38215.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	47993	48688	.	-	.	ID=gene-AO053_05970;Name=AO053_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05970
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	47993	48688	.	-	0	ID=cds-TMQ38136.1;Parent=gene-AO053_05970;Dbxref=NCBI_GP:TMQ38136.1;Name=TMQ38136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525553.1;locus_tag=AO053_05970;product=molecular chaperone;protein_id=TMQ38136.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	48783	49406	.	-	.	ID=gene-AO053_05975;Name=AO053_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05975
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	48783	49406	.	-	0	ID=cds-TMQ38137.1;Parent=gene-AO053_05975;Dbxref=NCBI_GP:TMQ38137.1;Name=TMQ38137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525552.1;locus_tag=AO053_05975;product=fimbrial protein;protein_id=TMQ38137.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	49547	50257	.	-	.	ID=gene-AO053_05980;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AO053_05980
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	49547	50257	.	-	0	ID=cds-TMQ38138.1;Parent=gene-AO053_05980;Dbxref=NCBI_GP:TMQ38138.1;Name=TMQ38138.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527492.1;locus_tag=AO053_05980;product=DNA repair protein RecO;protein_id=TMQ38138.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	50260	50664	.	-	.	ID=gene-AO053_05985;Name=AO053_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05985
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	50260	50664	.	-	0	ID=cds-TMQ38139.1;Parent=gene-AO053_05985;Dbxref=NCBI_GP:TMQ38139.1;Name=TMQ38139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701577.1;locus_tag=AO053_05985;product=Opacity-associated protein OapB;protein_id=TMQ38139.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	50723	52015	.	-	.	ID=gene-AO053_05990;Name=AO053_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05990
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	50723	52015	.	-	0	ID=cds-TMQ38140.1;Parent=gene-AO053_05990;Dbxref=NCBI_GP:TMQ38140.1;Name=TMQ38140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44415.1;locus_tag=AO053_05990;product=Opacity-associated protein OapA;protein_id=TMQ38140.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	52123	53139	.	-	.	ID=gene-AO053_05995;Name=AO053_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_05995
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	52123	53139	.	-	0	ID=cds-TMQ38141.1;Parent=gene-AO053_05995;Dbxref=NCBI_GP:TMQ38141.1;Name=TMQ38141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525548.1;locus_tag=AO053_05995;product=EF-P beta-lysylation protein EpmB;protein_id=TMQ38141.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	53177	53743	.	+	.	ID=gene-AO053_06000;Name=AO053_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06000
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	53177	53743	.	+	0	ID=cds-TMQ38142.1;Parent=gene-AO053_06000;Dbxref=NCBI_GP:TMQ38142.1;Name=TMQ38142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635150.1;locus_tag=AO053_06000;product=elongation factor P;protein_id=TMQ38142.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	53958	54047	.	+	.	ID=gene-AO053_06005;Name=AO053_06005;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06005
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	53958	54047	.	+	.	ID=rna-AO053_06005;Parent=gene-AO053_06005;anticodon=(pos:53992..53994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06005;product=tRNA-Ser
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	53958	54047	.	+	.	ID=exon-AO053_06005-1;Parent=rna-AO053_06005;anticodon=(pos:53992..53994);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06005;product=tRNA-Ser
GCA_005888185.1|LNKP01000069.1	Genbank	gene	54099	54689	.	-	.	ID=gene-AO053_06010;Name=AO053_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06010
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	54099	54689	.	-	0	ID=cds-TMQ38143.1;Parent=gene-AO053_06010;Dbxref=NCBI_GP:TMQ38143.1;Name=TMQ38143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525547.1;locus_tag=AO053_06010;product=ribonuclease T;protein_id=TMQ38143.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	54722	56074	.	-	.	ID=gene-AO053_06015;Name=AO053_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06015
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	54722	56074	.	-	0	ID=cds-TMQ38144.1;Parent=gene-AO053_06015;Dbxref=NCBI_GP:TMQ38144.1;Name=TMQ38144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649062.1;locus_tag=AO053_06015;product=sodium:proton antiporter;protein_id=TMQ38144.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	56388	57077	.	-	.	ID=gene-AO053_06020;Name=AO053_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06020
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	56388	57077	.	-	0	ID=cds-TMQ38145.1;Parent=gene-AO053_06020;Dbxref=NCBI_GP:TMQ38145.1;Name=TMQ38145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691801.1;locus_tag=AO053_06020;product=ribonuclease T;protein_id=TMQ38145.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	57151	57558	.	-	.	ID=gene-AO053_06025;Name=AO053_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06025
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	57151	57558	.	-	0	ID=cds-TMQ38146.1;Parent=gene-AO053_06025;Dbxref=NCBI_GP:TMQ38146.1;Name=TMQ38146.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996164.1;locus_tag=AO053_06025;product=glyoxalase I;protein_id=TMQ38146.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	57632	58357	.	-	.	ID=gene-AO053_06030;Name=AO053_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06030
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	57632	58357	.	-	0	ID=cds-TMQ38147.1;Parent=gene-AO053_06030;Dbxref=NCBI_GP:TMQ38147.1;Name=TMQ38147.1;Note=catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGD5.1;locus_tag=AO053_06030;product=tRNA (cmo5U34)-methyltransferase;protein_id=TMQ38147.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	58410	58928	.	-	.	ID=gene-AO053_06035;Name=AO053_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06035
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	58410	58928	.	-	0	ID=cds-TMQ38148.1;Parent=gene-AO053_06035;Dbxref=NCBI_GP:TMQ38148.1;Name=TMQ38148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656314.1;locus_tag=AO053_06035;product=hypothetical protein;protein_id=TMQ38148.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	59147	60913	.	+	.	ID=gene-AO053_06040;Name=AO053_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06040
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	59147	60913	.	+	0	ID=cds-TMQ38149.1;Parent=gene-AO053_06040;Dbxref=NCBI_GP:TMQ38149.1;Name=TMQ38149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688987.1;locus_tag=AO053_06040;product=aspartyl-tRNA synthetase;protein_id=TMQ38149.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	60935	61411	.	+	.	ID=gene-AO053_06045;Name=AO053_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06045
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	60935	61411	.	+	0	ID=cds-TMQ38150.1;Parent=gene-AO053_06045;Dbxref=NCBI_GP:TMQ38150.1;Name=TMQ38150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656312.1;locus_tag=AO053_06045;product=NUDIX pyrophosphatase;protein_id=TMQ38150.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	61571	62311	.	+	.	ID=gene-AO053_06050;Name=AO053_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06050
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	61571	62311	.	+	0	ID=cds-TMQ38151.1;Parent=gene-AO053_06050;Dbxref=NCBI_GP:TMQ38151.1;Name=TMQ38151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630070.1;locus_tag=AO053_06050;product=hypothetical protein;protein_id=TMQ38151.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	62358	62930	.	+	.	ID=gene-AO053_06055;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AO053_06055
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	62358	62930	.	+	0	ID=cds-TMQ38152.1;Parent=gene-AO053_06055;Dbxref=NCBI_GP:TMQ38152.1;Name=TMQ38152.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGD0.1;locus_tag=AO053_06055;product=Holliday junction resolvase;protein_id=TMQ38152.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	62993	63607	.	+	.	ID=gene-AO053_06060;Name=AO053_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06060
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	62993	63607	.	+	0	ID=cds-TMQ38153.1;Parent=gene-AO053_06060;Dbxref=NCBI_GP:TMQ38153.1;Name=TMQ38153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAH7.1;locus_tag=AO053_06060;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=TMQ38153.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	63615	64622	.	+	.	ID=gene-AO053_06065;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AO053_06065
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	63615	64622	.	+	0	ID=cds-TMQ38154.1;Parent=gene-AO053_06065;Dbxref=NCBI_GP:TMQ38154.1;Name=TMQ38154.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701568.1;locus_tag=AO053_06065;product=ATP-dependent DNA helicase RuvB;protein_id=TMQ38154.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	64674	64961	.	-	.	ID=gene-AO053_06070;Name=AO053_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06070
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	64674	64961	.	-	0	ID=cds-TMQ38155.1;Parent=gene-AO053_06070;Dbxref=NCBI_GP:TMQ38155.1;Name=TMQ38155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43982.1;locus_tag=AO053_06070;product=hypothetical protein;protein_id=TMQ38155.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	65134	66027	.	-	.	ID=gene-AO053_06075;Name=AO053_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06075
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	65134	66027	.	-	0	ID=cds-TMQ38156.1;Parent=gene-AO053_06075;Dbxref=NCBI_GP:TMQ38156.1;Name=TMQ38156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44630.1;locus_tag=AO053_06075;product=recombinase XerD;protein_id=TMQ38156.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	66058	67224	.	-	.	ID=gene-AO053_06080;Name=AO053_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06080
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	66058	67224	.	-	0	ID=cds-TMQ38157.1;Parent=gene-AO053_06080;Dbxref=NCBI_GP:TMQ38157.1;Name=TMQ38157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525539.1;locus_tag=AO053_06080;product=MFS transporter;protein_id=TMQ38157.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	67224	68039	.	-	.	ID=gene-AO053_06085;Name=AO053_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06085
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	67224	68039	.	-	0	ID=cds-TMQ38158.1;Parent=gene-AO053_06085;Dbxref=NCBI_GP:TMQ38158.1;Name=TMQ38158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668983.1;locus_tag=AO053_06085;product=pyrroline-5-carboxylate reductase;protein_id=TMQ38158.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	68105	69013	.	+	.	ID=gene-AO053_06090;Name=AO053_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06090
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	68105	69013	.	+	0	ID=cds-TMQ38159.1;Parent=gene-AO053_06090;Dbxref=NCBI_GP:TMQ38159.1;Name=TMQ38159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662977.1;locus_tag=AO053_06090;product=recombination-associated protein RdgC;protein_id=TMQ38159.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	69063	69482	.	-	.	ID=gene-AO053_06095;Name=AO053_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06095
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	69063	69482	.	-	0	ID=cds-TMQ38160.1;Parent=gene-AO053_06095;Dbxref=NCBI_GP:TMQ38160.1;Name=TMQ38160.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656295.1;locus_tag=AO053_06095;product=Holliday junction resolvase;protein_id=TMQ38160.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	69482	70042	.	-	.	ID=gene-AO053_06100;Name=AO053_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06100
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	69482	70042	.	-	0	ID=cds-TMQ38161.1;Parent=gene-AO053_06100;Dbxref=NCBI_GP:TMQ38161.1;Name=TMQ38161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996179.1;locus_tag=AO053_06100;product=hypothetical protein;protein_id=TMQ38161.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	70039	70776	.	-	.	ID=gene-AO053_06105;Name=AO053_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06105
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	70039	70776	.	-	0	ID=cds-TMQ38162.1;Parent=gene-AO053_06105;Dbxref=NCBI_GP:TMQ38162.1;Name=TMQ38162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44627.1;locus_tag=AO053_06105;product=16S rRNA methyltransferase;protein_id=TMQ38162.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	70826	72394	.	-	.	ID=gene-AO053_06110;Name=AO053_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06110
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	70826	72394	.	-	0	ID=cds-TMQ38163.1;Parent=gene-AO053_06110;Dbxref=NCBI_GP:TMQ38163.1;Name=TMQ38163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666677.1;locus_tag=AO053_06110;product=apolipoprotein N-acyltransferase;protein_id=TMQ38163.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	72378	73277	.	-	.	ID=gene-AO053_06115;Name=AO053_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06115
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	72378	73277	.	-	0	ID=cds-TMQ38164.1;Parent=gene-AO053_06115;Dbxref=NCBI_GP:TMQ38164.1;Name=TMQ38164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57368.1;locus_tag=AO053_06115;product=magnesium/cobalt efflux protein;protein_id=TMQ38164.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	73900	74460	.	-	.	ID=gene-AO053_06120;Name=AO053_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06120
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	73900	74460	.	-	0	ID=cds-TMQ38165.1;Parent=gene-AO053_06120;Dbxref=NCBI_GP:TMQ38165.1;Name=TMQ38165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550480.1;locus_tag=AO053_06120;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=TMQ38165.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	74575	75024	.	+	.	ID=gene-AO053_06125;Name=AO053_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06125
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	74575	75024	.	+	0	ID=cds-TMQ38166.1;Parent=gene-AO053_06125;Dbxref=NCBI_GP:TMQ38166.1;Name=TMQ38166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996184.1;locus_tag=AO053_06125;product=prepilin peptidase;protein_id=TMQ38166.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	75021	76415	.	+	.	ID=gene-AO053_06130;Name=AO053_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06130
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	75021	76415	.	+	0	ID=cds-TMQ38167.1;Parent=gene-AO053_06130;Dbxref=NCBI_GP:TMQ38167.1;Name=TMQ38167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656265.1;locus_tag=AO053_06130;product=protein transporter HofB;protein_id=TMQ38167.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	76412	77629	.	+	.	ID=gene-AO053_06135;Name=AO053_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06135
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	76412	77629	.	+	0	ID=cds-TMQ38168.1;Parent=gene-AO053_06135;Dbxref=NCBI_GP:TMQ38168.1;Name=TMQ38168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550481.1;locus_tag=AO053_06135;product=type II secretion system protein F;protein_id=TMQ38168.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	77626	78318	.	+	.	ID=gene-AO053_06140;Name=AO053_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06140
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	77626	78318	.	+	0	ID=cds-TMQ38169.1;Parent=gene-AO053_06140;Dbxref=NCBI_GP:TMQ38169.1;Name=TMQ38169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666688.1;locus_tag=AO053_06140;product=peptidase A24;protein_id=TMQ38169.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	78373	79635	.	-	.	ID=gene-AO053_06145;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AO053_06145
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	78373	79635	.	-	0	ID=cds-TMQ38170.1;Parent=gene-AO053_06145;Dbxref=NCBI_GP:TMQ38170.1;Name=TMQ38170.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668956.1;locus_tag=AO053_06145;product=transcription termination factor Rho;protein_id=TMQ38170.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	79883	80200	.	+	.	ID=gene-AO053_06150;Name=AO053_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06150
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	79883	80200	.	+	0	ID=cds-TMQ38171.1;Parent=gene-AO053_06150;Dbxref=NCBI_GP:TMQ38171.1;Name=TMQ38171.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44618.2;locus_tag=AO053_06150;product=transcriptional repressor protein MetJ;protein_id=TMQ38171.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	80214	80600	.	-	.	ID=gene-AO053_06155;Name=AO053_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06155
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	80214	80600	.	-	0	ID=cds-TMQ38172.1;Parent=gene-AO053_06155;Dbxref=NCBI_GP:TMQ38172.1;Name=TMQ38172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44617.1;locus_tag=AO053_06155;product=Cu(I)-responsive transcriptional regulator;protein_id=TMQ38172.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	80677	80883	.	+	.	ID=gene-AO053_06160;Name=AO053_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06160
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	80677	80883	.	+	0	ID=cds-TMQ38173.1;Parent=gene-AO053_06160;Dbxref=NCBI_GP:TMQ38173.1;Name=TMQ38173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640109.1;locus_tag=AO053_06160;product=hypothetical protein;protein_id=TMQ38173.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	80958	81164	.	+	.	ID=gene-AO053_06165;Name=AO053_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06165
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	80958	81164	.	+	0	ID=cds-TMQ38174.1;Parent=gene-AO053_06165;Dbxref=NCBI_GP:TMQ38174.1;Name=TMQ38174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640109.1;locus_tag=AO053_06165;product=hypothetical protein;protein_id=TMQ38174.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	81250	81456	.	+	.	ID=gene-AO053_06170;Name=AO053_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06170
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	81250	81456	.	+	0	ID=cds-TMQ38175.1;Parent=gene-AO053_06170;Dbxref=NCBI_GP:TMQ38175.1;Name=TMQ38175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640109.1;locus_tag=AO053_06170;product=hypothetical protein;protein_id=TMQ38175.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	81431	83599	.	+	.	ID=gene-AO053_06175;Name=AO053_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06175
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	81431	83599	.	+	0	ID=cds-TMQ38176.1;Parent=gene-AO053_06175;Dbxref=NCBI_GP:TMQ38176.1;Name=TMQ38176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996190.1;locus_tag=AO053_06175;product=copper-transporting ATPase;protein_id=TMQ38176.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	83822	85060	.	+	.	ID=gene-AO053_06180;Name=AO053_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06180
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	83822	85060	.	+	0	ID=cds-TMQ38177.1;Parent=gene-AO053_06180;Dbxref=NCBI_GP:TMQ38177.1;Name=TMQ38177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668945.1;locus_tag=AO053_06180;product=serine transporter;protein_id=TMQ38177.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	85095	86462	.	+	.	ID=gene-AO053_06185;Name=AO053_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06185
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	85095	86462	.	+	0	ID=cds-TMQ38178.1;Parent=gene-AO053_06185;Dbxref=NCBI_GP:TMQ38178.1;Name=TMQ38178.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525528.1;locus_tag=AO053_06185;product=serine dehydratase;protein_id=TMQ38178.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	86571	87827	.	-	.	ID=gene-AO053_06190;Name=AO053_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06190
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	86571	87827	.	-	0	ID=cds-TMQ38179.1;Parent=gene-AO053_06190;Dbxref=NCBI_GP:TMQ38179.1;Name=TMQ38179.1;Note=tryptophan transporter of high affinity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996193.1;locus_tag=AO053_06190;product=tryptophan permease;protein_id=TMQ38179.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	87944	89158	.	-	.	ID=gene-AO053_06195;Name=AO053_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06195
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	87944	89158	.	-	0	ID=cds-TMQ38180.1;Parent=gene-AO053_06195;Dbxref=NCBI_GP:TMQ38180.1;Name=TMQ38180.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271965.1;locus_tag=AO053_06195;product=aminotransferase;protein_id=TMQ38180.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	89112	89381	.	-	.	ID=gene-AO053_06200;Name=AO053_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06200
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	89112	89381	.	-	0	ID=cds-TMQ38216.1;Parent=gene-AO053_06200;Dbxref=NCBI_GP:TMQ38216.1;Name=TMQ38216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648936.1;locus_tag=AO053_06200;product=hypothetical protein;protein_id=TMQ38216.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	89315	90586	.	+	.	ID=gene-AO053_06205;Name=AO053_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06205
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	89315	90586	.	+	0	ID=cds-TMQ38217.1;Parent=gene-AO053_06205;Dbxref=NCBI_GP:TMQ38217.1;Name=TMQ38217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693020.1;locus_tag=AO053_06205;product=isochorismate synthase;protein_id=TMQ38217.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	90602	92308	.	+	.	ID=gene-AO053_06210;Name=AO053_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06210
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	90602	92308	.	+	0	ID=cds-TMQ38181.1;Parent=gene-AO053_06210;Dbxref=NCBI_GP:TMQ38181.1;Name=TMQ38181.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNQ7.1;locus_tag=AO053_06210;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=TMQ38181.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	92369	93112	.	+	.	ID=gene-AO053_06215;Name=AO053_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06215
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	92369	93112	.	+	0	ID=cds-TMQ38182.1;Parent=gene-AO053_06215;Dbxref=NCBI_GP:TMQ38182.1;Name=TMQ38182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701550.1;locus_tag=AO053_06215;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=TMQ38182.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	93168	94484	.	+	.	ID=gene-AO053_06220;Name=AO053_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06220
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	93168	94484	.	+	0	ID=cds-TMQ38183.1;Parent=gene-AO053_06220;Dbxref=NCBI_GP:TMQ38183.1;Name=TMQ38183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44610.1;locus_tag=AO053_06220;product=transporter;protein_id=TMQ38183.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	94709	95467	.	-	.	ID=gene-AO053_06225;Name=AO053_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06225
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	94709	95467	.	-	0	ID=cds-TMQ38184.1;Parent=gene-AO053_06225;Dbxref=NCBI_GP:TMQ38184.1;Name=TMQ38184.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43770.2;locus_tag=AO053_06225;product=uridine phosphorylase;protein_id=TMQ38184.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	95704	96366	.	+	.	ID=gene-AO053_06230;Name=AO053_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06230
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	95704	96366	.	+	0	ID=cds-TMQ38185.1;Parent=gene-AO053_06230;Dbxref=NCBI_GP:TMQ38185.1;Name=TMQ38185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701548.1;locus_tag=AO053_06230;product=molybdenum cofactor sulfurase;protein_id=TMQ38185.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	96369	96851	.	+	.	ID=gene-AO053_06235;Name=AO053_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06235
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	96369	96851	.	+	0	ID=cds-TMQ38186.1;Parent=gene-AO053_06235;Dbxref=NCBI_GP:TMQ38186.1;Name=TMQ38186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UG95.1;locus_tag=AO053_06235;product=preprotein translocase subunit SecA;protein_id=TMQ38186.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	96848	97657	.	+	.	ID=gene-AO053_06240;Name=AO053_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06240
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	96848	97657	.	+	0	ID=cds-TMQ38187.1;Parent=gene-AO053_06240;Dbxref=NCBI_GP:TMQ38187.1;Name=TMQ38187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44608.1;locus_tag=AO053_06240;product=hypothetical protein;protein_id=TMQ38187.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	97677	99332	.	-	.	ID=gene-AO053_06245;Name=AO053_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06245
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	97677	99332	.	-	0	ID=cds-TMQ38188.1;Parent=gene-AO053_06245;Dbxref=NCBI_GP:TMQ38188.1;Name=TMQ38188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668171.1;locus_tag=AO053_06245;product=hypothetical protein;protein_id=TMQ38188.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	99455	99530	.	-	.	ID=gene-AO053_06250;Name=AO053_06250;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06250
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	99455	99530	.	-	.	ID=rna-AO053_06250;Parent=gene-AO053_06250;anticodon=(pos:complement(99495..99497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06250;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	99455	99530	.	-	.	ID=exon-AO053_06250-1;Parent=rna-AO053_06250;anticodon=(pos:complement(99495..99497));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06250;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	Genbank	gene	99583	99658	.	-	.	ID=gene-AO053_06255;Name=AO053_06255;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06255
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	99583	99658	.	-	.	ID=rna-AO053_06255;Parent=gene-AO053_06255;anticodon=(pos:complement(99623..99625));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06255;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	99583	99658	.	-	.	ID=exon-AO053_06255-1;Parent=rna-AO053_06255;anticodon=(pos:complement(99623..99625));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06255;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	Genbank	gene	99717	99792	.	-	.	ID=gene-AO053_06260;Name=AO053_06260;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06260
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	99717	99792	.	-	.	ID=rna-AO053_06260;Parent=gene-AO053_06260;anticodon=(pos:complement(99757..99759));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06260;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	99717	99792	.	-	.	ID=exon-AO053_06260-1;Parent=rna-AO053_06260;anticodon=(pos:complement(99757..99759));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06260;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	Genbank	gene	99836	99911	.	-	.	ID=gene-AO053_06265;Name=AO053_06265;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06265
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	99836	99911	.	-	.	ID=rna-AO053_06265;Parent=gene-AO053_06265;anticodon=(pos:complement(99876..99878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06265;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	99836	99911	.	-	.	ID=exon-AO053_06265-1;Parent=rna-AO053_06265;anticodon=(pos:complement(99876..99878));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06265;product=tRNA-Val
GCA_005888185.1|LNKP01000069.1	Genbank	gene	100082	101524	.	+	.	ID=gene-AO053_06270;Name=AO053_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06270
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	100082	101524	.	+	0	ID=cds-TMQ38189.1;Parent=gene-AO053_06270;Dbxref=NCBI_GP:TMQ38189.1;Name=TMQ38189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525518.1;locus_tag=AO053_06270;product=glutamyl-tRNA synthetase;protein_id=TMQ38189.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	101605	101680	.	+	.	ID=gene-AO053_06275;Name=AO053_06275;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06275
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	101605	101680	.	+	.	ID=rna-AO053_06275;Parent=gene-AO053_06275;anticodon=(pos:101638..101640);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06275;product=tRNA-Ala
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	101605	101680	.	+	.	ID=exon-AO053_06275-1;Parent=rna-AO053_06275;anticodon=(pos:101638..101640);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06275;product=tRNA-Ala
GCA_005888185.1|LNKP01000069.1	Genbank	gene	101817	102533	.	+	.	ID=gene-AO053_06280;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=AO053_06280
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	101817	102533	.	+	0	ID=cds-TMQ38190.1;Parent=gene-AO053_06280;Dbxref=NCBI_GP:TMQ38190.1;Name=TMQ38190.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668175.1;locus_tag=AO053_06280;product=ribonuclease PH;protein_id=TMQ38190.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	102557	103198	.	+	.	ID=gene-AO053_06285;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AO053_06285
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	102557	103198	.	+	0	ID=cds-TMQ38191.1;Parent=gene-AO053_06285;Dbxref=NCBI_GP:TMQ38191.1;Name=TMQ38191.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:SwissProt:P43855.1;locus_tag=AO053_06285;product=orotate phosphoribosyltransferase;protein_id=TMQ38191.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	103277	104143	.	+	.	ID=gene-AO053_06290;Name=AO053_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06290
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	103277	104143	.	+	0	ID=cds-TMQ38192.1;Parent=gene-AO053_06290;Dbxref=NCBI_GP:TMQ38192.1;Name=TMQ38192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686695.1;locus_tag=AO053_06290;product=molecular chaperone DjlA;protein_id=TMQ38192.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	104143	105075	.	+	.	ID=gene-AO053_06295;Name=AO053_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06295
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	104143	105075	.	+	0	ID=cds-TMQ38193.1;Parent=gene-AO053_06295;Dbxref=NCBI_GP:TMQ38193.1;Name=TMQ38193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636322.1;locus_tag=AO053_06295;product=tRNA-dihydrouridine synthase C;protein_id=TMQ38193.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	105115	105960	.	-	.	ID=gene-AO053_06300;Name=AO053_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06300
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	105115	105960	.	-	0	ID=cds-TMQ38194.1;Parent=gene-AO053_06300;Dbxref=NCBI_GP:TMQ38194.1;Name=TMQ38194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653377.1;locus_tag=AO053_06300;product=RNA polymerase factor sigma-32;protein_id=TMQ38194.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	106086	107111	.	-	.	ID=gene-AO053_06305;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AO053_06305
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	106086	107111	.	-	0	ID=cds-TMQ38195.1;Parent=gene-AO053_06305;Dbxref=NCBI_GP:TMQ38195.1;Name=TMQ38195.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668187.1;locus_tag=AO053_06305;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=TMQ38195.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	107121	108824	.	-	.	ID=gene-AO053_06310;Name=AO053_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06310
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	107121	108824	.	-	0	ID=cds-TMQ38196.1;Parent=gene-AO053_06310;Dbxref=NCBI_GP:TMQ38196.1;Name=TMQ38196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527503.1;locus_tag=AO053_06310;product=ATPase;protein_id=TMQ38196.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	108866	109465	.	-	.	ID=gene-AO053_06315;Name=AO053_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06315
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	108866	109465	.	-	0	ID=cds-TMQ38197.1;Parent=gene-AO053_06315;Dbxref=NCBI_GP:TMQ38197.1;Name=TMQ38197.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44603.1;locus_tag=AO053_06315;product=glycerol-3-phosphate acyltransferase;protein_id=TMQ38197.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	109548	109904	.	+	.	ID=gene-AO053_06320;Name=AO053_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06320
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	109548	109904	.	+	0	ID=cds-TMQ38198.1;Parent=gene-AO053_06320;Dbxref=NCBI_GP:TMQ38198.1;Name=TMQ38198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689448.1;locus_tag=AO053_06320;product=dihydroneopterin aldolase;protein_id=TMQ38198.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	110000	112801	.	-	.	ID=gene-AO053_06325;Name=AO053_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06325
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	110000	112801	.	-	0	ID=cds-TMQ38199.1;Parent=gene-AO053_06325;Dbxref=NCBI_GP:TMQ38199.1;Name=TMQ38199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525513.1;locus_tag=AO053_06325;product=heme transporter CcmD;protein_id=TMQ38199.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	112813	114510	.	-	.	ID=gene-AO053_06330;Name=AO053_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06330
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	112813	114510	.	-	0	ID=cds-TMQ38200.1;Parent=gene-AO053_06330;Dbxref=NCBI_GP:TMQ38200.1;Name=TMQ38200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996213.1;locus_tag=AO053_06330;product=heme transporter CcmD;protein_id=TMQ38200.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	114586	116751	.	-	.	ID=gene-AO053_06335;Name=AO053_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06335
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	114586	116751	.	-	0	ID=cds-TMQ38201.1;Parent=gene-AO053_06335;Dbxref=NCBI_GP:TMQ38201.1;Name=TMQ38201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525511.1;locus_tag=AO053_06335;product=ligand-gated channel;protein_id=TMQ38201.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	117074	118117	.	-	.	ID=gene-AO053_06340;Name=AO053_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06340
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	117074	118117	.	-	0	ID=cds-TMQ38202.1;Parent=gene-AO053_06340;Dbxref=NCBI_GP:TMQ38202.1;Name=TMQ38202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701483.1;locus_tag=AO053_06340;product=glycosyl transferase;protein_id=TMQ38202.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	118194	118919	.	+	.	ID=gene-AO053_06345;Name=AO053_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06345
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	118194	118919	.	+	0	ID=cds-TMQ38203.1;Parent=gene-AO053_06345;Dbxref=NCBI_GP:TMQ38203.1;Name=TMQ38203.1;Note=catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689436.1;locus_tag=AO053_06345;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=TMQ38203.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	118931	119518	.	+	.	ID=gene-AO053_06350;Name=AO053_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06350
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	118931	119518	.	+	0	ID=cds-TMQ38204.1;Parent=gene-AO053_06350;Dbxref=NCBI_GP:TMQ38204.1;Name=TMQ38204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656195.1;locus_tag=AO053_06350;product=non-canonical purine NTP pyrophosphatase;protein_id=TMQ38204.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	119674	120570	.	+	.	ID=gene-AO053_06355;Name=AO053_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06355
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	119674	120570	.	+	0	ID=cds-TMQ38205.1;Parent=gene-AO053_06355;Dbxref=NCBI_GP:TMQ38205.1;Name=TMQ38205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692194.1;locus_tag=AO053_06355;product=glycosyl transferase;protein_id=TMQ38205.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	120754	120843	.	+	.	ID=gene-AO053_06360;Name=AO053_06360;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06360
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	tRNA	120754	120843	.	+	.	ID=rna-AO053_06360;Parent=gene-AO053_06360;anticodon=(pos:120788..120790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06360;product=tRNA-Ser
GCA_005888185.1|LNKP01000069.1	tRNAscan-SE	exon	120754	120843	.	+	.	ID=exon-AO053_06360-1;Parent=rna-AO053_06360;anticodon=(pos:120788..120790);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06360;product=tRNA-Ser
GCA_005888185.1|LNKP01000069.1	Genbank	gene	121273	121596	.	-	.	ID=gene-AO053_06365;Name=AO053_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06365
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	121273	121596	.	-	0	ID=cds-TMQ38206.1;Parent=gene-AO053_06365;Dbxref=NCBI_GP:TMQ38206.1;Name=TMQ38206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054908.1;locus_tag=AO053_06365;product=ribosome-associated inhibitor A;protein_id=TMQ38206.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	121766	122413	.	-	.	ID=gene-AO053_06370;Name=AO053_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06370
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	121766	122413	.	-	0	ID=cds-TMQ38207.1;Parent=gene-AO053_06370;Dbxref=NCBI_GP:TMQ38207.1;Name=TMQ38207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43973.1;locus_tag=AO053_06370;product=outer membrane assembly protein BamC;protein_id=TMQ38207.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	122524	123420	.	-	.	ID=gene-AO053_06375;Name=AO053_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06375
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	122524	123420	.	-	0	ID=cds-TMQ38208.1;Parent=gene-AO053_06375;Dbxref=NCBI_GP:TMQ38208.1;Name=TMQ38208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996219.1;locus_tag=AO053_06375;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=TMQ38208.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	123526	123993	.	+	.	ID=gene-AO053_06380;Name=AO053_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06380
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	123526	123993	.	+	0	ID=cds-TMQ38209.1;Parent=gene-AO053_06380;Dbxref=NCBI_GP:TMQ38209.1;Name=TMQ38209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500839.1;locus_tag=AO053_06380;product=bacterioferritin comigratory protein;protein_id=TMQ38209.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	124162	124614	.	+	.	ID=gene-AO053_06385;Name=AO053_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06385
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	124162	124614	.	+	0	ID=cds-TMQ38210.1;Parent=gene-AO053_06385;Dbxref=NCBI_GP:TMQ38210.1;Name=TMQ38210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653401.1;locus_tag=AO053_06385;product=energy transducer TonB;protein_id=TMQ38210.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	124618	125061	.	+	.	ID=gene-AO053_06390;Name=AO053_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06390
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	124618	125061	.	+	0	ID=cds-TMQ38211.1;Parent=gene-AO053_06390;Dbxref=NCBI_GP:TMQ38211.1;Name=TMQ38211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656183.1;locus_tag=AO053_06390;product=biopolymer transporter ExbD;protein_id=TMQ38211.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	125071	125853	.	+	.	ID=gene-AO053_06395;Name=AO053_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06395
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	125071	125853	.	+	0	ID=cds-TMQ38212.1;Parent=gene-AO053_06395;Dbxref=NCBI_GP:TMQ38212.1;Name=TMQ38212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996220.1;locus_tag=AO053_06395;product=energy transducer TonB;protein_id=TMQ38212.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	126031	126537	.	-	.	ID=gene-AO053_06400;Name=AO053_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06400
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	126031	126537	.	-	0	ID=cds-TMQ38213.1;Parent=gene-AO053_06400;Dbxref=NCBI_GP:TMQ38213.1;Name=TMQ38213.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686675.1;locus_tag=AO053_06400;product=single-stranded DNA-binding protein;protein_id=TMQ38213.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Genbank	gene	126691	129522	.	+	.	ID=gene-AO053_06405;Name=AO053_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06405
GCA_005888185.1|LNKP01000069.1	Protein Homology	CDS	126691	129522	.	+	0	ID=cds-TMQ38214.1;Parent=gene-AO053_06405;Dbxref=NCBI_GP:TMQ38214.1;Name=TMQ38214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44410.1;locus_tag=AO053_06405;product=ABC-ATPase UvrA;protein_id=TMQ38214.1;transl_table=11
GCA_005888185.1|LNKP01000069.1	Protein Homology	pseudogene	129863	133167	.	+	.	ID=gene-AO053_06410;Name=AO053_06410;Note=disrupted;description=S-adenosylmethionine tRNA ribosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06410;pseudo=true
##sequence-region LNKP01000070.1 1 3608
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000070.1	Genbank	region	1	3608	.	+	.	ID=LNKP01000070.1:1..3608;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000070.1	Genbank	pseudogene	1	676	.	+	.	ID=gene-AO053_06415;Name=AO053_06415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06415;pseudo=true
GCA_005888185.1|LNKP01000070.1	Protein Homology	CDS	1	676	.	+	1	ID=cds-AO053_06415;Parent=gene-AO053_06415;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996225.1;locus_tag=AO053_06415;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000070.1	Genbank	gene	815	1261	.	+	.	ID=gene-AO053_06420;Name=AO053_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06420
GCA_005888185.1|LNKP01000070.1	Protein Homology	CDS	815	1261	.	+	0	ID=cds-TMQ38030.1;Parent=gene-AO053_06420;Dbxref=NCBI_GP:TMQ38030.1;Name=TMQ38030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653406.1;locus_tag=AO053_06420;product=hypothetical protein;protein_id=TMQ38030.1;transl_table=11
GCA_005888185.1|LNKP01000070.1	Genbank	gene	1385	2476	.	+	.	ID=gene-AO053_06425;Name=AO053_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06425
GCA_005888185.1|LNKP01000070.1	Protein Homology	CDS	1385	2476	.	+	0	ID=cds-TMQ38031.1;Parent=gene-AO053_06425;Dbxref=NCBI_GP:TMQ38031.1;Name=TMQ38031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAP2.1;locus_tag=AO053_06425;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=TMQ38031.1;transl_table=11
GCA_005888185.1|LNKP01000070.1	Genbank	pseudogene	2820	3608	.	+	.	ID=gene-AO053_06430;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=AO053_06430;pseudo=true
GCA_005888185.1|LNKP01000070.1	Protein Homology	CDS	2820	3608	.	+	0	ID=cds-AO053_06430;Parent=gene-AO053_06430;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626734.1;locus_tag=AO053_06430;pseudo=true;transl_table=11
##sequence-region LNKP01000071.1 1 20859
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000071.1	Genbank	region	1	20859	.	+	.	ID=LNKP01000071.1:1..20859;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000071.1	Genbank	pseudogene	1	291	.	+	.	ID=gene-AO053_06435;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=AO053_06435;pseudo=true
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	1	291	.	+	0	ID=cds-AO053_06435;Parent=gene-AO053_06435;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626734.1;locus_tag=AO053_06435;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	381	3569	.	+	.	ID=gene-AO053_06440;Name=AO053_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06440
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	381	3569	.	+	0	ID=cds-TMQ37947.1;Parent=gene-AO053_06440;Dbxref=NCBI_GP:TMQ37947.1;Name=TMQ37947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527510.1;locus_tag=AO053_06440;product=DNA methyltransferase;protein_id=TMQ37947.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	3661	4143	.	+	.	ID=gene-AO053_06445;Name=AO053_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06445
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	3661	4143	.	+	0	ID=cds-TMQ37963.1;Parent=gene-AO053_06445;Dbxref=NCBI_GP:TMQ37963.1;Name=TMQ37963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525499.1;locus_tag=AO053_06445;product=restriction endonuclease;protein_id=TMQ37963.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	4170	4688	.	+	.	ID=gene-AO053_06450;Name=AO053_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06450
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	4170	4688	.	+	0	ID=cds-TMQ37948.1;Parent=gene-AO053_06450;Dbxref=NCBI_GP:TMQ37948.1;Name=TMQ37948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43971.1;locus_tag=AO053_06450;product=hypothetical protein;protein_id=TMQ37948.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	4685	4906	.	+	.	ID=gene-AO053_06455;Name=AO053_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06455
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	4685	4906	.	+	0	ID=cds-TMQ37949.1;Parent=gene-AO053_06455;Dbxref=NCBI_GP:TMQ37949.1;Name=TMQ37949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44593.1;locus_tag=AO053_06455;product=hypothetical protein;protein_id=TMQ37949.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	5014	5307	.	+	.	ID=gene-AO053_06460;Name=AO053_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06460
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	5014	5307	.	+	0	ID=cds-TMQ37950.1;Parent=gene-AO053_06460;Dbxref=NCBI_GP:TMQ37950.1;Name=TMQ37950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626741.1;locus_tag=AO053_06460;product=preprotein translocase subunit YajC;protein_id=TMQ37950.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	5377	7227	.	+	.	ID=gene-AO053_06465;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AO053_06465
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	5377	7227	.	+	0	ID=cds-TMQ37951.1;Parent=gene-AO053_06465;Dbxref=NCBI_GP:TMQ37951.1;Name=TMQ37951.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525496.1;locus_tag=AO053_06465;product=preprotein translocase subunit SecD;protein_id=TMQ37951.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	7238	8212	.	+	.	ID=gene-AO053_06470;Name=AO053_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06470
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	7238	8212	.	+	0	ID=cds-TMQ37952.1;Parent=gene-AO053_06470;Dbxref=NCBI_GP:TMQ37952.1;Name=TMQ37952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44590.1;locus_tag=AO053_06470;product=preprotein translocase subunit SecF;protein_id=TMQ37952.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	8327	9376	.	-	.	ID=gene-AO053_06475;Name=AO053_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06475
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	8327	9376	.	-	0	ID=cds-TMQ37953.1;Parent=gene-AO053_06475;Dbxref=NCBI_GP:TMQ37953.1;Name=TMQ37953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500144.1;locus_tag=AO053_06475;product=permease;protein_id=TMQ37953.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	9454	9804	.	+	.	ID=gene-AO053_06480;Name=AO053_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06480
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	9454	9804	.	+	0	ID=cds-TMQ37954.1;Parent=gene-AO053_06480;Dbxref=NCBI_GP:TMQ37954.1;Name=TMQ37954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634412.1;locus_tag=AO053_06480;product=arsenate reductase;protein_id=TMQ37954.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	9872	10117	.	+	.	ID=gene-AO053_06485;Name=AO053_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06485
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	9872	10117	.	+	0	ID=cds-TMQ37955.1;Parent=gene-AO053_06485;Dbxref=NCBI_GP:TMQ37955.1;Name=TMQ37955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701471.1;locus_tag=AO053_06485;product=Alternative ribosome-rescue factor A;protein_id=TMQ37955.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	10136	10432	.	+	.	ID=gene-AO053_06490;Name=AO053_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06490
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	10136	10432	.	+	0	ID=cds-TMQ37956.1;Parent=gene-AO053_06490;Dbxref=NCBI_GP:TMQ37956.1;Name=TMQ37956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648811.1;locus_tag=AO053_06490;product=dithiol-disulfide isomerase;protein_id=TMQ37956.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	10723	12171	.	-	.	ID=gene-AO053_06495;Name=AO053_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06495
