##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM1436v2
#!genome-build-accession NCBI_Assembly:GCA_000014365.2
##sequence-region CP000410.2 1 2046116
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=373153
CP000410.2	Genbank	region	1	2046116	.	+	.	ID=CP000410.2:1..2046116;Dbxref=taxon:373153;Is_circular=true;Name=ANONYMOUS;culture-collection=NCTC:7466;gbkey=Src;genome=chromosome;mol_type=genomic DNA;old-name=Streptococcus pneumoniae;strain=D39
CP000410.2	Genbank	gene	1	1362	.	+	.	ID=gene-SPD_0001;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SPD_0001
CP000410.2	Genbank	CDS	1	1362	.	+	0	ID=cds-ABJ54349.1;Parent=gene-SPD_0001;Dbxref=NCBI_GP:ABJ54349.1;Name=ABJ54349.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0001%3B equivalent gene in S.pneumoniae R6 %3D spr0001%3B identified by match to protein family HMM PF00308%3B match to protein family HMM TIGR00362;gbkey=CDS;gene=dnaA;locus_tag=SPD_0001;product=chromosomal replication initiator protein DnaA;protein_id=ABJ54349.1;transl_table=11
CP000410.2	Genbank	gene	1521	2657	.	+	.	ID=gene-SPD_0002;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SPD_0002
CP000410.2	Genbank	CDS	1521	2657	.	+	0	ID=cds-ABJ55235.1;Parent=gene-SPD_0002;Dbxref=NCBI_GP:ABJ55235.1;Name=ABJ55235.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0002%3B equivalent gene in S.pneumoniae R6 %3D spr0002%3B identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663;gbkey=CDS;gene=dnaN;locus_tag=SPD_0002;product=DNA polymerase III%2C beta subunit;protein_id=ABJ55235.1;transl_table=11
CP000410.2	Genbank	gene	2722	2916	.	+	.	ID=gene-SPD_0003;Name=SPD_0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0003
CP000410.2	Genbank	CDS	2722	2916	.	+	0	ID=cds-ABJ54146.1;Parent=gene-SPD_0003;Dbxref=NCBI_GP:ABJ54146.1;Name=ABJ54146.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0003%3B equivalent gene in S.pneumoniae R6 %3D spr0003%3B identified by match to protein family HMM PF06107;gbkey=CDS;locus_tag=SPD_0003;product=hypothetical protein;protein_id=ABJ54146.1;transl_table=11
CP000410.2	Genbank	gene	3000	4115	.	+	.	ID=gene-SPD_0004;Name=SPD_0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0004
CP000410.2	Genbank	CDS	3000	4115	.	+	0	ID=cds-ABJ54634.1;Parent=gene-SPD_0004;Dbxref=NCBI_GP:ABJ54634.1;Name=ABJ54634.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0004%3B equivalent gene in S.pneumoniae R6 %3D spr0004%3B identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092;gbkey=CDS;locus_tag=SPD_0004;product=GTP-binding protein;protein_id=ABJ54634.1;transl_table=11
CP000410.2	Genbank	gene	4186	4755	.	+	.	ID=gene-SPD_0005;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=SPD_0005
CP000410.2	Genbank	CDS	4186	4755	.	+	0	ID=cds-ABJ54027.1;Parent=gene-SPD_0005;Dbxref=NCBI_GP:ABJ54027.1;Name=ABJ54027.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0005%3B equivalent gene in S.pneumoniae R6 %3D spr0005%3B identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447;gbkey=CDS;gene=pth;locus_tag=SPD_0005;product=peptidyl-tRNA hydrolase;protein_id=ABJ54027.1;transl_table=11
CP000410.2	Genbank	gene	4756	8265	.	+	.	ID=gene-SPD_0006;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=SPD_0006
CP000410.2	Genbank	CDS	4756	8265	.	+	0	ID=cds-ABJ54447.1;Parent=gene-SPD_0006;Dbxref=NCBI_GP:ABJ54447.1;Name=ABJ54447.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0006%3B equivalent gene in S.pneumoniae R6 %3D spr0006%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00580;gbkey=CDS;gene=mfd;locus_tag=SPD_0006;product=transcription-repair coupling factor;protein_id=ABJ54447.1;transl_table=11
CP000410.2	Genbank	gene	8323	8589	.	+	.	ID=gene-SPD_0007;Name=SPD_0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0007
CP000410.2	Genbank	CDS	8323	8589	.	+	0	ID=cds-ABJ53838.1;Parent=gene-SPD_0007;Dbxref=NCBI_GP:ABJ53838.1;Name=ABJ53838.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0007%3B equivalent gene in S.pneumoniae R6 %3D spr0007%3B identified by match to protein family HMM PF01479;gbkey=CDS;locus_tag=SPD_0007;product=S4 domain protein;protein_id=ABJ53838.1;transl_table=11
CP000410.2	Genbank	gene	8582	8950	.	+	.	ID=gene-SPD_0008;Name=SPD_0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0008
CP000410.2	Genbank	CDS	8582	8950	.	+	0	ID=cds-ABJ54275.1;Parent=gene-SPD_0008;Dbxref=NCBI_GP:ABJ54275.1;Name=ABJ54275.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0008%3B equivalent gene in S.pneumoniae R6 %3D spr0008%3B identified by match to protein family HMM PF04977;gbkey=CDS;locus_tag=SPD_0008;product=septum formation initiator%2C putative;protein_id=ABJ54275.1;transl_table=11
CP000410.2	Genbank	gene	8955	9077	.	+	.	ID=gene-SPD_0009;Name=SPD_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0009
CP000410.2	Genbank	CDS	8955	9077	.	+	0	ID=cds-ABJ55136.1;Parent=gene-SPD_0009;Dbxref=NCBI_GP:ABJ55136.1;Name=ABJ55136.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0009;gbkey=CDS;locus_tag=SPD_0009;product=hypothetical protein;protein_id=ABJ55136.1;transl_table=11
CP000410.2	Genbank	gene	9070	10338	.	+	.	ID=gene-SPD_0010;Name=SPD_0010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0010
CP000410.2	Genbank	CDS	9070	10338	.	+	0	ID=cds-ABJ54249.1;Parent=gene-SPD_0010;Dbxref=NCBI_GP:ABJ54249.1;Name=ABJ54249.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0010%3B equivalent gene in S.pneumoniae R6 %3D spr0009;gbkey=CDS;locus_tag=SPD_0010;product=hypothetical protein;protein_id=ABJ54249.1;transl_table=11
CP000410.2	Genbank	gene	10335	11612	.	+	.	ID=gene-SPD_0011;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=SPD_0011
CP000410.2	Genbank	CDS	10335	11612	.	+	0	ID=cds-ABJ55077.1;Parent=gene-SPD_0011;Dbxref=NCBI_GP:ABJ55077.1;Name=ABJ55077.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0011%3B equivalent gene in S.pneumoniae R6 %3D spr0010%3B identified by match to protein family HMM PF01171%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433;gbkey=CDS;gene=tilS;locus_tag=SPD_0011;product=tRNA(Ile)-lysidine synthetase;protein_id=ABJ55077.1;transl_table=11
CP000410.2	Genbank	gene	11616	12158	.	+	.	ID=gene-SPD_0012;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=SPD_0012
CP000410.2	Genbank	CDS	11616	12158	.	+	0	ID=cds-ABJ54977.1;Parent=gene-SPD_0012;Dbxref=NCBI_GP:ABJ54977.1;Name=ABJ54977.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0012%3B equivalent gene in S.pneumoniae R6 %3D spr0011%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203;gbkey=CDS;gene=hpt;locus_tag=SPD_0012;product=hypoxanthine phosphoribosyltransferase;protein_id=ABJ54977.1;transl_table=11
CP000410.2	Genbank	gene	12174	14132	.	+	.	ID=gene-SPD_0013;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=SPD_0013
CP000410.2	Genbank	CDS	12174	14132	.	+	0	ID=cds-ABJ53883.1;Parent=gene-SPD_0013;Dbxref=NCBI_GP:ABJ53883.1;Name=ABJ53883.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0013%3B equivalent gene in S.pneumoniae R6 %3D spr0012%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM TIGR01241;gbkey=CDS;gene=ftsH;locus_tag=SPD_0013;product=cell division protein FtsH;protein_id=ABJ53883.1;transl_table=11
CP000410.2	Genbank	gene	14254	14733	.	+	.	ID=gene-SPD_0014;Name=comX1;gbkey=Gene;gene=comX1;gene_biotype=protein_coding;locus_tag=SPD_0014
CP000410.2	Genbank	CDS	14254	14733	.	+	0	ID=cds-ABJ53632.1;Parent=gene-SPD_0014;Dbxref=NCBI_GP:ABJ53632.1;Name=ABJ53632.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0014%3B equivalent gene in S.pneumoniae R6 %3D spr0013;gbkey=CDS;gene=comX1;locus_tag=SPD_0014;product=transcriptional regulator ComX1;protein_id=ABJ53632.1;transl_table=11
CP000410.2	Genbank	gene	14827	14898	.	+	.	ID=gene-SPD_0015;Name=SPD_0015;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0015
CP000410.2	Genbank	tRNA	14827	14898	.	+	.	ID=rna-SPD_0015;Parent=gene-SPD_0015;gbkey=tRNA;locus_tag=SPD_0015;product=tRNA-Glu
CP000410.2	Genbank	exon	14827	14898	.	+	.	ID=exon-SPD_0015-1;Parent=rna-SPD_0015;gbkey=tRNA;locus_tag=SPD_0015;product=tRNA-Glu
CP000410.2	Genbank	gene	15164	16621	.	+	.	ID=gene-SPD_0016;Name=rrsA;gbkey=Gene;gene=rrsA;gene_biotype=rRNA;locus_tag=SPD_0016
CP000410.2	Genbank	rRNA	15164	16621	.	+	.	ID=rna-SPD_0016;Parent=gene-SPD_0016;gbkey=rRNA;gene=rrsA;locus_tag=SPD_0016;product=16S ribosomal RNA
CP000410.2	Genbank	exon	15164	16621	.	+	.	ID=exon-SPD_0016-1;Parent=rna-SPD_0016;gbkey=rRNA;gene=rrsA;locus_tag=SPD_0016;product=16S ribosomal RNA
CP000410.2	Genbank	gene	16748	16820	.	+	.	ID=gene-SPD_0017;Name=SPD_0017;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0017
CP000410.2	Genbank	tRNA	16748	16820	.	+	.	ID=rna-SPD_0017;Parent=gene-SPD_0017;gbkey=tRNA;locus_tag=SPD_0017;product=tRNA-Ala
CP000410.2	Genbank	exon	16748	16820	.	+	.	ID=exon-SPD_0017-1;Parent=rna-SPD_0017;gbkey=tRNA;locus_tag=SPD_0017;product=tRNA-Ala
CP000410.2	Genbank	gene	16945	19846	.	+	.	ID=gene-SPD_0018;Name=rrlA;gbkey=Gene;gene=rrlA;gene_biotype=rRNA;locus_tag=SPD_0018
CP000410.2	Genbank	rRNA	16945	19846	.	+	.	ID=rna-SPD_0018;Parent=gene-SPD_0018;gbkey=rRNA;gene=rrlA;locus_tag=SPD_0018;product=23S ribosomal RNA
CP000410.2	Genbank	exon	16945	19846	.	+	.	ID=exon-SPD_0018-1;Parent=rna-SPD_0018;gbkey=rRNA;gene=rrlA;locus_tag=SPD_0018;product=23S ribosomal RNA
CP000410.2	Genbank	gene	19923	20038	.	+	.	ID=gene-SPD_0019;Name=rrfA;gbkey=Gene;gene=rrfA;gene_biotype=rRNA;locus_tag=SPD_0019
CP000410.2	Genbank	rRNA	19923	20038	.	+	.	ID=rna-SPD_0019;Parent=gene-SPD_0019;gbkey=rRNA;gene=rrfA;locus_tag=SPD_0019;product=5S ribosomal RNA
CP000410.2	Genbank	exon	19923	20038	.	+	.	ID=exon-SPD_0019-1;Parent=rna-SPD_0019;gbkey=rRNA;gene=rrfA;locus_tag=SPD_0019;product=5S ribosomal RNA
CP000410.2	Genbank	gene	20044	20117	.	+	.	ID=gene-SPD_0020;Name=SPD_0020;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0020
CP000410.2	Genbank	tRNA	20044	20117	.	+	.	ID=rna-SPD_0020;Parent=gene-SPD_0020;gbkey=tRNA;locus_tag=SPD_0020;product=tRNA-Asn
CP000410.2	Genbank	exon	20044	20117	.	+	.	ID=exon-SPD_0020-1;Parent=rna-SPD_0020;gbkey=tRNA;locus_tag=SPD_0020;product=tRNA-Asn
CP000410.2	Genbank	pseudogene	20225	20554	.	+	.	ID=gene-SPD_0021;Name=SPD_0021;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0299%3B equivalent gene in S.pneumoniae R6 %3D spr0014%3B truncated IS630-Spn1%2C transposase Orf1 identified by match to protein family HMM PF01710%3B authentic frameshift mutation that leads to truncation after amino acid 109;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0021;pseudo=true
CP000410.2	Genbank	pseudogene	21106	21851	.	-	.	ID=gene-SPD_0022;Name=SPD_0022;Note=equivalent gene in S.pneumoniae R6 %3D spr0019%3B IS1167%2C transposase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0022;pseudo=true
CP000410.2	Genbank	gene	22168	22404	.	+	.	ID=gene-SPD_0023;Name=SPD_0023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0023
CP000410.2	Genbank	CDS	22168	22404	.	+	0	ID=cds-ABJ54252.1;Parent=gene-SPD_0023;Dbxref=NCBI_GP:ABJ54252.1;Name=ABJ54252.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0018%3B equivalent gene in S.pneumoniae R6 %3D spr0020;gbkey=CDS;locus_tag=SPD_0023;product=hypothetical protein;protein_id=ABJ54252.1;transl_table=11
CP000410.2	Genbank	gene	22635	23921	.	+	.	ID=gene-SPD_0024;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=SPD_0024
CP000410.2	Genbank	CDS	22635	23921	.	+	0	ID=cds-ABJ54068.1;Parent=gene-SPD_0024;Dbxref=NCBI_GP:ABJ54068.1;Name=ABJ54068.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0019%3B equivalent gene in S.pneumoniae R6 %3D spr0021%3B identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184;gbkey=CDS;gene=purA;locus_tag=SPD_0024;product=adenylosuccinate synthetase;protein_id=ABJ54068.1;transl_table=11
CP000410.2	Genbank	gene	24122	24589	.	+	.	ID=gene-SPD_0025;Name=SPD_0025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0025
CP000410.2	Genbank	CDS	24122	24589	.	+	0	ID=cds-ABJ54916.1;Parent=gene-SPD_0025;Dbxref=NCBI_GP:ABJ54916.1;Name=ABJ54916.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0020%3B equivalent gene in S.pneumoniae R6 %3D spr0022%3B identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=SPD_0025;product=cytidine/deoxycytidylate deaminase family protein;protein_id=ABJ54916.1;transl_table=11
CP000410.2	Genbank	gene	24631	24815	.	+	.	ID=gene-SPD_0026;Name=scRNA;gbkey=Gene;gene=scRNA;gene_biotype=ncRNA;locus_tag=SPD_0026
CP000410.2	Genbank	ncRNA	24631	24815	.	+	.	ID=rna-SPD_0026;Parent=gene-SPD_0026;gbkey=ncRNA;gene=scRNA;locus_tag=SPD_0026;product=Protein and peptide secretion
CP000410.2	Genbank	exon	24631	24815	.	+	.	ID=exon-SPD_0026-1;Parent=rna-SPD_0026;gbkey=ncRNA;gene=scRNA;locus_tag=SPD_0026;product=Protein and peptide secretion
CP000410.2	Genbank	gene	24776	25219	.	+	.	ID=gene-SPD_0027;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=SPD_0027
CP000410.2	Genbank	CDS	24776	25219	.	+	0	ID=cds-ABJ54226.1;Parent=gene-SPD_0027;Dbxref=NCBI_GP:ABJ54226.1;Name=ABJ54226.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0021%3B equivalent gene in S.pneumoniae R6 %3D spr0023%3B identified by match to protein family HMM PF00692;gbkey=CDS;gene=dut;locus_tag=SPD_0027;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=ABJ54226.1;transl_table=11
CP000410.2	Genbank	gene	25179	25736	.	+	.	ID=gene-SPD_0028;Name=SPD_0028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0028
CP000410.2	Genbank	CDS	25179	25736	.	+	0	ID=cds-ABJ55155.1;Parent=gene-SPD_0028;Dbxref=NCBI_GP:ABJ55155.1;Name=ABJ55155.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0022%3B equivalent gene in S.pneumoniae R6 %3D spr0024%3B identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=SPD_0028;product=phosphoglycerate mutase family protein;protein_id=ABJ55155.1;transl_table=11
CP000410.2	Genbank	gene	25849	27111	.	+	.	ID=gene-SPD_0029;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=SPD_0029
CP000410.2	Genbank	CDS	25849	27111	.	+	0	ID=cds-ABJ54539.1;Parent=gene-SPD_0029;Dbxref=NCBI_GP:ABJ54539.1;Name=ABJ54539.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0025%3B identified by match to protein family HMM TIGR00416;gbkey=CDS;gene=radA;locus_tag=SPD_0029;product=DNA repair protein RadA;protein_id=ABJ54539.1;transl_table=11
CP000410.2	Genbank	gene	27184	27681	.	+	.	ID=gene-SPD_0030;Name=SPD_0030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0030
CP000410.2	Genbank	CDS	27184	27681	.	+	0	ID=cds-ABJ53758.1;Parent=gene-SPD_0030;Dbxref=NCBI_GP:ABJ53758.1;Name=ABJ53758.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0024%3B equivalent gene in S.pneumoniae R6 %3D spr0026%3B identified by match to protein family HMM PF00484;gbkey=CDS;locus_tag=SPD_0030;product=hypothetical protein;protein_id=ABJ53758.1;transl_table=11
CP000410.2	Genbank	gene	27706	28365	.	+	.	ID=gene-SPD_0031;Name=SPD_0031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0031
CP000410.2	Genbank	CDS	27706	28365	.	+	0	ID=cds-ABJ54591.1;Parent=gene-SPD_0031;Dbxref=NCBI_GP:ABJ54591.1;Name=ABJ54591.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0026%3B equivalent gene in S.pneumoniae R6 %3D spr0027;gbkey=CDS;locus_tag=SPD_0031;product=membrane protein%2C putative;protein_id=ABJ54591.1;transl_table=11
CP000410.2	Genbank	gene	28358	28489	.	+	.	ID=gene-SPD_0032;Name=SPD_0032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0032
CP000410.2	Genbank	CDS	28358	28489	.	+	0	ID=cds-ABJ54085.1;Parent=gene-SPD_0032;Dbxref=NCBI_GP:ABJ54085.1;Name=ABJ54085.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0026;gbkey=CDS;locus_tag=SPD_0032;product=hypothetical protein;protein_id=ABJ54085.1;transl_table=11
CP000410.2	Genbank	gene	28634	29602	.	+	.	ID=gene-SPD_0033;Name=prsA;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=SPD_0033
CP000410.2	Genbank	CDS	28634	29602	.	+	0	ID=cds-ABJ54905.1;Parent=gene-SPD_0033;Dbxref=NCBI_GP:ABJ54905.1;Name=ABJ54905.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0027%3B equivalent gene in S.pneumoniae R6 %3D spr0028%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;gene=prsA;locus_tag=SPD_0033;product=ribose-phosphate pyrophosphokinase;protein_id=ABJ54905.1;transl_table=11
CP000410.2	Genbank	pseudogene	29624	30016	.	-	.	ID=gene-SPD_0034;Name=SPD_0034;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0028%3B equivalent gene in S.pneumoniae R6 %3D spr0029%3B IS1167%2C transposase%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0034;pseudo=true
CP000410.2	Genbank	gene	30143	30376	.	-	.	ID=gene-SPD_0035;Name=SPD_0035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0035
CP000410.2	Genbank	CDS	30143	30376	.	-	0	ID=cds-ABJ55114.1;Parent=gene-SPD_0035;Dbxref=NCBI_GP:ABJ55114.1;Name=ABJ55114.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0029%3B equivalent gene in S.pneumoniae R6 %3D spr0030;gbkey=CDS;locus_tag=SPD_0035;product=hypothetical protein;protein_id=ABJ55114.1;transl_table=11
CP000410.2	Genbank	gene	30369	30485	.	-	.	ID=gene-SPD_0036;Name=SPD_0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0036
CP000410.2	Genbank	CDS	30369	30485	.	-	0	ID=cds-ABJ54483.1;Parent=gene-SPD_0036;Dbxref=NCBI_GP:ABJ54483.1;Name=ABJ54483.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_0036;product=hypothetical protein;protein_id=ABJ54483.1;transl_table=11
CP000410.2	Genbank	gene	30700	31053	.	-	.	ID=gene-SPD_0037;Name=SPD_0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0037
CP000410.2	Genbank	CDS	30700	31053	.	-	0	ID=cds-ABJ55297.1;Parent=gene-SPD_0037;Dbxref=NCBI_GP:ABJ55297.1;Name=ABJ55297.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0031%3B equivalent gene in S.pneumoniae R6 %3D spr0031;gbkey=CDS;locus_tag=SPD_0037;product=hypothetical protein;protein_id=ABJ55297.1;transl_table=11
CP000410.2	Genbank	gene	31306	33939	.	+	.	ID=gene-SPD_0038;Name=SPD_0038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0038
CP000410.2	Genbank	CDS	31306	33939	.	+	0	ID=cds-ABJ54950.1;Parent=gene-SPD_0038;Dbxref=NCBI_GP:ABJ54950.1;Name=ABJ54950.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0032%3B equivalent gene in S.pneumoniae R6 %3D spr0032%3B identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593;gbkey=CDS;locus_tag=SPD_0038;product=DNA polymerase I;protein_id=ABJ54950.1;transl_table=11
CP000410.2	Genbank	gene	34024	34461	.	+	.	ID=gene-SPD_0039;Name=SPD_0039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0039
CP000410.2	Genbank	CDS	34024	34461	.	+	0	ID=cds-ABJ53611.1;Parent=gene-SPD_0039;Dbxref=NCBI_GP:ABJ53611.1;Name=ABJ53611.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0033%3B equivalent gene in S.pneumoniae R6 %3D spr0033%3B identified by match to protein family HMM PF02629;gbkey=CDS;locus_tag=SPD_0039;product=hypothetical protein;protein_id=ABJ53611.1;transl_table=11
CP000410.2	Genbank	gene	34652	35662	.	-	.	ID=gene-SPD_0040;Name=SPD_0040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0040
CP000410.2	Genbank	CDS	34652	35662	.	-	0	ID=cds-ABJ54787.1;Parent=gene-SPD_0040;Dbxref=NCBI_GP:ABJ54787.1;Name=ABJ54787.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0034%3B equivalent gene in S.pneumoniae R6 %3D spr0034%3B identified by match to protein family HMM PF03601;gbkey=CDS;locus_tag=SPD_0040;product=membrane protein%2C putative;protein_id=ABJ54787.1;transl_table=11
CP000410.2	Genbank	gene	35811	36980	.	+	.	ID=gene-SPD_0041;Name=araT;gbkey=Gene;gene=araT;gene_biotype=protein_coding;locus_tag=SPD_0041
CP000410.2	Genbank	CDS	35811	36980	.	+	0	ID=cds-ABJ54435.1;Parent=gene-SPD_0041;Dbxref=NCBI_GP:ABJ54435.1;Name=ABJ54435.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0035%3B equivalent gene in S.pneumoniae R6 %3D spr0035%3B identified by match to protein family HMM PF00155;gbkey=CDS;gene=araT;locus_tag=SPD_0041;product=aromatic amino acid aminotransferase;protein_id=ABJ54435.1;transl_table=11
CP000410.2	Genbank	gene	36977	37747	.	+	.	ID=gene-SPD_0042;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SPD_0042
CP000410.2	Genbank	CDS	36977	37747	.	+	0	ID=cds-ABJ55486.1;Parent=gene-SPD_0042;Dbxref=NCBI_GP:ABJ55486.1;Name=ABJ55486.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0036%3B equivalent gene in S.pneumoniae R6 %3D spr0036%3B identified by match to protein family HMM PF02565%3B match to protein family HMM TIGR00613;gbkey=CDS;gene=recO;locus_tag=SPD_0042;product=DNA repair protein RecO;protein_id=ABJ55486.1;transl_table=11
CP000410.2	Genbank	gene	37744	38736	.	+	.	ID=gene-SPD_0043;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=SPD_0043
CP000410.2	Genbank	CDS	37744	38736	.	+	0	ID=cds-ABJ54211.1;Parent=gene-SPD_0043;Dbxref=NCBI_GP:ABJ54211.1;Name=ABJ54211.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0037%3B equivalent gene in S.pneumoniae R6 %3D spr0037%3B identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182;gbkey=CDS;gene=plsX;locus_tag=SPD_0043;product=fatty acid/phospholipid synthesis protein PlsX;protein_id=ABJ54211.1;transl_table=11
CP000410.2	Genbank	gene	38742	38975	.	+	.	ID=gene-SPD_0044;Name=SPD_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0044
CP000410.2	Genbank	CDS	38742	38975	.	+	0	ID=cds-ABJ53901.1;Parent=gene-SPD_0044;Dbxref=NCBI_GP:ABJ53901.1;Name=ABJ53901.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0038%3B equivalent gene in S.pneumoniae R6 %3D spr0038;gbkey=CDS;locus_tag=SPD_0044;product=acyl carrier protein%2C putative;protein_id=ABJ53901.1;transl_table=11
CP000410.2	Genbank	pseudogene	39018	39311	.	+	.	ID=gene-SPD_0045;Name=SPD_0045;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0039%3B equivalent gene in S.pneumoniae R6 %3D spr0039%3B IS1381%2C transposase OrfB%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0045;pseudo=true
CP000410.2	Genbank	gene	39514	39744	.	+	.	ID=gene-SPD_0046;Name=blpU;gbkey=Gene;gene=blpU;gene_biotype=protein_coding;locus_tag=SPD_0046
CP000410.2	Genbank	CDS	39514	39744	.	+	0	ID=cds-ABJ55193.1;Parent=gene-SPD_0046;Dbxref=NCBI_GP:ABJ55193.1;Name=ABJ55193.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0041%3B equivalent gene in S.pneumoniae R6 %3D spr0040%3B identified by match to protein family HMM TIGR01847;gbkey=CDS;gene=blpU;locus_tag=SPD_0046;product=bacteriocin BlpU;protein_id=ABJ55193.1;transl_table=11
CP000410.2	Genbank	gene	39747	39872	.	+	.	ID=gene-SPD_0047;Name=SPD_0047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0047
CP000410.2	Genbank	CDS	39747	39872	.	+	0	ID=cds-ABJ54100.1;Parent=gene-SPD_0047;Dbxref=NCBI_GP:ABJ54100.1;Name=ABJ54100.1;gbkey=CDS;locus_tag=SPD_0047;product=hypothetical protein;protein_id=ABJ54100.1;transl_table=11
CP000410.2	Genbank	pseudogene	40224	41500	.	-	.	ID=gene-SPD_0048;Name=SPD_0048;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1262%3B equivalent gene in S.pneumoniae R6 %3D spr0042%3B IS1167%2C transposase%2C interruption;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0048;pseudo=true
CP000410.2	Genbank	gene	41902	44055	.	+	.	ID=gene-SPD_0049;Name=comA;gbkey=Gene;gene=comA;gene_biotype=protein_coding;locus_tag=SPD_0049
CP000410.2	Genbank	CDS	41902	44055	.	+	0	ID=cds-ABJ54806.1;Parent=gene-SPD_0049;Dbxref=NCBI_GP:ABJ54806.1;Name=ABJ54806.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0042%3B equivalent gene in S.pneumoniae R6 %3D spr0043%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412%3B match to protein family HMM TIGR01193;gbkey=CDS;gene=comA;locus_tag=SPD_0049;product=competence factor transporting ATP-binding/permease protein ComA;protein_id=ABJ54806.1;transl_table=11
CP000410.2	Genbank	gene	44068	45417	.	+	.	ID=gene-SPD_0050;Name=comB;gbkey=Gene;gene=comB;gene_biotype=protein_coding;locus_tag=SPD_0050
CP000410.2	Genbank	CDS	44068	45417	.	+	0	ID=cds-ABJ53997.1;Parent=gene-SPD_0050;Dbxref=NCBI_GP:ABJ53997.1;Name=ABJ53997.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0043%3B equivalent gene in S.pneumoniae R6 %3D spr0044%3B identified by match to protein family HMM TIGR01000;gbkey=CDS;gene=comB;locus_tag=SPD_0050;product=competence factor transport protein ComB;protein_id=ABJ53997.1;transl_table=11
CP000410.2	Genbank	gene	45587	46294	.	+	.	ID=gene-SPD_0051;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=SPD_0051
CP000410.2	Genbank	CDS	45587	46294	.	+	0	ID=cds-ABJ54486.1;Parent=gene-SPD_0051;Dbxref=NCBI_GP:ABJ54486.1;Name=ABJ54486.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0044%3B equivalent gene in S.pneumoniae R6 %3D spr0045%3B identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081;gbkey=CDS;gene=purC;locus_tag=SPD_0051;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=ABJ54486.1;transl_table=11
CP000410.2	Genbank	gene	46496	50221	.	+	.	ID=gene-SPD_0052;Name=SPD_0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0052
CP000410.2	Genbank	CDS	46496	50221	.	+	0	ID=cds-ABJ54799.1;Parent=gene-SPD_0052;Dbxref=NCBI_GP:ABJ54799.1;Name=ABJ54799.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0045%3B equivalent gene in S.pneumoniae R6 %3D spr0046%3B identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01857;gbkey=CDS;locus_tag=SPD_0052;product=phosphoribosylformylglycinamidine synthase%2C putative;protein_id=ABJ54799.1;transl_table=11
CP000410.2	Genbank	gene	50314	51756	.	+	.	ID=gene-SPD_0053;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=SPD_0053
CP000410.2	Genbank	CDS	50314	51756	.	+	0	ID=cds-ABJ54240.1;Parent=gene-SPD_0053;Dbxref=NCBI_GP:ABJ54240.1;Name=ABJ54240.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0046%3B equivalent gene in S.pneumoniae R6 %3D spr0047%3B identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134;gbkey=CDS;gene=purF;locus_tag=SPD_0053;product=amidophosphoribosyltransferase;protein_id=ABJ54240.1;transl_table=11
CP000410.2	Genbank	gene	51793	52815	.	+	.	ID=gene-SPD_0054;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=SPD_0054
CP000410.2	Genbank	CDS	51793	52815	.	+	0	ID=cds-ABJ54031.1;Parent=gene-SPD_0054;Dbxref=NCBI_GP:ABJ54031.1;Name=ABJ54031.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0047%3B equivalent gene in S.pneumoniae R6 %3D spr0048%3B identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878;gbkey=CDS;gene=purM;locus_tag=SPD_0054;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=ABJ54031.1;transl_table=11
CP000410.2	Genbank	gene	52812	53357	.	+	.	ID=gene-SPD_0055;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SPD_0055
CP000410.2	Genbank	CDS	52812	53357	.	+	0	ID=cds-ABJ54098.1;Parent=gene-SPD_0055;Dbxref=NCBI_GP:ABJ54098.1;Name=ABJ54098.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0048%3B equivalent gene in S.pneumoniae R6 %3D spr0049%3B identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639;gbkey=CDS;gene=purN;locus_tag=SPD_0055;product=phosphoribosylglycinamide formyltransferase;protein_id=ABJ54098.1;transl_table=11
CP000410.2	Genbank	gene	53441	53950	.	+	.	ID=gene-SPD_0056;Name=SPD_0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0056
CP000410.2	Genbank	CDS	53441	53950	.	+	0	ID=cds-ABJ55186.1;Parent=gene-SPD_0056;Dbxref=NCBI_GP:ABJ55186.1;Name=ABJ55186.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0049%3B equivalent gene in S.pneumoniae R6 %3D spr0050%3B identified by match to protein family HMM PF04892;gbkey=CDS;locus_tag=SPD_0056;product=vanZ protein%2C putative;protein_id=ABJ55186.1;transl_table=11
CP000410.2	Genbank	gene	53975	55522	.	+	.	ID=gene-SPD_0057;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=SPD_0057
CP000410.2	Genbank	CDS	53975	55522	.	+	0	ID=cds-ABJ54358.1;Parent=gene-SPD_0057;Dbxref=NCBI_GP:ABJ54358.1;Name=ABJ54358.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0050%3B equivalent gene in S.pneumoniae R6 %3D spr0051%3B identified by match to protein family HMM PF01808%3B match to protein family HMM PF02142%3B match to protein family HMM TIGR00355;gbkey=CDS;gene=purH;locus_tag=SPD_0057;product=bifunctional purine biosynthesis protein PurH;protein_id=ABJ54358.1;transl_table=11
CP000410.2	Genbank	gene	55644	56906	.	+	.	ID=gene-SPD_0058;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=SPD_0058
CP000410.2	Genbank	CDS	55644	56906	.	+	0	ID=cds-ABJ55428.1;Parent=gene-SPD_0058;Dbxref=NCBI_GP:ABJ55428.1;Name=ABJ55428.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0051%3B equivalent gene in S.pneumoniae R6 %3D spr0052%3B identified by match to protein family HMM PF01071%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877;gbkey=CDS;gene=purD;locus_tag=SPD_0058;product=phosphoribosylamine--glycine ligase;protein_id=ABJ55428.1;transl_table=11
CP000410.2	Genbank	gene	57309	57797	.	+	.	ID=gene-SPD_0059;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SPD_0059
CP000410.2	Genbank	CDS	57309	57797	.	+	0	ID=cds-ABJ54072.1;Parent=gene-SPD_0059;Dbxref=NCBI_GP:ABJ54072.1;Name=ABJ54072.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0053%3B equivalent gene in S.pneumoniae R6 %3D spr0053%3B identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162;gbkey=CDS;gene=purE;locus_tag=SPD_0059;product=phosphoribosylaminoimidazole carboxylase%2C catalytic subunit;protein_id=ABJ54072.1;transl_table=11
CP000410.2	Genbank	gene	57784	58875	.	+	.	ID=gene-SPD_0060;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=SPD_0060
CP000410.2	Genbank	CDS	57784	58875	.	+	0	ID=cds-ABJ54688.1;Parent=gene-SPD_0060;Dbxref=NCBI_GP:ABJ54688.1;Name=ABJ54688.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0054%3B equivalent gene in S.pneumoniae R6 %3D spr0054%3B identified by match to protein family HMM PF02222%3B match to protein family HMM TIGR01161;gbkey=CDS;gene=purK;locus_tag=SPD_0060;product=phosphoribosylaminoimidazole carboxylase%2C ATPase subunit;protein_id=ABJ54688.1;transl_table=11
CP000410.2	Genbank	gene	58885	59112	.	+	.	ID=gene-SPD_0061;Name=SPD_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0061
CP000410.2	Genbank	CDS	58885	59112	.	+	0	ID=cds-ABJ55244.1;Parent=gene-SPD_0061;Dbxref=NCBI_GP:ABJ55244.1;Name=ABJ55244.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0055%3B equivalent gene in S.pneumoniae R6 %3D spr0055;gbkey=CDS;locus_tag=SPD_0061;product=hypothetical protein;protein_id=ABJ55244.1;transl_table=11
CP000410.2	Genbank	gene	59175	60473	.	+	.	ID=gene-SPD_0062;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=SPD_0062
CP000410.2	Genbank	CDS	59175	60473	.	+	0	ID=cds-ABJ54919.1;Parent=gene-SPD_0062;Dbxref=NCBI_GP:ABJ54919.1;Name=ABJ54919.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0056%3B equivalent gene in S.pneumoniae R6 %3D spr0056%3B identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928;gbkey=CDS;gene=purB;locus_tag=SPD_0062;product=adenylosuccinate lyase;protein_id=ABJ54919.1;transl_table=11
CP000410.2	Genbank	gene	60528	64466	.	-	.	ID=gene-SPD_0063;Name=strH;gbkey=Gene;gene=strH;gene_biotype=protein_coding;locus_tag=SPD_0063
CP000410.2	Genbank	CDS	60528	64466	.	-	0	ID=cds-ABJ55338.1;Parent=gene-SPD_0063;Dbxref=NCBI_GP:ABJ55338.1;Name=ABJ55338.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0057%3B equivalent gene in S.pneumoniae R6 %3D spr0057%3B identified by match to protein family HMM PF00728%3B match to protein family HMM PF00746%3B match to protein family HMM PF04650%3B match to protein family HMM PF07501%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168;gbkey=CDS;gene=strH;locus_tag=SPD_0063;product=beta-N-acetylhexosaminidase;protein_id=ABJ55338.1;transl_table=11
CP000410.2	Genbank	gene	64781	65524	.	-	.	ID=gene-SPD_0064;Name=SPD_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0064
CP000410.2	Genbank	CDS	64781	65524	.	-	0	ID=cds-ABJ54247.1;Parent=gene-SPD_0064;Dbxref=NCBI_GP:ABJ54247.1;Name=ABJ54247.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0058%3B equivalent gene in S.pneumoniae R6 %3D spr0058%3B identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702;gbkey=CDS;locus_tag=SPD_0064;product=transcriptional regulator%2C GntR family protein;protein_id=ABJ54247.1;transl_table=11
CP000410.2	Genbank	gene	65845	67632	.	+	.	ID=gene-SPD_0065;Name=bgaC;gbkey=Gene;gene=bgaC;gene_biotype=protein_coding;locus_tag=SPD_0065
CP000410.2	Genbank	CDS	65845	67632	.	+	0	ID=cds-ABJ55509.1;Parent=gene-SPD_0065;Dbxref=NCBI_GP:ABJ55509.1;Name=ABJ55509.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0060%3B equivalent gene in S.pneumoniae R6 %3D spr0059%3B identified by match to protein family HMM PF01301%3B match to protein family HMM PF02449;gbkey=CDS;gene=bgaC;locus_tag=SPD_0065;product=Beta-galactosidase 3;protein_id=ABJ55509.1;transl_table=11
CP000410.2	Genbank	gene	67629	68105	.	+	.	ID=gene-SPD_0066;Name=SPD_0066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0066
CP000410.2	Genbank	CDS	67629	68105	.	+	0	ID=cds-ABJ54445.1;Parent=gene-SPD_0066;Dbxref=NCBI_GP:ABJ54445.1;Name=ABJ54445.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0061%3B equivalent gene in S.pneumoniae R6 %3D spr0060%3B identified by match to protein family HMM PF03830;gbkey=CDS;locus_tag=SPD_0066;product=PTS system%2C IIB component;protein_id=ABJ54445.1;transl_table=11
CP000410.2	Genbank	gene	68133	69038	.	+	.	ID=gene-SPD_0067;Name=SPD_0067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0067
CP000410.2	Genbank	CDS	68133	69038	.	+	0	ID=cds-ABJ53902.1;Parent=gene-SPD_0067;Dbxref=NCBI_GP:ABJ53902.1;Name=ABJ53902.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0062%3B equivalent gene in S.pneumoniae R6 %3D spr0061%3B identified by match to protein family HMM PF03609;gbkey=CDS;locus_tag=SPD_0067;product=PTS system%2C IIC component;protein_id=ABJ53902.1;transl_table=11
CP000410.2	Genbank	gene	69025	69840	.	+	.	ID=gene-SPD_0068;Name=SPD_0068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0068
CP000410.2	Genbank	CDS	69025	69840	.	+	0	ID=cds-ABJ53621.1;Parent=gene-SPD_0068;Dbxref=NCBI_GP:ABJ53621.1;Name=ABJ53621.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0063%3B equivalent gene in S.pneumoniae R6 %3D spr0062%3B identified by match to protein family HMM PF03613;gbkey=CDS;locus_tag=SPD_0068;product=PTS system%2C IID component;protein_id=ABJ53621.1;transl_table=11
CP000410.2	Genbank	gene	69847	70251	.	+	.	ID=gene-SPD_0069;Name=SPD_0069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0069
CP000410.2	Genbank	CDS	69847	70251	.	+	0	ID=cds-ABJ54691.1;Parent=gene-SPD_0069;Dbxref=NCBI_GP:ABJ54691.1;Name=ABJ54691.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0064%3B equivalent gene in S.pneumoniae R6 %3D spr0063%3B identified by match to protein family HMM PF03610;gbkey=CDS;locus_tag=SPD_0069;product=PTS system%2C IIA component;protein_id=ABJ54691.1;transl_table=11
CP000410.2	Genbank	gene	70550	71716	.	+	.	ID=gene-SPD_0070;Name=agaS;gbkey=Gene;gene=agaS;gene_biotype=protein_coding;locus_tag=SPD_0070
CP000410.2	Genbank	CDS	70550	71716	.	+	0	ID=cds-ABJ53808.1;Parent=gene-SPD_0070;Dbxref=NCBI_GP:ABJ53808.1;Name=ABJ53808.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0065%3B equivalent gene in S.pneumoniae R6 %3D spr0064%3B identified by match to protein family HMM PF01380;gbkey=CDS;gene=agaS;locus_tag=SPD_0070;product=sugar isomerase domain protein AgaS;protein_id=ABJ53808.1;transl_table=11
CP000410.2	Genbank	gene	71832	72869	.	+	.	ID=gene-SPD_0071;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=SPD_0071
CP000410.2	Genbank	CDS	71832	72869	.	+	0	ID=cds-ABJ55471.1;Parent=gene-SPD_0071;Dbxref=NCBI_GP:ABJ55471.1;Name=ABJ55471.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0066%3B equivalent gene in S.pneumoniae R6 %3D spr0065%3B identified by match to protein family HMM PF01263;gbkey=CDS;gene=galM;locus_tag=SPD_0071;product=aldose 1-epimerase;protein_id=ABJ55471.1;transl_table=11
CP000410.2	Genbank	gene	73076	73930	.	+	.	ID=gene-SPD_0072;Name=SPD_0072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0072
CP000410.2	Genbank	CDS	73076	73930	.	+	0	ID=cds-ABJ55411.1;Parent=gene-SPD_0072;Dbxref=NCBI_GP:ABJ55411.1;Name=ABJ55411.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0066%3B identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=SPD_0072;product=glyoxalase family protein;protein_id=ABJ55411.1;transl_table=11
CP000410.2	Genbank	gene	74080	74337	.	+	.	ID=gene-SPD_0073;Name=SPD_0073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0073
CP000410.2	Genbank	CDS	74080	74337	.	+	0	ID=cds-ABJ54131.1;Parent=gene-SPD_0073;Dbxref=NCBI_GP:ABJ54131.1;Name=ABJ54131.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0067%3B identified by match to protein family HMM PF02583;gbkey=CDS;locus_tag=SPD_0073;product=hypothetical protein;protein_id=ABJ54131.1;transl_table=11
CP000410.2	Genbank	gene	75312	76076	.	+	.	ID=gene-SPD_0074;Name=SPD_0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0074
CP000410.2	Genbank	CDS	75312	76076	.	+	0	ID=cds-ABJ54860.1;Parent=gene-SPD_0074;Dbxref=NCBI_GP:ABJ54860.1;Name=ABJ54860.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0075%3B equivalent gene in S.pneumoniae R6 %3D spr0068%3B identified by match to protein family HMM PF01048;gbkey=CDS;locus_tag=SPD_0074;product=phosphorylase%2C Pnp/Udp family protein%2C putative;protein_id=ABJ54860.1;transl_table=11
CP000410.2	Genbank	gene	76332	76517	.	+	.	ID=gene-SPD_0075;Name=SPD_0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0075
CP000410.2	Genbank	CDS	76332	76517	.	+	0	ID=cds-ABJ54546.1;Parent=gene-SPD_0075;Dbxref=NCBI_GP:ABJ54546.1;Name=ABJ54546.1;gbkey=CDS;locus_tag=SPD_0075;product=hypothetical protein;protein_id=ABJ54546.1;transl_table=11
CP000410.2	Genbank	gene	76686	78065	.	+	.	ID=gene-SPD_0076;Name=SPD_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0076
CP000410.2	Genbank	CDS	76686	78065	.	+	0	ID=cds-ABJ55096.1;Parent=gene-SPD_0076;Dbxref=NCBI_GP:ABJ55096.1;Name=ABJ55096.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0078%3B equivalent gene in S.pneumoniae R6 %3D spr0070%3B identified by match to protein family HMM PF02386;gbkey=CDS;locus_tag=SPD_0076;product=potassium uptake protein%2C Trk family protein;protein_id=ABJ55096.1;transl_table=11
CP000410.2	Genbank	gene	78079	78744	.	+	.	ID=gene-SPD_0077;Name=SPD_0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0077
CP000410.2	Genbank	CDS	78079	78744	.	+	0	ID=cds-ABJ54144.1;Parent=gene-SPD_0077;Dbxref=NCBI_GP:ABJ54144.1;Name=ABJ54144.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0079%3B equivalent gene in S.pneumoniae R6 %3D spr0071%3B identified by match to protein family HMM PF02254;gbkey=CDS;locus_tag=SPD_0077;product=potassium uptake protein%2C Trk family protein;protein_id=ABJ54144.1;transl_table=11
CP000410.2	Genbank	gene	79054	79593	.	+	.	ID=gene-SPD_0078;Name=SPD_0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0078
CP000410.2	Genbank	CDS	79054	79593	.	+	0	ID=cds-ABJ55442.1;Parent=gene-SPD_0078;Dbxref=NCBI_GP:ABJ55442.1;Name=ABJ55442.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0072%3B identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=SPD_0078;product=glycosyl transferase%2C group 2 family protein;protein_id=ABJ55442.1;transl_table=11
CP000410.2	Genbank	gene	79660	80070	.	+	.	ID=gene-SPD_0079;Name=SPD_0079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0079
CP000410.2	Genbank	CDS	79660	80070	.	+	0	ID=cds-ABJ54393.1;Parent=gene-SPD_0079;Dbxref=NCBI_GP:ABJ54393.1;Name=ABJ54393.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0074;gbkey=CDS;locus_tag=SPD_0079;product=hypothetical protein;protein_id=ABJ54393.1;transl_table=11
CP000410.2	Genbank	gene	80186	83671	.	+	.	ID=gene-SPD_0080;Name=SPD_0080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0080
CP000410.2	Genbank	CDS	80186	83671	.	+	0	ID=cds-ABJ53732.1;Parent=gene-SPD_0080;Dbxref=NCBI_GP:ABJ53732.1;Name=ABJ53732.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0075%3B contains 6 repeats of 456-bp SSURE domain%2C exact sequence of repeats could not be determined. Placeholder sequence was inserted containing the 5 repeats used previously in spr0075 in the R6 genome sequence%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF04650%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168;gbkey=CDS;locus_tag=SPD_0080;product=cell wall surface anchor family protein;protein_id=ABJ53732.1;transl_table=11
CP000410.2	Genbank	gene	83838	84536	.	+	.	ID=gene-SPD_0081;Name=SPD_0081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0081
CP000410.2	Genbank	CDS	83838	84536	.	+	0	ID=cds-ABJ55015.1;Parent=gene-SPD_0081;Dbxref=NCBI_GP:ABJ55015.1;Name=ABJ55015.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0083%3B equivalent gene in S.pneumoniae R6 %3D spr0076%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=SPD_0081;product=DNA-binding response regulator;protein_id=ABJ55015.1;transl_table=11
CP000410.2	Genbank	gene	84533	85585	.	+	.	ID=gene-SPD_0082;Name=SPD_0082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0082
CP000410.2	Genbank	CDS	84533	85585	.	+	0	ID=cds-ABJ53714.1;Parent=gene-SPD_0082;Dbxref=NCBI_GP:ABJ53714.1;Name=ABJ53714.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0084%3B equivalent gene in S.pneumoniae R6 %3D spr0077%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=SPD_0082;product=sensor histidine kinase;protein_id=ABJ53714.1;transl_table=11
CP000410.2	Genbank	gene	85780	86391	.	+	.	ID=gene-SPD_0083;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=SPD_0083
CP000410.2	Genbank	CDS	85780	86391	.	+	0	ID=cds-ABJ54877.1;Parent=gene-SPD_0083;Dbxref=NCBI_GP:ABJ54877.1;Name=ABJ54877.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0085%3B equivalent gene in S.pneumoniae R6 %3D spr0078%3B identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017;gbkey=CDS;gene=rpsD;locus_tag=SPD_0083;product=ribosomal protein S4;protein_id=ABJ54877.1;transl_table=11
CP000410.2	Genbank	gene	86577	86735	.	+	.	ID=gene-SPD_0084;Name=SPD_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0084
CP000410.2	Genbank	CDS	86577	86735	.	+	0	ID=cds-ABJ54042.1;Parent=gene-SPD_0084;Dbxref=NCBI_GP:ABJ54042.1;Name=ABJ54042.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0086%3B equivalent gene in S.pneumoniae R6 %3D spr0014 In TIGR4 this gene is annotated as a truncation%3B however in R6 there are numerous near perfect copies as well as copies with a slightly longer version with a different end that is not present in either R6 or TIGR4 This indicates it may still function as a transposase.;gbkey=CDS;locus_tag=SPD_0084;product=IS630-Spn1%2C transposase Orf1;protein_id=ABJ54042.1;transl_table=11
CP000410.2	Genbank	gene	86833	86973	.	-	.	ID=gene-SPD_0085;Name=SPD_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0085
CP000410.2	Genbank	CDS	86833	86973	.	-	0	ID=cds-ABJ54660.1;Parent=gene-SPD_0085;Dbxref=NCBI_GP:ABJ54660.1;Name=ABJ54660.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0087;gbkey=CDS;locus_tag=SPD_0085;product=hypothetical protein;protein_id=ABJ54660.1;transl_table=11
CP000410.2	Genbank	gene	87053	87313	.	+	.	ID=gene-SPD_0086;Name=SPD_0086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0086
CP000410.2	Genbank	CDS	87053	87313	.	+	0	ID=cds-ABJ54780.1;Parent=gene-SPD_0086;Dbxref=NCBI_GP:ABJ54780.1;Name=ABJ54780.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0088%3B equivalent gene in S.pneumoniae R6 %3D spr0080;gbkey=CDS;locus_tag=SPD_0086;product=hypothetical protein;protein_id=ABJ54780.1;transl_table=11
CP000410.2	Genbank	gene	87267	87488	.	+	.	ID=gene-SPD_0087;Name=SPD_0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0087
CP000410.2	Genbank	CDS	87267	87488	.	+	0	ID=cds-ABJ54760.1;Parent=gene-SPD_0087;Dbxref=NCBI_GP:ABJ54760.1;Name=ABJ54760.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0089;gbkey=CDS;locus_tag=SPD_0087;product=hypothetical protein;protein_id=ABJ54760.1;transl_table=11
CP000410.2	Genbank	gene	87807	88736	.	+	.	ID=gene-SPD_0088;Name=SPD_0088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0088
CP000410.2	Genbank	CDS	87807	88736	.	+	0	ID=cds-ABJ53711.1;Parent=gene-SPD_0088;Dbxref=NCBI_GP:ABJ53711.1;Name=ABJ53711.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0090%3B equivalent gene in S.pneumoniae R6 %3D spr0081%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_0088;product=ABC transporter%2C permease protein;protein_id=ABJ53711.1;transl_table=11
CP000410.2	Genbank	gene	88750	89673	.	+	.	ID=gene-SPD_0089;Name=SPD_0089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0089
CP000410.2	Genbank	CDS	88750	89673	.	+	0	ID=cds-ABJ55038.1;Parent=gene-SPD_0089;Dbxref=NCBI_GP:ABJ55038.1;Name=ABJ55038.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0091%3B equivalent gene in S.pneumoniae R6 %3D spr0082%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_0089;product=ABC transporter%2C permease protein;protein_id=ABJ55038.1;transl_table=11
CP000410.2	Genbank	gene	89931	91406	.	+	.	ID=gene-SPD_0090;Name=SPD_0090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0090
CP000410.2	Genbank	CDS	89931	91406	.	+	0	ID=cds-ABJ55224.1;Parent=gene-SPD_0090;Dbxref=NCBI_GP:ABJ55224.1;Name=ABJ55224.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0092%3B equivalent gene in S.pneumoniae R6 %3D spr0083%3B identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=SPD_0090;product=ABC transporter%2C substrate-binding protein;protein_id=ABJ55224.1;transl_table=11
CP000410.2	Genbank	gene	91678	92664	.	+	.	ID=gene-SPD_0091;Name=SPD_0091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0091
CP000410.2	Genbank	CDS	91678	92664	.	+	0	ID=cds-ABJ55429.1;Parent=gene-SPD_0091;Dbxref=NCBI_GP:ABJ55429.1;Name=ABJ55429.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0095%3B equivalent gene in S.pneumoniae R6 %3D spr0084%3B identified by match to protein family HMM PF00581;gbkey=CDS;locus_tag=SPD_0091;product=hypothetical protein;protein_id=ABJ55429.1;transl_table=11
CP000410.2	Genbank	gene	92786	93646	.	+	.	ID=gene-SPD_0092;Name=SPD_0092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0092
CP000410.2	Genbank	CDS	92786	93646	.	+	0	ID=cds-ABJ54434.1;Parent=gene-SPD_0092;Dbxref=NCBI_GP:ABJ54434.1;Name=ABJ54434.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0096%3B equivalent gene in S.pneumoniae R6 %3D spr0085;gbkey=CDS;locus_tag=SPD_0092;product=hypothetical protein;protein_id=ABJ54434.1;transl_table=11
CP000410.2	Genbank	gene	93718	94782	.	-	.	ID=gene-SPD_0093;Name=SPD_0093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0093
CP000410.2	Genbank	CDS	93718	94782	.	-	0	ID=cds-ABJ55170.1;Parent=gene-SPD_0093;Dbxref=NCBI_GP:ABJ55170.1;Name=ABJ55170.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0097%3B equivalent gene in S.pneumoniae R6 %3D spr0086;gbkey=CDS;locus_tag=SPD_0093;product=membrane protein%2C putative;protein_id=ABJ55170.1;transl_table=11
CP000410.2	Genbank	gene	94845	95756	.	-	.	ID=gene-SPD_0094;Name=SPD_0094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0094
CP000410.2	Genbank	CDS	94845	95756	.	-	0	ID=cds-ABJ53867.1;Parent=gene-SPD_0094;Dbxref=NCBI_GP:ABJ53867.1;Name=ABJ53867.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0098%3B equivalent gene in S.pneumoniae R6 %3D spr0087;gbkey=CDS;locus_tag=SPD_0094;product=hypothetical protein;protein_id=ABJ53867.1;transl_table=11
CP000410.2	Genbank	gene	95749	96342	.	-	.	ID=gene-SPD_0095;Name=SPD_0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0095
CP000410.2	Genbank	CDS	95749	96342	.	-	0	ID=cds-ABJ54657.1;Parent=gene-SPD_0095;Dbxref=NCBI_GP:ABJ54657.1;Name=ABJ54657.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0099%3B equivalent gene in S.pneumoniae R6 %3D spr0088;gbkey=CDS;locus_tag=SPD_0095;product=hypothetical protein;protein_id=ABJ54657.1;transl_table=11
CP000410.2	Genbank	gene	96329	96655	.	-	.	ID=gene-SPD_0096;Name=SPD_0096;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0096
CP000410.2	Genbank	CDS	96329	96655	.	-	0	ID=cds-ABJ54022.1;Parent=gene-SPD_0096;Dbxref=NCBI_GP:ABJ54022.1;Name=ABJ54022.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0100%3B equivalent gene in S.pneumoniae R6 %3D spr0089%3B identified by match to protein family HMM PF03551;gbkey=CDS;locus_tag=SPD_0096;product=transcriptional regulator%2C PadR family protein;protein_id=ABJ54022.1;transl_table=11
CP000410.2	Genbank	gene	96794	97960	.	-	.	ID=gene-SPD_0097;Name=SPD_0097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0097
CP000410.2	Genbank	CDS	96794	97960	.	-	0	ID=cds-ABJ53855.1;Parent=gene-SPD_0097;Dbxref=NCBI_GP:ABJ53855.1;Name=ABJ53855.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0101%3B equivalent gene in S.pneumoniae R6 %3D spr0090%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_0097;product=transporter%2C putative;protein_id=ABJ53855.1;transl_table=11
CP000410.2	Genbank	gene	98018	99175	.	+	.	ID=gene-SPD_0098;Name=SPD_0098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0098
CP000410.2	Genbank	CDS	98018	99175	.	+	0	ID=cds-ABJ54981.1;Parent=gene-SPD_0098;Dbxref=NCBI_GP:ABJ54981.1;Name=ABJ54981.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0102%3B equivalent gene in S.pneumoniae R6 %3D spr0091%3B identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=SPD_0098;product=glycosyl transferase%2C group 2 family protein;protein_id=ABJ54981.1;transl_table=11
CP000410.2	Genbank	gene	99217	101067	.	+	.	ID=gene-SPD_0099;Name=capD;gbkey=Gene;gene=capD;gene_biotype=protein_coding;locus_tag=SPD_0099
CP000410.2	Genbank	CDS	99217	101067	.	+	0	ID=cds-ABJ55495.1;Parent=gene-SPD_0099;Dbxref=NCBI_GP:ABJ55495.1;Name=ABJ55495.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0103%3B equivalent gene in S.pneumoniae R6 %3D spr0092%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;gene=capD;locus_tag=SPD_0099;product=capsular polysaccharide biosynthesis protein;protein_id=ABJ55495.1;transl_table=11
CP000410.2	Genbank	pseudogene	101122	101438	.	+	.	ID=gene-SPD_0100;Name=SPD_0100;Note=conserved hypothetical protein%2C FRAMESHIFT;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0100;pseudo=true
CP000410.2	Genbank	gene	101463	102095	.	-	.	ID=gene-SPD_0101;Name=SPD_0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0101
CP000410.2	Genbank	CDS	101463	102095	.	-	0	ID=cds-ABJ54086.1;Parent=gene-SPD_0101;Dbxref=NCBI_GP:ABJ54086.1;Name=ABJ54086.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0104%3B equivalent gene in S.pneumoniae R6 %3D spr0093%3B identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;locus_tag=SPD_0101;product=hydrolase%2C haloacid dehalogenase-like family protein;protein_id=ABJ54086.1;transl_table=11
CP000410.2	Genbank	gene	102117	102989	.	-	.	ID=gene-SPD_0102;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=SPD_0102
CP000410.2	Genbank	CDS	102117	102989	.	-	0	ID=cds-ABJ54821.1;Parent=gene-SPD_0102;Dbxref=NCBI_GP:ABJ54821.1;Name=ABJ54821.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0105%3B equivalent gene in S.pneumoniae R6 %3D spr0094%3B identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00718;gbkey=CDS;gene=sdhA;locus_tag=SPD_0102;product=L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit;protein_id=ABJ54821.1;transl_table=11
CP000410.2	Genbank	gene	102998	103669	.	-	.	ID=gene-SPD_0103;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=SPD_0103
CP000410.2	Genbank	CDS	102998	103669	.	-	0	ID=cds-ABJ54420.1;Parent=gene-SPD_0103;Dbxref=NCBI_GP:ABJ54420.1;Name=ABJ54420.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0106%3B equivalent gene in S.pneumoniae R6 %3D spr0095%3B identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719;gbkey=CDS;gene=sdhB;locus_tag=SPD_0103;product=L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit;protein_id=ABJ54420.1;transl_table=11
CP000410.2	Genbank	gene	103911	104414	.	+	.	ID=gene-SPD_0104;Name=SPD_0104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0104
CP000410.2	Genbank	CDS	103911	104414	.	+	0	ID=cds-ABJ55028.1;Parent=gene-SPD_0104;Dbxref=NCBI_GP:ABJ55028.1;Name=ABJ55028.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0107%3B equivalent gene in S.pneumoniae R6 %3D spr0096%3B identified by match to protein family HMM PF01476;gbkey=CDS;locus_tag=SPD_0104;product=LysM domain protein;protein_id=ABJ55028.1;transl_table=11
CP000410.2	Genbank	gene	104537	104785	.	-	.	ID=gene-SPD_0105;Name=SPD_0105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0105
CP000410.2	Genbank	CDS	104537	104785	.	-	0	ID=cds-ABJ54145.1;Parent=gene-SPD_0105;Dbxref=NCBI_GP:ABJ54145.1;Name=ABJ54145.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0114%3B equivalent gene in S.pneumoniae R6 %3D spr0097;gbkey=CDS;locus_tag=SPD_0105;product=hypothetical protein;protein_id=ABJ54145.1;transl_table=11
CP000410.2	Genbank	gene	105242	105490	.	+	.	ID=gene-SPD_0106;Name=SPD_0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0106
CP000410.2	Genbank	CDS	105242	105490	.	+	0	ID=cds-ABJ55475.1;Parent=gene-SPD_0106;Dbxref=NCBI_GP:ABJ55475.1;Name=ABJ55475.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0098%3B identified by match to protein family HMM TIGR01653;gbkey=CDS;locus_tag=SPD_0106;product=bacteriocin%2C putative;protein_id=ABJ55475.1;transl_table=11
CP000410.2	Genbank	gene	105545	107653	.	+	.	ID=gene-SPD_0107;Name=SPD_0107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0107
CP000410.2	Genbank	CDS	105545	107653	.	+	0	ID=cds-ABJ54667.1;Parent=gene-SPD_0107;Dbxref=NCBI_GP:ABJ54667.1;Name=ABJ54667.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0110%3B equivalent gene in S.pneumoniae R6 %3D spr0099%3B identified by match to protein family HMM TIGR01654;gbkey=CDS;locus_tag=SPD_0107;product=membrnae protein%2C putative;protein_id=ABJ54667.1;transl_table=11
CP000410.2	Genbank	gene	107650	108291	.	+	.	ID=gene-SPD_0108;Name=SPD_0108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0108
CP000410.2	Genbank	CDS	107650	108291	.	+	0	ID=cds-ABJ55281.1;Parent=gene-SPD_0108;Dbxref=NCBI_GP:ABJ55281.1;Name=ABJ55281.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0111%3B equivalent gene in S.pneumoniae R6 %3D spr0100%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0108;product=amino acid ABC transporter%2C ATP-binding protein%2C putative;protein_id=ABJ55281.1;transl_table=11
CP000410.2	Genbank	gene	108497	109303	.	+	.	ID=gene-SPD_0109;Name=SPD_0109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0109
CP000410.2	Genbank	CDS	108497	109303	.	+	0	ID=cds-ABJ54473.1;Parent=gene-SPD_0109;Dbxref=NCBI_GP:ABJ54473.1;Name=ABJ54473.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0112%3B equivalent gene in S.pneumoniae R6 %3D spr0101%3B identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=SPD_0109;product=amino acid ABC transporter%2C periplasmic amino acid-binding protein%2C putative;protein_id=ABJ54473.1;transl_table=11
CP000410.2	Genbank	gene	109320	110516	.	+	.	ID=gene-SPD_0110;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=SPD_0110
CP000410.2	Genbank	CDS	109320	110516	.	+	0	ID=cds-ABJ53962.1;Parent=gene-SPD_0110;Dbxref=NCBI_GP:ABJ53962.1;Name=ABJ53962.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0113%3B equivalent gene in S.pneumoniae R6 %3D spr0102%3B identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032;gbkey=CDS;gene=argG;locus_tag=SPD_0110;product=argininosuccinate synthase;protein_id=ABJ53962.1;transl_table=11
CP000410.2	Genbank	gene	110545	111936	.	+	.	ID=gene-SPD_0111;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=SPD_0111
CP000410.2	Genbank	CDS	110545	111936	.	+	0	ID=cds-ABJ55243.1;Parent=gene-SPD_0111;Dbxref=NCBI_GP:ABJ55243.1;Name=ABJ55243.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0103%3B identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838;gbkey=CDS;gene=argH;locus_tag=SPD_0111;product=argininosuccinate lyase;protein_id=ABJ55243.1;transl_table=11
CP000410.2	Genbank	gene	112225	113088	.	-	.	ID=gene-SPD_0112;Name=SPD_0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0112
CP000410.2	Genbank	CDS	112225	113088	.	-	0	ID=cds-ABJ53610.1;Parent=gene-SPD_0112;Dbxref=NCBI_GP:ABJ53610.1;Name=ABJ53610.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0108%3B equivalent gene in S.pneumoniae R6 %3D spr0104%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_0112;product=hypothetical protein;protein_id=ABJ53610.1;transl_table=11
CP000410.2	Genbank	pseudogene	113542	115773	.	+	.	ID=gene-SPD_0113;Name=SPD_0113;Note=equivalent gene in S.pneumoniae R6 %3D spr0105%3B ABC transporter%2C permease protein%2C authentic truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0113;pseudo=true
CP000410.2	Genbank	gene	115766	116233	.	+	.	ID=gene-SPD_0114;Name=SPD_0114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0114
CP000410.2	Genbank	CDS	115766	116233	.	+	0	ID=cds-ABJ54630.1;Parent=gene-SPD_0114;Dbxref=NCBI_GP:ABJ54630.1;Name=ABJ54630.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0107;gbkey=CDS;locus_tag=SPD_0114;product=hypothetical protein;protein_id=ABJ54630.1;transl_table=11
CP000410.2	Genbank	gene	116230	117582	.	+	.	ID=gene-SPD_0115;Name=SPD_0115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0115
CP000410.2	Genbank	CDS	116230	117582	.	+	0	ID=cds-ABJ54817.1;Parent=gene-SPD_0115;Dbxref=NCBI_GP:ABJ54817.1;Name=ABJ54817.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0108;gbkey=CDS;locus_tag=SPD_0115;product=hypothetical protein;protein_id=ABJ54817.1;transl_table=11
CP000410.2	Genbank	gene	117728	118108	.	+	.	ID=gene-SPD_0116;Name=SPD_0116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0116
CP000410.2	Genbank	CDS	117728	118108	.	+	0	ID=cds-ABJ54187.1;Parent=gene-SPD_0116;Dbxref=NCBI_GP:ABJ54187.1;Name=ABJ54187.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0115%3B equivalent gene in S.pneumoniae R6 %3D spr0109;gbkey=CDS;locus_tag=SPD_0116;product=hypothetical protein;protein_id=ABJ54187.1;transl_table=11
CP000410.2	Genbank	gene	119688	120059	.	+	.	ID=gene-SPD_0117;Name=SPD_0117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0117
CP000410.2	Genbank	CDS	119688	120059	.	+	0	ID=cds-ABJ54614.1;Parent=gene-SPD_0117;Dbxref=NCBI_GP:ABJ54614.1;Name=ABJ54614.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0111;gbkey=CDS;locus_tag=SPD_0117;product=hypothetical protein;protein_id=ABJ54614.1;transl_table=11
CP000410.2	Genbank	gene	120653	120778	.	+	.	ID=gene-SPD_0118;Name=SPD_0118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0118
CP000410.2	Genbank	CDS	120653	120778	.	+	0	ID=cds-ABJ54016.1;Parent=gene-SPD_0118;Dbxref=NCBI_GP:ABJ54016.1;Name=ABJ54016.1;gbkey=CDS;locus_tag=SPD_0118;product=hypothetical protein;protein_id=ABJ54016.1;transl_table=11
CP000410.2	Genbank	gene	121084	122142	.	+	.	ID=gene-SPD_0119;Name=SPD_0119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0119
CP000410.2	Genbank	CDS	121084	122142	.	+	0	ID=cds-ABJ53776.1;Parent=gene-SPD_0119;Dbxref=NCBI_GP:ABJ53776.1;Name=ABJ53776.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0113;gbkey=CDS;locus_tag=SPD_0119;product=membrane protein%2C putative;protein_id=ABJ53776.1;transl_table=11
CP000410.2	Genbank	gene	122456	123433	.	+	.	ID=gene-SPD_0120;Name=SPD_0120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0120
CP000410.2	Genbank	CDS	122456	123433	.	+	0	ID=cds-ABJ54197.1;Parent=gene-SPD_0120;Dbxref=NCBI_GP:ABJ54197.1;Name=ABJ54197.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0114;gbkey=CDS;locus_tag=SPD_0120;product=membrane protein%2C putative;protein_id=ABJ54197.1;transl_table=11
CP000410.2	Genbank	gene	123810	124184	.	+	.	ID=gene-SPD_0121;Name=SPD_0121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0121
CP000410.2	Genbank	CDS	123810	124184	.	+	0	ID=cds-ABJ54852.1;Parent=gene-SPD_0121;Dbxref=NCBI_GP:ABJ54852.1;Name=ABJ54852.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0115;gbkey=CDS;locus_tag=SPD_0121;product=hypothetical protein;protein_id=ABJ54852.1;transl_table=11
CP000410.2	Genbank	gene	124392	125294	.	+	.	ID=gene-SPD_0122;Name=SPD_0122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0122
CP000410.2	Genbank	CDS	124392	125294	.	+	0	ID=cds-ABJ53741.1;Parent=gene-SPD_0122;Dbxref=NCBI_GP:ABJ53741.1;Name=ABJ53741.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0117;gbkey=CDS;locus_tag=SPD_0122;product=hypothetical protein;protein_id=ABJ53741.1;transl_table=11
CP000410.2	Genbank	gene	125350	125703	.	+	.	ID=gene-SPD_0123;Name=SPD_0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0123
CP000410.2	Genbank	CDS	125350	125703	.	+	0	ID=cds-ABJ54465.1;Parent=gene-SPD_0123;Dbxref=NCBI_GP:ABJ54465.1;Name=ABJ54465.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0118;gbkey=CDS;locus_tag=SPD_0123;product=hypothetical protein;protein_id=ABJ54465.1;transl_table=11
CP000410.2	Genbank	gene	125670	126428	.	+	.	ID=gene-SPD_0124;Name=SPD_0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0124
CP000410.2	Genbank	CDS	125670	126428	.	+	0	ID=cds-ABJ54459.1;Parent=gene-SPD_0124;Dbxref=NCBI_GP:ABJ54459.1;Name=ABJ54459.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0119;gbkey=CDS;locus_tag=SPD_0124;product=membrane protein%2C putative;protein_id=ABJ54459.1;transl_table=11
CP000410.2	Genbank	gene	127557	127802	.	+	.	ID=gene-SPD_0125;Name=SPD_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0125
CP000410.2	Genbank	CDS	127557	127802	.	+	0	ID=cds-ABJ55275.1;Parent=gene-SPD_0125;Dbxref=NCBI_GP:ABJ55275.1;Name=ABJ55275.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0116%3B equivalent gene in S.pneumoniae R6 %3D spr0120;gbkey=CDS;locus_tag=SPD_0125;product=hypothetical protein;protein_id=ABJ55275.1;transl_table=11
CP000410.2	Genbank	gene	128356	130215	.	+	.	ID=gene-SPD_0126;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=SPD_0126
CP000410.2	Genbank	CDS	128356	130215	.	+	0	ID=cds-ABJ54172.1;Parent=gene-SPD_0126;Dbxref=NCBI_GP:ABJ54172.1;Name=ABJ54172.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0121%3B identified by match to protein family HMM PF01473;gbkey=CDS;gene=pspA;locus_tag=SPD_0126;product=pneumococcal surface protein A;protein_id=ABJ54172.1;transl_table=11
CP000410.2	Genbank	gene	130616	131737	.	+	.	ID=gene-SPD_0127;Name=trmU;gbkey=Gene;gene=trmU;gene_biotype=protein_coding;locus_tag=SPD_0127
CP000410.2	Genbank	CDS	130616	131737	.	+	0	ID=cds-ABJ55053.1;Parent=gene-SPD_0127;Dbxref=NCBI_GP:ABJ55053.1;Name=ABJ55053.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0118%3B equivalent gene in S.pneumoniae R6 %3D spr0122%3B identified by match to protein family HMM PF01171%3B match to protein family HMM PF03054%3B match to protein family HMM TIGR00420;gbkey=CDS;gene=trmU;locus_tag=SPD_0127;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=ABJ55053.1;transl_table=11
CP000410.2	Genbank	gene	131878	132333	.	+	.	ID=gene-SPD_0128;Name=SPD_0128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0128
CP000410.2	Genbank	CDS	131878	132333	.	+	0	ID=cds-ABJ54740.1;Parent=gene-SPD_0128;Dbxref=NCBI_GP:ABJ54740.1;Name=ABJ54740.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0119%3B equivalent gene in S.pneumoniae R6 %3D spr0123%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_0128;product=MutT/nudix family protein;protein_id=ABJ54740.1;transl_table=11
CP000410.2	Genbank	gene	132343	134256	.	+	.	ID=gene-SPD_0129;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=SPD_0129
CP000410.2	Genbank	CDS	132343	134256	.	+	0	ID=cds-ABJ53608.1;Parent=gene-SPD_0129;Dbxref=NCBI_GP:ABJ53608.1;Name=ABJ53608.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0120%3B equivalent gene in S.pneumoniae R6 %3D spr0124%3B identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136;gbkey=CDS;gene=gidA;locus_tag=SPD_0129;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA(glucose-inhibited division protein A);protein_id=ABJ53608.1;transl_table=11
CP000410.2	Genbank	gene	134636	136315	.	-	.	ID=gene-SPD_0130;Name=SPD_0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0130
CP000410.2	Genbank	CDS	134636	136315	.	-	0	ID=cds-ABJ54456.1;Parent=gene-SPD_0130;Dbxref=NCBI_GP:ABJ54456.1;Name=ABJ54456.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0121%3B equivalent gene in S.pneumoniae R6 %3D spr0125%3B identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649;gbkey=CDS;locus_tag=SPD_0130;product=metallo-beta-lactamase superfamily protein domain protein;protein_id=ABJ54456.1;transl_table=11
CP000410.2	Genbank	gene	136317	136550	.	-	.	ID=gene-SPD_0131;Name=SPD_0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0131
CP000410.2	Genbank	CDS	136317	136550	.	-	0	ID=cds-ABJ53868.1;Parent=gene-SPD_0131;Dbxref=NCBI_GP:ABJ53868.1;Name=ABJ53868.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0122%3B equivalent gene in S.pneumoniae R6 %3D spr0126%3B identified by match to protein family HMM PF07288;gbkey=CDS;locus_tag=SPD_0131;product=hypothetical protein;protein_id=ABJ53868.1;transl_table=11
CP000410.2	Genbank	gene	137368	137520	.	-	.	ID=gene-SPD_0132;Name=SPD_0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0132
CP000410.2	Genbank	CDS	137368	137520	.	-	0	ID=cds-ABJ54891.1;Parent=gene-SPD_0132;Dbxref=NCBI_GP:ABJ54891.1;Name=ABJ54891.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0124%3B equivalent gene in S.pneumoniae R6 %3D spr0127%3B identified by match to protein family HMM TIGR01847;gbkey=CDS;locus_tag=SPD_0132;product=hypothetical protein;protein_id=ABJ54891.1;transl_table=11
CP000410.2	Genbank	gene	137522	137707	.	-	.	ID=gene-SPD_0133;Name=SPD_0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0133
CP000410.2	Genbank	CDS	137522	137707	.	-	0	ID=cds-ABJ55087.1;Parent=gene-SPD_0133;Dbxref=NCBI_GP:ABJ55087.1;Name=ABJ55087.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0125%3B equivalent gene in S.pneumoniae R6 %3D spr0128;gbkey=CDS;locus_tag=SPD_0133;product=hypothetical protein;protein_id=ABJ55087.1;transl_table=11
CP000410.2	Genbank	gene	137885	138568	.	+	.	ID=gene-SPD_0134;Name=SPD_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0134
CP000410.2	Genbank	CDS	137885	138568	.	+	0	ID=cds-ABJ55072.1;Parent=gene-SPD_0134;Dbxref=NCBI_GP:ABJ55072.1;Name=ABJ55072.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0127%3B equivalent gene in S.pneumoniae R6 %3D spr0129%3B identified by match to protein family HMM PF00814;gbkey=CDS;locus_tag=SPD_0134;product=hypothetical protein;protein_id=ABJ55072.1;transl_table=11
CP000410.2	Genbank	gene	138565	139002	.	+	.	ID=gene-SPD_0135;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=SPD_0135
CP000410.2	Genbank	CDS	138565	139002	.	+	0	ID=cds-ABJ54471.1;Parent=gene-SPD_0135;Dbxref=NCBI_GP:ABJ54471.1;Name=ABJ54471.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0128%3B equivalent gene in S.pneumoniae R6 %3D spr0130%3B identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575;gbkey=CDS;gene=rimI;locus_tag=SPD_0135;product=ribosomal-protein-alanine acetyltransferase;protein_id=ABJ54471.1;transl_table=11
CP000410.2	Genbank	gene	138992	140002	.	+	.	ID=gene-SPD_0136;Name=SPD_0136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0136
CP000410.2	Genbank	CDS	138992	140002	.	+	0	ID=cds-ABJ55359.1;Parent=gene-SPD_0136;Dbxref=NCBI_GP:ABJ55359.1;Name=ABJ55359.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0129%3B equivalent gene in S.pneumoniae R6 %3D spr0131%3B identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329;gbkey=CDS;locus_tag=SPD_0136;product=glycoprotease family protein;protein_id=ABJ55359.1;transl_table=11
CP000410.2	Genbank	pseudogene	140042	141335	.	-	.	ID=gene-SPD_0137;Name=SPD_0137;Note=equivalent gene in S.pneumoniae R6 %3D spr0132%3B IS1167%2C transposase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0137;pseudo=true
CP000410.2	Genbank	gene	142604	143809	.	+	.	ID=gene-SPD_0138;Name=SPD_0138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0138
CP000410.2	Genbank	CDS	142604	143809	.	+	0	ID=cds-ABJ54624.1;Parent=gene-SPD_0138;Dbxref=NCBI_GP:ABJ54624.1;Name=ABJ54624.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0133%3B equivalent gene in S.pneumoniae R6 %3D spr0135%3B identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=SPD_0138;product=glycosyl transferase%2C group 1 family protein;protein_id=ABJ54624.1;transl_table=11
CP000410.2	Genbank	gene	143802	144755	.	+	.	ID=gene-SPD_0139;Name=SPD_0139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0139
CP000410.2	Genbank	CDS	143802	144755	.	+	0	ID=cds-ABJ55201.1;Parent=gene-SPD_0139;Dbxref=NCBI_GP:ABJ55201.1;Name=ABJ55201.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0136%3B equivalent gene in S.pneumoniae R6 %3D spr0136%3B identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=SPD_0139;product=glycosyl transferase%2C group 2 family protein;protein_id=ABJ55201.1;transl_table=11
CP000410.2	Genbank	gene	144765	146381	.	+	.	ID=gene-SPD_0140;Name=SPD_0140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0140
CP000410.2	Genbank	CDS	144765	146381	.	+	0	ID=cds-ABJ54993.1;Parent=gene-SPD_0140;Dbxref=NCBI_GP:ABJ54993.1;Name=ABJ54993.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0137%3B equivalent gene in S.pneumoniae R6 %3D spr0137%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0140;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54993.1;transl_table=11
CP000410.2	Genbank	gene	146691	147158	.	+	.	ID=gene-SPD_0141;Name=SPD_0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0141
CP000410.2	Genbank	CDS	146691	147158	.	+	0	ID=cds-ABJ53713.1;Parent=gene-SPD_0141;Dbxref=NCBI_GP:ABJ53713.1;Name=ABJ53713.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0138;gbkey=CDS;locus_tag=SPD_0141;product=hypothetical protein;protein_id=ABJ53713.1;transl_table=11
CP000410.2	Genbank	gene	147164	147919	.	+	.	ID=gene-SPD_0142;Name=SPD_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0142
CP000410.2	Genbank	CDS	147164	147919	.	+	0	ID=cds-ABJ54768.1;Parent=gene-SPD_0142;Dbxref=NCBI_GP:ABJ54768.1;Name=ABJ54768.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0139%3B equivalent gene in S.pneumoniae R6 %3D spr0138%3B identified by match to protein family HMM PF02585;gbkey=CDS;locus_tag=SPD_0142;product=hypothetical protein;protein_id=ABJ54768.1;transl_table=11
CP000410.2	Genbank	gene	147932	149104	.	+	.	ID=gene-SPD_0143;Name=SPD_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0143
CP000410.2	Genbank	CDS	147932	149104	.	+	0	ID=cds-ABJ53636.1;Parent=gene-SPD_0143;Dbxref=NCBI_GP:ABJ53636.1;Name=ABJ53636.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0139%3B identified by match to protein family HMM PF00984%3B match to protein family HMM PF03721;gbkey=CDS;locus_tag=SPD_0143;product=UDP-glucose 6-dehydrogenase%2C putative;protein_id=ABJ53636.1;transl_table=11
CP000410.2	Genbank	gene	149499	150362	.	+	.	ID=gene-SPD_0144;Name=SPD_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0144
CP000410.2	Genbank	CDS	149499	150362	.	+	0	ID=cds-ABJ54913.1;Parent=gene-SPD_0144;Dbxref=NCBI_GP:ABJ54913.1;Name=ABJ54913.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0141%3B equivalent gene in S.pneumoniae R6 %3D spr0140%3B identified by match to protein family HMM TIGR01716;gbkey=CDS;locus_tag=SPD_0144;product=transcriptional regulator;protein_id=ABJ54913.1;transl_table=11
CP000410.2	Genbank	gene	150653	150886	.	+	.	ID=gene-SPD_0145;Name=SPD_0145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0145
CP000410.2	Genbank	CDS	150653	150886	.	+	0	ID=cds-ABJ54385.1;Parent=gene-SPD_0145;Dbxref=NCBI_GP:ABJ54385.1;Name=ABJ54385.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0142%3B equivalent gene in S.pneumoniae R6 %3D spr0141;gbkey=CDS;locus_tag=SPD_0145;product=hypothetical protein;protein_id=ABJ54385.1;transl_table=11
CP000410.2	Genbank	gene	150908	151585	.	+	.	ID=gene-SPD_0146;Name=SPD_0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0146
CP000410.2	Genbank	CDS	150908	151585	.	+	0	ID=cds-ABJ54648.1;Parent=gene-SPD_0146;Dbxref=NCBI_GP:ABJ54648.1;Name=ABJ54648.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0143%3B equivalent gene in S.pneumoniae R6 %3D spr0142%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_0146;product=CAAX amino terminal protease family protein;protein_id=ABJ54648.1;transl_table=11
CP000410.2	Genbank	gene	151597	152262	.	+	.	ID=gene-SPD_0147;Name=SPD_0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0147
CP000410.2	Genbank	CDS	151597	152262	.	+	0	ID=cds-ABJ54122.1;Parent=gene-SPD_0147;Dbxref=NCBI_GP:ABJ54122.1;Name=ABJ54122.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0144%3B equivalent gene in S.pneumoniae R6 %3D spr0143%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_0147;product=CAAX amino terminal protease family protein;protein_id=ABJ54122.1;transl_table=11
CP000410.2	Genbank	gene	152334	153560	.	+	.	ID=gene-SPD_0148;Name=SPD_0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0148
CP000410.2	Genbank	CDS	152334	153560	.	+	0	ID=cds-ABJ55357.1;Parent=gene-SPD_0148;Dbxref=NCBI_GP:ABJ55357.1;Name=ABJ55357.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0145%3B equivalent gene in S.pneumoniae R6 %3D spr0144%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_0148;product=transporter%2C major facilitator family protein;protein_id=ABJ55357.1;transl_table=11
CP000410.2	Genbank	gene	153893	154366	.	+	.	ID=gene-SPD_0149;Name=SPD_0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0149
CP000410.2	Genbank	CDS	153893	154366	.	+	0	ID=cds-ABJ54862.1;Parent=gene-SPD_0149;Dbxref=NCBI_GP:ABJ54862.1;Name=ABJ54862.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0146%3B equivalent gene in S.pneumoniae R6 %3D spr0145%3B identified by match to protein family HMM PF03591;gbkey=CDS;locus_tag=SPD_0149;product=hypothetical protein;protein_id=ABJ54862.1;transl_table=11
CP000410.2	Genbank	gene	154470	155300	.	+	.	ID=gene-SPD_0150;Name=SPD_0150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0150
CP000410.2	Genbank	CDS	154470	155300	.	+	0	ID=cds-ABJ55394.1;Parent=gene-SPD_0150;Dbxref=NCBI_GP:ABJ55394.1;Name=ABJ55394.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0148%3B equivalent gene in S.pneumoniae R6 %3D spr0146%3B identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=SPD_0150;product=ABC transporter%2C substrate-binding protein;protein_id=ABJ55394.1;transl_table=11
CP000410.2	Genbank	gene	155454	156308	.	+	.	ID=gene-SPD_0151;Name=SPD_0151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0151
CP000410.2	Genbank	CDS	155454	156308	.	+	0	ID=cds-ABJ54743.1;Parent=gene-SPD_0151;Dbxref=NCBI_GP:ABJ54743.1;Name=ABJ54743.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0149%3B equivalent gene in S.pneumoniae R6 %3D spr0147%3B identified by match to protein family HMM PF03180;gbkey=CDS;locus_tag=SPD_0151;product=lipoprotein;protein_id=ABJ54743.1;transl_table=11
CP000410.2	Genbank	gene	156408	157781	.	+	.	ID=gene-SPD_0152;Name=SPD_0152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0152
CP000410.2	Genbank	CDS	156408	157781	.	+	0	ID=cds-ABJ53683.1;Parent=gene-SPD_0152;Dbxref=NCBI_GP:ABJ53683.1;Name=ABJ53683.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0150%3B equivalent gene in S.pneumoniae R6 %3D spr0148%3B identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687;gbkey=CDS;locus_tag=SPD_0152;product=peptidase%2C M20/M25/M40 family protein;protein_id=ABJ53683.1;transl_table=11
CP000410.2	Genbank	gene	157774	158835	.	+	.	ID=gene-SPD_0153;Name=SPD_0153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0153
CP000410.2	Genbank	CDS	157774	158835	.	+	0	ID=cds-ABJ54124.1;Parent=gene-SPD_0153;Dbxref=NCBI_GP:ABJ54124.1;Name=ABJ54124.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0151%3B equivalent gene in S.pneumoniae R6 %3D spr0149%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0153;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54124.1;transl_table=11
CP000410.2	Genbank	gene	158837	159529	.	+	.	ID=gene-SPD_0154;Name=SPD_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0154
CP000410.2	Genbank	CDS	158837	159529	.	+	0	ID=cds-ABJ55407.1;Parent=gene-SPD_0154;Dbxref=NCBI_GP:ABJ55407.1;Name=ABJ55407.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0152%3B equivalent gene in S.pneumoniae R6 %3D spr0150%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_0154;product=ABC transporter%2C permease protein%2C putative;protein_id=ABJ55407.1;transl_table=11
CP000410.2	Genbank	gene	159559	160128	.	-	.	ID=gene-SPD_0155;Name=SPD_0155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0155
CP000410.2	Genbank	CDS	159559	160128	.	-	0	ID=cds-ABJ55019.1;Parent=gene-SPD_0155;Dbxref=NCBI_GP:ABJ55019.1;Name=ABJ55019.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0153%3B equivalent gene in S.pneumoniae R6 %3D spr0151%3B identified by match to protein family HMM TIGR02185;gbkey=CDS;locus_tag=SPD_0155;product=membrane protein%2C putative;protein_id=ABJ55019.1;transl_table=11
CP000410.2	Genbank	gene	160263	160877	.	+	.	ID=gene-SPD_0156;Name=SPD_0156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0156
CP000410.2	Genbank	CDS	160263	160877	.	+	0	ID=cds-ABJ53961.1;Parent=gene-SPD_0156;Dbxref=NCBI_GP:ABJ53961.1;Name=ABJ53961.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0154%3B equivalent gene in S.pneumoniae R6 %3D spr0152%3B identified by match to protein family HMM PF04854;gbkey=CDS;locus_tag=SPD_0156;product=membrane protein%2C putative;protein_id=ABJ53961.1;transl_table=11
CP000410.2	Genbank	gene	160879	162525	.	+	.	ID=gene-SPD_0157;Name=SPD_0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0157
CP000410.2	Genbank	CDS	160879	162525	.	+	0	ID=cds-ABJ53613.1;Parent=gene-SPD_0157;Dbxref=NCBI_GP:ABJ53613.1;Name=ABJ53613.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0155%3B equivalent gene in S.pneumoniae R6 %3D spr0153%3B identified by match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM PF06580;gbkey=CDS;locus_tag=SPD_0157;product=sensor histidine kinase%2C putative;protein_id=ABJ53613.1;transl_table=11
CP000410.2	Genbank	gene	162537	163823	.	+	.	ID=gene-SPD_0158;Name=SPD_0158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0158
CP000410.2	Genbank	CDS	162537	163823	.	+	0	ID=cds-ABJ54956.1;Parent=gene-SPD_0158;Dbxref=NCBI_GP:ABJ54956.1;Name=ABJ54956.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0156%3B equivalent gene in S.pneumoniae R6 %3D spr0154%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165;gbkey=CDS;locus_tag=SPD_0158;product=DNA-binding response regulator;protein_id=ABJ54956.1;transl_table=11
CP000410.2	Genbank	gene	163875	164408	.	+	.	ID=gene-SPD_0159;Name=SPD_0159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0159
CP000410.2	Genbank	CDS	163875	164408	.	+	0	ID=cds-ABJ54556.1;Parent=gene-SPD_0159;Dbxref=NCBI_GP:ABJ54556.1;Name=ABJ54556.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0157%3B equivalent gene in S.pneumoniae R6 %3D spr0155;gbkey=CDS;locus_tag=SPD_0159;product=membrane protein putative;protein_id=ABJ54556.1;transl_table=11
CP000410.2	Genbank	gene	164486	164956	.	+	.	ID=gene-SPD_0160;Name=SPD_0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0160
CP000410.2	Genbank	CDS	164486	164956	.	+	0	ID=cds-ABJ54373.1;Parent=gene-SPD_0160;Dbxref=NCBI_GP:ABJ54373.1;Name=ABJ54373.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0158%3B equivalent gene in S.pneumoniae R6 %3D spr0156%3B identified by match to protein family HMM PF07972;gbkey=CDS;locus_tag=SPD_0160;product=nrdI protein%2C putative;protein_id=ABJ54373.1;transl_table=11
CP000410.2	Genbank	gene	165249	166511	.	-	.	ID=gene-SPD_0161;Name=SPD_0161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0161
CP000410.2	Genbank	CDS	165249	166511	.	-	0	ID=cds-ABJ55185.1;Parent=gene-SPD_0161;Dbxref=NCBI_GP:ABJ55185.1;Name=ABJ55185.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0159%3B equivalent gene in S.pneumoniae R6 %3D spr0157;gbkey=CDS;locus_tag=SPD_0161;product=membrane protein%2C putative;protein_id=ABJ55185.1;transl_table=11
CP000410.2	Genbank	gene	166821	167279	.	-	.	ID=gene-SPD_0162;Name=SPD_0162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0162
CP000410.2	Genbank	CDS	166821	167279	.	-	0	ID=cds-ABJ54158.1;Parent=gene-SPD_0162;Dbxref=NCBI_GP:ABJ54158.1;Name=ABJ54158.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0160%3B equivalent gene in S.pneumoniae R6 %3D spr0158;gbkey=CDS;locus_tag=SPD_0162;product=membrane protein%2C putative;protein_id=ABJ54158.1;transl_table=11
CP000410.2	Genbank	gene	167276	167716	.	-	.	ID=gene-SPD_0163;Name=SPD_0163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0163
CP000410.2	Genbank	CDS	167276	167716	.	-	0	ID=cds-ABJ54998.1;Parent=gene-SPD_0163;Dbxref=NCBI_GP:ABJ54998.1;Name=ABJ54998.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0161%3B equivalent gene in S.pneumoniae R6 %3D spr0159%3B identified by match to protein family HMM PF04397;gbkey=CDS;locus_tag=SPD_0163;product=hypothetical protein;protein_id=ABJ54998.1;transl_table=11
CP000410.2	Genbank	gene	167832	168011	.	+	.	ID=gene-SPD_0164;Name=SPD_0164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0164
CP000410.2	Genbank	CDS	167832	168011	.	+	0	ID=cds-ABJ53878.1;Parent=gene-SPD_0164;Dbxref=NCBI_GP:ABJ53878.1;Name=ABJ53878.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0172;gbkey=CDS;locus_tag=SPD_0164;product=hypothetical protein;protein_id=ABJ53878.1;transl_table=11
CP000410.2	Genbank	gene	168072	170021	.	+	.	ID=gene-SPD_0165;Name=hexB;gbkey=Gene;gene=hexB;gene_biotype=protein_coding;locus_tag=SPD_0165
CP000410.2	Genbank	CDS	168072	170021	.	+	0	ID=cds-ABJ54692.1;Parent=gene-SPD_0165;Dbxref=NCBI_GP:ABJ54692.1;Name=ABJ54692.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0173%3B equivalent gene in S.pneumoniae R6 %3D spr0160%3B identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00585;gbkey=CDS;gene=hexB;locus_tag=SPD_0165;product=DNA mismatch repair protein HexB;protein_id=ABJ54692.1;transl_table=11
CP000410.2	Genbank	gene	170346	170813	.	-	.	ID=gene-SPD_0166;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=SPD_0166
CP000410.2	Genbank	CDS	170346	170813	.	-	0	ID=cds-ABJ55434.1;Parent=gene-SPD_0166;Dbxref=NCBI_GP:ABJ55434.1;Name=ABJ55434.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0175%3B equivalent gene in S.pneumoniae R6 %3D spr0161%3B identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114;gbkey=CDS;gene=ribH;locus_tag=SPD_0166;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=ABJ55434.1;transl_table=11
CP000410.2	Genbank	gene	170814	172019	.	-	.	ID=gene-SPD_0167;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=SPD_0167
CP000410.2	Genbank	CDS	170814	172019	.	-	0	ID=cds-ABJ54400.1;Parent=gene-SPD_0167;Dbxref=NCBI_GP:ABJ54400.1;Name=ABJ54400.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0176%3B equivalent gene in S.pneumoniae R6 %3D spr0162%3B identified by match to protein family HMM PF00925%3B match to protein family HMM PF00926%3B match to protein family HMM TIGR00505%3B match to protein family HMM TIGR00506;gbkey=CDS;gene=ribB;locus_tag=SPD_0167;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II;protein_id=ABJ54400.1;transl_table=11
CP000410.2	Genbank	gene	172039	172674	.	-	.	ID=gene-SPD_0168;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=SPD_0168
CP000410.2	Genbank	CDS	172039	172674	.	-	0	ID=cds-ABJ55093.1;Parent=gene-SPD_0168;Dbxref=NCBI_GP:ABJ55093.1;Name=ABJ55093.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0177%3B equivalent gene in S.pneumoniae R6 %3D spr0163%3B identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187;gbkey=CDS;gene=ribE;locus_tag=SPD_0168;product=riboflavin synthase%2C alpha subunit;protein_id=ABJ55093.1;transl_table=11
CP000410.2	Genbank	gene	172659	173759	.	-	.	ID=gene-SPD_0169;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=SPD_0169
CP000410.2	Genbank	CDS	172659	173759	.	-	0	ID=cds-ABJ54069.1;Parent=gene-SPD_0169;Dbxref=NCBI_GP:ABJ54069.1;Name=ABJ54069.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0178%3B equivalent gene in S.pneumoniae R6 %3D spr0164%3B identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326;gbkey=CDS;gene=ribD;locus_tag=SPD_0169;product=riboflavin biosynthesis protein RibD;protein_id=ABJ54069.1;transl_table=11
CP000410.2	Genbank	gene	174163	174756	.	+	.	ID=gene-SPD_0170;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=SPD_0170
CP000410.2	Genbank	CDS	174163	174756	.	+	0	ID=cds-ABJ53778.1;Parent=gene-SPD_0170;Dbxref=NCBI_GP:ABJ53778.1;Name=ABJ53778.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0179%3B equivalent gene in S.pneumoniae R6 %3D spr0165%3B identified by match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084;gbkey=CDS;gene=ruvA;locus_tag=SPD_0170;product=Holliday junction DNA helicase RuvA;protein_id=ABJ53778.1;transl_table=11
CP000410.2	Genbank	gene	174766	175329	.	+	.	ID=gene-SPD_0171;Name=tag;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=SPD_0171
CP000410.2	Genbank	CDS	174766	175329	.	+	0	ID=cds-ABJ54764.1;Parent=gene-SPD_0171;Dbxref=NCBI_GP:ABJ54764.1;Name=ABJ54764.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0180%3B equivalent gene in S.pneumoniae R6 %3D spr0166%3B identified by match to protein family HMM PF03352;gbkey=CDS;gene=tag;locus_tag=SPD_0171;product=DNA-3-methyladenine glycosylase I;protein_id=ABJ54764.1;transl_table=11
CP000410.2	Genbank	gene	175326	176003	.	+	.	ID=gene-SPD_0172;Name=SPD_0172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0172
CP000410.2	Genbank	CDS	175326	176003	.	+	0	ID=cds-ABJ53999.1;Parent=gene-SPD_0172;Dbxref=NCBI_GP:ABJ53999.1;Name=ABJ53999.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0181%3B equivalent gene in S.pneumoniae R6 %3D spr0167%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_0172;product=CAAX amino terminal protease family protein;protein_id=ABJ53999.1;transl_table=11
CP000410.2	Genbank	gene	176158	177189	.	-	.	ID=gene-SPD_0173;Name=SPD_0173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0173
CP000410.2	Genbank	CDS	176158	177189	.	-	0	ID=cds-ABJ54812.1;Parent=gene-SPD_0173;Dbxref=NCBI_GP:ABJ54812.1;Name=ABJ54812.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0182%3B equivalent gene in S.pneumoniae R6 %3D spr0168%3B identified by match to protein family HMM PF02016;gbkey=CDS;locus_tag=SPD_0173;product=MccC family protein;protein_id=ABJ54812.1;transl_table=11
CP000410.2	Genbank	gene	177444	178148	.	-	.	ID=gene-SPD_0174;Name=SPD_0174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0174
CP000410.2	Genbank	CDS	177444	178148	.	-	0	ID=cds-ABJ55217.1;Parent=gene-SPD_0174;Dbxref=NCBI_GP:ABJ55217.1;Name=ABJ55217.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0184%3B equivalent gene in S.pneumoniae R6 %3D spr0169%3B identified by match to protein family HMM PF06570;gbkey=CDS;locus_tag=SPD_0174;product=membrnae protein%2C putative;protein_id=ABJ55217.1;transl_table=11
CP000410.2	Genbank	gene	178139	179083	.	-	.	ID=gene-SPD_0175;Name=SPD_0175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0175
CP000410.2	Genbank	CDS	178139	179083	.	-	0	ID=cds-ABJ54109.1;Parent=gene-SPD_0175;Dbxref=NCBI_GP:ABJ54109.1;Name=ABJ54109.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0185%3B equivalent gene in S.pneumoniae R6 %3D spr0170%3B identified by match to protein family HMM PF01544;gbkey=CDS;locus_tag=SPD_0175;product=magnesium transporter%2C CorA family protein;protein_id=ABJ54109.1;transl_table=11
CP000410.2	Genbank	gene	179215	182046	.	+	.	ID=gene-SPD_0176;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=SPD_0176
CP000410.2	Genbank	CDS	179215	182046	.	+	0	ID=cds-ABJ55421.1;Parent=gene-SPD_0176;Dbxref=NCBI_GP:ABJ55421.1;Name=ABJ55421.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0186%3B equivalent gene in S.pneumoniae R6 %3D spr0171%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630;gbkey=CDS;gene=uvrA;locus_tag=SPD_0176;product=excinuclease ABC%2C A subunit;protein_id=ABJ55421.1;transl_table=11
CP000410.2	Genbank	gene	182039	183100	.	+	.	ID=gene-SPD_0177;Name=SPD_0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0177
CP000410.2	Genbank	CDS	182039	183100	.	+	0	ID=cds-ABJ54431.1;Parent=gene-SPD_0177;Dbxref=NCBI_GP:ABJ54431.1;Name=ABJ54431.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0187%3B equivalent gene in S.pneumoniae R6 %3D spr0172%3B identified by match to protein family HMM PF00557;gbkey=CDS;locus_tag=SPD_0177;product=peptidase M24 family protein;protein_id=ABJ54431.1;transl_table=11
CP000410.2	Genbank	gene	183232	183630	.	+	.	ID=gene-SPD_0178;Name=SPD_0178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0178
CP000410.2	Genbank	CDS	183232	183630	.	+	0	ID=cds-ABJ54729.1;Parent=gene-SPD_0178;Dbxref=NCBI_GP:ABJ54729.1;Name=ABJ54729.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0189%3B equivalent gene in S.pneumoniae R6 %3D spr0173%3B identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617;gbkey=CDS;locus_tag=SPD_0178;product=hypothetical protein;protein_id=ABJ54729.1;transl_table=11
CP000410.2	Genbank	gene	183696	184265	.	+	.	ID=gene-SPD_0179;Name=SPD_0179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0179
CP000410.2	Genbank	CDS	183696	184265	.	+	0	ID=cds-ABJ53699.1;Parent=gene-SPD_0179;Dbxref=NCBI_GP:ABJ53699.1;Name=ABJ53699.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0191%3B equivalent gene in S.pneumoniae R6 %3D spr0174;gbkey=CDS;locus_tag=SPD_0179;product=lipoprotein%2C putative;protein_id=ABJ53699.1;transl_table=11
CP000410.2	Genbank	gene	184352	184618	.	+	.	ID=gene-SPD_0180;Name=SPD_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0180
CP000410.2	Genbank	CDS	184352	184618	.	+	0	ID=cds-ABJ54656.1;Parent=gene-SPD_0180;Dbxref=NCBI_GP:ABJ54656.1;Name=ABJ54656.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0192%3B equivalent gene in S.pneumoniae R6 %3D spr0175%3B identified by match to protein family HMM PF06135;gbkey=CDS;locus_tag=SPD_0180;product=hypothetical protein;protein_id=ABJ54656.1;transl_table=11
CP000410.2	Genbank	gene	184622	185041	.	+	.	ID=gene-SPD_0181;Name=SPD_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0181
CP000410.2	Genbank	CDS	184622	185041	.	+	0	ID=cds-ABJ54115.1;Parent=gene-SPD_0181;Dbxref=NCBI_GP:ABJ54115.1;Name=ABJ54115.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0176%3B identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250;gbkey=CDS;locus_tag=SPD_0181;product=conserved hypothetical protein TIGR00250;protein_id=ABJ54115.1;transl_table=11
CP000410.2	Genbank	gene	185057	185362	.	+	.	ID=gene-SPD_0182;Name=SPD_0182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0182
CP000410.2	Genbank	CDS	185057	185362	.	+	0	ID=cds-ABJ54979.1;Parent=gene-SPD_0182;Dbxref=NCBI_GP:ABJ54979.1;Name=ABJ54979.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0194%3B equivalent gene in S.pneumoniae R6 %3D spr0177%3B identified by match to protein family HMM PF06949;gbkey=CDS;locus_tag=SPD_0182;product=hypothetical protein;protein_id=ABJ54979.1;transl_table=11
CP000410.2	Genbank	gene	185813	187069	.	+	.	ID=gene-SPD_0183;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=SPD_0183
CP000410.2	Genbank	CDS	185813	187069	.	+	0	ID=cds-ABJ54790.1;Parent=gene-SPD_0183;Dbxref=NCBI_GP:ABJ54790.1;Name=ABJ54790.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0197%3B equivalent gene in S.pneumoniae R6 %3D spr0178%3B identified by match to protein family HMM PF02875%3B match to protein family HMM TIGR01499;gbkey=CDS;gene=folC;locus_tag=SPD_0183;product=folylpolyglutamate synthase;protein_id=ABJ54790.1;transl_table=11
CP000410.2	Genbank	gene	187153	187584	.	+	.	ID=gene-SPD_0184;Name=SPD_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0184
CP000410.2	Genbank	CDS	187153	187584	.	+	0	ID=cds-ABJ53820.1;Parent=gene-SPD_0184;Dbxref=NCBI_GP:ABJ53820.1;Name=ABJ53820.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0179;gbkey=CDS;locus_tag=SPD_0184;product=lipoprotein%2C putative;protein_id=ABJ53820.1;transl_table=11
CP000410.2	Genbank	gene	187730	189262	.	+	.	ID=gene-SPD_0185;Name=SPD_0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0185
CP000410.2	Genbank	CDS	187730	189262	.	+	0	ID=cds-ABJ54976.1;Parent=gene-SPD_0185;Dbxref=NCBI_GP:ABJ54976.1;Name=ABJ54976.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0199%3B equivalent gene in S.pneumoniae R6 %3D spr0180%3B identified by match to protein family HMM PF00614;gbkey=CDS;locus_tag=SPD_0185;product=cardiolipin synthetase;protein_id=ABJ54976.1;transl_table=11
CP000410.2	Genbank	gene	189520	191058	.	+	.	ID=gene-SPD_0186;Name=SPD_0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0186
CP000410.2	Genbank	CDS	189520	191058	.	+	0	ID=cds-ABJ53888.1;Parent=gene-SPD_0186;Dbxref=NCBI_GP:ABJ53888.1;Name=ABJ53888.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0200%3B equivalent gene in S.pneumoniae R6 %3D spr0182;gbkey=CDS;locus_tag=SPD_0186;product=competence-induced protein Ccs4;protein_id=ABJ53888.1;transl_table=11
CP000410.2	Genbank	gene	191178	193385	.	+	.	ID=gene-SPD_0187;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=SPD_0187
CP000410.2	Genbank	CDS	191178	193385	.	+	0	ID=cds-ABJ55183.1;Parent=gene-SPD_0187;Dbxref=NCBI_GP:ABJ55183.1;Name=ABJ55183.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0202%3B equivalent gene in S.pneumoniae R6 %3D spr0183%3B identified by match to protein family HMM PF01228%3B match to protein family HMM PF03477%3B match to protein family HMM TIGR02487;gbkey=CDS;gene=nrdD;locus_tag=SPD_0187;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=ABJ55183.1;transl_table=11
CP000410.2	Genbank	gene	193397	193537	.	+	.	ID=gene-SPD_0188;Name=SPD_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0188
CP000410.2	Genbank	CDS	193397	193537	.	+	0	ID=cds-ABJ54155.1;Parent=gene-SPD_0188;Dbxref=NCBI_GP:ABJ54155.1;Name=ABJ54155.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0203;gbkey=CDS;locus_tag=SPD_0188;product=hypothetical protein;protein_id=ABJ54155.1;transl_table=11
CP000410.2	Genbank	gene	193581	194087	.	+	.	ID=gene-SPD_0189;Name=SPD_0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0189
CP000410.2	Genbank	CDS	193581	194087	.	+	0	ID=cds-ABJ55518.1;Parent=gene-SPD_0189;Dbxref=NCBI_GP:ABJ55518.1;Name=ABJ55518.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0204%3B equivalent gene in S.pneumoniae R6 %3D spr0184%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0189;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55518.1;transl_table=11
CP000410.2	Genbank	gene	194080	194670	.	+	.	ID=gene-SPD_0190;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=SPD_0190
CP000410.2	Genbank	CDS	194080	194670	.	+	0	ID=cds-ABJ54741.1;Parent=gene-SPD_0190;Dbxref=NCBI_GP:ABJ54741.1;Name=ABJ54741.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0205%3B equivalent gene in S.pneumoniae R6 %3D spr0185%3B identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02491;gbkey=CDS;gene=nrdG;locus_tag=SPD_0190;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=ABJ54741.1;transl_table=11
CP000410.2	Genbank	gene	194667	195284	.	+	.	ID=gene-SPD_0191;Name=SPD_0191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0191
CP000410.2	Genbank	CDS	194667	195284	.	+	0	ID=cds-ABJ55284.1;Parent=gene-SPD_0191;Dbxref=NCBI_GP:ABJ55284.1;Name=ABJ55284.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0207%3B equivalent gene in S.pneumoniae R6 %3D spr0186%3B identified by match to protein family HMM PF00485;gbkey=CDS;locus_tag=SPD_0191;product=hypothetical protein;protein_id=ABJ55284.1;transl_table=11
CP000410.2	Genbank	gene	195551	195859	.	+	.	ID=gene-SPD_0192;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=SPD_0192
CP000410.2	Genbank	CDS	195551	195859	.	+	0	ID=cds-ABJ54959.1;Parent=gene-SPD_0192;Dbxref=NCBI_GP:ABJ54959.1;Name=ABJ54959.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0208%3B equivalent gene in S.pneumoniae R6 %3D spr0187%3B identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049;gbkey=CDS;gene=rpsJ;locus_tag=SPD_0192;product=ribosomal protein S10;protein_id=ABJ54959.1;transl_table=11
CP000410.2	Genbank	gene	196076	196702	.	+	.	ID=gene-SPD_0193;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=SPD_0193
CP000410.2	Genbank	CDS	196076	196702	.	+	0	ID=cds-ABJ55021.1;Parent=gene-SPD_0193;Dbxref=NCBI_GP:ABJ55021.1;Name=ABJ55021.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0209%3B equivalent gene in S.pneumoniae R6 %3D spr0188%3B identified by match to protein family HMM PF00297;gbkey=CDS;gene=rplC;locus_tag=SPD_0193;product=ribosomal protein L3;protein_id=ABJ55021.1;transl_table=11
CP000410.2	Genbank	gene	196727	197350	.	+	.	ID=gene-SPD_0194;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SPD_0194
CP000410.2	Genbank	CDS	196727	197350	.	+	0	ID=cds-ABJ53662.1;Parent=gene-SPD_0194;Dbxref=NCBI_GP:ABJ53662.1;Name=ABJ53662.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0210%3B equivalent gene in S.pneumoniae R6 %3D spr0189%3B identified by match to protein family HMM PF00573;gbkey=CDS;gene=rplD;locus_tag=SPD_0194;product=ribosomal protein L4;protein_id=ABJ53662.1;transl_table=11
CP000410.2	Genbank	gene	197350	197646	.	+	.	ID=gene-SPD_0195;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SPD_0195
CP000410.2	Genbank	CDS	197350	197646	.	+	0	ID=cds-ABJ54126.1;Parent=gene-SPD_0195;Dbxref=NCBI_GP:ABJ54126.1;Name=ABJ54126.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0211%3B equivalent gene in S.pneumoniae R6 %3D spr0190%3B identified by match to protein family HMM PF00276;gbkey=CDS;gene=rplW;locus_tag=SPD_0195;product=ribosomal protein L23;protein_id=ABJ54126.1;transl_table=11
CP000410.2	Genbank	gene	197664	198497	.	+	.	ID=gene-SPD_0196;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=SPD_0196
CP000410.2	Genbank	CDS	197664	198497	.	+	0	ID=cds-ABJ53934.1;Parent=gene-SPD_0196;Dbxref=NCBI_GP:ABJ53934.1;Name=ABJ53934.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0212%3B equivalent gene in S.pneumoniae R6 %3D spr0191%3B identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171;gbkey=CDS;gene=rplB;locus_tag=SPD_0196;product=ribosomal protein L2;protein_id=ABJ53934.1;transl_table=11
CP000410.2	Genbank	gene	198601	198882	.	+	.	ID=gene-SPD_0197;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=SPD_0197
CP000410.2	Genbank	CDS	198601	198882	.	+	0	ID=cds-ABJ54408.1;Parent=gene-SPD_0197;Dbxref=NCBI_GP:ABJ54408.1;Name=ABJ54408.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0213%3B equivalent gene in S.pneumoniae R6 %3D spr0192%3B identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050;gbkey=CDS;gene=rpsS;locus_tag=SPD_0197;product=ribosomal protein S19;protein_id=ABJ54408.1;transl_table=11
CP000410.2	Genbank	gene	198894	199238	.	+	.	ID=gene-SPD_0198;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=SPD_0198
CP000410.2	Genbank	CDS	198894	199238	.	+	0	ID=cds-ABJ55492.1;Parent=gene-SPD_0198;Dbxref=NCBI_GP:ABJ55492.1;Name=ABJ55492.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0214%3B equivalent gene in S.pneumoniae R6 %3D spr0194%3B identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044;gbkey=CDS;gene=rplV;locus_tag=SPD_0198;product=ribosomal protein L22;protein_id=ABJ55492.1;transl_table=11
CP000410.2	Genbank	gene	199251	199904	.	+	.	ID=gene-SPD_0199;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=SPD_0199
CP000410.2	Genbank	CDS	199251	199904	.	+	0	ID=cds-ABJ53698.1;Parent=gene-SPD_0199;Dbxref=NCBI_GP:ABJ53698.1;Name=ABJ53698.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0215%3B equivalent gene in S.pneumoniae R6 %3D spr0195%3B identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009;gbkey=CDS;gene=rpsC;locus_tag=SPD_0199;product=ribosomal protein S3;protein_id=ABJ53698.1;transl_table=11
CP000410.2	Genbank	gene	199908	200321	.	+	.	ID=gene-SPD_0200;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=SPD_0200
CP000410.2	Genbank	CDS	199908	200321	.	+	0	ID=cds-ABJ53923.1;Parent=gene-SPD_0200;Dbxref=NCBI_GP:ABJ53923.1;Name=ABJ53923.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0216%3B equivalent gene in S.pneumoniae R6 %3D spr0196%3B identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164;gbkey=CDS;gene=rplP;locus_tag=SPD_0200;product=ribosomal protein L16;protein_id=ABJ53923.1;transl_table=11
CP000410.2	Genbank	gene	200331	200537	.	+	.	ID=gene-SPD_0201;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=SPD_0201
CP000410.2	Genbank	CDS	200331	200537	.	+	0	ID=cds-ABJ55234.1;Parent=gene-SPD_0201;Dbxref=NCBI_GP:ABJ55234.1;Name=ABJ55234.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0217%3B equivalent gene in S.pneumoniae R6 %3D spr0197%3B identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012;gbkey=CDS;gene=rpmC;locus_tag=SPD_0201;product=ribosomal protein L29;protein_id=ABJ55234.1;transl_table=11
CP000410.2	Genbank	gene	200562	200822	.	+	.	ID=gene-SPD_0202;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=SPD_0202
CP000410.2	Genbank	CDS	200562	200822	.	+	0	ID=cds-ABJ54151.1;Parent=gene-SPD_0202;Dbxref=NCBI_GP:ABJ54151.1;Name=ABJ54151.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0218%3B equivalent gene in S.pneumoniae R6 %3D spr0198%3B identified by match to protein family HMM PF00366;gbkey=CDS;gene=rpsQ;locus_tag=SPD_0202;product=ribosomal protein S17;protein_id=ABJ54151.1;transl_table=11
CP000410.2	Genbank	gene	200848	201216	.	+	.	ID=gene-SPD_0203;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=SPD_0203
CP000410.2	Genbank	CDS	200848	201216	.	+	0	ID=cds-ABJ55322.1;Parent=gene-SPD_0203;Dbxref=NCBI_GP:ABJ55322.1;Name=ABJ55322.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0219%3B equivalent gene in S.pneumoniae R6 %3D spr0199%3B identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067;gbkey=CDS;gene=rplN;locus_tag=SPD_0203;product=ribosomal protein L14;protein_id=ABJ55322.1;transl_table=11
CP000410.2	Genbank	gene	201294	201599	.	+	.	ID=gene-SPD_0204;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=SPD_0204
CP000410.2	Genbank	CDS	201294	201599	.	+	0	ID=cds-ABJ54346.1;Parent=gene-SPD_0204;Dbxref=NCBI_GP:ABJ54346.1;Name=ABJ54346.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0220%3B equivalent gene in S.pneumoniae R6 %3D spr0200%3B identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079;gbkey=CDS;gene=rplX;locus_tag=SPD_0204;product=ribosomal protein L24;protein_id=ABJ54346.1;transl_table=11
CP000410.2	Genbank	gene	201623	202165	.	+	.	ID=gene-SPD_0205;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=SPD_0205
CP000410.2	Genbank	CDS	201623	202165	.	+	0	ID=cds-ABJ53730.1;Parent=gene-SPD_0205;Dbxref=NCBI_GP:ABJ53730.1;Name=ABJ53730.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0221%3B equivalent gene in S.pneumoniae R6 %3D spr0201%3B identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673;gbkey=CDS;gene=rplE;locus_tag=SPD_0205;product=ribosomal protein L5;protein_id=ABJ53730.1;transl_table=11
CP000410.2	Genbank	gene	202183	202452	.	+	.	ID=gene-SPD_0206;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SPD_0206
CP000410.2	Genbank	CDS	202183	202452	.	+	0	ID=cds-ABJ54607.1;Parent=gene-SPD_0206;Dbxref=NCBI_GP:ABJ54607.1;Name=ABJ54607.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0222%3B equivalent gene in S.pneumoniae R6 %3D spr0202%3B identified by match to protein family HMM PF00253;gbkey=CDS;gene=rpsN;locus_tag=SPD_0206;product=ribosomal protein S14;protein_id=ABJ54607.1;transl_table=11
CP000410.2	Genbank	gene	202737	203135	.	+	.	ID=gene-SPD_0207;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=SPD_0207
CP000410.2	Genbank	CDS	202737	203135	.	+	0	ID=cds-ABJ54001.1;Parent=gene-SPD_0207;Dbxref=NCBI_GP:ABJ54001.1;Name=ABJ54001.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0224%3B equivalent gene in S.pneumoniae R6 %3D spr0203%3B identified by match to protein family HMM PF00410;gbkey=CDS;gene=rpsH;locus_tag=SPD_0207;product=ribosomal protein S8;protein_id=ABJ54001.1;transl_table=11
CP000410.2	Genbank	gene	203327	203863	.	+	.	ID=gene-SPD_0208;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=SPD_0208
CP000410.2	Genbank	CDS	203327	203863	.	+	0	ID=cds-ABJ55236.1;Parent=gene-SPD_0208;Dbxref=NCBI_GP:ABJ55236.1;Name=ABJ55236.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0225%3B equivalent gene in S.pneumoniae R6 %3D spr0204%3B identified by match to protein family HMM PF00347;gbkey=CDS;gene=rplF;locus_tag=SPD_0208;product=ribosomal protein L6;protein_id=ABJ55236.1;transl_table=11
CP000410.2	Genbank	gene	203947	204303	.	+	.	ID=gene-SPD_0209;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=SPD_0209
CP000410.2	Genbank	CDS	203947	204303	.	+	0	ID=cds-ABJ54167.1;Parent=gene-SPD_0209;Dbxref=NCBI_GP:ABJ54167.1;Name=ABJ54167.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0226%3B equivalent gene in S.pneumoniae R6 %3D spr0205%3B identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060;gbkey=CDS;gene=rplR;locus_tag=SPD_0209;product=ribosomal protein L18;protein_id=ABJ54167.1;transl_table=11
CP000410.2	Genbank	gene	204321	204815	.	+	.	ID=gene-SPD_0210;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=SPD_0210
CP000410.2	Genbank	CDS	204321	204815	.	+	0	ID=cds-ABJ53791.1;Parent=gene-SPD_0210;Dbxref=NCBI_GP:ABJ53791.1;Name=ABJ53791.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0227%3B equivalent gene in S.pneumoniae R6 %3D spr0206%3B identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021;gbkey=CDS;gene=rpsE;locus_tag=SPD_0210;product=ribosomal protein S5;protein_id=ABJ53791.1;transl_table=11
CP000410.2	Genbank	gene	204829	205011	.	+	.	ID=gene-SPD_0211;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SPD_0211
CP000410.2	Genbank	CDS	204829	205011	.	+	0	ID=cds-ABJ55032.1;Parent=gene-SPD_0211;Dbxref=NCBI_GP:ABJ55032.1;Name=ABJ55032.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0228%3B equivalent gene in S.pneumoniae R6 %3D spr0207%3B identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308;gbkey=CDS;gene=rpmD;locus_tag=SPD_0211;product=ribosomal protein L30;protein_id=ABJ55032.1;transl_table=11
CP000410.2	Genbank	gene	205156	205596	.	+	.	ID=gene-SPD_0212;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=SPD_0212
CP000410.2	Genbank	CDS	205156	205596	.	+	0	ID=cds-ABJ53681.1;Parent=gene-SPD_0212;Dbxref=NCBI_GP:ABJ53681.1;Name=ABJ53681.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0229%3B equivalent gene in S.pneumoniae R6 %3D spr0208%3B identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071;gbkey=CDS;gene=rplO;locus_tag=SPD_0212;product=ribosomal protein L15;protein_id=ABJ53681.1;transl_table=11
CP000410.2	Genbank	gene	205609	206919	.	+	.	ID=gene-SPD_0213;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SPD_0213
CP000410.2	Genbank	CDS	205609	206919	.	+	0	ID=cds-ABJ55211.1;Parent=gene-SPD_0213;Dbxref=NCBI_GP:ABJ55211.1;Name=ABJ55211.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0230%3B equivalent gene in S.pneumoniae R6 %3D spr0209%3B identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967;gbkey=CDS;gene=secY;locus_tag=SPD_0213;product=preprotein translocase%2C SecY subunit;protein_id=ABJ55211.1;transl_table=11
CP000410.2	Genbank	gene	207070	207708	.	+	.	ID=gene-SPD_0214;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SPD_0214
CP000410.2	Genbank	CDS	207070	207708	.	+	0	ID=cds-ABJ54173.1;Parent=gene-SPD_0214;Dbxref=NCBI_GP:ABJ54173.1;Name=ABJ54173.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0231%3B equivalent gene in S.pneumoniae R6 %3D spr0210%3B identified by match to protein family HMM PF00406%3B match to protein family HMM TIGR01351;gbkey=CDS;gene=adk;locus_tag=SPD_0214;product=adenylate kinase;protein_id=ABJ54173.1;transl_table=11
CP000410.2	Genbank	gene	207825	208043	.	+	.	ID=gene-SPD_0215;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=SPD_0215
CP000410.2	Genbank	CDS	207825	208043	.	+	0	ID=cds-ABJ55413.1;Parent=gene-SPD_0215;Dbxref=NCBI_GP:ABJ55413.1;Name=ABJ55413.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0232%3B equivalent gene in S.pneumoniae R6 %3D spr0211%3B identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008;gbkey=CDS;gene=infA;locus_tag=SPD_0215;product=translation initiation factor IF-1;protein_id=ABJ55413.1;transl_table=11
CP000410.2	Genbank	gene	208202	208567	.	+	.	ID=gene-SPD_0216;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=SPD_0216
CP000410.2	Genbank	CDS	208202	208567	.	+	0	ID=cds-ABJ54343.1;Parent=gene-SPD_0216;Dbxref=NCBI_GP:ABJ54343.1;Name=ABJ54343.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0234%3B equivalent gene in S.pneumoniae R6 %3D spr0213%3B identified by match to protein family HMM PF00416;gbkey=CDS;gene=rpsM;locus_tag=SPD_0216;product=ribosomal protein S13;protein_id=ABJ54343.1;transl_table=11
CP000410.2	Genbank	gene	208585	208968	.	+	.	ID=gene-SPD_0217;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=SPD_0217
CP000410.2	Genbank	CDS	208585	208968	.	+	0	ID=cds-ABJ53737.1;Parent=gene-SPD_0217;Dbxref=NCBI_GP:ABJ53737.1;Name=ABJ53737.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0235%3B equivalent gene in S.pneumoniae R6 %3D spr0214%3B identified by match to protein family HMM PF00411;gbkey=CDS;gene=rpsK;locus_tag=SPD_0217;product=ribosomal protein S11;protein_id=ABJ53737.1;transl_table=11
CP000410.2	Genbank	gene	209011	209946	.	+	.	ID=gene-SPD_0218;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=SPD_0218
CP000410.2	Genbank	CDS	209011	209946	.	+	0	ID=cds-ABJ54589.1;Parent=gene-SPD_0218;Dbxref=NCBI_GP:ABJ54589.1;Name=ABJ54589.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0236%3B equivalent gene in S.pneumoniae R6 %3D spr0215%3B identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027;gbkey=CDS;gene=rpoA;locus_tag=SPD_0218;product=DNA-directed RNA polymerase%2C alpha subunit;protein_id=ABJ54589.1;transl_table=11
CP000410.2	Genbank	gene	209958	210344	.	+	.	ID=gene-SPD_0219;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SPD_0219
CP000410.2	Genbank	CDS	209958	210344	.	+	0	ID=cds-ABJ53743.1;Parent=gene-SPD_0219;Dbxref=NCBI_GP:ABJ53743.1;Name=ABJ53743.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0237%3B equivalent gene in S.pneumoniae R6 %3D spr0216%3B identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059;gbkey=CDS;gene=rplQ;locus_tag=SPD_0219;product=ribosomal protein L17;protein_id=ABJ53743.1;transl_table=11
CP000410.2	Genbank	gene	210609	210875	.	+	.	ID=gene-SPD_0220;Name=SPD_0220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0220
CP000410.2	Genbank	CDS	210609	210875	.	+	0	ID=cds-ABJ54940.1;Parent=gene-SPD_0220;Dbxref=NCBI_GP:ABJ54940.1;Name=ABJ54940.1;Note=Contains 1 ACT domain. equivalent gene in S.pneumoniae TIGR4 %3D SP0238%3B equivalent gene in S.pneumoniae R6 %3D spr0217%3B identified by match to protein family HMM PF01842;gbkey=CDS;locus_tag=SPD_0220;product=hypothetical protein;protein_id=ABJ54940.1;transl_table=11
CP000410.2	Genbank	pseudogene	210885	212223	.	+	.	ID=gene-SPD_0221;Name=SPD_0221;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0239%3B equivalent gene in S.pneumoniae R6 %3D spr0218%3B conserved hypothetical protein%2C FRAMESHIFT%3B identified by match to protein family HMM PF05167;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0221;pseudo=true
CP000410.2	Genbank	gene	212467	213159	.	+	.	ID=gene-SPD_0222;Name=SPD_0222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0222
CP000410.2	Genbank	CDS	212467	213159	.	+	0	ID=cds-ABJ54783.1;Parent=gene-SPD_0222;Dbxref=NCBI_GP:ABJ54783.1;Name=ABJ54783.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0240%3B equivalent gene in S.pneumoniae R6 %3D spr0219%3B identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=SPD_0222;product=phosphoglycerate mutase family protein;protein_id=ABJ54783.1;transl_table=11
CP000410.2	Genbank	gene	213262	214254	.	-	.	ID=gene-SPD_0223;Name=SPD_0223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0223
CP000410.2	Genbank	CDS	213262	214254	.	-	0	ID=cds-ABJ53924.1;Parent=gene-SPD_0223;Dbxref=NCBI_GP:ABJ53924.1;Name=ABJ53924.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0220%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_0223;product=iron(III) ABC transporter%2C permease protein;protein_id=ABJ53924.1;transl_table=11
CP000410.2	Genbank	gene	214281	214907	.	-	.	ID=gene-SPD_0224;Name=SPD_0224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0224
CP000410.2	Genbank	CDS	214281	214907	.	-	0	ID=cds-ABJ55022.1;Parent=gene-SPD_0224;Dbxref=NCBI_GP:ABJ55022.1;Name=ABJ55022.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0221;gbkey=CDS;locus_tag=SPD_0224;product=iron(III) ABC transporter%2C permease protein;protein_id=ABJ55022.1;transl_table=11
CP000410.2	Genbank	gene	214897	215988	.	-	.	ID=gene-SPD_0225;Name=SPD_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0225
CP000410.2	Genbank	CDS	214897	215988	.	-	0	ID=cds-ABJ55110.1;Parent=gene-SPD_0225;Dbxref=NCBI_GP:ABJ55110.1;Name=ABJ55110.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0242%3B equivalent gene in S.pneumoniae R6 %3D spr0222%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0225;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ55110.1;transl_table=11
CP000410.2	Genbank	gene	216001	216369	.	-	.	ID=gene-SPD_0226;Name=SPD_0226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0226
CP000410.2	Genbank	CDS	216001	216369	.	-	0	ID=cds-ABJ54112.1;Parent=gene-SPD_0226;Dbxref=NCBI_GP:ABJ54112.1;Name=ABJ54112.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0243%3B equivalent gene in S.pneumoniae R6 %3D spr0223;gbkey=CDS;locus_tag=SPD_0226;product=iron ABC transporter%2C iron-binding protein;protein_id=ABJ54112.1;transl_table=11
CP000410.2	Genbank	gene	216514	216708	.	-	.	ID=gene-SPD_0227;Name=SPD_0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0227
CP000410.2	Genbank	CDS	216514	216708	.	-	0	ID=cds-ABJ55269.1;Parent=gene-SPD_0227;Dbxref=NCBI_GP:ABJ55269.1;Name=ABJ55269.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0243%3B equivalent gene in S.pneumoniae R6 %3D spr0224;gbkey=CDS;locus_tag=SPD_0227;product=iron(III) ABC transporter%2C iron-binding protein;protein_id=ABJ55269.1;transl_table=11
CP000410.2	Genbank	gene	217340	217537	.	-	.	ID=gene-SPD_0228;Name=SPD_0228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0228
CP000410.2	Genbank	CDS	217340	217537	.	-	0	ID=cds-ABJ54440.1;Parent=gene-SPD_0228;Dbxref=NCBI_GP:ABJ54440.1;Name=ABJ54440.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0225%3B identified by match to protein family HMM PF00165;gbkey=CDS;locus_tag=SPD_0228;product=transcriptional regulator%2C AraC family protein;protein_id=ABJ54440.1;transl_table=11
CP000410.2	Genbank	gene	217612	218388	.	-	.	ID=gene-SPD_0229;Name=SPD_0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0229
CP000410.2	Genbank	CDS	217612	218388	.	-	0	ID=cds-ABJ55482.1;Parent=gene-SPD_0229;Dbxref=NCBI_GP:ABJ55482.1;Name=ABJ55482.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0245%3B equivalent gene in S.pneumoniae R6 %3D spr0226%3B identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02494;gbkey=CDS;locus_tag=SPD_0229;product=glycyl-radical enzyme activating protein family protein;protein_id=ABJ55482.1;transl_table=11
CP000410.2	Genbank	gene	218510	219256	.	+	.	ID=gene-SPD_0230;Name=SPD_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0230
CP000410.2	Genbank	CDS	218510	219256	.	+	0	ID=cds-ABJ54588.1;Parent=gene-SPD_0230;Dbxref=NCBI_GP:ABJ54588.1;Name=ABJ54588.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0246%3B equivalent gene in S.pneumoniae R6 %3D spr0227%3B identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;locus_tag=SPD_0230;product=transcriptional regulator%2C DeoR family protein;protein_id=ABJ54588.1;transl_table=11
CP000410.2	Genbank	gene	219269	220249	.	+	.	ID=gene-SPD_0231;Name=SPD_0231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0231
CP000410.2	Genbank	CDS	219269	220249	.	+	0	ID=cds-ABJ55498.1;Parent=gene-SPD_0231;Dbxref=NCBI_GP:ABJ55498.1;Name=ABJ55498.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0247%3B equivalent gene in S.pneumoniae R6 %3D spr0228%3B identified by match to protein family HMM PF04198;gbkey=CDS;locus_tag=SPD_0231;product=transcriptional activator;protein_id=ABJ55498.1;transl_table=11
CP000410.2	Genbank	gene	220444	220764	.	+	.	ID=gene-SPD_0232;Name=SPD_0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0232
CP000410.2	Genbank	CDS	220444	220764	.	+	0	ID=cds-ABJ54988.1;Parent=gene-SPD_0232;Dbxref=NCBI_GP:ABJ54988.1;Name=ABJ54988.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0248%3B equivalent gene in S.pneumoniae R6 %3D spr0229%3B identified by match to protein family HMM PF02255;gbkey=CDS;locus_tag=SPD_0232;product=PTS system%2C IIA component;protein_id=ABJ54988.1;transl_table=11
CP000410.2	Genbank	gene	220810	221118	.	+	.	ID=gene-SPD_0233;Name=SPD_0233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0233
CP000410.2	Genbank	CDS	220810	221118	.	+	0	ID=cds-ABJ53754.1;Parent=gene-SPD_0233;Dbxref=NCBI_GP:ABJ53754.1;Name=ABJ53754.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0249%3B equivalent gene in S.pneumoniae R6 %3D spr0230%3B identified by match to protein family HMM PF02302;gbkey=CDS;locus_tag=SPD_0233;product=PTS system%2C IIB component;protein_id=ABJ53754.1;transl_table=11
CP000410.2	Genbank	gene	221135	222433	.	+	.	ID=gene-SPD_0234;Name=SPD_0234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0234
CP000410.2	Genbank	CDS	221135	222433	.	+	0	ID=cds-ABJ54992.1;Parent=gene-SPD_0234;Dbxref=NCBI_GP:ABJ54992.1;Name=ABJ54992.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0250%3B equivalent gene in S.pneumoniae R6 %3D spr0231%3B identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410;gbkey=CDS;locus_tag=SPD_0234;product=PTS system%2C IIC component;protein_id=ABJ54992.1;transl_table=11
CP000410.2	Genbank	gene	222584	225022	.	+	.	ID=gene-SPD_0235;Name=pfl;gbkey=Gene;gene=pfl;gene_biotype=protein_coding;locus_tag=SPD_0235
CP000410.2	Genbank	CDS	222584	225022	.	+	0	ID=cds-ABJ53873.1;Parent=gene-SPD_0235;Dbxref=NCBI_GP:ABJ53873.1;Name=ABJ53873.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0251%3B equivalent gene in S.pneumoniae R6 %3D spr0232%3B identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01774;gbkey=CDS;gene=pfl;locus_tag=SPD_0235;product=pyruvate formate-lyase;protein_id=ABJ53873.1;transl_table=11
CP000410.2	Genbank	gene	225041	225709	.	+	.	ID=gene-SPD_0236;Name=talC;gbkey=Gene;gene=talC;gene_biotype=protein_coding;locus_tag=SPD_0236
CP000410.2	Genbank	CDS	225041	225709	.	+	0	ID=cds-ABJ55233.1;Parent=gene-SPD_0236;Dbxref=NCBI_GP:ABJ55233.1;Name=ABJ55233.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0252%3B equivalent gene in S.pneumoniae R6 %3D spr0233%3B identified by match to protein family HMM PF00923;gbkey=CDS;gene=talC;locus_tag=SPD_0236;product=transaldolase%2C putative;protein_id=ABJ55233.1;transl_table=11
CP000410.2	Genbank	gene	225727	226815	.	+	.	ID=gene-SPD_0237;Name=gldA;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=SPD_0237
CP000410.2	Genbank	CDS	225727	226815	.	+	0	ID=cds-ABJ54192.1;Parent=gene-SPD_0237;Dbxref=NCBI_GP:ABJ54192.1;Name=ABJ54192.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0253%3B equivalent gene in S.pneumoniae R6 %3D spr0234%3B identified by match to protein family HMM PF00465;gbkey=CDS;gene=gldA;locus_tag=SPD_0237;product=glycerol dehydrogenase;protein_id=ABJ54192.1;transl_table=11
CP000410.2	Genbank	gene	227270	229771	.	+	.	ID=gene-SPD_0238;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SPD_0238
CP000410.2	Genbank	CDS	227270	229771	.	+	0	ID=cds-ABJ55501.1;Parent=gene-SPD_0238;Dbxref=NCBI_GP:ABJ55501.1;Name=ABJ55501.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0254%3B equivalent gene in S.pneumoniae R6 %3D spr0235%3B identified by match to protein family HMM PF00133%3B match to protein family HMM TIGR00396;gbkey=CDS;gene=leuS;locus_tag=SPD_0238;product=leucyl-tRNA synthetase;protein_id=ABJ55501.1;transl_table=11
CP000410.2	Genbank	gene	229965	230660	.	+	.	ID=gene-SPD_0239;Name=SPD_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0239
CP000410.2	Genbank	CDS	229965	230660	.	+	0	ID=cds-ABJ54188.1;Parent=gene-SPD_0239;Dbxref=NCBI_GP:ABJ54188.1;Name=ABJ54188.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0255%3B equivalent gene in S.pneumoniae R6 %3D spr0236%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0239;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54188.1;transl_table=11
CP000410.2	Genbank	gene	230672	231088	.	+	.	ID=gene-SPD_0240;Name=SPD_0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0240
CP000410.2	Genbank	CDS	230672	231088	.	+	0	ID=cds-ABJ55460.1;Parent=gene-SPD_0240;Dbxref=NCBI_GP:ABJ55460.1;Name=ABJ55460.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0237%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0240;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55460.1;transl_table=11
CP000410.2	Genbank	gene	232129	233127	.	+	.	ID=gene-SPD_0241;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=SPD_0241
CP000410.2	Genbank	CDS	232129	233127	.	+	0	ID=cds-ABJ54102.1;Parent=gene-SPD_0241;Dbxref=NCBI_GP:ABJ54102.1;Name=ABJ54102.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0259%3B equivalent gene in S.pneumoniae R6 %3D spr0238%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635;gbkey=CDS;gene=ruvB;locus_tag=SPD_0241;product=Holliday junction DNA helicase RuvB;protein_id=ABJ54102.1;transl_table=11
CP000410.2	Genbank	gene	233108	233680	.	+	.	ID=gene-SPD_0242;Name=SPD_0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0242
CP000410.2	Genbank	CDS	233108	233680	.	+	0	ID=cds-ABJ54676.1;Parent=gene-SPD_0242;Dbxref=NCBI_GP:ABJ54676.1;Name=ABJ54676.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0260%3B equivalent gene in S.pneumoniae R6 %3D spr0239%3B identified by match to protein family HMM PF06042;gbkey=CDS;locus_tag=SPD_0242;product=hypothetical protein;protein_id=ABJ54676.1;transl_table=11
CP000410.2	Genbank	gene	233911	234669	.	+	.	ID=gene-SPD_0243;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=SPD_0243
CP000410.2	Genbank	CDS	233911	234669	.	+	0	ID=cds-ABJ53837.1;Parent=gene-SPD_0243;Dbxref=NCBI_GP:ABJ53837.1;Name=ABJ53837.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0261%3B equivalent gene in S.pneumoniae R6 %3D spr0240%3B identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055;gbkey=CDS;gene=uppS;locus_tag=SPD_0243;product=undecaprenyl diphosphate synthase;protein_id=ABJ53837.1;transl_table=11
CP000410.2	Genbank	gene	234678	235481	.	+	.	ID=gene-SPD_0244;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SPD_0244
CP000410.2	Genbank	CDS	234678	235481	.	+	0	ID=cds-ABJ54924.1;Parent=gene-SPD_0244;Dbxref=NCBI_GP:ABJ54924.1;Name=ABJ54924.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0262%3B equivalent gene in S.pneumoniae R6 %3D spr0241%3B identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA;locus_tag=SPD_0244;product=phosphatidate cytidylyltransferase;protein_id=ABJ54924.1;transl_table=11
CP000410.2	Genbank	gene	235503	236762	.	+	.	ID=gene-SPD_0245;Name=eep;gbkey=Gene;gene=eep;gene_biotype=protein_coding;locus_tag=SPD_0245
CP000410.2	Genbank	CDS	235503	236762	.	+	0	ID=cds-ABJ53996.1;Parent=gene-SPD_0245;Dbxref=NCBI_GP:ABJ53996.1;Name=ABJ53996.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0263%3B equivalent gene in S.pneumoniae R6 %3D spr0242%3B identified by match to protein family HMM PF02163%3B match to protein family HMM TIGR00054;gbkey=CDS;gene=eep;locus_tag=SPD_0245;product=zinc metalloprotease Eep;protein_id=ABJ53996.1;transl_table=11
CP000410.2	Genbank	gene	236775	238628	.	+	.	ID=gene-SPD_0246;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=SPD_0246
CP000410.2	Genbank	CDS	236775	238628	.	+	0	ID=cds-ABJ54259.1;Parent=gene-SPD_0246;Dbxref=NCBI_GP:ABJ54259.1;Name=ABJ54259.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0264%3B equivalent gene in S.pneumoniae R6 %3D spr0243%3B identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409;gbkey=CDS;gene=proS;locus_tag=SPD_0246;product=prolyl-tRNA synthetase;protein_id=ABJ54259.1;transl_table=11
CP000410.2	Genbank	gene	238728	240107	.	+	.	ID=gene-SPD_0247;Name=SPD_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0247
CP000410.2	Genbank	CDS	238728	240107	.	+	0	ID=cds-ABJ54846.1;Parent=gene-SPD_0247;Dbxref=NCBI_GP:ABJ54846.1;Name=ABJ54846.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0265%3B equivalent gene in S.pneumoniae R6 %3D spr0244%3B identified by match to protein family HMM PF00232;gbkey=CDS;locus_tag=SPD_0247;product=glycosyl hydrolase%2C family protein 1;protein_id=ABJ54846.1;transl_table=11
CP000410.2	Genbank	gene	240299	242107	.	+	.	ID=gene-SPD_0248;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=SPD_0248
CP000410.2	Genbank	CDS	240299	242107	.	+	0	ID=cds-ABJ54490.1;Parent=gene-SPD_0248;Dbxref=NCBI_GP:ABJ54490.1;Name=ABJ54490.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0266%3B equivalent gene in S.pneumoniae R6 %3D spr0245%3B identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135;gbkey=CDS;gene=glmS;locus_tag=SPD_0248;product=glucosamine--fructose-6-phosphate aminotransferase%2C isomerizing;protein_id=ABJ54490.1;transl_table=11
CP000410.2	Genbank	gene	242226	243275	.	+	.	ID=gene-SPD_0249;Name=SPD_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0249