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	10723	12171	.	-	0	ID=cds-TMQ37957.1;Parent=gene-AO053_06495;Dbxref=NCBI_GP:TMQ37957.1;Name=TMQ37957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525495.1;locus_tag=AO053_06495;product=murein transglycosylase;protein_id=TMQ37957.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	12289	14130	.	-	.	ID=gene-AO053_06500;Name=AO053_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06500
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	12289	14130	.	-	0	ID=cds-TMQ37958.1;Parent=gene-AO053_06500;Dbxref=NCBI_GP:TMQ37958.1;Name=TMQ37958.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996239.1;locus_tag=AO053_06500;product=DEAD/DEAH box helicase;protein_id=TMQ37958.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	14250	15194	.	-	.	ID=gene-AO053_06505;Name=AO053_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06505
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	14250	15194	.	-	0	ID=cds-TMQ37959.1;Parent=gene-AO053_06505;Dbxref=NCBI_GP:TMQ37959.1;Name=TMQ37959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638902.1;locus_tag=AO053_06505;product=lipoprotein NlpI-like protein;protein_id=TMQ37959.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	15276	17405	.	-	.	ID=gene-AO053_06510;Name=AO053_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06510
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	15276	17405	.	-	0	ID=cds-TMQ37960.1;Parent=gene-AO053_06510;Dbxref=NCBI_GP:TMQ37960.1;Name=TMQ37960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634398.1;locus_tag=AO053_06510;product=polyribonucleotide nucleotidyltransferase;protein_id=TMQ37960.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	17678	18559	.	+	.	ID=gene-AO053_06515;Name=AO053_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06515
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	17678	18559	.	+	0	ID=cds-TMQ37961.1;Parent=gene-AO053_06515;Dbxref=NCBI_GP:TMQ37961.1;Name=TMQ37961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527515.1;locus_tag=AO053_06515;product=glycosyl transferase family 8;protein_id=TMQ37961.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	18635	19102	.	+	.	ID=gene-AO053_06520;Name=AO053_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06520
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	18635	19102	.	+	0	ID=cds-TMQ37962.1;Parent=gene-AO053_06520;Dbxref=NCBI_GP:TMQ37962.1;Name=TMQ37962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996243.1;locus_tag=AO053_06520;product=hypothetical protein;protein_id=TMQ37962.1;transl_table=11
GCA_005888185.1|LNKP01000071.1	Genbank	gene	19210	20520	.	-	.	ID=gene-AO053_06525;Name=AO053_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06525
GCA_005888185.1|LNKP01000071.1	Protein Homology	CDS	19210	20520	.	-	0	ID=cds-TMQ37964.1;Parent=gene-AO053_06525;Dbxref=NCBI_GP:TMQ37964.1;Name=TMQ37964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527517.1;locus_tag=AO053_06525;product=branched-chain amino acid transporter;protein_id=TMQ37964.1;transl_table=11
##sequence-region LNKP01000072.1 1 6930
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000072.1	Genbank	region	1	6930	.	+	.	ID=LNKP01000072.1:1..6930;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000072.1	Genbank	gene	1	1047	.	+	.	ID=gene-AO053_06530;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=AO053_06530;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000072.1	Protein Homology	CDS	1	1047	.	+	0	ID=cds-TMQ37918.1;Parent=gene-AO053_06530;Dbxref=NCBI_GP:TMQ37918.1;Name=TMQ37918.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668235.1;locus_tag=AO053_06530;partial=true;product=sodium:proton antiporter;protein_id=TMQ37918.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000072.1	Genbank	gene	1086	1547	.	-	.	ID=gene-AO053_06535;Name=AO053_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06535
GCA_005888185.1|LNKP01000072.1	Protein Homology	CDS	1086	1547	.	-	0	ID=cds-TMQ37919.1;Parent=gene-AO053_06535;Dbxref=NCBI_GP:TMQ37919.1;Name=TMQ37919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648788.1;locus_tag=AO053_06535;product=AsnC family transcriptional regulator;protein_id=TMQ37919.1;transl_table=11
GCA_005888185.1|LNKP01000072.1	Genbank	gene	1667	2557	.	+	.	ID=gene-AO053_06540;Name=AO053_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06540
GCA_005888185.1|LNKP01000072.1	Protein Homology	CDS	1667	2557	.	+	0	ID=cds-TMQ37920.1;Parent=gene-AO053_06540;Dbxref=NCBI_GP:TMQ37920.1;Name=TMQ37920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701460.1;locus_tag=AO053_06540;product=transporter;protein_id=TMQ37920.1;transl_table=11
GCA_005888185.1|LNKP01000072.1	Genbank	gene	2619	4190	.	-	.	ID=gene-AO053_06545;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AO053_06545
GCA_005888185.1|LNKP01000072.1	Protein Homology	CDS	2619	4190	.	-	0	ID=cds-TMQ37921.1;Parent=gene-AO053_06545;Dbxref=NCBI_GP:TMQ37921.1;Name=TMQ37921.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550523.1;locus_tag=AO053_06545;product=GMP synthetase;protein_id=TMQ37921.1;transl_table=11
GCA_005888185.1|LNKP01000072.1	Genbank	gene	4300	5766	.	-	.	ID=gene-AO053_06550;Name=AO053_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06550
GCA_005888185.1|LNKP01000072.1	Protein Homology	CDS	4300	5766	.	-	0	ID=cds-TMQ37922.1;Parent=gene-AO053_06550;Dbxref=NCBI_GP:TMQ37922.1;Name=TMQ37922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44334.1;locus_tag=AO053_06550;product=guanosine monophosphate reductase;protein_id=TMQ37922.1;transl_table=11
GCA_005888185.1|LNKP01000072.1	Genbank	gene	5896	6801	.	+	.	ID=gene-AO053_06555;Name=AO053_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06555
GCA_005888185.1|LNKP01000072.1	Protein Homology	CDS	5896	6801	.	+	0	ID=cds-TMQ37923.1;Parent=gene-AO053_06555;Dbxref=NCBI_GP:TMQ37923.1;Name=TMQ37923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961768.1;locus_tag=AO053_06555;product=bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] ligase;protein_id=TMQ37923.1;transl_table=11
##sequence-region LNKP01000073.1 1 1390
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000073.1	Genbank	region	1	1390	.	+	.	ID=LNKP01000073.1:1..1390;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000073.1	Genbank	pseudogene	1	1390	.	+	.	ID=gene-AO053_06560;Name=AO053_06560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06560;pseudo=true
GCA_005888185.1|LNKP01000073.1	Protein Homology	CDS	1	1390	.	+	1	ID=cds-AO053_06560;Parent=gene-AO053_06560;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525784.1;locus_tag=AO053_06560;pseudo=true;transl_table=11
##sequence-region LNKP01000074.1 1 2546
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000074.1	Genbank	region	1	2546	.	+	.	ID=LNKP01000074.1:1..2546;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000074.1	Genbank	pseudogene	1	152	.	+	.	ID=gene-AO053_06565;Name=AO053_06565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06565;pseudo=true
GCA_005888185.1|LNKP01000074.1	Protein Homology	CDS	1	152	.	+	2	ID=cds-AO053_06565;Parent=gene-AO053_06565;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659026.1;locus_tag=AO053_06565;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000074.1	Genbank	gene	328	447	.	+	.	ID=gene-AO053_06570;Name=AO053_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06570
GCA_005888185.1|LNKP01000074.1	Protein Homology	CDS	328	447	.	+	0	ID=cds-TMQ37903.1;Parent=gene-AO053_06570;Dbxref=NCBI_GP:TMQ37903.1;Name=TMQ37903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640690.1;locus_tag=AO053_06570;product=hypothetical protein;protein_id=TMQ37903.1;transl_table=11
GCA_005888185.1|LNKP01000074.1	Genbank	gene	504	1349	.	+	.	ID=gene-AO053_06575;Name=AO053_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06575
GCA_005888185.1|LNKP01000074.1	Protein Homology	CDS	504	1349	.	+	0	ID=cds-TMQ37904.1;Parent=gene-AO053_06575;Dbxref=NCBI_GP:TMQ37904.1;Name=TMQ37904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995342.1;locus_tag=AO053_06575;product=hypothetical protein;protein_id=TMQ37904.1;transl_table=11
GCA_005888185.1|LNKP01000074.1	Genbank	gene	1389	1652	.	-	.	ID=gene-AO053_06580;Name=AO053_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06580
GCA_005888185.1|LNKP01000074.1	Protein Homology	CDS	1389	1652	.	-	0	ID=cds-TMQ37905.1;Parent=gene-AO053_06580;Dbxref=NCBI_GP:TMQ37905.1;Name=TMQ37905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272529.1;locus_tag=AO053_06580;product=hypothetical protein;protein_id=TMQ37905.1;transl_table=11
GCA_005888185.1|LNKP01000074.1	Genbank	gene	1858	2205	.	-	.	ID=gene-AO053_06585;Name=AO053_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06585
GCA_005888185.1|LNKP01000074.1	GeneMarkS+	CDS	1858	2205	.	-	0	ID=cds-TMQ37906.1;Parent=gene-AO053_06585;Dbxref=NCBI_GP:TMQ37906.1;Name=TMQ37906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_06585;product=hypothetical protein;protein_id=TMQ37906.1;transl_table=11
##sequence-region LNKP01000075.1 1 1278
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000075.1	Genbank	region	1	1278	.	+	.	ID=LNKP01000075.1:1..1278;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000075.1	Genbank	gene	1	1277	.	-	.	ID=gene-AO053_06590;Name=AO053_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06590;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000075.1	Protein Homology	CDS	1	1277	.	-	0	ID=cds-TMQ37883.1;Parent=gene-AO053_06590;Dbxref=NCBI_GP:TMQ37883.1;Name=TMQ37883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692124.1;locus_tag=AO053_06590;partial=true;product=sensor protein QseC;protein_id=TMQ37883.1;start_range=.,1;transl_table=11
##sequence-region LNKP01000076.1 1 14298
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000076.1	Genbank	region	1	14298	.	+	.	ID=LNKP01000076.1:1..14298;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000076.1	Genbank	gene	23	685	.	-	.	ID=gene-AO053_06595;Name=AO053_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06595
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	23	685	.	-	0	ID=cds-TMQ37832.1;Parent=gene-AO053_06595;Dbxref=NCBI_GP:TMQ37832.1;Name=TMQ37832.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525642.1;locus_tag=AO053_06595;product=two-component system response regulator;protein_id=TMQ37832.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	749	1114	.	-	.	ID=gene-AO053_06600;Name=AO053_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06600
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	749	1114	.	-	0	ID=cds-TMQ37833.1;Parent=gene-AO053_06600;Dbxref=NCBI_GP:TMQ37833.1;Name=TMQ37833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995783.1;locus_tag=AO053_06600;product=hypothetical protein;protein_id=TMQ37833.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	1264	1431	.	-	.	ID=gene-AO053_06605;Name=AO053_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06605
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	1264	1431	.	-	0	ID=cds-TMQ37834.1;Parent=gene-AO053_06605;Dbxref=NCBI_GP:TMQ37834.1;Name=TMQ37834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995782.1;locus_tag=AO053_06605;product=leucyl aminopeptidase;protein_id=TMQ37834.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	1615	2115	.	-	.	ID=gene-AO053_06610;Name=AO053_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06610
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	1615	2115	.	-	0	ID=cds-TMQ37835.1;Parent=gene-AO053_06610;Dbxref=NCBI_GP:TMQ37835.1;Name=TMQ37835.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688036.1;locus_tag=AO053_06610;product=PTS glucose transporter subunit IIA;protein_id=TMQ37835.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	2175	3902	.	-	.	ID=gene-AO053_06615;Name=AO053_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06615
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	2175	3902	.	-	0	ID=cds-TMQ37836.1;Parent=gene-AO053_06615;Dbxref=NCBI_GP:TMQ37836.1;Name=TMQ37836.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654342.1;locus_tag=AO053_06615;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=TMQ37836.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	3982	4239	.	-	.	ID=gene-AO053_06620;Name=AO053_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06620
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	3982	4239	.	-	0	ID=cds-TMQ37837.1;Parent=gene-AO053_06620;Dbxref=NCBI_GP:TMQ37837.1;Name=TMQ37837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43921.1;locus_tag=AO053_06620;product=PTS sugar transporter;protein_id=TMQ37837.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	4398	5438	.	-	.	ID=gene-AO053_06625;Name=AO053_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06625
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	4398	5438	.	-	0	ID=cds-TMQ37838.1;Parent=gene-AO053_06625;Dbxref=NCBI_GP:TMQ37838.1;Name=TMQ37838.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649964.1;locus_tag=AO053_06625;product=GTPase RsgA;protein_id=TMQ37838.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	5509	6057	.	+	.	ID=gene-AO053_06630;Name=AO053_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06630
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	5509	6057	.	+	0	ID=cds-TMQ37839.1;Parent=gene-AO053_06630;Dbxref=NCBI_GP:TMQ37839.1;Name=TMQ37839.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664903.1;locus_tag=AO053_06630;product=oligoribonuclease;protein_id=TMQ37839.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	6151	6226	.	+	.	ID=gene-AO053_06635;Name=AO053_06635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_06635
GCA_005888185.1|LNKP01000076.1	tRNAscan-SE	tRNA	6151	6226	.	+	.	ID=rna-AO053_06635;Parent=gene-AO053_06635;anticodon=(pos:6184..6186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06635;product=tRNA-Gly
GCA_005888185.1|LNKP01000076.1	tRNAscan-SE	exon	6151	6226	.	+	.	ID=exon-AO053_06635-1;Parent=rna-AO053_06635;anticodon=(pos:6184..6186);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_06635;product=tRNA-Gly
GCA_005888185.1|LNKP01000076.1	Genbank	gene	6363	7430	.	-	.	ID=gene-AO053_06640;Name=AO053_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06640
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	6363	7430	.	-	0	ID=cds-TMQ37840.1;Parent=gene-AO053_06640;Dbxref=NCBI_GP:TMQ37840.1;Name=TMQ37840.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688044.1;locus_tag=AO053_06640;product=UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase;protein_id=TMQ37840.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	7505	10096	.	-	.	ID=gene-AO053_06645;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=AO053_06645
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	7505	10096	.	-	0	ID=cds-TMQ37841.1;Parent=gene-AO053_06645;Dbxref=NCBI_GP:TMQ37841.1;Name=TMQ37841.1;gbkey=CDS;gene=glnD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500974.1;locus_tag=AO053_06645;product=bifunctional uridylyltransferase/uridylyl-removing protein;protein_id=TMQ37841.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	10190	10996	.	-	.	ID=gene-AO053_06650;Name=AO053_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06650
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	10190	10996	.	-	0	ID=cds-TMQ37842.1;Parent=gene-AO053_06650;Dbxref=NCBI_GP:TMQ37842.1;Name=TMQ37842.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688048.1;locus_tag=AO053_06650;product=methionine aminopeptidase;protein_id=TMQ37842.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	11132	11476	.	+	.	ID=gene-AO053_06655;Name=AO053_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06655
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	11132	11476	.	+	0	ID=cds-TMQ37843.1;Parent=gene-AO053_06655;Dbxref=NCBI_GP:TMQ37843.1;Name=TMQ37843.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45344.1;locus_tag=AO053_06655;product=iron-sulfur cluster insertion protein ErpA;protein_id=TMQ37843.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	11478	11831	.	+	.	ID=gene-AO053_06660;Name=AO053_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06660
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	11478	11831	.	+	0	ID=cds-TMQ37844.1;Parent=gene-AO053_06660;Dbxref=NCBI_GP:TMQ37844.1;Name=TMQ37844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44297.2;locus_tag=AO053_06660;product=hypothetical protein;protein_id=TMQ37844.1;transl_table=11
GCA_005888185.1|LNKP01000076.1	Genbank	gene	11838	14186	.	+	.	ID=gene-AO053_06665;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=AO053_06665
GCA_005888185.1|LNKP01000076.1	Protein Homology	CDS	11838	14186	.	+	0	ID=cds-TMQ37845.1;Parent=gene-AO053_06665;Dbxref=NCBI_GP:TMQ37845.1;Name=TMQ37845.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525634.1;locus_tag=AO053_06665;product=penicillin-binding protein 1B;protein_id=TMQ37845.1;transl_table=11
##sequence-region LNKP01000077.1 1 4408
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000077.1	Genbank	region	1	4408	.	+	.	ID=LNKP01000077.1:1..4408;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000077.1	Genbank	gene	54	926	.	+	.	ID=gene-AO053_06670;Name=AO053_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06670
GCA_005888185.1|LNKP01000077.1	Protein Homology	CDS	54	926	.	+	0	ID=cds-TMQ37816.1;Parent=gene-AO053_06670;Dbxref=NCBI_GP:TMQ37816.1;Name=TMQ37816.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFF7.1;locus_tag=AO053_06670;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=TMQ37816.1;transl_table=11
GCA_005888185.1|LNKP01000077.1	Genbank	gene	1082	2416	.	+	.	ID=gene-AO053_06675;Name=AO053_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06675
GCA_005888185.1|LNKP01000077.1	Protein Homology	CDS	1082	2416	.	+	0	ID=cds-TMQ37817.1;Parent=gene-AO053_06675;Dbxref=NCBI_GP:TMQ37817.1;Name=TMQ37817.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654923.1;locus_tag=AO053_06675;product=argininosuccinate synthase;protein_id=TMQ37817.1;transl_table=11
GCA_005888185.1|LNKP01000077.1	Genbank	gene	2487	3680	.	-	.	ID=gene-AO053_06680;Name=AO053_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06680
GCA_005888185.1|LNKP01000077.1	Protein Homology	CDS	2487	3680	.	-	0	ID=cds-TMQ37818.1;Parent=gene-AO053_06680;Dbxref=NCBI_GP:TMQ37818.1;Name=TMQ37818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05087.1;locus_tag=AO053_06680;product=hypothetical protein;protein_id=TMQ37818.1;transl_table=11
GCA_005888185.1|LNKP01000077.1	Genbank	gene	3724	4408	.	-	.	ID=gene-AO053_06685;Name=AO053_06685;end_range=4408,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06685;partial=true
GCA_005888185.1|LNKP01000077.1	Protein Homology	CDS	3724	4408	.	-	1	ID=cds-TMQ37819.1;Parent=gene-AO053_06685;Dbxref=NCBI_GP:TMQ37819.1;Name=TMQ37819.1;end_range=4408,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694215.1;locus_tag=AO053_06685;partial=true;product=lactam utilization protein LamB;protein_id=TMQ37819.1;transl_table=11
##sequence-region LNKP01000078.1 1 5555
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000078.1	Genbank	region	1	5555	.	+	.	ID=LNKP01000078.1:1..5555;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000078.1	Genbank	gene	38	967	.	-	.	ID=gene-AO053_06690;Name=AO053_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06690
GCA_005888185.1|LNKP01000078.1	Protein Homology	CDS	38	967	.	-	0	ID=cds-TMQ37784.1;Parent=gene-AO053_06690;Dbxref=NCBI_GP:TMQ37784.1;Name=TMQ37784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995766.1;locus_tag=AO053_06690;product=hypothetical protein;protein_id=TMQ37784.1;transl_table=11
GCA_005888185.1|LNKP01000078.1	Genbank	gene	964	1605	.	-	.	ID=gene-AO053_06695;Name=AO053_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06695
GCA_005888185.1|LNKP01000078.1	Protein Homology	CDS	964	1605	.	-	0	ID=cds-TMQ37785.1;Parent=gene-AO053_06695;Dbxref=NCBI_GP:TMQ37785.1;Name=TMQ37785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702508.1;locus_tag=AO053_06695;product=hypothetical protein;protein_id=TMQ37785.1;transl_table=11
GCA_005888185.1|LNKP01000078.1	Genbank	gene	1838	2710	.	-	.	ID=gene-AO053_06700;Name=AO053_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06700
GCA_005888185.1|LNKP01000078.1	Protein Homology	CDS	1838	2710	.	-	0	ID=cds-TMQ37786.1;Parent=gene-AO053_06700;Dbxref=NCBI_GP:TMQ37786.1;Name=TMQ37786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550645.1;locus_tag=AO053_06700;product=DNA-binding protein;protein_id=TMQ37786.1;transl_table=11
GCA_005888185.1|LNKP01000078.1	Genbank	gene	2688	4667	.	-	.	ID=gene-AO053_06705;Name=AO053_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06705
GCA_005888185.1|LNKP01000078.1	Protein Homology	CDS	2688	4667	.	-	0	ID=cds-TMQ37787.1;Parent=gene-AO053_06705;Dbxref=NCBI_GP:TMQ37787.1;Name=TMQ37787.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702510.1;locus_tag=AO053_06705;product=exoribonuclease II;protein_id=TMQ37787.1;transl_table=11
GCA_005888185.1|LNKP01000078.1	Genbank	gene	4749	5537	.	-	.	ID=gene-AO053_06710;Name=AO053_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06710
GCA_005888185.1|LNKP01000078.1	Protein Homology	CDS	4749	5537	.	-	0	ID=cds-TMQ37788.1;Parent=gene-AO053_06710;Dbxref=NCBI_GP:TMQ37788.1;Name=TMQ37788.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356566.1;locus_tag=AO053_06710;product=enoyl-ACP reductase;protein_id=TMQ37788.1;transl_table=11
##sequence-region LNKP01000079.1 1 4353
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000079.1	Genbank	region	1	4353	.	+	.	ID=LNKP01000079.1:1..4353;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000079.1	Genbank	gene	160	1743	.	+	.	ID=gene-AO053_06715;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=AO053_06715
GCA_005888185.1|LNKP01000079.1	Protein Homology	CDS	160	1743	.	+	0	ID=cds-TMQ37754.1;Parent=gene-AO053_06715;Dbxref=NCBI_GP:TMQ37754.1;Name=TMQ37754.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJL3.1;locus_tag=AO053_06715;product=peptide chain release factor 3;protein_id=TMQ37754.1;transl_table=11
GCA_005888185.1|LNKP01000079.1	Genbank	gene	1819	2052	.	-	.	ID=gene-AO053_06720;Name=AO053_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06720
GCA_005888185.1|LNKP01000079.1	Protein Homology	CDS	1819	2052	.	-	0	ID=cds-TMQ37755.1;Parent=gene-AO053_06720;Dbxref=NCBI_GP:TMQ37755.1;Name=TMQ37755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688063.1;locus_tag=AO053_06720;product=hypothetical protein;protein_id=TMQ37755.1;transl_table=11
GCA_005888185.1|LNKP01000079.1	Genbank	gene	2155	2484	.	-	.	ID=gene-AO053_06725;Name=AO053_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06725
GCA_005888185.1|LNKP01000079.1	Protein Homology	CDS	2155	2484	.	-	0	ID=cds-TMQ37756.1;Parent=gene-AO053_06725;Dbxref=NCBI_GP:TMQ37756.1;Name=TMQ37756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525629.1;locus_tag=AO053_06725;product=branched-chain amino acid ABC transporter;protein_id=TMQ37756.1;transl_table=11
GCA_005888185.1|LNKP01000079.1	Genbank	gene	2481	3215	.	-	.	ID=gene-AO053_06730;Name=AO053_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06730
GCA_005888185.1|LNKP01000079.1	Protein Homology	CDS	2481	3215	.	-	0	ID=cds-TMQ37757.1;Parent=gene-AO053_06730;Dbxref=NCBI_GP:TMQ37757.1;Name=TMQ37757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665596.1;locus_tag=AO053_06730;product=branched-chain amino acid transporter AzlC;protein_id=TMQ37757.1;transl_table=11
GCA_005888185.1|LNKP01000079.1	Genbank	gene	3225	4154	.	-	.	ID=gene-AO053_06735;Name=AO053_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06735
GCA_005888185.1|LNKP01000079.1	Protein Homology	CDS	3225	4154	.	-	0	ID=cds-TMQ37758.1;Parent=gene-AO053_06735;Dbxref=NCBI_GP:TMQ37758.1;Name=TMQ37758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688068.1;locus_tag=AO053_06735;product=LysR family transcriptional regulator;protein_id=TMQ37758.1;transl_table=11
##sequence-region LNKP01000080.1 1 12540
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000080.1	Genbank	region	1	12540	.	+	.	ID=LNKP01000080.1:1..12540;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000080.1	Genbank	gene	1	1960	.	-	.	ID=gene-AO053_06740;Name=AO053_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06740;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	1	1960	.	-	0	ID=cds-TMQ37738.1;Parent=gene-AO053_06740;Dbxref=NCBI_GP:TMQ37738.1;Name=TMQ37738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKP6.1;locus_tag=AO053_06740;partial=true;product=FAD-dependent cmnm(5)s(2)U34 oxidoreductase;protein_id=TMQ37738.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	2109	3329	.	+	.	ID=gene-AO053_06745;Name=AO053_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06745
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	2109	3329	.	+	0	ID=cds-TMQ37739.1;Parent=gene-AO053_06745;Dbxref=NCBI_GP:TMQ37739.1;Name=TMQ37739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687800.1;locus_tag=AO053_06745;product=3-oxoacyl-ACP synthase;protein_id=TMQ37739.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	3396	3659	.	-	.	ID=gene-AO053_06750;Name=AO053_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06750
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	3396	3659	.	-	0	ID=cds-TMQ37740.1;Parent=gene-AO053_06750;Dbxref=NCBI_GP:TMQ37740.1;Name=TMQ37740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45242.1;locus_tag=AO053_06750;product=glutaredoxin;protein_id=TMQ37740.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	3775	4683	.	+	.	ID=gene-AO053_06755;Name=AO053_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06755
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	3775	4683	.	+	0	ID=cds-TMQ37741.1;Parent=gene-AO053_06755;Dbxref=NCBI_GP:TMQ37741.1;Name=TMQ37741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45241.1;locus_tag=AO053_06755;product=ribosomal protein S6 modification protein;protein_id=TMQ37741.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	4722	5936	.	-	.	ID=gene-AO053_06760;Name=AO053_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06760
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	4722	5936	.	-	0	ID=cds-TMQ37742.1;Parent=gene-AO053_06760;Dbxref=NCBI_GP:TMQ37742.1;Name=TMQ37742.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45240.1;locus_tag=AO053_06760;product=sodium:glutamate symporter;protein_id=TMQ37742.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	5978	8212	.	-	.	ID=gene-AO053_06765;Name=AO053_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06765
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	5978	8212	.	-	0	ID=cds-TMQ37743.1;Parent=gene-AO053_06765;Dbxref=NCBI_GP:TMQ37743.1;Name=TMQ37743.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525881.1;locus_tag=AO053_06765;product=DNA topoisomerase IV subunit A;protein_id=TMQ37743.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	8280	10178	.	-	.	ID=gene-AO053_06770;Name=AO053_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06770
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	8280	10178	.	-	0	ID=cds-TMQ37744.1;Parent=gene-AO053_06770;Dbxref=NCBI_GP:TMQ37744.1;Name=TMQ37744.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525880.1;locus_tag=AO053_06770;product=DNA topoisomerase IV subunit B;protein_id=TMQ37744.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	10252	11187	.	-	.	ID=gene-AO053_06775;Name=AO053_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06775
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	10252	11187	.	-	0	ID=cds-TMQ37745.1;Parent=gene-AO053_06775;Dbxref=NCBI_GP:TMQ37745.1;Name=TMQ37745.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527712.1;locus_tag=AO053_06775;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=TMQ37745.1;transl_table=11
GCA_005888185.1|LNKP01000080.1	Genbank	gene	11284	12540	.	+	.	ID=gene-AO053_06780;Name=AO053_06780;end_range=12540,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06780;partial=true
GCA_005888185.1|LNKP01000080.1	Protein Homology	CDS	11284	12540	.	+	0	ID=cds-TMQ37746.1;Parent=gene-AO053_06780;Dbxref=NCBI_GP:TMQ37746.1;Name=TMQ37746.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;end_range=12540,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642014.1;locus_tag=AO053_06780;partial=true;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;protein_id=TMQ37746.1;transl_table=11
##sequence-region LNKP01000081.1 1 1455
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000081.1	Genbank	region	1	1455	.	+	.	ID=LNKP01000081.1:1..1455;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000081.1	Genbank	gene	360	1097	.	+	.	ID=gene-AO053_06785;Name=AO053_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06785
GCA_005888185.1|LNKP01000081.1	Protein Homology	CDS	360	1097	.	+	0	ID=cds-TMQ37639.1;Parent=gene-AO053_06785;Dbxref=NCBI_GP:TMQ37639.1;Name=TMQ37639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644652.1;locus_tag=AO053_06785;product=molybdate ABC transporter substrate-binding protein;protein_id=TMQ37639.1;transl_table=11
##sequence-region LNKP01000082.1 1 5250
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000082.1	Genbank	region	1	5250	.	+	.	ID=LNKP01000082.1:1..5250;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000082.1	Genbank	pseudogene	1	414	.	+	.	ID=gene-AO053_06790;Name=AO053_06790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06790;pseudo=true
GCA_005888185.1|LNKP01000082.1	Protein Homology	CDS	1	414	.	+	0	ID=cds-AO053_06790;Parent=gene-AO053_06790;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692940.1;locus_tag=AO053_06790;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000082.1	Genbank	gene	416	1015	.	+	.	ID=gene-AO053_06795;Name=AO053_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06795
GCA_005888185.1|LNKP01000082.1	Protein Homology	CDS	416	1015	.	+	0	ID=cds-TMQ37565.1;Parent=gene-AO053_06795;Dbxref=NCBI_GP:TMQ37565.1;Name=TMQ37565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692938.1;locus_tag=AO053_06795;product=iron ABC transporter ATP-binding protein;protein_id=TMQ37565.1;transl_table=11
GCA_005888185.1|LNKP01000082.1	Protein Homology	pseudogene	1025	1870	.	+	.	ID=gene-AO053_06800;Name=AO053_06800;Note=disrupted;description=pyrophosphorylase ModD;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06800;pseudo=true
GCA_005888185.1|LNKP01000082.1	Genbank	gene	1938	2993	.	+	.	ID=gene-AO053_06805;Name=AO053_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06805
GCA_005888185.1|LNKP01000082.1	Protein Homology	CDS	1938	2993	.	+	0	ID=cds-TMQ37566.1;Parent=gene-AO053_06805;Dbxref=NCBI_GP:TMQ37566.1;Name=TMQ37566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687818.1;locus_tag=AO053_06805;product=hypothetical protein;protein_id=TMQ37566.1;transl_table=11
GCA_005888185.1|LNKP01000082.1	Genbank	gene	2980	3993	.	+	.	ID=gene-AO053_06810;Name=AO053_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06810
GCA_005888185.1|LNKP01000082.1	Protein Homology	CDS	2980	3993	.	+	0	ID=cds-TMQ37567.1;Parent=gene-AO053_06810;Dbxref=NCBI_GP:TMQ37567.1;Name=TMQ37567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525875.1;locus_tag=AO053_06810;product=ABC transporter permease;protein_id=TMQ37567.1;transl_table=11
GCA_005888185.1|LNKP01000082.1	Genbank	gene	3986	4747	.	+	.	ID=gene-AO053_06815;Name=AO053_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06815
GCA_005888185.1|LNKP01000082.1	Protein Homology	CDS	3986	4747	.	+	0	ID=cds-TMQ37568.1;Parent=gene-AO053_06815;Dbxref=NCBI_GP:TMQ37568.1;Name=TMQ37568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687821.1;locus_tag=AO053_06815;product=ABC transporter ATP-binding protein;protein_id=TMQ37568.1;transl_table=11
GCA_005888185.1|LNKP01000082.1	Protein Homology	pseudogene	4757	5101	.	+	.	ID=gene-AO053_06820;Name=AO053_06820;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06820;pseudo=true
##sequence-region LNKP01000083.1 1 1976
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000083.1	Genbank	region	1	1976	.	+	.	ID=LNKP01000083.1:1..1976;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000083.1	Genbank	pseudogene	1	332	.	+	.	ID=gene-AO053_06825;Name=AO053_06825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06825;pseudo=true
GCA_005888185.1|LNKP01000083.1	Protein Homology	CDS	1	332	.	+	2	ID=cds-AO053_06825;Parent=gene-AO053_06825;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525911.1;locus_tag=AO053_06825;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000083.1	Genbank	gene	456	872	.	+	.	ID=gene-AO053_06830;Name=AO053_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06830
GCA_005888185.1|LNKP01000083.1	Protein Homology	CDS	456	872	.	+	0	ID=cds-TMQ37563.1;Parent=gene-AO053_06830;Dbxref=NCBI_GP:TMQ37563.1;Name=TMQ37563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525910.1;locus_tag=AO053_06830;product=virion morphogenesis protein;protein_id=TMQ37563.1;transl_table=11
GCA_005888185.1|LNKP01000083.1	Genbank	gene	1246	1976	.	-	.	ID=gene-AO053_06835;Name=AO053_06835;end_range=1976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06835;partial=true
GCA_005888185.1|LNKP01000083.1	Protein Homology	CDS	1246	1976	.	-	2	ID=cds-TMQ37564.1;Parent=gene-AO053_06835;Dbxref=NCBI_GP:TMQ37564.1;Name=TMQ37564.1;end_range=1976,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527719.1;locus_tag=AO053_06835;partial=true;product=lipopolysaccharide cholinephosphotransferase;protein_id=TMQ37564.1;transl_table=11
##sequence-region LNKP01000084.1 1 8625
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000084.1	Genbank	region	1	8625	.	+	.	ID=LNKP01000084.1:1..8625;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000084.1	Genbank	gene	278	853	.	+	.	ID=gene-AO053_06840;Name=AO053_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06840
GCA_005888185.1|LNKP01000084.1	Protein Homology	CDS	278	853	.	+	0	ID=cds-TMQ37558.1;Parent=gene-AO053_06840;Dbxref=NCBI_GP:TMQ37558.1;Name=TMQ37558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526572.1;locus_tag=AO053_06840;product=uracil-DNA glycosylase;protein_id=TMQ37558.1;transl_table=11
GCA_005888185.1|LNKP01000084.1	Genbank	gene	967	2763	.	+	.	ID=gene-AO053_06845;Name=AO053_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06845
GCA_005888185.1|LNKP01000084.1	Protein Homology	CDS	967	2763	.	+	0	ID=cds-TMQ37559.1;Parent=gene-AO053_06845;Dbxref=NCBI_GP:TMQ37559.1;Name=TMQ37559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658465.1;locus_tag=AO053_06845;product=hybrid sensor histidine kinase/response regulator;protein_id=TMQ37559.1;transl_table=11
GCA_005888185.1|LNKP01000084.1	Genbank	gene	2977	3606	.	+	.	ID=gene-AO053_06850;Name=AO053_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06850
GCA_005888185.1|LNKP01000084.1	Protein Homology	CDS	2977	3606	.	+	0	ID=cds-TMQ37560.1;Parent=gene-AO053_06850;Dbxref=NCBI_GP:TMQ37560.1;Name=TMQ37560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996256.1;locus_tag=AO053_06850;product=hypothetical protein;protein_id=TMQ37560.1;transl_table=11
GCA_005888185.1|LNKP01000084.1	Genbank	gene	3767	6850	.	-	.	ID=gene-AO053_06855;Name=AO053_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06855
GCA_005888185.1|LNKP01000084.1	Protein Homology	CDS	3767	6850	.	-	0	ID=cds-TMQ37561.1;Parent=gene-AO053_06855;Dbxref=NCBI_GP:TMQ37561.1;Name=TMQ37561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996257.1;locus_tag=AO053_06855;product=DEAD/DEAH box helicase;protein_id=TMQ37561.1;transl_table=11
GCA_005888185.1|LNKP01000084.1	Genbank	gene	7094	8014	.	-	.	ID=gene-AO053_06860;Name=AO053_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06860
GCA_005888185.1|LNKP01000084.1	Protein Homology	CDS	7094	8014	.	-	0	ID=cds-TMQ37562.1;Parent=gene-AO053_06860;Dbxref=NCBI_GP:TMQ37562.1;Name=TMQ37562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526569.1;locus_tag=AO053_06860;product=CAAX protease;protein_id=TMQ37562.1;transl_table=11
GCA_005888185.1|LNKP01000084.1	Genbank	pseudogene	8021	8625	.	-	.	ID=gene-AO053_06865;Name=AO053_06865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06865;pseudo=true
GCA_005888185.1|LNKP01000084.1	Protein Homology	CDS	8021	8625	.	-	2	ID=cds-AO053_06865;Parent=gene-AO053_06865;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527520.1;locus_tag=AO053_06865;pseudo=true;transl_table=11
##sequence-region LNKP01000085.1 1 27486
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000085.1	Genbank	region	1	27486	.	+	.	ID=LNKP01000085.1:1..27486;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000085.1	Genbank	pseudogene	1	562	.	-	.	ID=gene-AO053_06870;Name=AO053_06870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06870;pseudo=true
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	1	562	.	-	0	ID=cds-AO053_06870;Parent=gene-AO053_06870;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527520.1;locus_tag=AO053_06870;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	645	1643	.	-	.	ID=gene-AO053_06875;Name=AO053_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06875
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	645	1643	.	-	0	ID=cds-TMQ37533.1;Parent=gene-AO053_06875;Dbxref=NCBI_GP:TMQ37533.1;Name=TMQ37533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996261.1;locus_tag=AO053_06875;product=cell filamentation protein Fic;protein_id=TMQ37533.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	1646	3190	.	-	.	ID=gene-AO053_06880;Name=AO053_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06880
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	1646	3190	.	-	0	ID=cds-TMQ37534.1;Parent=gene-AO053_06880;Dbxref=NCBI_GP:TMQ37534.1;Name=TMQ37534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701453.1;locus_tag=AO053_06880;product=restriction endonuclease;protein_id=TMQ37534.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	3422	5461	.	-	.	ID=gene-AO053_06885;Name=AO053_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06885
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	3422	5461	.	-	0	ID=cds-TMQ37554.1;Parent=gene-AO053_06885;Dbxref=NCBI_GP:TMQ37554.1;Name=TMQ37554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44573.1;locus_tag=AO053_06885;product=oligopeptidase A;protein_id=TMQ37554.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	5586	5948	.	+	.	ID=gene-AO053_06890;Name=AO053_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06890
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	5586	5948	.	+	0	ID=cds-TMQ37535.1;Parent=gene-AO053_06890;Dbxref=NCBI_GP:TMQ37535.1;Name=TMQ37535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648761.1;locus_tag=AO053_06890;product=hypothetical protein;protein_id=TMQ37535.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	5941	7485	.	+	.	ID=gene-AO053_06895;Name=AO053_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06895
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	5941	7485	.	+	0	ID=cds-TMQ37536.1;Parent=gene-AO053_06895;Dbxref=NCBI_GP:TMQ37536.1;Name=TMQ37536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44572.1;locus_tag=AO053_06895;product=hypothetical protein;protein_id=TMQ37536.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	7803	8453	.	-	.	ID=gene-AO053_06900;Name=AO053_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06900
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	7803	8453	.	-	0	ID=cds-TMQ37537.1;Parent=gene-AO053_06900;Dbxref=NCBI_GP:TMQ37537.1;Name=TMQ37537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639470.1;locus_tag=AO053_06900;product=GTP cyclohydrolase;protein_id=TMQ37537.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	8522	9247	.	+	.	ID=gene-AO053_06905;Name=AO053_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06905
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	8522	9247	.	+	0	ID=cds-TMQ37538.1;Parent=gene-AO053_06905;Dbxref=NCBI_GP:TMQ37538.1;Name=TMQ37538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653880.1;locus_tag=AO053_06905;product=phosphatidylglycerophosphatase;protein_id=TMQ37538.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	10337	11197	.	-	.	ID=gene-AO053_06910;Name=AO053_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06910
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	10337	11197	.	-	0	ID=cds-TMQ37539.1;Parent=gene-AO053_06910;Dbxref=NCBI_GP:TMQ37539.1;Name=TMQ37539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996270.1;locus_tag=AO053_06910;product=DNA adenine methylase;protein_id=TMQ37539.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	11199	12287	.	-	.	ID=gene-AO053_06915;Name=AO053_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06915
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	11199	12287	.	-	0	ID=cds-TMQ37540.1;Parent=gene-AO053_06915;Dbxref=NCBI_GP:TMQ37540.1;Name=TMQ37540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526563.1;locus_tag=AO053_06915;product=3-dehydroquinate synthase;protein_id=TMQ37540.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	12307	12849	.	-	.	ID=gene-AO053_06920;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AO053_06920
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	12307	12849	.	-	0	ID=cds-TMQ37541.1;Parent=gene-AO053_06920;Dbxref=NCBI_GP:TMQ37541.1;Name=TMQ37541.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAU9.1;locus_tag=AO053_06920;product=shikimate kinase;protein_id=TMQ37541.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	13133	14944	.	-	.	ID=gene-AO053_06925;Name=AO053_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06925
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	13133	14944	.	-	0	ID=cds-TMQ37542.1;Parent=gene-AO053_06925;Dbxref=NCBI_GP:TMQ37542.1;Name=TMQ37542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996272.1;locus_tag=AO053_06925;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=TMQ37542.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	14967	15740	.	-	.	ID=gene-AO053_06930;Name=AO053_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06930
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	14967	15740	.	-	0	ID=cds-TMQ37543.1;Parent=gene-AO053_06930;Dbxref=NCBI_GP:TMQ37543.1;Name=TMQ37543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43963.1;locus_tag=AO053_06930;product=hypothetical protein;protein_id=TMQ37543.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	16033	16281	.	+	.	ID=gene-AO053_06935;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AO053_06935
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	16033	16281	.	+	0	ID=cds-TMQ37544.1;Parent=gene-AO053_06935;Dbxref=NCBI_GP:TMQ37544.1;Name=TMQ37544.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:SwissProt:P44382.1;locus_tag=AO053_06935;product=30S ribosomal protein S16;protein_id=TMQ37544.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	16326	16853	.	+	.	ID=gene-AO053_06940;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AO053_06940
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	16326	16853	.	+	0	ID=cds-TMQ37545.1;Parent=gene-AO053_06940;Dbxref=NCBI_GP:TMQ37545.1;Name=TMQ37545.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNY7.2;locus_tag=AO053_06940;product=16S rRNA-processing protein RimM;protein_id=TMQ37545.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	16891	17631	.	+	.	ID=gene-AO053_06945;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AO053_06945
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	16891	17631	.	+	0	ID=cds-TMQ37546.1;Parent=gene-AO053_06945;Dbxref=NCBI_GP:TMQ37546.1;Name=TMQ37546.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UAV3.1;locus_tag=AO053_06945;product=tRNA (guanine-N1)-methyltransferase;protein_id=TMQ37546.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	17668	18018	.	+	.	ID=gene-AO053_06950;Name=AO053_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06950
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	17668	18018	.	+	0	ID=cds-TMQ37547.1;Parent=gene-AO053_06950;Dbxref=NCBI_GP:TMQ37547.1;Name=TMQ37547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44357.2;locus_tag=AO053_06950;product=50S ribosomal protein L19;protein_id=TMQ37547.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Protein Homology	pseudogene	18128	19096	.	-	.	ID=gene-AO053_06955;Name=AO053_06955;Note=disrupted;description=selenide%2C water dikinase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06955;pseudo=true
GCA_005888185.1|LNKP01000085.1	Genbank	gene	19223	20179	.	-	.	ID=gene-AO053_06960;Name=AO053_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06960
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	19223	20179	.	-	0	ID=cds-TMQ37548.1;Parent=gene-AO053_06960;Dbxref=NCBI_GP:TMQ37548.1;Name=TMQ37548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701444.1;locus_tag=AO053_06960;product=lauroyl acyltransferase;protein_id=TMQ37548.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	20226	20993	.	-	.	ID=gene-AO053_06965;Name=AO053_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06965
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	20226	20993	.	-	0	ID=cds-TMQ37549.1;Parent=gene-AO053_06965;Dbxref=NCBI_GP:TMQ37549.1;Name=TMQ37549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689688.1;locus_tag=AO053_06965;product=hypothetical protein;protein_id=TMQ37549.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	21011	21871	.	-	.	ID=gene-AO053_06970;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=AO053_06970
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	21011	21871	.	-	0	ID=cds-TMQ37550.1;Parent=gene-AO053_06970;Dbxref=NCBI_GP:TMQ37550.1;Name=TMQ37550.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701442.1;locus_tag=AO053_06970;product=murein endopeptidase;protein_id=TMQ37550.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	21956	23029	.	-	.	ID=gene-AO053_06975;Name=AO053_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06975
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	21956	23029	.	-	0	ID=cds-TMQ37551.1;Parent=gene-AO053_06975;Dbxref=NCBI_GP:TMQ37551.1;Name=TMQ37551.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630662.1;locus_tag=AO053_06975;product=chorismate synthase;protein_id=TMQ37551.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	23039	26359	.	-	.	ID=gene-AO053_06980;Name=AO053_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06980
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	23039	26359	.	-	0	ID=cds-TMQ37552.1;Parent=gene-AO053_06980;Dbxref=NCBI_GP:TMQ37552.1;Name=TMQ37552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688089.1;locus_tag=AO053_06980;product=hypothetical protein;protein_id=TMQ37552.1;transl_table=11
GCA_005888185.1|LNKP01000085.1	Genbank	gene	26401	27486	.	-	.	ID=gene-AO053_06985;Name=AO053_06985;end_range=27486,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06985;partial=true
GCA_005888185.1|LNKP01000085.1	Protein Homology	CDS	26401	27486	.	-	0	ID=cds-TMQ37553.1;Parent=gene-AO053_06985;Dbxref=NCBI_GP:TMQ37553.1;Name=TMQ37553.1;end_range=27486,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648715.1;locus_tag=AO053_06985;partial=true;product=2-succinylbenzoate-CoA ligase;protein_id=TMQ37553.1;transl_table=11
##sequence-region LNKP01000086.1 1 7103
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000086.1	Genbank	region	1	7103	.	+	.	ID=LNKP01000086.1:1..7103;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000086.1	Genbank	pseudogene	1	272	.	-	.	ID=gene-AO053_06990;Name=AO053_06990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_06990;pseudo=true
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	1	272	.	-	0	ID=cds-AO053_06990;Parent=gene-AO053_06990;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550551.1;locus_tag=AO053_06990;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	275	868	.	-	.	ID=gene-AO053_06995;Name=AO053_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_06995
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	275	868	.	-	0	ID=cds-TMQ37504.1;Parent=gene-AO053_06995;Dbxref=NCBI_GP:TMQ37504.1;Name=TMQ37504.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44564.1;locus_tag=AO053_06995;product=replication initiation regulator SeqA;protein_id=TMQ37504.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	939	1721	.	+	.	ID=gene-AO053_07000;Name=AO053_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07000
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	939	1721	.	+	0	ID=cds-TMQ37505.1;Parent=gene-AO053_07000;Dbxref=NCBI_GP:TMQ37505.1;Name=TMQ37505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550552.1;locus_tag=AO053_07000;product=acyl-CoA esterase;protein_id=TMQ37505.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	1818	2342	.	+	.	ID=gene-AO053_07005;Name=AO053_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07005
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	1818	2342	.	+	0	ID=cds-TMQ37506.1;Parent=gene-AO053_07005;Dbxref=NCBI_GP:TMQ37506.1;Name=TMQ37506.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664331.1;locus_tag=AO053_07005;product=flavodoxin FldA;protein_id=TMQ37506.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	2371	2811	.	+	.	ID=gene-AO053_07010;Name=AO053_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07010
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	2371	2811	.	+	0	ID=cds-TMQ37507.1;Parent=gene-AO053_07010;Dbxref=NCBI_GP:TMQ37507.1;Name=TMQ37507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648707.1;locus_tag=AO053_07010;product=Fur family transcriptional regulator;protein_id=TMQ37507.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	2919	4268	.	-	.	ID=gene-AO053_07015;Name=AO053_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07015
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	2919	4268	.	-	0	ID=cds-TMQ37508.1;Parent=gene-AO053_07015;Dbxref=NCBI_GP:TMQ37508.1;Name=TMQ37508.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671207.1;locus_tag=AO053_07015;product=glutamate dehydrogenase;protein_id=TMQ37508.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	4630	5400	.	-	.	ID=gene-AO053_07020;Name=AO053_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07020
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	4630	5400	.	-	0	ID=cds-TMQ37509.1;Parent=gene-AO053_07020;Dbxref=NCBI_GP:TMQ37509.1;Name=TMQ37509.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701438.1;locus_tag=AO053_07020;product=twin-arginine protein translocation system subunit TatC;protein_id=TMQ37509.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	5410	5970	.	-	.	ID=gene-AO053_07025;Name=AO053_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07025
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	5410	5970	.	-	0	ID=cds-TMQ37510.1;Parent=gene-AO053_07025;Dbxref=NCBI_GP:TMQ37510.1;Name=TMQ37510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054864.1;locus_tag=AO053_07025;product=preprotein translocase subunit TatB;protein_id=TMQ37510.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	5974	6201	.	-	.	ID=gene-AO053_07030;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=AO053_07030
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	5974	6201	.	-	0	ID=cds-TMQ37511.1;Parent=gene-AO053_07030;Dbxref=NCBI_GP:TMQ37511.1;Name=TMQ37511.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629124.1;locus_tag=AO053_07030;product=preprotein translocase subunit SecA;protein_id=TMQ37511.1;transl_table=11
GCA_005888185.1|LNKP01000086.1	Genbank	gene	6419	6826	.	-	.	ID=gene-AO053_07035;Name=AO053_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07035
GCA_005888185.1|LNKP01000086.1	Protein Homology	CDS	6419	6826	.	-	0	ID=cds-TMQ37512.1;Parent=gene-AO053_07035;Dbxref=NCBI_GP:TMQ37512.1;Name=TMQ37512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661364.1;locus_tag=AO053_07035;product=MerR family transcriptional regulator;protein_id=TMQ37512.1;transl_table=11
##sequence-region LNKP01000087.1 1 32146
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000087.1	Genbank	region	1	32146	.	+	.	ID=LNKP01000087.1:1..32146;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000087.1	Genbank	gene	1	572	.	+	.	ID=gene-AO053_07040;Name=AO053_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07040;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	1	572	.	+	2	ID=cds-TMQ37431.1;Parent=gene-AO053_07040;Dbxref=NCBI_GP:TMQ37431.1;Name=TMQ37431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961786.1;locus_tag=AO053_07040;partial=true;product=S-formylglutathione hydrolase;protein_id=TMQ37431.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	757	2196	.	-	.	ID=gene-AO053_07045;Name=AO053_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07045
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	757	2196	.	-	0	ID=cds-TMQ37432.1;Parent=gene-AO053_07045;Dbxref=NCBI_GP:TMQ37432.1;Name=TMQ37432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658154.1;locus_tag=AO053_07045;product=sodium:alanine symporter;protein_id=TMQ37432.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	2381	3295	.	-	.	ID=gene-AO053_07050;Name=AO053_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07050
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	2381	3295	.	-	0	ID=cds-TMQ37433.1;Parent=gene-AO053_07050;Dbxref=NCBI_GP:TMQ37433.1;Name=TMQ37433.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996293.1;locus_tag=AO053_07050;product=N-acetylglucosamine kinase;protein_id=TMQ37433.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	3800	4654	.	+	.	ID=gene-AO053_07055;Name=AO053_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07055
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	3800	4654	.	+	0	ID=cds-TMQ37434.1;Parent=gene-AO053_07055;Dbxref=NCBI_GP:TMQ37434.1;Name=TMQ37434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627709.1;locus_tag=AO053_07055;product=formate transporter FocA;protein_id=TMQ37434.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	4692	7004	.	+	.	ID=gene-AO053_07060;Name=AO053_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07060
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	4692	7004	.	+	0	ID=cds-TMQ37435.1;Parent=gene-AO053_07060;Dbxref=NCBI_GP:TMQ37435.1;Name=TMQ37435.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43753.2;locus_tag=AO053_07060;product=pyruvate formate-lyase;protein_id=TMQ37435.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	7085	7375	.	+	.	ID=gene-AO053_07065;Name=AO053_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07065
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	7085	7375	.	+	0	ID=cds-TMQ37436.1;Parent=gene-AO053_07065;Dbxref=NCBI_GP:TMQ37436.1;Name=TMQ37436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647085.1;locus_tag=AO053_07065;product=antibiotic biosynthesis monooxygenase;protein_id=TMQ37436.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	7491	8231	.	+	.	ID=gene-AO053_07070;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=AO053_07070
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	7491	8231	.	+	0	ID=cds-TMQ37437.1;Parent=gene-AO053_07070;Dbxref=NCBI_GP:TMQ37437.1;Name=TMQ37437.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635116.1;locus_tag=AO053_07070;product=pyruvate formate lyase-activating enzyme 1;protein_id=TMQ37437.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	8263	8745	.	+	.	ID=gene-AO053_07075;Name=AO053_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07075
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	8263	8745	.	+	0	ID=cds-TMQ37438.1;Parent=gene-AO053_07075;Dbxref=NCBI_GP:TMQ37438.1;Name=TMQ37438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701431.1;locus_tag=AO053_07075;product=hypothetical protein;protein_id=TMQ37438.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	8825	9613	.	-	.	ID=gene-AO053_07080;Name=AO053_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07080
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	8825	9613	.	-	0	ID=cds-TMQ37439.1;Parent=gene-AO053_07080;Dbxref=NCBI_GP:TMQ37439.1;Name=TMQ37439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44553.1;locus_tag=AO053_07080;product=outer membrane assembly protein BamD;protein_id=TMQ37439.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	9721	10695	.	+	.	ID=gene-AO053_07085;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=AO053_07085
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	9721	10695	.	+	0	ID=cds-TMQ37440.1;Parent=gene-AO053_07085;Dbxref=NCBI_GP:TMQ37440.1;Name=TMQ37440.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550559.1;locus_tag=AO053_07085;product=23S rRNA pseudouridylate synthase;protein_id=TMQ37440.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	10697	11431	.	+	.	ID=gene-AO053_07090;Name=AO053_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07090
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	10697	11431	.	+	0	ID=cds-TMQ37441.1;Parent=gene-AO053_07090;Dbxref=NCBI_GP:TMQ37441.1;Name=TMQ37441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44552.1;locus_tag=AO053_07090;product=laccase;protein_id=TMQ37441.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	11475	12626	.	-	.	ID=gene-AO053_07095;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AO053_07095
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	11475	12626	.	-	0	ID=cds-TMQ37442.1;Parent=gene-AO053_07095;Dbxref=NCBI_GP:TMQ37442.1;Name=TMQ37442.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526544.1;locus_tag=AO053_07095;product=tRNA-specific 2-thiouridylase;protein_id=TMQ37442.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	12743	13003	.	-	.	ID=gene-AO053_07100;Name=AO053_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07100
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	12743	13003	.	-	0	ID=cds-TMQ37443.1;Parent=gene-AO053_07100;Dbxref=NCBI_GP:TMQ37443.1;Name=TMQ37443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653798.1;locus_tag=AO053_07100;product=hypothetical protein;protein_id=TMQ37443.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	13006	14046	.	-	.	ID=gene-AO053_07105;Name=AO053_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07105
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	13006	14046	.	-	0	ID=cds-TMQ37444.1;Parent=gene-AO053_07105;Dbxref=NCBI_GP:TMQ37444.1;Name=TMQ37444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996303.1;locus_tag=AO053_07105;product=thiamine biosynthesis protein ApbE;protein_id=TMQ37444.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	14190	15425	.	-	.	ID=gene-AO053_07110;Name=AO053_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07110
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	14190	15425	.	-	0	ID=cds-TMQ37445.1;Parent=gene-AO053_07110;Dbxref=NCBI_GP:TMQ37445.1;Name=TMQ37445.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05012.1;locus_tag=AO053_07110;product=Na(+)-translocating NADH-quinone reductase subunit F;protein_id=TMQ37445.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	15438	16034	.	-	.	ID=gene-AO053_07115;Name=AO053_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07115
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	15438	16034	.	-	0	ID=cds-TMQ37446.1;Parent=gene-AO053_07115;Dbxref=NCBI_GP:TMQ37446.1;Name=TMQ37446.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629181.1;locus_tag=AO053_07115;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=TMQ37446.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	16038	16664	.	-	.	ID=gene-AO053_07120;Name=AO053_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07120
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	16038	16664	.	-	0	ID=cds-TMQ37447.1;Parent=gene-AO053_07120;Dbxref=NCBI_GP:TMQ37447.1;Name=TMQ37447.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43958.2;locus_tag=AO053_07120;product=Na(+)-translocating NADH-quinone reductase subunit D;protein_id=TMQ37447.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	16664	17398	.	-	.	ID=gene-AO053_07125;Name=AO053_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07125
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	16664	17398	.	-	0	ID=cds-TMQ37448.1;Parent=gene-AO053_07125;Dbxref=NCBI_GP:TMQ37448.1;Name=TMQ37448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43957.1;locus_tag=AO053_07125;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=TMQ37448.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	17391	18626	.	-	.	ID=gene-AO053_07130;Name=AO053_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07130
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	17391	18626	.	-	0	ID=cds-TMQ37449.1;Parent=gene-AO053_07130;Dbxref=NCBI_GP:TMQ37449.1;Name=TMQ37449.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05011.1;locus_tag=AO053_07130;product=Na(+)-translocating NADH-quinone reductase subunit B;protein_id=TMQ37449.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	18629	19972	.	-	.	ID=gene-AO053_07135;Name=AO053_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07135
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	18629	19972	.	-	0	ID=cds-TMQ37450.1;Parent=gene-AO053_07135;Dbxref=NCBI_GP:TMQ37450.1;Name=TMQ37450.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526540.1;locus_tag=AO053_07135;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=TMQ37450.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	20263	20574	.	-	.	ID=gene-AO053_07140;Name=AO053_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07140
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	20263	20574	.	-	0	ID=cds-TMQ37451.1;Parent=gene-AO053_07140;Dbxref=NCBI_GP:TMQ37451.1;Name=TMQ37451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653788.1;locus_tag=AO053_07140;product=transcriptional regulator;protein_id=TMQ37451.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	20668	21267	.	+	.	ID=gene-AO053_07145;Name=AO053_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07145
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	20668	21267	.	+	0	ID=cds-TMQ37452.1;Parent=gene-AO053_07145;Dbxref=NCBI_GP:TMQ37452.1;Name=TMQ37452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43782.1;locus_tag=AO053_07145;product=hypothetical protein;protein_id=TMQ37452.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	21483	22853	.	+	.	ID=gene-AO053_07150;Name=AO053_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07150
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	21483	22853	.	+	0	ID=cds-TMQ37453.1;Parent=gene-AO053_07150;Dbxref=NCBI_GP:TMQ37453.1;Name=TMQ37453.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996309.1;locus_tag=AO053_07150;product=glutathione reductase;protein_id=TMQ37453.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	22962	23846	.	-	.	ID=gene-AO053_07155;Name=AO053_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07155
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	22962	23846	.	-	0	ID=cds-TMQ37463.1;Parent=gene-AO053_07155;Dbxref=NCBI_GP:TMQ37463.1;Name=TMQ37463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691516.1;locus_tag=AO053_07155;product=phosphatidylserine decarboxylase;protein_id=TMQ37463.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	24005	24529	.	+	.	ID=gene-AO053_07160;Name=AO053_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07160
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	24005	24529	.	+	0	ID=cds-TMQ37454.1;Parent=gene-AO053_07160;Dbxref=NCBI_GP:TMQ37454.1;Name=TMQ37454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639928.1;locus_tag=AO053_07160;product=hypothetical protein;protein_id=TMQ37454.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	24552	24722	.	+	.	ID=gene-AO053_07165;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AO053_07165
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	24552	24722	.	+	0	ID=cds-TMQ37455.1;Parent=gene-AO053_07165;Dbxref=NCBI_GP:TMQ37455.1;Name=TMQ37455.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CJS9.2;locus_tag=AO053_07165;product=50S ribosomal protein L32;protein_id=TMQ37455.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	24908	25858	.	+	.	ID=gene-AO053_07170;Name=AO053_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07170
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	24908	25858	.	+	0	ID=cds-TMQ37456.1;Parent=gene-AO053_07170;Dbxref=NCBI_GP:TMQ37456.1;Name=TMQ37456.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550567.1;locus_tag=AO053_07170;product=3-oxoacyl-ACP synthase;protein_id=TMQ37456.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	26482	27420	.	+	.	ID=gene-AO053_07175;Name=AO053_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07175
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	26482	27420	.	+	0	ID=cds-TMQ37457.1;Parent=gene-AO053_07175;Dbxref=NCBI_GP:TMQ37457.1;Name=TMQ37457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43712.1;locus_tag=AO053_07175;product=malonyl CoA-ACP transacylase;protein_id=TMQ37457.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	27433	28161	.	+	.	ID=gene-AO053_07180;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AO053_07180
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	27433	28161	.	+	0	ID=cds-TMQ37458.1;Parent=gene-AO053_07180;Dbxref=NCBI_GP:TMQ37458.1;Name=TMQ37458.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654404.1;locus_tag=AO053_07180;product=beta-ketoacyl-ACP reductase;protein_id=TMQ37458.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	28417	28647	.	+	.	ID=gene-AO053_07185;Name=AO053_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07185
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	28417	28647	.	+	0	ID=cds-TMQ37459.1;Parent=gene-AO053_07185;Dbxref=NCBI_GP:TMQ37459.1;Name=TMQ37459.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CJS5.1;locus_tag=AO053_07185;product=acyl carrier protein;protein_id=TMQ37459.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	28853	30184	.	+	.	ID=gene-AO053_07190;Name=AO053_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07190
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	28853	30184	.	+	0	ID=cds-TMQ37460.1;Parent=gene-AO053_07190;Dbxref=NCBI_GP:TMQ37460.1;Name=TMQ37460.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633267.1;locus_tag=AO053_07190;product=C4-dicarboxylate transporter;protein_id=TMQ37460.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	30244	30951	.	+	.	ID=gene-AO053_07195;Name=AO053_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07195
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	30244	30951	.	+	0	ID=cds-TMQ37461.1;Parent=gene-AO053_07195;Dbxref=NCBI_GP:TMQ37461.1;Name=TMQ37461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996315.1;locus_tag=AO053_07195;product=4'-phosphopantetheinyl transferase;protein_id=TMQ37461.1;transl_table=11
GCA_005888185.1|LNKP01000087.1	Genbank	gene	31073	32146	.	+	.	ID=gene-AO053_07200;Name=AO053_07200;end_range=32146,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07200;partial=true
GCA_005888185.1|LNKP01000087.1	Protein Homology	CDS	31073	32146	.	+	0	ID=cds-TMQ37462.1;Parent=gene-AO053_07200;Dbxref=NCBI_GP:TMQ37462.1;Name=TMQ37462.1;end_range=32146,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668135.1;locus_tag=AO053_07200;partial=true;product=membrane protease HflK;protein_id=TMQ37462.1;transl_table=11
##sequence-region LNKP01000088.1 1 13485
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000088.1	Genbank	region	1	13485	.	+	.	ID=LNKP01000088.1:1..13485;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000088.1	Genbank	gene	146	1033	.	+	.	ID=gene-AO053_07205;Name=AO053_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07205
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	146	1033	.	+	0	ID=cds-TMQ37394.1;Parent=gene-AO053_07205;Dbxref=NCBI_GP:TMQ37394.1;Name=TMQ37394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550571.1;locus_tag=AO053_07205;product=protease modulator HflC;protein_id=TMQ37394.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Protein Homology	pseudogene	1076	1510	.	-	.	ID=gene-AO053_07210;Name=AO053_07210;Note=disrupted;description=isoprenylcysteine carboxyl methyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_07210;pseudo=true
GCA_005888185.1|LNKP01000088.1	Genbank	gene	1672	2799	.	-	.	ID=gene-AO053_07215;Name=AO053_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07215
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	1672	2799	.	-	0	ID=cds-TMQ37395.1;Parent=gene-AO053_07215;Dbxref=NCBI_GP:TMQ37395.1;Name=TMQ37395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648627.1;locus_tag=AO053_07215;product=N-acetylneuraminic acid mutarotase;protein_id=TMQ37395.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	2975	4825	.	-	.	ID=gene-AO053_07220;Name=AO053_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07220
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	2975	4825	.	-	0	ID=cds-TMQ37396.1;Parent=gene-AO053_07220;Dbxref=NCBI_GP:TMQ37396.1;Name=TMQ37396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701417.1;locus_tag=AO053_07220;product=C4-dicarboxylate ABC transporter permease;protein_id=TMQ37396.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	4890	5876	.	-	.	ID=gene-AO053_07225;Name=AO053_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07225
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	4890	5876	.	-	0	ID=cds-TMQ37404.1;Parent=gene-AO053_07225;Dbxref=NCBI_GP:TMQ37404.1;Name=TMQ37404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660884.1;locus_tag=AO053_07225;product=sialic acid-binding protein;protein_id=TMQ37404.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	6228	6914	.	+	.	ID=gene-AO053_07230;Name=AO053_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07230
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	6228	6914	.	+	0	ID=cds-TMQ37397.1;Parent=gene-AO053_07230;Dbxref=NCBI_GP:TMQ37397.1;Name=TMQ37397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689955.1;locus_tag=AO053_07230;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=TMQ37397.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	6959	7861	.	+	.	ID=gene-AO053_07235;Name=AO053_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07235
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	6959	7861	.	+	0	ID=cds-TMQ37398.1;Parent=gene-AO053_07235;Dbxref=NCBI_GP:TMQ37398.1;Name=TMQ37398.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UFU9.1;locus_tag=AO053_07235;product=N-acetylmannosamine kinase;protein_id=TMQ37398.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	7854	8720	.	+	.	ID=gene-AO053_07240;Name=AO053_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07240
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	7854	8720	.	+	0	ID=cds-TMQ37399.1;Parent=gene-AO053_07240;Dbxref=NCBI_GP:TMQ37399.1;Name=TMQ37399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996323.1;locus_tag=AO053_07240;product=N-acetylmannosamine kinase;protein_id=TMQ37399.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	8731	9612	.	+	.	ID=gene-AO053_07245;Name=AO053_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07245
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	8731	9612	.	+	0	ID=cds-TMQ37400.1;Parent=gene-AO053_07245;Dbxref=NCBI_GP:TMQ37400.1;Name=TMQ37400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44539.1;locus_tag=AO053_07245;product=N-acetylneuraminate lyase;protein_id=TMQ37400.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	9897	10709	.	+	.	ID=gene-AO053_07250;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=AO053_07250
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	9897	10709	.	+	0	ID=cds-TMQ37401.1;Parent=gene-AO053_07250;Dbxref=NCBI_GP:TMQ37401.1;Name=TMQ37401.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526527.1;locus_tag=AO053_07250;product=glucosamine-6-phosphate deaminase;protein_id=TMQ37401.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	10763	11908	.	+	.	ID=gene-AO053_07255;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AO053_07255
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	10763	11908	.	+	0	ID=cds-TMQ37402.1;Parent=gene-AO053_07255;Dbxref=NCBI_GP:TMQ37402.1;Name=TMQ37402.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668150.1;locus_tag=AO053_07255;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=TMQ37402.1;transl_table=11
GCA_005888185.1|LNKP01000088.1	Genbank	gene	12105	13202	.	-	.	ID=gene-AO053_07260;Name=AO053_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07260
GCA_005888185.1|LNKP01000088.1	Protein Homology	CDS	12105	13202	.	-	0	ID=cds-TMQ37403.1;Parent=gene-AO053_07260;Dbxref=NCBI_GP:TMQ37403.1;Name=TMQ37403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527540.1;locus_tag=AO053_07260;product=hypothetical protein;protein_id=TMQ37403.1;transl_table=11
##sequence-region LNKP01000089.1 1 28058
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000089.1	Genbank	region	1	28058	.	+	.	ID=LNKP01000089.1:1..28058;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000089.1	Genbank	gene	1	436	.	-	.	ID=gene-AO053_07265;Name=AO053_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07265;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	1	436	.	-	0	ID=cds-TMQ37355.1;Parent=gene-AO053_07265;Dbxref=NCBI_GP:TMQ37355.1;Name=TMQ37355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QP49.1;locus_tag=AO053_07265;partial=true;product=ribonuclease H;protein_id=TMQ37355.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	497	1267	.	+	.	ID=gene-AO053_07270;Name=AO053_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07270
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	497	1267	.	+	0	ID=cds-TMQ37356.1;Parent=gene-AO053_07270;Dbxref=NCBI_GP:TMQ37356.1;Name=TMQ37356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694424.1;locus_tag=AO053_07270;product=DNA polymerase III subunit epsilon;protein_id=TMQ37356.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	1355	1431	.	+	.	ID=gene-AO053_07275;Name=AO053_07275;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_07275
GCA_005888185.1|LNKP01000089.1	tRNAscan-SE	tRNA	1355	1431	.	+	.	ID=rna-AO053_07275;Parent=gene-AO053_07275;anticodon=(pos:1389..1391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07275;product=tRNA-Asp
GCA_005888185.1|LNKP01000089.1	tRNAscan-SE	exon	1355	1431	.	+	.	ID=exon-AO053_07275-1;Parent=rna-AO053_07275;anticodon=(pos:1389..1391);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07275;product=tRNA-Asp
GCA_005888185.1|LNKP01000089.1	Genbank	gene	1455	1531	.	+	.	ID=gene-AO053_07280;Name=AO053_07280;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_07280
GCA_005888185.1|LNKP01000089.1	tRNAscan-SE	tRNA	1455	1531	.	+	.	ID=rna-AO053_07280;Parent=gene-AO053_07280;anticodon=(pos:1489..1491);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07280;product=tRNA-Asp
GCA_005888185.1|LNKP01000089.1	tRNAscan-SE	exon	1455	1531	.	+	.	ID=exon-AO053_07280-1;Parent=rna-AO053_07280;anticodon=(pos:1489..1491);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07280;product=tRNA-Asp
GCA_005888185.1|LNKP01000089.1	Genbank	gene	1947	3461	.	+	.	ID=gene-AO053_07285;Name=AO053_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07285
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	1947	3461	.	+	0	ID=cds-TMQ37357.1;Parent=gene-AO053_07285;Dbxref=NCBI_GP:TMQ37357.1;Name=TMQ37357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658087.1;locus_tag=AO053_07285;product=ribosome-associated GTPase EngA;protein_id=TMQ37357.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	3522	4730	.	-	.	ID=gene-AO053_07290;Name=AO053_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07290
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	3522	4730	.	-	0	ID=cds-TMQ37358.1;Parent=gene-AO053_07290;Dbxref=NCBI_GP:TMQ37358.1;Name=TMQ37358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526521.1;locus_tag=AO053_07290;product=sugar transporter;protein_id=TMQ37358.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	4730	5905	.	-	.	ID=gene-AO053_07295;Name=AO053_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07295
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	4730	5905	.	-	0	ID=cds-TMQ37359.1;Parent=gene-AO053_07295;Dbxref=NCBI_GP:TMQ37359.1;Name=TMQ37359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649598.1;locus_tag=AO053_07295;product=hypothetical protein;protein_id=TMQ37359.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	5909	6496	.	-	.	ID=gene-AO053_07300;Name=AO053_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07300
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	5909	6496	.	-	0	ID=cds-TMQ37360.1;Parent=gene-AO053_07300;Dbxref=NCBI_GP:TMQ37360.1;Name=TMQ37360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630145.1;locus_tag=AO053_07300;product=deoxycytidine triphosphate deaminase;protein_id=TMQ37360.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	6505	7146	.	-	.	ID=gene-AO053_07305;Name=AO053_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07305
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	6505	7146	.	-	0	ID=cds-TMQ37361.1;Parent=gene-AO053_07305;Dbxref=NCBI_GP:TMQ37361.1;Name=TMQ37361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UB17.1;locus_tag=AO053_07305;product=uridine kinase;protein_id=TMQ37361.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	7367	8683	.	-	.	ID=gene-AO053_07310;Name=AO053_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07310
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	7367	8683	.	-	0	ID=cds-TMQ37362.1;Parent=gene-AO053_07310;Dbxref=NCBI_GP:TMQ37362.1;Name=TMQ37362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637490.1;locus_tag=AO053_07310;product=permease;protein_id=TMQ37362.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	8917	9447	.	+	.	ID=gene-AO053_07315;Name=AO053_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07315
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	8917	9447	.	+	0	ID=cds-TMQ37363.1;Parent=gene-AO053_07315;Dbxref=NCBI_GP:TMQ37363.1;Name=TMQ37363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640779.1;locus_tag=AO053_07315;product=inorganic pyrophosphatase;protein_id=TMQ37363.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	9566	9641	.	-	.	ID=gene-AO053_07320;Name=AO053_07320;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_07320
GCA_005888185.1|LNKP01000089.1	tRNAscan-SE	tRNA	9566	9641	.	-	.	ID=rna-AO053_07320;Parent=gene-AO053_07320;anticodon=(pos:complement(9606..9608));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07320;product=tRNA-Lys
GCA_005888185.1|LNKP01000089.1	tRNAscan-SE	exon	9566	9641	.	-	.	ID=exon-AO053_07320-1;Parent=rna-AO053_07320;anticodon=(pos:complement(9606..9608));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07320;product=tRNA-Lys
GCA_005888185.1|LNKP01000089.1	Genbank	gene	9796	10257	.	-	.	ID=gene-AO053_07325;Name=AO053_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07325
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	9796	10257	.	-	0	ID=cds-TMQ37364.1;Parent=gene-AO053_07325;Dbxref=NCBI_GP:TMQ37364.1;Name=TMQ37364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055001.1;locus_tag=AO053_07325;product=peptidoglycan-associated lipoprotein;protein_id=TMQ37364.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	10281	11564	.	-	.	ID=gene-AO053_07330;Name=AO053_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07330
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	10281	11564	.	-	0	ID=cds-TMQ37365.1;Parent=gene-AO053_07330;Dbxref=NCBI_GP:TMQ37365.1;Name=TMQ37365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626967.1;locus_tag=AO053_07330;product=translocation protein TolB;protein_id=TMQ37365.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	11606	12724	.	-	.	ID=gene-AO053_07335;Name=AO053_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07335
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	11606	12724	.	-	0	ID=cds-TMQ37366.1;Parent=gene-AO053_07335;Dbxref=NCBI_GP:TMQ37366.1;Name=TMQ37366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44678.1;locus_tag=AO053_07335;product=protein TolA;protein_id=TMQ37366.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	12740	13159	.	-	.	ID=gene-AO053_07340;Name=AO053_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07340
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	12740	13159	.	-	0	ID=cds-TMQ37367.1;Parent=gene-AO053_07340;Dbxref=NCBI_GP:TMQ37367.1;Name=TMQ37367.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43769.1;locus_tag=AO053_07340;product=protein TolR;protein_id=TMQ37367.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	13230	13916	.	-	.	ID=gene-AO053_07345;Name=AO053_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07345
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	13230	13916	.	-	0	ID=cds-TMQ37368.1;Parent=gene-AO053_07345;Dbxref=NCBI_GP:TMQ37368.1;Name=TMQ37368.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43768.1;locus_tag=AO053_07345;product=protein TolQ;protein_id=TMQ37368.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	13933	14343	.	-	.	ID=gene-AO053_07350;Name=AO053_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07350
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	13933	14343	.	-	0	ID=cds-TMQ37369.1;Parent=gene-AO053_07350;Dbxref=NCBI_GP:TMQ37369.1;Name=TMQ37369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526516.1;locus_tag=AO053_07350;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=TMQ37369.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	14669	16591	.	+	.	ID=gene-AO053_07355;Name=AO053_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07355
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	14669	16591	.	+	0	ID=cds-TMQ37370.1;Parent=gene-AO053_07355;Dbxref=NCBI_GP:TMQ37370.1;Name=TMQ37370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44680.1;locus_tag=AO053_07355;product=ATP-dependent helicase;protein_id=TMQ37370.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	16604	17314	.	+	.	ID=gene-AO053_07360;Name=AO053_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07360
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	16604	17314	.	+	0	ID=cds-TMQ37371.1;Parent=gene-AO053_07360;Dbxref=NCBI_GP:TMQ37371.1;Name=TMQ37371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641674.1;locus_tag=AO053_07360;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=TMQ37371.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	17339	17890	.	+	.	ID=gene-AO053_07365;Name=AO053_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07365
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	17339	17890	.	+	0	ID=cds-TMQ37372.1;Parent=gene-AO053_07365;Dbxref=NCBI_GP:TMQ37372.1;Name=TMQ37372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659875.1;locus_tag=AO053_07365;product=hypothetical protein;protein_id=TMQ37372.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	17933	19621	.	+	.	ID=gene-AO053_07370;Name=AO053_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07370
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	17933	19621	.	+	0	ID=cds-TMQ37373.1;Parent=gene-AO053_07370;Dbxref=NCBI_GP:TMQ37373.1;Name=TMQ37373.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688783.1;locus_tag=AO053_07370;product=long-chain fatty acid--CoA ligase;protein_id=TMQ37373.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	19678	20820	.	+	.	ID=gene-AO053_07375;Name=AO053_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07375
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	19678	20820	.	+	0	ID=cds-TMQ37380.1;Parent=gene-AO053_07375;Dbxref=NCBI_GP:TMQ37380.1;Name=TMQ37380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691465.1;locus_tag=AO053_07375;product=ribonuclease D;protein_id=TMQ37380.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	20863	22743	.	-	.	ID=gene-AO053_07380;Name=AO053_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07380
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	20863	22743	.	-	0	ID=cds-TMQ37374.1;Parent=gene-AO053_07380;Dbxref=NCBI_GP:TMQ37374.1;Name=TMQ37374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526512.1;locus_tag=AO053_07380;product=acyltransferase;protein_id=TMQ37374.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	22817	23908	.	-	.	ID=gene-AO053_07385;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AO053_07385
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	22817	23908	.	-	0	ID=cds-TMQ37375.1;Parent=gene-AO053_07385;Dbxref=NCBI_GP:TMQ37375.1;Name=TMQ37375.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44681.2;locus_tag=AO053_07385;product=GTP-binding protein;protein_id=TMQ37375.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	23957	24541	.	-	.	ID=gene-AO053_07390;Name=AO053_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07390
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	23957	24541	.	-	0	ID=cds-TMQ37376.1;Parent=gene-AO053_07390;Dbxref=NCBI_GP:TMQ37376.1;Name=TMQ37376.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNE8.1;locus_tag=AO053_07390;product=peptidyl-tRNA hydrolase;protein_id=TMQ37376.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	24724	25032	.	+	.	ID=gene-AO053_07395;Name=AO053_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07395
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	24724	25032	.	+	0	ID=cds-TMQ37377.1;Parent=gene-AO053_07395;Dbxref=NCBI_GP:TMQ37377.1;Name=TMQ37377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA93.1;locus_tag=AO053_07395;product=protein RnfH;protein_id=TMQ37377.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	25035	26249	.	+	.	ID=gene-AO053_07400;Name=AO053_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07400
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	25035	26249	.	+	0	ID=cds-TMQ37378.1;Parent=gene-AO053_07400;Dbxref=NCBI_GP:TMQ37378.1;Name=TMQ37378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995098.1;locus_tag=AO053_07400;product=ribosomal oxygenase;protein_id=TMQ37378.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	gene	26251	27570	.	+	.	ID=gene-AO053_07405;Name=AO053_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07405
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	26251	27570	.	+	0	ID=cds-TMQ37379.1;Parent=gene-AO053_07405;Dbxref=NCBI_GP:TMQ37379.1;Name=TMQ37379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688769.1;locus_tag=AO053_07405;product=exodeoxyribonuclease VII large subunit;protein_id=TMQ37379.1;transl_table=11
GCA_005888185.1|LNKP01000089.1	Genbank	pseudogene	27703	28058	.	+	.	ID=gene-AO053_07410;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=pseudogene;locus_tag=AO053_07410;pseudo=true
GCA_005888185.1|LNKP01000089.1	Protein Homology	CDS	27703	28058	.	+	0	ID=cds-AO053_07410;Parent=gene-AO053_07410;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44684.1;locus_tag=AO053_07410;pseudo=true;transl_table=11
##sequence-region LNKP01000090.1 1 9024
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000090.1	Genbank	region	1	9024	.	+	.	ID=LNKP01000090.1:1..9024;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000090.1	Genbank	pseudogene	1	277	.	+	.	ID=gene-AO053_07415;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=pseudogene;locus_tag=AO053_07415;pseudo=true
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	1	277	.	+	1	ID=cds-AO053_07415;Parent=gene-AO053_07415;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995100.1;locus_tag=AO053_07415;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	287	1108	.	+	.	ID=gene-AO053_07420;Name=AO053_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07420
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	287	1108	.	+	0	ID=cds-TMQ37300.1;Parent=gene-AO053_07420;Dbxref=NCBI_GP:TMQ37300.1;Name=TMQ37300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526507.1;locus_tag=AO053_07420;product=3'%2C5'-cyclic-nucleotide phosphodiesterase;protein_id=TMQ37300.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	1206	1493	.	-	.	ID=gene-AO053_07425;Name=AO053_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07425
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	1206	1493	.	-	0	ID=cds-TMQ37301.1;Parent=gene-AO053_07425;Dbxref=NCBI_GP:TMQ37301.1;Name=TMQ37301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44686.1;locus_tag=AO053_07425;product=hypothetical protein;protein_id=TMQ37301.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	1701	3050	.	+	.	ID=gene-AO053_07430;Name=AO053_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07430
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	1701	3050	.	+	0	ID=cds-TMQ37302.1;Parent=gene-AO053_07430;Dbxref=NCBI_GP:TMQ37302.1;Name=TMQ37302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526505.1;locus_tag=AO053_07430;product=hypothetical protein;protein_id=TMQ37302.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	3125	3664	.	+	.	ID=gene-AO053_07435;Name=AO053_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07435
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	3125	3664	.	+	0	ID=cds-TMQ37303.1;Parent=gene-AO053_07435;Dbxref=NCBI_GP:TMQ37303.1;Name=TMQ37303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44687.2;locus_tag=AO053_07435;product=cysteine methyltransferase;protein_id=TMQ37303.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	3661	4332	.	+	.	ID=gene-AO053_07440;Name=AO053_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07440
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	3661	4332	.	+	0	ID=cds-TMQ37304.1;Parent=gene-AO053_07440;Dbxref=NCBI_GP:TMQ37304.1;Name=TMQ37304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526503.1;locus_tag=AO053_07440;product=DNA mismatch repair protein MutH;protein_id=TMQ37304.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	4340	5632	.	-	.	ID=gene-AO053_07445;Name=AO053_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07445
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	4340	5632	.	-	0	ID=cds-TMQ37305.1;Parent=gene-AO053_07445;Dbxref=NCBI_GP:TMQ37305.1;Name=TMQ37305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526502.1;locus_tag=AO053_07445;product=tRNA(Ile)-lysidine synthase;protein_id=TMQ37305.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	5809	6756	.	-	.	ID=gene-AO053_07450;Name=AO053_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07450
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	5809	6756	.	-	0	ID=cds-TMQ37306.1;Parent=gene-AO053_07450;Dbxref=NCBI_GP:TMQ37306.1;Name=TMQ37306.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995107.1;locus_tag=AO053_07450;product=acetyl-CoA carboxylase subunit alpha;protein_id=TMQ37306.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	6845	7630	.	-	.	ID=gene-AO053_07455;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=AO053_07455
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	6845	7630	.	-	0	ID=cds-TMQ37307.1;Parent=gene-AO053_07455;Dbxref=NCBI_GP:TMQ37307.1;Name=TMQ37307.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633994.1;locus_tag=AO053_07455;product=high-affinity zinc transporter membrane component;protein_id=TMQ37307.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	gene	7630	8436	.	-	.	ID=gene-AO053_07460;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=AO053_07460
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	7630	8436	.	-	0	ID=cds-TMQ37308.1;Parent=gene-AO053_07460;Dbxref=NCBI_GP:TMQ37308.1;Name=TMQ37308.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766697.1;locus_tag=AO053_07460;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=TMQ37308.1;transl_table=11
GCA_005888185.1|LNKP01000090.1	Genbank	pseudogene	8616	9024	.	+	.	ID=gene-AO053_07465;Name=AO053_07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_07465;pseudo=true
GCA_005888185.1|LNKP01000090.1	Protein Homology	CDS	8616	9024	.	+	0	ID=cds-AO053_07465;Parent=gene-AO053_07465;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666534.1;locus_tag=AO053_07465;pseudo=true;transl_table=11
##sequence-region LNKP01000091.1 1 7068
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000091.1	Genbank	region	1	7068	.	+	.	ID=LNKP01000091.1:1..7068;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000091.1	Genbank	gene	1	1010	.	+	.	ID=gene-AO053_07470;Name=AO053_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07470;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000091.1	Protein Homology	CDS	1	1010	.	+	2	ID=cds-TMQ37283.1;Parent=gene-AO053_07470;Dbxref=NCBI_GP:TMQ37283.1;Name=TMQ37283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666534.1;locus_tag=AO053_07470;partial=true;product=peptidase M23;protein_id=TMQ37283.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000091.1	Genbank	gene	1125	2081	.	+	.	ID=gene-AO053_07475;Name=AO053_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07475
GCA_005888185.1|LNKP01000091.1	Protein Homology	CDS	1125	2081	.	+	0	ID=cds-TMQ37284.1;Parent=gene-AO053_07475;Dbxref=NCBI_GP:TMQ37284.1;Name=TMQ37284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630049.1;locus_tag=AO053_07475;product=transcriptional regulator;protein_id=TMQ37284.1;transl_table=11
GCA_005888185.1|LNKP01000091.1	Genbank	gene	2178	2453	.	-	.	ID=gene-AO053_07480;Name=AO053_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07480
GCA_005888185.1|LNKP01000091.1	Protein Homology	CDS	2178	2453	.	-	0	ID=cds-TMQ37285.1;Parent=gene-AO053_07480;Dbxref=NCBI_GP:TMQ37285.1;Name=TMQ37285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995110.1;locus_tag=AO053_07480;product=RNA-binding protein hfq;protein_id=TMQ37285.1;transl_table=11
GCA_005888185.1|LNKP01000091.1	Genbank	gene	2544	3512	.	-	.	ID=gene-AO053_07485;Name=AO053_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07485
GCA_005888185.1|LNKP01000091.1	Protein Homology	CDS	2544	3512	.	-	0	ID=cds-TMQ37286.1;Parent=gene-AO053_07485;Dbxref=NCBI_GP:TMQ37286.1;Name=TMQ37286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652168.1;locus_tag=AO053_07485;product=23S rRNA pseudouridylate synthase;protein_id=TMQ37286.1;transl_table=11
GCA_005888185.1|LNKP01000091.1	Genbank	gene	3933	6740	.	+	.	ID=gene-AO053_07490;Name=AO053_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07490
GCA_005888185.1|LNKP01000091.1	Protein Homology	CDS	3933	6740	.	+	0	ID=cds-TMQ37287.1;Parent=gene-AO053_07490;Dbxref=NCBI_GP:TMQ37287.1;Name=TMQ37287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526497.1;locus_tag=AO053_07490;product=ribonuclease E;protein_id=TMQ37287.1;transl_table=11
##sequence-region LNKP01000092.1 1 639
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000092.1	Genbank	region	1	639	.	+	.	ID=LNKP01000092.1:1..639;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000092.1	Genbank	gene	1	639	.	+	.	ID=gene-AO053_07495;Name=AO053_07495;end_range=639,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07495;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000092.1	Protein Homology	CDS	1	639	.	+	0	ID=cds-TMQ37249.1;Parent=gene-AO053_07495;Dbxref=NCBI_GP:TMQ37249.1;Name=TMQ37249.1;end_range=639,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526496.1;locus_tag=AO053_07495;partial=true;product=hypothetical protein;protein_id=TMQ37249.1;start_range=.,1;transl_table=11
##sequence-region LNKP01000093.1 1 1979
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000093.1	Genbank	region	1	1979	.	+	.	ID=LNKP01000093.1:1..1979;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000093.1	Genbank	pseudogene	1	182	.	+	.	ID=gene-AO053_07500;Name=AO053_07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_07500;pseudo=true
GCA_005888185.1|LNKP01000093.1	GeneMarkS+	CDS	1	182	.	+	2	ID=cds-AO053_07500;Parent=gene-AO053_07500;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_07500;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000093.1	Genbank	gene	372	1163	.	+	.	ID=gene-AO053_07505;Name=AO053_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07505
GCA_005888185.1|LNKP01000093.1	Protein Homology	CDS	372	1163	.	+	0	ID=cds-TMQ37242.1;Parent=gene-AO053_07505;Dbxref=NCBI_GP:TMQ37242.1;Name=TMQ37242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGS9.1;locus_tag=AO053_07505;product=hydroxyethylthiazole kinase;protein_id=TMQ37242.1;transl_table=11
GCA_005888185.1|LNKP01000093.1	Genbank	gene	1156	1965	.	+	.	ID=gene-AO053_07510;Name=AO053_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07510
GCA_005888185.1|LNKP01000093.1	Protein Homology	CDS	1156	1965	.	+	0	ID=cds-TMQ37243.1;Parent=gene-AO053_07510;Dbxref=NCBI_GP:TMQ37243.1;Name=TMQ37243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550422.1;locus_tag=AO053_07510;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=TMQ37243.1;transl_table=11
##sequence-region LNKP01000094.1 1 22374
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000094.1	Genbank	region	1	22374	.	+	.	ID=LNKP01000094.1:1..22374;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000094.1	Genbank	gene	6	668	.	+	.	ID=gene-AO053_07515;Name=AO053_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07515
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	6	668	.	+	0	ID=cds-TMQ37237.1;Parent=gene-AO053_07515;Dbxref=NCBI_GP:TMQ37237.1;Name=TMQ37237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701633.1;locus_tag=AO053_07515;product=thiamine-phosphate pyrophosphorylase;protein_id=TMQ37237.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	613	1956	.	+	.	ID=gene-AO053_07520;Name=AO053_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07520
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	613	1956	.	+	0	ID=cds-TMQ37214.1;Parent=gene-AO053_07520;Dbxref=NCBI_GP:TMQ37214.1;Name=TMQ37214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527444.1;locus_tag=AO053_07520;product=metabolite transport protein;protein_id=TMQ37214.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	2125	3507	.	+	.	ID=gene-AO053_07525;Name=AO053_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07525
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	2125	3507	.	+	0	ID=cds-TMQ37215.1;Parent=gene-AO053_07525;Dbxref=NCBI_GP:TMQ37215.1;Name=TMQ37215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44700.1;locus_tag=AO053_07525;product=protease;protein_id=TMQ37215.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	3772	4071	.	+	.	ID=gene-AO053_07530;Name=AO053_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07530
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	3772	4071	.	+	0	ID=cds-TMQ37216.1;Parent=gene-AO053_07530;Dbxref=NCBI_GP:TMQ37216.1;Name=TMQ37216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995116.1;locus_tag=AO053_07530;product=hypothetical protein;protein_id=TMQ37216.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	4061	4579	.	+	.	ID=gene-AO053_07535;Name=AO053_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07535