CP000410.2	Genbank	CDS	242226	243275	.	+	0	ID=cds-ABJ53753.1;Parent=gene-SPD_0249;Dbxref=NCBI_GP:ABJ53753.1;Name=ABJ53753.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0267%3B equivalent gene in S.pneumoniae R6 %3D spr0246%3B identified by match to protein family HMM PF00296;gbkey=CDS;locus_tag=SPD_0249;product=hypothetical protein;protein_id=ABJ53753.1;transl_table=11
CP000410.2	Genbank	gene	243375	247145	.	-	.	ID=gene-SPD_0250;Name=SPD_0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0250
CP000410.2	Genbank	CDS	243375	247145	.	-	0	ID=cds-ABJ53695.1;Parent=gene-SPD_0250;Dbxref=NCBI_GP:ABJ53695.1;Name=ABJ53695.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0268%3B equivalent gene in S.pneumoniae R6 %3D spr0247%3B identified by match to protein family HMM PF00128%3B match to protein family HMM PF00746%3B match to protein family HMM PF02922%3B match to protein family HMM PF03714%3B match to protein family HMM PF04650%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168%3B match to protein family HMM TIGR02102;gbkey=CDS;locus_tag=SPD_0250;product=pullulanase%2C extracellular;protein_id=ABJ53695.1;transl_table=11
CP000410.2	Genbank	gene	247562	247975	.	+	.	ID=gene-SPD_0251;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=SPD_0251
CP000410.2	Genbank	CDS	247562	247975	.	+	0	ID=cds-ABJ54605.1;Parent=gene-SPD_0251;Dbxref=NCBI_GP:ABJ54605.1;Name=ABJ54605.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0271%3B equivalent gene in S.pneumoniae R6 %3D spr0248%3B identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981;gbkey=CDS;gene=rpsL;locus_tag=SPD_0251;product=ribosomal protein S12;protein_id=ABJ54605.1;transl_table=11
CP000410.2	Genbank	gene	247995	248465	.	+	.	ID=gene-SPD_0252;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=SPD_0252
CP000410.2	Genbank	CDS	247995	248465	.	+	0	ID=cds-ABJ55213.1;Parent=gene-SPD_0252;Dbxref=NCBI_GP:ABJ55213.1;Name=ABJ55213.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0272%3B equivalent gene in S.pneumoniae R6 %3D spr0249%3B identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029;gbkey=CDS;gene=rpsG;locus_tag=SPD_0252;product=ribosomal protein S7;protein_id=ABJ55213.1;transl_table=11
CP000410.2	Genbank	gene	248890	250971	.	+	.	ID=gene-SPD_0253;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SPD_0253
CP000410.2	Genbank	CDS	248890	250971	.	+	0	ID=cds-ABJ55048.1;Parent=gene-SPD_0253;Dbxref=NCBI_GP:ABJ55048.1;Name=ABJ55048.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0273%3B equivalent gene in S.pneumoniae R6 %3D spr0250%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=SPD_0253;product=translation elongation factor G;protein_id=ABJ55048.1;transl_table=11
CP000410.2	Genbank	gene	251075	255466	.	+	.	ID=gene-SPD_0254;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=SPD_0254
CP000410.2	Genbank	CDS	251075	255466	.	+	0	ID=cds-ABJ54142.1;Parent=gene-SPD_0254;Dbxref=NCBI_GP:ABJ54142.1;Name=ABJ54142.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0274%3B equivalent gene in S.pneumoniae R6 %3D spr0251%3B identified by match to protein family HMM PF00929%3B match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01405;gbkey=CDS;gene=polC;locus_tag=SPD_0254;product=DNA polymerase III%2C alpha subunit%2C Gram-positive type;protein_id=ABJ54142.1;transl_table=11
CP000410.2	Genbank	gene	255568	255831	.	+	.	ID=gene-SPD_0255;Name=SPD_0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0255
CP000410.2	Genbank	CDS	255568	255831	.	+	0	ID=cds-ABJ55182.1;Parent=gene-SPD_0255;Dbxref=NCBI_GP:ABJ55182.1;Name=ABJ55182.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0275%3B equivalent gene in S.pneumoniae R6 %3D spr0252%3B identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;locus_tag=SPD_0255;product=addiction module antitoxin%2C RelB/DinJ family protein%2C putative;protein_id=ABJ55182.1;transl_table=11
CP000410.2	Genbank	gene	255824	256102	.	+	.	ID=gene-SPD_0256;Name=SPD_0256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0256
CP000410.2	Genbank	CDS	255824	256102	.	+	0	ID=cds-ABJ54412.1;Parent=gene-SPD_0256;Dbxref=NCBI_GP:ABJ54412.1;Name=ABJ54412.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0276%3B equivalent gene in S.pneumoniae R6 %3D spr0253%3B identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=SPD_0256;product=conserved hypothetical protein TIGR00053;protein_id=ABJ54412.1;transl_table=11
CP000410.2	Genbank	gene	256123	256275	.	+	.	ID=gene-SPD_0257;Name=SPD_0257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0257
CP000410.2	Genbank	CDS	256123	256275	.	+	0	ID=cds-ABJ54747.1;Parent=gene-SPD_0257;Dbxref=NCBI_GP:ABJ54747.1;Name=ABJ54747.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0277;gbkey=CDS;locus_tag=SPD_0257;product=hypothetical protein;protein_id=ABJ54747.1;transl_table=11
CP000410.2	Genbank	gene	256297	257538	.	+	.	ID=gene-SPD_0258;Name=pepS;gbkey=Gene;gene=pepS;gene_biotype=protein_coding;locus_tag=SPD_0258
CP000410.2	Genbank	CDS	256297	257538	.	+	0	ID=cds-ABJ54948.1;Parent=gene-SPD_0258;Dbxref=NCBI_GP:ABJ54948.1;Name=ABJ54948.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0278%3B equivalent gene in S.pneumoniae R6 %3D spr0254%3B identified by match to protein family HMM PF02073;gbkey=CDS;gene=pepS;locus_tag=SPD_0258;product=aminopeptidase PepS;protein_id=ABJ54948.1;transl_table=11
CP000410.2	Genbank	gene	257548	257778	.	+	.	ID=gene-SPD_0259;Name=SPD_0259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0259
CP000410.2	Genbank	CDS	257548	257778	.	+	0	ID=cds-ABJ54646.1;Parent=gene-SPD_0259;Dbxref=NCBI_GP:ABJ54646.1;Name=ABJ54646.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0279%3B equivalent gene in S.pneumoniae R6 %3D spr0255%3B identified by match to protein family HMM PF04226;gbkey=CDS;locus_tag=SPD_0259;product=Transglycosylase associated protein;protein_id=ABJ54646.1;transl_table=11
CP000410.2	Genbank	gene	258091	258813	.	+	.	ID=gene-SPD_0260;Name=rsuA-1;gbkey=Gene;gene=rsuA-1;gene_biotype=protein_coding;locus_tag=SPD_0260
CP000410.2	Genbank	CDS	258091	258813	.	+	0	ID=cds-ABJ54344.1;Parent=gene-SPD_0260;Dbxref=NCBI_GP:ABJ54344.1;Name=ABJ54344.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0280%3B equivalent gene in S.pneumoniae R6 %3D spr0256%3B identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;gene=rsuA-1;locus_tag=SPD_0260;product=ribosomal small subunit pseudouridine synthase A;protein_id=ABJ54344.1;transl_table=11
CP000410.2	Genbank	gene	259030	260364	.	+	.	ID=gene-SPD_0261;Name=pepC;gbkey=Gene;gene=pepC;gene_biotype=protein_coding;locus_tag=SPD_0261
CP000410.2	Genbank	CDS	259030	260364	.	+	0	ID=cds-ABJ55209.1;Parent=gene-SPD_0261;Dbxref=NCBI_GP:ABJ55209.1;Name=ABJ55209.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0281%3B equivalent gene in S.pneumoniae R6 %3D spr0258%3B identified by match to protein family HMM PF03051;gbkey=CDS;gene=pepC;locus_tag=SPD_0261;product=aminopeptidase C;protein_id=ABJ55209.1;transl_table=11
CP000410.2	Genbank	gene	260420	261331	.	-	.	ID=gene-SPD_0262;Name=SPD_0262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0262
CP000410.2	Genbank	CDS	260420	261331	.	-	0	ID=cds-ABJ55251.1;Parent=gene-SPD_0262;Dbxref=NCBI_GP:ABJ55251.1;Name=ABJ55251.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0282%3B equivalent gene in S.pneumoniae R6 %3D spr0259%3B identified by match to protein family HMM PF03613%3B match to protein family HMM TIGR00828;gbkey=CDS;locus_tag=SPD_0262;product=PTS system%2C mannose/fructose/sorbose family protein%2C IID component;protein_id=ABJ55251.1;transl_table=11
CP000410.2	Genbank	gene	261355	262158	.	-	.	ID=gene-SPD_0263;Name=manM;gbkey=Gene;gene=manM;gene_biotype=protein_coding;locus_tag=SPD_0263
CP000410.2	Genbank	CDS	261355	262158	.	-	0	ID=cds-ABJ54159.1;Parent=gene-SPD_0263;Dbxref=NCBI_GP:ABJ54159.1;Name=ABJ54159.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0283%3B equivalent gene in S.pneumoniae R6 %3D spr0260%3B identified by match to protein family HMM PF03609;gbkey=CDS;gene=manM;locus_tag=SPD_0263;product=PTS system%2C mannose-specific IIC component;protein_id=ABJ54159.1;transl_table=11
CP000410.2	Genbank	gene	262186	263175	.	-	.	ID=gene-SPD_0264;Name=manL;gbkey=Gene;gene=manL;gene_biotype=protein_coding;locus_tag=SPD_0264
CP000410.2	Genbank	CDS	262186	263175	.	-	0	ID=cds-ABJ54088.1;Parent=gene-SPD_0264;Dbxref=NCBI_GP:ABJ54088.1;Name=ABJ54088.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0284%3B equivalent gene in S.pneumoniae R6 %3D spr0261%3B identified by match to protein family HMM PF03610%3B match to protein family HMM PF03830;gbkey=CDS;gene=manL;locus_tag=SPD_0264;product=PTS system%2C mannose-specific IIAB components;protein_id=ABJ54088.1;transl_table=11
CP000410.2	Genbank	gene	263408	264427	.	-	.	ID=gene-SPD_0265;Name=SPD_0265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0265
CP000410.2	Genbank	CDS	263408	264427	.	-	0	ID=cds-ABJ54815.1;Parent=gene-SPD_0265;Dbxref=NCBI_GP:ABJ54815.1;Name=ABJ54815.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0285%3B equivalent gene in S.pneumoniae R6 %3D spr0262%3B identified by match to protein family HMM PF00107;gbkey=CDS;locus_tag=SPD_0265;product=alcohol dehydrogenase%2C zinc-containing;protein_id=ABJ54815.1;transl_table=11
CP000410.2	Genbank	gene	264766	265578	.	-	.	ID=gene-SPD_0266;Name=SPD_0266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0266
CP000410.2	Genbank	CDS	264766	265578	.	-	0	ID=cds-ABJ54699.1;Parent=gene-SPD_0266;Dbxref=NCBI_GP:ABJ54699.1;Name=ABJ54699.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0286%3B equivalent gene in S.pneumoniae R6 %3D spr0263%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_0266;product=Cof family protein;protein_id=ABJ54699.1;transl_table=11
CP000410.2	Genbank	gene	265768	267186	.	+	.	ID=gene-SPD_0267;Name=SPD_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0267
CP000410.2	Genbank	CDS	265768	267186	.	+	0	ID=cds-ABJ53784.1;Parent=gene-SPD_0267;Dbxref=NCBI_GP:ABJ53784.1;Name=ABJ53784.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0287%3B equivalent gene in S.pneumoniae R6 %3D spr0264%3B identified by match to protein family HMM PF00860;gbkey=CDS;locus_tag=SPD_0267;product=xanthine/uracil permease family protein;protein_id=ABJ53784.1;transl_table=11
CP000410.2	Genbank	gene	267255	267947	.	+	.	ID=gene-SPD_0268;Name=SPD_0268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0268
CP000410.2	Genbank	CDS	267255	267947	.	+	0	ID=cds-ABJ54874.1;Parent=gene-SPD_0268;Dbxref=NCBI_GP:ABJ54874.1;Name=ABJ54874.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0288%3B equivalent gene in S.pneumoniae R6 %3D spr0265%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_0268;product=CAAX amino terminal protease family protein;protein_id=ABJ54874.1;transl_table=11
CP000410.2	Genbank	gene	268042	269016	.	+	.	ID=gene-SPD_0269;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SPD_0269
CP000410.2	Genbank	CDS	268042	269016	.	+	0	ID=cds-ABJ54949.1;Parent=gene-SPD_0269;Dbxref=NCBI_GP:ABJ54949.1;Name=ABJ54949.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0289%3B equivalent gene in S.pneumoniae R6 %3D spr0266%3B identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496;gbkey=CDS;gene=folP;locus_tag=SPD_0269;product=dihydropteroate synthase;protein_id=ABJ54949.1;transl_table=11
CP000410.2	Genbank	gene	269018	270340	.	+	.	ID=gene-SPD_0270;Name=SPD_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0270
CP000410.2	Genbank	CDS	269018	270340	.	+	0	ID=cds-ABJ55041.1;Parent=gene-SPD_0270;Dbxref=NCBI_GP:ABJ55041.1;Name=ABJ55041.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0290%3B equivalent gene in S.pneumoniae R6 %3D spr0267%3B identified by match to protein family HMM PF02875%3B match to protein family HMM TIGR01499;gbkey=CDS;locus_tag=SPD_0270;product=folylpolyglutamate synthase;protein_id=ABJ55041.1;transl_table=11
CP000410.2	Genbank	gene	270321	270875	.	+	.	ID=gene-SPD_0271;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SPD_0271
CP000410.2	Genbank	CDS	270321	270875	.	+	0	ID=cds-ABJ54241.1;Parent=gene-SPD_0271;Dbxref=NCBI_GP:ABJ54241.1;Name=ABJ54241.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0291%3B equivalent gene in S.pneumoniae R6 %3D spr0268%3B identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR00063;gbkey=CDS;gene=folE;locus_tag=SPD_0271;product=GTP cyclohydrolase I;protein_id=ABJ54241.1;transl_table=11
CP000410.2	Genbank	gene	270918	271730	.	+	.	ID=gene-SPD_0272;Name=sulD;gbkey=Gene;gene=sulD;gene_biotype=protein_coding;locus_tag=SPD_0272
CP000410.2	Genbank	CDS	270918	271730	.	+	0	ID=cds-ABJ55370.1;Parent=gene-SPD_0272;Dbxref=NCBI_GP:ABJ55370.1;Name=ABJ55370.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0292%3B equivalent gene in S.pneumoniae R6 %3D spr0269%3B identified by match to protein family HMM PF01288%3B match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526%3B match to protein family HMM TIGR01498;gbkey=CDS;gene=sulD;locus_tag=SPD_0272;product=bifunctional folate synthesis protein;protein_id=ABJ55370.1;transl_table=11
CP000410.2	Genbank	gene	271775	272146	.	-	.	ID=gene-SPD_0273;Name=SPD_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0273
CP000410.2	Genbank	CDS	271775	272146	.	-	0	ID=cds-ABJ54487.1;Parent=gene-SPD_0273;Dbxref=NCBI_GP:ABJ54487.1;Name=ABJ54487.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0293%3B equivalent gene in S.pneumoniae R6 %3D spr0270;gbkey=CDS;locus_tag=SPD_0273;product=hypothetical protein;protein_id=ABJ54487.1;transl_table=11
CP000410.2	Genbank	gene	272449	272895	.	+	.	ID=gene-SPD_0274;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=SPD_0274
CP000410.2	Genbank	CDS	272449	272895	.	+	0	ID=cds-ABJ54467.1;Parent=gene-SPD_0274;Dbxref=NCBI_GP:ABJ54467.1;Name=ABJ54467.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0294%3B equivalent gene in S.pneumoniae R6 %3D spr0271%3B identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066;gbkey=CDS;gene=rplM;locus_tag=SPD_0274;product=ribosomal protein L13;protein_id=ABJ54467.1;transl_table=11
CP000410.2	Genbank	gene	272915	273307	.	+	.	ID=gene-SPD_0275;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=SPD_0275
CP000410.2	Genbank	CDS	272915	273307	.	+	0	ID=cds-ABJ55401.1;Parent=gene-SPD_0275;Dbxref=NCBI_GP:ABJ55401.1;Name=ABJ55401.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0295%3B equivalent gene in S.pneumoniae R6 %3D spr0272%3B identified by match to protein family HMM PF00380;gbkey=CDS;gene=rpsI;locus_tag=SPD_0275;product=ribosomal protein S9;protein_id=ABJ55401.1;transl_table=11
CP000410.2	Genbank	gene	273994	274359	.	+	.	ID=gene-SPD_0276;Name=SPD_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0276
CP000410.2	Genbank	CDS	273994	274359	.	+	0	ID=cds-ABJ54858.1;Parent=gene-SPD_0276;Dbxref=NCBI_GP:ABJ54858.1;Name=ABJ54858.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0302%3B equivalent gene in S.pneumoniae R6 %3D spr0275%3B identified by match to protein family HMM PF03992;gbkey=CDS;locus_tag=SPD_0276;product=hypothetical protein;protein_id=ABJ54858.1;transl_table=11
CP000410.2	Genbank	gene	274549	275985	.	+	.	ID=gene-SPD_0277;Name=bglA-1;gbkey=Gene;gene=bglA-1;gene_biotype=protein_coding;locus_tag=SPD_0277
CP000410.2	Genbank	CDS	274549	275985	.	+	0	ID=cds-ABJ53661.1;Parent=gene-SPD_0277;Dbxref=NCBI_GP:ABJ53661.1;Name=ABJ53661.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0303%3B equivalent gene in S.pneumoniae R6 %3D spr0276%3B identified by match to protein family HMM PF00232;gbkey=CDS;gene=bglA-1;locus_tag=SPD_0277;product=6- phospho-beta-glucosidase;protein_id=ABJ53661.1;transl_table=11
CP000410.2	Genbank	gene	276037	276276	.	+	.	ID=gene-SPD_0278;Name=SPD_0278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0278
CP000410.2	Genbank	CDS	276037	276276	.	+	0	ID=cds-ABJ53972.1;Parent=gene-SPD_0278;Dbxref=NCBI_GP:ABJ53972.1;Name=ABJ53972.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0304%3B equivalent gene in S.pneumoniae R6 %3D spr0277%3B identified by match to protein family HMM PF03083;gbkey=CDS;locus_tag=SPD_0278;product=hypothetical protein;protein_id=ABJ53972.1;transl_table=11
CP000410.2	Genbank	gene	276406	276720	.	+	.	ID=gene-SPD_0279;Name=SPD_0279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0279
CP000410.2	Genbank	CDS	276406	276720	.	+	0	ID=cds-ABJ55373.1;Parent=gene-SPD_0279;Dbxref=NCBI_GP:ABJ55373.1;Name=ABJ55373.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0305%3B equivalent gene in S.pneumoniae R6 %3D spr0278%3B identified by match to protein family HMM PF02302;gbkey=CDS;locus_tag=SPD_0279;product=PTS system%2C IIB component;protein_id=ABJ55373.1;transl_table=11
CP000410.2	Genbank	gene	276844	278817	.	+	.	ID=gene-SPD_0280;Name=SPD_0280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0280
CP000410.2	Genbank	CDS	276844	278817	.	+	0	ID=cds-ABJ54823.1;Parent=gene-SPD_0280;Dbxref=NCBI_GP:ABJ54823.1;Name=ABJ54823.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0306%3B equivalent gene in S.pneumoniae R6 %3D spr0279%3B identified by match to protein family HMM PF00874%3B match to protein family HMM PF05043;gbkey=CDS;locus_tag=SPD_0280;product=transcriptional regulator%2C putative;protein_id=ABJ54823.1;transl_table=11
CP000410.2	Genbank	gene	278827	279141	.	+	.	ID=gene-SPD_0281;Name=SPD_0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0281
CP000410.2	Genbank	CDS	278827	279141	.	+	0	ID=cds-ABJ54026.1;Parent=gene-SPD_0281;Dbxref=NCBI_GP:ABJ54026.1;Name=ABJ54026.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0308%3B equivalent gene in S.pneumoniae R6 %3D spr0280%3B identified by match to protein family HMM PF02255;gbkey=CDS;locus_tag=SPD_0281;product=PTS system%2C IIA component;protein_id=ABJ54026.1;transl_table=11
CP000410.2	Genbank	gene	279160	279666	.	+	.	ID=gene-SPD_0282;Name=SPD_0282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0282
CP000410.2	Genbank	CDS	279160	279666	.	+	0	ID=cds-ABJ53797.1;Parent=gene-SPD_0282;Dbxref=NCBI_GP:ABJ53797.1;Name=ABJ53797.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0309%3B equivalent gene in S.pneumoniae R6 %3D spr0281;gbkey=CDS;locus_tag=SPD_0282;product=membrane protein%2C putative;protein_id=ABJ53797.1;transl_table=11
CP000410.2	Genbank	gene	279746	281092	.	+	.	ID=gene-SPD_0283;Name=SPD_0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0283
CP000410.2	Genbank	CDS	279746	281092	.	+	0	ID=cds-ABJ54842.1;Parent=gene-SPD_0283;Dbxref=NCBI_GP:ABJ54842.1;Name=ABJ54842.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0310%3B equivalent gene in S.pneumoniae R6 %3D spr0282%3B identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410;gbkey=CDS;locus_tag=SPD_0283;product=PTS system%2C IIC component;protein_id=ABJ54842.1;transl_table=11
CP000410.2	Genbank	gene	281474	281650	.	+	.	ID=gene-SPD_0284;Name=SPD_0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0284
CP000410.2	Genbank	CDS	281474	281650	.	+	0	ID=cds-ABJ54038.1;Parent=gene-SPD_0284;Dbxref=NCBI_GP:ABJ54038.1;Name=ABJ54038.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0311%3B equivalent gene in S.pneumoniae R6 %3D spr0283;gbkey=CDS;locus_tag=SPD_0284;product=hypothetical protein;protein_id=ABJ54038.1;transl_table=11
CP000410.2	Genbank	gene	282052	284265	.	+	.	ID=gene-SPD_0285;Name=SPD_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0285
CP000410.2	Genbank	CDS	282052	284265	.	+	0	ID=cds-ABJ54909.1;Parent=gene-SPD_0285;Dbxref=NCBI_GP:ABJ54909.1;Name=ABJ54909.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0312%3B equivalent gene in S.pneumoniae R6 %3D spr0284%3B identified by match to protein family HMM PF01055;gbkey=CDS;locus_tag=SPD_0285;product=glycosyl hydrolase%2C family protein 31;protein_id=ABJ54909.1;transl_table=11
CP000410.2	Genbank	gene	284487	284963	.	-	.	ID=gene-SPD_0286;Name=SPD_0286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0286
CP000410.2	Genbank	CDS	284487	284963	.	-	0	ID=cds-ABJ55146.1;Parent=gene-SPD_0286;Dbxref=NCBI_GP:ABJ55146.1;Name=ABJ55146.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0313%3B equivalent gene in S.pneumoniae R6 %3D spr0285%3B identified by match to protein family HMM PF00255;gbkey=CDS;locus_tag=SPD_0286;product=glutathione peroxidase;protein_id=ABJ55146.1;transl_table=11
CP000410.2	Genbank	gene	285186	288389	.	+	.	ID=gene-SPD_0287;Name=SPD_0287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0287
CP000410.2	Genbank	CDS	285186	288389	.	+	0	ID=cds-ABJ54273.1;Parent=gene-SPD_0287;Dbxref=NCBI_GP:ABJ54273.1;Name=ABJ54273.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0314%3B equivalent gene in S.pneumoniae R6 %3D spr0286%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF02018%3B match to protein family HMM PF02278%3B match to protein family HMM PF02884%3B match to protein family HMM PF08124%3B match to protein family HMM TIGR01167;gbkey=CDS;locus_tag=SPD_0287;product=hyaluronate lyase precursor;protein_id=ABJ54273.1;transl_table=11
CP000410.2	Genbank	pseudogene	288770	289158	.	+	.	ID=gene-SPD_0288;Name=SPD_0288;Note=IS200S%2C transposase%2C interruption;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0288;pseudo=true
CP000410.2	Genbank	gene	289533	290162	.	-	.	ID=gene-SPD_0289;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=SPD_0289
CP000410.2	Genbank	CDS	289533	290162	.	-	0	ID=cds-ABJ53866.1;Parent=gene-SPD_0289;Dbxref=NCBI_GP:ABJ53866.1;Name=ABJ53866.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0317%3B equivalent gene in S.pneumoniae R6 %3D spr0287%3B identified by match to protein family HMM PF01081%3B match to protein family HMM TIGR01182;gbkey=CDS;gene=eda;locus_tag=SPD_0289;product=4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase;protein_id=ABJ53866.1;transl_table=11
CP000410.2	Genbank	gene	290172	291173	.	-	.	ID=gene-SPD_0290;Name=SPD_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0290
CP000410.2	Genbank	CDS	290172	291173	.	-	0	ID=cds-ABJ54748.1;Parent=gene-SPD_0290;Dbxref=NCBI_GP:ABJ54748.1;Name=ABJ54748.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0318%3B equivalent gene in S.pneumoniae R6 %3D spr0288%3B identified by match to protein family HMM PF00294;gbkey=CDS;locus_tag=SPD_0290;product=carbohydrate kinase%2C PfkB family protein;protein_id=ABJ54748.1;transl_table=11
CP000410.2	Genbank	gene	291204	291845	.	-	.	ID=gene-SPD_0291;Name=SPD_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0291
CP000410.2	Genbank	CDS	291204	291845	.	-	0	ID=cds-ABJ53647.1;Parent=gene-SPD_0291;Dbxref=NCBI_GP:ABJ53647.1;Name=ABJ53647.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0319%3B equivalent gene in S.pneumoniae R6 %3D spr0289%3B identified by match to protein family HMM PF06562;gbkey=CDS;locus_tag=SPD_0291;product=ribose 5-phosphate isomerase%2C putative;protein_id=ABJ53647.1;transl_table=11
CP000410.2	Genbank	gene	291864	292679	.	-	.	ID=gene-SPD_0292;Name=SPD_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0292
CP000410.2	Genbank	CDS	291864	292679	.	-	0	ID=cds-ABJ55135.1;Parent=gene-SPD_0292;Dbxref=NCBI_GP:ABJ55135.1;Name=ABJ55135.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0320%3B equivalent gene in S.pneumoniae R6 %3D spr0290%3B identified by match to protein family HMM PF00106;gbkey=CDS;locus_tag=SPD_0292;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=ABJ55135.1;transl_table=11
CP000410.2	Genbank	gene	292950	293384	.	+	.	ID=gene-SPD_0293;Name=SPD_0293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0293
CP000410.2	Genbank	CDS	292950	293384	.	+	0	ID=cds-ABJ53854.1;Parent=gene-SPD_0293;Dbxref=NCBI_GP:ABJ53854.1;Name=ABJ53854.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0321%3B equivalent gene in S.pneumoniae R6 %3D spr0291%3B identified by match to protein family HMM PF03610;gbkey=CDS;locus_tag=SPD_0293;product=PTS system%2C IIA component;protein_id=ABJ53854.1;transl_table=11
CP000410.2	Genbank	gene	293396	294586	.	+	.	ID=gene-SPD_0294;Name=SPD_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0294
CP000410.2	Genbank	CDS	293396	294586	.	+	0	ID=cds-ABJ55382.1;Parent=gene-SPD_0294;Dbxref=NCBI_GP:ABJ55382.1;Name=ABJ55382.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0322%3B equivalent gene in S.pneumoniae R6 %3D spr0292%3B identified by match to protein family HMM PF07470;gbkey=CDS;locus_tag=SPD_0294;product=glucuronyl hydrolase;protein_id=ABJ55382.1;transl_table=11
CP000410.2	Genbank	gene	294597	295088	.	+	.	ID=gene-SPD_0295;Name=SPD_0295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0295
CP000410.2	Genbank	CDS	294597	295088	.	+	0	ID=cds-ABJ54119.1;Parent=gene-SPD_0295;Dbxref=NCBI_GP:ABJ54119.1;Name=ABJ54119.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0323%3B equivalent gene in S.pneumoniae R6 %3D spr0293%3B identified by match to protein family HMM PF03830;gbkey=CDS;locus_tag=SPD_0295;product=PTS system%2C IIB component;protein_id=ABJ54119.1;transl_table=11
CP000410.2	Genbank	gene	295103	295882	.	+	.	ID=gene-SPD_0296;Name=SPD_0296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0296
CP000410.2	Genbank	CDS	295103	295882	.	+	0	ID=cds-ABJ53700.1;Parent=gene-SPD_0296;Dbxref=NCBI_GP:ABJ53700.1;Name=ABJ53700.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0324%3B equivalent gene in S.pneumoniae R6 %3D spr0294%3B identified by match to protein family HMM PF03609;gbkey=CDS;locus_tag=SPD_0296;product=PTS system%2C IIC component;protein_id=ABJ53700.1;transl_table=11
CP000410.2	Genbank	gene	295869	296687	.	+	.	ID=gene-SPD_0297;Name=SPD_0297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0297
CP000410.2	Genbank	CDS	295869	296687	.	+	0	ID=cds-ABJ54383.1;Parent=gene-SPD_0297;Dbxref=NCBI_GP:ABJ54383.1;Name=ABJ54383.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0325%3B equivalent gene in S.pneumoniae R6 %3D spr0295%3B identified by match to protein family HMM PF03613;gbkey=CDS;locus_tag=SPD_0297;product=PTS system%2C IID component;protein_id=ABJ54383.1;transl_table=11
CP000410.2	Genbank	gene	296714	296980	.	+	.	ID=gene-SPD_0298;Name=yajC-1;gbkey=Gene;gene=yajC-1;gene_biotype=protein_coding;locus_tag=SPD_0298
CP000410.2	Genbank	CDS	296714	296980	.	+	0	ID=cds-ABJ53926.1;Parent=gene-SPD_0298;Dbxref=NCBI_GP:ABJ53926.1;Name=ABJ53926.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0326%3B equivalent gene in S.pneumoniae R6 %3D spr0296;gbkey=CDS;gene=yajC-1;locus_tag=SPD_0298;product=preprotein translocase%2C YajC subunit;protein_id=ABJ53926.1;transl_table=11
CP000410.2	Genbank	gene	297002	298903	.	+	.	ID=gene-SPD_0300;Name=SPD_0300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0300
CP000410.2	Genbank	CDS	297002	298903	.	+	0	ID=cds-ABJ55130.2;Parent=gene-SPD_0300;Dbxref=NCBI_GP:ABJ55130.2;Name=ABJ55130.2;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0327%3B equivalent gene in S.pneumoniae R6 %3D spr0297%3B identified by match to protein family HMM PF07940%3B also includes SPD_0299%3B equivalent gene in CP027540 %3D SPV_2141;gbkey=CDS;locus_tag=SPD_0300;product=oligohyaluronate lyase;protein_id=ABJ55130.2;transl_table=11
CP000410.2	Genbank	gene	298963	299964	.	+	.	ID=gene-SPD_0301;Name=regR;gbkey=Gene;gene=regR;gene_biotype=protein_coding;locus_tag=SPD_0301
CP000410.2	Genbank	CDS	298963	299964	.	+	0	ID=cds-ABJ53988.1;Parent=gene-SPD_0301;Dbxref=NCBI_GP:ABJ53988.1;Name=ABJ53988.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0330%3B equivalent gene in S.pneumoniae R6 %3D spr0298%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;gene=regR;locus_tag=SPD_0301;product=sugar binding transcriptional regulator RegR;protein_id=ABJ53988.1;transl_table=11
CP000410.2	Genbank	gene	300410	300652	.	-	.	ID=gene-SPD_0302;Name=SPD_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0302
CP000410.2	Genbank	CDS	300410	300652	.	-	0	ID=cds-ABJ54896.1;Parent=gene-SPD_0302;Dbxref=NCBI_GP:ABJ54896.1;Name=ABJ54896.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0300;gbkey=CDS;locus_tag=SPD_0302;product=hypothetical protein;protein_id=ABJ54896.1;transl_table=11
CP000410.2	Genbank	gene	300668	300862	.	-	.	ID=gene-SPD_0303;Name=SPD_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0303
CP000410.2	Genbank	CDS	300668	300862	.	-	0	ID=cds-ABJ53817.1;Parent=gene-SPD_0303;Dbxref=NCBI_GP:ABJ53817.1;Name=ABJ53817.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0333%3B equivalent gene in S.pneumoniae R6 %3D spr0301%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_0303;product=transcriptional regulator%2C putative;protein_id=ABJ53817.1;transl_table=11
CP000410.2	Genbank	gene	301028	301978	.	+	.	ID=gene-SPD_0304;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=SPD_0304
CP000410.2	Genbank	CDS	301028	301978	.	+	0	ID=cds-ABJ53738.1;Parent=gene-SPD_0304;Dbxref=NCBI_GP:ABJ53738.1;Name=ABJ53738.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0334%3B equivalent gene in S.pneumoniae R6 %3D spr0302%3B identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006;gbkey=CDS;gene=mraW;locus_tag=SPD_0304;product=S-adenosyl-methyltransferase MraW;protein_id=ABJ53738.1;transl_table=11
CP000410.2	Genbank	gene	301990	302307	.	+	.	ID=gene-SPD_0305;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=SPD_0305
CP000410.2	Genbank	CDS	301990	302307	.	+	0	ID=cds-ABJ54514.1;Parent=gene-SPD_0305;Dbxref=NCBI_GP:ABJ54514.1;Name=ABJ54514.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0335%3B equivalent gene in S.pneumoniae R6 %3D spr0303%3B identified by match to protein family HMM TIGR02209;gbkey=CDS;gene=ftsL;locus_tag=SPD_0305;product=cell division protein FtsL;protein_id=ABJ54514.1;transl_table=11
CP000410.2	Genbank	gene	302311	304563	.	+	.	ID=gene-SPD_0306;Name=pbpX;gbkey=Gene;gene=pbpX;gene_biotype=protein_coding;locus_tag=SPD_0306
CP000410.2	Genbank	CDS	302311	304563	.	+	0	ID=cds-ABJ55333.2;Parent=gene-SPD_0306;Dbxref=NCBI_GP:ABJ55333.2;Name=ABJ55333.2;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0336%3B equivalent gene in S.pneumoniae R6 %3D spr0304%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793;gbkey=CDS;gene=pbpX;locus_tag=SPD_0306;product=penicillin-binding protein 2X;protein_id=ABJ55333.2;transl_table=11
CP000410.2	Genbank	gene	304565	305545	.	+	.	ID=gene-SPD_0307;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SPD_0307
CP000410.2	Genbank	CDS	304565	305545	.	+	0	ID=cds-ABJ54244.1;Parent=gene-SPD_0307;Dbxref=NCBI_GP:ABJ54244.1;Name=ABJ54244.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0337%3B equivalent gene in S.pneumoniae R6 %3D spr0305%3B identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445;gbkey=CDS;gene=mraY;locus_tag=SPD_0307;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=ABJ54244.1;transl_table=11
CP000410.2	Genbank	gene	306102	308207	.	+	.	ID=gene-SPD_0308;Name=clpL;gbkey=Gene;gene=clpL;gene_biotype=protein_coding;locus_tag=SPD_0308
CP000410.2	Genbank	CDS	306102	308207	.	+	0	ID=cds-ABJ54264.1;Parent=gene-SPD_0308;Dbxref=NCBI_GP:ABJ54264.1;Name=ABJ54264.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0338%3B equivalent gene in S.pneumoniae R6 %3D spr0307%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;gene=clpL;locus_tag=SPD_0308;product=ATP-dependent Clp protease%2C ATP-binding subunit;protein_id=ABJ54264.1;transl_table=11
CP000410.2	Genbank	gene	308503	308985	.	-	.	ID=gene-SPD_0309;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=SPD_0309
CP000410.2	Genbank	CDS	308503	308985	.	-	0	ID=cds-ABJ54495.1;Parent=gene-SPD_0309;Dbxref=NCBI_GP:ABJ54495.1;Name=ABJ54495.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0340%3B equivalent gene in S.pneumoniae R6 %3D spr0308%3B identified by match to protein family HMM PF02664;gbkey=CDS;gene=luxS;locus_tag=SPD_0309;product=S-ribosylhomocysteine lyase (autoinducer-2 production protein luxS) (AI-2 synthesis protein);protein_id=ABJ54495.1;transl_table=11
CP000410.2	Genbank	gene	309080	310564	.	-	.	ID=gene-SPD_0310;Name=SPD_0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0310
CP000410.2	Genbank	CDS	309080	310564	.	-	0	ID=cds-ABJ54480.1;Parent=gene-SPD_0310;Dbxref=NCBI_GP:ABJ54480.1;Name=ABJ54480.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0341%3B equivalent gene in S.pneumoniae R6 %3D spr0309;gbkey=CDS;locus_tag=SPD_0310;product=hypothetical protein;protein_id=ABJ54480.1;transl_table=11
CP000410.2	Genbank	gene	310717	312324	.	+	.	ID=gene-SPD_0311;Name=dexB;gbkey=Gene;gene=dexB;gene_biotype=protein_coding;locus_tag=SPD_0311
CP000410.2	Genbank	CDS	310717	312324	.	+	0	ID=cds-ABJ55307.1;Parent=gene-SPD_0311;Dbxref=NCBI_GP:ABJ55307.1;Name=ABJ55307.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0342%3B equivalent gene in S.pneumoniae R6 %3D spr0310%3B identified by match to protein family HMM PF00128;gbkey=CDS;gene=dexB;locus_tag=SPD_0311;product=glucan 1%2C6-alpha-glucosidase;protein_id=ABJ55307.1;transl_table=11
CP000410.2	Genbank	gene	312483	312656	.	+	.	ID=gene-SPD_0313;Name=SPD_0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0313
CP000410.2	Genbank	CDS	312483	312656	.	+	0	ID=cds-ABJ55024.1;Parent=gene-SPD_0313;Dbxref=NCBI_GP:ABJ55024.1;Name=ABJ55024.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0311;gbkey=CDS;locus_tag=SPD_0313;product=hypothetical protein;protein_id=ABJ55024.1;transl_table=11
CP000410.2	Genbank	pseudogene	312649	312986	.	-	.	ID=gene-SPD_0312;Name=SPD_0312;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0016%3B equivalent gene in S.pneumoniae R6 %3D spr0312%3B IS630-Spn1%2C transposase Orf2%2C FRAMESHIFT;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0312;pseudo=true
CP000410.2	Genbank	pseudogene	313165	313494	.	-	.	ID=gene-SPD_0314;Name=SPD_0314;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0299%3B equivalent gene in S.pneumoniae R6 %3D spr0313. In TIGR4 this gene is annotated as a truncation%3B however in R6 there are numerous near perfect copies as well as copies with a slightly longer version with a different end that is not present in either R6 or TIGR4 This indicates it may still function as a transposase%3B IS630-Spn1%2C transposase Orf1%3B identified by match to protein family HMM PF01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0314;pseudo=true
CP000410.2	Genbank	gene	313745	315190	.	+	.	ID=gene-SPD_0315;Name=cps2A;gbkey=Gene;gene=cps2A;gene_biotype=protein_coding;locus_tag=SPD_0315
CP000410.2	Genbank	CDS	313745	315190	.	+	0	ID=cds-ABJ55259.1;Parent=gene-SPD_0315;Dbxref=NCBI_GP:ABJ55259.1;Name=ABJ55259.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0346%3B equivalent gene in S.pneumoniae R6 %3D spr0314%3B identified by match to protein family HMM PF02916%3B match to protein family HMM PF03816%3B match to protein family HMM TIGR00350;gbkey=CDS;gene=cps2A;locus_tag=SPD_0315;product=integral membrane regulatory protein Cps2A;protein_id=ABJ55259.1;transl_table=11
CP000410.2	Genbank	gene	315192	315923	.	+	.	ID=gene-SPD_0316;Name=cps2B;gbkey=Gene;gene=cps2B;gene_biotype=protein_coding;locus_tag=SPD_0316
CP000410.2	Genbank	CDS	315192	315923	.	+	0	ID=cds-ABJ54455.1;Parent=gene-SPD_0316;Dbxref=NCBI_GP:ABJ54455.1;Name=ABJ54455.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0347%3B identified by match to protein family HMM PF02811;gbkey=CDS;gene=cps2B;locus_tag=SPD_0316;product=tyrosine-protein phosphatase CpsB;protein_id=ABJ54455.1;transl_table=11
CP000410.2	Genbank	gene	315932	316624	.	+	.	ID=gene-SPD_0317;Name=cps2C;gbkey=Gene;gene=cps2C;gene_biotype=protein_coding;locus_tag=SPD_0317
CP000410.2	Genbank	CDS	315932	316624	.	+	0	ID=cds-ABJ55335.1;Parent=gene-SPD_0317;Dbxref=NCBI_GP:ABJ55335.1;Name=ABJ55335.1;Note=identified by match to protein family HMM PF02706%3B match to protein family HMM TIGR01006;gbkey=CDS;gene=cps2C;locus_tag=SPD_0317;product=chain length determinant protein/polysaccharide export protein%2C MPA1 family protein;protein_id=ABJ55335.1;transl_table=11
CP000410.2	Genbank	gene	316634	317314	.	+	.	ID=gene-SPD_0318;Name=cps2D;gbkey=Gene;gene=cps2D;gene_biotype=protein_coding;locus_tag=SPD_0318
CP000410.2	Genbank	CDS	316634	317314	.	+	0	ID=cds-ABJ55319.1;Parent=gene-SPD_0318;Dbxref=NCBI_GP:ABJ55319.1;Name=ABJ55319.1;Note=identified by match to protein family HMM TIGR01007;gbkey=CDS;gene=cps2D;locus_tag=SPD_0318;product=tyrosine-protein kinase Cps2D cytosolic ATPase domain;protein_id=ABJ55319.1;transl_table=11
CP000410.2	Genbank	gene	317329	318696	.	+	.	ID=gene-SPD_0319;Name=cps2E;gbkey=Gene;gene=cps2E;gene_biotype=protein_coding;locus_tag=SPD_0319
CP000410.2	Genbank	CDS	317329	318696	.	+	0	ID=cds-ABJ55069.1;Parent=gene-SPD_0319;Dbxref=NCBI_GP:ABJ55069.1;Name=ABJ55069.1;Note=Cps2E catalyzes the reversible addition of Glc-1-phosphate from UDP-Glc to a polyprenyl phosphate acceptor%3B identified by match to protein family HMM PF02397;gbkey=CDS;gene=cps2E;locus_tag=SPD_0319;product=undecaprenylphosphate glucosephosphotransferase Cps2E;protein_id=ABJ55069.1;transl_table=11
CP000410.2	Genbank	gene	318728	319912	.	+	.	ID=gene-SPD_0320;Name=cps2T;gbkey=Gene;gene=cps2T;gene_biotype=protein_coding;locus_tag=SPD_0320
CP000410.2	Genbank	CDS	318728	319912	.	+	0	ID=cds-ABJ54749.1;Parent=gene-SPD_0320;Dbxref=NCBI_GP:ABJ54749.1;Name=ABJ54749.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;gene=cps2T;locus_tag=SPD_0320;product=glycosyl transferase%2C group 1 family protein%2C putative;protein_id=ABJ54749.1;transl_table=11
CP000410.2	Genbank	gene	319905	320849	.	+	.	ID=gene-SPD_0321;Name=cps2F;gbkey=Gene;gene=cps2F;gene_biotype=protein_coding;locus_tag=SPD_0321
CP000410.2	Genbank	CDS	319905	320849	.	+	0	ID=cds-ABJ54547.1;Parent=gene-SPD_0321;Dbxref=NCBI_GP:ABJ54547.1;Name=ABJ54547.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;gene=cps2F;locus_tag=SPD_0321;product=glycosyl transferase%2C group 2 family protein;protein_id=ABJ54547.1;transl_table=11
CP000410.2	Genbank	gene	320865	321911	.	+	.	ID=gene-SPD_0322;Name=cps2G;gbkey=Gene;gene=cps2G;gene_biotype=protein_coding;locus_tag=SPD_0322
CP000410.2	Genbank	CDS	320865	321911	.	+	0	ID=cds-ABJ54989.1;Parent=gene-SPD_0322;Dbxref=NCBI_GP:ABJ54989.1;Name=ABJ54989.1;Note=identified by match to protein family HMM PF00534;gbkey=CDS;gene=cps2G;locus_tag=SPD_0322;product=glycosyl transferase%2C group 1 family protein;protein_id=ABJ54989.1;transl_table=11
CP000410.2	Genbank	gene	321952	323115	.	+	.	ID=gene-SPD_0323;Name=csp2H;gbkey=Gene;gene=csp2H;gene_biotype=protein_coding;locus_tag=SPD_0323
CP000410.2	Genbank	CDS	321952	323115	.	+	0	ID=cds-ABJ53951.1;Parent=gene-SPD_0323;Dbxref=NCBI_GP:ABJ53951.1;Name=ABJ53951.1;Note=Part of the type 2 capsule locus. equivalent gene in S.pneumoniae R6 %3D spr0315;gbkey=CDS;gene=csp2H;locus_tag=SPD_0323;product=Polysaccharide polymerase;protein_id=ABJ53951.1;transl_table=11
CP000410.2	Genbank	gene	323245	324402	.	+	.	ID=gene-SPD_0324;Name=cps2I;gbkey=Gene;gene=cps2I;gene_biotype=protein_coding;locus_tag=SPD_0324
CP000410.2	Genbank	CDS	323245	324402	.	+	0	ID=cds-ABJ55039.1;Parent=gene-SPD_0324;Dbxref=NCBI_GP:ABJ55039.1;Name=ABJ55039.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0316%3B identified by match to protein family HMM PF00534;gbkey=CDS;gene=cps2I;locus_tag=SPD_0324;product=glycosyl transferase%2C group 1 family protein%2C putative;protein_id=ABJ55039.1;transl_table=11
CP000410.2	Genbank	gene	324399	325808	.	+	.	ID=gene-SPD_0325;Name=SPD_0325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0325
CP000410.2	Genbank	CDS	324399	325808	.	+	0	ID=cds-ABJ55131.1;Parent=gene-SPD_0325;Dbxref=NCBI_GP:ABJ55131.1;Name=ABJ55131.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0317%3B identified by match to protein family HMM PF01943;gbkey=CDS;locus_tag=SPD_0325;product=membrane protein%2C putative;protein_id=ABJ55131.1;transl_table=11
CP000410.2	Genbank	gene	325844	327082	.	+	.	ID=gene-SPD_0326;Name=cps2K;gbkey=Gene;gene=cps2K;gene_biotype=protein_coding;locus_tag=SPD_0326
CP000410.2	Genbank	CDS	325844	327082	.	+	0	ID=cds-ABJ54329.1;Parent=gene-SPD_0326;Dbxref=NCBI_GP:ABJ54329.1;Name=ABJ54329.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0318%3B identified by match to protein family HMM PF00984%3B match to protein family HMM PF01210%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721;gbkey=CDS;gene=cps2K;locus_tag=SPD_0326;product=UDP-glucose 6-dehydrogenase%2C putative;protein_id=ABJ54329.1;transl_table=11
CP000410.2	Genbank	gene	327111	327716	.	+	.	ID=gene-SPD_0327;Name=cps2P;gbkey=Gene;gene=cps2P;gene_biotype=protein_coding;locus_tag=SPD_0327
CP000410.2	Genbank	CDS	327111	327716	.	+	0	ID=cds-ABJ55443.1;Parent=gene-SPD_0327;Dbxref=NCBI_GP:ABJ55443.1;Name=ABJ55443.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0319%3B identified by match to protein family HMM PF03275;gbkey=CDS;gene=cps2P;locus_tag=SPD_0327;product=UDP-galactopyranose mutase;protein_id=ABJ55443.1;transl_table=11
CP000410.2	Genbank	gene	327794	328663	.	+	.	ID=gene-SPD_0328;Name=cps2L;gbkey=Gene;gene=cps2L;gene_biotype=protein_coding;locus_tag=SPD_0328
CP000410.2	Genbank	CDS	327794	328663	.	+	0	ID=cds-ABJ54347.1;Parent=gene-SPD_0328;Dbxref=NCBI_GP:ABJ54347.1;Name=ABJ54347.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0320%3B identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01207;gbkey=CDS;gene=cps2L;locus_tag=SPD_0328;product=glucose-1-phosphate thymidylyltransferase;protein_id=ABJ54347.1;transl_table=11
CP000410.2	Genbank	gene	328664	329257	.	+	.	ID=gene-SPD_0329;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=SPD_0329
CP000410.2	Genbank	CDS	328664	329257	.	+	0	ID=cds-ABJ55481.1;Parent=gene-SPD_0329;Dbxref=NCBI_GP:ABJ55481.1;Name=ABJ55481.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0321%3B identified by match to protein family HMM PF00908;gbkey=CDS;gene=rfbC;locus_tag=SPD_0329;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase%2C putative;protein_id=ABJ55481.1;transl_table=11
CP000410.2	Genbank	gene	329270	330319	.	+	.	ID=gene-SPD_0330;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=SPD_0330
CP000410.2	Genbank	CDS	329270	330319	.	+	0	ID=cds-ABJ55108.1;Parent=gene-SPD_0330;Dbxref=NCBI_GP:ABJ55108.1;Name=ABJ55108.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0322%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01181;gbkey=CDS;gene=rfbB;locus_tag=SPD_0330;product=dTDP-glucose 4%2C6-dehydratase;protein_id=ABJ55108.1;transl_table=11
CP000410.2	Genbank	gene	330385	331236	.	+	.	ID=gene-SPD_0331;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=SPD_0331
CP000410.2	Genbank	CDS	330385	331236	.	+	0	ID=cds-ABJ54208.1;Parent=gene-SPD_0331;Dbxref=NCBI_GP:ABJ54208.1;Name=ABJ54208.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0323%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01214;gbkey=CDS;gene=rfbD;locus_tag=SPD_0331;product=dTDP-4-dehydrorhamnose reductase;protein_id=ABJ54208.1;transl_table=11
CP000410.2	Genbank	pseudogene	331312	332210	.	+	.	ID=gene-SPD_0332;Name=SPD_0332;Note=equivalent gene in S.pneumoniae R6 %3D spr0324%3B IS66 family element%2C Orf3%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0332;pseudo=true
CP000410.2	Genbank	gene	332281	332439	.	+	.	ID=gene-SPD_0333;Name=SPD_0333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0333
CP000410.2	Genbank	CDS	332281	332439	.	+	0	ID=cds-ABJ55349.1;Parent=gene-SPD_0333;Dbxref=NCBI_GP:ABJ55349.1;Name=ABJ55349.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0808%3B equivalent gene in S.pneumoniae R6 %3D spr0326;gbkey=CDS;locus_tag=SPD_0333;product=hypothetical protein;protein_id=ABJ55349.1;transl_table=11
CP000410.2	Genbank	gene	332641	334623	.	+	.	ID=gene-SPD_0334;Name=aliA;gbkey=Gene;gene=aliA;gene_biotype=protein_coding;locus_tag=SPD_0334
CP000410.2	Genbank	CDS	332641	334623	.	+	0	ID=cds-ABJ54278.1;Parent=gene-SPD_0334;Dbxref=NCBI_GP:ABJ54278.1;Name=ABJ54278.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0366%3B equivalent gene in S.pneumoniae R6 %3D spr0327%3B identified by match to protein family HMM PF00496;gbkey=CDS;gene=aliA;locus_tag=SPD_0334;product=oligopeptide ABC transporter%2C oligopeptide-binding protein AliA;protein_id=ABJ54278.1;transl_table=11
CP000410.2	Genbank	gene	334923	340226	.	+	.	ID=gene-SPD_0335;Name=SPD_0335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0335
CP000410.2	Genbank	CDS	334923	340226	.	+	0	ID=cds-ABJ53757.1;Parent=gene-SPD_0335;Dbxref=NCBI_GP:ABJ53757.1;Name=ABJ53757.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0368%3B equivalent gene in S.pneumoniae R6 %3D spr0328%3B identified by match to protein family HMM PF00754%3B match to protein family HMM PF04650%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168;gbkey=CDS;locus_tag=SPD_0335;product=cell wall surface anchor family protein;protein_id=ABJ53757.1;transl_table=11
CP000410.2	Genbank	gene	340393	342552	.	-	.	ID=gene-SPD_0336;Name=pbp1A;gbkey=Gene;gene=pbp1A;gene_biotype=protein_coding;locus_tag=SPD_0336
CP000410.2	Genbank	CDS	340393	342552	.	-	0	ID=cds-ABJ54626.1;Parent=gene-SPD_0336;Dbxref=NCBI_GP:ABJ54626.1;Name=ABJ54626.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0369%3B equivalent gene in S.pneumoniae R6 %3D spr0329%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;gene=pbp1A;locus_tag=SPD_0336;product=penicillin-binding protein 1A;protein_id=ABJ54626.1;transl_table=11
CP000410.2	Genbank	gene	342549	343145	.	-	.	ID=gene-SPD_0337;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=SPD_0337
CP000410.2	Genbank	CDS	342549	343145	.	-	0	ID=cds-ABJ53846.1;Parent=gene-SPD_0337;Dbxref=NCBI_GP:ABJ53846.1;Name=ABJ53846.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0370%3B equivalent gene in S.pneumoniae R6 %3D spr0330%3B identified by match to protein family HMM PF03838%3B match to protein family HMM TIGR00648;gbkey=CDS;gene=recU;locus_tag=SPD_0337;product=recombination protein U;protein_id=ABJ53846.1;transl_table=11
CP000410.2	Genbank	gene	343211	343738	.	+	.	ID=gene-SPD_0338;Name=SPD_0338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0338
CP000410.2	Genbank	CDS	343211	343738	.	+	0	ID=cds-ABJ55194.1;Parent=gene-SPD_0338;Dbxref=NCBI_GP:ABJ55194.1;Name=ABJ55194.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0371%3B equivalent gene in S.pneumoniae R6 %3D spr0331%3B identified by match to protein family HMM PF06908;gbkey=CDS;locus_tag=SPD_0338;product=hypothetical protein;protein_id=ABJ55194.1;transl_table=11
CP000410.2	Genbank	gene	343808	344137	.	+	.	ID=gene-SPD_0339;Name=SPD_0339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0339
CP000410.2	Genbank	CDS	343808	344137	.	+	0	ID=cds-ABJ54095.1;Parent=gene-SPD_0339;Dbxref=NCBI_GP:ABJ54095.1;Name=ABJ54095.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0372%3B equivalent gene in S.pneumoniae R6 %3D spr0332%3B identified by match to protein family HMM PF05103;gbkey=CDS;locus_tag=SPD_0339;product=hypothetical protein;protein_id=ABJ54095.1;transl_table=11
CP000410.2	Genbank	gene	344150	344553	.	+	.	ID=gene-SPD_0340;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=SPD_0340
CP000410.2	Genbank	RNase_P_RNA	344150	344553	.	+	.	ID=rna-SPD_0340;Parent=gene-SPD_0340;gbkey=ncRNA;gene=rnpB;locus_tag=SPD_0340;product=Ribonuclease P - RNA component
CP000410.2	Genbank	exon	344150	344553	.	+	.	ID=exon-SPD_0340-1;Parent=rna-SPD_0340;gbkey=ncRNA;gene=rnpB;locus_tag=SPD_0340;product=Ribonuclease P - RNA component
CP000410.2	Genbank	gene	344623	345780	.	+	.	ID=gene-SPD_0341;Name=SPD_0341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0341
CP000410.2	Genbank	CDS	344623	345780	.	+	0	ID=cds-ABJ55512.1;Parent=gene-SPD_0341;Dbxref=NCBI_GP:ABJ55512.1;Name=ABJ55512.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0373%3B equivalent gene in S.pneumoniae R6 %3D spr0333%3B identified by match to protein family HMM PF01170;gbkey=CDS;locus_tag=SPD_0341;product=RNA methylase family protein UPF0020%2C putative;protein_id=ABJ55512.1;transl_table=11
CP000410.2	Genbank	gene	345793	347187	.	+	.	ID=gene-SPD_0342;Name=SPD_0342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0342
CP000410.2	Genbank	CDS	345793	347187	.	+	0	ID=cds-ABJ54619.1;Parent=gene-SPD_0342;Dbxref=NCBI_GP:ABJ54619.1;Name=ABJ54619.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0374%3B equivalent gene in S.pneumoniae R6 %3D spr0334;gbkey=CDS;locus_tag=SPD_0342;product=hypothetical protein;protein_id=ABJ54619.1;transl_table=11
CP000410.2	Genbank	gene	347263	348687	.	+	.	ID=gene-SPD_0343;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=SPD_0343
CP000410.2	Genbank	CDS	347263	348687	.	+	0	ID=cds-ABJ53749.1;Parent=gene-SPD_0343;Dbxref=NCBI_GP:ABJ53749.1;Name=ABJ53749.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0375%3B equivalent gene in S.pneumoniae R6 %3D spr0335%3B identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873;gbkey=CDS;gene=gnd;locus_tag=SPD_0343;product=6-phosphogluconate dehydrogenase%2C decarboxylating;protein_id=ABJ53749.1;transl_table=11
CP000410.2	Genbank	gene	348699	349388	.	+	.	ID=gene-SPD_0344;Name=SPD_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0344
CP000410.2	Genbank	CDS	348699	349388	.	+	0	ID=cds-ABJ54951.1;Parent=gene-SPD_0344;Dbxref=NCBI_GP:ABJ54951.1;Name=ABJ54951.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0376%3B equivalent gene in S.pneumoniae R6 %3D spr0336%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=SPD_0344;product=DNA-binding response regulator;protein_id=ABJ54951.1;transl_table=11
CP000410.2	Genbank	gene	349486	350502	.	+	.	ID=gene-SPD_0345;Name=cbpC;gbkey=Gene;gene=cbpC;gene_biotype=protein_coding;locus_tag=SPD_0345
CP000410.2	Genbank	CDS	349486	350502	.	+	0	ID=cds-ABJ53794.1;Parent=gene-SPD_0345;Dbxref=NCBI_GP:ABJ53794.1;Name=ABJ53794.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0337%3B identified by similarity to GB:AAK745441%3B match to protein family HMM PF01473;gbkey=CDS;gene=cbpC;locus_tag=SPD_0345;product=choline binding protein C;protein_id=ABJ53794.1;transl_table=11
CP000410.2	Genbank	gene	350624	351502	.	+	.	ID=gene-SPD_0346;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=SPD_0346
CP000410.2	Genbank	CDS	350624	351502	.	+	0	ID=cds-ABJ55195.1;Parent=gene-SPD_0346;Dbxref=NCBI_GP:ABJ55195.1;Name=ABJ55195.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0381%3B equivalent gene in S.pneumoniae R6 %3D spr0338%3B identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR00549;gbkey=CDS;gene=mvk;locus_tag=SPD_0346;product=mevalonate kinase;protein_id=ABJ55195.1;transl_table=11
CP000410.2	Genbank	gene	351484	352437	.	+	.	ID=gene-SPD_0347;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=protein_coding;locus_tag=SPD_0347
CP000410.2	Genbank	CDS	351484	352437	.	+	0	ID=cds-ABJ54071.1;Parent=gene-SPD_0347;Dbxref=NCBI_GP:ABJ54071.1;Name=ABJ54071.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0382%3B equivalent gene in S.pneumoniae R6 %3D spr0339%3B identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR01240;gbkey=CDS;gene=mvaD;locus_tag=SPD_0347;product=diphosphomevalonate decarboxylase;protein_id=ABJ54071.1;transl_table=11
CP000410.2	Genbank	gene	352424	353431	.	+	.	ID=gene-SPD_0348;Name=mvaK2;gbkey=Gene;gene=mvaK2;gene_biotype=protein_coding;locus_tag=SPD_0348
CP000410.2	Genbank	CDS	352424	353431	.	+	0	ID=cds-ABJ55414.1;Parent=gene-SPD_0348;Dbxref=NCBI_GP:ABJ55414.1;Name=ABJ55414.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0383%3B equivalent gene in S.pneumoniae R6 %3D spr0340%3B identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR01220;gbkey=CDS;gene=mvaK2;locus_tag=SPD_0348;product=phosphomevalonate kinase;protein_id=ABJ55414.1;transl_table=11
CP000410.2	Genbank	gene	353415	354425	.	+	.	ID=gene-SPD_0349;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=SPD_0349
CP000410.2	Genbank	CDS	353415	354425	.	+	0	ID=cds-ABJ54064.1;Parent=gene-SPD_0349;Dbxref=NCBI_GP:ABJ54064.1;Name=ABJ54064.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0384%3B equivalent gene in S.pneumoniae R6 %3D spr0341%3B identified by match to protein family HMM PF01070%3B match to protein family HMM TIGR02151;gbkey=CDS;gene=fni;locus_tag=SPD_0349;product=isopentenyl-diphosphate delta-isomerase%2C type 2;protein_id=ABJ54064.1;transl_table=11
CP000410.2	Genbank	gene	354503	355201	.	+	.	ID=gene-SPD_0350;Name=SPD_0350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0350
CP000410.2	Genbank	CDS	354503	355201	.	+	0	ID=cds-ABJ55277.1;Parent=gene-SPD_0350;Dbxref=NCBI_GP:ABJ55277.1;Name=ABJ55277.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0385%3B equivalent gene in S.pneumoniae R6 %3D spr0342;gbkey=CDS;locus_tag=SPD_0350;product=hypothetical protein;protein_id=ABJ55277.1;transl_table=11
CP000410.2	Genbank	gene	355198	356193	.	+	.	ID=gene-SPD_0351;Name=SPD_0351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0351
CP000410.2	Genbank	CDS	355198	356193	.	+	0	ID=cds-ABJ54123.1;Parent=gene-SPD_0351;Dbxref=NCBI_GP:ABJ54123.1;Name=ABJ54123.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0386%3B equivalent gene in S.pneumoniae R6 %3D spr0343%3B identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730;gbkey=CDS;locus_tag=SPD_0351;product=sensor histidine kinase%2C putative;protein_id=ABJ54123.1;transl_table=11
CP000410.2	Genbank	gene	356207	356839	.	+	.	ID=gene-SPD_0352;Name=SPD_0352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0352
CP000410.2	Genbank	CDS	356207	356839	.	+	0	ID=cds-ABJ55436.1;Parent=gene-SPD_0352;Dbxref=NCBI_GP:ABJ55436.1;Name=ABJ55436.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0387%3B equivalent gene in S.pneumoniae R6 %3D spr0344%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;locus_tag=SPD_0352;product=DNA-binding response regulator;protein_id=ABJ55436.1;transl_table=11
CP000410.2	Genbank	gene	356840	356986	.	+	.	ID=gene-SPD_0353;Name=SPD_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0353
CP000410.2	Genbank	CDS	356840	356986	.	+	0	ID=cds-ABJ54382.1;Parent=gene-SPD_0353;Dbxref=NCBI_GP:ABJ54382.1;Name=ABJ54382.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0345;gbkey=CDS;locus_tag=SPD_0353;product=hypothetical protein;protein_id=ABJ54382.1;transl_table=11
CP000410.2	Genbank	pseudogene	357079	357609	.	+	.	ID=gene-SPD_0354;Name=SPD_0354;Note=equivalent gene in S.pneumoniae R6 %3D spr0347. The R6 and D39 versions are also frameshifted relative to orthologs%3B DNA alkylation repair enzyme%2C putative%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0354;pseudo=true
CP000410.2	Genbank	gene	357759	357953	.	+	.	ID=gene-SPD_0355;Name=SPD_0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0355
CP000410.2	Genbank	CDS	357759	357953	.	+	0	ID=cds-ABJ54800.1;Parent=gene-SPD_0355;Dbxref=NCBI_GP:ABJ54800.1;Name=ABJ54800.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0389%3B equivalent gene in S.pneumoniae R6 %3D spr0348;gbkey=CDS;locus_tag=SPD_0355;product=hypothetical protein;protein_id=ABJ54800.1;transl_table=11
CP000410.2	Genbank	pseudogene	358439	358904	.	+	.	ID=gene-SPD_0356;Name=cbpG;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0390%3B equivalent gene in S.pneumoniae R6 %3D spr0349. The R6 gene has the same frameshift%3B choline binding protein G%2C authentic frameshift;gbkey=Gene;gene=cbpG;gene_biotype=pseudogene;locus_tag=SPD_0356;pseudo=true
CP000410.2	Genbank	gene	358923	359807	.	+	.	ID=gene-SPD_0357;Name=cbpF;gbkey=Gene;gene=cbpF;gene_biotype=protein_coding;locus_tag=SPD_0357
CP000410.2	Genbank	CDS	358923	359807	.	+	0	ID=cds-ABJ54163.1;Parent=gene-SPD_0357;Dbxref=NCBI_GP:ABJ54163.1;Name=ABJ54163.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0351%3B identified by match to protein family HMM PF01473;gbkey=CDS;gene=cbpF;locus_tag=SPD_0357;product=choline binding protein F;protein_id=ABJ54163.1;transl_table=11
CP000410.2	Genbank	pseudogene	359935	360298	.	-	.	ID=gene-SPD_0358;Name=SPD_0358;Note=equivalent gene in S.pneumoniae R6 %3D spr0353%3B transposase%2C putative%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0358;pseudo=true
CP000410.2	Genbank	gene	360869	361081	.	-	.	ID=gene-SPD_0359;Name=SPD_0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0359
CP000410.2	Genbank	CDS	360869	361081	.	-	0	ID=cds-ABJ54389.1;Parent=gene-SPD_0359;Dbxref=NCBI_GP:ABJ54389.1;Name=ABJ54389.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1596%3B equivalent gene in S.pneumoniae R6 %3D spr0355;gbkey=CDS;locus_tag=SPD_0359;product=hypothetical protein;protein_id=ABJ54389.1;transl_table=11
CP000410.2	Genbank	gene	361290	363059	.	+	.	ID=gene-SPD_0360;Name=mtlA;gbkey=Gene;gene=mtlA;gene_biotype=protein_coding;locus_tag=SPD_0360
CP000410.2	Genbank	CDS	361290	363059	.	+	0	ID=cds-ABJ54037.1;Parent=gene-SPD_0360;Dbxref=NCBI_GP:ABJ54037.1;Name=ABJ54037.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0394%3B equivalent gene in S.pneumoniae R6 %3D spr0356%3B identified by match to protein family HMM PF02302%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00851;gbkey=CDS;gene=mtlA;locus_tag=SPD_0360;product=PTS system%2C mannitol-specific IIBC components;protein_id=ABJ54037.1;transl_table=11
CP000410.2	Genbank	gene	363083	365038	.	+	.	ID=gene-SPD_0361;Name=SPD_0361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0361
CP000410.2	Genbank	CDS	363083	365038	.	+	0	ID=cds-ABJ55120.1;Parent=gene-SPD_0361;Dbxref=NCBI_GP:ABJ55120.1;Name=ABJ55120.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0395%3B equivalent gene in S.pneumoniae R6 %3D spr0357;gbkey=CDS;locus_tag=SPD_0361;product=transcriptional regulator%2C putative;protein_id=ABJ55120.1;transl_table=11
CP000410.2	Genbank	gene	365040	365477	.	+	.	ID=gene-SPD_0362;Name=mtlA2;gbkey=Gene;gene=mtlA2;gene_biotype=protein_coding;locus_tag=SPD_0362
CP000410.2	Genbank	CDS	365040	365477	.	+	0	ID=cds-ABJ53824.1;Parent=gene-SPD_0362;Dbxref=NCBI_GP:ABJ53824.1;Name=ABJ53824.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0396%3B equivalent gene in S.pneumoniae R6 %3D spr0358%3B identified by match to protein family HMM PF00359;gbkey=CDS;gene=mtlA2;locus_tag=SPD_0362;product=PTS system%2C mannitol-specific enzyme IIA;protein_id=ABJ53824.1;transl_table=11
CP000410.2	Genbank	gene	365539	366675	.	+	.	ID=gene-SPD_0363;Name=SPD_0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0363
CP000410.2	Genbank	CDS	365539	366675	.	+	0	ID=cds-ABJ54824.1;Parent=gene-SPD_0363;Dbxref=NCBI_GP:ABJ54824.1;Name=ABJ54824.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0397%3B equivalent gene in S.pneumoniae R6 %3D spr0359%3B identified by match to protein family HMM PF01232%3B match to protein family HMM PF08125;gbkey=CDS;locus_tag=SPD_0363;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=ABJ54824.1;transl_table=11
CP000410.2	Genbank	gene	367057	367170	.	+	.	ID=gene-SPD_0364;Name=SPD_0364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0364
CP000410.2	Genbank	CDS	367057	367170	.	+	0	ID=cds-ABJ54527.1;Parent=gene-SPD_0364;Dbxref=NCBI_GP:ABJ54527.1;Name=ABJ54527.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0399%3B equivalent gene in S.pneumoniae R6 %3D spr0361;gbkey=CDS;locus_tag=SPD_0364;product=ABC-type polar amino acid transport system%2C ATPase component;protein_id=ABJ54527.1;transl_table=11
CP000410.2	Genbank	gene	367474	368757	.	+	.	ID=gene-SPD_0365;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=SPD_0365
CP000410.2	Genbank	CDS	367474	368757	.	+	0	ID=cds-ABJ55051.1;Parent=gene-SPD_0365;Dbxref=NCBI_GP:ABJ55051.1;Name=ABJ55051.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0400%3B equivalent gene in S.pneumoniae R6 %3D spr0362%3B identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115;gbkey=CDS;gene=tig;locus_tag=SPD_0365;product=trigger factor;protein_id=ABJ55051.1;transl_table=11
CP000410.2	Genbank	gene	368805	371171	.	-	.	ID=gene-SPD_0366;Name=SPD_0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0366
CP000410.2	Genbank	CDS	368805	371171	.	-	0	ID=cds-ABJ54114.1;Parent=gene-SPD_0366;Dbxref=NCBI_GP:ABJ54114.1;Name=ABJ54114.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0401%3B equivalent gene in S.pneumoniae R6 %3D spr0363%3B identified by match to protein family HMM TIGR01448;gbkey=CDS;locus_tag=SPD_0366;product=helicase%2C RecD/TraA family protein;protein_id=ABJ54114.1;transl_table=11
CP000410.2	Genbank	gene	371405	372019	.	-	.	ID=gene-SPD_0367;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=SPD_0367
CP000410.2	Genbank	CDS	371405	372019	.	-	0	ID=cds-ABJ53977.1;Parent=gene-SPD_0367;Dbxref=NCBI_GP:ABJ53977.1;Name=ABJ53977.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0402%3B equivalent gene in S.pneumoniae R6 %3D spr0364%3B identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB;locus_tag=SPD_0367;product=signal peptidase I;protein_id=ABJ53977.1;transl_table=11
CP000410.2	Genbank	gene	372031	372903	.	-	.	ID=gene-SPD_0368;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=SPD_0368
CP000410.2	Genbank	CDS	372031	372903	.	-	0	ID=cds-ABJ54417.1;Parent=gene-SPD_0368;Dbxref=NCBI_GP:ABJ54417.1;Name=ABJ54417.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0403%3B equivalent gene in S.pneumoniae R6 %3D spr0365%3B identified by match to protein family HMM PF01351%3B match to protein family HMM TIGR00716;gbkey=CDS;gene=rnhC;locus_tag=SPD_0368;product=ribonuclease HIII;protein_id=ABJ54417.1;transl_table=11
CP000410.2	Genbank	gene	372981	373292	.	+	.	ID=gene-SPD_0369;Name=SPD_0369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0369
CP000410.2	Genbank	CDS	372981	373292	.	+	0	ID=cds-ABJ55215.1;Parent=gene-SPD_0369;Dbxref=NCBI_GP:ABJ55215.1;Name=ABJ55215.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0404%3B equivalent gene in S.pneumoniae R6 %3D spr0366;gbkey=CDS;locus_tag=SPD_0369;product=hypothetical protein;protein_id=ABJ55215.1;transl_table=11
CP000410.2	Genbank	gene	373289	373837	.	+	.	ID=gene-SPD_0370;Name=SPD_0370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0370
CP000410.2	Genbank	CDS	373289	373837	.	+	0	ID=cds-ABJ53690.1;Parent=gene-SPD_0370;Dbxref=NCBI_GP:ABJ53690.1;Name=ABJ53690.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0405%3B equivalent gene in S.pneumoniae R6 %3D spr0367%3B identified by match to protein family HMM PF02674;gbkey=CDS;locus_tag=SPD_0370;product=CvpA family protein;protein_id=ABJ53690.1;transl_table=11
CP000410.2	Genbank	gene	373941	376277	.	+	.	ID=gene-SPD_0371;Name=SPD_0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0371
CP000410.2	Genbank	CDS	373941	376277	.	+	0	ID=cds-ABJ55516.1;Parent=gene-SPD_0371;Dbxref=NCBI_GP:ABJ55516.1;Name=ABJ55516.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0406%3B equivalent gene in S.pneumoniae R6 %3D spr0368%3B identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069;gbkey=CDS;locus_tag=SPD_0371;product=MutS2 family protein;protein_id=ABJ55516.1;transl_table=11
CP000410.2	Genbank	gene	376619	377941	.	+	.	ID=gene-SPD_0372;Name=SPD_0372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0372
CP000410.2	Genbank	CDS	376619	377941	.	+	0	ID=cds-ABJ53619.1;Parent=gene-SPD_0372;Dbxref=NCBI_GP:ABJ53619.1;Name=ABJ53619.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0408%3B equivalent gene in S.pneumoniae R6 %3D spr0369%3B identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;locus_tag=SPD_0372;product=sodium:alanine symporter family protein;protein_id=ABJ53619.1;transl_table=11
CP000410.2	Genbank	gene	378159	378707	.	+	.	ID=gene-SPD_0373;Name=SPD_0373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0373
CP000410.2	Genbank	CDS	378159	378707	.	+	0	ID=cds-ABJ54804.1;Parent=gene-SPD_0373;Dbxref=NCBI_GP:ABJ54804.1;Name=ABJ54804.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0409%3B equivalent gene in S.pneumoniae R6 %3D spr0370%3B identified by match to protein family HMM PF02627%3B match to protein family HMM TIGR00778;gbkey=CDS;locus_tag=SPD_0373;product=hypothetical protein;protein_id=ABJ54804.1;transl_table=11
CP000410.2	Genbank	gene	378817	379716	.	+	.	ID=gene-SPD_0374;Name=SPD_0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0374
CP000410.2	Genbank	CDS	378817	379716	.	+	0	ID=cds-ABJ54910.1;Parent=gene-SPD_0374;Dbxref=NCBI_GP:ABJ54910.1;Name=ABJ54910.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0410%3B equivalent gene in S.pneumoniae R6 %3D spr0371%3B identified by match to protein family HMM PF03595;gbkey=CDS;locus_tag=SPD_0374;product=exfoliative toxin%2C putative;protein_id=ABJ54910.1;transl_table=11
CP000410.2	Genbank	gene	379741	381015	.	-	.	ID=gene-SPD_0375;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=SPD_0375
CP000410.2	Genbank	CDS	379741	381015	.	-	0	ID=cds-ABJ54621.1;Parent=gene-SPD_0375;Dbxref=NCBI_GP:ABJ54621.1;Name=ABJ54621.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0411%3B equivalent gene in S.pneumoniae R6 %3D spr0372%3B identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414;gbkey=CDS;gene=serS;locus_tag=SPD_0375;product=seryl-tRNA synthetase;protein_id=ABJ54621.1;transl_table=11
CP000410.2	Genbank	gene	381228	381599	.	-	.	ID=gene-SPD_0376;Name=SPD_0376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0376
CP000410.2	Genbank	CDS	381228	381599	.	-	0	ID=cds-ABJ54683.1;Parent=gene-SPD_0376;Dbxref=NCBI_GP:ABJ54683.1;Name=ABJ54683.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0412%3B equivalent gene in S.pneumoniae R6 %3D spr0373%3B identified by match to protein family HMM PF06115;gbkey=CDS;locus_tag=SPD_0376;product=hypothetical protein;protein_id=ABJ54683.1;transl_table=11
CP000410.2	Genbank	gene	381602	382966	.	-	.	ID=gene-SPD_0377;Name=SPD_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0377
CP000410.2	Genbank	CDS	381602	382966	.	-	0	ID=cds-ABJ54090.1;Parent=gene-SPD_0377;Dbxref=NCBI_GP:ABJ54090.1;Name=ABJ54090.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0413%3B equivalent gene in S.pneumoniae R6 %3D spr0374%3B identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00657;gbkey=CDS;locus_tag=SPD_0377;product=aspartate kinase;protein_id=ABJ54090.1;transl_table=11
CP000410.2	Genbank	gene	383291	384076	.	+	.	ID=gene-SPD_0378;Name=SPD_0378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0378
CP000410.2	Genbank	CDS	383291	384076	.	+	0	ID=cds-ABJ54915.1;Parent=gene-SPD_0378;Dbxref=NCBI_GP:ABJ54915.1;Name=ABJ54915.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0415%3B equivalent gene in S.pneumoniae R6 %3D spr0375%3B identified by match to protein family HMM PF00378;gbkey=CDS;locus_tag=SPD_0378;product=enoyl-CoA hydratase/isomerase family protein;protein_id=ABJ54915.1;transl_table=11
CP000410.2	Genbank	gene	384170	384604	.	+	.	ID=gene-SPD_0379;Name=SPD_0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0379
CP000410.2	Genbank	CDS	384170	384604	.	+	0	ID=cds-ABJ54323.1;Parent=gene-SPD_0379;Dbxref=NCBI_GP:ABJ54323.1;Name=ABJ54323.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0416%3B equivalent gene in S.pneumoniae R6 %3D spr0376%3B identified by match to protein family HMM PF01047%3B match to protein family HMM PF03965;gbkey=CDS;locus_tag=SPD_0379;product=transcriptional regulator%2C MarR family protein;protein_id=ABJ54323.1;transl_table=11
CP000410.2	Genbank	gene	384604	385578	.	+	.	ID=gene-SPD_0380;Name=fabH;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=SPD_0380
CP000410.2	Genbank	CDS	384604	385578	.	+	0	ID=cds-ABJ54296.1;Parent=gene-SPD_0380;Dbxref=NCBI_GP:ABJ54296.1;Name=ABJ54296.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0417%3B equivalent gene in S.pneumoniae R6 %3D spr0377%3B identified by match to protein family HMM TIGR00747;gbkey=CDS;gene=fabH;locus_tag=SPD_0380;product=3-oxoacyl-(acyl-carrier-protein) synthase III;protein_id=ABJ54296.1;transl_table=11
CP000410.2	Genbank	gene	385638	385862	.	+	.	ID=gene-SPD_0381;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=SPD_0381
CP000410.2	Genbank	CDS	385638	385862	.	+	0	ID=cds-ABJ55142.1;Parent=gene-SPD_0381;Dbxref=NCBI_GP:ABJ55142.1;Name=ABJ55142.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0418%3B equivalent gene in S.pneumoniae R6 %3D spr0378%3B identified by match to protein family HMM PF00550;gbkey=CDS;gene=acpP;locus_tag=SPD_0381;product=acyl carrier protein;protein_id=ABJ55142.1;transl_table=11
CP000410.2	Genbank	gene	385981	386955	.	+	.	ID=gene-SPD_0382;Name=fabK;gbkey=Gene;gene=fabK;gene_biotype=protein_coding;locus_tag=SPD_0382
CP000410.2	Genbank	CDS	385981	386955	.	+	0	ID=cds-ABJ54809.1;Parent=gene-SPD_0382;Dbxref=NCBI_GP:ABJ54809.1;Name=ABJ54809.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0419%3B equivalent gene in S.pneumoniae R6 %3D spr0379%3B identified by match to protein family HMM PF03060;gbkey=CDS;gene=fabK;locus_tag=SPD_0382;product=trans-2-enoyl-ACP reductase II;protein_id=ABJ54809.1;transl_table=11
CP000410.2	Genbank	gene	386948	387868	.	+	.	ID=gene-SPD_0383;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=SPD_0383
CP000410.2	Genbank	CDS	386948	387868	.	+	0	ID=cds-ABJ55344.1;Parent=gene-SPD_0383;Dbxref=NCBI_GP:ABJ55344.1;Name=ABJ55344.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0420%3B equivalent gene in S.pneumoniae R6 %3D spr0380%3B identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128;gbkey=CDS;gene=fabD;locus_tag=SPD_0383;product=malonyl CoA-acyl carrier protein transacylase;protein_id=ABJ55344.1;transl_table=11
CP000410.2	Genbank	gene	387902	388633	.	+	.	ID=gene-SPD_0384;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SPD_0384
CP000410.2	Genbank	CDS	387902	388633	.	+	0	ID=cds-ABJ53678.1;Parent=gene-SPD_0384;Dbxref=NCBI_GP:ABJ53678.1;Name=ABJ53678.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0421%3B equivalent gene in S.pneumoniae R6 %3D spr0381%3B identified by match to protein family HMM PF00106%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01830;gbkey=CDS;gene=fabG;locus_tag=SPD_0384;product=3-oxoacyl-(acyl-carrier-protein) reductase;protein_id=ABJ53678.1;transl_table=11
CP000410.2	Genbank	gene	388655	389890	.	+	.	ID=gene-SPD_0385;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=SPD_0385
CP000410.2	Genbank	CDS	388655	389890	.	+	0	ID=cds-ABJ54355.1;Parent=gene-SPD_0385;Dbxref=NCBI_GP:ABJ54355.1;Name=ABJ54355.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0422%3B equivalent gene in S.pneumoniae R6 %3D spr0382%3B identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801;gbkey=CDS;gene=fabF;locus_tag=SPD_0385;product=3-oxoacyl-[acyl-carrier-protein] synthase II;protein_id=ABJ54355.1;transl_table=11
CP000410.2	Genbank	gene	389893	390378	.	+	.	ID=gene-SPD_0386;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=SPD_0386
CP000410.2	Genbank	CDS	389893	390378	.	+	0	ID=cds-ABJ54411.1;Parent=gene-SPD_0386;Dbxref=NCBI_GP:ABJ54411.1;Name=ABJ54411.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0423%3B equivalent gene in S.pneumoniae R6 %3D spr0383%3B identified by match to protein family HMM PF00364%3B match to protein family HMM TIGR00531;gbkey=CDS;gene=accB;locus_tag=SPD_0386;product=acetyl-CoA carboxylase%2C biotin carboxyl carrier protein;protein_id=ABJ54411.1;transl_table=11
CP000410.2	Genbank	gene	390375	390797	.	+	.	ID=gene-SPD_0387;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=SPD_0387
CP000410.2	Genbank	CDS	390375	390797	.	+	0	ID=cds-ABJ55098.1;Parent=gene-SPD_0387;Dbxref=NCBI_GP:ABJ55098.1;Name=ABJ55098.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0424%3B equivalent gene in S.pneumoniae R6 %3D spr0384%3B identified by match to protein family HMM PF07977%3B match to protein family HMM TIGR01750;gbkey=CDS;gene=fabZ;locus_tag=SPD_0387;product=beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;protein_id=ABJ55098.1;transl_table=11
CP000410.2	Genbank	gene	390809	392176	.	+	.	ID=gene-SPD_0388;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=SPD_0388
CP000410.2	Genbank	CDS	390809	392176	.	+	0	ID=cds-ABJ54224.1;Parent=gene-SPD_0388;Dbxref=NCBI_GP:ABJ54224.1;Name=ABJ54224.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0425%3B equivalent gene in S.pneumoniae R6 %3D spr0385%3B identified by match to protein family HMM PF00289%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM TIGR00514;gbkey=CDS;gene=accC;locus_tag=SPD_0388;product=acetyl-CoA carboxylase%2C biotin carboxylase;protein_id=ABJ54224.1;transl_table=11
CP000410.2	Genbank	gene	392213	393079	.	+	.	ID=gene-SPD_0389;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=SPD_0389
CP000410.2	Genbank	CDS	392213	393079	.	+	0	ID=cds-ABJ53858.1;Parent=gene-SPD_0389;Dbxref=NCBI_GP:ABJ53858.1;Name=ABJ53858.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0426%3B equivalent gene in S.pneumoniae R6 %3D spr0386%3B identified by match to protein family HMM TIGR00515;gbkey=CDS;gene=accD;locus_tag=SPD_0389;product=acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit;protein_id=ABJ53858.1;transl_table=11
CP000410.2	Genbank	gene	393076	393843	.	+	.	ID=gene-SPD_0390;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=SPD_0390
CP000410.2	Genbank	CDS	393076	393843	.	+	0	ID=cds-ABJ53936.1;Parent=gene-SPD_0390;Dbxref=NCBI_GP:ABJ53936.1;Name=ABJ53936.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0427%3B equivalent gene in S.pneumoniae R6 %3D spr0387%3B identified by match to protein family HMM PF03255%3B match to protein family HMM TIGR00513;gbkey=CDS;gene=accA;locus_tag=SPD_0390;product=acetyl-CoA carboxylase%2C carboxyl transferase%2C alpha subunit;protein_id=ABJ53936.1;transl_table=11
CP000410.2	Genbank	gene	394002	394187	.	+	.	ID=gene-SPD_0391;Name=SPD_0391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0391
CP000410.2	Genbank	CDS	394002	394187	.	+	0	ID=cds-ABJ54285.1;Parent=gene-SPD_0391;Dbxref=NCBI_GP:ABJ54285.1;Name=ABJ54285.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0429%3B equivalent gene in S.pneumoniae R6 %3D spr0388;gbkey=CDS;locus_tag=SPD_0391;product=hypothetical protein;protein_id=ABJ54285.1;transl_table=11
CP000410.2	Genbank	gene	394444	394656	.	+	.	ID=gene-SPD_0392;Name=SPD_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0392
CP000410.2	Genbank	CDS	394444	394656	.	+	0	ID=cds-ABJ55119.1;Parent=gene-SPD_0392;Dbxref=NCBI_GP:ABJ55119.1;Name=ABJ55119.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0430%3B equivalent gene in S.pneumoniae R6 %3D spr0389;gbkey=CDS;locus_tag=SPD_0392;product=hypothetical protein;protein_id=ABJ55119.1;transl_table=11
CP000410.2	Genbank	gene	394954	395376	.	-	.	ID=gene-SPD_0393;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SPD_0393
CP000410.2	Genbank	CDS	394954	395376	.	-	0	ID=cds-ABJ54523.1;Parent=gene-SPD_0393;Dbxref=NCBI_GP:ABJ54523.1;Name=ABJ54523.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0433%3B equivalent gene in S.pneumoniae R6 %3D spr0390%3B identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951;gbkey=CDS;gene=nusB;locus_tag=SPD_0393;product=transcription antitermination factor NusB;protein_id=ABJ54523.1;transl_table=11
CP000410.2	Genbank	gene	395369	395758	.	-	.	ID=gene-SPD_0394;Name=SPD_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0394
CP000410.2	Genbank	CDS	395369	395758	.	-	0	ID=cds-ABJ54531.1;Parent=gene-SPD_0394;Dbxref=NCBI_GP:ABJ54531.1;Name=ABJ54531.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0434%3B equivalent gene in S.pneumoniae R6 %3D spr0391%3B identified by match to protein family HMM PF03780;gbkey=CDS;locus_tag=SPD_0394;product=hypothetical protein;protein_id=ABJ54531.1;transl_table=11
CP000410.2	Genbank	gene	395780	396340	.	-	.	ID=gene-SPD_0395;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=SPD_0395
CP000410.2	Genbank	CDS	395780	396340	.	-	0	ID=cds-ABJ54475.1;Parent=gene-SPD_0395;Dbxref=NCBI_GP:ABJ54475.1;Name=ABJ54475.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0435%3B equivalent gene in S.pneumoniae R6 %3D spr0392%3B identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM TIGR00038;gbkey=CDS;gene=efp;locus_tag=SPD_0395;product=translation elongation factor P;protein_id=ABJ54475.1;transl_table=11
CP000410.2	Genbank	gene	396469	397911	.	-	.	ID=gene-SPD_0396;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=SPD_0396
CP000410.2	Genbank	CDS	396469	397911	.	-	0	ID=cds-ABJ53922.1;Parent=gene-SPD_0396;Dbxref=NCBI_GP:ABJ53922.1;Name=ABJ53922.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0436%3B equivalent gene in S.pneumoniae R6 %3D spr0393%3B identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133;gbkey=CDS;gene=gatB;locus_tag=SPD_0396;product=glu-trnagln amidotransferase subunit b;protein_id=ABJ53922.1;transl_table=11
CP000410.2	Genbank	gene	397911	399377	.	-	.	ID=gene-SPD_0397;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=SPD_0397
CP000410.2	Genbank	CDS	397911	399377	.	-	0	ID=cds-ABJ54745.1;Parent=gene-SPD_0397;Dbxref=NCBI_GP:ABJ54745.1;Name=ABJ54745.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0437%3B equivalent gene in S.pneumoniae R6 %3D spr0394%3B identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132;gbkey=CDS;gene=gatA;locus_tag=SPD_0397;product=glutamyl-tRNA(Gln) amidotransferase subunit A;protein_id=ABJ54745.1;transl_table=11
CP000410.2	Genbank	gene	399377	399679	.	-	.	ID=gene-SPD_0398;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=SPD_0398
CP000410.2	Genbank	CDS	399377	399679	.	-	0	ID=cds-ABJ54141.1;Parent=gene-SPD_0398;Dbxref=NCBI_GP:ABJ54141.1;Name=ABJ54141.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0438%3B equivalent gene in S.pneumoniae R6 %3D spr0395%3B identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135;gbkey=CDS;gene=gatC;locus_tag=SPD_0398;product=glutamyl-tRNA(Gln) amidotransferase%2C C subunit;protein_id=ABJ54141.1;transl_table=11
CP000410.2	Genbank	gene	399892	401436	.	+	.	ID=gene-SPD_0399;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SPD_0399
CP000410.2	Genbank	CDS	399892	401436	.	+	0	ID=cds-ABJ55240.1;Parent=gene-SPD_0399;Dbxref=NCBI_GP:ABJ55240.1;Name=ABJ55240.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0439%3B equivalent gene in S.pneumoniae R6 %3D spr0396%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00503;gbkey=CDS;gene=prfC;locus_tag=SPD_0399;product=peptide chain release factor 3;protein_id=ABJ55240.1;transl_table=11
CP000410.2	Genbank	gene	401705	402190	.	+	.	ID=gene-SPD_0400;Name=SPD_0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0400
CP000410.2	Genbank	CDS	401705	402190	.	+	0	ID=cds-ABJ53884.1;Parent=gene-SPD_0400;Dbxref=NCBI_GP:ABJ53884.1;Name=ABJ53884.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0397%3B identified by match to protein family HMM PF01501;gbkey=CDS;locus_tag=SPD_0400;product=Glycosyl transferase family protein 8%2C putative;protein_id=ABJ53884.1;transl_table=11
CP000410.2	Genbank	gene	402306	402494	.	+	.	ID=gene-SPD_0401;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SPD_0401
CP000410.2	Genbank	CDS	402306	402494	.	+	0	ID=cds-ABJ54143.1;Parent=gene-SPD_0401;Dbxref=NCBI_GP:ABJ54143.1;Name=ABJ54143.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0441%3B equivalent gene in S.pneumoniae R6 %3D spr0398%3B identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009;gbkey=CDS;gene=rpmB;locus_tag=SPD_0401;product=ribosomal protein L28;protein_id=ABJ54143.1;transl_table=11
CP000410.2	Genbank	gene	402651	403016	.	+	.	ID=gene-SPD_0402;Name=SPD_0402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0402
CP000410.2	Genbank	CDS	402651	403016	.	+	0	ID=cds-ABJ54394.1;Parent=gene-SPD_0402;Dbxref=NCBI_GP:ABJ54394.1;Name=ABJ54394.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0442%3B equivalent gene in S.pneumoniae R6 %3D spr0399%3B identified by match to protein family HMM PF03780;gbkey=CDS;locus_tag=SPD_0402;product=hypothetical protein;protein_id=ABJ54394.1;transl_table=11
CP000410.2	Genbank	gene	403019	404686	.	+	.	ID=gene-SPD_0403;Name=SPD_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0403
CP000410.2	Genbank	CDS	403019	404686	.	+	0	ID=cds-ABJ55288.1;Parent=gene-SPD_0403;Dbxref=NCBI_GP:ABJ55288.1;Name=ABJ55288.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0443%3B equivalent gene in S.pneumoniae R6 %3D spr0400%3B identified by match to protein family HMM PF02734;gbkey=CDS;locus_tag=SPD_0403;product=hypothetical protein;protein_id=ABJ55288.1;transl_table=11
CP000410.2	Genbank	gene	404887	406587	.	+	.	ID=gene-SPD_0404;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=SPD_0404
CP000410.2	Genbank	CDS	404887	406587	.	+	0	ID=cds-ABJ54653.1;Parent=gene-SPD_0404;Dbxref=NCBI_GP:ABJ54653.1;Name=ABJ54653.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0445%3B equivalent gene in S.pneumoniae R6 %3D spr0401%3B identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118;gbkey=CDS;gene=ilvB;locus_tag=SPD_0404;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=ABJ54653.1;transl_table=11
CP000410.2	Genbank	gene	406580	407056	.	+	.	ID=gene-SPD_0405;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=SPD_0405
CP000410.2	Genbank	CDS	406580	407056	.	+	0	ID=cds-ABJ53967.1;Parent=gene-SPD_0405;Dbxref=NCBI_GP:ABJ53967.1;Name=ABJ53967.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0446%3B equivalent gene in S.pneumoniae R6 %3D spr0402%3B identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119;gbkey=CDS;gene=ilvN;locus_tag=SPD_0405;product=acetolactate synthase%2C small subunit;protein_id=ABJ53967.1;transl_table=11
CP000410.2	Genbank	gene	407122	408144	.	+	.	ID=gene-SPD_0406;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=SPD_0406
CP000410.2	Genbank	CDS	407122	408144	.	+	0	ID=cds-ABJ55451.1;Parent=gene-SPD_0406;Dbxref=NCBI_GP:ABJ55451.1;Name=ABJ55451.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0447%3B equivalent gene in S.pneumoniae R6 %3D spr0403%3B identified by match to protein family HMM PF01450%3B match to protein family HMM PF02629%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465;gbkey=CDS;gene=ilvC;locus_tag=SPD_0406;product=ketol-acid reductoisomerase;protein_id=ABJ55451.1;transl_table=11
CP000410.2	Genbank	gene	408221	408487	.	+	.	ID=gene-SPD_0407;Name=SPD_0407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0407
CP000410.2	Genbank	CDS	408221	408487	.	+	0	ID=cds-ABJ54117.1;Parent=gene-SPD_0407;Dbxref=NCBI_GP:ABJ54117.1;Name=ABJ54117.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0448%3B equivalent gene in S.pneumoniae R6 %3D spr0404;gbkey=CDS;locus_tag=SPD_0407;product=hypothetical protein;protein_id=ABJ54117.1;transl_table=11
CP000410.2	Genbank	gene	408725	409081	.	+	.	ID=gene-SPD_0408;Name=SPD_0408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0408
CP000410.2	Genbank	CDS	408725	409081	.	+	0	ID=cds-ABJ53705.1;Parent=gene-SPD_0408;Dbxref=NCBI_GP:ABJ53705.1;Name=ABJ53705.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0449%3B equivalent gene in S.pneumoniae R6 %3D spr0405%3B identified by similarity to GB:AAK992091;gbkey=CDS;locus_tag=SPD_0408;product=hypothetical protein;protein_id=ABJ53705.1;transl_table=11
CP000410.2	Genbank	gene	409131	410381	.	+	.	ID=gene-SPD_0409;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=SPD_0409
CP000410.2	Genbank	CDS	409131	410381	.	+	0	ID=cds-ABJ54795.1;Parent=gene-SPD_0409;Dbxref=NCBI_GP:ABJ54795.1;Name=ABJ54795.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0450%3B equivalent gene in S.pneumoniae R6 %3D spr0406%3B identified by match to protein family HMM PF00291%3B match to protein family HMM PF00585%3B match to protein family HMM TIGR02079;gbkey=CDS;gene=ilvA;locus_tag=SPD_0409;product=threonine dehydratase;protein_id=ABJ54795.1;transl_table=11
CP000410.2	Genbank	gene	411116	411331	.	+	.	ID=gene-SPD_0410;Name=SPD_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0410
CP000410.2	Genbank	CDS	411116	411331	.	+	0	ID=cds-ABJ53889.1;Parent=gene-SPD_0410;Dbxref=NCBI_GP:ABJ53889.1;Name=ABJ53889.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0451%3B equivalent gene in S.pneumoniae R6 %3D spr0407;gbkey=CDS;locus_tag=SPD_0410;product=hypothetical protein;protein_id=ABJ53889.1;transl_table=11
CP000410.2	Genbank	gene	411440	412180	.	-	.	ID=gene-SPD_0411;Name=SPD_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0411
CP000410.2	Genbank	CDS	411440	412180	.	-	0	ID=cds-ABJ54969.1;Parent=gene-SPD_0411;Dbxref=NCBI_GP:ABJ54969.1;Name=ABJ54969.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0452%3B equivalent gene in S.pneumoniae R6 %3D spr0408%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0411;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ54969.1;transl_table=11
CP000410.2	Genbank	gene	412180	413745	.	-	.	ID=gene-SPD_0412;Name=SPD_0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0412
CP000410.2	Genbank	CDS	412180	413745	.	-	0	ID=cds-ABJ54509.1;Parent=gene-SPD_0412;Dbxref=NCBI_GP:ABJ54509.1;Name=ABJ54509.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0453%3B equivalent gene in S.pneumoniae R6 %3D spr0409%3B identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_0412;product=amino acid ABC transporter%2C amino acid-binding protein/permease protein;protein_id=ABJ54509.1;transl_table=11
CP000410.2	Genbank	gene	413883	415772	.	+	.	ID=gene-SPD_0414;Name=SPD_0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0414
CP000410.2	Genbank	CDS	413883	415772	.	+	0	ID=cds-ABJ54826.1;Parent=gene-SPD_0414;Dbxref=NCBI_GP:ABJ54826.1;Name=ABJ54826.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0454%3B equivalent gene in S.pneumoniae R6 %3D spr0410;gbkey=CDS;locus_tag=SPD_0414;product=membrane protein%2C putative;protein_id=ABJ54826.1;transl_table=11
CP000410.2	Genbank	gene	415769	415930	.	-	.	ID=gene-SPD_0413;Name=SPD_0413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0413
CP000410.2	Genbank	CDS	415769	415930	.	-	0	ID=cds-ABJ55351.1;Parent=gene-SPD_0413;Dbxref=NCBI_GP:ABJ55351.1;Name=ABJ55351.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0411;gbkey=CDS;locus_tag=SPD_0413;product=hypothetical protein;protein_id=ABJ55351.1;transl_table=11
CP000410.2	Genbank	pseudogene	416072	416620	.	-	.	ID=gene-SPD_0415;Name=SPD_0415;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0917%3B equivalent gene in S.pneumoniae R6 %3D spr0412%3B transposase IS116/IS110/IS902 family protein%2C degenerate%3B identified by match to protein family HMM PF02371;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0415;pseudo=true
CP000410.2	Genbank	pseudogene	416818	416940	.	-	.	ID=gene-SPD_0416;Name=SPD_0416;Note=transposase%2C IS116-IS110-IS902 family protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0416;pseudo=true
CP000410.2	Genbank	gene	417196	418041	.	+	.	ID=gene-SPD_0417;Name=bacA;gbkey=Gene;gene=bacA;gene_biotype=protein_coding;locus_tag=SPD_0417
CP000410.2	Genbank	CDS	417196	418041	.	+	0	ID=cds-ABJ53932.1;Parent=gene-SPD_0417;Dbxref=NCBI_GP:ABJ53932.1;Name=ABJ53932.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0457%3B equivalent gene in S.pneumoniae R6 %3D spr0413%3B identified by match to protein family HMM PF02673;gbkey=CDS;gene=bacA;locus_tag=SPD_0417;product=bacitracin resistance protein/undecaprenol kinase%2C putative;protein_id=ABJ53932.1;transl_table=11
CP000410.2	Genbank	gene	418034	418162	.	+	.	ID=gene-SPD_0418;Name=SPD_0418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0418
CP000410.2	Genbank	CDS	418034	418162	.	+	0	ID=cds-ABJ54759.1;Parent=gene-SPD_0418;Dbxref=NCBI_GP:ABJ54759.1;Name=ABJ54759.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0346;gbkey=CDS;locus_tag=SPD_0418;product=hypothetical protein;protein_id=ABJ54759.1;transl_table=11
CP000410.2	Genbank	gene	418188	419249	.	-	.	ID=gene-SPD_0419;Name=dinP;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=SPD_0419
CP000410.2	Genbank	CDS	418188	419249	.	-	0	ID=cds-ABJ54388.1;Parent=gene-SPD_0419;Dbxref=NCBI_GP:ABJ54388.1;Name=ABJ54388.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0458%3B equivalent gene in S.pneumoniae R6 %3D spr0414%3B identified by match to protein family HMM PF00817;gbkey=CDS;gene=dinP;locus_tag=SPD_0419;product=DNA-damage inducible protein P;protein_id=ABJ54388.1;transl_table=11
CP000410.2	Genbank	gene	419644	421968	.	+	.	ID=gene-SPD_0420;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=SPD_0420
CP000410.2	Genbank	CDS	419644	421968	.	+	0	ID=cds-ABJ55484.1;Parent=gene-SPD_0420;Dbxref=NCBI_GP:ABJ55484.1;Name=ABJ55484.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0459%3B equivalent gene in S.pneumoniae R6 %3D spr0415%3B identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;locus_tag=SPD_0420;product=formate acetyltransferase;protein_id=ABJ55484.1;transl_table=11
CP000410.2	Genbank	gene	422335	422682	.	-	.	ID=gene-SPD_0421;Name=SPD_0421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0421
CP000410.2	Genbank	CDS	422335	422682	.	-	0	ID=cds-ABJ54496.1;Parent=gene-SPD_0421;Dbxref=NCBI_GP:ABJ54496.1;Name=ABJ54496.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0416;gbkey=CDS;locus_tag=SPD_0421;product=hypothetical protein;protein_id=ABJ54496.1;transl_table=11
CP000410.2	Genbank	gene	422880	423164	.	-	.	ID=gene-SPD_0422;Name=SPD_0422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0422
CP000410.2	Genbank	CDS	422880	423164	.	-	0	ID=cds-ABJ53809.1;Parent=gene-SPD_0422;Dbxref=NCBI_GP:ABJ53809.1;Name=ABJ53809.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0471%3B equivalent gene in S.pneumoniae R6 %3D spr0417;gbkey=CDS;locus_tag=SPD_0422;product=hypothetical protein;protein_id=ABJ53809.1;transl_table=11
CP000410.2	Genbank	gene	424599	425822	.	-	.	ID=gene-SPD_0423;Name=SPD_0423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0423
CP000410.2	Genbank	CDS	424599	425822	.	-	0	ID=cds-ABJ55302.1;Parent=gene-SPD_0423;Dbxref=NCBI_GP:ABJ55302.1;Name=ABJ55302.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0473%3B equivalent gene in S.pneumoniae R6 %3D spr0420%3B identified by match to protein family HMM PF00480;gbkey=CDS;locus_tag=SPD_0423;product=ROK family protein;protein_id=ABJ55302.1;transl_table=11
CP000410.2	Genbank	gene	425990	427312	.	+	.	ID=gene-SPD_0424;Name=SPD_0424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0424
CP000410.2	Genbank	CDS	425990	427312	.	+	0	ID=cds-ABJ54258.1;Parent=gene-SPD_0424;Dbxref=NCBI_GP:ABJ54258.1;Name=ABJ54258.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0474%3B equivalent gene in S.pneumoniae R6 %3D spr0421%3B identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410;gbkey=CDS;locus_tag=SPD_0424;product=PTS system%2C cellobiose-specific IIC component;protein_id=ABJ54258.1;transl_table=11
CP000410.2	Genbank	gene	427314	429200	.	+	.	ID=gene-SPD_0425;Name=SPD_0425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0425
CP000410.2	Genbank	CDS	427314	429200	.	+	0	ID=cds-ABJ54107.1;Parent=gene-SPD_0425;Dbxref=NCBI_GP:ABJ54107.1;Name=ABJ54107.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0475%3B equivalent gene in S.pneumoniae R6 %3D spr0422;gbkey=CDS;locus_tag=SPD_0425;product=hypothetical protein;protein_id=ABJ54107.1;transl_table=11
CP000410.2	Genbank	gene	429368	429712	.	+	.	ID=gene-SPD_0426;Name=lacF-1;gbkey=Gene;gene=lacF-1;gene_biotype=protein_coding;locus_tag=SPD_0426
CP000410.2	Genbank	CDS	429368	429712	.	+	0	ID=cds-ABJ55198.1;Parent=gene-SPD_0426;Dbxref=NCBI_GP:ABJ55198.1;Name=ABJ55198.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0476%3B equivalent gene in S.pneumoniae R6 %3D spr0423%3B identified by match to protein family HMM PF02255;gbkey=CDS;gene=lacF-1;locus_tag=SPD_0426;product=PTS system%2C lactose-specific IIA component;protein_id=ABJ55198.1;transl_table=11
CP000410.2	Genbank	gene	429722	431134	.	+	.	ID=gene-SPD_0427;Name=lacG-1;gbkey=Gene;gene=lacG-1;gene_biotype=protein_coding;locus_tag=SPD_0427
CP000410.2	Genbank	CDS	429722	431134	.	+	0	ID=cds-ABJ54778.1;Parent=gene-SPD_0427;Dbxref=NCBI_GP:ABJ54778.1;Name=ABJ54778.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0477%3B equivalent gene in S.pneumoniae R6 %3D spr0424%3B identified by match to protein family HMM PF00232%3B match to protein family HMM TIGR01233;gbkey=CDS;gene=lacG-1;locus_tag=SPD_0427;product=6-phospho-beta-galactosidase;protein_id=ABJ54778.1;transl_table=11
CP000410.2	Genbank	gene	431203	432882	.	+	.	ID=gene-SPD_0428;Name=lacE-1;gbkey=Gene;gene=lacE-1;gene_biotype=protein_coding;locus_tag=SPD_0428
CP000410.2	Genbank	CDS	431203	432882	.	+	0	ID=cds-ABJ53919.1;Parent=gene-SPD_0428;Dbxref=NCBI_GP:ABJ53919.1;Name=ABJ53919.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0478%3B equivalent gene in S.pneumoniae R6 %3D spr0425%3B identified by match to protein family HMM PF02302%3B match to protein family HMM PF02378;gbkey=CDS;gene=lacE-1;locus_tag=SPD_0428;product=PTS system%2C lactose-specific IIBC components;protein_id=ABJ53919.1;transl_table=11
CP000410.2	Genbank	gene	433010	434449	.	-	.	ID=gene-SPD_0429;Name=SPD_0429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0429
CP000410.2	Genbank	CDS	433010	434449	.	-	0	ID=cds-ABJ55415.1;Parent=gene-SPD_0429;Dbxref=NCBI_GP:ABJ55415.1;Name=ABJ55415.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0479%3B equivalent gene in S.pneumoniae R6 %3D spr0426%3B identified by match to protein family HMM PF02386;gbkey=CDS;locus_tag=SPD_0429;product=potassium uptake protein%2C Trk family protein;protein_id=ABJ55415.1;transl_table=11
CP000410.2	Genbank	gene	434453	435802	.	-	.	ID=gene-SPD_0430;Name=SPD_0430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0430
CP000410.2	Genbank	CDS	434453	435802	.	-	0	ID=cds-ABJ53612.1;Parent=gene-SPD_0430;Dbxref=NCBI_GP:ABJ53612.1;Name=ABJ53612.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0480%3B equivalent gene in S.pneumoniae R6 %3D spr0427%3B identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;locus_tag=SPD_0430;product=potassium uptake protein%2C Trk family protein;protein_id=ABJ53612.1;transl_table=11
CP000410.2	Genbank	gene	435991	436839	.	+	.	ID=gene-SPD_0431;Name=SPD_0431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0431
CP000410.2	Genbank	CDS	435991	436839	.	+	0	ID=cds-ABJ55426.1;Parent=gene-SPD_0431;Dbxref=NCBI_GP:ABJ55426.1;Name=ABJ55426.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0481%3B equivalent gene in S.pneumoniae R6 %3D spr0428%3B identified by match to protein family HMM PF01887;gbkey=CDS;locus_tag=SPD_0431;product=hypothetical protein;protein_id=ABJ55426.1;transl_table=11
CP000410.2	Genbank	gene	436854	437402	.	+	.	ID=gene-SPD_0432;Name=SPD_0432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0432
CP000410.2	Genbank	CDS	436854	437402	.	+	0	ID=cds-ABJ54294.1;Parent=gene-SPD_0432;Dbxref=NCBI_GP:ABJ54294.1;Name=ABJ54294.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0482%3B equivalent gene in S.pneumoniae R6 %3D spr0429%3B identified by match to protein family HMM PF07155;gbkey=CDS;locus_tag=SPD_0432;product=membrane protein%2C putative;protein_id=ABJ54294.1;transl_table=11
CP000410.2	Genbank	gene	437409	437621	.	+	.	ID=gene-SPD_0433;Name=SPD_0433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0433
CP000410.2	Genbank	CDS	437409	437621	.	+	0	ID=cds-ABJ54982.1;Parent=gene-SPD_0433;Dbxref=NCBI_GP:ABJ54982.1;Name=ABJ54982.1;gbkey=CDS;locus_tag=SPD_0433;product=hypothetical protein;protein_id=ABJ54982.1;transl_table=11
CP000410.2	Genbank	gene	437723	439405	.	+	.	ID=gene-SPD_0434;Name=SPD_0434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0434
CP000410.2	Genbank	CDS	437723	439405	.	+	0	ID=cds-ABJ55107.1;Parent=gene-SPD_0434;Dbxref=NCBI_GP:ABJ55107.1;Name=ABJ55107.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0483%3B equivalent gene in S.pneumoniae R6 %3D spr0430%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0434;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ55107.1;transl_table=11
CP000410.2	Genbank	gene	439390	440220	.	+	.	ID=gene-SPD_0435;Name=SPD_0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0435
CP000410.2	Genbank	CDS	439390	440220	.	+	0	ID=cds-ABJ55052.1;Parent=gene-SPD_0435;Dbxref=NCBI_GP:ABJ55052.1;Name=ABJ55052.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0484%3B equivalent gene in S.pneumoniae R6 %3D spr0431%3B identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=SPD_0435;product=membrane protein%2C putative;protein_id=ABJ55052.1;transl_table=11
CP000410.2	Genbank	gene	440413	440916	.	+	.	ID=gene-SPD_0436;Name=SPD_0436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0436
CP000410.2	Genbank	CDS	440413	440916	.	+	0	ID=cds-ABJ53688.1;Parent=gene-SPD_0436;Dbxref=NCBI_GP:ABJ53688.1;Name=ABJ53688.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0486%3B equivalent gene in S.pneumoniae R6 %3D spr0432%3B identified by match to protein family HMM PF00588;gbkey=CDS;locus_tag=SPD_0436;product=TrmH family RNA methyltransferase;protein_id=ABJ53688.1;transl_table=11
CP000410.2	Genbank	gene	441375	441938	.	+	.	ID=gene-SPD_0437;Name=SPD_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0437
CP000410.2	Genbank	CDS	441375	441938	.	+	0	ID=cds-ABJ54703.1;Parent=gene-SPD_0437;Dbxref=NCBI_GP:ABJ54703.1;Name=ABJ54703.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0488%3B equivalent gene in S.pneumoniae R6 %3D spr0433;gbkey=CDS;locus_tag=SPD_0437;product=membrane protein%2C putative;protein_id=ABJ54703.1;transl_table=11
CP000410.2	Genbank	gene	441928	442578	.	+	.	ID=gene-SPD_0438;Name=SPD_0438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0438
CP000410.2	Genbank	CDS	441928	442578	.	+	0	ID=cds-ABJ55342.1;Parent=gene-SPD_0438;Dbxref=NCBI_GP:ABJ55342.1;Name=ABJ55342.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0489%3B equivalent gene in S.pneumoniae R6 %3D spr0434%3B identified by match to protein family HMM PF01569;gbkey=CDS;locus_tag=SPD_0438;product=PAP2 family protein;protein_id=ABJ55342.1;transl_table=11
CP000410.2	Genbank	gene	442606	442995	.	+	.	ID=gene-SPD_0439;Name=SPD_0439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0439
CP000410.2	Genbank	CDS	442606	442995	.	+	0	ID=cds-ABJ55483.1;Parent=gene-SPD_0439;Dbxref=NCBI_GP:ABJ55483.1;Name=ABJ55483.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0490%3B equivalent gene in S.pneumoniae R6 %3D spr0435;gbkey=CDS;locus_tag=SPD_0439;product=hypothetical protein;protein_id=ABJ55483.1;transl_table=11
CP000410.2	Genbank	gene	443000	443449	.	+	.	ID=gene-SPD_0440;Name=SPD_0440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0440
CP000410.2	Genbank	CDS	443000	443449	.	+	0	ID=cds-ABJ54166.1;Parent=gene-SPD_0440;Dbxref=NCBI_GP:ABJ54166.1;Name=ABJ54166.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0492%3B equivalent gene in S.pneumoniae R6 %3D spr0436;gbkey=CDS;locus_tag=SPD_0440;product=hypothetical protein;protein_id=ABJ54166.1;transl_table=11
CP000410.2	Genbank	gene	443577	444164	.	+	.	ID=gene-SPD_0441;Name=SPD_0441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0441
CP000410.2	Genbank	CDS	443577	444164	.	+	0	ID=cds-ABJ54962.1;Parent=gene-SPD_0441;Dbxref=NCBI_GP:ABJ54962.1;Name=ABJ54962.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0493%3B equivalent gene in S.pneumoniae R6 %3D spr0437%3B identified by match to protein family HMM PF05066;gbkey=CDS;locus_tag=SPD_0441;product=DNA-directed RNA polymerase%2C delta subunit%2C putative;protein_id=ABJ54962.1;transl_table=11
CP000410.2	Genbank	gene	444554	446161	.	+	.	ID=gene-SPD_0442;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SPD_0442
CP000410.2	Genbank	CDS	444554	446161	.	+	0	ID=cds-ABJ53877.1;Parent=gene-SPD_0442;Dbxref=NCBI_GP:ABJ53877.1;Name=ABJ53877.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0494%3B equivalent gene in S.pneumoniae R6 %3D spr0438%3B identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337;gbkey=CDS;gene=pyrG;locus_tag=SPD_0442;product=CTP synthase;protein_id=ABJ53877.1;transl_table=11
CP000410.2	Genbank	gene	446720	448351	.	-	.	ID=gene-SPD_0443;Name=SPD_0443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0443
CP000410.2	Genbank	CDS	446720	448351	.	-	0	ID=cds-ABJ53894.1;Parent=gene-SPD_0443;Dbxref=NCBI_GP:ABJ53894.1;Name=ABJ53894.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0496%3B equivalent gene in S.pneumoniae R6 %3D spr0439%3B identified by match to protein family HMM PF02690%3B match to protein family HMM TIGR00704;gbkey=CDS;locus_tag=SPD_0443;product=Na/Pi-cotransporter II-related protein;protein_id=ABJ53894.1;transl_table=11
CP000410.2	Genbank	gene	448716	453623	.	+	.	ID=gene-SPD_0444;Name=SPD_0444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0444
CP000410.2	Genbank	CDS	448716	453623	.	+	0	ID=cds-ABJ55223.1;Parent=gene-SPD_0444;Dbxref=NCBI_GP:ABJ55223.1;Name=ABJ55223.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0498%3B equivalent gene in S.pneumoniae R6 %3D spr0440%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF00754%3B match to protein family HMM PF03644%3B match to protein family HMM PF07501%3B match to protein family HMM PF07523%3B match to protein family HMM PF07554%3B match to protein family HMM TIGR01167;gbkey=CDS;locus_tag=SPD_0444;product=endo-beta-N-acetylglucosaminidase%2C putative;protein_id=ABJ55223.1;transl_table=11
CP000410.2	Genbank	gene	453713	454909	.	+	.	ID=gene-SPD_0445;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=SPD_0445
CP000410.2	Genbank	CDS	453713	454909	.	+	0	ID=cds-ABJ54881.1;Parent=gene-SPD_0445;Dbxref=NCBI_GP:ABJ54881.1;Name=ABJ54881.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0499%3B equivalent gene in S.pneumoniae R6 %3D spr0441%3B identified by match to protein family HMM PF00162;gbkey=CDS;gene=pgk;locus_tag=SPD_0445;product=phosphoglycerate kinase;protein_id=ABJ54881.1;transl_table=11
CP000410.2	Genbank	gene	455045	455572	.	+	.	ID=gene-SPD_0446;Name=SPD_0446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0446
CP000410.2	Genbank	CDS	455045	455572	.	+	0	ID=cds-ABJ53785.1;Parent=gene-SPD_0446;Dbxref=NCBI_GP:ABJ53785.1;Name=ABJ53785.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0500%3B equivalent gene in S.pneumoniae R6 %3D spr0442;gbkey=CDS;locus_tag=SPD_0446;product=membrane protein%2C putative;protein_id=ABJ53785.1;transl_table=11
CP000410.2	Genbank	gene	455649	456005	.	+	.	ID=gene-SPD_0447;Name=SPD_0447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0447
CP000410.2	Genbank	CDS	455649	456005	.	+	0	ID=cds-ABJ55455.1;Parent=gene-SPD_0447;Dbxref=NCBI_GP:ABJ55455.1;Name=ABJ55455.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0501%3B equivalent gene in S.pneumoniae R6 %3D spr0443%3B identified by match to protein family HMM PF00376;gbkey=CDS;locus_tag=SPD_0447;product=transcriptional regulator%2C MerR family protein;protein_id=ABJ55455.1;transl_table=11
CP000410.2	Genbank	gene	456042	457388	.	+	.	ID=gene-SPD_0448;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SPD_0448
CP000410.2	Genbank	CDS	456042	457388	.	+	0	ID=cds-ABJ54386.1;Parent=gene-SPD_0448;Dbxref=NCBI_GP:ABJ54386.1;Name=ABJ54386.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0502%3B equivalent gene in S.pneumoniae R6 %3D spr0444%3B identified by match to protein family HMM PF00120%3B match to protein family HMM PF03951%3B match to protein family HMM TIGR00653;gbkey=CDS;gene=glnA;locus_tag=SPD_0448;product=glutamine synthetase%2C type I;protein_id=ABJ54386.1;transl_table=11
CP000410.2	Genbank	gene	457861	457998	.	+	.	ID=gene-SPD_0449;Name=SPD_0449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0449
CP000410.2	Genbank	CDS	457861	457998	.	+	0	ID=cds-ABJ54418.1;Parent=gene-SPD_0449;Dbxref=NCBI_GP:ABJ54418.1;Name=ABJ54418.1;gbkey=CDS;locus_tag=SPD_0449;product=hypothetical protein;protein_id=ABJ54418.1;transl_table=11
CP000410.2	Genbank	gene	458168	459448	.	+	.	ID=gene-SPD_0451;Name=SPD_0451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0451
CP000410.2	Genbank	CDS	458168	459448	.	+	0	ID=cds-ABJ54176.1;Parent=gene-SPD_0451;Dbxref=NCBI_GP:ABJ54176.1;Name=ABJ54176.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0445%3B identified by match to protein family HMM PF01420;gbkey=CDS;locus_tag=SPD_0451;product=type I restriction-modification system%2C S subunit%2C putative;protein_id=ABJ54176.1;transl_table=11
CP000410.2	Genbank	gene	459402	460001	.	-	.	ID=gene-SPD_0450;Name=SPD_0450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0450
CP000410.2	Genbank	CDS	459402	460001	.	-	0	ID=cds-ABJ55250.1;Parent=gene-SPD_0450;Dbxref=NCBI_GP:ABJ55250.1;Name=ABJ55250.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0507%3B equivalent gene in S.pneumoniae R6 %3D spr0446%3B identified by match to protein family HMM PF01420;gbkey=CDS;locus_tag=SPD_0450;product=type I restriction-modification system%2C S subunit%2C putative;protein_id=ABJ55250.1;transl_table=11
CP000410.2	Genbank	gene	460012	460809	.	-	.	ID=gene-SPD_0452;Name=SPD_0452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0452
CP000410.2	Genbank	CDS	460012	460809	.	-	0	ID=cds-ABJ54057.1;Parent=gene-SPD_0452;Dbxref=NCBI_GP:ABJ54057.1;Name=ABJ54057.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0506%3B equivalent gene in S.pneumoniae R6 %3D spr0447%3B identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=SPD_0452;product=integrase/recombinase%2C phage integrase family protein;protein_id=ABJ54057.1;transl_table=11
CP000410.2	Genbank	gene	460866	462434	.	-	.	ID=gene-SPD_0453;Name=hsdS;gbkey=Gene;gene=hsdS;gene_biotype=protein_coding;locus_tag=SPD_0453
CP000410.2	Genbank	CDS	460866	462434	.	-	0	ID=cds-ABJ53819.1;Parent=gene-SPD_0453;Dbxref=NCBI_GP:ABJ53819.1;Name=ABJ53819.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0448%3B identified by match to protein family HMM PF01420;gbkey=CDS;gene=hsdS;locus_tag=SPD_0453;product=type I restriction-modification system%2C S subunit;protein_id=ABJ53819.1;transl_table=11
CP000410.2	Genbank	gene	462434	463897	.	-	.	ID=gene-SPD_0454;Name=hsdM;gbkey=Gene;gene=hsdM;gene_biotype=protein_coding;locus_tag=SPD_0454
CP000410.2	Genbank	CDS	462434	463897	.	-	0	ID=cds-ABJ54850.1;Parent=gene-SPD_0454;Dbxref=NCBI_GP:ABJ54850.1;Name=ABJ54850.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0509%3B equivalent gene in S.pneumoniae R6 %3D spr0449%3B identified by match to protein family HMM PF02384%3B match to protein family HMM PF05175;gbkey=CDS;gene=hsdM;locus_tag=SPD_0454;product=type I restriction-modification system%2C M subunit;protein_id=ABJ54850.1;transl_table=11
CP000410.2	Genbank	gene	463910	466243	.	-	.	ID=gene-SPD_0455;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=SPD_0455
CP000410.2	Genbank	CDS	463910	466243	.	-	0	ID=cds-ABJ53942.1;Parent=gene-SPD_0455;Dbxref=NCBI_GP:ABJ53942.1;Name=ABJ53942.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0510%3B equivalent gene in S.pneumoniae R6 %3D spr0450%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851;gbkey=CDS;gene=hsdR;locus_tag=SPD_0455;product=type I restriction-modification system%2C R subunit;protein_id=ABJ53942.1;transl_table=11
CP000410.2	Genbank	gene	466616	466816	.	+	.	ID=gene-SPD_0456;Name=SPD_0456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0456
CP000410.2	Genbank	CDS	466616	466816	.	+	0	ID=cds-ABJ55210.1;Parent=gene-SPD_0456;Dbxref=NCBI_GP:ABJ55210.1;Name=ABJ55210.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0512%3B equivalent gene in S.pneumoniae R6 %3D spr0451;gbkey=CDS;locus_tag=SPD_0456;product=hypothetical protein;protein_id=ABJ55210.1;transl_table=11
CP000410.2	Genbank	gene	466851	467360	.	+	.	ID=gene-SPD_0457;Name=SPD_0457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0457
CP000410.2	Genbank	CDS	466851	467360	.	+	0	ID=cds-ABJ53721.1;Parent=gene-SPD_0457;Dbxref=NCBI_GP:ABJ53721.1;Name=ABJ53721.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0514%3B equivalent gene in S.pneumoniae R6 %3D spr0452;gbkey=CDS;locus_tag=SPD_0457;product=hypothetical protein;protein_id=ABJ53721.1;transl_table=11
CP000410.2	Genbank	gene	467524	468558	.	+	.	ID=gene-SPD_0458;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=SPD_0458
CP000410.2	Genbank	CDS	467524	468558	.	+	0	ID=cds-ABJ55034.1;Parent=gene-SPD_0458;Dbxref=NCBI_GP:ABJ55034.1;Name=ABJ55034.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0515%3B equivalent gene in S.pneumoniae R6 %3D spr0453%3B identified by match to protein family HMM PF01628%3B match to protein family HMM PF08220%3B match to protein family HMM TIGR00331;gbkey=CDS;gene=hrcA;locus_tag=SPD_0458;product=heat-inducible transcription repressor HrcA;protein_id=ABJ55034.1;transl_table=11
CP000410.2	Genbank	gene	468585	469109	.	+	.	ID=gene-SPD_0459;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=SPD_0459
CP000410.2	Genbank	CDS	468585	469109	.	+	0	ID=cds-ABJ55365.1;Parent=gene-SPD_0459;Dbxref=NCBI_GP:ABJ55365.1;Name=ABJ55365.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0516%3B equivalent gene in S.pneumoniae R6 %3D spr0454%3B identified by match to protein family HMM PF01025;gbkey=CDS;gene=grpE;locus_tag=SPD_0459;product=heat shock protein GrpE;protein_id=ABJ55365.1;transl_table=11
CP000410.2	Genbank	gene	469589	471412	.	+	.	ID=gene-SPD_0460;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SPD_0460
CP000410.2	Genbank	CDS	469589	471412	.	+	0	ID=cds-ABJ54794.1;Parent=gene-SPD_0460;Dbxref=NCBI_GP:ABJ54794.1;Name=ABJ54794.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0517%3B equivalent gene in S.pneumoniae R6 %3D spr0455%3B identified by match to protein family HMM PF00012%3B match to protein family HMM TIGR02350;gbkey=CDS;gene=dnaK;locus_tag=SPD_0460;product=chaperone protein DnaK;protein_id=ABJ54794.1;transl_table=11
CP000410.2	Genbank	gene	472172	473290	.	+	.	ID=gene-SPD_0461;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=SPD_0461
CP000410.2	Genbank	CDS	472172	473290	.	+	0	ID=cds-ABJ55125.1;Parent=gene-SPD_0461;Dbxref=NCBI_GP:ABJ55125.1;Name=ABJ55125.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0519%3B equivalent gene in S.pneumoniae R6 %3D spr0456%3B identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349;gbkey=CDS;gene=dnaJ;locus_tag=SPD_0461;product=chaperone protein DnaJ;protein_id=ABJ55125.1;transl_table=11
CP000410.2	Genbank	gene	473625	473912	.	-	.	ID=gene-SPD_0462;Name=SPD_0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0462
CP000410.2	Genbank	CDS	473625	473912	.	-	0	ID=cds-ABJ54533.1;Parent=gene-SPD_0462;Dbxref=NCBI_GP:ABJ54533.1;Name=ABJ54533.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0520%3B equivalent gene in S.pneumoniae R6 %3D spr0457;gbkey=CDS;locus_tag=SPD_0462;product=hypothetical protein;protein_id=ABJ54533.1;transl_table=11
CP000410.2	Genbank	gene	473922	474332	.	-	.	ID=gene-SPD_0463;Name=SPD_0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0463
CP000410.2	Genbank	CDS	473922	474332	.	-	0	ID=cds-ABJ54673.1;Parent=gene-SPD_0463;Dbxref=NCBI_GP:ABJ54673.1;Name=ABJ54673.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0521%3B equivalent gene in S.pneumoniae R6 %3D spr0458%3B identified by match to protein family HMM PF01230;gbkey=CDS;locus_tag=SPD_0463;product=Hit-like protein involved in cell-cycle regulation%2C putative;protein_id=ABJ54673.1;transl_table=11
CP000410.2	Genbank	gene	474400	475131	.	+	.	ID=gene-SPD_0464;Name=SPD_0464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0464
CP000410.2	Genbank	CDS	474400	475131	.	+	0	ID=cds-ABJ54041.1;Parent=gene-SPD_0464;Dbxref=NCBI_GP:ABJ54041.1;Name=ABJ54041.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0522%3B equivalent gene in S.pneumoniae R6 %3D spr0459%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0464;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54041.1;transl_table=11
CP000410.2	Genbank	gene	475128	476177	.	+	.	ID=gene-SPD_0465;Name=SPD_0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0465
CP000410.2	Genbank	CDS	475128	476177	.	+	0	ID=cds-ABJ54872.1;Parent=gene-SPD_0465;Dbxref=NCBI_GP:ABJ54872.1;Name=ABJ54872.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0523%3B equivalent gene in S.pneumoniae R6 %3D spr0460%3B identified by match to protein family HMM PF05975;gbkey=CDS;locus_tag=SPD_0465;product=ABC transporter%2C permease protein%2C putative;protein_id=ABJ54872.1;transl_table=11
CP000410.2	Genbank	gene	476345	476674	.	-	.	ID=gene-SPD_0466;Name=SPD_0466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0466
CP000410.2	Genbank	CDS	476345	476674	.	-	0	ID=cds-ABJ54078.1;Parent=gene-SPD_0466;Dbxref=NCBI_GP:ABJ54078.1;Name=ABJ54078.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0524%3B equivalent gene in S.pneumoniae R6 %3D spr0461;gbkey=CDS;locus_tag=SPD_0466;product=hypothetical protein;protein_id=ABJ54078.1;transl_table=11
CP000410.2	Genbank	gene	476950	477288	.	+	.	ID=gene-SPD_0467;Name=blpS;gbkey=Gene;gene=blpS;gene_biotype=protein_coding;locus_tag=SPD_0467
CP000410.2	Genbank	CDS	476950	477288	.	+	0	ID=cds-ABJ54900.1;Parent=gene-SPD_0467;Dbxref=NCBI_GP:ABJ54900.1;Name=ABJ54900.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0525%3B equivalent gene in S.pneumoniae R6 %3D spr0462%3B identified by match to protein family HMM PF04397;gbkey=CDS;gene=blpS;locus_tag=SPD_0467;product=BlpS protein;protein_id=ABJ54900.1;transl_table=11
CP000410.2	Genbank	gene	477293	478030	.	+	.	ID=gene-SPD_0468;Name=blpR;gbkey=Gene;gene=blpR;gene_biotype=protein_coding;locus_tag=SPD_0468
CP000410.2	Genbank	CDS	477293	478030	.	+	0	ID=cds-ABJ53626.1;Parent=gene-SPD_0468;Dbxref=NCBI_GP:ABJ53626.1;Name=ABJ53626.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0526%3B equivalent gene in S.pneumoniae R6 %3D spr0463%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;gene=blpR;locus_tag=SPD_0468;product=response regulator BlpR;protein_id=ABJ53626.1;transl_table=11
CP000410.2	Genbank	gene	478044	479384	.	+	.	ID=gene-SPD_0469;Name=blpH;gbkey=Gene;gene=blpH;gene_biotype=protein_coding;locus_tag=SPD_0469
CP000410.2	Genbank	CDS	478044	479384	.	+	0	ID=cds-ABJ53623.1;Parent=gene-SPD_0469;Dbxref=NCBI_GP:ABJ53623.1;Name=ABJ53623.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0464%3B identified by match to protein family HMM PF02518;gbkey=CDS;gene=blpH;locus_tag=SPD_0469;product=histidine kinase BlpH%2C putative;protein_id=ABJ53623.1;transl_table=11
CP000410.2	Genbank	gene	479426	479581	.	-	.	ID=gene-SPD_0470;Name=blpC;gbkey=Gene;gene=blpC;gene_biotype=protein_coding;locus_tag=SPD_0470
CP000410.2	Genbank	CDS	479426	479581	.	-	0	ID=cds-ABJ54510.1;Parent=gene-SPD_0470;Dbxref=NCBI_GP:ABJ54510.1;Name=ABJ54510.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0528%3B equivalent gene in S.pneumoniae R6 %3D spr0465%3B identified by match to protein family HMM PF08128%3B match to protein family HMM TIGR01847;gbkey=CDS;gene=blpC;locus_tag=SPD_0470;product=peptide pheromone BlpC;protein_id=ABJ54510.1;transl_table=11
CP000410.2	Genbank	pseudogene	479638	480999	.	-	.	ID=gene-SPD_0471;Name=blpB;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0529%3B equivalent gene in S.pneumoniae R6 %3D spr0467. The R6 version has the same stop mutation%3B BlpC ABC transporter%2C authentic truncation;gbkey=Gene;gene=blpB;gene_biotype=pseudogene;locus_tag=SPD_0471;pseudo=true
CP000410.2	Genbank	pseudogene	481010	483167	.	-	.	ID=gene-SPD_0472;Name=blpA;Note=equivalent gene in S.pneumoniae R6 %3D spr0469%3B BlpC ABC transporter%2C ATP-binding protein%2C authentic frameshift%3B identified by match to protein family HMM PF03412;gbkey=Gene;gene=blpA;gene_biotype=pseudogene;locus_tag=SPD_0472;pseudo=true
CP000410.2	Genbank	gene	483722	484411	.	+	.	ID=gene-SPD_0473;Name=blpY;gbkey=Gene;gene=blpY;gene_biotype=protein_coding;locus_tag=SPD_0473
CP000410.2	Genbank	CDS	483722	484411	.	+	0	ID=cds-ABJ54598.1;Parent=gene-SPD_0473;Dbxref=NCBI_GP:ABJ54598.1;Name=ABJ54598.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0545%3B equivalent gene in S.pneumoniae R6 %3D spr0472%3B identified by match to protein family HMM PF02517;gbkey=CDS;gene=blpY;locus_tag=SPD_0473;product=immunity protein BlpY;protein_id=ABJ54598.1;transl_table=11
CP000410.2	Genbank	gene	484453	484686	.	+	.	ID=gene-SPD_0474;Name=SPD_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0474
CP000410.2	Genbank	CDS	484453	484686	.	+	0	ID=cds-ABJ55431.1;Parent=gene-SPD_0474;Dbxref=NCBI_GP:ABJ55431.1;Name=ABJ55431.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0546%3B equivalent gene in S.pneumoniae R6 %3D spr0473;gbkey=CDS;locus_tag=SPD_0474;product=hypothetical protein;protein_id=ABJ55431.1;transl_table=11
CP000410.2	Genbank	gene	484837	485448	.	+	.	ID=gene-SPD_0475;Name=SPD_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0475
CP000410.2	Genbank	CDS	484837	485448	.	+	0	ID=cds-ABJ54135.1;Parent=gene-SPD_0475;Dbxref=NCBI_GP:ABJ54135.1;Name=ABJ54135.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0547%3B equivalent gene in S.pneumoniae R6 %3D spr0474%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_0475;product=CAAX amino terminal protease family protein;protein_id=ABJ54135.1;transl_table=11
CP000410.2	Genbank	gene	485609	486403	.	+	.	ID=gene-SPD_0476;Name=SPD_0476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0476
CP000410.2	Genbank	CDS	485609	486403	.	+	0	ID=cds-ABJ55230.1;Parent=gene-SPD_0476;Dbxref=NCBI_GP:ABJ55230.1;Name=ABJ55230.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0549%3B equivalent gene in S.pneumoniae R6 %3D spr0475%3B identified by match to protein family HMM PF01636;gbkey=CDS;locus_tag=SPD_0476;product=phosphotransferase enzyme family protein;protein_id=ABJ55230.1;transl_table=11
CP000410.2	Genbank	gene	486400	487035	.	+	.	ID=gene-SPD_0477;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=SPD_0477
CP000410.2	Genbank	CDS	486400	487035	.	+	0	ID=cds-ABJ53918.1;Parent=gene-SPD_0477;Dbxref=NCBI_GP:ABJ53918.1;Name=ABJ53918.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0550%3B equivalent gene in S.pneumoniae R6 %3D spr0476%3B identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091;gbkey=CDS;gene=trmB;locus_tag=SPD_0477;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=ABJ53918.1;transl_table=11
CP000410.2	Genbank	gene	487161	487640	.	+	.	ID=gene-SPD_0478;Name=SPD_0478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0478
CP000410.2	Genbank	CDS	487161	487640	.	+	0	ID=cds-ABJ54971.1;Parent=gene-SPD_0478;Dbxref=NCBI_GP:ABJ54971.1;Name=ABJ54971.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0552%3B equivalent gene in S.pneumoniae R6 %3D spr0477%3B identified by match to protein family HMM PF02576;gbkey=CDS;locus_tag=SPD_0478;product=hypothetical protein;protein_id=ABJ54971.1;transl_table=11
CP000410.2	Genbank	gene	487684	488820	.	+	.	ID=gene-SPD_0479;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SPD_0479
CP000410.2	Genbank	CDS	487684	488820	.	+	0	ID=cds-ABJ53660.1;Parent=gene-SPD_0479;Dbxref=NCBI_GP:ABJ53660.1;Name=ABJ53660.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0553%3B equivalent gene in S.pneumoniae R6 %3D spr0478%3B identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR01953;gbkey=CDS;gene=nusA;locus_tag=SPD_0479;product=transcription termination factor NusA;protein_id=ABJ53660.1;transl_table=11
CP000410.2	Genbank	gene	488842	489135	.	+	.	ID=gene-SPD_0480;Name=SPD_0480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0480
CP000410.2	Genbank	CDS	488842	489135	.	+	0	ID=cds-ABJ54600.1;Parent=gene-SPD_0480;Dbxref=NCBI_GP:ABJ54600.1;Name=ABJ54600.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0554%3B equivalent gene in S.pneumoniae R6 %3D spr0479%3B identified by match to protein family HMM PF04296;gbkey=CDS;locus_tag=SPD_0480;product=hypothetical protein;protein_id=ABJ54600.1;transl_table=11
CP000410.2	Genbank	gene	489128	489427	.	+	.	ID=gene-SPD_0481;Name=SPD_0481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0481
CP000410.2	Genbank	CDS	489128	489427	.	+	0	ID=cds-ABJ54018.1;Parent=gene-SPD_0481;Dbxref=NCBI_GP:ABJ54018.1;Name=ABJ54018.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0555%3B equivalent gene in S.pneumoniae R6 %3D spr0480%3B identified by match to protein family HMM PF01248;gbkey=CDS;locus_tag=SPD_0481;product=ribosomal protein L7A family protein;protein_id=ABJ54018.1;transl_table=11
CP000410.2	Genbank	gene	489444	492236	.	+	.	ID=gene-SPD_0482;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SPD_0482
CP000410.2	Genbank	CDS	489444	492236	.	+	0	ID=cds-ABJ54884.1;Parent=gene-SPD_0482;Dbxref=NCBI_GP:ABJ54884.1;Name=ABJ54884.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0556%3B equivalent gene in S.pneumoniae R6 %3D spr0481%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487;gbkey=CDS;gene=infB;locus_tag=SPD_0482;product=initiation factor IF-2;protein_id=ABJ54884.1;transl_table=11
CP000410.2	Genbank	gene	492487	492837	.	+	.	ID=gene-SPD_0483;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SPD_0483
CP000410.2	Genbank	CDS	492487	492837	.	+	0	ID=cds-ABJ54051.1;Parent=gene-SPD_0483;Dbxref=NCBI_GP:ABJ54051.1;Name=ABJ54051.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0557%3B equivalent gene in S.pneumoniae R6 %3D spr0482%3B identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082;gbkey=CDS;gene=rbfA;locus_tag=SPD_0483;product=ribosome-binding factor A;protein_id=ABJ54051.1;transl_table=11
CP000410.2	Genbank	gene	493080	493895	.	+	.	ID=gene-SPD_0484;Name=SPD_0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0484
CP000410.2	Genbank	CDS	493080	493895	.	+	0	ID=cds-ABJ54701.1;Parent=gene-SPD_0484;Dbxref=NCBI_GP:ABJ54701.1;Name=ABJ54701.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0558%3B equivalent gene in S.pneumoniae R6 %3D spr0483;gbkey=CDS;locus_tag=SPD_0484;product=hypothetical protein;protein_id=ABJ54701.1;transl_table=11
CP000410.2	Genbank	gene	493897	494079	.	+	.	ID=gene-SPD_0485;Name=SPD_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0485
CP000410.2	Genbank	CDS	493897	494079	.	+	0	ID=cds-ABJ53799.1;Parent=gene-SPD_0485;Dbxref=NCBI_GP:ABJ53799.1;Name=ABJ53799.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0484;gbkey=CDS;locus_tag=SPD_0485;product=hypothetical protein;protein_id=ABJ53799.1;transl_table=11
CP000410.2	Genbank	gene	494076	494216	.	+	.	ID=gene-SPD_0486;Name=SPD_0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0486
CP000410.2	Genbank	CDS	494076	494216	.	+	0	ID=cds-ABJ54138.1;Parent=gene-SPD_0486;Dbxref=NCBI_GP:ABJ54138.1;Name=ABJ54138.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_0486;product=hypothetical protein;protein_id=ABJ54138.1;transl_table=11
CP000410.2	Genbank	gene	494517	494762	.	+	.	ID=gene-SPD_0487;Name=SPD_0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0487
CP000410.2	Genbank	CDS	494517	494762	.	+	0	ID=cds-ABJ55506.1;Parent=gene-SPD_0487;Dbxref=NCBI_GP:ABJ55506.1;Name=ABJ55506.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0561%3B equivalent gene in S.pneumoniae R6 %3D spr0485;gbkey=CDS;locus_tag=SPD_0487;product=hypothetical protein;protein_id=ABJ55506.1;transl_table=11
CP000410.2	Genbank	gene	494762	496096	.	+	.	ID=gene-SPD_0488;Name=SPD_0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0488
CP000410.2	Genbank	CDS	494762	496096	.	+	0	ID=cds-ABJ53870.1;Parent=gene-SPD_0488;Dbxref=NCBI_GP:ABJ53870.1;Name=ABJ53870.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0562%3B equivalent gene in S.pneumoniae R6 %3D spr0486%3B identified by match to protein family HMM PF01814%3B match to protein family HMM PF04282;gbkey=CDS;locus_tag=SPD_0488;product=hypothetical protein;protein_id=ABJ53870.1;transl_table=11
CP000410.2	Genbank	gene	496106	496360	.	+	.	ID=gene-SPD_0489;Name=SPD_0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0489
CP000410.2	Genbank	CDS	496106	496360	.	+	0	ID=cds-ABJ55256.1;Parent=gene-SPD_0489;Dbxref=NCBI_GP:ABJ55256.1;Name=ABJ55256.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0563%3B equivalent gene in S.pneumoniae R6 %3D spr0487;gbkey=CDS;locus_tag=SPD_0489;product=hypothetical protein;protein_id=ABJ55256.1;transl_table=11
CP000410.2	Genbank	gene	496456	496851	.	+	.	ID=gene-SPD_0490;Name=SPD_0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0490
CP000410.2	Genbank	CDS	496456	496851	.	+	0	ID=cds-ABJ54036.1;Parent=gene-SPD_0490;Dbxref=NCBI_GP:ABJ54036.1;Name=ABJ54036.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0564%3B equivalent gene in S.pneumoniae R6 %3D spr0488;gbkey=CDS;locus_tag=SPD_0490;product=hypothetical protein;protein_id=ABJ54036.1;transl_table=11
CP000410.2	Genbank	gene	497263	497712	.	+	.	ID=gene-SPD_0491;Name=SPD_0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0491
CP000410.2	Genbank	CDS	497263	497712	.	+	0	ID=cds-ABJ55174.1;Parent=gene-SPD_0491;Dbxref=NCBI_GP:ABJ55174.1;Name=ABJ55174.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0565%3B equivalent gene in S.pneumoniae R6 %3D spr0489;gbkey=CDS;locus_tag=SPD_0491;product=hypothetical protein;protein_id=ABJ55174.1;transl_table=11
CP000410.2	Genbank	gene	497699	498256	.	+	.	ID=gene-SPD_0492;Name=SPD_0492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0492
CP000410.2	Genbank	CDS	497699	498256	.	+	0	ID=cds-ABJ55457.1;Parent=gene-SPD_0492;Dbxref=NCBI_GP:ABJ55457.1;Name=ABJ55457.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0490%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0492;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55457.1;transl_table=11
CP000410.2	Genbank	gene	498258	499220	.	+	.	ID=gene-SPD_0493;Name=SPD_0493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0493