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	4061	4579	.	+	0	ID=cds-TMQ37217.1;Parent=gene-AO053_07535;Dbxref=NCBI_GP:TMQ37217.1;Name=TMQ37217.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055021.1;locus_tag=AO053_07535;product=GCN5 family acetyltransferase;protein_id=TMQ37217.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	4725	5495	.	-	.	ID=gene-AO053_07540;Name=AO053_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07540
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	4725	5495	.	-	0	ID=cds-TMQ37218.1;Parent=gene-AO053_07540;Dbxref=NCBI_GP:TMQ37218.1;Name=TMQ37218.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055022.1;locus_tag=AO053_07540;product=hypothetical protein;protein_id=TMQ37218.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	5668	6987	.	-	.	ID=gene-AO053_07545;Name=AO053_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07545
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	5668	6987	.	-	0	ID=cds-TMQ37219.1;Parent=gene-AO053_07545;Dbxref=NCBI_GP:TMQ37219.1;Name=TMQ37219.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44701.1;locus_tag=AO053_07545;product=ATP-dependent RNA helicase SrmB;protein_id=TMQ37219.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	7057	7755	.	+	.	ID=gene-AO053_07550;Name=AO053_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07550
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	7057	7755	.	+	0	ID=cds-TMQ37220.1;Parent=gene-AO053_07550;Dbxref=NCBI_GP:TMQ37220.1;Name=TMQ37220.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652144.1;locus_tag=AO053_07550;product=tRNA (adenine-N6)-methyltransferase;protein_id=TMQ37220.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	7787	8842	.	-	.	ID=gene-AO053_07555;Name=AO053_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07555
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	7787	8842	.	-	0	ID=cds-TMQ37221.1;Parent=gene-AO053_07555;Dbxref=NCBI_GP:TMQ37221.1;Name=TMQ37221.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526487.1;locus_tag=AO053_07555;product=rRNA methyltransferase;protein_id=TMQ37221.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	8989	10356	.	+	.	ID=gene-AO053_07560;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=AO053_07560
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	8989	10356	.	+	0	ID=cds-TMQ37222.1;Parent=gene-AO053_07560;Dbxref=NCBI_GP:TMQ37222.1;Name=TMQ37222.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44704.1;locus_tag=AO053_07560;product=phosphatidylserine synthase;protein_id=TMQ37222.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	10402	11127	.	-	.	ID=gene-AO053_07565;Name=AO053_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07565
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	10402	11127	.	-	0	ID=cds-TMQ37223.1;Parent=gene-AO053_07565;Dbxref=NCBI_GP:TMQ37223.1;Name=TMQ37223.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44705.1;locus_tag=AO053_07565;product=fatty acid metabolism transcriptional regulator FadR;protein_id=TMQ37223.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	11252	12796	.	+	.	ID=gene-AO053_07570;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=AO053_07570
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	11252	12796	.	+	0	ID=cds-TMQ37224.1;Parent=gene-AO053_07570;Dbxref=NCBI_GP:TMQ37224.1;Name=TMQ37224.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNB8.2;locus_tag=AO053_07570;product=sodium:proton antiporter;protein_id=TMQ37224.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	12806	13339	.	+	.	ID=gene-AO053_07575;Name=AO053_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07575
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	12806	13339	.	+	0	ID=cds-TMQ37225.1;Parent=gene-AO053_07575;Dbxref=NCBI_GP:TMQ37225.1;Name=TMQ37225.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649288.1;locus_tag=AO053_07575;product=disulfide bond formation protein B;protein_id=TMQ37225.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	13393	15225	.	-	.	ID=gene-AO053_07580;Name=AO053_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07580
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	13393	15225	.	-	0	ID=cds-TMQ37226.1;Parent=gene-AO053_07580;Dbxref=NCBI_GP:TMQ37226.1;Name=TMQ37226.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355475.1;locus_tag=AO053_07580;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=TMQ37226.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	15338	15610	.	-	.	ID=gene-AO053_07585;Name=AO053_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07585
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	15338	15610	.	-	0	ID=cds-TMQ37227.1;Parent=gene-AO053_07585;Dbxref=NCBI_GP:TMQ37227.1;Name=TMQ37227.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355477.1;locus_tag=AO053_07585;product=DNA-binding protein;protein_id=TMQ37227.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	15750	16340	.	-	.	ID=gene-AO053_07590;Name=AO053_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07590
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	15750	16340	.	-	0	ID=cds-TMQ37228.1;Parent=gene-AO053_07590;Dbxref=NCBI_GP:TMQ37228.1;Name=TMQ37228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649296.1;locus_tag=AO053_07590;product=hypothetical protein;protein_id=TMQ37228.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	16376	17170	.	-	.	ID=gene-AO053_07595;Name=AO053_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07595
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	16376	17170	.	-	0	ID=cds-TMQ37229.1;Parent=gene-AO053_07595;Dbxref=NCBI_GP:TMQ37229.1;Name=TMQ37229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526480.1;locus_tag=AO053_07595;product=NADH pyrophosphatase;protein_id=TMQ37229.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	17237	17833	.	-	.	ID=gene-AO053_07600;Name=AO053_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07600
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	17237	17833	.	-	0	ID=cds-TMQ37230.1;Parent=gene-AO053_07600;Dbxref=NCBI_GP:TMQ37230.1;Name=TMQ37230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526479.1;locus_tag=AO053_07600;product=Fe/S biogenesis protein NfuA;protein_id=TMQ37230.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	17909	18595	.	-	.	ID=gene-AO053_07605;Name=AO053_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07605
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	17909	18595	.	-	0	ID=cds-TMQ37231.1;Parent=gene-AO053_07605;Dbxref=NCBI_GP:TMQ37231.1;Name=TMQ37231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701645.1;locus_tag=AO053_07605;product=competence protein ComF;protein_id=TMQ37231.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	18608	19945	.	-	.	ID=gene-AO053_07610;Name=AO053_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07610
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	18608	19945	.	-	0	ID=cds-TMQ37232.1;Parent=gene-AO053_07610;Dbxref=NCBI_GP:TMQ37232.1;Name=TMQ37232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P31772.2;locus_tag=AO053_07610;product=secretin;protein_id=TMQ37232.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	19955	20368	.	-	.	ID=gene-AO053_07615;Name=AO053_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07615
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	19955	20368	.	-	0	ID=cds-TMQ37233.1;Parent=gene-AO053_07615;Dbxref=NCBI_GP:TMQ37233.1;Name=TMQ37233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526476.1;locus_tag=AO053_07615;product=competence protein;protein_id=TMQ37233.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	20365	20886	.	-	.	ID=gene-AO053_07620;Name=AO053_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07620
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	20365	20886	.	-	0	ID=cds-TMQ37234.1;Parent=gene-AO053_07620;Dbxref=NCBI_GP:TMQ37234.1;Name=TMQ37234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652122.1;locus_tag=AO053_07620;product=competence protein C;protein_id=TMQ37234.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	20883	21389	.	-	.	ID=gene-AO053_07625;Name=AO053_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07625
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	20883	21389	.	-	0	ID=cds-TMQ37235.1;Parent=gene-AO053_07625;Dbxref=NCBI_GP:TMQ37235.1;Name=TMQ37235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526474.1;locus_tag=AO053_07625;product=competence protein B;protein_id=TMQ37235.1;transl_table=11
GCA_005888185.1|LNKP01000094.1	Genbank	gene	21390	22187	.	-	.	ID=gene-AO053_07630;Name=AO053_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07630
GCA_005888185.1|LNKP01000094.1	Protein Homology	CDS	21390	22187	.	-	0	ID=cds-TMQ37236.1;Parent=gene-AO053_07630;Dbxref=NCBI_GP:TMQ37236.1;Name=TMQ37236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961684.1;locus_tag=AO053_07630;product=competence protein ComA;protein_id=TMQ37236.1;transl_table=11
##sequence-region LNKP01000095.1 1 1746
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000095.1	Genbank	region	1	1746	.	+	.	ID=LNKP01000095.1:1..1746;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000095.1	Genbank	gene	1	1746	.	+	.	ID=gene-AO053_07635;Name=AO053_07635;end_range=1746,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07635;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000095.1	Protein Homology	CDS	1	1746	.	+	1	ID=cds-TMQ37182.1;Parent=gene-AO053_07635;Dbxref=NCBI_GP:TMQ37182.1;Name=TMQ37182.1;end_range=1746,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272051.1;locus_tag=AO053_07635;partial=true;product=penicillin-binding protein;protein_id=TMQ37182.1;start_range=.,1;transl_table=11
##sequence-region LNKP01000096.1 1 79109
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000096.1	Genbank	region	1	79109	.	+	.	ID=LNKP01000096.1:1..79109;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000096.1	Genbank	pseudogene	1	766	.	+	.	ID=gene-AO053_07640;Name=AO053_07640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_07640;pseudo=true
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	1	766	.	+	1	ID=cds-AO053_07640;Parent=gene-AO053_07640;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995137.1;locus_tag=AO053_07640;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	839	1684	.	+	.	ID=gene-AO053_07645;Name=AO053_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07645
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	839	1684	.	+	0	ID=cds-TMQ37079.1;Parent=gene-AO053_07645;Dbxref=NCBI_GP:TMQ37079.1;Name=TMQ37079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995138.1;locus_tag=AO053_07645;product=rRNA methyltransferase;protein_id=TMQ37079.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	1836	2165	.	+	.	ID=gene-AO053_07650;Name=AO053_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07650
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	1836	2165	.	+	0	ID=cds-TMQ37080.1;Parent=gene-AO053_07650;Dbxref=NCBI_GP:TMQ37080.1;Name=TMQ37080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B8F5Q7.1;locus_tag=AO053_07650;product=hypothetical protein;protein_id=TMQ37080.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	2296	2898	.	+	.	ID=gene-AO053_07655;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AO053_07655
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	2296	2898	.	+	0	ID=cds-TMQ37081.1;Parent=gene-AO053_07655;Dbxref=NCBI_GP:TMQ37081.1;Name=TMQ37081.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:SwissProt:P44712.1;locus_tag=AO053_07655;product=recombination protein RecR;protein_id=TMQ37081.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	2914	4869	.	+	.	ID=gene-AO053_07660;Name=AO053_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07660
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	2914	4869	.	+	0	ID=cds-TMQ37082.1;Parent=gene-AO053_07660;Dbxref=NCBI_GP:TMQ37082.1;Name=TMQ37082.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691383.1;locus_tag=AO053_07660;product=DNA topoisomerase III;protein_id=TMQ37082.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	4977	5318	.	+	.	ID=gene-AO053_07665;Name=AO053_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07665
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	4977	5318	.	+	0	ID=cds-TMQ37083.1;Parent=gene-AO053_07665;Dbxref=NCBI_GP:TMQ37083.1;Name=TMQ37083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641246.1;locus_tag=AO053_07665;product=preprotein translocase subunit SecG;protein_id=TMQ37083.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	5343	5428	.	+	.	ID=gene-AO053_07670;Name=AO053_07670;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_07670
GCA_005888185.1|LNKP01000096.1	tRNAscan-SE	tRNA	5343	5428	.	+	.	ID=rna-AO053_07670;Parent=gene-AO053_07670;anticodon=(pos:5377..5379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07670;product=tRNA-Leu
GCA_005888185.1|LNKP01000096.1	tRNAscan-SE	exon	5343	5428	.	+	.	ID=exon-AO053_07670-1;Parent=rna-AO053_07670;anticodon=(pos:5377..5379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_07670;product=tRNA-Leu
GCA_005888185.1|LNKP01000096.1	Genbank	gene	5855	7525	.	-	.	ID=gene-AO053_07675;Name=AO053_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07675
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	5855	7525	.	-	0	ID=cds-TMQ37084.1;Parent=gene-AO053_07675;Dbxref=NCBI_GP:TMQ37084.1;Name=TMQ37084.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662586.1;locus_tag=AO053_07675;product=PTS fructose transporter subunit IIBC;protein_id=TMQ37084.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	7527	8468	.	-	.	ID=gene-AO053_07680;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=AO053_07680
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	7527	8468	.	-	0	ID=cds-TMQ37085.1;Parent=gene-AO053_07680;Dbxref=NCBI_GP:TMQ37085.1;Name=TMQ37085.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=EXISTENCE: similar to AA sequence:SwissProt:P44330.1;locus_tag=AO053_07680;product=1-phosphofructokinase;protein_id=TMQ37085.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	8470	9969	.	-	.	ID=gene-AO053_07685;Name=AO053_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07685
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	8470	9969	.	-	0	ID=cds-TMQ37086.1;Parent=gene-AO053_07685;Dbxref=NCBI_GP:TMQ37086.1;Name=TMQ37086.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44715.1;locus_tag=AO053_07685;product=bifunctional PTS fructose transporter subunit IIA/HPr protein;protein_id=TMQ37086.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	10041	10571	.	-	.	ID=gene-AO053_07690;Name=AO053_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07690
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	10041	10571	.	-	0	ID=cds-TMQ37087.1;Parent=gene-AO053_07690;Dbxref=NCBI_GP:TMQ37087.1;Name=TMQ37087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526465.1;locus_tag=AO053_07690;product=hypothetical protein;protein_id=TMQ37087.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	10644	11942	.	-	.	ID=gene-AO053_07695;Name=AO053_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07695
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	10644	11942	.	-	0	ID=cds-TMQ37088.1;Parent=gene-AO053_07695;Dbxref=NCBI_GP:TMQ37088.1;Name=TMQ37088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686919.1;locus_tag=AO053_07695;product=hypothetical protein;protein_id=TMQ37088.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	11993	12517	.	-	.	ID=gene-AO053_07700;Name=AO053_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07700
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	11993	12517	.	-	0	ID=cds-TMQ37089.1;Parent=gene-AO053_07700;Dbxref=NCBI_GP:TMQ37089.1;Name=TMQ37089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701678.1;locus_tag=AO053_07700;product=hypothetical protein;protein_id=TMQ37089.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	12544	13326	.	-	.	ID=gene-AO053_07705;Name=AO053_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07705
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	12544	13326	.	-	0	ID=cds-TMQ37090.1;Parent=gene-AO053_07705;Dbxref=NCBI_GP:TMQ37090.1;Name=TMQ37090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527430.1;locus_tag=AO053_07705;product=DNAse;protein_id=TMQ37090.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	13383	14366	.	-	.	ID=gene-AO053_07710;Name=AO053_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07710
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	13383	14366	.	-	0	ID=cds-TMQ37091.1;Parent=gene-AO053_07710;Dbxref=NCBI_GP:TMQ37091.1;Name=TMQ37091.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526461.1;locus_tag=AO053_07710;product=DNA polymerase III subunit delta';protein_id=TMQ37091.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	14672	16651	.	+	.	ID=gene-AO053_07715;Name=AO053_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07715
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	14672	16651	.	+	0	ID=cds-TMQ37092.1;Parent=gene-AO053_07715;Dbxref=NCBI_GP:TMQ37092.1;Name=TMQ37092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995148.1;locus_tag=AO053_07715;product=autotransporter;protein_id=TMQ37092.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	16828	17487	.	-	.	ID=gene-AO053_07720;Name=AO053_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07720
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	16828	17487	.	-	0	ID=cds-TMQ37093.1;Parent=gene-AO053_07720;Dbxref=NCBI_GP:TMQ37093.1;Name=TMQ37093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626134.1;locus_tag=AO053_07720;product=thymidylate kinase;protein_id=TMQ37093.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	17477	18520	.	-	.	ID=gene-AO053_07725;Name=AO053_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07725
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	17477	18520	.	-	0	ID=cds-TMQ37094.1;Parent=gene-AO053_07725;Dbxref=NCBI_GP:TMQ37094.1;Name=TMQ37094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272066.1;locus_tag=AO053_07725;product=aminodeoxychorismate lyase;protein_id=TMQ37094.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	18590	19525	.	-	.	ID=gene-AO053_07730;Name=AO053_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07730
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	18590	19525	.	-	0	ID=cds-TMQ37095.1;Parent=gene-AO053_07730;Dbxref=NCBI_GP:TMQ37095.1;Name=TMQ37095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961676.1;locus_tag=AO053_07730;product=peptidylprolyl isomerase;protein_id=TMQ37095.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	19601	20140	.	-	.	ID=gene-AO053_07735;Name=AO053_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07735
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	19601	20140	.	-	0	ID=cds-TMQ37096.1;Parent=gene-AO053_07735;Dbxref=NCBI_GP:TMQ37096.1;Name=TMQ37096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44722.1;locus_tag=AO053_07735;product=uracil phosphoribosyltransferase;protein_id=TMQ37096.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	20272	21063	.	+	.	ID=gene-AO053_07740;Name=AO053_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07740
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	20272	21063	.	+	0	ID=cds-TMQ37097.1;Parent=gene-AO053_07740;Dbxref=NCBI_GP:TMQ37097.1;Name=TMQ37097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656509.1;locus_tag=AO053_07740;product=nucleoside triphosphate hydrolase;protein_id=TMQ37097.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	21113	21988	.	-	.	ID=gene-AO053_07745;Name=AO053_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07745
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	21113	21988	.	-	0	ID=cds-TMQ37098.1;Parent=gene-AO053_07745;Dbxref=NCBI_GP:TMQ37098.1;Name=TMQ37098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526456.1;locus_tag=AO053_07745;product=hypothetical protein;protein_id=TMQ37098.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	22181	24592	.	+	.	ID=gene-AO053_07750;Name=AO053_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07750
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	22181	24592	.	+	0	ID=cds-TMQ37099.1;Parent=gene-AO053_07750;Dbxref=NCBI_GP:TMQ37099.1;Name=TMQ37099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550398.1;locus_tag=AO053_07750;product=DNA-binding protein;protein_id=TMQ37099.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	24708	25859	.	+	.	ID=gene-AO053_07755;Name=AO053_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07755
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	24708	25859	.	+	0	ID=cds-TMQ37100.1;Parent=gene-AO053_07755;Dbxref=NCBI_GP:TMQ37100.1;Name=TMQ37100.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688712.1;locus_tag=AO053_07755;product=coproporphyrinogen III oxidase;protein_id=TMQ37100.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	25992	26651	.	+	.	ID=gene-AO053_07760;Name=AO053_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07760
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	25992	26651	.	+	0	ID=cds-TMQ37101.1;Parent=gene-AO053_07760;Dbxref=NCBI_GP:TMQ37101.1;Name=TMQ37101.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526453.1;locus_tag=AO053_07760;product=ribose-5-phosphate isomerase;protein_id=TMQ37101.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	26681	27913	.	+	.	ID=gene-AO053_07765;Name=AO053_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07765
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	26681	27913	.	+	0	ID=cds-TMQ37102.1;Parent=gene-AO053_07765;Dbxref=NCBI_GP:TMQ37102.1;Name=TMQ37102.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43885.1;locus_tag=AO053_07765;product=D-3-phosphoglycerate dehydrogenase;protein_id=TMQ37102.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	27957	28799	.	-	.	ID=gene-AO053_07770;Name=AO053_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07770
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	27957	28799	.	-	0	ID=cds-TMQ37103.1;Parent=gene-AO053_07770;Dbxref=NCBI_GP:TMQ37103.1;Name=TMQ37103.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652074.1;locus_tag=AO053_07770;product=hypothetical protein;protein_id=TMQ37103.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	28809	29672	.	-	.	ID=gene-AO053_07775;Name=AO053_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07775
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	28809	29672	.	-	0	ID=cds-TMQ37104.1;Parent=gene-AO053_07775;Dbxref=NCBI_GP:TMQ37104.1;Name=TMQ37104.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272075.1;locus_tag=AO053_07775;product=hypothetical protein;protein_id=TMQ37104.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	29691	29957	.	-	.	ID=gene-AO053_07780;Name=AO053_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07780
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	29691	29957	.	-	0	ID=cds-TMQ37150.1;Parent=gene-AO053_07780;Dbxref=NCBI_GP:TMQ37150.1;Name=TMQ37150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055054.1;locus_tag=AO053_07780;product=hypothetical protein;protein_id=TMQ37150.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	30120	31031	.	+	.	ID=gene-AO053_07785;Name=AO053_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07785
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	30120	31031	.	+	0	ID=cds-TMQ37105.1;Parent=gene-AO053_07785;Dbxref=NCBI_GP:TMQ37105.1;Name=TMQ37105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691345.1;locus_tag=AO053_07785;product=ATP phosphoribosyltransferase;protein_id=TMQ37105.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	31124	32407	.	+	.	ID=gene-AO053_07790;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=AO053_07790
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	31124	32407	.	+	0	ID=cds-TMQ37106.1;Parent=gene-AO053_07790;Dbxref=NCBI_GP:TMQ37106.1;Name=TMQ37106.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656530.1;locus_tag=AO053_07790;product=histidinol dehydrogenase;protein_id=TMQ37106.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	32521	33579	.	+	.	ID=gene-AO053_07795;Name=AO053_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07795
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	32521	33579	.	+	0	ID=cds-TMQ37107.1;Parent=gene-AO053_07795;Dbxref=NCBI_GP:TMQ37107.1;Name=TMQ37107.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701691.1;locus_tag=AO053_07795;product=histidinol-phosphate aminotransferase;protein_id=TMQ37107.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	33691	34779	.	+	.	ID=gene-AO053_07800;Name=AO053_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07800
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	33691	34779	.	+	0	ID=cds-TMQ37108.1;Parent=gene-AO053_07800;Dbxref=NCBI_GP:TMQ37108.1;Name=TMQ37108.1;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995163.1;locus_tag=AO053_07800;product=imidazoleglycerol-phosphate dehydratase;protein_id=TMQ37108.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	34845	35444	.	+	.	ID=gene-AO053_07805;Name=AO053_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07805
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	34845	35444	.	+	0	ID=cds-TMQ37109.1;Parent=gene-AO053_07805;Dbxref=NCBI_GP:TMQ37109.1;Name=TMQ37109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44340.1;locus_tag=AO053_07805;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=TMQ37109.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	35480	36229	.	+	.	ID=gene-AO053_07810;Name=AO053_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07810
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	35480	36229	.	+	0	ID=cds-TMQ37110.1;Parent=gene-AO053_07810;Dbxref=NCBI_GP:TMQ37110.1;Name=TMQ37110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995165.1;locus_tag=AO053_07810;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=TMQ37110.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	36211	36987	.	+	.	ID=gene-AO053_07815;Name=AO053_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07815
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	36211	36987	.	+	0	ID=cds-TMQ37111.1;Parent=gene-AO053_07815;Dbxref=NCBI_GP:TMQ37111.1;Name=TMQ37111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691335.1;locus_tag=AO053_07815;product=imidazole glycerol phosphate synthase cyclase subunit;protein_id=TMQ37111.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	36987	37652	.	+	.	ID=gene-AO053_07820;Name=AO053_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07820
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	36987	37652	.	+	0	ID=cds-TMQ37112.1;Parent=gene-AO053_07820;Dbxref=NCBI_GP:TMQ37112.1;Name=TMQ37112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44434.1;locus_tag=AO053_07820;product=phosphoribosyl-ATP pyrophosphatase;protein_id=TMQ37112.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	37916	39118	.	+	.	ID=gene-AO053_07825;Name=AO053_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07825
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	37916	39118	.	+	0	ID=cds-TMQ37113.1;Parent=gene-AO053_07825;Dbxref=NCBI_GP:TMQ37113.1;Name=TMQ37113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44727.1;locus_tag=AO053_07825;product=tyrosine transporter;protein_id=TMQ37113.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	39304	39732	.	-	.	ID=gene-AO053_07830;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=AO053_07830
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	39304	39732	.	-	0	ID=cds-TMQ37114.1;Parent=gene-AO053_07830;Dbxref=NCBI_GP:TMQ37114.1;Name=TMQ37114.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;inference=EXISTENCE: similar to AA sequence:SwissProt:P43718.1;locus_tag=AO053_07830;product=ATP synthase F0F1 subunit epsilon;protein_id=TMQ37114.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	39762	41135	.	-	.	ID=gene-AO053_07835;Name=AO053_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07835
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	39762	41135	.	-	0	ID=cds-TMQ37115.1;Parent=gene-AO053_07835;Dbxref=NCBI_GP:TMQ37115.1;Name=TMQ37115.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632228.1;locus_tag=AO053_07835;product=ATP synthase subunit beta;protein_id=TMQ37115.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	41152	42021	.	-	.	ID=gene-AO053_07840;Name=AO053_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07840
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	41152	42021	.	-	0	ID=cds-TMQ37116.1;Parent=gene-AO053_07840;Dbxref=NCBI_GP:TMQ37116.1;Name=TMQ37116.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995166.1;locus_tag=AO053_07840;product=ATP F0F1 synthase subunit gamma;protein_id=TMQ37116.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	42037	43578	.	-	.	ID=gene-AO053_07845;Name=AO053_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07845
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	42037	43578	.	-	0	ID=cds-TMQ37117.1;Parent=gene-AO053_07845;Dbxref=NCBI_GP:TMQ37117.1;Name=TMQ37117.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QN62.1;locus_tag=AO053_07845;product=ATP synthase subunit alpha;protein_id=TMQ37117.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	43591	44124	.	-	.	ID=gene-AO053_07850;Name=AO053_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07850
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	43591	44124	.	-	0	ID=cds-TMQ37118.1;Parent=gene-AO053_07850;Dbxref=NCBI_GP:TMQ37118.1;Name=TMQ37118.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064468.1;locus_tag=AO053_07850;product=ATP F0F1 synthase subunit delta;protein_id=TMQ37118.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	44137	44607	.	-	.	ID=gene-AO053_07855;Name=AO053_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07855
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	44137	44607	.	-	0	ID=cds-TMQ37119.1;Parent=gene-AO053_07855;Dbxref=NCBI_GP:TMQ37119.1;Name=TMQ37119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA07.1;locus_tag=AO053_07855;product=ATP synthase subunit B;protein_id=TMQ37119.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	44657	44911	.	-	.	ID=gene-AO053_07860;Name=AO053_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07860
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	44657	44911	.	-	0	ID=cds-TMQ37120.1;Parent=gene-AO053_07860;Dbxref=NCBI_GP:TMQ37120.1;Name=TMQ37120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA06.1;locus_tag=AO053_07860;product=ATP synthase subunit C;protein_id=TMQ37120.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	44967	45755	.	-	.	ID=gene-AO053_07865;Name=AO053_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07865
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	44967	45755	.	-	0	ID=cds-TMQ37121.1;Parent=gene-AO053_07865;Dbxref=NCBI_GP:TMQ37121.1;Name=TMQ37121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UA05.1;locus_tag=AO053_07865;product=ATP synthase F0F1 subunit A;protein_id=TMQ37121.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	45792	46166	.	-	.	ID=gene-AO053_07870;Name=AO053_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07870
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	45792	46166	.	-	0	ID=cds-TMQ37122.1;Parent=gene-AO053_07870;Dbxref=NCBI_GP:TMQ37122.1;Name=TMQ37122.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662542.1;locus_tag=AO053_07870;product=ATP F0F1 synthase subunit I;protein_id=TMQ37122.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	46292	46903	.	-	.	ID=gene-AO053_07875;Name=AO053_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07875
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	46292	46903	.	-	0	ID=cds-TMQ37123.1;Parent=gene-AO053_07875;Dbxref=NCBI_GP:TMQ37123.1;Name=TMQ37123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669355.1;locus_tag=AO053_07875;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=TMQ37123.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	47043	47420	.	-	.	ID=gene-AO053_07880;Name=AO053_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07880
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	47043	47420	.	-	0	ID=cds-TMQ37124.1;Parent=gene-AO053_07880;Dbxref=NCBI_GP:TMQ37124.1;Name=TMQ37124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691328.1;locus_tag=AO053_07880;product=hypothetical protein;protein_id=TMQ37124.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	47536	48138	.	+	.	ID=gene-AO053_07885;Name=AO053_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07885
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	47536	48138	.	+	0	ID=cds-TMQ37125.1;Parent=gene-AO053_07885;Dbxref=NCBI_GP:TMQ37125.1;Name=TMQ37125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688685.1;locus_tag=AO053_07885;product=hypothetical protein;protein_id=TMQ37125.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	48138	48611	.	+	.	ID=gene-AO053_07890;Name=AO053_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07890
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	48138	48611	.	+	0	ID=cds-TMQ37126.1;Parent=gene-AO053_07890;Dbxref=NCBI_GP:TMQ37126.1;Name=TMQ37126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666452.1;locus_tag=AO053_07890;product=hypothetical protein;protein_id=TMQ37126.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	48796	49299	.	+	.	ID=gene-AO053_07895;Name=AO053_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07895
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	48796	49299	.	+	0	ID=cds-TMQ37127.1;Parent=gene-AO053_07895;Dbxref=NCBI_GP:TMQ37127.1;Name=TMQ37127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5U9Z9.1;locus_tag=AO053_07895;product=S-ribosylhomocysteinase;protein_id=TMQ37127.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	49543	49800	.	+	.	ID=gene-AO053_07900;Name=AO053_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07900
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	49543	49800	.	+	0	ID=cds-TMQ37151.1;Parent=gene-AO053_07900;Dbxref=NCBI_GP:TMQ37151.1;Name=TMQ37151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691324.1;locus_tag=AO053_07900;product=acid phosphatase;protein_id=TMQ37151.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	49938	50153	.	+	.	ID=gene-AO053_07905;Name=AO053_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07905
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	49938	50153	.	+	0	ID=cds-TMQ37152.1;Parent=gene-AO053_07905;Dbxref=NCBI_GP:TMQ37152.1;Name=TMQ37152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656553.1;locus_tag=AO053_07905;product=S-ribosylhomocysteinase;protein_id=TMQ37152.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	50245	50952	.	-	.	ID=gene-AO053_07910;Name=AO053_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07910
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	50245	50952	.	-	0	ID=cds-TMQ37128.1;Parent=gene-AO053_07910;Dbxref=NCBI_GP:TMQ37128.1;Name=TMQ37128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527420.1;locus_tag=AO053_07910;product=acid phosphatase;protein_id=TMQ37128.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	51174	51701	.	+	.	ID=gene-AO053_07915;Name=AO053_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07915
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	51174	51701	.	+	0	ID=cds-TMQ37129.1;Parent=gene-AO053_07915;Dbxref=NCBI_GP:TMQ37129.1;Name=TMQ37129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538653.1;locus_tag=AO053_07915;product=ATP-dependent protease subunit HslV;protein_id=TMQ37129.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	51712	53046	.	+	.	ID=gene-AO053_07920;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AO053_07920
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	51712	53046	.	+	0	ID=cds-TMQ37130.1;Parent=gene-AO053_07920;Dbxref=NCBI_GP:TMQ37130.1;Name=TMQ37130.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693677.1;locus_tag=AO053_07920;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=TMQ37130.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	53116	54168	.	-	.	ID=gene-AO053_07925;Name=AO053_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07925
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	53116	54168	.	-	0	ID=cds-TMQ37131.1;Parent=gene-AO053_07925;Dbxref=NCBI_GP:TMQ37131.1;Name=TMQ37131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659745.1;locus_tag=AO053_07925;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=TMQ37131.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	54309	55604	.	+	.	ID=gene-AO053_07930;Name=AO053_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07930
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	54309	55604	.	+	0	ID=cds-TMQ37132.1;Parent=gene-AO053_07930;Dbxref=NCBI_GP:TMQ37132.1;Name=TMQ37132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629403.1;locus_tag=AO053_07930;product=oxidoreductase;protein_id=TMQ37132.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	55768	57210	.	+	.	ID=gene-AO053_07935;Name=AO053_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07935
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	55768	57210	.	+	0	ID=cds-TMQ37133.1;Parent=gene-AO053_07935;Dbxref=NCBI_GP:TMQ37133.1;Name=TMQ37133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649434.1;locus_tag=AO053_07935;product=recombinase RmuC;protein_id=TMQ37133.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	57372	57791	.	+	.	ID=gene-AO053_07940;Name=AO053_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07940
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	57372	57791	.	+	0	ID=cds-TMQ37134.1;Parent=gene-AO053_07940;Dbxref=NCBI_GP:TMQ37134.1;Name=TMQ37134.1;Note=cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose%3B RbsD is required for efficient ribose utilization in E. coli%3B rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666439.1;locus_tag=AO053_07940;product=D-ribose pyranase;protein_id=TMQ37134.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	57805	59286	.	+	.	ID=gene-AO053_07945;Name=AO053_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07945
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	57805	59286	.	+	0	ID=cds-TMQ37135.1;Parent=gene-AO053_07945;Dbxref=NCBI_GP:TMQ37135.1;Name=TMQ37135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686985.1;locus_tag=AO053_07945;product=sugar ABC transporter ATP-binding protein;protein_id=TMQ37135.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	59302	60270	.	+	.	ID=gene-AO053_07950;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=AO053_07950
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	59302	60270	.	+	0	ID=cds-TMQ37136.1;Parent=gene-AO053_07950;Dbxref=NCBI_GP:TMQ37136.1;Name=TMQ37136.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629198.1;locus_tag=AO053_07950;product=ribose ABC transporter permease;protein_id=TMQ37136.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	60290	61168	.	+	.	ID=gene-AO053_07955;Name=AO053_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07955
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	60290	61168	.	+	0	ID=cds-TMQ37137.1;Parent=gene-AO053_07955;Dbxref=NCBI_GP:TMQ37137.1;Name=TMQ37137.1;Note=periplasmic substrate-binding component of the ATP-dependent ribose transport system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995182.1;locus_tag=AO053_07955;product=D-ribose ABC transporter substrate-binding protein;protein_id=TMQ37137.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	61265	62185	.	+	.	ID=gene-AO053_07960;Name=AO053_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07960
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	61265	62185	.	+	0	ID=cds-TMQ37138.1;Parent=gene-AO053_07960;Dbxref=NCBI_GP:TMQ37138.1;Name=TMQ37138.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272090.1;locus_tag=AO053_07960;product=ribokinase;protein_id=TMQ37138.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	62213	63211	.	+	.	ID=gene-AO053_07965;Name=AO053_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07965
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	62213	63211	.	+	0	ID=cds-TMQ37139.1;Parent=gene-AO053_07965;Dbxref=NCBI_GP:TMQ37139.1;Name=TMQ37139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686992.1;locus_tag=AO053_07965;product=transcriptional regulator;protein_id=TMQ37139.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	63317	63868	.	+	.	ID=gene-AO053_07970;Name=AO053_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07970
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	63317	63868	.	+	0	ID=cds-TMQ37140.1;Parent=gene-AO053_07970;Dbxref=NCBI_GP:TMQ37140.1;Name=TMQ37140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UH14.1;locus_tag=AO053_07970;product=hypothetical protein;protein_id=TMQ37140.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	64008	64496	.	-	.	ID=gene-AO053_07975;Name=AO053_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07975
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	64008	64496	.	-	0	ID=cds-TMQ37141.1;Parent=gene-AO053_07975;Dbxref=NCBI_GP:TMQ37141.1;Name=TMQ37141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44738.1;locus_tag=AO053_07975;product=ribonuclease E activity regulator RraA;protein_id=TMQ37141.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	64548	65459	.	-	.	ID=gene-AO053_07980;Name=AO053_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07980
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	64548	65459	.	-	0	ID=cds-TMQ37142.1;Parent=gene-AO053_07980;Dbxref=NCBI_GP:TMQ37142.1;Name=TMQ37142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010868993.1;locus_tag=AO053_07980;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=TMQ37142.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	65521	66240	.	+	.	ID=gene-AO053_07985;Name=AO053_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07985
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	65521	66240	.	+	0	ID=cds-TMQ37143.1;Parent=gene-AO053_07985;Dbxref=NCBI_GP:TMQ37143.1;Name=TMQ37143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500438.1;locus_tag=AO053_07985;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=TMQ37143.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	66293	67237	.	-	.	ID=gene-AO053_07990;Name=AO053_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07990
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	66293	67237	.	-	0	ID=cds-TMQ37144.1;Parent=gene-AO053_07990;Dbxref=NCBI_GP:TMQ37144.1;Name=TMQ37144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527415.1;locus_tag=AO053_07990;product=tellurite resistance protein TehA;protein_id=TMQ37144.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	67431	71681	.	-	.	ID=gene-AO053_07995;Name=AO053_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_07995
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	67431	71681	.	-	0	ID=cds-TMQ37145.1;Parent=gene-AO053_07995;Dbxref=NCBI_GP:TMQ37145.1;Name=TMQ37145.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526426.1;locus_tag=AO053_07995;product=DNA-directed RNA polymerase subunit beta';protein_id=TMQ37145.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	71888	75919	.	-	.	ID=gene-AO053_08000;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AO053_08000
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	71888	75919	.	-	0	ID=cds-TMQ37146.1;Parent=gene-AO053_08000;Dbxref=NCBI_GP:TMQ37146.1;Name=TMQ37146.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;inference=EXISTENCE: similar to AA sequence:SwissProt:P43738.1;locus_tag=AO053_08000;product=DNA-directed RNA polymerase subunit beta;protein_id=TMQ37146.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	76302	76991	.	-	.	ID=gene-AO053_08005;Name=AO053_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08005
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	76302	76991	.	-	0	ID=cds-TMQ37147.1;Parent=gene-AO053_08005;Dbxref=NCBI_GP:TMQ37147.1;Name=TMQ37147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356869.1;locus_tag=AO053_08005;product=50S ribosomal protein L1;protein_id=TMQ37147.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	76996	77424	.	-	.	ID=gene-AO053_08010;Name=AO053_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08010
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	76996	77424	.	-	0	ID=cds-TMQ37148.1;Parent=gene-AO053_08010;Dbxref=NCBI_GP:TMQ37148.1;Name=TMQ37148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005763439.1;locus_tag=AO053_08010;product=50S ribosomal protein L11;protein_id=TMQ37148.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	gene	77596	78312	.	-	.	ID=gene-AO053_08015;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AO053_08015
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	77596	78312	.	-	0	ID=cds-TMQ37149.1;Parent=gene-AO053_08015;Dbxref=NCBI_GP:TMQ37149.1;Name=TMQ37149.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701710.1;locus_tag=AO053_08015;product=purine nucleoside phosphorylase;protein_id=TMQ37149.1;transl_table=11
GCA_005888185.1|LNKP01000096.1	Genbank	pseudogene	78396	79109	.	-	.	ID=gene-AO053_08020;Name=AO053_08020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08020;pseudo=true
GCA_005888185.1|LNKP01000096.1	Protein Homology	CDS	78396	79109	.	-	0	ID=cds-AO053_08020;Parent=gene-AO053_08020;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526424.1;locus_tag=AO053_08020;pseudo=true;transl_table=11
##sequence-region LNKP01000097.1 1 1732
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000097.1	Genbank	region	1	1732	.	+	.	ID=LNKP01000097.1:1..1732;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000097.1	Genbank	pseudogene	1	564	.	-	.	ID=gene-AO053_08025;Name=AO053_08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08025;pseudo=true
GCA_005888185.1|LNKP01000097.1	Protein Homology	CDS	1	564	.	-	0	ID=cds-AO053_08025;Parent=gene-AO053_08025;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44742.1;locus_tag=AO053_08025;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000097.1	Genbank	gene	663	1451	.	-	.	ID=gene-AO053_08030;Name=AO053_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08030
GCA_005888185.1|LNKP01000097.1	Protein Homology	CDS	663	1451	.	-	0	ID=cds-TMQ37050.1;Parent=gene-AO053_08030;Dbxref=NCBI_GP:TMQ37050.1;Name=TMQ37050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995191.1;locus_tag=AO053_08030;product=radical SAM protein;protein_id=TMQ37050.1;transl_table=11
GCA_005888185.1|LNKP01000097.1	Genbank	pseudogene	1460	1732	.	-	.	ID=gene-AO053_08035;Name=AO053_08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08035;pseudo=true
GCA_005888185.1|LNKP01000097.1	GeneMarkS+	CDS	1460	1732	.	-	0	ID=cds-AO053_08035;Parent=gene-AO053_08035;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_08035;pseudo=true;transl_table=11
##sequence-region LNKP01000098.1 1 21265
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000098.1	Genbank	region	1	21265	.	+	.	ID=LNKP01000098.1:1..21265;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000098.1	Genbank	gene	1	1272	.	-	.	ID=gene-AO053_08040;Name=AO053_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08040;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	1	1272	.	-	0	ID=cds-TMQ37025.1;Parent=gene-AO053_08040;Dbxref=NCBI_GP:TMQ37025.1;Name=TMQ37025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692077.1;locus_tag=AO053_08040;partial=true;product=hypothetical protein;protein_id=TMQ37025.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	1485	2141	.	+	.	ID=gene-AO053_08045;Name=AO053_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08045
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	1485	2141	.	+	0	ID=cds-TMQ37026.1;Parent=gene-AO053_08045;Dbxref=NCBI_GP:TMQ37026.1;Name=TMQ37026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649480.1;locus_tag=AO053_08045;product=hypothetical protein;protein_id=TMQ37026.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	2097	3137	.	-	.	ID=gene-AO053_08050;Name=AO053_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08050
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	2097	3137	.	-	0	ID=cds-TMQ37027.1;Parent=gene-AO053_08050;Dbxref=NCBI_GP:TMQ37027.1;Name=TMQ37027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692075.1;locus_tag=AO053_08050;product=hypothetical protein;protein_id=TMQ37027.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	3204	4283	.	-	.	ID=gene-AO053_08055;Name=AO053_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08055
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	3204	4283	.	-	0	ID=cds-TMQ37028.1;Parent=gene-AO053_08055;Dbxref=NCBI_GP:TMQ37028.1;Name=TMQ37028.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702948.1;locus_tag=AO053_08055;product=class II fructose-bisphosphate aldolase;protein_id=TMQ37028.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	4393	5553	.	-	.	ID=gene-AO053_08060;Name=AO053_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08060
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	4393	5553	.	-	0	ID=cds-TMQ37029.1;Parent=gene-AO053_08060;Dbxref=NCBI_GP:TMQ37029.1;Name=TMQ37029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658010.1;locus_tag=AO053_08060;product=phosphoglycerate kinase;protein_id=TMQ37029.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	5649	6443	.	-	.	ID=gene-AO053_08065;Name=AO053_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08065