CP000410.2	Genbank	CDS	498258	499220	.	+	0	ID=cds-ABJ54009.1;Parent=gene-SPD_0493;Dbxref=NCBI_GP:ABJ54009.1;Name=ABJ54009.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0491;gbkey=CDS;locus_tag=SPD_0493;product=hypothetical protein;protein_id=ABJ54009.1;transl_table=11
CP000410.2	Genbank	gene	499232	501883	.	+	.	ID=gene-SPD_0494;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=SPD_0494
CP000410.2	Genbank	CDS	499232	501883	.	+	0	ID=cds-ABJ54638.1;Parent=gene-SPD_0494;Dbxref=NCBI_GP:ABJ54638.1;Name=ABJ54638.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0568%3B equivalent gene in S.pneumoniae R6 %3D spr0492%3B identified by match to protein family HMM PF00133%3B match to protein family HMM TIGR00422;gbkey=CDS;gene=valS;locus_tag=SPD_0494;product=valyl-tRNA synthetase;protein_id=ABJ54638.1;transl_table=11
CP000410.2	Genbank	gene	501953	502708	.	+	.	ID=gene-SPD_0495;Name=SPD_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0495
CP000410.2	Genbank	CDS	501953	502708	.	+	0	ID=cds-ABJ55152.1;Parent=gene-SPD_0495;Dbxref=NCBI_GP:ABJ55152.1;Name=ABJ55152.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0493;gbkey=CDS;locus_tag=SPD_0495;product=hypothetical protein;protein_id=ABJ55152.1;transl_table=11
CP000410.2	Genbank	gene	502991	503794	.	+	.	ID=gene-SPD_0496;Name=SPD_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0496
CP000410.2	Genbank	CDS	502991	503794	.	+	0	ID=cds-ABJ54309.1;Parent=gene-SPD_0496;Dbxref=NCBI_GP:ABJ54309.1;Name=ABJ54309.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0571%3B equivalent gene in S.pneumoniae R6 %3D spr0494%3B identified by match to protein family HMM PF02661;gbkey=CDS;locus_tag=SPD_0496;product=cell filamentation protein Fic-related protein;protein_id=ABJ54309.1;transl_table=11
CP000410.2	Genbank	pseudogene	503999	504388	.	-	.	ID=gene-SPD_0497;Name=SPD_0497;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr0496%3B IS3-Spn1%2C transposase%2C degenerate%3B identified by match to protein family HMM PF00665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0497;pseudo=true
CP000410.2	Genbank	pseudogene	504465	504722	.	-	.	ID=gene-SPD_0498;Name=SPD_0498;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr0497%3B truncated IS3-Spn1%2C transposase%3B authentic frameshift mutation that leads to truncation after amino acid 85;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0498;pseudo=true
CP000410.2	Genbank	gene	504948	505160	.	-	.	ID=gene-SPD_0499;Name=SPD_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0499
CP000410.2	Genbank	CDS	504948	505160	.	-	0	ID=cds-ABJ54697.1;Parent=gene-SPD_0499;Dbxref=NCBI_GP:ABJ54697.1;Name=ABJ54697.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1596%3B equivalent gene in S.pneumoniae R6 %3D spr0498;gbkey=CDS;locus_tag=SPD_0499;product=hypothetical protein;protein_id=ABJ54697.1;transl_table=11
CP000410.2	Genbank	pseudogene	505575	508102	.	+	.	ID=gene-SPD_0500;Name=SPD_0500;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0574%3B equivalent gene in S.pneumoniae R6 %3D spr0499. The R6 version has the same mutations relative to TIGR4 and orthologs%3B conserved hypothetical protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0500;pseudo=true
CP000410.2	Genbank	gene	508403	509242	.	+	.	ID=gene-SPD_0501;Name=licT;gbkey=Gene;gene=licT;gene_biotype=protein_coding;locus_tag=SPD_0501
CP000410.2	Genbank	CDS	508403	509242	.	+	0	ID=cds-ABJ55101.1;Parent=gene-SPD_0501;Dbxref=NCBI_GP:ABJ55101.1;Name=ABJ55101.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0576%3B equivalent gene in S.pneumoniae R6 %3D spr0504%3B identified by match to protein family HMM PF00874%3B match to protein family HMM PF03123;gbkey=CDS;gene=licT;locus_tag=SPD_0501;product=transcription antiterminator Lict;protein_id=ABJ55101.1;transl_table=11
CP000410.2	Genbank	gene	509260	511098	.	+	.	ID=gene-SPD_0502;Name=SPD_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0502
CP000410.2	Genbank	CDS	509260	511098	.	+	0	ID=cds-ABJ53915.1;Parent=gene-SPD_0502;Dbxref=NCBI_GP:ABJ53915.1;Name=ABJ53915.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0577%3B equivalent gene in S.pneumoniae R6 %3D spr0505%3B identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR01995;gbkey=CDS;locus_tag=SPD_0502;product=PTS system%2C beta-glucosides-specific IIABC components;protein_id=ABJ53915.1;transl_table=11
CP000410.2	Genbank	gene	511111	512526	.	+	.	ID=gene-SPD_0503;Name=bglA-2;gbkey=Gene;gene=bglA-2;gene_biotype=protein_coding;locus_tag=SPD_0503
CP000410.2	Genbank	CDS	511111	512526	.	+	0	ID=cds-ABJ54260.1;Parent=gene-SPD_0503;Dbxref=NCBI_GP:ABJ54260.1;Name=ABJ54260.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0578%3B equivalent gene in S.pneumoniae R6 %3D spr0506%3B identified by match to protein family HMM PF00232;gbkey=CDS;gene=bglA-2;locus_tag=SPD_0503;product=6-phospho-beta-glucosidase;protein_id=ABJ54260.1;transl_table=11
CP000410.2	Genbank	gene	513118	514164	.	+	.	ID=gene-SPD_0504;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=SPD_0504
CP000410.2	Genbank	CDS	513118	514164	.	+	0	ID=cds-ABJ55158.1;Parent=gene-SPD_0504;Dbxref=NCBI_GP:ABJ55158.1;Name=ABJ55158.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0579%3B equivalent gene in S.pneumoniae R6 %3D spr0507%3B identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468;gbkey=CDS;gene=pheS;locus_tag=SPD_0504;product=phenylalanyl-tRNA synthetase%2C alpha subunit;protein_id=ABJ55158.1;transl_table=11
CP000410.2	Genbank	gene	514164	514673	.	+	.	ID=gene-SPD_0505;Name=SPD_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0505
CP000410.2	Genbank	CDS	514164	514673	.	+	0	ID=cds-ABJ54520.1;Parent=gene-SPD_0505;Dbxref=NCBI_GP:ABJ54520.1;Name=ABJ54520.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0580%3B equivalent gene in S.pneumoniae R6 %3D spr0508%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0505;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54520.1;transl_table=11
CP000410.2	Genbank	gene	514750	517152	.	+	.	ID=gene-SPD_0506;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SPD_0506
CP000410.2	Genbank	CDS	514750	517152	.	+	0	ID=cds-ABJ55400.1;Parent=gene-SPD_0506;Dbxref=NCBI_GP:ABJ55400.1;Name=ABJ55400.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0581%3B equivalent gene in S.pneumoniae R6 %3D spr0509%3B identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472;gbkey=CDS;gene=pheT;locus_tag=SPD_0506;product=phenylalanyl-tRNA synthetase%2C beta subunit;protein_id=ABJ55400.1;transl_table=11
CP000410.2	Genbank	gene	517220	518221	.	-	.	ID=gene-SPD_0507;Name=SPD_0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0507
CP000410.2	Genbank	CDS	517220	518221	.	-	0	ID=cds-ABJ54287.1;Parent=gene-SPD_0507;Dbxref=NCBI_GP:ABJ54287.1;Name=ABJ54287.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0582%3B equivalent gene in S.pneumoniae R6 %3D spr0510%3B identified by match to protein family HMM PF03372;gbkey=CDS;locus_tag=SPD_0507;product=hypothetical protein;protein_id=ABJ54287.1;transl_table=11
CP000410.2	Genbank	pseudogene	518377	518827	.	+	.	ID=gene-SPD_0508;Name=SPD_0508;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0915%3B equivalent gene in S.pneumoniae R6 %3D spr0511%3B IS1239%2C transposase%2C putative%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0508;pseudo=true
CP000410.2	Genbank	gene	518950	519216	.	+	.	ID=gene-SPD_0509;Name=SPD_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0509
CP000410.2	Genbank	CDS	518950	519216	.	+	0	ID=cds-ABJ54148.1;Parent=gene-SPD_0509;Dbxref=NCBI_GP:ABJ54148.1;Name=ABJ54148.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1144%3B equivalent gene in S.pneumoniae R6 %3D spr0513%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_0509;product=hypothetical protein;protein_id=ABJ54148.1;transl_table=11
CP000410.2	Genbank	gene	519477	521726	.	+	.	ID=gene-SPD_0510;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=SPD_0510
CP000410.2	Genbank	CDS	519477	521726	.	+	0	ID=cds-ABJ55286.1;Parent=gene-SPD_0510;Dbxref=NCBI_GP:ABJ55286.1;Name=ABJ55286.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0585%3B equivalent gene in S.pneumoniae R6 %3D spr0514%3B identified by match to protein family HMM PF01717%3B match to protein family HMM TIGR01371;gbkey=CDS;gene=metE;locus_tag=SPD_0510;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=ABJ55286.1;transl_table=11
CP000410.2	Genbank	gene	521790	522656	.	+	.	ID=gene-SPD_0511;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=SPD_0511
CP000410.2	Genbank	CDS	521790	522656	.	+	0	ID=cds-ABJ54889.1;Parent=gene-SPD_0511;Dbxref=NCBI_GP:ABJ54889.1;Name=ABJ54889.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0586%3B equivalent gene in S.pneumoniae R6 %3D spr0515%3B identified by match to protein family HMM PF02219%3B match to protein family HMM TIGR00676;gbkey=CDS;gene=metF;locus_tag=SPD_0511;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=ABJ54889.1;transl_table=11
CP000410.2	Genbank	gene	523227	525554	.	+	.	ID=gene-SPD_0512;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=SPD_0512
CP000410.2	Genbank	CDS	523227	525554	.	+	0	ID=cds-ABJ54028.1;Parent=gene-SPD_0512;Dbxref=NCBI_GP:ABJ54028.1;Name=ABJ54028.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0588%3B equivalent gene in S.pneumoniae R6 %3D spr0516%3B identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726;gbkey=CDS;gene=pnp;locus_tag=SPD_0512;product=polyribonucleotide nucleotidyltransferase;protein_id=ABJ54028.1;transl_table=11
CP000410.2	Genbank	gene	525570	526187	.	+	.	ID=gene-SPD_0513;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SPD_0513
CP000410.2	Genbank	CDS	525570	526187	.	+	0	ID=cds-ABJ54769.1;Parent=gene-SPD_0513;Dbxref=NCBI_GP:ABJ54769.1;Name=ABJ54769.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0589%3B equivalent gene in S.pneumoniae R6 %3D spr0517%3B identified by match to protein family HMM TIGR01172;gbkey=CDS;gene=cysE;locus_tag=SPD_0513;product=serine O-acetyltransferase;protein_id=ABJ54769.1;transl_table=11
CP000410.2	Genbank	gene	526199	527083	.	+	.	ID=gene-SPD_0514;Name=SPD_0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0514
CP000410.2	Genbank	CDS	526199	527083	.	+	0	ID=cds-ABJ53752.1;Parent=gene-SPD_0514;Dbxref=NCBI_GP:ABJ53752.1;Name=ABJ53752.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0590%3B equivalent gene in S.pneumoniae R6 %3D spr0518%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0514;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ53752.1;transl_table=11
CP000410.2	Genbank	gene	527165	528508	.	+	.	ID=gene-SPD_0515;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SPD_0515
CP000410.2	Genbank	CDS	527165	528508	.	+	0	ID=cds-ABJ55485.1;Parent=gene-SPD_0515;Dbxref=NCBI_GP:ABJ55485.1;Name=ABJ55485.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0591%3B equivalent gene in S.pneumoniae R6 %3D spr0519%3B identified by match to protein family HMM PF01406%3B match to protein family HMM TIGR00435;gbkey=CDS;gene=cysS;locus_tag=SPD_0515;product=cysteinyl-tRNA synthetase;protein_id=ABJ55485.1;transl_table=11
CP000410.2	Genbank	gene	528501	528887	.	+	.	ID=gene-SPD_0516;Name=SPD_0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0516
CP000410.2	Genbank	CDS	528501	528887	.	+	0	ID=cds-ABJ53667.1;Parent=gene-SPD_0516;Dbxref=NCBI_GP:ABJ53667.1;Name=ABJ53667.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0592%3B equivalent gene in S.pneumoniae R6 %3D spr0520;gbkey=CDS;locus_tag=SPD_0516;product=hypothetical protein;protein_id=ABJ53667.1;transl_table=11
CP000410.2	Genbank	gene	528891	529775	.	+	.	ID=gene-SPD_0517;Name=SPD_0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0517
CP000410.2	Genbank	CDS	528891	529775	.	+	0	ID=cds-ABJ54876.1;Parent=gene-SPD_0517;Dbxref=NCBI_GP:ABJ54876.1;Name=ABJ54876.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0593%3B equivalent gene in S.pneumoniae R6 %3D spr0521;gbkey=CDS;locus_tag=SPD_0517;product=hypothetical protein;protein_id=ABJ54876.1;transl_table=11
CP000410.2	Genbank	gene	529912	530367	.	+	.	ID=gene-SPD_0518;Name=SPD_0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0518
CP000410.2	Genbank	CDS	529912	530367	.	+	0	ID=cds-ABJ53650.1;Parent=gene-SPD_0518;Dbxref=NCBI_GP:ABJ53650.1;Name=ABJ53650.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0595%3B equivalent gene in S.pneumoniae R6 %3D spr0522;gbkey=CDS;locus_tag=SPD_0518;product=hypothetical protein;protein_id=ABJ53650.1;transl_table=11
CP000410.2	Genbank	gene	530364	530510	.	+	.	ID=gene-SPD_0519;Name=SPD_0519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0519
CP000410.2	Genbank	CDS	530364	530510	.	+	0	ID=cds-ABJ54470.1;Parent=gene-SPD_0519;Dbxref=NCBI_GP:ABJ54470.1;Name=ABJ54470.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0596;gbkey=CDS;locus_tag=SPD_0519;product=hypothetical protein;protein_id=ABJ54470.1;transl_table=11
CP000410.2	Genbank	gene	530656	530829	.	+	.	ID=gene-SPD_0520;Name=SPD_0520;Note=equivalent gene in S.pneumoniae R6 %3D spr0523%3B maturase related protein%2C degenerate%3B transposase%2C putative%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SPD_0520
CP000410.2	Genbank	gene	531181	532458	.	+	.	ID=gene-SPD_0521;Name=vex1;gbkey=Gene;gene=vex1;gene_biotype=protein_coding;locus_tag=SPD_0521
CP000410.2	Genbank	CDS	531181	532458	.	+	0	ID=cds-ABJ54140.1;Parent=gene-SPD_0521;Dbxref=NCBI_GP:ABJ54140.1;Name=ABJ54140.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0599%3B equivalent gene in S.pneumoniae R6 %3D spr0524%3B identified by match to protein family HMM PF02687;gbkey=CDS;gene=vex1;locus_tag=SPD_0521;product=ABC transporter%2C transmembrane protein Vexp1;protein_id=ABJ54140.1;transl_table=11
CP000410.2	Genbank	gene	532471	533118	.	+	.	ID=gene-SPD_0522;Name=vex2;gbkey=Gene;gene=vex2;gene_biotype=protein_coding;locus_tag=SPD_0522
CP000410.2	Genbank	CDS	532471	533118	.	+	0	ID=cds-ABJ54958.1;Parent=gene-SPD_0522;Dbxref=NCBI_GP:ABJ54958.1;Name=ABJ54958.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0600%3B equivalent gene in S.pneumoniae R6 %3D spr0525%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=vex2;locus_tag=SPD_0522;product=ABC transporter%2C ATP-binding protein Vexp2;protein_id=ABJ54958.1;transl_table=11
CP000410.2	Genbank	gene	533170	534549	.	+	.	ID=gene-SPD_0523;Name=vex3;gbkey=Gene;gene=vex3;gene_biotype=protein_coding;locus_tag=SPD_0523
CP000410.2	Genbank	CDS	533170	534549	.	+	0	ID=cds-ABJ53925.1;Parent=gene-SPD_0523;Dbxref=NCBI_GP:ABJ53925.1;Name=ABJ53925.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0601%3B equivalent gene in S.pneumoniae R6 %3D spr0526%3B identified by match to protein family HMM PF02687;gbkey=CDS;gene=vex3;locus_tag=SPD_0523;product=ABC transporter%2C transmembrane protein Vexp3;protein_id=ABJ53925.1;transl_table=11
CP000410.2	Genbank	gene	534861	535517	.	+	.	ID=gene-SPD_0524;Name=vncR;gbkey=Gene;gene=vncR;gene_biotype=protein_coding;locus_tag=SPD_0524
CP000410.2	Genbank	CDS	534861	535517	.	+	0	ID=cds-ABJ54810.1;Parent=gene-SPD_0524;Dbxref=NCBI_GP:ABJ54810.1;Name=ABJ54810.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0603%3B equivalent gene in S.pneumoniae R6 %3D spr0528%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;gene=vncR;locus_tag=SPD_0524;product=DNA-binding response regulator VncR;protein_id=ABJ54810.1;transl_table=11
CP000410.2	Genbank	gene	535514	536842	.	+	.	ID=gene-SPD_0525;Name=vncS;gbkey=Gene;gene=vncS;gene_biotype=protein_coding;locus_tag=SPD_0525
CP000410.2	Genbank	CDS	535514	536842	.	+	0	ID=cds-ABJ53639.1;Parent=gene-SPD_0525;Dbxref=NCBI_GP:ABJ53639.1;Name=ABJ53639.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0604%3B equivalent gene in S.pneumoniae R6 %3D spr0529%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;gene=vncS;locus_tag=SPD_0525;product=sensor histidine kinase VncS;protein_id=ABJ53639.1;transl_table=11
CP000410.2	Genbank	gene	536983	537864	.	+	.	ID=gene-SPD_0526;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=SPD_0526
CP000410.2	Genbank	CDS	536983	537864	.	+	0	ID=cds-ABJ54156.1;Parent=gene-SPD_0526;Dbxref=NCBI_GP:ABJ54156.1;Name=ABJ54156.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0605%3B equivalent gene in S.pneumoniae R6 %3D spr0530%3B identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859;gbkey=CDS;gene=fba;locus_tag=SPD_0526;product=fructose-1%2C6-bisphosphate aldolase%2C class II;protein_id=ABJ54156.1;transl_table=11
CP000410.2	Genbank	gene	538185	539375	.	-	.	ID=gene-SPD_0527;Name=SPD_0527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0527
CP000410.2	Genbank	CDS	538185	539375	.	-	0	ID=cds-ABJ53982.1;Parent=gene-SPD_0527;Dbxref=NCBI_GP:ABJ53982.1;Name=ABJ53982.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0606%3B equivalent gene in S.pneumoniae R6 %3D spr0531%3B identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970%3B match to protein family HMM PF01794;gbkey=CDS;locus_tag=SPD_0527;product=oxidoreductase%2C putative;protein_id=ABJ53982.1;transl_table=11
CP000410.2	Genbank	gene	539633	540292	.	-	.	ID=gene-SPD_0528;Name=SPD_0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0528
CP000410.2	Genbank	CDS	539633	540292	.	-	0	ID=cds-ABJ54615.1;Parent=gene-SPD_0528;Dbxref=NCBI_GP:ABJ54615.1;Name=ABJ54615.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0607%3B equivalent gene in S.pneumoniae R6 %3D spr0532%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_0528;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ54615.1;transl_table=11
CP000410.2	Genbank	gene	540302	540979	.	-	.	ID=gene-SPD_0529;Name=SPD_0529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0529
CP000410.2	Genbank	CDS	540302	540979	.	-	0	ID=cds-ABJ53765.1;Parent=gene-SPD_0529;Dbxref=NCBI_GP:ABJ53765.1;Name=ABJ53765.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0608%3B equivalent gene in S.pneumoniae R6 %3D spr0533%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_0529;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ53765.1;transl_table=11
CP000410.2	Genbank	gene	540992	541786	.	-	.	ID=gene-SPD_0530;Name=SPD_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0530
CP000410.2	Genbank	CDS	540992	541786	.	-	0	ID=cds-ABJ54816.1;Parent=gene-SPD_0530;Dbxref=NCBI_GP:ABJ54816.1;Name=ABJ54816.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0609%3B equivalent gene in S.pneumoniae R6 %3D spr0534%3B identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=SPD_0530;product=amino acid ABC transporter%2C amino acid-binding protein;protein_id=ABJ54816.1;transl_table=11
CP000410.2	Genbank	pseudogene	541797	542555	.	-	.	ID=gene-SPD_0531;Name=SPD_0531;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0610%3B equivalent gene in S.pneumoniae R6 %3D spr0536%3B amino acid ABC transporter%2C ATP-binding protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0531;pseudo=true
CP000410.2	Genbank	gene	542832	545054	.	+	.	ID=gene-SPD_0532;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=SPD_0532
CP000410.2	Genbank	CDS	542832	545054	.	+	0	ID=cds-ABJ55439.1;Parent=gene-SPD_0532;Dbxref=NCBI_GP:ABJ55439.1;Name=ABJ55439.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0611%3B equivalent gene in S.pneumoniae R6 %3D spr0537%3B identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644;gbkey=CDS;gene=recJ;locus_tag=SPD_0532;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=ABJ55439.1;transl_table=11
CP000410.2	Genbank	gene	545229	546890	.	+	.	ID=gene-SPD_0533;Name=SPD_0533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0533
CP000410.2	Genbank	CDS	545229	546890	.	+	0	ID=cds-ABJ54380.1;Parent=gene-SPD_0533;Dbxref=NCBI_GP:ABJ54380.1;Name=ABJ54380.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0613%3B equivalent gene in S.pneumoniae R6 %3D spr0538%3B identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521;gbkey=CDS;locus_tag=SPD_0533;product=metallo-beta-lactamase superfamily protein;protein_id=ABJ54380.1;transl_table=11
CP000410.2	Genbank	gene	546959	547738	.	+	.	ID=gene-SPD_0534;Name=estA;gbkey=Gene;gene=estA;gene_biotype=protein_coding;locus_tag=SPD_0534
CP000410.2	Genbank	CDS	546959	547738	.	+	0	ID=cds-ABJ54736.1;Parent=gene-SPD_0534;Dbxref=NCBI_GP:ABJ54736.1;Name=ABJ54736.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0614%3B equivalent gene in S.pneumoniae R6 %3D spr0539%3B identified by match to protein family HMM PF00756;gbkey=CDS;gene=estA;locus_tag=SPD_0534;product=tributyrin esterase;protein_id=ABJ54736.1;transl_table=11
CP000410.2	Genbank	gene	547850	549070	.	+	.	ID=gene-SPD_0535;Name=murM/fibA;gbkey=Gene;gene=murM/fibA;gene_biotype=protein_coding;locus_tag=SPD_0535
CP000410.2	Genbank	CDS	547850	549070	.	+	0	ID=cds-ABJ53614.1;Parent=gene-SPD_0535;Dbxref=NCBI_GP:ABJ53614.1;Name=ABJ53614.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0615%3B equivalent gene in S.pneumoniae R6 %3D spr0540%3B identified by match to protein family HMM PF02388;gbkey=CDS;gene=murM/fibA;locus_tag=SPD_0535;product=serine/alanine-adding enzyme MurM;protein_id=ABJ53614.1;transl_table=11
CP000410.2	Genbank	gene	549075	550307	.	+	.	ID=gene-SPD_0536;Name=fibB;gbkey=Gene;gene=fibB;gene_biotype=protein_coding;locus_tag=SPD_0536
CP000410.2	Genbank	CDS	549075	550307	.	+	0	ID=cds-ABJ53607.1;Parent=gene-SPD_0536;Dbxref=NCBI_GP:ABJ53607.1;Name=ABJ53607.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0616%3B equivalent gene in S.pneumoniae R6 %3D spr0541%3B identified by match to protein family HMM PF02388;gbkey=CDS;gene=fibB;locus_tag=SPD_0536;product=beta-lactam resistance factor;protein_id=ABJ53607.1;transl_table=11
CP000410.2	Genbank	gene	550423	551082	.	+	.	ID=gene-SPD_0537;Name=SPD_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0537
CP000410.2	Genbank	CDS	550423	551082	.	+	0	ID=cds-ABJ54651.1;Parent=gene-SPD_0537;Dbxref=NCBI_GP:ABJ54651.1;Name=ABJ54651.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0617%3B equivalent gene in S.pneumoniae R6 %3D spr0542%3B identified by match to protein family HMM PF00413;gbkey=CDS;locus_tag=SPD_0537;product=matrixin family protein;protein_id=ABJ54651.1;transl_table=11
CP000410.2	Genbank	gene	551122	552966	.	+	.	ID=gene-SPD_0538;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SPD_0538
CP000410.2	Genbank	CDS	551122	552966	.	+	0	ID=cds-ABJ53727.1;Parent=gene-SPD_0538;Dbxref=NCBI_GP:ABJ53727.1;Name=ABJ53727.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0618%3B equivalent gene in S.pneumoniae R6 %3D spr0543%3B identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM TIGR00194;gbkey=CDS;gene=uvrC;locus_tag=SPD_0538;product=excinuclease ABC%2C C subunit;protein_id=ABJ53727.1;transl_table=11
CP000410.2	Genbank	gene	552956	553789	.	+	.	ID=gene-SPD_0539;Name=SPD_0539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0539
CP000410.2	Genbank	CDS	552956	553789	.	+	0	ID=cds-ABJ54364.1;Parent=gene-SPD_0539;Dbxref=NCBI_GP:ABJ54364.1;Name=ABJ54364.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0619%3B equivalent gene in S.pneumoniae R6 %3D spr0544%3B identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=SPD_0539;product=Ser/Thr protein phosphatase family protein;protein_id=ABJ54364.1;transl_table=11
CP000410.2	Genbank	gene	553971	554771	.	-	.	ID=gene-SPD_0540;Name=SPD_0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0540
CP000410.2	Genbank	CDS	553971	554771	.	-	0	ID=cds-ABJ55427.1;Parent=gene-SPD_0540;Dbxref=NCBI_GP:ABJ55427.1;Name=ABJ55427.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0620%3B equivalent gene in S.pneumoniae R6 %3D spr0545%3B identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=SPD_0540;product=amino acid ABC transporter%2C amino acid-binding protein%2C putative;protein_id=ABJ55427.1;transl_table=11
CP000410.2	Genbank	gene	554942	555547	.	+	.	ID=gene-SPD_0541;Name=SPD_0541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0541
CP000410.2	Genbank	CDS	554942	555547	.	+	0	ID=cds-ABJ55229.1;Parent=gene-SPD_0541;Dbxref=NCBI_GP:ABJ55229.1;Name=ABJ55229.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0622%3B equivalent gene in S.pneumoniae R6 %3D spr0546%3B identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=SPD_0541;product=nitroreductase family protein;protein_id=ABJ55229.1;transl_table=11
CP000410.2	Genbank	gene	555560	556960	.	+	.	ID=gene-SPD_0542;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=SPD_0542
CP000410.2	Genbank	CDS	555560	556960	.	+	0	ID=cds-ABJ54077.1;Parent=gene-SPD_0542;Dbxref=NCBI_GP:ABJ54077.1;Name=ABJ54077.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0623%3B equivalent gene in S.pneumoniae R6 %3D spr0547%3B identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01886%3B match to protein family HMM TIGR01887;gbkey=CDS;gene=pepV;locus_tag=SPD_0542;product=dipeptidase PepV;protein_id=ABJ54077.1;transl_table=11
CP000410.2	Genbank	gene	557014	557592	.	+	.	ID=gene-SPD_0543;Name=SPD_0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0543
CP000410.2	Genbank	CDS	557014	557592	.	+	0	ID=cds-ABJ55321.1;Parent=gene-SPD_0543;Dbxref=NCBI_GP:ABJ55321.1;Name=ABJ55321.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0624%3B equivalent gene in S.pneumoniae R6 %3D spr0548%3B identified by match to protein family HMM PF03167;gbkey=CDS;locus_tag=SPD_0543;product=hypothetical protein;protein_id=ABJ55321.1;transl_table=11
CP000410.2	Genbank	gene	557756	557908	.	+	.	ID=gene-SPD_0544;Name=SPD_0544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0544
CP000410.2	Genbank	CDS	557756	557908	.	+	0	ID=cds-ABJ54251.1;Parent=gene-SPD_0544;Dbxref=NCBI_GP:ABJ54251.1;Name=ABJ54251.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0549;gbkey=CDS;locus_tag=SPD_0544;product=hypothetical protein;protein_id=ABJ54251.1;transl_table=11
CP000410.2	Genbank	gene	557909	558043	.	+	.	ID=gene-SPD_0545;Name=SPD_0545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0545
CP000410.2	Genbank	CDS	557909	558043	.	+	0	ID=cds-ABJ53804.1;Parent=gene-SPD_0545;Dbxref=NCBI_GP:ABJ53804.1;Name=ABJ53804.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0550;gbkey=CDS;locus_tag=SPD_0545;product=hypothetical protein;protein_id=ABJ53804.1;transl_table=11
CP000410.2	Genbank	gene	558214	559539	.	+	.	ID=gene-SPD_0546;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=SPD_0546
CP000410.2	Genbank	CDS	558214	559539	.	+	0	ID=cds-ABJ55151.1;Parent=gene-SPD_0546;Dbxref=NCBI_GP:ABJ55151.1;Name=ABJ55151.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0626%3B equivalent gene in S.pneumoniae R6 %3D spr0551%3B identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ;locus_tag=SPD_0546;product=branched-chain amino acid transport system II carrier protein;protein_id=ABJ55151.1;transl_table=11
CP000410.2	Genbank	gene	559743	560780	.	+	.	ID=gene-SPD_0547;Name=SPD_0547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0547
CP000410.2	Genbank	CDS	559743	560780	.	+	0	ID=cds-ABJ54689.1;Parent=gene-SPD_0547;Dbxref=NCBI_GP:ABJ54689.1;Name=ABJ54689.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0627%3B equivalent gene in S.pneumoniae R6 %3D spr0552%3B identified by match to protein family HMM PF05343;gbkey=CDS;locus_tag=SPD_0547;product=hypothetical protein;protein_id=ABJ54689.1;transl_table=11
CP000410.2	Genbank	gene	560749	561252	.	+	.	ID=gene-SPD_0548;Name=SPD_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0548
CP000410.2	Genbank	CDS	560749	561252	.	+	0	ID=cds-ABJ53853.1;Parent=gene-SPD_0548;Dbxref=NCBI_GP:ABJ53853.1;Name=ABJ53853.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0628%3B equivalent gene in S.pneumoniae R6 %3D spr0553%3B identified by match to protein family HMM PF01230;gbkey=CDS;locus_tag=SPD_0548;product=HIT family protein;protein_id=ABJ53853.1;transl_table=11
CP000410.2	Genbank	gene	561255	561971	.	+	.	ID=gene-SPD_0549;Name=SPD_0549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0549
CP000410.2	Genbank	CDS	561255	561971	.	+	0	ID=cds-ABJ54866.1;Parent=gene-SPD_0549;Dbxref=NCBI_GP:ABJ54866.1;Name=ABJ54866.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0629%3B equivalent gene in S.pneumoniae R6 %3D spr0554%3B identified by match to protein family HMM PF02557;gbkey=CDS;locus_tag=SPD_0549;product=lipoprotein%2C putative;protein_id=ABJ54866.1;transl_table=11
CP000410.2	Genbank	gene	562280	562705	.	+	.	ID=gene-SPD_0550;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=SPD_0550
CP000410.2	Genbank	CDS	562280	562705	.	+	0	ID=cds-ABJ54012.1;Parent=gene-SPD_0550;Dbxref=NCBI_GP:ABJ54012.1;Name=ABJ54012.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0630%3B equivalent gene in S.pneumoniae R6 %3D spr0555%3B identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632;gbkey=CDS;gene=rplK;locus_tag=SPD_0550;product=ribosomal protein L11;protein_id=ABJ54012.1;transl_table=11
CP000410.2	Genbank	gene	562913	563602	.	+	.	ID=gene-SPD_0551;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=SPD_0551
CP000410.2	Genbank	CDS	562913	563602	.	+	0	ID=cds-ABJ54000.1;Parent=gene-SPD_0551;Dbxref=NCBI_GP:ABJ54000.1;Name=ABJ54000.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0631%3B equivalent gene in S.pneumoniae R6 %3D spr0556%3B identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169;gbkey=CDS;gene=rplA;locus_tag=SPD_0551;product=ribosomal protein L1;protein_id=ABJ54000.1;transl_table=11
CP000410.2	Genbank	gene	564194	564781	.	-	.	ID=gene-SPD_0552;Name=SPD_0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0552
CP000410.2	Genbank	CDS	564194	564781	.	-	0	ID=cds-ABJ54132.1;Parent=gene-SPD_0552;Dbxref=NCBI_GP:ABJ54132.1;Name=ABJ54132.1;gbkey=CDS;locus_tag=SPD_0552;product=hypothetical protein;protein_id=ABJ54132.1;transl_table=11
CP000410.2	Genbank	gene	564747	565076	.	+	.	ID=gene-SPD_0553;Name=SPD_0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0553
CP000410.2	Genbank	CDS	564747	565076	.	+	0	ID=cds-ABJ55290.1;Parent=gene-SPD_0553;Dbxref=NCBI_GP:ABJ55290.1;Name=ABJ55290.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0633;gbkey=CDS;locus_tag=SPD_0553;product=hypothetical protein;protein_id=ABJ55290.1;transl_table=11
CP000410.2	Genbank	gene	566120	567112	.	+	.	ID=gene-SPD_0554;Name=SPD_0554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0554
CP000410.2	Genbank	CDS	566120	567112	.	+	0	ID=cds-ABJ54333.1;Parent=gene-SPD_0554;Dbxref=NCBI_GP:ABJ54333.1;Name=ABJ54333.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0636%3B equivalent gene in S.pneumoniae R6 %3D spr0557%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0554;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54333.1;transl_table=11
CP000410.2	Genbank	gene	567114	567932	.	+	.	ID=gene-SPD_0555;Name=SPD_0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0555
CP000410.2	Genbank	CDS	567114	567932	.	+	0	ID=cds-ABJ54560.1;Parent=gene-SPD_0555;Dbxref=NCBI_GP:ABJ54560.1;Name=ABJ54560.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0637%3B equivalent gene in S.pneumoniae R6 %3D spr0558%3B identified by match to protein family HMM PF06182;gbkey=CDS;locus_tag=SPD_0555;product=membrane protein%2C putative;protein_id=ABJ54560.1;transl_table=11
CP000410.2	Genbank	gene	567934	568719	.	+	.	ID=gene-SPD_0556;Name=SPD_0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0556
CP000410.2	Genbank	CDS	567934	568719	.	+	0	ID=cds-ABJ55202.1;Parent=gene-SPD_0556;Dbxref=NCBI_GP:ABJ55202.1;Name=ABJ55202.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0638%3B equivalent gene in S.pneumoniae R6 %3D spr0559%3B identified by match to protein family HMM PF06182;gbkey=CDS;locus_tag=SPD_0556;product=membrane protein%2C putative;protein_id=ABJ55202.1;transl_table=11
CP000410.2	Genbank	pseudogene	568783	569217	.	+	.	ID=gene-SPD_0557;Name=SPD_0557;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0639. In R6 and D39 this gene is frameshifted relative to orthologs%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0557;pseudo=true
CP000410.2	Genbank	gene	569949	576383	.	+	.	ID=gene-SPD_0558;Name=prtA;gbkey=Gene;gene=prtA;gene_biotype=protein_coding;locus_tag=SPD_0558
CP000410.2	Genbank	CDS	569949	576383	.	+	0	ID=cds-ABJ55268.1;Parent=gene-SPD_0558;Dbxref=NCBI_GP:ABJ55268.1;Name=ABJ55268.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0641%3B equivalent gene in S.pneumoniae R6 %3D spr0561%3B identified by match to protein family HMM PF00082%3B match to protein family HMM PF00746%3B match to protein family HMM PF02225%3B match to protein family HMM PF06280%3B match to protein family HMM TIGR01167;gbkey=CDS;gene=prtA;locus_tag=SPD_0558;product=cell wall-associated serine protease PrtA;protein_id=ABJ55268.1;transl_table=11
CP000410.2	Genbank	gene	577008	577484	.	+	.	ID=gene-SPD_0559;Name=SPD_0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0559
CP000410.2	Genbank	CDS	577008	577484	.	+	0	ID=cds-ABJ54441.1;Parent=gene-SPD_0559;Dbxref=NCBI_GP:ABJ54441.1;Name=ABJ54441.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0645%3B equivalent gene in S.pneumoniae R6 %3D spr0562%3B identified by match to protein family HMM PF00359;gbkey=CDS;locus_tag=SPD_0559;product=PTS system IIA component%2C putative;protein_id=ABJ54441.1;transl_table=11
CP000410.2	Genbank	gene	577522	577827	.	+	.	ID=gene-SPD_0560;Name=SPD_0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0560
CP000410.2	Genbank	CDS	577522	577827	.	+	0	ID=cds-ABJ54444.1;Parent=gene-SPD_0560;Dbxref=NCBI_GP:ABJ54444.1;Name=ABJ54444.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0646%3B equivalent gene in S.pneumoniae R6 %3D spr0563;gbkey=CDS;locus_tag=SPD_0560;product=PTS system%2C IIB component%2C putative;protein_id=ABJ54444.1;transl_table=11
CP000410.2	Genbank	gene	577875	579350	.	+	.	ID=gene-SPD_0561;Name=SPD_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0561
CP000410.2	Genbank	CDS	577875	579350	.	+	0	ID=cds-ABJ55480.1;Parent=gene-SPD_0561;Dbxref=NCBI_GP:ABJ55480.1;Name=ABJ55480.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0647%3B equivalent gene in S.pneumoniae R6 %3D spr0564%3B identified by match to protein family HMM PF03611;gbkey=CDS;locus_tag=SPD_0561;product=PTS system%2C IIC component%2C putative;protein_id=ABJ55480.1;transl_table=11
CP000410.2	Genbank	gene	579655	586341	.	+	.	ID=gene-SPD_0562;Name=bgaA;gbkey=Gene;gene=bgaA;gene_biotype=protein_coding;locus_tag=SPD_0562
CP000410.2	Genbank	CDS	579655	586341	.	+	0	ID=cds-ABJ53768.1;Parent=gene-SPD_0562;Dbxref=NCBI_GP:ABJ53768.1;Name=ABJ53768.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0648%3B equivalent gene in S.pneumoniae R6 %3D spr0565%3B identified by match to protein family HMM PF00703%3B match to protein family HMM PF00746%3B match to protein family HMM PF02836%3B match to protein family HMM PF02837%3B match to protein family HMM PF04650%3B match to protein family HMM PF07501%3B match to protein family HMM PF07532%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168;gbkey=CDS;gene=bgaA;locus_tag=SPD_0562;product=beta-galactosidase precursor%2C putative;protein_id=ABJ53768.1;transl_table=11
CP000410.2	Genbank	pseudogene	586723	587443	.	-	.	ID=gene-SPD_0563;Name=SPD_0563;Note=equivalent gene in S.pneumoniae R6 %3D spr0567. The R6 gene is similarly degenerate to orthologs%3B transposase putative%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0563;pseudo=true
CP000410.2	Genbank	gene	587655	588008	.	-	.	ID=gene-SPD_0564;Name=SPD_0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0564
CP000410.2	Genbank	CDS	587655	588008	.	-	0	ID=cds-ABJ54613.1;Parent=gene-SPD_0564;Dbxref=NCBI_GP:ABJ54613.1;Name=ABJ54613.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0650%3B equivalent gene in S.pneumoniae R6 %3D spr0568;gbkey=CDS;locus_tag=SPD_0564;product=hypothetical protein;protein_id=ABJ54613.1;transl_table=11
CP000410.2	Genbank	gene	588106	588558	.	+	.	ID=gene-SPD_0565;Name=SPD_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0565
CP000410.2	Genbank	CDS	588106	588558	.	+	0	ID=cds-ABJ53816.1;Parent=gene-SPD_0565;Dbxref=NCBI_GP:ABJ53816.1;Name=ABJ53816.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0569;gbkey=CDS;locus_tag=SPD_0565;product=hypothetical protein;protein_id=ABJ53816.1;transl_table=11
CP000410.2	Genbank	gene	588616	589062	.	+	.	ID=gene-SPD_0566;Name=SPD_0566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0566
CP000410.2	Genbank	CDS	588616	589062	.	+	0	ID=cds-ABJ55345.1;Parent=gene-SPD_0566;Dbxref=NCBI_GP:ABJ55345.1;Name=ABJ55345.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0570;gbkey=CDS;locus_tag=SPD_0566;product=hypothetical protein;protein_id=ABJ55345.1;transl_table=11
CP000410.2	Genbank	gene	589040	589603	.	+	.	ID=gene-SPD_0567;Name=SPD_0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0567
CP000410.2	Genbank	CDS	589040	589603	.	+	0	ID=cds-ABJ54548.1;Parent=gene-SPD_0567;Dbxref=NCBI_GP:ABJ54548.1;Name=ABJ54548.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0652%3B equivalent gene in S.pneumoniae R6 %3D spr0571%3B identified by match to protein family HMM PF06962;gbkey=CDS;locus_tag=SPD_0567;product=rRNA methylase%2C putative;protein_id=ABJ54548.1;transl_table=11
CP000410.2	Genbank	gene	589596	589850	.	+	.	ID=gene-SPD_0568;Name=SPD_0568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0568
CP000410.2	Genbank	CDS	589596	589850	.	+	0	ID=cds-ABJ54565.1;Parent=gene-SPD_0568;Dbxref=NCBI_GP:ABJ54565.1;Name=ABJ54565.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0653%3B equivalent gene in S.pneumoniae R6 %3D spr0572;gbkey=CDS;locus_tag=SPD_0568;product=hypothetical protein;protein_id=ABJ54565.1;transl_table=11
CP000410.2	Genbank	gene	589862	591916	.	+	.	ID=gene-SPD_0569;Name=SPD_0569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0569
CP000410.2	Genbank	CDS	589862	591916	.	+	0	ID=cds-ABJ55132.1;Parent=gene-SPD_0569;Dbxref=NCBI_GP:ABJ55132.1;Name=ABJ55132.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0655%3B equivalent gene in S.pneumoniae R6 %3D spr0573%3B identified by match to protein family HMM PF00999;gbkey=CDS;locus_tag=SPD_0569;product=sodium/hydrogen exchanger family protein;protein_id=ABJ55132.1;transl_table=11
CP000410.2	Genbank	gene	592095	592955	.	+	.	ID=gene-SPD_0570;Name=SPD_0570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0570
CP000410.2	Genbank	CDS	592095	592955	.	+	0	ID=cds-ABJ54859.1;Parent=gene-SPD_0570;Dbxref=NCBI_GP:ABJ54859.1;Name=ABJ54859.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0657%3B equivalent gene in S.pneumoniae R6 %3D spr0574%3B identified by match to protein family HMM PF03631;gbkey=CDS;locus_tag=SPD_0570;product=ribonuclease BN%2C putative;protein_id=ABJ54859.1;transl_table=11
CP000410.2	Genbank	gene	593166	593876	.	+	.	ID=gene-SPD_0571;Name=ccdA-1;gbkey=Gene;gene=ccdA-1;gene_biotype=protein_coding;locus_tag=SPD_0571
CP000410.2	Genbank	CDS	593166	593876	.	+	0	ID=cds-ABJ54003.1;Parent=gene-SPD_0571;Dbxref=NCBI_GP:ABJ54003.1;Name=ABJ54003.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0658%3B equivalent gene in S.pneumoniae R6 %3D spr0575%3B identified by match to protein family HMM PF02683;gbkey=CDS;gene=ccdA-1;locus_tag=SPD_0571;product=cytochrome c-type biogenesis protein CcdA;protein_id=ABJ54003.1;transl_table=11
CP000410.2	Genbank	gene	593896	594462	.	+	.	ID=gene-SPD_0572;Name=SPD_0572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0572
CP000410.2	Genbank	CDS	593896	594462	.	+	0	ID=cds-ABJ55360.1;Parent=gene-SPD_0572;Dbxref=NCBI_GP:ABJ55360.1;Name=ABJ55360.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0659%3B equivalent gene in S.pneumoniae R6 %3D spr0576;gbkey=CDS;locus_tag=SPD_0572;product=thioredoxin family protein;protein_id=ABJ55360.1;transl_table=11
CP000410.2	Genbank	gene	594650	595585	.	+	.	ID=gene-SPD_0573;Name=msrAB2;gbkey=Gene;gene=msrAB2;gene_biotype=protein_coding;locus_tag=SPD_0573
CP000410.2	Genbank	CDS	594650	595585	.	+	0	ID=cds-ABJ53896.1;Parent=gene-SPD_0573;Dbxref=NCBI_GP:ABJ53896.1;Name=ABJ53896.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0660%3B equivalent gene in S.pneumoniae R6 %3D spr0577%3B identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401;gbkey=CDS;gene=msrAB2;locus_tag=SPD_0573;product=peptide methionine sulfoxide reductase msrA/msrB 2;protein_id=ABJ53896.1;transl_table=11
CP000410.2	Genbank	gene	595853	596590	.	+	.	ID=gene-SPD_0574;Name=SPD_0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0574
CP000410.2	Genbank	CDS	595853	596590	.	+	0	ID=cds-ABJ54686.1;Parent=gene-SPD_0574;Dbxref=NCBI_GP:ABJ54686.1;Name=ABJ54686.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0661%3B equivalent gene in S.pneumoniae R6 %3D spr0578%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00165;gbkey=CDS;locus_tag=SPD_0574;product=DNA-binding response regulator;protein_id=ABJ54686.1;transl_table=11
CP000410.2	Genbank	gene	596587	598278	.	+	.	ID=gene-SPD_0575;Name=SPD_0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0575
CP000410.2	Genbank	CDS	596587	598278	.	+	0	ID=cds-ABJ53762.1;Parent=gene-SPD_0575;Dbxref=NCBI_GP:ABJ53762.1;Name=ABJ53762.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0662%3B equivalent gene in S.pneumoniae R6 %3D spr0579%3B identified by match to protein family HMM PF00672%3B match to protein family HMM PF02518%3B match to protein family HMM PF02743%3B match to protein family HMM PF06580;gbkey=CDS;locus_tag=SPD_0575;product=sensor histidine kinase%2C putative;protein_id=ABJ53762.1;transl_table=11
CP000410.2	Genbank	gene	598394	598957	.	+	.	ID=gene-SPD_0576;Name=SPD_0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0576
CP000410.2	Genbank	CDS	598394	598957	.	+	0	ID=cds-ABJ54923.1;Parent=gene-SPD_0576;Dbxref=NCBI_GP:ABJ54923.1;Name=ABJ54923.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0663%3B equivalent gene in S.pneumoniae R6 %3D spr0580%3B identified by match to protein family HMM PF04260%3B match to protein family HMM TIGR01440;gbkey=CDS;locus_tag=SPD_0576;product=conserved hypothetical protein TIGR01440;protein_id=ABJ54923.1;transl_table=11
CP000410.2	Genbank	gene	598979	604609	.	+	.	ID=gene-SPD_0577;Name=zmpB;gbkey=Gene;gene=zmpB;gene_biotype=protein_coding;locus_tag=SPD_0577
CP000410.2	Genbank	CDS	598979	604609	.	+	0	ID=cds-ABJ54076.1;Parent=gene-SPD_0577;Dbxref=NCBI_GP:ABJ54076.1;Name=ABJ54076.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0581%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF05342%3B match to protein family HMM PF07501%3B match to protein family HMM PF07580%3B match to protein family HMM TIGR01167;gbkey=CDS;gene=zmpB;locus_tag=SPD_0577;product=zinc metalloprotease ZmpB;protein_id=ABJ54076.1;transl_table=11
CP000410.2	Genbank	gene	604679	606400	.	+	.	ID=gene-SPD_0578;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=SPD_0578
CP000410.2	Genbank	CDS	604679	606400	.	+	0	ID=cds-ABJ55099.1;Parent=gene-SPD_0578;Dbxref=NCBI_GP:ABJ55099.1;Name=ABJ55099.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0665%3B equivalent gene in S.pneumoniae R6 %3D spr0582%3B identified by match to protein family HMM PF00425%3B match to protein family HMM TIGR00553;gbkey=CDS;gene=pabB;locus_tag=SPD_0578;product=para-aminobenzoate synthase%2C component I;protein_id=ABJ55099.1;transl_table=11
CP000410.2	Genbank	gene	606558	607547	.	+	.	ID=gene-SPD_0579;Name=SPD_0579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0579
CP000410.2	Genbank	CDS	606558	607547	.	+	0	ID=cds-ABJ54922.1;Parent=gene-SPD_0579;Dbxref=NCBI_GP:ABJ54922.1;Name=ABJ54922.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0667%3B equivalent gene in S.pneumoniae R6 %3D spr0583%3B identified by match to protein family HMM PF01473%3B match to protein family HMM PF05901%3B match to protein family HMM PF07553;gbkey=CDS;locus_tag=SPD_0579;product=pneumococcal surface protein%2C putative;protein_id=ABJ54922.1;transl_table=11
CP000410.2	Genbank	gene	607683	608642	.	+	.	ID=gene-SPD_0580;Name=gki;gbkey=Gene;gene=gki;gene_biotype=protein_coding;locus_tag=SPD_0580
CP000410.2	Genbank	CDS	607683	608642	.	+	0	ID=cds-ABJ55324.1;Parent=gene-SPD_0580;Dbxref=NCBI_GP:ABJ55324.1;Name=ABJ55324.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0668%3B equivalent gene in S.pneumoniae R6 %3D spr0584%3B identified by match to protein family HMM PF00480%3B match to protein family HMM TIGR00744;gbkey=CDS;gene=gki;locus_tag=SPD_0580;product=glucokinase;protein_id=ABJ55324.1;transl_table=11
CP000410.2	Genbank	gene	608739	609578	.	+	.	ID=gene-SPD_0581;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=SPD_0581
CP000410.2	Genbank	CDS	608739	609578	.	+	0	ID=cds-ABJ54489.1;Parent=gene-SPD_0581;Dbxref=NCBI_GP:ABJ54489.1;Name=ABJ54489.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0669%3B equivalent gene in S.pneumoniae R6 %3D spr0585%3B identified by match to protein family HMM PF00303;gbkey=CDS;gene=thyA;locus_tag=SPD_0581;product=thymidylate synthase;protein_id=ABJ54489.1;transl_table=11
CP000410.2	Genbank	gene	609626	609796	.	-	.	ID=gene-SPD_0582;Name=SPD_0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0582
CP000410.2	Genbank	CDS	609626	609796	.	-	0	ID=cds-ABJ54354.1;Parent=gene-SPD_0582;Dbxref=NCBI_GP:ABJ54354.1;Name=ABJ54354.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0670%3B equivalent gene in S.pneumoniae R6 %3D spr0586;gbkey=CDS;locus_tag=SPD_0582;product=hypothetical protein;protein_id=ABJ54354.1;transl_table=11
CP000410.2	Genbank	gene	609917	610801	.	+	.	ID=gene-SPD_0583;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SPD_0583
CP000410.2	Genbank	CDS	609917	610801	.	+	0	ID=cds-ABJ53649.1;Parent=gene-SPD_0583;Dbxref=NCBI_GP:ABJ53649.1;Name=ABJ53649.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0671%3B equivalent gene in S.pneumoniae R6 %3D spr0588%3B identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174;gbkey=CDS;gene=miaA;locus_tag=SPD_0583;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=ABJ53649.1;transl_table=11
CP000410.2	Genbank	gene	610794	612032	.	+	.	ID=gene-SPD_0584;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=SPD_0584
CP000410.2	Genbank	CDS	610794	612032	.	+	0	ID=cds-ABJ55372.1;Parent=gene-SPD_0584;Dbxref=NCBI_GP:ABJ55372.1;Name=ABJ55372.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0672%3B equivalent gene in S.pneumoniae R6 %3D spr0589%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231;gbkey=CDS;gene=hflX;locus_tag=SPD_0584;product=GTP-binding protein HflX;protein_id=ABJ55372.1;transl_table=11
CP000410.2	Genbank	gene	612025	612648	.	+	.	ID=gene-SPD_0585;Name=SPD_0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0585
CP000410.2	Genbank	CDS	612025	612648	.	+	0	ID=cds-ABJ55150.1;Parent=gene-SPD_0585;Dbxref=NCBI_GP:ABJ55150.1;Name=ABJ55150.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0673%3B equivalent gene in S.pneumoniae R6 %3D spr0590;gbkey=CDS;locus_tag=SPD_0585;product=hypothetical protein;protein_id=ABJ55150.1;transl_table=11
CP000410.2	Genbank	gene	612663	613592	.	+	.	ID=gene-SPD_0586;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=SPD_0586
CP000410.2	Genbank	CDS	612663	613592	.	+	0	ID=cds-ABJ54995.1;Parent=gene-SPD_0586;Dbxref=NCBI_GP:ABJ54995.1;Name=ABJ54995.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0674%3B equivalent gene in S.pneumoniae R6 %3D spr0591%3B identified by match to protein family HMM PF00753%3B match to protein family HMM TIGR02651;gbkey=CDS;gene=rnz;locus_tag=SPD_0586;product=ribonuclease Z;protein_id=ABJ54995.1;transl_table=11
CP000410.2	Genbank	gene	613613	614368	.	+	.	ID=gene-SPD_0587;Name=SPD_0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0587
CP000410.2	Genbank	CDS	613613	614368	.	+	0	ID=cds-ABJ54276.1;Parent=gene-SPD_0587;Dbxref=NCBI_GP:ABJ54276.1;Name=ABJ54276.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0675%3B equivalent gene in S.pneumoniae R6 %3D spr0592%3B identified by match to protein family HMM PF00106;gbkey=CDS;locus_tag=SPD_0587;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=ABJ54276.1;transl_table=11
CP000410.2	Genbank	gene	614422	615390	.	-	.	ID=gene-SPD_0588;Name=SPD_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0588
CP000410.2	Genbank	CDS	614422	615390	.	-	0	ID=cds-ABJ55392.1;Parent=gene-SPD_0588;Dbxref=NCBI_GP:ABJ55392.1;Name=ABJ55392.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0676%3B equivalent gene in S.pneumoniae R6 %3D spr0593%3B identified by match to protein family HMM PF00126;gbkey=CDS;locus_tag=SPD_0588;product=transcriptional regulator%2C putative;protein_id=ABJ55392.1;transl_table=11
CP000410.2	Genbank	gene	615394	615663	.	+	.	ID=gene-SPD_0589;Name=SPD_0589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0589
CP000410.2	Genbank	CDS	615394	615663	.	+	0	ID=cds-ABJ54722.1;Parent=gene-SPD_0589;Dbxref=NCBI_GP:ABJ54722.1;Name=ABJ54722.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0677%3B equivalent gene in S.pneumoniae R6 %3D spr0594%3B identified by match to protein family HMM PF06014;gbkey=CDS;locus_tag=SPD_0589;product=hypothetical protein;protein_id=ABJ54722.1;transl_table=11
CP000410.2	Genbank	gene	615663	616043	.	+	.	ID=gene-SPD_0590;Name=SPD_0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0590
CP000410.2	Genbank	CDS	615663	616043	.	+	0	ID=cds-ABJ53823.1;Parent=gene-SPD_0590;Dbxref=NCBI_GP:ABJ53823.1;Name=ABJ53823.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0678%3B equivalent gene in S.pneumoniae R6 %3D spr0595%3B identified by match to protein family HMM PF00581;gbkey=CDS;locus_tag=SPD_0590;product=rhodanese-like domain;protein_id=ABJ53823.1;transl_table=11
CP000410.2	Genbank	gene	616162	616359	.	+	.	ID=gene-SPD_0591;Name=SPD_0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0591
CP000410.2	Genbank	CDS	616162	616359	.	+	0	ID=cds-ABJ55347.1;Parent=gene-SPD_0591;Dbxref=NCBI_GP:ABJ55347.1;Name=ABJ55347.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0679%3B equivalent gene in S.pneumoniae R6 %3D spr0596;gbkey=CDS;locus_tag=SPD_0591;product=hypothetical protein;protein_id=ABJ55347.1;transl_table=11
CP000410.2	Genbank	gene	616399	617124	.	-	.	ID=gene-SPD_0592;Name=rsuA-2;gbkey=Gene;gene=rsuA-2;gene_biotype=protein_coding;locus_tag=SPD_0592
CP000410.2	Genbank	CDS	616399	617124	.	-	0	ID=cds-ABJ54522.1;Parent=gene-SPD_0592;Dbxref=NCBI_GP:ABJ54522.1;Name=ABJ54522.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0680%3B equivalent gene in S.pneumoniae R6 %3D spr0597%3B identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;gene=rsuA-2;locus_tag=SPD_0592;product=ribosomal small subunit pseudouridine synthase A;protein_id=ABJ54522.1;transl_table=11
CP000410.2	Genbank	gene	617286	619127	.	+	.	ID=gene-SPD_0593;Name=SPD_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0593
CP000410.2	Genbank	CDS	617286	619127	.	+	0	ID=cds-ABJ54863.1;Parent=gene-SPD_0593;Dbxref=NCBI_GP:ABJ54863.1;Name=ABJ54863.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0681%3B equivalent gene in S.pneumoniae R6 %3D spr0598%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394;gbkey=CDS;locus_tag=SPD_0593;product=elongation factor Tu family protein;protein_id=ABJ54863.1;transl_table=11
CP000410.2	Genbank	gene	619147	619401	.	+	.	ID=gene-SPD_0594;Name=SPD_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0594
CP000410.2	Genbank	CDS	619147	619401	.	+	0	ID=cds-ABJ53771.1;Parent=gene-SPD_0594;Dbxref=NCBI_GP:ABJ53771.1;Name=ABJ53771.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0682%3B equivalent gene in S.pneumoniae R6 %3D spr0599;gbkey=CDS;locus_tag=SPD_0594;product=hypothetical protein;protein_id=ABJ53771.1;transl_table=11
CP000410.2	Genbank	gene	619717	620064	.	+	.	ID=gene-SPD_0595;Name=SPD_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0595
CP000410.2	Genbank	CDS	619717	620064	.	+	0	ID=cds-ABJ54602.1;Parent=gene-SPD_0595;Dbxref=NCBI_GP:ABJ54602.1;Name=ABJ54602.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0600%3B identified by match to protein family HMM TIGR01653;gbkey=CDS;locus_tag=SPD_0595;product=hypothetical protein;protein_id=ABJ54602.1;transl_table=11
CP000410.2	Genbank	gene	620135	622156	.	+	.	ID=gene-SPD_0596;Name=SPD_0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0596
CP000410.2	Genbank	CDS	620135	622156	.	+	0	ID=cds-ABJ53726.1;Parent=gene-SPD_0596;Dbxref=NCBI_GP:ABJ53726.1;Name=ABJ53726.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0686%3B equivalent gene in S.pneumoniae R6 %3D spr0601%3B identified by match to protein family HMM PF07242%3B match to protein family HMM TIGR01654;gbkey=CDS;locus_tag=SPD_0596;product=membrane protein%2C putative;protein_id=ABJ53726.1;transl_table=11
CP000410.2	Genbank	gene	622158	622799	.	+	.	ID=gene-SPD_0597;Name=SPD_0597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0597
CP000410.2	Genbank	CDS	622158	622799	.	+	0	ID=cds-ABJ54834.1;Parent=gene-SPD_0597;Dbxref=NCBI_GP:ABJ54834.1;Name=ABJ54834.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0687%3B equivalent gene in S.pneumoniae R6 %3D spr0602%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0597;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54834.1;transl_table=11
CP000410.2	Genbank	gene	622903	624255	.	+	.	ID=gene-SPD_0598;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SPD_0598
CP000410.2	Genbank	CDS	622903	624255	.	+	0	ID=cds-ABJ54058.1;Parent=gene-SPD_0598;Dbxref=NCBI_GP:ABJ54058.1;Name=ABJ54058.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0688%3B equivalent gene in S.pneumoniae R6 %3D spr0603%3B identified by match to protein family HMM PF02875%3B match to protein family HMM TIGR01087;gbkey=CDS;gene=murD;locus_tag=SPD_0598;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=ABJ54058.1;transl_table=11
CP000410.2	Genbank	gene	624259	625317	.	+	.	ID=gene-SPD_0599;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SPD_0599
CP000410.2	Genbank	CDS	624259	625317	.	+	0	ID=cds-ABJ54267.1;Parent=gene-SPD_0599;Dbxref=NCBI_GP:ABJ54267.1;Name=ABJ54267.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0689%3B equivalent gene in S.pneumoniae R6 %3D spr0604%3B identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101;gbkey=CDS;gene=murG;locus_tag=SPD_0599;product=UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=ABJ54267.1;transl_table=11
CP000410.2	Genbank	gene	625327	626517	.	+	.	ID=gene-SPD_0600;Name=divIB;gbkey=Gene;gene=divIB;gene_biotype=protein_coding;locus_tag=SPD_0600
CP000410.2	Genbank	CDS	625327	626517	.	+	0	ID=cds-ABJ55337.1;Parent=gene-SPD_0600;Dbxref=NCBI_GP:ABJ55337.1;Name=ABJ55337.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0690%3B equivalent gene in S.pneumoniae R6 %3D spr0605%3B identified by match to protein family HMM PF03799;gbkey=CDS;gene=divIB;locus_tag=SPD_0600;product=cell division protein DivIB;protein_id=ABJ55337.1;transl_table=11
CP000410.2	Genbank	gene	626648	626773	.	+	.	ID=gene-SPD_0601;Name=SPD_0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0601
CP000410.2	Genbank	CDS	626648	626773	.	+	0	ID=cds-ABJ54642.1;Parent=gene-SPD_0601;Dbxref=NCBI_GP:ABJ54642.1;Name=ABJ54642.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0691%3B identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_0601;product=hypothetical protein;protein_id=ABJ54642.1;transl_table=11
CP000410.2	Genbank	gene	626785	626916	.	+	.	ID=gene-SPD_0602;Name=SPD_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0602
CP000410.2	Genbank	CDS	626785	626916	.	+	0	ID=cds-ABJ53851.1;Parent=gene-SPD_0602;Dbxref=NCBI_GP:ABJ53851.1;Name=ABJ53851.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0692;gbkey=CDS;locus_tag=SPD_0602;product=hypothetical protein;protein_id=ABJ53851.1;transl_table=11
CP000410.2	Genbank	gene	627308	628105	.	+	.	ID=gene-SPD_0603;Name=SPD_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0603
CP000410.2	Genbank	CDS	627308	628105	.	+	0	ID=cds-ABJ55416.1;Parent=gene-SPD_0603;Dbxref=NCBI_GP:ABJ55416.1;Name=ABJ55416.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0694%3B equivalent gene in S.pneumoniae R6 %3D spr0607%3B identified by match to protein family HMM PF02163;gbkey=CDS;locus_tag=SPD_0603;product=peptidase%2C M50 family protein;protein_id=ABJ55416.1;transl_table=11
CP000410.2	Genbank	gene	628448	629461	.	+	.	ID=gene-SPD_0604;Name=SPD_0604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0604
CP000410.2	Genbank	CDS	628448	629461	.	+	0	ID=cds-ABJ54348.1;Parent=gene-SPD_0604;Dbxref=NCBI_GP:ABJ54348.1;Name=ABJ54348.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0695%3B equivalent gene in S.pneumoniae R6 %3D spr0608%3B identified by match to protein family HMM PF00899;gbkey=CDS;locus_tag=SPD_0604;product=HesA/MoeB/ThiF family protein;protein_id=ABJ54348.1;transl_table=11
CP000410.2	Genbank	pseudogene	629671	630504	.	+	.	ID=gene-SPD_0605;Name=SPD_0605;Note=equivalent gene in S.pneumoniae R6 %3D spr0610. The R6 gene has a point mutation in the same spot causing the truncation%3B ABC transporter%2C ATP-binding protein%2C authentic truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0605;pseudo=true
CP000410.2	Genbank	gene	630497	631210	.	+	.	ID=gene-SPD_0606;Name=SPD_0606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0606
CP000410.2	Genbank	CDS	630497	631210	.	+	0	ID=cds-ABJ54137.1;Parent=gene-SPD_0606;Dbxref=NCBI_GP:ABJ54137.1;Name=ABJ54137.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0698%3B equivalent gene in S.pneumoniae R6 %3D spr0611%3B identified by match to protein family HMM PF01061;gbkey=CDS;locus_tag=SPD_0606;product=membrane protein%2C putative;protein_id=ABJ54137.1;transl_table=11
CP000410.2	Genbank	pseudogene	631484	631735	.	-	.	ID=gene-SPD_0607;Name=SPD_0607;Note=equivalent gene in S.pneumoniae R6 %3D spr0612%3B transposase%2C IS30 family protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0607;pseudo=true
CP000410.2	Genbank	gene	631945	632646	.	+	.	ID=gene-SPD_0608;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=SPD_0608
CP000410.2	Genbank	CDS	631945	632646	.	+	0	ID=cds-ABJ54645.1;Parent=gene-SPD_0608;Dbxref=NCBI_GP:ABJ54645.1;Name=ABJ54645.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0701%3B equivalent gene in S.pneumoniae R6 %3D spr0613%3B identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740;gbkey=CDS;gene=pyrF;locus_tag=SPD_0608;product=orotidine 5'-phosphate decarboxylase;protein_id=ABJ54645.1;transl_table=11
CP000410.2	Genbank	gene	632680	633312	.	+	.	ID=gene-SPD_0609;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SPD_0609
CP000410.2	Genbank	CDS	632680	633312	.	+	0	ID=cds-ABJ53830.1;Parent=gene-SPD_0609;Dbxref=NCBI_GP:ABJ53830.1;Name=ABJ53830.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0702%3B equivalent gene in S.pneumoniae R6 %3D spr0614%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR00336;gbkey=CDS;gene=pyrE;locus_tag=SPD_0609;product=orotate phosphoribosyltransferase;protein_id=ABJ53830.1;transl_table=11
CP000410.2	Genbank	gene	633492	633896	.	+	.	ID=gene-SPD_0610;Name=SPD_0610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0610
CP000410.2	Genbank	CDS	633492	633896	.	+	0	ID=cds-ABJ54360.1;Parent=gene-SPD_0610;Dbxref=NCBI_GP:ABJ54360.1;Name=ABJ54360.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0703%3B equivalent gene in S.pneumoniae R6 %3D spr0615;gbkey=CDS;locus_tag=SPD_0610;product=hypothetical protein;protein_id=ABJ54360.1;transl_table=11
CP000410.2	Genbank	gene	633992	634756	.	+	.	ID=gene-SPD_0611;Name=SPD_0611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0611
CP000410.2	Genbank	CDS	633992	634756	.	+	0	ID=cds-ABJ55517.1;Parent=gene-SPD_0611;Dbxref=NCBI_GP:ABJ55517.1;Name=ABJ55517.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0704%3B equivalent gene in S.pneumoniae R6 %3D spr0616;gbkey=CDS;locus_tag=SPD_0611;product=membrane protein%2C putative;protein_id=ABJ55517.1;transl_table=11
CP000410.2	Genbank	gene	634756	635508	.	+	.	ID=gene-SPD_0612;Name=SPD_0612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0612
CP000410.2	Genbank	CDS	634756	635508	.	+	0	ID=cds-ABJ55320.1;Parent=gene-SPD_0612;Dbxref=NCBI_GP:ABJ55320.1;Name=ABJ55320.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0705%3B equivalent gene in S.pneumoniae R6 %3D spr0617;gbkey=CDS;locus_tag=SPD_0612;product=lipoprotein%2C putative;protein_id=ABJ55320.1;transl_table=11
CP000410.2	Genbank	gene	635512	636216	.	+	.	ID=gene-SPD_0613;Name=SPD_0613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0613
CP000410.2	Genbank	CDS	635512	636216	.	+	0	ID=cds-ABJ54250.1;Parent=gene-SPD_0613;Dbxref=NCBI_GP:ABJ54250.1;Name=ABJ54250.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0706%3B equivalent gene in S.pneumoniae R6 %3D spr0618;gbkey=CDS;locus_tag=SPD_0613;product=membrane protein%2C putative;protein_id=ABJ54250.1;transl_table=11
CP000410.2	Genbank	gene	636213	636860	.	+	.	ID=gene-SPD_0614;Name=SPD_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0614
CP000410.2	Genbank	CDS	636213	636860	.	+	0	ID=cds-ABJ54680.1;Parent=gene-SPD_0614;Dbxref=NCBI_GP:ABJ54680.1;Name=ABJ54680.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0707%3B equivalent gene in S.pneumoniae R6 %3D spr0619%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0614;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54680.1;transl_table=11
CP000410.2	Genbank	pseudogene	636940	637805	.	-	.	ID=gene-SPD_0615;Name=SPD_0615;Note=equivalent gene in S.pneumoniae R6 %3D spr0621%3B ABC transporter%2C substrate-binding protein%2C authentic truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0615;pseudo=true
CP000410.2	Genbank	gene	637817	638575	.	-	.	ID=gene-SPD_0616;Name=SPD_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0616
CP000410.2	Genbank	CDS	637817	638575	.	-	0	ID=cds-ABJ53648.1;Parent=gene-SPD_0616;Dbxref=NCBI_GP:ABJ53648.1;Name=ABJ53648.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0709%3B equivalent gene in S.pneumoniae R6 %3D spr0622%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0616;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ53648.1;transl_table=11
CP000410.2	Genbank	gene	638576	639253	.	-	.	ID=gene-SPD_0617;Name=SPD_0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0617
CP000410.2	Genbank	CDS	638576	639253	.	-	0	ID=cds-ABJ54311.1;Parent=gene-SPD_0617;Dbxref=NCBI_GP:ABJ54311.1;Name=ABJ54311.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0710%3B equivalent gene in S.pneumoniae R6 %3D spr0623%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_0617;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ54311.1;transl_table=11
CP000410.2	Genbank	gene	639213	639893	.	-	.	ID=gene-SPD_0618;Name=SPD_0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0618
CP000410.2	Genbank	CDS	639213	639893	.	-	0	ID=cds-ABJ54912.1;Parent=gene-SPD_0618;Dbxref=NCBI_GP:ABJ54912.1;Name=ABJ54912.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0711%3B equivalent gene in S.pneumoniae R6 %3D spr0624%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_0618;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ54912.1;transl_table=11
CP000410.2	Genbank	gene	640108	640254	.	+	.	ID=gene-SPD_0619;Name=SPD_0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0619
CP000410.2	Genbank	CDS	640108	640254	.	+	0	ID=cds-ABJ54101.1;Parent=gene-SPD_0619;Dbxref=NCBI_GP:ABJ54101.1;Name=ABJ54101.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0712%3B equivalent gene in S.pneumoniae R6 %3D spr0625;gbkey=CDS;locus_tag=SPD_0619;product=hypothetical protein;protein_id=ABJ54101.1;transl_table=11
CP000410.2	Genbank	gene	640382	641872	.	+	.	ID=gene-SPD_0620;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SPD_0620
CP000410.2	Genbank	CDS	640382	641872	.	+	0	ID=cds-ABJ55386.1;Parent=gene-SPD_0620;Dbxref=NCBI_GP:ABJ55386.1;Name=ABJ55386.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0713%3B equivalent gene in S.pneumoniae R6 %3D spr0626%3B identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499;gbkey=CDS;gene=lysS;locus_tag=SPD_0620;product=lysyl-tRNA synthetase;protein_id=ABJ55386.1;transl_table=11
CP000410.2	Genbank	gene	642497	643633	.	+	.	ID=gene-SPD_0621;Name=lctO;gbkey=Gene;gene=lctO;gene_biotype=protein_coding;locus_tag=SPD_0621
CP000410.2	Genbank	CDS	642497	643633	.	+	0	ID=cds-ABJ55445.1;Parent=gene-SPD_0621;Dbxref=NCBI_GP:ABJ55445.1;Name=ABJ55445.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0715%3B equivalent gene in S.pneumoniae R6 %3D spr0627%3B identified by match to protein family HMM PF01070%3B match to protein family HMM TIGR02708;gbkey=CDS;gene=lctO;locus_tag=SPD_0621;product=lactate oxidase;protein_id=ABJ55445.1;transl_table=11
CP000410.2	Genbank	gene	644188	644856	.	+	.	ID=gene-SPD_0622;Name=SPD_0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0622
CP000410.2	Genbank	CDS	644188	644856	.	+	0	ID=cds-ABJ54601.1;Parent=gene-SPD_0622;Dbxref=NCBI_GP:ABJ54601.1;Name=ABJ54601.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0716%3B equivalent gene in S.pneumoniae R6 %3D spr0628%3B identified by match to protein family HMM PF03070;gbkey=CDS;locus_tag=SPD_0622;product=transcriptional regulator%2C TENA/THI-4 family protein%2C putative;protein_id=ABJ54601.1;transl_table=11
CP000410.2	Genbank	gene	645145	645927	.	+	.	ID=gene-SPD_0623;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=SPD_0623
CP000410.2	Genbank	CDS	645145	645927	.	+	0	ID=cds-ABJ53957.1;Parent=gene-SPD_0623;Dbxref=NCBI_GP:ABJ53957.1;Name=ABJ53957.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0717%3B equivalent gene in S.pneumoniae R6 %3D spr0629%3B identified by match to protein family HMM PF02110%3B match to protein family HMM TIGR00694;gbkey=CDS;gene=thiM;locus_tag=SPD_0623;product=hydroxyethylthiazole kinase;protein_id=ABJ53957.1;transl_table=11
CP000410.2	Genbank	gene	645929	646558	.	+	.	ID=gene-SPD_0624;Name=thiE-1;gbkey=Gene;gene=thiE-1;gene_biotype=protein_coding;locus_tag=SPD_0624
CP000410.2	Genbank	CDS	645929	646558	.	+	0	ID=cds-ABJ54832.1;Parent=gene-SPD_0624;Dbxref=NCBI_GP:ABJ54832.1;Name=ABJ54832.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0718%3B equivalent gene in S.pneumoniae R6 %3D spr0630%3B identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693;gbkey=CDS;gene=thiE-1;locus_tag=SPD_0624;product=thiamine-phosphate pyrophosphorylase;protein_id=ABJ54832.1;transl_table=11
CP000410.2	Genbank	gene	647116	647676	.	+	.	ID=gene-SPD_0625;Name=SPD_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0625
CP000410.2	Genbank	CDS	647116	647676	.	+	0	ID=cds-ABJ54375.1;Parent=gene-SPD_0625;Dbxref=NCBI_GP:ABJ54375.1;Name=ABJ54375.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0719%3B equivalent gene in S.pneumoniae R6 %3D spr0631;gbkey=CDS;locus_tag=SPD_0625;product=membrane protein%2C putative;protein_id=ABJ54375.1;transl_table=11
CP000410.2	Genbank	gene	647677	649062	.	+	.	ID=gene-SPD_0626;Name=SPD_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0626
CP000410.2	Genbank	CDS	647677	649062	.	+	0	ID=cds-ABJ55082.1;Parent=gene-SPD_0626;Dbxref=NCBI_GP:ABJ55082.1;Name=ABJ55082.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0720%3B equivalent gene in S.pneumoniae R6 %3D spr0632%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0626;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ55082.1;transl_table=11
CP000410.2	Genbank	gene	649064	649714	.	+	.	ID=gene-SPD_0627;Name=SPD_0627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0627
CP000410.2	Genbank	CDS	649064	649714	.	+	0	ID=cds-ABJ54625.1;Parent=gene-SPD_0627;Dbxref=NCBI_GP:ABJ54625.1;Name=ABJ54625.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0721%3B equivalent gene in S.pneumoniae R6 %3D spr0633;gbkey=CDS;locus_tag=SPD_0627;product=membrane protein%2C putative;protein_id=ABJ54625.1;transl_table=11
CP000410.2	Genbank	gene	649725	650417	.	+	.	ID=gene-SPD_0628;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=SPD_0628
CP000410.2	Genbank	CDS	649725	650417	.	+	0	ID=cds-ABJ55409.1;Parent=gene-SPD_0628;Dbxref=NCBI_GP:ABJ55409.1;Name=ABJ55409.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0722%3B equivalent gene in S.pneumoniae R6 %3D spr0634%3B identified by match to protein family HMM PF03070;gbkey=CDS;gene=tenA;locus_tag=SPD_0628;product=transcriptional activator TenA%2C TENA/THI-4 family protein;protein_id=ABJ55409.1;transl_table=11
CP000410.2	Genbank	gene	650422	650946	.	+	.	ID=gene-SPD_0629;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=SPD_0629
CP000410.2	Genbank	CDS	650422	650946	.	+	0	ID=cds-ABJ55000.1;Parent=gene-SPD_0629;Dbxref=NCBI_GP:ABJ55000.1;Name=ABJ55000.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0723%3B equivalent gene in S.pneumoniae R6 %3D spr0635%3B identified by match to protein family HMM TIGR02359;gbkey=CDS;gene=thiW;locus_tag=SPD_0629;product=thiW protein;protein_id=ABJ55000.1;transl_table=11
CP000410.2	Genbank	gene	650946	651749	.	+	.	ID=gene-SPD_0630;Name=SPD_0630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0630
CP000410.2	Genbank	CDS	650946	651749	.	+	0	ID=cds-ABJ53950.1;Parent=gene-SPD_0630;Dbxref=NCBI_GP:ABJ53950.1;Name=ABJ53950.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0724%3B equivalent gene in S.pneumoniae R6 %3D spr0636%3B identified by match to protein family HMM PF02110;gbkey=CDS;locus_tag=SPD_0630;product=hydroxyethylthiazole kinase%2C putative;protein_id=ABJ53950.1;transl_table=11
CP000410.2	Genbank	gene	651742	652374	.	+	.	ID=gene-SPD_0631;Name=thiE-2;gbkey=Gene;gene=thiE-2;gene_biotype=protein_coding;locus_tag=SPD_0631
CP000410.2	Genbank	CDS	651742	652374	.	+	0	ID=cds-ABJ53945.1;Parent=gene-SPD_0631;Dbxref=NCBI_GP:ABJ53945.1;Name=ABJ53945.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0725%3B equivalent gene in S.pneumoniae R6 %3D spr0637%3B identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693;gbkey=CDS;gene=thiE-2;locus_tag=SPD_0631;product=thiamine-phosphate pyrophosphorylase;protein_id=ABJ53945.1;transl_table=11
CP000410.2	Genbank	gene	652583	653374	.	-	.	ID=gene-SPD_0632;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=SPD_0632
CP000410.2	Genbank	CDS	652583	653374	.	-	0	ID=cds-ABJ54849.1;Parent=gene-SPD_0632;Dbxref=NCBI_GP:ABJ54849.1;Name=ABJ54849.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0726%3B equivalent gene in S.pneumoniae R6 %3D spr0638%3B identified by match to protein family HMM TIGR00097;gbkey=CDS;gene=thiD;locus_tag=SPD_0632;product=phosphomethylpyrimidine kinase;protein_id=ABJ54849.1;transl_table=11
CP000410.2	Genbank	gene	653740	654135	.	+	.	ID=gene-SPD_0633;Name=SPD_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0633
CP000410.2	Genbank	CDS	653740	654135	.	+	0	ID=cds-ABJ53772.1;Parent=gene-SPD_0633;Dbxref=NCBI_GP:ABJ53772.1;Name=ABJ53772.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0727%3B equivalent gene in S.pneumoniae R6 %3D spr0639%3B identified by match to protein family HMM PF03965%3B match to protein family HMM TIGR02698;gbkey=CDS;locus_tag=SPD_0633;product=transcriptional regulator%2C putative;protein_id=ABJ53772.1;transl_table=11
CP000410.2	Genbank	gene	654146	654517	.	+	.	ID=gene-SPD_0634;Name=SPD_0634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0634
CP000410.2	Genbank	CDS	654146	654517	.	+	0	ID=cds-ABJ54623.1;Parent=gene-SPD_0634;Dbxref=NCBI_GP:ABJ54623.1;Name=ABJ54623.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0728%3B equivalent gene in S.pneumoniae R6 %3D spr0640;gbkey=CDS;locus_tag=SPD_0634;product=hypothetical protein;protein_id=ABJ54623.1;transl_table=11
CP000410.2	Genbank	gene	654527	656770	.	+	.	ID=gene-SPD_0635;Name=SPD_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0635
CP000410.2	Genbank	CDS	654527	656770	.	+	0	ID=cds-ABJ55473.1;Parent=gene-SPD_0635;Dbxref=NCBI_GP:ABJ55473.1;Name=ABJ55473.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0729%3B equivalent gene in S.pneumoniae R6 %3D spr0641%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=SPD_0635;product=cation-transporting ATPase%2C E1-E2 family protein;protein_id=ABJ55473.1;transl_table=11
CP000410.2	Genbank	gene	656977	658752	.	+	.	ID=gene-SPD_0636;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=protein_coding;locus_tag=SPD_0636
CP000410.2	Genbank	CDS	656977	658752	.	+	0	ID=cds-ABJ54415.1;Parent=gene-SPD_0636;Dbxref=NCBI_GP:ABJ54415.1;Name=ABJ54415.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0730%3B equivalent gene in S.pneumoniae R6 %3D spr0642%3B identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR02720;gbkey=CDS;gene=spxB;locus_tag=SPD_0636;product=pyruvate oxidase;protein_id=ABJ54415.1;transl_table=11
CP000410.2	Genbank	gene	658863	659210	.	+	.	ID=gene-SPD_0637;Name=SPD_0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0637
CP000410.2	Genbank	CDS	658863	659210	.	+	0	ID=cds-ABJ55374.1;Parent=gene-SPD_0637;Dbxref=NCBI_GP:ABJ55374.1;Name=ABJ55374.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0731%3B equivalent gene in S.pneumoniae R6 %3D spr0643%3B identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=SPD_0637;product=glyoxalase family protein;protein_id=ABJ55374.1;transl_table=11
CP000410.2	Genbank	gene	659327	659980	.	-	.	ID=gene-SPD_0638;Name=SPD_0638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0638
CP000410.2	Genbank	CDS	659327	659980	.	-	0	ID=cds-ABJ54498.1;Parent=gene-SPD_0638;Dbxref=NCBI_GP:ABJ54498.1;Name=ABJ54498.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0811%3B equivalent gene in S.pneumoniae R6 %3D spr0644;gbkey=CDS;locus_tag=SPD_0638;product=transposase family protein;protein_id=ABJ54498.1;transl_table=11
CP000410.2	Genbank	gene	659868	660215	.	-	.	ID=gene-SPD_0639;Name=SPD_0639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0639
CP000410.2	Genbank	CDS	659868	660215	.	-	0	ID=cds-ABJ55074.1;Parent=gene-SPD_0639;Dbxref=NCBI_GP:ABJ55074.1;Name=ABJ55074.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1487%3B equivalent gene in S.pneumoniae R6 %3D spr0645;gbkey=CDS;locus_tag=SPD_0639;product=hypothetical protein;protein_id=ABJ55074.1;transl_table=11
CP000410.2	Genbank	pseudogene	660648	660944	.	+	.	ID=gene-SPD_0640;Name=SPD_0640;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0735%3B equivalent gene in S.pneumoniae R6 %3D spr0646%3B phospho-beta-gluco or galactosidase%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0640;pseudo=true
CP000410.2	Genbank	gene	661065	662009	.	+	.	ID=gene-SPD_0641;Name=manA;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=SPD_0641
CP000410.2	Genbank	CDS	661065	662009	.	+	0	ID=cds-ABJ54573.1;Parent=gene-SPD_0641;Dbxref=NCBI_GP:ABJ54573.1;Name=ABJ54573.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0736%3B equivalent gene in S.pneumoniae R6 %3D spr0647%3B identified by match to protein family HMM PF01238%3B match to protein family HMM TIGR00218;gbkey=CDS;gene=manA;locus_tag=SPD_0641;product=mannose-6-phosphate isomerase%2C class I;protein_id=ABJ54573.1;transl_table=11
CP000410.2	Genbank	gene	662112	663497	.	-	.	ID=gene-SPD_0642;Name=SPD_0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0642
CP000410.2	Genbank	CDS	662112	663497	.	-	0	ID=cds-ABJ53719.1;Parent=gene-SPD_0642;Dbxref=NCBI_GP:ABJ53719.1;Name=ABJ53719.1;Note=This gene may encode a frameshift. The COOH end is frameshifted relative to the TIGR4 ortholog. equivalent gene in S.pneumoniae TIGR4 %3D SP0737%3B equivalent gene in S.pneumoniae R6 %3D spr0648%3B identified by match to protein family HMM PF00209;gbkey=CDS;locus_tag=SPD_0642;product=sodium-dependent transporter;protein_id=ABJ53719.1;transl_table=11
CP000410.2	Genbank	pseudogene	663580	664325	.	+	.	ID=gene-SPD_0643;Name=SPD_0643;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0739%3B equivalent gene in S.pneumoniae R6 %3D spr0649. R6 has the same frame shift. TIGR4 and orthologs do not%3B transcriptional regulator%2C MerR family protein%2C authentic frameshift%3B identified by match to protein family HMM PF07739;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0643;pseudo=true
CP000410.2	Genbank	gene	664354	664809	.	-	.	ID=gene-SPD_0644;Name=SPD_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0644
CP000410.2	Genbank	CDS	664354	664809	.	-	0	ID=cds-ABJ53787.1;Parent=gene-SPD_0644;Dbxref=NCBI_GP:ABJ53787.1;Name=ABJ53787.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0740%3B equivalent gene in S.pneumoniae R6 %3D spr0650%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_0644;product=MutT/nudix family protein;protein_id=ABJ53787.1;transl_table=11
CP000410.2	Genbank	gene	664829	666004	.	-	.	ID=gene-SPD_0645;Name=SPD_0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0645
CP000410.2	Genbank	CDS	664829	666004	.	-	0	ID=cds-ABJ55177.1;Parent=gene-SPD_0645;Dbxref=NCBI_GP:ABJ55177.1;Name=ABJ55177.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0741%3B equivalent gene in S.pneumoniae R6 %3D spr0651%3B identified by match to protein family HMM PF03486%3B match to protein family HMM TIGR00275;gbkey=CDS;locus_tag=SPD_0645;product=hypothetical protein;protein_id=ABJ55177.1;transl_table=11
CP000410.2	Genbank	gene	666063	666908	.	-	.	ID=gene-SPD_0646;Name=SPD_0646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0646
CP000410.2	Genbank	CDS	666063	666908	.	-	0	ID=cds-ABJ55200.1;Parent=gene-SPD_0646;Dbxref=NCBI_GP:ABJ55200.1;Name=ABJ55200.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0742%3B equivalent gene in S.pneumoniae R6 %3D spr0652%3B identified by match to protein family HMM PF02645;gbkey=CDS;locus_tag=SPD_0646;product=hypothetical protein;protein_id=ABJ55200.1;transl_table=11
CP000410.2	Genbank	gene	667033	667590	.	+	.	ID=gene-SPD_0647;Name=SPD_0647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0647
CP000410.2	Genbank	CDS	667033	667590	.	+	0	ID=cds-ABJ55340.1;Parent=gene-SPD_0647;Dbxref=NCBI_GP:ABJ55340.1;Name=ABJ55340.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0743%3B equivalent gene in S.pneumoniae R6 %3D spr0653%3B identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=SPD_0647;product=transcriptional regulator%2C TetR family protein;protein_id=ABJ55340.1;transl_table=11
CP000410.2	Genbank	gene	667609	668076	.	+	.	ID=gene-SPD_0648;Name=SPD_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0648
CP000410.2	Genbank	CDS	667609	668076	.	+	0	ID=cds-ABJ54214.1;Parent=gene-SPD_0648;Dbxref=NCBI_GP:ABJ54214.1;Name=ABJ54214.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0744%3B equivalent gene in S.pneumoniae R6 %3D spr0654%3B identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=SPD_0648;product=cytidine and deoxycytidylate deaminase family protein;protein_id=ABJ54214.1;transl_table=11
CP000410.2	Genbank	gene	668144	668794	.	+	.	ID=gene-SPD_0649;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SPD_0649
CP000410.2	Genbank	CDS	668144	668794	.	+	0	ID=cds-ABJ53654.1;Parent=gene-SPD_0649;Dbxref=NCBI_GP:ABJ53654.1;Name=ABJ53654.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0745%3B equivalent gene in S.pneumoniae R6 %3D spr0655%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091;gbkey=CDS;gene=upp;locus_tag=SPD_0649;product=uracil phosphoribosyltransferase;protein_id=ABJ53654.1;transl_table=11
CP000410.2	Genbank	gene	668968	669558	.	+	.	ID=gene-SPD_0650;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=SPD_0650
CP000410.2	Genbank	CDS	668968	669558	.	+	0	ID=cds-ABJ54512.1;Parent=gene-SPD_0650;Dbxref=NCBI_GP:ABJ54512.1;Name=ABJ54512.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0746%3B equivalent gene in S.pneumoniae R6 %3D spr0656%3B identified by match to protein family HMM PF00574;gbkey=CDS;gene=clpP;locus_tag=SPD_0650;product=ATP-dependent Clp protease%2C proteolytic subunit ClpP;protein_id=ABJ54512.1;transl_table=11
CP000410.2	Genbank	gene	669637	669885	.	+	.	ID=gene-SPD_0651;Name=SPD_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0651
CP000410.2	Genbank	CDS	669637	669885	.	+	0	ID=cds-ABJ54927.1;Parent=gene-SPD_0651;Dbxref=NCBI_GP:ABJ54927.1;Name=ABJ54927.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0748%3B equivalent gene in S.pneumoniae R6 %3D spr0657;gbkey=CDS;locus_tag=SPD_0651;product=hypothetical protein;protein_id=ABJ54927.1;transl_table=11
CP000410.2	Genbank	gene	669987	671147	.	+	.	ID=gene-SPD_0652;Name=livJ;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=SPD_0652
CP000410.2	Genbank	CDS	669987	671147	.	+	0	ID=cds-ABJ54052.1;Parent=gene-SPD_0652;Dbxref=NCBI_GP:ABJ54052.1;Name=ABJ54052.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0749%3B equivalent gene in S.pneumoniae R6 %3D spr0659%3B identified by match to protein family HMM PF01094;gbkey=CDS;gene=livJ;locus_tag=SPD_0652;product=branched-chain amino acid ABC transporter%2C amino acid-binding protein;protein_id=ABJ54052.1;transl_table=11
CP000410.2	Genbank	gene	671415	672284	.	+	.	ID=gene-SPD_0653;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=SPD_0653
CP000410.2	Genbank	CDS	671415	672284	.	+	0	ID=cds-ABJ53622.1;Parent=gene-SPD_0653;Dbxref=NCBI_GP:ABJ53622.1;Name=ABJ53622.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0750%3B equivalent gene in S.pneumoniae R6 %3D spr0660%3B identified by match to protein family HMM PF02653;gbkey=CDS;gene=livH;locus_tag=SPD_0653;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=ABJ53622.1;transl_table=11
CP000410.2	Genbank	gene	672288	673244	.	+	.	ID=gene-SPD_0654;Name=livM;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=SPD_0654
CP000410.2	Genbank	CDS	672288	673244	.	+	0	ID=cds-ABJ54935.1;Parent=gene-SPD_0654;Dbxref=NCBI_GP:ABJ54935.1;Name=ABJ54935.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0751%3B equivalent gene in S.pneumoniae R6 %3D spr0661%3B identified by match to protein family HMM PF02653;gbkey=CDS;gene=livM;locus_tag=SPD_0654;product=branched-chain amino acid ABC transporter%2C permease protein;protein_id=ABJ54935.1;transl_table=11
CP000410.2	Genbank	gene	673244	674008	.	+	.	ID=gene-SPD_0655;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=SPD_0655
CP000410.2	Genbank	CDS	673244	674008	.	+	0	ID=cds-ABJ54532.1;Parent=gene-SPD_0655;Dbxref=NCBI_GP:ABJ54532.1;Name=ABJ54532.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0752%3B equivalent gene in S.pneumoniae R6 %3D spr0662%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=livG;locus_tag=SPD_0655;product=branched-chain amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ54532.1;transl_table=11
CP000410.2	Genbank	gene	674008	674718	.	+	.	ID=gene-SPD_0656;Name=livF;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=SPD_0656
CP000410.2	Genbank	CDS	674008	674718	.	+	0	ID=cds-ABJ54735.1;Parent=gene-SPD_0656;Dbxref=NCBI_GP:ABJ54735.1;Name=ABJ54735.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0753%3B equivalent gene in S.pneumoniae R6 %3D spr0663%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=livF;locus_tag=SPD_0656;product=branched-chain amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ54735.1;transl_table=11
CP000410.2	Genbank	gene	675132	675788	.	+	.	ID=gene-SPD_0657;Name=SPD_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0657
CP000410.2	Genbank	CDS	675132	675788	.	+	0	ID=cds-ABJ55162.1;Parent=gene-SPD_0657;Dbxref=NCBI_GP:ABJ55162.1;Name=ABJ55162.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0754%3B equivalent gene in S.pneumoniae R6 %3D spr0664%3B identified by match to protein family HMM PF00571%3B match to protein family HMM PF01842;gbkey=CDS;locus_tag=SPD_0657;product=acetoin utilization protein AcuB%2C putative;protein_id=ABJ55162.1;transl_table=11
CP000410.2	Genbank	gene	676002	676991	.	+	.	ID=gene-SPD_0658;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=SPD_0658
CP000410.2	Genbank	CDS	676002	676991	.	+	0	ID=cds-ABJ54568.1;Parent=gene-SPD_0658;Dbxref=NCBI_GP:ABJ54568.1;Name=ABJ54568.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0755%3B equivalent gene in S.pneumoniae R6 %3D spr0665%3B identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020;gbkey=CDS;gene=prfB;locus_tag=SPD_0658;product=peptide chain release factor 2;protein_id=ABJ54568.1;transl_table=11
CP000410.2	Genbank	gene	677009	677701	.	+	.	ID=gene-SPD_0659;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=SPD_0659
CP000410.2	Genbank	CDS	677009	677701	.	+	0	ID=cds-ABJ54050.1;Parent=gene-SPD_0659;Dbxref=NCBI_GP:ABJ54050.1;Name=ABJ54050.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0756%3B equivalent gene in S.pneumoniae R6 %3D spr0666%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02673;gbkey=CDS;gene=ftsE;locus_tag=SPD_0659;product=cell division ATP-binding protein FtsE;protein_id=ABJ54050.1;transl_table=11
CP000410.2	Genbank	gene	677694	678620	.	+	.	ID=gene-SPD_0660;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SPD_0660
CP000410.2	Genbank	CDS	677694	678620	.	+	0	ID=cds-ABJ54921.1;Parent=gene-SPD_0660;Dbxref=NCBI_GP:ABJ54921.1;Name=ABJ54921.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0757%3B equivalent gene in S.pneumoniae R6 %3D spr0667%3B identified by match to protein family HMM PF02687;gbkey=CDS;gene=ftsX;locus_tag=SPD_0660;product=cell division ABC transporter%2C permease protein FtsX;protein_id=ABJ54921.1;transl_table=11
CP000410.2	Genbank	gene	678906	681086	.	+	.	ID=gene-SPD_0661;Name=exp5;gbkey=Gene;gene=exp5;gene_biotype=protein_coding;locus_tag=SPD_0661
CP000410.2	Genbank	CDS	678906	681086	.	+	0	ID=cds-ABJ55450.1;Parent=gene-SPD_0661;Dbxref=NCBI_GP:ABJ55450.1;Name=ABJ55450.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0758%3B equivalent gene in S.pneumoniae R6 %3D spr0668%3B identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR02003;gbkey=CDS;gene=exp5;locus_tag=SPD_0661;product=PTS system%2C IIABC components;protein_id=ABJ55450.1;transl_table=11
CP000410.2	Genbank	gene	681138	681953	.	+	.	ID=gene-SPD_0662;Name=SPD_0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0662
CP000410.2	Genbank	CDS	681138	681953	.	+	0	ID=cds-ABJ54367.1;Parent=gene-SPD_0662;Dbxref=NCBI_GP:ABJ54367.1;Name=ABJ54367.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0760%3B equivalent gene in S.pneumoniae R6 %3D spr0669%3B identified by match to protein family HMM PF03372;gbkey=CDS;locus_tag=SPD_0662;product=endonuclease/exonuclease/phosphatase family protein;protein_id=ABJ54367.1;transl_table=11
CP000410.2	Genbank	gene	682093	683436	.	+	.	ID=gene-SPD_0663;Name=SPD_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0663
CP000410.2	Genbank	CDS	682093	683436	.	+	0	ID=cds-ABJ55184.1;Parent=gene-SPD_0663;Dbxref=NCBI_GP:ABJ55184.1;Name=ABJ55184.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0761%3B equivalent gene in S.pneumoniae R6 %3D spr0670%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=SPD_0663;product=ATP-dependent RNA helicase%2C DEAD/DEAH box family protein;protein_id=ABJ55184.1;transl_table=11
CP000410.2	Genbank	gene	683651	684841	.	+	.	ID=gene-SPD_0664;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=SPD_0664
CP000410.2	Genbank	CDS	683651	684841	.	+	0	ID=cds-ABJ53863.1;Parent=gene-SPD_0664;Dbxref=NCBI_GP:ABJ53863.1;Name=ABJ53863.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0762%3B equivalent gene in S.pneumoniae R6 %3D spr0671%3B identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034;gbkey=CDS;gene=metK;locus_tag=SPD_0664;product=S-adenosylmethionine synthetase;protein_id=ABJ53863.1;transl_table=11
CP000410.2	Genbank	gene	685394	686329	.	+	.	ID=gene-SPD_0665;Name=pyrDa;gbkey=Gene;gene=pyrDa;gene_biotype=protein_coding;locus_tag=SPD_0665
CP000410.2	Genbank	CDS	685394	686329	.	+	0	ID=cds-ABJ54983.1;Parent=gene-SPD_0665;Dbxref=NCBI_GP:ABJ54983.1;Name=ABJ54983.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0764%3B equivalent gene in S.pneumoniae R6 %3D spr0672%3B identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;gene=pyrDa;locus_tag=SPD_0665;product=dihydroorotate dehydrogenase A;protein_id=ABJ54983.1;transl_table=11
CP000410.2	Genbank	gene	686363	687400	.	+	.	ID=gene-SPD_0666;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SPD_0666
CP000410.2	Genbank	CDS	686363	687400	.	+	0	ID=cds-ABJ53630.1;Parent=gene-SPD_0666;Dbxref=NCBI_GP:ABJ53630.1;Name=ABJ53630.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0765%3B equivalent gene in S.pneumoniae R6 %3D spr0673%3B identified by match to protein family HMM PF06144%3B match to protein family HMM TIGR01128;gbkey=CDS;gene=holA;locus_tag=SPD_0666;product=DNA polymerase III%2C delta subunit;protein_id=ABJ53630.1;transl_table=11
CP000410.2	Genbank	gene	687573	688178	.	+	.	ID=gene-SPD_0667;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=SPD_0667
CP000410.2	Genbank	CDS	687573	688178	.	+	0	ID=cds-ABJ53843.1;Parent=gene-SPD_0667;Dbxref=NCBI_GP:ABJ53843.1;Name=ABJ53843.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0766%3B equivalent gene in S.pneumoniae R6 %3D spr0674%3B identified by match to protein family HMM PF00081%3B match to protein family HMM PF02777;gbkey=CDS;gene=sodA;locus_tag=SPD_0667;product=superoxide dismutase%2C manganese-dependent;protein_id=ABJ53843.1;transl_table=11
CP000410.2	Genbank	gene	688335	688865	.	+	.	ID=gene-SPD_0668;Name=SPD_0668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0668
CP000410.2	Genbank	CDS	688335	688865	.	+	0	ID=cds-ABJ54555.1;Parent=gene-SPD_0668;Dbxref=NCBI_GP:ABJ54555.1;Name=ABJ54555.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0767%3B equivalent gene in S.pneumoniae R6 %3D spr0675%3B identified by match to protein family HMM PF06265;gbkey=CDS;locus_tag=SPD_0668;product=hypothetical protein;protein_id=ABJ54555.1;transl_table=11
CP000410.2	Genbank	gene	688886	689971	.	+	.	ID=gene-SPD_0669;Name=SPD_0669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0669
CP000410.2	Genbank	CDS	688886	689971	.	+	0	ID=cds-ABJ55163.1;Parent=gene-SPD_0669;Dbxref=NCBI_GP:ABJ55163.1;Name=ABJ55163.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0768%3B equivalent gene in S.pneumoniae R6 %3D spr0676%3B identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048;gbkey=CDS;locus_tag=SPD_0669;product=radical SAM enzyme%2C Cfr family protein;protein_id=ABJ55163.1;transl_table=11
CP000410.2	Genbank	gene	690009	690440	.	+	.	ID=gene-SPD_0670;Name=SPD_0670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0670
CP000410.2	Genbank	CDS	690009	690440	.	+	0	ID=cds-ABJ54284.1;Parent=gene-SPD_0670;Dbxref=NCBI_GP:ABJ54284.1;Name=ABJ54284.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0677%3B identified by match to protein family HMM PF04892;gbkey=CDS;locus_tag=SPD_0670;product=conserved hypothetical%2C predicted membrane protein;protein_id=ABJ54284.1;transl_table=11
CP000410.2	Genbank	gene	690442	691983	.	+	.	ID=gene-SPD_0671;Name=SPD_0671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0671
CP000410.2	Genbank	CDS	690442	691983	.	+	0	ID=cds-ABJ54432.1;Parent=gene-SPD_0671;Dbxref=NCBI_GP:ABJ54432.1;Name=ABJ54432.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0770%3B equivalent gene in S.pneumoniae R6 %3D spr0678%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0671;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54432.1;transl_table=11
CP000410.2	Genbank	gene	692040	692843	.	-	.	ID=gene-SPD_0672;Name=SPD_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0672
CP000410.2	Genbank	CDS	692040	692843	.	-	0	ID=cds-ABJ55287.1;Parent=gene-SPD_0672;Dbxref=NCBI_GP:ABJ55287.1;Name=ABJ55287.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0771%3B equivalent gene in S.pneumoniae R6 %3D spr0679%3B identified by match to protein family HMM PF00160;gbkey=CDS;locus_tag=SPD_0672;product=peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;protein_id=ABJ55287.1;transl_table=11
CP000410.2	Genbank	gene	692927	693148	.	-	.	ID=gene-SPD_0673;Name=SPD_0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0673
CP000410.2	Genbank	CDS	692927	693148	.	-	0	ID=cds-ABJ55169.1;Parent=gene-SPD_0673;Dbxref=NCBI_GP:ABJ55169.1;Name=ABJ55169.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0772%3B equivalent gene in S.pneumoniae R6 %3D spr0680;gbkey=CDS;locus_tag=SPD_0673;product=hypothetical protein;protein_id=ABJ55169.1;transl_table=11
CP000410.2	Genbank	gene	694014	694286	.	+	.	ID=gene-SPD_0674;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SPD_0674
CP000410.2	Genbank	CDS	694014	694286	.	+	0	ID=cds-ABJ54325.1;Parent=gene-SPD_0674;Dbxref=NCBI_GP:ABJ54325.1;Name=ABJ54325.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0775%3B equivalent gene in S.pneumoniae R6 %3D spr0682%3B identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002;gbkey=CDS;gene=rpsP;locus_tag=SPD_0674;product=ribosomal protein S16;protein_id=ABJ54325.1;transl_table=11
CP000410.2	Genbank	gene	694306	694545	.	+	.	ID=gene-SPD_0675;Name=SPD_0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0675
CP000410.2	Genbank	CDS	694306	694545	.	+	0	ID=cds-ABJ53899.1;Parent=gene-SPD_0675;Dbxref=NCBI_GP:ABJ53899.1;Name=ABJ53899.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0776%3B equivalent gene in S.pneumoniae R6 %3D spr0683;gbkey=CDS;locus_tag=SPD_0675;product=hypothetical protein;protein_id=ABJ53899.1;transl_table=11
CP000410.2	Genbank	gene	695122	695550	.	+	.	ID=gene-SPD_0676;Name=SPD_0676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0676
CP000410.2	Genbank	CDS	695122	695550	.	+	0	ID=cds-ABJ54987.1;Parent=gene-SPD_0676;Dbxref=NCBI_GP:ABJ54987.1;Name=ABJ54987.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0777%3B equivalent gene in S.pneumoniae R6 %3D spr0684;gbkey=CDS;locus_tag=SPD_0676;product=hypothetical protein;protein_id=ABJ54987.1;transl_table=11
CP000410.2	Genbank	gene	695551	695910	.	+	.	ID=gene-SPD_0677;Name=SPD_0677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0677
CP000410.2	Genbank	CDS	695551	695910	.	+	0	ID=cds-ABJ54662.1;Parent=gene-SPD_0677;Dbxref=NCBI_GP:ABJ54662.1;Name=ABJ54662.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0777%3B equivalent gene in S.pneumoniae R6 %3D spr0685;gbkey=CDS;locus_tag=SPD_0677;product=hypothetical protein;protein_id=ABJ54662.1;transl_table=11
CP000410.2	Genbank	gene	695941	696459	.	+	.	ID=gene-SPD_0678;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SPD_0678
CP000410.2	Genbank	CDS	695941	696459	.	+	0	ID=cds-ABJ54545.1;Parent=gene-SPD_0678;Dbxref=NCBI_GP:ABJ54545.1;Name=ABJ54545.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0778%3B equivalent gene in S.pneumoniae R6 %3D spr0686%3B identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273;gbkey=CDS;gene=rimM;locus_tag=SPD_0678;product=16S rRNA processing protein RimM;protein_id=ABJ54545.1;transl_table=11
CP000410.2	Genbank	gene	696449	697168	.	+	.	ID=gene-SPD_0679;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SPD_0679
CP000410.2	Genbank	CDS	696449	697168	.	+	0	ID=cds-ABJ55191.1;Parent=gene-SPD_0679;Dbxref=NCBI_GP:ABJ55191.1;Name=ABJ55191.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0779%3B equivalent gene in S.pneumoniae R6 %3D spr0687%3B identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088;gbkey=CDS;gene=trmD;locus_tag=SPD_0679;product=tRNA (guanine-N1)-methyltransferase;protein_id=ABJ55191.1;transl_table=11
CP000410.2	Genbank	gene	697180	697518	.	+	.	ID=gene-SPD_0680;Name=SPD_0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0680
CP000410.2	Genbank	CDS	697180	697518	.	+	0	ID=cds-ABJ54091.1;Parent=gene-SPD_0680;Dbxref=NCBI_GP:ABJ54091.1;Name=ABJ54091.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0780%3B equivalent gene in S.pneumoniae R6 %3D spr0688%3B identified by match to protein family HMM PF03477;gbkey=CDS;locus_tag=SPD_0680;product=hypothetical protein;protein_id=ABJ54091.1;transl_table=11
CP000410.2	Genbank	gene	697549	697869	.	-	.	ID=gene-SPD_0681;Name=SPD_0681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0681
CP000410.2	Genbank	CDS	697549	697869	.	-	0	ID=cds-ABJ55118.1;Parent=gene-SPD_0681;Dbxref=NCBI_GP:ABJ55118.1;Name=ABJ55118.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0781%3B equivalent gene in S.pneumoniae R6 %3D spr0689;gbkey=CDS;locus_tag=SPD_0681;product=hypothetical protein;protein_id=ABJ55118.1;transl_table=11
CP000410.2	Genbank	gene	697967	698182	.	+	.	ID=gene-SPD_0683;Name=SPD_0683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0683
CP000410.2	Genbank	CDS	697967	698182	.	+	0	ID=cds-ABJ55343.1;Parent=gene-SPD_0683;Dbxref=NCBI_GP:ABJ55343.1;Name=ABJ55343.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0782%3B equivalent gene in S.pneumoniae R6 %3D spr0690;gbkey=CDS;locus_tag=SPD_0683;product=hypothetical protein;protein_id=ABJ55343.1;transl_table=11
CP000410.2	Genbank	gene	698179	698325	.	-	.	ID=gene-SPD_0682;Name=SPD_0682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0682
CP000410.2	Genbank	CDS	698179	698325	.	-	0	ID=cds-ABJ54580.1;Parent=gene-SPD_0682;Dbxref=NCBI_GP:ABJ54580.1;Name=ABJ54580.1;gbkey=CDS;locus_tag=SPD_0682;product=hypothetical protein;protein_id=ABJ54580.1;transl_table=11
CP000410.2	Genbank	gene	698386	698922	.	-	.	ID=gene-SPD_0684;Name=SPD_0684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0684
CP000410.2	Genbank	CDS	698386	698922	.	-	0	ID=cds-ABJ53725.1;Parent=gene-SPD_0684;Dbxref=NCBI_GP:ABJ53725.1;Name=ABJ53725.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0783%3B equivalent gene in S.pneumoniae R6 %3D spr0691%3B identified by match to protein family HMM PF02632;gbkey=CDS;locus_tag=SPD_0684;product=biotin synthase (BioY family protein)%2C putative;protein_id=ABJ53725.1;transl_table=11
CP000410.2	Genbank	gene	699119	700465	.	-	.	ID=gene-SPD_0685;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=SPD_0685
CP000410.2	Genbank	CDS	699119	700465	.	-	0	ID=cds-ABJ55012.1;Parent=gene-SPD_0685;Dbxref=NCBI_GP:ABJ55012.1;Name=ABJ55012.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0784%3B equivalent gene in S.pneumoniae R6 %3D spr0692%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF01266%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01421;gbkey=CDS;gene=gor;locus_tag=SPD_0685;product=glutathione-disulfide reductase;protein_id=ABJ55012.1;transl_table=11
CP000410.2	Genbank	gene	700730	701929	.	+	.	ID=gene-SPD_0686;Name=SPD_0686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0686
CP000410.2	Genbank	CDS	700730	701929	.	+	0	ID=cds-ABJ54007.1;Parent=gene-SPD_0686;Dbxref=NCBI_GP:ABJ54007.1;Name=ABJ54007.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0785%3B equivalent gene in S.pneumoniae R6 %3D spr0693%3B identified by match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=SPD_0686;product=efflux transporter%2C RND family protein%2C MFP subunit;protein_id=ABJ54007.1;transl_table=11
CP000410.2	Genbank	gene	701913	702614	.	+	.	ID=gene-SPD_0687;Name=SPD_0687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0687
CP000410.2	Genbank	CDS	701913	702614	.	+	0	ID=cds-ABJ54281.1;Parent=gene-SPD_0687;Dbxref=NCBI_GP:ABJ54281.1;Name=ABJ54281.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0786%3B equivalent gene in S.pneumoniae R6 %3D spr0694%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0687;product=ABC transporter ATP-binding protein;protein_id=ABJ54281.1;transl_table=11
CP000410.2	Genbank	gene	702616	703875	.	+	.	ID=gene-SPD_0688;Name=SPD_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0688
CP000410.2	Genbank	CDS	702616	703875	.	+	0	ID=cds-ABJ55181.1;Parent=gene-SPD_0688;Dbxref=NCBI_GP:ABJ55181.1;Name=ABJ55181.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0787%3B equivalent gene in S.pneumoniae R6 %3D spr0695%3B identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=SPD_0688;product=efflux ABC transporter%2C permease protein;protein_id=ABJ55181.1;transl_table=11
CP000410.2	Genbank	gene	703999	705996	.	+	.	ID=gene-SPD_0689;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=SPD_0689
CP000410.2	Genbank	CDS	703999	705996	.	+	0	ID=cds-ABJ54525.1;Parent=gene-SPD_0689;Dbxref=NCBI_GP:ABJ54525.1;Name=ABJ54525.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0788%3B equivalent gene in S.pneumoniae R6 %3D spr0696%3B identified by match to protein family HMM PF01588%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399;gbkey=CDS;gene=metG;locus_tag=SPD_0689;product=methionyl-tRNA synthetase;protein_id=ABJ54525.1;transl_table=11
CP000410.2	Genbank	gene	706046	706237	.	+	.	ID=gene-SPD_0690;Name=SPD_0690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0690
CP000410.2	Genbank	CDS	706046	706237	.	+	0	ID=cds-ABJ55354.1;Parent=gene-SPD_0690;Dbxref=NCBI_GP:ABJ55354.1;Name=ABJ55354.1;gbkey=CDS;locus_tag=SPD_0690;product=hypothetical protein;protein_id=ABJ55354.1;transl_table=11
CP000410.2	Genbank	gene	706327	706647	.	+	.	ID=gene-SPD_0691;Name=SPD_0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0691
CP000410.2	Genbank	CDS	706327	706647	.	+	0	ID=cds-ABJ53696.1;Parent=gene-SPD_0691;Dbxref=NCBI_GP:ABJ53696.1;Name=ABJ53696.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0789%3B equivalent gene in S.pneumoniae R6 %3D spr0697%3B identified by match to protein family HMM PF03551;gbkey=CDS;locus_tag=SPD_0691;product=transcriptional regulator%2C PadR family protein;protein_id=ABJ53696.1;transl_table=11
CP000410.2	Genbank	gene	706651	707526	.	+	.	ID=gene-SPD_0692;Name=SPD_0692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0692
CP000410.2	Genbank	CDS	706651	707526	.	+	0	ID=cds-ABJ55008.1;Parent=gene-SPD_0692;Dbxref=NCBI_GP:ABJ55008.1;Name=ABJ55008.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0790%3B equivalent gene in S.pneumoniae R6 %3D spr0698;gbkey=CDS;locus_tag=SPD_0692;product=membrane protein%2C putative;protein_id=ABJ55008.1;transl_table=11
CP000410.2	Genbank	gene	707541	708467	.	+	.	ID=gene-SPD_0693;Name=SPD_0693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0693
CP000410.2	Genbank	CDS	707541	708467	.	+	0	ID=cds-ABJ54082.1;Parent=gene-SPD_0693;Dbxref=NCBI_GP:ABJ54082.1;Name=ABJ54082.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0791%3B equivalent gene in S.pneumoniae R6 %3D spr0699%3B identified by match to protein family HMM PF00248;gbkey=CDS;locus_tag=SPD_0693;product=oxidoreductase%2C aldo/keto reductase family protein;protein_id=ABJ54082.1;transl_table=11
CP000410.2	Genbank	gene	708546	708803	.	+	.	ID=gene-SPD_0694;Name=SPD_0694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0694
CP000410.2	Genbank	CDS	708546	708803	.	+	0	ID=cds-ABJ54726.1;Parent=gene-SPD_0694;Dbxref=NCBI_GP:ABJ54726.1;Name=ABJ54726.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0792%3B equivalent gene in S.pneumoniae R6 %3D spr0700;gbkey=CDS;locus_tag=SPD_0694;product=hypothetical protein;protein_id=ABJ54726.1;transl_table=11
CP000410.2	Genbank	gene	708796	709494	.	+	.	ID=gene-SPD_0695;Name=SPD_0695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0695
CP000410.2	Genbank	CDS	708796	709494	.	+	0	ID=cds-ABJ53839.1;Parent=gene-SPD_0695;Dbxref=NCBI_GP:ABJ53839.1;Name=ABJ53839.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0793%3B equivalent gene in S.pneumoniae R6 %3D spr0701%3B identified by match to protein family HMM PF00106;gbkey=CDS;locus_tag=SPD_0695;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=ABJ53839.1;transl_table=11
CP000410.2	Genbank	gene	709505	709984	.	+	.	ID=gene-SPD_0696;Name=SPD_0696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0696
CP000410.2	Genbank	CDS	709505	709984	.	+	0	ID=cds-ABJ54453.1;Parent=gene-SPD_0696;Dbxref=NCBI_GP:ABJ54453.1;Name=ABJ54453.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0794%3B equivalent gene in S.pneumoniae R6 %3D spr0702%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_0696;product=MutT/nudix family protein;protein_id=ABJ54453.1;transl_table=11
CP000410.2	Genbank	gene	709992	710720	.	+	.	ID=gene-SPD_0697;Name=SPD_0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0697
CP000410.2	Genbank	CDS	709992	710720	.	+	0	ID=cds-ABJ55084.1;Parent=gene-SPD_0697;Dbxref=NCBI_GP:ABJ55084.1;Name=ABJ55084.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0703%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0697;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55084.1;transl_table=11
CP000410.2	Genbank	gene	710762	711631	.	+	.	ID=gene-SPD_0698;Name=SPD_0698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0698
CP000410.2	Genbank	CDS	710762	711631	.	+	0	ID=cds-ABJ54215.1;Parent=gene-SPD_0698;Dbxref=NCBI_GP:ABJ54215.1;Name=ABJ54215.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0795%3B equivalent gene in S.pneumoniae R6 %3D spr0704%3B identified by match to protein family HMM PF02896;gbkey=CDS;locus_tag=SPD_0698;product=hypothetical protein;protein_id=ABJ54215.1;transl_table=11
CP000410.2	Genbank	gene	711606	712046	.	+	.	ID=gene-SPD_0699;Name=SPD_0699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0699
CP000410.2	Genbank	CDS	711606	712046	.	+	0	ID=cds-ABJ54941.1;Parent=gene-SPD_0699;Dbxref=NCBI_GP:ABJ54941.1;Name=ABJ54941.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0796%3B equivalent gene in S.pneumoniae R6 %3D spr0705%3B identified by match to protein family HMM PF06171;gbkey=CDS;locus_tag=SPD_0699;product=hypothetical protein;protein_id=ABJ54941.1;transl_table=11
CP000410.2	Genbank	gene	712169	714715	.	+	.	ID=gene-SPD_0700;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SPD_0700
CP000410.2	Genbank	CDS	712169	714715	.	+	0	ID=cds-ABJ53906.1;Parent=gene-SPD_0700;Dbxref=NCBI_GP:ABJ53906.1;Name=ABJ53906.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0797%3B equivalent gene in S.pneumoniae R6 %3D spr0706%3B identified by match to protein family HMM PF01433;gbkey=CDS;gene=pepN;locus_tag=SPD_0700;product=aminopeptidase N;protein_id=ABJ53906.1;transl_table=11
CP000410.2	Genbank	gene	714758	715498	.	+	.	ID=gene-SPD_0701;Name=ciaR;gbkey=Gene;gene=ciaR;gene_biotype=protein_coding;locus_tag=SPD_0701
CP000410.2	Genbank	CDS	714758	715498	.	+	0	ID=cds-ABJ53761.1;Parent=gene-SPD_0701;Dbxref=NCBI_GP:ABJ53761.1;Name=ABJ53761.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0798%3B equivalent gene in S.pneumoniae R6 %3D spr0707%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;gene=ciaR;locus_tag=SPD_0701;product=DNA-binding response regulator CiaR;protein_id=ABJ53761.1;transl_table=11
CP000410.2	Genbank	gene	715488	716822	.	+	.	ID=gene-SPD_0702;Name=ciaH;gbkey=Gene;gene=ciaH;gene_biotype=protein_coding;locus_tag=SPD_0702
CP000410.2	Genbank	CDS	715488	716822	.	+	0	ID=cds-ABJ54985.1;Parent=gene-SPD_0702;Dbxref=NCBI_GP:ABJ54985.1;Name=ABJ54985.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0799%3B equivalent gene in S.pneumoniae R6 %3D spr0708%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;gene=ciaH;locus_tag=SPD_0702;product=sensor histidine kinase CiaH;protein_id=ABJ54985.1;transl_table=11
CP000410.2	Genbank	gene	716856	717143	.	-	.	ID=gene-SPD_0703;Name=SPD_0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0703
CP000410.2	Genbank	CDS	716856	717143	.	-	0	ID=cds-ABJ55514.1;Parent=gene-SPD_0703;Dbxref=NCBI_GP:ABJ55514.1;Name=ABJ55514.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0800%3B equivalent gene in S.pneumoniae R6 %3D spr0709;gbkey=CDS;locus_tag=SPD_0703;product=hypothetical protein;protein_id=ABJ55514.1;transl_table=11
CP000410.2	Genbank	gene	717142	718212	.	+	.	ID=gene-SPD_0704;Name=SPD_0704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0704
CP000410.2	Genbank	CDS	717142	718212	.	+	0	ID=cds-ABJ54690.1;Parent=gene-SPD_0704;Dbxref=NCBI_GP:ABJ54690.1;Name=ABJ54690.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0801%3B equivalent gene in S.pneumoniae R6 %3D spr0710%3B identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=SPD_0704;product=hypothetical protein;protein_id=ABJ54690.1;transl_table=11
CP000410.2	Genbank	gene	718412	720862	.	+	.	ID=gene-SPD_0705;Name=SPD_0705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0705
CP000410.2	Genbank	CDS	718412	720862	.	+	0	ID=cds-ABJ54964.1;Parent=gene-SPD_0705;Dbxref=NCBI_GP:ABJ54964.1;Name=ABJ54964.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0802%3B equivalent gene in S.pneumoniae R6 %3D spr0711%3B identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573%3B match to protein family HMM TIGR01407;gbkey=CDS;locus_tag=SPD_0705;product=DnaQ family exonuclease/DinG family helicase%2C putative;protein_id=ABJ54964.1;transl_table=11
CP000410.2	Genbank	gene	720899	722122	.	+	.	ID=gene-SPD_0706;Name=SPD_0706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0706
CP000410.2	Genbank	CDS	720899	722122	.	+	0	ID=cds-ABJ53872.1;Parent=gene-SPD_0706;Dbxref=NCBI_GP:ABJ53872.1;Name=ABJ53872.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0803%3B equivalent gene in S.pneumoniae R6 %3D spr0712%3B identified by match to protein family HMM PF01098;gbkey=CDS;locus_tag=SPD_0706;product=rod shape-determining protein RodA%2C putative;protein_id=ABJ53872.1;transl_table=11
CP000410.2	Genbank	gene	722133	722687	.	+	.	ID=gene-SPD_0707;Name=SPD_0707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0707
CP000410.2	Genbank	CDS	722133	722687	.	+	0	ID=cds-ABJ55249.1;Parent=gene-SPD_0707;Dbxref=NCBI_GP:ABJ55249.1;Name=ABJ55249.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0804%3B equivalent gene in S.pneumoniae R6 %3D spr0713%3B identified by match to protein family HMM PF01965%3B match to protein family HMM TIGR01383;gbkey=CDS;locus_tag=SPD_0707;product=4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein%2C putative;protein_id=ABJ55249.1;transl_table=11
CP000410.2	Genbank	gene	722772	723335	.	+	.	ID=gene-SPD_0708;Name=SPD_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0708
CP000410.2	Genbank	CDS	722772	723335	.	+	0	ID=cds-ABJ54169.1;Parent=gene-SPD_0708;Dbxref=NCBI_GP:ABJ54169.1;Name=ABJ54169.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0805%3B equivalent gene in S.pneumoniae R6 %3D spr0714%3B identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;locus_tag=SPD_0708;product=hydrolase%2C haloacid dehalogenase-like family protein;protein_id=ABJ54169.1;transl_table=11
CP000410.2	Genbank	gene	723350	725296	.	+	.	ID=gene-SPD_0709;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SPD_0709
CP000410.2	Genbank	CDS	723350	725296	.	+	0	ID=cds-ABJ54452.1;Parent=gene-SPD_0709;Dbxref=NCBI_GP:ABJ54452.1;Name=ABJ54452.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0806%3B equivalent gene in S.pneumoniae R6 %3D spr0715%3B identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059;gbkey=CDS;gene=gyrB;locus_tag=SPD_0709;product=DNA gyrase%2C B subunit;protein_id=ABJ54452.1;transl_table=11
CP000410.2	Genbank	gene	725378	727105	.	+	.	ID=gene-SPD_0710;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=SPD_0710
CP000410.2	Genbank	CDS	725378	727105	.	+	0	ID=cds-ABJ55189.1;Parent=gene-SPD_0710;Dbxref=NCBI_GP:ABJ55189.1;Name=ABJ55189.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0807%3B equivalent gene in S.pneumoniae R6 %3D spr0716%3B identified by match to protein family HMM PF06160;gbkey=CDS;gene=ezrA;locus_tag=SPD_0710;product=septation ring formation regulator EzrA;protein_id=ABJ55189.1;transl_table=11
CP000410.2	Genbank	gene	727899	728252	.	+	.	ID=gene-SPD_0711;Name=SPD_0711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0711
CP000410.2	Genbank	CDS	727899	728252	.	+	0	ID=cds-ABJ53904.1;Parent=gene-SPD_0711;Dbxref=NCBI_GP:ABJ53904.1;Name=ABJ53904.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1487%3B equivalent gene in S.pneumoniae R6 %3D spr0717;gbkey=CDS;locus_tag=SPD_0711;product=hypothetical protein;protein_id=ABJ53904.1;transl_table=11
CP000410.2	Genbank	gene	728284	728793	.	+	.	ID=gene-SPD_0712;Name=SPD_0712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0712
CP000410.2	Genbank	CDS	728284	728793	.	+	0	ID=cds-ABJ54710.1;Parent=gene-SPD_0712;Dbxref=NCBI_GP:ABJ54710.1;Name=ABJ54710.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0811%3B equivalent gene in S.pneumoniae R6 %3D spr0718;gbkey=CDS;locus_tag=SPD_0712;product=transposase family protein;protein_id=ABJ54710.1;transl_table=11
CP000410.2	Genbank	pseudogene	728879	729166	.	-	.	ID=gene-SPD_0713;Name=SPD_0713;Note=equivalent gene in S.pneumoniae R6 %3D spr0719%3B IS66 family element%2C Orf2%2C interruption;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0713;pseudo=true
CP000410.2	Genbank	gene	729427	729726	.	-	.	ID=gene-SPD_0714;Name=SPD_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0714
CP000410.2	Genbank	CDS	729427	729726	.	-	0	ID=cds-ABJ54118.1;Parent=gene-SPD_0714;Dbxref=NCBI_GP:ABJ54118.1;Name=ABJ54118.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0816%3B equivalent gene in S.pneumoniae R6 %3D spr0720;gbkey=CDS;locus_tag=SPD_0714;product=hypothetical protein;protein_id=ABJ54118.1;transl_table=11
CP000410.2	Genbank	gene	729891	730313	.	-	.	ID=gene-SPD_0715;Name=SPD_0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0715
CP000410.2	Genbank	CDS	729891	730313	.	-	0	ID=cds-ABJ53960.1;Parent=gene-SPD_0715;Dbxref=NCBI_GP:ABJ53960.1;Name=ABJ53960.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0817%3B equivalent gene in S.pneumoniae R6 %3D spr0721%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_0715;product=MutT/nudix family protein;protein_id=ABJ53960.1;transl_table=11
CP000410.2	Genbank	gene	730406	730753	.	+	.	ID=gene-SPD_0716;Name=SPD_0716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0716
CP000410.2	Genbank	CDS	730406	730753	.	+	0	ID=cds-ABJ55306.1;Parent=gene-SPD_0716;Dbxref=NCBI_GP:ABJ55306.1;Name=ABJ55306.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0299%3B equivalent gene in S.pneumoniae R6 %3D spr0722 In TIGR4 this gene is annotated as a truncation%3B however in R6 there are numerous near perfect copies as well as copies with a slightly longer version with a different end that is not present in either R6 or TIGR4 This indicates it may still function as a transposase%3B identified by match to protein family HMM PF01710;gbkey=CDS;locus_tag=SPD_0716;product=IS630-Spn1%2C transposase Orf1;protein_id=ABJ55306.1;transl_table=11
CP000410.2	Genbank	gene	731478	733736	.	-	.	ID=gene-SPD_0717;Name=clpE;gbkey=Gene;gene=clpE;gene_biotype=protein_coding;locus_tag=SPD_0717
CP000410.2	Genbank	CDS	731478	733736	.	-	0	ID=cds-ABJ54606.1;Parent=gene-SPD_0717;Dbxref=NCBI_GP:ABJ54606.1;Name=ABJ54606.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0820%3B equivalent gene in S.pneumoniae R6 %3D spr0725%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF02151%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;gene=clpE;locus_tag=SPD_0717;product=ATP-dependent Clp protease ATP-binding subunit ClpE;protein_id=ABJ54606.1;transl_table=11
CP000410.2	Genbank	gene	733965	734195	.	-	.	ID=gene-SPD_0718;Name=SPD_0718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0718
CP000410.2	Genbank	CDS	733965	734195	.	-	0	ID=cds-ABJ53829.1;Parent=gene-SPD_0718;Dbxref=NCBI_GP:ABJ53829.1;Name=ABJ53829.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0822%3B equivalent gene in S.pneumoniae R6 %3D spr0726;gbkey=CDS;locus_tag=SPD_0718;product=hypothetical protein;protein_id=ABJ53829.1;transl_table=11
CP000410.2	Genbank	gene	734385	735068	.	+	.	ID=gene-SPD_0719;Name=SPD_0719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0719
CP000410.2	Genbank	CDS	734385	735068	.	+	0	ID=cds-ABJ54894.1;Parent=gene-SPD_0719;Dbxref=NCBI_GP:ABJ54894.1;Name=ABJ54894.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0823%3B equivalent gene in S.pneumoniae R6 %3D spr0727%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_0719;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ54894.1;transl_table=11
CP000410.2	Genbank	gene	735068	735802	.	+	.	ID=gene-SPD_0720;Name=SPD_0720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0720
CP000410.2	Genbank	CDS	735068	735802	.	+	0	ID=cds-ABJ54030.1;Parent=gene-SPD_0720;Dbxref=NCBI_GP:ABJ54030.1;Name=ABJ54030.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0824%3B equivalent gene in S.pneumoniae R6 %3D spr0728%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0720;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ54030.1;transl_table=11
CP000410.2	Genbank	gene	735935	736813	.	+	.	ID=gene-SPD_0721;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=SPD_0721
CP000410.2	Genbank	CDS	735935	736813	.	+	0	ID=cds-ABJ54164.1;Parent=gene-SPD_0721;Dbxref=NCBI_GP:ABJ54164.1;Name=ABJ54164.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0825%3B equivalent gene in S.pneumoniae R6 %3D spr0729%3B identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882;gbkey=CDS;gene=folD;locus_tag=SPD_0721;product=methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=ABJ54164.1;transl_table=11
CP000410.2	Genbank	gene	736955	737827	.	+	.	ID=gene-SPD_0722;Name=SPD_0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0722
CP000410.2	Genbank	CDS	736955	737827	.	+	0	ID=cds-ABJ55330.1;Parent=gene-SPD_0722;Dbxref=NCBI_GP:ABJ55330.1;Name=ABJ55330.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0730%3B identified by match to protein family HMM PF01256%3B match to protein family HMM TIGR00196%3B similar to the C-terminus of Escherichia coli YjeF;gbkey=CDS;locus_tag=SPD_0722;product=YjeF-like protein;protein_id=ABJ55330.1;transl_table=11
CP000410.2	Genbank	gene	738109	738792	.	+	.	ID=gene-SPD_0723;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=SPD_0723
CP000410.2	Genbank	CDS	738109	738792	.	+	0	ID=cds-ABJ54742.1;Parent=gene-SPD_0723;Dbxref=NCBI_GP:ABJ54742.1;Name=ABJ54742.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0828%3B equivalent gene in S.pneumoniae R6 %3D spr0731%3B identified by match to protein family HMM PF06026%3B match to protein family HMM TIGR00021;gbkey=CDS;gene=rpiA;locus_tag=SPD_0723;product=ribose 5-phosphate isomerase A;protein_id=ABJ54742.1;transl_table=11
CP000410.2	Genbank	gene	738806	740017	.	+	.	ID=gene-SPD_0724;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=SPD_0724
CP000410.2	Genbank	CDS	738806	740017	.	+	0	ID=cds-ABJ54644.1;Parent=gene-SPD_0724;Dbxref=NCBI_GP:ABJ54644.1;Name=ABJ54644.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0829%3B equivalent gene in S.pneumoniae R6 %3D spr0732%3B identified by match to protein family HMM PF01676%3B match to protein family HMM TIGR01696;gbkey=CDS;gene=deoB;locus_tag=SPD_0724;product=phosphopentomutase;protein_id=ABJ54644.1;transl_table=11
CP000410.2	Genbank	pseudogene	740019	740561	.	+	.	ID=gene-SPD_0725;Name=SPD_0725;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0830%3B equivalent gene in S.pneumoniae R6 %3D spr0733. The TIGR4 protein is 44 amino acids longer than the D39 and R6 genes. Similar genes in other species are the same length as the TIGR4 gene%3B conserved hypothetical protein%2C truncation%3B identified by match to protein family HMM PF08002;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0725;pseudo=true
CP000410.2	Genbank	gene	740577	741386	.	+	.	ID=gene-SPD_0726;Name=SPD_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0726
CP000410.2	Genbank	CDS	740577	741386	.	+	0	ID=cds-ABJ53763.1;Parent=gene-SPD_0726;Dbxref=NCBI_GP:ABJ53763.1;Name=ABJ53763.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0831%3B equivalent gene in S.pneumoniae R6 %3D spr0734%3B identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01697%3B match to protein family HMM TIGR01700;gbkey=CDS;locus_tag=SPD_0726;product=purine nucleoside phosphorylase%2C family protein 2;protein_id=ABJ53763.1;transl_table=11
CP000410.2	Genbank	gene	741862	742593	.	+	.	ID=gene-SPD_0727;Name=SPD_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0727
CP000410.2	Genbank	CDS	741862	742593	.	+	0	ID=cds-ABJ54387.1;Parent=gene-SPD_0727;Dbxref=NCBI_GP:ABJ54387.1;Name=ABJ54387.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0833%3B equivalent gene in S.pneumoniae R6 %3D spr0735;gbkey=CDS;locus_tag=SPD_0727;product=hypothetical protein;protein_id=ABJ54387.1;transl_table=11
CP000410.2	Genbank	gene	742639	742842	.	+	.	ID=gene-SPD_0728;Name=SPD_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0728
CP000410.2	Genbank	CDS	742639	742842	.	+	0	ID=cds-ABJ55491.1;Parent=gene-SPD_0728;Dbxref=NCBI_GP:ABJ55491.1;Name=ABJ55491.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0833%3B equivalent gene in S.pneumoniae R6 %3D spr0736;gbkey=CDS;locus_tag=SPD_0728;product=hypothetical protein;protein_id=ABJ55491.1;transl_table=11
CP000410.2	Genbank	gene	742867	743379	.	+	.	ID=gene-SPD_0729;Name=SPD_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0729
CP000410.2	Genbank	CDS	742867	743379	.	+	0	ID=cds-ABJ55272.1;Parent=gene-SPD_0729;Dbxref=NCBI_GP:ABJ55272.1;Name=ABJ55272.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0834%3B equivalent gene in S.pneumoniae R6 %3D spr0737;gbkey=CDS;locus_tag=SPD_0729;product=hemolysin-related protein;protein_id=ABJ55272.1;transl_table=11
CP000410.2	Genbank	gene	744037	744747	.	+	.	ID=gene-SPD_0730;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SPD_0730
CP000410.2	Genbank	CDS	744037	744747	.	+	0	ID=cds-ABJ53917.1;Parent=gene-SPD_0730;Dbxref=NCBI_GP:ABJ53917.1;Name=ABJ53917.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0835%3B equivalent gene in S.pneumoniae R6 %3D spr0738%3B identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR00107;gbkey=CDS;gene=deoD;locus_tag=SPD_0730;product=purine nucleoside phosphorylase;protein_id=ABJ53917.1;transl_table=11
CP000410.2	Genbank	gene	744770	745294	.	-	.	ID=gene-SPD_0731;Name=SPD_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0731
CP000410.2	Genbank	CDS	744770	745294	.	-	0	ID=cds-ABJ55040.1;Parent=gene-SPD_0731;Dbxref=NCBI_GP:ABJ55040.1;Name=ABJ55040.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0837%3B equivalent gene in S.pneumoniae R6 %3D spr0739;gbkey=CDS;locus_tag=SPD_0731;product=DNA topology modulation protein FlaR%2C putative;protein_id=ABJ55040.1;transl_table=11
CP000410.2	Genbank	gene	745347	745583	.	-	.	ID=gene-SPD_0732;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SPD_0732
CP000410.2	Genbank	CDS	745347	745583	.	-	0	ID=cds-ABJ53976.1;Parent=gene-SPD_0732;Dbxref=NCBI_GP:ABJ53976.1;Name=ABJ53976.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0838%3B equivalent gene in S.pneumoniae R6 %3D spr0740%3B identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029;gbkey=CDS;gene=rpsT;locus_tag=SPD_0732;product=ribosomal protein S20;protein_id=ABJ53976.1;transl_table=11
CP000410.2	Genbank	gene	745651	746571	.	-	.	ID=gene-SPD_0733;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=SPD_0733
CP000410.2	Genbank	CDS	745651	746571	.	-	0	ID=cds-ABJ54070.1;Parent=gene-SPD_0733;Dbxref=NCBI_GP:ABJ54070.1;Name=ABJ54070.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0839%3B equivalent gene in S.pneumoniae R6 %3D spr0741%3B identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00554;gbkey=CDS;gene=coaA;locus_tag=SPD_0733;product=pantothenate kinase;protein_id=ABJ54070.1;transl_table=11
CP000410.2	Genbank	gene	746769	747209	.	+	.	ID=gene-SPD_0734;Name=SPD_0734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0734
CP000410.2	Genbank	CDS	746769	747209	.	+	0	ID=cds-ABJ54674.1;Parent=gene-SPD_0734;Dbxref=NCBI_GP:ABJ54674.1;Name=ABJ54674.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0840%3B equivalent gene in S.pneumoniae R6 %3D spr0742;gbkey=CDS;locus_tag=SPD_0734;product=membrane protein%2C putative;protein_id=ABJ54674.1;transl_table=11
CP000410.2	Genbank	gene	747416	748006	.	+	.	ID=gene-SPD_0735;Name=SPD_0735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0735
CP000410.2	Genbank	CDS	747416	748006	.	+	0	ID=cds-ABJ54395.1;Parent=gene-SPD_0735;Dbxref=NCBI_GP:ABJ54395.1;Name=ABJ54395.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0841%3B equivalent gene in S.pneumoniae R6 %3D spr0743%3B identified by match to protein family HMM PF05175;gbkey=CDS;locus_tag=SPD_0735;product=methyltransferase small domain%2C putative;protein_id=ABJ54395.1;transl_table=11
CP000410.2	Genbank	gene	748003	749280	.	+	.	ID=gene-SPD_0736;Name=pdp;gbkey=Gene;gene=pdp;gene_biotype=protein_coding;locus_tag=SPD_0736
CP000410.2	Genbank	CDS	748003	749280	.	+	0	ID=cds-ABJ54771.1;Parent=gene-SPD_0736;Dbxref=NCBI_GP:ABJ54771.1;Name=ABJ54771.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0842%3B equivalent gene in S.pneumoniae R6 %3D spr0744%3B identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644;gbkey=CDS;gene=pdp;locus_tag=SPD_0736;product=pyrimidine-nucleoside phosphorylase;protein_id=ABJ54771.1;transl_table=11
CP000410.2	Genbank	gene	749298	749960	.	+	.	ID=gene-SPD_0737;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=SPD_0737
CP000410.2	Genbank	CDS	749298	749960	.	+	0	ID=cds-ABJ55453.1;Parent=gene-SPD_0737;Dbxref=NCBI_GP:ABJ55453.1;Name=ABJ55453.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0843%3B equivalent gene in S.pneumoniae R6 %3D spr0745%3B identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC;locus_tag=SPD_0737;product=deoxyribose-phosphate aldolase;protein_id=ABJ55453.1;transl_table=11
CP000410.2	Genbank	gene	749947	750336	.	+	.	ID=gene-SPD_0738;Name=cdd-1;gbkey=Gene;gene=cdd-1;gene_biotype=protein_coding;locus_tag=SPD_0738
CP000410.2	Genbank	CDS	749947	750336	.	+	0	ID=cds-ABJ54413.1;Parent=gene-SPD_0738;Dbxref=NCBI_GP:ABJ54413.1;Name=ABJ54413.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0844%3B equivalent gene in S.pneumoniae R6 %3D spr0746%3B identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354;gbkey=CDS;gene=cdd-1;locus_tag=SPD_0738;product=cytidine deaminase;protein_id=ABJ54413.1;transl_table=11
CP000410.2	Genbank	gene	750426	751478	.	+	.	ID=gene-SPD_0739;Name=SPD_0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0739
CP000410.2	Genbank	CDS	750426	751478	.	+	0	ID=cds-ABJ55247.1;Parent=gene-SPD_0739;Dbxref=NCBI_GP:ABJ55247.1;Name=ABJ55247.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0845%3B equivalent gene in S.pneumoniae R6 %3D spr0747%3B identified by match to protein family HMM PF02608;gbkey=CDS;locus_tag=SPD_0739;product=putative membrane lipoprotein TmpC precursor;protein_id=ABJ55247.1;transl_table=11
CP000410.2	Genbank	gene	751622	753157	.	+	.	ID=gene-SPD_0740;Name=SPD_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0740
CP000410.2	Genbank	CDS	751622	753157	.	+	0	ID=cds-ABJ54150.1;Parent=gene-SPD_0740;Dbxref=NCBI_GP:ABJ54150.1;Name=ABJ54150.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0846%3B equivalent gene in S.pneumoniae R6 %3D spr0748%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0740;product=sugar ABC transporter%2C ATP-binding protein;protein_id=ABJ54150.1;transl_table=11
CP000410.2	Genbank	gene	753150	754208	.	+	.	ID=gene-SPD_0741;Name=SPD_0741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0741
CP000410.2	Genbank	CDS	753150	754208	.	+	0	ID=cds-ABJ53949.1;Parent=gene-SPD_0741;Dbxref=NCBI_GP:ABJ53949.1;Name=ABJ53949.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0847%3B equivalent gene in S.pneumoniae R6 %3D spr0749%3B identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=SPD_0741;product=sugar ABC transporter%2C permease protein%2C putative;protein_id=ABJ53949.1;transl_table=11
CP000410.2	Genbank	gene	754211	755167	.	+	.	ID=gene-SPD_0742;Name=SPD_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0742
CP000410.2	Genbank	CDS	754211	755167	.	+	0	ID=cds-ABJ54970.1;Parent=gene-SPD_0742;Dbxref=NCBI_GP:ABJ54970.1;Name=ABJ54970.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0848%3B equivalent gene in S.pneumoniae R6 %3D spr0750%3B identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=SPD_0742;product=sugar ABC transporter%2C permease protein%2C putative;protein_id=ABJ54970.1;transl_table=11
CP000410.2	Genbank	pseudogene	755252	755767	.	+	.	ID=gene-SPD_0743;Name=SPD_0743;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1596%3B equivalent gene in S.pneumoniae R6 %3D spr0751%3B IS3-Spn1%2C transposase%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0743;pseudo=true
CP000410.2	Genbank	pseudogene	755767	756599	.	+	.	ID=gene-SPD_0744;Name=SPD_0744;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr0753%3B IS3-Spn1%2C transposase%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0744;pseudo=true
CP000410.2	Genbank	gene	756642	757283	.	-	.	ID=gene-SPD_0745;Name=SPD_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0745
CP000410.2	Genbank	CDS	756642	757283	.	-	0	ID=cds-ABJ53933.1;Parent=gene-SPD_0745;Dbxref=NCBI_GP:ABJ53933.1;Name=ABJ53933.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0851%3B equivalent gene in S.pneumoniae R6 %3D spr0755%3B identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023;gbkey=CDS;locus_tag=SPD_0745;product=membrane protein%2C putative;protein_id=ABJ53933.1;transl_table=11
CP000410.2	Genbank	gene	757419	759362	.	+	.	ID=gene-SPD_0746;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=SPD_0746
CP000410.2	Genbank	CDS	757419	759362	.	+	0	ID=cds-ABJ54831.1;Parent=gene-SPD_0746;Dbxref=NCBI_GP:ABJ54831.1;Name=ABJ54831.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0852%3B equivalent gene in S.pneumoniae R6 %3D spr0756%3B identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01058;gbkey=CDS;gene=parE;locus_tag=SPD_0746;product=DNA topoisomerase IV%2C B subunit;protein_id=ABJ54831.1;transl_table=11
CP000410.2	Genbank	gene	759483	759608	.	+	.	ID=gene-SPD_0747;Name=SPD_0747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0747
CP000410.2	Genbank	CDS	759483	759608	.	+	0	ID=cds-ABJ54592.1;Parent=gene-SPD_0747;Dbxref=NCBI_GP:ABJ54592.1;Name=ABJ54592.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0854;gbkey=CDS;locus_tag=SPD_0747;product=hypothetical protein;protein_id=ABJ54592.1;transl_table=11
CP000410.2	Genbank	gene	759773	762253	.	+	.	ID=gene-SPD_0748;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=SPD_0748
CP000410.2	Genbank	CDS	759773	762253	.	+	0	ID=cds-ABJ53927.1;Parent=gene-SPD_0748;Dbxref=NCBI_GP:ABJ53927.1;Name=ABJ53927.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0855%3B equivalent gene in S.pneumoniae R6 %3D spr0757%3B identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01061;gbkey=CDS;gene=parC;locus_tag=SPD_0748;product=DNA topoisomerase IV%2C A subunit;protein_id=ABJ53927.1;transl_table=11
CP000410.2	Genbank	gene	762383	763405	.	+	.	ID=gene-SPD_0749;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=SPD_0749
CP000410.2	Genbank	CDS	762383	763405	.	+	0	ID=cds-ABJ54298.1;Parent=gene-SPD_0749;Dbxref=NCBI_GP:ABJ54298.1;Name=ABJ54298.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0856%3B equivalent gene in S.pneumoniae R6 %3D spr0758%3B identified by match to protein family HMM PF01063%3B match to protein family HMM TIGR01123;gbkey=CDS;gene=ilvE;locus_tag=SPD_0749;product=branched-chain amino acid aminotransferase;protein_id=ABJ54298.1;transl_table=11
CP000410.2	Genbank	gene	763461	764165	.	+	.	ID=gene-SPD_0750;Name=SPD_0750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0750
CP000410.2	Genbank	CDS	763461	764165	.	+	0	ID=cds-ABJ54006.1;Parent=gene-SPD_0750;Dbxref=NCBI_GP:ABJ54006.1;Name=ABJ54006.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0759;gbkey=CDS;locus_tag=SPD_0750;product=hypothetical protein;protein_id=ABJ54006.1;transl_table=11
CP000410.2	Genbank	gene	764230	764919	.	+	.	ID=gene-SPD_0751;Name=SPD_0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0751
CP000410.2	Genbank	CDS	764230	764919	.	+	0	ID=cds-ABJ54562.1;Parent=gene-SPD_0751;Dbxref=NCBI_GP:ABJ54562.1;Name=ABJ54562.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0858%3B equivalent gene in S.pneumoniae R6 %3D spr0760%3B identified by match to protein family HMM PF06149;gbkey=CDS;locus_tag=SPD_0751;product=membrane protein%2C putative;protein_id=ABJ54562.1;transl_table=11
CP000410.2	Genbank	gene	764916	765839	.	+	.	ID=gene-SPD_0752;Name=SPD_0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0752
CP000410.2	Genbank	CDS	764916	765839	.	+	0	ID=cds-ABJ55395.1;Parent=gene-SPD_0752;Dbxref=NCBI_GP:ABJ55395.1;Name=ABJ55395.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0859%3B equivalent gene in S.pneumoniae R6 %3D spr0761%3B identified by match to protein family HMM PF06166;gbkey=CDS;locus_tag=SPD_0752;product=membrane protein%2C putative;protein_id=ABJ55395.1;transl_table=11
CP000410.2	Genbank	gene	765854	766498	.	+	.	ID=gene-SPD_0753;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=SPD_0753
CP000410.2	Genbank	CDS	765854	766498	.	+	0	ID=cds-ABJ53760.1;Parent=gene-SPD_0753;Dbxref=NCBI_GP:ABJ53760.1;Name=ABJ53760.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0860%3B equivalent gene in S.pneumoniae R6 %3D spr0762%3B identified by match to protein family HMM PF01470%3B match to protein family HMM TIGR00504;gbkey=CDS;gene=pcp;locus_tag=SPD_0753;product=pyrrolidone-carboxylate peptidase;protein_id=ABJ53760.1;transl_table=11
CP000410.2	Genbank	gene	766666	766896	.	+	.	ID=gene-SPD_0754;Name=SPD_0754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0754
CP000410.2	Genbank	CDS	766666	766896	.	+	0	ID=cds-ABJ54609.1;Parent=gene-SPD_0754;Dbxref=NCBI_GP:ABJ54609.1;Name=ABJ54609.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0861%3B equivalent gene in S.pneumoniae R6 %3D spr0763;gbkey=CDS;locus_tag=SPD_0754;product=hypothetical protein;protein_id=ABJ54609.1;transl_table=11
CP000410.2	Genbank	gene	766946	767026	.	+	.	ID=gene-SPD_0755;Name=SPD_0755;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0755
CP000410.2	Genbank	tRNA	766946	767026	.	+	.	ID=rna-SPD_0755;Parent=gene-SPD_0755;gbkey=tRNA;locus_tag=SPD_0755;product=tRNA-Tyr
CP000410.2	Genbank	exon	766946	767026	.	+	.	ID=exon-SPD_0755-1;Parent=rna-SPD_0755;gbkey=tRNA;locus_tag=SPD_0755;product=tRNA-Tyr
CP000410.2	Genbank	gene	767036	767107	.	+	.	ID=gene-SPD_0756;Name=SPD_0756;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0756
CP000410.2	Genbank	tRNA	767036	767107	.	+	.	ID=rna-SPD_0756;Parent=gene-SPD_0756;gbkey=tRNA;locus_tag=SPD_0756;product=tRNA-Gln
CP000410.2	Genbank	exon	767036	767107	.	+	.	ID=exon-SPD_0756-1;Parent=rna-SPD_0756;gbkey=tRNA;locus_tag=SPD_0756;product=tRNA-Gln
CP000410.2	Genbank	gene	767269	768471	.	+	.	ID=gene-SPD_0757;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SPD_0757
CP000410.2	Genbank	CDS	767269	768471	.	+	0	ID=cds-ABJ53821.1;Parent=gene-SPD_0757;Dbxref=NCBI_GP:ABJ53821.1;Name=ABJ53821.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0862%3B equivalent gene in S.pneumoniae R6 %3D spr0764%3B identified by match to protein family HMM PF00575;gbkey=CDS;gene=rpsA;locus_tag=SPD_0757;product=ribosomal protein S1;protein_id=ABJ53821.1;transl_table=11
CP000410.2	Genbank	pseudogene	768606	769933	.	-	.	ID=gene-SPD_0758;Name=SPD_0758;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1582%3B equivalent gene in S.pneumoniae R6 %3D spr0767%3B IS1167%2C transposase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0758;pseudo=true
CP000410.2	Genbank	gene	770127	770624	.	+	.	ID=gene-SPD_0759;Name=SPD_0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0759
CP000410.2	Genbank	CDS	770127	770624	.	+	0	ID=cds-ABJ53935.1;Parent=gene-SPD_0759;Dbxref=NCBI_GP:ABJ53935.1;Name=ABJ53935.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0864%3B equivalent gene in S.pneumoniae R6 %3D spr0768;gbkey=CDS;locus_tag=SPD_0759;product=hypothetical protein;protein_id=ABJ53935.1;transl_table=11
CP000410.2	Genbank	gene	770624	772279	.	+	.	ID=gene-SPD_0760;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=SPD_0760
CP000410.2	Genbank	CDS	770624	772279	.	+	0	ID=cds-ABJ54755.1;Parent=gene-SPD_0760;Dbxref=NCBI_GP:ABJ54755.1;Name=ABJ54755.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0865%3B equivalent gene in S.pneumoniae R6 %3D spr0769%3B identified by match to protein family HMM PF00004%3B match to protein family HMM TIGR02397;gbkey=CDS;gene=dnaX;locus_tag=SPD_0760;product=DNA polymerase III%2C gamma and tau subunits;protein_id=ABJ54755.1;transl_table=11
CP000410.2	Genbank	gene	772307	772501	.	+	.	ID=gene-SPD_0761;Name=SPD_0761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0761
CP000410.2	Genbank	CDS	772307	772501	.	+	0	ID=cds-ABJ53677.1;Parent=gene-SPD_0761;Dbxref=NCBI_GP:ABJ53677.1;Name=ABJ53677.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0866%3B equivalent gene in S.pneumoniae R6 %3D spr0770;gbkey=CDS;locus_tag=SPD_0761;product=hypothetical protein;protein_id=ABJ53677.1;transl_table=11
CP000410.2	Genbank	gene	772651	773421	.	+	.	ID=gene-SPD_0762;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=SPD_0762
CP000410.2	Genbank	CDS	772651	773421	.	+	0	ID=cds-ABJ55504.1;Parent=gene-SPD_0762;Dbxref=NCBI_GP:ABJ55504.1;Name=ABJ55504.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0867%3B equivalent gene in S.pneumoniae R6 %3D spr0771%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978;gbkey=CDS;gene=sufC;locus_tag=SPD_0762;product=FeS assembly ATPase SufC;protein_id=ABJ55504.1;transl_table=11
CP000410.2	Genbank	gene	773449	774711	.	+	.	ID=gene-SPD_0763;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=SPD_0763
CP000410.2	Genbank	CDS	773449	774711	.	+	0	ID=cds-ABJ54405.1;Parent=gene-SPD_0763;Dbxref=NCBI_GP:ABJ54405.1;Name=ABJ54405.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0868%3B equivalent gene in S.pneumoniae R6 %3D spr0772%3B identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01981;gbkey=CDS;gene=sufD;locus_tag=SPD_0763;product=FeS assembly protein SufD;protein_id=ABJ54405.1;transl_table=11
CP000410.2	Genbank	gene	774722	775948	.	+	.	ID=gene-SPD_0764;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=SPD_0764
CP000410.2	Genbank	CDS	774722	775948	.	+	0	ID=cds-ABJ55248.1;Parent=gene-SPD_0764;Dbxref=NCBI_GP:ABJ55248.1;Name=ABJ55248.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0869%3B equivalent gene in S.pneumoniae R6 %3D spr0773%3B identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01979;gbkey=CDS;gene=sufS;locus_tag=SPD_0764;product=cysteine desulfurase%2C SufS subfamily protein;protein_id=ABJ55248.1;transl_table=11
CP000410.2	Genbank	gene	775935	776375	.	+	.	ID=gene-SPD_0765;Name=SPD_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0765
CP000410.2	Genbank	CDS	775935	776375	.	+	0	ID=cds-ABJ54975.1;Parent=gene-SPD_0765;Dbxref=NCBI_GP:ABJ54975.1;Name=ABJ54975.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0870%3B equivalent gene in S.pneumoniae R6 %3D spr0774%3B identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01994;gbkey=CDS;locus_tag=SPD_0765;product=SUF system FeS assembly protein%2C NifU family protein;protein_id=ABJ54975.1;transl_table=11
CP000410.2	Genbank	gene	776429	777841	.	+	.	ID=gene-SPD_0766;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=SPD_0766
CP000410.2	Genbank	CDS	776429	777841	.	+	0	ID=cds-ABJ53970.1;Parent=gene-SPD_0766;Dbxref=NCBI_GP:ABJ53970.1;Name=ABJ53970.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0871%3B equivalent gene in S.pneumoniae R6 %3D spr0775%3B identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980;gbkey=CDS;gene=sufB;locus_tag=SPD_0766;product=FeS assembly protein SufB;protein_id=ABJ53970.1;transl_table=11
CP000410.2	Genbank	gene	778040	779281	.	-	.	ID=gene-SPD_0767;Name=dacC;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=SPD_0767
CP000410.2	Genbank	CDS	778040	779281	.	-	0	ID=cds-ABJ54802.1;Parent=gene-SPD_0767;Dbxref=NCBI_GP:ABJ54802.1;Name=ABJ54802.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0872%3B equivalent gene in S.pneumoniae R6 %3D spr0776%3B identified by match to protein family HMM PF00768%3B match to protein family HMM PF07943;gbkey=CDS;gene=dacC;locus_tag=SPD_0767;product=penicillin-binding protein 3/D-alanyl-D-alanine carboxypeptidase;protein_id=ABJ54802.1;transl_table=11
CP000410.2	Genbank	gene	779384	780493	.	+	.	ID=gene-SPD_0768;Name=SPD_0768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0768
CP000410.2	Genbank	CDS	779384	780493	.	+	0	ID=cds-ABJ54421.1;Parent=gene-SPD_0768;Dbxref=NCBI_GP:ABJ54421.1;Name=ABJ54421.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0873%3B equivalent gene in S.pneumoniae R6 %3D spr0777%3B identified by match to protein family HMM PF01594;gbkey=CDS;locus_tag=SPD_0768;product=membrane protein%2C putative;protein_id=ABJ54421.1;transl_table=11
CP000410.2	Genbank	gene	781139	781483	.	+	.	ID=gene-SPD_0769;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=SPD_0769
CP000410.2	Genbank	tmRNA	781139	781483	.	+	.	ID=rna-SPD_0769;Parent=gene-SPD_0769;gbkey=tmRNA;gene=ssrA;locus_tag=SPD_0769
CP000410.2	Genbank	exon	781139	781483	.	+	.	ID=exon-SPD_0769-1;Parent=rna-SPD_0769;gbkey=tmRNA;gene=ssrA;locus_tag=SPD_0769
CP000410.2	Genbank	gene	781669	781756	.	-	.	ID=gene-SPD_0770;Name=SPD_0770;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0770
CP000410.2	Genbank	tRNA	781669	781756	.	-	.	ID=rna-SPD_0770;Parent=gene-SPD_0770;gbkey=tRNA;locus_tag=SPD_0770;product=tRNA-Ser
CP000410.2	Genbank	exon	781669	781756	.	-	.	ID=exon-SPD_0770-1;Parent=rna-SPD_0770;gbkey=tRNA;locus_tag=SPD_0770;product=tRNA-Ser
CP000410.2	Genbank	gene	781918	782658	.	+	.	ID=gene-SPD_0771;Name=lacR1;gbkey=Gene;gene=lacR1;gene_biotype=protein_coding;locus_tag=SPD_0771
CP000410.2	Genbank	CDS	781918	782658	.	+	0	ID=cds-ABJ53861.1;Parent=gene-SPD_0771;Dbxref=NCBI_GP:ABJ53861.1;Name=ABJ53861.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0875%3B equivalent gene in S.pneumoniae R6 %3D spr0778%3B identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;gene=lacR1;locus_tag=SPD_0771;product=lactose phosphotransferase system repressor;protein_id=ABJ53861.1;transl_table=11
CP000410.2	Genbank	gene	782655	783566	.	+	.	ID=gene-SPD_0772;Name=SPD_0772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0772
CP000410.2	Genbank	CDS	782655	783566	.	+	0	ID=cds-ABJ55168.1;Parent=gene-SPD_0772;Dbxref=NCBI_GP:ABJ55168.1;Name=ABJ55168.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0876%3B equivalent gene in S.pneumoniae R6 %3D spr0779%3B identified by match to protein family HMM PF00294;gbkey=CDS;locus_tag=SPD_0772;product=1-phosphofructokinase%2C putative;protein_id=ABJ55168.1;transl_table=11
CP000410.2	Genbank	gene	783563	785515	.	+	.	ID=gene-SPD_0773;Name=SPD_0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0773
CP000410.2	Genbank	CDS	783563	785515	.	+	0	ID=cds-ABJ54517.1;Parent=gene-SPD_0773;Dbxref=NCBI_GP:ABJ54517.1;Name=ABJ54517.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0877%3B equivalent gene in S.pneumoniae R6 %3D spr0780%3B identified by match to protein family HMM PF00359%3B match to protein family HMM PF02378%3B match to protein family HMM PF02379%3B match to protein family HMM TIGR00829%3B match to protein family HMM TIGR00848%3B match to protein family HMM TIGR01427;gbkey=CDS;locus_tag=SPD_0773;product=PTS system%2C fructose specific IIABC components;protein_id=ABJ54517.1;transl_table=11
CP000410.2	Genbank	gene	785601	787904	.	+	.	ID=gene-SPD_0774;Name=SPD_0774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0774
CP000410.2	Genbank	CDS	785601	787904	.	+	0	ID=cds-ABJ55312.1;Parent=gene-SPD_0774;Dbxref=NCBI_GP:ABJ55312.1;Name=ABJ55312.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0878%3B equivalent gene in S.pneumoniae R6 %3D spr0781%3B identified by match to protein family HMM PF01580;gbkey=CDS;locus_tag=SPD_0774;product=SpoE family protein;protein_id=ABJ55312.1;transl_table=11
CP000410.2	Genbank	gene	787949	788482	.	-	.	ID=gene-SPD_0775;Name=SPD_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0775
CP000410.2	Genbank	CDS	787949	788482	.	-	0	ID=cds-ABJ54805.1;Parent=gene-SPD_0775;Dbxref=NCBI_GP:ABJ54805.1;Name=ABJ54805.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0879%3B equivalent gene in S.pneumoniae R6 %3D spr0782;gbkey=CDS;locus_tag=SPD_0775;product=hypothetical protein;protein_id=ABJ54805.1;transl_table=11
CP000410.2	Genbank	gene	788515	789657	.	+	.	ID=gene-SPD_0776;Name=SPD_0776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0776
CP000410.2	Genbank	CDS	788515	789657	.	+	0	ID=cds-ABJ53702.1;Parent=gene-SPD_0776;Dbxref=NCBI_GP:ABJ53702.1;Name=ABJ53702.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0880%3B equivalent gene in S.pneumoniae R6 %3D spr0783%3B identified by match to protein family HMM PF00266;gbkey=CDS;locus_tag=SPD_0776;product=aminotransferase%2C class V;protein_id=ABJ53702.1;transl_table=11
CP000410.2	Genbank	gene	789666	790880	.	+	.	ID=gene-SPD_0777;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=SPD_0777
CP000410.2	Genbank	CDS	789666	790880	.	+	0	ID=cds-ABJ54955.1;Parent=gene-SPD_0777;Dbxref=NCBI_GP:ABJ54955.1;Name=ABJ54955.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0881%3B equivalent gene in S.pneumoniae R6 %3D spr0784%3B identified by match to protein family HMM PF02568%3B match to protein family HMM PF02926%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00342;gbkey=CDS;gene=thiI;locus_tag=SPD_0777;product=thiamine biosynthesis/tRNA modification protein ThiI;protein_id=ABJ54955.1;transl_table=11
CP000410.2	Genbank	gene	791015	791839	.	+	.	ID=gene-SPD_0778;Name=SPD_0778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0778
CP000410.2	Genbank	CDS	791015	791839	.	+	0	ID=cds-ABJ53850.1;Parent=gene-SPD_0778;Dbxref=NCBI_GP:ABJ53850.1;Name=ABJ53850.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0882%3B equivalent gene in S.pneumoniae R6 %3D spr0785%3B identified by match to protein family HMM PF00756;gbkey=CDS;locus_tag=SPD_0778;product=hypothetical protein;protein_id=ABJ53850.1;transl_table=11
CP000410.2	Genbank	gene	791861	792196	.	+	.	ID=gene-SPD_0779;Name=SPD_0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0779
CP000410.2	Genbank	CDS	791861	792196	.	+	0	ID=cds-ABJ55323.1;Parent=gene-SPD_0779;Dbxref=NCBI_GP:ABJ55323.1;Name=ABJ55323.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0883%3B equivalent gene in S.pneumoniae R6 %3D spr0786;gbkey=CDS;locus_tag=SPD_0779;product=hypothetical protein;protein_id=ABJ55323.1;transl_table=11
CP000410.2	Genbank	gene	792196	792600	.	+	.	ID=gene-SPD_0780;Name=SPD_0780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0780
CP000410.2	Genbank	CDS	792196	792600	.	+	0	ID=cds-ABJ54542.1;Parent=gene-SPD_0780;Dbxref=NCBI_GP:ABJ54542.1;Name=ABJ54542.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0884%3B equivalent gene in S.pneumoniae R6 %3D spr0788;gbkey=CDS;locus_tag=SPD_0780;product=hypothetical protein;protein_id=ABJ54542.1;transl_table=11
CP000410.2	Genbank	gene	792613	793779	.	+	.	ID=gene-SPD_0781;Name=SPD_0781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0781
CP000410.2	Genbank	CDS	792613	793779	.	+	0	ID=cds-ABJ55356.1;Parent=gene-SPD_0781;Dbxref=NCBI_GP:ABJ55356.1;Name=ABJ55356.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0885%3B equivalent gene in S.pneumoniae R6 %3D spr0789;gbkey=CDS;locus_tag=SPD_0781;product=hypothetical protein;protein_id=ABJ55356.1;transl_table=11
CP000410.2	Genbank	gene	794287	795780	.	+	.	ID=gene-SPD_0782;Name=SPD_0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0782
CP000410.2	Genbank	CDS	794287	795780	.	+	0	ID=cds-ABJ54168.1;Parent=gene-SPD_0782;Dbxref=NCBI_GP:ABJ54168.1;Name=ABJ54168.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0886%3B equivalent gene in S.pneumoniae R6 %3D spr0790%3B identified by match to protein family HMM PF02384;gbkey=CDS;locus_tag=SPD_0782;product=type I restriction-modification system%2C M subunit%2C putative;protein_id=ABJ54168.1;transl_table=11
CP000410.2	Genbank	gene	795793	796404	.	+	.	ID=gene-SPD_0783;Name=SPD_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0783
CP000410.2	Genbank	CDS	795793	796404	.	+	0	ID=cds-ABJ53638.1;Parent=gene-SPD_0783;Dbxref=NCBI_GP:ABJ53638.1;Name=ABJ53638.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0887%3B equivalent gene in S.pneumoniae R6 %3D spr0791%3B identified by match to protein family HMM PF01420;gbkey=CDS;locus_tag=SPD_0783;product=type I restriction-modification system%2C S subunit%2C putative;protein_id=ABJ53638.1;transl_table=11
CP000410.2	Genbank	gene	796483	799833	.	+	.	ID=gene-SPD_0784;Name=SPD_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0784
CP000410.2	Genbank	CDS	796483	799833	.	+	0	ID=cds-ABJ54398.1;Parent=gene-SPD_0784;Dbxref=NCBI_GP:ABJ54398.1;Name=ABJ54398.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0892%3B equivalent gene in S.pneumoniae R6 %3D spr0792%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851;gbkey=CDS;locus_tag=SPD_0784;product=type I restriction-modification system%2C R subunit%2C putative;protein_id=ABJ54398.1;transl_table=11
CP000410.2	Genbank	gene	800104	800304	.	+	.	ID=gene-SPD_0785;Name=SPD_0785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0785
CP000410.2	Genbank	CDS	800104	800304	.	+	0	ID=cds-ABJ53963.1;Parent=gene-SPD_0785;Dbxref=NCBI_GP:ABJ53963.1;Name=ABJ53963.1;gbkey=CDS;locus_tag=SPD_0785;product=hypothetical protein;protein_id=ABJ53963.1;transl_table=11
CP000410.2	Genbank	gene	800419	800889	.	-	.	ID=gene-SPD_0786;Name=SPD_0786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0786
CP000410.2	Genbank	CDS	800419	800889	.	-	0	ID=cds-ABJ54869.1;Parent=gene-SPD_0786;Dbxref=NCBI_GP:ABJ54869.1;Name=ABJ54869.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0893%3B equivalent gene in S.pneumoniae R6 %3D spr0793%3B identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863;gbkey=CDS;locus_tag=SPD_0786;product=transcriptional regulator of arginine metabolism expression%2C putative;protein_id=ABJ54869.1;transl_table=11
CP000410.2	Genbank	gene	800906	803179	.	-	.	ID=gene-SPD_0787;Name=pepX;gbkey=Gene;gene=pepX;gene_biotype=protein_coding;locus_tag=SPD_0787
CP000410.2	Genbank	CDS	800906	803179	.	-	0	ID=cds-ABJ54320.1;Parent=gene-SPD_0787;Dbxref=NCBI_GP:ABJ54320.1;Name=ABJ54320.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0894%3B equivalent gene in S.pneumoniae R6 %3D spr0794%3B identified by match to protein family HMM PF02129;gbkey=CDS;gene=pepX;locus_tag=SPD_0787;product=Xaa-Pro dipeptidyl-peptidase PepX;protein_id=ABJ54320.1;transl_table=11
CP000410.2	Genbank	gene	803525	806626	.	+	.	ID=gene-SPD_0788;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SPD_0788
CP000410.2	Genbank	CDS	803525	806626	.	+	0	ID=cds-ABJ55140.1;Parent=gene-SPD_0788;Dbxref=NCBI_GP:ABJ55140.1;Name=ABJ55140.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0895%3B equivalent gene in S.pneumoniae R6 %3D spr0795%3B identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;gene=dnaE;locus_tag=SPD_0788;product=DNA polymerase III%2C alpha subunit;protein_id=ABJ55140.1;transl_table=11
CP000410.2	Genbank	gene	806709	807716	.	+	.	ID=gene-SPD_0789;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=SPD_0789
CP000410.2	Genbank	CDS	806709	807716	.	+	0	ID=cds-ABJ54293.1;Parent=gene-SPD_0789;Dbxref=NCBI_GP:ABJ54293.1;Name=ABJ54293.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0896%3B equivalent gene in S.pneumoniae R6 %3D spr0796%3B identified by match to protein family HMM PF00365%3B match to protein family HMM TIGR02482;gbkey=CDS;gene=pfkA;locus_tag=SPD_0789;product=6-phosphofructokinase;protein_id=ABJ54293.1;transl_table=11
CP000410.2	Genbank	gene	807775	809280	.	+	.	ID=gene-SPD_0790;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=SPD_0790
CP000410.2	Genbank	CDS	807775	809280	.	+	0	ID=cds-ABJ55166.1;Parent=gene-SPD_0790;Dbxref=NCBI_GP:ABJ55166.1;Name=ABJ55166.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0897%3B equivalent gene in S.pneumoniae R6 %3D spr0797%3B identified by match to protein family HMM PF00224%3B match to protein family HMM PF02887%3B match to protein family HMM PF03328%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk;locus_tag=SPD_0790;product=pyruvate kinase;protein_id=ABJ55166.1;transl_table=11
CP000410.2	Genbank	gene	810397	810651	.	-	.	ID=gene-SPD_0791;Name=SPD_0791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0791
CP000410.2	Genbank	CDS	810397	810651	.	-	0	ID=cds-ABJ53818.1;Parent=gene-SPD_0791;Dbxref=NCBI_GP:ABJ53818.1;Name=ABJ53818.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0798;gbkey=CDS;locus_tag=SPD_0791;product=hypothetical protein;protein_id=ABJ53818.1;transl_table=11
CP000410.2	Genbank	gene	811087	811959	.	+	.	ID=gene-SPD_0792;Name=SPD_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0792
CP000410.2	Genbank	CDS	811087	811959	.	+	0	ID=cds-ABJ54401.1;Parent=gene-SPD_0792;Dbxref=NCBI_GP:ABJ54401.1;Name=ABJ54401.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0899%3B equivalent gene in S.pneumoniae R6 %3D spr0799;gbkey=CDS;locus_tag=SPD_0792;product=lipoprotein%2C putative;protein_id=ABJ54401.1;transl_table=11
CP000410.2	Genbank	gene	811972	812136	.	+	.	ID=gene-SPD_0793;Name=SPD_0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0793
CP000410.2	Genbank	CDS	811972	812136	.	+	0	ID=cds-ABJ53974.1;Parent=gene-SPD_0793;Dbxref=NCBI_GP:ABJ53974.1;Name=ABJ53974.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0800;gbkey=CDS;locus_tag=SPD_0793;product=hypothetical protein;protein_id=ABJ53974.1;transl_table=11
CP000410.2	Genbank	pseudogene	812261	812449	.	-	.	ID=gene-SPD_0794;Name=SPD_0794;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1310%3B equivalent gene in S.pneumoniae R6 %3D spr0801%3B IS1381%2C transposase OrfA%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0794;pseudo=true
CP000410.2	Genbank	gene	812592	812903	.	+	.	ID=gene-SPD_0795;Name=SPD_0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0795
CP000410.2	Genbank	CDS	812592	812903	.	+	0	ID=cds-ABJ54379.1;Parent=gene-SPD_0795;Dbxref=NCBI_GP:ABJ54379.1;Name=ABJ54379.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0901%3B equivalent gene in S.pneumoniae R6 %3D spr0802;gbkey=CDS;locus_tag=SPD_0795;product=hypothetical protein;protein_id=ABJ54379.1;transl_table=11
CP000410.2	Genbank	gene	812907	813623	.	+	.	ID=gene-SPD_0796;Name=SPD_0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0796
CP000410.2	Genbank	CDS	812907	813623	.	+	0	ID=cds-ABJ55466.1;Parent=gene-SPD_0796;Dbxref=NCBI_GP:ABJ55466.1;Name=ABJ55466.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0803;gbkey=CDS;locus_tag=SPD_0796;product=hypothetical protein;protein_id=ABJ55466.1;transl_table=11
CP000410.2	Genbank	gene	813753	814568	.	-	.	ID=gene-SPD_0797;Name=SPD_0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0797
CP000410.2	Genbank	CDS	813753	814568	.	-	0	ID=cds-ABJ55045.1;Parent=gene-SPD_0797;Dbxref=NCBI_GP:ABJ55045.1;Name=ABJ55045.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0904%3B equivalent gene in S.pneumoniae R6 %3D spr0804;gbkey=CDS;locus_tag=SPD_0797;product=hypothetical protein;protein_id=ABJ55045.1;transl_table=11
CP000410.2	Genbank	gene	814565	815470	.	-	.	ID=gene-SPD_0798;Name=SPD_0798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0798
CP000410.2	Genbank	CDS	814565	815470	.	-	0	ID=cds-ABJ55124.1;Parent=gene-SPD_0798;Dbxref=NCBI_GP:ABJ55124.1;Name=ABJ55124.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0905%3B equivalent gene in S.pneumoniae R6 %3D spr0805%3B identified by match to protein family HMM PF03773;gbkey=CDS;locus_tag=SPD_0798;product=membrnae protein%2C putative;protein_id=ABJ55124.1;transl_table=11
CP000410.2	Genbank	gene	815471	815602	.	-	.	ID=gene-SPD_0799;Name=SPD_0799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0799
CP000410.2	Genbank	CDS	815471	815602	.	-	0	ID=cds-ABJ53798.1;Parent=gene-SPD_0799;Dbxref=NCBI_GP:ABJ53798.1;Name=ABJ53798.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0906;gbkey=CDS;locus_tag=SPD_0799;product=hypothetical protein;protein_id=ABJ53798.1;transl_table=11
CP000410.2	Genbank	gene	815812	816171	.	+	.	ID=gene-SPD_0800;Name=SPD_0800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0800
CP000410.2	Genbank	CDS	815812	816171	.	+	0	ID=cds-ABJ54637.1;Parent=gene-SPD_0800;Dbxref=NCBI_GP:ABJ54637.1;Name=ABJ54637.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0907%3B equivalent gene in S.pneumoniae R6 %3D spr0806 The TIGR4 equivalent gene has 130 more amino acids than the D39 or R6 genes.;gbkey=CDS;locus_tag=SPD_0800;product=capsular polysaccharide biosynthesis protein%2C putative;protein_id=ABJ54637.1;transl_table=11
CP000410.2	Genbank	gene	816134	817180	.	+	.	ID=gene-SPD_0801;Name=SPD_0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0801
CP000410.2	Genbank	CDS	816134	817180	.	+	0	ID=cds-ABJ55470.1;Parent=gene-SPD_0801;Dbxref=NCBI_GP:ABJ55470.1;Name=ABJ55470.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0907%3B equivalent gene in S.pneumoniae R6 %3D spr0807;gbkey=CDS;locus_tag=SPD_0801;product=hypothetical protein;protein_id=ABJ55470.1;transl_table=11
CP000410.2	Genbank	gene	817282	819411	.	+	.	ID=gene-SPD_0802;Name=SPD_0802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0802
CP000410.2	Genbank	CDS	817282	819411	.	+	0	ID=cds-ABJ54377.1;Parent=gene-SPD_0802;Dbxref=NCBI_GP:ABJ54377.1;Name=ABJ54377.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0908%3B equivalent gene in S.pneumoniae R6 %3D spr0808%3B identified by match to protein family HMM PF00575;gbkey=CDS;locus_tag=SPD_0802;product=S1 RNA binding domain;protein_id=ABJ54377.1;transl_table=11
CP000410.2	Genbank	gene	819906	820178	.	+	.	ID=gene-SPD_0803;Name=SPD_0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0803
CP000410.2	Genbank	CDS	819906	820178	.	+	0	ID=cds-ABJ55203.1;Parent=gene-SPD_0803;Dbxref=NCBI_GP:ABJ55203.1;Name=ABJ55203.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0910%3B equivalent gene in S.pneumoniae R6 %3D spr0810%3B identified by match to protein family HMM PF04024;gbkey=CDS;locus_tag=SPD_0803;product=hypothetical protein;protein_id=ABJ55203.1;transl_table=11
CP000410.2	Genbank	gene	821151	821909	.	+	.	ID=gene-SPD_0804;Name=SPD_0804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0804
CP000410.2	Genbank	CDS	821151	821909	.	+	0	ID=cds-ABJ54040.1;Parent=gene-SPD_0804;Dbxref=NCBI_GP:ABJ54040.1;Name=ABJ54040.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0912%3B equivalent gene in S.pneumoniae R6 %3D spr0812%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0804;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54040.1;transl_table=11
CP000410.2	Genbank	gene	821911	823899	.	+	.	ID=gene-SPD_0805;Name=SPD_0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0805
CP000410.2	Genbank	CDS	821911	823899	.	+	0	ID=cds-ABJ54541.1;Parent=gene-SPD_0805;Dbxref=NCBI_GP:ABJ54541.1;Name=ABJ54541.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0913%3B equivalent gene in S.pneumoniae R6 %3D spr0813%3B identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=SPD_0805;product=transporter%2C permease protein%2C putative;protein_id=ABJ54541.1;transl_table=11
CP000410.2	Genbank	gene	823942	824532	.	-	.	ID=gene-SPD_0806;Name=SPD_0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0806
CP000410.2	Genbank	CDS	823942	824532	.	-	0	ID=cds-ABJ53676.1;Parent=gene-SPD_0806;Dbxref=NCBI_GP:ABJ53676.1;Name=ABJ53676.1;Note=Gene encodes 3 transmembrane regions. equivalent gene in S.pneumoniae TIGR4 %3D SP0914%3B equivalent gene in S.pneumoniae R6 spr0814%3B identified by match to protein family HMM PF01988;gbkey=CDS;locus_tag=SPD_0806;product=hypothetical protein;protein_id=ABJ53676.1;transl_table=11
CP000410.2	Genbank	gene	824612	825487	.	-	.	ID=gene-SPD_0807;Name=SPD_0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0807
CP000410.2	Genbank	CDS	824612	825487	.	-	0	ID=cds-ABJ54730.1;Parent=gene-SPD_0807;Dbxref=NCBI_GP:ABJ54730.1;Name=ABJ54730.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0915%3B equivalent gene in S.pneumoniae R6 %3D spr0815%3B identified by match to protein family HMM PF00665;gbkey=CDS;locus_tag=SPD_0807;product=IS1239%2C transposase%2C putative;protein_id=ABJ54730.1;transl_table=11
CP000410.2	Genbank	gene	825720	825833	.	-	.	ID=gene-SPD_0808;Name=SPD_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0808
CP000410.2	Genbank	CDS	825720	825833	.	-	0	ID=cds-ABJ53739.1;Parent=gene-SPD_0808;Dbxref=NCBI_GP:ABJ53739.1;Name=ABJ53739.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_0808;product=hypothetical protein;protein_id=ABJ53739.1;transl_table=11
CP000410.2	Genbank	gene	826194	827669	.	+	.	ID=gene-SPD_0809;Name=cad;gbkey=Gene;gene=cad;gene_biotype=protein_coding;locus_tag=SPD_0809
CP000410.2	Genbank	CDS	826194	827669	.	+	0	ID=cds-ABJ55263.1;Parent=gene-SPD_0809;Dbxref=NCBI_GP:ABJ55263.1;Name=ABJ55263.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0916%3B equivalent gene in S.pneumoniae R6 %3D spr0816%3B identified by match to protein family HMM PF00266%3B match to protein family HMM PF01212%3B match to protein family HMM PF01276%3B match to protein family HMM PF03711;gbkey=CDS;gene=cad;locus_tag=SPD_0809;product=lysine decarboxylase;protein_id=ABJ55263.1;transl_table=11
CP000410.2	Genbank	pseudogene	827823	828350	.	-	.	ID=gene-SPD_0810;Name=SPD_0810;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0917%3B equivalent gene in S.pneumoniae R6 %3D spr0818%3B pilin inverting-related protein%3B authentic frameshift mutation that leads to divergence after amino acid 141;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0810;pseudo=true
CP000410.2	Genbank	gene	828606	829466	.	+	.	ID=gene-SPD_0811;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=SPD_0811
CP000410.2	Genbank	CDS	828606	829466	.	+	0	ID=cds-ABJ54021.1;Parent=gene-SPD_0811;Dbxref=NCBI_GP:ABJ54021.1;Name=ABJ54021.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0918%3B equivalent gene in S.pneumoniae R6 %3D spr0819%3B identified by match to protein family HMM PF01564%3B match to protein family HMM TIGR00417;gbkey=CDS;gene=speE;locus_tag=SPD_0811;product=spermidine synthase;protein_id=ABJ54021.1;transl_table=11
CP000410.2	Genbank	gene	829463	830722	.	+	.	ID=gene-SPD_0812;Name=lys1;gbkey=Gene;gene=lys1;gene_biotype=protein_coding;locus_tag=SPD_0812
CP000410.2	Genbank	CDS	829463	830722	.	+	0	ID=cds-ABJ55062.1;Parent=gene-SPD_0812;Dbxref=NCBI_GP:ABJ55062.1;Name=ABJ55062.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0919%3B equivalent gene in S.pneumoniae R6 %3D spr0820%3B identified by match to protein family HMM PF03435;gbkey=CDS;gene=lys1;locus_tag=SPD_0812;product=saccharopine dehydrogenase;protein_id=ABJ55062.1;transl_table=11
CP000410.2	Genbank	gene	830722	831849	.	+	.	ID=gene-SPD_0813;Name=nspC;gbkey=Gene;gene=nspC;gene_biotype=protein_coding;locus_tag=SPD_0813
CP000410.2	Genbank	CDS	830722	831849	.	+	0	ID=cds-ABJ53691.1;Parent=gene-SPD_0813;Dbxref=NCBI_GP:ABJ53691.1;Name=ABJ53691.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0920%3B equivalent gene in S.pneumoniae R6 %3D spr0821%3B identified by match to protein family HMM PF00278%3B match to protein family HMM TIGR01047;gbkey=CDS;gene=nspC;locus_tag=SPD_0813;product=carboxynorspermidine decarboxylase;protein_id=ABJ53691.1;transl_table=11
CP000410.2	Genbank	gene	831846	832931	.	+	.	ID=gene-SPD_0814;Name=SPD_0814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0814
CP000410.2	Genbank	CDS	831846	832931	.	+	0	ID=cds-ABJ54341.1;Parent=gene-SPD_0814;Dbxref=NCBI_GP:ABJ54341.1;Name=ABJ54341.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0921%3B equivalent gene in S.pneumoniae R6 %3D spr0822%3B identified by match to protein family HMM PF04371;gbkey=CDS;locus_tag=SPD_0814;product=agmatine deiminase;protein_id=ABJ54341.1;transl_table=11
CP000410.2	Genbank	gene	832941	833816	.	+	.	ID=gene-SPD_0815;Name=SPD_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0815
CP000410.2	Genbank	CDS	832941	833816	.	+	0	ID=cds-ABJ55190.1;Parent=gene-SPD_0815;Dbxref=NCBI_GP:ABJ55190.1;Name=ABJ55190.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0922%3B equivalent gene in S.pneumoniae R6 %3D spr0823%3B identified by match to protein family HMM PF00795;gbkey=CDS;locus_tag=SPD_0815;product=hydrolase%2C carbon-nitrogen family protein;protein_id=ABJ55190.1;transl_table=11
CP000410.2	Genbank	gene	833997	834806	.	-	.	ID=gene-SPD_0816;Name=SPD_0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0816
CP000410.2	Genbank	CDS	833997	834806	.	-	0	ID=cds-ABJ54304.1;Parent=gene-SPD_0816;Dbxref=NCBI_GP:ABJ54304.1;Name=ABJ54304.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0923%3B equivalent gene in S.pneumoniae R6 %3D spr0824%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_0816;product=Cof family protein;protein_id=ABJ54304.1;transl_table=11
CP000410.2	Genbank	gene	835353	836024	.	+	.	ID=gene-SPD_0817;Name=SPD_0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0817
CP000410.2	Genbank	CDS	835353	836024	.	+	0	ID=cds-ABJ55011.1;Parent=gene-SPD_0817;Dbxref=NCBI_GP:ABJ55011.1;Name=ABJ55011.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0925%3B equivalent gene in S.pneumoniae R6 %3D spr0826%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_0817;product=CAAX amino terminal protease family protein;protein_id=ABJ55011.1;transl_table=11
CP000410.2	Genbank	gene	836266	837174	.	+	.	ID=gene-SPD_0818;Name=SPD_0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0818
CP000410.2	Genbank	CDS	836266	837174	.	+	0	ID=cds-ABJ53965.1;Parent=gene-SPD_0818;Dbxref=NCBI_GP:ABJ53965.1;Name=ABJ53965.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0927%3B equivalent gene in S.pneumoniae R6 %3D spr0828%3B identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=SPD_0818;product=transcriptional regulator%2C LysR family protein;protein_id=ABJ53965.1;transl_table=11
CP000410.2	Genbank	gene	837171	837632	.	+	.	ID=gene-SPD_0819;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SPD_0819
CP000410.2	Genbank	CDS	837171	837632	.	+	0	ID=cds-ABJ54833.1;Parent=gene-SPD_0819;Dbxref=NCBI_GP:ABJ54833.1;Name=ABJ54833.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0928%3B equivalent gene in S.pneumoniae R6 %3D spr0829%3B identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077;gbkey=CDS;gene=lspA;locus_tag=SPD_0819;product=signal peptidase II;protein_id=ABJ54833.1;transl_table=11
CP000410.2	Genbank	gene	837622	838509	.	+	.	ID=gene-SPD_0820;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=SPD_0820
CP000410.2	Genbank	CDS	837622	838509	.	+	0	ID=cds-ABJ53694.1;Parent=gene-SPD_0820;Dbxref=NCBI_GP:ABJ53694.1;Name=ABJ53694.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0929%3B equivalent gene in S.pneumoniae R6 %3D spr0830%3B identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005;gbkey=CDS;gene=rluD;locus_tag=SPD_0820;product=ribosomal large subunit pseudouridine synthase D;protein_id=ABJ53694.1;transl_table=11
CP000410.2	Genbank	gene	838512	840395	.	+	.	ID=gene-SPD_0821;Name=cbpE;gbkey=Gene;gene=cbpE;gene_biotype=protein_coding;locus_tag=SPD_0821
CP000410.2	Genbank	CDS	838512	840395	.	+	0	ID=cds-ABJ54521.1;Parent=gene-SPD_0821;Dbxref=NCBI_GP:ABJ54521.1;Name=ABJ54521.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0930%3B equivalent gene in S.pneumoniae R6 %3D spr0831%3B identified by match to protein family HMM PF00753%3B match to protein family HMM PF01473;gbkey=CDS;gene=cbpE;locus_tag=SPD_0821;product=choline binding protein E;protein_id=ABJ54521.1;transl_table=11
CP000410.2	Genbank	gene	840496	841605	.	+	.	ID=gene-SPD_0822;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=SPD_0822
CP000410.2	Genbank	CDS	840496	841605	.	+	0	ID=cds-ABJ55060.1;Parent=gene-SPD_0822;Dbxref=NCBI_GP:ABJ55060.1;Name=ABJ55060.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0931%3B equivalent gene in S.pneumoniae R6 %3D spr0832%3B identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027;gbkey=CDS;gene=proB;locus_tag=SPD_0822;product=glutamate 5-kinase;protein_id=ABJ55060.1;transl_table=11
CP000410.2	Genbank	gene	841615	842877	.	+	.	ID=gene-SPD_0823;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=SPD_0823
CP000410.2	Genbank	CDS	841615	842877	.	+	0	ID=cds-ABJ54450.1;Parent=gene-SPD_0823;Dbxref=NCBI_GP:ABJ54450.1;Name=ABJ54450.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0932%3B equivalent gene in S.pneumoniae R6 %3D spr0833%3B identified by match to protein family HMM TIGR00407;gbkey=CDS;gene=proA;locus_tag=SPD_0823;product=gamma-glutamyl phosphate reductase;protein_id=ABJ54450.1;transl_table=11
CP000410.2	Genbank	gene	842881	843678	.	+	.	ID=gene-SPD_0824;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=SPD_0824
CP000410.2	Genbank	CDS	842881	843678	.	+	0	ID=cds-ABJ54753.1;Parent=gene-SPD_0824;Dbxref=NCBI_GP:ABJ54753.1;Name=ABJ54753.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0933%3B equivalent gene in S.pneumoniae R6 %3D spr0834%3B identified by match to protein family HMM PF01210%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112;gbkey=CDS;gene=proC;locus_tag=SPD_0824;product=pyrroline-5-carboxylate reductase;protein_id=ABJ54753.1;transl_table=11
CP000410.2	Genbank	gene	843794	844432	.	+	.	ID=gene-SPD_0825;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=SPD_0825
CP000410.2	Genbank	CDS	843794	844432	.	+	0	ID=cds-ABJ54857.1;Parent=gene-SPD_0825;Dbxref=NCBI_GP:ABJ54857.1;Name=ABJ54857.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0935%3B equivalent gene in S.pneumoniae R6 %3D spr0835%3B identified by match to protein family HMM PF02223%3B match to protein family HMM TIGR00041;gbkey=CDS;gene=tmk;locus_tag=SPD_0825;product=thymidylate kinase;protein_id=ABJ54857.1;transl_table=11
CP000410.2	Genbank	gene	844429	845319	.	+	.	ID=gene-SPD_0826;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=SPD_0826
CP000410.2	Genbank	CDS	844429	845319	.	+	0	ID=cds-ABJ54011.1;Parent=gene-SPD_0826;Dbxref=NCBI_GP:ABJ54011.1;Name=ABJ54011.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0936%3B equivalent gene in S.pneumoniae R6 %3D spr0836%3B identified by match to protein family HMM TIGR00678;gbkey=CDS;gene=holB;locus_tag=SPD_0826;product=DNA polymerase III%2C delta prime subunit;protein_id=ABJ54011.1;transl_table=11
CP000410.2	Genbank	gene	845359	845676	.	+	.	ID=gene-SPD_0827;Name=SPD_0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0827
CP000410.2	Genbank	CDS	845359	845676	.	+	0	ID=cds-ABJ54628.1;Parent=gene-SPD_0827;Dbxref=NCBI_GP:ABJ54628.1;Name=ABJ54628.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0937%3B equivalent gene in S.pneumoniae R6 %3D spr0837%3B identified by match to protein family HMM PF06156;gbkey=CDS;locus_tag=SPD_0827;product=hypothetical protein;protein_id=ABJ54628.1;transl_table=11
CP000410.2	Genbank	gene	845679	846548	.	+	.	ID=gene-SPD_0828;Name=SPD_0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0828
CP000410.2	Genbank	CDS	845679	846548	.	+	0	ID=cds-ABJ53815.1;Parent=gene-SPD_0828;Dbxref=NCBI_GP:ABJ53815.1;Name=ABJ53815.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0938%3B equivalent gene in S.pneumoniae R6 %3D spr0838%3B identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096;gbkey=CDS;locus_tag=SPD_0828;product=conserved hypothetical protein TIGR00096;protein_id=ABJ53815.1;transl_table=11
CP000410.2	Genbank	gene	846775	847293	.	+	.	ID=gene-SPD_0829;Name=SPD_0829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0829
CP000410.2	Genbank	CDS	846775	847293	.	+	0	ID=cds-ABJ55513.1;Parent=gene-SPD_0829;Dbxref=NCBI_GP:ABJ55513.1;Name=ABJ55513.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0939%3B equivalent gene in S.pneumoniae R6 %3D spr0839%3B identified by match to protein family HMM PF08020;gbkey=CDS;locus_tag=SPD_0829;product=hypothetical protein;protein_id=ABJ55513.1;transl_table=11
CP000410.2	Genbank	gene	847402	848049	.	+	.	ID=gene-SPD_0831;Name=SPD_0831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0831
CP000410.2	Genbank	CDS	847402	848049	.	+	0	ID=cds-ABJ54711.1;Parent=gene-SPD_0831;Dbxref=NCBI_GP:ABJ54711.1;Name=ABJ54711.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0840%3B identified by match to protein family HMM PF06970;gbkey=CDS;locus_tag=SPD_0831;product=hypothetical protein;protein_id=ABJ54711.1;transl_table=11
CP000410.2	Genbank	gene	848038	848427	.	-	.	ID=gene-SPD_0830;Name=SPD_0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0830
CP000410.2	Genbank	CDS	848038	848427	.	-	0	ID=cds-ABJ54315.1;Parent=gene-SPD_0830;Dbxref=NCBI_GP:ABJ54315.1;Name=ABJ54315.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0538%3B equivalent gene in S.pneumoniae R6 %3D spr0841%3B identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=SPD_0830;product=IS1381%2C transposase OrfB;protein_id=ABJ54315.1;transl_table=11
CP000410.2	Genbank	gene	848453	848842	.	-	.	ID=gene-SPD_0832;Name=SPD_0832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0832
CP000410.2	Genbank	CDS	848453	848842	.	-	0	ID=cds-ABJ54582.1;Parent=gene-SPD_0832;Dbxref=NCBI_GP:ABJ54582.1;Name=ABJ54582.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0942%3B equivalent gene in S.pneumoniae R6 %3D spr0842;gbkey=CDS;locus_tag=SPD_0832;product=IS1381%2C transposase OrfA;protein_id=ABJ54582.1;transl_table=11
CP000410.2	Genbank	gene	849336	850670	.	+	.	ID=gene-SPD_0833;Name=gid;gbkey=Gene;gene=gid;gene_biotype=protein_coding;locus_tag=SPD_0833
CP000410.2	Genbank	CDS	849336	850670	.	+	0	ID=cds-ABJ54938.1;Parent=gene-SPD_0833;Dbxref=NCBI_GP:ABJ54938.1;Name=ABJ54938.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0943%3B equivalent gene in S.pneumoniae R6 %3D spr0844%3B identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137;gbkey=CDS;gene=gid;locus_tag=SPD_0833;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme gid;protein_id=ABJ54938.1;transl_table=11
CP000410.2	Genbank	gene	850754	851491	.	+	.	ID=gene-SPD_0834;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SPD_0834
CP000410.2	Genbank	CDS	850754	851491	.	+	0	ID=cds-ABJ53606.1;Parent=gene-SPD_0834;Dbxref=NCBI_GP:ABJ53606.1;Name=ABJ53606.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0944%3B equivalent gene in S.pneumoniae R6 %3D spr0845%3B identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075;gbkey=CDS;gene=pyrH;locus_tag=SPD_0834;product=uridylate kinase;protein_id=ABJ53606.1;transl_table=11
CP000410.2	Genbank	gene	851500	852057	.	+	.	ID=gene-SPD_0835;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SPD_0835
CP000410.2	Genbank	CDS	851500	852057	.	+	0	ID=cds-ABJ55153.1;Parent=gene-SPD_0835;Dbxref=NCBI_GP:ABJ55153.1;Name=ABJ55153.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0945%3B equivalent gene in S.pneumoniae R6 %3D spr0846%3B identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496;gbkey=CDS;gene=frr;locus_tag=SPD_0835;product=ribosome recycling factor;protein_id=ABJ55153.1;transl_table=11
CP000410.2	Genbank	gene	852078	852971	.	+	.	ID=gene-SPD_0836;Name=SPD_0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0836
CP000410.2	Genbank	CDS	852078	852971	.	+	0	ID=cds-ABJ53881.1;Parent=gene-SPD_0836;Dbxref=NCBI_GP:ABJ53881.1;Name=ABJ53881.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0946%3B equivalent gene in S.pneumoniae R6 %3D spr0847;gbkey=CDS;locus_tag=SPD_0836;product=hypothetical protein;protein_id=ABJ53881.1;transl_table=11
CP000410.2	Genbank	gene	852980	853195	.	+	.	ID=gene-SPD_0837;Name=SPD_0837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0837
CP000410.2	Genbank	CDS	852980	853195	.	+	0	ID=cds-ABJ55364.1;Parent=gene-SPD_0837;Dbxref=NCBI_GP:ABJ55364.1;Name=ABJ55364.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0947%3B equivalent gene in S.pneumoniae R6 %3D spr0848%3B identified by match to protein family HMM PF06855;gbkey=CDS;locus_tag=SPD_0837;product=hypothetical protein;protein_id=ABJ55364.1;transl_table=11
CP000410.2	Genbank	gene	853281	854249	.	+	.	ID=gene-SPD_0838;Name=SPD_0838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0838
CP000410.2	Genbank	CDS	853281	854249	.	+	0	ID=cds-ABJ54324.1;Parent=gene-SPD_0838;Dbxref=NCBI_GP:ABJ54324.1;Name=ABJ54324.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0948%3B equivalent gene in S.pneumoniae R6 %3D spr0849%3B identified by match to protein family HMM PF02562;gbkey=CDS;locus_tag=SPD_0838;product=PhoH family protein;protein_id=ABJ54324.1;transl_table=11
CP000410.2	Genbank	gene	854442	854942	.	+	.	ID=gene-SPD_0839;Name=SPD_0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0839
CP000410.2	Genbank	CDS	854442	854942	.	+	0	ID=cds-ABJ54550.1;Parent=gene-SPD_0839;Dbxref=NCBI_GP:ABJ54550.1;Name=ABJ54550.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0950%3B equivalent gene in S.pneumoniae R6 %3D spr0850%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0839;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54550.1;transl_table=11
CP000410.2	Genbank	gene	854945	855172	.	+	.	ID=gene-SPD_0840;Name=SPD_0840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0840
CP000410.2	Genbank	CDS	854945	855172	.	+	0	ID=cds-ABJ55419.1;Parent=gene-SPD_0840;Dbxref=NCBI_GP:ABJ55419.1;Name=ABJ55419.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0951%3B equivalent gene in S.pneumoniae R6 %3D spr0851;gbkey=CDS;locus_tag=SPD_0840;product=hypothetical protein;protein_id=ABJ55419.1;transl_table=11
CP000410.2	Genbank	pseudogene	855572	856683	.	-	.	ID=gene-SPD_0841;Name=ald;Note=equivalent gene in S.pneumoniae R6 %3D spr0854%3B alanine dehydrogenase%2C authentic frameshift;gbkey=Gene;gene=ald;gene_biotype=pseudogene;locus_tag=SPD_0841;pseudo=true
CP000410.2	Genbank	gene	856860	857429	.	+	.	ID=gene-SPD_0842;Name=SPD_0842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0842
CP000410.2	Genbank	CDS	856860	857429	.	+	0	ID=cds-ABJ54291.1;Parent=gene-SPD_0842;Dbxref=NCBI_GP:ABJ54291.1;Name=ABJ54291.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0953%3B equivalent gene in S.pneumoniae R6 %3D spr0855%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0842;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54291.1;transl_table=11
CP000410.2	Genbank	gene	857497	858147	.	+	.	ID=gene-SPD_0843;Name=celA;gbkey=Gene;gene=celA;gene_biotype=protein_coding;locus_tag=SPD_0843
CP000410.2	Genbank	CDS	857497	858147	.	+	0	ID=cds-ABJ54636.1;Parent=gene-SPD_0843;Dbxref=NCBI_GP:ABJ54636.1;Name=ABJ54636.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0954%3B equivalent gene in S.pneumoniae R6 %3D spr0856%3B identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426%3B match to protein family HMM TIGR01259;gbkey=CDS;gene=celA;locus_tag=SPD_0843;product=competence protein CelA;protein_id=ABJ54636.1;transl_table=11
CP000410.2	Genbank	gene	858131	860371	.	+	.	ID=gene-SPD_0844;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=SPD_0844
CP000410.2	Genbank	CDS	858131	860371	.	+	0	ID=cds-ABJ53796.1;Parent=gene-SPD_0844;Dbxref=NCBI_GP:ABJ53796.1;Name=ABJ53796.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0955%3B equivalent gene in S.pneumoniae R6 %3D spr0857%3B identified by match to protein family HMM PF03772%3B match to protein family HMM TIGR00360%3B match to protein family HMM TIGR00361;gbkey=CDS;gene=celB;locus_tag=SPD_0844;product=competence protein CelB;protein_id=ABJ53796.1;transl_table=11
CP000410.2	Genbank	gene	860770	861246	.	+	.	ID=gene-SPD_0845;Name=SPD_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0845
CP000410.2	Genbank	CDS	860770	861246	.	+	0	ID=cds-ABJ54370.1;Parent=gene-SPD_0845;Dbxref=NCBI_GP:ABJ54370.1;Name=ABJ54370.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0957%3B equivalent gene in S.pneumoniae R6 %3D spr0859;gbkey=CDS;locus_tag=SPD_0845;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54370.1;transl_table=11
CP000410.2	Genbank	gene	861361	862542	.	+	.	ID=gene-SPD_0846;Name=SPD_0846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0846
CP000410.2	Genbank	CDS	861361	862542	.	+	0	ID=cds-ABJ55465.1;Parent=gene-SPD_0846;Dbxref=NCBI_GP:ABJ55465.1;Name=ABJ55465.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0958%3B equivalent gene in S.pneumoniae R6 %3D spr0860;gbkey=CDS;locus_tag=SPD_0846;product=membrane protein%2C putative;protein_id=ABJ55465.1;transl_table=11
CP000410.2	Genbank	gene	862822	863379	.	+	.	ID=gene-SPD_0847;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=SPD_0847
CP000410.2	Genbank	CDS	862822	863379	.	+	0	ID=cds-ABJ53940.1;Parent=gene-SPD_0847;Dbxref=NCBI_GP:ABJ53940.1;Name=ABJ53940.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0959%3B equivalent gene in S.pneumoniae R6 %3D spr0861%3B identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168;gbkey=CDS;gene=infC;locus_tag=SPD_0847;product=translation initiation factor IF-3;protein_id=ABJ53940.1;transl_table=11
CP000410.2	Genbank	gene	863412	863612	.	+	.	ID=gene-SPD_0848;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SPD_0848
CP000410.2	Genbank	CDS	863412	863612	.	+	0	ID=cds-ABJ54754.1;Parent=gene-SPD_0848;Dbxref=NCBI_GP:ABJ54754.1;Name=ABJ54754.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0960%3B equivalent gene in S.pneumoniae R6 %3D spr0862%3B identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001;gbkey=CDS;gene=rpmI;locus_tag=SPD_0848;product=ribosomal protein L35;protein_id=ABJ54754.1;transl_table=11
CP000410.2	Genbank	gene	863664	864023	.	+	.	ID=gene-SPD_0849;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SPD_0849
CP000410.2	Genbank	CDS	863664	864023	.	+	0	ID=cds-ABJ54841.1;Parent=gene-SPD_0849;Dbxref=NCBI_GP:ABJ54841.1;Name=ABJ54841.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0961%3B equivalent gene in S.pneumoniae R6 %3D spr0863%3B identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032;gbkey=CDS;gene=rplT;locus_tag=SPD_0849;product=ribosomal protein L20;protein_id=ABJ54841.1;transl_table=11
CP000410.2	Genbank	gene	864081	864461	.	+	.	ID=gene-SPD_0850;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=SPD_0850
CP000410.2	Genbank	CDS	864081	864461	.	+	0	ID=cds-ABJ54008.1;Parent=gene-SPD_0850;Dbxref=NCBI_GP:ABJ54008.1;Name=ABJ54008.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0962%3B equivalent gene in S.pneumoniae R6 %3D spr0864%3B identified by match to protein family HMM PF00903;gbkey=CDS;gene=gloA;locus_tag=SPD_0850;product=lactoylglutathione lyase;protein_id=ABJ54008.1;transl_table=11
CP000410.2	Genbank	gene	864711	865511	.	+	.	ID=gene-SPD_0851;Name=pyrK;gbkey=Gene;gene=pyrK;gene_biotype=protein_coding;locus_tag=SPD_0851
CP000410.2	Genbank	CDS	864711	865511	.	+	0	ID=cds-ABJ54272.1;Parent=gene-SPD_0851;Dbxref=NCBI_GP:ABJ54272.1;Name=ABJ54272.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0963%3B equivalent gene in S.pneumoniae R6 %3D spr0865%3B identified by match to protein family HMM PF00175%3B match to protein family HMM PF00970;gbkey=CDS;gene=pyrK;locus_tag=SPD_0851;product=dihydroorotate dehydrogenase electron transfer subunit;protein_id=ABJ54272.1;transl_table=11
CP000410.2	Genbank	gene	865522	866460	.	+	.	ID=gene-SPD_0852;Name=pyrDb;gbkey=Gene;gene=pyrDb;gene_biotype=protein_coding;locus_tag=SPD_0852
CP000410.2	Genbank	CDS	865522	866460	.	+	0	ID=cds-ABJ55353.1;Parent=gene-SPD_0852;Dbxref=NCBI_GP:ABJ55353.1;Name=ABJ55353.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0964%3B equivalent gene in S.pneumoniae R6 %3D spr0866%3B identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;gene=pyrDb;locus_tag=SPD_0852;product=dihydroorotate dehydrogenase%2C catalytic subunit;protein_id=ABJ55353.1;transl_table=11
CP000410.2	Genbank	gene	866559	868667	.	+	.	ID=gene-SPD_0853;Name=lytB;gbkey=Gene;gene=lytB;gene_biotype=protein_coding;locus_tag=SPD_0853
CP000410.2	Genbank	CDS	866559	868667	.	+	0	ID=cds-ABJ55408.1;Parent=gene-SPD_0853;Dbxref=NCBI_GP:ABJ55408.1;Name=ABJ55408.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0867%3B identified by match to protein family HMM PF01473%3B match to protein family HMM PF01832;gbkey=CDS;gene=lytB;locus_tag=SPD_0853;product=endo-beta-N-acetylglucosaminidase precursor%2C putative;protein_id=ABJ55408.1;transl_table=11
CP000410.2	Genbank	gene	868728	870383	.	-	.	ID=gene-SPD_0854;Name=pavA;gbkey=Gene;gene=pavA;gene_biotype=protein_coding;locus_tag=SPD_0854
CP000410.2	Genbank	CDS	868728	870383	.	-	0	ID=cds-ABJ54581.1;Parent=gene-SPD_0854;Dbxref=NCBI_GP:ABJ54581.1;Name=ABJ54581.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0966%3B equivalent gene in S.pneumoniae R6 %3D spr0868%3B identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833;gbkey=CDS;gene=pavA;locus_tag=SPD_0854;product=adherence and virulence protein A;protein_id=ABJ54581.1;transl_table=11
CP000410.2	Genbank	gene	870488	870985	.	+	.	ID=gene-SPD_0855;Name=SPD_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0855
CP000410.2	Genbank	CDS	870488	870985	.	+	0	ID=cds-ABJ54640.1;Parent=gene-SPD_0855;Dbxref=NCBI_GP:ABJ54640.1;Name=ABJ54640.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0967%3B equivalent gene in S.pneumoniae R6 %3D spr0869%3B identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043;gbkey=CDS;locus_tag=SPD_0855;product=conserved hypothetical protein TIGR00043;protein_id=ABJ54640.1;transl_table=11
CP000410.2	Genbank	gene	870966	871361	.	+	.	ID=gene-SPD_0856;Name=dgkA;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=SPD_0856
CP000410.2	Genbank	CDS	870966	871361	.	+	0	ID=cds-ABJ53910.1;Parent=gene-SPD_0856;Dbxref=NCBI_GP:ABJ53910.1;Name=ABJ53910.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0968%3B equivalent gene in S.pneumoniae R6 %3D spr0870%3B identified by match to protein family HMM PF01219;gbkey=CDS;gene=dgkA;locus_tag=SPD_0856;product=diacylglycerol kinase;protein_id=ABJ53910.1;transl_table=11
CP000410.2	Genbank	gene	871378	872277	.	+	.	ID=gene-SPD_0857;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=SPD_0857
CP000410.2	Genbank	CDS	871378	872277	.	+	0	ID=cds-ABJ55058.1;Parent=gene-SPD_0857;Dbxref=NCBI_GP:ABJ55058.1;Name=ABJ55058.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0969%3B equivalent gene in S.pneumoniae R6 %3D spr0871%3B identified by match to protein family HMM PF01926%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436%3B match to protein family HMM TIGR00650;gbkey=CDS;gene=era;locus_tag=SPD_0857;product=GTP-binding protein Era;protein_id=ABJ55058.1;transl_table=11
CP000410.2	Genbank	gene	872326	873150	.	+	.	ID=gene-SPD_0858;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=SPD_0858
CP000410.2	Genbank	CDS	872326	873150	.	+	0	ID=cds-ABJ54221.1;Parent=gene-SPD_0858;Dbxref=NCBI_GP:ABJ54221.1;Name=ABJ54221.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0970%3B equivalent gene in S.pneumoniae R6 %3D spr0872%3B identified by match to protein family HMM PF01149%3B match to protein family HMM PF06827%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577;gbkey=CDS;gene=mutM;locus_tag=SPD_0858;product=formamidopyrimidine-DNA glycosylase;protein_id=ABJ54221.1;transl_table=11
CP000410.2	Genbank	gene	873150	873755	.	+	.	ID=gene-SPD_0859;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SPD_0859
CP000410.2	Genbank	CDS	873150	873755	.	+	0	ID=cds-ABJ55293.1;Parent=gene-SPD_0859;Dbxref=NCBI_GP:ABJ55293.1;Name=ABJ55293.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0971%3B equivalent gene in S.pneumoniae R6 %3D spr0873%3B identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152;gbkey=CDS;gene=coaE;locus_tag=SPD_0859;product=dephospho-CoA kinase;protein_id=ABJ55293.1;transl_table=11
CP000410.2	Genbank	gene	873742	874941	.	+	.	ID=gene-SPD_0860;Name=pmrA;gbkey=Gene;gene=pmrA;gene_biotype=protein_coding;locus_tag=SPD_0860
CP000410.2	Genbank	CDS	873742	874941	.	+	0	ID=cds-ABJ54479.1;Parent=gene-SPD_0860;Dbxref=NCBI_GP:ABJ54479.1;Name=ABJ54479.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0972%3B equivalent gene in S.pneumoniae R6 %3D spr0875%3B identified by match to protein family HMM PF07690;gbkey=CDS;gene=pmrA;locus_tag=SPD_0860;product=multi-drug resistance efflux pump;protein_id=ABJ54479.1;transl_table=11
CP000410.2	Genbank	gene	875130	875363	.	+	.	ID=gene-SPD_0861;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SPD_0861
CP000410.2	Genbank	CDS	875130	875363	.	+	0	ID=cds-ABJ55141.1;Parent=gene-SPD_0861;Dbxref=NCBI_GP:ABJ55141.1;Name=ABJ55141.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0974%3B equivalent gene in S.pneumoniae R6 %3D spr0877%3B identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810;gbkey=CDS;gene=secG;locus_tag=SPD_0861;product=preprotein translocase%2C SecG subunit;protein_id=ABJ55141.1;transl_table=11
CP000410.2	Genbank	gene	875465	877819	.	+	.	ID=gene-SPD_0862;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=SPD_0862
CP000410.2	Genbank	CDS	875465	877819	.	+	0	ID=cds-ABJ54232.1;Parent=gene-SPD_0862;Dbxref=NCBI_GP:ABJ54232.1;Name=ABJ54232.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0975%3B equivalent gene in S.pneumoniae R6 %3D spr0878%3B identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063;gbkey=CDS;gene=rnr;locus_tag=SPD_0862;product=ribonuclease R;protein_id=ABJ54232.1;transl_table=11
CP000410.2	Genbank	gene	877782	878249	.	+	.	ID=gene-SPD_0863;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SPD_0863
CP000410.2	Genbank	CDS	877782	878249	.	+	0	ID=cds-ABJ54746.1;Parent=gene-SPD_0863;Dbxref=NCBI_GP:ABJ54746.1;Name=ABJ54746.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0976%3B equivalent gene in S.pneumoniae R6 %3D spr0879%3B identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086;gbkey=CDS;gene=smpB;locus_tag=SPD_0863;product=SsrA-binding protein;protein_id=ABJ54746.1;transl_table=11
CP000410.2	Genbank	gene	878265	879125	.	+	.	ID=gene-SPD_0864;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=SPD_0864
CP000410.2	Genbank	CDS	878265	879125	.	+	0	ID=cds-ABJ53903.1;Parent=gene-SPD_0864;Dbxref=NCBI_GP:ABJ53903.1;Name=ABJ53903.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0977%3B equivalent gene in S.pneumoniae R6 %3D spr0880%3B identified by match to protein family HMM PF03848%3B match to protein family HMM TIGR00477;gbkey=CDS;gene=tehB;locus_tag=SPD_0864;product=tellurite resistance protein TehB;protein_id=ABJ53903.1;transl_table=11
CP000410.2	Genbank	gene	879198	880151	.	+	.	ID=gene-SPD_0865;Name=coiA;gbkey=Gene;gene=coiA;gene_biotype=protein_coding;locus_tag=SPD_0865
CP000410.2	Genbank	CDS	879198	880151	.	+	0	ID=cds-ABJ54554.1;Parent=gene-SPD_0865;Dbxref=NCBI_GP:ABJ54554.1;Name=ABJ54554.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0978%3B equivalent gene in S.pneumoniae R6 %3D spr0881%3B identified by match to protein family HMM PF06054;gbkey=CDS;gene=coiA;locus_tag=SPD_0865;product=competence protein CoiA;protein_id=ABJ54554.1;transl_table=11
CP000410.2	Genbank	gene	880170	881972	.	+	.	ID=gene-SPD_0866;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=SPD_0866
CP000410.2	Genbank	CDS	880170	881972	.	+	0	ID=cds-ABJ53708.1;Parent=gene-SPD_0866;Dbxref=NCBI_GP:ABJ53708.1;Name=ABJ53708.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0979%3B equivalent gene in S.pneumoniae R6 %3D spr0882%3B identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR00181;gbkey=CDS;gene=pepF;locus_tag=SPD_0866;product=oligoendopeptidase F;protein_id=ABJ53708.1;transl_table=11
CP000410.2	Genbank	gene	881974	882687	.	+	.	ID=gene-SPD_0867;Name=SPD_0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0867
CP000410.2	Genbank	CDS	881974	882687	.	+	0	ID=cds-ABJ54314.1;Parent=gene-SPD_0867;Dbxref=NCBI_GP:ABJ54314.1;Name=ABJ54314.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0980%3B equivalent gene in S.pneumoniae R6 %3D spr0883%3B identified by match to protein family HMM PF01596;gbkey=CDS;locus_tag=SPD_0867;product=O-methyltransferase;protein_id=ABJ54314.1;transl_table=11
CP000410.2	Genbank	gene	882754	883695	.	+	.	ID=gene-SPD_0868;Name=SPD_0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0868
CP000410.2	Genbank	CDS	882754	883695	.	+	0	ID=cds-ABJ55379.1;Parent=gene-SPD_0868;Dbxref=NCBI_GP:ABJ55379.1;Name=ABJ55379.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0981%3B equivalent gene in S.pneumoniae R6 %3D spr0884%3B identified by match to protein family HMM PF00639;gbkey=CDS;locus_tag=SPD_0868;product=protease maturation protein%2C putative;protein_id=ABJ55379.1;transl_table=11
CP000410.2	Genbank	gene	883913	884155	.	-	.	ID=gene-SPD_0869;Name=SPD_0869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0869
CP000410.2	Genbank	CDS	883913	884155	.	-	0	ID=cds-ABJ54223.1;Parent=gene-SPD_0869;Dbxref=NCBI_GP:ABJ54223.1;Name=ABJ54223.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr0885;gbkey=CDS;locus_tag=SPD_0869;product=hypothetical protein;protein_id=ABJ54223.1;transl_table=11
CP000410.2	Genbank	gene	884915	885535	.	-	.	ID=gene-SPD_0870;Name=SPD_0870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0870
CP000410.2	Genbank	CDS	884915	885535	.	-	0	ID=cds-ABJ55049.1;Parent=gene-SPD_0870;Dbxref=NCBI_GP:ABJ55049.1;Name=ABJ55049.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0984%3B equivalent gene in S.pneumoniae R6 %3D spr0887%3B identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=SPD_0870;product=phosphoglycerate mutase family protein;protein_id=ABJ55049.1;transl_table=11
CP000410.2	Genbank	gene	885535	886017	.	-	.	ID=gene-SPD_0871;Name=SPD_0871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0871
CP000410.2	Genbank	CDS	885535	886017	.	-	0	ID=cds-ABJ54409.1;Parent=gene-SPD_0871;Dbxref=NCBI_GP:ABJ54409.1;Name=ABJ54409.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0985%3B equivalent gene in S.pneumoniae R6 %3D spr0888%3B identified by match to protein family HMM PF04073;gbkey=CDS;locus_tag=SPD_0871;product=regulatory protein%2C putative;protein_id=ABJ54409.1;transl_table=11
CP000410.2	Genbank	gene	886017	886859	.	-	.	ID=gene-SPD_0872;Name=SPD_0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0872
CP000410.2	Genbank	CDS	886017	886859	.	-	0	ID=cds-ABJ55282.1;Parent=gene-SPD_0872;Dbxref=NCBI_GP:ABJ55282.1;Name=ABJ55282.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0986%3B equivalent gene in S.pneumoniae R6 %3D spr0889%3B identified by match to protein family HMM PF04018;gbkey=CDS;locus_tag=SPD_0872;product=membrane protein%2C putative;protein_id=ABJ55282.1;transl_table=11
CP000410.2	Genbank	gene	886954	887754	.	-	.	ID=gene-SPD_0873;Name=SPD_0873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0873
CP000410.2	Genbank	CDS	886954	887754	.	-	0	ID=cds-ABJ55313.1;Parent=gene-SPD_0873;Dbxref=NCBI_GP:ABJ55313.1;Name=ABJ55313.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0987%3B equivalent gene in S.pneumoniae R6 %3D spr0890%3B identified by match to protein family HMM PF01183;gbkey=CDS;locus_tag=SPD_0873;product=hypothetical protein;protein_id=ABJ55313.1;transl_table=11
CP000410.2	Genbank	gene	887898	889277	.	+	.	ID=gene-SPD_0874;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SPD_0874
CP000410.2	Genbank	CDS	887898	889277	.	+	0	ID=cds-ABJ54468.1;Parent=gene-SPD_0874;Dbxref=NCBI_GP:ABJ54468.1;Name=ABJ54468.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0988%3B equivalent gene in S.pneumoniae R6 %3D spr0891%3B identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM TIGR01173;gbkey=CDS;gene=glmU;locus_tag=SPD_0874;product=UDP-N-acetylglucosamine pyrophosphorylase;protein_id=ABJ54468.1;transl_table=11
CP000410.2	Genbank	gene	889287	889832	.	+	.	ID=gene-SPD_0875;Name=SPD_0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0875
CP000410.2	Genbank	CDS	889287	889832	.	+	0	ID=cds-ABJ53664.1;Parent=gene-SPD_0875;Dbxref=NCBI_GP:ABJ53664.1;Name=ABJ53664.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0989%3B equivalent gene in S.pneumoniae R6 %3D spr0892%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_0875;product=hydrolase%2C NUDIX family protein;protein_id=ABJ53664.1;transl_table=11
CP000410.2	Genbank	gene	889844	890158	.	+	.	ID=gene-SPD_0876;Name=SPD_0876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0876
CP000410.2	Genbank	CDS	889844	890158	.	+	0	ID=cds-ABJ54734.1;Parent=gene-SPD_0876;Dbxref=NCBI_GP:ABJ54734.1;Name=ABJ54734.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0990%3B equivalent gene in S.pneumoniae R6 %3D spr0893;gbkey=CDS;locus_tag=SPD_0876;product=hypothetical protein;protein_id=ABJ54734.1;transl_table=11
CP000410.2	Genbank	gene	890175	890867	.	+	.	ID=gene-SPD_0877;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=SPD_0877
CP000410.2	Genbank	CDS	890175	890867	.	+	0	ID=cds-ABJ55035.1;Parent=gene-SPD_0877;Dbxref=NCBI_GP:ABJ55035.1;Name=ABJ55035.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0991%3B equivalent gene in S.pneumoniae R6 %3D spr0894%3B identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR01704;gbkey=CDS;gene=mtnN;locus_tag=SPD_0877;product=MTA/SAH nucleosidase;protein_id=ABJ55035.1;transl_table=11
CP000410.2	Genbank	gene	890944	891435	.	+	.	ID=gene-SPD_0878;Name=SPD_0878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0878
CP000410.2	Genbank	CDS	890944	891435	.	+	0	ID=cds-ABJ53627.1;Parent=gene-SPD_0878;Dbxref=NCBI_GP:ABJ53627.1;Name=ABJ53627.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0992%3B equivalent gene in S.pneumoniae R6 %3D spr0895%3B identified by match to protein family HMM PF04394;gbkey=CDS;locus_tag=SPD_0878;product=hypothetical protein;protein_id=ABJ53627.1;transl_table=11
CP000410.2	Genbank	gene	891533	892123	.	+	.	ID=gene-SPD_0879;Name=SPD_0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0879
CP000410.2	Genbank	CDS	891533	892123	.	+	0	ID=cds-ABJ54234.1;Parent=gene-SPD_0879;Dbxref=NCBI_GP:ABJ54234.1;Name=ABJ54234.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0993%3B equivalent gene in S.pneumoniae R6 %3D spr0896%3B identified by match to protein family HMM PF00929;gbkey=CDS;locus_tag=SPD_0879;product=exonuclease;protein_id=ABJ54234.1;transl_table=11
CP000410.2	Genbank	gene	892132	893895	.	+	.	ID=gene-SPD_0880;Name=SPD_0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0880
CP000410.2	Genbank	CDS	892132	893895	.	+	0	ID=cds-ABJ54796.1;Parent=gene-SPD_0880;Dbxref=NCBI_GP:ABJ54796.1;Name=ABJ54796.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0994%3B equivalent gene in S.pneumoniae R6 %3D spr0897%3B identified by match to protein family HMM PF03009;gbkey=CDS;locus_tag=SPD_0880;product=glycerophosphoryl diester phosphodiesterase family protein;protein_id=ABJ54796.1;transl_table=11
CP000410.2	Genbank	pseudogene	894091	894456	.	+	.	ID=gene-SPD_0881;Name=SPD_0881;Note=equivalent gene in S.pneumoniae R6 %3D spr0898%3B IS630-Spn1%2C transposase Orf1%2C degenerate%3B identified by match to protein family HMM PF01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0881;pseudo=true
CP000410.2	Genbank	gene	894615	894755	.	+	.	ID=gene-SPD_0882;Name=SPD_0882;Note=equivalent gene in S.pneumoniae R6 %3D spr0899%3B IS630-Spn1%2C transposase Orf2%2C truncation;gbkey=Gene;gene_biotype=other;locus_tag=SPD_0882
CP000410.2	Genbank	gene	894916	895116	.	+	.	ID=gene-SPD_0883;Name=SPD_0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0883
CP000410.2	Genbank	CDS	894916	895116	.	+	0	ID=cds-ABJ54785.1;Parent=gene-SPD_0883;Dbxref=NCBI_GP:ABJ54785.1;Name=ABJ54785.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0997%3B equivalent gene in S.pneumoniae R6 %3D spr0900;gbkey=CDS;locus_tag=SPD_0883;product=hypothetical protein;protein_id=ABJ54785.1;transl_table=11
CP000410.2	Genbank	gene	895158	895562	.	+	.	ID=gene-SPD_0884;Name=SPD_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0884
CP000410.2	Genbank	CDS	895158	895562	.	+	0	ID=cds-ABJ55316.1;Parent=gene-SPD_0884;Dbxref=NCBI_GP:ABJ55316.1;Name=ABJ55316.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0998%3B equivalent gene in S.pneumoniae R6 %3D spr0902;gbkey=CDS;locus_tag=SPD_0884;product=hypothetical protein;protein_id=ABJ55316.1;transl_table=11
CP000410.2	Genbank	gene	895793	896500	.	+	.	ID=gene-SPD_0885;Name=ccdA-2;gbkey=Gene;gene=ccdA-2;gene_biotype=protein_coding;locus_tag=SPD_0885
CP000410.2	Genbank	CDS	895793	896500	.	+	0	ID=cds-ABJ54567.1;Parent=gene-SPD_0885;Dbxref=NCBI_GP:ABJ54567.1;Name=ABJ54567.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0999%3B equivalent gene in S.pneumoniae R6 %3D spr0903%3B identified by match to protein family HMM PF02683;gbkey=CDS;gene=ccdA-2;locus_tag=SPD_0885;product=cytochrome c-type biogenesis protein CcdA;protein_id=ABJ54567.1;transl_table=11
CP000410.2	Genbank	gene	896511	897068	.	+	.	ID=gene-SPD_0886;Name=SPD_0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0886
CP000410.2	Genbank	CDS	896511	897068	.	+	0	ID=cds-ABJ55355.1;Parent=gene-SPD_0886;Dbxref=NCBI_GP:ABJ55355.1;Name=ABJ55355.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1000%3B equivalent gene in S.pneumoniae R6 %3D spr0904;gbkey=CDS;locus_tag=SPD_0886;product=thioredoxin family protein;protein_id=ABJ55355.1;transl_table=11
CP000410.2	Genbank	gene	897442	898833	.	+	.	ID=gene-SPD_0887;Name=SPD_0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0887
CP000410.2	Genbank	CDS	897442	898833	.	+	0	ID=cds-ABJ54570.1;Parent=gene-SPD_0887;Dbxref=NCBI_GP:ABJ54570.1;Name=ABJ54570.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1001%3B equivalent gene in S.pneumoniae R6 %3D spr0905%3B identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=SPD_0887;product=amino acid permease family protein;protein_id=ABJ54570.1;transl_table=11
CP000410.2	Genbank	gene	898976	899893	.	+	.	ID=gene-SPD_0888;Name=lmb;gbkey=Gene;gene=lmb;gene_biotype=protein_coding;locus_tag=SPD_0888
CP000410.2	Genbank	CDS	898976	899893	.	+	0	ID=cds-ABJ54035.1;Parent=gene-SPD_0888;Dbxref=NCBI_GP:ABJ54035.1;Name=ABJ54035.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1002%3B equivalent gene in S.pneumoniae R6 %3D spr0906%3B identified by match to protein family HMM PF01297;gbkey=CDS;gene=lmb;locus_tag=SPD_0888;product=adhesion lipoprotein;protein_id=ABJ54035.1;transl_table=11
CP000410.2	Genbank	gene	899901	902462	.	+	.	ID=gene-SPD_0889;Name=phtD;gbkey=Gene;gene=phtD;gene_biotype=protein_coding;locus_tag=SPD_0889
CP000410.2	Genbank	CDS	899901	902462	.	+	0	ID=cds-ABJ54443.1;Parent=gene-SPD_0889;Dbxref=NCBI_GP:ABJ54443.1;Name=ABJ54443.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1003%3B equivalent gene in S.pneumoniae R6 %3D spr0907%3B identified by match to protein family HMM PF04270%3B match to protein family HMM TIGR01363;gbkey=CDS;gene=phtD;locus_tag=SPD_0889;product=pneumococcal histidine triad protein D precursor;protein_id=ABJ54443.1;transl_table=11
CP000410.2	Genbank	gene	902672	905791	.	+	.	ID=gene-SPD_0890;Name=phtE;gbkey=Gene;gene=phtE;gene_biotype=protein_coding;locus_tag=SPD_0890
CP000410.2	Genbank	CDS	902672	905791	.	+	0	ID=cds-ABJ54818.1;Parent=gene-SPD_0890;Dbxref=NCBI_GP:ABJ54818.1;Name=ABJ54818.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1004%3B equivalent gene in S.pneumoniae R6 %3D spr0908%3B identified by match to protein family HMM PF04270%3B match to protein family HMM TIGR01363;gbkey=CDS;gene=phtE;locus_tag=SPD_0890;product=pneumococcal histidine triad protein E precursor;protein_id=ABJ54818.1;transl_table=11
CP000410.2	Genbank	pseudogene	906621	906761	.	+	.	ID=gene-SPD_0891;Name=SPD_0891;Note=equivalent gene in S.pneumoniae R6 %3D spr0909%3B pneumococcal histidine triad protein%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0891;pseudo=true
CP000410.2	Genbank	pseudogene	906801	907343	.	+	.	ID=gene-SPD_0892;Name=SPD_0892;Note=equivalent gene in S.pneumoniae R6 %3D spr0910%3B pneumococcal histidine triad protein E precursor%2C truncation%3B identified by match to protein family HMM PF04270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0892;pseudo=true
CP000410.2	Genbank	gene	907591	908220	.	+	.	ID=gene-SPD_0893;Name=SPD_0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0893
CP000410.2	Genbank	CDS	907591	908220	.	+	0	ID=cds-ABJ55212.1;Parent=gene-SPD_0893;Dbxref=NCBI_GP:ABJ55212.1;Name=ABJ55212.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1007%3B equivalent gene in S.pneumoniae R6 %3D spr0912;gbkey=CDS;locus_tag=SPD_0893;product=hypothetical protein;protein_id=ABJ55212.1;transl_table=11
CP000410.2	Genbank	gene	908263	909483	.	-	.	ID=gene-SPD_0894;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=SPD_0894
CP000410.2	Genbank	CDS	908263	909483	.	-	0	ID=cds-ABJ54157.1;Parent=gene-SPD_0894;Dbxref=NCBI_GP:ABJ54157.1;Name=ABJ54157.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1008%3B equivalent gene in S.pneumoniae R6 %3D spr0913%3B identified by match to protein family HMM PF01546%3B match to protein family HMM PF05343%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01882;gbkey=CDS;gene=pepT;locus_tag=SPD_0894;product=peptidase T;protein_id=ABJ54157.1;transl_table=11
CP000410.2	Genbank	gene	909638	910732	.	+	.	ID=gene-SPD_0895;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=SPD_0895
CP000410.2	Genbank	CDS	909638	910732	.	+	0	ID=cds-ABJ55329.1;Parent=gene-SPD_0895;Dbxref=NCBI_GP:ABJ55329.1;Name=ABJ55329.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1009%3B equivalent gene in S.pneumoniae R6 %3D spr0914%3B identified by match to protein family HMM PF00762%3B match to protein family HMM TIGR00109;gbkey=CDS;gene=hemH;locus_tag=SPD_0895;product=ferrochelatase;protein_id=ABJ55329.1;transl_table=11
CP000410.2	Genbank	gene	910774	911151	.	-	.	ID=gene-SPD_0896;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=SPD_0896
CP000410.2	Genbank	CDS	910774	911151	.	-	0	ID=cds-ABJ54462.1;Parent=gene-SPD_0896;Dbxref=NCBI_GP:ABJ54462.1;Name=ABJ54462.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1010%3B equivalent gene in S.pneumoniae R6 %3D spr0915 Protein encodes a channel which opens in response to a membrane stretch force. Probably serves as an osmotic gauge. Carboxy terminus tends to be more divergent across species with a high degree of sequence conservation found at the N-terminus%3B identified by match to protein family HMM PF01741%3B match to protein family HMM TIGR00220;gbkey=CDS;gene=mscL;locus_tag=SPD_0896;product=large conductance mechanosensitive channel protein MscL;protein_id=ABJ54462.1;transl_table=11
CP000410.2	Genbank	gene	911233	911664	.	-	.	ID=gene-SPD_0897;Name=SPD_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0897
CP000410.2	Genbank	CDS	911233	911664	.	-	0	ID=cds-ABJ55318.1;Parent=gene-SPD_0897;Dbxref=NCBI_GP:ABJ55318.1;Name=ABJ55318.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1011%3B equivalent gene in S.pneumoniae R6 %3D spr0916%3B identified by match to protein family HMM PF04138;gbkey=CDS;locus_tag=SPD_0897;product=GtrA family protein;protein_id=ABJ55318.1;transl_table=11
CP000410.2	Genbank	gene	911787	912296	.	+	.	ID=gene-SPD_0898;Name=SPD_0898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0898
CP000410.2	Genbank	CDS	911787	912296	.	+	0	ID=cds-ABJ53788.1;Parent=gene-SPD_0898;Dbxref=NCBI_GP:ABJ53788.1;Name=ABJ53788.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1012%3B equivalent gene in S.pneumoniae R6 %3D spr0917%3B identified by match to protein family HMM PF06177;gbkey=CDS;locus_tag=SPD_0898;product=membrane protein%2C putative;protein_id=ABJ53788.1;transl_table=11
CP000410.2	Genbank	gene	912396	912468	.	+	.	ID=gene-SPD_0899;Name=SPD_0899;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_0899
CP000410.2	Genbank	tRNA	912396	912468	.	+	.	ID=rna-SPD_0899;Parent=gene-SPD_0899;gbkey=tRNA;locus_tag=SPD_0899;product=tRNA-Thr
CP000410.2	Genbank	exon	912396	912468	.	+	.	ID=exon-SPD_0899-1;Parent=rna-SPD_0899;gbkey=tRNA;locus_tag=SPD_0899;product=tRNA-Thr
CP000410.2	Genbank	gene	912811	913887	.	+	.	ID=gene-SPD_0900;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=SPD_0900
CP000410.2	Genbank	CDS	912811	913887	.	+	0	ID=cds-ABJ54733.1;Parent=gene-SPD_0900;Dbxref=NCBI_GP:ABJ54733.1;Name=ABJ54733.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1013%3B equivalent gene in S.pneumoniae R6 %3D spr0918%3B identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296;gbkey=CDS;gene=asd;locus_tag=SPD_0900;product=aspartate-semialdehyde dehydrogenase;protein_id=ABJ54733.1;transl_table=11
CP000410.2	Genbank	gene	913943	914878	.	+	.	ID=gene-SPD_0901;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=SPD_0901
CP000410.2	Genbank	CDS	913943	914878	.	+	0	ID=cds-ABJ54534.1;Parent=gene-SPD_0901;Dbxref=NCBI_GP:ABJ54534.1;Name=ABJ54534.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1014%3B equivalent gene in S.pneumoniae R6 %3D spr0919%3B identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674;gbkey=CDS;gene=dapA;locus_tag=SPD_0901;product=dihydrodipicolinate synthase;protein_id=ABJ54534.1;transl_table=11
CP000410.2	Genbank	gene	914925	916298	.	-	.	ID=gene-SPD_0902;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=SPD_0902
CP000410.2	Genbank	CDS	914925	916298	.	-	0	ID=cds-ABJ55144.1;Parent=gene-SPD_0902;Dbxref=NCBI_GP:ABJ55144.1;Name=ABJ55144.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1016%3B equivalent gene in S.pneumoniae R6 %3D spr0920%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450%3B match to protein family HMM TIGR00650;gbkey=CDS;gene=trmE;locus_tag=SPD_0902;product=tRNA modification GTPase TrmE;protein_id=ABJ55144.1;transl_table=11
CP000410.2	Genbank	gene	916435	916617	.	-	.	ID=gene-SPD_0903;Name=xylH;gbkey=Gene;gene=xylH;gene_biotype=protein_coding;locus_tag=SPD_0903
CP000410.2	Genbank	CDS	916435	916617	.	-	0	ID=cds-ABJ53682.1;Parent=gene-SPD_0903;Dbxref=NCBI_GP:ABJ53682.1;Name=ABJ53682.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1017%3B equivalent gene in S.pneumoniae R6 %3D spr0921%3B identified by match to protein family HMM PF01361;gbkey=CDS;gene=xylH;locus_tag=SPD_0903;product=4-oxalocrotonate tautomerase;protein_id=ABJ53682.1;transl_table=11
CP000410.2	Genbank	gene	916740	917339	.	+	.	ID=gene-SPD_0904;Name=tdk;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=SPD_0904
CP000410.2	Genbank	CDS	916740	917339	.	+	0	ID=cds-ABJ54716.1;Parent=gene-SPD_0904;Dbxref=NCBI_GP:ABJ54716.1;Name=ABJ54716.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1018%3B equivalent gene in S.pneumoniae R6 %3D spr0922%3B identified by match to protein family HMM PF00265;gbkey=CDS;gene=tdk;locus_tag=SPD_0904;product=thymidine kinase;protein_id=ABJ54716.1;transl_table=11
CP000410.2	Genbank	gene	917329	917808	.	+	.	ID=gene-SPD_0905;Name=SPD_0905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0905
CP000410.2	Genbank	CDS	917329	917808	.	+	0	ID=cds-ABJ54366.1;Parent=gene-SPD_0905;Dbxref=NCBI_GP:ABJ54366.1;Name=ABJ54366.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1019%3B equivalent gene in S.pneumoniae R6 %3D spr0923%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0905;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54366.1;transl_table=11
CP000410.2	Genbank	gene	917818	918897	.	+	.	ID=gene-SPD_0906;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SPD_0906
CP000410.2	Genbank	CDS	917818	918897	.	+	0	ID=cds-ABJ55449.1;Parent=gene-SPD_0906;Dbxref=NCBI_GP:ABJ55449.1;Name=ABJ55449.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1020%3B equivalent gene in S.pneumoniae R6 %3D spr0924%3B identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019;gbkey=CDS;gene=prfA;locus_tag=SPD_0906;product=peptide chain release factor 1;protein_id=ABJ55449.1;transl_table=11
CP000410.2	Genbank	gene	918897	919736	.	+	.	ID=gene-SPD_0907;Name=hemK;gbkey=Gene;gene=hemK;gene_biotype=protein_coding;locus_tag=SPD_0907
CP000410.2	Genbank	CDS	918897	919736	.	+	0	ID=cds-ABJ55476.1;Parent=gene-SPD_0907;Dbxref=NCBI_GP:ABJ55476.1;Name=ABJ55476.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1021%3B equivalent gene in S.pneumoniae R6 %3D spr0925%3B identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536;gbkey=CDS;gene=hemK;locus_tag=SPD_0907;product=HemK protein;protein_id=ABJ55476.1;transl_table=11
CP000410.2	Genbank	gene	919720	920322	.	+	.	ID=gene-SPD_0908;Name=SPD_0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0908
CP000410.2	Genbank	CDS	919720	920322	.	+	0	ID=cds-ABJ54757.1;Parent=gene-SPD_0908;Dbxref=NCBI_GP:ABJ54757.1;Name=ABJ54757.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1022%3B equivalent gene in S.pneumoniae R6 %3D spr0926%3B identified by match to protein family HMM PF01300%3B match to protein family HMM TIGR00057;gbkey=CDS;locus_tag=SPD_0908;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=ABJ54757.1;transl_table=11
CP000410.2	Genbank	gene	920324	920755	.	+	.	ID=gene-SPD_0909;Name=SPD_0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0909
CP000410.2	Genbank	CDS	920324	920755	.	+	0	ID=cds-ABJ53684.1;Parent=gene-SPD_0909;Dbxref=NCBI_GP:ABJ53684.1;Name=ABJ53684.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1023%3B equivalent gene in S.pneumoniae R6 %3D spr0927%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0909;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ53684.1;transl_table=11
CP000410.2	Genbank	gene	920817	922073	.	+	.	ID=gene-SPD_0910;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=SPD_0910
CP000410.2	Genbank	CDS	920817	922073	.	+	0	ID=cds-ABJ55301.1;Parent=gene-SPD_0910;Dbxref=NCBI_GP:ABJ55301.1;Name=ABJ55301.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1024%3B equivalent gene in S.pneumoniae R6 %3D spr0928%3B identified by match to protein family HMM PF00464%3B match to protein family HMM PF01212;gbkey=CDS;gene=glyA;locus_tag=SPD_0910;product=serine hydroxymethyltransferase;protein_id=ABJ55301.1;transl_table=11
CP000410.2	Genbank	gene	922048	923055	.	+	.	ID=gene-SPD_0911;Name=SPD_0911;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0911
CP000410.2	Genbank	CDS	922048	923055	.	+	0	ID=cds-ABJ54474.1;Parent=gene-SPD_0911;Dbxref=NCBI_GP:ABJ54474.1;Name=ABJ54474.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1025%3B equivalent gene in S.pneumoniae R6 %3D spr0929;gbkey=CDS;locus_tag=SPD_0911;product=hypothetical protein;protein_id=ABJ54474.1;transl_table=11
CP000410.2	Genbank	gene	923055	923669	.	+	.	ID=gene-SPD_0912;Name=pvaA;gbkey=Gene;gene=pvaA;gene_biotype=protein_coding;locus_tag=SPD_0912
CP000410.2	Genbank	CDS	923055	923669	.	+	0	ID=cds-ABJ55097.1;Parent=gene-SPD_0912;Dbxref=NCBI_GP:ABJ55097.1;Name=ABJ55097.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1026%3B equivalent gene in S.pneumoniae R6 %3D spr0930;gbkey=CDS;gene=pvaA;locus_tag=SPD_0912;product=pneumococcal vaccine antigen A;protein_id=ABJ55097.1;transl_table=11
CP000410.2	Genbank	gene	923743	924717	.	+	.	ID=gene-SPD_0913;Name=SPD_0913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0913
CP000410.2	Genbank	CDS	923743	924717	.	+	0	ID=cds-ABJ55192.1;Parent=gene-SPD_0913;Dbxref=NCBI_GP:ABJ55192.1;Name=ABJ55192.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1027%3B equivalent gene in S.pneumoniae R6 %3D spr0931%3B identified by match to protein family HMM PF06207;gbkey=CDS;locus_tag=SPD_0913;product=hypothetical protein;protein_id=ABJ55192.1;transl_table=11
CP000410.2	Genbank	gene	924791	926422	.	+	.	ID=gene-SPD_0914;Name=rumA-1;gbkey=Gene;gene=rumA-1;gene_biotype=protein_coding;locus_tag=SPD_0914
CP000410.2	Genbank	CDS	924791	926422	.	+	0	ID=cds-ABJ54103.1;Parent=gene-SPD_0914;Dbxref=NCBI_GP:ABJ54103.1;Name=ABJ54103.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1029%3B equivalent gene in S.pneumoniae R6 %3D spr0932%3B identified by match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479;gbkey=CDS;gene=rumA-1;locus_tag=SPD_0914;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=ABJ54103.1;transl_table=11
CP000410.2	Genbank	gene	927771	928796	.	+	.	ID=gene-SPD_0915;Name=SPD_0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0915
CP000410.2	Genbank	CDS	927771	928796	.	+	0	ID=cds-ABJ55464.1;Parent=gene-SPD_0915;Dbxref=NCBI_GP:ABJ55464.1;Name=ABJ55464.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1032%3B equivalent gene in S.pneumoniae R6 %3D spr0934%3B identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=SPD_0915;product=iron-compound ABC transporter%2C iron compound-binding protein;protein_id=ABJ55464.1;transl_table=11
CP000410.2	Genbank	gene	928786	929793	.	+	.	ID=gene-SPD_0916;Name=SPD_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0916
CP000410.2	Genbank	CDS	928786	929793	.	+	0	ID=cds-ABJ54761.1;Parent=gene-SPD_0916;Dbxref=NCBI_GP:ABJ54761.1;Name=ABJ54761.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1033%3B equivalent gene in S.pneumoniae R6 %3D spr0935%3B identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=SPD_0916;product=iron-compound ABC transporter%2C permease protein;protein_id=ABJ54761.1;transl_table=11
CP000410.2	Genbank	gene	929793	930800	.	+	.	ID=gene-SPD_0917;Name=SPD_0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0917
CP000410.2	Genbank	CDS	929793	930800	.	+	0	ID=cds-ABJ55013.1;Parent=gene-SPD_0917;Dbxref=NCBI_GP:ABJ55013.1;Name=ABJ55013.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1034%3B equivalent gene in S.pneumoniae R6 %3D spr0936%3B identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=SPD_0917;product=iron-compound ABC transporter%2C permease protein;protein_id=ABJ55013.1;transl_table=11
CP000410.2	Genbank	gene	930800	931594	.	+	.	ID=gene-SPD_0918;Name=SPD_0918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0918
CP000410.2	Genbank	CDS	930800	931594	.	+	0	ID=cds-ABJ53782.1;Parent=gene-SPD_0918;Dbxref=NCBI_GP:ABJ53782.1;Name=ABJ53782.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1035%3B equivalent gene in S.pneumoniae R6 %3D spr0938%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0918;product=iron-compound ABC transporter%2C ATP-binding protein;protein_id=ABJ53782.1;transl_table=11
CP000410.2	Genbank	gene	932496	932651	.	+	.	ID=gene-SPD_0919;Name=SPD_0919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0919
CP000410.2	Genbank	CDS	932496	932651	.	+	0	ID=cds-ABJ55266.1;Parent=gene-SPD_0919;Dbxref=NCBI_GP:ABJ55266.1;Name=ABJ55266.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1038%3B equivalent gene in S.pneumoniae R6 %3D spr0940;gbkey=CDS;locus_tag=SPD_0919;product=hypothetical protein;protein_id=ABJ55266.1;transl_table=11
CP000410.2	Genbank	gene	933335	933496	.	+	.	ID=gene-SPD_0920;Name=SPD_0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0920
CP000410.2	Genbank	CDS	933335	933496	.	+	0	ID=cds-ABJ54230.1;Parent=gene-SPD_0920;Dbxref=NCBI_GP:ABJ54230.1;Name=ABJ54230.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1039%3B equivalent gene in S.pneumoniae R6 %3D spr0941;gbkey=CDS;locus_tag=SPD_0920;product=hypothetical protein;protein_id=ABJ54230.1;transl_table=11
CP000410.2	Genbank	gene	933588	935267	.	+	.	ID=gene-SPD_0921;Name=SPD_0921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0921
CP000410.2	Genbank	CDS	933588	935267	.	+	0	ID=cds-ABJ53629.1;Parent=gene-SPD_0921;Dbxref=NCBI_GP:ABJ53629.1;Name=ABJ53629.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1040%3B equivalent gene in S.pneumoniae R6 %3D spr0942%3B identified by match to protein family HMM PF00239%3B match to protein family HMM PF07508;gbkey=CDS;locus_tag=SPD_0921;product=site-specific recombinase%2C resolvase family protein;protein_id=ABJ53629.1;transl_table=11
CP000410.2	Genbank	gene	935490	936101	.	+	.	ID=gene-SPD_0922;Name=SPD_0922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0922
CP000410.2	Genbank	CDS	935490	936101	.	+	0	ID=cds-ABJ54963.1;Parent=gene-SPD_0922;Dbxref=NCBI_GP:ABJ54963.1;Name=ABJ54963.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1041%3B equivalent gene in S.pneumoniae R6 %3D spr0943;gbkey=CDS;locus_tag=SPD_0922;product=hypothetical protein;protein_id=ABJ54963.1;transl_table=11
CP000410.2	Genbank	gene	936414	936611	.	+	.	ID=gene-SPD_0923;Name=SPD_0923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0923
CP000410.2	Genbank	CDS	936414	936611	.	+	0	ID=cds-ABJ54162.1;Parent=gene-SPD_0923;Dbxref=NCBI_GP:ABJ54162.1;Name=ABJ54162.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1042%3B equivalent gene in S.pneumoniae R6 %3D spr0944;gbkey=CDS;locus_tag=SPD_0923;product=hypothetical protein;protein_id=ABJ54162.1;transl_table=11
CP000410.2	Genbank	gene	936673	937488	.	+	.	ID=gene-SPD_0924;Name=SPD_0924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0924
CP000410.2	Genbank	CDS	936673	937488	.	+	0	ID=cds-ABJ55278.1;Parent=gene-SPD_0924;Dbxref=NCBI_GP:ABJ55278.1;Name=ABJ55278.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1043%3B equivalent gene in S.pneumoniae R6 %3D spr0945;gbkey=CDS;locus_tag=SPD_0924;product=hypothetical protein;protein_id=ABJ55278.1;transl_table=11
CP000410.2	Genbank	gene	937488	938342	.	+	.	ID=gene-SPD_0925;Name=SPD_0925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0925
CP000410.2	Genbank	CDS	937488	938342	.	+	0	ID=cds-ABJ54362.1;Parent=gene-SPD_0925;Dbxref=NCBI_GP:ABJ54362.1;Name=ABJ54362.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1044%3B equivalent gene in S.pneumoniae R6 %3D spr0946%3B identified by match to protein family HMM PF03747;gbkey=CDS;locus_tag=SPD_0925;product=hydrolase%2C putative;protein_id=ABJ54362.1;transl_table=11
CP000410.2	Genbank	gene	938454	939338	.	+	.	ID=gene-SPD_0926;Name=SPD_0926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0926
CP000410.2	Genbank	CDS	938454	939338	.	+	0	ID=cds-ABJ55420.1;Parent=gene-SPD_0926;Dbxref=NCBI_GP:ABJ55420.1;Name=ABJ55420.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1045%3B equivalent gene in S.pneumoniae R6 %3D spr0947%3B identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147;gbkey=CDS;locus_tag=SPD_0926;product=conserved hypothetical protein TIGR00147;protein_id=ABJ55420.1;transl_table=11
CP000410.2	Genbank	gene	939477	941240	.	+	.	ID=gene-SPD_0927;Name=nplT;gbkey=Gene;gene=nplT;gene_biotype=protein_coding;locus_tag=SPD_0927
CP000410.2	Genbank	CDS	939477	941240	.	+	0	ID=cds-ABJ55002.1;Parent=gene-SPD_0927;Dbxref=NCBI_GP:ABJ55002.1;Name=ABJ55002.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0948%3B identified by match to protein family HMM PF00128%3B match to protein family HMM PF02903;gbkey=CDS;gene=nplT;locus_tag=SPD_0927;product=Neopullulanase;protein_id=ABJ55002.1;transl_table=11
CP000410.2	Genbank	gene	941326	941643	.	+	.	ID=gene-SPD_0928;Name=SPD_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0928
CP000410.2	Genbank	CDS	941326	941643	.	+	0	ID=cds-ABJ54019.1;Parent=gene-SPD_0928;Dbxref=NCBI_GP:ABJ54019.1;Name=ABJ54019.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1047%3B equivalent gene in S.pneumoniae R6 %3D spr0949;gbkey=CDS;locus_tag=SPD_0928;product=hypothetical protein;protein_id=ABJ54019.1;transl_table=11
CP000410.2	Genbank	gene	941689	941970	.	+	.	ID=gene-SPD_0929;Name=SPD_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0929
CP000410.2	Genbank	CDS	941689	941970	.	+	0	ID=cds-ABJ54184.1;Parent=gene-SPD_0929;Dbxref=NCBI_GP:ABJ54184.1;Name=ABJ54184.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1048%3B equivalent gene in S.pneumoniae R6 %3D spr0950;gbkey=CDS;locus_tag=SPD_0929;product=hypothetical protein;protein_id=ABJ54184.1;transl_table=11
CP000410.2	Genbank	gene	942415	942891	.	+	.	ID=gene-SPD_0930;Name=SPD_0930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0930
CP000410.2	Genbank	CDS	942415	942891	.	+	0	ID=cds-ABJ54256.1;Parent=gene-SPD_0930;Dbxref=NCBI_GP:ABJ54256.1;Name=ABJ54256.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1050%3B equivalent gene in S.pneumoniae R6 %3D spr0951%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_0930;product=transcriptional regulator%2C putative;protein_id=ABJ54256.1;transl_table=11
CP000410.2	Genbank	gene	942891	943652	.	+	.	ID=gene-SPD_0931;Name=SPD_0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0931
CP000410.2	Genbank	CDS	942891	943652	.	+	0	ID=cds-ABJ53862.1;Parent=gene-SPD_0931;Dbxref=NCBI_GP:ABJ53862.1;Name=ABJ53862.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1051%3B equivalent gene in S.pneumoniae R6 %3D spr0952%3B identified by match to protein family HMM PF06414;gbkey=CDS;locus_tag=SPD_0931;product=hypothetical protein;protein_id=ABJ53862.1;transl_table=11
CP000410.2	Genbank	gene	943680	944456	.	+	.	ID=gene-SPD_0932;Name=SPD_0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0932
CP000410.2	Genbank	CDS	943680	944456	.	+	0	ID=cds-ABJ54937.1;Parent=gene-SPD_0932;Dbxref=NCBI_GP:ABJ54937.1;Name=ABJ54937.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1052%3B equivalent gene in S.pneumoniae R6 %3D spr0953;gbkey=CDS;locus_tag=SPD_0932;product=hypothetical protein;protein_id=ABJ54937.1;transl_table=11
CP000410.2	Genbank	gene	944384	944836	.	+	.	ID=gene-SPD_0933;Name=SPD_0933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0933
CP000410.2	Genbank	CDS	944384	944836	.	+	0	ID=cds-ABJ54700.1;Parent=gene-SPD_0933;Dbxref=NCBI_GP:ABJ54700.1;Name=ABJ54700.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1053%3B equivalent gene in S.pneumoniae R6 %3D spr0954;gbkey=CDS;locus_tag=SPD_0933;product=hypothetical protein;protein_id=ABJ54700.1;transl_table=11
CP000410.2	Genbank	gene	945668	946027	.	+	.	ID=gene-SPD_0934;Name=SPD_0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0934
CP000410.2	Genbank	CDS	945668	946027	.	+	0	ID=cds-ABJ53795.1;Parent=gene-SPD_0934;Dbxref=NCBI_GP:ABJ53795.1;Name=ABJ53795.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0955%3B Orf 10;gbkey=CDS;locus_tag=SPD_0934;product=Tn5252- family protein;protein_id=ABJ53795.1;transl_table=11
CP000410.2	Genbank	gene	946037	946366	.	+	.	ID=gene-SPD_0935;Name=SPD_0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0935
CP000410.2	Genbank	CDS	946037	946366	.	+	0	ID=cds-ABJ55328.1;Parent=gene-SPD_0935;Dbxref=NCBI_GP:ABJ55328.1;Name=ABJ55328.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0956%3B identified by match to protein family HMM PF05713%3B Orf9;gbkey=CDS;locus_tag=SPD_0935;product=Tn5252-family protein;protein_id=ABJ55328.1;transl_table=11
CP000410.2	Genbank	gene	946389	947006	.	+	.	ID=gene-SPD_0936;Name=SPD_0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0936
CP000410.2	Genbank	CDS	946389	947006	.	+	0	ID=cds-ABJ54503.1;Parent=gene-SPD_0936;Dbxref=NCBI_GP:ABJ54503.1;Name=ABJ54503.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0957%3B identified by match to protein family HMM PF03432;gbkey=CDS;locus_tag=SPD_0936;product=Tn5252-family relaxase;protein_id=ABJ54503.1;transl_table=11
CP000410.2	Genbank	pseudogene	947097	947594	.	+	.	ID=gene-SPD_0937;Name=SPD_0937;Note=equivalent gene in S.pneumoniae R6 %3D spr0958%3B Tn5252%2C relaxase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0937;pseudo=true
CP000410.2	Genbank	gene	947687	948274	.	+	.	ID=gene-SPD_0938;Name=SPD_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0938
CP000410.2	Genbank	CDS	947687	948274	.	+	0	ID=cds-ABJ54054.1;Parent=gene-SPD_0938;Dbxref=NCBI_GP:ABJ54054.1;Name=ABJ54054.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0959;gbkey=CDS;locus_tag=SPD_0938;product=hypothetical protein;protein_id=ABJ54054.1;transl_table=11
CP000410.2	Genbank	gene	948319	949173	.	-	.	ID=gene-SPD_0939;Name=SPD_0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0939
CP000410.2	Genbank	CDS	948319	949173	.	-	0	ID=cds-ABJ54684.1;Parent=gene-SPD_0939;Dbxref=NCBI_GP:ABJ54684.1;Name=ABJ54684.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0960%3B identified by match to protein family HMM TIGR01716;gbkey=CDS;locus_tag=SPD_0939;product=transcriptional activator%2C Rgg/GadR/MutR family protein;protein_id=ABJ54684.1;transl_table=11
CP000410.2	Genbank	gene	949425	950720	.	+	.	ID=gene-SPD_0940;Name=SPD_0940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0940
CP000410.2	Genbank	CDS	949425	950720	.	+	0	ID=cds-ABJ53975.1;Parent=gene-SPD_0940;Dbxref=NCBI_GP:ABJ53975.1;Name=ABJ53975.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0961%3B identified by match to protein family HMM PF00984%3B match to protein family HMM PF03720%3B match to protein family HMM PF03721;gbkey=CDS;locus_tag=SPD_0940;product=UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase%2C putative;protein_id=ABJ53975.1;transl_table=11
CP000410.2	Genbank	gene	950722	951330	.	+	.	ID=gene-SPD_0941;Name=SPD_0941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0941
CP000410.2	Genbank	CDS	950722	951330	.	+	0	ID=cds-ABJ54854.1;Parent=gene-SPD_0941;Dbxref=NCBI_GP:ABJ54854.1;Name=ABJ54854.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0962;gbkey=CDS;locus_tag=SPD_0941;product=hypothetical protein;protein_id=ABJ54854.1;transl_table=11
CP000410.2	Genbank	gene	951340	952122	.	+	.	ID=gene-SPD_0942;Name=SPD_0942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0942
CP000410.2	Genbank	CDS	951340	952122	.	+	0	ID=cds-ABJ53781.1;Parent=gene-SPD_0942;Dbxref=NCBI_GP:ABJ53781.1;Name=ABJ53781.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0963%3B identified by match to protein family HMM PF01261;gbkey=CDS;locus_tag=SPD_0942;product=hypothetical protein;protein_id=ABJ53781.1;transl_table=11
CP000410.2	Genbank	gene	952145	954037	.	+	.	ID=gene-SPD_0943;Name=SPD_0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0943
CP000410.2	Genbank	CDS	952145	954037	.	+	0	ID=cds-ABJ55334.1;Parent=gene-SPD_0943;Dbxref=NCBI_GP:ABJ55334.1;Name=ABJ55334.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0964;gbkey=CDS;locus_tag=SPD_0943;product=hypothetical protein;protein_id=ABJ55334.1;transl_table=11
CP000410.2	Genbank	gene	954066	955172	.	+	.	ID=gene-SPD_0944;Name=SPD_0944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0944
CP000410.2	Genbank	CDS	954066	955172	.	+	0	ID=cds-ABJ53767.1;Parent=gene-SPD_0944;Dbxref=NCBI_GP:ABJ53767.1;Name=ABJ53767.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0965;gbkey=CDS;locus_tag=SPD_0944;product=hypothetical protein;protein_id=ABJ53767.1;transl_table=11
CP000410.2	Genbank	gene	955180	956490	.	+	.	ID=gene-SPD_0945;Name=SPD_0945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0945
CP000410.2	Genbank	CDS	955180	956490	.	+	0	ID=cds-ABJ54827.1;Parent=gene-SPD_0945;Dbxref=NCBI_GP:ABJ54827.1;Name=ABJ54827.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0966%3B identified by match to protein family HMM PF00501;gbkey=CDS;locus_tag=SPD_0945;product=AMP-binding enzyme%2C putative;protein_id=ABJ54827.1;transl_table=11
CP000410.2	Genbank	gene	956492	957715	.	+	.	ID=gene-SPD_0946;Name=SPD_0946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0946
CP000410.2	Genbank	CDS	956492	957715	.	+	0	ID=cds-ABJ54005.1;Parent=gene-SPD_0946;Dbxref=NCBI_GP:ABJ54005.1;Name=ABJ54005.1;Note=This gene has a tRNA synthetase class II core domain (G%2C H%2C P%2C S and T) protein equivalent gene in S.pneumoniae R6 spr0967%3B identified by match to protein family HMM PF00587;gbkey=CDS;locus_tag=SPD_0946;product=hypothetical protein;protein_id=ABJ54005.1;transl_table=11
CP000410.2	Genbank	gene	957720	958655	.	+	.	ID=gene-SPD_0947;Name=SPD_0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0947
CP000410.2	Genbank	CDS	957720	958655	.	+	0	ID=cds-ABJ54194.1;Parent=gene-SPD_0947;Dbxref=NCBI_GP:ABJ54194.1;Name=ABJ54194.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0968;gbkey=CDS;locus_tag=SPD_0947;product=membrane protein%2C putative;protein_id=ABJ54194.1;transl_table=11
CP000410.2	Genbank	gene	958670	959869	.	+	.	ID=gene-SPD_0948;Name=SPD_0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0948
CP000410.2	Genbank	CDS	958670	959869	.	+	0	ID=cds-ABJ55285.1;Parent=gene-SPD_0948;Dbxref=NCBI_GP:ABJ55285.1;Name=ABJ55285.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0969%3B identified by match to protein family HMM PF02655;gbkey=CDS;locus_tag=SPD_0948;product=hypothetical protein;protein_id=ABJ55285.1;transl_table=11
CP000410.2	Genbank	gene	959933	960532	.	+	.	ID=gene-SPD_0949;Name=SPD_0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0949
CP000410.2	Genbank	CDS	959933	960532	.	+	0	ID=cds-ABJ54337.1;Parent=gene-SPD_0949;Dbxref=NCBI_GP:ABJ54337.1;Name=ABJ54337.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0970%3B identified by match to protein family HMM PF00132;gbkey=CDS;locus_tag=SPD_0949;product=bacterial transferase hexapeptide (three repeats)%2C putative;protein_id=ABJ54337.1;transl_table=11
CP000410.2	Genbank	gene	960915	962126	.	+	.	ID=gene-SPD_0950;Name=SPD_0950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0950
CP000410.2	Genbank	CDS	960915	962126	.	+	0	ID=cds-ABJ53827.1;Parent=gene-SPD_0950;Dbxref=NCBI_GP:ABJ53827.1;Name=ABJ53827.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0971%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_0950;product=transporter%2C major facilitator family protein;protein_id=ABJ53827.1;transl_table=11
CP000410.2	Genbank	gene	962785	963006	.	+	.	ID=gene-SPD_0951;Name=SPD_0951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0951
CP000410.2	Genbank	CDS	962785	963006	.	+	0	ID=cds-ABJ54236.1;Parent=gene-SPD_0951;Dbxref=NCBI_GP:ABJ54236.1;Name=ABJ54236.1;Note=equivalent gene in S.pneumoniae R6 %3D spr0972%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_0951;product=hypothetical protein;protein_id=ABJ54236.1;transl_table=11
CP000410.2	Genbank	gene	963908	965137	.	+	.	ID=gene-SPD_0952;Name=SPD_0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0952
CP000410.2	Genbank	CDS	963908	965137	.	+	0	ID=cds-ABJ55515.1;Parent=gene-SPD_0952;Dbxref=NCBI_GP:ABJ55515.1;Name=ABJ55515.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1067%3B equivalent gene in S.pneumoniae R6 %3D spr0973%3B identified by match to protein family HMM PF01098;gbkey=CDS;locus_tag=SPD_0952;product=cell division protein FtsW%2C putative;protein_id=ABJ55515.1;transl_table=11
CP000410.2	Genbank	gene	965157	967853	.	+	.	ID=gene-SPD_0953;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=SPD_0953
CP000410.2	Genbank	CDS	965157	967853	.	+	0	ID=cds-ABJ54336.1;Parent=gene-SPD_0953;Dbxref=NCBI_GP:ABJ54336.1;Name=ABJ54336.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1068%3B equivalent gene in S.pneumoniae R6 %3D spr0974%3B identified by match to protein family HMM PF00311;gbkey=CDS;gene=ppc;locus_tag=SPD_0953;product=phosphoenolpyruvate carboxylase;protein_id=ABJ54336.1;transl_table=11
CP000410.2	Genbank	gene	968236	969270	.	+	.	ID=gene-SPD_0954;Name=SPD_0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0954
CP000410.2	Genbank	CDS	968236	969270	.	+	0	ID=cds-ABJ55418.1;Parent=gene-SPD_0954;Dbxref=NCBI_GP:ABJ55418.1;Name=ABJ55418.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1069%3B equivalent gene in S.pneumoniae R6 %3D spr0975%3B identified by match to protein family HMM PF04392;gbkey=CDS;locus_tag=SPD_0954;product=hypothetical protein;protein_id=ABJ55418.1;transl_table=11
CP000410.2	Genbank	gene	969339	970205	.	+	.	ID=gene-SPD_0955;Name=SPD_0955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0955
CP000410.2	Genbank	CDS	969339	970205	.	+	0	ID=cds-ABJ53625.1;Parent=gene-SPD_0955;Dbxref=NCBI_GP:ABJ53625.1;Name=ABJ53625.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1070%3B equivalent gene in S.pneumoniae R6 %3D spr0976%3B identified by match to protein family HMM PF02653;gbkey=CDS;locus_tag=SPD_0955;product=amino acid or sugar ABC transport system permease protein;protein_id=ABJ53625.1;transl_table=11
CP000410.2	Genbank	gene	970202	970960	.	+	.	ID=gene-SPD_0956;Name=SPD_0956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0956
CP000410.2	Genbank	CDS	970202	970960	.	+	0	ID=cds-ABJ54713.1;Parent=gene-SPD_0956;Dbxref=NCBI_GP:ABJ54713.1;Name=ABJ54713.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1071%3B equivalent gene in S.pneumoniae R6 %3D spr0977%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0956;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54713.1;transl_table=11
CP000410.2	Genbank	gene	971050	972810	.	+	.	ID=gene-SPD_0957;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SPD_0957
CP000410.2	Genbank	CDS	971050	972810	.	+	0	ID=cds-ABJ53893.1;Parent=gene-SPD_0957;Dbxref=NCBI_GP:ABJ53893.1;Name=ABJ53893.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1072%3B equivalent gene in S.pneumoniae R6 %3D spr0978%3B identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM TIGR01391;gbkey=CDS;gene=dnaG;locus_tag=SPD_0957;product=DNA primase;protein_id=ABJ53893.1;transl_table=11
CP000410.2	Genbank	gene	972813	973922	.	+	.	ID=gene-SPD_0958;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=SPD_0958
CP000410.2	Genbank	CDS	972813	973922	.	+	0	ID=cds-ABJ54934.1;Parent=gene-SPD_0958;Dbxref=NCBI_GP:ABJ54934.1;Name=ABJ54934.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1073%3B equivalent gene in S.pneumoniae R6 %3D spr0979%3B identified by match to protein family HMM PF00140%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=rpoD;locus_tag=SPD_0958;product=RNA polymerase sigma-70 factor;protein_id=ABJ54934.1;transl_table=11
CP000410.2	Genbank	gene	973936	974265	.	+	.	ID=gene-SPD_0959;Name=SPD_0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0959
CP000410.2	Genbank	CDS	973936	974265	.	+	0	ID=cds-ABJ55092.1;Parent=gene-SPD_0959;Dbxref=NCBI_GP:ABJ55092.1;Name=ABJ55092.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1074%3B equivalent gene in S.pneumoniae R6 %3D spr0980%3B identified by match to protein family HMM PF01883;gbkey=CDS;locus_tag=SPD_0959;product=hypothetical protein;protein_id=ABJ55092.1;transl_table=11
CP000410.2	Genbank	gene	974299	975423	.	+	.	ID=gene-SPD_0960;Name=cpoA;gbkey=Gene;gene=cpoA;gene_biotype=protein_coding;locus_tag=SPD_0960
CP000410.2	Genbank	CDS	974299	975423	.	+	0	ID=cds-ABJ55061.1;Parent=gene-SPD_0960;Dbxref=NCBI_GP:ABJ55061.1;Name=ABJ55061.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1075%3B equivalent gene in S.pneumoniae R6 %3D spr0981%3B identified by match to protein family HMM PF00534;gbkey=CDS;gene=cpoA;locus_tag=SPD_0960;product=glycosyl transferase CpoA;protein_id=ABJ55061.1;transl_table=11
CP000410.2	Genbank	gene	975439	976764	.	+	.	ID=gene-SPD_0961;Name=SPD_0961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0961
CP000410.2	Genbank	CDS	975439	976764	.	+	0	ID=cds-ABJ53775.1;Parent=gene-SPD_0961;Dbxref=NCBI_GP:ABJ53775.1;Name=ABJ53775.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1076%3B equivalent gene in S.pneumoniae R6 %3D spr0982%3B identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=SPD_0961;product=glycosyl transferase%2C group 1;protein_id=ABJ53775.1;transl_table=11
CP000410.2	Genbank	gene	976795	976971	.	+	.	ID=gene-SPD_0962;Name=SPD_0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0962
CP000410.2	Genbank	CDS	976795	976971	.	+	0	ID=cds-ABJ54774.1;Parent=gene-SPD_0962;Dbxref=NCBI_GP:ABJ54774.1;Name=ABJ54774.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1077%3B equivalent gene in S.pneumoniae R6 %3D spr0983%3B identified by match to protein family HMM PF04024;gbkey=CDS;locus_tag=SPD_0962;product=hypothetical protein;protein_id=ABJ54774.1;transl_table=11
CP000410.2	Genbank	gene	977030	977164	.	+	.	ID=gene-SPD_0963;Name=SPD_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0963
CP000410.2	Genbank	CDS	977030	977164	.	+	0	ID=cds-ABJ54461.1;Parent=gene-SPD_0963;Dbxref=NCBI_GP:ABJ54461.1;Name=ABJ54461.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1078;gbkey=CDS;locus_tag=SPD_0963;product=hypothetical protein;protein_id=ABJ54461.1;transl_table=11
CP000410.2	Genbank	gene	977228	978538	.	+	.	ID=gene-SPD_0964;Name=SPD_0964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0964
CP000410.2	Genbank	CDS	977228	978538	.	+	0	ID=cds-ABJ53617.1;Parent=gene-SPD_0964;Dbxref=NCBI_GP:ABJ53617.1;Name=ABJ53617.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1079%3B equivalent gene in S.pneumoniae R6 %3D spr0984%3B identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR02729;gbkey=CDS;locus_tag=SPD_0964;product=GTP1/Obg family GTP-binding protein;protein_id=ABJ53617.1;transl_table=11
CP000410.2	Genbank	gene	978548	978706	.	+	.	ID=gene-SPD_0965;Name=SPD_0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0965
CP000410.2	Genbank	CDS	978548	978706	.	+	0	ID=cds-ABJ54319.1;Parent=gene-SPD_0965;Dbxref=NCBI_GP:ABJ54319.1;Name=ABJ54319.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1080%3B equivalent gene in S.pneumoniae R6 %3D spr0985;gbkey=CDS;locus_tag=SPD_0965;product=hypothetical protein;protein_id=ABJ54319.1;transl_table=11
CP000410.2	Genbank	pseudogene	978757	980059	.	-	.	ID=gene-SPD_0966;Name=SPD_0966;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1582%3B equivalent gene in S.pneumoniae R6 %3D spr0988%3B IS1167 transposase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0966;pseudo=true
CP000410.2	Genbank	gene	981328	982587	.	+	.	ID=gene-SPD_0967;Name=murA-1;gbkey=Gene;gene=murA-1;gene_biotype=protein_coding;locus_tag=SPD_0967
CP000410.2	Genbank	CDS	981328	982587	.	+	0	ID=cds-ABJ54180.1;Parent=gene-SPD_0967;Dbxref=NCBI_GP:ABJ54180.1;Name=ABJ54180.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1081%3B equivalent gene in S.pneumoniae R6 %3D spr0989%3B identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072;gbkey=CDS;gene=murA-1;locus_tag=SPD_0967;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=ABJ54180.1;transl_table=11
CP000410.2	Genbank	gene	982603	983154	.	+	.	ID=gene-SPD_0968;Name=SPD_0968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0968
CP000410.2	Genbank	CDS	982603	983154	.	+	0	ID=cds-ABJ54773.1;Parent=gene-SPD_0968;Dbxref=NCBI_GP:ABJ54773.1;Name=ABJ54773.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1082%3B equivalent gene in S.pneumoniae R6 %3D spr0990%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_0968;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54773.1;transl_table=11
CP000410.2	Genbank	gene	983147	984424	.	+	.	ID=gene-SPD_0969;Name=SPD_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0969
CP000410.2	Genbank	CDS	983147	984424	.	+	0	ID=cds-ABJ55435.1;Parent=gene-SPD_0969;Dbxref=NCBI_GP:ABJ55435.1;Name=ABJ55435.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1083%3B equivalent gene in S.pneumoniae R6 %3D spr0991%3B identified by match to protein family HMM PF00571%3B match to protein family HMM PF03061%3B match to protein family HMM PF07085;gbkey=CDS;locus_tag=SPD_0969;product=hypothetical protein;protein_id=ABJ55435.1;transl_table=11
CP000410.2	Genbank	gene	984440	985300	.	+	.	ID=gene-SPD_0970;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=SPD_0970
CP000410.2	Genbank	CDS	984440	985300	.	+	0	ID=cds-ABJ54822.1;Parent=gene-SPD_0970;Dbxref=NCBI_GP:ABJ54822.1;Name=ABJ54822.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1084%3B equivalent gene in S.pneumoniae R6 %3D spr0992%3B identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500;gbkey=CDS;gene=map;locus_tag=SPD_0970;product=methionine aminopeptidase%2C type I;protein_id=ABJ54822.1;transl_table=11
CP000410.2	Genbank	gene	985681	986079	.	+	.	ID=gene-SPD_0971;Name=SPD_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0971
CP000410.2	Genbank	CDS	985681	986079	.	+	0	ID=cds-ABJ53709.1;Parent=gene-SPD_0971;Dbxref=NCBI_GP:ABJ53709.1;Name=ABJ53709.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1310%3B equivalent gene in S.pneumoniae R6 %3D spr0993;gbkey=CDS;locus_tag=SPD_0971;product=IS1381%2C transposase OrfA;protein_id=ABJ53709.1;transl_table=11
CP000410.2	Genbank	gene	986094	986483	.	+	.	ID=gene-SPD_0972;Name=SPD_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0972
CP000410.2	Genbank	CDS	986094	986483	.	+	0	ID=cds-ABJ54882.1;Parent=gene-SPD_0972;Dbxref=NCBI_GP:ABJ54882.1;Name=ABJ54882.1;gbkey=CDS;locus_tag=SPD_0972;product=IS1381%2C transposase OrfB;protein_id=ABJ54882.1;transl_table=11
CP000410.2	Genbank	gene	986674	988965	.	+	.	ID=gene-SPD_0973;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=SPD_0973
CP000410.2	Genbank	CDS	986674	988965	.	+	0	ID=cds-ABJ54010.1;Parent=gene-SPD_0973;Dbxref=NCBI_GP:ABJ54010.1;Name=ABJ54010.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1087%3B equivalent gene in S.pneumoniae R6 %3D spr0995%3B identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01073;gbkey=CDS;gene=pcrA;locus_tag=SPD_0973;product=ATP-dependent DNA helicase PcrA;protein_id=ABJ54010.1;transl_table=11
CP000410.2	Genbank	gene	989008	989688	.	+	.	ID=gene-SPD_0975;Name=SPD_0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0975
CP000410.2	Genbank	CDS	989008	989688	.	+	0	ID=cds-ABJ54908.1;Parent=gene-SPD_0975;Dbxref=NCBI_GP:ABJ54908.1;Name=ABJ54908.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1088%3B equivalent gene in S.pneumoniae R6 %3D spr0996%3B identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608;gbkey=CDS;locus_tag=SPD_0975;product=DNA repair protein RadC;protein_id=ABJ54908.1;transl_table=11
CP000410.2	Genbank	gene	989685	990374	.	-	.	ID=gene-SPD_0974;Name=SPD_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0974
CP000410.2	Genbank	CDS	989685	990374	.	-	0	ID=cds-ABJ55311.1;Parent=gene-SPD_0974;Dbxref=NCBI_GP:ABJ55311.1;Name=ABJ55311.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1089%3B equivalent gene in S.pneumoniae R6 %3D spr0997%3B identified by match to protein family HMM PF00117%3B match to protein family HMM PF07722;gbkey=CDS;locus_tag=SPD_0974;product=class I glutamine amidotransferase%2C putative;protein_id=ABJ55311.1;transl_table=11
CP000410.2	Genbank	gene	990392	991033	.	-	.	ID=gene-SPD_0976;Name=SPD_0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0976
CP000410.2	Genbank	CDS	990392	991033	.	-	0	ID=cds-ABJ53704.1;Parent=gene-SPD_0976;Dbxref=NCBI_GP:ABJ53704.1;Name=ABJ53704.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1090%3B equivalent gene in S.pneumoniae R6 %3D spr0998%3B identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971;gbkey=CDS;locus_tag=SPD_0976;product=hypothetical protein;protein_id=ABJ53704.1;transl_table=11
CP000410.2	Genbank	gene	991116	991367	.	-	.	ID=gene-SPD_0977;Name=SPD_0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0977
CP000410.2	Genbank	CDS	991116	991367	.	-	0	ID=cds-ABJ54583.1;Parent=gene-SPD_0977;Dbxref=NCBI_GP:ABJ54583.1;Name=ABJ54583.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1092%3B equivalent gene in S.pneumoniae R6 %3D spr0999;gbkey=CDS;locus_tag=SPD_0977;product=hypothetical protein;protein_id=ABJ54583.1;transl_table=11
CP000410.2	Genbank	gene	991339	991686	.	-	.	ID=gene-SPD_0978;Name=SPD_0978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0978
CP000410.2	Genbank	CDS	991339	991686	.	-	0	ID=cds-ABJ53869.1;Parent=gene-SPD_0978;Dbxref=NCBI_GP:ABJ53869.1;Name=ABJ53869.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1093%3B equivalent gene in S.pneumoniae R6 %3D spr1000;gbkey=CDS;locus_tag=SPD_0978;product=hypothetical protein;protein_id=ABJ53869.1;transl_table=11
CP000410.2	Genbank	gene	991691	992806	.	-	.	ID=gene-SPD_0979;Name=SPD_0979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0979
CP000410.2	Genbank	CDS	991691	992806	.	-	0	ID=cds-ABJ53751.1;Parent=gene-SPD_0979;Dbxref=NCBI_GP:ABJ53751.1;Name=ABJ53751.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1094%3B equivalent gene in S.pneumoniae R6 %3D spr1001%3B identified by match to protein family HMM PF00266;gbkey=CDS;locus_tag=SPD_0979;product=aminotransferase%2C class V;protein_id=ABJ53751.1;transl_table=11
CP000410.2	Genbank	gene	992816	993775	.	-	.	ID=gene-SPD_0980;Name=prs2;gbkey=Gene;gene=prs2;gene_biotype=protein_coding;locus_tag=SPD_0980
CP000410.2	Genbank	CDS	992816	993775	.	-	0	ID=cds-ABJ55331.1;Parent=gene-SPD_0980;Dbxref=NCBI_GP:ABJ55331.1;Name=ABJ55331.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1095%3B equivalent gene in S.pneumoniae R6 %3D spr1002%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;gene=prs2;locus_tag=SPD_0980;product=ribose-phosphate pyrophosphokinase;protein_id=ABJ55331.1;transl_table=11
CP000410.2	Genbank	gene	993888	994457	.	-	.	ID=gene-SPD_0981;Name=SPD_0981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0981
CP000410.2	Genbank	CDS	993888	994457	.	-	0	ID=cds-ABJ54506.1;Parent=gene-SPD_0981;Dbxref=NCBI_GP:ABJ54506.1;Name=ABJ54506.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1096%3B equivalent gene in S.pneumoniae R6 %3D spr1003%3B identified by match to protein family HMM PF01928;gbkey=CDS;locus_tag=SPD_0981;product=adenylate cyclase%2C putative;protein_id=ABJ54506.1;transl_table=11
CP000410.2	Genbank	gene	994585	995256	.	+	.	ID=gene-SPD_0982;Name=SPD_0982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0982
CP000410.2	Genbank	CDS	994585	995256	.	+	0	ID=cds-ABJ54046.1;Parent=gene-SPD_0982;Dbxref=NCBI_GP:ABJ54046.1;Name=ABJ54046.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1097%3B equivalent gene in S.pneumoniae R6 %3D spr1004 This protein has been crystalized%3B identified by match to protein family HMM PF04607;gbkey=CDS;locus_tag=SPD_0982;product=pyrophosphokinase family protein;protein_id=ABJ54046.1;transl_table=11
CP000410.2	Genbank	gene	995240	996058	.	+	.	ID=gene-SPD_0983;Name=SPD_0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0983
CP000410.2	Genbank	CDS	995240	996058	.	+	0	ID=cds-ABJ54161.1;Parent=gene-SPD_0983;Dbxref=NCBI_GP:ABJ54161.1;Name=ABJ54161.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1098%3B equivalent gene in S.pneumoniae R6 %3D spr1005%3B identified by match to protein family HMM PF01513;gbkey=CDS;locus_tag=SPD_0983;product=inorganic polyphosphate/ATP-NAD kinase%2C putative;protein_id=ABJ54161.1;transl_table=11
CP000410.2	Genbank	gene	996055	996951	.	+	.	ID=gene-SPD_0984;Name=SPD_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0984
CP000410.2	Genbank	CDS	996055	996951	.	+	0	ID=cds-ABJ54458.1;Parent=gene-SPD_0984;Dbxref=NCBI_GP:ABJ54458.1;Name=ABJ54458.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1099%3B equivalent gene in S.pneumoniae R6 %3D spr1006%3B identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=SPD_0984;product=ribosomal large subunit pseudouridine synthase%2C RluD subfamily protein;protein_id=ABJ54458.1;transl_table=11
CP000410.2	Genbank	gene	996995	997969	.	+	.	ID=gene-SPD_0985;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=SPD_0985
CP000410.2	Genbank	CDS	996995	997969	.	+	0	ID=cds-ABJ54586.1;Parent=gene-SPD_0985;Dbxref=NCBI_GP:ABJ54586.1;Name=ABJ54586.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1100%3B equivalent gene in S.pneumoniae R6 %3D spr1007%3B identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651;gbkey=CDS;gene=pta;locus_tag=SPD_0985;product=phosphate acetyltransferase;protein_id=ABJ54586.1;transl_table=11
CP000410.2	Genbank	pseudogene	998231	999548	.	-	.	ID=gene-SPD_0986;Name=SPD_0986;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1262%3B equivalent gene in S.pneumoniae R6 %3D spr1009%3B IS1167%2C transposase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_0986;pseudo=true