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	5649	6443	.	-	0	ID=cds-TMQ37030.1;Parent=gene-AO053_08065;Dbxref=NCBI_GP:TMQ37030.1;Name=TMQ37030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995195.1;locus_tag=AO053_08065;product=ribonuclease HI;protein_id=TMQ37030.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	6521	6781	.	+	.	ID=gene-AO053_08070;Name=AO053_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08070
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	6521	6781	.	+	0	ID=cds-TMQ37031.1;Parent=gene-AO053_08070;Dbxref=NCBI_GP:TMQ37031.1;Name=TMQ37031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064693.1;locus_tag=AO053_08070;product=ferredoxin;protein_id=TMQ37031.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	6919	8139	.	-	.	ID=gene-AO053_08075;Name=AO053_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08075
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	6919	8139	.	-	0	ID=cds-TMQ37032.1;Parent=gene-AO053_08075;Dbxref=NCBI_GP:TMQ37032.1;Name=TMQ37032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995196.1;locus_tag=AO053_08075;product=tyrosine transporter;protein_id=TMQ37032.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	8176	8757	.	-	.	ID=gene-AO053_08080;Name=AO053_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08080
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	8176	8757	.	-	0	ID=cds-TMQ37033.1;Parent=gene-AO053_08080;Dbxref=NCBI_GP:TMQ37033.1;Name=TMQ37033.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526416.1;locus_tag=AO053_08080;product=thymidine kinase;protein_id=TMQ37033.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	8758	10539	.	-	.	ID=gene-AO053_08085;Name=AO053_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08085
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	8758	10539	.	-	0	ID=cds-TMQ37034.1;Parent=gene-AO053_08085;Dbxref=NCBI_GP:TMQ37034.1;Name=TMQ37034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015543633.1;locus_tag=AO053_08085;product=hypothetical protein;protein_id=TMQ37034.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	10552	11457	.	-	.	ID=gene-AO053_08090;Name=AO053_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08090
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	10552	11457	.	-	0	ID=cds-TMQ37043.1;Parent=gene-AO053_08090;Dbxref=NCBI_GP:TMQ37043.1;Name=TMQ37043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526414.1;locus_tag=AO053_08090;product=DNA adenine methylase;protein_id=TMQ37043.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	11460	12470	.	-	.	ID=gene-AO053_08095;Name=AO053_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08095
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	11460	12470	.	-	0	ID=cds-TMQ37035.1;Parent=gene-AO053_08095;Dbxref=NCBI_GP:TMQ37035.1;Name=TMQ37035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526413.1;locus_tag=AO053_08095;product=adenine methyltransferase;protein_id=TMQ37035.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	12494	13522	.	-	.	ID=gene-AO053_08100;Name=AO053_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08100
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	12494	13522	.	-	0	ID=cds-TMQ37036.1;Parent=gene-AO053_08100;Dbxref=NCBI_GP:TMQ37036.1;Name=TMQ37036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526412.1;locus_tag=AO053_08100;product=tRNA threonylcarbamoyl adenosine modification protein TsaD;protein_id=TMQ37036.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	13754	13969	.	+	.	ID=gene-AO053_08105;Name=AO053_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08105
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	13754	13969	.	+	0	ID=cds-TMQ37037.1;Parent=gene-AO053_08105;Dbxref=NCBI_GP:TMQ37037.1;Name=TMQ37037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VM96.1;locus_tag=AO053_08105;product=30S ribosomal protein S21;protein_id=TMQ37037.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	14103	15884	.	+	.	ID=gene-AO053_08110;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AO053_08110
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	14103	15884	.	+	0	ID=cds-TMQ37038.1;Parent=gene-AO053_08110;Dbxref=NCBI_GP:TMQ37038.1;Name=TMQ37038.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701718.1;locus_tag=AO053_08110;product=DNA primase;protein_id=TMQ37038.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	15954	17843	.	+	.	ID=gene-AO053_08115;Name=AO053_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08115
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	15954	17843	.	+	0	ID=cds-TMQ37039.1;Parent=gene-AO053_08115;Dbxref=NCBI_GP:TMQ37039.1;Name=TMQ37039.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527409.1;locus_tag=AO053_08115;product=RNA polymerase subunit sigma;protein_id=TMQ37039.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	18147	19565	.	-	.	ID=gene-AO053_08120;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=AO053_08120
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	18147	19565	.	-	0	ID=cds-TMQ37040.1;Parent=gene-AO053_08120;Dbxref=NCBI_GP:TMQ37040.1;Name=TMQ37040.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44324.1;locus_tag=AO053_08120;product=class II fumarate hydratase;protein_id=TMQ37040.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	19721	20536	.	-	.	ID=gene-AO053_08125;Name=AO053_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08125
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	19721	20536	.	-	0	ID=cds-TMQ37041.1;Parent=gene-AO053_08125;Dbxref=NCBI_GP:TMQ37041.1;Name=TMQ37041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526409.1;locus_tag=AO053_08125;product=urease accessory protein UreD;protein_id=TMQ37041.1;transl_table=11
GCA_005888185.1|LNKP01000098.1	Genbank	gene	20611	21246	.	-	.	ID=gene-AO053_08130;Name=AO053_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08130
GCA_005888185.1|LNKP01000098.1	Protein Homology	CDS	20611	21246	.	-	0	ID=cds-TMQ37042.1;Parent=gene-AO053_08130;Dbxref=NCBI_GP:TMQ37042.1;Name=TMQ37042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687034.1;locus_tag=AO053_08130;product=urease accessory protein UreG;protein_id=TMQ37042.1;transl_table=11
##sequence-region LNKP01000099.1 1 36944
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000099.1	Genbank	region	1	36944	.	+	.	ID=LNKP01000099.1:1..36944;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000099.1	Genbank	gene	117	824	.	-	.	ID=gene-AO053_08135;Name=AO053_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08135
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	117	824	.	-	0	ID=cds-TMQ36970.1;Parent=gene-AO053_08135;Dbxref=NCBI_GP:TMQ36970.1;Name=TMQ36970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QN11.1;locus_tag=AO053_08135;product=urease accessory protein UreF;protein_id=TMQ36970.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	809	1366	.	-	.	ID=gene-AO053_08140;Name=AO053_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08140
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	809	1366	.	-	0	ID=cds-TMQ36971.1;Parent=gene-AO053_08140;Dbxref=NCBI_GP:TMQ36971.1;Name=TMQ36971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660985.1;locus_tag=AO053_08140;product=urease accessory protein UreE;protein_id=TMQ36971.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	1494	3212	.	-	.	ID=gene-AO053_08145;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=AO053_08145
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	1494	3212	.	-	0	ID=cds-TMQ36972.1;Parent=gene-AO053_08145;Dbxref=NCBI_GP:TMQ36972.1;Name=TMQ36972.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706620.1;locus_tag=AO053_08145;product=urease subunit alpha;protein_id=TMQ36972.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	3224	3529	.	-	.	ID=gene-AO053_08150;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=AO053_08150
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	3224	3529	.	-	0	ID=cds-TMQ36973.1;Parent=gene-AO053_08150;Dbxref=NCBI_GP:TMQ36973.1;Name=TMQ36973.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta)%3B in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity%2C optimum growth%2C resistance to low-pH killing in-vitro and persistence in-vivo%2C while the other operon does not seem to be active;gbkey=CDS;gene=ureB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701724.1;locus_tag=AO053_08150;product=urease subunit beta;protein_id=TMQ36973.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	3606	3908	.	-	.	ID=gene-AO053_08155;Name=AO053_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08155
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	3606	3908	.	-	0	ID=cds-TMQ36974.1;Parent=gene-AO053_08155;Dbxref=NCBI_GP:TMQ36974.1;Name=TMQ36974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355722.1;locus_tag=AO053_08155;product=urease subunit gamma;protein_id=TMQ36974.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	4071	4361	.	+	.	ID=gene-AO053_08160;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=AO053_08160
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	4071	4361	.	+	0	ID=cds-TMQ36975.1;Parent=gene-AO053_08160;Dbxref=NCBI_GP:TMQ36975.1;Name=TMQ36975.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356907.1;locus_tag=AO053_08160;product=molecular chaperone GroES;protein_id=TMQ36975.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	4381	6027	.	+	.	ID=gene-AO053_08165;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=AO053_08165
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	4381	6027	.	+	0	ID=cds-TMQ36976.1;Parent=gene-AO053_08165;Dbxref=NCBI_GP:TMQ36976.1;Name=TMQ36976.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664451.1;locus_tag=AO053_08165;product=molecular chaperone GroEL;protein_id=TMQ36976.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	6200	6649	.	-	.	ID=gene-AO053_08170;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AO053_08170
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	6200	6649	.	-	0	ID=cds-TMQ36977.1;Parent=gene-AO053_08170;Dbxref=NCBI_GP:TMQ36977.1;Name=TMQ36977.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064775.1;locus_tag=AO053_08170;product=50S ribosomal protein L9;protein_id=TMQ36977.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	6666	6893	.	-	.	ID=gene-AO053_08175;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AO053_08175
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	6666	6893	.	-	0	ID=cds-TMQ36978.1;Parent=gene-AO053_08175;Dbxref=NCBI_GP:TMQ36978.1;Name=TMQ36978.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005705387.1;locus_tag=AO053_08175;product=30S ribosomal protein S18;protein_id=TMQ36978.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	6906	7232	.	-	.	ID=gene-AO053_08180;Name=AO053_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08180
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	6906	7232	.	-	0	ID=cds-TMQ36979.1;Parent=gene-AO053_08180;Dbxref=NCBI_GP:TMQ36979.1;Name=TMQ36979.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995205.1;locus_tag=AO053_08180;product=primosomal replication protein N;protein_id=TMQ36979.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	7219	7596	.	-	.	ID=gene-AO053_08185;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AO053_08185
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	7219	7596	.	-	0	ID=cds-TMQ36980.1;Parent=gene-AO053_08185;Dbxref=NCBI_GP:TMQ36980.1;Name=TMQ36980.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500411.1;locus_tag=AO053_08185;product=30S ribosomal protein S6;protein_id=TMQ36980.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	7796	8014	.	-	.	ID=gene-AO053_08190;Name=AO053_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08190
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	7796	8014	.	-	0	ID=cds-TMQ36981.1;Parent=gene-AO053_08190;Dbxref=NCBI_GP:TMQ36981.1;Name=TMQ36981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016955625.1;locus_tag=AO053_08190;product=translation initiation factor IF-1;protein_id=TMQ36981.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Protein Homology	pseudogene	8151	8966	.	+	.	ID=gene-AO053_08195;Name=AO053_08195;Note=disrupted;description=lipooligosaccharide biosynthesis protein lic2B;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08195;pseudo=true
GCA_005888185.1|LNKP01000099.1	Genbank	gene	9054	10049	.	+	.	ID=gene-AO053_08200;Name=AO053_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08200
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	9054	10049	.	+	0	ID=cds-TMQ36982.1;Parent=gene-AO053_08200;Dbxref=NCBI_GP:TMQ36982.1;Name=TMQ36982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115831.1;locus_tag=AO053_08200;product=hypothetical protein;protein_id=TMQ36982.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	10133	10996	.	+	.	ID=gene-AO053_08205;Name=AO053_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08205
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	10133	10996	.	+	0	ID=cds-TMQ36983.1;Parent=gene-AO053_08205;Dbxref=NCBI_GP:TMQ36983.1;Name=TMQ36983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692054.1;locus_tag=AO053_08205;product=rRNA methyltransferase;protein_id=TMQ36983.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Protein Homology	pseudogene	11035	11939	.	-	.	ID=gene-AO053_08210;Name=AO053_08210;Note=disrupted;description=lipooligosaccharide biosynthesis protein lex-1;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08210;pseudo=true
GCA_005888185.1|LNKP01000099.1	Genbank	gene	12058	12885	.	+	.	ID=gene-AO053_08215;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=AO053_08215
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	12058	12885	.	+	0	ID=cds-TMQ36984.1;Parent=gene-AO053_08215;Dbxref=NCBI_GP:TMQ36984.1;Name=TMQ36984.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639409.1;locus_tag=AO053_08215;product=diadenosine tetraphosphatase;protein_id=TMQ36984.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	12895	13518	.	+	.	ID=gene-AO053_08220;Name=AO053_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08220
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	12895	13518	.	+	0	ID=cds-TMQ36985.1;Parent=gene-AO053_08220;Dbxref=NCBI_GP:TMQ36985.1;Name=TMQ36985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550366.1;locus_tag=AO053_08220;product=hypothetical protein;protein_id=TMQ36985.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	13644	15098	.	-	.	ID=gene-AO053_08225;Name=AO053_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08225
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	13644	15098	.	-	0	ID=cds-TMQ36986.1;Parent=gene-AO053_08225;Dbxref=NCBI_GP:TMQ36986.1;Name=TMQ36986.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005714317.1;locus_tag=AO053_08225;product=6-phosphogluconate dehydrogenase;protein_id=TMQ36986.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	15121	15666	.	-	.	ID=gene-AO053_08230;Name=AO053_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08230
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	15121	15666	.	-	0	ID=cds-TMQ36987.1;Parent=gene-AO053_08230;Dbxref=NCBI_GP:TMQ36987.1;Name=TMQ36987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526400.1;locus_tag=AO053_08230;product=XRE family transcriptional regulator;protein_id=TMQ36987.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	15688	16254	.	-	.	ID=gene-AO053_08235;Name=AO053_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08235
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	15688	16254	.	-	0	ID=cds-TMQ36988.1;Parent=gene-AO053_08235;Dbxref=NCBI_GP:TMQ36988.1;Name=TMQ36988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526399.1;locus_tag=AO053_08235;product=phosphoribosyltransferase;protein_id=TMQ36988.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	16279	16980	.	-	.	ID=gene-AO053_08240;Name=AO053_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08240
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	16279	16980	.	-	0	ID=cds-TMQ36989.1;Parent=gene-AO053_08240;Dbxref=NCBI_GP:TMQ36989.1;Name=TMQ36989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526398.1;locus_tag=AO053_08240;product=6-phosphogluconolactonase;protein_id=TMQ36989.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	17069	18553	.	-	.	ID=gene-AO053_08245;Name=AO053_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08245
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	17069	18553	.	-	0	ID=cds-TMQ36990.1;Parent=gene-AO053_08245;Dbxref=NCBI_GP:TMQ36990.1;Name=TMQ36990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356969.1;locus_tag=AO053_08245;product=glucose-6-phosphate dehydrogenase;protein_id=TMQ36990.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	18629	19438	.	-	.	ID=gene-AO053_08250;Name=AO053_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08250
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	18629	19438	.	-	0	ID=cds-TMQ36991.1;Parent=gene-AO053_08250;Dbxref=NCBI_GP:TMQ36991.1;Name=TMQ36991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526396.1;locus_tag=AO053_08250;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=TMQ36991.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	19443	19859	.	-	.	ID=gene-AO053_08255;Name=AO053_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08255
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	19443	19859	.	-	0	ID=cds-TMQ36992.1;Parent=gene-AO053_08255;Dbxref=NCBI_GP:TMQ36992.1;Name=TMQ36992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526395.1;locus_tag=AO053_08255;product=hypothetical protein;protein_id=TMQ36992.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	19912	21900	.	-	.	ID=gene-AO053_08260;Name=AO053_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08260
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	19912	21900	.	-	0	ID=cds-TMQ36993.1;Parent=gene-AO053_08260;Dbxref=NCBI_GP:TMQ36993.1;Name=TMQ36993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44016.2;locus_tag=AO053_08260;product=oligopeptide transporter;protein_id=TMQ36993.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	22129	22524	.	+	.	ID=gene-AO053_08265;Name=AO053_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08265
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	22129	22524	.	+	0	ID=cds-TMQ36994.1;Parent=gene-AO053_08265;Dbxref=NCBI_GP:TMQ36994.1;Name=TMQ36994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44754.1;locus_tag=AO053_08265;product=heat-shock protein;protein_id=TMQ36994.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	22551	23003	.	-	.	ID=gene-AO053_08270;Name=AO053_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08270
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	22551	23003	.	-	0	ID=cds-TMQ36995.1;Parent=gene-AO053_08270;Dbxref=NCBI_GP:TMQ36995.1;Name=TMQ36995.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697406.1;locus_tag=AO053_08270;product=transcriptional regulator;protein_id=TMQ36995.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	23157	24149	.	+	.	ID=gene-AO053_08275;Name=AO053_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08275
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	23157	24149	.	+	0	ID=cds-TMQ36996.1;Parent=gene-AO053_08275;Dbxref=NCBI_GP:TMQ36996.1;Name=TMQ36996.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701738.1;locus_tag=AO053_08275;product=asparagine synthetase A;protein_id=TMQ36996.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	24214	24888	.	-	.	ID=gene-AO053_08280;Name=AO053_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08280
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	24214	24888	.	-	0	ID=cds-TMQ36997.1;Parent=gene-AO053_08280;Dbxref=NCBI_GP:TMQ36997.1;Name=TMQ36997.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526394.1;locus_tag=AO053_08280;product=phosphoglycolate phosphatase;protein_id=TMQ36997.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	24934	25608	.	-	.	ID=gene-AO053_08285;Name=AO053_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08285
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	24934	25608	.	-	0	ID=cds-TMQ36998.1;Parent=gene-AO053_08285;Dbxref=NCBI_GP:TMQ36998.1;Name=TMQ36998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995224.1;locus_tag=AO053_08285;product=ribulose phosphate epimerase;protein_id=TMQ36998.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	25760	28180	.	-	.	ID=gene-AO053_08290;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AO053_08290
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	25760	28180	.	-	0	ID=cds-TMQ36999.1;Parent=gene-AO053_08290;Dbxref=NCBI_GP:TMQ36999.1;Name=TMQ36999.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692029.1;locus_tag=AO053_08290;product=DNA gyrase subunit B;protein_id=TMQ36999.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	28306	30618	.	-	.	ID=gene-AO053_08295;Name=AO053_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08295
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	28306	30618	.	-	0	ID=cds-TMQ37000.1;Parent=gene-AO053_08295;Dbxref=NCBI_GP:TMQ37000.1;Name=TMQ37000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499558.1;locus_tag=AO053_08295;product=RNA-binding transcriptional accessory protein;protein_id=TMQ37000.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	30713	31189	.	+	.	ID=gene-AO053_08300;Name=AO053_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08300
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	30713	31189	.	+	0	ID=cds-TMQ37001.1;Parent=gene-AO053_08300;Dbxref=NCBI_GP:TMQ37001.1;Name=TMQ37001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526392.1;locus_tag=AO053_08300;product=transcription elongation factor GreB;protein_id=TMQ37001.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	31260	31877	.	-	.	ID=gene-AO053_08305;Name=AO053_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08305
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	31260	31877	.	-	0	ID=cds-TMQ37002.1;Parent=gene-AO053_08305;Dbxref=NCBI_GP:TMQ37002.1;Name=TMQ37002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649556.1;locus_tag=AO053_08305;product=GntR family transcriptional regulator;protein_id=TMQ37002.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	31877	32782	.	-	.	ID=gene-AO053_08310;Name=AO053_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08310
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	31877	32782	.	-	0	ID=cds-TMQ37003.1;Parent=gene-AO053_08310;Dbxref=NCBI_GP:TMQ37003.1;Name=TMQ37003.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44418.1;locus_tag=AO053_08310;product=transcriptional regulator;protein_id=TMQ37003.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	32906	33631	.	+	.	ID=gene-AO053_08315;Name=AO053_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08315
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	32906	33631	.	+	0	ID=cds-TMQ37004.1;Parent=gene-AO053_08315;Dbxref=NCBI_GP:TMQ37004.1;Name=TMQ37004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692022.1;locus_tag=AO053_08315;product=glutathione peroxidase;protein_id=TMQ37004.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	33723	33944	.	-	.	ID=gene-AO053_08320;Name=AO053_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08320
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	33723	33944	.	-	0	ID=cds-TMQ37005.1;Parent=gene-AO053_08320;Dbxref=NCBI_GP:TMQ37005.1;Name=TMQ37005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44759.1;locus_tag=AO053_08320;product=SlyX protein;protein_id=TMQ37005.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	34042	34767	.	+	.	ID=gene-AO053_08325;Name=AO053_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08325
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	34042	34767	.	+	0	ID=cds-TMQ37006.1;Parent=gene-AO053_08325;Dbxref=NCBI_GP:TMQ37006.1;Name=TMQ37006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44760.1;locus_tag=AO053_08325;product=peptidylprolyl isomerase;protein_id=TMQ37006.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	34857	35522	.	+	.	ID=gene-AO053_08330;Name=AO053_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08330
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	34857	35522	.	+	0	ID=cds-TMQ37007.1;Parent=gene-AO053_08330;Dbxref=NCBI_GP:TMQ37007.1;Name=TMQ37007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692020.1;locus_tag=AO053_08330;product=hypothetical protein;protein_id=TMQ37007.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	35522	35902	.	+	.	ID=gene-AO053_08335;Name=AO053_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08335
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	35522	35902	.	+	0	ID=cds-TMQ37008.1;Parent=gene-AO053_08335;Dbxref=NCBI_GP:TMQ37008.1;Name=TMQ37008.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499553.1;locus_tag=AO053_08335;product=sulfur relay protein TusD;protein_id=TMQ37008.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	35899	36258	.	+	.	ID=gene-AO053_08340;Name=AO053_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08340
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	35899	36258	.	+	0	ID=cds-TMQ37009.1;Parent=gene-AO053_08340;Dbxref=NCBI_GP:TMQ37009.1;Name=TMQ37009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644410.1;locus_tag=AO053_08340;product=sulfur relay protein TusC/DsrF;protein_id=TMQ37009.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	gene	36267	36554	.	+	.	ID=gene-AO053_08345;Name=AO053_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08345
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	36267	36554	.	+	0	ID=cds-TMQ37010.1;Parent=gene-AO053_08345;Dbxref=NCBI_GP:TMQ37010.1;Name=TMQ37010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526387.1;locus_tag=AO053_08345;product=hypothetical protein;protein_id=TMQ37010.1;transl_table=11
GCA_005888185.1|LNKP01000099.1	Genbank	pseudogene	36685	36944	.	-	.	ID=gene-AO053_08350;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO053_08350;pseudo=true
GCA_005888185.1|LNKP01000099.1	Protein Homology	CDS	36685	36944	.	-	2	ID=cds-AO053_08350;Parent=gene-AO053_08350;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759586.1;locus_tag=AO053_08350;pseudo=true;transl_table=11
##sequence-region LNKP01000100.1 1 6572
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000100.1	Genbank	region	1	6572	.	+	.	ID=LNKP01000100.1:1..6572;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000100.1	Genbank	gene	109	645	.	-	.	ID=gene-AO053_08355;Name=AO053_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08355
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	109	645	.	-	0	ID=cds-TMQ36916.1;Parent=gene-AO053_08355;Dbxref=NCBI_GP:TMQ36916.1;Name=TMQ36916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654957.1;locus_tag=AO053_08355;product=DNA transformation protein;protein_id=TMQ36916.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	gene	1082	2146	.	+	.	ID=gene-AO053_08360;Name=AO053_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08360
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	1082	2146	.	+	0	ID=cds-TMQ36917.1;Parent=gene-AO053_08360;Dbxref=NCBI_GP:TMQ36917.1;Name=TMQ36917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651076.1;locus_tag=AO053_08360;product=DNA recombination/repair protein RecA;protein_id=TMQ36917.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	gene	2226	2684	.	+	.	ID=gene-AO053_08365;Name=AO053_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08365
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	2226	2684	.	+	0	ID=cds-TMQ36918.1;Parent=gene-AO053_08365;Dbxref=NCBI_GP:TMQ36918.1;Name=TMQ36918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654961.1;locus_tag=AO053_08365;product=RecX family transcriptional regulator;protein_id=TMQ36918.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	gene	2681	3067	.	-	.	ID=gene-AO053_08370;Name=AO053_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08370
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	2681	3067	.	-	0	ID=cds-TMQ36919.1;Parent=gene-AO053_08370;Dbxref=NCBI_GP:TMQ36919.1;Name=TMQ36919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694571.1;locus_tag=AO053_08370;product=chromosome condensation protein CrcB;protein_id=TMQ36919.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	gene	3067	3885	.	-	.	ID=gene-AO053_08375;Name=AO053_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08375
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	3067	3885	.	-	0	ID=cds-TMQ36920.1;Parent=gene-AO053_08375;Dbxref=NCBI_GP:TMQ36920.1;Name=TMQ36920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44771.1;locus_tag=AO053_08375;product=hypothetical protein;protein_id=TMQ36920.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	gene	4282	5286	.	+	.	ID=gene-AO053_08380;Name=AO053_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08380
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	4282	5286	.	+	0	ID=cds-TMQ36921.1;Parent=gene-AO053_08380;Dbxref=NCBI_GP:TMQ36921.1;Name=TMQ36921.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44770.1;locus_tag=AO053_08380;product=ornithine carbamoyltransferase;protein_id=TMQ36921.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	gene	5296	6228	.	+	.	ID=gene-AO053_08385;Name=AO053_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08385
GCA_005888185.1|LNKP01000100.1	Protein Homology	CDS	5296	6228	.	+	0	ID=cds-TMQ36922.1;Parent=gene-AO053_08385;Dbxref=NCBI_GP:TMQ36922.1;Name=TMQ36922.1;Note=reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692790.1;locus_tag=AO053_08385;product=carbamate kinase;protein_id=TMQ36922.1;transl_table=11
GCA_005888185.1|LNKP01000100.1	Genbank	pseudogene	6333	6572	.	+	.	ID=gene-AO053_08390;Name=AO053_08390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08390;pseudo=true
GCA_005888185.1|LNKP01000100.1	GeneMarkS+	CDS	6333	6572	.	+	0	ID=cds-AO053_08390;Parent=gene-AO053_08390;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_08390;pseudo=true;transl_table=11
##sequence-region LNKP01000101.1 1 29036
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000101.1	Genbank	region	1	29036	.	+	.	ID=LNKP01000101.1:1..29036;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000101.1	Genbank	gene	1	1268	.	+	.	ID=gene-AO053_08395;Name=AO053_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08395;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	1	1268	.	+	2	ID=cds-TMQ36873.1;Parent=gene-AO053_08395;Dbxref=NCBI_GP:TMQ36873.1;Name=TMQ36873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995319.1;locus_tag=AO053_08395;partial=true;product=hypothetical protein;protein_id=TMQ36873.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Protein Homology	pseudogene	1762	4778	.	+	.	ID=gene-AO053_08400;Name=AO053_08400;Note=disrupted;description=ligand-gated channel protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08400;pseudo=true
GCA_005888185.1|LNKP01000101.1	Genbank	gene	4955	6871	.	+	.	ID=gene-AO053_08405;Name=AO053_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08405
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	4955	6871	.	+	0	ID=cds-TMQ36874.1;Parent=gene-AO053_08405;Dbxref=NCBI_GP:TMQ36874.1;Name=TMQ36874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629954.1;locus_tag=AO053_08405;product=ABC transporter ATP-binding protein;protein_id=TMQ36874.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	6881	7417	.	+	.	ID=gene-AO053_08410;Name=AO053_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08410
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	6881	7417	.	+	0	ID=cds-TMQ36875.1;Parent=gene-AO053_08410;Dbxref=NCBI_GP:TMQ36875.1;Name=TMQ36875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054643.1;locus_tag=AO053_08410;product=hypothetical protein;protein_id=TMQ36875.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	7433	7984	.	+	.	ID=gene-AO053_08415;Name=AO053_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08415
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	7433	7984	.	+	0	ID=cds-TMQ36876.1;Parent=gene-AO053_08415;Dbxref=NCBI_GP:TMQ36876.1;Name=TMQ36876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688145.1;locus_tag=AO053_08415;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=TMQ36876.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	7988	8806	.	+	.	ID=gene-AO053_08420;Name=AO053_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08420
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	7988	8806	.	+	0	ID=cds-TMQ36877.1;Parent=gene-AO053_08420;Dbxref=NCBI_GP:TMQ36877.1;Name=TMQ36877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665181.1;locus_tag=AO053_08420;product=shikimate dehydrogenase;protein_id=TMQ36877.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	8803	9360	.	+	.	ID=gene-AO053_08425;Name=AO053_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08425
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	8803	9360	.	+	0	ID=cds-TMQ36878.1;Parent=gene-AO053_08425;Dbxref=NCBI_GP:TMQ36878.1;Name=TMQ36878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654536.1;locus_tag=AO053_08425;product=DNA-3-methyladenine glycosidase;protein_id=TMQ36878.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	9357	10121	.	-	.	ID=gene-AO053_08430;Name=AO053_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08430
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	9357	10121	.	-	0	ID=cds-TMQ36879.1;Parent=gene-AO053_08430;Dbxref=NCBI_GP:TMQ36879.1;Name=TMQ36879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701787.1;locus_tag=AO053_08430;product=glycosyltransferase;protein_id=TMQ36879.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	10184	11467	.	+	.	ID=gene-AO053_08435;Name=AO053_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08435
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	10184	11467	.	+	0	ID=cds-TMQ36880.1;Parent=gene-AO053_08435;Dbxref=NCBI_GP:TMQ36880.1;Name=TMQ36880.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44806.1;locus_tag=AO053_08435;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=TMQ36880.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	11464	11934	.	+	.	ID=gene-AO053_08440;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AO053_08440
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	11464	11934	.	+	0	ID=cds-TMQ36881.1;Parent=gene-AO053_08440;Dbxref=NCBI_GP:TMQ36881.1;Name=TMQ36881.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638492.1;locus_tag=AO053_08440;product=phosphopantetheine adenylyltransferase;protein_id=TMQ36881.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	11931	12143	.	+	.	ID=gene-AO053_08445;Name=AO053_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08445
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	11931	12143	.	+	0	ID=cds-TMQ36882.1;Parent=gene-AO053_08445;Dbxref=NCBI_GP:TMQ36882.1;Name=TMQ36882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526333.1;locus_tag=AO053_08445;product=hypothetical protein;protein_id=TMQ36882.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	12149	14164	.	+	.	ID=gene-AO053_08450;Name=AO053_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08450
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	12149	14164	.	+	0	ID=cds-TMQ36883.1;Parent=gene-AO053_08450;Dbxref=NCBI_GP:TMQ36883.1;Name=TMQ36883.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526334.1;locus_tag=AO053_08450;product=ATP-dependent DNA helicase Rep;protein_id=TMQ36883.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	14263	15150	.	-	.	ID=gene-AO053_08455;Name=AO053_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08455
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	14263	15150	.	-	0	ID=cds-TMQ36884.1;Parent=gene-AO053_08455;Dbxref=NCBI_GP:TMQ36884.1;Name=TMQ36884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672408.1;locus_tag=AO053_08455;product=LysR family transcriptional regulator;protein_id=TMQ36884.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	15263	15841	.	+	.	ID=gene-AO053_08460;Name=AO053_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08460
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	15263	15841	.	+	0	ID=cds-TMQ36885.1;Parent=gene-AO053_08460;Dbxref=NCBI_GP:TMQ36885.1;Name=TMQ36885.1;Note=involved in drug resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44803.1;locus_tag=AO053_08460;product=NADPH quinone reductase MdaB;protein_id=TMQ36885.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Protein Homology	pseudogene	15905	16551	.	-	.	ID=gene-AO053_08465;Name=rimO;Note=disrupted;description=ribosomal protein S12 methylthiotransferase RimO;gbkey=Gene;gene=rimO;gene_biotype=pseudogene;locus_tag=AO053_08465;pseudo=true
GCA_005888185.1|LNKP01000101.1	Genbank	gene	16753	17469	.	+	.	ID=gene-AO053_08470;Name=AO053_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08470
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	16753	17469	.	+	0	ID=cds-TMQ36886.1;Parent=gene-AO053_08470;Dbxref=NCBI_GP:TMQ36886.1;Name=TMQ36886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501104.1;locus_tag=AO053_08470;product=hypothetical protein;protein_id=TMQ36886.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	17635	18750	.	+	.	ID=gene-AO053_08475;Name=AO053_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08475
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	17635	18750	.	+	0	ID=cds-TMQ36887.1;Parent=gene-AO053_08475;Dbxref=NCBI_GP:TMQ36887.1;Name=TMQ36887.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44801.1;locus_tag=AO053_08475;product=aspartate-semialdehyde dehydrogenase;protein_id=TMQ36887.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	18805	19740	.	+	.	ID=gene-AO053_08480;Name=AO053_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08480
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	18805	19740	.	+	0	ID=cds-TMQ36888.1;Parent=gene-AO053_08480;Dbxref=NCBI_GP:TMQ36888.1;Name=TMQ36888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672415.1;locus_tag=AO053_08480;product=hydrolase;protein_id=TMQ36888.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	19859	19952	.	+	.	ID=gene-AO053_08485;Name=AO053_08485;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_08485
GCA_005888185.1|LNKP01000101.1	tRNAscan-SE	tRNA	19859	19952	.	+	.	ID=rna-AO053_08485;Parent=gene-AO053_08485;anticodon=(pos:19894..19896);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_08485;product=tRNA-Ser
GCA_005888185.1|LNKP01000101.1	tRNAscan-SE	exon	19859	19952	.	+	.	ID=exon-AO053_08485-1;Parent=rna-AO053_08485;anticodon=(pos:19894..19896);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_08485;product=tRNA-Ser
GCA_005888185.1|LNKP01000101.1	Genbank	gene	19973	20049	.	+	.	ID=gene-AO053_08490;Name=AO053_08490;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_08490
GCA_005888185.1|LNKP01000101.1	tRNAscan-SE	tRNA	19973	20049	.	+	.	ID=rna-AO053_08490;Parent=gene-AO053_08490;anticodon=(pos:20007..20009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_08490;product=tRNA-Arg
GCA_005888185.1|LNKP01000101.1	tRNAscan-SE	exon	19973	20049	.	+	.	ID=exon-AO053_08490-1;Parent=rna-AO053_08490;anticodon=(pos:20007..20009);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_08490;product=tRNA-Arg
GCA_005888185.1|LNKP01000101.1	Genbank	gene	20107	20183	.	+	.	ID=gene-AO053_08495;Name=AO053_08495;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_08495
GCA_005888185.1|LNKP01000101.1	tRNAscan-SE	tRNA	20107	20183	.	+	.	ID=rna-AO053_08495;Parent=gene-AO053_08495;anticodon=(pos:20141..20143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_08495;product=tRNA-Arg
GCA_005888185.1|LNKP01000101.1	tRNAscan-SE	exon	20107	20183	.	+	.	ID=exon-AO053_08495-1;Parent=rna-AO053_08495;anticodon=(pos:20141..20143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_08495;product=tRNA-Arg
GCA_005888185.1|LNKP01000101.1	Genbank	gene	20279	20590	.	+	.	ID=gene-AO053_08500;Name=AO053_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08500
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	20279	20590	.	+	0	ID=cds-TMQ36889.1;Parent=gene-AO053_08500;Dbxref=NCBI_GP:TMQ36889.1;Name=TMQ36889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526339.1;locus_tag=AO053_08500;product=hypothetical protein;protein_id=TMQ36889.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	20630	22000	.	-	.	ID=gene-AO053_08505;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AO053_08505
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	20630	22000	.	-	0	ID=cds-TMQ36890.1;Parent=gene-AO053_08505;Dbxref=NCBI_GP:TMQ36890.1;Name=TMQ36890.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665638.1;locus_tag=AO053_08505;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=TMQ36890.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	22162	22536	.	-	.	ID=gene-AO053_08510;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AO053_08510
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	22162	22536	.	-	0	ID=cds-TMQ36891.1;Parent=gene-AO053_08510;Dbxref=NCBI_GP:TMQ36891.1;Name=TMQ36891.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526341.1;locus_tag=AO053_08510;product=50S ribosomal protein L7/L12;protein_id=TMQ36891.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	22591	23082	.	-	.	ID=gene-AO053_08515;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AO053_08515
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	22591	23082	.	-	0	ID=cds-TMQ36892.1;Parent=gene-AO053_08515;Dbxref=NCBI_GP:TMQ36892.1;Name=TMQ36892.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694693.1;locus_tag=AO053_08515;product=50S ribosomal protein L10;protein_id=TMQ36892.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	23354	24724	.	-	.	ID=gene-AO053_08520;Name=AO053_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08520
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	23354	24724	.	-	0	ID=cds-TMQ36893.1;Parent=gene-AO053_08520;Dbxref=NCBI_GP:TMQ36893.1;Name=TMQ36893.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654504.1;locus_tag=AO053_08520;product=adenylosuccinate lyase;protein_id=TMQ36893.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	24747	25364	.	-	.	ID=gene-AO053_08525;Name=AO053_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08525
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	24747	25364	.	-	0	ID=cds-TMQ36894.1;Parent=gene-AO053_08525;Dbxref=NCBI_GP:TMQ36894.1;Name=TMQ36894.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701780.1;locus_tag=AO053_08525;product=lysogenization protein HflD;protein_id=TMQ36894.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	25493	26497	.	+	.	ID=gene-AO053_08530;Name=AO053_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08530
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	25493	26497	.	+	0	ID=cds-TMQ36895.1;Parent=gene-AO053_08530;Dbxref=NCBI_GP:TMQ36895.1;Name=TMQ36895.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632272.1;locus_tag=AO053_08530;product=tryptophan--tRNA ligase;protein_id=TMQ36895.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	26519	26809	.	+	.	ID=gene-AO053_08535;Name=AO053_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08535
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	26519	26809	.	+	0	ID=cds-TMQ36896.1;Parent=gene-AO053_08535;Dbxref=NCBI_GP:TMQ36896.1;Name=TMQ36896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44027.1;locus_tag=AO053_08535;product=hypothetical protein;protein_id=TMQ36896.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	26857	27840	.	-	.	ID=gene-AO053_08540;Name=AO053_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08540
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	26857	27840	.	-	0	ID=cds-TMQ36897.1;Parent=gene-AO053_08540;Dbxref=NCBI_GP:TMQ36897.1;Name=TMQ36897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688122.1;locus_tag=AO053_08540;product=tRNA-dihydrouridine synthase A;protein_id=TMQ36897.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	27843	28091	.	-	.	ID=gene-AO053_08545;Name=AO053_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08545
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	27843	28091	.	-	0	ID=cds-TMQ36898.1;Parent=gene-AO053_08545;Dbxref=NCBI_GP:TMQ36898.1;Name=TMQ36898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690094.1;locus_tag=AO053_08545;product=hypothetical protein;protein_id=TMQ36898.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	gene	28016	28294	.	-	.	ID=gene-AO053_08550;Name=AO053_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08550
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	28016	28294	.	-	0	ID=cds-TMQ36899.1;Parent=gene-AO053_08550;Dbxref=NCBI_GP:TMQ36899.1;Name=TMQ36899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693041.1;locus_tag=AO053_08550;product=chloride channel protein;protein_id=TMQ36899.1;transl_table=11
GCA_005888185.1|LNKP01000101.1	Genbank	pseudogene	28777	29036	.	-	.	ID=gene-AO053_08555;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO053_08555;pseudo=true
GCA_005888185.1|LNKP01000101.1	Protein Homology	CDS	28777	29036	.	-	2	ID=cds-AO053_08555;Parent=gene-AO053_08555;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759586.1;locus_tag=AO053_08555;pseudo=true;transl_table=11
##sequence-region LNKP01000102.1 1 32498
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000102.1	Genbank	region	1	32498	.	+	.	ID=LNKP01000102.1:1..32498;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000102.1	Genbank	gene	130	1593	.	-	.	ID=gene-AO053_08560;Name=AO053_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08560
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	130	1593	.	-	0	ID=cds-TMQ36816.1;Parent=gene-AO053_08560;Dbxref=NCBI_GP:TMQ36816.1;Name=TMQ36816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667715.1;locus_tag=AO053_08560;product=potassium transporter;protein_id=TMQ36816.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	1596	2216	.	-	.	ID=gene-AO053_08565;Name=AO053_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08565
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	1596	2216	.	-	0	ID=cds-TMQ36817.1;Parent=gene-AO053_08565;Dbxref=NCBI_GP:TMQ36817.1;Name=TMQ36817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687845.1;locus_tag=AO053_08565;product=IMPACT family protein;protein_id=TMQ36817.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	2332	2571	.	+	.	ID=gene-AO053_08570;Name=AO053_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08570
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	2332	2571	.	+	0	ID=cds-TMQ36818.1;Parent=gene-AO053_08570;Dbxref=NCBI_GP:TMQ36818.1;Name=TMQ36818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648599.1;locus_tag=AO053_08570;product=sulfurtransferase;protein_id=TMQ36818.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	2613	3464	.	-	.	ID=gene-AO053_08575;Name=AO053_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08575
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	2613	3464	.	-	0	ID=cds-TMQ36819.1;Parent=gene-AO053_08575;Dbxref=NCBI_GP:TMQ36819.1;Name=TMQ36819.1;Note=metalloprotease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527380.1;locus_tag=AO053_08575;product=heat-shock protein HtpX;protein_id=TMQ36819.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Protein Homology	pseudogene	3813	4960	.	+	.	ID=gene-AO053_08580;Name=AO053_08580;Note=disrupted;description=DNA methyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08580;pseudo=true
GCA_005888185.1|LNKP01000102.1	Genbank	gene	5008	6171	.	+	.	ID=gene-AO053_08585;Name=AO053_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08585
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	5008	6171	.	+	0	ID=cds-TMQ36839.1;Parent=gene-AO053_08585;Dbxref=NCBI_GP:TMQ36839.1;Name=TMQ36839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500453.1;locus_tag=AO053_08585;product=HNH endonuclease;protein_id=TMQ36839.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	6240	6629	.	-	.	ID=gene-AO053_08590;Name=AO053_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08590
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	6240	6629	.	-	0	ID=cds-TMQ36820.1;Parent=gene-AO053_08590;Dbxref=NCBI_GP:TMQ36820.1;Name=TMQ36820.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665559.1;locus_tag=AO053_08590;product=reactive intermediate/imine deaminase;protein_id=TMQ36820.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	6686	7438	.	-	.	ID=gene-AO053_08595;Name=AO053_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08595
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	6686	7438	.	-	0	ID=cds-TMQ36821.1;Parent=gene-AO053_08595;Dbxref=NCBI_GP:TMQ36821.1;Name=TMQ36821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693034.1;locus_tag=AO053_08595;product=hypothetical protein;protein_id=TMQ36821.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	7589	8146	.	-	.	ID=gene-AO053_08600;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AO053_08600
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	7589	8146	.	-	0	ID=cds-TMQ36822.1;Parent=gene-AO053_08600;Dbxref=NCBI_GP:TMQ36822.1;Name=TMQ36822.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500266.1;locus_tag=AO053_08600;product=transcription antiterminator NusG;protein_id=TMQ36822.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	8148	8564	.	-	.	ID=gene-AO053_08605;Name=AO053_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08605
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	8148	8564	.	-	0	ID=cds-TMQ36823.1;Parent=gene-AO053_08605;Dbxref=NCBI_GP:TMQ36823.1;Name=TMQ36823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551093.1;locus_tag=AO053_08605;product=preprotein translocase subunit SecE;protein_id=TMQ36823.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	8708	9943	.	-	.	ID=gene-AO053_08610;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AO053_08610
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	8708	9943	.	-	0	ID=cds-TMQ36824.1;Parent=gene-AO053_08610;Dbxref=NCBI_GP:TMQ36824.1;Name=TMQ36824.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:SwissProt:P44838.1;locus_tag=AO053_08610;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=TMQ36824.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	9953	10534	.	-	.	ID=gene-AO053_08615;Name=AO053_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08615
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	9953	10534	.	-	0	ID=cds-TMQ36825.1;Parent=gene-AO053_08615;Dbxref=NCBI_GP:TMQ36825.1;Name=TMQ36825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE11.1;locus_tag=AO053_08615;product=ATP-dependent Clp protease proteolytic subunit;protein_id=TMQ36825.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	10657	11955	.	-	.	ID=gene-AO053_08620;Name=AO053_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08620
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	10657	11955	.	-	0	ID=cds-TMQ36826.1;Parent=gene-AO053_08620;Dbxref=NCBI_GP:TMQ36826.1;Name=TMQ36826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694636.1;locus_tag=AO053_08620;product=trigger factor;protein_id=TMQ36826.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Protein Homology	pseudogene	12257	15425	.	+	.	ID=gene-AO053_08625;Name=AO053_08625;Note=disrupted;description=TonB-dependent receptor;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08625;pseudo=true
GCA_005888185.1|LNKP01000102.1	Genbank	gene	15658	16746	.	+	.	ID=gene-AO053_08630;Name=AO053_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08630
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	15658	16746	.	+	0	ID=cds-TMQ36827.1;Parent=gene-AO053_08630;Dbxref=NCBI_GP:TMQ36827.1;Name=TMQ36827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527383.1;locus_tag=AO053_08630;product=selenocysteine synthase;protein_id=TMQ36827.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	17139	19724	.	-	.	ID=gene-AO053_08635;Name=AO053_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08635
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	17139	19724	.	-	0	ID=cds-TMQ36828.1;Parent=gene-AO053_08635;Dbxref=NCBI_GP:TMQ36828.1;Name=TMQ36828.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE20.1;locus_tag=AO053_08635;product=DNA mismatch repair protein MutS;protein_id=TMQ36828.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	19859	21061	.	-	.	ID=gene-AO053_08640;Name=AO053_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08640
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	19859	21061	.	-	0	ID=cds-TMQ36829.1;Parent=gene-AO053_08640;Dbxref=NCBI_GP:TMQ36829.1;Name=TMQ36829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526359.1;locus_tag=AO053_08640;product=hypothetical protein;protein_id=TMQ36829.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	21085	21270	.	-	.	ID=gene-AO053_08645;Name=AO053_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08645
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	21085	21270	.	-	0	ID=cds-TMQ36830.1;Parent=gene-AO053_08645;Dbxref=NCBI_GP:TMQ36830.1;Name=TMQ36830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44040.1;locus_tag=AO053_08645;product=hypothetical protein;protein_id=TMQ36830.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	21279	21857	.	-	.	ID=gene-AO053_08650;Name=AO053_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08650
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	21279	21857	.	-	0	ID=cds-TMQ36831.1;Parent=gene-AO053_08650;Dbxref=NCBI_GP:TMQ36831.1;Name=TMQ36831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526360.1;locus_tag=AO053_08650;product=hypothetical protein;protein_id=TMQ36831.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	21866	22615	.	-	.	ID=gene-AO053_08655;Name=AO053_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08655
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	21866	22615	.	-	0	ID=cds-TMQ36832.1;Parent=gene-AO053_08655;Dbxref=NCBI_GP:TMQ36832.1;Name=TMQ36832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45681.1;locus_tag=AO053_08655;product=stationary phase survival protein SurE;protein_id=TMQ36832.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	22625	23644	.	-	.	ID=gene-AO053_08660;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=AO053_08660
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	22625	23644	.	-	0	ID=cds-TMQ36833.1;Parent=gene-AO053_08660;Dbxref=NCBI_GP:TMQ36833.1;Name=TMQ36833.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551102.1;locus_tag=AO053_08660;product=tRNA pseudouridine synthase D;protein_id=TMQ36833.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	23753	24175	.	+	.	ID=gene-AO053_08665;Name=AO053_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08665
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	23753	24175	.	+	0	ID=cds-TMQ36834.1;Parent=gene-AO053_08665;Dbxref=NCBI_GP:TMQ36834.1;Name=TMQ36834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526363.1;locus_tag=AO053_08665;product=RNase E inhibitor protein;protein_id=TMQ36834.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	24238	27138	.	-	.	ID=gene-AO053_08670;Name=AO053_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08670
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	24238	27138	.	-	0	ID=cds-TMQ36835.1;Parent=gene-AO053_08670;Dbxref=NCBI_GP:TMQ36835.1;Name=TMQ36835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654311.1;locus_tag=AO053_08670;product=restriction endonuclease subunit R;protein_id=TMQ36835.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	27140	29020	.	-	.	ID=gene-AO053_08675;Name=AO053_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08675
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	27140	29020	.	-	0	ID=cds-TMQ36836.1;Parent=gene-AO053_08675;Dbxref=NCBI_GP:TMQ36836.1;Name=TMQ36836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526365.1;locus_tag=AO053_08675;product=type III restriction endonuclease subunit M;protein_id=TMQ36836.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	29250	29810	.	+	.	ID=gene-AO053_08680;Name=AO053_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08680
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	29250	29810	.	+	0	ID=cds-TMQ36837.1;Parent=gene-AO053_08680;Dbxref=NCBI_GP:TMQ36837.1;Name=TMQ36837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701809.1;locus_tag=AO053_08680;product=peptidylprolyl isomerase;protein_id=TMQ36837.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	gene	29962	31698	.	+	.	ID=gene-AO053_08685;Name=AO053_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08685
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	29962	31698	.	+	0	ID=cds-TMQ36838.1;Parent=gene-AO053_08685;Dbxref=NCBI_GP:TMQ36838.1;Name=TMQ36838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654307.1;locus_tag=AO053_08685;product=hypothetical protein;protein_id=TMQ36838.1;transl_table=11
GCA_005888185.1|LNKP01000102.1	Genbank	pseudogene	31708	32498	.	+	.	ID=gene-AO053_08690;Name=AO053_08690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08690;pseudo=true
GCA_005888185.1|LNKP01000102.1	Protein Homology	CDS	31708	32498	.	+	0	ID=cds-AO053_08690;Parent=gene-AO053_08690;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692371.1;locus_tag=AO053_08690;pseudo=true;transl_table=11
##sequence-region LNKP01000103.1 1 8765
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000103.1	Genbank	region	1	8765	.	+	.	ID=LNKP01000103.1:1..8765;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000103.1	Genbank	gene	1	3104	.	+	.	ID=gene-AO053_08695;Name=AO053_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08695;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000103.1	Protein Homology	CDS	1	3104	.	+	2	ID=cds-TMQ36784.1;Parent=gene-AO053_08695;Dbxref=NCBI_GP:TMQ36784.1;Name=TMQ36784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671904.1;locus_tag=AO053_08695;partial=true;product=tubulin-binding protein;protein_id=TMQ36784.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000103.1	Protein Homology	pseudogene	3112	4082	.	+	.	ID=gene-AO053_08700;Name=AO053_08700;Note=disrupted;description=exopolyphosphatase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08700;pseudo=true
GCA_005888185.1|LNKP01000103.1	Genbank	gene	4208	4891	.	-	.	ID=gene-AO053_08705;Name=AO053_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08705
GCA_005888185.1|LNKP01000103.1	Protein Homology	CDS	4208	4891	.	-	0	ID=cds-TMQ36785.1;Parent=gene-AO053_08705;Dbxref=NCBI_GP:TMQ36785.1;Name=TMQ36785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638453.1;locus_tag=AO053_08705;product=pseudouridine synthase;protein_id=TMQ36785.1;transl_table=11
GCA_005888185.1|LNKP01000103.1	Genbank	gene	5069	5893	.	-	.	ID=gene-AO053_08710;Name=AO053_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08710
GCA_005888185.1|LNKP01000103.1	Protein Homology	CDS	5069	5893	.	-	0	ID=cds-TMQ36786.1;Parent=gene-AO053_08710;Dbxref=NCBI_GP:TMQ36786.1;Name=TMQ36786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701804.1;locus_tag=AO053_08710;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=TMQ36786.1;transl_table=11
GCA_005888185.1|LNKP01000103.1	Genbank	gene	6018	7112	.	-	.	ID=gene-AO053_08715;Name=AO053_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08715
GCA_005888185.1|LNKP01000103.1	Protein Homology	CDS	6018	7112	.	-	0	ID=cds-TMQ36787.1;Parent=gene-AO053_08715;Dbxref=NCBI_GP:TMQ36787.1;Name=TMQ36787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655022.1;locus_tag=AO053_08715;product=glycerophosphoryl diester phosphodiesterase;protein_id=TMQ36787.1;transl_table=11
GCA_005888185.1|LNKP01000103.1	Genbank	gene	7216	8658	.	-	.	ID=gene-AO053_08720;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=AO053_08720
GCA_005888185.1|LNKP01000103.1	Protein Homology	CDS	7216	8658	.	-	0	ID=cds-TMQ36788.1;Parent=gene-AO053_08720;Dbxref=NCBI_GP:TMQ36788.1;Name=TMQ36788.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064617.1;locus_tag=AO053_08720;product=glycerol-3-phosphate transporter;protein_id=TMQ36788.1;transl_table=11
##sequence-region LNKP01000104.1 1 23453
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000104.1	Genbank	region	1	23453	.	+	.	ID=LNKP01000104.1:1..23453;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000104.1	Genbank	gene	187	1878	.	+	.	ID=gene-AO053_08725;Name=AO053_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08725
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	187	1878	.	+	0	ID=cds-TMQ36729.1;Parent=gene-AO053_08725;Dbxref=NCBI_GP:TMQ36729.1;Name=TMQ36729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655019.1;locus_tag=AO053_08725;product=glycerol-3-phosphate dehydrogenase%2C anaerobic%2C A subunit;protein_id=TMQ36729.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	1868	3166	.	+	.	ID=gene-AO053_08730;Name=AO053_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08730
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	1868	3166	.	+	0	ID=cds-TMQ36730.1;Parent=gene-AO053_08730;Dbxref=NCBI_GP:TMQ36730.1;Name=TMQ36730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE48.1;locus_tag=AO053_08730;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=TMQ36730.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	3178	4458	.	+	.	ID=gene-AO053_08735;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=AO053_08735
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	3178	4458	.	+	0	ID=cds-TMQ36731.1;Parent=gene-AO053_08735;Dbxref=NCBI_GP:TMQ36731.1;Name=TMQ36731.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658423.1;locus_tag=AO053_08735;product=glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit;protein_id=TMQ36731.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	4569	6047	.	-	.	ID=gene-AO053_08740;Name=AO053_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08740
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	4569	6047	.	-	0	ID=cds-TMQ36732.1;Parent=gene-AO053_08740;Dbxref=NCBI_GP:TMQ36732.1;Name=TMQ36732.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661223.1;locus_tag=AO053_08740;product=ketol-acid reductoisomerase;protein_id=TMQ36732.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	6725	7603	.	+	.	ID=gene-AO053_08745;Name=AO053_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08745
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	6725	7603	.	+	0	ID=cds-TMQ36733.1;Parent=gene-AO053_08745;Dbxref=NCBI_GP:TMQ36733.1;Name=TMQ36733.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272165.1;locus_tag=AO053_08745;product=transcriptional regulator;protein_id=TMQ36733.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	7635	8513	.	+	.	ID=gene-AO053_08750;Name=AO053_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08750
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	7635	8513	.	+	0	ID=cds-TMQ36734.1;Parent=gene-AO053_08750;Dbxref=NCBI_GP:TMQ36734.1;Name=TMQ36734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57389.1;locus_tag=AO053_08750;product=permease;protein_id=TMQ36734.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	8514	8831	.	+	.	ID=gene-AO053_08755;Name=AO053_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08755
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	8514	8831	.	+	0	ID=cds-TMQ36735.1;Parent=gene-AO053_08755;Dbxref=NCBI_GP:TMQ36735.1;Name=TMQ36735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526376.1;locus_tag=AO053_08755;product=thiosulfate sulfurtransferase;protein_id=TMQ36735.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	8913	9704	.	-	.	ID=gene-AO053_08760;Name=AO053_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08760
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	8913	9704	.	-	0	ID=cds-TMQ36736.1;Parent=gene-AO053_08760;Dbxref=NCBI_GP:TMQ36736.1;Name=TMQ36736.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694828.1;locus_tag=AO053_08760;product=triose-phosphate isomerase;protein_id=TMQ36736.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	9870	10310	.	+	.	ID=gene-AO053_08765;Name=AO053_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08765
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	9870	10310	.	+	0	ID=cds-TMQ36737.1;Parent=gene-AO053_08765;Dbxref=NCBI_GP:TMQ36737.1;Name=TMQ36737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44036.1;locus_tag=AO053_08765;product=hypothetical protein;protein_id=TMQ36737.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	10304	11203	.	+	.	ID=gene-AO053_08770;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=AO053_08770
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	10304	11203	.	+	0	ID=cds-TMQ36738.1;Parent=gene-AO053_08770;Dbxref=NCBI_GP:TMQ36738.1;Name=TMQ36738.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995253.1;locus_tag=AO053_08770;product=recombinase XerC;protein_id=TMQ36738.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	11244	12698	.	-	.	ID=gene-AO053_08775;Name=AO053_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08775
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	11244	12698	.	-	0	ID=cds-TMQ36739.1;Parent=gene-AO053_08775;Dbxref=NCBI_GP:TMQ36739.1;Name=TMQ36739.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527389.1;locus_tag=AO053_08775;product=aminoacyl-histidine dipeptidase;protein_id=TMQ36739.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	12809	13276	.	+	.	ID=gene-AO053_08780;Name=AO053_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08780
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	12809	13276	.	+	0	ID=cds-TMQ36740.1;Parent=gene-AO053_08780;Dbxref=NCBI_GP:TMQ36740.1;Name=TMQ36740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43859.1;locus_tag=AO053_08780;product=xanthine phosphoribosyltransferase;protein_id=TMQ36740.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	13399	13677	.	+	.	ID=gene-AO053_08785;Name=AO053_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08785
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	13399	13677	.	+	0	ID=cds-TMQ36741.1;Parent=gene-AO053_08785;Dbxref=NCBI_GP:TMQ36741.1;Name=TMQ36741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE58.1;locus_tag=AO053_08785;product=cell division protein FtsB;protein_id=TMQ36741.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	13677	14354	.	+	.	ID=gene-AO053_08790;Name=AO053_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08790
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	13677	14354	.	+	0	ID=cds-TMQ36742.1;Parent=gene-AO053_08790;Dbxref=NCBI_GP:TMQ36742.1;Name=TMQ36742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665663.1;locus_tag=AO053_08790;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=TMQ36742.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	14351	14827	.	+	.	ID=gene-AO053_08795;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AO053_08795
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	14351	14827	.	+	0	ID=cds-TMQ36743.1;Parent=gene-AO053_08795;Dbxref=NCBI_GP:TMQ36743.1;Name=TMQ36743.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44815.1;locus_tag=AO053_08795;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=TMQ36743.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	15323	15757	.	-	.	ID=gene-AO053_08800;Name=AO053_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08800
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	15323	15757	.	-	0	ID=cds-TMQ36744.1;Parent=gene-AO053_08800;Dbxref=NCBI_GP:TMQ36744.1;Name=TMQ36744.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551116.1;locus_tag=AO053_08800;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=TMQ36744.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	15754	16194	.	-	.	ID=gene-AO053_08805;Name=AO053_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08805
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	15754	16194	.	-	0	ID=cds-TMQ36745.1;Parent=gene-AO053_08805;Dbxref=NCBI_GP:TMQ36745.1;Name=TMQ36745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672751.1;locus_tag=AO053_08805;product=mioC;protein_id=TMQ36745.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	16291	16509	.	-	.	ID=gene-AO053_08810;Name=AO053_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08810
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	16291	16509	.	-	0	ID=cds-TMQ36746.1;Parent=gene-AO053_08810;Dbxref=NCBI_GP:TMQ36746.1;Name=TMQ36746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44812.1;locus_tag=AO053_08810;product=cell division protein ZapB;protein_id=TMQ36746.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	16671	17672	.	+	.	ID=gene-AO053_08815;Name=AO053_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08815
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	16671	17672	.	+	0	ID=cds-TMQ36747.1;Parent=gene-AO053_08815;Dbxref=NCBI_GP:TMQ36747.1;Name=TMQ36747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667633.1;locus_tag=AO053_08815;product=fructose 1%2C6-bisphosphatase;protein_id=TMQ36747.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	17873	18181	.	+	.	ID=gene-AO053_08820;Name=AO053_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08820
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	17873	18181	.	+	0	ID=cds-TMQ36748.1;Parent=gene-AO053_08820;Dbxref=NCBI_GP:TMQ36748.1;Name=TMQ36748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O86228.1;locus_tag=AO053_08820;product=transcriptional regulator;protein_id=TMQ36748.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	18169	18489	.	+	.	ID=gene-AO053_08825;Name=AO053_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08825
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	18169	18489	.	+	0	ID=cds-TMQ36749.1;Parent=gene-AO053_08825;Dbxref=NCBI_GP:TMQ36749.1;Name=TMQ36749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526378.1;locus_tag=AO053_08825;product=hypothetical protein;protein_id=TMQ36749.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	18486	19517	.	+	.	ID=gene-AO053_08830;Name=AO053_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08830
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	18486	19517	.	+	0	ID=cds-TMQ36750.1;Parent=gene-AO053_08830;Dbxref=NCBI_GP:TMQ36750.1;Name=TMQ36750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635269.1;locus_tag=AO053_08830;product=kinase;protein_id=TMQ36750.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	19600	21258	.	-	.	ID=gene-AO053_08835;Name=AO053_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08835
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	19600	21258	.	-	0	ID=cds-TMQ36751.1;Parent=gene-AO053_08835;Dbxref=NCBI_GP:TMQ36751.1;Name=TMQ36751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551120.1;locus_tag=AO053_08835;product=ABC transporter ATP-binding protein;protein_id=TMQ36751.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	21251	22996	.	-	.	ID=gene-AO053_08840;Name=AO053_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08840
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	21251	22996	.	-	0	ID=cds-TMQ36752.1;Parent=gene-AO053_08840;Dbxref=NCBI_GP:TMQ36752.1;Name=TMQ36752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055159.1;locus_tag=AO053_08840;product=ABC transporter ATP-binding protein;protein_id=TMQ36752.1;transl_table=11
GCA_005888185.1|LNKP01000104.1	Genbank	gene	23299	23453	.	+	.	ID=gene-AO053_08845;Name=AO053_08845;end_range=23453,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08845;partial=true
GCA_005888185.1|LNKP01000104.1	Protein Homology	CDS	23299	23453	.	+	0	ID=cds-TMQ36753.1;Parent=gene-AO053_08845;Dbxref=NCBI_GP:TMQ36753.1;Name=TMQ36753.1;end_range=23453,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661263.1;locus_tag=AO053_08845;partial=true;product=carbamate kinase;protein_id=TMQ36753.1;transl_table=11
##sequence-region LNKP01000105.1 1 1943
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000105.1	Genbank	region	1	1943	.	+	.	ID=LNKP01000105.1:1..1943;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000105.1	Genbank	gene	1	1943	.	+	.	ID=gene-AO053_08850;Name=AO053_08850;end_range=1943,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08850;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000105.1	Protein Homology	CDS	1	1943	.	+	1	ID=cds-TMQ36686.1;Parent=gene-AO053_08850;Dbxref=NCBI_GP:TMQ36686.1;Name=TMQ36686.1;end_range=1943,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526382.1;locus_tag=AO053_08850;partial=true;product=ligand-gated channel protein;protein_id=TMQ36686.1;start_range=.,1;transl_table=11
##sequence-region LNKP01000106.1 1 17060
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000106.1	Genbank	region	1	17060	.	+	.	ID=LNKP01000106.1:1..17060;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000106.1	Genbank	pseudogene	1	776	.	+	.	ID=gene-AO053_08855;Name=AO053_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08855;pseudo=true
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	1	776	.	+	2	ID=cds-AO053_08855;Parent=gene-AO053_08855;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526382.1;locus_tag=AO053_08855;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	1236	1940	.	+	.	ID=gene-AO053_08860;Name=AO053_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08860
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	1236	1940	.	+	0	ID=cds-TMQ36663.1;Parent=gene-AO053_08860;Dbxref=NCBI_GP:TMQ36663.1;Name=TMQ36663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QMU5.1;locus_tag=AO053_08860;product=peptidase E;protein_id=TMQ36663.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	1958	3253	.	+	.	ID=gene-AO053_08865;Name=AO053_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08865
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	1958	3253	.	+	0	ID=cds-TMQ36664.1;Parent=gene-AO053_08865;Dbxref=NCBI_GP:TMQ36664.1;Name=TMQ36664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627117.1;locus_tag=AO053_08865;product=C4-dicarboxylate ABC transporter;protein_id=TMQ36664.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	3376	4632	.	-	.	ID=gene-AO053_08870;Name=AO053_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08870
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	3376	4632	.	-	0	ID=cds-TMQ36665.1;Parent=gene-AO053_08870;Dbxref=NCBI_GP:TMQ36665.1;Name=TMQ36665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995238.1;locus_tag=AO053_08870;product=histidyl-tRNA synthetase;protein_id=TMQ36665.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	5050	5454	.	-	.	ID=gene-AO053_08875;Name=AO053_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08875
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	5050	5454	.	-	0	ID=cds-TMQ36666.1;Parent=gene-AO053_08875;Dbxref=NCBI_GP:TMQ36666.1;Name=TMQ36666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692799.1;locus_tag=AO053_08875;product=hypothetical protein;protein_id=TMQ36666.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	5665	6816	.	-	.	ID=gene-AO053_08880;Name=AO053_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08880
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	5665	6816	.	-	0	ID=cds-TMQ36667.1;Parent=gene-AO053_08880;Dbxref=NCBI_GP:TMQ36667.1;Name=TMQ36667.1;Note=catalyzes the formation of histamine from L-histidine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995234.1;locus_tag=AO053_08880;product=histidine decarboxylase;protein_id=TMQ36667.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	6840	8201	.	-	.	ID=gene-AO053_08885;Name=AO053_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08885
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	6840	8201	.	-	0	ID=cds-TMQ36668.1;Parent=gene-AO053_08885;Dbxref=NCBI_GP:TMQ36668.1;Name=TMQ36668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995233.1;locus_tag=AO053_08885;product=histidine-histamine antiporter;protein_id=TMQ36668.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	8703	10673	.	+	.	ID=gene-AO053_08890;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=AO053_08890
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	8703	10673	.	+	0	ID=cds-TMQ36669.1;Parent=gene-AO053_08890;Dbxref=NCBI_GP:TMQ36669.1;Name=TMQ36669.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995232.1;locus_tag=AO053_08890;product=2'%2C 3'-cyclic nucleotide 2'-phosphodiesterase;protein_id=TMQ36669.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	11360	13249	.	+	.	ID=gene-AO053_08895;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=AO053_08895
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	11360	13249	.	+	0	ID=cds-TMQ36670.1;Parent=gene-AO053_08895;Dbxref=NCBI_GP:TMQ36670.1;Name=TMQ36670.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UHB8.1;locus_tag=AO053_08895;product=tRNA uridine 5-carboxymethylaminomethyl modification protein;protein_id=TMQ36670.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	13430	13804	.	+	.	ID=gene-AO053_08900;Name=AO053_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08900
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	13430	13804	.	+	0	ID=cds-TMQ36671.1;Parent=gene-AO053_08900;Dbxref=NCBI_GP:TMQ36671.1;Name=TMQ36671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0KQ98.1;locus_tag=AO053_08900;product=30S ribosomal protein S12;protein_id=TMQ36671.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	13961	14431	.	+	.	ID=gene-AO053_08905;Name=AO053_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08905
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	13961	14431	.	+	0	ID=cds-TMQ36672.1;Parent=gene-AO053_08905;Dbxref=NCBI_GP:TMQ36672.1;Name=TMQ36672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526570.1;locus_tag=AO053_08905;product=30S ribosomal protein S7;protein_id=TMQ36672.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	gene	14515	16617	.	+	.	ID=gene-AO053_08910;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AO053_08910
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	14515	16617	.	+	0	ID=cds-TMQ36673.1;Parent=gene-AO053_08910;Dbxref=NCBI_GP:TMQ36673.1;Name=TMQ36673.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243488.1;locus_tag=AO053_08910;product=elongation factor G;protein_id=TMQ36673.1;transl_table=11
GCA_005888185.1|LNKP01000106.1	Genbank	pseudogene	16682	17060	.	+	.	ID=gene-AO053_08915;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=AO053_08915;pseudo=true
GCA_005888185.1|LNKP01000106.1	Protein Homology	CDS	16682	17060	.	+	0	ID=cds-AO053_08915;Parent=gene-AO053_08915;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578004.1;locus_tag=AO053_08915;pseudo=true;transl_table=11
##sequence-region LNKP01000107.1 1 18815
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000107.1	Genbank	region	1	18815	.	+	.	ID=LNKP01000107.1:1..18815;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000107.1	Genbank	pseudogene	1	117	.	-	.	ID=gene-AO053_08920;Name=AO053_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08920;pseudo=true
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	1	117	.	-	0	ID=cds-AO053_08920;Parent=gene-AO053_08920;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UC84.1;locus_tag=AO053_08920;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000107.1	cmsearch	sequence_feature	61	181	.	-	.	ID=id-LNKP01000107.1:61..181;Note=ribosomal protein S15 leader;gbkey=misc_feature
GCA_005888185.1|LNKP01000107.1	Genbank	gene	253	387	.	-	.	ID=gene-AO053_08925;Name=AO053_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08925
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	253	387	.	-	0	ID=cds-TMQ36595.1;Parent=gene-AO053_08925;Dbxref=NCBI_GP:TMQ36595.1;Name=TMQ36595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702209.1;locus_tag=AO053_08925;product=hypothetical protein;protein_id=TMQ36595.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	387	1115	.	-	.	ID=gene-AO053_08930;Name=AO053_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08930
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	387	1115	.	-	0	ID=cds-TMQ36596.1;Parent=gene-AO053_08930;Dbxref=NCBI_GP:TMQ36596.1;Name=TMQ36596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525851.1;locus_tag=AO053_08930;product=hypothetical protein;protein_id=TMQ36596.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	1349	1882	.	-	.	ID=gene-AO053_08935;Name=AO053_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08935
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	1349	1882	.	-	0	ID=cds-TMQ36597.1;Parent=gene-AO053_08935;Dbxref=NCBI_GP:TMQ36597.1;Name=TMQ36597.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702207.1;locus_tag=AO053_08935;product=beta-hydroxydecanoyl-ACP dehydratase;protein_id=TMQ36597.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	2051	3826	.	-	.	ID=gene-AO053_08940;Name=AO053_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08940
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	2051	3826	.	-	0	ID=cds-TMQ36598.1;Parent=gene-AO053_08940;Dbxref=NCBI_GP:TMQ36598.1;Name=TMQ36598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43865.1;locus_tag=AO053_08940;product=peptidase;protein_id=TMQ36598.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	3953	4399	.	+	.	ID=gene-AO053_08945;Name=AO053_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08945
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	3953	4399	.	+	0	ID=cds-TMQ36599.1;Parent=gene-AO053_08945;Dbxref=NCBI_GP:TMQ36599.1;Name=TMQ36599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44161.1;locus_tag=AO053_08945;product=Ter macrodomain organizer matS-binding protein;protein_id=TMQ36599.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	4468	6390	.	-	.	ID=gene-AO053_08950;Name=AO053_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08950
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	4468	6390	.	-	0	ID=cds-TMQ36600.1;Parent=gene-AO053_08950;Dbxref=NCBI_GP:TMQ36600.1;Name=TMQ36600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525853.1;locus_tag=AO053_08950;product=exodeoxyribonuclease V subunit alpha;protein_id=TMQ36600.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	6390	9995	.	-	.	ID=gene-AO053_08955;Name=AO053_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08955
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	6390	9995	.	-	0	ID=cds-TMQ36601.1;Parent=gene-AO053_08955;Dbxref=NCBI_GP:TMQ36601.1;Name=TMQ36601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525854.1;locus_tag=AO053_08955;product=exodeoxyribonuclease V subunit beta;protein_id=TMQ36601.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	10108	10461	.	-	.	ID=gene-AO053_08960;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AO053_08960
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	10108	10461	.	-	0	ID=cds-TMQ36602.1;Parent=gene-AO053_08960;Dbxref=NCBI_GP:TMQ36602.1;Name=TMQ36602.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745267.1;locus_tag=AO053_08960;product=50S ribosomal protein L20;protein_id=TMQ36602.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	10527	10724	.	-	.	ID=gene-AO053_08965;Name=AO053_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08965
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	10527	10724	.	-	0	ID=cds-TMQ36609.1;Parent=gene-AO053_08965;Dbxref=NCBI_GP:TMQ36609.1;Name=TMQ36609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006249241.1;locus_tag=AO053_08965;product=50S ribosomal protein L35;protein_id=TMQ36609.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	10935	11420	.	-	.	ID=gene-AO053_08970;Name=AO053_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08970
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	10935	11420	.	-	0	ID=cds-TMQ36603.1;Parent=gene-AO053_08970;Dbxref=NCBI_GP:TMQ36603.1;Name=TMQ36603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005546414.1;locus_tag=AO053_08970;product=translation initiation factor IF-3;protein_id=TMQ36603.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	11610	12422	.	-	.	ID=gene-AO053_08975;Name=AO053_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08975
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	11610	12422	.	-	0	ID=cds-TMQ36604.1;Parent=gene-AO053_08975;Dbxref=NCBI_GP:TMQ36604.1;Name=TMQ36604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657392.1;locus_tag=AO053_08975;product=D-hexose-6-phosphate mutarotase;protein_id=TMQ36604.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	12507	12944	.	-	.	ID=gene-AO053_08980;Name=AO053_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08980
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	12507	12944	.	-	0	ID=cds-TMQ36610.1;Parent=gene-AO053_08980;Dbxref=NCBI_GP:TMQ36610.1;Name=TMQ36610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702202.1;locus_tag=AO053_08980;product=arylsulfatase;protein_id=TMQ36610.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	pseudogene	13098	13688	.	-	.	ID=gene-AO053_08985;Name=AO053_08985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08985;pseudo=true
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	13098	13688	.	-	0	ID=cds-AO053_08985;Parent=gene-AO053_08985;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525856.1;locus_tag=AO053_08985;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000107.1	Protein Homology	pseudogene	14040	14345	.	-	.	ID=gene-AO053_08990;Name=AO053_08990;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_08990;pseudo=true
GCA_005888185.1|LNKP01000107.1	Genbank	gene	14510	14995	.	-	.	ID=gene-AO053_08995;Name=AO053_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_08995
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	14510	14995	.	-	0	ID=cds-TMQ36605.1;Parent=gene-AO053_08995;Dbxref=NCBI_GP:TMQ36605.1;Name=TMQ36605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637838.1;locus_tag=AO053_08995;product=endopeptidase;protein_id=TMQ36605.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	15048	15338	.	-	.	ID=gene-AO053_09000;Name=AO053_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09000
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	15048	15338	.	-	0	ID=cds-TMQ36606.1;Parent=gene-AO053_09000;Dbxref=NCBI_GP:TMQ36606.1;Name=TMQ36606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43723.1;locus_tag=AO053_09000;product=integration host factor subunit alpha;protein_id=TMQ36606.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	15340	17727	.	-	.	ID=gene-AO053_09005;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AO053_09005
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	15340	17727	.	-	0	ID=cds-TMQ36607.1;Parent=gene-AO053_09005;Dbxref=NCBI_GP:TMQ36607.1;Name=TMQ36607.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525857.1;locus_tag=AO053_09005;product=phenylalanine--tRNA ligase subunit beta;protein_id=TMQ36607.1;transl_table=11
GCA_005888185.1|LNKP01000107.1	Genbank	gene	17761	18750	.	-	.	ID=gene-AO053_09010;Name=AO053_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09010
GCA_005888185.1|LNKP01000107.1	Protein Homology	CDS	17761	18750	.	-	0	ID=cds-TMQ36608.1;Parent=gene-AO053_09010;Dbxref=NCBI_GP:TMQ36608.1;Name=TMQ36608.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650357.1;locus_tag=AO053_09010;product=phenylalanine--tRNA ligase subunit alpha;protein_id=TMQ36608.1;transl_table=11
##sequence-region LNKP01000108.1 1 1982
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000108.1	Genbank	region	1	1982	.	+	.	ID=LNKP01000108.1:1..1982;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000108.1	Genbank	gene	81	821	.	-	.	ID=gene-AO053_09015;Name=AO053_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09015
GCA_005888185.1|LNKP01000108.1	Protein Homology	CDS	81	821	.	-	0	ID=cds-TMQ36592.1;Parent=gene-AO053_09015;Dbxref=NCBI_GP:TMQ36592.1;Name=TMQ36592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702190.1;locus_tag=AO053_09015;product=hypothetical protein;protein_id=TMQ36592.1;transl_table=11
GCA_005888185.1|LNKP01000108.1	Genbank	gene	867	1115	.	+	.	ID=gene-AO053_09020;Name=AO053_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09020
GCA_005888185.1|LNKP01000108.1	Protein Homology	CDS	867	1115	.	+	0	ID=cds-TMQ36593.1;Parent=gene-AO053_09020;Dbxref=NCBI_GP:TMQ36593.1;Name=TMQ36593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45154.1;locus_tag=AO053_09020;product=(2Fe-2S)-binding protein;protein_id=TMQ36593.1;transl_table=11
GCA_005888185.1|LNKP01000108.1	Genbank	gene	1110	1922	.	-	.	ID=gene-AO053_09025;Name=AO053_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09025
GCA_005888185.1|LNKP01000108.1	Protein Homology	CDS	1110	1922	.	-	0	ID=cds-TMQ36594.1;Parent=gene-AO053_09025;Dbxref=NCBI_GP:TMQ36594.1;Name=TMQ36594.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696006.1;locus_tag=AO053_09025;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=TMQ36594.1;transl_table=11
##sequence-region LNKP01000109.1 1 8136
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000109.1	Genbank	region	1	8136	.	+	.	ID=LNKP01000109.1:1..8136;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000109.1	Genbank	gene	1	584	.	-	.	ID=gene-AO053_09030;Name=AO053_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09030;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	1	584	.	-	0	ID=cds-TMQ36542.1;Parent=gene-AO053_09030;Dbxref=NCBI_GP:TMQ36542.1;Name=TMQ36542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57320.1;locus_tag=AO053_09030;partial=true;product=hypothetical protein;protein_id=TMQ36542.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	gene	584	1075	.	-	.	ID=gene-AO053_09035;Name=AO053_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09035
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	584	1075	.	-	0	ID=cds-TMQ36543.1;Parent=gene-AO053_09035;Dbxref=NCBI_GP:TMQ36543.1;Name=TMQ36543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44157.1;locus_tag=AO053_09035;product=phosphatidylglycerophosphatase;protein_id=TMQ36543.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	gene	1072	2058	.	-	.	ID=gene-AO053_09040;Name=AO053_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09040
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	1072	2058	.	-	0	ID=cds-TMQ36544.1;Parent=gene-AO053_09040;Dbxref=NCBI_GP:TMQ36544.1;Name=TMQ36544.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652864.1;locus_tag=AO053_09040;product=thiamine monophosphate kinase;protein_id=TMQ36544.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	gene	2125	2559	.	-	.	ID=gene-AO053_09045;Name=AO053_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09045
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	2125	2559	.	-	0	ID=cds-TMQ36545.1;Parent=gene-AO053_09045;Dbxref=NCBI_GP:TMQ36545.1;Name=TMQ36545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702186.1;locus_tag=AO053_09045;product=N utilization substance protein B;protein_id=TMQ36545.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	gene	2563	3036	.	-	.	ID=gene-AO053_09050;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AO053_09050
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	2563	3036	.	-	0	ID=cds-TMQ36546.1;Parent=gene-AO053_09050;Dbxref=NCBI_GP:TMQ36546.1;Name=TMQ36546.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKN2.1;locus_tag=AO053_09050;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=TMQ36546.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	gene	3263	4666	.	+	.	ID=gene-AO053_09055;Name=AO053_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09055
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	3263	4666	.	+	0	ID=cds-TMQ36547.1;Parent=gene-AO053_09055;Dbxref=NCBI_GP:TMQ36547.1;Name=TMQ36547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995950.1;locus_tag=AO053_09055;product=asparaginyl- tRNA synthetase;protein_id=TMQ36547.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	gene	4742	5431	.	+	.	ID=gene-AO053_09060;Name=AO053_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09060
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	4742	5431	.	+	0	ID=cds-TMQ36548.1;Parent=gene-AO053_09060;Dbxref=NCBI_GP:TMQ36548.1;Name=TMQ36548.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45148.1;locus_tag=AO053_09060;product=carbonic anhydrase;protein_id=TMQ36548.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Protein Homology	pseudogene	6537	7159	.	+	.	ID=gene-AO053_09065;Name=AO053_09065;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09065;pseudo=true
GCA_005888185.1|LNKP01000109.1	Genbank	gene	7089	7544	.	+	.	ID=gene-AO053_09070;Name=AO053_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09070
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	7089	7544	.	+	0	ID=cds-TMQ36549.1;Parent=gene-AO053_09070;Dbxref=NCBI_GP:TMQ36549.1;Name=TMQ36549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996073.1;locus_tag=AO053_09070;product=hemin receptor;protein_id=TMQ36549.1;transl_table=11
GCA_005888185.1|LNKP01000109.1	Genbank	pseudogene	7719	8136	.	+	.	ID=gene-AO053_09075;Name=AO053_09075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09075;pseudo=true
GCA_005888185.1|LNKP01000109.1	Protein Homology	CDS	7719	8136	.	+	0	ID=cds-AO053_09075;Parent=gene-AO053_09075;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996074.1;locus_tag=AO053_09075;pseudo=true;transl_table=11
##sequence-region LNKP01000110.1 1 2384
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000110.1	Genbank	region	1	2384	.	+	.	ID=LNKP01000110.1:1..2384;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000110.1	Genbank	pseudogene	1	289	.	+	.	ID=gene-AO053_09080;Name=AO053_09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09080;pseudo=true
GCA_005888185.1|LNKP01000110.1	Protein Homology	CDS	1	289	.	+	1	ID=cds-AO053_09080;Parent=gene-AO053_09080;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996074.1;locus_tag=AO053_09080;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000110.1	Genbank	gene	636	953	.	+	.	ID=gene-AO053_09085;Name=AO053_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09085
GCA_005888185.1|LNKP01000110.1	Protein Homology	CDS	636	953	.	+	0	ID=cds-TMQ36541.1;Parent=gene-AO053_09085;Dbxref=NCBI_GP:TMQ36541.1;Name=TMQ36541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996076.1;locus_tag=AO053_09085;product=hemocin immunity protein;protein_id=TMQ36541.1;transl_table=11
GCA_005888185.1|LNKP01000110.1	Genbank	gene	1316	1900	.	-	.	ID=gene-AO053_09090;Name=AO053_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09090
GCA_005888185.1|LNKP01000110.1	Protein Homology	CDS	1316	1900	.	-	0	ID=cds-TMQ36539.1;Parent=gene-AO053_09090;Dbxref=NCBI_GP:TMQ36539.1;Name=TMQ36539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45167.1;locus_tag=AO053_09090;product=hypothetical protein;protein_id=TMQ36539.1;transl_table=11
GCA_005888185.1|LNKP01000110.1	Genbank	gene	1873	2277	.	-	.	ID=gene-AO053_09095;Name=AO053_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09095
GCA_005888185.1|LNKP01000110.1	Protein Homology	CDS	1873	2277	.	-	0	ID=cds-TMQ36540.1;Parent=gene-AO053_09095;Dbxref=NCBI_GP:TMQ36540.1;Name=TMQ36540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688158.1;locus_tag=AO053_09095;product=ABC transporter;protein_id=TMQ36540.1;transl_table=11
##sequence-region LNKP01000111.1 1 55245
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000111.1	Genbank	region	1	55245	.	+	.	ID=LNKP01000111.1:1..55245;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000111.1	Genbank	gene	495	989	.	+	.	ID=gene-AO053_09100;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AO053_09100
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	495	989	.	+	0	ID=cds-TMQ36427.1;Parent=gene-AO053_09100;Dbxref=NCBI_GP:TMQ36427.1;Name=TMQ36427.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525981.1;locus_tag=AO053_09100;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=TMQ36427.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	1059	2147	.	+	.	ID=gene-AO053_09105;Name=AO053_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09105
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	1059	2147	.	+	0	ID=cds-TMQ36428.1;Parent=gene-AO053_09105;Dbxref=NCBI_GP:TMQ36428.1;Name=TMQ36428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527770.1;locus_tag=AO053_09105;product=phosphoribosylaminoimidazole carboxylase;protein_id=TMQ36428.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	2286	3476	.	+	.	ID=gene-AO053_09110;Name=AO053_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09110
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	2286	3476	.	+	0	ID=cds-TMQ36429.1;Parent=gene-AO053_09110;Dbxref=NCBI_GP:TMQ36429.1;Name=TMQ36429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499893.1;locus_tag=AO053_09110;product=aromatic amino acid aminotransferase;protein_id=TMQ36429.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	3635	4252	.	-	.	ID=gene-AO053_09115;Name=AO053_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09115
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	3635	4252	.	-	0	ID=cds-TMQ36430.1;Parent=gene-AO053_09115;Dbxref=NCBI_GP:TMQ36430.1;Name=TMQ36430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632426.1;locus_tag=AO053_09115;product=cobalt ABC transporter ATP-binding protein;protein_id=TMQ36430.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	4254	4886	.	-	.	ID=gene-AO053_09120;Name=AO053_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09120
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	4254	4886	.	-	0	ID=cds-TMQ36431.1;Parent=gene-AO053_09120;Dbxref=NCBI_GP:TMQ36431.1;Name=TMQ36431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702436.1;locus_tag=AO053_09120;product=ABC transporter permease;protein_id=TMQ36431.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	4886	5506	.	-	.	ID=gene-AO053_09125;Name=AO053_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09125
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	4886	5506	.	-	0	ID=cds-TMQ36432.1;Parent=gene-AO053_09125;Dbxref=NCBI_GP:TMQ36432.1;Name=TMQ36432.1;Note=catalyzes the ATP-dependent transport of cobalt;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525986.1;locus_tag=AO053_09125;product=cobalamin biosynthesis protein CbiM;protein_id=TMQ36432.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	5506	5991	.	-	.	ID=gene-AO053_09130;Name=AO053_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09130
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	5506	5991	.	-	0	ID=cds-TMQ36433.1;Parent=gene-AO053_09130;Dbxref=NCBI_GP:TMQ36433.1;Name=TMQ36433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638020.1;locus_tag=AO053_09130;product=hypothetical protein;protein_id=TMQ36433.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	6004	6687	.	-	.	ID=gene-AO053_09135;Name=AO053_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09135