CP000410.2	Genbank	gene	999730	1000029	.	-	.	ID=gene-SPD_0987;Name=SPD_0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0987
CP000410.2	Genbank	CDS	999730	1000029	.	-	0	ID=cds-ABJ54907.1;Parent=gene-SPD_0987;Dbxref=NCBI_GP:ABJ54907.1;Name=ABJ54907.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1102%3B equivalent gene in S.pneumoniae R6 %3D spr1010%3B identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103;gbkey=CDS;locus_tag=SPD_0987;product=conserved hypothetical protein TIGR00103;protein_id=ABJ54907.1;transl_table=11
CP000410.2	Genbank	gene	1000431	1001135	.	+	.	ID=gene-SPD_0988;Name=SPD_0988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0988
CP000410.2	Genbank	CDS	1000431	1001135	.	+	0	ID=cds-ABJ55149.1;Parent=gene-SPD_0988;Dbxref=NCBI_GP:ABJ55149.1;Name=ABJ55149.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1104%3B equivalent gene in S.pneumoniae R6 %3D spr1011%3B identified by match to protein family HMM PF06912;gbkey=CDS;locus_tag=SPD_0988;product=integral membrane protein;protein_id=ABJ55149.1;transl_table=11
CP000410.2	Genbank	gene	1001317	1001631	.	+	.	ID=gene-SPD_0989;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SPD_0989
CP000410.2	Genbank	CDS	1001317	1001631	.	+	0	ID=cds-ABJ55043.1;Parent=gene-SPD_0989;Dbxref=NCBI_GP:ABJ55043.1;Name=ABJ55043.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1105%3B equivalent gene in S.pneumoniae R6 %3D spr1012%3B identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061;gbkey=CDS;gene=rplU;locus_tag=SPD_0989;product=ribosomal protein L21;protein_id=ABJ55043.1;transl_table=11
CP000410.2	Genbank	gene	1001647	1001991	.	+	.	ID=gene-SPD_0990;Name=SPD_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0990
CP000410.2	Genbank	CDS	1001647	1001991	.	+	0	ID=cds-ABJ53736.1;Parent=gene-SPD_0990;Dbxref=NCBI_GP:ABJ53736.1;Name=ABJ53736.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1106%3B equivalent gene in S.pneumoniae R6 %3D spr1013%3B identified by match to protein family HMM PF04327;gbkey=CDS;locus_tag=SPD_0990;product=hypothetical protein;protein_id=ABJ53736.1;transl_table=11
CP000410.2	Genbank	gene	1002008	1002301	.	+	.	ID=gene-SPD_0991;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SPD_0991
CP000410.2	Genbank	CDS	1002008	1002301	.	+	0	ID=cds-ABJ53759.1;Parent=gene-SPD_0991;Dbxref=NCBI_GP:ABJ53759.1;Name=ABJ53759.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1107%3B equivalent gene in S.pneumoniae R6 %3D spr1014%3B identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062;gbkey=CDS;gene=rpmA;locus_tag=SPD_0991;product=ribosomal protein L27;protein_id=ABJ53759.1;transl_table=11
CP000410.2	Genbank	gene	1002647	1002817	.	-	.	ID=gene-SPD_0992;Name=SPD_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0992
CP000410.2	Genbank	CDS	1002647	1002817	.	-	0	ID=cds-ABJ54702.1;Parent=gene-SPD_0992;Dbxref=NCBI_GP:ABJ54702.1;Name=ABJ54702.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1108%3B equivalent gene in S.pneumoniae R6 %3D spr1015;gbkey=CDS;locus_tag=SPD_0992;product=hypothetical protein;protein_id=ABJ54702.1;transl_table=11
CP000410.2	Genbank	gene	1002789	1002917	.	-	.	ID=gene-SPD_0993;Name=SPD_0993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0993
CP000410.2	Genbank	CDS	1002789	1002917	.	-	0	ID=cds-ABJ54516.1;Parent=gene-SPD_0993;Dbxref=NCBI_GP:ABJ54516.1;Name=ABJ54516.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1109;gbkey=CDS;locus_tag=SPD_0993;product=hypothetical protein;protein_id=ABJ54516.1;transl_table=11
CP000410.2	Genbank	gene	1003254	1004171	.	+	.	ID=gene-SPD_0994;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=SPD_0994
CP000410.2	Genbank	CDS	1003254	1004171	.	+	0	ID=cds-ABJ55403.1;Parent=gene-SPD_0994;Dbxref=NCBI_GP:ABJ55403.1;Name=ABJ55403.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1110%3B equivalent gene in S.pneumoniae R6 %3D spr1017%3B identified by match to protein family HMM PF01467%3B match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083;gbkey=CDS;gene=ribF;locus_tag=SPD_0994;product=riboflavin biosynthesis protein RibF;protein_id=ABJ55403.1;transl_table=11
CP000410.2	Genbank	gene	1004264	1005112	.	-	.	ID=gene-SPD_0995;Name=SPD_0995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0995
CP000410.2	Genbank	CDS	1004264	1005112	.	-	0	ID=cds-ABJ54318.1;Parent=gene-SPD_0995;Dbxref=NCBI_GP:ABJ54318.1;Name=ABJ54318.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1111%3B equivalent gene in S.pneumoniae R6 %3D spr1018%3B identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=SPD_0995;product=membrane protein%2C putative;protein_id=ABJ54318.1;transl_table=11
CP000410.2	Genbank	gene	1005254	1006093	.	+	.	ID=gene-SPD_0996;Name=SPD_0996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0996
CP000410.2	Genbank	CDS	1005254	1006093	.	+	0	ID=cds-ABJ55472.1;Parent=gene-SPD_0996;Dbxref=NCBI_GP:ABJ55472.1;Name=ABJ55472.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1112%3B equivalent gene in S.pneumoniae R6 %3D spr1019%3B identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762;gbkey=CDS;locus_tag=SPD_0996;product=DegV family protein;protein_id=ABJ55472.1;transl_table=11
CP000410.2	Genbank	gene	1006199	1006474	.	+	.	ID=gene-SPD_0997;Name=hup;gbkey=Gene;gene=hup;gene_biotype=protein_coding;locus_tag=SPD_0997
CP000410.2	Genbank	CDS	1006199	1006474	.	+	0	ID=cds-ABJ54501.1;Parent=gene-SPD_0997;Dbxref=NCBI_GP:ABJ54501.1;Name=ABJ54501.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1113%3B equivalent gene in S.pneumoniae R6 %3D spr1020%3B identified by match to protein family HMM PF00216;gbkey=CDS;gene=hup;locus_tag=SPD_0997;product=DNA-binding protein HU;protein_id=ABJ54501.1;transl_table=11
CP000410.2	Genbank	gene	1006900	1008801	.	+	.	ID=gene-SPD_0998;Name=SPD_0998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0998
CP000410.2	Genbank	CDS	1006900	1008801	.	+	0	ID=cds-ABJ55070.1;Parent=gene-SPD_0998;Dbxref=NCBI_GP:ABJ55070.1;Name=ABJ55070.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1114%3B equivalent gene in S.pneumoniae R6 %3D spr1021%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_0998;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ55070.1;transl_table=11
CP000410.2	Genbank	gene	1008804	1009667	.	+	.	ID=gene-SPD_0999;Name=SPD_0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_0999
CP000410.2	Genbank	CDS	1008804	1009667	.	+	0	ID=cds-ABJ55078.1;Parent=gene-SPD_0999;Dbxref=NCBI_GP:ABJ55078.1;Name=ABJ55078.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1115%3B equivalent gene in S.pneumoniae R6 %3D spr1022%3B identified by match to protein family HMM TIGR01716;gbkey=CDS;locus_tag=SPD_0999;product=transcriptional regulator MutR%2C putative;protein_id=ABJ55078.1;transl_table=11
CP000410.2	Genbank	gene	1009747	1010925	.	+	.	ID=gene-SPD_1000;Name=SPD_1000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1000
CP000410.2	Genbank	CDS	1009747	1010925	.	+	0	ID=cds-ABJ53994.1;Parent=gene-SPD_1000;Dbxref=NCBI_GP:ABJ53994.1;Name=ABJ53994.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1116%3B equivalent gene in S.pneumoniae R6 %3D spr1023%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_1000;product=transporter%2C major facilitator family protein;protein_id=ABJ53994.1;transl_table=11
CP000410.2	Genbank	gene	1011018	1012976	.	+	.	ID=gene-SPD_1001;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SPD_1001
CP000410.2	Genbank	CDS	1011018	1012976	.	+	0	ID=cds-ABJ54766.1;Parent=gene-SPD_1001;Dbxref=NCBI_GP:ABJ54766.1;Name=ABJ54766.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1117%3B equivalent gene in S.pneumoniae R6 %3D spr1024%3B identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575;gbkey=CDS;gene=ligA;locus_tag=SPD_1001;product=DNA ligase%2C NAD-dependent;protein_id=ABJ54766.1;transl_table=11
CP000410.2	Genbank	gene	1013088	1015367	.	+	.	ID=gene-SPD_1002;Name=pulA;gbkey=Gene;gene=pulA;gene_biotype=protein_coding;locus_tag=SPD_1002
CP000410.2	Genbank	CDS	1013088	1015367	.	+	0	ID=cds-ABJ53658.1;Parent=gene-SPD_1002;Dbxref=NCBI_GP:ABJ53658.1;Name=ABJ53658.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1118%3B equivalent gene in S.pneumoniae R6 %3D spr1025%3B identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR02104;gbkey=CDS;gene=pulA;locus_tag=SPD_1002;product=pullulanase%2C type I;protein_id=ABJ53658.1;transl_table=11
CP000410.2	Genbank	gene	1015719	1015892	.	-	.	ID=gene-SPD_1003;Name=SPD_1003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1003
CP000410.2	Genbank	CDS	1015719	1015892	.	-	0	ID=cds-ABJ53986.1;Parent=gene-SPD_1003;Dbxref=NCBI_GP:ABJ53986.1;Name=ABJ53986.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1027;gbkey=CDS;locus_tag=SPD_1003;product=hypothetical protein;protein_id=ABJ53986.1;transl_table=11
CP000410.2	Genbank	gene	1015911	1017335	.	+	.	ID=gene-SPD_1004;Name=gapN;gbkey=Gene;gene=gapN;gene_biotype=protein_coding;locus_tag=SPD_1004
CP000410.2	Genbank	CDS	1015911	1017335	.	+	0	ID=cds-ABJ54819.1;Parent=gene-SPD_1004;Dbxref=NCBI_GP:ABJ54819.1;Name=ABJ54819.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1119%3B equivalent gene in S.pneumoniae R6 %3D spr1028%3B identified by match to protein family HMM PF00171;gbkey=CDS;gene=gapN;locus_tag=SPD_1004;product=glyceraldehyde-3-phosphate dehydrogenase%2C NADP-dependent;protein_id=ABJ54819.1;transl_table=11
CP000410.2	Genbank	gene	1017800	1019728	.	+	.	ID=gene-SPD_1005;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=SPD_1005
CP000410.2	Genbank	CDS	1017800	1019728	.	+	0	ID=cds-ABJ55433.1;Parent=gene-SPD_1005;Dbxref=NCBI_GP:ABJ55433.1;Name=ABJ55433.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1121%3B equivalent gene in S.pneumoniae R6 %3D spr1029%3B identified by match to protein family HMM PF00128%3B match to protein family HMM PF02922%3B match to protein family HMM TIGR01515;gbkey=CDS;gene=glgB;locus_tag=SPD_1005;product=1%2C4-alpha-glucan branching enzyme;protein_id=ABJ55433.1;transl_table=11
CP000410.2	Genbank	gene	1019718	1020860	.	+	.	ID=gene-SPD_1006;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=SPD_1006
CP000410.2	Genbank	CDS	1019718	1020860	.	+	0	ID=cds-ABJ54622.1;Parent=gene-SPD_1006;Dbxref=NCBI_GP:ABJ54622.1;Name=ABJ54622.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1122%3B equivalent gene in S.pneumoniae R6 %3D spr1030%3B identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02091;gbkey=CDS;gene=glgC;locus_tag=SPD_1006;product=glucose-1-phosphate adenylyltransferase;protein_id=ABJ54622.1;transl_table=11
CP000410.2	Genbank	gene	1020850	1021989	.	+	.	ID=gene-SPD_1007;Name=glgD;gbkey=Gene;gene=glgD;gene_biotype=protein_coding;locus_tag=SPD_1007
CP000410.2	Genbank	CDS	1020850	1021989	.	+	0	ID=cds-ABJ54557.1;Parent=gene-SPD_1007;Dbxref=NCBI_GP:ABJ54557.1;Name=ABJ54557.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1123%3B equivalent gene in S.pneumoniae R6 %3D spr1031%3B identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR02092;gbkey=CDS;gene=glgD;locus_tag=SPD_1007;product=glucose-1-phosphate adenylyltransferase%2C GlgD subunit;protein_id=ABJ54557.1;transl_table=11
CP000410.2	Genbank	gene	1021986	1023419	.	+	.	ID=gene-SPD_1008;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=SPD_1008
CP000410.2	Genbank	CDS	1021986	1023419	.	+	0	ID=cds-ABJ54779.1;Parent=gene-SPD_1008;Dbxref=NCBI_GP:ABJ54779.1;Name=ABJ54779.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1124%3B equivalent gene in S.pneumoniae R6 %3D spr1032%3B identified by match to protein family HMM PF00534%3B match to protein family HMM TIGR02095;gbkey=CDS;gene=glgA;locus_tag=SPD_1008;product=glycogen/starch synthase%2C ADP-glucose type;protein_id=ABJ54779.1;transl_table=11
CP000410.2	Genbank	pseudogene	1023478	1024123	.	+	.	ID=gene-SPD_1009;Name=serB;Note=equivalent gene in S.pneumoniae R6 %3D spr1033. The R6 and D39 versions of this gene are both frameshifted relative to orthologs%3B phosphoserine phosphatase SerB%2C degenerate;gbkey=Gene;gene=serB;gene_biotype=pseudogene;locus_tag=SPD_1009;pseudo=true
CP000410.2	Genbank	gene	1024132	1025247	.	+	.	ID=gene-SPD_1011;Name=SPD_1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1011
CP000410.2	Genbank	CDS	1024132	1025247	.	+	0	ID=cds-ABJ53663.1;Parent=gene-SPD_1011;Dbxref=NCBI_GP:ABJ53663.1;Name=ABJ53663.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1126%3B equivalent gene in S.pneumoniae R6 %3D spr1034%3B identified by match to protein family HMM PF02595%3B match to protein family HMM TIGR00045;gbkey=CDS;locus_tag=SPD_1011;product=glycerate kinase;protein_id=ABJ53663.1;transl_table=11
CP000410.2	Genbank	gene	1025244	1025690	.	-	.	ID=gene-SPD_1010;Name=SPD_1010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1010
CP000410.2	Genbank	CDS	1025244	1025690	.	-	0	ID=cds-ABJ55489.1;Parent=gene-SPD_1010;Dbxref=NCBI_GP:ABJ55489.1;Name=ABJ55489.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1127%3B equivalent gene in S.pneumoniae R6 %3D spr1035%3B identified by match to protein family HMM PF07997;gbkey=CDS;locus_tag=SPD_1010;product=hypothetical protein;protein_id=ABJ55489.1;transl_table=11
CP000410.2	Genbank	gene	1025854	1027158	.	+	.	ID=gene-SPD_1012;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SPD_1012
CP000410.2	Genbank	CDS	1025854	1027158	.	+	0	ID=cds-ABJ55064.1;Parent=gene-SPD_1012;Dbxref=NCBI_GP:ABJ55064.1;Name=ABJ55064.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1128%3B equivalent gene in S.pneumoniae R6 %3D spr1036%3B identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060;gbkey=CDS;gene=eno;locus_tag=SPD_1012;product=phosphopyruvate hydratase;protein_id=ABJ55064.1;transl_table=11
CP000410.2	Genbank	gene	1027296	1027742	.	-	.	ID=gene-SPD_1013;Name=SPD_1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1013
CP000410.2	Genbank	CDS	1027296	1027742	.	-	0	ID=cds-ABJ54248.1;Parent=gene-SPD_1013;Dbxref=NCBI_GP:ABJ54248.1;Name=ABJ54248.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1147%3B identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=SPD_1013;product=integrase/recombinase%2C phage integrase family protein;protein_id=ABJ54248.1;transl_table=11
CP000410.2	Genbank	gene	1028139	1028489	.	-	.	ID=gene-SPD_1014;Name=SPD_1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1014
CP000410.2	Genbank	CDS	1028139	1028489	.	-	0	ID=cds-ABJ54147.1;Parent=gene-SPD_1014;Dbxref=NCBI_GP:ABJ54147.1;Name=ABJ54147.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0299%3B equivalent gene in S.pneumoniae R6 %3D spr1038 In TIGR4 this gene is annotated as a truncation%3B however in R6 there are numerous near perfect copies as well as copies with a slightly longer version with a different end that is not present in either R6 or TIGR4 This indicates it may still function as a transposase%3B identified by match to protein family HMM PF01710;gbkey=CDS;locus_tag=SPD_1014;product=IS630-Spn1%2C transposase Orf1;protein_id=ABJ54147.1;transl_table=11
CP000410.2	Genbank	gene	1028990	1032289	.	+	.	ID=gene-SPD_1015;Name=rexB;gbkey=Gene;gene=rexB;gene_biotype=protein_coding;locus_tag=SPD_1015
CP000410.2	Genbank	CDS	1028990	1032289	.	+	0	ID=cds-ABJ55254.1;Parent=gene-SPD_1015;Dbxref=NCBI_GP:ABJ55254.1;Name=ABJ55254.1;Note=RexAB system found in Gram positive bacteria appears to fulfill the biological roles of RecBCD found in Gram negative bacteria. equivalent gene in S.pneumoniae TIGR4 %3D SP1151%3B equivalent gene in S.pneumoniae R6 %3D spr1039%3B identified by match to protein family HMM TIGR02774;gbkey=CDS;gene=rexB;locus_tag=SPD_1015;product=ATP-dependent exonuclease RexB;protein_id=ABJ55254.1;transl_table=11
CP000410.2	Genbank	gene	1032286	1035936	.	+	.	ID=gene-SPD_1016;Name=rexA;gbkey=Gene;gene=rexA;gene_biotype=protein_coding;locus_tag=SPD_1016
CP000410.2	Genbank	CDS	1032286	1035936	.	+	0	ID=cds-ABJ53740.1;Parent=gene-SPD_1016;Dbxref=NCBI_GP:ABJ53740.1;Name=ABJ53740.1;Note=RexAB system found in Gram positive bacteria appears to fulfill the biological roles of RecBCD found in Gram negative bacteria. equivalent gene in S.pneumoniae TIGR4 %3D SP1152%3B equivalent gene in S.pneumoniae R6 %3D spr1040%3B identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR02785;gbkey=CDS;gene=rexA;locus_tag=SPD_1016;product=exonuclease RexA;protein_id=ABJ53740.1;transl_table=11
CP000410.2	Genbank	gene	1036106	1037284	.	+	.	ID=gene-SPD_1017;Name=SPD_1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1017
CP000410.2	Genbank	CDS	1036106	1037284	.	+	0	ID=cds-ABJ55309.1;Parent=gene-SPD_1017;Dbxref=NCBI_GP:ABJ55309.1;Name=ABJ55309.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1153%3B equivalent gene in S.pneumoniae R6 %3D spr1041;gbkey=CDS;locus_tag=SPD_1017;product=hypothetical protein;protein_id=ABJ55309.1;transl_table=11
CP000410.2	Genbank	gene	1037493	1043384	.	+	.	ID=gene-SPD_1018;Name=iga;gbkey=Gene;gene=iga;gene_biotype=protein_coding;locus_tag=SPD_1018
CP000410.2	Genbank	CDS	1037493	1043384	.	+	0	ID=cds-ABJ54639.1;Parent=gene-SPD_1018;Dbxref=NCBI_GP:ABJ54639.1;Name=ABJ54639.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1042%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF04650%3B match to protein family HMM PF05342%3B match to protein family HMM PF07501%3B match to protein family HMM PF07580%3B match to protein family HMM PF07581%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168;gbkey=CDS;gene=iga;locus_tag=SPD_1018;product=immunoglobulin A1 protease precursor;protein_id=ABJ54639.1;transl_table=11
CP000410.2	Genbank	gene	1043843	1044694	.	+	.	ID=gene-SPD_1019;Name=SPD_1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1019
CP000410.2	Genbank	CDS	1043843	1044694	.	+	0	ID=cds-ABJ53742.1;Parent=gene-SPD_1019;Dbxref=NCBI_GP:ABJ53742.1;Name=ABJ53742.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1155%3B equivalent gene in S.pneumoniae R6 %3D spr1043%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00650;gbkey=CDS;locus_tag=SPD_1019;product=GTP-binding protein;protein_id=ABJ53742.1;transl_table=11
CP000410.2	Genbank	gene	1044681	1045460	.	+	.	ID=gene-SPD_1020;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SPD_1020
CP000410.2	Genbank	CDS	1044681	1045460	.	+	0	ID=cds-ABJ54270.1;Parent=gene-SPD_1020;Dbxref=NCBI_GP:ABJ54270.1;Name=ABJ54270.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1156%3B equivalent gene in S.pneumoniae R6 %3D spr1044%3B identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;locus_tag=SPD_1020;product=ribonuclease HII;protein_id=ABJ54270.1;transl_table=11
CP000410.2	Genbank	gene	1045476	1047026	.	+	.	ID=gene-SPD_1021;Name=SPD_1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1021
CP000410.2	Genbank	CDS	1045476	1047026	.	+	0	ID=cds-ABJ55444.1;Parent=gene-SPD_1021;Dbxref=NCBI_GP:ABJ55444.1;Name=ABJ55444.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1157%3B equivalent gene in S.pneumoniae R6 %3D spr1045%3B identified by match to protein family HMM PF00654%3B match to protein family HMM PF02080;gbkey=CDS;locus_tag=SPD_1021;product=voltage-gated chloride channel family protein;protein_id=ABJ55444.1;transl_table=11
CP000410.2	Genbank	gene	1047219	1047332	.	-	.	ID=gene-SPD_1022;Name=SPD_1022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1022
CP000410.2	Genbank	CDS	1047219	1047332	.	-	0	ID=cds-ABJ55258.1;Parent=gene-SPD_1022;Dbxref=NCBI_GP:ABJ55258.1;Name=ABJ55258.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1158;gbkey=CDS;locus_tag=SPD_1022;product=hypothetical protein;protein_id=ABJ55258.1;transl_table=11
CP000410.2	Genbank	gene	1047610	1048680	.	+	.	ID=gene-SPD_1023;Name=SPD_1023;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1023
CP000410.2	Genbank	CDS	1047610	1048680	.	+	0	ID=cds-ABJ54460.1;Parent=gene-SPD_1023;Dbxref=NCBI_GP:ABJ54460.1;Name=ABJ54460.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1159%3B equivalent gene in S.pneumoniae R6 %3D spr1046%3B identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=SPD_1023;product=integrase/recombinase%2C phage integrase family protein;protein_id=ABJ54460.1;transl_table=11
CP000410.2	Genbank	gene	1048753	1049742	.	-	.	ID=gene-SPD_1024;Name=SPD_1024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1024
CP000410.2	Genbank	CDS	1048753	1049742	.	-	0	ID=cds-ABJ55047.1;Parent=gene-SPD_1024;Dbxref=NCBI_GP:ABJ55047.1;Name=ABJ55047.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1160%3B equivalent gene in S.pneumoniae R6 %3D spr1047%3B identified by match to protein family HMM PF03099%3B match to protein family HMM TIGR00545;gbkey=CDS;locus_tag=SPD_1024;product=lipoate-protein ligase%2C putative;protein_id=ABJ55047.1;transl_table=11
CP000410.2	Genbank	gene	1049806	1051491	.	-	.	ID=gene-SPD_1025;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=SPD_1025
CP000410.2	Genbank	CDS	1049806	1051491	.	-	0	ID=cds-ABJ53948.1;Parent=gene-SPD_1025;Dbxref=NCBI_GP:ABJ53948.1;Name=ABJ53948.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1161%3B equivalent gene in S.pneumoniae R6 %3D spr1048%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF00364%3B match to protein family HMM PF01134%3B match to protein family HMM PF02852%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01350;gbkey=CDS;gene=lpdA;locus_tag=SPD_1025;product=dihydrolipoamide dehydrogenase;protein_id=ABJ53948.1;transl_table=11
CP000410.2	Genbank	gene	1051555	1052598	.	-	.	ID=gene-SPD_1026;Name=SPD_1026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1026
CP000410.2	Genbank	CDS	1051555	1052598	.	-	0	ID=cds-ABJ53703.1;Parent=gene-SPD_1026;Dbxref=NCBI_GP:ABJ53703.1;Name=ABJ53703.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1162%3B equivalent gene in S.pneumoniae R6 %3D spr1049%3B identified by match to protein family HMM PF00198%3B match to protein family HMM PF02817;gbkey=CDS;locus_tag=SPD_1026;product=acetoin dehydrogenase complex%2C E2 component%2C dihydrolipoamide acetyltransferase%2C putative;protein_id=ABJ53703.1;transl_table=11
CP000410.2	Genbank	gene	1052816	1053808	.	-	.	ID=gene-SPD_1027;Name=SPD_1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1027
CP000410.2	Genbank	CDS	1052816	1053808	.	-	0	ID=cds-ABJ55037.1;Parent=gene-SPD_1027;Dbxref=NCBI_GP:ABJ55037.1;Name=ABJ55037.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1163%3B equivalent gene in S.pneumoniae R6 %3D spr1050%3B identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=SPD_1027;product=acetoin dehydrogenase%2C E1 component%2C beta subunit%2C putative;protein_id=ABJ55037.1;transl_table=11
CP000410.2	Genbank	gene	1053824	1054792	.	-	.	ID=gene-SPD_1028;Name=acoA;gbkey=Gene;gene=acoA;gene_biotype=protein_coding;locus_tag=SPD_1028
CP000410.2	Genbank	CDS	1053824	1054792	.	-	0	ID=cds-ABJ54500.1;Parent=gene-SPD_1028;Dbxref=NCBI_GP:ABJ54500.1;Name=ABJ54500.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1164%3B equivalent gene in S.pneumoniae R6 %3D spr1051%3B identified by match to protein family HMM PF00676;gbkey=CDS;gene=acoA;locus_tag=SPD_1028;product=TPP-dependent acetoin dehydrogenase alpha-subunit;protein_id=ABJ54500.1;transl_table=11
CP000410.2	Genbank	gene	1054946	1056307	.	-	.	ID=gene-SPD_1029;Name=SPD_1029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1029
CP000410.2	Genbank	CDS	1054946	1056307	.	-	0	ID=cds-ABJ55362.1;Parent=gene-SPD_1029;Dbxref=NCBI_GP:ABJ55362.1;Name=ABJ55362.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1166%3B equivalent gene in S.pneumoniae R6 %3D spr1052%3B identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=SPD_1029;product=MATE efflux family protein;protein_id=ABJ55362.1;transl_table=11
CP000410.2	Genbank	gene	1056592	1057860	.	-	.	ID=gene-SPD_1030;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=SPD_1030
CP000410.2	Genbank	CDS	1056592	1057860	.	-	0	ID=cds-ABJ54106.1;Parent=gene-SPD_1030;Dbxref=NCBI_GP:ABJ54106.1;Name=ABJ54106.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1167%3B equivalent gene in S.pneumoniae R6 %3D spr1053%3B identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857;gbkey=CDS;gene=pyrC;locus_tag=SPD_1030;product=dihydroorotase;protein_id=ABJ54106.1;transl_table=11
CP000410.2	Genbank	gene	1057873	1058337	.	-	.	ID=gene-SPD_1031;Name=mutX;gbkey=Gene;gene=mutX;gene_biotype=protein_coding;locus_tag=SPD_1031
CP000410.2	Genbank	CDS	1057873	1058337	.	-	0	ID=cds-ABJ53964.1;Parent=gene-SPD_1031;Dbxref=NCBI_GP:ABJ53964.1;Name=ABJ53964.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1168%3B equivalent gene in S.pneumoniae R6 %3D spr1054%3B identified by match to protein family HMM PF00293;gbkey=CDS;gene=mutX;locus_tag=SPD_1031;product=Mutator mutT protein (7%2C8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase);protein_id=ABJ53964.1;transl_table=11
CP000410.2	Genbank	gene	1058347	1059000	.	-	.	ID=gene-SPD_1032;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=SPD_1032
CP000410.2	Genbank	CDS	1058347	1059000	.	-	0	ID=cds-ABJ55017.1;Parent=gene-SPD_1032;Dbxref=NCBI_GP:ABJ55017.1;Name=ABJ55017.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1169%3B equivalent gene in S.pneumoniae R6 %3D spr1055%3B identified by match to protein family HMM PF03167%3B match to protein family HMM TIGR00628;gbkey=CDS;gene=ung;locus_tag=SPD_1032;product=uracil-DNA glycosylase;protein_id=ABJ55017.1;transl_table=11
CP000410.2	Genbank	gene	1059136	1059783	.	-	.	ID=gene-SPD_1033;Name=SPD_1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1033
CP000410.2	Genbank	CDS	1059136	1059783	.	-	0	ID=cds-ABJ53666.1;Parent=gene-SPD_1033;Dbxref=NCBI_GP:ABJ53666.1;Name=ABJ53666.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1170%3B equivalent gene in S.pneumoniae R6 %3D spr1056;gbkey=CDS;locus_tag=SPD_1033;product=hypothetical protein;protein_id=ABJ53666.1;transl_table=11
CP000410.2	Genbank	gene	1059797	1060510	.	-	.	ID=gene-SPD_1034;Name=SPD_1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1034
CP000410.2	Genbank	CDS	1059797	1060510	.	-	0	ID=cds-ABJ54750.1;Parent=gene-SPD_1034;Dbxref=NCBI_GP:ABJ54750.1;Name=ABJ54750.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1171%3B equivalent gene in S.pneumoniae R6 %3D spr1057%3B identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549%3B match to protein family HMM TIGR02254;gbkey=CDS;locus_tag=SPD_1034;product=hydrolase%2C haloacid dehalogenase-like family protein;protein_id=ABJ54750.1;transl_table=11
CP000410.2	Genbank	gene	1060968	1061126	.	-	.	ID=gene-SPD_1035;Name=SPD_1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1035
CP000410.2	Genbank	CDS	1060968	1061126	.	-	0	ID=cds-ABJ54544.1;Parent=gene-SPD_1035;Dbxref=NCBI_GP:ABJ54544.1;Name=ABJ54544.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1173%3B equivalent gene in S.pneumoniae R6 %3D spr1058;gbkey=CDS;locus_tag=SPD_1035;product=hypothetical protein;protein_id=ABJ54544.1;transl_table=11
CP000410.2	Genbank	gene	1061196	1061348	.	-	.	ID=gene-SPD_1036;Name=SPD_1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1036
CP000410.2	Genbank	CDS	1061196	1061348	.	-	0	ID=cds-ABJ55216.1;Parent=gene-SPD_1036;Dbxref=NCBI_GP:ABJ55216.1;Name=ABJ55216.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1059;gbkey=CDS;locus_tag=SPD_1036;product=hypothetical protein;protein_id=ABJ55216.1;transl_table=11
CP000410.2	Genbank	gene	1061770	1064304	.	-	.	ID=gene-SPD_1037;Name=SPD_1037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1037
CP000410.2	Genbank	CDS	1061770	1064304	.	-	0	ID=cds-ABJ54136.1;Parent=gene-SPD_1037;Dbxref=NCBI_GP:ABJ54136.1;Name=ABJ54136.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1060%3B identified by match to protein family HMM PF04270%3B match to protein family HMM TIGR01363;gbkey=CDS;locus_tag=SPD_1037;product=histidine triad protein;protein_id=ABJ54136.1;transl_table=11
CP000410.2	Genbank	gene	1064462	1066912	.	-	.	ID=gene-SPD_1038;Name=phpA;gbkey=Gene;gene=phpA;gene_biotype=protein_coding;locus_tag=SPD_1038
CP000410.2	Genbank	CDS	1064462	1066912	.	-	0	ID=cds-ABJ55300.1;Parent=gene-SPD_1038;Dbxref=NCBI_GP:ABJ55300.1;Name=ABJ55300.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1175%3B equivalent gene in S.pneumoniae R6 %3D spr1061%3B identified by match to protein family HMM PF04270%3B match to protein family HMM TIGR01363;gbkey=CDS;gene=phpA;locus_tag=SPD_1038;product=pneumococcal histidine triad protein A precursor;protein_id=ABJ55300.1;transl_table=11
CP000410.2	Genbank	gene	1067167	1068900	.	-	.	ID=gene-SPD_1039;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=SPD_1039
CP000410.2	Genbank	CDS	1067167	1068900	.	-	0	ID=cds-ABJ54179.1;Parent=gene-SPD_1039;Dbxref=NCBI_GP:ABJ54179.1;Name=ABJ54179.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1176%3B equivalent gene in S.pneumoniae R6 %3D spr1062%3B identified by match to protein family HMM PF00391%3B match to protein family HMM PF02896%3B match to protein family HMM PF05524%3B match to protein family HMM TIGR01417;gbkey=CDS;gene=ptsI;locus_tag=SPD_1039;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=ABJ54179.1;transl_table=11
CP000410.2	Genbank	gene	1068906	1069169	.	-	.	ID=gene-SPD_1040;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=SPD_1040
CP000410.2	Genbank	CDS	1068906	1069169	.	-	0	ID=cds-ABJ55009.1;Parent=gene-SPD_1040;Dbxref=NCBI_GP:ABJ55009.1;Name=ABJ55009.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1177%3B equivalent gene in S.pneumoniae R6 %3D spr1063%3B identified by match to protein family HMM PF00381%3B match to protein family HMM TIGR01003;gbkey=CDS;gene=ptsH;locus_tag=SPD_1040;product=phosphocarrier protein HPr;protein_id=ABJ55009.1;transl_table=11
CP000410.2	Genbank	gene	1069520	1069738	.	+	.	ID=gene-SPD_1041;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=SPD_1041
CP000410.2	Genbank	CDS	1069520	1069738	.	+	0	ID=cds-ABJ55237.1;Parent=gene-SPD_1041;Dbxref=NCBI_GP:ABJ55237.1;Name=ABJ55237.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1178%3B equivalent gene in S.pneumoniae R6 %3D spr1064%3B identified by match to protein family HMM PF00462%3B match to protein family HMM TIGR02194;gbkey=CDS;gene=nrdH;locus_tag=SPD_1041;product=glutaredoxin-like protein NrdH;protein_id=ABJ55237.1;transl_table=11
CP000410.2	Genbank	gene	1069819	1071978	.	+	.	ID=gene-SPD_1042;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=SPD_1042
CP000410.2	Genbank	CDS	1069819	1071978	.	+	0	ID=cds-ABJ54369.1;Parent=gene-SPD_1042;Dbxref=NCBI_GP:ABJ54369.1;Name=ABJ54369.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1179%3B equivalent gene in S.pneumoniae R6 %3D spr1065%3B identified by match to protein family HMM PF00317%3B match to protein family HMM PF02867%3B match to protein family HMM TIGR02506;gbkey=CDS;gene=nrdE;locus_tag=SPD_1042;product=ribonucleoside-diphosphate reductase%2C alpha subunit;protein_id=ABJ54369.1;transl_table=11
CP000410.2	Genbank	gene	1072166	1073128	.	+	.	ID=gene-SPD_1043;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=SPD_1043
CP000410.2	Genbank	CDS	1072166	1073128	.	+	0	ID=cds-ABJ55458.1;Parent=gene-SPD_1043;Dbxref=NCBI_GP:ABJ55458.1;Name=ABJ55458.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1180%3B equivalent gene in S.pneumoniae R6 %3D spr1066%3B identified by match to protein family HMM PF00268;gbkey=CDS;gene=nrdF;locus_tag=SPD_1043;product=ribonucleoside-diphosphate reductase%2C beta subunit;protein_id=ABJ55458.1;transl_table=11
CP000410.2	Genbank	gene	1073310	1074071	.	+	.	ID=gene-SPD_1044;Name=lacR2;gbkey=Gene;gene=lacR2;gene_biotype=protein_coding;locus_tag=SPD_1044
CP000410.2	Genbank	CDS	1073310	1074071	.	+	0	ID=cds-ABJ54762.1;Parent=gene-SPD_1044;Dbxref=NCBI_GP:ABJ54762.1;Name=ABJ54762.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1182%3B equivalent gene in S.pneumoniae R6 %3D spr1067%3B identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;gene=lacR2;locus_tag=SPD_1044;product=lactose phosphotransferase system repressor;protein_id=ABJ54762.1;transl_table=11
CP000410.2	Genbank	gene	1074341	1074526	.	-	.	ID=gene-SPD_1045;Name=SPD_1045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1045
CP000410.2	Genbank	CDS	1074341	1074526	.	-	0	ID=cds-ABJ53958.1;Parent=gene-SPD_1045;Dbxref=NCBI_GP:ABJ53958.1;Name=ABJ53958.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1045;product=hypothetical protein;protein_id=ABJ53958.1;transl_table=11
CP000410.2	Genbank	gene	1074569	1075975	.	-	.	ID=gene-SPD_1046;Name=lacG-2;gbkey=Gene;gene=lacG-2;gene_biotype=protein_coding;locus_tag=SPD_1046
CP000410.2	Genbank	CDS	1074569	1075975	.	-	0	ID=cds-ABJ54974.1;Parent=gene-SPD_1046;Dbxref=NCBI_GP:ABJ54974.1;Name=ABJ54974.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1184%3B equivalent gene in S.pneumoniae R6 %3D spr1069%3B identified by match to protein family HMM PF00232%3B match to protein family HMM TIGR01233;gbkey=CDS;gene=lacG-2;locus_tag=SPD_1046;product=6-phospho-beta-galactosidase;protein_id=ABJ54974.1;transl_table=11
CP000410.2	Genbank	gene	1076184	1077875	.	-	.	ID=gene-SPD_1047;Name=lacE-2;gbkey=Gene;gene=lacE-2;gene_biotype=protein_coding;locus_tag=SPD_1047
CP000410.2	Genbank	CDS	1076184	1077875	.	-	0	ID=cds-ABJ53886.1;Parent=gene-SPD_1047;Dbxref=NCBI_GP:ABJ53886.1;Name=ABJ53886.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1185%3B equivalent gene in S.pneumoniae R6 %3D spr1070%3B identified by match to protein family HMM PF02302%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00394%3B match to protein family HMM TIGR00410%3B match to protein family HMM TIGR00853;gbkey=CDS;gene=lacE-2;locus_tag=SPD_1047;product=PTS system%2C lactose-specific IIBC components;protein_id=ABJ53886.1;transl_table=11
CP000410.2	Genbank	gene	1077875	1078192	.	-	.	ID=gene-SPD_1048;Name=lacF-2;gbkey=Gene;gene=lacF-2;gene_biotype=protein_coding;locus_tag=SPD_1048
CP000410.2	Genbank	CDS	1077875	1078192	.	-	0	ID=cds-ABJ54895.1;Parent=gene-SPD_1048;Dbxref=NCBI_GP:ABJ54895.1;Name=ABJ54895.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1186%3B equivalent gene in S.pneumoniae R6 %3D spr1071%3B identified by match to protein family HMM PF02255%3B match to protein family HMM TIGR00823;gbkey=CDS;gene=lacF-2;locus_tag=SPD_1048;product=PTS system%2C lactose-specific IIA component;protein_id=ABJ54895.1;transl_table=11
CP000410.2	Genbank	gene	1078228	1079064	.	-	.	ID=gene-SPD_1049;Name=lacT;gbkey=Gene;gene=lacT;gene_biotype=protein_coding;locus_tag=SPD_1049
CP000410.2	Genbank	CDS	1078228	1079064	.	-	0	ID=cds-ABJ55507.1;Parent=gene-SPD_1049;Dbxref=NCBI_GP:ABJ55507.1;Name=ABJ55507.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1187%3B equivalent gene in S.pneumoniae R6 %3D spr1072%3B identified by match to protein family HMM PF00874%3B match to protein family HMM PF03123;gbkey=CDS;gene=lacT;locus_tag=SPD_1049;product=transcription antiterminator LacT;protein_id=ABJ55507.1;transl_table=11
CP000410.2	Genbank	gene	1079298	1080278	.	-	.	ID=gene-SPD_1050;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=protein_coding;locus_tag=SPD_1050
CP000410.2	Genbank	CDS	1079298	1080278	.	-	0	ID=cds-ABJ54664.1;Parent=gene-SPD_1050;Dbxref=NCBI_GP:ABJ54664.1;Name=ABJ54664.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1190%3B equivalent gene in S.pneumoniae R6 %3D spr1073%3B identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR01232;gbkey=CDS;gene=lacD;locus_tag=SPD_1050;product=tagatose 1%2C6-diphosphate aldolase;protein_id=ABJ54664.1;transl_table=11
CP000410.2	Genbank	gene	1080280	1081209	.	-	.	ID=gene-SPD_1051;Name=lacC;gbkey=Gene;gene=lacC;gene_biotype=protein_coding;locus_tag=SPD_1051
CP000410.2	Genbank	CDS	1080280	1081209	.	-	0	ID=cds-ABJ54335.1;Parent=gene-SPD_1051;Dbxref=NCBI_GP:ABJ54335.1;Name=ABJ54335.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1191%3B equivalent gene in S.pneumoniae R6 %3D spr1074%3B identified by match to protein family HMM PF00294%3B match to protein family HMM TIGR01231;gbkey=CDS;gene=lacC;locus_tag=SPD_1051;product=tagatose-6-phosphate kinase;protein_id=ABJ54335.1;transl_table=11
CP000410.2	Genbank	gene	1081220	1081735	.	-	.	ID=gene-SPD_1052;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=SPD_1052
CP000410.2	Genbank	CDS	1081220	1081735	.	-	0	ID=cds-ABJ55425.1;Parent=gene-SPD_1052;Dbxref=NCBI_GP:ABJ55425.1;Name=ABJ55425.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1192%3B equivalent gene in S.pneumoniae R6 %3D spr1075%3B identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01119;gbkey=CDS;gene=lacB;locus_tag=SPD_1052;product=galactose-6-phosphate isomerase%2C LacB subunit;protein_id=ABJ55425.1;transl_table=11
CP000410.2	Genbank	gene	1081766	1082191	.	-	.	ID=gene-SPD_1053;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=SPD_1053
CP000410.2	Genbank	CDS	1081766	1082191	.	-	0	ID=cds-ABJ54186.1;Parent=gene-SPD_1053;Dbxref=NCBI_GP:ABJ54186.1;Name=ABJ54186.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1193%3B equivalent gene in S.pneumoniae R6 %3D spr1076%3B identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01118;gbkey=CDS;gene=lacA;locus_tag=SPD_1053;product=galactose-6-phosphate isomerase%2C LacA subunit;protein_id=ABJ54186.1;transl_table=11
CP000410.2	Genbank	gene	1082349	1082693	.	-	.	ID=gene-SPD_1054;Name=SPD_1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1054
CP000410.2	Genbank	CDS	1082349	1082693	.	-	0	ID=cds-ABJ55196.1;Parent=gene-SPD_1054;Dbxref=NCBI_GP:ABJ55196.1;Name=ABJ55196.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1194%3B equivalent gene in S.pneumoniae R6 %3D spr1077;gbkey=CDS;locus_tag=SPD_1054;product=hypothetical protein;protein_id=ABJ55196.1;transl_table=11
CP000410.2	Genbank	pseudogene	1082862	1083206	.	-	.	ID=gene-SPD_1055;Name=SPD_1055;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0538%3B equivalent gene in S.pneumoniae R6 %3D spr1078%3B IS1381%2C transposase OrfB%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1055;pseudo=true
CP000410.2	Genbank	pseudogene	1083191	1083664	.	-	.	ID=gene-SPD_1056;Name=SPD_1056;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1927%3B equivalent gene in S.pneumoniae R6 %3D spr1079%3B IS1381%2C transposase OrfA%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1056;pseudo=true
CP000410.2	Genbank	gene	1083672	1083974	.	-	.	ID=gene-SPD_1057;Name=SPD_1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1057
CP000410.2	Genbank	CDS	1083672	1083974	.	-	0	ID=cds-ABJ54843.1;Parent=gene-SPD_1057;Dbxref=NCBI_GP:ABJ54843.1;Name=ABJ54843.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1197%3B equivalent gene in S.pneumoniae R6 %3D spr1080;gbkey=CDS;locus_tag=SPD_1057;product=PTS system%2C IIB component%2C putative;protein_id=ABJ54843.1;transl_table=11
CP000410.2	Genbank	pseudogene	1084012	1084487	.	-	.	ID=gene-SPD_1058;Name=SPD_1058;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1198%3B equivalent gene in S.pneumoniae R6 %3D spr1081. The R6 version is identically degenerate while The TIGR4 version and orthologs are not%3B PTS system IIA component%2C putative%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1058;pseudo=true
CP000410.2	Genbank	gene	1084668	1084820	.	+	.	ID=gene-SPD_1059;Name=SPD_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1059
CP000410.2	Genbank	CDS	1084668	1084820	.	+	0	ID=cds-ABJ55083.1;Parent=gene-SPD_1059;Dbxref=NCBI_GP:ABJ55083.1;Name=ABJ55083.1;gbkey=CDS;locus_tag=SPD_1059;product=hypothetical protein;protein_id=ABJ55083.1;transl_table=11
CP000410.2	Genbank	gene	1084901	1086724	.	-	.	ID=gene-SPD_1060;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=SPD_1060
CP000410.2	Genbank	CDS	1084901	1086724	.	-	0	ID=cds-ABJ54524.1;Parent=gene-SPD_1060;Dbxref=NCBI_GP:ABJ54524.1;Name=ABJ54524.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1200%3B equivalent gene in S.pneumoniae R6 %3D spr1082%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393;gbkey=CDS;gene=lepA;locus_tag=SPD_1060;product=GTP-binding protein LepA;protein_id=ABJ54524.1;transl_table=11
CP000410.2	Genbank	gene	1086803	1087531	.	-	.	ID=gene-SPD_1061;Name=SPD_1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1061
CP000410.2	Genbank	CDS	1086803	1087531	.	-	0	ID=cds-ABJ54763.1;Parent=gene-SPD_1061;Dbxref=NCBI_GP:ABJ54763.1;Name=ABJ54763.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1201%3B equivalent gene in S.pneumoniae R6 %3D spr1083%3B identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=SPD_1061;product=serine/threonine protein phosphatase;protein_id=ABJ54763.1;transl_table=11
CP000410.2	Genbank	gene	1087533	1089200	.	-	.	ID=gene-SPD_1062;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=SPD_1062
CP000410.2	Genbank	CDS	1087533	1089200	.	-	0	ID=cds-ABJ55133.1;Parent=gene-SPD_1062;Dbxref=NCBI_GP:ABJ55133.1;Name=ABJ55133.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1202%3B equivalent gene in S.pneumoniae R6 %3D spr1084%3B identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634;gbkey=CDS;gene=recN;locus_tag=SPD_1062;product=DNA repair protein RecN;protein_id=ABJ55133.1;transl_table=11
CP000410.2	Genbank	gene	1089207	1089638	.	-	.	ID=gene-SPD_1063;Name=SPD_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1063
CP000410.2	Genbank	CDS	1089207	1089638	.	-	0	ID=cds-ABJ54039.1;Parent=gene-SPD_1063;Dbxref=NCBI_GP:ABJ54039.1;Name=ABJ54039.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1203%3B equivalent gene in S.pneumoniae R6 %3D spr1085%3B identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863;gbkey=CDS;locus_tag=SPD_1063;product=transcriptional regulator of arginine metabolism expression%2C putative;protein_id=ABJ54039.1;transl_table=11
CP000410.2	Genbank	gene	1089631	1090446	.	-	.	ID=gene-SPD_1064;Name=SPD_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1064
CP000410.2	Genbank	CDS	1089631	1090446	.	-	0	ID=cds-ABJ55138.1;Parent=gene-SPD_1064;Dbxref=NCBI_GP:ABJ55138.1;Name=ABJ55138.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1204%3B equivalent gene in S.pneumoniae R6 %3D spr1086%3B identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478;gbkey=CDS;locus_tag=SPD_1064;product=hemolysin A%2C putative;protein_id=ABJ55138.1;transl_table=11
CP000410.2	Genbank	gene	1090439	1091314	.	-	.	ID=gene-SPD_1065;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=SPD_1065
CP000410.2	Genbank	CDS	1090439	1091314	.	-	0	ID=cds-ABJ54300.1;Parent=gene-SPD_1065;Dbxref=NCBI_GP:ABJ54300.1;Name=ABJ54300.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1205%3B equivalent gene in S.pneumoniae R6 %3D spr1087%3B identified by match to protein family HMM PF00348;gbkey=CDS;gene=ispA;locus_tag=SPD_1065;product=geranyltranstransferase;protein_id=ABJ54300.1;transl_table=11
CP000410.2	Genbank	gene	1091311	1091523	.	-	.	ID=gene-SPD_1066;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=SPD_1066
CP000410.2	Genbank	CDS	1091311	1091523	.	-	0	ID=cds-ABJ54820.1;Parent=gene-SPD_1066;Dbxref=NCBI_GP:ABJ54820.1;Name=ABJ54820.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1206%3B equivalent gene in S.pneumoniae R6 %3D spr1088%3B identified by match to protein family HMM PF02609%3B match to protein family HMM TIGR01280;gbkey=CDS;gene=xseB;locus_tag=SPD_1066;product=exodeoxyribonuclease VII%2C small subunit;protein_id=ABJ54820.1;transl_table=11
CP000410.2	Genbank	gene	1091501	1092841	.	-	.	ID=gene-SPD_1067;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SPD_1067
CP000410.2	Genbank	CDS	1091501	1092841	.	-	0	ID=cds-ABJ53756.1;Parent=gene-SPD_1067;Dbxref=NCBI_GP:ABJ53756.1;Name=ABJ53756.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1207%3B equivalent gene in S.pneumoniae R6 %3D spr1089%3B identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237;gbkey=CDS;gene=xseA;locus_tag=SPD_1067;product=exodeoxyribonuclease VII%2C large subunit;protein_id=ABJ53756.1;transl_table=11
CP000410.2	Genbank	gene	1092969	1093607	.	-	.	ID=gene-SPD_1068;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=SPD_1068
CP000410.2	Genbank	CDS	1092969	1093607	.	-	0	ID=cds-ABJ54635.1;Parent=gene-SPD_1068;Dbxref=NCBI_GP:ABJ54635.1;Name=ABJ54635.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1208%3B equivalent gene in S.pneumoniae R6 %3D spr1090%3B identified by match to protein family HMM PF00485%3B match to protein family HMM TIGR00235;gbkey=CDS;gene=udk;locus_tag=SPD_1068;product=uridine kinase;protein_id=ABJ54635.1;transl_table=11
CP000410.2	Genbank	gene	1093715	1094017	.	-	.	ID=gene-SPD_1069;Name=SPD_1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1069
CP000410.2	Genbank	CDS	1093715	1094017	.	-	0	ID=cds-ABJ53968.1;Parent=gene-SPD_1069;Dbxref=NCBI_GP:ABJ53968.1;Name=ABJ53968.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1210%3B equivalent gene in S.pneumoniae R6 %3D spr1091;gbkey=CDS;locus_tag=SPD_1069;product=hypothetical protein;protein_id=ABJ53968.1;transl_table=11
CP000410.2	Genbank	gene	1094258	1095136	.	-	.	ID=gene-SPD_1070;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SPD_1070
CP000410.2	Genbank	CDS	1094258	1095136	.	-	0	ID=cds-ABJ54024.1;Parent=gene-SPD_1070;Dbxref=NCBI_GP:ABJ54024.1;Name=ABJ54024.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1212%3B equivalent gene in S.pneumoniae R6 %3D spr1092%3B identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431;gbkey=CDS;gene=truB;locus_tag=SPD_1070;product=tRNA pseudouridine synthase B;protein_id=ABJ54024.1;transl_table=11
CP000410.2	Genbank	gene	1095237	1098422	.	-	.	ID=gene-SPD_1071;Name=SPD_1071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1071
CP000410.2	Genbank	CDS	1095237	1098422	.	-	0	ID=cds-ABJ54865.1;Parent=gene-SPD_1071;Dbxref=NCBI_GP:ABJ54865.1;Name=ABJ54865.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1093;gbkey=CDS;locus_tag=SPD_1071;product=hypothetical protein;protein_id=ABJ54865.1;transl_table=11
CP000410.2	Genbank	gene	1098434	1099708	.	-	.	ID=gene-SPD_1072;Name=SPD_1072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1072
CP000410.2	Genbank	CDS	1098434	1099708	.	-	0	ID=cds-ABJ54242.1;Parent=gene-SPD_1072;Dbxref=NCBI_GP:ABJ54242.1;Name=ABJ54242.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1213%3B equivalent gene in S.pneumoniae R6 %3D spr1094;gbkey=CDS;locus_tag=SPD_1072;product=hypothetical protein;protein_id=ABJ54242.1;transl_table=11
CP000410.2	Genbank	gene	1099804	1100919	.	-	.	ID=gene-SPD_1073;Name=SPD_1073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1073
CP000410.2	Genbank	CDS	1099804	1100919	.	-	0	ID=cds-ABJ55103.1;Parent=gene-SPD_1073;Dbxref=NCBI_GP:ABJ55103.1;Name=ABJ55103.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1095%3B identified by match to protein family HMM PF01053%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01326;gbkey=CDS;locus_tag=SPD_1073;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=ABJ55103.1;transl_table=11
CP000410.2	Genbank	gene	1100941	1101063	.	-	.	ID=gene-SPD_1074;Name=SPD_1074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1074
CP000410.2	Genbank	CDS	1100941	1101063	.	-	0	ID=cds-ABJ55180.1;Parent=gene-SPD_1074;Dbxref=NCBI_GP:ABJ55180.1;Name=ABJ55180.1;Note=similar to a domain of the O-acetylhomoserine sulfhydrylase characterized in Leptospira meyeri. equivalent gene in S.pneumoniae R6 %3D spr1096;gbkey=CDS;locus_tag=SPD_1074;product=hypothetical protein;protein_id=ABJ55180.1;transl_table=11
CP000410.2	Genbank	gene	1101211	1102008	.	-	.	ID=gene-SPD_1075;Name=SPD_1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1075
CP000410.2	Genbank	CDS	1101211	1102008	.	-	0	ID=cds-ABJ54448.1;Parent=gene-SPD_1075;Dbxref=NCBI_GP:ABJ54448.1;Name=ABJ54448.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1215%3B equivalent gene in S.pneumoniae R6 %3D spr1097%3B identified by match to protein family HMM PF01226;gbkey=CDS;locus_tag=SPD_1075;product=transporter%2C FNT family protein%2C putative;protein_id=ABJ54448.1;transl_table=11
CP000410.2	Genbank	gene	1102252	1102995	.	-	.	ID=gene-SPD_1076;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=SPD_1076
CP000410.2	Genbank	CDS	1102252	1102995	.	-	0	ID=cds-ABJ53814.1;Parent=gene-SPD_1076;Dbxref=NCBI_GP:ABJ53814.1;Name=ABJ53814.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1218%3B equivalent gene in S.pneumoniae R6 %3D spr1098%3B identified by match to protein family HMM PF04203%3B match to protein family HMM TIGR01076;gbkey=CDS;gene=srtA;locus_tag=SPD_1076;product=sortase;protein_id=ABJ53814.1;transl_table=11
CP000410.2	Genbank	gene	1102995	1105463	.	-	.	ID=gene-SPD_1077;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=SPD_1077
CP000410.2	Genbank	CDS	1102995	1105463	.	-	0	ID=cds-ABJ54972.1;Parent=gene-SPD_1077;Dbxref=NCBI_GP:ABJ54972.1;Name=ABJ54972.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1219%3B equivalent gene in S.pneumoniae R6 %3D spr1099%3B identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063;gbkey=CDS;gene=gyrA;locus_tag=SPD_1077;product=DNA gyrase%2C A subunit;protein_id=ABJ54972.1;transl_table=11
CP000410.2	Genbank	gene	1105657	1106643	.	+	.	ID=gene-SPD_1078;Name=ldh;gbkey=Gene;gene=ldh;gene_biotype=protein_coding;locus_tag=SPD_1078
CP000410.2	Genbank	CDS	1105657	1106643	.	+	0	ID=cds-ABJ53898.1;Parent=gene-SPD_1078;Dbxref=NCBI_GP:ABJ53898.1;Name=ABJ53898.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1220%3B equivalent gene in S.pneumoniae R6 %3D spr1100%3B identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866%3B match to protein family HMM TIGR01771;gbkey=CDS;gene=ldh;locus_tag=SPD_1078;product=L-lactate dehydrogenase;protein_id=ABJ53898.1;transl_table=11
CP000410.2	Genbank	gene	1107029	1110283	.	-	.	ID=gene-SPD_1079;Name=SPD_1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1079
CP000410.2	Genbank	CDS	1107029	1110283	.	-	0	ID=cds-ABJ54671.1;Parent=gene-SPD_1079;Dbxref=NCBI_GP:ABJ54671.1;Name=ABJ54671.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1221%3B equivalent gene in S.pneumoniae R6 %3D spr1101%3B identified by match to protein family HMM PF04851;gbkey=CDS;locus_tag=SPD_1079;product=type II restriction endonuclease%2C putative;protein_id=ABJ54671.1;transl_table=11
CP000410.2	Genbank	gene	1110448	1112319	.	-	.	ID=gene-SPD_1080;Name=SPD_1080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1080
CP000410.2	Genbank	CDS	1110448	1112319	.	-	0	ID=cds-ABJ54075.1;Parent=gene-SPD_1080;Dbxref=NCBI_GP:ABJ54075.1;Name=ABJ54075.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1222%3B equivalent gene in S.pneumoniae R6 %3D spr1102%3B identified by match to protein family HMM PF07669;gbkey=CDS;locus_tag=SPD_1080;product=type II restriction endonuclease%2C putative;protein_id=ABJ54075.1;transl_table=11
CP000410.2	Genbank	gene	1112394	1112648	.	-	.	ID=gene-SPD_1081;Name=SPD_1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1081
CP000410.2	Genbank	CDS	1112394	1112648	.	-	0	ID=cds-ABJ54505.1;Parent=gene-SPD_1081;Dbxref=NCBI_GP:ABJ54505.1;Name=ABJ54505.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1223%3B equivalent gene in S.pneumoniae R6 %3D spr1103%3B identified by match to protein family HMM PF05016%3B match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=SPD_1081;product=hypothetical protein;protein_id=ABJ54505.1;transl_table=11
CP000410.2	Genbank	gene	1112650	1112952	.	-	.	ID=gene-SPD_1082;Name=SPD_1082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1082
CP000410.2	Genbank	CDS	1112650	1112952	.	-	0	ID=cds-ABJ55339.1;Parent=gene-SPD_1082;Dbxref=NCBI_GP:ABJ55339.1;Name=ABJ55339.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1224%3B equivalent gene in S.pneumoniae R6 %3D spr1104;gbkey=CDS;locus_tag=SPD_1082;product=hypothetical protein;protein_id=ABJ55339.1;transl_table=11
CP000410.2	Genbank	gene	1112983	1113792	.	-	.	ID=gene-SPD_1083;Name=vicX;gbkey=Gene;gene=vicX;gene_biotype=protein_coding;locus_tag=SPD_1083
CP000410.2	Genbank	CDS	1112983	1113792	.	-	0	ID=cds-ABJ55100.1;Parent=gene-SPD_1083;Dbxref=NCBI_GP:ABJ55100.1;Name=ABJ55100.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1225%3B equivalent gene in S.pneumoniae R6 %3D spr1105%3B identified by match to protein family HMM PF00753;gbkey=CDS;gene=vicX;locus_tag=SPD_1083;product=vicX protein;protein_id=ABJ55100.1;transl_table=11
CP000410.2	Genbank	gene	1113794	1115143	.	-	.	ID=gene-SPD_1084;Name=SPD_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1084
CP000410.2	Genbank	CDS	1113794	1115143	.	-	0	ID=cds-ABJ54218.1;Parent=gene-SPD_1084;Dbxref=NCBI_GP:ABJ54218.1;Name=ABJ54218.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1226%3B equivalent gene in S.pneumoniae R6 %3D spr1106%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF00989%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR00229;gbkey=CDS;locus_tag=SPD_1084;product=sensory box sensor histidine kinase;protein_id=ABJ54218.1;transl_table=11
CP000410.2	Genbank	gene	1115136	1115840	.	-	.	ID=gene-SPD_1085;Name=SPD_1085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1085
CP000410.2	Genbank	CDS	1115136	1115840	.	-	0	ID=cds-ABJ53946.1;Parent=gene-SPD_1085;Dbxref=NCBI_GP:ABJ53946.1;Name=ABJ53946.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1227%3B equivalent gene in S.pneumoniae R6 %3D spr1107%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=SPD_1085;product=DNA-binding response regulator;protein_id=ABJ53946.1;transl_table=11
CP000410.2	Genbank	gene	1115895	1117070	.	-	.	ID=gene-SPD_1086;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=SPD_1086
CP000410.2	Genbank	CDS	1115895	1117070	.	-	0	ID=cds-ABJ54966.1;Parent=gene-SPD_1086;Dbxref=NCBI_GP:ABJ54966.1;Name=ABJ54966.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1228%3B equivalent gene in S.pneumoniae R6 %3D spr1108%3B identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084;gbkey=CDS;gene=mutY;locus_tag=SPD_1086;product=A/G-specific adenine glycosylase;protein_id=ABJ54966.1;transl_table=11
CP000410.2	Genbank	gene	1117399	1119069	.	-	.	ID=gene-SPD_1087;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=SPD_1087
CP000410.2	Genbank	CDS	1117399	1119069	.	-	0	ID=cds-ABJ55341.1;Parent=gene-SPD_1087;Dbxref=NCBI_GP:ABJ55341.1;Name=ABJ55341.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1229%3B equivalent gene in S.pneumoniae R6 %3D spr1109%3B identified by match to protein family HMM PF01268;gbkey=CDS;gene=fhs;locus_tag=SPD_1087;product=formate--tetrahydrofolate ligase;protein_id=ABJ55341.1;transl_table=11
CP000410.2	Genbank	gene	1119299	1119988	.	+	.	ID=gene-SPD_1088;Name=coaB;gbkey=Gene;gene=coaB;gene_biotype=protein_coding;locus_tag=SPD_1088
CP000410.2	Genbank	CDS	1119299	1119988	.	+	0	ID=cds-ABJ54472.1;Parent=gene-SPD_1088;Dbxref=NCBI_GP:ABJ54472.1;Name=ABJ54472.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1230%3B equivalent gene in S.pneumoniae R6 %3D spr1110%3B identified by match to protein family HMM PF04127%3B match to protein family HMM TIGR02114;gbkey=CDS;gene=coaB;locus_tag=SPD_1088;product=phosphopantothenate--cysteine ligase;protein_id=ABJ54472.1;transl_table=11
CP000410.2	Genbank	gene	1120000	1120551	.	+	.	ID=gene-SPD_1089;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=protein_coding;locus_tag=SPD_1089
CP000410.2	Genbank	CDS	1120000	1120551	.	+	0	ID=cds-ABJ54617.1;Parent=gene-SPD_1089;Dbxref=NCBI_GP:ABJ54617.1;Name=ABJ54617.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1231%3B equivalent gene in S.pneumoniae R6 %3D spr1111%3B identified by match to protein family HMM PF02441%3B match to protein family HMM TIGR02113;gbkey=CDS;gene=coaC;locus_tag=SPD_1089;product=phosphopantothenoylcysteine decarboxylase;protein_id=ABJ54617.1;transl_table=11
CP000410.2	Genbank	gene	1120535	1121098	.	+	.	ID=gene-SPD_1090;Name=SPD_1090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1090
CP000410.2	Genbank	CDS	1120535	1121098	.	+	0	ID=cds-ABJ53805.1;Parent=gene-SPD_1090;Dbxref=NCBI_GP:ABJ53805.1;Name=ABJ53805.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1232%3B equivalent gene in S.pneumoniae R6 %3D spr1112;gbkey=CDS;locus_tag=SPD_1090;product=membrane protein%2C putative;protein_id=ABJ53805.1;transl_table=11
CP000410.2	Genbank	gene	1121380	1121907	.	+	.	ID=gene-SPD_1091;Name=SPD_1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1091
CP000410.2	Genbank	CDS	1121380	1121907	.	+	0	ID=cds-ABJ54074.1;Parent=gene-SPD_1091;Dbxref=NCBI_GP:ABJ54074.1;Name=ABJ54074.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1233%3B equivalent gene in S.pneumoniae R6 %3D spr1113;gbkey=CDS;locus_tag=SPD_1091;product=membrane protein%2C putative;protein_id=ABJ54074.1;transl_table=11
CP000410.2	Genbank	gene	1121919	1122434	.	+	.	ID=gene-SPD_1093;Name=SPD_1093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1093
CP000410.2	Genbank	CDS	1121919	1122434	.	+	0	ID=cds-ABJ54316.1;Parent=gene-SPD_1093;Dbxref=NCBI_GP:ABJ54316.1;Name=ABJ54316.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1114%3B identified by match to protein family HMM PF02829;gbkey=CDS;locus_tag=SPD_1093;product=transcriptional regulator%2C biotin repressor family protein;protein_id=ABJ54316.1;transl_table=11
CP000410.2	Genbank	gene	1122431	1122898	.	-	.	ID=gene-SPD_1092;Name=SPD_1092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1092
CP000410.2	Genbank	CDS	1122431	1122898	.	-	0	ID=cds-ABJ54723.1;Parent=gene-SPD_1092;Dbxref=NCBI_GP:ABJ54723.1;Name=ABJ54723.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1235%3B equivalent gene in S.pneumoniae R6 %3D spr1115%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_1092;product=MutT/nudix family protein;protein_id=ABJ54723.1;transl_table=11
CP000410.2	Genbank	gene	1122972	1123460	.	-	.	ID=gene-SPD_1094;Name=SPD_1094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1094
CP000410.2	Genbank	CDS	1122972	1123460	.	-	0	ID=cds-ABJ54855.1;Parent=gene-SPD_1094;Dbxref=NCBI_GP:ABJ54855.1;Name=ABJ54855.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1236%3B equivalent gene in S.pneumoniae R6 %3D spr1116%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1094;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54855.1;transl_table=11
CP000410.2	Genbank	gene	1123426	1123989	.	-	.	ID=gene-SPD_1095;Name=SPD_1095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1095
CP000410.2	Genbank	CDS	1123426	1123989	.	-	0	ID=cds-ABJ55432.1;Parent=gene-SPD_1095;Dbxref=NCBI_GP:ABJ55432.1;Name=ABJ55432.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1237%3B equivalent gene in S.pneumoniae R6 %3D spr1117;gbkey=CDS;locus_tag=SPD_1095;product=hypothetical protein;protein_id=ABJ55432.1;transl_table=11
CP000410.2	Genbank	gene	1123999	1125987	.	-	.	ID=gene-SPD_1096;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=SPD_1096
CP000410.2	Genbank	CDS	1123999	1125987	.	-	0	ID=cds-ABJ54782.1;Parent=gene-SPD_1096;Dbxref=NCBI_GP:ABJ54782.1;Name=ABJ54782.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1238%3B equivalent gene in S.pneumoniae R6 %3D spr1118%3B identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00631;gbkey=CDS;gene=uvrB;locus_tag=SPD_1096;product=excinuclease ABC%2C B subunit;protein_id=ABJ54782.1;transl_table=11
CP000410.2	Genbank	gene	1126064	1127017	.	-	.	ID=gene-SPD_1097;Name=SPD_1097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1097
CP000410.2	Genbank	CDS	1126064	1127017	.	-	0	ID=cds-ABJ54094.1;Parent=gene-SPD_1097;Dbxref=NCBI_GP:ABJ54094.1;Name=ABJ54094.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1240%3B equivalent gene in S.pneumoniae R6 %3D spr1119%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_1097;product=CAAX amino terminal protease family protein;protein_id=ABJ54094.1;transl_table=11
CP000410.2	Genbank	gene	1127190	1129355	.	+	.	ID=gene-SPD_1098;Name=SPD_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1098
CP000410.2	Genbank	CDS	1127190	1129355	.	+	0	ID=cds-ABJ55228.1;Parent=gene-SPD_1098;Dbxref=NCBI_GP:ABJ55228.1;Name=ABJ55228.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1241%3B equivalent gene in S.pneumoniae R6 %3D spr1120%3B identified by match to protein family HMM PF00497%3B match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_1098;product=amino acid ABC transporter%2C amino acid-binding protein/permease protein;protein_id=ABJ55228.1;transl_table=11
CP000410.2	Genbank	gene	1129355	1130095	.	+	.	ID=gene-SPD_1099;Name=SPD_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1099
CP000410.2	Genbank	CDS	1129355	1130095	.	+	0	ID=cds-ABJ54828.1;Parent=gene-SPD_1099;Dbxref=NCBI_GP:ABJ54828.1;Name=ABJ54828.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1242%3B equivalent gene in S.pneumoniae R6 %3D spr1121%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1099;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ54828.1;transl_table=11
CP000410.2	Genbank	gene	1130244	1131731	.	+	.	ID=gene-SPD_1100;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=SPD_1100
CP000410.2	Genbank	CDS	1130244	1131731	.	+	0	ID=cds-ABJ54073.1;Parent=gene-SPD_1100;Dbxref=NCBI_GP:ABJ54073.1;Name=ABJ54073.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1243%3B equivalent gene in S.pneumoniae R6 %3D spr1122%3B identified by match to protein family HMM PF00479%3B match to protein family HMM PF02781%3B match to protein family HMM TIGR00871;gbkey=CDS;gene=zwf;locus_tag=SPD_1100;product=glucose-6-phosphate 1-dehydrogenase;protein_id=ABJ54073.1;transl_table=11
CP000410.2	Genbank	gene	1131777	1133054	.	-	.	ID=gene-SPD_1101;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=SPD_1101
CP000410.2	Genbank	CDS	1131777	1133054	.	-	0	ID=cds-ABJ54694.1;Parent=gene-SPD_1101;Dbxref=NCBI_GP:ABJ54694.1;Name=ABJ54694.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1244%3B equivalent gene in S.pneumoniae R6 %3D spr1123%3B identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064;gbkey=CDS;gene=ftsY;locus_tag=SPD_1101;product=signal recognition particle-docking protein FtsY;protein_id=ABJ54694.1;transl_table=11
CP000410.2	Genbank	gene	1133058	1133876	.	-	.	ID=gene-SPD_1102;Name=SPD_1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1102
CP000410.2	Genbank	CDS	1133058	1133876	.	-	0	ID=cds-ABJ53734.1;Parent=gene-SPD_1102;Dbxref=NCBI_GP:ABJ53734.1;Name=ABJ53734.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1245%3B equivalent gene in S.pneumoniae R6 %3D spr1124%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_1102;product=Cof family protein;protein_id=ABJ53734.1;transl_table=11
CP000410.2	Genbank	gene	1133876	1134670	.	-	.	ID=gene-SPD_1103;Name=SPD_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1103
CP000410.2	Genbank	CDS	1133876	1134670	.	-	0	ID=cds-ABJ55271.1;Parent=gene-SPD_1103;Dbxref=NCBI_GP:ABJ55271.1;Name=ABJ55271.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1246%3B equivalent gene in S.pneumoniae R6 %3D spr1125%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_1103;product=Cof family protein;protein_id=ABJ55271.1;transl_table=11
CP000410.2	Genbank	gene	1134667	1138206	.	-	.	ID=gene-SPD_1104;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=SPD_1104
CP000410.2	Genbank	CDS	1134667	1138206	.	-	0	ID=cds-ABJ54202.1;Parent=gene-SPD_1104;Dbxref=NCBI_GP:ABJ54202.1;Name=ABJ54202.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1247%3B equivalent gene in S.pneumoniae R6 %3D spr1126%3B identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470%3B match to protein family HMM TIGR00650%3B match to protein family HMM TIGR02168;gbkey=CDS;gene=smc;locus_tag=SPD_1104;product=chromosome segregation protein SMC;protein_id=ABJ54202.1;transl_table=11
CP000410.2	Genbank	gene	1138197	1138895	.	-	.	ID=gene-SPD_1105;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SPD_1105
CP000410.2	Genbank	CDS	1138197	1138895	.	-	0	ID=cds-ABJ55368.1;Parent=gene-SPD_1105;Dbxref=NCBI_GP:ABJ55368.1;Name=ABJ55368.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1248%3B equivalent gene in S.pneumoniae R6 %3D spr1127%3B identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191;gbkey=CDS;gene=rnc;locus_tag=SPD_1105;product=ribonuclease III;protein_id=ABJ55368.1;transl_table=11
CP000410.2	Genbank	gene	1139078	1139149	.	-	.	ID=gene-SPD_1106;Name=SPD_1106;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1106
CP000410.2	Genbank	tRNA	1139078	1139149	.	-	.	ID=rna-SPD_1106;Parent=gene-SPD_1106;gbkey=tRNA;locus_tag=SPD_1106;product=tRNA-Arg
CP000410.2	Genbank	exon	1139078	1139149	.	-	.	ID=exon-SPD_1106-1;Parent=rna-SPD_1106;gbkey=tRNA;locus_tag=SPD_1106;product=tRNA-Arg
CP000410.2	Genbank	gene	1139213	1140199	.	-	.	ID=gene-SPD_1107;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=SPD_1107
CP000410.2	Genbank	CDS	1139213	1140199	.	-	0	ID=cds-ABJ54561.1;Parent=gene-SPD_1107;Dbxref=NCBI_GP:ABJ54561.1;Name=ABJ54561.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1249%3B equivalent gene in S.pneumoniae R6 %3D spr1128%3B identified by match to protein family HMM PF00478%3B match to protein family HMM TIGR01306;gbkey=CDS;gene=guaC;locus_tag=SPD_1107;product=guanosine monophosphate reductase;protein_id=ABJ54561.1;transl_table=11
CP000410.2	Genbank	gene	1140374	1141690	.	-	.	ID=gene-SPD_1108;Name=SPD_1108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1108
CP000410.2	Genbank	CDS	1140374	1141690	.	-	0	ID=cds-ABJ54873.1;Parent=gene-SPD_1108;Dbxref=NCBI_GP:ABJ54873.1;Name=ABJ54873.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1250%3B equivalent gene in S.pneumoniae R6 %3D spr1129;gbkey=CDS;locus_tag=SPD_1108;product=hypothetical protein;protein_id=ABJ54873.1;transl_table=11
CP000410.2	Genbank	gene	1141677	1143608	.	-	.	ID=gene-SPD_1109;Name=SPD_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1109
CP000410.2	Genbank	CDS	1141677	1143608	.	-	0	ID=cds-ABJ53890.1;Parent=gene-SPD_1109;Dbxref=NCBI_GP:ABJ53890.1;Name=ABJ53890.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1251%3B equivalent gene in S.pneumoniae R6 %3D spr1130;gbkey=CDS;locus_tag=SPD_1109;product=endonuclease%2C putative;protein_id=ABJ53890.1;transl_table=11
CP000410.2	Genbank	gene	1143772	1143933	.	-	.	ID=gene-SPD_1110;Name=SPD_1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1110
CP000410.2	Genbank	CDS	1143772	1143933	.	-	0	ID=cds-ABJ54990.1;Parent=gene-SPD_1110;Dbxref=NCBI_GP:ABJ54990.1;Name=ABJ54990.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1252%3B equivalent gene in S.pneumoniae R6 %3D spr1131;gbkey=CDS;locus_tag=SPD_1110;product=hypothetical protein;protein_id=ABJ54990.1;transl_table=11
CP000410.2	Genbank	gene	1143923	1144096	.	-	.	ID=gene-SPD_1111;Name=SPD_1111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1111
CP000410.2	Genbank	CDS	1143923	1144096	.	-	0	ID=cds-ABJ54292.1;Parent=gene-SPD_1111;Dbxref=NCBI_GP:ABJ54292.1;Name=ABJ54292.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1253%3B equivalent gene in S.pneumoniae R6 %3D spr1132;gbkey=CDS;locus_tag=SPD_1111;product=hypothetical protein;protein_id=ABJ54292.1;transl_table=11
CP000410.2	Genbank	gene	1144196	1144339	.	-	.	ID=gene-SPD_1112;Name=SPD_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1112
CP000410.2	Genbank	CDS	1144196	1144339	.	-	0	ID=cds-ABJ54793.1;Parent=gene-SPD_1112;Dbxref=NCBI_GP:ABJ54793.1;Name=ABJ54793.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1254;gbkey=CDS;locus_tag=SPD_1112;product=hypothetical protein;protein_id=ABJ54793.1;transl_table=11
CP000410.2	Genbank	gene	1144558	1144917	.	-	.	ID=gene-SPD_1113;Name=SPD_1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1113
CP000410.2	Genbank	CDS	1144558	1144917	.	-	0	ID=cds-ABJ53879.1;Parent=gene-SPD_1113;Dbxref=NCBI_GP:ABJ53879.1;Name=ABJ53879.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1255%3B equivalent gene in S.pneumoniae R6 %3D spr1133;gbkey=CDS;locus_tag=SPD_1113;product=3-isopropylmalate dehydratase small subunit%2C putative;protein_id=ABJ53879.1;transl_table=11
CP000410.2	Genbank	gene	1145015	1145128	.	+	.	ID=gene-SPD_1114;Name=SPD_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1114
CP000410.2	Genbank	CDS	1145015	1145128	.	+	0	ID=cds-ABJ54235.1;Parent=gene-SPD_1114;Dbxref=NCBI_GP:ABJ54235.1;Name=ABJ54235.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1114;product=hypothetical protein;protein_id=ABJ54235.1;transl_table=11
CP000410.2	Genbank	gene	1145187	1146224	.	-	.	ID=gene-SPD_1115;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=SPD_1115
CP000410.2	Genbank	CDS	1145187	1146224	.	-	0	ID=cds-ABJ55147.1;Parent=gene-SPD_1115;Dbxref=NCBI_GP:ABJ55147.1;Name=ABJ55147.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1135%3B identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169;gbkey=CDS;gene=leuB;locus_tag=SPD_1115;product=3-isopropylmalate dehydrogenase;protein_id=ABJ55147.1;transl_table=11
CP000410.2	Genbank	pseudogene	1146236	1147330	.	-	.	ID=gene-SPD_1116;Name=leuA;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1258%3B equivalent gene in S.pneumoniae R6 %3D spr1136 %26 spr1137. The R6 gene has on ortholog in the same position%3B 2-isopropylmalate synthase%2C authentic truncation;gbkey=Gene;gene=leuA;gene_biotype=pseudogene;locus_tag=SPD_1116;pseudo=true
CP000410.2	Genbank	gene	1147349	1148005	.	-	.	ID=gene-SPD_1117;Name=SPD_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1117
CP000410.2	Genbank	CDS	1147349	1148005	.	-	0	ID=cds-ABJ54280.1;Parent=gene-SPD_1117;Dbxref=NCBI_GP:ABJ54280.1;Name=ABJ54280.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1259%3B equivalent gene in S.pneumoniae R6 %3D spr1138%3B identified by match to protein family HMM PF04237;gbkey=CDS;locus_tag=SPD_1117;product=hypothetical protein;protein_id=ABJ54280.1;transl_table=11
CP000410.2	Genbank	gene	1148049	1148681	.	-	.	ID=gene-SPD_1118;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=SPD_1118
CP000410.2	Genbank	CDS	1148049	1148681	.	-	0	ID=cds-ABJ55157.1;Parent=gene-SPD_1118;Dbxref=NCBI_GP:ABJ55157.1;Name=ABJ55157.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1260%3B equivalent gene in S.pneumoniae R6 %3D spr1139%3B identified by match to protein family HMM PF03932;gbkey=CDS;gene=cutC;locus_tag=SPD_1118;product=copper homeostasis protein CutC;protein_id=ABJ55157.1;transl_table=11
CP000410.2	Genbank	gene	1148774	1149133	.	-	.	ID=gene-SPD_1119;Name=SPD_1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1119
CP000410.2	Genbank	CDS	1148774	1149133	.	-	0	ID=cds-ABJ53969.1;Parent=gene-SPD_1119;Dbxref=NCBI_GP:ABJ53969.1;Name=ABJ53969.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1261%3B equivalent gene in S.pneumoniae R6 %3D spr1140%3B identified by match to protein family HMM PF04304;gbkey=CDS;locus_tag=SPD_1119;product=hypothetical protein;protein_id=ABJ53969.1;transl_table=11
CP000410.2	Genbank	gene	1149239	1151326	.	-	.	ID=gene-SPD_1120;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=SPD_1120
CP000410.2	Genbank	CDS	1149239	1151326	.	-	0	ID=cds-ABJ54911.1;Parent=gene-SPD_1120;Dbxref=NCBI_GP:ABJ54911.1;Name=ABJ54911.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1263%3B equivalent gene in S.pneumoniae R6 %3D spr1141%3B identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051;gbkey=CDS;gene=topA;locus_tag=SPD_1120;product=DNA topoisomerase I;protein_id=ABJ54911.1;transl_table=11
CP000410.2	Genbank	gene	1151493	1152536	.	-	.	ID=gene-SPD_1121;Name=SPD_1121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1121
CP000410.2	Genbank	CDS	1151493	1152536	.	-	0	ID=cds-ABJ53852.1;Parent=gene-SPD_1121;Dbxref=NCBI_GP:ABJ53852.1;Name=ABJ53852.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1264%3B equivalent gene in S.pneumoniae R6 %3D spr1142%3B identified by match to protein family HMM PF04087;gbkey=CDS;locus_tag=SPD_1121;product=membrane protein%2C putative;protein_id=ABJ53852.1;transl_table=11
CP000410.2	Genbank	gene	1153426	1154274	.	-	.	ID=gene-SPD_1122;Name=SPD_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1122
CP000410.2	Genbank	CDS	1153426	1154274	.	-	0	ID=cds-ABJ54696.1;Parent=gene-SPD_1122;Dbxref=NCBI_GP:ABJ54696.1;Name=ABJ54696.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1266%3B equivalent gene in S.pneumoniae R6 %3D spr1144%3B identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732;gbkey=CDS;locus_tag=SPD_1122;product=DNA processing protein DprA%2C putative;protein_id=ABJ54696.1;transl_table=11
CP000410.2	Genbank	gene	1154370	1155059	.	-	.	ID=gene-SPD_1123;Name=licC;gbkey=Gene;gene=licC;gene_biotype=protein_coding;locus_tag=SPD_1123
CP000410.2	Genbank	CDS	1154370	1155059	.	-	0	ID=cds-ABJ53980.1;Parent=gene-SPD_1123;Dbxref=NCBI_GP:ABJ53980.1;Name=ABJ53980.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1267%3B equivalent gene in S.pneumoniae R6 %3D spr1145%3B identified by match to protein family HMM PF00483;gbkey=CDS;gene=licC;locus_tag=SPD_1123;product=CTP:phosphocholine cytidylyltransferase;protein_id=ABJ53980.1;transl_table=11
CP000410.2	Genbank	gene	1155071	1155949	.	-	.	ID=gene-SPD_1124;Name=licB;gbkey=Gene;gene=licB;gene_biotype=protein_coding;locus_tag=SPD_1124
CP000410.2	Genbank	CDS	1155071	1155949	.	-	0	ID=cds-ABJ54838.1;Parent=gene-SPD_1124;Dbxref=NCBI_GP:ABJ54838.1;Name=ABJ54838.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1268%3B equivalent gene in S.pneumoniae R6 %3D spr1146%3B identified by match to protein family HMM PF00892;gbkey=CDS;gene=licB;locus_tag=SPD_1124;product=protein LicB;protein_id=ABJ54838.1;transl_table=11
CP000410.2	Genbank	gene	1155939	1156808	.	-	.	ID=gene-SPD_1125;Name=pck;gbkey=Gene;gene=pck;gene_biotype=protein_coding;locus_tag=SPD_1125
CP000410.2	Genbank	CDS	1155939	1156808	.	-	0	ID=cds-ABJ53842.1;Parent=gene-SPD_1125;Dbxref=NCBI_GP:ABJ53842.1;Name=ABJ53842.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1269%3B equivalent gene in S.pneumoniae R6 %3D spr1147%3B identified by match to protein family HMM PF01633%3B match to protein family HMM PF01636;gbkey=CDS;gene=pck;locus_tag=SPD_1125;product=choline kinase;protein_id=ABJ53842.1;transl_table=11
CP000410.2	Genbank	gene	1156825	1157847	.	-	.	ID=gene-SPD_1126;Name=SPD_1126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1126
CP000410.2	Genbank	CDS	1156825	1157847	.	-	0	ID=cds-ABJ54611.1;Parent=gene-SPD_1126;Dbxref=NCBI_GP:ABJ54611.1;Name=ABJ54611.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1270%3B equivalent gene in S.pneumoniae R6 %3D spr1148;gbkey=CDS;locus_tag=SPD_1126;product=alcohol dehydrogenase%2C zinc-containing;protein_id=ABJ54611.1;transl_table=11
CP000410.2	Genbank	gene	1157852	1158559	.	-	.	ID=gene-SPD_1127;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=SPD_1127
CP000410.2	Genbank	CDS	1157852	1158559	.	-	0	ID=cds-ABJ55399.1;Parent=gene-SPD_1127;Dbxref=NCBI_GP:ABJ55399.1;Name=ABJ55399.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1271%3B equivalent gene in S.pneumoniae R6 %3D spr1149%3B identified by match to protein family HMM PF01128;gbkey=CDS;gene=ispD;locus_tag=SPD_1127;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=ABJ55399.1;transl_table=11
CP000410.2	Genbank	gene	1158895	1160382	.	+	.	ID=gene-SPD_1128;Name=SPD_1128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1128
CP000410.2	Genbank	CDS	1158895	1160382	.	+	0	ID=cds-ABJ54537.1;Parent=gene-SPD_1128;Dbxref=NCBI_GP:ABJ54537.1;Name=ABJ54537.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1272%3B equivalent gene in S.pneumoniae R6 %3D spr1150%3B identified by match to protein family HMM PF01943;gbkey=CDS;locus_tag=SPD_1128;product=polysaccharide biosynthesis protein%2C putative;protein_id=ABJ54537.1;transl_table=11
CP000410.2	Genbank	gene	1160392	1161195	.	+	.	ID=gene-SPD_1129;Name=licD1;gbkey=Gene;gene=licD1;gene_biotype=protein_coding;locus_tag=SPD_1129
CP000410.2	Genbank	CDS	1160392	1161195	.	+	0	ID=cds-ABJ55154.1;Parent=gene-SPD_1129;Dbxref=NCBI_GP:ABJ55154.1;Name=ABJ55154.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1273%3B equivalent gene in S.pneumoniae R6 %3D spr1151%3B identified by match to protein family HMM PF04991;gbkey=CDS;gene=licD1;locus_tag=SPD_1129;product=phosphotransferase LicD1;protein_id=ABJ55154.1;transl_table=11
CP000410.2	Genbank	gene	1161197	1162006	.	+	.	ID=gene-SPD_1130;Name=licD2;gbkey=Gene;gene=licD2;gene_biotype=protein_coding;locus_tag=SPD_1130
CP000410.2	Genbank	CDS	1161197	1162006	.	+	0	ID=cds-ABJ54271.1;Parent=gene-SPD_1130;Dbxref=NCBI_GP:ABJ54271.1;Name=ABJ54271.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1274%3B equivalent gene in S.pneumoniae R6 %3D spr1152%3B identified by match to protein family HMM PF04991;gbkey=CDS;gene=licD2;locus_tag=SPD_1130;product=phosphotransferase LicD2;protein_id=ABJ54271.1;transl_table=11
CP000410.2	Genbank	gene	1162281	1165457	.	-	.	ID=gene-SPD_1131;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SPD_1131
CP000410.2	Genbank	CDS	1162281	1165457	.	-	0	ID=cds-ABJ54797.1;Parent=gene-SPD_1131;Dbxref=NCBI_GP:ABJ54797.1;Name=ABJ54797.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1275%3B equivalent gene in S.pneumoniae R6 %3D spr1153%3B identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM TIGR01369;gbkey=CDS;gene=carB;locus_tag=SPD_1131;product=carbamoyl-phosphate synthase%2C large subunit;protein_id=ABJ54797.1;transl_table=11
CP000410.2	Genbank	gene	1165770	1166849	.	-	.	ID=gene-SPD_1132;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=SPD_1132
CP000410.2	Genbank	CDS	1165770	1166849	.	-	0	ID=cds-ABJ53670.1;Parent=gene-SPD_1132;Dbxref=NCBI_GP:ABJ53670.1;Name=ABJ53670.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1276%3B equivalent gene in S.pneumoniae R6 %3D spr1154%3B identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368;gbkey=CDS;gene=carA;locus_tag=SPD_1132;product=carbamoyl-phosphate synthase%2C small subunit;protein_id=ABJ53670.1;transl_table=11
CP000410.2	Genbank	gene	1166899	1167822	.	-	.	ID=gene-SPD_1133;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=SPD_1133
CP000410.2	Genbank	CDS	1166899	1167822	.	-	0	ID=cds-ABJ55115.1;Parent=gene-SPD_1133;Dbxref=NCBI_GP:ABJ55115.1;Name=ABJ55115.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1277%3B equivalent gene in S.pneumoniae R6 %3D spr1155%3B identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670;gbkey=CDS;gene=pyrB;locus_tag=SPD_1133;product=aspartate carbamoyltransferase;protein_id=ABJ55115.1;transl_table=11
CP000410.2	Genbank	gene	1167841	1168362	.	-	.	ID=gene-SPD_1134;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=SPD_1134
CP000410.2	Genbank	CDS	1167841	1168362	.	-	0	ID=cds-ABJ54004.1;Parent=gene-SPD_1134;Dbxref=NCBI_GP:ABJ54004.1;Name=ABJ54004.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1278%3B equivalent gene in S.pneumoniae R6 %3D spr1156%3B identified by match to protein family HMM PF00156;gbkey=CDS;gene=pyrR;locus_tag=SPD_1134;product=pyrimidine operon regulatory protein/uracil phosphoribosyltransferase;protein_id=ABJ54004.1;transl_table=11
CP000410.2	Genbank	gene	1168573	1169202	.	-	.	ID=gene-SPD_1135;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=SPD_1135
CP000410.2	Genbank	CDS	1168573	1169202	.	-	0	ID=cds-ABJ54331.1;Parent=gene-SPD_1135;Dbxref=NCBI_GP:ABJ54331.1;Name=ABJ54331.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1279%3B equivalent gene in S.pneumoniae R6 %3D spr1157%3B identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083;gbkey=CDS;gene=nth;locus_tag=SPD_1135;product=endonuclease III;protein_id=ABJ54331.1;transl_table=11
CP000410.2	Genbank	gene	1169202	1169744	.	-	.	ID=gene-SPD_1136;Name=SPD_1136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1136
CP000410.2	Genbank	CDS	1169202	1169744	.	-	0	ID=cds-ABJ55057.1;Parent=gene-SPD_1136;Dbxref=NCBI_GP:ABJ55057.1;Name=ABJ55057.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1280%3B equivalent gene in S.pneumoniae R6 %3D spr1158%3B identified by match to protein family HMM PF02620%3B COG1399;gbkey=CDS;locus_tag=SPD_1136;product=putative ACR;protein_id=ABJ55057.1;transl_table=11
CP000410.2	Genbank	gene	1170470	1172029	.	+	.	ID=gene-SPD_1137;Name=SPD_1137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1137
CP000410.2	Genbank	CDS	1170470	1172029	.	+	0	ID=cds-ABJ55487.1;Parent=gene-SPD_1137;Dbxref=NCBI_GP:ABJ55487.1;Name=ABJ55487.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1282%3B equivalent gene in S.pneumoniae R6 %3D spr1161%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1137;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ55487.1;transl_table=11
CP000410.2	Genbank	gene	1172178	1173077	.	-	.	ID=gene-SPD_1138;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=SPD_1138
CP000410.2	Genbank	CDS	1172178	1173077	.	-	0	ID=cds-ABJ54353.1;Parent=gene-SPD_1138;Dbxref=NCBI_GP:ABJ54353.1;Name=ABJ54353.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1283%3B equivalent gene in S.pneumoniae R6 %3D spr1162%3B identified by match to protein family HMM PF01435;gbkey=CDS;gene=htpX;locus_tag=SPD_1138;product=heat shock protein HtpX;protein_id=ABJ54353.1;transl_table=11
CP000410.2	Genbank	gene	1173079	1173639	.	-	.	ID=gene-SPD_1139;Name=lemA;gbkey=Gene;gene=lemA;gene_biotype=protein_coding;locus_tag=SPD_1139
CP000410.2	Genbank	CDS	1173079	1173639	.	-	0	ID=cds-ABJ54299.1;Parent=gene-SPD_1139;Dbxref=NCBI_GP:ABJ54299.1;Name=ABJ54299.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1284%3B equivalent gene in S.pneumoniae R6 %3D spr1163%3B identified by match to protein family HMM PF04011;gbkey=CDS;gene=lemA;locus_tag=SPD_1139;product=LemA protein;protein_id=ABJ54299.1;transl_table=11
CP000410.2	Genbank	gene	1173733	1174446	.	+	.	ID=gene-SPD_1140;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=SPD_1140
CP000410.2	Genbank	CDS	1173733	1174446	.	+	0	ID=cds-ABJ55129.1;Parent=gene-SPD_1140;Dbxref=NCBI_GP:ABJ55129.1;Name=ABJ55129.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1285%3B equivalent gene in S.pneumoniae R6 %3D spr1164%3B identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138;gbkey=CDS;gene=gidB;locus_tag=SPD_1140;product=methyltransferase GidB;protein_id=ABJ55129.1;transl_table=11
CP000410.2	Genbank	gene	1174798	1176081	.	+	.	ID=gene-SPD_1141;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=SPD_1141
CP000410.2	Genbank	CDS	1174798	1176081	.	+	0	ID=cds-ABJ54330.1;Parent=gene-SPD_1141;Dbxref=NCBI_GP:ABJ54330.1;Name=ABJ54330.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1286%3B equivalent gene in S.pneumoniae R6 %3D spr1165%3B identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;gene=uraA;locus_tag=SPD_1141;product=uracil-xanthine permease;protein_id=ABJ54330.1;transl_table=11
CP000410.2	Genbank	gene	1176276	1177847	.	-	.	ID=gene-SPD_1142;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=SPD_1142
CP000410.2	Genbank	CDS	1176276	1177847	.	-	0	ID=cds-ABJ53947.1;Parent=gene-SPD_1142;Dbxref=NCBI_GP:ABJ53947.1;Name=ABJ53947.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1287%3B equivalent gene in S.pneumoniae R6 %3D spr1166%3B identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959;gbkey=CDS;gene=ffh;locus_tag=SPD_1142;product=signal recognition particle protein;protein_id=ABJ53947.1;transl_table=11
CP000410.2	Genbank	gene	1177859	1178191	.	-	.	ID=gene-SPD_1143;Name=SPD_1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1143
CP000410.2	Genbank	CDS	1177859	1178191	.	-	0	ID=cds-ABJ53847.1;Parent=gene-SPD_1143;Dbxref=NCBI_GP:ABJ53847.1;Name=ABJ53847.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1288%3B equivalent gene in S.pneumoniae R6 %3D spr1167%3B identified by match to protein family HMM PF04297%3B match to protein family HMM PF04967;gbkey=CDS;locus_tag=SPD_1143;product=hypothetical protein;protein_id=ABJ53847.1;transl_table=11
CP000410.2	Genbank	gene	1178282	1178659	.	-	.	ID=gene-SPD_1144;Name=SPD_1144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1144
CP000410.2	Genbank	CDS	1178282	1178659	.	-	0	ID=cds-ABJ54655.1;Parent=gene-SPD_1144;Dbxref=NCBI_GP:ABJ54655.1;Name=ABJ54655.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1289%3B equivalent gene in S.pneumoniae R6 %3D spr1168;gbkey=CDS;locus_tag=SPD_1144;product=hypothetical protein;protein_id=ABJ54655.1;transl_table=11
CP000410.2	Genbank	gene	1178731	1180035	.	+	.	ID=gene-SPD_1145;Name=SPD_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1145
CP000410.2	Genbank	CDS	1178731	1180035	.	+	0	ID=cds-ABJ54391.1;Parent=gene-SPD_1145;Dbxref=NCBI_GP:ABJ54391.1;Name=ABJ54391.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1290%3B equivalent gene in S.pneumoniae R6 %3D spr1169%3B identified by match to protein family HMM PF01966;gbkey=CDS;locus_tag=SPD_1145;product=hypothetical protein;protein_id=ABJ54391.1;transl_table=11
CP000410.2	Genbank	gene	1180048	1180854	.	+	.	ID=gene-SPD_1146;Name=SPD_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1146
CP000410.2	Genbank	CDS	1180048	1180854	.	+	0	ID=cds-ABJ55218.1;Parent=gene-SPD_1146;Dbxref=NCBI_GP:ABJ55218.1;Name=ABJ55218.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1291%3B equivalent gene in S.pneumoniae R6 %3D spr1170%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_1146;product=Cof family protein;protein_id=ABJ55218.1;transl_table=11
CP000410.2	Genbank	gene	1180909	1180980	.	-	.	ID=gene-SPD_1147;Name=SPD_1147;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1147
CP000410.2	Genbank	tRNA	1180909	1180980	.	-	.	ID=rna-SPD_1147;Parent=gene-SPD_1147;gbkey=tRNA;locus_tag=SPD_1147;product=tRNA-Arg
CP000410.2	Genbank	exon	1180909	1180980	.	-	.	ID=exon-SPD_1147-1;Parent=rna-SPD_1147;gbkey=tRNA;locus_tag=SPD_1147;product=tRNA-Arg
CP000410.2	Genbank	gene	1181022	1181369	.	-	.	ID=gene-SPD_1148;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SPD_1148
CP000410.2	Genbank	CDS	1181022	1181369	.	-	0	ID=cds-ABJ54481.1;Parent=gene-SPD_1148;Dbxref=NCBI_GP:ABJ54481.1;Name=ABJ54481.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1293%3B equivalent gene in S.pneumoniae R6 %3D spr1171%3B identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024;gbkey=CDS;gene=rplS;locus_tag=SPD_1148;product=ribosomal protein L19;protein_id=ABJ54481.1;transl_table=11
CP000410.2	Genbank	gene	1181488	1181817	.	-	.	ID=gene-SPD_1149;Name=crcB1;gbkey=Gene;gene=crcB1;gene_biotype=protein_coding;locus_tag=SPD_1149
CP000410.2	Genbank	CDS	1181488	1181817	.	-	0	ID=cds-ABJ54222.1;Parent=gene-SPD_1149;Dbxref=NCBI_GP:ABJ54222.1;Name=ABJ54222.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1294%3B equivalent gene in S.pneumoniae R6 %3D spr1172%3B identified by match to protein family HMM PF02537;gbkey=CDS;gene=crcB1;locus_tag=SPD_1149;product=CrcB protein;protein_id=ABJ54222.1;transl_table=11
CP000410.2	Genbank	gene	1181811	1182185	.	-	.	ID=gene-SPD_1150;Name=crcB2;gbkey=Gene;gene=crcB2;gene_biotype=protein_coding;locus_tag=SPD_1150
CP000410.2	Genbank	CDS	1181811	1182185	.	-	0	ID=cds-ABJ55091.1;Parent=gene-SPD_1150;Dbxref=NCBI_GP:ABJ55091.1;Name=ABJ55091.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1295%3B equivalent gene in S.pneumoniae R6 %3D spr1173%3B identified by match to protein family HMM PF02537;gbkey=CDS;gene=crcB2;locus_tag=SPD_1150;product=CrcB protein;protein_id=ABJ55091.1;transl_table=11
CP000410.2	Genbank	gene	1182182	1182448	.	-	.	ID=gene-SPD_1151;Name=SPD_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1151
CP000410.2	Genbank	CDS	1182182	1182448	.	-	0	ID=cds-ABJ54945.1;Parent=gene-SPD_1151;Dbxref=NCBI_GP:ABJ54945.1;Name=ABJ54945.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1296%3B equivalent gene in S.pneumoniae R6 %3D spr1174%3B identified by match to protein family HMM PF01817%3B match to protein family HMM TIGR01805;gbkey=CDS;locus_tag=SPD_1151;product=chorismate mutase;protein_id=ABJ54945.1;transl_table=11
CP000410.2	Genbank	gene	1182564	1183007	.	-	.	ID=gene-SPD_1152;Name=fld;gbkey=Gene;gene=fld;gene_biotype=protein_coding;locus_tag=SPD_1152
CP000410.2	Genbank	CDS	1182564	1183007	.	-	0	ID=cds-ABJ55295.1;Parent=gene-SPD_1152;Dbxref=NCBI_GP:ABJ55295.1;Name=ABJ55295.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1297%3B equivalent gene in S.pneumoniae R6 %3D spr1175%3B identified by match to protein family HMM PF00258%3B match to protein family HMM PF07972%3B match to protein family HMM TIGR01753;gbkey=CDS;gene=fld;locus_tag=SPD_1152;product=flavodoxin;protein_id=ABJ55295.1;transl_table=11
CP000410.2	Genbank	gene	1183111	1184046	.	+	.	ID=gene-SPD_1153;Name=SPD_1153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1153
CP000410.2	Genbank	CDS	1183111	1184046	.	+	0	ID=cds-ABJ54706.1;Parent=gene-SPD_1153;Dbxref=NCBI_GP:ABJ54706.1;Name=ABJ54706.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1298%3B equivalent gene in S.pneumoniae R6 %3D spr1176%3B identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=SPD_1153;product=DHH subfamily 1 protein;protein_id=ABJ54706.1;transl_table=11
CP000410.2	Genbank	gene	1184142	1184384	.	+	.	ID=gene-SPD_1154;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=SPD_1154
CP000410.2	Genbank	CDS	1184142	1184384	.	+	0	ID=cds-ABJ54060.1;Parent=gene-SPD_1154;Dbxref=NCBI_GP:ABJ54060.1;Name=ABJ54060.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1299%3B equivalent gene in S.pneumoniae R6 %3D spr1177%3B identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105;gbkey=CDS;gene=rpmE;locus_tag=SPD_1154;product=ribosomal protein L31;protein_id=ABJ54060.1;transl_table=11
CP000410.2	Genbank	gene	1184441	1185019	.	-	.	ID=gene-SPD_1155;Name=SPD_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1155
CP000410.2	Genbank	CDS	1184441	1185019	.	-	0	ID=cds-ABJ54968.1;Parent=gene-SPD_1155;Dbxref=NCBI_GP:ABJ54968.1;Name=ABJ54968.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1300%3B equivalent gene in S.pneumoniae R6 %3D spr1178;gbkey=CDS;locus_tag=SPD_1155;product=hypothetical protein;protein_id=ABJ54968.1;transl_table=11
CP000410.2	Genbank	gene	1184994	1185998	.	-	.	ID=gene-SPD_1156;Name=SPD_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1156
CP000410.2	Genbank	CDS	1184994	1185998	.	-	0	ID=cds-ABJ54322.1;Parent=gene-SPD_1156;Dbxref=NCBI_GP:ABJ54322.1;Name=ABJ54322.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1179%3B identified by match to protein family HMM PF04261%3B match to protein family HMM TIGR01413;gbkey=CDS;locus_tag=SPD_1156;product=Dyp-type peroxidase family protein;protein_id=ABJ54322.1;transl_table=11
CP000410.2	Genbank	gene	1186050	1186316	.	-	.	ID=gene-SPD_1157;Name=SPD_1157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1157
CP000410.2	Genbank	CDS	1186050	1186316	.	-	0	ID=cds-ABJ55143.1;Parent=gene-SPD_1157;Dbxref=NCBI_GP:ABJ55143.1;Name=ABJ55143.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0733%3B equivalent gene in S.pneumoniae R6 %3D spr1180;gbkey=CDS;locus_tag=SPD_1157;product=hypothetical protein;protein_id=ABJ55143.1;transl_table=11
CP000410.2	Genbank	gene	1187004	1188350	.	+	.	ID=gene-SPD_1158;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=SPD_1158
CP000410.2	Genbank	CDS	1187004	1188350	.	+	0	ID=cds-ABJ55261.1;Parent=gene-SPD_1158;Dbxref=NCBI_GP:ABJ55261.1;Name=ABJ55261.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1306%3B equivalent gene in S.pneumoniae R6 %3D spr1181%3B identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812;gbkey=CDS;gene=gdhA;locus_tag=SPD_1158;product=NADP-specific glutamate dehydrogenase;protein_id=ABJ55261.1;transl_table=11
CP000410.2	Genbank	gene	1188846	1189016	.	-	.	ID=gene-SPD_1159;Name=SPD_1159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1159
CP000410.2	Genbank	CDS	1188846	1189016	.	-	0	ID=cds-ABJ54193.1;Parent=gene-SPD_1159;Dbxref=NCBI_GP:ABJ54193.1;Name=ABJ54193.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1307%3B equivalent gene in S.pneumoniae R6 %3D spr1182;gbkey=CDS;locus_tag=SPD_1159;product=hypothetical protein;protein_id=ABJ54193.1;transl_table=11
CP000410.2	Genbank	gene	1189029	1189670	.	-	.	ID=gene-SPD_1160;Name=SPD_1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1160
CP000410.2	Genbank	CDS	1189029	1189670	.	-	0	ID=cds-ABJ54792.1;Parent=gene-SPD_1160;Dbxref=NCBI_GP:ABJ54792.1;Name=ABJ54792.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1308%3B equivalent gene in S.pneumoniae R6 %3D spr1183%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1160;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54792.1;transl_table=11
CP000410.2	Genbank	gene	1189942	1190379	.	+	.	ID=gene-SPD_1161;Name=SPD_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1161
CP000410.2	Genbank	CDS	1189942	1190379	.	+	0	ID=cds-ABJ54451.1;Parent=gene-SPD_1161;Dbxref=NCBI_GP:ABJ54451.1;Name=ABJ54451.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1184;gbkey=CDS;locus_tag=SPD_1161;product=hypothetical protein;protein_id=ABJ54451.1;transl_table=11
CP000410.2	Genbank	gene	1190670	1190873	.	-	.	ID=gene-SPD_1162;Name=SPD_1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1162
CP000410.2	Genbank	CDS	1190670	1190873	.	-	0	ID=cds-ABJ55030.1;Parent=gene-SPD_1162;Dbxref=NCBI_GP:ABJ55030.1;Name=ABJ55030.1;Note=This gene is a fragement of the glucokinase genes 3' end. equivalent gene in S.pneumoniae R6 %3D spr1185;gbkey=CDS;locus_tag=SPD_1162;product=hypothetical protein;protein_id=ABJ55030.1;transl_table=11
CP000410.2	Genbank	gene	1190891	1191622	.	-	.	ID=gene-SPD_1163;Name=SPD_1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1163
CP000410.2	Genbank	CDS	1190891	1191622	.	-	0	ID=cds-ABJ53715.1;Parent=gene-SPD_1163;Dbxref=NCBI_GP:ABJ53715.1;Name=ABJ53715.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1676%3B equivalent gene in S.pneumoniae R6 %3D spr1186%3B identified by match to protein family HMM PF00701;gbkey=CDS;locus_tag=SPD_1163;product=N-acetylneuraminate lyase%2C putative;protein_id=ABJ53715.1;transl_table=11
CP000410.2	Genbank	gene	1191840	1192247	.	-	.	ID=gene-SPD_1164;Name=cdd-2;gbkey=Gene;gene=cdd-2;gene_biotype=protein_coding;locus_tag=SPD_1164
CP000410.2	Genbank	CDS	1191840	1192247	.	-	0	ID=cds-ABJ54814.1;Parent=gene-SPD_1164;Dbxref=NCBI_GP:ABJ54814.1;Name=ABJ54814.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1188%3B identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354;gbkey=CDS;gene=cdd-2;locus_tag=SPD_1164;product=cytidine deaminase;protein_id=ABJ54814.1;transl_table=11
CP000410.2	Genbank	gene	1192535	1193023	.	-	.	ID=gene-SPD_1165;Name=SPD_1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1165
CP000410.2	Genbank	CDS	1192535	1193023	.	-	0	ID=cds-ABJ53780.1;Parent=gene-SPD_1165;Dbxref=NCBI_GP:ABJ53780.1;Name=ABJ53780.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1189;gbkey=CDS;locus_tag=SPD_1165;product=hypothetical protein;protein_id=ABJ53780.1;transl_table=11
CP000410.2	Genbank	gene	1193028	1194437	.	-	.	ID=gene-SPD_1166;Name=SPD_1166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1166
CP000410.2	Genbank	CDS	1193028	1194437	.	-	0	ID=cds-ABJ54125.1;Parent=gene-SPD_1166;Dbxref=NCBI_GP:ABJ54125.1;Name=ABJ54125.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1190;gbkey=CDS;locus_tag=SPD_1166;product=hypothetical protein;protein_id=ABJ54125.1;transl_table=11
CP000410.2	Genbank	gene	1194447	1196429	.	-	.	ID=gene-SPD_1167;Name=SPD_1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1167
CP000410.2	Genbank	CDS	1194447	1196429	.	-	0	ID=cds-ABJ54002.1;Parent=gene-SPD_1167;Dbxref=NCBI_GP:ABJ54002.1;Name=ABJ54002.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1191%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;locus_tag=SPD_1167;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54002.1;transl_table=11
CP000410.2	Genbank	gene	1196442	1197293	.	-	.	ID=gene-SPD_1168;Name=SPD_1168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1168
CP000410.2	Genbank	CDS	1196442	1197293	.	-	0	ID=cds-ABJ54067.1;Parent=gene-SPD_1168;Dbxref=NCBI_GP:ABJ54067.1;Name=ABJ54067.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1192%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1168;product=oligopeptide ABC transporter%2C pemease protein;protein_id=ABJ54067.1;transl_table=11
CP000410.2	Genbank	gene	1197310	1198260	.	-	.	ID=gene-SPD_1169;Name=SPD_1169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1169
CP000410.2	Genbank	CDS	1197310	1198260	.	-	0	ID=cds-ABJ54952.1;Parent=gene-SPD_1169;Dbxref=NCBI_GP:ABJ54952.1;Name=ABJ54952.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1193%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1169;product=oligopeptide ABC transporter%2C permease protein;protein_id=ABJ54952.1;transl_table=11
CP000410.2	Genbank	gene	1198370	1199998	.	-	.	ID=gene-SPD_1170;Name=SPD_1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1170
CP000410.2	Genbank	CDS	1198370	1199998	.	-	0	ID=cds-ABJ53635.1;Parent=gene-SPD_1170;Dbxref=NCBI_GP:ABJ53635.1;Name=ABJ53635.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1194%3B identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=SPD_1170;product=oligopeptide ABC transporter%2Coligopeptide-binding protein;protein_id=ABJ53635.1;transl_table=11
CP000410.2	Genbank	gene	1200080	1201003	.	-	.	ID=gene-SPD_1171;Name=SPD_1171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1171
CP000410.2	Genbank	CDS	1200080	1201003	.	-	0	ID=cds-ABJ54929.1;Parent=gene-SPD_1171;Dbxref=NCBI_GP:ABJ54929.1;Name=ABJ54929.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1195%3B identified by match to protein family HMM PF07646;gbkey=CDS;locus_tag=SPD_1171;product=hypothetical protein;protein_id=ABJ54929.1;transl_table=11
CP000410.2	Genbank	gene	1201027	1201725	.	-	.	ID=gene-SPD_1172;Name=nanE-2;gbkey=Gene;gene=nanE-2;gene_biotype=protein_coding;locus_tag=SPD_1172
CP000410.2	Genbank	CDS	1201027	1201725	.	-	0	ID=cds-ABJ54777.1;Parent=gene-SPD_1172;Dbxref=NCBI_GP:ABJ54777.1;Name=ABJ54777.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1685%3B equivalent gene in S.pneumoniae R6 %3D spr1196%3B identified by match to protein family HMM PF04131;gbkey=CDS;gene=nanE-2;locus_tag=SPD_1172;product=N-acetylmannosamine-6-phosphate 2-epimerase 2%2C putative;protein_id=ABJ54777.1;transl_table=11
CP000410.2	Genbank	pseudogene	1201772	1202035	.	-	.	ID=gene-SPD_1173;Name=SPD_1173;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1086%3B equivalent gene in S.pneumoniae R6 %3D spr1197%3B IS1381%2C transposase OrfB%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1173;pseudo=true
CP000410.2	Genbank	gene	1202618	1202839	.	-	.	ID=gene-SPD_1174;Name=SPD_1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1174
CP000410.2	Genbank	CDS	1202618	1202839	.	-	0	ID=cds-ABJ55511.1;Parent=gene-SPD_1174;Dbxref=NCBI_GP:ABJ55511.1;Name=ABJ55511.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1199;gbkey=CDS;locus_tag=SPD_1174;product=hypothetical protein;protein_id=ABJ55511.1;transl_table=11
CP000410.2	Genbank	gene	1203903	1205222	.	-	.	ID=gene-SPD_1175;Name=SPD_1175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1175
CP000410.2	Genbank	CDS	1203903	1205222	.	-	0	ID=cds-ABJ53668.1;Parent=gene-SPD_1175;Dbxref=NCBI_GP:ABJ53668.1;Name=ABJ53668.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1340%3B equivalent gene in S.pneumoniae R6 %3D spr1201;gbkey=CDS;locus_tag=SPD_1175;product=membrane protein%2C putative;protein_id=ABJ53668.1;transl_table=11
CP000410.2	Genbank	gene	1205225	1205965	.	-	.	ID=gene-SPD_1176;Name=SPD_1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1176
CP000410.2	Genbank	CDS	1205225	1205965	.	-	0	ID=cds-ABJ54338.1;Parent=gene-SPD_1176;Dbxref=NCBI_GP:ABJ54338.1;Name=ABJ54338.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1341%3B equivalent gene in S.pneumoniae R6 %3D spr1202%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1176;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54338.1;transl_table=11
CP000410.2	Genbank	gene	1205980	1207587	.	-	.	ID=gene-SPD_1177;Name=SPD_1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1177
CP000410.2	Genbank	CDS	1205980	1207587	.	-	0	ID=cds-ABJ55417.1;Parent=gene-SPD_1177;Dbxref=NCBI_GP:ABJ55417.1;Name=ABJ55417.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1342%3B equivalent gene in S.pneumoniae R6 %3D spr1203%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1177;product=drug efflux ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ55417.1;transl_table=11
CP000410.2	Genbank	gene	1207584	1209524	.	-	.	ID=gene-SPD_1178;Name=SPD_1178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1178
CP000410.2	Genbank	CDS	1207584	1209524	.	-	0	ID=cds-ABJ54903.1;Parent=gene-SPD_1178;Dbxref=NCBI_GP:ABJ54903.1;Name=ABJ54903.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1343%3B equivalent gene in S.pneumoniae R6 %3D spr1204%3B identified by match to protein family HMM PF00326;gbkey=CDS;locus_tag=SPD_1178;product=prolyl oligopeptidase family protein;protein_id=ABJ54903.1;transl_table=11
CP000410.2	Genbank	gene	1209557	1212166	.	-	.	ID=gene-SPD_1179;Name=SPD_1179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1179
CP000410.2	Genbank	CDS	1209557	1212166	.	-	0	ID=cds-ABJ53979.1;Parent=gene-SPD_1179;Dbxref=NCBI_GP:ABJ53979.1;Name=ABJ53979.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1344%3B equivalent gene in S.pneumoniae R6 %3D spr1205%3B identified by match to protein family HMM PF05147;gbkey=CDS;locus_tag=SPD_1179;product=hypothetical protein;protein_id=ABJ53979.1;transl_table=11
CP000410.2	Genbank	gene	1212684	1213271	.	-	.	ID=gene-SPD_1180;Name=SPD_1180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1180
CP000410.2	Genbank	CDS	1212684	1213271	.	-	0	ID=cds-ABJ53991.1;Parent=gene-SPD_1180;Dbxref=NCBI_GP:ABJ53991.1;Name=ABJ53991.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1346%3B equivalent gene in S.pneumoniae R6 %3D spr1206%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_1180;product=CAAX amino terminal protease family protein;protein_id=ABJ53991.1;transl_table=11
CP000410.2	Genbank	gene	1213364	1213507	.	-	.	ID=gene-SPD_1181;Name=SPD_1181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1181
CP000410.2	Genbank	CDS	1213364	1213507	.	-	0	ID=cds-ABJ54312.1;Parent=gene-SPD_1181;Dbxref=NCBI_GP:ABJ54312.1;Name=ABJ54312.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1333;gbkey=CDS;locus_tag=SPD_1181;product=hypothetical protein;protein_id=ABJ54312.1;transl_table=11
CP000410.2	Genbank	gene	1213520	1213900	.	-	.	ID=gene-SPD_1182;Name=SPD_1182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1182
CP000410.2	Genbank	CDS	1213520	1213900	.	-	0	ID=cds-ABJ55176.1;Parent=gene-SPD_1182;Dbxref=NCBI_GP:ABJ55176.1;Name=ABJ55176.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1348%3B equivalent gene in S.pneumoniae R6 %3D spr1207;gbkey=CDS;locus_tag=SPD_1182;product=hypothetical protein;protein_id=ABJ55176.1;transl_table=11
CP000410.2	Genbank	gene	1213955	1214233	.	-	.	ID=gene-SPD_1183;Name=SPD_1183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1183
CP000410.2	Genbank	CDS	1213955	1214233	.	-	0	ID=cds-ABJ54585.1;Parent=gene-SPD_1183;Dbxref=NCBI_GP:ABJ54585.1;Name=ABJ54585.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1349%3B equivalent gene in S.pneumoniae R6 %3D spr1208;gbkey=CDS;locus_tag=SPD_1183;product=hypothetical protein;protein_id=ABJ54585.1;transl_table=11
CP000410.2	Genbank	gene	1214241	1214495	.	-	.	ID=gene-SPD_1184;Name=SPD_1184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1184
CP000410.2	Genbank	CDS	1214241	1214495	.	-	0	ID=cds-ABJ54203.1;Parent=gene-SPD_1184;Dbxref=NCBI_GP:ABJ54203.1;Name=ABJ54203.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1350%3B equivalent gene in S.pneumoniae R6 %3D spr1209%3B identified by match to protein family HMM PF06970;gbkey=CDS;locus_tag=SPD_1184;product=hypothetical protein;protein_id=ABJ54203.1;transl_table=11
CP000410.2	Genbank	gene	1214492	1214665	.	-	.	ID=gene-SPD_1185;Name=SPD_1185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1185
CP000410.2	Genbank	CDS	1214492	1214665	.	-	0	ID=cds-ABJ55231.1;Parent=gene-SPD_1185;Dbxref=NCBI_GP:ABJ55231.1;Name=ABJ55231.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1210;gbkey=CDS;locus_tag=SPD_1185;product=hypothetical protein;protein_id=ABJ55231.1;transl_table=11
CP000410.2	Genbank	gene	1214641	1214823	.	+	.	ID=gene-SPD_1186;Name=SPD_1186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1186
CP000410.2	Genbank	CDS	1214641	1214823	.	+	0	ID=cds-ABJ53916.1;Parent=gene-SPD_1186;Dbxref=NCBI_GP:ABJ53916.1;Name=ABJ53916.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1186;product=hypothetical protein;protein_id=ABJ53916.1;transl_table=11
CP000410.2	Genbank	gene	1214853	1215221	.	-	.	ID=gene-SPD_1187;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SPD_1187
CP000410.2	Genbank	CDS	1214853	1215221	.	-	0	ID=cds-ABJ54917.1;Parent=gene-SPD_1187;Dbxref=NCBI_GP:ABJ54917.1;Name=ABJ54917.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1354%3B equivalent gene in S.pneumoniae R6 %3D spr1211%3B identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855;gbkey=CDS;gene=rplL;locus_tag=SPD_1187;product=ribosomal protein L7/L12;protein_id=ABJ54917.1;transl_table=11
CP000410.2	Genbank	gene	1215297	1215797	.	-	.	ID=gene-SPD_1188;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SPD_1188
CP000410.2	Genbank	CDS	1215297	1215797	.	-	0	ID=cds-ABJ54946.1;Parent=gene-SPD_1188;Dbxref=NCBI_GP:ABJ54946.1;Name=ABJ54946.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1355%3B equivalent gene in S.pneumoniae R6 %3D spr1212%3B identified by match to protein family HMM PF00466;gbkey=CDS;gene=rplJ;locus_tag=SPD_1188;product=ribosomal protein L10;protein_id=ABJ54946.1;transl_table=11
CP000410.2	Genbank	gene	1215802	1216026	.	+	.	ID=gene-SPD_1189;Name=SPD_1189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1189
CP000410.2	Genbank	CDS	1215802	1216026	.	+	0	ID=cds-ABJ55071.1;Parent=gene-SPD_1189;Dbxref=NCBI_GP:ABJ55071.1;Name=ABJ55071.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1213;gbkey=CDS;locus_tag=SPD_1189;product=hypothetical protein;protein_id=ABJ55071.1;transl_table=11
CP000410.2	Genbank	gene	1216047	1217306	.	-	.	ID=gene-SPD_1190;Name=SPD_1190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1190
CP000410.2	Genbank	CDS	1216047	1217306	.	-	0	ID=cds-ABJ53803.1;Parent=gene-SPD_1190;Dbxref=NCBI_GP:ABJ53803.1;Name=ABJ53803.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1356%3B equivalent gene in S.pneumoniae R6 %3D spr1214%3B identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=SPD_1190;product=Atz/Trz family protein;protein_id=ABJ53803.1;transl_table=11
CP000410.2	Genbank	gene	1217608	1219359	.	-	.	ID=gene-SPD_1191;Name=SPD_1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1191
CP000410.2	Genbank	CDS	1217608	1219359	.	-	0	ID=cds-ABJ54845.1;Parent=gene-SPD_1191;Dbxref=NCBI_GP:ABJ54845.1;Name=ABJ54845.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1357%3B equivalent gene in S.pneumoniae R6 %3D spr1215%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1191;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ54845.1;transl_table=11
CP000410.2	Genbank	gene	1219361	1221085	.	-	.	ID=gene-SPD_1192;Name=SPD_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1192
CP000410.2	Genbank	CDS	1219361	1221085	.	-	0	ID=cds-ABJ54519.1;Parent=gene-SPD_1192;Dbxref=NCBI_GP:ABJ54519.1;Name=ABJ54519.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1358%3B equivalent gene in S.pneumoniae R6 %3D spr1216%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1192;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ54519.1;transl_table=11
CP000410.2	Genbank	gene	1221143	1222081	.	-	.	ID=gene-SPD_1193;Name=msrAB1;gbkey=Gene;gene=msrAB1;gene_biotype=protein_coding;locus_tag=SPD_1193
CP000410.2	Genbank	CDS	1221143	1222081	.	-	0	ID=cds-ABJ54659.1;Parent=gene-SPD_1193;Dbxref=NCBI_GP:ABJ54659.1;Name=ABJ54659.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1359%3B equivalent gene in S.pneumoniae R6 %3D spr1217%3B identified by match to protein family HMM PF01625%3B match to protein family HMM PF01641%3B match to protein family HMM TIGR00357%3B match to protein family HMM TIGR00401;gbkey=CDS;gene=msrAB1;locus_tag=SPD_1193;product=peptide methionine sulfoxide reductase msrA/msrB 1;protein_id=ABJ54659.1;transl_table=11
CP000410.2	Genbank	gene	1222377	1223246	.	-	.	ID=gene-SPD_1194;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=SPD_1194
CP000410.2	Genbank	CDS	1222377	1223246	.	-	0	ID=cds-ABJ55397.1;Parent=gene-SPD_1194;Dbxref=NCBI_GP:ABJ55397.1;Name=ABJ55397.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1360%3B equivalent gene in S.pneumoniae R6 %3D spr1218%3B identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR00191;gbkey=CDS;gene=thrB;locus_tag=SPD_1194;product=homoserine kinase;protein_id=ABJ55397.1;transl_table=11
CP000410.2	Genbank	gene	1223248	1224534	.	-	.	ID=gene-SPD_1195;Name=hom;gbkey=Gene;gene=hom;gene_biotype=protein_coding;locus_tag=SPD_1195
CP000410.2	Genbank	CDS	1223248	1224534	.	-	0	ID=cds-ABJ54540.1;Parent=gene-SPD_1195;Dbxref=NCBI_GP:ABJ54540.1;Name=ABJ54540.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1361%3B equivalent gene in S.pneumoniae R6 %3D spr1219%3B identified by match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447;gbkey=CDS;gene=hom;locus_tag=SPD_1195;product=homoserine dehydrogenase;protein_id=ABJ54540.1;transl_table=11
CP000410.2	Genbank	gene	1224685	1225422	.	-	.	ID=gene-SPD_1196;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=SPD_1196
CP000410.2	Genbank	CDS	1224685	1225422	.	-	0	ID=cds-ABJ53985.1;Parent=gene-SPD_1196;Dbxref=NCBI_GP:ABJ53985.1;Name=ABJ53985.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1362%3B equivalent gene in S.pneumoniae R6 %3D spr1220%3B identified by match to protein family HMM PF05389;gbkey=CDS;gene=mecA;locus_tag=SPD_1196;product=adapter protein mecA;protein_id=ABJ53985.1;transl_table=11
CP000410.2	Genbank	gene	1225564	1226598	.	-	.	ID=gene-SPD_1197;Name=SPD_1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1197
CP000410.2	Genbank	CDS	1225564	1226598	.	-	0	ID=cds-ABJ54310.1;Parent=gene-SPD_1197;Dbxref=NCBI_GP:ABJ54310.1;Name=ABJ54310.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1363%3B equivalent gene in S.pneumoniae R6 %3D spr1221;gbkey=CDS;locus_tag=SPD_1197;product=hypothetical protein;protein_id=ABJ54310.1;transl_table=11
CP000410.2	Genbank	gene	1226627	1228060	.	-	.	ID=gene-SPD_1198;Name=SPD_1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1198
CP000410.2	Genbank	CDS	1226627	1228060	.	-	0	ID=cds-ABJ54015.1;Parent=gene-SPD_1198;Dbxref=NCBI_GP:ABJ54015.1;Name=ABJ54015.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1364%3B equivalent gene in S.pneumoniae R6 %3D spr1222;gbkey=CDS;locus_tag=SPD_1198;product=membrane protein%2C putative;protein_id=ABJ54015.1;transl_table=11
CP000410.2	Genbank	gene	1228076	1229062	.	-	.	ID=gene-SPD_1199;Name=SPD_1199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1199
CP000410.2	Genbank	CDS	1228076	1229062	.	-	0	ID=cds-ABJ55056.1;Parent=gene-SPD_1199;Dbxref=NCBI_GP:ABJ55056.1;Name=ABJ55056.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1365%3B equivalent gene in S.pneumoniae R6 %3D spr1223%3B identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=SPD_1199;product=glycosyl transferase%2C group 2 family protein;protein_id=ABJ55056.1;transl_table=11
CP000410.2	Genbank	gene	1229064	1230164	.	-	.	ID=gene-SPD_1200;Name=SPD_1200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1200
CP000410.2	Genbank	CDS	1229064	1230164	.	-	0	ID=cds-ABJ54871.1;Parent=gene-SPD_1200;Dbxref=NCBI_GP:ABJ54871.1;Name=ABJ54871.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1366%3B equivalent gene in S.pneumoniae R6 %3D spr1224%3B identified by match to protein family HMM PF00534;gbkey=CDS;locus_tag=SPD_1200;product=glycosyl transferase%2C group 1 family protein;protein_id=ABJ54871.1;transl_table=11
CP000410.2	Genbank	gene	1230157	1231002	.	-	.	ID=gene-SPD_1201;Name=licD3;gbkey=Gene;gene=licD3;gene_biotype=protein_coding;locus_tag=SPD_1201
CP000410.2	Genbank	CDS	1230157	1231002	.	-	0	ID=cds-ABJ54049.1;Parent=gene-SPD_1201;Dbxref=NCBI_GP:ABJ54049.1;Name=ABJ54049.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1367%3B equivalent gene in S.pneumoniae R6 %3D spr1225%3B identified by match to protein family HMM PF04991;gbkey=CDS;gene=licD3;locus_tag=SPD_1201;product=phosphotransferase LicD3;protein_id=ABJ54049.1;transl_table=11
CP000410.2	Genbank	gene	1231281	1232555	.	-	.	ID=gene-SPD_1202;Name=psr;gbkey=Gene;gene=psr;gene_biotype=protein_coding;locus_tag=SPD_1202
CP000410.2	Genbank	CDS	1231281	1232555	.	-	0	ID=cds-ABJ54513.1;Parent=gene-SPD_1202;Dbxref=NCBI_GP:ABJ54513.1;Name=ABJ54513.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1368%3B equivalent gene in S.pneumoniae R6 %3D spr1226%3B identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350;gbkey=CDS;gene=psr;locus_tag=SPD_1202;product=Psr protein;protein_id=ABJ54513.1;transl_table=11
CP000410.2	Genbank	gene	1232552	1233400	.	-	.	ID=gene-SPD_1203;Name=SPD_1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1203
CP000410.2	Genbank	CDS	1232552	1233400	.	-	0	ID=cds-ABJ53769.1;Parent=gene-SPD_1203;Dbxref=NCBI_GP:ABJ53769.1;Name=ABJ53769.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1369%3B equivalent gene in S.pneumoniae R6 %3D spr1227%3B identified by match to protein family HMM PF00800%3B match to protein family HMM PF01842;gbkey=CDS;locus_tag=SPD_1203;product=prephenate dehydratase;protein_id=ABJ53769.1;transl_table=11
CP000410.2	Genbank	gene	1233397	1233873	.	-	.	ID=gene-SPD_1204;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SPD_1204
CP000410.2	Genbank	CDS	1233397	1233873	.	-	0	ID=cds-ABJ55366.1;Parent=gene-SPD_1204;Dbxref=NCBI_GP:ABJ55366.1;Name=ABJ55366.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1370%3B equivalent gene in S.pneumoniae R6 %3D spr1228%3B identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;locus_tag=SPD_1204;product=shikimate kinase;protein_id=ABJ55366.1;transl_table=11
CP000410.2	Genbank	gene	1233866	1235149	.	-	.	ID=gene-SPD_1205;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=SPD_1205
CP000410.2	Genbank	CDS	1233866	1235149	.	-	0	ID=cds-ABJ54185.1;Parent=gene-SPD_1205;Dbxref=NCBI_GP:ABJ54185.1;Name=ABJ54185.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1371%3B equivalent gene in S.pneumoniae R6 %3D spr1229%3B identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356;gbkey=CDS;gene=aroA;locus_tag=SPD_1205;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=ABJ54185.1;transl_table=11
CP000410.2	Genbank	gene	1235241	1235579	.	-	.	ID=gene-SPD_1206;Name=SPD_1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1206
CP000410.2	Genbank	CDS	1235241	1235579	.	-	0	ID=cds-ABJ53656.1;Parent=gene-SPD_1206;Dbxref=NCBI_GP:ABJ53656.1;Name=ABJ53656.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1372%3B equivalent gene in S.pneumoniae R6 %3D spr1230%3B identified by match to protein family HMM PF06133;gbkey=CDS;locus_tag=SPD_1206;product=hypothetical protein;protein_id=ABJ53656.1;transl_table=11
CP000410.2	Genbank	gene	1235590	1236693	.	-	.	ID=gene-SPD_1207;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=SPD_1207
CP000410.2	Genbank	CDS	1235590	1236693	.	-	0	ID=cds-ABJ54511.1;Parent=gene-SPD_1207;Dbxref=NCBI_GP:ABJ54511.1;Name=ABJ54511.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1373%3B equivalent gene in S.pneumoniae R6 %3D spr1231%3B identified by match to protein family HMM PF02153%3B match to protein family HMM PF03446;gbkey=CDS;gene=tyrA;locus_tag=SPD_1207;product=prephenate dehydrogenase;protein_id=ABJ54511.1;transl_table=11
CP000410.2	Genbank	gene	1236703	1237869	.	-	.	ID=gene-SPD_1208;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=SPD_1208
CP000410.2	Genbank	CDS	1236703	1237869	.	-	0	ID=cds-ABJ54313.1;Parent=gene-SPD_1208;Dbxref=NCBI_GP:ABJ54313.1;Name=ABJ54313.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1374%3B equivalent gene in S.pneumoniae R6 %3D spr1232%3B identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033;gbkey=CDS;gene=aroC;locus_tag=SPD_1208;product=chorismate synthase;protein_id=ABJ54313.1;transl_table=11
CP000410.2	Genbank	gene	1237879	1238946	.	-	.	ID=gene-SPD_1209;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SPD_1209
CP000410.2	Genbank	CDS	1237879	1238946	.	-	0	ID=cds-ABJ55156.1;Parent=gene-SPD_1209;Dbxref=NCBI_GP:ABJ55156.1;Name=ABJ55156.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1375%3B equivalent gene in S.pneumoniae R6 %3D spr1233%3B identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357;gbkey=CDS;gene=aroB;locus_tag=SPD_1209;product=3-dehydroquinate synthase;protein_id=ABJ55156.1;transl_table=11
CP000410.2	Genbank	gene	1238965	1239819	.	-	.	ID=gene-SPD_1210;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=SPD_1210
CP000410.2	Genbank	CDS	1238965	1239819	.	-	0	ID=cds-ABJ54332.1;Parent=gene-SPD_1210;Dbxref=NCBI_GP:ABJ54332.1;Name=ABJ54332.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1376%3B equivalent gene in S.pneumoniae R6 %3D spr1234%3B identified by match to protein family HMM PF01488%3B match to protein family HMM TIGR00507;gbkey=CDS;gene=aroE;locus_tag=SPD_1210;product=shikimate 5-dehydrogenase;protein_id=ABJ54332.1;transl_table=11
CP000410.2	Genbank	gene	1239809	1240486	.	-	.	ID=gene-SPD_1211;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=SPD_1211
CP000410.2	Genbank	CDS	1239809	1240486	.	-	0	ID=cds-ABJ55361.1;Parent=gene-SPD_1211;Dbxref=NCBI_GP:ABJ55361.1;Name=ABJ55361.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1377%3B equivalent gene in S.pneumoniae R6 %3D spr1235%3B identified by match to protein family HMM PF01487%3B match to protein family HMM TIGR01093;gbkey=CDS;gene=aroD;locus_tag=SPD_1211;product=3-dehydroquinate dehydratase%2C type I;protein_id=ABJ55361.1;transl_table=11
CP000410.2	Genbank	gene	1240483	1241655	.	-	.	ID=gene-SPD_1212;Name=SPD_1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1212
CP000410.2	Genbank	CDS	1240483	1241655	.	-	0	ID=cds-ABJ54478.1;Parent=gene-SPD_1212;Dbxref=NCBI_GP:ABJ54478.1;Name=ABJ54478.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1378%3B equivalent gene in S.pneumoniae R6 %3D spr1236;gbkey=CDS;locus_tag=SPD_1212;product=hypothetical protein;protein_id=ABJ54478.1;transl_table=11
CP000410.2	Genbank	gene	1242333	1243967	.	-	.	ID=gene-SPD_1213;Name=SPD_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1213
CP000410.2	Genbank	CDS	1242333	1243967	.	-	0	ID=cds-ABJ54808.1;Parent=gene-SPD_1213;Dbxref=NCBI_GP:ABJ54808.1;Name=ABJ54808.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1380%3B equivalent gene in S.pneumoniae R6 %3D spr1237;gbkey=CDS;locus_tag=SPD_1213;product=membrane protein%2C putative;protein_id=ABJ54808.1;transl_table=11
CP000410.2	Genbank	gene	1243948	1244697	.	-	.	ID=gene-SPD_1214;Name=SPD_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1214
CP000410.2	Genbank	CDS	1243948	1244697	.	-	0	ID=cds-ABJ53731.1;Parent=gene-SPD_1214;Dbxref=NCBI_GP:ABJ53731.1;Name=ABJ53731.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1381%3B equivalent gene in S.pneumoniae R6 %3D spr1238%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1214;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ53731.1;transl_table=11
CP000410.2	Genbank	gene	1244875	1246329	.	+	.	ID=gene-SPD_1215;Name=amy;gbkey=Gene;gene=amy;gene_biotype=protein_coding;locus_tag=SPD_1215
CP000410.2	Genbank	CDS	1244875	1246329	.	+	0	ID=cds-ABJ54813.1;Parent=gene-SPD_1215;Dbxref=NCBI_GP:ABJ54813.1;Name=ABJ54813.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1382%3B equivalent gene in S.pneumoniae R6 %3D spr1239%3B identified by match to protein family HMM PF00128;gbkey=CDS;gene=amy;locus_tag=SPD_1215;product=alpha-amylase;protein_id=ABJ54813.1;transl_table=11
CP000410.2	Genbank	gene	1246419	1249037	.	-	.	ID=gene-SPD_1216;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=SPD_1216
CP000410.2	Genbank	CDS	1246419	1249037	.	-	0	ID=cds-ABJ53909.1;Parent=gene-SPD_1216;Dbxref=NCBI_GP:ABJ53909.1;Name=ABJ53909.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1383%3B equivalent gene in S.pneumoniae R6 %3D spr1240%3B identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344;gbkey=CDS;gene=alaS;locus_tag=SPD_1216;product=alanyl-tRNA synthetase;protein_id=ABJ53909.1;transl_table=11
CP000410.2	Genbank	gene	1249059	1249544	.	-	.	ID=gene-SPD_1217;Name=SPD_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1217
CP000410.2	Genbank	CDS	1249059	1249544	.	-	0	ID=cds-ABJ53710.1;Parent=gene-SPD_1217;Dbxref=NCBI_GP:ABJ53710.1;Name=ABJ53710.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1384%3B equivalent gene in S.pneumoniae R6 %3D spr1241%3B identified by match to protein family HMM PF04525;gbkey=CDS;locus_tag=SPD_1217;product=hypothetical protein;protein_id=ABJ53710.1;transl_table=11
CP000410.2	Genbank	gene	1250319	1251389	.	-	.	ID=gene-SPD_1218;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=SPD_1218
CP000410.2	Genbank	CDS	1250319	1251389	.	-	0	ID=cds-ABJ54572.1;Parent=gene-SPD_1218;Dbxref=NCBI_GP:ABJ54572.1;Name=ABJ54572.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1386%3B equivalent gene in S.pneumoniae R6 %3D spr1243%3B identified by match to protein family HMM PF01547;gbkey=CDS;gene=potD;locus_tag=SPD_1218;product=spermidine/putrescine ABC transporter%2C spermidine/putrescine-binding protein;protein_id=ABJ54572.1;transl_table=11
CP000410.2	Genbank	gene	1251386	1252159	.	-	.	ID=gene-SPD_1219;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=SPD_1219
CP000410.2	Genbank	CDS	1251386	1252159	.	-	0	ID=cds-ABJ55388.1;Parent=gene-SPD_1219;Dbxref=NCBI_GP:ABJ55388.1;Name=ABJ55388.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1387%3B equivalent gene in S.pneumoniae R6 %3D spr1244%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=potC;locus_tag=SPD_1219;product=spermidine/putrescine ABC transporter%2C permease protein;protein_id=ABJ55388.1;transl_table=11
CP000410.2	Genbank	gene	1252156	1252962	.	-	.	ID=gene-SPD_1220;Name=potH;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=SPD_1220
CP000410.2	Genbank	CDS	1252156	1252962	.	-	0	ID=cds-ABJ53835.1;Parent=gene-SPD_1220;Dbxref=NCBI_GP:ABJ53835.1;Name=ABJ53835.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1388%3B equivalent gene in S.pneumoniae R6 %3D spr1245%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=potH;locus_tag=SPD_1220;product=spermidine/putrescine ABC transporter%2C permease protein;protein_id=ABJ53835.1;transl_table=11
CP000410.2	Genbank	gene	1252943	1254100	.	-	.	ID=gene-SPD_1221;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=SPD_1221
CP000410.2	Genbank	CDS	1252943	1254100	.	-	0	ID=cds-ABJ54695.1;Parent=gene-SPD_1221;Dbxref=NCBI_GP:ABJ54695.1;Name=ABJ54695.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1389%3B equivalent gene in S.pneumoniae R6 %3D spr1246%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=potA;locus_tag=SPD_1221;product=spermidine/putrescine ABC transporter%2C ATP-binding protein;protein_id=ABJ54695.1;transl_table=11
CP000410.2	Genbank	gene	1254159	1255109	.	-	.	ID=gene-SPD_1222;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SPD_1222
CP000410.2	Genbank	CDS	1254159	1255109	.	-	0	ID=cds-ABJ54032.1;Parent=gene-SPD_1222;Dbxref=NCBI_GP:ABJ54032.1;Name=ABJ54032.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1390%3B equivalent gene in S.pneumoniae R6 %3D spr1247%3B identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179;gbkey=CDS;gene=murB;locus_tag=SPD_1222;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=ABJ54032.1;transl_table=11
CP000410.2	Genbank	gene	1255221	1255973	.	-	.	ID=gene-SPD_1223;Name=SPD_1223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1223
CP000410.2	Genbank	CDS	1255221	1255973	.	-	0	ID=cds-ABJ54492.1;Parent=gene-SPD_1223;Dbxref=NCBI_GP:ABJ54492.1;Name=ABJ54492.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1391%3B equivalent gene in S.pneumoniae R6 %3D spr1248;gbkey=CDS;locus_tag=SPD_1223;product=membrane protein%2C putative;protein_id=ABJ54492.1;transl_table=11
CP000410.2	Genbank	gene	1255983	1256714	.	-	.	ID=gene-SPD_1224;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=SPD_1224
CP000410.2	Genbank	CDS	1255983	1256714	.	-	0	ID=cds-ABJ55122.1;Parent=gene-SPD_1224;Dbxref=NCBI_GP:ABJ55122.1;Name=ABJ55122.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1392%3B equivalent gene in S.pneumoniae R6 %3D spr1249%3B identified by match to protein family HMM PF03306%3B match to protein family HMM TIGR01252;gbkey=CDS;gene=budA;locus_tag=SPD_1224;product=alpha-acetolactate decarboxylase;protein_id=ABJ55122.1;transl_table=11
CP000410.2	Genbank	gene	1256856	1258127	.	+	.	ID=gene-SPD_1225;Name=SPD_1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1225
CP000410.2	Genbank	CDS	1256856	1258127	.	+	0	ID=cds-ABJ53800.1;Parent=gene-SPD_1225;Dbxref=NCBI_GP:ABJ53800.1;Name=ABJ53800.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1393%3B equivalent gene in S.pneumoniae R6 %3D spr1250%3B identified by match to protein family HMM PF00392;gbkey=CDS;locus_tag=SPD_1225;product=hypothetical protein;protein_id=ABJ53800.1;transl_table=11
CP000410.2	Genbank	gene	1258147	1258962	.	-	.	ID=gene-SPD_1226;Name=SPD_1226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1226
CP000410.2	Genbank	CDS	1258147	1258962	.	-	0	ID=cds-ABJ54899.1;Parent=gene-SPD_1226;Dbxref=NCBI_GP:ABJ54899.1;Name=ABJ54899.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1394%3B equivalent gene in S.pneumoniae R6 %3D spr1251%3B identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=SPD_1226;product=amino acid ABC transporter%2C amino acid-binding protein;protein_id=ABJ54899.1;transl_table=11
CP000410.2	Genbank	gene	1259119	1259772	.	-	.	ID=gene-SPD_1227;Name=SPD_1227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1227
CP000410.2	Genbank	CDS	1259119	1259772	.	-	0	ID=cds-ABJ54105.1;Parent=gene-SPD_1227;Dbxref=NCBI_GP:ABJ54105.1;Name=ABJ54105.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1395%3B equivalent gene in S.pneumoniae R6 %3D spr1252%3B identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135;gbkey=CDS;locus_tag=SPD_1227;product=phosphate transport system regulatory protein PhoU%2C putative;protein_id=ABJ54105.1;transl_table=11
CP000410.2	Genbank	gene	1259784	1260542	.	-	.	ID=gene-SPD_1228;Name=SPD_1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1228
CP000410.2	Genbank	CDS	1259784	1260542	.	-	0	ID=cds-ABJ54717.1;Parent=gene-SPD_1228;Dbxref=NCBI_GP:ABJ54717.1;Name=ABJ54717.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1396%3B equivalent gene in S.pneumoniae R6 %3D spr1253%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972;gbkey=CDS;locus_tag=SPD_1228;product=phosphate ABC transporter%2C ATP-binding protein%2C putative;protein_id=ABJ54717.1;transl_table=11
CP000410.2	Genbank	gene	1260555	1261358	.	-	.	ID=gene-SPD_1229;Name=SPD_1229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1229
CP000410.2	Genbank	CDS	1260555	1261358	.	-	0	ID=cds-ABJ54334.1;Parent=gene-SPD_1229;Dbxref=NCBI_GP:ABJ54334.1;Name=ABJ54334.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1397%3B equivalent gene in S.pneumoniae R6 %3D spr1254%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972;gbkey=CDS;locus_tag=SPD_1229;product=phosphate ABC transporter%2C ATP-binding protein%2C putative;protein_id=ABJ54334.1;transl_table=11
CP000410.2	Genbank	gene	1261369	1262253	.	-	.	ID=gene-SPD_1230;Name=SPD_1230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1230
CP000410.2	Genbank	CDS	1261369	1262253	.	-	0	ID=cds-ABJ55117.1;Parent=gene-SPD_1230;Dbxref=NCBI_GP:ABJ55117.1;Name=ABJ55117.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1398%3B equivalent gene in S.pneumoniae R6 %3D spr1255%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974;gbkey=CDS;locus_tag=SPD_1230;product=phosphate ABC transporter%2C permease protein%2C putative;protein_id=ABJ55117.1;transl_table=11
CP000410.2	Genbank	gene	1262243	1263160	.	-	.	ID=gene-SPD_1231;Name=SPD_1231;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1231
CP000410.2	Genbank	CDS	1262243	1263160	.	-	0	ID=cds-ABJ54569.1;Parent=gene-SPD_1231;Dbxref=NCBI_GP:ABJ54569.1;Name=ABJ54569.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1399%3B equivalent gene in S.pneumoniae R6 %3D spr1256%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138;gbkey=CDS;locus_tag=SPD_1231;product=phosphate ABC transporter%2C permease protein%2C putative;protein_id=ABJ54569.1;transl_table=11
CP000410.2	Genbank	gene	1263160	1264038	.	-	.	ID=gene-SPD_1232;Name=SPD_1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1232
CP000410.2	Genbank	CDS	1263160	1264038	.	-	0	ID=cds-ABJ55381.1;Parent=gene-SPD_1232;Dbxref=NCBI_GP:ABJ55381.1;Name=ABJ55381.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1400%3B equivalent gene in S.pneumoniae R6 %3D spr1257%3B identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR02136;gbkey=CDS;locus_tag=SPD_1232;product=phosphate ABC transporter%2C phosphate-binding protein%2C putative;protein_id=ABJ55381.1;transl_table=11
CP000410.2	Genbank	gene	1264612	1265916	.	-	.	ID=gene-SPD_1233;Name=SPD_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1233
CP000410.2	Genbank	CDS	1264612	1265916	.	-	0	ID=cds-ABJ54675.1;Parent=gene-SPD_1233;Dbxref=NCBI_GP:ABJ54675.1;Name=ABJ54675.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1402%3B equivalent gene in S.pneumoniae R6 %3D spr1259%3B identified by match to protein family HMM PF01189;gbkey=CDS;locus_tag=SPD_1233;product=NOL1/NOP2/sun family protein;protein_id=ABJ54675.1;transl_table=11
CP000410.2	Genbank	gene	1265917	1266690	.	-	.	ID=gene-SPD_1234;Name=SPD_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1234
CP000410.2	Genbank	CDS	1265917	1266690	.	-	0	ID=cds-ABJ53675.1;Parent=gene-SPD_1234;Dbxref=NCBI_GP:ABJ53675.1;Name=ABJ53675.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1403%3B equivalent gene in S.pneumoniae R6 %3D spr1260%3B identified by match to protein family HMM PF00459;gbkey=CDS;locus_tag=SPD_1234;product=inositol monophosphatase family protein;protein_id=ABJ53675.1;transl_table=11
CP000410.2	Genbank	gene	1266680	1266958	.	-	.	ID=gene-SPD_1235;Name=SPD_1235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1235
CP000410.2	Genbank	CDS	1266680	1266958	.	-	0	ID=cds-ABJ54772.1;Parent=gene-SPD_1235;Dbxref=NCBI_GP:ABJ54772.1;Name=ABJ54772.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1404%3B equivalent gene in S.pneumoniae R6 %3D spr1261%3B identified by match to protein family HMM PF05256;gbkey=CDS;locus_tag=SPD_1235;product=hypothetical protein;protein_id=ABJ54772.1;transl_table=11
CP000410.2	Genbank	gene	1266958	1267359	.	-	.	ID=gene-SPD_1236;Name=spx;gbkey=Gene;gene=spx;gene_biotype=protein_coding;locus_tag=SPD_1236
CP000410.2	Genbank	CDS	1266958	1267359	.	-	0	ID=cds-ABJ53952.1;Parent=gene-SPD_1236;Dbxref=NCBI_GP:ABJ53952.1;Name=ABJ53952.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1405%3B equivalent gene in S.pneumoniae R6 %3D spr1262%3B identified by match to protein family HMM PF00462%3B match to protein family HMM PF03960%3B match to protein family HMM TIGR01617;gbkey=CDS;gene=spx;locus_tag=SPD_1236;product=regulatory protein Spx;protein_id=ABJ53952.1;transl_table=11
CP000410.2	Genbank	gene	1267569	1268186	.	-	.	ID=gene-SPD_1237;Name=SPD_1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1237
CP000410.2	Genbank	CDS	1267569	1268186	.	-	0	ID=cds-ABJ53831.1;Parent=gene-SPD_1237;Dbxref=NCBI_GP:ABJ53831.1;Name=ABJ53831.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1406%3B equivalent gene in S.pneumoniae R6 %3D spr1263%3B identified by match to protein family HMM PF07314%3B match to protein family HMM TIGR01906;gbkey=CDS;locus_tag=SPD_1237;product=membrane protein%2C putative;protein_id=ABJ53831.1;transl_table=11
CP000410.2	Genbank	gene	1268176	1268949	.	-	.	ID=gene-SPD_1238;Name=SPD_1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1238
CP000410.2	Genbank	CDS	1268176	1268949	.	-	0	ID=cds-ABJ54999.1;Parent=gene-SPD_1238;Dbxref=NCBI_GP:ABJ54999.1;Name=ABJ54999.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1407%3B equivalent gene in S.pneumoniae R6 %3D spr1264%3B identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01457%3B match to protein family HMM TIGR01460;gbkey=CDS;locus_tag=SPD_1238;product=hydrolase%2C haloacid dehalogenase-like family protein;protein_id=ABJ54999.1;transl_table=11
CP000410.2	Genbank	gene	1268960	1269697	.	-	.	ID=gene-SPD_1239;Name=SPD_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1239
CP000410.2	Genbank	CDS	1268960	1269697	.	-	0	ID=cds-ABJ54549.1;Parent=gene-SPD_1239;Dbxref=NCBI_GP:ABJ54549.1;Name=ABJ54549.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1408%3B equivalent gene in S.pneumoniae R6 %3D spr1265%3B identified by match to protein family HMM PF01643;gbkey=CDS;locus_tag=SPD_1239;product=acyl-ACP thioesterase%2C putative;protein_id=ABJ54549.1;transl_table=11
CP000410.2	Genbank	gene	1269702	1270832	.	-	.	ID=gene-SPD_1240;Name=SPD_1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1240
CP000410.2	Genbank	CDS	1269702	1270832	.	-	0	ID=cds-ABJ55352.1;Parent=gene-SPD_1240;Dbxref=NCBI_GP:ABJ55352.1;Name=ABJ55352.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1409%3B equivalent gene in S.pneumoniae R6 %3D spr1266%3B identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539;gbkey=CDS;locus_tag=SPD_1240;product=oxygen-independent coproporphyrinogen III oxidase%2C putative;protein_id=ABJ55352.1;transl_table=11
CP000410.2	Genbank	gene	1270916	1271305	.	-	.	ID=gene-SPD_1241;Name=SPD_1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1241
CP000410.2	Genbank	CDS	1270916	1271305	.	-	0	ID=cds-ABJ54984.1;Parent=gene-SPD_1241;Dbxref=NCBI_GP:ABJ54984.1;Name=ABJ54984.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1410%3B equivalent gene in S.pneumoniae R6 %3D spr1267;gbkey=CDS;locus_tag=SPD_1241;product=hypothetical protein;protein_id=ABJ54984.1;transl_table=11
CP000410.2	Genbank	gene	1271321	1271704	.	-	.	ID=gene-SPD_1242;Name=SPD_1242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1242
CP000410.2	Genbank	CDS	1271321	1271704	.	-	0	ID=cds-ABJ53686.1;Parent=gene-SPD_1242;Dbxref=NCBI_GP:ABJ53686.1;Name=ABJ53686.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1411%3B equivalent gene in S.pneumoniae R6 %3D spr1268%3B identified by match to protein family HMM PF06103;gbkey=CDS;locus_tag=SPD_1242;product=hypothetical protein;protein_id=ABJ53686.1;transl_table=11
CP000410.2	Genbank	gene	1271705	1272493	.	-	.	ID=gene-SPD_1243;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=SPD_1243
CP000410.2	Genbank	CDS	1271705	1272493	.	-	0	ID=cds-ABJ54220.1;Parent=gene-SPD_1243;Dbxref=NCBI_GP:ABJ54220.1;Name=ABJ54220.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1412%3B equivalent gene in S.pneumoniae R6 %3D spr1269%3B identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544;gbkey=CDS;gene=lgt;locus_tag=SPD_1243;product=prolipoprotein diacylglyceryl transferase;protein_id=ABJ54220.1;transl_table=11
CP000410.2	Genbank	gene	1272486	1273421	.	-	.	ID=gene-SPD_1244;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=SPD_1244
CP000410.2	Genbank	CDS	1272486	1273421	.	-	0	ID=cds-ABJ53905.1;Parent=gene-SPD_1244;Dbxref=NCBI_GP:ABJ53905.1;Name=ABJ53905.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1413%3B equivalent gene in S.pneumoniae R6 %3D spr1270%3B identified by match to protein family HMM PF02603%3B match to protein family HMM PF07475%3B match to protein family HMM TIGR00679;gbkey=CDS;gene=hprK;locus_tag=SPD_1244;product=Hpr(Ser) kinase/phosphatase;protein_id=ABJ53905.1;transl_table=11
CP000410.2	Genbank	gene	1273551	1273727	.	-	.	ID=gene-SPD_1245;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SPD_1245
CP000410.2	Genbank	CDS	1273551	1273727	.	-	0	ID=cds-ABJ55391.1;Parent=gene-SPD_1245;Dbxref=NCBI_GP:ABJ55391.1;Name=ABJ55391.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1414%3B equivalent gene in S.pneumoniae R6 %3D spr1271%3B identified by match to protein family HMM PF01165%3B match to protein family HMM TIGR00030;gbkey=CDS;gene=rpsU;locus_tag=SPD_1245;product=ribosomal protein S21;protein_id=ABJ55391.1;transl_table=11
CP000410.2	Genbank	gene	1273867	1274574	.	-	.	ID=gene-SPD_1246;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SPD_1246
CP000410.2	Genbank	CDS	1273867	1274574	.	-	0	ID=cds-ABJ54518.1;Parent=gene-SPD_1246;Dbxref=NCBI_GP:ABJ54518.1;Name=ABJ54518.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1415%3B equivalent gene in S.pneumoniae R6 %3D spr1272%3B identified by match to protein family HMM PF01182;gbkey=CDS;gene=nagB;locus_tag=SPD_1246;product=glucosamine-6-phosphate isomerase;protein_id=ABJ54518.1;transl_table=11
CP000410.2	Genbank	gene	1274725	1275753	.	+	.	ID=gene-SPD_1247;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=SPD_1247
CP000410.2	Genbank	CDS	1274725	1275753	.	+	0	ID=cds-ABJ53981.1;Parent=gene-SPD_1247;Dbxref=NCBI_GP:ABJ53981.1;Name=ABJ53981.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1416%3B equivalent gene in S.pneumoniae R6 %3D spr1273%3B identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113;gbkey=CDS;gene=queA;locus_tag=SPD_1247;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=ABJ53981.1;transl_table=11
CP000410.2	Genbank	gene	1276302	1276691	.	-	.	ID=gene-SPD_1248;Name=SPD_1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1248
CP000410.2	Genbank	CDS	1276302	1276691	.	-	0	ID=cds-ABJ55469.1;Parent=gene-SPD_1248;Dbxref=NCBI_GP:ABJ55469.1;Name=ABJ55469.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1274 The R6 gene is annotated as a choline binding protein truncation (spsA-truncation)%3B identified by match to protein family HMM PF01473;gbkey=CDS;locus_tag=SPD_1248;product=hypothetical protein;protein_id=ABJ55469.1;transl_table=11
CP000410.2	Genbank	gene	1278145	1278696	.	-	.	ID=gene-SPD_1249;Name=SPD_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1249
CP000410.2	Genbank	CDS	1278145	1278696	.	-	0	ID=cds-ABJ54707.1;Parent=gene-SPD_1249;Dbxref=NCBI_GP:ABJ54707.1;Name=ABJ54707.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1419%3B equivalent gene in S.pneumoniae R6 %3D spr1275%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1249;product=putative acetyltransferase;protein_id=ABJ54707.1;transl_table=11
CP000410.2	Genbank	gene	1278943	1279767	.	-	.	ID=gene-SPD_1250;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SPD_1250
CP000410.2	Genbank	CDS	1278943	1279767	.	-	0	ID=cds-ABJ54089.1;Parent=gene-SPD_1250;Dbxref=NCBI_GP:ABJ54089.1;Name=ABJ54089.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1420%3B equivalent gene in S.pneumoniae R6 %3D spr1276%3B identified by match to protein family HMM PF02540%3B match to protein family HMM TIGR00552;gbkey=CDS;gene=nadE;locus_tag=SPD_1250;product=NAD+ synthetase;protein_id=ABJ54089.1;transl_table=11
CP000410.2	Genbank	gene	1279764	1281224	.	-	.	ID=gene-SPD_1251;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=SPD_1251
CP000410.2	Genbank	CDS	1279764	1281224	.	-	0	ID=cds-ABJ54177.1;Parent=gene-SPD_1251;Dbxref=NCBI_GP:ABJ54177.1;Name=ABJ54177.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1421%3B equivalent gene in S.pneumoniae R6 %3D spr1277%3B identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513;gbkey=CDS;gene=pncB;locus_tag=SPD_1251;product=nicotinate phosphoribosyltransferase%2C putative;protein_id=ABJ54177.1;transl_table=11
CP000410.2	Genbank	gene	1281340	1281828	.	-	.	ID=gene-SPD_1252;Name=SPD_1252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1252
CP000410.2	Genbank	CDS	1281340	1281828	.	-	0	ID=cds-ABJ55123.1;Parent=gene-SPD_1252;Dbxref=NCBI_GP:ABJ55123.1;Name=ABJ55123.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1422%3B equivalent gene in S.pneumoniae R6 %3D spr1278;gbkey=CDS;locus_tag=SPD_1252;product=membrane protein%2C putative;protein_id=ABJ55123.1;transl_table=11
CP000410.2	Genbank	gene	1281818	1282027	.	-	.	ID=gene-SPD_1253;Name=SPD_1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1253
CP000410.2	Genbank	CDS	1281818	1282027	.	-	0	ID=cds-ABJ55315.1;Parent=gene-SPD_1253;Dbxref=NCBI_GP:ABJ55315.1;Name=ABJ55315.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1423%3B equivalent gene in S.pneumoniae R6 %3D spr1279%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_1253;product=transcriptional repressor%2C putative;protein_id=ABJ55315.1;transl_table=11
CP000410.2	Genbank	gene	1282412	1283140	.	-	.	ID=gene-SPD_1254;Name=SPD_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1254
CP000410.2	Genbank	CDS	1282412	1283140	.	-	0	ID=cds-ABJ54178.1;Parent=gene-SPD_1254;Dbxref=NCBI_GP:ABJ54178.1;Name=ABJ54178.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1424%3B equivalent gene in S.pneumoniae R6 %3D spr1280;gbkey=CDS;locus_tag=SPD_1254;product=membrane protein%2C putative;protein_id=ABJ54178.1;transl_table=11
CP000410.2	Genbank	gene	1283156	1283878	.	-	.	ID=gene-SPD_1255;Name=SPD_1255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1255
CP000410.2	Genbank	CDS	1283156	1283878	.	-	0	ID=cds-ABJ54597.1;Parent=gene-SPD_1255;Dbxref=NCBI_GP:ABJ54597.1;Name=ABJ54597.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1426%3B equivalent gene in S.pneumoniae R6 %3D spr1281%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1255;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54597.1;transl_table=11
CP000410.2	Genbank	gene	1284383	1285108	.	-	.	ID=gene-SPD_1256;Name=SPD_1256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1256
CP000410.2	Genbank	CDS	1284383	1285108	.	-	0	ID=cds-ABJ53746.1;Parent=gene-SPD_1256;Dbxref=NCBI_GP:ABJ53746.1;Name=ABJ53746.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1427%3B equivalent gene in S.pneumoniae R6 %3D spr1282%3B identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=SPD_1256;product=peptidase%2C U32 family protein;protein_id=ABJ53746.1;transl_table=11
CP000410.2	Genbank	gene	1285275	1285442	.	+	.	ID=gene-SPD_1257;Name=SPD_1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1257
CP000410.2	Genbank	CDS	1285275	1285442	.	+	0	ID=cds-ABJ55116.1;Parent=gene-SPD_1257;Dbxref=NCBI_GP:ABJ55116.1;Name=ABJ55116.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1283;gbkey=CDS;locus_tag=SPD_1257;product=hypothetical protein;protein_id=ABJ55116.1;transl_table=11
CP000410.2	Genbank	gene	1285697	1286983	.	-	.	ID=gene-SPD_1258;Name=SPD_1258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1258
CP000410.2	Genbank	CDS	1285697	1286983	.	-	0	ID=cds-ABJ55020.1;Parent=gene-SPD_1258;Dbxref=NCBI_GP:ABJ55020.1;Name=ABJ55020.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1429%3B equivalent gene in S.pneumoniae R6 %3D spr1284%3B identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=SPD_1258;product=peptidase%2C U32 family protein;protein_id=ABJ55020.1;transl_table=11
CP000410.2	Genbank	pseudogene	1287607	1288164	.	+	.	ID=gene-SPD_1259;Name=SPD_1259;Note=Possibly an isoschizomer of XbaI. equivalent gene in S.pneumoniae R6 %3D spr1286%3B type II restriction endonuclease%2C putative%2C authentic point mutation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1259;pseudo=true
CP000410.2	Genbank	gene	1288161	1289339	.	+	.	ID=gene-SPD_1260;Name=SPD_1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1260
CP000410.2	Genbank	CDS	1288161	1289339	.	+	0	ID=cds-ABJ55276.1;Parent=gene-SPD_1260;Dbxref=NCBI_GP:ABJ55276.1;Name=ABJ55276.1;Note=Possibly an isoschizomer of XbaI. equivalent gene in S.pneumoniae TIGR4 %3D SP1431%3B equivalent gene in S.pneumoniae R6 spr1287%3B identified by match to protein family HMM PF01555;gbkey=CDS;locus_tag=SPD_1260;product=type II DNA modification methyltransferase%2C putative;protein_id=ABJ55276.1;transl_table=11
CP000410.2	Genbank	gene	1289598	1289744	.	+	.	ID=gene-SPD_1261;Name=SPD_1261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1261
CP000410.2	Genbank	CDS	1289598	1289744	.	+	0	ID=cds-ABJ54925.1;Parent=gene-SPD_1261;Dbxref=NCBI_GP:ABJ54925.1;Name=ABJ54925.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1432;gbkey=CDS;locus_tag=SPD_1261;product=hypothetical protein;protein_id=ABJ54925.1;transl_table=11
CP000410.2	Genbank	gene	1289866	1290858	.	-	.	ID=gene-SPD_1262;Name=SPD_1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1262
CP000410.2	Genbank	CDS	1289866	1290858	.	-	0	ID=cds-ABJ53615.1;Parent=gene-SPD_1262;Dbxref=NCBI_GP:ABJ53615.1;Name=ABJ53615.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1433%3B equivalent gene in S.pneumoniae R6 %3D spr1288%3B identified by match to protein family HMM PF00165;gbkey=CDS;locus_tag=SPD_1262;product=transcriptional regulator%2C AraC family protein;protein_id=ABJ53615.1;transl_table=11
CP000410.2	Genbank	gene	1291018	1292772	.	+	.	ID=gene-SPD_1263;Name=SPD_1263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1263
CP000410.2	Genbank	CDS	1291018	1292772	.	+	0	ID=cds-ABJ54705.1;Parent=gene-SPD_1263;Dbxref=NCBI_GP:ABJ54705.1;Name=ABJ54705.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1434%3B equivalent gene in S.pneumoniae R6 %3D spr1289%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1263;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ54705.1;transl_table=11
CP000410.2	Genbank	gene	1292756	1294477	.	+	.	ID=gene-SPD_1264;Name=SPD_1264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1264
CP000410.2	Genbank	CDS	1292756	1294477	.	+	0	ID=cds-ABJ54279.1;Parent=gene-SPD_1264;Dbxref=NCBI_GP:ABJ54279.1;Name=ABJ54279.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1435%3B equivalent gene in S.pneumoniae R6 %3D spr1290%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1264;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54279.1;transl_table=11
CP000410.2	Genbank	gene	1294488	1295072	.	+	.	ID=gene-SPD_1265;Name=SPD_1265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1265
CP000410.2	Genbank	CDS	1294488	1295072	.	+	0	ID=cds-ABJ55350.1;Parent=gene-SPD_1265;Dbxref=NCBI_GP:ABJ55350.1;Name=ABJ55350.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1436%3B equivalent gene in S.pneumoniae R6 %3D spr1291%3B identified by match to protein family HMM TIGR02185;gbkey=CDS;locus_tag=SPD_1265;product=membrane protein%2C putative;protein_id=ABJ55350.1;transl_table=11
CP000410.2	Genbank	gene	1295072	1295767	.	+	.	ID=gene-SPD_1266;Name=SPD_1266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1266
CP000410.2	Genbank	CDS	1295072	1295767	.	+	0	ID=cds-ABJ54427.1;Parent=gene-SPD_1266;Dbxref=NCBI_GP:ABJ54427.1;Name=ABJ54427.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1437%3B equivalent gene in S.pneumoniae R6 %3D spr1292%3B identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=SPD_1266;product=membrane protein%2C putative;protein_id=ABJ54427.1;transl_table=11
CP000410.2	Genbank	gene	1295755	1297119	.	+	.	ID=gene-SPD_1267;Name=SPD_1267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1267
CP000410.2	Genbank	CDS	1295755	1297119	.	+	0	ID=cds-ABJ54878.1;Parent=gene-SPD_1267;Dbxref=NCBI_GP:ABJ54878.1;Name=ABJ54878.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1438%3B equivalent gene in S.pneumoniae R6 %3D spr1293%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1267;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54878.1;transl_table=11
CP000410.2	Genbank	gene	1297907	1298368	.	-	.	ID=gene-SPD_1268;Name=SPD_1268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1268
CP000410.2	Genbank	CDS	1297907	1298368	.	-	0	ID=cds-ABJ53973.1;Parent=gene-SPD_1268;Dbxref=NCBI_GP:ABJ53973.1;Name=ABJ53973.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1294;gbkey=CDS;locus_tag=SPD_1268;product=hypothetical protein;protein_id=ABJ53973.1;transl_table=11
CP000410.2	Genbank	gene	1298441	1298653	.	-	.	ID=gene-SPD_1269;Name=SPD_1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1269
CP000410.2	Genbank	CDS	1298441	1298653	.	-	0	ID=cds-ABJ54996.1;Parent=gene-SPD_1269;Dbxref=NCBI_GP:ABJ54996.1;Name=ABJ54996.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1295;gbkey=CDS;locus_tag=SPD_1269;product=hypothetical protein;protein_id=ABJ54996.1;transl_table=11
CP000410.2	Genbank	gene	1298662	1298967	.	-	.	ID=gene-SPD_1270;Name=SPD_1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1270
CP000410.2	Genbank	CDS	1298662	1298967	.	-	0	ID=cds-ABJ54097.1;Parent=gene-SPD_1270;Dbxref=NCBI_GP:ABJ54097.1;Name=ABJ54097.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1296;gbkey=CDS;locus_tag=SPD_1270;product=hypothetical protein;protein_id=ABJ54097.1;transl_table=11
CP000410.2	Genbank	gene	1298954	1299148	.	-	.	ID=gene-SPD_1271;Name=SPD_1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1271
CP000410.2	Genbank	CDS	1298954	1299148	.	-	0	ID=cds-ABJ55227.1;Parent=gene-SPD_1271;Dbxref=NCBI_GP:ABJ55227.1;Name=ABJ55227.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1297;gbkey=CDS;locus_tag=SPD_1271;product=hypothetical protein;protein_id=ABJ55227.1;transl_table=11
CP000410.2	Genbank	gene	1299318	1299668	.	-	.	ID=gene-SPD_1272;Name=SPD_1272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1272
CP000410.2	Genbank	CDS	1299318	1299668	.	-	0	ID=cds-ABJ54374.1;Parent=gene-SPD_1272;Dbxref=NCBI_GP:ABJ54374.1;Name=ABJ54374.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1442%3B equivalent gene in S.pneumoniae R6 %3D spr1298%3B identified by match to protein family HMM PF05717;gbkey=CDS;locus_tag=SPD_1272;product=IS66 family element%2C Orf2;protein_id=ABJ54374.1;transl_table=11
CP000410.2	Genbank	gene	1299649	1299888	.	-	.	ID=gene-SPD_1273;Name=SPD_1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1273
CP000410.2	Genbank	CDS	1299649	1299888	.	-	0	ID=cds-ABJ55462.1;Parent=gene-SPD_1273;Dbxref=NCBI_GP:ABJ55462.1;Name=ABJ55462.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1443%3B equivalent gene in S.pneumoniae R6 %3D spr1299;gbkey=CDS;locus_tag=SPD_1273;product=IS66 family element%2C Orf1;protein_id=ABJ55462.1;transl_table=11
CP000410.2	Genbank	gene	1300138	1301700	.	-	.	ID=gene-SPD_1274;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SPD_1274
CP000410.2	Genbank	CDS	1300138	1301700	.	-	0	ID=cds-ABJ54770.1;Parent=gene-SPD_1274;Dbxref=NCBI_GP:ABJ54770.1;Name=ABJ54770.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1445%3B equivalent gene in S.pneumoniae R6 %3D spr1300%3B identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888;gbkey=CDS;gene=guaA;locus_tag=SPD_1274;product=GMP synthase%2C C-terminal domain;protein_id=ABJ54770.1;transl_table=11
CP000410.2	Genbank	gene	1301842	1302540	.	+	.	ID=gene-SPD_1275;Name=SPD_1275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1275
CP000410.2	Genbank	CDS	1301842	1302540	.	+	0	ID=cds-ABJ53764.1;Parent=gene-SPD_1275;Dbxref=NCBI_GP:ABJ53764.1;Name=ABJ53764.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1446%3B equivalent gene in S.pneumoniae R6 %3D spr1301%3B identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702;gbkey=CDS;locus_tag=SPD_1275;product=transcriptional regulator%2C GntR family protein;protein_id=ABJ53764.1;transl_table=11
CP000410.2	Genbank	gene	1302583	1303479	.	-	.	ID=gene-SPD_1276;Name=SPD_1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1276
CP000410.2	Genbank	CDS	1302583	1303479	.	-	0	ID=cds-ABJ54647.1;Parent=gene-SPD_1276;Dbxref=NCBI_GP:ABJ54647.1;Name=ABJ54647.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1447%3B equivalent gene in S.pneumoniae R6 %3D spr1302%3B identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=SPD_1276;product=membrane protein%2C putative;protein_id=ABJ54647.1;transl_table=11
CP000410.2	Genbank	gene	1303488	1304426	.	-	.	ID=gene-SPD_1277;Name=SPD_1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1277
CP000410.2	Genbank	CDS	1303488	1304426	.	-	0	ID=cds-ABJ54856.1;Parent=gene-SPD_1277;Dbxref=NCBI_GP:ABJ54856.1;Name=ABJ54856.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1448%3B equivalent gene in S.pneumoniae R6 %3D spr1303%3B identified by match to protein family HMM PF00144;gbkey=CDS;locus_tag=SPD_1277;product=hypothetical protein;protein_id=ABJ54856.1;transl_table=11
CP000410.2	Genbank	gene	1304423	1305148	.	-	.	ID=gene-SPD_1278;Name=cppA;gbkey=Gene;gene=cppA;gene_biotype=protein_coding;locus_tag=SPD_1278
CP000410.2	Genbank	CDS	1304423	1305148	.	-	0	ID=cds-ABJ54055.1;Parent=gene-SPD_1278;Dbxref=NCBI_GP:ABJ54055.1;Name=ABJ54055.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1449%3B equivalent gene in S.pneumoniae R6 %3D spr1304;gbkey=CDS;gene=cppA;locus_tag=SPD_1278;product=C3-degrading proteinase;protein_id=ABJ54055.1;transl_table=11
CP000410.2	Genbank	gene	1305232	1305867	.	-	.	ID=gene-SPD_1279;Name=SPD_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1279
CP000410.2	Genbank	CDS	1305232	1305867	.	-	0	ID=cds-ABJ53620.1;Parent=gene-SPD_1279;Dbxref=NCBI_GP:ABJ53620.1;Name=ABJ53620.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1450%3B equivalent gene in S.pneumoniae R6 %3D spr1305%3B identified by match to protein family HMM PF00657;gbkey=CDS;locus_tag=SPD_1279;product=GDSL-like lipase/acylhydrolase%2C putative;protein_id=ABJ53620.1;transl_table=11
CP000410.2	Genbank	gene	1305869	1306696	.	-	.	ID=gene-SPD_1280;Name=SPD_1280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1280
CP000410.2	Genbank	CDS	1305869	1306696	.	-	0	ID=cds-ABJ54991.1;Parent=gene-SPD_1280;Dbxref=NCBI_GP:ABJ54991.1;Name=ABJ54991.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1451%3B equivalent gene in S.pneumoniae R6 %3D spr1306%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_1280;product=Cof family protein;protein_id=ABJ54991.1;transl_table=11
CP000410.2	Genbank	gene	1306718	1307053	.	-	.	ID=gene-SPD_1281;Name=SPD_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1281
CP000410.2	Genbank	CDS	1306718	1307053	.	-	0	ID=cds-ABJ53885.1;Parent=gene-SPD_1281;Dbxref=NCBI_GP:ABJ53885.1;Name=ABJ53885.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1452%3B equivalent gene in S.pneumoniae R6 %3D spr1307;gbkey=CDS;locus_tag=SPD_1281;product=hypothetical protein;protein_id=ABJ53885.1;transl_table=11
CP000410.2	Genbank	gene	1307054	1307566	.	-	.	ID=gene-SPD_1282;Name=SPD_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1282
CP000410.2	Genbank	CDS	1307054	1307566	.	-	0	ID=cds-ABJ54207.1;Parent=gene-SPD_1282;Dbxref=NCBI_GP:ABJ54207.1;Name=ABJ54207.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1453%3B equivalent gene in S.pneumoniae R6 %3D spr1308;gbkey=CDS;locus_tag=SPD_1282;product=hypothetical protein;protein_id=ABJ54207.1;transl_table=11
CP000410.2	Genbank	gene	1307660	1307782	.	-	.	ID=gene-SPD_1283;Name=SPD_1283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1283
CP000410.2	Genbank	CDS	1307660	1307782	.	-	0	ID=cds-ABJ54661.1;Parent=gene-SPD_1283;Dbxref=NCBI_GP:ABJ54661.1;Name=ABJ54661.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1454;gbkey=CDS;locus_tag=SPD_1283;product=hypothetical protein;protein_id=ABJ54661.1;transl_table=11
CP000410.2	Genbank	gene	1307858	1307971	.	+	.	ID=gene-SPD_1284;Name=SPD_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1284
CP000410.2	Genbank	CDS	1307858	1307971	.	+	0	ID=cds-ABJ53807.1;Parent=gene-SPD_1284;Dbxref=NCBI_GP:ABJ53807.1;Name=ABJ53807.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1309%3B identified by similarity to GB:AAL001131;gbkey=CDS;locus_tag=SPD_1284;product=hypothetical protein;protein_id=ABJ53807.1;transl_table=11
CP000410.2	Genbank	gene	1308295	1308906	.	+	.	ID=gene-SPD_1285;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=SPD_1285
CP000410.2	Genbank	CDS	1308295	1308906	.	+	0	ID=cds-ABJ54406.1;Parent=gene-SPD_1285;Dbxref=NCBI_GP:ABJ54406.1;Name=ABJ54406.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1456%3B equivalent gene in S.pneumoniae R6 %3D spr1310%3B identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079;gbkey=CDS;gene=def;locus_tag=SPD_1285;product=peptide deformylase;protein_id=ABJ54406.1;transl_table=11
CP000410.2	Genbank	gene	1308951	1309679	.	+	.	ID=gene-SPD_1286;Name=SPD_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1286
CP000410.2	Genbank	CDS	1308951	1309679	.	+	0	ID=cds-ABJ55111.1;Parent=gene-SPD_1286;Dbxref=NCBI_GP:ABJ55111.1;Name=ABJ55111.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1457%3B equivalent gene in S.pneumoniae R6 %3D spr1311%3B identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186;gbkey=CDS;locus_tag=SPD_1286;product=TrmH family RNA methyltransferase group 3;protein_id=ABJ55111.1;transl_table=11
CP000410.2	Genbank	gene	1309718	1310629	.	-	.	ID=gene-SPD_1287;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=SPD_1287
CP000410.2	Genbank	CDS	1309718	1310629	.	-	0	ID=cds-ABJ55208.1;Parent=gene-SPD_1287;Dbxref=NCBI_GP:ABJ55208.1;Name=ABJ55208.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1458%3B equivalent gene in S.pneumoniae R6 %3D spr1312%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR01292;gbkey=CDS;gene=trxB;locus_tag=SPD_1287;product=thioredoxin-disulfide reductase;protein_id=ABJ55208.1;transl_table=11
CP000410.2	Genbank	gene	1310695	1310919	.	-	.	ID=gene-SPD_1288;Name=SPD_1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1288
CP000410.2	Genbank	CDS	1310695	1310919	.	-	0	ID=cds-ABJ54428.1;Parent=gene-SPD_1288;Dbxref=NCBI_GP:ABJ54428.1;Name=ABJ54428.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1459%3B equivalent gene in S.pneumoniae R6 %3D spr1313;gbkey=CDS;locus_tag=SPD_1288;product=hypothetical protein;protein_id=ABJ54428.1;transl_table=11
CP000410.2	Genbank	gene	1310997	1311740	.	-	.	ID=gene-SPD_1289;Name=SPD_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1289
CP000410.2	Genbank	CDS	1310997	1311740	.	-	0	ID=cds-ABJ55005.1;Parent=gene-SPD_1289;Dbxref=NCBI_GP:ABJ55005.1;Name=ABJ55005.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1460%3B equivalent gene in S.pneumoniae R6 %3D spr1314%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1289;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ55005.1;transl_table=11
CP000410.2	Genbank	gene	1311740	1312540	.	-	.	ID=gene-SPD_1290;Name=SPD_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1290
CP000410.2	Genbank	CDS	1311740	1312540	.	-	0	ID=cds-ABJ54243.1;Parent=gene-SPD_1290;Dbxref=NCBI_GP:ABJ54243.1;Name=ABJ54243.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1461%3B equivalent gene in S.pneumoniae R6 %3D spr1315%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_1290;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ54243.1;transl_table=11
CP000410.2	Genbank	gene	1312698	1313054	.	-	.	ID=gene-SPD_1291;Name=SPD_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1291
CP000410.2	Genbank	CDS	1312698	1313054	.	-	0	ID=cds-ABJ53882.1;Parent=gene-SPD_1291;Dbxref=NCBI_GP:ABJ53882.1;Name=ABJ53882.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1462%3B equivalent gene in S.pneumoniae R6 %3D spr1316%3B identified by match to protein family HMM PF03960%3B match to protein family HMM TIGR01617;gbkey=CDS;locus_tag=SPD_1291;product=ArsC family protein;protein_id=ABJ53882.1;transl_table=11
CP000410.2	Genbank	gene	1313048	1313578	.	-	.	ID=gene-SPD_1292;Name=ogt;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=SPD_1292
CP000410.2	Genbank	CDS	1313048	1313578	.	-	0	ID=cds-ABJ55006.1;Parent=gene-SPD_1292;Dbxref=NCBI_GP:ABJ55006.1;Name=ABJ55006.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1463%3B equivalent gene in S.pneumoniae R6 %3D spr1317%3B identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;gene=ogt;locus_tag=SPD_1292;product=methylated-DNA--protein-cysteine S-methyltransferase;protein_id=ABJ55006.1;transl_table=11
CP000410.2	Genbank	gene	1313578	1314072	.	-	.	ID=gene-SPD_1293;Name=SPD_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1293
CP000410.2	Genbank	CDS	1313578	1314072	.	-	0	ID=cds-ABJ53641.1;Parent=gene-SPD_1293;Dbxref=NCBI_GP:ABJ53641.1;Name=ABJ53641.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1464%3B equivalent gene in S.pneumoniae R6 %3D spr1318%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1293;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ53641.1;transl_table=11
CP000410.2	Genbank	gene	1314207	1314653	.	+	.	ID=gene-SPD_1294;Name=SPD_1294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1294
CP000410.2	Genbank	CDS	1314207	1314653	.	+	0	ID=cds-ABJ54724.1;Parent=gene-SPD_1294;Dbxref=NCBI_GP:ABJ54724.1;Name=ABJ54724.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1465%3B equivalent gene in S.pneumoniae R6 %3D spr1319;gbkey=CDS;locus_tag=SPD_1294;product=hypothetical protein;protein_id=ABJ54724.1;transl_table=11
CP000410.2	Genbank	gene	1314650	1315297	.	+	.	ID=gene-SPD_1295;Name=SPD_1295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1295
CP000410.2	Genbank	CDS	1314650	1315297	.	+	0	ID=cds-ABJ54059.1;Parent=gene-SPD_1295;Dbxref=NCBI_GP:ABJ54059.1;Name=ABJ54059.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1466%3B equivalent gene in S.pneumoniae R6 %3D spr1320%3B identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065;gbkey=CDS;locus_tag=SPD_1295;product=hemolysin;protein_id=ABJ54059.1;transl_table=11
CP000410.2	Genbank	gene	1315318	1315899	.	-	.	ID=gene-SPD_1296;Name=SPD_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1296
CP000410.2	Genbank	CDS	1315318	1315899	.	-	0	ID=cds-ABJ55188.1;Parent=gene-SPD_1296;Dbxref=NCBI_GP:ABJ55188.1;Name=ABJ55188.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1467%3B equivalent gene in S.pneumoniae R6 %3D spr1321%3B identified by match to protein family HMM PF01174%3B match to protein family HMM PF07685;gbkey=CDS;locus_tag=SPD_1296;product=glutamine amidotransferase%2C SNO family protein%2C putative;protein_id=ABJ55188.1;transl_table=11
CP000410.2	Genbank	gene	1315900	1316775	.	-	.	ID=gene-SPD_1297;Name=SPD_1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1297
CP000410.2	Genbank	CDS	1315900	1316775	.	-	0	ID=cds-ABJ54048.1;Parent=gene-SPD_1297;Dbxref=NCBI_GP:ABJ54048.1;Name=ABJ54048.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1468%3B equivalent gene in S.pneumoniae R6 %3D spr1322%3B identified by match to protein family HMM PF01680%3B match to protein family HMM TIGR00343;gbkey=CDS;locus_tag=SPD_1297;product=pyridoxine biosynthesis protein;protein_id=ABJ54048.1;transl_table=11
CP000410.2	Genbank	gene	1316927	1318306	.	-	.	ID=gene-SPD_1298;Name=nox;gbkey=Gene;gene=nox;gene_biotype=protein_coding;locus_tag=SPD_1298
CP000410.2	Genbank	CDS	1316927	1318306	.	-	0	ID=cds-ABJ54965.1;Parent=gene-SPD_1298;Dbxref=NCBI_GP:ABJ54965.1;Name=ABJ54965.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1469%3B equivalent gene in S.pneumoniae R6 %3D spr1323%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;gene=nox;locus_tag=SPD_1298;product=NADH oxidase;protein_id=ABJ54965.1;transl_table=11
CP000410.2	Genbank	gene	1318448	1318603	.	+	.	ID=gene-SPD_1299;Name=SPD_1299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1299
CP000410.2	Genbank	CDS	1318448	1318603	.	+	0	ID=cds-ABJ53697.1;Parent=gene-SPD_1299;Dbxref=NCBI_GP:ABJ53697.1;Name=ABJ53697.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1299;product=hypothetical protein;protein_id=ABJ53697.1;transl_table=11
CP000410.2	Genbank	gene	1318600	1319523	.	+	.	ID=gene-SPD_1300;Name=SPD_1300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1300
CP000410.2	Genbank	CDS	1318600	1319523	.	+	0	ID=cds-ABJ54709.1;Parent=gene-SPD_1300;Dbxref=NCBI_GP:ABJ54709.1;Name=ABJ54709.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1470%3B equivalent gene in S.pneumoniae R6 %3D spr1324%3B identified by match to protein family HMM PF02424;gbkey=CDS;locus_tag=SPD_1300;product=thiamine biosynthesis protein ApbE%2C putative;protein_id=ABJ54709.1;transl_table=11
CP000410.2	Genbank	gene	1319583	1320188	.	+	.	ID=gene-SPD_1301;Name=SPD_1301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1301
CP000410.2	Genbank	CDS	1319583	1320188	.	+	0	ID=cds-ABJ54410.1;Parent=gene-SPD_1301;Dbxref=NCBI_GP:ABJ54410.1;Name=ABJ54410.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1471%3B equivalent gene in S.pneumoniae R6 %3D spr1325%3B identified by match to protein family HMM PF03358;gbkey=CDS;locus_tag=SPD_1301;product=NADPH-dependent FMN reductase;protein_id=ABJ54410.1;transl_table=11
CP000410.2	Genbank	gene	1320206	1321450	.	+	.	ID=gene-SPD_1302;Name=SPD_1302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1302
CP000410.2	Genbank	CDS	1320206	1321450	.	+	0	ID=cds-ABJ55410.1;Parent=gene-SPD_1302;Dbxref=NCBI_GP:ABJ55410.1;Name=ABJ55410.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1472%3B equivalent gene in S.pneumoniae R6 %3D spr1326%3B identified by match to protein family HMM PF03358;gbkey=CDS;locus_tag=SPD_1302;product=oxidoreductase%2C putative;protein_id=ABJ55410.1;transl_table=11
CP000410.2	Genbank	gene	1321567	1321824	.	-	.	ID=gene-SPD_1303;Name=SPD_1303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1303
CP000410.2	Genbank	CDS	1321567	1321824	.	-	0	ID=cds-ABJ55404.1;Parent=gene-SPD_1303;Dbxref=NCBI_GP:ABJ55404.1;Name=ABJ55404.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1473%3B equivalent gene in S.pneumoniae R6 %3D spr1327%3B identified by match to protein family HMM PF05979;gbkey=CDS;locus_tag=SPD_1303;product=hypothetical protein;protein_id=ABJ55404.1;transl_table=11
CP000410.2	Genbank	gene	1321866	1323902	.	-	.	ID=gene-SPD_1304;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SPD_1304
CP000410.2	Genbank	CDS	1321866	1323902	.	-	0	ID=cds-ABJ54528.1;Parent=gene-SPD_1304;Dbxref=NCBI_GP:ABJ54528.1;Name=ABJ54528.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1474%3B equivalent gene in S.pneumoniae R6 %3D spr1328%3B identified by match to protein family HMM PF02092%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00211;gbkey=CDS;gene=glyS;locus_tag=SPD_1304;product=glycyl-tRNA synthetase%2C beta subunit;protein_id=ABJ54528.1;transl_table=11
CP000410.2	Genbank	gene	1324162	1325079	.	-	.	ID=gene-SPD_1305;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=SPD_1305
CP000410.2	Genbank	CDS	1324162	1325079	.	-	0	ID=cds-ABJ54933.1;Parent=gene-SPD_1305;Dbxref=NCBI_GP:ABJ54933.1;Name=ABJ54933.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1475%3B equivalent gene in S.pneumoniae R6 %3D spr1329%3B identified by match to protein family HMM PF02091%3B match to protein family HMM TIGR00388;gbkey=CDS;gene=glyQ;locus_tag=SPD_1305;product=glycyl-tRNA synthetase%2C alpha subunit;protein_id=ABJ54933.1;transl_table=11
CP000410.2	Genbank	gene	1325273	1325662	.	-	.	ID=gene-SPD_1306;Name=SPD_1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1306
CP000410.2	Genbank	CDS	1325273	1325662	.	-	0	ID=cds-ABJ54390.1;Parent=gene-SPD_1306;Dbxref=NCBI_GP:ABJ54390.1;Name=ABJ54390.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1476%3B equivalent gene in S.pneumoniae R6 %3D spr1330;gbkey=CDS;locus_tag=SPD_1306;product=hypothetical protein;protein_id=ABJ54390.1;transl_table=11
CP000410.2	Genbank	gene	1325644	1326033	.	-	.	ID=gene-SPD_1307;Name=SPD_1307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1307
CP000410.2	Genbank	CDS	1325644	1326033	.	-	0	ID=cds-ABJ54286.1;Parent=gene-SPD_1307;Dbxref=NCBI_GP:ABJ54286.1;Name=ABJ54286.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1477%3B equivalent gene in S.pneumoniae R6 %3D spr1331;gbkey=CDS;locus_tag=SPD_1307;product=hypothetical protein;protein_id=ABJ54286.1;transl_table=11
CP000410.2	Genbank	gene	1326306	1327148	.	-	.	ID=gene-SPD_1308;Name=SPD_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1308
CP000410.2	Genbank	CDS	1326306	1327148	.	-	0	ID=cds-ABJ54608.1;Parent=gene-SPD_1308;Dbxref=NCBI_GP:ABJ54608.1;Name=ABJ54608.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1478%3B equivalent gene in S.pneumoniae R6 %3D spr1332%3B identified by match to protein family HMM PF00248;gbkey=CDS;locus_tag=SPD_1308;product=oxidoreductase%2C aldo/keto reductase family protein;protein_id=ABJ54608.1;transl_table=11
CP000410.2	Genbank	gene	1327262	1328704	.	-	.	ID=gene-SPD_1309;Name=pgdA;gbkey=Gene;gene=pgdA;gene_biotype=protein_coding;locus_tag=SPD_1309
CP000410.2	Genbank	CDS	1327262	1328704	.	-	0	ID=cds-ABJ54084.1;Parent=gene-SPD_1309;Dbxref=NCBI_GP:ABJ54084.1;Name=ABJ54084.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1479%3B equivalent gene in S.pneumoniae R6 %3D spr1333%3B identified by match to protein family HMM PF01522;gbkey=CDS;gene=pgdA;locus_tag=SPD_1309;product=peptidoglycan GlcNAc deacetylase;protein_id=ABJ54084.1;transl_table=11
CP000410.2	Genbank	gene	1328888	1329133	.	-	.	ID=gene-SPD_1310;Name=SPD_1310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1310
CP000410.2	Genbank	CDS	1328888	1329133	.	-	0	ID=cds-ABJ55396.1;Parent=gene-SPD_1310;Dbxref=NCBI_GP:ABJ55396.1;Name=ABJ55396.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1480%3B equivalent gene in S.pneumoniae R6 %3D spr1334;gbkey=CDS;locus_tag=SPD_1310;product=hypothetical protein;protein_id=ABJ55396.1;transl_table=11
CP000410.2	Genbank	gene	1329480	1330457	.	+	.	ID=gene-SPD_1311;Name=SPD_1311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1311
CP000410.2	Genbank	CDS	1329480	1330457	.	+	0	ID=cds-ABJ54618.1;Parent=gene-SPD_1311;Dbxref=NCBI_GP:ABJ54618.1;Name=ABJ54618.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1482%3B equivalent gene in S.pneumoniae R6 %3D spr1335%3B identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408;gbkey=CDS;locus_tag=SPD_1311;product=oxidoreductase%2C Gfo/Idh/MocA family protein;protein_id=ABJ54618.1;transl_table=11
CP000410.2	Genbank	gene	1330454	1331536	.	+	.	ID=gene-SPD_1312;Name=SPD_1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1312
CP000410.2	Genbank	CDS	1330454	1331536	.	+	0	ID=cds-ABJ55127.1;Parent=gene-SPD_1312;Dbxref=NCBI_GP:ABJ55127.1;Name=ABJ55127.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1483%3B equivalent gene in S.pneumoniae R6 %3D spr1336%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=SPD_1312;product=ATP-dependent RNA helicase%2C DEAD/DEAH box family protein;protein_id=ABJ55127.1;transl_table=11
CP000410.2	Genbank	pseudogene	1331695	1332675	.	-	.	ID=gene-SPD_1313;Name=SPD_1313;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr1339%3B IS3-Spn1%2C transposase%2C authentic truncation%3B identified by match to protein family HMM PF00665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1313;pseudo=true
CP000410.2	Genbank	pseudogene	1332651	1333019	.	-	.	ID=gene-SPD_1314;Name=SPD_1314;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr0753%3B IS3-Spn1%2C transposase%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1314;pseudo=true
CP000410.2	Genbank	pseudogene	1333019	1333457	.	-	.	ID=gene-SPD_1315;Name=SPD_1315;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1596%3B equivalent gene in S.pneumoniae R6 %3D spr1448%3B IS3-Spn1%2C hypothetical protein%2C interruption;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1315;pseudo=true
CP000410.2	Genbank	gene	1333511	1333849	.	-	.	ID=gene-SPD_1316;Name=SPD_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1316
CP000410.2	Genbank	CDS	1333511	1333849	.	-	0	ID=cds-ABJ54491.1;Parent=gene-SPD_1316;Dbxref=NCBI_GP:ABJ54491.1;Name=ABJ54491.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1487%3B equivalent gene in S.pneumoniae R6 %3D spr1342;gbkey=CDS;locus_tag=SPD_1316;product=hypothetical protein;protein_id=ABJ54491.1;transl_table=11
CP000410.2	Genbank	gene	1333972	1334112	.	-	.	ID=gene-SPD_1317;Name=SPD_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1317
CP000410.2	Genbank	CDS	1333972	1334112	.	-	0	ID=cds-ABJ55080.1;Parent=gene-SPD_1317;Dbxref=NCBI_GP:ABJ55080.1;Name=ABJ55080.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1488;gbkey=CDS;locus_tag=SPD_1317;product=hypothetical protein;protein_id=ABJ55080.1;transl_table=11
CP000410.2	Genbank	gene	1334496	1335692	.	-	.	ID=gene-SPD_1318;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=SPD_1318
CP000410.2	Genbank	CDS	1334496	1335692	.	-	0	ID=cds-ABJ53652.1;Parent=gene-SPD_1318;Dbxref=NCBI_GP:ABJ53652.1;Name=ABJ53652.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1489%3B equivalent gene in S.pneumoniae R6 %3D spr1343%3B identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;locus_tag=SPD_1318;product=translation elongation factor Tu;protein_id=ABJ53652.1;transl_table=11
CP000410.2	Genbank	gene	1336035	1336157	.	-	.	ID=gene-SPD_1319;Name=SPD_1319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1319
CP000410.2	Genbank	CDS	1336035	1336157	.	-	0	ID=cds-ABJ55377.1;Parent=gene-SPD_1319;Dbxref=NCBI_GP:ABJ55377.1;Name=ABJ55377.1;gbkey=CDS;locus_tag=SPD_1319;product=hypothetical protein;protein_id=ABJ55377.1;transl_table=11
CP000410.2	Genbank	gene	1336614	1337483	.	-	.	ID=gene-SPD_1320;Name=SPD_1320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1320
CP000410.2	Genbank	CDS	1336614	1337483	.	-	0	ID=cds-ABJ53895.1;Parent=gene-SPD_1320;Dbxref=NCBI_GP:ABJ53895.1;Name=ABJ53895.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1491%3B equivalent gene in S.pneumoniae R6 %3D spr1344%3B identified by match to protein family HMM PF00230;gbkey=CDS;locus_tag=SPD_1320;product=glycerol uptake facilitator protein%2C putative;protein_id=ABJ53895.1;transl_table=11
CP000410.2	Genbank	gene	1337707	1338315	.	-	.	ID=gene-SPD_1321;Name=SPD_1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1321
CP000410.2	Genbank	CDS	1337707	1338315	.	-	0	ID=cds-ABJ54650.1;Parent=gene-SPD_1321;Dbxref=NCBI_GP:ABJ54650.1;Name=ABJ54650.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1492%3B equivalent gene in S.pneumoniae R6 %3D spr1345%3B identified by match to protein family HMM PF00746%3B match to protein family HMM PF06458%3B match to protein family HMM TIGR01167;gbkey=CDS;locus_tag=SPD_1321;product=cell wall surface anchor family protein;protein_id=ABJ54650.1;transl_table=11
CP000410.2	Genbank	gene	1338273	1339379	.	-	.	ID=gene-SPD_1322;Name=SPD_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1322
CP000410.2	Genbank	CDS	1338273	1339379	.	-	0	ID=cds-ABJ53673.1;Parent=gene-SPD_1322;Dbxref=NCBI_GP:ABJ53673.1;Name=ABJ53673.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1493%3B equivalent gene in S.pneumoniae R6 %3D spr1346;gbkey=CDS;locus_tag=SPD_1322;product=hypothetical protein;protein_id=ABJ53673.1;transl_table=11
CP000410.2	Genbank	gene	1339490	1339744	.	-	.	ID=gene-SPD_1323;Name=SPD_1323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1323
CP000410.2	Genbank	CDS	1339490	1339744	.	-	0	ID=cds-ABJ55018.1;Parent=gene-SPD_1323;Dbxref=NCBI_GP:ABJ55018.1;Name=ABJ55018.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1494%3B equivalent gene in S.pneumoniae R6 %3D spr1347;gbkey=CDS;locus_tag=SPD_1323;product=hypothetical protein;protein_id=ABJ55018.1;transl_table=11
CP000410.2	Genbank	gene	1340102	1340401	.	-	.	ID=gene-SPD_1324;Name=SPD_1324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1324
CP000410.2	Genbank	CDS	1340102	1340401	.	-	0	ID=cds-ABJ53959.1;Parent=gene-SPD_1324;Dbxref=NCBI_GP:ABJ53959.1;Name=ABJ53959.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1496%3B equivalent gene in S.pneumoniae R6 %3D spr1349;gbkey=CDS;locus_tag=SPD_1324;product=IS630-Spn1%2C transposase Orf2;protein_id=ABJ53959.1;transl_table=11
CP000410.2	Genbank	pseudogene	1340621	1340946	.	-	.	ID=gene-SPD_1325;Name=SPD_1325;Note=equivalent gene in S.pneumoniae R6 %3D spr1350%3B IS630-Spn1%2C transposase Orf1%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1325;pseudo=true
CP000410.2	Genbank	gene	1341180	1342898	.	+	.	ID=gene-SPD_1326;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=SPD_1326
CP000410.2	Genbank	CDS	1341180	1342898	.	+	0	ID=cds-ABJ53900.1;Parent=gene-SPD_1326;Dbxref=NCBI_GP:ABJ53900.1;Name=ABJ53900.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1498%3B equivalent gene in S.pneumoniae R6 %3D spr1351%3B identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880;gbkey=CDS;gene=pgm;locus_tag=SPD_1326;product=phosphoglucomutase/phosphomannomutase family protein;protein_id=ABJ53900.1;transl_table=11
CP000410.2	Genbank	gene	1343009	1343356	.	+	.	ID=gene-SPD_1327;Name=bta;gbkey=Gene;gene=bta;gene_biotype=protein_coding;locus_tag=SPD_1327
CP000410.2	Genbank	CDS	1343009	1343356	.	+	0	ID=cds-ABJ54953.1;Parent=gene-SPD_1327;Dbxref=NCBI_GP:ABJ54953.1;Name=ABJ54953.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1499%3B equivalent gene in S.pneumoniae R6 %3D spr1352%3B identified by match to protein family HMM TIGR01295;gbkey=CDS;gene=bta;locus_tag=SPD_1327;product=bacterocin transport accessory protein;protein_id=ABJ54953.1;transl_table=11
CP000410.2	Genbank	gene	1343635	1344471	.	-	.	ID=gene-SPD_1328;Name=aatB;gbkey=Gene;gene=aatB;gene_biotype=protein_coding;locus_tag=SPD_1328
CP000410.2	Genbank	CDS	1343635	1344471	.	-	0	ID=cds-ABJ53828.1;Parent=gene-SPD_1328;Dbxref=NCBI_GP:ABJ53828.1;Name=ABJ53828.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1500%3B equivalent gene in S.pneumoniae R6 %3D spr1353%3B identified by match to protein family HMM PF00497;gbkey=CDS;gene=aatB;locus_tag=SPD_1328;product=amino acid ABC transporter%2C amino acid-binding protein;protein_id=ABJ53828.1;transl_table=11
CP000410.2	Genbank	gene	1344484	1345113	.	-	.	ID=gene-SPD_1329;Name=SPD_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1329
CP000410.2	Genbank	CDS	1344484	1345113	.	-	0	ID=cds-ABJ54457.1;Parent=gene-SPD_1329;Dbxref=NCBI_GP:ABJ54457.1;Name=ABJ54457.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1501%3B equivalent gene in S.pneumoniae R6 %3D spr1354%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1329;product=amino acid ABC transporter%2C ATP-binding protein;protein_id=ABJ54457.1;transl_table=11
CP000410.2	Genbank	gene	1345123	1345764	.	-	.	ID=gene-SPD_1330;Name=SPD_1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1330
CP000410.2	Genbank	CDS	1345123	1345764	.	-	0	ID=cds-ABJ54825.1;Parent=gene-SPD_1330;Dbxref=NCBI_GP:ABJ54825.1;Name=ABJ54825.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1502%3B equivalent gene in S.pneumoniae R6 %3D spr1355%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=SPD_1330;product=amino acid ABC transporter%2C permease protein;protein_id=ABJ54825.1;transl_table=11
CP000410.2	Genbank	gene	1345910	1347139	.	-	.	ID=gene-SPD_1331;Name=SPD_1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1331
CP000410.2	Genbank	CDS	1345910	1347139	.	-	0	ID=cds-ABJ54245.1;Parent=gene-SPD_1331;Dbxref=NCBI_GP:ABJ54245.1;Name=ABJ54245.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1504%3B equivalent gene in S.pneumoniae R6 %3D spr1356%3B identified by match to protein family HMM PF00515%3B match to protein family HMM PF07719;gbkey=CDS;locus_tag=SPD_1331;product=TPR domain protein;protein_id=ABJ54245.1;transl_table=11
CP000410.2	Genbank	gene	1347129	1348295	.	-	.	ID=gene-SPD_1332;Name=SPD_1332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1332
CP000410.2	Genbank	CDS	1347129	1348295	.	-	0	ID=cds-ABJ55310.1;Parent=gene-SPD_1332;Dbxref=NCBI_GP:ABJ55310.1;Name=ABJ55310.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1505%3B equivalent gene in S.pneumoniae R6 %3D spr1357%3B identified by match to protein family HMM PF01594;gbkey=CDS;locus_tag=SPD_1332;product=membrane protein%2C putative;protein_id=ABJ55310.1;transl_table=11
CP000410.2	Genbank	gene	1348439	1349452	.	+	.	ID=gene-SPD_1333;Name=SPD_1333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1333
CP000410.2	Genbank	CDS	1348439	1349452	.	+	0	ID=cds-ABJ53729.1;Parent=gene-SPD_1333;Dbxref=NCBI_GP:ABJ53729.1;Name=ABJ53729.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1506%3B equivalent gene in S.pneumoniae R6 %3D spr1358;gbkey=CDS;locus_tag=SPD_1333;product=hypothetical protein;protein_id=ABJ53729.1;transl_table=11
CP000410.2	Genbank	gene	1349497	1349916	.	-	.	ID=gene-SPD_1334;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=SPD_1334
CP000410.2	Genbank	CDS	1349497	1349916	.	-	0	ID=cds-ABJ54693.1;Parent=gene-SPD_1334;Dbxref=NCBI_GP:ABJ54693.1;Name=ABJ54693.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1507%3B equivalent gene in S.pneumoniae R6 %3D spr1359%3B identified by match to protein family HMM PF00401%3B match to protein family HMM PF02823%3B match to protein family HMM TIGR01216;gbkey=CDS;gene=atpC;locus_tag=SPD_1334;product=ATP synthase F1%2C epsilon subunit;protein_id=ABJ54693.1;transl_table=11
CP000410.2	Genbank	gene	1349927	1351333	.	-	.	ID=gene-SPD_1335;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=SPD_1335
CP000410.2	Genbank	CDS	1349927	1351333	.	-	0	ID=cds-ABJ54840.1;Parent=gene-SPD_1335;Dbxref=NCBI_GP:ABJ54840.1;Name=ABJ54840.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1508%3B equivalent gene in S.pneumoniae R6 %3D spr1360%3B identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039;gbkey=CDS;gene=atpD;locus_tag=SPD_1335;product=ATP synthase F1%2C beta subunit;protein_id=ABJ54840.1;transl_table=11
CP000410.2	Genbank	gene	1351419	1352297	.	-	.	ID=gene-SPD_1336;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=SPD_1336
CP000410.2	Genbank	CDS	1351419	1352297	.	-	0	ID=cds-ABJ54201.1;Parent=gene-SPD_1336;Dbxref=NCBI_GP:ABJ54201.1;Name=ABJ54201.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1509%3B equivalent gene in S.pneumoniae R6 %3D spr1361%3B identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146;gbkey=CDS;gene=atpG;locus_tag=SPD_1336;product=ATP synthase F1%2C gamma subunit;protein_id=ABJ54201.1;transl_table=11
CP000410.2	Genbank	gene	1352313	1353818	.	-	.	ID=gene-SPD_1337;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=SPD_1337
CP000410.2	Genbank	CDS	1352313	1353818	.	-	0	ID=cds-ABJ55505.1;Parent=gene-SPD_1337;Dbxref=NCBI_GP:ABJ55505.1;Name=ABJ55505.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1510%3B equivalent gene in S.pneumoniae R6 %3D spr1362%3B identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR00962;gbkey=CDS;gene=atpA;locus_tag=SPD_1337;product=ATP synthase F1%2C alpha subunit;protein_id=ABJ55505.1;transl_table=11
CP000410.2	Genbank	gene	1353833	1354369	.	-	.	ID=gene-SPD_1338;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=SPD_1338
CP000410.2	Genbank	CDS	1353833	1354369	.	-	0	ID=cds-ABJ54439.1;Parent=gene-SPD_1338;Dbxref=NCBI_GP:ABJ54439.1;Name=ABJ54439.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1511%3B equivalent gene in S.pneumoniae R6 %3D spr1363%3B identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145;gbkey=CDS;gene=atpH;locus_tag=SPD_1338;product=ATP synthase F1%2C delta subunit;protein_id=ABJ54439.1;transl_table=11
CP000410.2	Genbank	gene	1354369	1354863	.	-	.	ID=gene-SPD_1339;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=SPD_1339
CP000410.2	Genbank	CDS	1354369	1354863	.	-	0	ID=cds-ABJ53806.1;Parent=gene-SPD_1339;Dbxref=NCBI_GP:ABJ53806.1;Name=ABJ53806.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1512%3B equivalent gene in S.pneumoniae R6 %3D spr1364%3B identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144;gbkey=CDS;gene=atpF;locus_tag=SPD_1339;product=ATP synthase F0%2C B subunit;protein_id=ABJ53806.1;transl_table=11
CP000410.2	Genbank	gene	1354877	1355593	.	-	.	ID=gene-SPD_1340;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=SPD_1340
CP000410.2	Genbank	CDS	1354877	1355593	.	-	0	ID=cds-ABJ54678.1;Parent=gene-SPD_1340;Dbxref=NCBI_GP:ABJ54678.1;Name=ABJ54678.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1513%3B equivalent gene in S.pneumoniae R6 %3D spr1365%3B identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131;gbkey=CDS;gene=atpB;locus_tag=SPD_1340;product=ATP synthase F0%2C A subunit;protein_id=ABJ54678.1;transl_table=11
CP000410.2	Genbank	gene	1355628	1355828	.	-	.	ID=gene-SPD_1341;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=SPD_1341
CP000410.2	Genbank	CDS	1355628	1355828	.	-	0	ID=cds-ABJ53659.1;Parent=gene-SPD_1341;Dbxref=NCBI_GP:ABJ53659.1;Name=ABJ53659.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1514%3B equivalent gene in S.pneumoniae R6 %3D spr1366%3B identified by match to protein family HMM PF00137;gbkey=CDS;gene=atpE;locus_tag=SPD_1341;product=ATP synthase F0%2C C subunit;protein_id=ABJ53659.1;transl_table=11
CP000410.2	Genbank	gene	1355903	1356910	.	-	.	ID=gene-SPD_1342;Name=SPD_1342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1342
CP000410.2	Genbank	CDS	1355903	1356910	.	-	0	ID=cds-ABJ55044.1;Parent=gene-SPD_1342;Dbxref=NCBI_GP:ABJ55044.1;Name=ABJ55044.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0915%3B equivalent gene in S.pneumoniae R6 %3D spr1367%3B identified by match to protein family HMM PF00665;gbkey=CDS;locus_tag=SPD_1342;product=IS1239%2C transposase%2C putative;protein_id=ABJ55044.1;transl_table=11
CP000410.2	Genbank	gene	1357355	1357783	.	-	.	ID=gene-SPD_1343;Name=SPD_1343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1343
CP000410.2	Genbank	CDS	1357355	1357783	.	-	0	ID=cds-ABJ53618.1;Parent=gene-SPD_1343;Dbxref=NCBI_GP:ABJ53618.1;Name=ABJ53618.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1516%3B equivalent gene in S.pneumoniae R6 %3D spr1368%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1343;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ53618.1;transl_table=11
CP000410.2	Genbank	gene	1357871	1358278	.	-	.	ID=gene-SPD_1344;Name=SPD_1344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1344
CP000410.2	Genbank	CDS	1357871	1358278	.	-	0	ID=cds-ABJ55206.1;Parent=gene-SPD_1344;Dbxref=NCBI_GP:ABJ55206.1;Name=ABJ55206.1;gbkey=CDS;locus_tag=SPD_1344;product=hypothetical protein;protein_id=ABJ55206.1;transl_table=11
CP000410.2	Genbank	gene	1358306	1358788	.	-	.	ID=gene-SPD_1345;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SPD_1345
CP000410.2	Genbank	CDS	1358306	1358788	.	-	0	ID=cds-ABJ54786.1;Parent=gene-SPD_1345;Dbxref=NCBI_GP:ABJ54786.1;Name=ABJ54786.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1517%3B equivalent gene in S.pneumoniae R6 %3D spr1369%3B identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462;gbkey=CDS;gene=greA;locus_tag=SPD_1345;product=transcription elongation factor GreA;protein_id=ABJ54786.1;transl_table=11
CP000410.2	Genbank	gene	1358859	1360514	.	-	.	ID=gene-SPD_1346;Name=SPD_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1346
CP000410.2	Genbank	CDS	1358859	1360514	.	-	0	ID=cds-ABJ53954.1;Parent=gene-SPD_1346;Dbxref=NCBI_GP:ABJ53954.1;Name=ABJ53954.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1518%3B equivalent gene in S.pneumoniae R6 %3D spr1370%3B identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247%3B COG1559;gbkey=CDS;locus_tag=SPD_1346;product=putative BCR%2C putative;protein_id=ABJ53954.1;transl_table=11
CP000410.2	Genbank	gene	1360595	1361089	.	-	.	ID=gene-SPD_1347;Name=SPD_1347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1347
CP000410.2	Genbank	CDS	1360595	1361089	.	-	0	ID=cds-ABJ55029.1;Parent=gene-SPD_1347;Dbxref=NCBI_GP:ABJ55029.1;Name=ABJ55029.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1519%3B equivalent gene in S.pneumoniae R6 %3D spr1371%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1347;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55029.1;transl_table=11
CP000410.2	Genbank	gene	1361086	1361550	.	-	.	ID=gene-SPD_1348;Name=SPD_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1348
CP000410.2	Genbank	CDS	1361086	1361550	.	-	0	ID=cds-ABJ54563.1;Parent=gene-SPD_1348;Dbxref=NCBI_GP:ABJ54563.1;Name=ABJ54563.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1520%3B equivalent gene in S.pneumoniae R6 %3D spr1372%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1348;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ54563.1;transl_table=11
CP000410.2	Genbank	gene	1361560	1362894	.	-	.	ID=gene-SPD_1349;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=SPD_1349
CP000410.2	Genbank	CDS	1361560	1362894	.	-	0	ID=cds-ABJ53680.1;Parent=gene-SPD_1349;Dbxref=NCBI_GP:ABJ53680.1;Name=ABJ53680.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1521%3B equivalent gene in S.pneumoniae R6 %3D spr1373%3B identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01082;gbkey=CDS;gene=murC;locus_tag=SPD_1349;product=UDP-N-acetylmuramate--alanine ligase;protein_id=ABJ53680.1;transl_table=11
CP000410.2	Genbank	gene	1362905	1363522	.	-	.	ID=gene-SPD_1350;Name=SPD_1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1350
CP000410.2	Genbank	CDS	1362905	1363522	.	-	0	ID=cds-ABJ54308.1;Parent=gene-SPD_1350;Dbxref=NCBI_GP:ABJ54308.1;Name=ABJ54308.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1522%3B equivalent gene in S.pneumoniae R6 %3D spr1374;gbkey=CDS;locus_tag=SPD_1350;product=hypothetical protein;protein_id=ABJ54308.1;transl_table=11
CP000410.2	Genbank	gene	1363570	1366668	.	-	.	ID=gene-SPD_1351;Name=SPD_1351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1351
CP000410.2	Genbank	CDS	1363570	1366668	.	-	0	ID=cds-ABJ55173.1;Parent=gene-SPD_1351;Dbxref=NCBI_GP:ABJ55173.1;Name=ABJ55173.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1523%3B equivalent gene in S.pneumoniae R6 %3D spr1375%3B identified by match to protein family HMM PF00176%3B match to protein family HMM PF00271%3B match to protein family HMM PF04434;gbkey=CDS;locus_tag=SPD_1351;product=Snf2 family protein;protein_id=ABJ55173.1;transl_table=11
CP000410.2	Genbank	gene	1366761	1367927	.	-	.	ID=gene-SPD_1352;Name=SPD_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1352
CP000410.2	Genbank	CDS	1366761	1367927	.	-	0	ID=cds-ABJ55385.1;Parent=gene-SPD_1352;Dbxref=NCBI_GP:ABJ55385.1;Name=ABJ55385.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1524%3B equivalent gene in S.pneumoniae R6 %3D spr1376%3B identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=SPD_1352;product=aminotransferase%2C class II;protein_id=ABJ55385.1;transl_table=11
CP000410.2	Genbank	gene	1367935	1369029	.	-	.	ID=gene-SPD_1353;Name=SPD_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1353
CP000410.2	Genbank	CDS	1367935	1369029	.	-	0	ID=cds-ABJ54217.1;Parent=gene-SPD_1353;Dbxref=NCBI_GP:ABJ54217.1;Name=ABJ54217.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1525%3B equivalent gene in S.pneumoniae R6 %3D spr1377%3B identified by match to protein family HMM PF01053;gbkey=CDS;locus_tag=SPD_1353;product=Cys/Met metabolism PLP-dependent enzyme%2C putative;protein_id=ABJ54217.1;transl_table=11
CP000410.2	Genbank	gene	1369187	1369339	.	-	.	ID=gene-SPD_1354;Name=SPD_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1354
CP000410.2	Genbank	CDS	1369187	1369339	.	-	0	ID=cds-ABJ53693.1;Parent=gene-SPD_1354;Dbxref=NCBI_GP:ABJ53693.1;Name=ABJ53693.1;Note=This may be a degenerate gene resulting from mutation in the ATP-binding protein located just upstream. equivalent gene in S.pneumoniae R6 %3D spr1378;gbkey=CDS;locus_tag=SPD_1354;product=hypothetical protein;protein_id=ABJ53693.1;transl_table=11
CP000410.2	Genbank	gene	1369458	1369910	.	-	.	ID=gene-SPD_1355;Name=SPD_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1355
CP000410.2	Genbank	CDS	1369458	1369910	.	-	0	ID=cds-ABJ54801.1;Parent=gene-SPD_1355;Dbxref=NCBI_GP:ABJ54801.1;Name=ABJ54801.1;Note=This may be a degenerate gene resulting from mutations in an ATP-binding protein liberating the downstream gene. equivalent gene in S.pneumoniae R6 %3D spr1379;gbkey=CDS;locus_tag=SPD_1355;product=hypothetical protein;protein_id=ABJ54801.1;transl_table=11
CP000410.2	Genbank	pseudogene	1369935	1370870	.	-	.	ID=gene-SPD_1356;Name=SPD_1356;Note=The equivalent genes in S.pneumoniae R6 spr138o and spr1381 were merged here%3B ABC transporter%2C permease protein%2C authentic truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1356;pseudo=true
CP000410.2	Genbank	gene	1371042	1373000	.	-	.	ID=gene-SPD_1357;Name=aliB;gbkey=Gene;gene=aliB;gene_biotype=protein_coding;locus_tag=SPD_1357
CP000410.2	Genbank	CDS	1371042	1373000	.	-	0	ID=cds-ABJ54397.1;Parent=gene-SPD_1357;Dbxref=NCBI_GP:ABJ54397.1;Name=ABJ54397.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1527%3B equivalent gene in S.pneumoniae R6 %3D spr1382%3B identified by match to protein family HMM PF00496;gbkey=CDS;gene=aliB;locus_tag=SPD_1357;product=oligopeptide ABC transporter%2C oligopeptide-binding protein AliB;protein_id=ABJ54397.1;transl_table=11
CP000410.2	Genbank	gene	1373203	1374825	.	-	.	ID=gene-SPD_1358;Name=SPD_1358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1358
CP000410.2	Genbank	CDS	1373203	1374825	.	-	0	ID=cds-ABJ55406.1;Parent=gene-SPD_1358;Dbxref=NCBI_GP:ABJ55406.1;Name=ABJ55406.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1529%3B equivalent gene in S.pneumoniae R6 %3D spr1383%3B identified by match to protein family HMM PF01943;gbkey=CDS;locus_tag=SPD_1358;product=polysaccharide biosynthesis protein%2C putative;protein_id=ABJ55406.1;transl_table=11
CP000410.2	Genbank	gene	1374931	1376376	.	+	.	ID=gene-SPD_1359;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SPD_1359
CP000410.2	Genbank	CDS	1374931	1376376	.	+	0	ID=cds-ABJ54578.1;Parent=gene-SPD_1359;Dbxref=NCBI_GP:ABJ54578.1;Name=ABJ54578.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1530%3B equivalent gene in S.pneumoniae R6 %3D spr1384%3B identified by match to protein family HMM PF02875%3B match to protein family HMM TIGR01085;gbkey=CDS;gene=murE;locus_tag=SPD_1359;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=ABJ54578.1;transl_table=11
CP000410.2	Genbank	gene	1376422	1376616	.	-	.	ID=gene-SPD_1360;Name=SPD_1360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1360
CP000410.2	Genbank	CDS	1376422	1376616	.	-	0	ID=cds-ABJ54714.1;Parent=gene-SPD_1360;Dbxref=NCBI_GP:ABJ54714.1;Name=ABJ54714.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1531%3B equivalent gene in S.pneumoniae R6 %3D spr1385%3B identified by match to protein family HMM PF05532;gbkey=CDS;locus_tag=SPD_1360;product=hypothetical protein;protein_id=ABJ54714.1;transl_table=11
CP000410.2	Genbank	pseudogene	1376717	1377365	.	-	.	ID=gene-SPD_1361;Name=SPD_1361;Note=equivalent gene in S.pneumoniae R6 %3D spr1387%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1361;pseudo=true
CP000410.2	Genbank	gene	1377349	1377861	.	-	.	ID=gene-SPD_1362;Name=SPD_1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1362
CP000410.2	Genbank	CDS	1377349	1377861	.	-	0	ID=cds-ABJ54282.1;Parent=gene-SPD_1362;Dbxref=NCBI_GP:ABJ54282.1;Name=ABJ54282.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1533%3B equivalent gene in S.pneumoniae R6 %3D spr1388;gbkey=CDS;locus_tag=SPD_1362;product=hypothetical protein;protein_id=ABJ54282.1;transl_table=11
CP000410.2	Genbank	gene	1377948	1378883	.	-	.	ID=gene-SPD_1363;Name=ppaC;gbkey=Gene;gene=ppaC;gene_biotype=protein_coding;locus_tag=SPD_1363
CP000410.2	Genbank	CDS	1377948	1378883	.	-	0	ID=cds-ABJ55121.1;Parent=gene-SPD_1363;Dbxref=NCBI_GP:ABJ55121.1;Name=ABJ55121.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1534%3B equivalent gene in S.pneumoniae R6 %3D spr1389%3B identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833;gbkey=CDS;gene=ppaC;locus_tag=SPD_1363;product=manganese-dependent inorganic pyrophosphatase%2C putative;protein_id=ABJ55121.1;transl_table=11
CP000410.2	Genbank	gene	1378954	1379253	.	-	.	ID=gene-SPD_1364;Name=SPD_1364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1364
CP000410.2	Genbank	CDS	1378954	1379253	.	-	0	ID=cds-ABJ53644.1;Parent=gene-SPD_1364;Dbxref=NCBI_GP:ABJ53644.1;Name=ABJ53644.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1535%3B equivalent gene in S.pneumoniae R6 %3D spr1390%3B identified by match to protein family HMM PF01541;gbkey=CDS;locus_tag=SPD_1364;product=hypothetical protein;protein_id=ABJ53644.1;transl_table=11
CP000410.2	Genbank	gene	1379243	1379992	.	-	.	ID=gene-SPD_1365;Name=SPD_1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1365
CP000410.2	Genbank	CDS	1379243	1379992	.	-	0	ID=cds-ABJ54744.1;Parent=gene-SPD_1365;Dbxref=NCBI_GP:ABJ54744.1;Name=ABJ54744.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1536%3B equivalent gene in S.pneumoniae R6 %3D spr1391%3B identified by match to protein family HMM PF05175;gbkey=CDS;locus_tag=SPD_1365;product=hypothetical protein;protein_id=ABJ54744.1;transl_table=11
CP000410.2	Genbank	gene	1380046	1380405	.	-	.	ID=gene-SPD_1366;Name=SPD_1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1366
CP000410.2	Genbank	CDS	1380046	1380405	.	-	0	ID=cds-ABJ54781.1;Parent=gene-SPD_1366;Dbxref=NCBI_GP:ABJ54781.1;Name=ABJ54781.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1537%3B equivalent gene in S.pneumoniae R6 %3D spr1392%3B identified by match to protein family HMM PF00575;gbkey=CDS;locus_tag=SPD_1366;product=general stress protein 13%2C putative;protein_id=ABJ54781.1;transl_table=11
CP000410.2	Genbank	gene	1380407	1381807	.	-	.	ID=gene-SPD_1367;Name=SPD_1367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1367
CP000410.2	Genbank	CDS	1380407	1381807	.	-	0	ID=cds-ABJ53874.1;Parent=gene-SPD_1367;Dbxref=NCBI_GP:ABJ53874.1;Name=ABJ53874.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1538%3B equivalent gene in S.pneumoniae R6 %3D spr1393%3B identified by match to protein family HMM PF00160%3B match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_1367;product=Cof family protein/peptidyl-prolyl cis-trans isomerase%2C cyclophilin type;protein_id=ABJ53874.1;transl_table=11
CP000410.2	Genbank	gene	1382102	1382341	.	-	.	ID=gene-SPD_1368;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SPD_1368
CP000410.2	Genbank	CDS	1382102	1382341	.	-	0	ID=cds-ABJ55046.1;Parent=gene-SPD_1368;Dbxref=NCBI_GP:ABJ55046.1;Name=ABJ55046.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1539%3B equivalent gene in S.pneumoniae R6 %3D spr1394%3B identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165;gbkey=CDS;gene=rpsR;locus_tag=SPD_1368;product=ribosomal protein S18;protein_id=ABJ55046.1;transl_table=11
CP000410.2	Genbank	gene	1382373	1382843	.	-	.	ID=gene-SPD_1369;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=SPD_1369
CP000410.2	Genbank	CDS	1382373	1382843	.	-	0	ID=cds-ABJ55175.1;Parent=gene-SPD_1369;Dbxref=NCBI_GP:ABJ55175.1;Name=ABJ55175.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1540%3B equivalent gene in S.pneumoniae R6 %3D spr1395%3B identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;gene=ssb;locus_tag=SPD_1369;product=single-strand binding protein;protein_id=ABJ55175.1;transl_table=11
CP000410.2	Genbank	gene	1382855	1383145	.	-	.	ID=gene-SPD_1370;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SPD_1370
CP000410.2	Genbank	CDS	1382855	1383145	.	-	0	ID=cds-ABJ55036.1;Parent=gene-SPD_1370;Dbxref=NCBI_GP:ABJ55036.1;Name=ABJ55036.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1541%3B equivalent gene in S.pneumoniae R6 %3D spr1396%3B identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166;gbkey=CDS;gene=rpsF;locus_tag=SPD_1370;product=ribosomal protein S6;protein_id=ABJ55036.1;transl_table=11
CP000410.2	Genbank	gene	1383298	1384641	.	-	.	ID=gene-SPD_1371;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=SPD_1371
CP000410.2	Genbank	CDS	1383298	1384641	.	-	0	ID=cds-ABJ53931.1;Parent=gene-SPD_1371;Dbxref=NCBI_GP:ABJ53931.1;Name=ABJ53931.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1542%3B equivalent gene in S.pneumoniae R6 %3D spr1397%3B identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00457;gbkey=CDS;gene=asnS;locus_tag=SPD_1371;product=asparaginyl-tRNA synthetase;protein_id=ABJ53931.1;transl_table=11
CP000410.2	Genbank	gene	1384660	1385025	.	-	.	ID=gene-SPD_1372;Name=SPD_1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1372
CP000410.2	Genbank	CDS	1384660	1385025	.	-	0	ID=cds-ABJ54116.1;Parent=gene-SPD_1372;Dbxref=NCBI_GP:ABJ54116.1;Name=ABJ54116.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1398%3B identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=SPD_1372;product=glyoxalase family protein;protein_id=ABJ54116.1;transl_table=11
CP000410.2	Genbank	gene	1385018	1386205	.	-	.	ID=gene-SPD_1373;Name=aspC;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=SPD_1373
CP000410.2	Genbank	CDS	1385018	1386205	.	-	0	ID=cds-ABJ54631.1;Parent=gene-SPD_1373;Dbxref=NCBI_GP:ABJ54631.1;Name=ABJ54631.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1544%3B equivalent gene in S.pneumoniae R6 %3D spr1399%3B identified by match to protein family HMM PF00155;gbkey=CDS;gene=aspC;locus_tag=SPD_1373;product=aspartate aminotransferase;protein_id=ABJ54631.1;transl_table=11
CP000410.2	Genbank	gene	1386202	1386633	.	-	.	ID=gene-SPD_1374;Name=SPD_1374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1374
CP000410.2	Genbank	CDS	1386202	1386633	.	-	0	ID=cds-ABJ54399.1;Parent=gene-SPD_1374;Dbxref=NCBI_GP:ABJ54399.1;Name=ABJ54399.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1545%3B equivalent gene in S.pneumoniae R6 %3D spr1400%3B identified by match to protein family HMM PF03413;gbkey=CDS;locus_tag=SPD_1374;product=hypothetical protein;protein_id=ABJ54399.1;transl_table=11
CP000410.2	Genbank	gene	1387011	1387559	.	+	.	ID=gene-SPD_1375;Name=SPD_1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1375
CP000410.2	Genbank	CDS	1387011	1387559	.	+	0	ID=cds-ABJ55493.1;Parent=gene-SPD_1375;Dbxref=NCBI_GP:ABJ55493.1;Name=ABJ55493.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1546%3B equivalent gene in S.pneumoniae R6 %3D spr1402%3B identified by match to protein family HMM PF02525%3B match to protein family HMM PF03358;gbkey=CDS;locus_tag=SPD_1375;product=NADPH-dependent FMN reductase%2C putative;protein_id=ABJ55493.1;transl_table=11
CP000410.2	Genbank	gene	1387797	1395452	.	-	.	ID=gene-SPD_1376;Name=SPD_1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1376
CP000410.2	Genbank	CDS	1387797	1395452	.	-	0	ID=cds-ABJ54195.1;Parent=gene-SPD_1376;Dbxref=NCBI_GP:ABJ54195.1;Name=ABJ54195.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1403%3B identified by match to protein family HMM PF01391%3B match to protein family HMM PF04650%3B match to protein family HMM PF07501%3B match to protein family HMM PF07554%3B match to protein family HMM TIGR01167%3B match to protein family HMM TIGR01168;gbkey=CDS;locus_tag=SPD_1376;product=G5 domain family protein;protein_id=ABJ54195.1;transl_table=11
CP000410.2	Genbank	gene	1395668	1397152	.	+	.	ID=gene-SPD_1377;Name=SPD_1377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1377
CP000410.2	Genbank	CDS	1395668	1397152	.	+	0	ID=cds-ABJ54868.1;Parent=gene-SPD_1377;Dbxref=NCBI_GP:ABJ54868.1;Name=ABJ54868.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1404%3B identified by match to protein family HMM PF05043;gbkey=CDS;locus_tag=SPD_1377;product=hypothetical protein;protein_id=ABJ54868.1;transl_table=11
CP000410.2	Genbank	gene	1397203	1397931	.	-	.	ID=gene-SPD_1378;Name=SPD_1378;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1378
CP000410.2	Genbank	CDS	1397203	1397931	.	-	0	ID=cds-ABJ55199.1;Parent=gene-SPD_1378;Dbxref=NCBI_GP:ABJ55199.1;Name=ABJ55199.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1547%3B equivalent gene in S.pneumoniae R6 %3D spr1405%3B identified by match to protein family HMM PF03883;gbkey=CDS;locus_tag=SPD_1378;product=hypothetical protein;protein_id=ABJ55199.1;transl_table=11
CP000410.2	Genbank	gene	1398010	1398174	.	-	.	ID=gene-SPD_1379;Name=SPD_1379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1379
CP000410.2	Genbank	CDS	1398010	1398174	.	-	0	ID=cds-ABJ54113.1;Parent=gene-SPD_1379;Dbxref=NCBI_GP:ABJ54113.1;Name=ABJ54113.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1406;gbkey=CDS;locus_tag=SPD_1379;product=hypothetical protein;protein_id=ABJ54113.1;transl_table=11
CP000410.2	Genbank	gene	1398341	1399936	.	-	.	ID=gene-SPD_1380;Name=SPD_1380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1380
CP000410.2	Genbank	CDS	1398341	1399936	.	-	0	ID=cds-ABJ55402.1;Parent=gene-SPD_1380;Dbxref=NCBI_GP:ABJ55402.1;Name=ABJ55402.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1548%3B equivalent gene in S.pneumoniae R6 %3D spr1407;gbkey=CDS;locus_tag=SPD_1380;product=hypothetical protein;protein_id=ABJ55402.1;transl_table=11
CP000410.2	Genbank	gene	1399948	1400358	.	-	.	ID=gene-SPD_1381;Name=def-2;gbkey=Gene;gene=def-2;gene_biotype=protein_coding;locus_tag=SPD_1381
CP000410.2	Genbank	CDS	1399948	1400358	.	-	0	ID=cds-ABJ53790.1;Parent=gene-SPD_1381;Dbxref=NCBI_GP:ABJ53790.1;Name=ABJ53790.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1549%3B equivalent gene in S.pneumoniae R6 %3D spr1408%3B identified by match to protein family HMM PF01327;gbkey=CDS;gene=def-2;locus_tag=SPD_1381;product=polypeptide deformylase;protein_id=ABJ53790.1;transl_table=11
CP000410.2	Genbank	gene	1400474	1401265	.	-	.	ID=gene-SPD_1382;Name=SPD_1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1382
CP000410.2	Genbank	CDS	1400474	1401265	.	-	0	ID=cds-ABJ54620.1;Parent=gene-SPD_1382;Dbxref=NCBI_GP:ABJ54620.1;Name=ABJ54620.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1550%3B equivalent gene in S.pneumoniae R6 %3D spr1409%3B identified by match to protein family HMM PF00043%3B match to protein family HMM PF02798;gbkey=CDS;locus_tag=SPD_1382;product=glutathione S-transferase family protein;protein_id=ABJ54620.1;transl_table=11
CP000410.2	Genbank	gene	1401278	1403974	.	-	.	ID=gene-SPD_1383;Name=SPD_1383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1383
CP000410.2	Genbank	CDS	1401278	1403974	.	-	0	ID=cds-ABJ54610.1;Parent=gene-SPD_1383;Dbxref=NCBI_GP:ABJ54610.1;Name=ABJ54610.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1551%3B equivalent gene in S.pneumoniae R6 %3D spr1410%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494;gbkey=CDS;locus_tag=SPD_1383;product=cation-transporting ATPase%2C E1-E2 family protein;protein_id=ABJ54610.1;transl_table=11
CP000410.2	Genbank	gene	1404278	1405462	.	+	.	ID=gene-SPD_1384;Name=SPD_1384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1384
CP000410.2	Genbank	CDS	1404278	1405462	.	+	0	ID=cds-ABJ55467.1;Parent=gene-SPD_1384;Dbxref=NCBI_GP:ABJ55467.1;Name=ABJ55467.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1552%3B equivalent gene in S.pneumoniae R6 %3D spr1411%3B identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=SPD_1384;product=cation efflux family protein;protein_id=ABJ55467.1;transl_table=11
CP000410.2	Genbank	gene	1405605	1407476	.	-	.	ID=gene-SPD_1385;Name=SPD_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1385
CP000410.2	Genbank	CDS	1405605	1407476	.	-	0	ID=cds-ABJ54437.1;Parent=gene-SPD_1385;Dbxref=NCBI_GP:ABJ54437.1;Name=ABJ54437.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1553%3B equivalent gene in S.pneumoniae R6 %3D spr1412%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1385;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54437.1;transl_table=11
CP000410.2	Genbank	gene	1407473	1408657	.	-	.	ID=gene-SPD_1386;Name=SPD_1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1386
CP000410.2	Genbank	CDS	1407473	1408657	.	-	0	ID=cds-ABJ55296.1;Parent=gene-SPD_1386;Dbxref=NCBI_GP:ABJ55296.1;Name=ABJ55296.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1554%3B equivalent gene in S.pneumoniae R6 %3D spr1413%3B identified by match to protein family HMM PF01743;gbkey=CDS;locus_tag=SPD_1386;product=polyA polymerase family protein;protein_id=ABJ55296.1;transl_table=11
CP000410.2	Genbank	gene	1408669	1409436	.	-	.	ID=gene-SPD_1387;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=SPD_1387
CP000410.2	Genbank	CDS	1408669	1409436	.	-	0	ID=cds-ABJ53920.1;Parent=gene-SPD_1387;Dbxref=NCBI_GP:ABJ53920.1;Name=ABJ53920.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1555%3B equivalent gene in S.pneumoniae R6 %3D spr1414%3B identified by match to protein family HMM PF01113%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036;gbkey=CDS;gene=dapB;locus_tag=SPD_1387;product=dihydrodipicolinate reductase;protein_id=ABJ53920.1;transl_table=11
CP000410.2	Genbank	gene	1409713	1410561	.	-	.	ID=gene-SPD_1388;Name=SPD_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1388
CP000410.2	Genbank	CDS	1409713	1410561	.	-	0	ID=cds-ABJ55113.1;Parent=gene-SPD_1388;Dbxref=NCBI_GP:ABJ55113.1;Name=ABJ55113.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1557%3B equivalent gene in S.pneumoniae R6 %3D spr1415%3B identified by match to protein family HMM PF02645%3B match to protein family HMM TIGR00762;gbkey=CDS;locus_tag=SPD_1388;product=DegV family protein;protein_id=ABJ55113.1;transl_table=11
CP000410.2	Genbank	gene	1410563	1410937	.	-	.	ID=gene-SPD_1389;Name=SPD_1389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1389
CP000410.2	Genbank	CDS	1410563	1410937	.	-	0	ID=cds-ABJ53707.1;Parent=gene-SPD_1389;Dbxref=NCBI_GP:ABJ53707.1;Name=ABJ53707.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1558%3B equivalent gene in S.pneumoniae R6 %3D spr1416%3B identified by match to protein family HMM PF06619;gbkey=CDS;locus_tag=SPD_1389;product=hypothetical protein;protein_id=ABJ53707.1;transl_table=11
CP000410.2	Genbank	gene	1411011	1412363	.	-	.	ID=gene-SPD_1390;Name=SPD_1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1390
CP000410.2	Genbank	CDS	1411011	1412363	.	-	0	ID=cds-ABJ54718.1;Parent=gene-SPD_1390;Dbxref=NCBI_GP:ABJ54718.1;Name=ABJ54718.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1559%3B equivalent gene in S.pneumoniae R6 %3D spr1417%3B identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455;gbkey=CDS;locus_tag=SPD_1390;product=phosphoglucomutase/phosphomannomutase family protein;protein_id=ABJ54718.1;transl_table=11
CP000410.2	Genbank	gene	1412387	1413166	.	-	.	ID=gene-SPD_1391;Name=SPD_1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1391
CP000410.2	Genbank	CDS	1412387	1413166	.	-	0	ID=cds-ABJ55369.1;Parent=gene-SPD_1391;Dbxref=NCBI_GP:ABJ55369.1;Name=ABJ55369.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1560%3B equivalent gene in S.pneumoniae R6 %3D spr1418%3B identified by match to protein family HMM PF07949;gbkey=CDS;locus_tag=SPD_1391;product=YbbR-like lipoprotein%2C putative;protein_id=ABJ55369.1;transl_table=11
CP000410.2	Genbank	gene	1413153	1413968	.	-	.	ID=gene-SPD_1392;Name=SPD_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1392
CP000410.2	Genbank	CDS	1413153	1413968	.	-	0	ID=cds-ABJ54564.1;Parent=gene-SPD_1392;Dbxref=NCBI_GP:ABJ54564.1;Name=ABJ54564.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1561%3B equivalent gene in S.pneumoniae R6 %3D spr1419%3B identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159;gbkey=CDS;locus_tag=SPD_1392;product=conserved hypothetical protein TIGR00159;protein_id=ABJ54564.1;transl_table=11
CP000410.2	Genbank	gene	1414146	1415114	.	+	.	ID=gene-SPD_1393;Name=SPD_1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1393
CP000410.2	Genbank	CDS	1414146	1415114	.	+	0	ID=cds-ABJ54627.1;Parent=gene-SPD_1393;Dbxref=NCBI_GP:ABJ54627.1;Name=ABJ54627.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1563%3B equivalent gene in S.pneumoniae R6 %3D spr1421%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=SPD_1393;product=pyridine nucleotide-disulfide oxidoreductase family protein;protein_id=ABJ54627.1;transl_table=11
CP000410.2	Genbank	gene	1415148	1416059	.	-	.	ID=gene-SPD_1394;Name=SPD_1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1394
CP000410.2	Genbank	CDS	1415148	1416059	.	-	0	ID=cds-ABJ53810.1;Parent=gene-SPD_1394;Dbxref=NCBI_GP:ABJ53810.1;Name=ABJ53810.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1564%3B equivalent gene in S.pneumoniae R6 %3D spr1422%3B identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647%3B COG1481;gbkey=CDS;locus_tag=SPD_1394;product=putative BCR;protein_id=ABJ53810.1;transl_table=11
CP000410.2	Genbank	gene	1416056	1417033	.	-	.	ID=gene-SPD_1395;Name=SPD_1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1395
CP000410.2	Genbank	CDS	1416056	1417033	.	-	0	ID=cds-ABJ54751.1;Parent=gene-SPD_1395;Dbxref=NCBI_GP:ABJ54751.1;Name=ABJ54751.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1565%3B equivalent gene in S.pneumoniae R6 %3D spr1423%3B identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826;gbkey=CDS;locus_tag=SPD_1395;product=hypothetical protein;protein_id=ABJ54751.1;transl_table=11
CP000410.2	Genbank	gene	1417030	1417920	.	-	.	ID=gene-SPD_1396;Name=SPD_1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1396
CP000410.2	Genbank	CDS	1417030	1417920	.	-	0	ID=cds-ABJ53642.1;Parent=gene-SPD_1396;Dbxref=NCBI_GP:ABJ53642.1;Name=ABJ53642.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1566%3B equivalent gene in S.pneumoniae R6 %3D spr1424%3B identified by match to protein family HMM PF03668;gbkey=CDS;locus_tag=SPD_1396;product=hypothetical protein;protein_id=ABJ53642.1;transl_table=11
CP000410.2	Genbank	gene	1417972	1418352	.	-	.	ID=gene-SPD_1397;Name=SPD_1397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1397
CP000410.2	Genbank	CDS	1417972	1418352	.	-	0	ID=cds-ABJ54789.1;Parent=gene-SPD_1397;Dbxref=NCBI_GP:ABJ54789.1;Name=ABJ54789.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1567%3B equivalent gene in S.pneumoniae R6 %3D spr1425%3B identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;locus_tag=SPD_1397;product=endoribonuclease L-PSP;protein_id=ABJ54789.1;transl_table=11
CP000410.2	Genbank	gene	1418363	1418950	.	-	.	ID=gene-SPD_1398;Name=SPD_1398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1398
CP000410.2	Genbank	CDS	1418363	1418950	.	-	0	ID=cds-ABJ53689.1;Parent=gene-SPD_1398;Dbxref=NCBI_GP:ABJ53689.1;Name=ABJ53689.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1568%3B equivalent gene in S.pneumoniae R6 %3D spr1426%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00650;gbkey=CDS;locus_tag=SPD_1398;product=GTP-binding protein;protein_id=ABJ53689.1;transl_table=11
CP000410.2	Genbank	gene	1418959	1420191	.	-	.	ID=gene-SPD_1399;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SPD_1399
CP000410.2	Genbank	CDS	1418959	1420191	.	-	0	ID=cds-ABJ55423.1;Parent=gene-SPD_1399;Dbxref=NCBI_GP:ABJ55423.1;Name=ABJ55423.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1569%3B equivalent gene in S.pneumoniae R6 %3D spr1427%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382;gbkey=CDS;gene=clpX;locus_tag=SPD_1399;product=ATP-dependent Clp protease%2C ATP-binding subunit ClpX;protein_id=ABJ55423.1;transl_table=11
CP000410.2	Genbank	gene	1420223	1420393	.	-	.	ID=gene-SPD_1400;Name=SPD_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1400
CP000410.2	Genbank	CDS	1420223	1420393	.	-	0	ID=cds-ABJ54340.1;Parent=gene-SPD_1400;Dbxref=NCBI_GP:ABJ54340.1;Name=ABJ54340.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1570%3B equivalent gene in S.pneumoniae R6 %3D spr1428;gbkey=CDS;locus_tag=SPD_1400;product=hypothetical protein;protein_id=ABJ54340.1;transl_table=11
CP000410.2	Genbank	gene	1420393	1420899	.	-	.	ID=gene-SPD_1401;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=SPD_1401
CP000410.2	Genbank	CDS	1420393	1420899	.	-	0	ID=cds-ABJ55262.1;Parent=gene-SPD_1401;Dbxref=NCBI_GP:ABJ55262.1;Name=ABJ55262.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1571%3B equivalent gene in S.pneumoniae R6 %3D spr1429%3B identified by match to protein family HMM PF00186;gbkey=CDS;gene=folA;locus_tag=SPD_1401;product=dihydrofolate reductase;protein_id=ABJ55262.1;transl_table=11
CP000410.2	Genbank	gene	1421029	1421547	.	-	.	ID=gene-SPD_1402;Name=SPD_1402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1402
CP000410.2	Genbank	CDS	1421029	1421547	.	-	0	ID=cds-ABJ54111.1;Parent=gene-SPD_1402;Dbxref=NCBI_GP:ABJ54111.1;Name=ABJ54111.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1572%3B equivalent gene in S.pneumoniae R6 %3D spr1430%3B identified by match to protein family HMM PF00210;gbkey=CDS;locus_tag=SPD_1402;product=non-heme iron-containing ferritin;protein_id=ABJ54111.1;transl_table=11
CP000410.2	Genbank	gene	1422043	1423515	.	-	.	ID=gene-SPD_1403;Name=lytC;gbkey=Gene;gene=lytC;gene_biotype=protein_coding;locus_tag=SPD_1403
CP000410.2	Genbank	CDS	1422043	1423515	.	-	0	ID=cds-ABJ54149.1;Parent=gene-SPD_1403;Dbxref=NCBI_GP:ABJ54149.1;Name=ABJ54149.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1573%3B equivalent gene in S.pneumoniae R6 %3D spr1431%3B identified by match to protein family HMM PF01183%3B match to protein family HMM PF01473;gbkey=CDS;gene=lytC;locus_tag=SPD_1403;product=1%2C4-beta-N-acetylmuramidase%2C putative;protein_id=ABJ54149.1;transl_table=11
CP000410.2	Genbank	gene	1423586	1424344	.	-	.	ID=gene-SPD_1404;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=SPD_1404
CP000410.2	Genbank	CDS	1423586	1424344	.	-	0	ID=cds-ABJ55094.1;Parent=gene-SPD_1404;Dbxref=NCBI_GP:ABJ55094.1;Name=ABJ55094.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1574%3B equivalent gene in S.pneumoniae R6 %3D spr1432%3B identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419;gbkey=CDS;gene=tpiA;locus_tag=SPD_1404;product=triosephosphate isomerase;protein_id=ABJ55094.1;transl_table=11
CP000410.2	Genbank	gene	1424442	1425119	.	-	.	ID=gene-SPD_1405;Name=SPD_1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1405
CP000410.2	Genbank	CDS	1424442	1425119	.	-	0	ID=cds-ABJ54327.1;Parent=gene-SPD_1405;Dbxref=NCBI_GP:ABJ54327.1;Name=ABJ54327.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1575%3B equivalent gene in S.pneumoniae R6 %3D spr1433%3B identified by match to protein family HMM PF04271%3B match to protein family HMM TIGR01446;gbkey=CDS;locus_tag=SPD_1405;product=hypothetical protein;protein_id=ABJ54327.1;transl_table=11
CP000410.2	Genbank	gene	1425128	1426072	.	-	.	ID=gene-SPD_1406;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=SPD_1406
CP000410.2	Genbank	CDS	1425128	1426072	.	-	0	ID=cds-ABJ55179.1;Parent=gene-SPD_1406;Dbxref=NCBI_GP:ABJ55179.1;Name=ABJ55179.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1576%3B equivalent gene in S.pneumoniae R6 %3D spr1434%3B identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001;gbkey=CDS;gene=metA;locus_tag=SPD_1406;product=homoserine O-succinyltransferase;protein_id=ABJ55179.1;transl_table=11
CP000410.2	Genbank	gene	1426254	1426784	.	-	.	ID=gene-SPD_1407;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=SPD_1407
CP000410.2	Genbank	CDS	1426254	1426784	.	-	0	ID=cds-ABJ54553.1;Parent=gene-SPD_1407;Dbxref=NCBI_GP:ABJ54553.1;Name=ABJ54553.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1577%3B equivalent gene in S.pneumoniae R6 %3D spr1435%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01090;gbkey=CDS;gene=apt;locus_tag=SPD_1407;product=adenine phosphoribosyltransferase;protein_id=ABJ54553.1;transl_table=11
CP000410.2	Genbank	gene	1426854	1427612	.	-	.	ID=gene-SPD_1408;Name=SPD_1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1408
CP000410.2	Genbank	CDS	1426854	1427612	.	-	0	ID=cds-ABJ55389.1;Parent=gene-SPD_1408;Dbxref=NCBI_GP:ABJ55389.1;Name=ABJ55389.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1578%3B equivalent gene in S.pneumoniae R6 %3D spr1436;gbkey=CDS;locus_tag=SPD_1408;product=hypothetical protein;protein_id=ABJ55389.1;transl_table=11
CP000410.2	Genbank	gene	1428113	1429243	.	-	.	ID=gene-SPD_1409;Name=SPD_1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1409
CP000410.2	Genbank	CDS	1428113	1429243	.	-	0	ID=cds-ABJ53802.1;Parent=gene-SPD_1409;Dbxref=NCBI_GP:ABJ53802.1;Name=ABJ53802.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1580%3B equivalent gene in S.pneumoniae R6 %3D spr1437%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459;gbkey=CDS;locus_tag=SPD_1409;product=sugar ABC transporter%2C ATP-binding protein;protein_id=ABJ53802.1;transl_table=11
CP000410.2	Genbank	gene	1429526	1429611	.	-	.	ID=gene-SPD_1410;Name=SPD_1410;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1410
CP000410.2	Genbank	tRNA	1429526	1429611	.	-	.	ID=rna-SPD_1410;Parent=gene-SPD_1410;gbkey=tRNA;locus_tag=SPD_1410;product=tRNA-Leu
CP000410.2	Genbank	exon	1429526	1429611	.	-	.	ID=exon-SPD_1410-1;Parent=rna-SPD_1410;gbkey=tRNA;locus_tag=SPD_1410;product=tRNA-Leu
CP000410.2	Genbank	gene	1429693	1430268	.	-	.	ID=gene-SPD_1411;Name=SPD_1411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1411
CP000410.2	Genbank	CDS	1429693	1430268	.	-	0	ID=cds-ABJ54681.1;Parent=gene-SPD_1411;Dbxref=NCBI_GP:ABJ54681.1;Name=ABJ54681.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1583%3B equivalent gene in S.pneumoniae R6 %3D spr1438%3B identified by match to protein family HMM PF00857;gbkey=CDS;locus_tag=SPD_1411;product=isochorismatase family protein;protein_id=ABJ54681.1;transl_table=11
CP000410.2	Genbank	gene	1430268	1431056	.	-	.	ID=gene-SPD_1412;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=SPD_1412
CP000410.2	Genbank	CDS	1430268	1431056	.	-	0	ID=cds-ABJ54045.1;Parent=gene-SPD_1412;Dbxref=NCBI_GP:ABJ54045.1;Name=ABJ54045.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1584%3B equivalent gene in S.pneumoniae R6 %3D spr1439%3B identified by match to protein family HMM PF06018%3B match to protein family HMM PF08222%3B match to protein family HMM TIGR02787;gbkey=CDS;gene=codY;locus_tag=SPD_1412;product=GTP-sensing transcriptional pleiotropic repressor CodY;protein_id=ABJ54045.1;transl_table=11
CP000410.2	Genbank	gene	1431320	1432894	.	-	.	ID=gene-SPD_1413;Name=SPD_1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1413
CP000410.2	Genbank	CDS	1431320	1432894	.	-	0	ID=cds-ABJ54307.1;Parent=gene-SPD_1413;Dbxref=NCBI_GP:ABJ54307.1;Name=ABJ54307.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1586%3B equivalent gene in S.pneumoniae R6 %3D spr1440%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=SPD_1413;product=ATP-dependent RNA helicase%2C putative;protein_id=ABJ54307.1;transl_table=11
CP000410.2	Genbank	gene	1433093	1434319	.	-	.	ID=gene-SPD_1414;Name=SPD_1414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1414
CP000410.2	Genbank	CDS	1433093	1434319	.	-	0	ID=cds-ABJ54765.1;Parent=gene-SPD_1414;Dbxref=NCBI_GP:ABJ54765.1;Name=ABJ54765.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1587%3B equivalent gene in S.pneumoniae R6 %3D spr1441%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_1414;product=oxalate:formate antiporter;protein_id=ABJ54765.1;transl_table=11
CP000410.2	Genbank	gene	1434509	1435825	.	+	.	ID=gene-SPD_1415;Name=SPD_1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1415
CP000410.2	Genbank	CDS	1434509	1435825	.	+	0	ID=cds-ABJ53716.1;Parent=gene-SPD_1415;Dbxref=NCBI_GP:ABJ53716.1;Name=ABJ53716.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1588%3B equivalent gene in S.pneumoniae R6 %3D spr1442%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=SPD_1415;product=oxidoreductase%2C pyridine nucleotide-disulfide%2C class I;protein_id=ABJ53716.1;transl_table=11
CP000410.2	Genbank	gene	1435924	1437267	.	+	.	ID=gene-SPD_1416;Name=SPD_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1416
CP000410.2	Genbank	CDS	1435924	1437267	.	+	0	ID=cds-ABJ54839.1;Parent=gene-SPD_1416;Dbxref=NCBI_GP:ABJ54839.1;Name=ABJ54839.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1589%3B equivalent gene in S.pneumoniae R6 %3D spr1443;gbkey=CDS;locus_tag=SPD_1416;product=hypothetical protein;protein_id=ABJ54839.1;transl_table=11
CP000410.2	Genbank	gene	1437267	1438049	.	+	.	ID=gene-SPD_1417;Name=SPD_1417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1417
CP000410.2	Genbank	CDS	1437267	1438049	.	+	0	ID=cds-ABJ54239.1;Parent=gene-SPD_1417;Dbxref=NCBI_GP:ABJ54239.1;Name=ABJ54239.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1590%3B equivalent gene in S.pneumoniae R6 %3D spr1444%3B identified by match to protein family HMM PF07685;gbkey=CDS;locus_tag=SPD_1417;product=hypothetical protein;protein_id=ABJ54239.1;transl_table=11
CP000410.2	Genbank	gene	1438175	1439257	.	+	.	ID=gene-SPD_1418;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=SPD_1418
CP000410.2	Genbank	CDS	1438175	1439257	.	+	0	ID=cds-ABJ54419.1;Parent=gene-SPD_1418;Dbxref=NCBI_GP:ABJ54419.1;Name=ABJ54419.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1591%3B equivalent gene in S.pneumoniae R6 %3D spr1445%3B identified by match to protein family HMM PF00557;gbkey=CDS;gene=pepQ;locus_tag=SPD_1418;product=proline dipeptidase PepQ;protein_id=ABJ54419.1;transl_table=11
CP000410.2	Genbank	gene	1439250	1439453	.	+	.	ID=gene-SPD_1419;Name=SPD_1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1419
CP000410.2	Genbank	CDS	1439250	1439453	.	+	0	ID=cds-ABJ55488.1;Parent=gene-SPD_1419;Dbxref=NCBI_GP:ABJ55488.1;Name=ABJ55488.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1592;gbkey=CDS;locus_tag=SPD_1419;product=hypothetical protein;protein_id=ABJ55488.1;transl_table=11
CP000410.2	Genbank	pseudogene	1439580	1440402	.	-	.	ID=gene-SPD_1420;Name=SPD_1420;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1485%3B equivalent gene in S.pneumoniae R6 %3D spr1447%3B IS3-Spn1%2C transposase%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1420;pseudo=true
CP000410.2	Genbank	pseudogene	1440628	1440840	.	-	.	ID=gene-SPD_1421;Name=SPD_1421;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1596%3B equivalent gene in S.pneumoniae R6 %3D spr1448%3B IS3-Spn1%2C hypothetical protein%2C interruption;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1421;pseudo=true
CP000410.2	Genbank	gene	1441072	1441533	.	-	.	ID=gene-SPD_1422;Name=SPD_1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1422
CP000410.2	Genbank	CDS	1441072	1441533	.	-	0	ID=cds-ABJ54062.1;Parent=gene-SPD_1422;Dbxref=NCBI_GP:ABJ54062.1;Name=ABJ54062.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1597%3B equivalent gene in S.pneumoniae R6 %3D spr1449;gbkey=CDS;locus_tag=SPD_1422;product=membrane protein%2C putative;protein_id=ABJ54062.1;transl_table=11
CP000410.2	Genbank	gene	1441511	1442284	.	-	.	ID=gene-SPD_1423;Name=SPD_1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1423
CP000410.2	Genbank	CDS	1441511	1442284	.	-	0	ID=cds-ABJ55137.1;Parent=gene-SPD_1423;Dbxref=NCBI_GP:ABJ55137.1;Name=ABJ55137.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1598%3B equivalent gene in S.pneumoniae R6 %3D spr1450;gbkey=CDS;locus_tag=SPD_1423;product=phosphomethylpyrimidine kinase%2C putative;protein_id=ABJ55137.1;transl_table=11
CP000410.2	Genbank	gene	1442274	1443023	.	-	.	ID=gene-SPD_1424;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=SPD_1424
CP000410.2	Genbank	CDS	1442274	1443023	.	-	0	ID=cds-ABJ55081.1;Parent=gene-SPD_1424;Dbxref=NCBI_GP:ABJ55081.1;Name=ABJ55081.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1599%3B equivalent gene in S.pneumoniae R6 %3D spr1451%3B identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071;gbkey=CDS;gene=truA;locus_tag=SPD_1424;product=tRNA pseudouridine synthase A;protein_id=ABJ55081.1;transl_table=11
CP000410.2	Genbank	gene	1443336	1444487	.	-	.	ID=gene-SPD_1425;Name=SPD_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1425
CP000410.2	Genbank	CDS	1443336	1444487	.	-	0	ID=cds-ABJ54231.1;Parent=gene-SPD_1425;Dbxref=NCBI_GP:ABJ54231.1;Name=ABJ54231.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1600%3B equivalent gene in S.pneumoniae R6 %3D spr1453%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_1425;product=transporter%2C major facilitator family protein;protein_id=ABJ54231.1;transl_table=11
CP000410.2	Genbank	gene	1444727	1445356	.	-	.	ID=gene-SPD_1426;Name=SPD_1426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1426
CP000410.2	Genbank	CDS	1444727	1445356	.	-	0	ID=cds-ABJ54679.1;Parent=gene-SPD_1426;Dbxref=NCBI_GP:ABJ54679.1;Name=ABJ54679.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1601%3B equivalent gene in S.pneumoniae R6 %3D spr1454;gbkey=CDS;locus_tag=SPD_1426;product=membrane protein%2C putative;protein_id=ABJ54679.1;transl_table=11
CP000410.2	Genbank	gene	1445359	1445697	.	-	.	ID=gene-SPD_1427;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=SPD_1427
CP000410.2	Genbank	CDS	1445359	1445697	.	-	0	ID=cds-ABJ54682.1;Parent=gene-SPD_1427;Dbxref=NCBI_GP:ABJ54682.1;Name=ABJ54682.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1602%3B equivalent gene in S.pneumoniae R6 %3D spr1455%3B identified by match to protein family HMM PF03831%3B match to protein family HMM TIGR00686;gbkey=CDS;gene=phnA;locus_tag=SPD_1427;product=PhnA protein;protein_id=ABJ54682.1;transl_table=11
CP000410.2	Genbank	gene	1445828	1446499	.	-	.	ID=gene-SPD_1428;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=SPD_1428
CP000410.2	Genbank	CDS	1445828	1446499	.	-	0	ID=cds-ABJ53914.1;Parent=gene-SPD_1428;Dbxref=NCBI_GP:ABJ53914.1;Name=ABJ53914.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1603%3B equivalent gene in S.pneumoniae R6 %3D spr1456%3B identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017;gbkey=CDS;gene=cmk;locus_tag=SPD_1428;product=cytidylate kinase;protein_id=ABJ53914.1;transl_table=11
CP000410.2	Genbank	gene	1446508	1446984	.	-	.	ID=gene-SPD_1429;Name=SPD_1429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1429
CP000410.2	Genbank	CDS	1446508	1446984	.	-	0	ID=cds-ABJ55054.1;Parent=gene-SPD_1429;Dbxref=NCBI_GP:ABJ55054.1;Name=ABJ55054.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1604%3B equivalent gene in S.pneumoniae R6 %3D spr1457;gbkey=CDS;locus_tag=SPD_1429;product=hypothetical protein;protein_id=ABJ55054.1;transl_table=11
CP000410.2	Genbank	gene	1447036	1447242	.	+	.	ID=gene-SPD_1430;Name=fer;gbkey=Gene;gene=fer;gene_biotype=protein_coding;locus_tag=SPD_1430
CP000410.2	Genbank	CDS	1447036	1447242	.	+	0	ID=cds-ABJ54196.1;Parent=gene-SPD_1430;Dbxref=NCBI_GP:ABJ54196.1;Name=ABJ54196.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1605%3B equivalent gene in S.pneumoniae R6 %3D spr1458;gbkey=CDS;gene=fer;locus_tag=SPD_1430;product=ferredoxin;protein_id=ABJ54196.1;transl_table=11
CP000410.2	Genbank	gene	1447304	1448257	.	-	.	ID=gene-SPD_1431;Name=SPD_1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1431
CP000410.2	Genbank	CDS	1447304	1448257	.	-	0	ID=cds-ABJ53786.1;Parent=gene-SPD_1431;Dbxref=NCBI_GP:ABJ53786.1;Name=ABJ53786.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1606%3B equivalent gene in S.pneumoniae R6 %3D spr1459%3B identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=SPD_1431;product=glycosyl transferase%2C group 2 family protein;protein_id=ABJ53786.1;transl_table=11
CP000410.2	Genbank	gene	1448259	1449278	.	-	.	ID=gene-SPD_1432;Name=galE-1;gbkey=Gene;gene=galE-1;gene_biotype=protein_coding;locus_tag=SPD_1432
CP000410.2	Genbank	CDS	1448259	1449278	.	-	0	ID=cds-ABJ54632.1;Parent=gene-SPD_1432;Dbxref=NCBI_GP:ABJ54632.1;Name=ABJ54632.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1607%3B equivalent gene in S.pneumoniae R6 %3D spr1460%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179;gbkey=CDS;gene=galE-1;locus_tag=SPD_1432;product=UDP-glucose 4-epimerase;protein_id=ABJ54632.1;transl_table=11
CP000410.2	Genbank	gene	1449579	1450682	.	-	.	ID=gene-SPD_1433;Name=SPD_1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1433
CP000410.2	Genbank	CDS	1449579	1450682	.	-	0	ID=cds-ABJ54551.1;Parent=gene-SPD_1433;Dbxref=NCBI_GP:ABJ54551.1;Name=ABJ54551.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1608%3B equivalent gene in S.pneumoniae R6 %3D spr1461%3B identified by match to protein family HMM PF01266;gbkey=CDS;locus_tag=SPD_1433;product=FAD dependent oxidoreductase;protein_id=ABJ54551.1;transl_table=11
CP000410.2	Genbank	gene	1450699	1451496	.	-	.	ID=gene-SPD_1434;Name=SPD_1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1434
CP000410.2	Genbank	CDS	1450699	1451496	.	-	0	ID=cds-ABJ55327.1;Parent=gene-SPD_1434;Dbxref=NCBI_GP:ABJ55327.1;Name=ABJ55327.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1609%3B equivalent gene in S.pneumoniae R6 %3D spr1462%3B identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486;gbkey=CDS;locus_tag=SPD_1434;product=conserved hypothetical protein TIGR00486;protein_id=ABJ55327.1;transl_table=11
CP000410.2	Genbank	gene	1451483	1452160	.	-	.	ID=gene-SPD_1435;Name=SPD_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1435
CP000410.2	Genbank	CDS	1451483	1452160	.	-	0	ID=cds-ABJ53912.1;Parent=gene-SPD_1435;Dbxref=NCBI_GP:ABJ53912.1;Name=ABJ53912.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1610%3B equivalent gene in S.pneumoniae R6 %3D spr1463%3B identified by match to protein family HMM PF04816;gbkey=CDS;locus_tag=SPD_1435;product=hypothetical protein;protein_id=ABJ53912.1;transl_table=11
CP000410.2	Genbank	gene	1452262	1454598	.	-	.	ID=gene-SPD_1436;Name=SPD_1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1436
CP000410.2	Genbank	CDS	1452262	1454598	.	-	0	ID=cds-ABJ54233.1;Parent=gene-SPD_1436;Dbxref=NCBI_GP:ABJ54233.1;Name=ABJ54233.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1623%3B equivalent gene in S.pneumoniae R6 %3D spr1464%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494;gbkey=CDS;locus_tag=SPD_1436;product=cation-transporting ATPase%2C E1-E2 family protein;protein_id=ABJ54233.1;transl_table=11
CP000410.2	Genbank	gene	1454731	1455480	.	+	.	ID=gene-SPD_1437;Name=SPD_1437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1437
CP000410.2	Genbank	CDS	1454731	1455480	.	+	0	ID=cds-ABJ53774.1;Parent=gene-SPD_1437;Dbxref=NCBI_GP:ABJ53774.1;Name=ABJ53774.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1624%3B equivalent gene in S.pneumoniae R6 %3D spr1465%3B identified by match to protein family HMM PF01553;gbkey=CDS;locus_tag=SPD_1437;product=acyltransferase domain protein;protein_id=ABJ53774.1;transl_table=11
CP000410.2	Genbank	gene	1455773	1456387	.	-	.	ID=gene-SPD_1438;Name=SPD_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1438
CP000410.2	Genbank	CDS	1455773	1456387	.	-	0	ID=cds-ABJ54590.1;Parent=gene-SPD_1438;Dbxref=NCBI_GP:ABJ54590.1;Name=ABJ54590.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1625%3B equivalent gene in S.pneumoniae R6 %3D spr1466%3B identified by match to protein family HMM PF03596%3B match to protein family HMM TIGR00779;gbkey=CDS;locus_tag=SPD_1438;product=cadmium resistance transporter%2C putative;protein_id=ABJ54590.1;transl_table=11
CP000410.2	Genbank	gene	1457121	1457390	.	-	.	ID=gene-SPD_1439;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=SPD_1439
CP000410.2	Genbank	CDS	1457121	1457390	.	-	0	ID=cds-ABJ55446.1;Parent=gene-SPD_1439;Dbxref=NCBI_GP:ABJ55446.1;Name=ABJ55446.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1626%3B equivalent gene in S.pneumoniae R6 %3D spr1467%3B identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952;gbkey=CDS;gene=rpsO;locus_tag=SPD_1439;product=ribosomal protein S15;protein_id=ABJ55446.1;transl_table=11
CP000410.2	Genbank	gene	1457531	1458160	.	-	.	ID=gene-SPD_1440;Name=SPD_1440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1440
CP000410.2	Genbank	CDS	1457531	1458160	.	-	0	ID=cds-ABJ54381.1;Parent=gene-SPD_1440;Dbxref=NCBI_GP:ABJ54381.1;Name=ABJ54381.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1627%3B equivalent gene in S.pneumoniae R6 %3D spr1468;gbkey=CDS;locus_tag=SPD_1440;product=hypothetical protein;protein_id=ABJ54381.1;transl_table=11
CP000410.2	Genbank	gene	1458223	1458345	.	+	.	ID=gene-SPD_1441;Name=SPD_1441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1441
CP000410.2	Genbank	CDS	1458223	1458345	.	+	0	ID=cds-ABJ54652.1;Parent=gene-SPD_1441;Dbxref=NCBI_GP:ABJ54652.1;Name=ABJ54652.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1441;product=hypothetical protein;protein_id=ABJ54652.1;transl_table=11
CP000410.2	Genbank	gene	1458964	1459170	.	+	.	ID=gene-SPD_1442;Name=SPD_1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1442
CP000410.2	Genbank	CDS	1458964	1459170	.	+	0	ID=cds-ABJ53813.1;Parent=gene-SPD_1442;Dbxref=NCBI_GP:ABJ53813.1;Name=ABJ53813.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1630%3B equivalent gene in S.pneumoniae R6 %3D spr1470;gbkey=CDS;locus_tag=SPD_1442;product=hypothetical protein;protein_id=ABJ53813.1;transl_table=11
CP000410.2	Genbank	gene	1459177	1459353	.	+	.	ID=gene-SPD_1443;Name=SPD_1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1443
CP000410.2	Genbank	CDS	1459177	1459353	.	+	0	ID=cds-ABJ55367.1;Parent=gene-SPD_1443;Dbxref=NCBI_GP:ABJ55367.1;Name=ABJ55367.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1630%3B equivalent gene in S.pneumoniae R6 %3D spr1471;gbkey=CDS;locus_tag=SPD_1443;product=hypothetical protein;protein_id=ABJ55367.1;transl_table=11
CP000410.2	Genbank	gene	1459411	1461354	.	+	.	ID=gene-SPD_1444;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SPD_1444
CP000410.2	Genbank	CDS	1459411	1461354	.	+	0	ID=cds-ABJ53634.1;Parent=gene-SPD_1444;Dbxref=NCBI_GP:ABJ53634.1;Name=ABJ53634.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1631%3B equivalent gene in S.pneumoniae R6 %3D spr1472%3B identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418;gbkey=CDS;gene=thrS;locus_tag=SPD_1444;product=threonyl-tRNA synthetase;protein_id=ABJ53634.1;transl_table=11
CP000410.2	Genbank	gene	1461403	1462377	.	-	.	ID=gene-SPD_1445;Name=SPD_1445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1445
CP000410.2	Genbank	CDS	1461403	1462377	.	-	0	ID=cds-ABJ55164.1;Parent=gene-SPD_1445;Dbxref=NCBI_GP:ABJ55164.1;Name=ABJ55164.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1632%3B equivalent gene in S.pneumoniae R6 %3D spr1473%3B identified by match to protein family HMM PF02518;gbkey=CDS;locus_tag=SPD_1445;product=sensor histidine kinase;protein_id=ABJ55164.1;transl_table=11
CP000410.2	Genbank	gene	1462370	1463047	.	-	.	ID=gene-SPD_1446;Name=SPD_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1446
CP000410.2	Genbank	CDS	1462370	1463047	.	-	0	ID=cds-ABJ54426.1;Parent=gene-SPD_1446;Dbxref=NCBI_GP:ABJ54426.1;Name=ABJ54426.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1633%3B equivalent gene in S.pneumoniae R6 %3D spr1474%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=SPD_1446;product=DNA-binding response regulator;protein_id=ABJ54426.1;transl_table=11
CP000410.2	Genbank	gene	1463203	1464276	.	+	.	ID=gene-SPD_1447;Name=SPD_1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1447
CP000410.2	Genbank	CDS	1463203	1464276	.	+	0	ID=cds-ABJ55222.1;Parent=gene-SPD_1447;Dbxref=NCBI_GP:ABJ55222.1;Name=ABJ55222.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1634%3B equivalent gene in S.pneumoniae R6 %3D spr1475;gbkey=CDS;locus_tag=SPD_1447;product=hypothetical protein;protein_id=ABJ55222.1;transl_table=11
CP000410.2	Genbank	gene	1464738	1465175	.	-	.	ID=gene-SPD_1448;Name=SPD_1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1448
CP000410.2	Genbank	CDS	1464738	1465175	.	-	0	ID=cds-ABJ54121.1;Parent=gene-SPD_1448;Dbxref=NCBI_GP:ABJ54121.1;Name=ABJ54121.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1636%3B equivalent gene in S.pneumoniae R6 %3D spr1477%3B identified by match to protein family HMM PF02082;gbkey=CDS;locus_tag=SPD_1448;product=Rrf2 family protein;protein_id=ABJ54121.1;transl_table=11
CP000410.2	Genbank	gene	1465251	1466093	.	-	.	ID=gene-SPD_1449;Name=SPD_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1449
CP000410.2	Genbank	CDS	1465251	1466093	.	-	0	ID=cds-ABJ53984.1;Parent=gene-SPD_1449;Dbxref=NCBI_GP:ABJ53984.1;Name=ABJ53984.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1637%3B equivalent gene in S.pneumoniae R6 %3D spr1479%3B identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=SPD_1449;product=hypothetical protein;protein_id=ABJ53984.1;transl_table=11
CP000410.2	Genbank	gene	1466205	1466855	.	+	.	ID=gene-SPD_1450;Name=SPD_1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1450
CP000410.2	Genbank	CDS	1466205	1466855	.	+	0	ID=cds-ABJ55042.1;Parent=gene-SPD_1450;Dbxref=NCBI_GP:ABJ55042.1;Name=ABJ55042.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1638%3B equivalent gene in S.pneumoniae R6 %3D spr1480%3B identified by match to protein family HMM PF01047%3B match to protein family HMM PF01325%3B match to protein family HMM PF02742%3B match to protein family HMM PF04023;gbkey=CDS;locus_tag=SPD_1450;product=iron-dependent transcriptional regulator;protein_id=ABJ55042.1;transl_table=11
CP000410.2	Genbank	gene	1466836	1467006	.	+	.	ID=gene-SPD_1451;Name=SPD_1451;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1451
CP000410.2	Genbank	CDS	1466836	1467006	.	+	0	ID=cds-ABJ55440.1;Parent=gene-SPD_1451;Dbxref=NCBI_GP:ABJ55440.1;Name=ABJ55440.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1481;gbkey=CDS;locus_tag=SPD_1451;product=hypothetical protein;protein_id=ABJ55440.1;transl_table=11
CP000410.2	Genbank	gene	1467157	1467549	.	+	.	ID=gene-SPD_1452;Name=SPD_1452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1452
CP000410.2	Genbank	CDS	1467157	1467549	.	+	0	ID=cds-ABJ54403.1;Parent=gene-SPD_1452;Dbxref=NCBI_GP:ABJ54403.1;Name=ABJ54403.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1482;gbkey=CDS;locus_tag=SPD_1452;product=membrane protein%2C putative;protein_id=ABJ54403.1;transl_table=11
CP000410.2	Genbank	pseudogene	1467546	1467677	.	+	.	ID=gene-SPD_1453;Name=SPD_1453;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1640. This gene is not predicted in R6%3B however the R6 sequence is similar to the D39 gene%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1453;pseudo=true
CP000410.2	Genbank	gene	1467808	1468245	.	+	.	ID=gene-SPD_1454;Name=SPD_1454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1454
CP000410.2	Genbank	CDS	1467808	1468245	.	+	0	ID=cds-ABJ54654.1;Parent=gene-SPD_1454;Dbxref=NCBI_GP:ABJ54654.1;Name=ABJ54654.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1641%3B equivalent gene in S.pneumoniae R6 %3D spr1483;gbkey=CDS;locus_tag=SPD_1454;product=hypothetical protein;protein_id=ABJ54654.1;transl_table=11
CP000410.2	Genbank	gene	1469541	1469654	.	+	.	ID=gene-SPD_1455;Name=SPD_1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1455
CP000410.2	Genbank	CDS	1469541	1469654	.	+	0	ID=cds-ABJ53720.1;Parent=gene-SPD_1455;Dbxref=NCBI_GP:ABJ53720.1;Name=ABJ53720.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1642 This gene has a frameshift relative to the TIGR4 SP1642 gene.;gbkey=CDS;locus_tag=SPD_1455;product=hypothetical protein;protein_id=ABJ53720.1;transl_table=11
CP000410.2	Genbank	gene	1469794	1469955	.	+	.	ID=gene-SPD_1456;Name=SPD_1456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1456
CP000410.2	Genbank	CDS	1469794	1469955	.	+	0	ID=cds-ABJ54756.1;Parent=gene-SPD_1456;Dbxref=NCBI_GP:ABJ54756.1;Name=ABJ54756.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1643%3B equivalent gene in S.pneumoniae R6 %3D spr1485;gbkey=CDS;locus_tag=SPD_1456;product=hypothetical protein;protein_id=ABJ54756.1;transl_table=11
CP000410.2	Genbank	gene	1469994	1470437	.	-	.	ID=gene-SPD_1457;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=SPD_1457
CP000410.2	Genbank	CDS	1469994	1470437	.	-	0	ID=cds-ABJ53929.1;Parent=gene-SPD_1457;Dbxref=NCBI_GP:ABJ53929.1;Name=ABJ53929.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1644%3B equivalent gene in S.pneumoniae R6 %3D spr1486%3B identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256;gbkey=CDS;gene=dtd;locus_tag=SPD_1457;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=ABJ53929.1;transl_table=11
CP000410.2	Genbank	gene	1470467	1472689	.	-	.	ID=gene-SPD_1458;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=SPD_1458
CP000410.2	Genbank	CDS	1470467	1472689	.	-	0	ID=cds-ABJ55004.1;Parent=gene-SPD_1458;Dbxref=NCBI_GP:ABJ55004.1;Name=ABJ55004.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1645%3B equivalent gene in S.pneumoniae R6 %3D spr1487%3B identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;gene=relA;locus_tag=SPD_1458;product=GTP pyrophosphokinase;protein_id=ABJ55004.1;transl_table=11
CP000410.2	Genbank	gene	1473684	1474313	.	+	.	ID=gene-SPD_1459;Name=SPD_1459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1459
CP000410.2	Genbank	CDS	1473684	1474313	.	+	0	ID=cds-ABJ54099.1;Parent=gene-SPD_1459;Dbxref=NCBI_GP:ABJ54099.1;Name=ABJ54099.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1646%3B equivalent gene in S.pneumoniae R6 %3D spr1490%3B identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=SPD_1459;product=metallo-beta-lactamase superfamily protein;protein_id=ABJ54099.1;transl_table=11
CP000410.2	Genbank	gene	1474436	1476328	.	-	.	ID=gene-SPD_1460;Name=pepO;gbkey=Gene;gene=pepO;gene_biotype=protein_coding;locus_tag=SPD_1460
CP000410.2	Genbank	CDS	1474436	1476328	.	-	0	ID=cds-ABJ55398.1;Parent=gene-SPD_1460;Dbxref=NCBI_GP:ABJ55398.1;Name=ABJ55398.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1647%3B equivalent gene in S.pneumoniae R6 %3D spr1491%3B identified by match to protein family HMM PF01431%3B match to protein family HMM PF05649;gbkey=CDS;gene=pepO;locus_tag=SPD_1460;product=endopeptidase O;protein_id=ABJ55398.1;transl_table=11
CP000410.2	Genbank	gene	1476619	1477341	.	+	.	ID=gene-SPD_1461;Name=psaB;gbkey=Gene;gene=psaB;gene_biotype=protein_coding;locus_tag=SPD_1461
CP000410.2	Genbank	CDS	1476619	1477341	.	+	0	ID=cds-ABJ54191.1;Parent=gene-SPD_1461;Dbxref=NCBI_GP:ABJ54191.1;Name=ABJ54191.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1648%3B equivalent gene in S.pneumoniae R6 %3D spr1492%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=psaB;locus_tag=SPD_1461;product=manganese ABC transporter%2C ATP-binding protein;protein_id=ABJ54191.1;transl_table=11
CP000410.2	Genbank	gene	1477338	1478186	.	+	.	ID=gene-SPD_1462;Name=psaC;gbkey=Gene;gene=psaC;gene_biotype=protein_coding;locus_tag=SPD_1462
CP000410.2	Genbank	CDS	1477338	1478186	.	+	0	ID=cds-ABJ55067.1;Parent=gene-SPD_1462;Dbxref=NCBI_GP:ABJ55067.1;Name=ABJ55067.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1649%3B equivalent gene in S.pneumoniae R6 %3D spr1493%3B identified by match to protein family HMM PF00950;gbkey=CDS;gene=psaC;locus_tag=SPD_1462;product=manganese ABC transporter%2C permease protein%2C putative;protein_id=ABJ55067.1;transl_table=11
CP000410.2	Genbank	gene	1478218	1479147	.	+	.	ID=gene-SPD_1463;Name=SPD_1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1463
CP000410.2	Genbank	CDS	1478218	1479147	.	+	0	ID=cds-ABJ54269.1;Parent=gene-SPD_1463;Dbxref=NCBI_GP:ABJ54269.1;Name=ABJ54269.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1650%3B equivalent gene in S.pneumoniae R6 %3D spr1494%3B identified by match to protein family HMM PF01297;gbkey=CDS;locus_tag=SPD_1463;product=ABC transporter%2C substrate binding lipoprotein;protein_id=ABJ54269.1;transl_table=11
CP000410.2	Genbank	gene	1479270	1479761	.	+	.	ID=gene-SPD_1464;Name=psaD;gbkey=Gene;gene=psaD;gene_biotype=protein_coding;locus_tag=SPD_1464
CP000410.2	Genbank	CDS	1479270	1479761	.	+	0	ID=cds-ABJ55447.1;Parent=gene-SPD_1464;Dbxref=NCBI_GP:ABJ55447.1;Name=ABJ55447.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1651%3B equivalent gene in S.pneumoniae R6 %3D spr1495%3B identified by match to protein family HMM PF00578;gbkey=CDS;gene=psaD;locus_tag=SPD_1464;product=thiol peroxidase;protein_id=ABJ55447.1;transl_table=11
CP000410.2	Genbank	gene	1479857	1482565	.	-	.	ID=gene-SPD_1465;Name=SPD_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1465
CP000410.2	Genbank	CDS	1479857	1482565	.	-	0	ID=cds-ABJ54342.1;Parent=gene-SPD_1465;Dbxref=NCBI_GP:ABJ54342.1;Name=ABJ54342.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1652%3B equivalent gene in S.pneumoniae R6 %3D spr1496%3B identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=SPD_1465;product=efflux ABC transporter%2C permease protein;protein_id=ABJ54342.1;transl_table=11
CP000410.2	Genbank	gene	1482567	1483268	.	-	.	ID=gene-SPD_1466;Name=SPD_1466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1466
CP000410.2	Genbank	CDS	1482567	1483268	.	-	0	ID=cds-ABJ54712.1;Parent=gene-SPD_1466;Dbxref=NCBI_GP:ABJ54712.1;Name=ABJ54712.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1653%3B equivalent gene in S.pneumoniae R6 %3D spr1497%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1466;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54712.1;transl_table=11
CP000410.2	Genbank	gene	1483518	1485929	.	-	.	ID=gene-SPD_1467;Name=SPD_1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1467
CP000410.2	Genbank	CDS	1483518	1485929	.	-	0	ID=cds-ABJ53628.1;Parent=gene-SPD_1467;Dbxref=NCBI_GP:ABJ53628.1;Name=ABJ53628.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1654%3B equivalent gene in S.pneumoniae R6 %3D spr1498;gbkey=CDS;locus_tag=SPD_1467;product=hypothetical protein;protein_id=ABJ53628.1;transl_table=11
CP000410.2	Genbank	gene	1485982	1486674	.	-	.	ID=gene-SPD_1468;Name=SPD_1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1468
CP000410.2	Genbank	CDS	1485982	1486674	.	-	0	ID=cds-ABJ54957.1;Parent=gene-SPD_1468;Dbxref=NCBI_GP:ABJ54957.1;Name=ABJ54957.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1655%3B equivalent gene in S.pneumoniae R6 %3D spr1499%3B identified by match to protein family HMM PF00300%3B match to protein family HMM TIGR01258;gbkey=CDS;locus_tag=SPD_1468;product=phosphoglycerate mutase;protein_id=ABJ54957.1;transl_table=11
CP000410.2	Genbank	gene	1486725	1486913	.	-	.	ID=gene-SPD_1469;Name=SPD_1469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1469
CP000410.2	Genbank	CDS	1486725	1486913	.	-	0	ID=cds-ABJ53938.1;Parent=gene-SPD_1469;Dbxref=NCBI_GP:ABJ53938.1;Name=ABJ53938.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1656%3B equivalent gene in S.pneumoniae R6 %3D spr1500;gbkey=CDS;locus_tag=SPD_1469;product=hypothetical protein;protein_id=ABJ53938.1;transl_table=11
CP000410.2	Genbank	gene	1487289	1487429	.	-	.	ID=gene-SPD_1470;Name=SPD_1470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1470
CP000410.2	Genbank	CDS	1487289	1487429	.	-	0	ID=cds-ABJ54297.1;Parent=gene-SPD_1470;Dbxref=NCBI_GP:ABJ54297.1;Name=ABJ54297.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1658%3B equivalent gene in S.pneumoniae R6 %3D spr1501;gbkey=CDS;locus_tag=SPD_1470;product=hypothetical protein;protein_id=ABJ54297.1;transl_table=11
CP000410.2	Genbank	gene	1487433	1487549	.	-	.	ID=gene-SPD_1471;Name=SPD_1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1471
CP000410.2	Genbank	CDS	1487433	1487549	.	-	0	ID=cds-ABJ55499.1;Parent=gene-SPD_1471;Dbxref=NCBI_GP:ABJ55499.1;Name=ABJ55499.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1658;gbkey=CDS;locus_tag=SPD_1471;product=hypothetical protein;protein_id=ABJ55499.1;transl_table=11