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	6004	6687	.	-	0	ID=cds-TMQ36434.1;Parent=gene-AO053_09135;Dbxref=NCBI_GP:TMQ36434.1;Name=TMQ36434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629048.1;locus_tag=AO053_09135;product=hypothetical protein;protein_id=TMQ36434.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	6777	7184	.	+	.	ID=gene-AO053_09140;Name=AO053_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09140
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	6777	7184	.	+	0	ID=cds-TMQ36435.1;Parent=gene-AO053_09140;Dbxref=NCBI_GP:TMQ36435.1;Name=TMQ36435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629049.1;locus_tag=AO053_09140;product=MerR family transcriptional regulator;protein_id=TMQ36435.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	7199	7741	.	-	.	ID=gene-AO053_09145;Name=AO053_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09145
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	7199	7741	.	-	0	ID=cds-TMQ36436.1;Parent=gene-AO053_09145;Dbxref=NCBI_GP:TMQ36436.1;Name=TMQ36436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667296.1;locus_tag=AO053_09145;product=hypothetical protein;protein_id=TMQ36436.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	7742	8458	.	-	.	ID=gene-AO053_09150;Name=AO053_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09150
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	7742	8458	.	-	0	ID=cds-TMQ36437.1;Parent=gene-AO053_09150;Dbxref=NCBI_GP:TMQ36437.1;Name=TMQ36437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525991.1;locus_tag=AO053_09150;product=hypothetical protein;protein_id=TMQ36437.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	8570	8920	.	+	.	ID=gene-AO053_09155;Name=AO053_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09155
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	8570	8920	.	+	0	ID=cds-TMQ36438.1;Parent=gene-AO053_09155;Dbxref=NCBI_GP:TMQ36438.1;Name=TMQ36438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996461.1;locus_tag=AO053_09155;product=aminoacrylate peracid reductase;protein_id=TMQ36438.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	8951	9355	.	+	.	ID=gene-AO053_09160;Name=AO053_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09160
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	8951	9355	.	+	0	ID=cds-TMQ36439.1;Parent=gene-AO053_09160;Dbxref=NCBI_GP:TMQ36439.1;Name=TMQ36439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638031.1;locus_tag=AO053_09160;product=hypothetical protein;protein_id=TMQ36439.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	9402	10007	.	-	.	ID=gene-AO053_09165;Name=AO053_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09165
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	9402	10007	.	-	0	ID=cds-TMQ36440.1;Parent=gene-AO053_09165;Dbxref=NCBI_GP:TMQ36440.1;Name=TMQ36440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996462.1;locus_tag=AO053_09165;product=alpha-amylase;protein_id=TMQ36440.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	10226	10513	.	+	.	ID=gene-AO053_09170;Name=AO053_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09170
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	10226	10513	.	+	0	ID=cds-TMQ36441.1;Parent=gene-AO053_09170;Dbxref=NCBI_GP:TMQ36441.1;Name=TMQ36441.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625668.1;locus_tag=AO053_09170;product=50S ribosomal protein L25;protein_id=TMQ36441.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	10667	10741	.	-	.	ID=gene-AO053_09175;Name=AO053_09175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_09175
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	tRNA	10667	10741	.	-	.	ID=rna-AO053_09175;Parent=gene-AO053_09175;anticodon=(pos:complement(10707..10709));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09175;product=tRNA-Gln
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	exon	10667	10741	.	-	.	ID=exon-AO053_09175-1;Parent=rna-AO053_09175;anticodon=(pos:complement(10707..10709));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09175;product=tRNA-Gln
GCA_005888185.1|LNKP01000111.1	Genbank	gene	10789	10863	.	-	.	ID=gene-AO053_09180;Name=AO053_09180;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_09180
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	tRNA	10789	10863	.	-	.	ID=rna-AO053_09180;Parent=gene-AO053_09180;anticodon=(pos:complement(10829..10831));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09180;product=tRNA-Gln
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	exon	10789	10863	.	-	.	ID=exon-AO053_09180-1;Parent=rna-AO053_09180;anticodon=(pos:complement(10829..10831));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09180;product=tRNA-Gln
GCA_005888185.1|LNKP01000111.1	Genbank	gene	10892	10976	.	-	.	ID=gene-AO053_09185;Name=AO053_09185;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_09185
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	tRNA	10892	10976	.	-	.	ID=rna-AO053_09185;Parent=gene-AO053_09185;anticodon=(pos:complement(10940..10942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09185;product=tRNA-Leu
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	exon	10892	10976	.	-	.	ID=exon-AO053_09185-1;Parent=rna-AO053_09185;anticodon=(pos:complement(10940..10942));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09185;product=tRNA-Leu
GCA_005888185.1|LNKP01000111.1	Genbank	gene	10982	11058	.	-	.	ID=gene-AO053_09190;Name=AO053_09190;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_09190
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	tRNA	10982	11058	.	-	.	ID=rna-AO053_09190;Parent=gene-AO053_09190;anticodon=(pos:complement(11022..11024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09190;product=tRNA-Met
GCA_005888185.1|LNKP01000111.1	tRNAscan-SE	exon	10982	11058	.	-	.	ID=exon-AO053_09190-1;Parent=rna-AO053_09190;anticodon=(pos:complement(11022..11024));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09190;product=tRNA-Met
GCA_005888185.1|LNKP01000111.1	Genbank	gene	11366	11731	.	+	.	ID=gene-AO053_09195;Name=AO053_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09195
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	11366	11731	.	+	0	ID=cds-TMQ36442.1;Parent=gene-AO053_09195;Dbxref=NCBI_GP:TMQ36442.1;Name=TMQ36442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691218.1;locus_tag=AO053_09195;product=aspartate kinase;protein_id=TMQ36442.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	11860	13158	.	+	.	ID=gene-AO053_09200;Name=AO053_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09200
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	11860	13158	.	+	0	ID=cds-TMQ36443.1;Parent=gene-AO053_09200;Dbxref=NCBI_GP:TMQ36443.1;Name=TMQ36443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45283.2;locus_tag=AO053_09200;product=adenylosuccinate synthetase;protein_id=TMQ36443.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	13216	14043	.	-	.	ID=gene-AO053_09205;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=AO053_09205
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	13216	14043	.	-	0	ID=cds-TMQ36444.1;Parent=gene-AO053_09205;Dbxref=NCBI_GP:TMQ36444.1;Name=TMQ36444.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702447.1;locus_tag=AO053_09205;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=TMQ36444.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	14403	15413	.	+	.	ID=gene-AO053_09210;Name=AO053_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09210
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	14403	15413	.	+	0	ID=cds-TMQ36445.1;Parent=gene-AO053_09210;Dbxref=NCBI_GP:TMQ36445.1;Name=TMQ36445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL70.1;locus_tag=AO053_09210;product=transcriptional regulator;protein_id=TMQ36445.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	15596	18235	.	+	.	ID=gene-AO053_09215;Name=AO053_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09215
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	15596	18235	.	+	0	ID=cds-TMQ36446.1;Parent=gene-AO053_09215;Dbxref=NCBI_GP:TMQ36446.1;Name=TMQ36446.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43920.1;locus_tag=AO053_09215;product=phosphoenolpyruvate carboxylase;protein_id=TMQ36446.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	18273	19685	.	-	.	ID=gene-AO053_09220;Name=AO053_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09220
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	18273	19685	.	-	0	ID=cds-TMQ36447.1;Parent=gene-AO053_09220;Dbxref=NCBI_GP:TMQ36447.1;Name=TMQ36447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44280.1;locus_tag=AO053_09220;product=hypothetical protein;protein_id=TMQ36447.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	19755	21449	.	+	.	ID=gene-AO053_09225;Name=AO053_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09225
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	19755	21449	.	+	0	ID=cds-TMQ36448.1;Parent=gene-AO053_09225;Dbxref=NCBI_GP:TMQ36448.1;Name=TMQ36448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45285.1;locus_tag=AO053_09225;product=peptide ABC transporter substrate-binding protein;protein_id=TMQ36448.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	21449	22414	.	+	.	ID=gene-AO053_09230;Name=AO053_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09230
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	21449	22414	.	+	0	ID=cds-TMQ36449.1;Parent=gene-AO053_09230;Dbxref=NCBI_GP:TMQ36449.1;Name=TMQ36449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45286.1;locus_tag=AO053_09230;product=peptide ABC transporter permease;protein_id=TMQ36449.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	22404	23291	.	+	.	ID=gene-AO053_09235;Name=AO053_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09235
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	22404	23291	.	+	0	ID=cds-TMQ36450.1;Parent=gene-AO053_09235;Dbxref=NCBI_GP:TMQ36450.1;Name=TMQ36450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689227.1;locus_tag=AO053_09235;product=peptide ABC transporter permease;protein_id=TMQ36450.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	23295	24344	.	+	.	ID=gene-AO053_09240;Name=AO053_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09240
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	23295	24344	.	+	0	ID=cds-TMQ36451.1;Parent=gene-AO053_09240;Dbxref=NCBI_GP:TMQ36451.1;Name=TMQ36451.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550879.1;locus_tag=AO053_09240;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ36451.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	24344	25156	.	+	.	ID=gene-AO053_09245;Name=AO053_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09245
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	24344	25156	.	+	0	ID=cds-TMQ36452.1;Parent=gene-AO053_09245;Dbxref=NCBI_GP:TMQ36452.1;Name=TMQ36452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527789.1;locus_tag=AO053_09245;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ36452.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Protein Homology	pseudogene	25168	26183	.	+	.	ID=gene-AO053_09250;Name=AO053_09250;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09250;pseudo=true
GCA_005888185.1|LNKP01000111.1	Genbank	gene	26275	27084	.	-	.	ID=gene-AO053_09255;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=AO053_09255
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	26275	27084	.	-	0	ID=cds-TMQ36453.1;Parent=gene-AO053_09255;Dbxref=NCBI_GP:TMQ36453.1;Name=TMQ36453.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UIY2.1;locus_tag=AO053_09255;product=tRNA pseudouridine synthase A;protein_id=TMQ36453.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	27319	28320	.	+	.	ID=gene-AO053_09260;Name=AO053_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09260
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	27319	28320	.	+	0	ID=cds-TMQ36454.1;Parent=gene-AO053_09260;Dbxref=NCBI_GP:TMQ36454.1;Name=TMQ36454.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526005.1;locus_tag=AO053_09260;product=fructose 1%2C6-bisphosphatase;protein_id=TMQ36454.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	28355	28450	.	-	.	ID=gene-AO053_09265;Name=AO053_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09265
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	28355	28450	.	-	0	ID=cds-TMQ36455.1;Parent=gene-AO053_09265;Dbxref=NCBI_GP:TMQ36455.1;Name=TMQ36455.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647386.1;locus_tag=AO053_09265;product=cytidylate kinase;protein_id=TMQ36455.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	28727	30322	.	+	.	ID=gene-AO053_09270;Name=AO053_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09270
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	28727	30322	.	+	0	ID=cds-TMQ36476.1;Parent=gene-AO053_09270;Dbxref=NCBI_GP:TMQ36476.1;Name=TMQ36476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694228.1;locus_tag=AO053_09270;product=lactate permease;protein_id=TMQ36476.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	30684	33527	.	+	.	ID=gene-AO053_09275;Name=AO053_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09275
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	30684	33527	.	+	0	ID=cds-TMQ36456.1;Parent=gene-AO053_09275;Dbxref=NCBI_GP:TMQ36456.1;Name=TMQ36456.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526007.1;locus_tag=AO053_09275;product=TonB-dependent receptor;protein_id=TMQ36456.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	33605	34294	.	-	.	ID=gene-AO053_09280;Name=AO053_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09280
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	33605	34294	.	-	0	ID=cds-TMQ36457.1;Parent=gene-AO053_09280;Dbxref=NCBI_GP:TMQ36457.1;Name=TMQ36457.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500022.1;locus_tag=AO053_09280;product=5'-methylthioadenosine nucleosidase;protein_id=TMQ36457.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	34291	34998	.	-	.	ID=gene-AO053_09285;Name=AO053_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09285
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	34291	34998	.	-	0	ID=cds-TMQ36458.1;Parent=gene-AO053_09285;Dbxref=NCBI_GP:TMQ36458.1;Name=TMQ36458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996478.1;locus_tag=AO053_09285;product=hypothetical protein;protein_id=TMQ36458.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	34991	36718	.	-	.	ID=gene-AO053_09290;Name=AO053_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09290
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	34991	36718	.	-	0	ID=cds-TMQ36459.1;Parent=gene-AO053_09290;Dbxref=NCBI_GP:TMQ36459.1;Name=TMQ36459.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657100.1;locus_tag=AO053_09290;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=TMQ36459.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	37006	37695	.	-	.	ID=gene-AO053_09295;Name=AO053_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09295
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	37006	37695	.	-	0	ID=cds-TMQ36460.1;Parent=gene-AO053_09295;Dbxref=NCBI_GP:TMQ36460.1;Name=TMQ36460.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996480.1;locus_tag=AO053_09295;product=protein-disulfide isomerase;protein_id=TMQ36460.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	38036	38926	.	+	.	ID=gene-AO053_09300;Name=AO053_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09300
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	38036	38926	.	+	0	ID=cds-TMQ36461.1;Parent=gene-AO053_09300;Dbxref=NCBI_GP:TMQ36461.1;Name=TMQ36461.1;Note=catalyzes the release of newly synthesized polypeptide chains at the stop codons UAA and UGA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538332.1;locus_tag=AO053_09300;product=peptide chain release factor 2;protein_id=TMQ36461.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	39078	40586	.	+	.	ID=gene-AO053_09305;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AO053_09305
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	39078	40586	.	+	0	ID=cds-TMQ36462.1;Parent=gene-AO053_09305;Dbxref=NCBI_GP:TMQ36462.1;Name=TMQ36462.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCQ0.1;locus_tag=AO053_09305;product=lysine--tRNA ligase;protein_id=TMQ36462.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	40671	41606	.	-	.	ID=gene-AO053_09310;Name=AO053_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09310
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	40671	41606	.	-	0	ID=cds-TMQ36463.1;Parent=gene-AO053_09310;Dbxref=NCBI_GP:TMQ36463.1;Name=TMQ36463.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL89.1;locus_tag=AO053_09310;product=malate dehydrogenase;protein_id=TMQ36463.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	41813	42268	.	+	.	ID=gene-AO053_09315;Name=AO053_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09315
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	41813	42268	.	+	0	ID=cds-TMQ36464.1;Parent=gene-AO053_09315;Dbxref=NCBI_GP:TMQ36464.1;Name=TMQ36464.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526014.1;locus_tag=AO053_09315;product=arginine repressor;protein_id=TMQ36464.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	42268	43158	.	+	.	ID=gene-AO053_09320;Name=AO053_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09320
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	42268	43158	.	+	0	ID=cds-TMQ36465.1;Parent=gene-AO053_09320;Dbxref=NCBI_GP:TMQ36465.1;Name=TMQ36465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660470.1;locus_tag=AO053_09320;product=epimerase;protein_id=TMQ36465.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Protein Homology	pseudogene	43213	44735	.	-	.	ID=gene-AO053_09325;Name=AO053_09325;Note=disrupted;description=amidophosphoribosyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09325;pseudo=true
GCA_005888185.1|LNKP01000111.1	Genbank	gene	44746	45237	.	-	.	ID=gene-AO053_09330;Name=AO053_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09330
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	44746	45237	.	-	0	ID=cds-TMQ36466.1;Parent=gene-AO053_09330;Dbxref=NCBI_GP:TMQ36466.1;Name=TMQ36466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45108.1;locus_tag=AO053_09330;product=colicin V synthesis protein;protein_id=TMQ36466.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	45324	45767	.	-	.	ID=gene-AO053_09335;Name=AO053_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09335
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	45324	45767	.	-	0	ID=cds-TMQ36467.1;Parent=gene-AO053_09335;Dbxref=NCBI_GP:TMQ36467.1;Name=TMQ36467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670593.1;locus_tag=AO053_09335;product=hypothetical protein;protein_id=TMQ36467.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	45982	47187	.	+	.	ID=gene-AO053_09340;Name=AO053_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09340
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	45982	47187	.	+	0	ID=cds-TMQ36468.1;Parent=gene-AO053_09340;Dbxref=NCBI_GP:TMQ36468.1;Name=TMQ36468.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670595.1;locus_tag=AO053_09340;product=acetate kinase;protein_id=TMQ36468.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	47255	49390	.	+	.	ID=gene-AO053_09345;Name=AO053_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09345
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	47255	49390	.	+	0	ID=cds-TMQ36469.1;Parent=gene-AO053_09345;Dbxref=NCBI_GP:TMQ36469.1;Name=TMQ36469.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356701.1;locus_tag=AO053_09345;product=phosphate acetyltransferase;protein_id=TMQ36469.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	49466	49969	.	-	.	ID=gene-AO053_09350;Name=AO053_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09350
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	49466	49969	.	-	0	ID=cds-TMQ36470.1;Parent=gene-AO053_09350;Dbxref=NCBI_GP:TMQ36470.1;Name=TMQ36470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44126.1;locus_tag=AO053_09350;product=hypothetical protein;protein_id=TMQ36470.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	50100	51044	.	+	.	ID=gene-AO053_09355;Name=AO053_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09355
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	50100	51044	.	+	0	ID=cds-TMQ36471.1;Parent=gene-AO053_09355;Dbxref=NCBI_GP:TMQ36471.1;Name=TMQ36471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996489.1;locus_tag=AO053_09355;product=protein-(glutamine-N5) methyltransferase%2C ribosomal protein L3-specific;protein_id=TMQ36471.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	51103	52074	.	-	.	ID=gene-AO053_09360;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=AO053_09360
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	51103	52074	.	-	0	ID=cds-TMQ36472.1;Parent=gene-AO053_09360;Dbxref=NCBI_GP:TMQ36472.1;Name=TMQ36472.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660454.1;locus_tag=AO053_09360;product=LysR family transcriptional regulator;protein_id=TMQ36472.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	52085	53158	.	-	.	ID=gene-AO053_09365;Name=AO053_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09365
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	52085	53158	.	-	0	ID=cds-TMQ36473.1;Parent=gene-AO053_09365;Dbxref=NCBI_GP:TMQ36473.1;Name=TMQ36473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653704.1;locus_tag=AO053_09365;product=ribosomal large subunit pseudouridine synthase B;protein_id=TMQ36473.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	53206	53829	.	-	.	ID=gene-AO053_09370;Name=AO053_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09370
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	53206	53829	.	-	0	ID=cds-TMQ36474.1;Parent=gene-AO053_09370;Dbxref=NCBI_GP:TMQ36474.1;Name=TMQ36474.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500037.1;locus_tag=AO053_09370;product=threonylcarbamoyl-AMP synthase;protein_id=TMQ36474.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	gene	53950	54831	.	-	.	ID=gene-AO053_09375;Name=AO053_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09375
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	53950	54831	.	-	0	ID=cds-TMQ36475.1;Parent=gene-AO053_09375;Dbxref=NCBI_GP:TMQ36475.1;Name=TMQ36475.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526023.1;locus_tag=AO053_09375;product=succinyl-CoA synthetase subunit alpha;protein_id=TMQ36475.1;transl_table=11
GCA_005888185.1|LNKP01000111.1	Genbank	pseudogene	54831	55245	.	-	.	ID=gene-AO053_09380;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=AO053_09380;pseudo=true
GCA_005888185.1|LNKP01000111.1	Protein Homology	CDS	54831	55245	.	-	1	ID=cds-AO053_09380;Parent=gene-AO053_09380;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550899.1;locus_tag=AO053_09380;pseudo=true;transl_table=11
##sequence-region LNKP01000112.1 1 7696
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000112.1	Genbank	region	1	7696	.	+	.	ID=LNKP01000112.1:1..7696;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000112.1	Genbank	pseudogene	1	753	.	-	.	ID=gene-AO053_09385;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=AO053_09385;pseudo=true
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	1	753	.	-	0	ID=cds-AO053_09385;Parent=gene-AO053_09385;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550899.1;locus_tag=AO053_09385;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	789	1880	.	-	.	ID=gene-AO053_09390;Name=AO053_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09390
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	789	1880	.	-	0	ID=cds-TMQ36366.1;Parent=gene-AO053_09390;Dbxref=NCBI_GP:TMQ36366.1;Name=TMQ36366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45100.1;locus_tag=AO053_09390;product=rRNA methyltransferase;protein_id=TMQ36366.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	1873	2766	.	-	.	ID=gene-AO053_09395;Name=AO053_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09395
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	1873	2766	.	-	0	ID=cds-TMQ36367.1;Parent=gene-AO053_09395;Dbxref=NCBI_GP:TMQ36367.1;Name=TMQ36367.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691154.1;locus_tag=AO053_09395;product=transcriptional regulator;protein_id=TMQ36367.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	3241	4272	.	+	.	ID=gene-AO053_09400;Name=AO053_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09400
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	3241	4272	.	+	0	ID=cds-TMQ36368.1;Parent=gene-AO053_09400;Dbxref=NCBI_GP:TMQ36368.1;Name=TMQ36368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702114.1;locus_tag=AO053_09400;product=branched chain amino acid aminotransferase;protein_id=TMQ36368.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	4323	4466	.	-	.	ID=gene-AO053_09405;Name=AO053_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09405
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	4323	4466	.	-	0	ID=cds-TMQ36369.1;Parent=gene-AO053_09405;Dbxref=NCBI_GP:TMQ36369.1;Name=TMQ36369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44125.1;locus_tag=AO053_09405;product=hypothetical protein;protein_id=TMQ36369.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	4623	5306	.	+	.	ID=gene-AO053_09410;Name=AO053_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09410
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	4623	5306	.	+	0	ID=cds-TMQ36370.1;Parent=gene-AO053_09410;Dbxref=NCBI_GP:TMQ36370.1;Name=TMQ36370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLA8.1;locus_tag=AO053_09410;product=7-cyano-7-deazaguanine synthase;protein_id=TMQ36370.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	5299	5724	.	+	.	ID=gene-AO053_09415;Name=AO053_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09415
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	5299	5724	.	+	0	ID=cds-TMQ36371.1;Parent=gene-AO053_09415;Dbxref=NCBI_GP:TMQ36371.1;Name=TMQ36371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272433.1;locus_tag=AO053_09415;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=TMQ36371.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	5731	6360	.	+	.	ID=gene-AO053_09420;Name=AO053_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09420
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	5731	6360	.	+	0	ID=cds-TMQ36373.1;Parent=gene-AO053_09420;Dbxref=NCBI_GP:TMQ36373.1;Name=TMQ36373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702109.1;locus_tag=AO053_09420;product=radical SAM protein;protein_id=TMQ36373.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	gene	6755	6988	.	+	.	ID=gene-AO053_09425;Name=AO053_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09425
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	6755	6988	.	+	0	ID=cds-TMQ36372.1;Parent=gene-AO053_09425;Dbxref=NCBI_GP:TMQ36372.1;Name=TMQ36372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647470.1;locus_tag=AO053_09425;product=branched-chain amino acid aminotransferase;protein_id=TMQ36372.1;transl_table=11
GCA_005888185.1|LNKP01000112.1	Genbank	pseudogene	6972	7696	.	+	.	ID=gene-AO053_09430;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=pseudogene;locus_tag=AO053_09430;pseudo=true
GCA_005888185.1|LNKP01000112.1	Protein Homology	CDS	6972	7696	.	+	0	ID=cds-AO053_09430;Parent=gene-AO053_09430;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702108.1;locus_tag=AO053_09430;pseudo=true;transl_table=11
##sequence-region LNKP01000113.1 1 27190
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000113.1	Genbank	region	1	27190	.	+	.	ID=LNKP01000113.1:1..27190;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000113.1	Genbank	gene	1	1458	.	+	.	ID=gene-AO053_09435;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=AO053_09435;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	1	1458	.	+	0	ID=cds-TMQ36315.1;Parent=gene-AO053_09435;Dbxref=NCBI_GP:TMQ36315.1;Name=TMQ36315.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702108.1;locus_tag=AO053_09435;partial=true;product=DNA helicase II;protein_id=TMQ36315.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	1548	2549	.	+	.	ID=gene-AO053_09440;Name=AO053_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09440
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	1548	2549	.	+	0	ID=cds-TMQ36316.1;Parent=gene-AO053_09440;Dbxref=NCBI_GP:TMQ36316.1;Name=TMQ36316.1;Note=transports peptides consisting of two or three amino acids;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869147.1;locus_tag=AO053_09440;product=peptide ABC transporter permease;protein_id=TMQ36316.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	2564	3451	.	+	.	ID=gene-AO053_09445;Name=AO053_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09445
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	2564	3451	.	+	0	ID=cds-TMQ36317.1;Parent=gene-AO053_09445;Dbxref=NCBI_GP:TMQ36317.1;Name=TMQ36317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526030.1;locus_tag=AO053_09445;product=peptide transporter;protein_id=TMQ36317.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	3461	4453	.	+	.	ID=gene-AO053_09450;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=AO053_09450
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	3461	4453	.	+	0	ID=cds-TMQ36318.1;Parent=gene-AO053_09450;Dbxref=NCBI_GP:TMQ36318.1;Name=TMQ36318.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766872.1;locus_tag=AO053_09450;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ36318.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	4456	5439	.	+	.	ID=gene-AO053_09455;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=AO053_09455
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	4456	5439	.	+	0	ID=cds-TMQ36319.1;Parent=gene-AO053_09455;Dbxref=NCBI_GP:TMQ36319.1;Name=TMQ36319.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766871.1;locus_tag=AO053_09455;product=peptide ABC transporter ATP-binding protein;protein_id=TMQ36319.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	5468	6274	.	-	.	ID=gene-AO053_09460;Name=AO053_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09460
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	5468	6274	.	-	0	ID=cds-TMQ36320.1;Parent=gene-AO053_09460;Dbxref=NCBI_GP:TMQ36320.1;Name=TMQ36320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526032.1;locus_tag=AO053_09460;product=ATP-dependent DNA ligase;protein_id=TMQ36320.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	6481	7065	.	+	.	ID=gene-AO053_09465;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=AO053_09465
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	6481	7065	.	+	0	ID=cds-TMQ36321.1;Parent=gene-AO053_09465;Dbxref=NCBI_GP:TMQ36321.1;Name=TMQ36321.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526033.1;locus_tag=AO053_09465;product=phosphoheptose isomerase;protein_id=TMQ36321.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	7191	7922	.	+	.	ID=gene-AO053_09470;Name=AO053_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09470
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	7191	7922	.	+	0	ID=cds-TMQ36322.1;Parent=gene-AO053_09470;Dbxref=NCBI_GP:TMQ36322.1;Name=TMQ36322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691139.1;locus_tag=AO053_09470;product=arginine ABC transporter ATP-binding protein;protein_id=TMQ36322.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	7940	8659	.	+	.	ID=gene-AO053_09475;Name=AO053_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09475
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	7940	8659	.	+	0	ID=cds-TMQ36323.1;Parent=gene-AO053_09475;Dbxref=NCBI_GP:TMQ36323.1;Name=TMQ36323.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702104.1;locus_tag=AO053_09475;product=arginine ABC transporter substrate-binding protein;protein_id=TMQ36323.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	8663	9328	.	+	.	ID=gene-AO053_09480;Name=AO053_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09480
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	8663	9328	.	+	0	ID=cds-TMQ36324.1;Parent=gene-AO053_09480;Dbxref=NCBI_GP:TMQ36324.1;Name=TMQ36324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686494.1;locus_tag=AO053_09480;product=ABC transporter;protein_id=TMQ36324.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	9328	10011	.	+	.	ID=gene-AO053_09485;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=AO053_09485
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	9328	10011	.	+	0	ID=cds-TMQ36325.1;Parent=gene-AO053_09485;Dbxref=NCBI_GP:TMQ36325.1;Name=TMQ36325.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;inference=EXISTENCE: similar to AA sequence:SwissProt:P45089.1;locus_tag=AO053_09485;product=arginine transporter permease subunit ArtM;protein_id=TMQ36325.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Protein Homology	pseudogene	10469	13515	.	+	.	ID=gene-AO053_09490;Name=AO053_09490;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09490;pseudo=true
GCA_005888185.1|LNKP01000113.1	Genbank	gene	13613	14125	.	-	.	ID=gene-AO053_09495;Name=AO053_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09495
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	13613	14125	.	-	0	ID=cds-TMQ36326.1;Parent=gene-AO053_09495;Dbxref=NCBI_GP:TMQ36326.1;Name=TMQ36326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702101.1;locus_tag=AO053_09495;product=protein opa;protein_id=TMQ36326.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	14176	14691	.	-	.	ID=gene-AO053_09500;Name=AO053_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09500
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	14176	14691	.	-	0	ID=cds-TMQ36327.1;Parent=gene-AO053_09500;Dbxref=NCBI_GP:TMQ36327.1;Name=TMQ36327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996506.1;locus_tag=AO053_09500;product=Zn-dependent metalloprotease;protein_id=TMQ36327.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	14987	16141	.	-	.	ID=gene-AO053_09505;Name=AO053_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09505
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	14987	16141	.	-	0	ID=cds-TMQ36328.1;Parent=gene-AO053_09505;Dbxref=NCBI_GP:TMQ36328.1;Name=TMQ36328.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356717.1;locus_tag=AO053_09505;product=S-adenosylmethionine synthetase;protein_id=TMQ36328.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	16226	16807	.	-	.	ID=gene-AO053_09510;Name=AO053_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09510
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	16226	16807	.	-	0	ID=cds-TMQ36329.1;Parent=gene-AO053_09510;Dbxref=NCBI_GP:TMQ36329.1;Name=TMQ36329.1;Note=catalyzes the formation of anthranilate from chorismate and glutamine%3B functions in tryptophan biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667441.1;locus_tag=AO053_09510;product=anthranilate synthase;protein_id=TMQ36329.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	16849	17835	.	+	.	ID=gene-AO053_09515;Name=AO053_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09515
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	16849	17835	.	+	0	ID=cds-TMQ36330.1;Parent=gene-AO053_09515;Dbxref=NCBI_GP:TMQ36330.1;Name=TMQ36330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57527.1;locus_tag=AO053_09515;product=aminobenzoate synthetase;protein_id=TMQ36330.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	17835	18401	.	+	.	ID=gene-AO053_09520;Name=AO053_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09520
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	17835	18401	.	+	0	ID=cds-TMQ36331.1;Parent=gene-AO053_09520;Dbxref=NCBI_GP:TMQ36331.1;Name=TMQ36331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686486.1;locus_tag=AO053_09520;product=hypothetical protein;protein_id=TMQ36331.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	18441	18785	.	-	.	ID=gene-AO053_09525;Name=AO053_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09525
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	18441	18785	.	-	0	ID=cds-TMQ36332.1;Parent=gene-AO053_09525;Dbxref=NCBI_GP:TMQ36332.1;Name=TMQ36332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689309.1;locus_tag=AO053_09525;product=hypothetical protein;protein_id=TMQ36332.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	18976	20064	.	+	.	ID=gene-AO053_09530;Name=AO053_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09530
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	18976	20064	.	+	0	ID=cds-TMQ36333.1;Parent=gene-AO053_09530;Dbxref=NCBI_GP:TMQ36333.1;Name=TMQ36333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702096.1;locus_tag=AO053_09530;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=TMQ36333.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	20152	21252	.	+	.	ID=gene-AO053_09535;Name=AO053_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09535
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	20152	21252	.	+	0	ID=cds-TMQ36334.1;Parent=gene-AO053_09535;Dbxref=NCBI_GP:TMQ36334.1;Name=TMQ36334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657196.1;locus_tag=AO053_09535;product=aspartate aminotransferase;protein_id=TMQ36334.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	21328	21651	.	-	.	ID=gene-AO053_09540;Name=AO053_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09540
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	21328	21651	.	-	0	ID=cds-TMQ36335.1;Parent=gene-AO053_09540;Dbxref=NCBI_GP:TMQ36335.1;Name=TMQ36335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627223.1;locus_tag=AO053_09540;product=glutaredoxin;protein_id=TMQ36335.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	21802	22848	.	-	.	ID=gene-AO053_09545;Name=AO053_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09545
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	21802	22848	.	-	0	ID=cds-TMQ36336.1;Parent=gene-AO053_09545;Dbxref=NCBI_GP:TMQ36336.1;Name=TMQ36336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526046.1;locus_tag=AO053_09545;product=hypothetical protein;protein_id=TMQ36336.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	23234	26317	.	+	.	ID=gene-AO053_09550;Name=AO053_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09550
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	23234	26317	.	+	0	ID=cds-TMQ36337.1;Parent=gene-AO053_09550;Dbxref=NCBI_GP:TMQ36337.1;Name=TMQ36337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630418.1;locus_tag=AO053_09550;product=hypothetical protein;protein_id=TMQ36337.1;transl_table=11
GCA_005888185.1|LNKP01000113.1	Genbank	gene	26653	27054	.	+	.	ID=gene-AO053_09555;Name=AO053_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09555
GCA_005888185.1|LNKP01000113.1	Protein Homology	CDS	26653	27054	.	+	0	ID=cds-TMQ36338.1;Parent=gene-AO053_09555;Dbxref=NCBI_GP:TMQ36338.1;Name=TMQ36338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691118.1;locus_tag=AO053_09555;product=hypothetical protein;protein_id=TMQ36338.1;transl_table=11
##sequence-region LNKP01000114.1 1 8746
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000114.1	Genbank	region	1	8746	.	+	.	ID=LNKP01000114.1:1..8746;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000114.1	Genbank	gene	280	696	.	+	.	ID=gene-AO053_09560;Name=AO053_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09560
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	280	696	.	+	0	ID=cds-TMQ36290.1;Parent=gene-AO053_09560;Dbxref=NCBI_GP:TMQ36290.1;Name=TMQ36290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996517.1;locus_tag=AO053_09560;product=esterase;protein_id=TMQ36290.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	693	1664	.	+	.	ID=gene-AO053_09565;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AO053_09565
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	693	1664	.	+	0	ID=cds-TMQ36291.1;Parent=gene-AO053_09565;Dbxref=NCBI_GP:TMQ36291.1;Name=TMQ36291.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996518.1;locus_tag=AO053_09565;product=ferrochelatase;protein_id=TMQ36291.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	1738	2595	.	+	.	ID=gene-AO053_09570;Name=AO053_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09570
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	1738	2595	.	+	0	ID=cds-TMQ36292.1;Parent=gene-AO053_09570;Dbxref=NCBI_GP:TMQ36292.1;Name=TMQ36292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702090.1;locus_tag=AO053_09570;product=co-chaperone YbbN;protein_id=TMQ36292.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	2669	3625	.	+	.	ID=gene-AO053_09575;Name=AO053_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09575
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	2669	3625	.	+	0	ID=cds-TMQ36293.1;Parent=gene-AO053_09575;Dbxref=NCBI_GP:TMQ36293.1;Name=TMQ36293.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526052.1;locus_tag=AO053_09575;product=thioredoxin reductase;protein_id=TMQ36293.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	3688	5448	.	+	.	ID=gene-AO053_09580;Name=AO053_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09580
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	3688	5448	.	+	0	ID=cds-TMQ36294.1;Parent=gene-AO053_09580;Dbxref=NCBI_GP:TMQ36294.1;Name=TMQ36294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054470.1;locus_tag=AO053_09580;product=cysteine ABC transporter ATP-binding protein;protein_id=TMQ36294.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	5448	7178	.	+	.	ID=gene-AO053_09585;Name=AO053_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09585
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	5448	7178	.	+	0	ID=cds-TMQ36295.1;Parent=gene-AO053_09585;Dbxref=NCBI_GP:TMQ36295.1;Name=TMQ36295.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526054.1;locus_tag=AO053_09585;product=amino acid ABC transporter ATP-binding protein;protein_id=TMQ36295.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	7427	7894	.	+	.	ID=gene-AO053_09590;Name=AO053_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09590
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	7427	7894	.	+	0	ID=cds-TMQ36296.1;Parent=gene-AO053_09590;Dbxref=NCBI_GP:TMQ36296.1;Name=TMQ36296.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272410.1;locus_tag=AO053_09590;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=TMQ36296.1;transl_table=11
GCA_005888185.1|LNKP01000114.1	Genbank	gene	7951	8490	.	-	.	ID=gene-AO053_09595;Name=AO053_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09595
GCA_005888185.1|LNKP01000114.1	Protein Homology	CDS	7951	8490	.	-	0	ID=cds-TMQ36297.1;Parent=gene-AO053_09595;Dbxref=NCBI_GP:TMQ36297.1;Name=TMQ36297.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661327.1;locus_tag=AO053_09595;product=hypoxanthine phosphoribosyltransferase;protein_id=TMQ36297.1;transl_table=11
##sequence-region LNKP01000115.1 1 5960
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000115.1	Genbank	region	1	5960	.	+	.	ID=LNKP01000115.1:1..5960;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000115.1	Genbank	gene	1	731	.	+	.	ID=gene-AO053_09600;Name=AO053_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09600;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000115.1	Protein Homology	CDS	1	731	.	+	2	ID=cds-TMQ36251.1;Parent=gene-AO053_09600;Dbxref=NCBI_GP:TMQ36251.1;Name=TMQ36251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272550.1;locus_tag=AO053_09600;partial=true;product=lipopolysaccharide cholinephosphotransferase;protein_id=TMQ36251.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000115.1	Genbank	gene	769	2619	.	-	.	ID=gene-AO053_09605;Name=AO053_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09605
GCA_005888185.1|LNKP01000115.1	Protein Homology	CDS	769	2619	.	-	0	ID=cds-TMQ36252.1;Parent=gene-AO053_09605;Dbxref=NCBI_GP:TMQ36252.1;Name=TMQ36252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525889.1;locus_tag=AO053_09605;product=signal peptide peptidase SppA;protein_id=TMQ36252.1;transl_table=11
GCA_005888185.1|LNKP01000115.1	Genbank	gene	2716	3270	.	+	.	ID=gene-AO053_09610;Name=AO053_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09610
GCA_005888185.1|LNKP01000115.1	Protein Homology	CDS	2716	3270	.	+	0	ID=cds-TMQ36253.1;Parent=gene-AO053_09610;Dbxref=NCBI_GP:TMQ36253.1;Name=TMQ36253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996091.1;locus_tag=AO053_09610;product=NAD(P)H nitroreductase;protein_id=TMQ36253.1;transl_table=11
GCA_005888185.1|LNKP01000115.1	Genbank	gene	3317	3871	.	-	.	ID=gene-AO053_09615;Name=AO053_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09615
GCA_005888185.1|LNKP01000115.1	Protein Homology	CDS	3317	3871	.	-	0	ID=cds-TMQ36254.1;Parent=gene-AO053_09615;Dbxref=NCBI_GP:TMQ36254.1;Name=TMQ36254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688490.1;locus_tag=AO053_09615;product=hypothetical protein;protein_id=TMQ36254.1;transl_table=11
GCA_005888185.1|LNKP01000115.1	Genbank	gene	3871	4479	.	-	.	ID=gene-AO053_09620;Name=AO053_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09620
GCA_005888185.1|LNKP01000115.1	Protein Homology	CDS	3871	4479	.	-	0	ID=cds-TMQ36255.1;Parent=gene-AO053_09620;Dbxref=NCBI_GP:TMQ36255.1;Name=TMQ36255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525891.1;locus_tag=AO053_09620;product=NAD(P)H oxidoreductase;protein_id=TMQ36255.1;transl_table=11
GCA_005888185.1|LNKP01000115.1	Genbank	gene	4600	5844	.	-	.	ID=gene-AO053_09625;Name=AO053_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09625
GCA_005888185.1|LNKP01000115.1	Protein Homology	CDS	4600	5844	.	-	0	ID=cds-TMQ36256.1;Parent=gene-AO053_09625;Dbxref=NCBI_GP:TMQ36256.1;Name=TMQ36256.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527724.1;locus_tag=AO053_09625;product=serine/threonine transporter SstT;protein_id=TMQ36256.1;transl_table=11
##sequence-region LNKP01000116.1 1 264
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000116.1	Genbank	region	1	264	.	+	.	ID=LNKP01000116.1:1..264;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
##sequence-region LNKP01000117.1 1 4626
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000117.1	Genbank	region	1	4626	.	+	.	ID=LNKP01000117.1:1..4626;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000117.1	Genbank	gene	1	346	.	+	.	ID=gene-AO053_09630;Name=AO053_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09630;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000117.1	Protein Homology	CDS	1	346	.	+	1	ID=cds-TMQ36209.1;Parent=gene-AO053_09630;Dbxref=NCBI_GP:TMQ36209.1;Name=TMQ36209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641993.1;locus_tag=AO053_09630;partial=true;product=hypothetical protein;protein_id=TMQ36209.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000117.1	Genbank	gene	425	1513	.	-	.	ID=gene-AO053_09635;Name=AO053_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09635
GCA_005888185.1|LNKP01000117.1	Protein Homology	CDS	425	1513	.	-	0	ID=cds-TMQ36210.1;Parent=gene-AO053_09635;Dbxref=NCBI_GP:TMQ36210.1;Name=TMQ36210.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702367.1;locus_tag=AO053_09635;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=TMQ36210.1;transl_table=11
GCA_005888185.1|LNKP01000117.1	Genbank	gene	1730	2980	.	-	.	ID=gene-AO053_09640;Name=AO053_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09640
GCA_005888185.1|LNKP01000117.1	Protein Homology	CDS	1730	2980	.	-	0	ID=cds-TMQ36211.1;Parent=gene-AO053_09640;Dbxref=NCBI_GP:TMQ36211.1;Name=TMQ36211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644722.1;locus_tag=AO053_09640;product=lipoprotein-releasing protein LolC;protein_id=TMQ36211.1;transl_table=11
GCA_005888185.1|LNKP01000117.1	Genbank	gene	2980	3663	.	-	.	ID=gene-AO053_09645;Name=AO053_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09645
GCA_005888185.1|LNKP01000117.1	Protein Homology	CDS	2980	3663	.	-	0	ID=cds-TMQ36212.1;Parent=gene-AO053_09645;Dbxref=NCBI_GP:TMQ36212.1;Name=TMQ36212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637962.1;locus_tag=AO053_09645;product=ABC transporter ATP-binding protein;protein_id=TMQ36212.1;transl_table=11
GCA_005888185.1|LNKP01000117.1	Genbank	gene	3745	4386	.	-	.	ID=gene-AO053_09650;Name=AO053_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09650
GCA_005888185.1|LNKP01000117.1	Protein Homology	CDS	3745	4386	.	-	0	ID=cds-TMQ36213.1;Parent=gene-AO053_09650;Dbxref=NCBI_GP:TMQ36213.1;Name=TMQ36213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272544.1;locus_tag=AO053_09650;product=ATP-dependent dethiobiotin synthetase BioD;protein_id=TMQ36213.1;transl_table=11
GCA_005888185.1|LNKP01000117.1	Genbank	pseudogene	4399	4626	.	-	.	ID=gene-AO053_09655;Name=AO053_09655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09655;pseudo=true
GCA_005888185.1|LNKP01000117.1	Protein Homology	CDS	4399	4626	.	-	0	ID=cds-AO053_09655;Parent=gene-AO053_09655;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525898.1;locus_tag=AO053_09655;pseudo=true;transl_table=11
##sequence-region LNKP01000118.1 1 11906