CP000410.2	Genbank	gene	1487997	1490789	.	-	.	ID=gene-SPD_1472;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SPD_1472
CP000410.2	Genbank	CDS	1487997	1490789	.	-	0	ID=cds-ABJ54238.1;Parent=gene-SPD_1472;Dbxref=NCBI_GP:ABJ54238.1;Name=ABJ54238.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1659%3B equivalent gene in S.pneumoniae R6 %3D spr1502%3B identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM TIGR00392;gbkey=CDS;gene=ileS;locus_tag=SPD_1472;product=isoleucyl-tRNA synthetase;protein_id=ABJ54238.1;transl_table=11
CP000410.2	Genbank	gene	1491042	1491158	.	-	.	ID=gene-SPD_1473;Name=SPD_1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1473
CP000410.2	Genbank	CDS	1491042	1491158	.	-	0	ID=cds-ABJ55075.1;Parent=gene-SPD_1473;Dbxref=NCBI_GP:ABJ55075.1;Name=ABJ55075.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1473;product=hypothetical protein;protein_id=ABJ55075.1;transl_table=11
CP000410.2	Genbank	gene	1491137	1491925	.	-	.	ID=gene-SPD_1474;Name=divIVA;gbkey=Gene;gene=divIVA;gene_biotype=protein_coding;locus_tag=SPD_1474
CP000410.2	Genbank	CDS	1491137	1491925	.	-	0	ID=cds-ABJ54229.1;Parent=gene-SPD_1474;Dbxref=NCBI_GP:ABJ54229.1;Name=ABJ54229.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1661%3B equivalent gene in S.pneumoniae R6 %3D spr1505%3B identified by match to protein family HMM PF05103;gbkey=CDS;gene=divIVA;locus_tag=SPD_1474;product=cell division protein DivIVA;protein_id=ABJ54229.1;transl_table=11
CP000410.2	Genbank	gene	1491934	1492719	.	-	.	ID=gene-SPD_1475;Name=ylmH;gbkey=Gene;gene=ylmH;gene_biotype=protein_coding;locus_tag=SPD_1475
CP000410.2	Genbank	CDS	1491934	1492719	.	-	0	ID=cds-ABJ55178.1;Parent=gene-SPD_1475;Dbxref=NCBI_GP:ABJ55178.1;Name=ABJ55178.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1662%3B equivalent gene in S.pneumoniae R6 %3D spr1506%3B identified by match to protein family HMM PF01479;gbkey=CDS;gene=ylmH;locus_tag=SPD_1475;product=YlmH protein;protein_id=ABJ55178.1;transl_table=11
CP000410.2	Genbank	gene	1492716	1492979	.	-	.	ID=gene-SPD_1476;Name=ylmG;gbkey=Gene;gene=ylmG;gene_biotype=protein_coding;locus_tag=SPD_1476
CP000410.2	Genbank	CDS	1492716	1492979	.	-	0	ID=cds-ABJ54986.1;Parent=gene-SPD_1476;Dbxref=NCBI_GP:ABJ54986.1;Name=ABJ54986.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1663%3B equivalent gene in S.pneumoniae R6 %3D spr1507%3B identified by match to protein family HMM PF02325;gbkey=CDS;gene=ylmG;locus_tag=SPD_1476;product=YlmG protein;protein_id=ABJ54986.1;transl_table=11
CP000410.2	Genbank	gene	1492979	1493518	.	-	.	ID=gene-SPD_1477;Name=ylmF;gbkey=Gene;gene=ylmF;gene_biotype=protein_coding;locus_tag=SPD_1477
CP000410.2	Genbank	CDS	1492979	1493518	.	-	0	ID=cds-ABJ53822.1;Parent=gene-SPD_1477;Dbxref=NCBI_GP:ABJ53822.1;Name=ABJ53822.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1664%3B equivalent gene in S.pneumoniae R6 %3D spr1508%3B identified by match to protein family HMM PF04472;gbkey=CDS;gene=ylmF;locus_tag=SPD_1477;product=YlmF protein;protein_id=ABJ53822.1;transl_table=11
CP000410.2	Genbank	gene	1493528	1494199	.	-	.	ID=gene-SPD_1478;Name=ylmE;gbkey=Gene;gene=ylmE;gene_biotype=protein_coding;locus_tag=SPD_1478
CP000410.2	Genbank	CDS	1493528	1494199	.	-	0	ID=cds-ABJ54666.1;Parent=gene-SPD_1478;Dbxref=NCBI_GP:ABJ54666.1;Name=ABJ54666.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1665%3B equivalent gene in S.pneumoniae R6 %3D spr1509%3B identified by match to protein family HMM TIGR00044;gbkey=CDS;gene=ylmE;locus_tag=SPD_1478;product=YlmE protein;protein_id=ABJ54666.1;transl_table=11
CP000410.2	Genbank	gene	1494204	1495463	.	-	.	ID=gene-SPD_1479;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=SPD_1479
CP000410.2	Genbank	CDS	1494204	1495463	.	-	0	ID=cds-ABJ54579.1;Parent=gene-SPD_1479;Dbxref=NCBI_GP:ABJ54579.1;Name=ABJ54579.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1666%3B equivalent gene in S.pneumoniae R6 %3D spr1510%3B identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065;gbkey=CDS;gene=ftsZ;locus_tag=SPD_1479;product=cell division protein FtsZ;protein_id=ABJ54579.1;transl_table=11
CP000410.2	Genbank	gene	1495480	1496853	.	-	.	ID=gene-SPD_1480;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SPD_1480
CP000410.2	Genbank	CDS	1495480	1496853	.	-	0	ID=cds-ABJ55292.1;Parent=gene-SPD_1480;Dbxref=NCBI_GP:ABJ55292.1;Name=ABJ55292.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1667%3B equivalent gene in S.pneumoniae R6 %3D spr1511%3B identified by match to protein family HMM PF02491%3B match to protein family HMM TIGR01174;gbkey=CDS;gene=ftsA;locus_tag=SPD_1480;product=cell division protein FtsA;protein_id=ABJ55292.1;transl_table=11
CP000410.2	Genbank	gene	1497072	1497776	.	-	.	ID=gene-SPD_1481;Name=SPD_1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1481
CP000410.2	Genbank	CDS	1497072	1497776	.	-	0	ID=cds-ABJ53987.1;Parent=gene-SPD_1481;Dbxref=NCBI_GP:ABJ53987.1;Name=ABJ53987.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1668%3B equivalent gene in S.pneumoniae R6 %3D spr1512%3B identified by match to protein family HMM TIGR02206;gbkey=CDS;locus_tag=SPD_1481;product=membrane protein%2C putative;protein_id=ABJ53987.1;transl_table=11
CP000410.2	Genbank	gene	1497867	1498478	.	-	.	ID=gene-SPD_1482;Name=SPD_1482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1482
CP000410.2	Genbank	CDS	1497867	1498478	.	-	0	ID=cds-ABJ54847.1;Parent=gene-SPD_1482;Dbxref=NCBI_GP:ABJ54847.1;Name=ABJ54847.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1669%3B equivalent gene in S.pneumoniae R6 %3D spr1513%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_1482;product=MutT/nudix family protein;protein_id=ABJ54847.1;transl_table=11
CP000410.2	Genbank	gene	1498465	1499838	.	-	.	ID=gene-SPD_1483;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SPD_1483
CP000410.2	Genbank	CDS	1498465	1499838	.	-	0	ID=cds-ABJ54053.1;Parent=gene-SPD_1483;Dbxref=NCBI_GP:ABJ54053.1;Name=ABJ54053.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1670%3B equivalent gene in S.pneumoniae R6 %3D spr1514%3B identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM TIGR01143;gbkey=CDS;gene=murF;locus_tag=SPD_1483;product=UDP-N-acetylmuramoylalanyl-D-glutamyl-2%2C 6-diaminopimelate--D-alanyl-D-alanyl ligase;protein_id=ABJ54053.1;transl_table=11
CP000410.2	Genbank	gene	1499922	1500965	.	-	.	ID=gene-SPD_1484;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=SPD_1484
CP000410.2	Genbank	CDS	1499922	1500965	.	-	0	ID=cds-ABJ55128.1;Parent=gene-SPD_1484;Dbxref=NCBI_GP:ABJ55128.1;Name=ABJ55128.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1671%3B equivalent gene in S.pneumoniae R6 %3D spr1515%3B identified by match to protein family HMM PF01820%3B match to protein family HMM PF02222%3B match to protein family HMM PF07478%3B match to protein family HMM TIGR01205;gbkey=CDS;gene=ddlA;locus_tag=SPD_1484;product=D-alanine-D-alanine ligase;protein_id=ABJ55128.1;transl_table=11
CP000410.2	Genbank	gene	1501141	1501737	.	-	.	ID=gene-SPD_1485;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SPD_1485
CP000410.2	Genbank	CDS	1501141	1501737	.	-	0	ID=cds-ABJ54303.1;Parent=gene-SPD_1485;Dbxref=NCBI_GP:ABJ54303.1;Name=ABJ54303.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1672%3B equivalent gene in S.pneumoniae R6 %3D spr1516%3B identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615;gbkey=CDS;gene=recR;locus_tag=SPD_1485;product=recombination protein RecR;protein_id=ABJ54303.1;transl_table=11
CP000410.2	Genbank	gene	1501748	1503805	.	-	.	ID=gene-SPD_1486;Name=penA;gbkey=Gene;gene=penA;gene_biotype=protein_coding;locus_tag=SPD_1486
CP000410.2	Genbank	CDS	1501748	1503805	.	-	0	ID=cds-ABJ55452.1;Parent=gene-SPD_1486;Dbxref=NCBI_GP:ABJ55452.1;Name=ABJ55452.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1673%3B equivalent gene in S.pneumoniae R6 %3D spr1517%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717;gbkey=CDS;gene=penA;locus_tag=SPD_1486;product=penicillin-binding protein 2B;protein_id=ABJ55452.1;transl_table=11
CP000410.2	Genbank	gene	1504005	1504856	.	+	.	ID=gene-SPD_1487;Name=SPD_1487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1487
CP000410.2	Genbank	CDS	1504005	1504856	.	+	0	ID=cds-ABJ54536.1;Parent=gene-SPD_1487;Dbxref=NCBI_GP:ABJ54536.1;Name=ABJ54536.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1674%3B equivalent gene in S.pneumoniae R6 %3D spr1518%3B identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418;gbkey=CDS;locus_tag=SPD_1487;product=phosphosugar-binding transcriptional regulator%2C putative;protein_id=ABJ54536.1;transl_table=11
CP000410.2	Genbank	gene	1504872	1505756	.	-	.	ID=gene-SPD_1488;Name=SPD_1488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1488
CP000410.2	Genbank	CDS	1504872	1505756	.	-	0	ID=cds-ABJ53770.1;Parent=gene-SPD_1488;Dbxref=NCBI_GP:ABJ53770.1;Name=ABJ53770.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1675%3B equivalent gene in S.pneumoniae R6 %3D spr1519%3B identified by match to protein family HMM PF00480;gbkey=CDS;locus_tag=SPD_1488;product=ROK family protein;protein_id=ABJ53770.1;transl_table=11
CP000410.2	Genbank	gene	1505774	1506505	.	-	.	ID=gene-SPD_1489;Name=SPD_1489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1489
CP000410.2	Genbank	CDS	1505774	1506505	.	-	0	ID=cds-ABJ54848.1;Parent=gene-SPD_1489;Dbxref=NCBI_GP:ABJ54848.1;Name=ABJ54848.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1676%3B equivalent gene in S.pneumoniae R6 %3D spr1520%3B identified by match to protein family HMM PF00701;gbkey=CDS;locus_tag=SPD_1489;product=N-acetylneuraminate lyase%2C putative;protein_id=ABJ54848.1;transl_table=11
CP000410.2	Genbank	gene	1506874	1507338	.	-	.	ID=gene-SPD_1490;Name=SPD_1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1490
CP000410.2	Genbank	CDS	1506874	1507338	.	-	0	ID=cds-ABJ53616.1;Parent=gene-SPD_1490;Dbxref=NCBI_GP:ABJ53616.1;Name=ABJ53616.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1677%3B equivalent gene in S.pneumoniae R6 %3D spr1522%3B identified by match to protein family HMM PF04854;gbkey=CDS;locus_tag=SPD_1490;product=hypothetical protein;protein_id=ABJ53616.1;transl_table=11
CP000410.2	Genbank	gene	1507625	1507969	.	-	.	ID=gene-SPD_1491;Name=SPD_1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1491
CP000410.2	Genbank	CDS	1507625	1507969	.	-	0	ID=cds-ABJ54274.1;Parent=gene-SPD_1491;Dbxref=NCBI_GP:ABJ54274.1;Name=ABJ54274.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1523;gbkey=CDS;locus_tag=SPD_1491;product=hypothetical protein;protein_id=ABJ54274.1;transl_table=11
CP000410.2	Genbank	gene	1508066	1508518	.	-	.	ID=gene-SPD_1492;Name=SPD_1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1492
CP000410.2	Genbank	CDS	1508066	1508518	.	-	0	ID=cds-ABJ53750.1;Parent=gene-SPD_1492;Dbxref=NCBI_GP:ABJ53750.1;Name=ABJ53750.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1680%3B equivalent gene in S.pneumoniae R6 %3D spr1524%3B identified by match to protein family HMM PF04074%3B match to protein family HMM TIGR00022;gbkey=CDS;locus_tag=SPD_1492;product=hypothetical protein;protein_id=ABJ53750.1;transl_table=11
CP000410.2	Genbank	gene	1508791	1509630	.	-	.	ID=gene-SPD_1493;Name=SPD_1493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1493
CP000410.2	Genbank	CDS	1508791	1509630	.	-	0	ID=cds-ABJ54339.1;Parent=gene-SPD_1493;Dbxref=NCBI_GP:ABJ54339.1;Name=ABJ54339.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1681%3B equivalent gene in S.pneumoniae R6 %3D spr1525%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1493;product=sugar ABC transporter%2C permease protein;protein_id=ABJ54339.1;transl_table=11
CP000410.2	Genbank	gene	1509646	1510533	.	-	.	ID=gene-SPD_1494;Name=SPD_1494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1494
CP000410.2	Genbank	CDS	1509646	1510533	.	-	0	ID=cds-ABJ55050.1;Parent=gene-SPD_1494;Dbxref=NCBI_GP:ABJ55050.1;Name=ABJ55050.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1682%3B equivalent gene in S.pneumoniae R6 %3D spr1526%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1494;product=sugar ABC transporter%2C permease protein;protein_id=ABJ55050.1;transl_table=11
CP000410.2	Genbank	gene	1510764	1512092	.	-	.	ID=gene-SPD_1495;Name=SPD_1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1495
CP000410.2	Genbank	CDS	1510764	1512092	.	-	0	ID=cds-ABJ53701.1;Parent=gene-SPD_1495;Dbxref=NCBI_GP:ABJ53701.1;Name=ABJ53701.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1683%3B equivalent gene in S.pneumoniae R6 %3D spr1527%3B identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=SPD_1495;product=sugar ABC transporter%2C sugar-binding protein;protein_id=ABJ53701.1;transl_table=11
CP000410.2	Genbank	gene	1512217	1513734	.	-	.	ID=gene-SPD_1496;Name=SPD_1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1496
CP000410.2	Genbank	CDS	1512217	1513734	.	-	0	ID=cds-ABJ55232.1;Parent=gene-SPD_1496;Dbxref=NCBI_GP:ABJ55232.1;Name=ABJ55232.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1684%3B equivalent gene in S.pneumoniae R6 %3D spr1528%3B identified by match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826;gbkey=CDS;locus_tag=SPD_1496;product=PTS system%2C IIBC components;protein_id=ABJ55232.1;transl_table=11
CP000410.2	Genbank	gene	1513753	1514451	.	-	.	ID=gene-SPD_1497;Name=nanE-1;gbkey=Gene;gene=nanE-1;gene_biotype=protein_coding;locus_tag=SPD_1497
CP000410.2	Genbank	CDS	1513753	1514451	.	-	0	ID=cds-ABJ54183.1;Parent=gene-SPD_1497;Dbxref=NCBI_GP:ABJ54183.1;Name=ABJ54183.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1685%3B equivalent gene in S.pneumoniae R6 %3D spr1529%3B identified by match to protein family HMM PF04131;gbkey=CDS;gene=nanE-1;locus_tag=SPD_1497;product=N-acetylmannosamine-6-phosphate 2-epimerase 2%2C putative;protein_id=ABJ54183.1;transl_table=11
CP000410.2	Genbank	gene	1514631	1515734	.	-	.	ID=gene-SPD_1498;Name=SPD_1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1498
CP000410.2	Genbank	CDS	1514631	1515734	.	-	0	ID=cds-ABJ54404.1;Parent=gene-SPD_1498;Dbxref=NCBI_GP:ABJ54404.1;Name=ABJ54404.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1686%3B equivalent gene in S.pneumoniae R6 %3D spr1530%3B identified by match to protein family HMM PF01118%3B match to protein family HMM PF01408%3B match to protein family HMM PF02894%3B match to protein family HMM PF03447;gbkey=CDS;locus_tag=SPD_1498;product=putative oxidoreductase;protein_id=ABJ54404.1;transl_table=11
CP000410.2	Genbank	gene	1515746	1517839	.	-	.	ID=gene-SPD_1499;Name=nanB;gbkey=Gene;gene=nanB;gene_biotype=protein_coding;locus_tag=SPD_1499
CP000410.2	Genbank	CDS	1515746	1517839	.	-	0	ID=cds-ABJ55283.1;Parent=gene-SPD_1499;Dbxref=NCBI_GP:ABJ55283.1;Name=ABJ55283.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1687%3B equivalent gene in S.pneumoniae R6 %3D spr1531%3B identified by match to protein family HMM PF02012%3B match to protein family HMM PF02973;gbkey=CDS;gene=nanB;locus_tag=SPD_1499;product=sialidase B precursor;protein_id=ABJ55283.1;transl_table=11
CP000410.2	Genbank	gene	1517857	1518690	.	-	.	ID=gene-SPD_1500;Name=SPD_1500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1500
CP000410.2	Genbank	CDS	1517857	1518690	.	-	0	ID=cds-ABJ54633.1;Parent=gene-SPD_1500;Dbxref=NCBI_GP:ABJ54633.1;Name=ABJ54633.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1688%3B equivalent gene in S.pneumoniae R6 %3D spr1532%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1500;product=ABC transporter%2C permease protein;protein_id=ABJ54633.1;transl_table=11
CP000410.2	Genbank	gene	1518690	1519574	.	-	.	ID=gene-SPD_1501;Name=SPD_1501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1501
CP000410.2	Genbank	CDS	1518690	1519574	.	-	0	ID=cds-ABJ53956.1;Parent=gene-SPD_1501;Dbxref=NCBI_GP:ABJ53956.1;Name=ABJ53956.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1689%3B equivalent gene in S.pneumoniae R6 %3D spr1533%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1501;product=ABC transporter%2C permease protein;protein_id=ABJ53956.1;transl_table=11
CP000410.2	Genbank	gene	1519653	1520990	.	-	.	ID=gene-SPD_1502;Name=SPD_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1502
CP000410.2	Genbank	CDS	1519653	1520990	.	-	0	ID=cds-ABJ54867.1;Parent=gene-SPD_1502;Dbxref=NCBI_GP:ABJ54867.1;Name=ABJ54867.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1690%3B equivalent gene in S.pneumoniae R6 %3D spr1534%3B identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=SPD_1502;product=ABC transporter%2C substrate-binding protein;protein_id=ABJ54867.1;transl_table=11
CP000410.2	Genbank	gene	1521009	1521461	.	-	.	ID=gene-SPD_1503;Name=SPD_1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1503
CP000410.2	Genbank	CDS	1521009	1521461	.	-	0	ID=cds-ABJ53887.1;Parent=gene-SPD_1503;Dbxref=NCBI_GP:ABJ53887.1;Name=ABJ53887.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1691%3B equivalent gene in S.pneumoniae R6 %3D spr1535%3B identified by match to protein family HMM PF04074%3B match to protein family HMM TIGR00022;gbkey=CDS;locus_tag=SPD_1503;product=hypothetical protein;protein_id=ABJ53887.1;transl_table=11
CP000410.2	Genbank	gene	1522476	1525469	.	-	.	ID=gene-SPD_1504;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=SPD_1504
CP000410.2	Genbank	CDS	1522476	1525469	.	-	0	ID=cds-ABJ55437.1;Parent=gene-SPD_1504;Dbxref=NCBI_GP:ABJ55437.1;Name=ABJ55437.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1536%3B identified by match to protein family HMM PF02012%3B match to protein family HMM PF02973%3B match to protein family HMM TIGR01167;gbkey=CDS;gene=nanA;locus_tag=SPD_1504;product=sialidase A precursor;protein_id=ABJ55437.1;transl_table=11
CP000410.2	Genbank	gene	1525826	1526053	.	-	.	ID=gene-SPD_1505;Name=SPD_1505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1505
CP000410.2	Genbank	CDS	1525826	1526053	.	-	0	ID=cds-ABJ53834.1;Parent=gene-SPD_1505;Dbxref=NCBI_GP:ABJ53834.1;Name=ABJ53834.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1694%3B equivalent gene in S.pneumoniae R6 %3D spr1537;gbkey=CDS;locus_tag=SPD_1505;product=hypothetical protein;protein_id=ABJ53834.1;transl_table=11
CP000410.2	Genbank	gene	1526948	1527928	.	-	.	ID=gene-SPD_1506;Name=SPD_1506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1506
CP000410.2	Genbank	CDS	1526948	1527928	.	-	0	ID=cds-ABJ55220.1;Parent=gene-SPD_1506;Dbxref=NCBI_GP:ABJ55220.1;Name=ABJ55220.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1695%3B equivalent gene in S.pneumoniae R6 %3D spr1538%3B identified by match to protein family HMM PF05448;gbkey=CDS;locus_tag=SPD_1506;product=acetyl xylan esterase%2C putative;protein_id=ABJ55220.1;transl_table=11
CP000410.2	Genbank	gene	1528244	1530259	.	-	.	ID=gene-SPD_1507;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=SPD_1507
CP000410.2	Genbank	CDS	1528244	1530259	.	-	0	ID=cds-ABJ54376.1;Parent=gene-SPD_1507;Dbxref=NCBI_GP:ABJ54376.1;Name=ABJ54376.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1697%3B equivalent gene in S.pneumoniae R6 %3D spr1539%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00643;gbkey=CDS;gene=recG;locus_tag=SPD_1507;product=ATP-dependent DNA helicase RecG;protein_id=ABJ54376.1;transl_table=11
CP000410.2	Genbank	gene	1530278	1531381	.	-	.	ID=gene-SPD_1508;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=SPD_1508
CP000410.2	Genbank	CDS	1530278	1531381	.	-	0	ID=cds-ABJ54061.1;Parent=gene-SPD_1508;Dbxref=NCBI_GP:ABJ54061.1;Name=ABJ54061.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1698%3B equivalent gene in S.pneumoniae R6 %3D spr1540%3B identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492;gbkey=CDS;gene=alr;locus_tag=SPD_1508;product=alanine racemase;protein_id=ABJ54061.1;transl_table=11
CP000410.2	Genbank	gene	1531371	1531733	.	-	.	ID=gene-SPD_1509;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SPD_1509
CP000410.2	Genbank	CDS	1531371	1531733	.	-	0	ID=cds-ABJ54171.1;Parent=gene-SPD_1509;Dbxref=NCBI_GP:ABJ54171.1;Name=ABJ54171.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1699%3B equivalent gene in S.pneumoniae R6 %3D spr1541%3B identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556;gbkey=CDS;gene=acpS;locus_tag=SPD_1509;product=holo-(acyl-carrier-protein) synthase;protein_id=ABJ54171.1;transl_table=11
CP000410.2	Genbank	gene	1531778	1532809	.	-	.	ID=gene-SPD_1510;Name=SPD_1510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1510
CP000410.2	Genbank	CDS	1531778	1532809	.	-	0	ID=cds-ABJ54477.1;Parent=gene-SPD_1510;Dbxref=NCBI_GP:ABJ54477.1;Name=ABJ54477.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1700%3B equivalent gene in S.pneumoniae R6 %3D spr1542%3B identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR00034;gbkey=CDS;locus_tag=SPD_1510;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=ABJ54477.1;transl_table=11
CP000410.2	Genbank	gene	1532811	1533842	.	-	.	ID=gene-SPD_1511;Name=SPD_1511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1511
CP000410.2	Genbank	CDS	1532811	1533842	.	-	0	ID=cds-ABJ55463.1;Parent=gene-SPD_1511;Dbxref=NCBI_GP:ABJ55463.1;Name=ABJ55463.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1701%3B equivalent gene in S.pneumoniae R6 %3D spr1543%3B identified by match to protein family HMM PF00793;gbkey=CDS;locus_tag=SPD_1511;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=ABJ55463.1;transl_table=11
CP000410.2	Genbank	gene	1533923	1536436	.	-	.	ID=gene-SPD_1512;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=SPD_1512
CP000410.2	Genbank	CDS	1533923	1536436	.	-	0	ID=cds-ABJ53706.1;Parent=gene-SPD_1512;Dbxref=NCBI_GP:ABJ53706.1;Name=ABJ53706.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1702%3B equivalent gene in S.pneumoniae R6 %3D spr1544%3B identified by match to protein family HMM PF00271%3B match to protein family HMM PF01043%3B match to protein family HMM PF02810%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963;gbkey=CDS;gene=secA;locus_tag=SPD_1512;product=preprotein translocase%2C SecA subunit;protein_id=ABJ53706.1;transl_table=11
CP000410.2	Genbank	pseudogene	1536582	1536871	.	-	.	ID=gene-SPD_1513;Name=SPD_1513;Note=equivalent gene in S.pneumoniae R6 %3D spr1545. The R6 version has the same mutation%3B conserved hypothetical protein%2C authentic frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1513;pseudo=true
CP000410.2	Genbank	gene	1536882	1537532	.	-	.	ID=gene-SPD_1514;Name=SPD_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1514
CP000410.2	Genbank	CDS	1536882	1537532	.	-	0	ID=cds-ABJ54612.1;Parent=gene-SPD_1514;Dbxref=NCBI_GP:ABJ54612.1;Name=ABJ54612.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1704%3B equivalent gene in S.pneumoniae R6 %3D spr1546%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1514;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54612.1;transl_table=11
CP000410.2	Genbank	gene	1537536	1538111	.	-	.	ID=gene-SPD_1515;Name=SPD_1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1515
CP000410.2	Genbank	CDS	1537536	1538111	.	-	0	ID=cds-ABJ53978.1;Parent=gene-SPD_1515;Dbxref=NCBI_GP:ABJ53978.1;Name=ABJ53978.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1705%3B equivalent gene in S.pneumoniae R6 %3D spr1547;gbkey=CDS;locus_tag=SPD_1515;product=membrane protein%2C putative;protein_id=ABJ53978.1;transl_table=11
CP000410.2	Genbank	gene	1538170	1538961	.	-	.	ID=gene-SPD_1516;Name=SPD_1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1516
CP000410.2	Genbank	CDS	1538170	1538961	.	-	0	ID=cds-ABJ54904.1;Parent=gene-SPD_1516;Dbxref=NCBI_GP:ABJ54904.1;Name=ABJ54904.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1706%3B equivalent gene in S.pneumoniae R6 %3D spr1548;gbkey=CDS;locus_tag=SPD_1516;product=membrane protein%2C putative;protein_id=ABJ54904.1;transl_table=11
CP000410.2	Genbank	gene	1538983	1539375	.	-	.	ID=gene-SPD_1517;Name=SPD_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1517
CP000410.2	Genbank	CDS	1538983	1539375	.	-	0	ID=cds-ABJ55265.1;Parent=gene-SPD_1517;Dbxref=NCBI_GP:ABJ55265.1;Name=ABJ55265.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1549;gbkey=CDS;locus_tag=SPD_1517;product=hypothetical protein;protein_id=ABJ55265.1;transl_table=11
CP000410.2	Genbank	gene	1539702	1540553	.	+	.	ID=gene-SPD_1518;Name=SPD_1518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1518
CP000410.2	Genbank	CDS	1539702	1540553	.	+	0	ID=cds-ABJ55270.1;Parent=gene-SPD_1518;Dbxref=NCBI_GP:ABJ55270.1;Name=ABJ55270.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1550%3B identified by match to protein family HMM PF01381%3B match to protein family HMM TIGR01716;gbkey=CDS;locus_tag=SPD_1518;product=transcriptional activator%2C Rgg/GadR/MutR family protein;protein_id=ABJ55270.1;transl_table=11
CP000410.2	Genbank	gene	1541689	1542999	.	-	.	ID=gene-SPD_1519;Name=SPD_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1519
CP000410.2	Genbank	CDS	1541689	1542999	.	-	0	ID=cds-ABJ54175.1;Parent=gene-SPD_1519;Dbxref=NCBI_GP:ABJ54175.1;Name=ABJ54175.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1709%3B equivalent gene in S.pneumoniae R6 %3D spr1553%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00650;gbkey=CDS;locus_tag=SPD_1519;product=phosphoglycerate dehydrogenase-related protein;protein_id=ABJ54175.1;transl_table=11
CP000410.2	Genbank	gene	1543013	1543726	.	-	.	ID=gene-SPD_1520;Name=SPD_1520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1520
CP000410.2	Genbank	CDS	1543013	1543726	.	-	0	ID=cds-ABJ55371.1;Parent=gene-SPD_1520;Dbxref=NCBI_GP:ABJ55371.1;Name=ABJ55371.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1710%3B equivalent gene in S.pneumoniae R6 %3D spr1554%3B identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=SPD_1520;product=nitroreductase family protein;protein_id=ABJ55371.1;transl_table=11
CP000410.2	Genbank	gene	1543723	1544619	.	-	.	ID=gene-SPD_1521;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=SPD_1521
CP000410.2	Genbank	CDS	1543723	1544619	.	-	0	ID=cds-ABJ54502.1;Parent=gene-SPD_1521;Dbxref=NCBI_GP:ABJ54502.1;Name=ABJ54502.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1555%3B identified by match to protein family HMM PF07319;gbkey=CDS;gene=dnaI;locus_tag=SPD_1521;product=primosomal protein DnaI;protein_id=ABJ54502.1;transl_table=11
CP000410.2	Genbank	gene	1544620	1545789	.	-	.	ID=gene-SPD_1522;Name=SPD_1522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1522
CP000410.2	Genbank	CDS	1544620	1545789	.	-	0	ID=cds-ABJ53766.1;Parent=gene-SPD_1522;Dbxref=NCBI_GP:ABJ53766.1;Name=ABJ53766.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1712%3B equivalent gene in S.pneumoniae R6 %3D spr1556%3B identified by match to protein family HMM PF07261;gbkey=CDS;locus_tag=SPD_1522;product=hypothetical protein;protein_id=ABJ53766.1;transl_table=11
CP000410.2	Genbank	gene	1545790	1546263	.	-	.	ID=gene-SPD_1523;Name=SPD_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1523
CP000410.2	Genbank	CDS	1545790	1546263	.	-	0	ID=cds-ABJ55026.1;Parent=gene-SPD_1523;Dbxref=NCBI_GP:ABJ55026.1;Name=ABJ55026.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1713%3B equivalent gene in S.pneumoniae R6 %3D spr1557%3B identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244;gbkey=CDS;locus_tag=SPD_1523;product=transcriptional regulator%2C NrdR family protein;protein_id=ABJ55026.1;transl_table=11
CP000410.2	Genbank	gene	1546403	1546768	.	+	.	ID=gene-SPD_1524;Name=SPD_1524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1524
CP000410.2	Genbank	CDS	1546403	1546768	.	+	0	ID=cds-ABJ55088.1;Parent=gene-SPD_1524;Dbxref=NCBI_GP:ABJ55088.1;Name=ABJ55088.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1714%3B equivalent gene in S.pneumoniae R6 %3D spr1558%3B identified by match to protein family HMM PF00392;gbkey=CDS;locus_tag=SPD_1524;product=transcriptional regulator%2C GntR family protein;protein_id=ABJ55088.1;transl_table=11
CP000410.2	Genbank	gene	1546773	1547468	.	+	.	ID=gene-SPD_1525;Name=SPD_1525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1525
CP000410.2	Genbank	CDS	1546773	1547468	.	+	0	ID=cds-ABJ54268.1;Parent=gene-SPD_1525;Dbxref=NCBI_GP:ABJ54268.1;Name=ABJ54268.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1715%3B equivalent gene in S.pneumoniae R6 %3D spr1559%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1525;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54268.1;transl_table=11
CP000410.2	Genbank	gene	1547485	1548252	.	+	.	ID=gene-SPD_1526;Name=SPD_1526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1526
CP000410.2	Genbank	CDS	1547485	1548252	.	+	0	ID=cds-ABJ54262.1;Parent=gene-SPD_1526;Dbxref=NCBI_GP:ABJ54262.1;Name=ABJ54262.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1715%3B equivalent gene in S.pneumoniae R6 %3D spr1560;gbkey=CDS;locus_tag=SPD_1526;product=membrane protein%2C putative;protein_id=ABJ54262.1;transl_table=11
CP000410.2	Genbank	gene	1548665	1549864	.	-	.	ID=gene-SPD_1527;Name=SPD_1527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1527
CP000410.2	Genbank	CDS	1548665	1549864	.	-	0	ID=cds-ABJ55294.1;Parent=gene-SPD_1527;Dbxref=NCBI_GP:ABJ55294.1;Name=ABJ55294.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1716%3B equivalent gene in S.pneumoniae R6 %3D spr1561;gbkey=CDS;locus_tag=SPD_1527;product=membrane protein%2C putative;protein_id=ABJ55294.1;transl_table=11
CP000410.2	Genbank	gene	1549861	1550754	.	-	.	ID=gene-SPD_1528;Name=SPD_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1528
CP000410.2	Genbank	CDS	1549861	1550754	.	-	0	ID=cds-ABJ54476.1;Parent=gene-SPD_1528;Dbxref=NCBI_GP:ABJ54476.1;Name=ABJ54476.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1717%3B equivalent gene in S.pneumoniae R6 %3D spr1562%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1528;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54476.1;transl_table=11
CP000410.2	Genbank	pseudogene	1551520	1551648	.	+	.	ID=gene-SPD_1529;Name=SPD_1529;Note=equivalent gene in S.pneumoniae R6 %3D spr1563%3B IS1239%2C transposase%2C putative%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1529;pseudo=true
CP000410.2	Genbank	gene	1552063	1552680	.	+	.	ID=gene-SPD_1530;Name=SPD_1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1530
CP000410.2	Genbank	CDS	1552063	1552680	.	+	0	ID=cds-ABJ54181.1;Parent=gene-SPD_1530;Dbxref=NCBI_GP:ABJ54181.1;Name=ABJ54181.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1720%3B equivalent gene in S.pneumoniae R6 %3D spr1564;gbkey=CDS;locus_tag=SPD_1530;product=membrane protein%2C putative;protein_id=ABJ54181.1;transl_table=11
CP000410.2	Genbank	gene	1553000	1553887	.	-	.	ID=gene-SPD_1531;Name=scrK;gbkey=Gene;gene=scrK;gene_biotype=protein_coding;locus_tag=SPD_1531
CP000410.2	Genbank	CDS	1553000	1553887	.	-	0	ID=cds-ABJ55031.1;Parent=gene-SPD_1531;Dbxref=NCBI_GP:ABJ55031.1;Name=ABJ55031.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1721%3B equivalent gene in S.pneumoniae R6 %3D spr1565%3B identified by match to protein family HMM PF00480;gbkey=CDS;gene=scrK;locus_tag=SPD_1531;product=fructokinase;protein_id=ABJ55031.1;transl_table=11
CP000410.2	Genbank	gene	1554036	1555919	.	-	.	ID=gene-SPD_1532;Name=SPD_1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1532
CP000410.2	Genbank	CDS	1554036	1555919	.	-	0	ID=cds-ABJ55412.1;Parent=gene-SPD_1532;Dbxref=NCBI_GP:ABJ55412.1;Name=ABJ55412.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1722%3B equivalent gene in S.pneumoniae R6 %3D spr1566%3B identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR01996;gbkey=CDS;locus_tag=SPD_1532;product=PTS system IIABC components;protein_id=ABJ55412.1;transl_table=11
CP000410.2	Genbank	gene	1556046	1556243	.	-	.	ID=gene-SPD_1533;Name=SPD_1533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1533
CP000410.2	Genbank	CDS	1556046	1556243	.	-	0	ID=cds-ABJ54093.1;Parent=gene-SPD_1533;Dbxref=NCBI_GP:ABJ54093.1;Name=ABJ54093.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1723;gbkey=CDS;locus_tag=SPD_1533;product=hypothetical protein;protein_id=ABJ54093.1;transl_table=11
CP000410.2	Genbank	gene	1556296	1557750	.	+	.	ID=gene-SPD_1534;Name=scrB;gbkey=Gene;gene=scrB;gene_biotype=protein_coding;locus_tag=SPD_1534
CP000410.2	Genbank	CDS	1556296	1557750	.	+	0	ID=cds-ABJ54708.1;Parent=gene-SPD_1534;Dbxref=NCBI_GP:ABJ54708.1;Name=ABJ54708.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1724%3B equivalent gene in S.pneumoniae R6 %3D spr1568%3B identified by match to protein family HMM PF00251%3B match to protein family HMM TIGR01322;gbkey=CDS;gene=scrB;locus_tag=SPD_1534;product=sucrose-6-phosphate hydrolase;protein_id=ABJ54708.1;transl_table=11
CP000410.2	Genbank	gene	1557731	1558696	.	+	.	ID=gene-SPD_1535;Name=scrR;gbkey=Gene;gene=scrR;gene_biotype=protein_coding;locus_tag=SPD_1535
CP000410.2	Genbank	CDS	1557731	1558696	.	+	0	ID=cds-ABJ54357.1;Parent=gene-SPD_1535;Dbxref=NCBI_GP:ABJ54357.1;Name=ABJ54357.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1725%3B equivalent gene in S.pneumoniae R6 %3D spr1569%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;gene=scrR;locus_tag=SPD_1535;product=sucrose operon repressor;protein_id=ABJ54357.1;transl_table=11
CP000410.2	Genbank	gene	1558731	1560005	.	-	.	ID=gene-SPD_1536;Name=SPD_1536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1536
CP000410.2	Genbank	CDS	1558731	1560005	.	-	0	ID=cds-ABJ55014.1;Parent=gene-SPD_1536;Dbxref=NCBI_GP:ABJ55014.1;Name=ABJ55014.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1726%3B equivalent gene in S.pneumoniae R6 %3D spr1570%3B identified by match to protein family HMM TIGR00532;gbkey=CDS;locus_tag=SPD_1536;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=ABJ55014.1;transl_table=11
CP000410.2	Genbank	gene	1560005	1561201	.	-	.	ID=gene-SPD_1537;Name=mvaS;gbkey=Gene;gene=mvaS;gene_biotype=protein_coding;locus_tag=SPD_1537
CP000410.2	Genbank	CDS	1560005	1561201	.	-	0	ID=cds-ABJ53679.1;Parent=gene-SPD_1537;Dbxref=NCBI_GP:ABJ53679.1;Name=ABJ53679.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1727%3B equivalent gene in S.pneumoniae R6 %3D spr1571%3B identified by match to protein family HMM PF01154%3B match to protein family HMM TIGR01835;gbkey=CDS;gene=mvaS;locus_tag=SPD_1537;product=hydroxymethylglutaryl-CoA synthase;protein_id=ABJ53679.1;transl_table=11
CP000410.2	Genbank	gene	1561308	1561595	.	-	.	ID=gene-SPD_1538;Name=SPD_1538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1538
CP000410.2	Genbank	CDS	1561308	1561595	.	-	0	ID=cds-ABJ54152.1;Parent=gene-SPD_1538;Dbxref=NCBI_GP:ABJ54152.1;Name=ABJ54152.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1728%3B equivalent gene in S.pneumoniae R6 %3D spr1572;gbkey=CDS;locus_tag=SPD_1538;product=hypothetical protein;protein_id=ABJ54152.1;transl_table=11
CP000410.2	Genbank	pseudogene	1561624	1562247	.	-	.	ID=gene-SPD_1539;Name=SPD_1539;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2079%3B equivalent gene in S.pneumoniae R6 %3D spr1573%3B IS1381%2C transposase OrfA/OrfB%2C truncation%3B identified by match to protein family HMM PF01609;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1539;pseudo=true
CP000410.2	Genbank	gene	1562312	1562761	.	-	.	ID=gene-SPD_1540;Name=SPD_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1540
CP000410.2	Genbank	CDS	1562312	1562761	.	-	0	ID=cds-ABJ54830.1;Parent=gene-SPD_1540;Dbxref=NCBI_GP:ABJ54830.1;Name=ABJ54830.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1730%3B equivalent gene in S.pneumoniae R6 %3D spr1575;gbkey=CDS;locus_tag=SPD_1540;product=membrane protein%2C putative;protein_id=ABJ54830.1;transl_table=11
CP000410.2	Genbank	gene	1562763	1563521	.	-	.	ID=gene-SPD_1541;Name=SPD_1541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1541
CP000410.2	Genbank	CDS	1562763	1563521	.	-	0	ID=cds-ABJ54559.1;Parent=gene-SPD_1541;Dbxref=NCBI_GP:ABJ54559.1;Name=ABJ54559.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1731%3B equivalent gene in S.pneumoniae R6 %3D spr1576%3B identified by match to protein family HMM PF06738;gbkey=CDS;locus_tag=SPD_1541;product=membrane protein%2C putative;protein_id=ABJ54559.1;transl_table=11
CP000410.2	Genbank	gene	1563636	1565615	.	-	.	ID=gene-SPD_1542;Name=SPD_1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1542
CP000410.2	Genbank	CDS	1563636	1565615	.	-	0	ID=cds-ABJ55478.1;Parent=gene-SPD_1542;Dbxref=NCBI_GP:ABJ55478.1;Name=ABJ55478.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1732%3B equivalent gene in S.pneumoniae R6 %3D spr1577%3B identified by match to protein family HMM PF00069%3B match to protein family HMM PF01163%3B match to protein family HMM PF03793;gbkey=CDS;locus_tag=SPD_1542;product=serine/threonine protein kinase;protein_id=ABJ55478.1;transl_table=11
CP000410.2	Genbank	gene	1565612	1566352	.	-	.	ID=gene-SPD_1543;Name=SPD_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1543
CP000410.2	Genbank	CDS	1565612	1566352	.	-	0	ID=cds-ABJ54228.1;Parent=gene-SPD_1543;Dbxref=NCBI_GP:ABJ54228.1;Name=ABJ54228.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1733%3B equivalent gene in S.pneumoniae R6 %3D spr1578%3B identified by match to protein family HMM PF00481;gbkey=CDS;locus_tag=SPD_1543;product=phosphatase%2C putative;protein_id=ABJ54228.1;transl_table=11
CP000410.2	Genbank	gene	1566367	1567680	.	-	.	ID=gene-SPD_1544;Name=sun;gbkey=Gene;gene=sun;gene_biotype=protein_coding;locus_tag=SPD_1544
CP000410.2	Genbank	CDS	1566367	1567680	.	-	0	ID=cds-ABJ55326.1;Parent=gene-SPD_1544;Dbxref=NCBI_GP:ABJ55326.1;Name=ABJ55326.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1734%3B equivalent gene in S.pneumoniae R6 %3D spr1579%3B identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563;gbkey=CDS;gene=sun;locus_tag=SPD_1544;product=ribosomal RNA small subunit methyltransferase B;protein_id=ABJ55326.1;transl_table=11
CP000410.2	Genbank	gene	1567673	1568608	.	-	.	ID=gene-SPD_1545;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SPD_1545
CP000410.2	Genbank	CDS	1567673	1568608	.	-	0	ID=cds-ABJ54065.1;Parent=gene-SPD_1545;Dbxref=NCBI_GP:ABJ54065.1;Name=ABJ54065.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1735%3B equivalent gene in S.pneumoniae R6 %3D spr1580%3B identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460;gbkey=CDS;gene=fmt;locus_tag=SPD_1545;product=methionyl-tRNA formyltransferase;protein_id=ABJ54065.1;transl_table=11
CP000410.2	Genbank	gene	1568621	1571017	.	-	.	ID=gene-SPD_1546;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=SPD_1546
CP000410.2	Genbank	CDS	1568621	1571017	.	-	0	ID=cds-ABJ55257.1;Parent=gene-SPD_1546;Dbxref=NCBI_GP:ABJ55257.1;Name=ABJ55257.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1736%3B equivalent gene in S.pneumoniae R6 %3D spr1581%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595;gbkey=CDS;gene=priA;locus_tag=SPD_1546;product=primosomal protein N';protein_id=ABJ55257.1;transl_table=11
CP000410.2	Genbank	gene	1571083	1571397	.	-	.	ID=gene-SPD_1547;Name=SPD_1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1547
CP000410.2	Genbank	CDS	1571083	1571397	.	-	0	ID=cds-ABJ53875.1;Parent=gene-SPD_1547;Dbxref=NCBI_GP:ABJ53875.1;Name=ABJ53875.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1737%3B equivalent gene in S.pneumoniae R6 %3D spr1582%3B identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690;gbkey=CDS;locus_tag=SPD_1547;product=DNA-directed RNA polymerase omega chain%2C putative;protein_id=ABJ53875.1;transl_table=11
CP000410.2	Genbank	gene	1571422	1572048	.	-	.	ID=gene-SPD_1548;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SPD_1548
CP000410.2	Genbank	CDS	1571422	1572048	.	-	0	ID=cds-ABJ54954.1;Parent=gene-SPD_1548;Dbxref=NCBI_GP:ABJ54954.1;Name=ABJ54954.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1738%3B equivalent gene in S.pneumoniae R6 %3D spr1583%3B identified by match to protein family HMM PF00625;gbkey=CDS;gene=gmk;locus_tag=SPD_1548;product=guanylate kinase;protein_id=ABJ54954.1;transl_table=11
CP000410.2	Genbank	gene	1572178	1573791	.	-	.	ID=gene-SPD_1549;Name=SPD_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1549
CP000410.2	Genbank	CDS	1572178	1573791	.	-	0	ID=cds-ABJ55165.1;Parent=gene-SPD_1549;Dbxref=NCBI_GP:ABJ55165.1;Name=ABJ55165.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1739%3B equivalent gene in S.pneumoniae R6 %3D spr1584%3B identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277;gbkey=CDS;locus_tag=SPD_1549;product=KH domain protein;protein_id=ABJ55165.1;transl_table=11
CP000410.2	Genbank	gene	1573982	1574236	.	-	.	ID=gene-SPD_1550;Name=SPD_1550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1550
CP000410.2	Genbank	CDS	1573982	1574236	.	-	0	ID=cds-ABJ54134.1;Parent=gene-SPD_1550;Dbxref=NCBI_GP:ABJ54134.1;Name=ABJ54134.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1740%3B equivalent gene in S.pneumoniae R6 %3D spr1585%3B identified by match to protein family HMM PF06769%3B match to protein family HMM TIGR02116;gbkey=CDS;locus_tag=SPD_1550;product=addiction module toxin%2C Txe/YoeB family protein;protein_id=ABJ54134.1;transl_table=11
CP000410.2	Genbank	gene	1574240	1574500	.	-	.	ID=gene-SPD_1551;Name=SPD_1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1551
CP000410.2	Genbank	CDS	1574240	1574500	.	-	0	ID=cds-ABJ55245.1;Parent=gene-SPD_1551;Dbxref=NCBI_GP:ABJ55245.1;Name=ABJ55245.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1741%3B equivalent gene in S.pneumoniae R6 %3D spr1586%3B identified by match to protein family HMM PF02604%3B match to protein family HMM TIGR01552;gbkey=CDS;locus_tag=SPD_1551;product=prevent-host-death family protein;protein_id=ABJ55245.1;transl_table=11
CP000410.2	Genbank	gene	1574732	1575829	.	-	.	ID=gene-SPD_1552;Name=SPD_1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1552
CP000410.2	Genbank	CDS	1574732	1575829	.	-	0	ID=cds-ABJ54378.1;Parent=gene-SPD_1552;Dbxref=NCBI_GP:ABJ54378.1;Name=ABJ54378.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1742%3B equivalent gene in S.pneumoniae R6 %3D spr1587%3B identified by match to protein family HMM PF05636;gbkey=CDS;locus_tag=SPD_1552;product=hypothetical protein;protein_id=ABJ54378.1;transl_table=11
CP000410.2	Genbank	gene	1575839	1576585	.	-	.	ID=gene-SPD_1553;Name=SPD_1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1553
CP000410.2	Genbank	CDS	1575839	1576585	.	-	0	ID=cds-ABJ55348.1;Parent=gene-SPD_1553;Dbxref=NCBI_GP:ABJ55348.1;Name=ABJ55348.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1743%3B equivalent gene in S.pneumoniae R6 %3D spr1588;gbkey=CDS;locus_tag=SPD_1553;product=hypothetical protein;protein_id=ABJ55348.1;transl_table=11
CP000410.2	Genbank	gene	1576688	1577041	.	-	.	ID=gene-SPD_1554;Name=SPD_1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1554
CP000410.2	Genbank	CDS	1576688	1577041	.	-	0	ID=cds-ABJ53849.1;Parent=gene-SPD_1554;Dbxref=NCBI_GP:ABJ53849.1;Name=ABJ53849.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1744%3B equivalent gene in S.pneumoniae R6 %3D spr1589%3B identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090;gbkey=CDS;locus_tag=SPD_1554;product=iojap-related protein;protein_id=ABJ53849.1;transl_table=11
CP000410.2	Genbank	gene	1577054	1577554	.	-	.	ID=gene-SPD_1555;Name=SPD_1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1555
CP000410.2	Genbank	CDS	1577054	1577554	.	-	0	ID=cds-ABJ55023.1;Parent=gene-SPD_1555;Dbxref=NCBI_GP:ABJ55023.1;Name=ABJ55023.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1745%3B equivalent gene in S.pneumoniae R6 %3D spr1590%3B identified by match to protein family HMM PF00857;gbkey=CDS;locus_tag=SPD_1555;product=isochorismatase family protein;protein_id=ABJ55023.1;transl_table=11
CP000410.2	Genbank	gene	1577555	1578148	.	-	.	ID=gene-SPD_1556;Name=SPD_1556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1556
CP000410.2	Genbank	CDS	1577555	1578148	.	-	0	ID=cds-ABJ53665.1;Parent=gene-SPD_1556;Dbxref=NCBI_GP:ABJ53665.1;Name=ABJ53665.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1746%3B equivalent gene in S.pneumoniae R6 %3D spr1591%3B identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR00488;gbkey=CDS;locus_tag=SPD_1556;product=conserved hypothetical protein TIGR00488;protein_id=ABJ53665.1;transl_table=11
CP000410.2	Genbank	gene	1578148	1578777	.	-	.	ID=gene-SPD_1557;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=SPD_1557
CP000410.2	Genbank	CDS	1578148	1578777	.	-	0	ID=cds-ABJ54130.1;Parent=gene-SPD_1557;Dbxref=NCBI_GP:ABJ54130.1;Name=ABJ54130.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1747%3B equivalent gene in S.pneumoniae R6 %3D spr1592%3B identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482;gbkey=CDS;gene=nadD;locus_tag=SPD_1557;product=nicotinate (nicotinamide) nucleotide adenylyltransferase;protein_id=ABJ54130.1;transl_table=11
CP000410.2	Genbank	gene	1578829	1579140	.	-	.	ID=gene-SPD_1558;Name=SPD_1558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1558
CP000410.2	Genbank	CDS	1578829	1579140	.	-	0	ID=cds-ABJ53937.1;Parent=gene-SPD_1558;Dbxref=NCBI_GP:ABJ53937.1;Name=ABJ53937.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1748%3B equivalent gene in S.pneumoniae R6 %3D spr1593%3B identified by match to protein family HMM PF01985%3B match to protein family HMM TIGR00253;gbkey=CDS;locus_tag=SPD_1558;product=conserved hypothetical protein TIGR00253;protein_id=ABJ53937.1;transl_table=11
CP000410.2	Genbank	gene	1579355	1580461	.	-	.	ID=gene-SPD_1559;Name=SPD_1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1559
CP000410.2	Genbank	CDS	1579355	1580461	.	-	0	ID=cds-ABJ54566.1;Parent=gene-SPD_1559;Dbxref=NCBI_GP:ABJ54566.1;Name=ABJ54566.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1749%3B equivalent gene in S.pneumoniae R6 %3D spr1594%3B identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00650;gbkey=CDS;locus_tag=SPD_1559;product=GTP-binding protein;protein_id=ABJ54566.1;transl_table=11
CP000410.2	Genbank	gene	1580464	1580991	.	-	.	ID=gene-SPD_1560;Name=SPD_1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1560
CP000410.2	Genbank	CDS	1580464	1580991	.	-	0	ID=cds-ABJ55503.1;Parent=gene-SPD_1560;Dbxref=NCBI_GP:ABJ55503.1;Name=ABJ55503.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1750%3B equivalent gene in S.pneumoniae R6 %3D spr1595%3B identified by match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01668;gbkey=CDS;locus_tag=SPD_1560;product=HAD superfamily protein (subfamily IIIA) phosphatase;protein_id=ABJ55503.1;transl_table=11
CP000410.2	Genbank	gene	1581006	1581902	.	-	.	ID=gene-SPD_1561;Name=SPD_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1561
CP000410.2	Genbank	CDS	1581006	1581902	.	-	0	ID=cds-ABJ54438.1;Parent=gene-SPD_1561;Dbxref=NCBI_GP:ABJ54438.1;Name=ABJ54438.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1751%3B equivalent gene in S.pneumoniae R6 %3D spr1596%3B identified by match to protein family HMM PF01544;gbkey=CDS;locus_tag=SPD_1561;product=magnesium transporter%2C CorA family protein%2C putative;protein_id=ABJ54438.1;transl_table=11
CP000410.2	Genbank	gene	1581959	1582555	.	-	.	ID=gene-SPD_1562;Name=SPD_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1562
CP000410.2	Genbank	CDS	1581959	1582555	.	-	0	ID=cds-ABJ55246.1;Parent=gene-SPD_1562;Dbxref=NCBI_GP:ABJ55246.1;Name=ABJ55246.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1752%3B equivalent gene in S.pneumoniae R6 %3D spr1597%3B identified by match to protein family HMM PF00924;gbkey=CDS;locus_tag=SPD_1562;product=small conductance mechanosensitive ion channel (MscS) family protein;protein_id=ABJ55246.1;transl_table=11
CP000410.2	Genbank	gene	1582908	1583867	.	+	.	ID=gene-SPD_1563;Name=SPD_1563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1563
CP000410.2	Genbank	CDS	1582908	1583867	.	+	0	ID=cds-ABJ55007.1;Parent=gene-SPD_1563;Dbxref=NCBI_GP:ABJ55007.1;Name=ABJ55007.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1598%3B identified by match to protein family HMM PF00375;gbkey=CDS;locus_tag=SPD_1563;product=dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein;protein_id=ABJ55007.1;transl_table=11
CP000410.2	Genbank	gene	1583935	1584888	.	+	.	ID=gene-SPD_1564;Name=SPD_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1564
CP000410.2	Genbank	CDS	1583935	1584888	.	+	0	ID=cds-ABJ55459.1;Parent=gene-SPD_1564;Dbxref=NCBI_GP:ABJ55459.1;Name=ABJ55459.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1754%3B equivalent gene in S.pneumoniae R6 %3D spr1599%3B identified by match to protein family HMM PF06081;gbkey=CDS;locus_tag=SPD_1564;product=hypothetical protein;protein_id=ABJ55459.1;transl_table=11
CP000410.2	Genbank	gene	1585032	1585412	.	+	.	ID=gene-SPD_1565;Name=SPD_1565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1565
CP000410.2	Genbank	CDS	1585032	1585412	.	+	0	ID=cds-ABJ54811.1;Parent=gene-SPD_1565;Dbxref=NCBI_GP:ABJ54811.1;Name=ABJ54811.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1774%3B equivalent gene in S.pneumoniae R6 %3D spr1600%3B identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=SPD_1565;product=transcriptional regulator%2C putative;protein_id=ABJ54811.1;transl_table=11
CP000410.2	Genbank	gene	1585430	1585732	.	+	.	ID=gene-SPD_1566;Name=SPD_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1566
CP000410.2	Genbank	CDS	1585430	1585732	.	+	0	ID=cds-ABJ53983.1;Parent=gene-SPD_1566;Dbxref=NCBI_GP:ABJ53983.1;Name=ABJ53983.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1775%3B equivalent gene in S.pneumoniae R6 %3D spr1601;gbkey=CDS;locus_tag=SPD_1566;product=hypothetical protein;protein_id=ABJ53983.1;transl_table=11
CP000410.2	Genbank	gene	1585749	1586063	.	+	.	ID=gene-SPD_1567;Name=trx;gbkey=Gene;gene=trx;gene_biotype=protein_coding;locus_tag=SPD_1567
CP000410.2	Genbank	CDS	1585749	1586063	.	+	0	ID=cds-ABJ55076.1;Parent=gene-SPD_1567;Dbxref=NCBI_GP:ABJ55076.1;Name=ABJ55076.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1776%3B equivalent gene in S.pneumoniae R6 %3D spr1602%3B identified by match to protein family HMM PF00085%3B match to protein family HMM TIGR01068;gbkey=CDS;gene=trx;locus_tag=SPD_1567;product=thioredoxin;protein_id=ABJ55076.1;transl_table=11
CP000410.2	Genbank	gene	1586557	1586901	.	+	.	ID=gene-SPD_1568;Name=SPD_1568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1568
CP000410.2	Genbank	CDS	1586557	1586901	.	+	0	ID=cds-ABJ54200.1;Parent=gene-SPD_1568;Dbxref=NCBI_GP:ABJ54200.1;Name=ABJ54200.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1777%3B equivalent gene in S.pneumoniae R6 %3D spr1603%3B identified by match to protein family HMM PF01227;gbkey=CDS;locus_tag=SPD_1568;product=GTP cyclohydrolase%2C putative;protein_id=ABJ54200.1;transl_table=11
CP000410.2	Genbank	gene	1587381	1588049	.	-	.	ID=gene-SPD_1569;Name=SPD_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1569
CP000410.2	Genbank	CDS	1587381	1588049	.	-	0	ID=cds-ABJ54029.1;Parent=gene-SPD_1569;Dbxref=NCBI_GP:ABJ54029.1;Name=ABJ54029.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1778%3B equivalent gene in S.pneumoniae R6 %3D spr1604%3B identified by match to protein family HMM PF00230;gbkey=CDS;locus_tag=SPD_1569;product=aquaporin;protein_id=ABJ54029.1;transl_table=11
CP000410.2	Genbank	gene	1588160	1588714	.	-	.	ID=gene-SPD_1570;Name=SPD_1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1570
CP000410.2	Genbank	CDS	1588160	1588714	.	-	0	ID=cds-ABJ53745.1;Parent=gene-SPD_1570;Dbxref=NCBI_GP:ABJ53745.1;Name=ABJ53745.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1779%3B equivalent gene in S.pneumoniae R6 %3D spr1605;gbkey=CDS;locus_tag=SPD_1570;product=hypothetical protein;protein_id=ABJ53745.1;transl_table=11
CP000410.2	Genbank	gene	1588960	1590756	.	-	.	ID=gene-SPD_1571;Name=SPD_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1571
CP000410.2	Genbank	CDS	1588960	1590756	.	-	0	ID=cds-ABJ54880.1;Parent=gene-SPD_1571;Dbxref=NCBI_GP:ABJ54880.1;Name=ABJ54880.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1780%3B equivalent gene in S.pneumoniae R6 %3D spr1606%3B identified by match to protein family HMM PF01432%3B match to protein family HMM TIGR00181;gbkey=CDS;locus_tag=SPD_1571;product=oligoendopeptidase F%2C putative;protein_id=ABJ54880.1;transl_table=11
CP000410.2	Genbank	gene	1590767	1591510	.	-	.	ID=gene-SPD_1572;Name=SPD_1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1572
CP000410.2	Genbank	CDS	1590767	1591510	.	-	0	ID=cds-ABJ53989.1;Parent=gene-SPD_1572;Dbxref=NCBI_GP:ABJ53989.1;Name=ABJ53989.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1781%3B equivalent gene in S.pneumoniae R6 %3D spr1607%3B identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046;gbkey=CDS;locus_tag=SPD_1572;product=conserved hypothetical protein TIGR00046;protein_id=ABJ53989.1;transl_table=11
CP000410.2	Genbank	gene	1591512	1592462	.	-	.	ID=gene-SPD_1573;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=SPD_1573
CP000410.2	Genbank	CDS	1591512	1592462	.	-	0	ID=cds-ABJ54943.1;Parent=gene-SPD_1573;Dbxref=NCBI_GP:ABJ54943.1;Name=ABJ54943.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1782%3B equivalent gene in S.pneumoniae R6 %3D spr1608%3B identified by match to protein family HMM PF05175%3B match to protein family HMM PF06325%3B match to protein family HMM TIGR00406;gbkey=CDS;gene=prmA;locus_tag=SPD_1573;product=ribosomal protein L11 methyltransferase;protein_id=ABJ54943.1;transl_table=11
CP000410.2	Genbank	gene	1592600	1593028	.	-	.	ID=gene-SPD_1574;Name=SPD_1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1574
CP000410.2	Genbank	CDS	1592600	1593028	.	-	0	ID=cds-ABJ53897.1;Parent=gene-SPD_1574;Dbxref=NCBI_GP:ABJ53897.1;Name=ABJ53897.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1609%3B identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=SPD_1574;product=MutT/nudix family protein;protein_id=ABJ53897.1;transl_table=11
CP000410.2	Genbank	gene	1592994	1594097	.	-	.	ID=gene-SPD_1575;Name=SPD_1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1575
CP000410.2	Genbank	CDS	1592994	1594097	.	-	0	ID=cds-ABJ55390.1;Parent=gene-SPD_1575;Dbxref=NCBI_GP:ABJ55390.1;Name=ABJ55390.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1784%3B equivalent gene in S.pneumoniae R6 %3D spr1610%3B identified by match to protein family HMM PF02163;gbkey=CDS;locus_tag=SPD_1575;product=lipoprotein%2C putative;protein_id=ABJ55390.1;transl_table=11
CP000410.2	Genbank	gene	1594116	1594586	.	-	.	ID=gene-SPD_1576;Name=SPD_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1576
CP000410.2	Genbank	CDS	1594116	1594586	.	-	0	ID=cds-ABJ54129.1;Parent=gene-SPD_1576;Dbxref=NCBI_GP:ABJ54129.1;Name=ABJ54129.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1785%3B equivalent gene in S.pneumoniae R6 %3D spr1611;gbkey=CDS;locus_tag=SPD_1576;product=hypothetical protein;protein_id=ABJ54129.1;transl_table=11
CP000410.2	Genbank	gene	1594877	1595329	.	-	.	ID=gene-SPD_1577;Name=SPD_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1577
CP000410.2	Genbank	CDS	1594877	1595329	.	-	0	ID=cds-ABJ53724.1;Parent=gene-SPD_1577;Dbxref=NCBI_GP:ABJ53724.1;Name=ABJ53724.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1786%3B equivalent gene in S.pneumoniae R6 %3D spr1612%3B identified by match to protein family HMM PF03681;gbkey=CDS;locus_tag=SPD_1577;product=hypothetical protein;protein_id=ABJ53724.1;transl_table=11
CP000410.2	Genbank	gene	1595682	1595861	.	-	.	ID=gene-SPD_1578;Name=SPD_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1578
CP000410.2	Genbank	CDS	1595682	1595861	.	-	0	ID=cds-ABJ54575.1;Parent=gene-SPD_1578;Dbxref=NCBI_GP:ABJ54575.1;Name=ABJ54575.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1614;gbkey=CDS;locus_tag=SPD_1578;product=hypothetical protein;protein_id=ABJ54575.1;transl_table=11
CP000410.2	Genbank	gene	1596026	1596265	.	-	.	ID=gene-SPD_1579;Name=SPD_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1579
CP000410.2	Genbank	CDS	1596026	1596265	.	-	0	ID=cds-ABJ53995.1;Parent=gene-SPD_1579;Dbxref=NCBI_GP:ABJ53995.1;Name=ABJ53995.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1789%3B equivalent gene in S.pneumoniae R6 %3D spr1615;gbkey=CDS;locus_tag=SPD_1579;product=hypothetical protein;protein_id=ABJ53995.1;transl_table=11
CP000410.2	Genbank	gene	1596535	1597806	.	+	.	ID=gene-SPD_1580;Name=SPD_1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1580
CP000410.2	Genbank	CDS	1596535	1597806	.	+	0	ID=cds-ABJ55027.1;Parent=gene-SPD_1580;Dbxref=NCBI_GP:ABJ55027.1;Name=ABJ55027.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1790%3B equivalent gene in S.pneumoniae R6 %3D spr1616%3B identified by match to protein family HMM PF00004;gbkey=CDS;locus_tag=SPD_1580;product=ATPase%2C AAA family protein;protein_id=ABJ55027.1;transl_table=11
CP000410.2	Genbank	gene	1598071	1598143	.	+	.	ID=gene-SPD_1581;Name=SPD_1581;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1581
CP000410.2	Genbank	tRNA	1598071	1598143	.	+	.	ID=rna-SPD_1581;Parent=gene-SPD_1581;gbkey=tRNA;locus_tag=SPD_1581;product=tRNA-Lys
CP000410.2	Genbank	exon	1598071	1598143	.	+	.	ID=exon-SPD_1581-1;Parent=rna-SPD_1581;gbkey=tRNA;locus_tag=SPD_1581;product=tRNA-Lys
CP000410.2	Genbank	gene	1598353	1599672	.	-	.	ID=gene-SPD_1582;Name=SPD_1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1582
CP000410.2	Genbank	CDS	1598353	1599672	.	-	0	ID=cds-ABJ55502.1;Parent=gene-SPD_1582;Dbxref=NCBI_GP:ABJ55502.1;Name=ABJ55502.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1795%3B equivalent gene in S.pneumoniae R6 %3D spr1617%3B identified by match to protein family HMM PF00251%3B match to protein family HMM TIGR01322;gbkey=CDS;locus_tag=SPD_1582;product=sucrose-6-phosphate hydrolase%2C putative;protein_id=ABJ55502.1;transl_table=11
CP000410.2	Genbank	gene	1599682	1600527	.	-	.	ID=gene-SPD_1583;Name=SPD_1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1583
CP000410.2	Genbank	CDS	1599682	1600527	.	-	0	ID=cds-ABJ54402.1;Parent=gene-SPD_1583;Dbxref=NCBI_GP:ABJ54402.1;Name=ABJ54402.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1618%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1583;product=ABC transporter%2C permease protein;protein_id=ABJ54402.1;transl_table=11
CP000410.2	Genbank	gene	1600529	1601431	.	-	.	ID=gene-SPD_1584;Name=SPD_1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1584
CP000410.2	Genbank	CDS	1600529	1601431	.	-	0	ID=cds-ABJ53998.1;Parent=gene-SPD_1584;Dbxref=NCBI_GP:ABJ53998.1;Name=ABJ53998.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1619%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1584;product=ABC transporter%2C permease protein;protein_id=ABJ53998.1;transl_table=11
CP000410.2	Genbank	gene	1601527	1602837	.	-	.	ID=gene-SPD_1585;Name=SPD_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1585
CP000410.2	Genbank	CDS	1601527	1602837	.	-	0	ID=cds-ABJ55241.1;Parent=gene-SPD_1585;Dbxref=NCBI_GP:ABJ55241.1;Name=ABJ55241.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1620%3B identified by match to protein family HMM PF01547;gbkey=CDS;locus_tag=SPD_1585;product=ABC transporter%2C sugar-binding protein;protein_id=ABJ55241.1;transl_table=11
CP000410.2	Genbank	gene	1602964	1603959	.	-	.	ID=gene-SPD_1586;Name=SPD_1586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1586
CP000410.2	Genbank	CDS	1602964	1603959	.	-	0	ID=cds-ABJ53841.1;Parent=gene-SPD_1586;Dbxref=NCBI_GP:ABJ53841.1;Name=ABJ53841.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1621%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;locus_tag=SPD_1586;product=sugar-binding transcriptional regulator%2C LacI family protein;protein_id=ABJ53841.1;transl_table=11
CP000410.2	Genbank	gene	1604321	1605802	.	-	.	ID=gene-SPD_1587;Name=SPD_1587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1587
CP000410.2	Genbank	CDS	1604321	1605802	.	-	0	ID=cds-ABJ54596.1;Parent=gene-SPD_1587;Dbxref=NCBI_GP:ABJ54596.1;Name=ABJ54596.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1800%3B equivalent gene in S.pneumoniae R6 %3D spr1622%3B identified by match to protein family HMM PF05043;gbkey=CDS;locus_tag=SPD_1587;product=transcriptional activator%2C putative;protein_id=ABJ54596.1;transl_table=11
CP000410.2	Genbank	gene	1606492	1607058	.	+	.	ID=gene-SPD_1588;Name=SPD_1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1588
CP000410.2	Genbank	CDS	1606492	1607058	.	+	0	ID=cds-ABJ54423.1;Parent=gene-SPD_1588;Dbxref=NCBI_GP:ABJ54423.1;Name=ABJ54423.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1802%3B equivalent gene in S.pneumoniae R6 %3D spr1623;gbkey=CDS;locus_tag=SPD_1588;product=hypothetical protein;protein_id=ABJ54423.1;transl_table=11
CP000410.2	Genbank	gene	1607070	1607240	.	+	.	ID=gene-SPD_1589;Name=SPD_1589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1589
CP000410.2	Genbank	CDS	1607070	1607240	.	+	0	ID=cds-ABJ53848.1;Parent=gene-SPD_1589;Dbxref=NCBI_GP:ABJ53848.1;Name=ABJ53848.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1803%3B equivalent gene in S.pneumoniae R6 %3D spr1624;gbkey=CDS;locus_tag=SPD_1589;product=lipoprotein%2C putative;protein_id=ABJ53848.1;transl_table=11
CP000410.2	Genbank	gene	1607279	1607887	.	+	.	ID=gene-SPD_1590;Name=SPD_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1590
CP000410.2	Genbank	CDS	1607279	1607887	.	+	0	ID=cds-ABJ54204.1;Parent=gene-SPD_1590;Dbxref=NCBI_GP:ABJ54204.1;Name=ABJ54204.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1804%3B equivalent gene in S.pneumoniae R6 %3D spr1625%3B identified by match to protein family HMM PF03780;gbkey=CDS;locus_tag=SPD_1590;product=general stress protein 24%2C putative;protein_id=ABJ54204.1;transl_table=11
CP000410.2	Genbank	gene	1607918	1608121	.	+	.	ID=gene-SPD_1591;Name=SPD_1591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1591
CP000410.2	Genbank	CDS	1607918	1608121	.	+	0	ID=cds-ABJ54199.1;Parent=gene-SPD_1591;Dbxref=NCBI_GP:ABJ54199.1;Name=ABJ54199.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1805%3B equivalent gene in S.pneumoniae R6 %3D spr1626%3B identified by match to protein family HMM PF05532;gbkey=CDS;locus_tag=SPD_1591;product=hypothetical protein;protein_id=ABJ54199.1;transl_table=11
CP000410.2	Genbank	gene	1608648	1609094	.	-	.	ID=gene-SPD_1592;Name=SPD_1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1592
CP000410.2	Genbank	CDS	1608648	1609094	.	-	0	ID=cds-ABJ55273.1;Parent=gene-SPD_1592;Dbxref=NCBI_GP:ABJ55273.1;Name=ABJ55273.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1807%3B equivalent gene in S.pneumoniae R6 %3D spr1627%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1592;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55273.1;transl_table=11
CP000410.2	Genbank	gene	1609164	1609823	.	+	.	ID=gene-SPD_1593;Name=SPD_1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1593
CP000410.2	Genbank	CDS	1609164	1609823	.	+	0	ID=cds-ABJ54504.1;Parent=gene-SPD_1593;Dbxref=NCBI_GP:ABJ54504.1;Name=ABJ54504.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1808%3B equivalent gene in S.pneumoniae R6 %3D spr1628%3B identified by match to protein family HMM PF01478%3B match to protein family HMM PF06750;gbkey=CDS;locus_tag=SPD_1593;product=type IV prepilin peptidase%2C putative;protein_id=ABJ54504.1;transl_table=11
CP000410.2	Genbank	gene	1609875	1611026	.	-	.	ID=gene-SPD_1594;Name=SPD_1594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1594
CP000410.2	Genbank	CDS	1609875	1611026	.	-	0	ID=cds-ABJ54422.1;Parent=gene-SPD_1594;Dbxref=NCBI_GP:ABJ54422.1;Name=ABJ54422.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1809%3B equivalent gene in S.pneumoniae R6 %3D spr1629%3B identified by match to protein family HMM PF01381%3B match to protein family HMM PF06114;gbkey=CDS;locus_tag=SPD_1594;product=transcriptional regulator;protein_id=ABJ54422.1;transl_table=11
CP000410.2	Genbank	gene	1611041	1611772	.	-	.	ID=gene-SPD_1595;Name=SPD_1595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1595
CP000410.2	Genbank	CDS	1611041	1611772	.	-	0	ID=cds-ABJ55422.1;Parent=gene-SPD_1595;Dbxref=NCBI_GP:ABJ55422.1;Name=ABJ55422.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1810%3B equivalent gene in S.pneumoniae R6 %3D spr1630;gbkey=CDS;locus_tag=SPD_1595;product=hypothetical protein;protein_id=ABJ55422.1;transl_table=11
CP000410.2	Genbank	gene	1612074	1612850	.	-	.	ID=gene-SPD_1596;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=SPD_1596
CP000410.2	Genbank	CDS	1612074	1612850	.	-	0	ID=cds-ABJ53624.1;Parent=gene-SPD_1596;Dbxref=NCBI_GP:ABJ53624.1;Name=ABJ53624.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1811%3B equivalent gene in S.pneumoniae R6 %3D spr1631%3B identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262;gbkey=CDS;gene=trpA;locus_tag=SPD_1596;product=tryptophan synthase%2C alpha subunit;protein_id=ABJ53624.1;transl_table=11
CP000410.2	Genbank	gene	1612843	1614066	.	-	.	ID=gene-SPD_1597;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=SPD_1597
CP000410.2	Genbank	CDS	1612843	1614066	.	-	0	ID=cds-ABJ54918.1;Parent=gene-SPD_1597;Dbxref=NCBI_GP:ABJ54918.1;Name=ABJ54918.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1812%3B equivalent gene in S.pneumoniae R6 %3D spr1632%3B identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263;gbkey=CDS;gene=trpB;locus_tag=SPD_1597;product=tryptophan synthase%2C beta subunit;protein_id=ABJ54918.1;transl_table=11
CP000410.2	Genbank	gene	1614044	1614643	.	-	.	ID=gene-SPD_1598;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=SPD_1598
CP000410.2	Genbank	CDS	1614044	1614643	.	-	0	ID=cds-ABJ54263.1;Parent=gene-SPD_1598;Dbxref=NCBI_GP:ABJ54263.1;Name=ABJ54263.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1813%3B equivalent gene in S.pneumoniae R6 %3D spr1633%3B identified by match to protein family HMM PF00697;gbkey=CDS;gene=trpF;locus_tag=SPD_1598;product=N-(5'phosphoribosyl)anthranilate isomerase;protein_id=ABJ54263.1;transl_table=11
CP000410.2	Genbank	gene	1614630	1615397	.	-	.	ID=gene-SPD_1599;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=SPD_1599
CP000410.2	Genbank	CDS	1614630	1615397	.	-	0	ID=cds-ABJ55134.1;Parent=gene-SPD_1599;Dbxref=NCBI_GP:ABJ55134.1;Name=ABJ55134.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1814%3B equivalent gene in S.pneumoniae R6 %3D spr1634%3B identified by match to protein family HMM PF00218;gbkey=CDS;gene=trpC;locus_tag=SPD_1599;product=indole-3-glycerol phosphate synthase;protein_id=ABJ55134.1;transl_table=11
CP000410.2	Genbank	gene	1615394	1616398	.	-	.	ID=gene-SPD_1600;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=SPD_1600
CP000410.2	Genbank	CDS	1615394	1616398	.	-	0	ID=cds-ABJ54576.1;Parent=gene-SPD_1600;Dbxref=NCBI_GP:ABJ54576.1;Name=ABJ54576.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1815%3B equivalent gene in S.pneumoniae R6 %3D spr1635%3B identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245;gbkey=CDS;gene=trpD;locus_tag=SPD_1600;product=anthranilate phosphoribosyltransferase;protein_id=ABJ54576.1;transl_table=11
CP000410.2	Genbank	gene	1616409	1616975	.	-	.	ID=gene-SPD_1601;Name=trpG;gbkey=Gene;gene=trpG;gene_biotype=protein_coding;locus_tag=SPD_1601
CP000410.2	Genbank	CDS	1616409	1616975	.	-	0	ID=cds-ABJ54371.1;Parent=gene-SPD_1601;Dbxref=NCBI_GP:ABJ54371.1;Name=ABJ54371.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1816%3B equivalent gene in S.pneumoniae R6 %3D spr1636%3B identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;gene=trpG;locus_tag=SPD_1601;product=anthranilate synthase component II;protein_id=ABJ54371.1;transl_table=11
CP000410.2	Genbank	gene	1616972	1618333	.	-	.	ID=gene-SPD_1602;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=SPD_1602
CP000410.2	Genbank	CDS	1616972	1618333	.	-	0	ID=cds-ABJ55221.1;Parent=gene-SPD_1602;Dbxref=NCBI_GP:ABJ55221.1;Name=ABJ55221.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1817%3B equivalent gene in S.pneumoniae R6 %3D spr1637%3B identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00564;gbkey=CDS;gene=trpE;locus_tag=SPD_1602;product=anthranilate synthase component I;protein_id=ABJ55221.1;transl_table=11
CP000410.2	Genbank	gene	1618468	1618623	.	-	.	ID=gene-SPD_1603;Name=SPD_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1603
CP000410.2	Genbank	CDS	1618468	1618623	.	-	0	ID=cds-ABJ54277.1;Parent=gene-SPD_1603;Dbxref=NCBI_GP:ABJ54277.1;Name=ABJ54277.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1638;gbkey=CDS;locus_tag=SPD_1603;product=hypothetical protein;protein_id=ABJ54277.1;transl_table=11
CP000410.2	Genbank	gene	1618627	1618746	.	-	.	ID=gene-SPD_1604;Name=SPD_1604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1604
CP000410.2	Genbank	CDS	1618627	1618746	.	-	0	ID=cds-ABJ54128.1;Parent=gene-SPD_1604;Dbxref=NCBI_GP:ABJ54128.1;Name=ABJ54128.1;gbkey=CDS;locus_tag=SPD_1604;product=hypothetical protein;protein_id=ABJ54128.1;transl_table=11
CP000410.2	Genbank	gene	1619520	1620521	.	-	.	ID=gene-SPD_1605;Name=SPD_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1605
CP000410.2	Genbank	CDS	1619520	1620521	.	-	0	ID=cds-ABJ55025.1;Parent=gene-SPD_1605;Dbxref=NCBI_GP:ABJ55025.1;Name=ABJ55025.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1821%3B equivalent gene in S.pneumoniae R6 %3D spr1639%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;locus_tag=SPD_1605;product=sugar-binding transcriptional regulator%2C LacI family protein;protein_id=ABJ55025.1;transl_table=11
CP000410.2	Genbank	gene	1621093	1621803	.	-	.	ID=gene-SPD_1606;Name=SPD_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1606
CP000410.2	Genbank	CDS	1621093	1621803	.	-	0	ID=cds-ABJ53930.1;Parent=gene-SPD_1606;Dbxref=NCBI_GP:ABJ53930.1;Name=ABJ53930.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1823%3B equivalent gene in S.pneumoniae R6 %3D spr1641%3B identified by match to protein family HMM PF02308;gbkey=CDS;locus_tag=SPD_1606;product=MgtC/SapB family protein;protein_id=ABJ53930.1;transl_table=11
CP000410.2	Genbank	gene	1621806	1623497	.	-	.	ID=gene-SPD_1607;Name=SPD_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1607
CP000410.2	Genbank	CDS	1621806	1623497	.	-	0	ID=cds-ABJ54776.1;Parent=gene-SPD_1607;Dbxref=NCBI_GP:ABJ54776.1;Name=ABJ54776.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1824%3B equivalent gene in S.pneumoniae R6 %3D spr1643%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_1607;product=ABC transporter%2C permease protein;protein_id=ABJ54776.1;transl_table=11
CP000410.2	Genbank	gene	1623509	1624519	.	-	.	ID=gene-SPD_1608;Name=SPD_1608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1608
CP000410.2	Genbank	CDS	1623509	1624519	.	-	0	ID=cds-ABJ54641.1;Parent=gene-SPD_1608;Dbxref=NCBI_GP:ABJ54641.1;Name=ABJ54641.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1825%3B equivalent gene in S.pneumoniae R6 %3D spr1644%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF03459;gbkey=CDS;locus_tag=SPD_1608;product=ABC transporter ATP-binding protein;protein_id=ABJ54641.1;transl_table=11
CP000410.2	Genbank	gene	1624622	1625689	.	-	.	ID=gene-SPD_1609;Name=SPD_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1609
CP000410.2	Genbank	CDS	1624622	1625689	.	-	0	ID=cds-ABJ53723.1;Parent=gene-SPD_1609;Dbxref=NCBI_GP:ABJ53723.1;Name=ABJ53723.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1826%3B equivalent gene in S.pneumoniae R6 %3D spr1645;gbkey=CDS;locus_tag=SPD_1609;product=ABC transporter%2C substrate-binding protein;protein_id=ABJ53723.1;transl_table=11
CP000410.2	Genbank	gene	1625714	1626373	.	-	.	ID=gene-SPD_1610;Name=SPD_1610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1610
CP000410.2	Genbank	CDS	1625714	1626373	.	-	0	ID=cds-ABJ54384.1;Parent=gene-SPD_1610;Dbxref=NCBI_GP:ABJ54384.1;Name=ABJ54384.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1827%3B equivalent gene in S.pneumoniae R6 %3D spr1646;gbkey=CDS;locus_tag=SPD_1610;product=hypothetical protein;protein_id=ABJ54384.1;transl_table=11
CP000410.2	Genbank	gene	1626501	1626614	.	-	.	ID=gene-SPD_1611;Name=SPD_1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1611
CP000410.2	Genbank	CDS	1626501	1626614	.	-	0	ID=cds-ABJ55448.1;Parent=gene-SPD_1611;Dbxref=NCBI_GP:ABJ55448.1;Name=ABJ55448.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1611;product=hypothetical protein;protein_id=ABJ55448.1;transl_table=11
CP000410.2	Genbank	gene	1626583	1627563	.	-	.	ID=gene-SPD_1612;Name=galE-2;gbkey=Gene;gene=galE-2;gene_biotype=protein_coding;locus_tag=SPD_1612
CP000410.2	Genbank	CDS	1626583	1627563	.	-	0	ID=cds-ABJ53864.1;Parent=gene-SPD_1612;Dbxref=NCBI_GP:ABJ53864.1;Name=ABJ53864.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1828%3B equivalent gene in S.pneumoniae R6 %3D spr1647%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF07993%3B match to protein family HMM TIGR01179;gbkey=CDS;gene=galE-2;locus_tag=SPD_1612;product=UDP-glucose 4-epimerase;protein_id=ABJ53864.1;transl_table=11
CP000410.2	Genbank	gene	1627576	1629051	.	-	.	ID=gene-SPD_1613;Name=galT-1;gbkey=Gene;gene=galT-1;gene_biotype=protein_coding;locus_tag=SPD_1613
CP000410.2	Genbank	CDS	1627576	1629051	.	-	0	ID=cds-ABJ55219.1;Parent=gene-SPD_1613;Dbxref=NCBI_GP:ABJ55219.1;Name=ABJ55219.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1829%3B equivalent gene in S.pneumoniae R6 %3D spr1648%3B identified by match to protein family HMM PF01087%3B match to protein family HMM PF02744%3B match to protein family HMM TIGR01239;gbkey=CDS;gene=galT-1;locus_tag=SPD_1613;product=galactose-1-phosphate uridylyltransferase;protein_id=ABJ55219.1;transl_table=11
CP000410.2	Genbank	gene	1629064	1629705	.	-	.	ID=gene-SPD_1614;Name=SPD_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1614
CP000410.2	Genbank	CDS	1629064	1629705	.	-	0	ID=cds-ABJ54643.1;Parent=gene-SPD_1614;Dbxref=NCBI_GP:ABJ54643.1;Name=ABJ54643.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1830%3B equivalent gene in S.pneumoniae R6 %3D spr1649;gbkey=CDS;locus_tag=SPD_1614;product=phosphate transport system regulatory protein PhoU%2C putative;protein_id=ABJ54643.1;transl_table=11
CP000410.2	Genbank	gene	1629763	1630257	.	-	.	ID=gene-SPD_1615;Name=SPD_1615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1615
CP000410.2	Genbank	CDS	1629763	1630257	.	-	0	ID=cds-ABJ53891.1;Parent=gene-SPD_1615;Dbxref=NCBI_GP:ABJ53891.1;Name=ABJ53891.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1831%3B equivalent gene in S.pneumoniae R6 %3D spr1650;gbkey=CDS;locus_tag=SPD_1615;product=hypothetical protein;protein_id=ABJ53891.1;transl_table=11
CP000410.2	Genbank	gene	1630318	1630614	.	-	.	ID=gene-SPD_1616;Name=SPD_1616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1616
CP000410.2	Genbank	CDS	1630318	1630614	.	-	0	ID=cds-ABJ54368.1;Parent=gene-SPD_1616;Dbxref=NCBI_GP:ABJ54368.1;Name=ABJ54368.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1832%3B equivalent gene in S.pneumoniae R6 %3D spr1651;gbkey=CDS;locus_tag=SPD_1616;product=hypothetical protein;protein_id=ABJ54368.1;transl_table=11
CP000410.2	Genbank	gene	1630598	1632724	.	-	.	ID=gene-SPD_1617;Name=SPD_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1617
CP000410.2	Genbank	CDS	1630598	1632724	.	-	0	ID=cds-ABJ53657.1;Parent=gene-SPD_1617;Dbxref=NCBI_GP:ABJ53657.1;Name=ABJ53657.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1833%3B equivalent gene in S.pneumoniae R6 %3D spr1652%3B identified by match to protein family HMM PF04650%3B match to protein family HMM TIGR01168;gbkey=CDS;locus_tag=SPD_1617;product=cell wall surface anchor family protein;protein_id=ABJ53657.1;transl_table=11
CP000410.2	Genbank	gene	1633670	1633846	.	+	.	ID=gene-SPD_1618;Name=SPD_1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1618
CP000410.2	Genbank	CDS	1633670	1633846	.	+	0	ID=cds-ABJ55510.1;Parent=gene-SPD_1618;Dbxref=NCBI_GP:ABJ55510.1;Name=ABJ55510.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1836%3B equivalent gene in S.pneumoniae R6 %3D spr1653;gbkey=CDS;locus_tag=SPD_1618;product=hypothetical protein;protein_id=ABJ55510.1;transl_table=11
CP000410.2	Genbank	gene	1633888	1635114	.	-	.	ID=gene-SPD_1619;Name=SPD_1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1619
CP000410.2	Genbank	CDS	1633888	1635114	.	-	0	ID=cds-ABJ54416.1;Parent=gene-SPD_1619;Dbxref=NCBI_GP:ABJ54416.1;Name=ABJ54416.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1837%3B equivalent gene in S.pneumoniae R6 %3D spr1654%3B identified by match to protein family HMM PF01041;gbkey=CDS;locus_tag=SPD_1619;product=capsular polysaccharide biosynthesis protein%2C putative;protein_id=ABJ54416.1;transl_table=11
CP000410.2	Genbank	gene	1635157	1635849	.	-	.	ID=gene-SPD_1620;Name=SPD_1620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1620
CP000410.2	Genbank	CDS	1635157	1635849	.	-	0	ID=cds-ABJ55289.1;Parent=gene-SPD_1620;Dbxref=NCBI_GP:ABJ55289.1;Name=ABJ55289.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1838%3B equivalent gene in S.pneumoniae R6 %3D spr1655%3B identified by match to protein family HMM PF02397;gbkey=CDS;locus_tag=SPD_1620;product=glycosyl transferase%2C putative;protein_id=ABJ55289.1;transl_table=11
CP000410.2	Genbank	gene	1636022	1637773	.	-	.	ID=gene-SPD_1621;Name=SPD_1621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1621
CP000410.2	Genbank	CDS	1636022	1637773	.	-	0	ID=cds-ABJ54361.1;Parent=gene-SPD_1621;Dbxref=NCBI_GP:ABJ54361.1;Name=ABJ54361.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1839%3B equivalent gene in S.pneumoniae R6 %3D spr1656%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1621;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ54361.1;transl_table=11
CP000410.2	Genbank	gene	1637763	1639508	.	-	.	ID=gene-SPD_1622;Name=SPD_1622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1622
CP000410.2	Genbank	CDS	1637763	1639508	.	-	0	ID=cds-ABJ54047.1;Parent=gene-SPD_1622;Dbxref=NCBI_GP:ABJ54047.1;Name=ABJ54047.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1840%3B equivalent gene in S.pneumoniae R6 %3D spr1657%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1622;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ54047.1;transl_table=11
CP000410.2	Genbank	gene	1639636	1640166	.	-	.	ID=gene-SPD_1623;Name=SPD_1623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1623
CP000410.2	Genbank	CDS	1639636	1640166	.	-	0	ID=cds-ABJ54133.1;Parent=gene-SPD_1623;Dbxref=NCBI_GP:ABJ54133.1;Name=ABJ54133.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1841%3B equivalent gene in S.pneumoniae R6 %3D spr1658%3B identified by match to protein family HMM PF04239;gbkey=CDS;locus_tag=SPD_1623;product=hypothetical protein;protein_id=ABJ54133.1;transl_table=11
CP000410.2	Genbank	gene	1640163	1640432	.	-	.	ID=gene-SPD_1624;Name=SPD_1624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1624
CP000410.2	Genbank	CDS	1640163	1640432	.	-	0	ID=cds-ABJ53783.1;Parent=gene-SPD_1624;Dbxref=NCBI_GP:ABJ53783.1;Name=ABJ53783.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1842%3B equivalent gene in S.pneumoniae R6 %3D spr1659;gbkey=CDS;locus_tag=SPD_1624;product=hypothetical protein;protein_id=ABJ53783.1;transl_table=11
CP000410.2	Genbank	gene	1640392	1640619	.	-	.	ID=gene-SPD_1625;Name=SPD_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1625
CP000410.2	Genbank	CDS	1640392	1640619	.	-	0	ID=cds-ABJ54875.1;Parent=gene-SPD_1625;Dbxref=NCBI_GP:ABJ54875.1;Name=ABJ54875.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1844;gbkey=CDS;locus_tag=SPD_1625;product=hypothetical protein;protein_id=ABJ54875.1;transl_table=11
CP000410.2	Genbank	gene	1640753	1641580	.	+	.	ID=gene-SPD_1626;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=SPD_1626
CP000410.2	Genbank	CDS	1640753	1641580	.	+	0	ID=cds-ABJ54345.1;Parent=gene-SPD_1626;Dbxref=NCBI_GP:ABJ54345.1;Name=ABJ54345.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1845%3B equivalent gene in S.pneumoniae R6 %3D spr1660%3B identified by match to protein family HMM PF03372%3B match to protein family HMM TIGR00195%3B match to protein family HMM TIGR00633;gbkey=CDS;gene=xth;locus_tag=SPD_1626;product=exodeoxyribonuclease III;protein_id=ABJ54345.1;transl_table=11
CP000410.2	Genbank	pseudogene	1641592	1641974	.	+	.	ID=gene-SPD_1627;Name=SPD_1627;Note=equivalent gene in S.pneumoniae R6 %3D spr1661. The R6 and D39 genes are also degenerate relative to orthologs%3B conserved hypothetical protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1627;pseudo=true
CP000410.2	Genbank	gene	1642852	1643433	.	+	.	ID=gene-SPD_1628;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=SPD_1628
CP000410.2	Genbank	CDS	1642852	1643433	.	+	0	ID=cds-ABJ54108.1;Parent=gene-SPD_1628;Dbxref=NCBI_GP:ABJ54108.1;Name=ABJ54108.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1847%3B equivalent gene in S.pneumoniae R6 %3D spr1662%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01744;gbkey=CDS;gene=xpt;locus_tag=SPD_1628;product=xanthine phosphoribosyltransferase;protein_id=ABJ54108.1;transl_table=11
CP000410.2	Genbank	gene	1643433	1644695	.	+	.	ID=gene-SPD_1629;Name=pbuX;gbkey=Gene;gene=pbuX;gene_biotype=protein_coding;locus_tag=SPD_1629
CP000410.2	Genbank	CDS	1643433	1644695	.	+	0	ID=cds-ABJ55274.1;Parent=gene-SPD_1629;Dbxref=NCBI_GP:ABJ55274.1;Name=ABJ55274.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1848%3B equivalent gene in S.pneumoniae R6 %3D spr1663%3B identified by match to protein family HMM PF00860%3B match to protein family HMM PF00916%3B match to protein family HMM TIGR00801;gbkey=CDS;gene=pbuX;locus_tag=SPD_1629;product=xanthine permease;protein_id=ABJ55274.1;transl_table=11
CP000410.2	Genbank	gene	1644746	1645207	.	-	.	ID=gene-SPD_1630;Name=SPD_1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1630
CP000410.2	Genbank	CDS	1644746	1645207	.	-	0	ID=cds-ABJ54160.1;Parent=gene-SPD_1630;Dbxref=NCBI_GP:ABJ54160.1;Name=ABJ54160.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1849%3B equivalent gene in S.pneumoniae R6 %3D spr1664;gbkey=CDS;locus_tag=SPD_1630;product=hypothetical protein;protein_id=ABJ54160.1;transl_table=11
CP000410.2	Genbank	gene	1645204	1645968	.	-	.	ID=gene-SPD_1631;Name=SPD_1631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1631
CP000410.2	Genbank	CDS	1645204	1645968	.	-	0	ID=cds-ABJ54879.1;Parent=gene-SPD_1631;Dbxref=NCBI_GP:ABJ54879.1;Name=ABJ54879.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1850%3B equivalent gene in S.pneumoniae R6 %3D spr1665%3B identified by match to protein family HMM PF06044;gbkey=CDS;locus_tag=SPD_1631;product=Dam-replacing family protein;protein_id=ABJ54879.1;transl_table=11
CP000410.2	Genbank	gene	1646149	1646553	.	-	.	ID=gene-SPD_1632;Name=SPD_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1632
CP000410.2	Genbank	CDS	1646149	1646553	.	-	0	ID=cds-ABJ54302.1;Parent=gene-SPD_1632;Dbxref=NCBI_GP:ABJ54302.1;Name=ABJ54302.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1851%3B equivalent gene in S.pneumoniae R6 %3D spr1666%3B identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;locus_tag=SPD_1632;product=hypothetical protein;protein_id=ABJ54302.1;transl_table=11
CP000410.2	Genbank	gene	1646623	1648104	.	-	.	ID=gene-SPD_1633;Name=galT-2;gbkey=Gene;gene=galT-2;gene_biotype=protein_coding;locus_tag=SPD_1633
CP000410.2	Genbank	CDS	1646623	1648104	.	-	0	ID=cds-ABJ55461.1;Parent=gene-SPD_1633;Dbxref=NCBI_GP:ABJ55461.1;Name=ABJ55461.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1852%3B equivalent gene in S.pneumoniae R6 %3D spr1667%3B identified by match to protein family HMM PF01087%3B match to protein family HMM PF02744%3B match to protein family HMM TIGR01239;gbkey=CDS;gene=galT-2;locus_tag=SPD_1633;product=galactose-1-phosphate uridylyltransferase;protein_id=ABJ55461.1;transl_table=11
CP000410.2	Genbank	gene	1648123	1649301	.	-	.	ID=gene-SPD_1634;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=SPD_1634
CP000410.2	Genbank	CDS	1648123	1649301	.	-	0	ID=cds-ABJ54436.1;Parent=gene-SPD_1634;Dbxref=NCBI_GP:ABJ54436.1;Name=ABJ54436.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1853%3B equivalent gene in S.pneumoniae R6 %3D spr1668%3B identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR00131;gbkey=CDS;gene=galK;locus_tag=SPD_1634;product=galactokinase;protein_id=ABJ54436.1;transl_table=11
CP000410.2	Genbank	gene	1649465	1650472	.	+	.	ID=gene-SPD_1635;Name=galR;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=SPD_1635
CP000410.2	Genbank	CDS	1649465	1650472	.	+	0	ID=cds-ABJ53844.1;Parent=gene-SPD_1635;Dbxref=NCBI_GP:ABJ53844.1;Name=ABJ53844.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1854%3B equivalent gene in S.pneumoniae R6 %3D spr1669%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;gene=galR;locus_tag=SPD_1635;product=galactose operon repressor;protein_id=ABJ53844.1;transl_table=11
CP000410.2	Genbank	gene	1650518	1651555	.	-	.	ID=gene-SPD_1636;Name=SPD_1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1636
CP000410.2	Genbank	CDS	1650518	1651555	.	-	0	ID=cds-ABJ54677.1;Parent=gene-SPD_1636;Dbxref=NCBI_GP:ABJ54677.1;Name=ABJ54677.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1855%3B equivalent gene in S.pneumoniae R6 %3D spr1670%3B identified by match to protein family HMM PF00107;gbkey=CDS;locus_tag=SPD_1636;product=alcohol dehydrogenase%2C zinc-containing;protein_id=ABJ54677.1;transl_table=11
CP000410.2	Genbank	gene	1651556	1651909	.	-	.	ID=gene-SPD_1637;Name=SPD_1637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1637
CP000410.2	Genbank	CDS	1651556	1651909	.	-	0	ID=cds-ABJ54034.1;Parent=gene-SPD_1637;Dbxref=NCBI_GP:ABJ54034.1;Name=ABJ54034.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1856%3B equivalent gene in S.pneumoniae R6 %3D spr1671%3B identified by match to protein family HMM PF00376;gbkey=CDS;locus_tag=SPD_1637;product=transcriptional regulator%2C MerR family protein;protein_id=ABJ54034.1;transl_table=11
CP000410.2	Genbank	gene	1652153	1653043	.	-	.	ID=gene-SPD_1638;Name=SPD_1638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1638
CP000410.2	Genbank	CDS	1652153	1653043	.	-	0	ID=cds-ABJ55253.1;Parent=gene-SPD_1638;Dbxref=NCBI_GP:ABJ55253.1;Name=ABJ55253.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1857%3B equivalent gene in S.pneumoniae R6 %3D spr1672%3B identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=SPD_1638;product=cation efflux system protein;protein_id=ABJ55253.1;transl_table=11
CP000410.2	Genbank	gene	1653176	1653712	.	+	.	ID=gene-SPD_1639;Name=SPD_1639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1639
CP000410.2	Genbank	CDS	1653176	1653712	.	+	0	ID=cds-ABJ54961.1;Parent=gene-SPD_1639;Dbxref=NCBI_GP:ABJ54961.1;Name=ABJ54961.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1858%3B equivalent gene in S.pneumoniae R6 %3D spr1673%3B identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=SPD_1639;product=transcriptional regulator%2C TetR family protein;protein_id=ABJ54961.1;transl_table=11
CP000410.2	Genbank	gene	1653879	1654685	.	-	.	ID=gene-SPD_1640;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=SPD_1640
CP000410.2	Genbank	CDS	1653879	1654685	.	-	0	ID=cds-ABJ53605.1;Parent=gene-SPD_1640;Dbxref=NCBI_GP:ABJ53605.1;Name=ABJ53605.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1859%3B equivalent gene in S.pneumoniae R6 %3D spr1674%3B identified by match to protein family HMM PF04973%3B match to protein family HMM TIGR01528;gbkey=CDS;gene=pnuC;locus_tag=SPD_1640;product=nicotinamide mononucleotide transporter PnuC%2C putative;protein_id=ABJ53605.1;transl_table=11
CP000410.2	Genbank	pseudogene	1655088	1656405	.	+	.	ID=gene-SPD_1641;Name=SPD_1641;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1262%3B equivalent gene in S.pneumoniae R6 %3D spr0042%3B IS1167%2C transposase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1641;pseudo=true
CP000410.2	Genbank	gene	1656514	1658034	.	-	.	ID=gene-SPD_1642;Name=proWX;gbkey=Gene;gene=proWX;gene_biotype=protein_coding;locus_tag=SPD_1642
CP000410.2	Genbank	CDS	1656514	1658034	.	-	0	ID=cds-ABJ54967.1;Parent=gene-SPD_1642;Dbxref=NCBI_GP:ABJ54967.1;Name=ABJ54967.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1860%3B equivalent gene in S.pneumoniae R6 %3D spr1677%3B identified by match to protein family HMM PF00528%3B match to protein family HMM PF04069;gbkey=CDS;gene=proWX;locus_tag=SPD_1642;product=choline transporter (glycine betaine transport system permease protein);protein_id=ABJ54967.1;transl_table=11
CP000410.2	Genbank	gene	1658027	1658755	.	-	.	ID=gene-SPD_1643;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=SPD_1643
CP000410.2	Genbank	CDS	1658027	1658755	.	-	0	ID=cds-ABJ53722.1;Parent=gene-SPD_1643;Dbxref=NCBI_GP:ABJ53722.1;Name=ABJ53722.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1861%3B equivalent gene in S.pneumoniae R6 %3D spr1678%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=proV;locus_tag=SPD_1643;product=choline transporter;protein_id=ABJ53722.1;transl_table=11
CP000410.2	Genbank	gene	1658770	1659534	.	-	.	ID=gene-SPD_1644;Name=SPD_1644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1644
CP000410.2	Genbank	CDS	1658770	1659534	.	-	0	ID=cds-ABJ54721.1;Parent=gene-SPD_1644;Dbxref=NCBI_GP:ABJ54721.1;Name=ABJ54721.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1862%3B equivalent gene in S.pneumoniae R6 %3D spr1679%3B identified by match to protein family HMM PF07366;gbkey=CDS;locus_tag=SPD_1644;product=hypothetical protein;protein_id=ABJ54721.1;transl_table=11
CP000410.2	Genbank	gene	1659538	1659981	.	-	.	ID=gene-SPD_1645;Name=SPD_1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1645
CP000410.2	Genbank	CDS	1659538	1659981	.	-	0	ID=cds-ABJ54363.1;Parent=gene-SPD_1645;Dbxref=NCBI_GP:ABJ54363.1;Name=ABJ54363.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1863%3B equivalent gene in S.pneumoniae R6 %3D spr1680%3B identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=SPD_1645;product=transcriptional regulator%2C MarR family protein;protein_id=ABJ54363.1;transl_table=11
CP000410.2	Genbank	gene	1660663	1660959	.	-	.	ID=gene-SPD_1646;Name=SPD_1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1646
CP000410.2	Genbank	CDS	1660663	1660959	.	-	0	ID=cds-ABJ55095.1;Parent=gene-SPD_1646;Dbxref=NCBI_GP:ABJ55095.1;Name=ABJ55095.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1864%3B equivalent gene in S.pneumoniae R6 %3D spr1681;gbkey=CDS;locus_tag=SPD_1646;product=hypothetical protein;protein_id=ABJ55095.1;transl_table=11
CP000410.2	Genbank	gene	1660981	1662045	.	-	.	ID=gene-SPD_1647;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=SPD_1647
CP000410.2	Genbank	CDS	1660981	1662045	.	-	0	ID=cds-ABJ54497.1;Parent=gene-SPD_1647;Dbxref=NCBI_GP:ABJ54497.1;Name=ABJ54497.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1865%3B equivalent gene in S.pneumoniae R6 %3D spr1682%3B identified by match to protein family HMM PF05343;gbkey=CDS;gene=pepA;locus_tag=SPD_1647;product=glutamyl aminopeptidase PepA;protein_id=ABJ54497.1;transl_table=11
CP000410.2	Genbank	gene	1662446	1663147	.	+	.	ID=gene-SPD_1648;Name=SPD_1648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1648
CP000410.2	Genbank	CDS	1662446	1663147	.	+	0	ID=cds-ABJ53871.1;Parent=gene-SPD_1648;Dbxref=NCBI_GP:ABJ53871.1;Name=ABJ53871.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1867%3B equivalent gene in S.pneumoniae R6 %3D spr1683%3B identified by match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993;gbkey=CDS;locus_tag=SPD_1648;product=NAD-dependent epimerase/dehydratase family protein;protein_id=ABJ53871.1;transl_table=11
CP000410.2	Genbank	gene	1663570	1664529	.	+	.	ID=gene-SPD_1649;Name=SPD_1649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1649
CP000410.2	Genbank	CDS	1663570	1664529	.	+	0	ID=cds-ABJ54210.1;Parent=gene-SPD_1649;Dbxref=NCBI_GP:ABJ54210.1;Name=ABJ54210.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1869%3B equivalent gene in S.pneumoniae R6 %3D spr1684%3B identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=SPD_1649;product=iron-compound ABC transporter%2C permease protein;protein_id=ABJ54210.1;transl_table=11
CP000410.2	Genbank	gene	1664519	1665475	.	+	.	ID=gene-SPD_1650;Name=SPD_1650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1650
CP000410.2	Genbank	CDS	1664519	1665475	.	+	0	ID=cds-ABJ55314.1;Parent=gene-SPD_1650;Dbxref=NCBI_GP:ABJ55314.1;Name=ABJ55314.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1870%3B equivalent gene in S.pneumoniae R6 %3D spr1685%3B identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=SPD_1650;product=iron-compound ABC transporter%2C permease protein;protein_id=ABJ55314.1;transl_table=11
CP000410.2	Genbank	gene	1665472	1666224	.	+	.	ID=gene-SPD_1651;Name=SPD_1651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1651
CP000410.2	Genbank	CDS	1665472	1666224	.	+	0	ID=cds-ABJ54253.1;Parent=gene-SPD_1651;Dbxref=NCBI_GP:ABJ54253.1;Name=ABJ54253.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1871%3B equivalent gene in S.pneumoniae R6 %3D spr1686%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1651;product=iron-compound ABC transporter%2C ATP-binding protein;protein_id=ABJ54253.1;transl_table=11
CP000410.2	Genbank	gene	1666320	1667285	.	+	.	ID=gene-SPD_1652;Name=SPD_1652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1652
CP000410.2	Genbank	CDS	1666320	1667285	.	+	0	ID=cds-ABJ53643.1;Parent=gene-SPD_1652;Dbxref=NCBI_GP:ABJ53643.1;Name=ABJ53643.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1872%3B equivalent gene in S.pneumoniae R6 %3D spr1687%3B identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=SPD_1652;product=iron-compound ABC transporter%2C iron-compound-binding protein;protein_id=ABJ53643.1;transl_table=11
CP000410.2	Genbank	gene	1667510	1667752	.	-	.	ID=gene-SPD_1653;Name=SPD_1653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1653
CP000410.2	Genbank	CDS	1667510	1667752	.	-	0	ID=cds-ABJ54493.1;Parent=gene-SPD_1653;Dbxref=NCBI_GP:ABJ54493.1;Name=ABJ54493.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1873%3B equivalent gene in S.pneumoniae R6 %3D spr1688%3B identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278;gbkey=CDS;locus_tag=SPD_1653;product=conserved hypothetical protein TIGR00278;protein_id=ABJ54493.1;transl_table=11
CP000410.2	Genbank	gene	1667752	1668474	.	-	.	ID=gene-SPD_1654;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=SPD_1654
CP000410.2	Genbank	CDS	1667752	1668474	.	-	0	ID=cds-ABJ54081.1;Parent=gene-SPD_1654;Dbxref=NCBI_GP:ABJ54081.1;Name=ABJ54081.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1874%3B equivalent gene in S.pneumoniae R6 %3D spr1689%3B identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;gene=rluB;locus_tag=SPD_1654;product=ribosomal large subunit pseudouridine synthase B;protein_id=ABJ54081.1;transl_table=11
CP000410.2	Genbank	gene	1668461	1669030	.	-	.	ID=gene-SPD_1655;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=SPD_1655
CP000410.2	Genbank	CDS	1668461	1669030	.	-	0	ID=cds-ABJ54926.1;Parent=gene-SPD_1655;Dbxref=NCBI_GP:ABJ54926.1;Name=ABJ54926.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1875%3B equivalent gene in S.pneumoniae R6 %3D spr1690%3B identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281;gbkey=CDS;gene=scpB;locus_tag=SPD_1655;product=segregation and condensation protein B;protein_id=ABJ54926.1;transl_table=11
CP000410.2	Genbank	gene	1669049	1669777	.	-	.	ID=gene-SPD_1656;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=SPD_1656
CP000410.2	Genbank	CDS	1669049	1669777	.	-	0	ID=cds-ABJ54301.1;Parent=gene-SPD_1656;Dbxref=NCBI_GP:ABJ54301.1;Name=ABJ54301.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1876%3B equivalent gene in S.pneumoniae R6 %3D spr1691%3B identified by match to protein family HMM PF02616;gbkey=CDS;gene=scpA;locus_tag=SPD_1656;product=segregation and condensation protein A;protein_id=ABJ54301.1;transl_table=11
CP000410.2	Genbank	gene	1669777	1670517	.	-	.	ID=gene-SPD_1657;Name=SPD_1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1657
CP000410.2	Genbank	CDS	1669777	1670517	.	-	0	ID=cds-ABJ55336.1;Parent=gene-SPD_1657;Dbxref=NCBI_GP:ABJ55336.1;Name=ABJ55336.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1877%3B equivalent gene in S.pneumoniae R6 %3D spr1692%3B identified by match to protein family HMM PF00589%3B match to protein family HMM PF02899;gbkey=CDS;locus_tag=SPD_1657;product=integrase/recombinase%2C phage integrase family protein;protein_id=ABJ55336.1;transl_table=11
CP000410.2	Genbank	gene	1670508	1670969	.	-	.	ID=gene-SPD_1658;Name=SPD_1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1658
CP000410.2	Genbank	CDS	1670508	1670969	.	-	0	ID=cds-ABJ53990.1;Parent=gene-SPD_1658;Dbxref=NCBI_GP:ABJ53990.1;Name=ABJ53990.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1878%3B equivalent gene in S.pneumoniae R6 %3D spr1693%3B identified by match to protein family HMM PF00571;gbkey=CDS;locus_tag=SPD_1658;product=CBS domain protein;protein_id=ABJ53990.1;transl_table=11
CP000410.2	Genbank	gene	1670966	1671487	.	-	.	ID=gene-SPD_1659;Name=SPD_1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1659
CP000410.2	Genbank	CDS	1670966	1671487	.	-	0	ID=cds-ABJ55085.1;Parent=gene-SPD_1659;Dbxref=NCBI_GP:ABJ55085.1;Name=ABJ55085.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1879%3B equivalent gene in S.pneumoniae R6 %3D spr1694%3B identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040;gbkey=CDS;locus_tag=SPD_1659;product=phosphodiesterase%2C MJ0936 family protein;protein_id=ABJ55085.1;transl_table=11
CP000410.2	Genbank	gene	1671463	1672434	.	-	.	ID=gene-SPD_1660;Name=SPD_1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1660
CP000410.2	Genbank	CDS	1671463	1672434	.	-	0	ID=cds-ABJ53792.1;Parent=gene-SPD_1660;Dbxref=NCBI_GP:ABJ53792.1;Name=ABJ53792.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1880%3B equivalent gene in S.pneumoniae R6 %3D spr1695%3B identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042;gbkey=CDS;locus_tag=SPD_1660;product=non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family protein;protein_id=ABJ53792.1;transl_table=11
CP000410.2	Genbank	gene	1672431	1673225	.	-	.	ID=gene-SPD_1661;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=SPD_1661
CP000410.2	Genbank	CDS	1672431	1673225	.	-	0	ID=cds-ABJ54892.1;Parent=gene-SPD_1661;Dbxref=NCBI_GP:ABJ54892.1;Name=ABJ54892.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1881%3B equivalent gene in S.pneumoniae R6 %3D spr1696%3B identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067;gbkey=CDS;gene=murI;locus_tag=SPD_1661;product=glutamate racemase;protein_id=ABJ54892.1;transl_table=11
CP000410.2	Genbank	gene	1673432	1673680	.	-	.	ID=gene-SPD_1662;Name=SPD_1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1662
CP000410.2	Genbank	CDS	1673432	1673680	.	-	0	ID=cds-ABJ54668.1;Parent=gene-SPD_1662;Dbxref=NCBI_GP:ABJ54668.1;Name=ABJ54668.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1882%3B equivalent gene in S.pneumoniae R6 %3D spr1697;gbkey=CDS;locus_tag=SPD_1662;product=hypothetical protein;protein_id=ABJ54668.1;transl_table=11
CP000410.2	Genbank	gene	1673822	1675447	.	-	.	ID=gene-SPD_1663;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=SPD_1663
CP000410.2	Genbank	CDS	1673822	1675447	.	-	0	ID=cds-ABJ53825.1;Parent=gene-SPD_1663;Dbxref=NCBI_GP:ABJ53825.1;Name=ABJ53825.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1883%3B equivalent gene in S.pneumoniae R6 %3D spr1698%3B identified by match to protein family HMM PF00128%3B match to protein family HMM TIGR02403;gbkey=CDS;gene=treC;locus_tag=SPD_1663;product=alpha%2Calpha-phosphotrehalase;protein_id=ABJ53825.1;transl_table=11
CP000410.2	Genbank	gene	1675625	1677592	.	-	.	ID=gene-SPD_1664;Name=SPD_1664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1664
CP000410.2	Genbank	CDS	1675625	1677592	.	-	0	ID=cds-ABJ55376.1;Parent=gene-SPD_1664;Dbxref=NCBI_GP:ABJ55376.1;Name=ABJ55376.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1884%3B equivalent gene in S.pneumoniae R6 %3D spr1699%3B identified by match to protein family HMM PF00358%3B match to protein family HMM PF00367%3B match to protein family HMM PF02378%3B match to protein family HMM TIGR00826%3B match to protein family HMM TIGR00830%3B match to protein family HMM TIGR01992;gbkey=CDS;locus_tag=SPD_1664;product=PTS system%2C trehalose-specific IIABC components;protein_id=ABJ55376.1;transl_table=11
CP000410.2	Genbank	gene	1677777	1678487	.	+	.	ID=gene-SPD_1665;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=SPD_1665
CP000410.2	Genbank	CDS	1677777	1678487	.	+	0	ID=cds-ABJ54290.1;Parent=gene-SPD_1665;Dbxref=NCBI_GP:ABJ54290.1;Name=ABJ54290.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1885%3B equivalent gene in S.pneumoniae R6 %3D spr1700%3B identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702%3B match to protein family HMM TIGR02404;gbkey=CDS;gene=treR;locus_tag=SPD_1665;product=trehalose operon repressor;protein_id=ABJ54290.1;transl_table=11
CP000410.2	Genbank	pseudogene	1678643	1679949	.	+	.	ID=gene-SPD_1666;Name=SPD_1666;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1262%3B equivalent gene in S.pneumoniae R6 %3D spr1701%3B IS1167%2C transposase%2C degenerate%3B identified by match to protein family HMM PF01610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1666;pseudo=true
CP000410.2	Genbank	gene	1680024	1680950	.	-	.	ID=gene-SPD_1667;Name=amiF;gbkey=Gene;gene=amiF;gene_biotype=protein_coding;locus_tag=SPD_1667
CP000410.2	Genbank	CDS	1680024	1680950	.	-	0	ID=cds-ABJ54851.1;Parent=gene-SPD_1667;Dbxref=NCBI_GP:ABJ54851.1;Name=ABJ54851.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1887%3B equivalent gene in S.pneumoniae R6 %3D spr1703%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=amiF;locus_tag=SPD_1667;product=oligopeptide ABC transporter%2C ATP-binding protein AmiF;protein_id=ABJ54851.1;transl_table=11
CP000410.2	Genbank	gene	1680961	1682028	.	-	.	ID=gene-SPD_1668;Name=amiE;gbkey=Gene;gene=amiE;gene_biotype=protein_coding;locus_tag=SPD_1668
CP000410.2	Genbank	CDS	1680961	1682028	.	-	0	ID=cds-ABJ53755.1;Parent=gene-SPD_1668;Dbxref=NCBI_GP:ABJ53755.1;Name=ABJ53755.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1888%3B equivalent gene in S.pneumoniae R6 %3D spr1704%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01727;gbkey=CDS;gene=amiE;locus_tag=SPD_1668;product=oligopeptide ABC transporter%2C ATP-binding protein AmiE;protein_id=ABJ53755.1;transl_table=11
CP000410.2	Genbank	gene	1682037	1682963	.	-	.	ID=gene-SPD_1669;Name=amiD;gbkey=Gene;gene=amiD;gene_biotype=protein_coding;locus_tag=SPD_1669
CP000410.2	Genbank	CDS	1682037	1682963	.	-	0	ID=cds-ABJ54594.1;Parent=gene-SPD_1669;Dbxref=NCBI_GP:ABJ54594.1;Name=ABJ54594.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1889%3B equivalent gene in S.pneumoniae R6 %3D spr1705%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=amiD;locus_tag=SPD_1669;product=oligopeptide ABC transporter%2C permease protein AmiD;protein_id=ABJ54594.1;transl_table=11
CP000410.2	Genbank	gene	1682963	1684459	.	-	.	ID=gene-SPD_1670;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=SPD_1670
CP000410.2	Genbank	CDS	1682963	1684459	.	-	0	ID=cds-ABJ55383.1;Parent=gene-SPD_1670;Dbxref=NCBI_GP:ABJ55383.1;Name=ABJ55383.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1890%3B equivalent gene in S.pneumoniae R6 %3D spr1706%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=amiC;locus_tag=SPD_1670;product=oligopeptide ABC transporter%2C permease protein AmiC;protein_id=ABJ55383.1;transl_table=11
CP000410.2	Genbank	gene	1684526	1686505	.	-	.	ID=gene-SPD_1671;Name=amiA;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=SPD_1671
CP000410.2	Genbank	CDS	1684526	1686505	.	-	0	ID=cds-ABJ53651.1;Parent=gene-SPD_1671;Dbxref=NCBI_GP:ABJ53651.1;Name=ABJ53651.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1891%3B equivalent gene in S.pneumoniae R6 %3D spr1707%3B identified by match to protein family HMM PF00496;gbkey=CDS;gene=amiA;locus_tag=SPD_1671;product=oligopeptide ABC transporter%2C oligopeptide-binding protein AmiA;protein_id=ABJ53651.1;transl_table=11
CP000410.2	Genbank	gene	1687192	1688385	.	-	.	ID=gene-SPD_1672;Name=SPD_1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1672
CP000410.2	Genbank	CDS	1687192	1688385	.	-	0	ID=cds-ABJ55016.1;Parent=gene-SPD_1672;Dbxref=NCBI_GP:ABJ55016.1;Name=ABJ55016.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1893%3B equivalent gene in S.pneumoniae R6 %3D spr1708%3B identified by match to protein family HMM PF04932;gbkey=CDS;locus_tag=SPD_1672;product=membrane protein%2C putative;protein_id=ABJ55016.1;transl_table=11
CP000410.2	Genbank	gene	1688523	1689965	.	-	.	ID=gene-SPD_1673;Name=gtfA;gbkey=Gene;gene=gtfA;gene_biotype=protein_coding;locus_tag=SPD_1673
CP000410.2	Genbank	CDS	1688523	1689965	.	-	0	ID=cds-ABJ53943.1;Parent=gene-SPD_1673;Dbxref=NCBI_GP:ABJ53943.1;Name=ABJ53943.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1894%3B equivalent gene in S.pneumoniae R6 %3D spr1709%3B identified by match to protein family HMM PF00128;gbkey=CDS;gene=gtfA;locus_tag=SPD_1673;product=sucrose phosphorylase;protein_id=ABJ53943.1;transl_table=11
CP000410.2	Genbank	gene	1690149	1690316	.	-	.	ID=gene-SPD_1674;Name=SPD_1674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1674
CP000410.2	Genbank	CDS	1690149	1690316	.	-	0	ID=cds-ABJ55226.1;Parent=gene-SPD_1674;Dbxref=NCBI_GP:ABJ55226.1;Name=ABJ55226.1;gbkey=CDS;locus_tag=SPD_1674;product=hypothetical protein;protein_id=ABJ55226.1;transl_table=11
CP000410.2	Genbank	gene	1690323	1691156	.	-	.	ID=gene-SPD_1675;Name=rafG;gbkey=Gene;gene=rafG;gene_biotype=protein_coding;locus_tag=SPD_1675
CP000410.2	Genbank	CDS	1690323	1691156	.	-	0	ID=cds-ABJ54515.1;Parent=gene-SPD_1675;Dbxref=NCBI_GP:ABJ54515.1;Name=ABJ54515.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1895%3B equivalent gene in S.pneumoniae R6 %3D spr1710%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=rafG;locus_tag=SPD_1675;product=sugar ABC transporter%2C permease protein;protein_id=ABJ54515.1;transl_table=11
CP000410.2	Genbank	gene	1691170	1692036	.	-	.	ID=gene-SPD_1676;Name=rafF;gbkey=Gene;gene=rafF;gene_biotype=protein_coding;locus_tag=SPD_1676
CP000410.2	Genbank	CDS	1691170	1692036	.	-	0	ID=cds-ABJ55384.1;Parent=gene-SPD_1676;Dbxref=NCBI_GP:ABJ55384.1;Name=ABJ55384.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1896%3B equivalent gene in S.pneumoniae R6 %3D spr1711%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=rafF;locus_tag=SPD_1676;product=sugar ABC transporter%2C permease protein;protein_id=ABJ55384.1;transl_table=11
CP000410.2	Genbank	gene	1692050	1693309	.	-	.	ID=gene-SPD_1677;Name=rafE;gbkey=Gene;gene=rafE;gene_biotype=protein_coding;locus_tag=SPD_1677
CP000410.2	Genbank	CDS	1692050	1693309	.	-	0	ID=cds-ABJ54715.1;Parent=gene-SPD_1677;Dbxref=NCBI_GP:ABJ54715.1;Name=ABJ54715.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1897%3B equivalent gene in S.pneumoniae R6 %3D spr1712%3B identified by match to protein family HMM PF01547;gbkey=CDS;gene=rafE;locus_tag=SPD_1677;product=sugar ABC transporter%2C sugar-binding protein;protein_id=ABJ54715.1;transl_table=11
CP000410.2	Genbank	gene	1693401	1695563	.	-	.	ID=gene-SPD_1678;Name=aga;gbkey=Gene;gene=aga;gene_biotype=protein_coding;locus_tag=SPD_1678
CP000410.2	Genbank	CDS	1693401	1695563	.	-	0	ID=cds-ABJ53692.1;Parent=gene-SPD_1678;Dbxref=NCBI_GP:ABJ53692.1;Name=ABJ53692.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1898%3B equivalent gene in S.pneumoniae R6 %3D spr1713%3B identified by match to protein family HMM PF02065;gbkey=CDS;gene=aga;locus_tag=SPD_1678;product=alpha-galactosidase AgaN;protein_id=ABJ53692.1;transl_table=11
CP000410.2	Genbank	gene	1695671	1696531	.	+	.	ID=gene-SPD_1679;Name=msmR;gbkey=Gene;gene=msmR;gene_biotype=protein_coding;locus_tag=SPD_1679
CP000410.2	Genbank	CDS	1695671	1696531	.	+	0	ID=cds-ABJ54829.1;Parent=gene-SPD_1679;Dbxref=NCBI_GP:ABJ54829.1;Name=ABJ54829.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1899%3B equivalent gene in S.pneumoniae R6 %3D spr1714%3B identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311;gbkey=CDS;gene=msmR;locus_tag=SPD_1679;product=msm operon regulatory protein MsmR;protein_id=ABJ54829.1;transl_table=11
CP000410.2	Genbank	gene	1696528	1697463	.	+	.	ID=gene-SPD_1680;Name=SPD_1680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1680
CP000410.2	Genbank	CDS	1696528	1697463	.	+	0	ID=cds-ABJ54013.1;Parent=gene-SPD_1680;Dbxref=NCBI_GP:ABJ54013.1;Name=ABJ54013.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1900%3B equivalent gene in S.pneumoniae R6 %3D spr1715%3B identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM TIGR00121;gbkey=CDS;locus_tag=SPD_1680;product=biotin--acetyl-CoA-carboxylase ligase;protein_id=ABJ54013.1;transl_table=11
CP000410.2	Genbank	pseudogene	1697671	1698108	.	+	.	ID=gene-SPD_1681;Name=SPD_1681;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0836%3B equivalent gene in S.pneumoniae R6 %3D spr1716. The gene is identicle in R6%2C but not TIGR4%3B IS1167%2C transposase%2C internal deletion;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1681;pseudo=true
CP000410.2	Genbank	gene	1698315	1698402	.	-	.	ID=gene-SPD_1682;Name=SPD_1682;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1682
CP000410.2	Genbank	tRNA	1698315	1698402	.	-	.	ID=rna-SPD_1682;Parent=gene-SPD_1682;gbkey=tRNA;locus_tag=SPD_1682;product=tRNA-Ser
CP000410.2	Genbank	exon	1698315	1698402	.	-	.	ID=exon-SPD_1682-1;Parent=rna-SPD_1682;gbkey=tRNA;locus_tag=SPD_1682;product=tRNA-Ser
CP000410.2	Genbank	gene	1698409	1698482	.	-	.	ID=gene-SPD_1683;Name=SPD_1683;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1683
CP000410.2	Genbank	tRNA	1698409	1698482	.	-	.	ID=rna-SPD_1683;Parent=gene-SPD_1683;gbkey=tRNA;locus_tag=SPD_1683;product=tRNA-Ile
CP000410.2	Genbank	exon	1698409	1698482	.	-	.	ID=exon-SPD_1683-1;Parent=rna-SPD_1683;gbkey=tRNA;locus_tag=SPD_1683;product=tRNA-Ile
CP000410.2	Genbank	gene	1698518	1698588	.	-	.	ID=gene-SPD_1684;Name=SPD_1684;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1684
CP000410.2	Genbank	tRNA	1698518	1698588	.	-	.	ID=rna-SPD_1684;Parent=gene-SPD_1684;gbkey=tRNA;locus_tag=SPD_1684;product=tRNA-Gly
CP000410.2	Genbank	exon	1698518	1698588	.	-	.	ID=exon-SPD_1684-1;Parent=rna-SPD_1684;gbkey=tRNA;locus_tag=SPD_1684;product=tRNA-Gly
CP000410.2	Genbank	gene	1698608	1698680	.	-	.	ID=gene-SPD_1685;Name=SPD_1685;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1685
CP000410.2	Genbank	tRNA	1698608	1698680	.	-	.	ID=rna-SPD_1685;Parent=gene-SPD_1685;gbkey=tRNA;locus_tag=SPD_1685;product=tRNA-Phe
CP000410.2	Genbank	exon	1698608	1698680	.	-	.	ID=exon-SPD_1685-1;Parent=rna-SPD_1685;gbkey=tRNA;locus_tag=SPD_1685;product=tRNA-Phe
CP000410.2	Genbank	gene	1698684	1698757	.	-	.	ID=gene-SPD_1686;Name=SPD_1686;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1686
CP000410.2	Genbank	tRNA	1698684	1698757	.	-	.	ID=rna-SPD_1686;Parent=gene-SPD_1686;gbkey=tRNA;locus_tag=SPD_1686;product=tRNA-Met
CP000410.2	Genbank	exon	1698684	1698757	.	-	.	ID=exon-SPD_1686-1;Parent=rna-SPD_1686;gbkey=tRNA;locus_tag=SPD_1686;product=tRNA-Met
CP000410.2	Genbank	gene	1698771	1698860	.	-	.	ID=gene-SPD_1687;Name=SPD_1687;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1687
CP000410.2	Genbank	tRNA	1698771	1698860	.	-	.	ID=rna-SPD_1687;Parent=gene-SPD_1687;gbkey=tRNA;locus_tag=SPD_1687;product=tRNA-Ser
CP000410.2	Genbank	exon	1698771	1698860	.	-	.	ID=exon-SPD_1687-1;Parent=rna-SPD_1687;gbkey=tRNA;locus_tag=SPD_1687;product=tRNA-Ser
CP000410.2	Genbank	gene	1698871	1698944	.	-	.	ID=gene-SPD_1688;Name=SPD_1688;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1688
CP000410.2	Genbank	tRNA	1698871	1698944	.	-	.	ID=rna-SPD_1688;Parent=gene-SPD_1688;gbkey=tRNA;locus_tag=SPD_1688;product=tRNA-Met
CP000410.2	Genbank	exon	1698871	1698944	.	-	.	ID=exon-SPD_1688-1;Parent=rna-SPD_1688;gbkey=tRNA;locus_tag=SPD_1688;product=tRNA-Met
CP000410.2	Genbank	gene	1698958	1699031	.	-	.	ID=gene-SPD_1689;Name=SPD_1689;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1689
CP000410.2	Genbank	tRNA	1698958	1699031	.	-	.	ID=rna-SPD_1689;Parent=gene-SPD_1689;gbkey=tRNA;locus_tag=SPD_1689;product=tRNA-Met
CP000410.2	Genbank	exon	1698958	1699031	.	-	.	ID=exon-SPD_1689-1;Parent=rna-SPD_1689;gbkey=tRNA;locus_tag=SPD_1689;product=tRNA-Met
CP000410.2	Genbank	gene	1699037	1699110	.	-	.	ID=gene-SPD_1690;Name=SPD_1690;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1690
CP000410.2	Genbank	tRNA	1699037	1699110	.	-	.	ID=rna-SPD_1690;Parent=gene-SPD_1690;gbkey=tRNA;locus_tag=SPD_1690;product=tRNA-Pro
CP000410.2	Genbank	exon	1699037	1699110	.	-	.	ID=exon-SPD_1690-1;Parent=rna-SPD_1690;gbkey=tRNA;locus_tag=SPD_1690;product=tRNA-Pro
CP000410.2	Genbank	gene	1699126	1699199	.	-	.	ID=gene-SPD_1691;Name=SPD_1691;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1691
CP000410.2	Genbank	tRNA	1699126	1699199	.	-	.	ID=rna-SPD_1691;Parent=gene-SPD_1691;gbkey=tRNA;locus_tag=SPD_1691;product=tRNA-Arg
CP000410.2	Genbank	exon	1699126	1699199	.	-	.	ID=exon-SPD_1691-1;Parent=rna-SPD_1691;gbkey=tRNA;locus_tag=SPD_1691;product=tRNA-Arg
CP000410.2	Genbank	gene	1699209	1699294	.	-	.	ID=gene-SPD_1692;Name=SPD_1692;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1692
CP000410.2	Genbank	tRNA	1699209	1699294	.	-	.	ID=rna-SPD_1692;Parent=gene-SPD_1692;gbkey=tRNA;locus_tag=SPD_1692;product=tRNA-Leu
CP000410.2	Genbank	exon	1699209	1699294	.	-	.	ID=exon-SPD_1692-1;Parent=rna-SPD_1692;gbkey=tRNA;locus_tag=SPD_1692;product=tRNA-Leu
CP000410.2	Genbank	gene	1699302	1699373	.	-	.	ID=gene-SPD_1693;Name=SPD_1693;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1693
CP000410.2	Genbank	tRNA	1699302	1699373	.	-	.	ID=rna-SPD_1693;Parent=gene-SPD_1693;gbkey=tRNA;locus_tag=SPD_1693;product=tRNA-Gly
CP000410.2	Genbank	exon	1699302	1699373	.	-	.	ID=exon-SPD_1693-1;Parent=rna-SPD_1693;gbkey=tRNA;locus_tag=SPD_1693;product=tRNA-Gly
CP000410.2	Genbank	gene	1699396	1699468	.	-	.	ID=gene-SPD_1694;Name=SPD_1694;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1694
CP000410.2	Genbank	tRNA	1699396	1699468	.	-	.	ID=rna-SPD_1694;Parent=gene-SPD_1694;gbkey=tRNA;locus_tag=SPD_1694;product=tRNA-Thr
CP000410.2	Genbank	exon	1699396	1699468	.	-	.	ID=exon-SPD_1694-1;Parent=rna-SPD_1694;gbkey=tRNA;locus_tag=SPD_1694;product=tRNA-Thr
CP000410.2	Genbank	gene	1699487	1699568	.	-	.	ID=gene-SPD_1695;Name=SPD_1695;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1695
CP000410.2	Genbank	tRNA	1699487	1699568	.	-	.	ID=rna-SPD_1695;Parent=gene-SPD_1695;gbkey=tRNA;locus_tag=SPD_1695;product=tRNA-Leu
CP000410.2	Genbank	exon	1699487	1699568	.	-	.	ID=exon-SPD_1695-1;Parent=rna-SPD_1695;gbkey=tRNA;locus_tag=SPD_1695;product=tRNA-Leu
CP000410.2	Genbank	gene	1699574	1699646	.	-	.	ID=gene-SPD_1696;Name=SPD_1696;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1696
CP000410.2	Genbank	tRNA	1699574	1699646	.	-	.	ID=rna-SPD_1696;Parent=gene-SPD_1696;gbkey=tRNA;locus_tag=SPD_1696;product=tRNA-Lys
CP000410.2	Genbank	exon	1699574	1699646	.	-	.	ID=exon-SPD_1696-1;Parent=rna-SPD_1696;gbkey=tRNA;locus_tag=SPD_1696;product=tRNA-Lys
CP000410.2	Genbank	gene	1699671	1699743	.	-	.	ID=gene-SPD_1697;Name=SPD_1697;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1697
CP000410.2	Genbank	tRNA	1699671	1699743	.	-	.	ID=rna-SPD_1697;Parent=gene-SPD_1697;gbkey=tRNA;locus_tag=SPD_1697;product=tRNA-Asp
CP000410.2	Genbank	exon	1699671	1699743	.	-	.	ID=exon-SPD_1697-1;Parent=rna-SPD_1697;gbkey=tRNA;locus_tag=SPD_1697;product=tRNA-Asp
CP000410.2	Genbank	gene	1699746	1699818	.	-	.	ID=gene-SPD_1698;Name=SPD_1698;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1698
CP000410.2	Genbank	tRNA	1699746	1699818	.	-	.	ID=rna-SPD_1698;Parent=gene-SPD_1698;gbkey=tRNA;locus_tag=SPD_1698;product=tRNA-Val
CP000410.2	Genbank	exon	1699746	1699818	.	-	.	ID=exon-SPD_1698-1;Parent=rna-SPD_1698;gbkey=tRNA;locus_tag=SPD_1698;product=tRNA-Val
CP000410.2	Genbank	gene	1699823	1699938	.	-	.	ID=gene-SPD_1699;Name=rrfB;gbkey=Gene;gene=rrfB;gene_biotype=rRNA;locus_tag=SPD_1699
CP000410.2	Genbank	rRNA	1699823	1699938	.	-	.	ID=rna-SPD_1699;Parent=gene-SPD_1699;gbkey=rRNA;gene=rrfB;locus_tag=SPD_1699;product=5S ribosomal RNA
CP000410.2	Genbank	exon	1699823	1699938	.	-	.	ID=exon-SPD_1699-1;Parent=rna-SPD_1699;gbkey=rRNA;gene=rrfB;locus_tag=SPD_1699;product=5S ribosomal RNA
CP000410.2	Genbank	gene	1700015	1702916	.	-	.	ID=gene-SPD_1700;Name=rrlB;gbkey=Gene;gene=rrlB;gene_biotype=rRNA;locus_tag=SPD_1700
CP000410.2	Genbank	rRNA	1700015	1702916	.	-	.	ID=rna-SPD_1700;Parent=gene-SPD_1700;gbkey=rRNA;gene=rrlB;locus_tag=SPD_1700;product=23S ribosomal RNA
CP000410.2	Genbank	exon	1700015	1702916	.	-	.	ID=exon-SPD_1700-1;Parent=rna-SPD_1700;gbkey=rRNA;gene=rrlB;locus_tag=SPD_1700;product=23S ribosomal RNA
CP000410.2	Genbank	gene	1703041	1703113	.	-	.	ID=gene-SPD_1701;Name=SPD_1701;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1701
CP000410.2	Genbank	tRNA	1703041	1703113	.	-	.	ID=rna-SPD_1701;Parent=gene-SPD_1701;gbkey=tRNA;locus_tag=SPD_1701;product=tRNA-Ala
CP000410.2	Genbank	exon	1703041	1703113	.	-	.	ID=exon-SPD_1701-1;Parent=rna-SPD_1701;gbkey=tRNA;locus_tag=SPD_1701;product=tRNA-Ala
CP000410.2	Genbank	gene	1703240	1704697	.	-	.	ID=gene-SPD_1702;Name=rrsB;gbkey=Gene;gene=rrsB;gene_biotype=rRNA;locus_tag=SPD_1702
CP000410.2	Genbank	rRNA	1703240	1704697	.	-	.	ID=rna-SPD_1702;Parent=gene-SPD_1702;gbkey=rRNA;gene=rrsB;locus_tag=SPD_1702;product=16S ribosomal RNA
CP000410.2	Genbank	exon	1703240	1704697	.	-	.	ID=exon-SPD_1702-1;Parent=rna-SPD_1702;gbkey=rRNA;gene=rrsB;locus_tag=SPD_1702;product=16S ribosomal RNA
CP000410.2	Genbank	gene	1704963	1705034	.	-	.	ID=gene-SPD_1703;Name=SPD_1703;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1703
CP000410.2	Genbank	tRNA	1704963	1705034	.	-	.	ID=rna-SPD_1703;Parent=gene-SPD_1703;gbkey=tRNA;locus_tag=SPD_1703;product=tRNA-Glu
CP000410.2	Genbank	exon	1704963	1705034	.	-	.	ID=exon-SPD_1703-1;Parent=rna-SPD_1703;gbkey=tRNA;locus_tag=SPD_1703;product=tRNA-Glu
CP000410.2	Genbank	gene	1705096	1706451	.	-	.	ID=gene-SPD_1704;Name=rumA-2;gbkey=Gene;gene=rumA-2;gene_biotype=protein_coding;locus_tag=SPD_1704
CP000410.2	Genbank	CDS	1705096	1706451	.	-	0	ID=cds-ABJ54719.1;Parent=gene-SPD_1704;Dbxref=NCBI_GP:ABJ54719.1;Name=ABJ54719.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1901%3B equivalent gene in S.pneumoniae R6 %3D spr1717%3B identified by match to protein family HMM PF01938%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479;gbkey=CDS;gene=rumA-2;locus_tag=SPD_1704;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=ABJ54719.1;transl_table=11
CP000410.2	Genbank	gene	1706489	1707265	.	+	.	ID=gene-SPD_1705;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=SPD_1705
CP000410.2	Genbank	CDS	1706489	1707265	.	+	0	ID=cds-ABJ54577.1;Parent=gene-SPD_1705;Dbxref=NCBI_GP:ABJ54577.1;Name=ABJ54577.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1902%3B equivalent gene in S.pneumoniae R6 %3D spr1718%3B identified by match to protein family HMM PF02631;gbkey=CDS;gene=recX;locus_tag=SPD_1705;product=regulatory protein RecX;protein_id=ABJ54577.1;transl_table=11
CP000410.2	Genbank	gene	1707354	1707887	.	+	.	ID=gene-SPD_1706;Name=SPD_1706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1706
CP000410.2	Genbank	CDS	1707354	1707887	.	+	0	ID=cds-ABJ54739.1;Parent=gene-SPD_1706;Dbxref=NCBI_GP:ABJ54739.1;Name=ABJ54739.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1903%3B equivalent gene in S.pneumoniae R6 %3D spr1719%3B identified by match to protein family HMM PF04167;gbkey=CDS;locus_tag=SPD_1706;product=hypothetical protein;protein_id=ABJ54739.1;transl_table=11
CP000410.2	Genbank	gene	1708241	1708447	.	-	.	ID=gene-SPD_1707;Name=SPD_1707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1707
CP000410.2	Genbank	CDS	1708241	1708447	.	-	0	ID=cds-ABJ54266.1;Parent=gene-SPD_1707;Dbxref=NCBI_GP:ABJ54266.1;Name=ABJ54266.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1904%3B equivalent gene in S.pneumoniae R6 %3D spr1720;gbkey=CDS;locus_tag=SPD_1707;product=hypothetical protein;protein_id=ABJ54266.1;transl_table=11
CP000410.2	Genbank	gene	1708607	1709836	.	+	.	ID=gene-SPD_1708;Name=SPD_1708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1708
CP000410.2	Genbank	CDS	1708607	1709836	.	+	0	ID=cds-ABJ55089.1;Parent=gene-SPD_1708;Dbxref=NCBI_GP:ABJ55089.1;Name=ABJ55089.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1262%3B equivalent gene in S.pneumoniae R6 %3D spr1721%3B identified by match to protein family HMM PF01610;gbkey=CDS;locus_tag=SPD_1708;product=IS1167%2C transposase;protein_id=ABJ55089.1;transl_table=11
CP000410.2	Genbank	gene	1709935	1711557	.	-	.	ID=gene-SPD_1709;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=SPD_1709
CP000410.2	Genbank	CDS	1709935	1711557	.	-	0	ID=cds-ABJ54932.1;Parent=gene-SPD_1709;Dbxref=NCBI_GP:ABJ54932.1;Name=ABJ54932.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1906%3B equivalent gene in S.pneumoniae R6 %3D spr1722%3B identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348;gbkey=CDS;gene=groL;locus_tag=SPD_1709;product=chaperonin GroEL;protein_id=ABJ54932.1;transl_table=11
CP000410.2	Genbank	gene	1711573	1711857	.	-	.	ID=gene-SPD_1710;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SPD_1710
CP000410.2	Genbank	CDS	1711573	1711857	.	-	0	ID=cds-ABJ55225.1;Parent=gene-SPD_1710;Dbxref=NCBI_GP:ABJ55225.1;Name=ABJ55225.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1907%3B equivalent gene in S.pneumoniae R6 %3D spr1723%3B identified by match to protein family HMM PF00166;gbkey=CDS;gene=groES;locus_tag=SPD_1710;product=chaperonin%2C 10 kDa;protein_id=ABJ55225.1;transl_table=11
CP000410.2	Genbank	gene	1712013	1712408	.	-	.	ID=gene-SPD_1711;Name=SPD_1711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1711
CP000410.2	Genbank	CDS	1712013	1712408	.	-	0	ID=cds-ABJ54110.1;Parent=gene-SPD_1711;Dbxref=NCBI_GP:ABJ54110.1;Name=ABJ54110.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1908%3B equivalent gene in S.pneumoniae R6 %3D spr1724%3B identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;locus_tag=SPD_1711;product=single-strand binding protein family protein;protein_id=ABJ54110.1;transl_table=11
CP000410.2	Genbank	gene	1712486	1713247	.	-	.	ID=gene-SPD_1712;Name=SPD_1712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1712
CP000410.2	Genbank	CDS	1712486	1713247	.	-	0	ID=cds-ABJ54658.1;Parent=gene-SPD_1712;Dbxref=NCBI_GP:ABJ54658.1;Name=ABJ54658.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1909%3B equivalent gene in S.pneumoniae R6 %3D spr1725%3B identified by match to protein family HMM PF00106;gbkey=CDS;locus_tag=SPD_1712;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=ABJ54658.1;transl_table=11
CP000410.2	Genbank	gene	1713280	1713906	.	-	.	ID=gene-SPD_1713;Name=SPD_1713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1713
CP000410.2	Genbank	CDS	1713280	1713906	.	-	0	ID=cds-ABJ53907.1;Parent=gene-SPD_1713;Dbxref=NCBI_GP:ABJ53907.1;Name=ABJ53907.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1910%3B equivalent gene in S.pneumoniae R6 %3D spr1726%3B identified by match to protein family HMM PF01588;gbkey=CDS;locus_tag=SPD_1713;product=hypothetical protein;protein_id=ABJ53907.1;transl_table=11
CP000410.2	Genbank	gene	1713922	1714239	.	-	.	ID=gene-SPD_1714;Name=SPD_1714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1714
CP000410.2	Genbank	CDS	1713922	1714239	.	-	0	ID=cds-ABJ55380.1;Parent=gene-SPD_1714;Dbxref=NCBI_GP:ABJ55380.1;Name=ABJ55380.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1911%3B equivalent gene in S.pneumoniae R6 %3D spr1727%3B identified by match to protein family HMM PF00085;gbkey=CDS;locus_tag=SPD_1714;product=thioredoxin family protein;protein_id=ABJ55380.1;transl_table=11
CP000410.2	Genbank	gene	1714236	1714535	.	-	.	ID=gene-SPD_1715;Name=SPD_1715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1715
CP000410.2	Genbank	CDS	1714236	1714535	.	-	0	ID=cds-ABJ54543.1;Parent=gene-SPD_1715;Dbxref=NCBI_GP:ABJ54543.1;Name=ABJ54543.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1912%3B equivalent gene in S.pneumoniae R6 %3D spr1728;gbkey=CDS;locus_tag=SPD_1715;product=hypothetical protein;protein_id=ABJ54543.1;transl_table=11
CP000410.2	Genbank	gene	1714872	1715063	.	-	.	ID=gene-SPD_1716;Name=SPD_1716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1716