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000118.1	Genbank	region	1	11906	.	+	.	ID=LNKP01000118.1:1..11906;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000118.1	Genbank	gene	1	552	.	-	.	ID=gene-AO053_09660;Name=AO053_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09660;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	1	552	.	-	0	ID=cds-TMQ36192.1;Parent=gene-AO053_09660;Dbxref=NCBI_GP:TMQ36192.1;Name=TMQ36192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525898.1;locus_tag=AO053_09660;partial=true;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=TMQ36192.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	540	1187	.	-	.	ID=gene-AO053_09665;Name=AO053_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09665
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	540	1187	.	-	0	ID=cds-TMQ36193.1;Parent=gene-AO053_09665;Dbxref=NCBI_GP:TMQ36193.1;Name=TMQ36193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702371.1;locus_tag=AO053_09665;product=hypothetical protein;protein_id=TMQ36193.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	1197	2339	.	-	.	ID=gene-AO053_09670;Name=AO053_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09670
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	1197	2339	.	-	0	ID=cds-TMQ36194.1;Parent=gene-AO053_09670;Dbxref=NCBI_GP:TMQ36194.1;Name=TMQ36194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QKR3.1;locus_tag=AO053_09670;product=8-amino-7-oxononanoate synthase;protein_id=TMQ36194.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	2348	3637	.	-	.	ID=gene-AO053_09675;Name=AO053_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09675
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	2348	3637	.	-	0	ID=cds-TMQ36204.1;Parent=gene-AO053_09675;Dbxref=NCBI_GP:TMQ36204.1;Name=TMQ36204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667065.1;locus_tag=AO053_09675;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=TMQ36204.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	3652	4833	.	-	.	ID=gene-AO053_09680;Name=AO053_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09680
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	3652	4833	.	-	0	ID=cds-TMQ36195.1;Parent=gene-AO053_09680;Dbxref=NCBI_GP:TMQ36195.1;Name=TMQ36195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996103.1;locus_tag=AO053_09680;product=permease;protein_id=TMQ36195.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	4833	5780	.	-	.	ID=gene-AO053_09685;Name=AO053_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09685
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	4833	5780	.	-	0	ID=cds-TMQ36196.1;Parent=gene-AO053_09685;Dbxref=NCBI_GP:TMQ36196.1;Name=TMQ36196.1;Note=Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45250.1;locus_tag=AO053_09685;product=glycerate dehydrogenase;protein_id=TMQ36196.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	5840	6694	.	-	.	ID=gene-AO053_09690;Name=AO053_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09690
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	5840	6694	.	-	0	ID=cds-TMQ36197.1;Parent=gene-AO053_09690;Dbxref=NCBI_GP:TMQ36197.1;Name=TMQ36197.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCE8.1;locus_tag=AO053_09690;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=TMQ36197.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	6709	7512	.	-	.	ID=gene-AO053_09695;Name=AO053_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09695
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	6709	7512	.	-	0	ID=cds-TMQ36198.1;Parent=gene-AO053_09695;Dbxref=NCBI_GP:TMQ36198.1;Name=TMQ36198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633474.1;locus_tag=AO053_09695;product=hypothetical protein;protein_id=TMQ36198.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	7512	8390	.	-	.	ID=gene-AO053_09700;Name=AO053_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09700
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	7512	8390	.	-	0	ID=cds-TMQ36199.1;Parent=gene-AO053_09700;Dbxref=NCBI_GP:TMQ36199.1;Name=TMQ36199.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702377.1;locus_tag=AO053_09700;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=TMQ36199.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	8390	8830	.	-	.	ID=gene-AO053_09705;Name=AO053_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09705
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	8390	8830	.	-	0	ID=cds-TMQ36200.1;Parent=gene-AO053_09705;Dbxref=NCBI_GP:TMQ36200.1;Name=TMQ36200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687758.1;locus_tag=AO053_09705;product=hypothetical protein;protein_id=TMQ36200.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	8883	9965	.	-	.	ID=gene-AO053_09710;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AO053_09710
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	8883	9965	.	-	0	ID=cds-TMQ36205.1;Parent=gene-AO053_09710;Dbxref=NCBI_GP:TMQ36205.1;Name=TMQ36205.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962000.1;locus_tag=AO053_09710;product=peptide chain release factor 1;protein_id=TMQ36205.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	10244	10795	.	-	.	ID=gene-AO053_09715;Name=AO053_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09715
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	10244	10795	.	-	0	ID=cds-TMQ36201.1;Parent=gene-AO053_09715;Dbxref=NCBI_GP:TMQ36201.1;Name=TMQ36201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525906.1;locus_tag=AO053_09715;product=hypothetical protein;protein_id=TMQ36201.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	10994	11530	.	-	.	ID=gene-AO053_09720;Name=AO053_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09720
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	10994	11530	.	-	0	ID=cds-TMQ36202.1;Parent=gene-AO053_09720;Dbxref=NCBI_GP:TMQ36202.1;Name=TMQ36202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651005.1;locus_tag=AO053_09720;product=ATPase;protein_id=TMQ36202.1;transl_table=11
GCA_005888185.1|LNKP01000118.1	Genbank	gene	11597	11725	.	-	.	ID=gene-AO053_09725;Name=AO053_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09725
GCA_005888185.1|LNKP01000118.1	Protein Homology	CDS	11597	11725	.	-	0	ID=cds-TMQ36203.1;Parent=gene-AO053_09725;Dbxref=NCBI_GP:TMQ36203.1;Name=TMQ36203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961994.1;locus_tag=AO053_09725;product=hypothetical protein;protein_id=TMQ36203.1;transl_table=11
##sequence-region LNKP01000119.1 1 6819
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000119.1	Genbank	region	1	6819	.	+	.	ID=LNKP01000119.1:1..6819;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000119.1	Genbank	pseudogene	1	2245	.	-	.	ID=gene-AO053_09730;Name=AO053_09730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09730;pseudo=true
GCA_005888185.1|LNKP01000119.1	Protein Homology	CDS	1	2245	.	-	0	ID=cds-AO053_09730;Parent=gene-AO053_09730;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525732.1;locus_tag=AO053_09730;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000119.1	Genbank	gene	2572	2647	.	+	.	ID=gene-AO053_09735;Name=AO053_09735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AO053_09735
GCA_005888185.1|LNKP01000119.1	tRNAscan-SE	tRNA	2572	2647	.	+	.	ID=rna-AO053_09735;Parent=gene-AO053_09735;anticodon=(pos:2605..2607);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09735;product=tRNA-Asn
GCA_005888185.1|LNKP01000119.1	tRNAscan-SE	exon	2572	2647	.	+	.	ID=exon-AO053_09735-1;Parent=rna-AO053_09735;anticodon=(pos:2605..2607);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=AO053_09735;product=tRNA-Asn
GCA_005888185.1|LNKP01000119.1	Genbank	gene	3066	5105	.	+	.	ID=gene-AO053_09740;Name=AO053_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09740
GCA_005888185.1|LNKP01000119.1	Protein Homology	CDS	3066	5105	.	+	0	ID=cds-TMQ36182.1;Parent=gene-AO053_09740;Dbxref=NCBI_GP:TMQ36182.1;Name=TMQ36182.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628806.1;locus_tag=AO053_09740;product=excinuclease ABC subunit B;protein_id=TMQ36182.1;transl_table=11
GCA_005888185.1|LNKP01000119.1	Genbank	gene	5136	6819	.	-	.	ID=gene-AO053_09745;Name=AO053_09745;end_range=6819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09745;partial=true
GCA_005888185.1|LNKP01000119.1	Protein Homology	CDS	5136	6819	.	-	1	ID=cds-TMQ36183.1;Parent=gene-AO053_09745;Dbxref=NCBI_GP:TMQ36183.1;Name=TMQ36183.1;end_range=6819,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995874.1;locus_tag=AO053_09745;partial=true;product=hypothetical protein;protein_id=TMQ36183.1;transl_table=11
##sequence-region LNKP01000120.1 1 20275
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000120.1	Genbank	region	1	20275	.	+	.	ID=LNKP01000120.1:1..20275;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000120.1	Genbank	pseudogene	1	240	.	-	.	ID=gene-AO053_09750;Name=AO053_09750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09750;pseudo=true
GCA_005888185.1|LNKP01000120.1	GeneMarkS+	CDS	1	240	.	-	0	ID=cds-AO053_09750;Parent=gene-AO053_09750;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_09750;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	509	2779	.	-	.	ID=gene-AO053_09755;Name=AO053_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09755
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	509	2779	.	-	0	ID=cds-TMQ36140.1;Parent=gene-AO053_09755;Dbxref=NCBI_GP:TMQ36140.1;Name=TMQ36140.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995873.1;locus_tag=AO053_09755;product=malic enzyme;protein_id=TMQ36140.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	2976	3596	.	+	.	ID=gene-AO053_09760;Name=AO053_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09760
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	2976	3596	.	+	0	ID=cds-TMQ36141.1;Parent=gene-AO053_09760;Dbxref=NCBI_GP:TMQ36141.1;Name=TMQ36141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692328.1;locus_tag=AO053_09760;product=hypothetical protein;protein_id=TMQ36141.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	3687	4385	.	+	.	ID=gene-AO053_09765;Name=AO053_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09765
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	3687	4385	.	+	0	ID=cds-TMQ36142.1;Parent=gene-AO053_09765;Dbxref=NCBI_GP:TMQ36142.1;Name=TMQ36142.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995871.1;locus_tag=AO053_09765;product=16S rRNA pseudouridine(516) synthase;protein_id=TMQ36142.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	4387	5583	.	+	.	ID=gene-AO053_09770;Name=AO053_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09770
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	4387	5583	.	+	0	ID=cds-TMQ36143.1;Parent=gene-AO053_09770;Dbxref=NCBI_GP:TMQ36143.1;Name=TMQ36143.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657593.1;locus_tag=AO053_09770;product=bicyclomycin/multidrug efflux system;protein_id=TMQ36143.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	5615	6415	.	-	.	ID=gene-AO053_09775;Name=AO053_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09775
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	5615	6415	.	-	0	ID=cds-TMQ36144.1;Parent=gene-AO053_09775;Dbxref=NCBI_GP:TMQ36144.1;Name=TMQ36144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646555.1;locus_tag=AO053_09775;product=hypothetical protein;protein_id=TMQ36144.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	6513	7175	.	+	.	ID=gene-AO053_09780;Name=AO053_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09780
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	6513	7175	.	+	0	ID=cds-TMQ36145.1;Parent=gene-AO053_09780;Dbxref=NCBI_GP:TMQ36145.1;Name=TMQ36145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652973.1;locus_tag=AO053_09780;product=hypothetical protein;protein_id=TMQ36145.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	7196	8305	.	+	.	ID=gene-AO053_09785;Name=AO053_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09785
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	7196	8305	.	+	0	ID=cds-TMQ36146.1;Parent=gene-AO053_09785;Dbxref=NCBI_GP:TMQ36146.1;Name=TMQ36146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525725.1;locus_tag=AO053_09785;product=gamma-glutamyl-phosphate reductase;protein_id=TMQ36146.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	8384	9529	.	-	.	ID=gene-AO053_09790;Name=AO053_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09790
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	8384	9529	.	-	0	ID=cds-TMQ36153.1;Parent=gene-AO053_09790;Dbxref=NCBI_GP:TMQ36153.1;Name=TMQ36153.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525724.1;locus_tag=AO053_09790;product=molecular chaperone DnaJ;protein_id=TMQ36153.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	9616	11523	.	-	.	ID=gene-AO053_09795;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AO053_09795
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	9616	11523	.	-	0	ID=cds-TMQ36147.1;Parent=gene-AO053_09795;Dbxref=NCBI_GP:TMQ36147.1;Name=TMQ36147.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670448.1;locus_tag=AO053_09795;product=molecular chaperone DnaK;protein_id=TMQ36147.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	11789	13231	.	+	.	ID=gene-AO053_09800;Name=AO053_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09800
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	11789	13231	.	+	0	ID=cds-TMQ36148.1;Parent=gene-AO053_09800;Dbxref=NCBI_GP:TMQ36148.1;Name=TMQ36148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961898.1;locus_tag=AO053_09800;product=hypothetical protein;protein_id=TMQ36148.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	13376	13834	.	-	.	ID=gene-AO053_09805;Name=AO053_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09805
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	13376	13834	.	-	0	ID=cds-TMQ36149.1;Parent=gene-AO053_09805;Dbxref=NCBI_GP:TMQ36149.1;Name=TMQ36149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630761.1;locus_tag=AO053_09805;product=methylglyoxal synthase;protein_id=TMQ36149.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	14135	16795	.	+	.	ID=gene-AO053_09810;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AO053_09810
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	14135	16795	.	+	0	ID=cds-TMQ36150.1;Parent=gene-AO053_09810;Dbxref=NCBI_GP:TMQ36150.1;Name=TMQ36150.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995863.1;locus_tag=AO053_09810;product=pyruvate dehydrogenase;protein_id=TMQ36150.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	16858	18504	.	+	.	ID=gene-AO053_09815;Name=AO053_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09815
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	16858	18504	.	+	0	ID=cds-TMQ36151.1;Parent=gene-AO053_09815;Dbxref=NCBI_GP:TMQ36151.1;Name=TMQ36151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45118.1;locus_tag=AO053_09815;product=dihydrolipoamide acetyltransferase;protein_id=TMQ36151.1;transl_table=11
GCA_005888185.1|LNKP01000120.1	Genbank	gene	18618	20042	.	+	.	ID=gene-AO053_09820;Name=AO053_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09820
GCA_005888185.1|LNKP01000120.1	Protein Homology	CDS	18618	20042	.	+	0	ID=cds-TMQ36152.1;Parent=gene-AO053_09820;Dbxref=NCBI_GP:TMQ36152.1;Name=TMQ36152.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272714.1;locus_tag=AO053_09820;product=dihydrolipoamide dehydrogenase;protein_id=TMQ36152.1;transl_table=11
##sequence-region LNKP01000121.1 1 4163
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000121.1	Genbank	region	1	4163	.	+	.	ID=LNKP01000121.1:1..4163;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000121.1	Genbank	gene	1	469	.	+	.	ID=gene-AO053_09825;Name=AO053_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09825;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000121.1	Protein Homology	CDS	1	469	.	+	1	ID=cds-TMQ36065.1;Parent=gene-AO053_09825;Dbxref=NCBI_GP:TMQ36065.1;Name=TMQ36065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550691.1;locus_tag=AO053_09825;partial=true;product=adenine phosphoribosyltransferase;protein_id=TMQ36065.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000121.1	Genbank	gene	481	2547	.	+	.	ID=gene-AO053_09830;Name=AO053_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09830
GCA_005888185.1|LNKP01000121.1	Protein Homology	CDS	481	2547	.	+	0	ID=cds-TMQ36066.1;Parent=gene-AO053_09830;Dbxref=NCBI_GP:TMQ36066.1;Name=TMQ36066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43746.1;locus_tag=AO053_09830;product=DNA polymerase III subunit gamma/tau;protein_id=TMQ36066.1;transl_table=11
GCA_005888185.1|LNKP01000121.1	Genbank	gene	2671	3297	.	+	.	ID=gene-AO053_09835;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=AO053_09835
GCA_005888185.1|LNKP01000121.1	Protein Homology	CDS	2671	3297	.	+	0	ID=cds-TMQ36067.1;Parent=gene-AO053_09835;Dbxref=NCBI_GP:TMQ36067.1;Name=TMQ36067.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:SwissProt:P43857.1;locus_tag=AO053_09835;product=uracil phosphoribosyltransferase;protein_id=TMQ36067.1;transl_table=11
GCA_005888185.1|LNKP01000121.1	Genbank	pseudogene	3401	4163	.	+	.	ID=gene-AO053_09840;Name=AO053_09840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09840;pseudo=true
GCA_005888185.1|LNKP01000121.1	Protein Homology	CDS	3401	4163	.	+	0	ID=cds-AO053_09840;Parent=gene-AO053_09840;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687348.1;locus_tag=AO053_09840;pseudo=true;transl_table=11
##sequence-region LNKP01000122.1 1 5322
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000122.1	Genbank	region	1	5322	.	+	.	ID=LNKP01000122.1:1..5322;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000122.1	Genbank	pseudogene	1	482	.	+	.	ID=gene-AO053_09845;Name=AO053_09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09845;pseudo=true
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	1	482	.	+	2	ID=cds-AO053_09845;Parent=gene-AO053_09845;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687348.1;locus_tag=AO053_09845;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	gene	548	1243	.	+	.	ID=gene-AO053_09850;Name=AO053_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09850
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	548	1243	.	+	0	ID=cds-TMQ36054.1;Parent=gene-AO053_09850;Dbxref=NCBI_GP:TMQ36054.1;Name=TMQ36054.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961892.1;locus_tag=AO053_09850;product=DnaA regulatory inactivator Hda;protein_id=TMQ36054.1;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	gene	1272	1592	.	-	.	ID=gene-AO053_09855;Name=AO053_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09855
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	1272	1592	.	-	0	ID=cds-TMQ36055.1;Parent=gene-AO053_09855;Dbxref=NCBI_GP:TMQ36055.1;Name=TMQ36055.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650140.1;locus_tag=AO053_09855;product=translation initiation factor Sui1;protein_id=TMQ36055.1;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	gene	1599	2291	.	-	.	ID=gene-AO053_09860;Name=AO053_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09860
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	1599	2291	.	-	0	ID=cds-TMQ36056.1;Parent=gene-AO053_09860;Dbxref=NCBI_GP:TMQ36056.1;Name=TMQ36056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691900.1;locus_tag=AO053_09860;product=orotidine 5'-phosphate decarboxylase;protein_id=TMQ36056.1;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	gene	2315	3505	.	-	.	ID=gene-AO053_09865;Name=AO053_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09865
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	2315	3505	.	-	0	ID=cds-TMQ36057.1;Parent=gene-AO053_09865;Dbxref=NCBI_GP:TMQ36057.1;Name=TMQ36057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44130.1;locus_tag=AO053_09865;product=hypothetical protein;protein_id=TMQ36057.1;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	gene	3505	3798	.	-	.	ID=gene-AO053_09870;Name=AO053_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09870
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	3505	3798	.	-	0	ID=cds-TMQ36058.1;Parent=gene-AO053_09870;Dbxref=NCBI_GP:TMQ36058.1;Name=TMQ36058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691896.1;locus_tag=AO053_09870;product=hypothetical protein;protein_id=TMQ36058.1;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	gene	3873	4157	.	-	.	ID=gene-AO053_09875;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=AO053_09875
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	3873	4157	.	-	0	ID=cds-TMQ36059.1;Parent=gene-AO053_09875;Dbxref=NCBI_GP:TMQ36059.1;Name=TMQ36059.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005683713.1;locus_tag=AO053_09875;product=integration host factor subunit beta;protein_id=TMQ36059.1;transl_table=11
GCA_005888185.1|LNKP01000122.1	Genbank	pseudogene	4280	5322	.	-	.	ID=gene-AO053_09880;Name=AO053_09880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09880;pseudo=true
GCA_005888185.1|LNKP01000122.1	Protein Homology	CDS	4280	5322	.	-	2	ID=cds-AO053_09880;Parent=gene-AO053_09880;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011200649.1;locus_tag=AO053_09880;pseudo=true;transl_table=11
##sequence-region LNKP01000123.1 1 1860
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000123.1	Genbank	region	1	1860	.	+	.	ID=LNKP01000123.1:1..1860;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000123.1	Genbank	pseudogene	1	605	.	-	.	ID=gene-AO053_09885;Name=AO053_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09885;pseudo=true
GCA_005888185.1|LNKP01000123.1	Protein Homology	CDS	1	605	.	-	0	ID=cds-AO053_09885;Parent=gene-AO053_09885;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652927.1;locus_tag=AO053_09885;pseudo=true;transl_table=11
GCA_005888185.1|LNKP01000123.1	Genbank	gene	702	1379	.	-	.	ID=gene-AO053_09890;Name=AO053_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09890
GCA_005888185.1|LNKP01000123.1	Protein Homology	CDS	702	1379	.	-	0	ID=cds-TMQ36045.1;Parent=gene-AO053_09890;Dbxref=NCBI_GP:TMQ36045.1;Name=TMQ36045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650123.1;locus_tag=AO053_09890;product=cytidylate kinase;protein_id=TMQ36045.1;transl_table=11
##sequence-region LNKP01000124.1 1 1547
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000124.1	Genbank	region	1	1547	.	+	.	ID=LNKP01000124.1:1..1547;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000124.1	Genbank	gene	27	902	.	+	.	ID=gene-AO053_09895;Name=AO053_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09895
GCA_005888185.1|LNKP01000124.1	Protein Homology	CDS	27	902	.	+	0	ID=cds-TMQ36043.1;Parent=gene-AO053_09895;Dbxref=NCBI_GP:TMQ36043.1;Name=TMQ36043.1;Note=with PdxT forms pyridoxal 5'-phosphate from glutamine%2C either ribose 5-phosphate or ribulose 5-phosphate%2C and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UF86.1;locus_tag=AO053_09895;product=pyridoxal biosynthesis lyase PdxS;protein_id=TMQ36043.1;transl_table=11
GCA_005888185.1|LNKP01000124.1	Genbank	gene	903	1481	.	+	.	ID=gene-AO053_09900;Name=AO053_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09900
GCA_005888185.1|LNKP01000124.1	Protein Homology	CDS	903	1481	.	+	0	ID=cds-TMQ36044.1;Parent=gene-AO053_09900;Dbxref=NCBI_GP:TMQ36044.1;Name=TMQ36044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525713.1;locus_tag=AO053_09900;product=glutamine amidotransferase;protein_id=TMQ36044.1;transl_table=11
##sequence-region LNKP01000125.1 1 15197
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000125.1	Genbank	region	1	15197	.	+	.	ID=LNKP01000125.1:1..15197;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000125.1	Genbank	gene	480	2174	.	-	.	ID=gene-AO053_09905;Name=AO053_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09905
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	480	2174	.	-	0	ID=cds-TMQ36018.1;Parent=gene-AO053_09905;Dbxref=NCBI_GP:TMQ36018.1;Name=TMQ36018.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650117.1;locus_tag=AO053_09905;product=lactate dehydrogenase;protein_id=TMQ36018.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	2434	2544	.	+	.	ID=gene-AO053_09910;Name=AO053_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09910
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	2434	2544	.	+	0	ID=cds-TMQ36019.1;Parent=gene-AO053_09910;Dbxref=NCBI_GP:TMQ36019.1;Name=TMQ36019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44281.1;locus_tag=AO053_09910;product=hypothetical protein;protein_id=TMQ36019.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Protein Homology	pseudogene	2660	2871	.	-	.	ID=gene-AO053_09915;Name=AO053_09915;Note=disrupted;description=hypothetical protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_09915;pseudo=true
GCA_005888185.1|LNKP01000125.1	Genbank	gene	3136	3360	.	+	.	ID=gene-AO053_09920;Name=AO053_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09920
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	3136	3360	.	+	0	ID=cds-TMQ36020.1;Parent=gene-AO053_09920;Dbxref=NCBI_GP:TMQ36020.1;Name=TMQ36020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657643.1;locus_tag=AO053_09920;product=transposase;protein_id=TMQ36020.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	3485	4036	.	-	.	ID=gene-AO053_09925;Name=AO053_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09925
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	3485	4036	.	-	0	ID=cds-TMQ36021.1;Parent=gene-AO053_09925;Dbxref=NCBI_GP:TMQ36021.1;Name=TMQ36021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667211.1;locus_tag=AO053_09925;product=endopeptidase;protein_id=TMQ36021.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	4152	5600	.	-	.	ID=gene-AO053_09930;Name=AO053_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09930
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	4152	5600	.	-	0	ID=cds-TMQ36022.1;Parent=gene-AO053_09930;Dbxref=NCBI_GP:TMQ36022.1;Name=TMQ36022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45297.1;locus_tag=AO053_09930;product=protein TldD;protein_id=TMQ36022.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	5702	6553	.	-	.	ID=gene-AO053_09935;Name=AO053_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09935
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	5702	6553	.	-	0	ID=cds-TMQ36023.1;Parent=gene-AO053_09935;Dbxref=NCBI_GP:TMQ36023.1;Name=TMQ36023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632528.1;locus_tag=AO053_09935;product=tetrapyrrole methylase;protein_id=TMQ36023.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	6625	8352	.	+	.	ID=gene-AO053_09940;Name=AO053_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09940
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	6625	8352	.	+	0	ID=cds-TMQ36024.1;Parent=gene-AO053_09940;Dbxref=NCBI_GP:TMQ36024.1;Name=TMQ36024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645073.1;locus_tag=AO053_09940;product=penicillin-binding protein;protein_id=TMQ36024.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	8352	8711	.	+	.	ID=gene-AO053_09945;Name=AO053_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09945
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	8352	8711	.	+	0	ID=cds-TMQ36025.1;Parent=gene-AO053_09945;Dbxref=NCBI_GP:TMQ36025.1;Name=TMQ36025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702458.1;locus_tag=AO053_09945;product=hypothetical protein;protein_id=TMQ36025.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	8724	9308	.	+	.	ID=gene-AO053_09950;Name=AO053_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09950
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	8724	9308	.	+	0	ID=cds-TMQ36026.1;Parent=gene-AO053_09950;Dbxref=NCBI_GP:TMQ36026.1;Name=TMQ36026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P52606.2;locus_tag=AO053_09950;product=hypothetical protein;protein_id=TMQ36026.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	9365	9946	.	+	.	ID=gene-AO053_09955;Name=AO053_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09955
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	9365	9946	.	+	0	ID=cds-TMQ36027.1;Parent=gene-AO053_09955;Dbxref=NCBI_GP:TMQ36027.1;Name=TMQ36027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961885.1;locus_tag=AO053_09955;product=hypothetical protein;protein_id=TMQ36027.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	10201	12471	.	+	.	ID=gene-AO053_09960;Name=AO053_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09960
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	10201	12471	.	+	0	ID=cds-TMQ36028.1;Parent=gene-AO053_09960;Dbxref=NCBI_GP:TMQ36028.1;Name=TMQ36028.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356743.1;locus_tag=AO053_09960;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=TMQ36028.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	12614	13744	.	+	.	ID=gene-AO053_09965;Name=AO053_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09965
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	12614	13744	.	+	0	ID=cds-TMQ36029.1;Parent=gene-AO053_09965;Dbxref=NCBI_GP:TMQ36029.1;Name=TMQ36029.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659688.1;locus_tag=AO053_09965;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=TMQ36029.1;transl_table=11
GCA_005888185.1|LNKP01000125.1	Genbank	gene	13860	15089	.	-	.	ID=gene-AO053_09970;Name=AO053_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09970
GCA_005888185.1|LNKP01000125.1	Protein Homology	CDS	13860	15089	.	-	0	ID=cds-TMQ36030.1;Parent=gene-AO053_09970;Dbxref=NCBI_GP:TMQ36030.1;Name=TMQ36030.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654196.1;locus_tag=AO053_09970;product=dihydrolipoamide succinyltransferase;protein_id=TMQ36030.1;transl_table=11
##sequence-region LNKP01000126.1 1 8834
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000126.1	Genbank	region	1	8834	.	+	.	ID=LNKP01000126.1:1..8834;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000126.1	Genbank	gene	1	2801	.	-	.	ID=gene-AO053_09975;Name=AO053_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09975;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	1	2801	.	-	0	ID=cds-TMQ35938.1;Parent=gene-AO053_09975;Dbxref=NCBI_GP:TMQ35938.1;Name=TMQ35938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702461.1;locus_tag=AO053_09975;partial=true;product=2-oxoglutarate dehydrogenase subunit E1;protein_id=TMQ35938.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000126.1	Genbank	gene	3011	3649	.	-	.	ID=gene-AO053_09980;Name=AO053_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09980
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	3011	3649	.	-	0	ID=cds-TMQ35939.1;Parent=gene-AO053_09980;Dbxref=NCBI_GP:TMQ35939.1;Name=TMQ35939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691873.1;locus_tag=AO053_09980;product=MBL fold metallo-hydrolase;protein_id=TMQ35939.1;transl_table=11
GCA_005888185.1|LNKP01000126.1	Genbank	gene	3659	4414	.	-	.	ID=gene-AO053_09985;Name=AO053_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09985
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	3659	4414	.	-	0	ID=cds-TMQ35940.1;Parent=gene-AO053_09985;Dbxref=NCBI_GP:TMQ35940.1;Name=TMQ35940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525702.1;locus_tag=AO053_09985;product=deoxyribonuclease;protein_id=TMQ35940.1;transl_table=11
GCA_005888185.1|LNKP01000126.1	Genbank	gene	4466	5026	.	-	.	ID=gene-AO053_09990;Name=AO053_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09990
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	4466	5026	.	-	0	ID=cds-TMQ35941.1;Parent=gene-AO053_09990;Dbxref=NCBI_GP:TMQ35941.1;Name=TMQ35941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664987.1;locus_tag=AO053_09990;product=hypothetical protein;protein_id=TMQ35941.1;transl_table=11
GCA_005888185.1|LNKP01000126.1	Genbank	gene	5042	6511	.	-	.	ID=gene-AO053_09995;Name=AO053_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_09995
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	5042	6511	.	-	0	ID=cds-TMQ35942.1;Parent=gene-AO053_09995;Dbxref=NCBI_GP:TMQ35942.1;Name=TMQ35942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550681.1;locus_tag=AO053_09995;product=L%2CD-transpeptidase;protein_id=TMQ35942.1;transl_table=11
GCA_005888185.1|LNKP01000126.1	Genbank	gene	6585	8666	.	-	.	ID=gene-AO053_10000;Name=AO053_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10000
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	6585	8666	.	-	0	ID=cds-TMQ35943.1;Parent=gene-AO053_10000;Dbxref=NCBI_GP:TMQ35943.1;Name=TMQ35943.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659693.1;locus_tag=AO053_10000;product=carboxy-terminal protease;protein_id=TMQ35943.1;transl_table=11
GCA_005888185.1|LNKP01000126.1	Genbank	pseudogene	8694	8834	.	-	.	ID=gene-AO053_10005;Name=AO053_10005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_10005;pseudo=true
GCA_005888185.1|LNKP01000126.1	Protein Homology	CDS	8694	8834	.	-	0	ID=cds-AO053_10005;Parent=gene-AO053_10005;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44286.3;locus_tag=AO053_10005;pseudo=true;transl_table=11
##sequence-region LNKP01000127.1 1 28749
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000127.1	Genbank	region	1	28749	.	+	.	ID=LNKP01000127.1:1..28749;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000127.1	Genbank	gene	1	496	.	-	.	ID=gene-AO053_10010;Name=AO053_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10010;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	1	496	.	-	0	ID=cds-TMQ35891.1;Parent=gene-AO053_10010;Dbxref=NCBI_GP:TMQ35891.1;Name=TMQ35891.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44286.3;locus_tag=AO053_10010;partial=true;product=prop expression regulator;protein_id=TMQ35891.1;start_range=.,1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	681	1931	.	+	.	ID=gene-AO053_10015;Name=AO053_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10015
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	681	1931	.	+	0	ID=cds-TMQ35892.1;Parent=gene-AO053_10015;Dbxref=NCBI_GP:TMQ35892.1;Name=TMQ35892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657684.1;locus_tag=AO053_10015;product=hypothetical protein;protein_id=TMQ35892.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	1915	4560	.	+	.	ID=gene-AO053_10020;Name=AO053_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10020
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	1915	4560	.	+	0	ID=cds-TMQ35893.1;Parent=gene-AO053_10020;Dbxref=NCBI_GP:TMQ35893.1;Name=TMQ35893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995833.1;locus_tag=AO053_10020;product=hypothetical protein;protein_id=TMQ35893.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	4615	5067	.	-	.	ID=gene-AO053_10025;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=AO053_10025
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	4615	5067	.	-	0	ID=cds-TMQ35894.1;Parent=gene-AO053_10025;Dbxref=NCBI_GP:TMQ35894.1;Name=TMQ35894.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaE;inference=EXISTENCE: similar to AA sequence:SwissProt:P45308.1;locus_tag=AO053_10025;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=TMQ35894.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	5068	5313	.	-	.	ID=gene-AO053_10030;Name=AO053_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10030
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	5068	5313	.	-	0	ID=cds-TMQ35895.1;Parent=gene-AO053_10030;Dbxref=NCBI_GP:TMQ35895.1;Name=TMQ35895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631889.1;locus_tag=AO053_10030;product=molybdopterin synthase sulfur carrier subunit;protein_id=TMQ35895.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	5315	5797	.	-	.	ID=gene-AO053_10035;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=AO053_10035
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	5315	5797	.	-	0	ID=cds-TMQ35896.1;Parent=gene-AO053_10035;Dbxref=NCBI_GP:TMQ35896.1;Name=TMQ35896.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005762140.1;locus_tag=AO053_10035;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=TMQ35896.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	5889	6902	.	-	.	ID=gene-AO053_10040;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=AO053_10040
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	5889	6902	.	-	0	ID=cds-TMQ35897.1;Parent=gene-AO053_10040;Dbxref=NCBI_GP:TMQ35897.1;Name=TMQ35897.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525696.1;locus_tag=AO053_10040;product=cyclic pyranopterin phosphate synthase MoaA;protein_id=TMQ35897.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	7269	7645	.	-	.	ID=gene-AO053_10145;Name=AO053_10145;gbkey=Gene;gene_biotype=RNase_P_RNA;locus_tag=AO053_10145
GCA_005888185.1|LNKP01000127.1	cmsearch	RNase_P_RNA	7269	7645	.	-	.	ID=rna-AO053_10145;Parent=gene-AO053_10145;gbkey=ncRNA;locus_tag=AO053_10145;product=bacterial RNase P
GCA_005888185.1|LNKP01000127.1	cmsearch	exon	7269	7645	.	-	.	ID=exon-AO053_10145-1;Parent=rna-AO053_10145;gbkey=ncRNA;locus_tag=AO053_10145;product=bacterial RNase P
GCA_005888185.1|LNKP01000127.1	Genbank	gene	7806	8741	.	+	.	ID=gene-AO053_10045;Name=AO053_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10045
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	7806	8741	.	+	0	ID=cds-TMQ35898.1;Parent=gene-AO053_10045;Dbxref=NCBI_GP:TMQ35898.1;Name=TMQ35898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687393.1;locus_tag=AO053_10045;product=arabinose-5-phosphate isomerase;protein_id=TMQ35898.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	8751	9293	.	+	.	ID=gene-AO053_10050;Name=AO053_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10050
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	8751	9293	.	+	0	ID=cds-TMQ35899.1;Parent=gene-AO053_10050;Dbxref=NCBI_GP:TMQ35899.1;Name=TMQ35899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702472.1;locus_tag=AO053_10050;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=TMQ35899.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	9367	11559	.	-	.	ID=gene-AO053_10055;Name=AO053_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10055
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	9367	11559	.	-	0	ID=cds-TMQ35900.1;Parent=gene-AO053_10055;Dbxref=NCBI_GP:TMQ35900.1;Name=TMQ35900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654153.1;locus_tag=AO053_10055;product=hypothetical protein;protein_id=TMQ35900.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	11627	12292	.	-	.	ID=gene-AO053_10060;Name=AO053_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10060
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	11627	12292	.	-	0	ID=cds-TMQ35901.1;Parent=gene-AO053_10060;Dbxref=NCBI_GP:TMQ35901.1;Name=TMQ35901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650041.1;locus_tag=AO053_10060;product=hypothetical protein;protein_id=TMQ35901.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	12492	13553	.	+	.	ID=gene-AO053_10065;Name=AO053_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10065
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	12492	13553	.	+	0	ID=cds-TMQ35902.1;Parent=gene-AO053_10065;Dbxref=NCBI_GP:TMQ35902.1;Name=TMQ35902.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691843.1;locus_tag=AO053_10065;product=peptidase;protein_id=TMQ35902.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	13711	14565	.	+	.	ID=gene-AO053_10070;Name=AO053_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10070
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	13711	14565	.	+	0	ID=cds-TMQ35903.1;Parent=gene-AO053_10070;Dbxref=NCBI_GP:TMQ35903.1;Name=TMQ35903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995825.1;locus_tag=AO053_10070;product=plastocyanin;protein_id=TMQ35903.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	14774	15352	.	+	.	ID=gene-AO053_10075;Name=AO053_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10075
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	14774	15352	.	+	0	ID=cds-TMQ35904.1;Parent=gene-AO053_10075;Dbxref=NCBI_GP:TMQ35904.1;Name=TMQ35904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355691.1;locus_tag=AO053_10075;product=electron transporter RsxA;protein_id=TMQ35904.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	15440	16021	.	+	.	ID=gene-AO053_10080;Name=AO053_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10080
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	15440	16021	.	+	0	ID=cds-TMQ35905.1;Parent=gene-AO053_10080;Dbxref=NCBI_GP:TMQ35905.1;Name=TMQ35905.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P71396.1;locus_tag=AO053_10080;product=electron transporter RnfB;protein_id=TMQ35905.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	16022	17974	.	+	.	ID=gene-AO053_10085;Name=AO053_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10085
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	16022	17974	.	+	0	ID=cds-TMQ35906.1;Parent=gene-AO053_10085;Dbxref=NCBI_GP:TMQ35906.1;Name=TMQ35906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525692.1;locus_tag=AO053_10085;product=electron transporter RnfC;protein_id=TMQ35906.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	17979	19055	.	+	.	ID=gene-AO053_10090;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=AO053_10090
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	17979	19055	.	+	0	ID=cds-TMQ35907.1;Parent=gene-AO053_10090;Dbxref=NCBI_GP:TMQ35907.1;Name=TMQ35907.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658204.1;locus_tag=AO053_10090;product=electron transporter RnfD;protein_id=TMQ35907.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	19055	19678	.	+	.	ID=gene-AO053_10095;Name=AO053_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10095
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	19055	19678	.	+	0	ID=cds-TMQ35908.1;Parent=gene-AO053_10095;Dbxref=NCBI_GP:TMQ35908.1;Name=TMQ35908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642401.1;locus_tag=AO053_10095;product=electron transport complex subunit G;protein_id=TMQ35908.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	19680	20387	.	+	.	ID=gene-AO053_10100;Name=AO053_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10100
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	19680	20387	.	+	0	ID=cds-TMQ35909.1;Parent=gene-AO053_10100;Dbxref=NCBI_GP:TMQ35909.1;Name=TMQ35909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57020.1;locus_tag=AO053_10100;product=elongation factor G;protein_id=TMQ35909.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	20509	21144	.	+	.	ID=gene-AO053_10105;Name=AO053_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10105
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	20509	21144	.	+	0	ID=cds-TMQ35910.1;Parent=gene-AO053_10105;Dbxref=NCBI_GP:TMQ35910.1;Name=TMQ35910.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689727.1;locus_tag=AO053_10105;product=endonuclease III;protein_id=TMQ35910.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Protein Homology	pseudogene	21202	21682	.	+	.	ID=gene-AO053_10110;Name=AO053_10110;Note=disrupted;description=transporter;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AO053_10110;pseudo=true
GCA_005888185.1|LNKP01000127.1	Genbank	gene	21880	23130	.	-	.	ID=gene-AO053_10115;Name=AO053_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10115
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	21880	23130	.	-	0	ID=cds-TMQ35911.1;Parent=gene-AO053_10115;Dbxref=NCBI_GP:TMQ35911.1;Name=TMQ35911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525688.1;locus_tag=AO053_10115;product=fimbrial protein;protein_id=TMQ35911.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	23123	23776	.	-	.	ID=gene-AO053_10120;Name=AO053_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10120
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	23123	23776	.	-	0	ID=cds-TMQ35912.1;Parent=gene-AO053_10120;Dbxref=NCBI_GP:TMQ35912.1;Name=TMQ35912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525687.1;locus_tag=AO053_10120;product=fimbrial protein;protein_id=TMQ35912.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	23769	24407	.	-	.	ID=gene-AO053_10125;Name=AO053_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10125
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	23769	24407	.	-	0	ID=cds-TMQ35913.1;Parent=gene-AO053_10125;Dbxref=NCBI_GP:TMQ35913.1;Name=TMQ35913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525686.1;locus_tag=AO053_10125;product=fimbrial protein;protein_id=TMQ35913.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	24408	26990	.	-	.	ID=gene-AO053_10130;Name=AO053_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10130
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	24408	26990	.	-	0	ID=cds-TMQ35914.1;Parent=gene-AO053_10130;Dbxref=NCBI_GP:TMQ35914.1;Name=TMQ35914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632577.1;locus_tag=AO053_10130;product=usher protein;protein_id=TMQ35914.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	27182	27889	.	-	.	ID=gene-AO053_10135;Name=AO053_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10135
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	27182	27889	.	-	0	ID=cds-TMQ35915.1;Parent=gene-AO053_10135;Dbxref=NCBI_GP:TMQ35915.1;Name=TMQ35915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995814.1;locus_tag=AO053_10135;product=molecular chaperone;protein_id=TMQ35915.1;transl_table=11
GCA_005888185.1|LNKP01000127.1	Genbank	gene	27968	28618	.	-	.	ID=gene-AO053_10140;Name=AO053_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10140
GCA_005888185.1|LNKP01000127.1	Protein Homology	CDS	27968	28618	.	-	0	ID=cds-TMQ35916.1;Parent=gene-AO053_10140;Dbxref=NCBI_GP:TMQ35916.1;Name=TMQ35916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525683.1;locus_tag=AO053_10140;product=fimbrial protein;protein_id=TMQ35916.1;transl_table=11
##sequence-region LNKP01000128.1 1 4239
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000128.1	Genbank	region	1	4239	.	+	.	ID=LNKP01000128.1:1..4239;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000128.1	Genbank	gene	66	407	.	-	.	ID=gene-AO053_10150;Name=AO053_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10150
GCA_005888185.1|LNKP01000128.1	GeneMarkS+	CDS	66	407	.	-	0	ID=cds-TMQ35858.1;Parent=gene-AO053_10150;Dbxref=NCBI_GP:TMQ35858.1;Name=TMQ35858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=AO053_10150;product=hypothetical protein;protein_id=TMQ35858.1;transl_table=11
GCA_005888185.1|LNKP01000128.1	Genbank	gene	516	1571	.	-	.	ID=gene-AO053_10155;Name=AO053_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10155
GCA_005888185.1|LNKP01000128.1	Protein Homology	CDS	516	1571	.	-	0	ID=cds-TMQ35859.1;Parent=gene-AO053_10155;Dbxref=NCBI_GP:TMQ35859.1;Name=TMQ35859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054725.1;locus_tag=AO053_10155;product=molybdenum ABC transporter ATP-binding protein;protein_id=TMQ35859.1;transl_table=11
GCA_005888185.1|LNKP01000128.1	Genbank	gene	1558	2286	.	-	.	ID=gene-AO053_10160;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=AO053_10160
GCA_005888185.1|LNKP01000128.1	Protein Homology	CDS	1558	2286	.	-	0	ID=cds-TMQ35860.1;Parent=gene-AO053_10160;Dbxref=NCBI_GP:TMQ35860.1;Name=TMQ35860.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658215.1;locus_tag=AO053_10160;product=molybdenum ABC transporter permease;protein_id=TMQ35860.1;transl_table=11
GCA_005888185.1|LNKP01000128.1	Genbank	gene	2421	3185	.	-	.	ID=gene-AO053_10165;Name=AO053_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10165
GCA_005888185.1|LNKP01000128.1	Protein Homology	CDS	2421	3185	.	-	0	ID=cds-TMQ35861.1;Parent=gene-AO053_10165;Dbxref=NCBI_GP:TMQ35861.1;Name=TMQ35861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688013.1;locus_tag=AO053_10165;product=molybdate-binding protein;protein_id=TMQ35861.1;transl_table=11
GCA_005888185.1|LNKP01000128.1	Genbank	gene	3323	4090	.	+	.	ID=gene-AO053_10170;Name=AO053_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10170
GCA_005888185.1|LNKP01000128.1	Protein Homology	CDS	3323	4090	.	+	0	ID=cds-TMQ35862.1;Parent=gene-AO053_10170;Dbxref=NCBI_GP:TMQ35862.1;Name=TMQ35862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658217.1;locus_tag=AO053_10170;product=molybdenum-dependent transcriptional regulator;protein_id=TMQ35862.1;transl_table=11
##sequence-region LNKP01000129.1 1 280
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000129.1	Genbank	region	1	280	.	+	.	ID=LNKP01000129.1:1..280;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
##sequence-region LNKP01000130.1 1 3638
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=725
GCA_005888185.1|LNKP01000130.1	Genbank	region	1	3638	.	+	.	ID=LNKP01000130.1:1..3638;Dbxref=taxon:725;biotype=aegyptius;collection-date=1984/1986;country=Brazil: Sao Paulo%2C Presidente Prudente;gbkey=Src;isolation-source=Blood from a Brazilian Purpuric Fever case;mol_type=genomic DNA;nat-host=Homo sapiens;serotype=NTHi;strain=F3283
GCA_005888185.1|LNKP01000130.1	Genbank	gene	1	3638	.	+	.	ID=gene-AO053_10175;Name=AO053_10175;end_range=3638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AO053_10175;partial=true;start_range=.,1
GCA_005888185.1|LNKP01000130.1	Protein Homology	CDS	1	3638	.	+	1	ID=cds-TMQ35849.1;Parent=gene-AO053_10175;Dbxref=NCBI_GP:TMQ35849.1;Name=TMQ35849.1;end_range=3638,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525732.1;locus_tag=AO053_10175;partial=true;product=hypothetical protein;protein_id=TMQ35849.1;start_range=.,1;transl_table=11
###