CP000410.2	Genbank	CDS	1714872	1715063	.	-	0	ID=cds-ABJ53953.1;Parent=gene-SPD_1716;Dbxref=NCBI_GP:ABJ53953.1;Name=ABJ53953.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1729%3B identified by match to protein family HMM PF01473;gbkey=CDS;locus_tag=SPD_1716;product=hypothetical protein;protein_id=ABJ53953.1;transl_table=11
CP000410.2	Genbank	gene	1715224	1715898	.	-	.	ID=gene-SPD_1717;Name=SPD_1717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1717
CP000410.2	Genbank	CDS	1715224	1715898	.	-	0	ID=cds-ABJ54807.1;Parent=gene-SPD_1717;Dbxref=NCBI_GP:ABJ54807.1;Name=ABJ54807.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1914%3B equivalent gene in S.pneumoniae R6 %3D spr1730;gbkey=CDS;locus_tag=SPD_1717;product=membrane protein%2C putative;protein_id=ABJ54807.1;transl_table=11
CP000410.2	Genbank	gene	1715904	1716350	.	-	.	ID=gene-SPD_1718;Name=SPD_1718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1718
CP000410.2	Genbank	CDS	1715904	1716350	.	-	0	ID=cds-ABJ54289.1;Parent=gene-SPD_1718;Dbxref=NCBI_GP:ABJ54289.1;Name=ABJ54289.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1915%3B equivalent gene in S.pneumoniae R6 %3D spr1731%3B identified by match to protein family HMM PF04397;gbkey=CDS;locus_tag=SPD_1718;product=hypothetical protein;protein_id=ABJ54289.1;transl_table=11
CP000410.2	Genbank	gene	1716464	1716967	.	-	.	ID=gene-SPD_1719;Name=SPD_1719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1719
CP000410.2	Genbank	CDS	1716464	1716967	.	-	0	ID=cds-ABJ54853.1;Parent=gene-SPD_1719;Dbxref=NCBI_GP:ABJ54853.1;Name=ABJ54853.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1916%3B equivalent gene in S.pneumoniae R6 %3D spr1732%3B identified by match to protein family HMM PF01569;gbkey=CDS;locus_tag=SPD_1719;product=PAP2 family protein;protein_id=ABJ54853.1;transl_table=11
CP000410.2	Genbank	gene	1716964	1717326	.	-	.	ID=gene-SPD_1720;Name=SPD_1720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1720
CP000410.2	Genbank	CDS	1716964	1717326	.	-	0	ID=cds-ABJ53955.1;Parent=gene-SPD_1720;Dbxref=NCBI_GP:ABJ53955.1;Name=ABJ53955.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1917%3B equivalent gene in S.pneumoniae R6 %3D spr1733;gbkey=CDS;locus_tag=SPD_1720;product=hypothetical protein;protein_id=ABJ53955.1;transl_table=11
CP000410.2	Genbank	gene	1717392	1718423	.	-	.	ID=gene-SPD_1721;Name=SPD_1721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1721
CP000410.2	Genbank	CDS	1717392	1718423	.	-	0	ID=cds-ABJ54317.1;Parent=gene-SPD_1721;Dbxref=NCBI_GP:ABJ54317.1;Name=ABJ54317.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1918%3B equivalent gene in S.pneumoniae R6 %3D spr1734%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1721;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54317.1;transl_table=11
CP000410.2	Genbank	pseudogene	1718430	1719251	.	-	.	ID=gene-SPD_1722;Name=SPD_1722;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1919%3B equivalent gene in S.pneumoniae R6 %3D spr1736. This gene and the R6 version have a point mutation relative to the TIGR4 version%3B ABC transporter%2C permease protein%2C point mutation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1722;pseudo=true
CP000410.2	Genbank	gene	1719268	1719381	.	-	.	ID=gene-SPD_1723;Name=SPD_1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1723
CP000410.2	Genbank	CDS	1719268	1719381	.	-	0	ID=cds-ABJ54392.1;Parent=gene-SPD_1723;Dbxref=NCBI_GP:ABJ54392.1;Name=ABJ54392.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1723;product=hypothetical protein;protein_id=ABJ54392.1;transl_table=11
CP000410.2	Genbank	pseudogene	1719393	1719737	.	-	.	ID=gene-SPD_1724;Name=SPD_1724;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1920%3B equivalent gene in S.pneumoniae R6 %3D spr1737.The gene is identically degenerate in R6%3B transcriptional regulator%2C MarR family protein%2C degenerate%3B identified by match to protein family HMM PF01047;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1724;pseudo=true
CP000410.2	Genbank	gene	1719861	1720577	.	-	.	ID=gene-SPD_1725;Name=SPD_1725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1725
CP000410.2	Genbank	CDS	1719861	1720577	.	-	0	ID=cds-ABJ55474.1;Parent=gene-SPD_1725;Dbxref=NCBI_GP:ABJ55474.1;Name=ABJ55474.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1922%3B equivalent gene in S.pneumoniae R6 %3D spr1738%3B identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033;gbkey=CDS;locus_tag=SPD_1725;product=conserved hypothetical protein TIGR01033;protein_id=ABJ55474.1;transl_table=11
CP000410.2	Genbank	gene	1721458	1722873	.	-	.	ID=gene-SPD_1726;Name=ply;gbkey=Gene;gene=ply;gene_biotype=protein_coding;locus_tag=SPD_1726
CP000410.2	Genbank	CDS	1721458	1722873	.	-	0	ID=cds-ABJ53672.1;Parent=gene-SPD_1726;Dbxref=NCBI_GP:ABJ53672.1;Name=ABJ53672.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1923%3B equivalent gene in S.pneumoniae R6 %3D spr1739%3B identified by match to protein family HMM PF01289;gbkey=CDS;gene=ply;locus_tag=SPD_1726;product=pneumolysin;protein_id=ABJ53672.1;transl_table=11
CP000410.2	Genbank	gene	1722884	1723294	.	-	.	ID=gene-SPD_1727;Name=SPD_1727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1727
CP000410.2	Genbank	CDS	1722884	1723294	.	-	0	ID=cds-ABJ54887.1;Parent=gene-SPD_1727;Dbxref=NCBI_GP:ABJ54887.1;Name=ABJ54887.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1924%3B equivalent gene in S.pneumoniae R6 %3D spr1740;gbkey=CDS;locus_tag=SPD_1727;product=hypothetical protein;protein_id=ABJ54887.1;transl_table=11
CP000410.2	Genbank	gene	1723287	1723895	.	-	.	ID=gene-SPD_1728;Name=SPD_1728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1728
CP000410.2	Genbank	CDS	1723287	1723895	.	-	0	ID=cds-ABJ53779.1;Parent=gene-SPD_1728;Dbxref=NCBI_GP:ABJ53779.1;Name=ABJ53779.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1925%3B equivalent gene in S.pneumoniae R6 %3D spr1741;gbkey=CDS;locus_tag=SPD_1728;product=hypothetical protein;protein_id=ABJ53779.1;transl_table=11
CP000410.2	Genbank	gene	1723908	1724366	.	-	.	ID=gene-SPD_1729;Name=SPD_1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1729
CP000410.2	Genbank	CDS	1723908	1724366	.	-	0	ID=cds-ABJ54170.1;Parent=gene-SPD_1729;Dbxref=NCBI_GP:ABJ54170.1;Name=ABJ54170.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1926%3B equivalent gene in S.pneumoniae R6 %3D spr1742 This gene has a frameshift at amaino acid 96 relative to its R6 equivalent gene but not its TIGR4 equivalent gene.;gbkey=CDS;locus_tag=SPD_1729;product=hypothetical protein;protein_id=ABJ54170.1;transl_table=11
CP000410.2	Genbank	pseudogene	1724491	1724890	.	+	.	ID=gene-SPD_1730;Name=SPD_1730;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1086%3B equivalent gene in S.pneumoniae R6 %3D spr1745%3B IS1381%2C transposase OrfB%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1730;pseudo=true
CP000410.2	Genbank	gene	1725655	1725915	.	-	.	ID=gene-SPD_1731;Name=SPD_1731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1731
CP000410.2	Genbank	CDS	1725655	1725915	.	-	0	ID=cds-ABJ54893.1;Parent=gene-SPD_1731;Dbxref=NCBI_GP:ABJ54893.1;Name=ABJ54893.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1930%3B equivalent gene in S.pneumoniae R6 %3D spr1746;gbkey=CDS;locus_tag=SPD_1731;product=hypothetical protein;protein_id=ABJ54893.1;transl_table=11
CP000410.2	Genbank	gene	1725974	1726525	.	-	.	ID=gene-SPD_1732;Name=SPD_1732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1732
CP000410.2	Genbank	CDS	1725974	1726525	.	-	0	ID=cds-ABJ54897.1;Parent=gene-SPD_1732;Dbxref=NCBI_GP:ABJ54897.1;Name=ABJ54897.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1931%3B equivalent gene in S.pneumoniae R6 %3D spr1747;gbkey=CDS;locus_tag=SPD_1732;product=hypothetical protein;protein_id=ABJ54897.1;transl_table=11
CP000410.2	Genbank	gene	1726515	1726712	.	-	.	ID=gene-SPD_1733;Name=SPD_1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1733
CP000410.2	Genbank	CDS	1726515	1726712	.	-	0	ID=cds-ABJ55260.1;Parent=gene-SPD_1733;Dbxref=NCBI_GP:ABJ55260.1;Name=ABJ55260.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1932%3B equivalent gene in S.pneumoniae R6 %3D spr1748;gbkey=CDS;locus_tag=SPD_1733;product=hypothetical protein;protein_id=ABJ55260.1;transl_table=11
CP000410.2	Genbank	gene	1726716	1727510	.	-	.	ID=gene-SPD_1734;Name=SPD_1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1734
CP000410.2	Genbank	CDS	1726716	1727510	.	-	0	ID=cds-ABJ55304.1;Parent=gene-SPD_1734;Dbxref=NCBI_GP:ABJ55304.1;Name=ABJ55304.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1933%3B equivalent gene in S.pneumoniae R6 %3D spr1749;gbkey=CDS;locus_tag=SPD_1734;product=hypothetical protein;protein_id=ABJ55304.1;transl_table=11
CP000410.2	Genbank	gene	1727918	1728343	.	-	.	ID=gene-SPD_1735;Name=SPD_1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1735
CP000410.2	Genbank	CDS	1727918	1728343	.	-	0	ID=cds-ABJ54494.1;Parent=gene-SPD_1735;Dbxref=NCBI_GP:ABJ54494.1;Name=ABJ54494.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1934%3B equivalent gene in S.pneumoniae R6 %3D spr1750;gbkey=CDS;locus_tag=SPD_1735;product=hypothetical protein;protein_id=ABJ54494.1;transl_table=11
CP000410.2	Genbank	gene	1728472	1728831	.	-	.	ID=gene-SPD_1736;Name=SPD_1736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1736
CP000410.2	Genbank	CDS	1728472	1728831	.	-	0	ID=cds-ABJ54463.1;Parent=gene-SPD_1736;Dbxref=NCBI_GP:ABJ54463.1;Name=ABJ54463.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1935%3B equivalent gene in S.pneumoniae R6 %3D spr1751;gbkey=CDS;locus_tag=SPD_1736;product=hypothetical protein;protein_id=ABJ54463.1;transl_table=11
CP000410.2	Genbank	gene	1729602	1730558	.	-	.	ID=gene-SPD_1737;Name=lytA;gbkey=Gene;gene=lytA;gene_biotype=protein_coding;locus_tag=SPD_1737
CP000410.2	Genbank	CDS	1729602	1730558	.	-	0	ID=cds-ABJ55073.1;Parent=gene-SPD_1737;Dbxref=NCBI_GP:ABJ55073.1;Name=ABJ55073.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1937%3B equivalent gene in S.pneumoniae R6 %3D spr1754%3B identified by match to protein family HMM PF01473%3B match to protein family HMM PF01510;gbkey=CDS;gene=lytA;locus_tag=SPD_1737;product=autolysin/N-acetylmuramoyl-L-alanine amidase;protein_id=ABJ55073.1;transl_table=11
CP000410.2	Genbank	gene	1730934	1732304	.	-	.	ID=gene-SPD_1738;Name=dinF;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=SPD_1738
CP000410.2	Genbank	CDS	1730934	1732304	.	-	0	ID=cds-ABJ55308.1;Parent=gene-SPD_1738;Dbxref=NCBI_GP:ABJ55308.1;Name=ABJ55308.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1939%3B equivalent gene in S.pneumoniae R6 %3D spr1756%3B identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;gene=dinF;locus_tag=SPD_1738;product=MATE efflux family protein DinF;protein_id=ABJ55308.1;transl_table=11
CP000410.2	Genbank	gene	1732611	1733777	.	-	.	ID=gene-SPD_1739;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SPD_1739
CP000410.2	Genbank	CDS	1732611	1733777	.	-	0	ID=cds-ABJ54571.1;Parent=gene-SPD_1739;Dbxref=NCBI_GP:ABJ54571.1;Name=ABJ54571.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1940%3B equivalent gene in S.pneumoniae R6 %3D spr1757%3B identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012;gbkey=CDS;gene=recA;locus_tag=SPD_1739;product=recA protein;protein_id=ABJ54571.1;transl_table=11
CP000410.2	Genbank	gene	1733832	1735088	.	-	.	ID=gene-SPD_1740;Name=cinA;gbkey=Gene;gene=cinA;gene_biotype=protein_coding;locus_tag=SPD_1740
CP000410.2	Genbank	CDS	1733832	1735088	.	-	0	ID=cds-ABJ54079.1;Parent=gene-SPD_1740;Dbxref=NCBI_GP:ABJ54079.1;Name=ABJ54079.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1941%3B equivalent gene in S.pneumoniae R6 %3D spr1758%3B identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200;gbkey=CDS;gene=cinA;locus_tag=SPD_1740;product=competence-damage protein (Exported protein 10)%2C putative;protein_id=ABJ54079.1;transl_table=11
CP000410.2	Genbank	gene	1735173	1736189	.	-	.	ID=gene-SPD_1741;Name=SPD_1741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1741
CP000410.2	Genbank	CDS	1735173	1736189	.	-	0	ID=cds-ABJ54672.1;Parent=gene-SPD_1741;Dbxref=NCBI_GP:ABJ54672.1;Name=ABJ54672.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1942%3B equivalent gene in S.pneumoniae R6 %3D spr1759%3B identified by match to protein family HMM PF03816%3B match to protein family HMM TIGR00350;gbkey=CDS;locus_tag=SPD_1741;product=transcriptional regulator%2C putative;protein_id=ABJ54672.1;transl_table=11
CP000410.2	Genbank	gene	1736197	1736715	.	-	.	ID=gene-SPD_1742;Name=SPD_1742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1742
CP000410.2	Genbank	CDS	1736197	1736715	.	-	0	ID=cds-ABJ55055.1;Parent=gene-SPD_1742;Dbxref=NCBI_GP:ABJ55055.1;Name=ABJ55055.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1943%3B equivalent gene in S.pneumoniae R6 %3D spr1760%3B identified by match to protein family HMM PF00583;gbkey=CDS;locus_tag=SPD_1742;product=acetyltransferase%2C GNAT family protein;protein_id=ABJ55055.1;transl_table=11
CP000410.2	Genbank	gene	1736705	1737148	.	-	.	ID=gene-SPD_1743;Name=SPD_1743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1743
CP000410.2	Genbank	CDS	1736705	1737148	.	-	0	ID=cds-ABJ54209.1;Parent=gene-SPD_1743;Dbxref=NCBI_GP:ABJ54209.1;Name=ABJ54209.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1944%3B equivalent gene in S.pneumoniae R6 %3D spr1761%3B identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150;gbkey=CDS;locus_tag=SPD_1743;product=hypothetical protein;protein_id=ABJ54209.1;transl_table=11
CP000410.2	Genbank	gene	1737234	1737854	.	-	.	ID=gene-SPD_1744;Name=SPD_1744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1744
CP000410.2	Genbank	CDS	1737234	1737854	.	-	0	ID=cds-ABJ54530.1;Parent=gene-SPD_1744;Dbxref=NCBI_GP:ABJ54530.1;Name=ABJ54530.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1945%3B equivalent gene in S.pneumoniae R6 %3D spr1762;gbkey=CDS;locus_tag=SPD_1744;product=lipoprotein%2C putative;protein_id=ABJ54530.1;transl_table=11
CP000410.2	Genbank	gene	1738237	1739100	.	-	.	ID=gene-SPD_1745;Name=SPD_1745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1745
CP000410.2	Genbank	CDS	1738237	1739100	.	-	0	ID=cds-ABJ55500.1;Parent=gene-SPD_1745;Dbxref=NCBI_GP:ABJ55500.1;Name=ABJ55500.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1946%3B equivalent gene in S.pneumoniae R6 %3D spr1763%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_1745;product=transcriptional regulator PlcR%2C putative;protein_id=ABJ55500.1;transl_table=11
CP000410.2	Genbank	gene	1739292	1739462	.	+	.	ID=gene-SPD_1746;Name=SPD_1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1746
CP000410.2	Genbank	CDS	1739292	1739462	.	+	0	ID=cds-ABJ54446.1;Parent=gene-SPD_1746;Dbxref=NCBI_GP:ABJ54446.1;Name=ABJ54446.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1947%3B equivalent gene in S.pneumoniae R6 %3D spr1764;gbkey=CDS;locus_tag=SPD_1746;product=hypothetical protein;protein_id=ABJ54446.1;transl_table=11
CP000410.2	Genbank	gene	1739565	1739789	.	+	.	ID=gene-SPD_1747;Name=SPD_1747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1747
CP000410.2	Genbank	CDS	1739565	1739789	.	+	0	ID=cds-ABJ54603.1;Parent=gene-SPD_1747;Dbxref=NCBI_GP:ABJ54603.1;Name=ABJ54603.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1948%3B equivalent gene in S.pneumoniae R6 %3D spr1765;gbkey=CDS;locus_tag=SPD_1747;product=hypothetical protein;protein_id=ABJ54603.1;transl_table=11
CP000410.2	Genbank	gene	1739796	1739984	.	+	.	ID=gene-SPD_1748;Name=SPD_1748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1748
CP000410.2	Genbank	CDS	1739796	1739984	.	+	0	ID=cds-ABJ53859.1;Parent=gene-SPD_1748;Dbxref=NCBI_GP:ABJ53859.1;Name=ABJ53859.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1949%3B equivalent gene in S.pneumoniae R6 %3D spr1766;gbkey=CDS;locus_tag=SPD_1748;product=hypothetical protein;protein_id=ABJ53859.1;transl_table=11
CP000410.2	Genbank	gene	1740100	1743090	.	+	.	ID=gene-SPD_1749;Name=SPD_1749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1749
CP000410.2	Genbank	CDS	1740100	1743090	.	+	0	ID=cds-ABJ54936.1;Parent=gene-SPD_1749;Dbxref=NCBI_GP:ABJ54936.1;Name=ABJ54936.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1950%3B equivalent gene in S.pneumoniae R6 %3D spr1767%3B identified by match to protein family HMM PF05147;gbkey=CDS;locus_tag=SPD_1749;product=bacteriocin formation protein%2C putative;protein_id=ABJ54936.1;transl_table=11
CP000410.2	Genbank	gene	1743440	1744144	.	+	.	ID=gene-SPD_1750;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=SPD_1750
CP000410.2	Genbank	CDS	1743440	1744144	.	+	0	ID=cds-ABJ55148.1;Parent=gene-SPD_1750;Dbxref=NCBI_GP:ABJ55148.1;Name=ABJ55148.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1951%3B equivalent gene in S.pneumoniae R6 %3D spr1768 The crystal structure of this protein is published%3B identified by similarity to GB:1SQS_A;gbkey=CDS;gene=wrbA;locus_tag=SPD_1750;product=multimeric flavodoxin WrbA (general function prediction only);protein_id=ABJ55148.1;transl_table=11
CP000410.2	Genbank	gene	1744125	1745054	.	+	.	ID=gene-SPD_1751;Name=SPD_1751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1751
CP000410.2	Genbank	CDS	1744125	1745054	.	+	0	ID=cds-ABJ54321.1;Parent=gene-SPD_1751;Dbxref=NCBI_GP:ABJ54321.1;Name=ABJ54321.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1952%3B equivalent gene in S.pneumoniae R6 %3D spr1769;gbkey=CDS;locus_tag=SPD_1751;product=membrane protein%2C putative;protein_id=ABJ54321.1;transl_table=11
CP000410.2	Genbank	gene	1745051	1747159	.	+	.	ID=gene-SPD_1752;Name=SPD_1752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1752
CP000410.2	Genbank	CDS	1745051	1747159	.	+	0	ID=cds-ABJ55102.1;Parent=gene-SPD_1752;Dbxref=NCBI_GP:ABJ55102.1;Name=ABJ55102.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1953%3B equivalent gene in S.pneumoniae R6 %3D spr1770%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664%3B match to protein family HMM PF03412;gbkey=CDS;locus_tag=SPD_1752;product=toxin secretion ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ55102.1;transl_table=11
CP000410.2	Genbank	gene	1747183	1748922	.	+	.	ID=gene-SPD_1753;Name=SPD_1753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1753
CP000410.2	Genbank	CDS	1747183	1748922	.	+	0	ID=cds-ABJ54257.1;Parent=gene-SPD_1753;Dbxref=NCBI_GP:ABJ54257.1;Name=ABJ54257.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1954%3B equivalent gene in S.pneumoniae R6 %3D spr1771%3B identified by match to protein family HMM PF00082;gbkey=CDS;locus_tag=SPD_1753;product=serine protease%2C subtilase family protein;protein_id=ABJ54257.1;transl_table=11
CP000410.2	Genbank	gene	1748973	1749740	.	+	.	ID=gene-SPD_1754;Name=SPD_1754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1754
CP000410.2	Genbank	CDS	1748973	1749740	.	+	0	ID=cds-ABJ55317.1;Parent=gene-SPD_1754;Dbxref=NCBI_GP:ABJ55317.1;Name=ABJ55317.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1956%3B equivalent gene in S.pneumoniae R6 %3D spr1772%3B identified by match to protein family HMM PF07242;gbkey=CDS;locus_tag=SPD_1754;product=hypothetical protein;protein_id=ABJ55317.1;transl_table=11
CP000410.2	Genbank	gene	1749742	1750374	.	+	.	ID=gene-SPD_1755;Name=SPD_1755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1755
CP000410.2	Genbank	CDS	1749742	1750374	.	+	0	ID=cds-ABJ54507.1;Parent=gene-SPD_1755;Dbxref=NCBI_GP:ABJ54507.1;Name=ABJ54507.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1957%3B equivalent gene in S.pneumoniae R6 %3D spr1773%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1755;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54507.1;transl_table=11
CP000410.2	Genbank	gene	1750532	1750693	.	+	.	ID=gene-SPD_1756;Name=SPD_1756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1756
CP000410.2	Genbank	CDS	1750532	1750693	.	+	0	ID=cds-ABJ54928.1;Parent=gene-SPD_1756;Dbxref=NCBI_GP:ABJ54928.1;Name=ABJ54928.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1958%3B equivalent gene in S.pneumoniae R6 %3D spr1774;gbkey=CDS;locus_tag=SPD_1756;product=hypothetical protein;protein_id=ABJ54928.1;transl_table=11
CP000410.2	Genbank	gene	1751320	1751733	.	-	.	ID=gene-SPD_1757;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=SPD_1757
CP000410.2	Genbank	CDS	1751320	1751733	.	-	0	ID=cds-ABJ55238.1;Parent=gene-SPD_1757;Dbxref=NCBI_GP:ABJ55238.1;Name=ABJ55238.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1959%3B equivalent gene in S.pneumoniae R6 %3D spr1775%3B identified by match to protein family HMM PF00334;gbkey=CDS;gene=ndk;locus_tag=SPD_1757;product=nucleoside diphosphate kinase;protein_id=ABJ55238.1;transl_table=11
CP000410.2	Genbank	gene	1751844	1755521	.	-	.	ID=gene-SPD_1758;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=SPD_1758
CP000410.2	Genbank	CDS	1751844	1755521	.	-	0	ID=cds-ABJ54020.1;Parent=gene-SPD_1758;Dbxref=NCBI_GP:ABJ54020.1;Name=ABJ54020.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1960%3B equivalent gene in S.pneumoniae R6 %3D spr1776%3B identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386;gbkey=CDS;gene=rpoC;locus_tag=SPD_1758;product=DNA-directed RNA polymerase%2C beta' subunit;protein_id=ABJ54020.1;transl_table=11
CP000410.2	Genbank	gene	1755554	1759165	.	-	.	ID=gene-SPD_1759;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SPD_1759
CP000410.2	Genbank	CDS	1755554	1759165	.	-	0	ID=cds-ABJ54731.1;Parent=gene-SPD_1759;Dbxref=NCBI_GP:ABJ54731.1;Name=ABJ54731.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1961%3B equivalent gene in S.pneumoniae R6 %3D spr1777%3B identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013;gbkey=CDS;gene=rpoB;locus_tag=SPD_1759;product=DNA-directed RNA polymerase%2C beta subunit;protein_id=ABJ54731.1;transl_table=11
CP000410.2	Genbank	gene	1759581	1759651	.	+	.	ID=gene-SPD_1760;Name=SPD_1760;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1760
CP000410.2	Genbank	tRNA	1759581	1759651	.	+	.	ID=rna-SPD_1760;Parent=gene-SPD_1760;gbkey=tRNA;locus_tag=SPD_1760;product=tRNA-Cys
CP000410.2	Genbank	exon	1759581	1759651	.	+	.	ID=exon-SPD_1760-1;Parent=rna-SPD_1760;gbkey=tRNA;locus_tag=SPD_1760;product=tRNA-Cys
CP000410.2	Genbank	gene	1759849	1761180	.	-	.	ID=gene-SPD_1761;Name=SPD_1761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1761
CP000410.2	Genbank	CDS	1759849	1761180	.	-	0	ID=cds-ABJ53833.1;Parent=gene-SPD_1761;Dbxref=NCBI_GP:ABJ53833.1;Name=ABJ53833.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1963%3B equivalent gene in S.pneumoniae R6 %3D spr1778%3B identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;locus_tag=SPD_1761;product=CBS domain membrane protein;protein_id=ABJ53833.1;transl_table=11
CP000410.2	Genbank	gene	1761409	1762233	.	-	.	ID=gene-SPD_1762;Name=SPD_1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1762
CP000410.2	Genbank	CDS	1761409	1762233	.	-	0	ID=cds-ABJ54727.1;Parent=gene-SPD_1762;Dbxref=NCBI_GP:ABJ54727.1;Name=ABJ54727.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1964%3B equivalent gene in S.pneumoniae R6 %3D spr1779%3B identified by match to protein family HMM PF01223;gbkey=CDS;locus_tag=SPD_1762;product=DNA-entry nuclease;protein_id=ABJ54727.1;transl_table=11
CP000410.2	Genbank	gene	1762272	1762478	.	-	.	ID=gene-SPD_1763;Name=SPD_1763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1763
CP000410.2	Genbank	CDS	1762272	1762478	.	-	0	ID=cds-ABJ54574.1;Parent=gene-SPD_1763;Dbxref=NCBI_GP:ABJ54574.1;Name=ABJ54574.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1965%3B equivalent gene in S.pneumoniae R6 %3D spr1780;gbkey=CDS;locus_tag=SPD_1763;product=hypothetical protein;protein_id=ABJ54574.1;transl_table=11
CP000410.2	Genbank	gene	1762453	1763736	.	-	.	ID=gene-SPD_1764;Name=murA-2;gbkey=Gene;gene=murA-2;gene_biotype=protein_coding;locus_tag=SPD_1764
CP000410.2	Genbank	CDS	1762453	1763736	.	-	0	ID=cds-ABJ55139.1;Parent=gene-SPD_1764;Dbxref=NCBI_GP:ABJ55139.1;Name=ABJ55139.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1966%3B equivalent gene in S.pneumoniae R6 %3D spr1781%3B identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072;gbkey=CDS;gene=murA-2;locus_tag=SPD_1764;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=ABJ55139.1;transl_table=11
CP000410.2	Genbank	gene	1764048	1765085	.	-	.	ID=gene-SPD_1765;Name=SPD_1765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1765
CP000410.2	Genbank	CDS	1764048	1765085	.	-	0	ID=cds-ABJ54306.1;Parent=gene-SPD_1765;Dbxref=NCBI_GP:ABJ54306.1;Name=ABJ54306.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1967%3B equivalent gene in S.pneumoniae R6 %3D spr1782;gbkey=CDS;locus_tag=SPD_1765;product=hypothetical protein;protein_id=ABJ54306.1;transl_table=11
CP000410.2	Genbank	gene	1765069	1765557	.	-	.	ID=gene-SPD_1766;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SPD_1766
CP000410.2	Genbank	CDS	1765069	1765557	.	-	0	ID=cds-ABJ53939.1;Parent=gene-SPD_1766;Dbxref=NCBI_GP:ABJ53939.1;Name=ABJ53939.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1968%3B equivalent gene in S.pneumoniae R6 %3D spr1783%3B identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR01510;gbkey=CDS;gene=coaD;locus_tag=SPD_1766;product=pantetheine-phosphate adenylyltransferase;protein_id=ABJ53939.1;transl_table=11
CP000410.2	Genbank	gene	1765547	1766086	.	-	.	ID=gene-SPD_1767;Name=SPD_1767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1767
CP000410.2	Genbank	CDS	1765547	1766086	.	-	0	ID=cds-ABJ55001.1;Parent=gene-SPD_1767;Dbxref=NCBI_GP:ABJ55001.1;Name=ABJ55001.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1969%3B equivalent gene in S.pneumoniae R6 %3D spr1784%3B identified by match to protein family HMM PF03602%3B match to protein family HMM TIGR00095;gbkey=CDS;locus_tag=SPD_1767;product=type II DNA modification methyltransferase%2C putative;protein_id=ABJ55001.1;transl_table=11
CP000410.2	Genbank	gene	1766151	1767143	.	-	.	ID=gene-SPD_1768;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=SPD_1768
CP000410.2	Genbank	CDS	1766151	1767143	.	-	0	ID=cds-ABJ54080.1;Parent=gene-SPD_1768;Dbxref=NCBI_GP:ABJ54080.1;Name=ABJ54080.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1970%3B equivalent gene in S.pneumoniae R6 %3D spr1785%3B identified by match to protein family HMM PF03590%3B match to protein family HMM TIGR00669;gbkey=CDS;gene=asnA;locus_tag=SPD_1768;product=aspartate--ammonia ligase;protein_id=ABJ54080.1;transl_table=11
CP000410.2	Genbank	gene	1767123	1767281	.	+	.	ID=gene-SPD_1770;Name=SPD_1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1770
CP000410.2	Genbank	CDS	1767123	1767281	.	+	0	ID=cds-ABJ54227.1;Parent=gene-SPD_1770;Dbxref=NCBI_GP:ABJ54227.1;Name=ABJ54227.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1971%3B equivalent gene in S.pneumoniae R6 %3D spr1786;gbkey=CDS;locus_tag=SPD_1770;product=hypothetical protein;protein_id=ABJ54227.1;transl_table=11
CP000410.2	Genbank	gene	1767255	1767962	.	-	.	ID=gene-SPD_1769;Name=SPD_1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1769
CP000410.2	Genbank	CDS	1767255	1767962	.	-	0	ID=cds-ABJ55161.1;Parent=gene-SPD_1769;Dbxref=NCBI_GP:ABJ55161.1;Name=ABJ55161.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1972%3B equivalent gene in S.pneumoniae R6 %3D spr1787%3B identified by match to protein family HMM PF01027;gbkey=CDS;locus_tag=SPD_1769;product=membrane protein%2C putative;protein_id=ABJ55161.1;transl_table=11
CP000410.2	Genbank	gene	1767994	1768734	.	-	.	ID=gene-SPD_1771;Name=SPD_1771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1771
CP000410.2	Genbank	CDS	1767994	1768734	.	-	0	ID=cds-ABJ55205.1;Parent=gene-SPD_1771;Dbxref=NCBI_GP:ABJ55205.1;Name=ABJ55205.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1973%3B equivalent gene in S.pneumoniae R6 %3D spr1788%3B identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032;gbkey=CDS;locus_tag=SPD_1771;product=SpoU rRNA Methylase family protein;protein_id=ABJ55205.1;transl_table=11
CP000410.2	Genbank	gene	1768783	1769046	.	+	.	ID=gene-SPD_1772;Name=SPD_1772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1772
CP000410.2	Genbank	CDS	1768783	1769046	.	+	0	ID=cds-ABJ54526.1;Parent=gene-SPD_1772;Dbxref=NCBI_GP:ABJ54526.1;Name=ABJ54526.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1974%3B equivalent gene in S.pneumoniae R6 %3D spr1789%3B identified by match to protein family HMM PF00708;gbkey=CDS;locus_tag=SPD_1772;product=acylphosphatase%2C putative;protein_id=ABJ54526.1;transl_table=11
CP000410.2	Genbank	gene	1769124	1770050	.	+	.	ID=gene-SPD_1773;Name=SPD_1773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1773
CP000410.2	Genbank	CDS	1769124	1770050	.	+	0	ID=cds-ABJ55358.1;Parent=gene-SPD_1773;Dbxref=NCBI_GP:ABJ55358.1;Name=ABJ55358.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1975%3B equivalent gene in S.pneumoniae R6 %3D spr1790%3B identified by match to protein family HMM PF02096;gbkey=CDS;locus_tag=SPD_1773;product=SpoIIIJ family protein;protein_id=ABJ55358.1;transl_table=11
CP000410.2	Genbank	gene	1770125	1770919	.	-	.	ID=gene-SPD_1774;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SPD_1774
CP000410.2	Genbank	CDS	1770125	1770919	.	-	0	ID=cds-ABJ54552.1;Parent=gene-SPD_1774;Dbxref=NCBI_GP:ABJ54552.1;Name=ABJ54552.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1976%3B equivalent gene in S.pneumoniae R6 %3D spr1791%3B identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=SPD_1774;product=pyruvate formate-lyase activating enzyme;protein_id=ABJ54552.1;transl_table=11
CP000410.2	Genbank	gene	1771045	1772295	.	-	.	ID=gene-SPD_1775;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=SPD_1775
CP000410.2	Genbank	CDS	1771045	1772295	.	-	0	ID=cds-ABJ54599.1;Parent=gene-SPD_1775;Dbxref=NCBI_GP:ABJ54599.1;Name=ABJ54599.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1978%3B equivalent gene in S.pneumoniae R6 %3D spr1792%3B identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784;gbkey=CDS;gene=lysA;locus_tag=SPD_1775;product=diaminopimelate decarboxylase;protein_id=ABJ54599.1;transl_table=11
CP000410.2	Genbank	gene	1772362	1773189	.	-	.	ID=gene-SPD_1776;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=SPD_1776
CP000410.2	Genbank	CDS	1772362	1773189	.	-	0	ID=cds-ABJ53777.1;Parent=gene-SPD_1776;Dbxref=NCBI_GP:ABJ53777.1;Name=ABJ53777.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1979%3B equivalent gene in S.pneumoniae R6 %3D spr1793%3B identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01743;gbkey=CDS;gene=purR;locus_tag=SPD_1776;product=pur operon repressor PurR;protein_id=ABJ53777.1;transl_table=11
CP000410.2	Genbank	gene	1773456	1774409	.	-	.	ID=gene-SPD_1777;Name=cbf1;gbkey=Gene;gene=cbf1;gene_biotype=protein_coding;locus_tag=SPD_1777
CP000410.2	Genbank	CDS	1773456	1774409	.	-	0	ID=cds-ABJ54890.1;Parent=gene-SPD_1777;Dbxref=NCBI_GP:ABJ54890.1;Name=ABJ54890.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1980%3B equivalent gene in S.pneumoniae R6 %3D spr1794%3B identified by match to protein family HMM PF01336;gbkey=CDS;gene=cbf1;locus_tag=SPD_1777;product=cmp-binding-factor 1;protein_id=ABJ54890.1;transl_table=11
CP000410.2	Genbank	gene	1774387	1775643	.	-	.	ID=gene-SPD_1778;Name=SPD_1778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1778
CP000410.2	Genbank	CDS	1774387	1775643	.	-	0	ID=cds-ABJ55104.1;Parent=gene-SPD_1778;Dbxref=NCBI_GP:ABJ55104.1;Name=ABJ55104.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1981%3B equivalent gene in S.pneumoniae R6 %3D spr1795%3B identified by match to protein family HMM PF02646;gbkey=CDS;locus_tag=SPD_1778;product=hypothetical protein;protein_id=ABJ55104.1;transl_table=11
CP000410.2	Genbank	gene	1775645	1776307	.	-	.	ID=gene-SPD_1779;Name=SPD_1779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1779
CP000410.2	Genbank	CDS	1775645	1776307	.	-	0	ID=cds-ABJ54885.1;Parent=gene-SPD_1779;Dbxref=NCBI_GP:ABJ54885.1;Name=ABJ54885.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1982%3B equivalent gene in S.pneumoniae R6 %3D spr1796%3B identified by match to protein family HMM PF04263%3B match to protein family HMM PF04265%3B match to protein family HMM TIGR01378;gbkey=CDS;locus_tag=SPD_1779;product=thiamine pyrophosphokinase;protein_id=ABJ54885.1;transl_table=11
CP000410.2	Genbank	gene	1776270	1776926	.	-	.	ID=gene-SPD_1780;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=SPD_1780
CP000410.2	Genbank	CDS	1776270	1776926	.	-	0	ID=cds-ABJ53836.1;Parent=gene-SPD_1780;Dbxref=NCBI_GP:ABJ53836.1;Name=ABJ53836.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1983%3B equivalent gene in S.pneumoniae R6 %3D spr1797%3B identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163;gbkey=CDS;gene=rpe;locus_tag=SPD_1780;product=ribulose-phosphate 3-epimerase;protein_id=ABJ53836.1;transl_table=11
CP000410.2	Genbank	gene	1776937	1777815	.	-	.	ID=gene-SPD_1781;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=SPD_1781
CP000410.2	Genbank	CDS	1776937	1777815	.	-	0	ID=cds-ABJ54798.1;Parent=gene-SPD_1781;Dbxref=NCBI_GP:ABJ54798.1;Name=ABJ54798.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1984%3B equivalent gene in S.pneumoniae R6 %3D spr1798%3B identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157;gbkey=CDS;gene=rsgA;locus_tag=SPD_1781;product=ribosome small subunit-dependent GTPase A;protein_id=ABJ54798.1;transl_table=11
CP000410.2	Genbank	gene	1777817	1778689	.	-	.	ID=gene-SPD_1782;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=SPD_1782
CP000410.2	Genbank	CDS	1777817	1778689	.	-	0	ID=cds-ABJ54063.1;Parent=gene-SPD_1782;Dbxref=NCBI_GP:ABJ54063.1;Name=ABJ54063.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1985%3B equivalent gene in S.pneumoniae R6 %3D spr1799%3B identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755;gbkey=CDS;gene=ksgA;locus_tag=SPD_1782;product=dimethyladenosine transferase;protein_id=ABJ54063.1;transl_table=11
CP000410.2	Genbank	gene	1778820	1779128	.	-	.	ID=gene-SPD_1783;Name=SPD_1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1783
CP000410.2	Genbank	CDS	1778820	1779128	.	-	0	ID=cds-ABJ55494.1;Parent=gene-SPD_1783;Dbxref=NCBI_GP:ABJ55494.1;Name=ABJ55494.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1986%3B equivalent gene in S.pneumoniae R6 %3D spr1800;gbkey=CDS;locus_tag=SPD_1783;product=hypothetical protein;protein_id=ABJ55494.1;transl_table=11
CP000410.2	Genbank	gene	1779121	1779762	.	-	.	ID=gene-SPD_1784;Name=SPD_1784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1784
CP000410.2	Genbank	CDS	1779121	1779762	.	-	0	ID=cds-ABJ53812.1;Parent=gene-SPD_1784;Dbxref=NCBI_GP:ABJ53812.1;Name=ABJ53812.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1987%3B equivalent gene in S.pneumoniae R6 %3D spr1801%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1784;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ53812.1;transl_table=11
CP000410.2	Genbank	gene	1779764	1781794	.	-	.	ID=gene-SPD_1785;Name=SPD_1785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1785
CP000410.2	Genbank	CDS	1779764	1781794	.	-	0	ID=cds-ABJ55063.1;Parent=gene-SPD_1785;Dbxref=NCBI_GP:ABJ55063.1;Name=ABJ55063.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1988%3B equivalent gene in S.pneumoniae R6 %3D spr1802%3B identified by match to protein family HMM PF07242%3B match to protein family HMM TIGR01654;gbkey=CDS;locus_tag=SPD_1785;product=immunity protein%2C putative;protein_id=ABJ55063.1;transl_table=11
CP000410.2	Genbank	gene	1782063	1782962	.	-	.	ID=gene-SPD_1786;Name=SPD_1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1786
CP000410.2	Genbank	CDS	1782063	1782962	.	-	0	ID=cds-ABJ54484.1;Parent=gene-SPD_1786;Dbxref=NCBI_GP:ABJ54484.1;Name=ABJ54484.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1989%3B equivalent gene in S.pneumoniae R6 %3D spr1803%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_1786;product=transcriptional regulator PlcR%2C putative;protein_id=ABJ54484.1;transl_table=11
CP000410.2	Genbank	gene	1783034	1783594	.	-	.	ID=gene-SPD_1787;Name=SPD_1787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1787
CP000410.2	Genbank	CDS	1783034	1783594	.	-	0	ID=cds-ABJ54033.1;Parent=gene-SPD_1787;Dbxref=NCBI_GP:ABJ54033.1;Name=ABJ54033.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1990%3B equivalent gene in S.pneumoniae R6 %3D spr1804%3B identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334;gbkey=CDS;locus_tag=SPD_1787;product=primase-related protein;protein_id=ABJ54033.1;transl_table=11
CP000410.2	Genbank	gene	1783594	1784367	.	-	.	ID=gene-SPD_1788;Name=SPD_1788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1788
CP000410.2	Genbank	CDS	1783594	1784367	.	-	0	ID=cds-ABJ54901.1;Parent=gene-SPD_1788;Dbxref=NCBI_GP:ABJ54901.1;Name=ABJ54901.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1991%3B equivalent gene in S.pneumoniae R6 %3D spr1805%3B identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010;gbkey=CDS;locus_tag=SPD_1788;product=hydrolase%2C TatD family protein;protein_id=ABJ54901.1;transl_table=11
CP000410.2	Genbank	gene	1784673	1785338	.	-	.	ID=gene-SPD_1789;Name=SPD_1789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1789
CP000410.2	Genbank	CDS	1784673	1785338	.	-	0	ID=cds-ABJ54587.1;Parent=gene-SPD_1789;Dbxref=NCBI_GP:ABJ54587.1;Name=ABJ54587.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1992%3B equivalent gene in S.pneumoniae R6 %3D spr1806%3B identified by match to protein family HMM PF00746%3B match to protein family HMM TIGR01167;gbkey=CDS;locus_tag=SPD_1789;product=cell wall surface anchor family protein;protein_id=ABJ54587.1;transl_table=11
CP000410.2	Genbank	gene	1785601	1785735	.	-	.	ID=gene-SPD_1790;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SPD_1790
CP000410.2	Genbank	CDS	1785601	1785735	.	-	0	ID=cds-ABJ55375.1;Parent=gene-SPD_1790;Dbxref=NCBI_GP:ABJ55375.1;Name=ABJ55375.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1993%3B equivalent gene in S.pneumoniae R6 %3D spr1807%3B identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030;gbkey=CDS;gene=rpmH;locus_tag=SPD_1790;product=ribosomal protein L34;protein_id=ABJ55375.1;transl_table=11
CP000410.2	Genbank	gene	1785880	1787094	.	-	.	ID=gene-SPD_1791;Name=SPD_1791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1791
CP000410.2	Genbank	CDS	1785880	1787094	.	-	0	ID=cds-ABJ54499.1;Parent=gene-SPD_1791;Dbxref=NCBI_GP:ABJ54499.1;Name=ABJ54499.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1994%3B equivalent gene in S.pneumoniae R6 %3D spr1808%3B identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=SPD_1791;product=aminotransferase%2C class I;protein_id=ABJ54499.1;transl_table=11
CP000410.2	Genbank	gene	1787250	1787543	.	-	.	ID=gene-SPD_1792;Name=SPD_1792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1792
CP000410.2	Genbank	CDS	1787250	1787543	.	-	0	ID=cds-ABJ54616.1;Parent=gene-SPD_1792;Dbxref=NCBI_GP:ABJ54616.1;Name=ABJ54616.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1995%3B equivalent gene in S.pneumoniae R6 %3D spr1809;gbkey=CDS;locus_tag=SPD_1792;product=hypothetical protein;protein_id=ABJ54616.1;transl_table=11
CP000410.2	Genbank	gene	1787705	1788157	.	+	.	ID=gene-SPD_1793;Name=SPD_1793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1793
CP000410.2	Genbank	CDS	1787705	1788157	.	+	0	ID=cds-ABJ53712.1;Parent=gene-SPD_1793;Dbxref=NCBI_GP:ABJ53712.1;Name=ABJ53712.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1996%3B equivalent gene in S.pneumoniae R6 %3D spr1810%3B identified by match to protein family HMM PF00582;gbkey=CDS;locus_tag=SPD_1793;product=universal stress protein family protein;protein_id=ABJ53712.1;transl_table=11
CP000410.2	Genbank	gene	1788192	1789580	.	-	.	ID=gene-SPD_1794;Name=SPD_1794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1794
CP000410.2	Genbank	CDS	1788192	1789580	.	-	0	ID=cds-ABJ54844.1;Parent=gene-SPD_1794;Dbxref=NCBI_GP:ABJ54844.1;Name=ABJ54844.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1997%3B equivalent gene in S.pneumoniae R6 %3D spr1811%3B identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=SPD_1794;product=Cof family protein;protein_id=ABJ54844.1;transl_table=11
CP000410.2	Genbank	gene	1789646	1790608	.	+	.	ID=gene-SPD_1796;Name=SPD_1796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1796
CP000410.2	Genbank	CDS	1789646	1790608	.	+	0	ID=cds-ABJ54104.1;Parent=gene-SPD_1796;Dbxref=NCBI_GP:ABJ54104.1;Name=ABJ54104.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1998%3B equivalent gene in S.pneumoniae R6 %3D spr1812%3B identified by match to protein family HMM PF00710;gbkey=CDS;locus_tag=SPD_1796;product=L-asparaginase%2C putative;protein_id=ABJ54104.1;transl_table=11
CP000410.2	Genbank	gene	1790605	1790733	.	-	.	ID=gene-SPD_1795;Name=SPD_1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1795
CP000410.2	Genbank	CDS	1790605	1790733	.	-	0	ID=cds-ABJ53971.1;Parent=gene-SPD_1795;Dbxref=NCBI_GP:ABJ53971.1;Name=ABJ53971.1;gbkey=CDS;locus_tag=SPD_1795;product=hypothetical protein;protein_id=ABJ53971.1;transl_table=11
CP000410.2	Genbank	gene	1790860	1791870	.	-	.	ID=gene-SPD_1797;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=SPD_1797
CP000410.2	Genbank	CDS	1790860	1791870	.	-	0	ID=cds-ABJ55405.1;Parent=gene-SPD_1797;Dbxref=NCBI_GP:ABJ55405.1;Name=ABJ55405.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1999%3B equivalent gene in S.pneumoniae R6 %3D spr1813%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532%3B match to protein family HMM TIGR01481;gbkey=CDS;gene=ccpA;locus_tag=SPD_1797;product=catabolite control protein A;protein_id=ABJ55405.1;transl_table=11
CP000410.2	Genbank	gene	1792295	1792894	.	-	.	ID=gene-SPD_1798;Name=SPD_1798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1798
CP000410.2	Genbank	CDS	1792295	1792894	.	-	0	ID=cds-ABJ54430.1;Parent=gene-SPD_1798;Dbxref=NCBI_GP:ABJ54430.1;Name=ABJ54430.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2000%3B equivalent gene in S.pneumoniae R6 %3D spr1814%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00196;gbkey=CDS;locus_tag=SPD_1798;product=DNA-binding response regulator;protein_id=ABJ54430.1;transl_table=11
CP000410.2	Genbank	gene	1792896	1793993	.	-	.	ID=gene-SPD_1799;Name=SPD_1799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1799
CP000410.2	Genbank	CDS	1792896	1793993	.	-	0	ID=cds-ABJ53728.1;Parent=gene-SPD_1799;Dbxref=NCBI_GP:ABJ53728.1;Name=ABJ53728.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2001%3B equivalent gene in S.pneumoniae R6 %3D spr1815%3B identified by match to protein family HMM PF02518%3B match to protein family HMM PF07730;gbkey=CDS;locus_tag=SPD_1799;product=sensor histidine kinase%2C putative;protein_id=ABJ53728.1;transl_table=11
CP000410.2	Genbank	gene	1793993	1794730	.	-	.	ID=gene-SPD_1800;Name=SPD_1800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1800
CP000410.2	Genbank	CDS	1793993	1794730	.	-	0	ID=cds-ABJ54698.1;Parent=gene-SPD_1800;Dbxref=NCBI_GP:ABJ54698.1;Name=ABJ54698.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2002%3B equivalent gene in S.pneumoniae R6 %3D spr1816%3B identified by match to protein family HMM PF01061;gbkey=CDS;locus_tag=SPD_1800;product=membrane protein%2C putative;protein_id=ABJ54698.1;transl_table=11
CP000410.2	Genbank	gene	1794732	1795616	.	-	.	ID=gene-SPD_1801;Name=SPD_1801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1801
CP000410.2	Genbank	CDS	1794732	1795616	.	-	0	ID=cds-ABJ54482.1;Parent=gene-SPD_1801;Dbxref=NCBI_GP:ABJ54482.1;Name=ABJ54482.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1817%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_1801;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54482.1;transl_table=11
CP000410.2	Genbank	gene	1795603	1795797	.	-	.	ID=gene-SPD_1802;Name=SPD_1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1802
CP000410.2	Genbank	CDS	1795603	1795797	.	-	0	ID=cds-ABJ54454.1;Parent=gene-SPD_1802;Dbxref=NCBI_GP:ABJ54454.1;Name=ABJ54454.1;gbkey=CDS;locus_tag=SPD_1802;product=hypothetical protein;protein_id=ABJ54454.1;transl_table=11
CP000410.2	Genbank	gene	1795794	1795973	.	-	.	ID=gene-SPD_1803;Name=SPD_1803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1803
CP000410.2	Genbank	CDS	1795794	1795973	.	-	0	ID=cds-ABJ53653.1;Parent=gene-SPD_1803;Dbxref=NCBI_GP:ABJ53653.1;Name=ABJ53653.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1818;gbkey=CDS;locus_tag=SPD_1803;product=hypothetical protein;protein_id=ABJ53653.1;transl_table=11
CP000410.2	Genbank	gene	1796588	1796661	.	-	.	ID=gene-SPD_1804;Name=SPD_1804;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1804
CP000410.2	Genbank	tRNA	1796588	1796661	.	-	.	ID=rna-SPD_1804;Parent=gene-SPD_1804;gbkey=tRNA;locus_tag=SPD_1804;product=tRNA-Pro
CP000410.2	Genbank	exon	1796588	1796661	.	-	.	ID=exon-SPD_1804-1;Parent=rna-SPD_1804;gbkey=tRNA;locus_tag=SPD_1804;product=tRNA-Pro
CP000410.2	Genbank	gene	1796677	1796750	.	-	.	ID=gene-SPD_1805;Name=SPD_1805;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1805
CP000410.2	Genbank	tRNA	1796677	1796750	.	-	.	ID=rna-SPD_1805;Parent=gene-SPD_1805;gbkey=tRNA;locus_tag=SPD_1805;product=tRNA-Arg
CP000410.2	Genbank	exon	1796677	1796750	.	-	.	ID=exon-SPD_1805-1;Parent=rna-SPD_1805;gbkey=tRNA;locus_tag=SPD_1805;product=tRNA-Arg
CP000410.2	Genbank	gene	1796760	1796845	.	-	.	ID=gene-SPD_1806;Name=SPD_1806;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1806
CP000410.2	Genbank	tRNA	1796760	1796845	.	-	.	ID=rna-SPD_1806;Parent=gene-SPD_1806;gbkey=tRNA;locus_tag=SPD_1806;product=tRNA-Leu
CP000410.2	Genbank	exon	1796760	1796845	.	-	.	ID=exon-SPD_1806-1;Parent=rna-SPD_1806;gbkey=tRNA;locus_tag=SPD_1806;product=tRNA-Leu
CP000410.2	Genbank	gene	1796853	1796924	.	-	.	ID=gene-SPD_1807;Name=SPD_1807;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1807
CP000410.2	Genbank	tRNA	1796853	1796924	.	-	.	ID=rna-SPD_1807;Parent=gene-SPD_1807;gbkey=tRNA;locus_tag=SPD_1807;product=tRNA-Gly
CP000410.2	Genbank	exon	1796853	1796924	.	-	.	ID=exon-SPD_1807-1;Parent=rna-SPD_1807;gbkey=tRNA;locus_tag=SPD_1807;product=tRNA-Gly
CP000410.2	Genbank	gene	1796947	1797019	.	-	.	ID=gene-SPD_1808;Name=SPD_1808;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1808
CP000410.2	Genbank	tRNA	1796947	1797019	.	-	.	ID=rna-SPD_1808;Parent=gene-SPD_1808;gbkey=tRNA;locus_tag=SPD_1808;product=tRNA-Thr
CP000410.2	Genbank	exon	1796947	1797019	.	-	.	ID=exon-SPD_1808-1;Parent=rna-SPD_1808;gbkey=tRNA;locus_tag=SPD_1808;product=tRNA-Thr
CP000410.2	Genbank	gene	1797038	1797119	.	-	.	ID=gene-SPD_1809;Name=SPD_1809;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1809
CP000410.2	Genbank	tRNA	1797038	1797119	.	-	.	ID=rna-SPD_1809;Parent=gene-SPD_1809;gbkey=tRNA;locus_tag=SPD_1809;product=tRNA-Leu
CP000410.2	Genbank	exon	1797038	1797119	.	-	.	ID=exon-SPD_1809-1;Parent=rna-SPD_1809;gbkey=tRNA;locus_tag=SPD_1809;product=tRNA-Leu
CP000410.2	Genbank	gene	1797125	1797197	.	-	.	ID=gene-SPD_1810;Name=SPD_1810;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1810
CP000410.2	Genbank	tRNA	1797125	1797197	.	-	.	ID=rna-SPD_1810;Parent=gene-SPD_1810;gbkey=tRNA;locus_tag=SPD_1810;product=tRNA-Lys
CP000410.2	Genbank	exon	1797125	1797197	.	-	.	ID=exon-SPD_1810-1;Parent=rna-SPD_1810;gbkey=tRNA;locus_tag=SPD_1810;product=tRNA-Lys
CP000410.2	Genbank	gene	1797222	1797294	.	-	.	ID=gene-SPD_1811;Name=SPD_1811;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1811
CP000410.2	Genbank	tRNA	1797222	1797294	.	-	.	ID=rna-SPD_1811;Parent=gene-SPD_1811;gbkey=tRNA;locus_tag=SPD_1811;product=tRNA-Asp
CP000410.2	Genbank	exon	1797222	1797294	.	-	.	ID=exon-SPD_1811-1;Parent=rna-SPD_1811;gbkey=tRNA;locus_tag=SPD_1811;product=tRNA-Asp
CP000410.2	Genbank	gene	1797297	1797369	.	-	.	ID=gene-SPD_1812;Name=SPD_1812;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1812
CP000410.2	Genbank	tRNA	1797297	1797369	.	-	.	ID=rna-SPD_1812;Parent=gene-SPD_1812;gbkey=tRNA;locus_tag=SPD_1812;product=tRNA-Val
CP000410.2	Genbank	exon	1797297	1797369	.	-	.	ID=exon-SPD_1812-1;Parent=rna-SPD_1812;gbkey=tRNA;locus_tag=SPD_1812;product=tRNA-Val
CP000410.2	Genbank	gene	1797374	1797489	.	-	.	ID=gene-SPD_1813;Name=rrfC;gbkey=Gene;gene=rrfC;gene_biotype=rRNA;locus_tag=SPD_1813
CP000410.2	Genbank	rRNA	1797374	1797489	.	-	.	ID=rna-SPD_1813;Parent=gene-SPD_1813;gbkey=rRNA;gene=rrfC;locus_tag=SPD_1813;product=5S ribosomal RNA
CP000410.2	Genbank	exon	1797374	1797489	.	-	.	ID=exon-SPD_1813-1;Parent=rna-SPD_1813;gbkey=rRNA;gene=rrfC;locus_tag=SPD_1813;product=5S ribosomal RNA
CP000410.2	Genbank	gene	1797566	1800467	.	-	.	ID=gene-SPD_1814;Name=rrlC;gbkey=Gene;gene=rrlC;gene_biotype=rRNA;locus_tag=SPD_1814
CP000410.2	Genbank	rRNA	1797566	1800467	.	-	.	ID=rna-SPD_1814;Parent=gene-SPD_1814;gbkey=rRNA;gene=rrlC;locus_tag=SPD_1814;product=23S ribosomal RNA
CP000410.2	Genbank	exon	1797566	1800467	.	-	.	ID=exon-SPD_1814-1;Parent=rna-SPD_1814;gbkey=rRNA;gene=rrlC;locus_tag=SPD_1814;product=23S ribosomal RNA
CP000410.2	Genbank	gene	1800592	1800664	.	-	.	ID=gene-SPD_1815;Name=SPD_1815;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1815
CP000410.2	Genbank	tRNA	1800592	1800664	.	-	.	ID=rna-SPD_1815;Parent=gene-SPD_1815;gbkey=tRNA;locus_tag=SPD_1815;product=tRNA-Ala
CP000410.2	Genbank	exon	1800592	1800664	.	-	.	ID=exon-SPD_1815-1;Parent=rna-SPD_1815;gbkey=tRNA;locus_tag=SPD_1815;product=tRNA-Ala
CP000410.2	Genbank	gene	1800791	1802248	.	-	.	ID=gene-SPD_1816;Name=rrsC;gbkey=Gene;gene=rrsC;gene_biotype=rRNA;locus_tag=SPD_1816
CP000410.2	Genbank	rRNA	1800791	1802248	.	-	.	ID=rna-SPD_1816;Parent=gene-SPD_1816;gbkey=rRNA;gene=rrsC;locus_tag=SPD_1816;product=16S ribosomal RNA
CP000410.2	Genbank	exon	1800791	1802248	.	-	.	ID=exon-SPD_1816-1;Parent=rna-SPD_1816;gbkey=rRNA;gene=rrsC;locus_tag=SPD_1816;product=16S ribosomal RNA
CP000410.2	Genbank	gene	1802514	1802585	.	-	.	ID=gene-SPD_1817;Name=SPD_1817;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1817
CP000410.2	Genbank	tRNA	1802514	1802585	.	-	.	ID=rna-SPD_1817;Parent=gene-SPD_1817;gbkey=tRNA;locus_tag=SPD_1817;product=tRNA-Glu
CP000410.2	Genbank	exon	1802514	1802585	.	-	.	ID=exon-SPD_1817-1;Parent=rna-SPD_1817;gbkey=tRNA;locus_tag=SPD_1817;product=tRNA-Glu
CP000410.2	Genbank	gene	1802679	1803158	.	-	.	ID=gene-SPD_1818;Name=comX2;gbkey=Gene;gene=comX2;gene_biotype=protein_coding;locus_tag=SPD_1818
CP000410.2	Genbank	CDS	1802679	1803158	.	-	0	ID=cds-ABJ54056.1;Parent=gene-SPD_1818;Dbxref=NCBI_GP:ABJ54056.1;Name=ABJ54056.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0014%3B equivalent gene in S.pneumoniae R6 %3D spr0013;gbkey=CDS;gene=comX2;locus_tag=SPD_1818;product=transcriptional regulator ComX2;protein_id=ABJ54056.1;transl_table=11
CP000410.2	Genbank	gene	1803280	1803816	.	-	.	ID=gene-SPD_1819;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SPD_1819
CP000410.2	Genbank	CDS	1803280	1803816	.	-	0	ID=cds-ABJ53992.1;Parent=gene-SPD_1819;Dbxref=NCBI_GP:ABJ53992.1;Name=ABJ53992.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2007%3B equivalent gene in S.pneumoniae R6 %3D spr1820%3B identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922;gbkey=CDS;gene=nusG;locus_tag=SPD_1819;product=transcription termination/antitermination factor NusG;protein_id=ABJ53992.1;transl_table=11
CP000410.2	Genbank	gene	1803871	1804047	.	-	.	ID=gene-SPD_1820;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SPD_1820
CP000410.2	Genbank	CDS	1803871	1804047	.	-	0	ID=cds-ABJ55160.1;Parent=gene-SPD_1820;Dbxref=NCBI_GP:ABJ55160.1;Name=ABJ55160.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2008%3B equivalent gene in S.pneumoniae R6 %3D spr1821%3B identified by match to protein family HMM TIGR00964;gbkey=CDS;gene=secE;locus_tag=SPD_1820;product=preprotein translocase%2C SecE subunit;protein_id=ABJ55160.1;transl_table=11
CP000410.2	Genbank	gene	1804262	1806457	.	-	.	ID=gene-SPD_1821;Name=pbp2A;gbkey=Gene;gene=pbp2A;gene_biotype=protein_coding;locus_tag=SPD_1821
CP000410.2	Genbank	CDS	1804262	1806457	.	-	0	ID=cds-ABJ54295.1;Parent=gene-SPD_1821;Dbxref=NCBI_GP:ABJ54295.1;Name=ABJ54295.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2010%3B equivalent gene in S.pneumoniae R6 %3D spr1823%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;gene=pbp2A;locus_tag=SPD_1821;product=penicillin-binding protein 2A;protein_id=ABJ54295.1;transl_table=11
CP000410.2	Genbank	gene	1806544	1807419	.	+	.	ID=gene-SPD_1822;Name=SPD_1822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1822
CP000410.2	Genbank	CDS	1806544	1807419	.	+	0	ID=cds-ABJ54023.1;Parent=gene-SPD_1822;Dbxref=NCBI_GP:ABJ54023.1;Name=ABJ54023.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2011%3B equivalent gene in S.pneumoniae R6 %3D spr1824%3B identified by match to protein family HMM PF00849;gbkey=CDS;locus_tag=SPD_1822;product=ribosomal large subunit pseudouridine synthase%2C RluD subfamily protein;protein_id=ABJ54023.1;transl_table=11
CP000410.2	Genbank	gene	1807487	1808494	.	-	.	ID=gene-SPD_1823;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=SPD_1823
CP000410.2	Genbank	CDS	1807487	1808494	.	-	0	ID=cds-ABJ54738.1;Parent=gene-SPD_1823;Dbxref=NCBI_GP:ABJ54738.1;Name=ABJ54738.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2012%3B equivalent gene in S.pneumoniae R6 %3D spr1825%3B identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;locus_tag=SPD_1823;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=ABJ54738.1;transl_table=11
CP000410.2	Genbank	gene	1808671	1809633	.	-	.	ID=gene-SPD_1824;Name=SPD_1824;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1824
CP000410.2	Genbank	CDS	1808671	1809633	.	-	0	ID=cds-ABJ53911.1;Parent=gene-SPD_1824;Dbxref=NCBI_GP:ABJ53911.1;Name=ABJ53911.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2013%3B equivalent gene in S.pneumoniae R6 %3D spr1826%3B identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=SPD_1824;product=hypothetical protein;protein_id=ABJ53911.1;transl_table=11
CP000410.2	Genbank	pseudogene	1810197	1810526	.	-	.	ID=gene-SPD_1825;Name=SPD_1825;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0299%3B equivalent gene in S.pneumoniae R6 %3D spr0014%3B IS630-Spn1%2C transposase Orf1%2C truncation%3B identified by match to protein family HMM PF01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1825;pseudo=true
CP000410.2	Genbank	gene	1810657	1811529	.	-	.	ID=gene-SPD_1826;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=SPD_1826
CP000410.2	Genbank	CDS	1810657	1811529	.	-	0	ID=cds-ABJ55171.1;Parent=gene-SPD_1826;Dbxref=NCBI_GP:ABJ55171.1;Name=ABJ55171.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2016%3B equivalent gene in S.pneumoniae R6 %3D spr1829%3B identified by match to protein family HMM PF01729%3B match to protein family HMM PF02749%3B match to protein family HMM TIGR00078;gbkey=CDS;gene=nadC;locus_tag=SPD_1826;product=nicotinate-nucleotide pyrophosphorylase;protein_id=ABJ55171.1;transl_table=11
CP000410.2	Genbank	gene	1811766	1813076	.	+	.	ID=gene-SPD_1827;Name=SPD_1827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1827
CP000410.2	Genbank	CDS	1811766	1813076	.	+	0	ID=cds-ABJ55332.1;Parent=gene-SPD_1827;Dbxref=NCBI_GP:ABJ55332.1;Name=ABJ55332.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2017%3B equivalent gene in S.pneumoniae R6 %3D spr1830%3B identified by match to protein family HMM PF03600%3B match to protein family HMM PF07158;gbkey=CDS;locus_tag=SPD_1827;product=membrane protein%2C putative;protein_id=ABJ55332.1;transl_table=11
CP000410.2	Genbank	gene	1813442	1813573	.	-	.	ID=gene-SPD_1828;Name=SPD_1828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1828
CP000410.2	Genbank	CDS	1813442	1813573	.	-	0	ID=cds-ABJ54219.1;Parent=gene-SPD_1828;Dbxref=NCBI_GP:ABJ54219.1;Name=ABJ54219.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2019%3B equivalent gene in S.pneumoniae R6 %3D spr1831;gbkey=CDS;locus_tag=SPD_1828;product=hypothetical protein;protein_id=ABJ54219.1;transl_table=11
CP000410.2	Genbank	gene	1814096	1814824	.	-	.	ID=gene-SPD_1829;Name=SPD_1829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1829
CP000410.2	Genbank	CDS	1814096	1814824	.	-	0	ID=cds-ABJ54803.1;Parent=gene-SPD_1829;Dbxref=NCBI_GP:ABJ54803.1;Name=ABJ54803.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2020%3B equivalent gene in S.pneumoniae R6 %3D spr1832%3B identified by match to protein family HMM PF00392%3B match to protein family HMM PF07702;gbkey=CDS;locus_tag=SPD_1829;product=transcriptional regulator%2C GntR family protein;protein_id=ABJ54803.1;transl_table=11
CP000410.2	Genbank	gene	1814982	1816391	.	+	.	ID=gene-SPD_1830;Name=SPD_1830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1830
CP000410.2	Genbank	CDS	1814982	1816391	.	+	0	ID=cds-ABJ53669.1;Parent=gene-SPD_1830;Dbxref=NCBI_GP:ABJ53669.1;Name=ABJ53669.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2021%3B equivalent gene in S.pneumoniae R6 %3D spr1833%3B identified by match to protein family HMM PF00232;gbkey=CDS;locus_tag=SPD_1830;product=glycosyl hydrolase%2C family protein 1;protein_id=ABJ53669.1;transl_table=11
CP000410.2	Genbank	gene	1816409	1817704	.	+	.	ID=gene-SPD_1831;Name=SPD_1831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1831
CP000410.2	Genbank	CDS	1816409	1817704	.	+	0	ID=cds-ABJ53941.1;Parent=gene-SPD_1831;Dbxref=NCBI_GP:ABJ53941.1;Name=ABJ53941.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2022%3B equivalent gene in S.pneumoniae R6 %3D spr1834%3B identified by match to protein family HMM PF02378%3B match to protein family HMM TIGR00410;gbkey=CDS;locus_tag=SPD_1831;product=PTS system%2C IIC component;protein_id=ABJ53941.1;transl_table=11
CP000410.2	Genbank	gene	1817709	1818017	.	+	.	ID=gene-SPD_1832;Name=SPD_1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1832
CP000410.2	Genbank	CDS	1817709	1818017	.	+	0	ID=cds-ABJ53892.1;Parent=gene-SPD_1832;Dbxref=NCBI_GP:ABJ53892.1;Name=ABJ53892.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2023%3B equivalent gene in S.pneumoniae R6 %3D spr1835%3B identified by match to protein family HMM PF02302;gbkey=CDS;locus_tag=SPD_1832;product=PTS system%2C IIB component;protein_id=ABJ53892.1;transl_table=11
CP000410.2	Genbank	gene	1818014	1818322	.	+	.	ID=gene-SPD_1833;Name=SPD_1833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1833
CP000410.2	Genbank	CDS	1818014	1818322	.	+	0	ID=cds-ABJ55239.1;Parent=gene-SPD_1833;Dbxref=NCBI_GP:ABJ55239.1;Name=ABJ55239.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2024%3B equivalent gene in S.pneumoniae R6 %3D spr1836%3B identified by match to protein family HMM PF02255;gbkey=CDS;locus_tag=SPD_1833;product=PTS system%2C IIA component;protein_id=ABJ55239.1;transl_table=11
CP000410.2	Genbank	gene	1819230	1821881	.	-	.	ID=gene-SPD_1834;Name=SPD_1834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1834
CP000410.2	Genbank	CDS	1819230	1821881	.	-	0	ID=cds-ABJ54182.1;Parent=gene-SPD_1834;Dbxref=NCBI_GP:ABJ54182.1;Name=ABJ54182.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2026%3B equivalent gene in S.pneumoniae R6 %3D spr1837%3B identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=SPD_1834;product=alcohol dehydrogenase%2C iron-containing;protein_id=ABJ54182.1;transl_table=11
CP000410.2	Genbank	gene	1822084	1822221	.	-	.	ID=gene-SPD_1835;Name=SPD_1835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1835
CP000410.2	Genbank	CDS	1822084	1822221	.	-	0	ID=cds-ABJ55490.1;Parent=gene-SPD_1835;Dbxref=NCBI_GP:ABJ55490.1;Name=ABJ55490.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1835;product=hypothetical protein;protein_id=ABJ55490.1;transl_table=11
CP000410.2	Genbank	gene	1822181	1822591	.	-	.	ID=gene-SPD_1836;Name=SPD_1836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1836
CP000410.2	Genbank	CDS	1822181	1822591	.	-	0	ID=cds-ABJ54898.1;Parent=gene-SPD_1836;Dbxref=NCBI_GP:ABJ54898.1;Name=ABJ54898.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2027%3B equivalent gene in S.pneumoniae R6 %3D spr1838%3B identified by match to protein family HMM PF02493;gbkey=CDS;locus_tag=SPD_1836;product=hypothetical protein;protein_id=ABJ54898.1;transl_table=11
CP000410.2	Genbank	gene	1822593	1823021	.	-	.	ID=gene-SPD_1837;Name=SPD_1837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1837
CP000410.2	Genbank	CDS	1822593	1823021	.	-	0	ID=cds-ABJ55438.1;Parent=gene-SPD_1837;Dbxref=NCBI_GP:ABJ55438.1;Name=ABJ55438.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2028%3B equivalent gene in S.pneumoniae R6 %3D spr1839%3B identified by match to protein family HMM PF01451;gbkey=CDS;locus_tag=SPD_1837;product=phosphotyrosine protein phosphatase;protein_id=ABJ55438.1;transl_table=11
CP000410.2	Genbank	gene	1823068	1823367	.	-	.	ID=gene-SPD_1838;Name=yajC-2;gbkey=Gene;gene=yajC-2;gene_biotype=protein_coding;locus_tag=SPD_1838
CP000410.2	Genbank	CDS	1823068	1823367	.	-	0	ID=cds-ABJ54629.1;Parent=gene-SPD_1838;Dbxref=NCBI_GP:ABJ54629.1;Name=ABJ54629.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2029%3B equivalent gene in S.pneumoniae R6 %3D spr1840%3B identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;gene=yajC-2;locus_tag=SPD_1838;product=preprotein translocase%2C YajC subunit;protein_id=ABJ54629.1;transl_table=11
CP000410.2	Genbank	gene	1823484	1825460	.	-	.	ID=gene-SPD_1839;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=SPD_1839
CP000410.2	Genbank	CDS	1823484	1825460	.	-	0	ID=cds-ABJ54025.1;Parent=gene-SPD_1839;Dbxref=NCBI_GP:ABJ54025.1;Name=ABJ54025.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2030%3B equivalent gene in S.pneumoniae R6 %3D spr1841%3B identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232;gbkey=CDS;gene=tkt;locus_tag=SPD_1839;product=transketolase;protein_id=ABJ54025.1;transl_table=11
CP000410.2	Genbank	gene	1825574	1826665	.	-	.	ID=gene-SPD_1840;Name=SPD_1840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1840
CP000410.2	Genbank	CDS	1825574	1826665	.	-	0	ID=cds-ABJ54328.1;Parent=gene-SPD_1840;Dbxref=NCBI_GP:ABJ54328.1;Name=ABJ54328.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2031%3B equivalent gene in S.pneumoniae R6 %3D spr1842;gbkey=CDS;locus_tag=SPD_1840;product=hypothetical protein;protein_id=ABJ54328.1;transl_table=11
CP000410.2	Genbank	gene	1826777	1828450	.	-	.	ID=gene-SPD_1841;Name=SPD_1841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1841
CP000410.2	Genbank	CDS	1826777	1828450	.	-	0	ID=cds-ABJ53913.1;Parent=gene-SPD_1841;Dbxref=NCBI_GP:ABJ53913.1;Name=ABJ53913.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2032%3B equivalent gene in S.pneumoniae R6 %3D spr1843%3B identified by match to protein family HMM PF00874;gbkey=CDS;locus_tag=SPD_1841;product=transcriptional regulator%2C BglG family protein;protein_id=ABJ53913.1;transl_table=11
CP000410.2	Genbank	gene	1828629	1829333	.	-	.	ID=gene-SPD_1842;Name=araD;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SPD_1842
CP000410.2	Genbank	CDS	1828629	1829333	.	-	0	ID=cds-ABJ53921.1;Parent=gene-SPD_1842;Dbxref=NCBI_GP:ABJ53921.1;Name=ABJ53921.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2033%3B equivalent gene in S.pneumoniae R6 %3D spr1844%3B identified by match to protein family HMM PF00596;gbkey=CDS;gene=araD;locus_tag=SPD_1842;product=L-ribulose-5-phosphate 4-epimerase;protein_id=ABJ53921.1;transl_table=11
CP000410.2	Genbank	gene	1829335	1830198	.	-	.	ID=gene-SPD_1843;Name=SPD_1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1843
CP000410.2	Genbank	CDS	1829335	1830198	.	-	0	ID=cds-ABJ53773.1;Parent=gene-SPD_1843;Dbxref=NCBI_GP:ABJ53773.1;Name=ABJ53773.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2034%3B equivalent gene in S.pneumoniae R6 %3D spr1845%3B identified by match to protein family HMM PF01261%3B match to protein family HMM TIGR00542;gbkey=CDS;locus_tag=SPD_1843;product=hexulose-6-phosphate isomerase%2C putative;protein_id=ABJ53773.1;transl_table=11
CP000410.2	Genbank	gene	1830202	1830867	.	-	.	ID=gene-SPD_1844;Name=SPD_1844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1844
CP000410.2	Genbank	CDS	1830202	1830867	.	-	0	ID=cds-ABJ54593.1;Parent=gene-SPD_1844;Dbxref=NCBI_GP:ABJ54593.1;Name=ABJ54593.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2035%3B equivalent gene in S.pneumoniae R6 %3D spr1846%3B identified by match to protein family HMM PF00215;gbkey=CDS;locus_tag=SPD_1844;product=hexulose-6-phosphate synthase%2C putative;protein_id=ABJ54593.1;transl_table=11
CP000410.2	Genbank	gene	1830884	1831369	.	-	.	ID=gene-SPD_1845;Name=SPD_1845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1845
CP000410.2	Genbank	CDS	1830884	1831369	.	-	0	ID=cds-ABJ54087.1;Parent=gene-SPD_1845;Dbxref=NCBI_GP:ABJ54087.1;Name=ABJ54087.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2036%3B equivalent gene in S.pneumoniae R6 %3D spr1847%3B identified by match to protein family HMM PF00359;gbkey=CDS;locus_tag=SPD_1845;product=PTS system%2C IIA component;protein_id=ABJ54087.1;transl_table=11
CP000410.2	Genbank	gene	1831446	1831727	.	-	.	ID=gene-SPD_1846;Name=SPD_1846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1846
CP000410.2	Genbank	CDS	1831446	1831727	.	-	0	ID=cds-ABJ54902.1;Parent=gene-SPD_1846;Dbxref=NCBI_GP:ABJ54902.1;Name=ABJ54902.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2037%3B equivalent gene in S.pneumoniae R6 %3D spr1848%3B identified by match to protein family HMM PF02302;gbkey=CDS;locus_tag=SPD_1846;product=PTS system%2C IIB component;protein_id=ABJ54902.1;transl_table=11
CP000410.2	Genbank	gene	1831750	1833207	.	-	.	ID=gene-SPD_1847;Name=SPD_1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1847
CP000410.2	Genbank	CDS	1831750	1833207	.	-	0	ID=cds-ABJ54997.1;Parent=gene-SPD_1847;Dbxref=NCBI_GP:ABJ54997.1;Name=ABJ54997.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2038%3B equivalent gene in S.pneumoniae R6 %3D spr1849%3B identified by match to protein family HMM PF04215;gbkey=CDS;locus_tag=SPD_1847;product=PTS system%2C membrane component%2C putative;protein_id=ABJ54997.1;transl_table=11
CP000410.2	Genbank	gene	1833338	1833961	.	-	.	ID=gene-SPD_1848;Name=SPD_1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1848
CP000410.2	Genbank	CDS	1833338	1833961	.	-	0	ID=cds-ABJ54139.1;Parent=gene-SPD_1848;Dbxref=NCBI_GP:ABJ54139.1;Name=ABJ54139.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2039%3B equivalent gene in S.pneumoniae R6 %3D spr1850;gbkey=CDS;locus_tag=SPD_1848;product=hypothetical protein;protein_id=ABJ54139.1;transl_table=11
CP000410.2	Genbank	gene	1834012	1834998	.	-	.	ID=gene-SPD_1849;Name=SPD_1849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1849
CP000410.2	Genbank	CDS	1834012	1834998	.	-	0	ID=cds-ABJ55280.1;Parent=gene-SPD_1849;Dbxref=NCBI_GP:ABJ55280.1;Name=ABJ55280.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2040%3B equivalent gene in S.pneumoniae R6 %3D spr1851%3B identified by match to protein family HMM PF01424;gbkey=CDS;locus_tag=SPD_1849;product=protein jag (SpoIIIJ-associated protein)%2C putative;protein_id=ABJ55280.1;transl_table=11
CP000410.2	Genbank	gene	1835017	1835847	.	-	.	ID=gene-SPD_1850;Name=SPD_1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1850
CP000410.2	Genbank	CDS	1835017	1835847	.	-	0	ID=cds-ABJ54425.1;Parent=gene-SPD_1850;Dbxref=NCBI_GP:ABJ54425.1;Name=ABJ54425.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2041%3B equivalent gene in S.pneumoniae R6 %3D spr1852%3B identified by match to protein family HMM PF02096;gbkey=CDS;locus_tag=SPD_1850;product=SpoIIIJ family protein;protein_id=ABJ54425.1;transl_table=11
CP000410.2	Genbank	gene	1835816	1836187	.	-	.	ID=gene-SPD_1851;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SPD_1851
CP000410.2	Genbank	CDS	1835816	1836187	.	-	0	ID=cds-ABJ54189.1;Parent=gene-SPD_1851;Dbxref=NCBI_GP:ABJ54189.1;Name=ABJ54189.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2042%3B equivalent gene in S.pneumoniae R6 %3D spr1853%3B identified by match to protein family HMM PF00825%3B match to protein family HMM TIGR00188;gbkey=CDS;gene=rnpA;locus_tag=SPD_1851;product=ribonuclease P protein component;protein_id=ABJ54189.1;transl_table=11
CP000410.2	Genbank	gene	1836204	1836335	.	-	.	ID=gene-SPD_1852;Name=SPD_1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1852
CP000410.2	Genbank	CDS	1836204	1836335	.	-	0	ID=cds-ABJ55264.1;Parent=gene-SPD_1852;Dbxref=NCBI_GP:ABJ55264.1;Name=ABJ55264.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2043;gbkey=CDS;locus_tag=SPD_1852;product=hypothetical protein;protein_id=ABJ55264.1;transl_table=11
CP000410.2	Genbank	gene	1836336	1837526	.	-	.	ID=gene-SPD_1853;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=SPD_1853
CP000410.2	Genbank	CDS	1836336	1837526	.	-	0	ID=cds-ABJ54153.1;Parent=gene-SPD_1853;Dbxref=NCBI_GP:ABJ54153.1;Name=ABJ54153.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2044%3B equivalent gene in S.pneumoniae R6 %3D spr1854%3B identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA;locus_tag=SPD_1853;product=acetate kinase;protein_id=ABJ54153.1;transl_table=11
CP000410.2	Genbank	gene	1837577	1838530	.	-	.	ID=gene-SPD_1854;Name=SPD_1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1854
CP000410.2	Genbank	CDS	1837577	1838530	.	-	0	ID=cds-ABJ55003.1;Parent=gene-SPD_1854;Dbxref=NCBI_GP:ABJ55003.1;Name=ABJ55003.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2045%3B equivalent gene in S.pneumoniae R6 %3D spr1855;gbkey=CDS;locus_tag=SPD_1854;product=hypothetical protein;protein_id=ABJ55003.1;transl_table=11
CP000410.2	Genbank	gene	1838591	1838971	.	-	.	ID=gene-SPD_1855;Name=SPD_1855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1855
CP000410.2	Genbank	CDS	1838591	1838971	.	-	0	ID=cds-ABJ53944.1;Parent=gene-SPD_1855;Dbxref=NCBI_GP:ABJ53944.1;Name=ABJ53944.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1856;gbkey=CDS;locus_tag=SPD_1855;product=hypothetical protein;protein_id=ABJ53944.1;transl_table=11
CP000410.2	Genbank	gene	1839003	1839185	.	-	.	ID=gene-SPD_1856;Name=SPD_1856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1856
CP000410.2	Genbank	CDS	1839003	1839185	.	-	0	ID=cds-ABJ54791.1;Parent=gene-SPD_1856;Dbxref=NCBI_GP:ABJ54791.1;Name=ABJ54791.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1857;gbkey=CDS;locus_tag=SPD_1856;product=hypothetical protein;protein_id=ABJ54791.1;transl_table=11
CP000410.2	Genbank	gene	1839322	1839735	.	-	.	ID=gene-SPD_1857;Name=SPD_1857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1857
CP000410.2	Genbank	CDS	1839322	1839735	.	-	0	ID=cds-ABJ53717.1;Parent=gene-SPD_1857;Dbxref=NCBI_GP:ABJ53717.1;Name=ABJ53717.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2047%3B equivalent gene in S.pneumoniae R6 %3D spr1858;gbkey=CDS;locus_tag=SPD_1857;product=hypothetical protein;protein_id=ABJ53717.1;transl_table=11
CP000410.2	Genbank	gene	1839713	1840174	.	-	.	ID=gene-SPD_1858;Name=SPD_1858;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1858
CP000410.2	Genbank	CDS	1839713	1840174	.	-	0	ID=cds-ABJ54449.1;Parent=gene-SPD_1858;Dbxref=NCBI_GP:ABJ54449.1;Name=ABJ54449.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2048%3B equivalent gene in S.pneumoniae R6 %3D spr1859;gbkey=CDS;locus_tag=SPD_1858;product=hypothetical protein;protein_id=ABJ54449.1;transl_table=11
CP000410.2	Genbank	gene	1840137	1840397	.	-	.	ID=gene-SPD_1859;Name=SPD_1859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1859
CP000410.2	Genbank	CDS	1840137	1840397	.	-	0	ID=cds-ABJ54466.1;Parent=gene-SPD_1859;Dbxref=NCBI_GP:ABJ54466.1;Name=ABJ54466.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2049;gbkey=CDS;locus_tag=SPD_1859;product=hypothetical protein;protein_id=ABJ54466.1;transl_table=11
CP000410.2	Genbank	gene	1840402	1840806	.	-	.	ID=gene-SPD_1860;Name=clgD;gbkey=Gene;gene=clgD;gene_biotype=protein_coding;locus_tag=SPD_1860
CP000410.2	Genbank	CDS	1840402	1840806	.	-	0	ID=cds-ABJ55112.1;Parent=gene-SPD_1860;Dbxref=NCBI_GP:ABJ55112.1;Name=ABJ55112.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2050%3B equivalent gene in S.pneumoniae R6 %3D spr1861%3B identified by match to protein family HMM TIGR02532;gbkey=CDS;gene=clgD;locus_tag=SPD_1860;product=competence protein CglD;protein_id=ABJ55112.1;transl_table=11
CP000410.2	Genbank	gene	1840799	1841125	.	-	.	ID=gene-SPD_1861;Name=cglC;gbkey=Gene;gene=cglC;gene_biotype=protein_coding;locus_tag=SPD_1861
CP000410.2	Genbank	CDS	1840799	1841125	.	-	0	ID=cds-ABJ54206.1;Parent=gene-SPD_1861;Dbxref=NCBI_GP:ABJ54206.1;Name=ABJ54206.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2051%3B equivalent gene in S.pneumoniae R6 %3D spr1862%3B identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;gene=cglC;locus_tag=SPD_1861;product=competence protein CglC;protein_id=ABJ54206.1;transl_table=11
CP000410.2	Genbank	gene	1841127	1841999	.	-	.	ID=gene-SPD_1862;Name=cglB;gbkey=Gene;gene=cglB;gene_biotype=protein_coding;locus_tag=SPD_1862
CP000410.2	Genbank	CDS	1841127	1841999	.	-	0	ID=cds-ABJ54288.1;Parent=gene-SPD_1862;Dbxref=NCBI_GP:ABJ54288.1;Name=ABJ54288.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2052%3B equivalent gene in S.pneumoniae R6 %3D spr1863%3B identified by match to protein family HMM PF00482;gbkey=CDS;gene=cglB;locus_tag=SPD_1862;product=competence protein CglB;protein_id=ABJ54288.1;transl_table=11
CP000410.2	Genbank	gene	1842091	1843032	.	-	.	ID=gene-SPD_1863;Name=cglA;gbkey=Gene;gene=cglA;gene_biotype=protein_coding;locus_tag=SPD_1863
CP000410.2	Genbank	CDS	1842091	1843032	.	-	0	ID=cds-ABJ55079.1;Parent=gene-SPD_1863;Dbxref=NCBI_GP:ABJ55079.1;Name=ABJ55079.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2053%3B equivalent gene in S.pneumoniae R6 %3D spr1864%3B identified by match to protein family HMM PF00437;gbkey=CDS;gene=cglA;locus_tag=SPD_1863;product=competence protein CglA;protein_id=ABJ55079.1;transl_table=11
CP000410.2	Genbank	gene	1843108	1843473	.	-	.	ID=gene-SPD_1864;Name=SPD_1864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1864
CP000410.2	Genbank	CDS	1843108	1843473	.	-	0	ID=cds-ABJ54205.1;Parent=gene-SPD_1864;Dbxref=NCBI_GP:ABJ54205.1;Name=ABJ54205.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2054%3B equivalent gene in S.pneumoniae R6 %3D spr1865%3B identified by match to protein family HMM PF06279;gbkey=CDS;locus_tag=SPD_1864;product=hypothetical protein;protein_id=ABJ54205.1;transl_table=11
CP000410.2	Genbank	gene	1843624	1844682	.	-	.	ID=gene-SPD_1865;Name=SPD_1865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1865
CP000410.2	Genbank	CDS	1843624	1844682	.	-	0	ID=cds-ABJ55393.1;Parent=gene-SPD_1865;Dbxref=NCBI_GP:ABJ55393.1;Name=ABJ55393.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2055%3B equivalent gene in S.pneumoniae R6 %3D spr1866%3B identified by match to protein family HMM PF00107;gbkey=CDS;locus_tag=SPD_1865;product=alcohol dehydrogenase%2C zinc-containing;protein_id=ABJ55393.1;transl_table=11
CP000410.2	Genbank	gene	1844845	1845996	.	-	.	ID=gene-SPD_1866;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SPD_1866
CP000410.2	Genbank	CDS	1844845	1845996	.	-	0	ID=cds-ABJ54529.1;Parent=gene-SPD_1866;Dbxref=NCBI_GP:ABJ54529.1;Name=ABJ54529.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2056%3B equivalent gene in S.pneumoniae R6 %3D spr1867%3B identified by match to protein family HMM PF01979%3B match to protein family HMM TIGR00221;gbkey=CDS;gene=nagA;locus_tag=SPD_1866;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=ABJ54529.1;transl_table=11
CP000410.2	Genbank	gene	1846149	1847966	.	-	.	ID=gene-SPD_1867;Name=SPD_1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1867
CP000410.2	Genbank	CDS	1846149	1847966	.	-	0	ID=cds-ABJ54649.1;Parent=gene-SPD_1867;Dbxref=NCBI_GP:ABJ54649.1;Name=ABJ54649.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2057%3B equivalent gene in S.pneumoniae R6 %3D spr1868%3B identified by match to protein family HMM PF01757;gbkey=CDS;locus_tag=SPD_1867;product=membrane protein%2C putative;protein_id=ABJ54649.1;transl_table=11
CP000410.2	Genbank	gene	1848064	1849206	.	-	.	ID=gene-SPD_1868;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=SPD_1868
CP000410.2	Genbank	CDS	1848064	1849206	.	-	0	ID=cds-ABJ53811.1;Parent=gene-SPD_1868;Dbxref=NCBI_GP:ABJ53811.1;Name=ABJ53811.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2058%3B equivalent gene in S.pneumoniae R6 %3D spr1869%3B identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449;gbkey=CDS;gene=tgt;locus_tag=SPD_1868;product=queuine tRNA-ribosyltransferase;protein_id=ABJ53811.1;transl_table=11
CP000410.2	Genbank	gene	1849336	1850193	.	+	.	ID=gene-SPD_1869;Name=SPD_1869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1869
CP000410.2	Genbank	CDS	1849336	1850193	.	+	0	ID=cds-ABJ54190.1;Parent=gene-SPD_1869;Dbxref=NCBI_GP:ABJ54190.1;Name=ABJ54190.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2059%3B equivalent gene in S.pneumoniae R6 %3D spr1870%3B identified by match to protein family HMM PF06161;gbkey=CDS;locus_tag=SPD_1869;product=membrane protein%2C putative;protein_id=ABJ54190.1;transl_table=11
CP000410.2	Genbank	pseudogene	1850221	1850838	.	-	.	ID=gene-SPD_1870;Name=SPD_1870;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2060%3B equivalent gene in S.pneumoniae R6 %3D spr1872%3B pyrrolidone-carboxylate peptidase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1870;pseudo=true
CP000410.2	Genbank	gene	1851004	1851303	.	-	.	ID=gene-SPD_1871;Name=SPD_1871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1871
CP000410.2	Genbank	CDS	1851004	1851303	.	-	0	ID=cds-ABJ55299.1;Parent=gene-SPD_1871;Dbxref=NCBI_GP:ABJ55299.1;Name=ABJ55299.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2061%3B equivalent gene in S.pneumoniae R6 %3D spr1873%3B identified by match to protein family HMM PF06993;gbkey=CDS;locus_tag=SPD_1871;product=hypothetical protein;protein_id=ABJ55299.1;transl_table=11
CP000410.2	Genbank	pseudogene	1851314	1851738	.	-	.	ID=gene-SPD_1872;Name=SPD_1872;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2062%3B equivalent gene in S.pneumoniae R6 %3D spr1874. The gene is identically degenerate in R6%3B transcriptional regulator%2C MarR family protein%2C degenerate%3B identified by match to protein family HMM PF01022%3B match to protein family HMM PF01047;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1872;pseudo=true
CP000410.2	Genbank	gene	1851735	1851848	.	-	.	ID=gene-SPD_1873;Name=SPD_1873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1873
CP000410.2	Genbank	CDS	1851735	1851848	.	-	0	ID=cds-ABJ53640.1;Parent=gene-SPD_1873;Dbxref=NCBI_GP:ABJ53640.1;Name=ABJ53640.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1873;product=hypothetical protein;protein_id=ABJ53640.1;transl_table=11
CP000410.2	Genbank	gene	1852058	1853200	.	-	.	ID=gene-SPD_1874;Name=SPD_1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1874
CP000410.2	Genbank	CDS	1852058	1853200	.	-	0	ID=cds-ABJ54066.1;Parent=gene-SPD_1874;Dbxref=NCBI_GP:ABJ54066.1;Name=ABJ54066.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2063%3B equivalent gene in S.pneumoniae R6 %3D spr1875%3B identified by match to protein family HMM PF01476;gbkey=CDS;locus_tag=SPD_1874;product=LysM domain protein;protein_id=ABJ54066.1;transl_table=11
CP000410.2	Genbank	gene	1853366	1853986	.	-	.	ID=gene-SPD_1875;Name=SPD_1875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1875
CP000410.2	Genbank	CDS	1853366	1853986	.	-	0	ID=cds-ABJ54930.1;Parent=gene-SPD_1875;Dbxref=NCBI_GP:ABJ54930.1;Name=ABJ54930.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2064%3B equivalent gene in S.pneumoniae R6 %3D spr1876%3B identified by match to protein family HMM PF00702%3B match to protein family HMM TIGR01549;gbkey=CDS;locus_tag=SPD_1875;product=hydrolase%2C haloacid dehalogenase-like family protein;protein_id=ABJ54930.1;transl_table=11
CP000410.2	Genbank	gene	1853990	1855270	.	-	.	ID=gene-SPD_1876;Name=SPD_1876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1876
CP000410.2	Genbank	CDS	1853990	1855270	.	-	0	ID=cds-ABJ54213.1;Parent=gene-SPD_1876;Dbxref=NCBI_GP:ABJ54213.1;Name=ABJ54213.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2065%3B equivalent gene in S.pneumoniae R6 %3D spr1877%3B identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=SPD_1876;product=MATE efflux family protein;protein_id=ABJ54213.1;transl_table=11
CP000410.2	Genbank	gene	1855331	1856815	.	-	.	ID=gene-SPD_1877;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=SPD_1877
CP000410.2	Genbank	CDS	1855331	1856815	.	-	0	ID=cds-ABJ55059.1;Parent=gene-SPD_1877;Dbxref=NCBI_GP:ABJ55059.1;Name=ABJ55059.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2066%3B equivalent gene in S.pneumoniae R6 %3D spr1878%3B identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260;gbkey=CDS;gene=thrC;locus_tag=SPD_1877;product=threonine synthase;protein_id=ABJ55059.1;transl_table=11
CP000410.2	Genbank	gene	1856891	1858168	.	-	.	ID=gene-SPD_1878;Name=SPD_1878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1878
CP000410.2	Genbank	CDS	1856891	1858168	.	-	0	ID=cds-ABJ53748.1;Parent=gene-SPD_1878;Dbxref=NCBI_GP:ABJ53748.1;Name=ABJ53748.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2067%3B equivalent gene in S.pneumoniae R6 %3D spr1879;gbkey=CDS;locus_tag=SPD_1878;product=hypothetical protein;protein_id=ABJ53748.1;transl_table=11
CP000410.2	Genbank	gene	1858275	1858358	.	-	.	ID=gene-SPD_1879;Name=SPD_1879;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1879
CP000410.2	Genbank	tRNA	1858275	1858358	.	-	.	ID=rna-SPD_1879;Parent=gene-SPD_1879;gbkey=tRNA;locus_tag=SPD_1879;product=tRNA-Leu
CP000410.2	Genbank	exon	1858275	1858358	.	-	.	ID=exon-SPD_1879-1;Parent=rna-SPD_1879;gbkey=tRNA;locus_tag=SPD_1879;product=tRNA-Leu
CP000410.2	Genbank	gene	1858368	1858439	.	-	.	ID=gene-SPD_1880;Name=SPD_1880;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1880
CP000410.2	Genbank	tRNA	1858368	1858439	.	-	.	ID=rna-SPD_1880;Parent=gene-SPD_1880;gbkey=tRNA;locus_tag=SPD_1880;product=tRNA-Gln
CP000410.2	Genbank	exon	1858368	1858439	.	-	.	ID=exon-SPD_1880-1;Parent=rna-SPD_1880;gbkey=tRNA;locus_tag=SPD_1880;product=tRNA-Gln
CP000410.2	Genbank	gene	1858450	1858522	.	-	.	ID=gene-SPD_1881;Name=SPD_1881;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1881
CP000410.2	Genbank	tRNA	1858450	1858522	.	-	.	ID=rna-SPD_1881;Parent=gene-SPD_1881;gbkey=tRNA;locus_tag=SPD_1881;product=tRNA-His
CP000410.2	Genbank	exon	1858450	1858522	.	-	.	ID=exon-SPD_1881-1;Parent=rna-SPD_1881;gbkey=tRNA;locus_tag=SPD_1881;product=tRNA-His
CP000410.2	Genbank	gene	1858537	1858607	.	-	.	ID=gene-SPD_1882;Name=SPD_1882;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1882
CP000410.2	Genbank	tRNA	1858537	1858607	.	-	.	ID=rna-SPD_1882;Parent=gene-SPD_1882;gbkey=tRNA;locus_tag=SPD_1882;product=tRNA-Trp
CP000410.2	Genbank	exon	1858537	1858607	.	-	.	ID=exon-SPD_1882-1;Parent=rna-SPD_1882;gbkey=tRNA;locus_tag=SPD_1882;product=tRNA-Trp
CP000410.2	Genbank	gene	1858612	1858692	.	-	.	ID=gene-SPD_1883;Name=SPD_1883;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1883
CP000410.2	Genbank	tRNA	1858612	1858692	.	-	.	ID=rna-SPD_1883;Parent=gene-SPD_1883;gbkey=tRNA;locus_tag=SPD_1883;product=tRNA-Tyr
CP000410.2	Genbank	exon	1858612	1858692	.	-	.	ID=exon-SPD_1883-1;Parent=rna-SPD_1883;gbkey=tRNA;locus_tag=SPD_1883;product=tRNA-Tyr
CP000410.2	Genbank	gene	1858705	1858777	.	-	.	ID=gene-SPD_1884;Name=SPD_1884;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1884
CP000410.2	Genbank	tRNA	1858705	1858777	.	-	.	ID=rna-SPD_1884;Parent=gene-SPD_1884;gbkey=tRNA;locus_tag=SPD_1884;product=tRNA-Phe
CP000410.2	Genbank	exon	1858705	1858777	.	-	.	ID=exon-SPD_1884-1;Parent=rna-SPD_1884;gbkey=tRNA;locus_tag=SPD_1884;product=tRNA-Phe
CP000410.2	Genbank	gene	1858781	1858854	.	-	.	ID=gene-SPD_1885;Name=SPD_1885;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1885
CP000410.2	Genbank	tRNA	1858781	1858854	.	-	.	ID=rna-SPD_1885;Parent=gene-SPD_1885;gbkey=tRNA;locus_tag=SPD_1885;product=tRNA-Met
CP000410.2	Genbank	exon	1858781	1858854	.	-	.	ID=exon-SPD_1885-1;Parent=rna-SPD_1885;gbkey=tRNA;locus_tag=SPD_1885;product=tRNA-Met
CP000410.2	Genbank	gene	1858865	1858954	.	-	.	ID=gene-SPD_1886;Name=SPD_1886;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1886
CP000410.2	Genbank	tRNA	1858865	1858954	.	-	.	ID=rna-SPD_1886;Parent=gene-SPD_1886;gbkey=tRNA;locus_tag=SPD_1886;product=tRNA-Ser
CP000410.2	Genbank	exon	1858865	1858954	.	-	.	ID=exon-SPD_1886-1;Parent=rna-SPD_1886;gbkey=tRNA;locus_tag=SPD_1886;product=tRNA-Ser
CP000410.2	Genbank	gene	1859038	1859111	.	-	.	ID=gene-SPD_1887;Name=SPD_1887;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1887
CP000410.2	Genbank	tRNA	1859038	1859111	.	-	.	ID=rna-SPD_1887;Parent=gene-SPD_1887;gbkey=tRNA;locus_tag=SPD_1887;product=tRNA-Ile
CP000410.2	Genbank	exon	1859038	1859111	.	-	.	ID=exon-SPD_1887-1;Parent=rna-SPD_1887;gbkey=tRNA;locus_tag=SPD_1887;product=tRNA-Ile
CP000410.2	Genbank	gene	1859146	1859216	.	-	.	ID=gene-SPD_1888;Name=SPD_1888;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1888
CP000410.2	Genbank	tRNA	1859146	1859216	.	-	.	ID=rna-SPD_1888;Parent=gene-SPD_1888;gbkey=tRNA;locus_tag=SPD_1888;product=tRNA-Gly
CP000410.2	Genbank	exon	1859146	1859216	.	-	.	ID=exon-SPD_1888-1;Parent=rna-SPD_1888;gbkey=tRNA;locus_tag=SPD_1888;product=tRNA-Gly
CP000410.2	Genbank	gene	1859222	1859294	.	-	.	ID=gene-SPD_1889;Name=SPD_1889;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1889
CP000410.2	Genbank	tRNA	1859222	1859294	.	-	.	ID=rna-SPD_1889;Parent=gene-SPD_1889;gbkey=tRNA;locus_tag=SPD_1889;product=tRNA-Val
CP000410.2	Genbank	exon	1859222	1859294	.	-	.	ID=exon-SPD_1889-1;Parent=rna-SPD_1889;gbkey=tRNA;locus_tag=SPD_1889;product=tRNA-Val
CP000410.2	Genbank	gene	1859299	1859414	.	-	.	ID=gene-SPD_1890;Name=rrfD;gbkey=Gene;gene=rrfD;gene_biotype=rRNA;locus_tag=SPD_1890
CP000410.2	Genbank	rRNA	1859299	1859414	.	-	.	ID=rna-SPD_1890;Parent=gene-SPD_1890;gbkey=rRNA;gene=rrfD;locus_tag=SPD_1890;product=5S ribosomal RNA
CP000410.2	Genbank	exon	1859299	1859414	.	-	.	ID=exon-SPD_1890-1;Parent=rna-SPD_1890;gbkey=rRNA;gene=rrfD;locus_tag=SPD_1890;product=5S ribosomal RNA
CP000410.2	Genbank	gene	1859491	1862392	.	-	.	ID=gene-SPD_1891;Name=rrlD;gbkey=Gene;gene=rrlD;gene_biotype=rRNA;locus_tag=SPD_1891
CP000410.2	Genbank	rRNA	1859491	1862392	.	-	.	ID=rna-SPD_1891;Parent=gene-SPD_1891;gbkey=rRNA;gene=rrlD;locus_tag=SPD_1891;product=23S ribosomal RNA
CP000410.2	Genbank	exon	1859491	1862392	.	-	.	ID=exon-SPD_1891-1;Parent=rna-SPD_1891;gbkey=rRNA;gene=rrlD;locus_tag=SPD_1891;product=23S ribosomal RNA
CP000410.2	Genbank	gene	1862517	1862589	.	-	.	ID=gene-SPD_1892;Name=SPD_1892;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1892
CP000410.2	Genbank	tRNA	1862517	1862589	.	-	.	ID=rna-SPD_1892;Parent=gene-SPD_1892;gbkey=tRNA;locus_tag=SPD_1892;product=tRNA-Ala
CP000410.2	Genbank	exon	1862517	1862589	.	-	.	ID=exon-SPD_1892-1;Parent=rna-SPD_1892;gbkey=tRNA;locus_tag=SPD_1892;product=tRNA-Ala
CP000410.2	Genbank	gene	1862716	1864173	.	-	.	ID=gene-SPD_1893;Name=rrsD;gbkey=Gene;gene=rrsD;gene_biotype=rRNA;locus_tag=SPD_1893
CP000410.2	Genbank	rRNA	1862716	1864173	.	-	.	ID=rna-SPD_1893;Parent=gene-SPD_1893;gbkey=rRNA;gene=rrsD;locus_tag=SPD_1893;product=16S ribosomal RNA
CP000410.2	Genbank	exon	1862716	1864173	.	-	.	ID=exon-SPD_1893-1;Parent=rna-SPD_1893;gbkey=rRNA;gene=rrsD;locus_tag=SPD_1893;product=16S ribosomal RNA
CP000410.2	Genbank	gene	1864439	1864510	.	-	.	ID=gene-SPD_1894;Name=SPD_1894;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_1894
CP000410.2	Genbank	tRNA	1864439	1864510	.	-	.	ID=rna-SPD_1894;Parent=gene-SPD_1894;gbkey=tRNA;locus_tag=SPD_1894;product=tRNA-Glu
CP000410.2	Genbank	exon	1864439	1864510	.	-	.	ID=exon-SPD_1894-1;Parent=rna-SPD_1894;gbkey=tRNA;locus_tag=SPD_1894;product=tRNA-Glu
CP000410.2	Genbank	gene	1864632	1865066	.	-	.	ID=gene-SPD_1895;Name=SPD_1895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1895
CP000410.2	Genbank	CDS	1864632	1865066	.	-	0	ID=cds-ABJ53637.1;Parent=gene-SPD_1895;Dbxref=NCBI_GP:ABJ53637.1;Name=ABJ53637.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2068%3B equivalent gene in S.pneumoniae R6 %3D spr1880%3B identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=SPD_1895;product=cytidine/deoxycytidylate deaminase family protein;protein_id=ABJ53637.1;transl_table=11
CP000410.2	Genbank	gene	1865080	1866540	.	-	.	ID=gene-SPD_1896;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SPD_1896
CP000410.2	Genbank	CDS	1865080	1866540	.	-	0	ID=cds-ABJ55242.1;Parent=gene-SPD_1896;Dbxref=NCBI_GP:ABJ55242.1;Name=ABJ55242.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2069%3B equivalent gene in S.pneumoniae R6 %3D spr1881%3B identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464;gbkey=CDS;gene=gltX;locus_tag=SPD_1896;product=glutamyl-tRNA synthetase;protein_id=ABJ55242.1;transl_table=11
CP000410.2	Genbank	gene	1866664	1868013	.	-	.	ID=gene-SPD_1897;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SPD_1897
CP000410.2	Genbank	CDS	1866664	1868013	.	-	0	ID=cds-ABJ54906.1;Parent=gene-SPD_1897;Dbxref=NCBI_GP:ABJ54906.1;Name=ABJ54906.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2070%3B equivalent gene in S.pneumoniae R6 %3D spr1882%3B identified by match to protein family HMM PF00342;gbkey=CDS;gene=pgi;locus_tag=SPD_1897;product=glucose-6-phosphate isomerase;protein_id=ABJ54906.1;transl_table=11
CP000410.2	Genbank	gene	1868000	1868179	.	-	.	ID=gene-SPD_1898;Name=SPD_1898;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1898
CP000410.2	Genbank	CDS	1868000	1868179	.	-	0	ID=cds-ABJ55068.1;Parent=gene-SPD_1898;Dbxref=NCBI_GP:ABJ55068.1;Name=ABJ55068.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2071%3B equivalent gene in S.pneumoniae R6 %3D spr1883;gbkey=CDS;locus_tag=SPD_1898;product=hypothetical protein;protein_id=ABJ55068.1;transl_table=11
CP000410.2	Genbank	gene	1868183	1868911	.	-	.	ID=gene-SPD_1899;Name=SPD_1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1899
CP000410.2	Genbank	CDS	1868183	1868911	.	-	0	ID=cds-ABJ54663.1;Parent=gene-SPD_1899;Dbxref=NCBI_GP:ABJ54663.1;Name=ABJ54663.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2072%3B equivalent gene in S.pneumoniae R6 %3D spr1884%3B identified by match to protein family HMM PF00117%3B match to protein family HMM PF07722;gbkey=CDS;locus_tag=SPD_1899;product=glutamine amidotransferase%2C class 1;protein_id=ABJ54663.1;transl_table=11
CP000410.2	Genbank	gene	1869011	1870777	.	-	.	ID=gene-SPD_1900;Name=SPD_1900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1900
CP000410.2	Genbank	CDS	1869011	1870777	.	-	0	ID=cds-ABJ53826.1;Parent=gene-SPD_1900;Dbxref=NCBI_GP:ABJ53826.1;Name=ABJ53826.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2073%3B equivalent gene in S.pneumoniae R6 %3D spr1885%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1900;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ53826.1;transl_table=11
CP000410.2	Genbank	gene	1871025	1871234	.	+	.	ID=gene-SPD_1901;Name=SPD_1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1901
CP000410.2	Genbank	CDS	1871025	1871234	.	+	0	ID=cds-ABJ54414.1;Parent=gene-SPD_1901;Dbxref=NCBI_GP:ABJ54414.1;Name=ABJ54414.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1886;gbkey=CDS;locus_tag=SPD_1901;product=transposase%2C putative;protein_id=ABJ54414.1;transl_table=11
CP000410.2	Genbank	gene	1871564	1873258	.	-	.	ID=gene-SPD_1902;Name=SPD_1902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1902
CP000410.2	Genbank	CDS	1871564	1873258	.	-	0	ID=cds-ABJ55477.1;Parent=gene-SPD_1902;Dbxref=NCBI_GP:ABJ55477.1;Name=ABJ55477.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2075%3B equivalent gene in S.pneumoniae R6 %3D spr1887%3B identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=SPD_1902;product=ABC transporter%2C ATP-binding/permease protein;protein_id=ABJ55477.1;transl_table=11
CP000410.2	Genbank	gene	1873405	1875939	.	-	.	ID=gene-SPD_1903;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=SPD_1903
CP000410.2	Genbank	CDS	1873405	1875939	.	-	0	ID=cds-ABJ54127.1;Parent=gene-SPD_1903;Dbxref=NCBI_GP:ABJ54127.1;Name=ABJ54127.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1888%3B identified by match to protein family HMM PF00488%3B match to protein family HMM PF01624%3B match to protein family HMM PF05188%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070;gbkey=CDS;gene=mutS;locus_tag=SPD_1903;product=DNA mismatch repair protein MutS;protein_id=ABJ54127.1;transl_table=11
CP000410.2	Genbank	gene	1875990	1876436	.	-	.	ID=gene-SPD_1904;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=SPD_1904
CP000410.2	Genbank	CDS	1875990	1876436	.	-	0	ID=cds-ABJ55255.1;Parent=gene-SPD_1904;Dbxref=NCBI_GP:ABJ55255.1;Name=ABJ55255.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2077%3B equivalent gene in S.pneumoniae R6 %3D spr1889%3B identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529;gbkey=CDS;gene=argR;locus_tag=SPD_1904;product=arginine repressor;protein_id=ABJ55255.1;transl_table=11
CP000410.2	Genbank	gene	1876584	1878275	.	+	.	ID=gene-SPD_1905;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=SPD_1905
CP000410.2	Genbank	CDS	1876584	1878275	.	+	0	ID=cds-ABJ54835.1;Parent=gene-SPD_1905;Dbxref=NCBI_GP:ABJ54835.1;Name=ABJ54835.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2078%3B equivalent gene in S.pneumoniae R6 %3D spr1890%3B identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456;gbkey=CDS;gene=argS;locus_tag=SPD_1905;product=arginyl-tRNA synthetase;protein_id=ABJ54835.1;transl_table=11
CP000410.2	Genbank	gene	1878590	1878979	.	-	.	ID=gene-SPD_1906;Name=SPD_1906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1906
CP000410.2	Genbank	CDS	1878590	1878979	.	-	0	ID=cds-ABJ54775.1;Parent=gene-SPD_1906;Dbxref=NCBI_GP:ABJ54775.1;Name=ABJ54775.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1086%3B equivalent gene in S.pneumoniae R6 %3D spr1891%3B identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=SPD_1906;product=IS1381%2C transposase OrfB;protein_id=ABJ54775.1;transl_table=11
CP000410.2	Genbank	gene	1879143	1879619	.	+	.	ID=gene-SPD_1907;Name=SPD_1907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1907
CP000410.2	Genbank	CDS	1879143	1879619	.	+	0	ID=cds-ABJ53687.1;Parent=gene-SPD_1907;Dbxref=NCBI_GP:ABJ53687.1;Name=ABJ53687.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2081%3B equivalent gene in S.pneumoniae R6 %3D spr1892%3B identified by match to protein family HMM PF06172;gbkey=CDS;locus_tag=SPD_1907;product=hypothetical protein;protein_id=ABJ53687.1;transl_table=11
CP000410.2	Genbank	gene	1879703	1880410	.	+	.	ID=gene-SPD_1908;Name=SPD_1908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1908
CP000410.2	Genbank	CDS	1879703	1880410	.	+	0	ID=cds-ABJ54407.1;Parent=gene-SPD_1908;Dbxref=NCBI_GP:ABJ54407.1;Name=ABJ54407.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2082%3B equivalent gene in S.pneumoniae R6 %3D spr1893%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=SPD_1908;product=response regulator;protein_id=ABJ54407.1;transl_table=11
CP000410.2	Genbank	gene	1880411	1881742	.	+	.	ID=gene-SPD_1909;Name=pnpS;gbkey=Gene;gene=pnpS;gene_biotype=protein_coding;locus_tag=SPD_1909
CP000410.2	Genbank	CDS	1880411	1881742	.	+	0	ID=cds-ABJ54246.1;Parent=gene-SPD_1909;Dbxref=NCBI_GP:ABJ54246.1;Name=ABJ54246.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2083%3B equivalent gene in S.pneumoniae R6 %3D spr1894%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;gene=pnpS;locus_tag=SPD_1909;product=sensor histidine kinase PnpS;protein_id=ABJ54246.1;transl_table=11
CP000410.2	Genbank	gene	1881909	1882784	.	+	.	ID=gene-SPD_1910;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=SPD_1910
CP000410.2	Genbank	CDS	1881909	1882784	.	+	0	ID=cds-ABJ55086.1;Parent=gene-SPD_1910;Dbxref=NCBI_GP:ABJ55086.1;Name=ABJ55086.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2084%3B equivalent gene in S.pneumoniae R6 %3D spr1895;gbkey=CDS;gene=pstS;locus_tag=SPD_1910;product=phosphate ABC transporter%2C phosphate-binding protein;protein_id=ABJ55086.1;transl_table=11
CP000410.2	Genbank	gene	1882902	1883765	.	+	.	ID=gene-SPD_1911;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=SPD_1911
CP000410.2	Genbank	CDS	1882902	1883765	.	+	0	ID=cds-ABJ54014.1;Parent=gene-SPD_1911;Dbxref=NCBI_GP:ABJ54014.1;Name=ABJ54014.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2085%3B equivalent gene in S.pneumoniae R6 %3D spr1896%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138;gbkey=CDS;gene=pstC;locus_tag=SPD_1911;product=phosphate ABC transporter%2C permease protein PstC;protein_id=ABJ54014.1;transl_table=11
CP000410.2	Genbank	gene	1883758	1884573	.	+	.	ID=gene-SPD_1912;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=SPD_1912
CP000410.2	Genbank	CDS	1883758	1884573	.	+	0	ID=cds-ABJ54864.1;Parent=gene-SPD_1912;Dbxref=NCBI_GP:ABJ54864.1;Name=ABJ54864.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2086%3B equivalent gene in S.pneumoniae R6 %3D spr1897%3B identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974;gbkey=CDS;gene=pstA;locus_tag=SPD_1912;product=phosphate ABC transporter%2C permease protein PstA;protein_id=ABJ54864.1;transl_table=11
CP000410.2	Genbank	gene	1884575	1885327	.	+	.	ID=gene-SPD_1913;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=SPD_1913
CP000410.2	Genbank	CDS	1884575	1885327	.	+	0	ID=cds-ABJ54870.1;Parent=gene-SPD_1913;Dbxref=NCBI_GP:ABJ54870.1;Name=ABJ54870.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2087%3B equivalent gene in S.pneumoniae R6 %3D spr1898%3B identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972;gbkey=CDS;gene=pstB;locus_tag=SPD_1913;product=phosphate ABC transporter%2C ATP-binding protein;protein_id=ABJ54870.1;transl_table=11
CP000410.2	Genbank	gene	1885342	1885992	.	+	.	ID=gene-SPD_1914;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=SPD_1914
CP000410.2	Genbank	CDS	1885342	1885992	.	+	0	ID=cds-ABJ53840.1;Parent=gene-SPD_1914;Dbxref=NCBI_GP:ABJ53840.1;Name=ABJ53840.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2088%3B equivalent gene in S.pneumoniae R6 %3D spr1899%3B identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135;gbkey=CDS;gene=phoU;locus_tag=SPD_1914;product=phosphate transport system regulatory protein PhoU;protein_id=ABJ53840.1;transl_table=11
CP000410.2	Genbank	pseudogene	1886060	1886476	.	+	.	ID=gene-SPD_1915;Name=SPD_1915;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2089%3B equivalent gene in S.pneumoniae R6 %3D spr1900%3B IS1380-Spn1%2C transposase%2C truncation;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1915;pseudo=true
CP000410.2	Genbank	gene	1886599	1887039	.	-	.	ID=gene-SPD_1916;Name=SPD_1916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1916
CP000410.2	Genbank	CDS	1886599	1887039	.	-	0	ID=cds-ABJ55346.1;Parent=gene-SPD_1916;Dbxref=NCBI_GP:ABJ55346.1;Name=ABJ55346.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2090%3B equivalent gene in S.pneumoniae R6 %3D spr1901%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_1916;product=transcriptional regulator;protein_id=ABJ55346.1;transl_table=11
CP000410.2	Genbank	gene	1887130	1887252	.	-	.	ID=gene-SPD_1917;Name=SPD_1917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1917
CP000410.2	Genbank	CDS	1887130	1887252	.	-	0	ID=cds-ABJ54584.1;Parent=gene-SPD_1917;Dbxref=NCBI_GP:ABJ54584.1;Name=ABJ54584.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1917;product=hypothetical protein;protein_id=ABJ54584.1;transl_table=11
CP000410.2	Genbank	gene	1887251	1888267	.	+	.	ID=gene-SPD_1918;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=SPD_1918
CP000410.2	Genbank	CDS	1887251	1888267	.	+	0	ID=cds-ABJ55291.1;Parent=gene-SPD_1918;Dbxref=NCBI_GP:ABJ55291.1;Name=ABJ55291.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2091%3B equivalent gene in S.pneumoniae R6 %3D spr1902%3B identified by match to protein family HMM PF01210%3B match to protein family HMM PF03721%3B match to protein family HMM PF07479;gbkey=CDS;gene=gpsA;locus_tag=SPD_1918;product=(NAD(P)+) glycerol-3-phosphate dehydrogenase;protein_id=ABJ55291.1;transl_table=11
CP000410.2	Genbank	gene	1888289	1889188	.	+	.	ID=gene-SPD_1919;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=SPD_1919
CP000410.2	Genbank	CDS	1888289	1889188	.	+	0	ID=cds-ABJ54488.1;Parent=gene-SPD_1919;Dbxref=NCBI_GP:ABJ54488.1;Name=ABJ54488.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2092%3B equivalent gene in S.pneumoniae R6 %3D spr1903%3B identified by match to protein family HMM PF00483%3B match to protein family HMM TIGR01099;gbkey=CDS;gene=galU;locus_tag=SPD_1919;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=ABJ54488.1;transl_table=11
CP000410.2	Genbank	gene	1889255	1889932	.	-	.	ID=gene-SPD_1920;Name=SPD_1920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1920
CP000410.2	Genbank	CDS	1889255	1889932	.	-	0	ID=cds-ABJ55159.1;Parent=gene-SPD_1920;Dbxref=NCBI_GP:ABJ55159.1;Name=ABJ55159.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2094%3B equivalent gene in S.pneumoniae R6 %3D spr1904%3B identified by match to protein family HMM PF01694;gbkey=CDS;locus_tag=SPD_1920;product=peptidase%2C S54 (rhomboid) family protein;protein_id=ABJ55159.1;transl_table=11
CP000410.2	Genbank	gene	1889916	1890455	.	-	.	ID=gene-SPD_1921;Name=SPD_1921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1921
CP000410.2	Genbank	CDS	1889916	1890455	.	-	0	ID=cds-ABJ54216.1;Parent=gene-SPD_1921;Dbxref=NCBI_GP:ABJ54216.1;Name=ABJ54216.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2095%3B equivalent gene in S.pneumoniae R6 %3D spr1905%3B identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727;gbkey=CDS;locus_tag=SPD_1921;product=5-formyltetrahydrofolate cyclo-ligase family protein;protein_id=ABJ54216.1;transl_table=11
CP000410.2	Genbank	gene	1890467	1891597	.	-	.	ID=gene-SPD_1922;Name=SPD_1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1922
CP000410.2	Genbank	CDS	1890467	1891597	.	-	0	ID=cds-ABJ53880.1;Parent=gene-SPD_1922;Dbxref=NCBI_GP:ABJ53880.1;Name=ABJ53880.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2096%3B equivalent gene in S.pneumoniae R6 %3D spr1906%3B identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=SPD_1922;product=peptidase%2C M20/M25/M40 family protein;protein_id=ABJ53880.1;transl_table=11
CP000410.2	Genbank	gene	1891665	1892363	.	-	.	ID=gene-SPD_1923;Name=SPD_1923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1923
CP000410.2	Genbank	CDS	1891665	1892363	.	-	0	ID=cds-ABJ54944.1;Parent=gene-SPD_1923;Dbxref=NCBI_GP:ABJ54944.1;Name=ABJ54944.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2097%3B equivalent gene in S.pneumoniae R6 %3D spr1907%3B identified by match to protein family HMM PF00132;gbkey=CDS;locus_tag=SPD_1923;product=2%2C3%2C4%2C5-tetrahydropyridine-2-carboxylate N-succinyltransferase%2C putative;protein_id=ABJ54944.1;transl_table=11
CP000410.2	Genbank	gene	1892593	1893504	.	-	.	ID=gene-SPD_1924;Name=SPD_1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1924
CP000410.2	Genbank	CDS	1892593	1893504	.	-	0	ID=cds-ABJ53966.1;Parent=gene-SPD_1924;Dbxref=NCBI_GP:ABJ53966.1;Name=ABJ53966.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2098%3B equivalent gene in S.pneumoniae R6 %3D spr1908%3B identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=SPD_1924;product=membrane protein%2C putative;protein_id=ABJ53966.1;transl_table=11
CP000410.2	Genbank	gene	1893569	1896034	.	-	.	ID=gene-SPD_1925;Name=pbp1B;gbkey=Gene;gene=pbp1B;gene_biotype=protein_coding;locus_tag=SPD_1925
CP000410.2	Genbank	CDS	1893569	1896034	.	-	0	ID=cds-ABJ54788.1;Parent=gene-SPD_1925;Dbxref=NCBI_GP:ABJ54788.1;Name=ABJ54788.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2099%3B equivalent gene in S.pneumoniae R6 %3D spr1909%3B identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912;gbkey=CDS;gene=pbp1B;locus_tag=SPD_1925;product=penicillin-binding protein 1B;protein_id=ABJ54788.1;transl_table=11
CP000410.2	Genbank	gene	1896176	1897432	.	+	.	ID=gene-SPD_1926;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=SPD_1926
CP000410.2	Genbank	CDS	1896176	1897432	.	+	0	ID=cds-ABJ54351.1;Parent=gene-SPD_1926;Dbxref=NCBI_GP:ABJ54351.1;Name=ABJ54351.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2100%3B equivalent gene in S.pneumoniae R6 %3D spr1910%3B identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234;gbkey=CDS;gene=tyrS;locus_tag=SPD_1926;product=tyrosyl-tRNA synthetase;protein_id=ABJ54351.1;transl_table=11
CP000410.2	Genbank	gene	1897510	1899573	.	-	.	ID=gene-SPD_1927;Name=SPD_1927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1927
CP000410.2	Genbank	CDS	1897510	1899573	.	-	0	ID=cds-ABJ55387.1;Parent=gene-SPD_1927;Dbxref=NCBI_GP:ABJ55387.1;Name=ABJ55387.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2101%3B equivalent gene in S.pneumoniae R6 %3D spr1911%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=SPD_1927;product=cation-transporting ATPase%2C E1-E2 family protein;protein_id=ABJ55387.1;transl_table=11
CP000410.2	Genbank	gene	1899575	1899886	.	-	.	ID=gene-SPD_1928;Name=SPD_1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1928
CP000410.2	Genbank	CDS	1899575	1899886	.	-	0	ID=cds-ABJ53845.1;Parent=gene-SPD_1928;Dbxref=NCBI_GP:ABJ53845.1;Name=ABJ53845.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2102%3B equivalent gene in S.pneumoniae R6 %3D spr1912;gbkey=CDS;locus_tag=SPD_1928;product=hypothetical protein;protein_id=ABJ53845.1;transl_table=11
CP000410.2	Genbank	gene	1900005	1900853	.	+	.	ID=gene-SPD_1929;Name=rrmA;gbkey=Gene;gene=rrmA;gene_biotype=protein_coding;locus_tag=SPD_1929
CP000410.2	Genbank	CDS	1900005	1900853	.	+	0	ID=cds-ABJ54978.1;Parent=gene-SPD_1929;Dbxref=NCBI_GP:ABJ54978.1;Name=ABJ54978.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2103%3B equivalent gene in S.pneumoniae R6 %3D spr1913;gbkey=CDS;gene=rrmA;locus_tag=SPD_1929;product=rRNA (guanine-N1-)-methyltransferase;protein_id=ABJ54978.1;transl_table=11
CP000410.2	Genbank	gene	1901369	1901575	.	-	.	ID=gene-SPD_1930;Name=SPD_1930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1930
CP000410.2	Genbank	CDS	1901369	1901575	.	-	0	ID=cds-ABJ54980.1;Parent=gene-SPD_1930;Dbxref=NCBI_GP:ABJ54980.1;Name=ABJ54980.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2104%3B equivalent gene in S.pneumoniae R6 %3D spr1914;gbkey=CDS;locus_tag=SPD_1930;product=hypothetical protein;protein_id=ABJ54980.1;transl_table=11
CP000410.2	Genbank	gene	1901652	1902224	.	+	.	ID=gene-SPD_1931;Name=SPD_1931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1931
CP000410.2	Genbank	CDS	1901652	1902224	.	+	0	ID=cds-ABJ53860.1;Parent=gene-SPD_1931;Dbxref=NCBI_GP:ABJ53860.1;Name=ABJ53860.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2105%3B equivalent gene in S.pneumoniae R6 %3D spr1915;gbkey=CDS;locus_tag=SPD_1931;product=hypothetical protein;protein_id=ABJ53860.1;transl_table=11
CP000410.2	Genbank	gene	1903269	1905527	.	-	.	ID=gene-SPD_1932;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=SPD_1932
CP000410.2	Genbank	CDS	1903269	1905527	.	-	0	ID=cds-ABJ54254.1;Parent=gene-SPD_1932;Dbxref=NCBI_GP:ABJ54254.1;Name=ABJ54254.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2106%3B equivalent gene in S.pneumoniae R6 %3D spr1916%3B identified by match to protein family HMM PF00343%3B match to protein family HMM TIGR02093;gbkey=CDS;gene=malP;locus_tag=SPD_1932;product=maltodextrin phosphorylase;protein_id=ABJ54254.1;transl_table=11
CP000410.2	Genbank	gene	1905553	1907070	.	-	.	ID=gene-SPD_1933;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=SPD_1933
CP000410.2	Genbank	CDS	1905553	1907070	.	-	0	ID=cds-ABJ55145.1;Parent=gene-SPD_1933;Dbxref=NCBI_GP:ABJ55145.1;Name=ABJ55145.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2107%3B equivalent gene in S.pneumoniae R6 %3D spr1917%3B identified by match to protein family HMM PF02446%3B match to protein family HMM TIGR00217;gbkey=CDS;gene=malQ;locus_tag=SPD_1933;product=4-alpha-glucanotransferase;protein_id=ABJ55145.1;transl_table=11
CP000410.2	Genbank	gene	1907620	1908891	.	+	.	ID=gene-SPD_1934;Name=malX;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=SPD_1934
CP000410.2	Genbank	CDS	1907620	1908891	.	+	0	ID=cds-ABJ55468.1;Parent=gene-SPD_1934;Dbxref=NCBI_GP:ABJ55468.1;Name=ABJ55468.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2108%3B equivalent gene in S.pneumoniae R6 %3D spr1918%3B identified by match to protein family HMM PF01547;gbkey=CDS;gene=malX;locus_tag=SPD_1934;product=maltose/maltodextrin ABC transporter%2C maltose/maltodextrin-binding protein;protein_id=ABJ55468.1;transl_table=11
CP000410.2	Genbank	gene	1909002	1910294	.	+	.	ID=gene-SPD_1935;Name=malC;gbkey=Gene;gene=malC;gene_biotype=protein_coding;locus_tag=SPD_1935
CP000410.2	Genbank	CDS	1909002	1910294	.	+	0	ID=cds-ABJ53685.1;Parent=gene-SPD_1935;Dbxref=NCBI_GP:ABJ53685.1;Name=ABJ53685.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2109%3B equivalent gene in S.pneumoniae R6 %3D spr1919%3B identified by match to protein family HMM PF00528%3B match to protein family HMM PF05154;gbkey=CDS;gene=malC;locus_tag=SPD_1935;product=maltodextrin ABC transporter%2C permease protein;protein_id=ABJ53685.1;transl_table=11
CP000410.2	Genbank	gene	1910296	1911138	.	+	.	ID=gene-SPD_1936;Name=malD;gbkey=Gene;gene=malD;gene_biotype=protein_coding;locus_tag=SPD_1936
CP000410.2	Genbank	CDS	1910296	1911138	.	+	0	ID=cds-ABJ55454.1;Parent=gene-SPD_1936;Dbxref=NCBI_GP:ABJ55454.1;Name=ABJ55454.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2110%3B equivalent gene in S.pneumoniae R6 %3D spr1920%3B identified by match to protein family HMM PF00528;gbkey=CDS;gene=malD;locus_tag=SPD_1936;product=maltodextrin ABC transporter%2C permease protein;protein_id=ABJ55454.1;transl_table=11
CP000410.2	Genbank	gene	1911391	1912191	.	+	.	ID=gene-SPD_1937;Name=malA;gbkey=Gene;gene=malA;gene_biotype=protein_coding;locus_tag=SPD_1937
CP000410.2	Genbank	CDS	1911391	1912191	.	+	0	ID=cds-ABJ54305.1;Parent=gene-SPD_1937;Dbxref=NCBI_GP:ABJ54305.1;Name=ABJ54305.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2111%3B equivalent gene in S.pneumoniae R6 %3D spr1921;gbkey=CDS;gene=malA;locus_tag=SPD_1937;product=maltodextrose utilization protein MalA;protein_id=ABJ54305.1;transl_table=11
CP000410.2	Genbank	gene	1912201	1913187	.	+	.	ID=gene-SPD_1938;Name=malR;gbkey=Gene;gene=malR;gene_biotype=protein_coding;locus_tag=SPD_1938
CP000410.2	Genbank	CDS	1912201	1913187	.	+	0	ID=cds-ABJ55187.1;Parent=gene-SPD_1938;Dbxref=NCBI_GP:ABJ55187.1;Name=ABJ55187.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2112%3B equivalent gene in S.pneumoniae R6 %3D spr1922%3B identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;gene=malR;locus_tag=SPD_1938;product=maltose operon transcriptional repressor;protein_id=ABJ55187.1;transl_table=11
CP000410.2	Genbank	gene	1913254	1913475	.	+	.	ID=gene-SPD_1939;Name=SPD_1939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1939
CP000410.2	Genbank	CDS	1913254	1913475	.	+	0	ID=cds-ABJ54092.1;Parent=gene-SPD_1939;Dbxref=NCBI_GP:ABJ54092.1;Name=ABJ54092.1;gbkey=CDS;locus_tag=SPD_1939;product=hypothetical protein;protein_id=ABJ54092.1;transl_table=11
CP000410.2	Genbank	gene	1913479	1914420	.	-	.	ID=gene-SPD_1940;Name=SPD_1940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1940
CP000410.2	Genbank	CDS	1913479	1914420	.	-	0	ID=cds-ABJ55441.1;Parent=gene-SPD_1940;Dbxref=NCBI_GP:ABJ55441.1;Name=ABJ55441.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2113%3B equivalent gene in S.pneumoniae R6 %3D spr1923%3B identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=SPD_1940;product=membrane protein%2C putative;protein_id=ABJ55441.1;transl_table=11
CP000410.2	Genbank	gene	1914398	1916161	.	-	.	ID=gene-SPD_1941;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=SPD_1941
CP000410.2	Genbank	CDS	1914398	1916161	.	-	0	ID=cds-ABJ54433.1;Parent=gene-SPD_1941;Dbxref=NCBI_GP:ABJ54433.1;Name=ABJ54433.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2114%3B equivalent gene in S.pneumoniae R6 %3D spr1924%3B identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459;gbkey=CDS;gene=aspS;locus_tag=SPD_1941;product=aspartyl-tRNA synthetase;protein_id=ABJ54433.1;transl_table=11
CP000410.2	Genbank	gene	1916280	1916471	.	-	.	ID=gene-SPD_1942;Name=SPD_1942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1942
CP000410.2	Genbank	CDS	1916280	1916471	.	-	0	ID=cds-ABJ54720.1;Parent=gene-SPD_1942;Dbxref=NCBI_GP:ABJ54720.1;Name=ABJ54720.1;gbkey=CDS;locus_tag=SPD_1942;product=hypothetical protein;protein_id=ABJ54720.1;transl_table=11
CP000410.2	Genbank	gene	1916513	1916743	.	-	.	ID=gene-SPD_1943;Name=SPD_1943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1943
CP000410.2	Genbank	CDS	1916513	1916743	.	-	0	ID=cds-ABJ53646.1;Parent=gene-SPD_1943;Dbxref=NCBI_GP:ABJ53646.1;Name=ABJ53646.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2115%3B equivalent gene in S.pneumoniae R6 %3D spr1925;gbkey=CDS;locus_tag=SPD_1943;product=hypothetical protein;protein_id=ABJ53646.1;transl_table=11
CP000410.2	Genbank	gene	1916761	1917402	.	-	.	ID=gene-SPD_1944;Name=SPD_1944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1944
CP000410.2	Genbank	CDS	1916761	1917402	.	-	0	ID=cds-ABJ54942.1;Parent=gene-SPD_1944;Dbxref=NCBI_GP:ABJ54942.1;Name=ABJ54942.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2116%3B equivalent gene in S.pneumoniae R6 %3D spr1926%3B identified by match to protein family HMM PF02517;gbkey=CDS;locus_tag=SPD_1944;product=CAAX amino terminal protease family protein;protein_id=ABJ54942.1;transl_table=11
CP000410.2	Genbank	gene	1917414	1918148	.	-	.	ID=gene-SPD_1945;Name=SPD_1945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1945
CP000410.2	Genbank	CDS	1917414	1918148	.	-	0	ID=cds-ABJ53908.1;Parent=gene-SPD_1945;Dbxref=NCBI_GP:ABJ53908.1;Name=ABJ53908.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2117%3B equivalent gene in S.pneumoniae R6 %3D spr1927;gbkey=CDS;locus_tag=SPD_1945;product=membrane protein%2C putative;protein_id=ABJ53908.1;transl_table=11
CP000410.2	Genbank	gene	1918151	1918348	.	-	.	ID=gene-SPD_1946;Name=SPD_1946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1946
CP000410.2	Genbank	CDS	1918151	1918348	.	-	0	ID=cds-ABJ55303.1;Parent=gene-SPD_1946;Dbxref=NCBI_GP:ABJ55303.1;Name=ABJ55303.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2118%3B equivalent gene in S.pneumoniae R6 %3D spr1928;gbkey=CDS;locus_tag=SPD_1946;product=hypothetical protein;protein_id=ABJ55303.1;transl_table=11
CP000410.2	Genbank	gene	1918348	1918554	.	-	.	ID=gene-SPD_1947;Name=SPD_1947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1947
CP000410.2	Genbank	CDS	1918348	1918554	.	-	0	ID=cds-ABJ54326.1;Parent=gene-SPD_1947;Dbxref=NCBI_GP:ABJ54326.1;Name=ABJ54326.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2119%3B equivalent gene in S.pneumoniae R6 %3D spr1929%3B identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=SPD_1947;product=transcriptional regulator%2C putative;protein_id=ABJ54326.1;transl_table=11
CP000410.2	Genbank	gene	1918564	1919028	.	-	.	ID=gene-SPD_1948;Name=SPD_1948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1948
CP000410.2	Genbank	CDS	1918564	1919028	.	-	0	ID=cds-ABJ53609.1;Parent=gene-SPD_1948;Dbxref=NCBI_GP:ABJ53609.1;Name=ABJ53609.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1930;gbkey=CDS;locus_tag=SPD_1948;product=hypothetical protein;protein_id=ABJ53609.1;transl_table=11
CP000410.2	Genbank	gene	1919028	1919207	.	-	.	ID=gene-SPD_1949;Name=SPD_1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1949
CP000410.2	Genbank	CDS	1919028	1919207	.	-	0	ID=cds-ABJ54669.1;Parent=gene-SPD_1949;Dbxref=NCBI_GP:ABJ54669.1;Name=ABJ54669.1;gbkey=CDS;locus_tag=SPD_1949;product=hypothetical protein;protein_id=ABJ54669.1;transl_table=11
CP000410.2	Genbank	gene	1919204	1920493	.	-	.	ID=gene-SPD_1950;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SPD_1950
CP000410.2	Genbank	CDS	1919204	1920493	.	-	0	ID=cds-ABJ54083.1;Parent=gene-SPD_1950;Dbxref=NCBI_GP:ABJ54083.1;Name=ABJ54083.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2121%3B equivalent gene in S.pneumoniae R6 %3D spr1931%3B identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442;gbkey=CDS;gene=hisS;locus_tag=SPD_1950;product=histidyl-tRNA synthetase;protein_id=ABJ54083.1;transl_table=11
CP000410.2	Genbank	gene	1920571	1921818	.	-	.	ID=gene-SPD_1951;Name=SPD_1951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1951
CP000410.2	Genbank	CDS	1920571	1921818	.	-	0	ID=cds-ABJ54883.1;Parent=gene-SPD_1951;Dbxref=NCBI_GP:ABJ54883.1;Name=ABJ54883.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2122%3B equivalent gene in S.pneumoniae R6 %3D spr1932%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_1951;product=transporter%2C major facilitator family protein;protein_id=ABJ54883.1;transl_table=11
CP000410.2	Genbank	gene	1922008	1922859	.	-	.	ID=gene-SPD_1952;Name=SPD_1952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1952
CP000410.2	Genbank	CDS	1922008	1922859	.	-	0	ID=cds-ABJ54225.1;Parent=gene-SPD_1952;Dbxref=NCBI_GP:ABJ54225.1;Name=ABJ54225.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1933%3B identified by match to protein family HMM TIGR01716;gbkey=CDS;locus_tag=SPD_1952;product=transcriptional activator%2C Rgg/GadR/MutR family protein%2C C-terminal domain;protein_id=ABJ54225.1;transl_table=11
CP000410.2	Genbank	gene	1922834	1922968	.	-	.	ID=gene-SPD_1953;Name=SPD_1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1953
CP000410.2	Genbank	CDS	1922834	1922968	.	-	0	ID=cds-ABJ55090.1;Parent=gene-SPD_1953;Dbxref=NCBI_GP:ABJ55090.1;Name=ABJ55090.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2124;gbkey=CDS;locus_tag=SPD_1953;product=hypothetical protein;protein_id=ABJ55090.1;transl_table=11
CP000410.2	Genbank	gene	1922983	1923324	.	+	.	ID=gene-SPD_1954;Name=SPD_1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1954
CP000410.2	Genbank	CDS	1922983	1923324	.	+	0	ID=cds-ABJ54429.1;Parent=gene-SPD_1954;Dbxref=NCBI_GP:ABJ54429.1;Name=ABJ54429.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2125%3B equivalent gene in S.pneumoniae R6 %3D spr1934%3B identified by match to protein family HMM PF01883;gbkey=CDS;locus_tag=SPD_1954;product=hypothetical protein;protein_id=ABJ54429.1;transl_table=11
CP000410.2	Genbank	gene	1923388	1923507	.	+	.	ID=gene-SPD_1955;Name=SPD_1955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1955
CP000410.2	Genbank	CDS	1923388	1923507	.	+	0	ID=cds-ABJ55066.1;Parent=gene-SPD_1955;Dbxref=NCBI_GP:ABJ55066.1;Name=ABJ55066.1;gbkey=CDS;locus_tag=SPD_1955;product=hypothetical protein;protein_id=ABJ55066.1;transl_table=11
CP000410.2	Genbank	gene	1923533	1925236	.	-	.	ID=gene-SPD_1956;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=SPD_1956
CP000410.2	Genbank	CDS	1923533	1925236	.	-	0	ID=cds-ABJ54861.1;Parent=gene-SPD_1956;Dbxref=NCBI_GP:ABJ54861.1;Name=ABJ54861.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2126%3B equivalent gene in S.pneumoniae R6 %3D spr1935%3B identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110;gbkey=CDS;gene=ilvD;locus_tag=SPD_1956;product=dihydroxy-acid dehydratase;protein_id=ABJ54861.1;transl_table=11
CP000410.2	Genbank	gene	1925469	1926401	.	-	.	ID=gene-SPD_1957;Name=SPD_1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1957
CP000410.2	Genbank	CDS	1925469	1926401	.	-	0	ID=cds-ABJ53671.1;Parent=gene-SPD_1957;Dbxref=NCBI_GP:ABJ53671.1;Name=ABJ53671.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2127%3B equivalent gene in S.pneumoniae R6 %3D spr1936%3B identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=SPD_1957;product=transketolase%2C C-terminal subunit;protein_id=ABJ53671.1;transl_table=11
CP000410.2	Genbank	gene	1926398	1927255	.	-	.	ID=gene-SPD_1958;Name=SPD_1958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1958
CP000410.2	Genbank	CDS	1926398	1927255	.	-	0	ID=cds-ABJ53633.1;Parent=gene-SPD_1958;Dbxref=NCBI_GP:ABJ53633.1;Name=ABJ53633.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2128%3B equivalent gene in S.pneumoniae R6 %3D spr1937%3B identified by match to protein family HMM PF00456;gbkey=CDS;locus_tag=SPD_1958;product=transketolase N-terminal subunit;protein_id=ABJ53633.1;transl_table=11
CP000410.2	Genbank	gene	1927259	1928605	.	-	.	ID=gene-SPD_1959;Name=SPD_1959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1959
CP000410.2	Genbank	CDS	1927259	1928605	.	-	0	ID=cds-ABJ54939.1;Parent=gene-SPD_1959;Dbxref=NCBI_GP:ABJ54939.1;Name=ABJ54939.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2129%3B equivalent gene in S.pneumoniae R6 %3D spr1938%3B identified by match to protein family HMM PF04215;gbkey=CDS;locus_tag=SPD_1959;product=PTS system%2C IIC component%2C putative;protein_id=ABJ54939.1;transl_table=11
CP000410.2	Genbank	gene	1928618	1928902	.	-	.	ID=gene-SPD_1960;Name=SPD_1960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1960
CP000410.2	Genbank	CDS	1928618	1928902	.	-	0	ID=cds-ABJ54352.1;Parent=gene-SPD_1960;Dbxref=NCBI_GP:ABJ54352.1;Name=ABJ54352.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2130%3B equivalent gene in S.pneumoniae R6 %3D spr1939%3B identified by match to protein family HMM PF02302;gbkey=CDS;locus_tag=SPD_1960;product=PTS system%2C IIB component%2C putative;protein_id=ABJ54352.1;transl_table=11
CP000410.2	Genbank	gene	1928906	1930936	.	-	.	ID=gene-SPD_1961;Name=SPD_1961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1961
CP000410.2	Genbank	CDS	1928906	1930936	.	-	0	ID=cds-ABJ54725.1;Parent=gene-SPD_1961;Dbxref=NCBI_GP:ABJ54725.1;Name=ABJ54725.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2131%3B equivalent gene in S.pneumoniae R6 %3D spr1940%3B identified by match to protein family HMM PF00359%3B match to protein family HMM PF00874;gbkey=CDS;locus_tag=SPD_1961;product=transcriptional regulator%2C BglG family protein;protein_id=ABJ54725.1;transl_table=11
CP000410.2	Genbank	gene	1931127	1932134	.	+	.	ID=gene-SPD_1962;Name=SPD_1962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1962
CP000410.2	Genbank	CDS	1931127	1932134	.	+	0	ID=cds-ABJ55497.1;Parent=gene-SPD_1962;Dbxref=NCBI_GP:ABJ55497.1;Name=ABJ55497.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2132%3B equivalent gene in S.pneumoniae R6 %3D spr1941%3B identified by match to protein family HMM PF01145;gbkey=CDS;locus_tag=SPD_1962;product=hypothetical protein;protein_id=ABJ55497.1;transl_table=11
CP000410.2	Genbank	gene	1932489	1932671	.	+	.	ID=gene-SPD_1963;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SPD_1963
CP000410.2	Genbank	CDS	1932489	1932671	.	+	0	ID=cds-ABJ54359.1;Parent=gene-SPD_1963;Dbxref=NCBI_GP:ABJ54359.1;Name=ABJ54359.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2134%3B equivalent gene in S.pneumoniae R6 %3D spr1943%3B identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031;gbkey=CDS;gene=rpmF;locus_tag=SPD_1963;product=ribosomal protein L32;protein_id=ABJ54359.1;transl_table=11
CP000410.2	Genbank	gene	1932687	1932836	.	+	.	ID=gene-SPD_1964;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SPD_1964
CP000410.2	Genbank	CDS	1932687	1932836	.	+	0	ID=cds-ABJ55204.1;Parent=gene-SPD_1964;Dbxref=NCBI_GP:ABJ55204.1;Name=ABJ55204.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2135%3B equivalent gene in S.pneumoniae R6 %3D spr1944%3B identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023;gbkey=CDS;gene=rpmG;locus_tag=SPD_1964;product=ribosomal protein L33;protein_id=ABJ55204.1;transl_table=11
CP000410.2	Genbank	gene	1933316	1935358	.	-	.	ID=gene-SPD_1965;Name=pcpA;gbkey=Gene;gene=pcpA;gene_biotype=protein_coding;locus_tag=SPD_1965
CP000410.2	Genbank	CDS	1933316	1935358	.	-	0	ID=cds-ABJ54096.1;Parent=gene-SPD_1965;Dbxref=NCBI_GP:ABJ54096.1;Name=ABJ54096.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2136%3B equivalent gene in S.pneumoniae R6 %3D spr1945%3B identified by match to protein family HMM PF01473;gbkey=CDS;gene=pcpA;locus_tag=SPD_1965;product=choline binding protein PcpA;protein_id=ABJ54096.1;transl_table=11
CP000410.2	Genbank	gene	1935715	1936284	.	+	.	ID=gene-SPD_1966;Name=SPD_1966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1966
CP000410.2	Genbank	CDS	1935715	1936284	.	+	0	ID=cds-ABJ54687.1;Parent=gene-SPD_1966;Dbxref=NCBI_GP:ABJ54687.1;Name=ABJ54687.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP0537%3B equivalent gene in S.pneumoniae R6 %3D spr1946%3B identified by match to protein family HMM PF04326;gbkey=CDS;locus_tag=SPD_1966;product=IS1381%2C transposase OrfA;protein_id=ABJ54687.1;transl_table=11
CP000410.2	Genbank	gene	1936310	1936699	.	+	.	ID=gene-SPD_1967;Name=SPD_1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1967
CP000410.2	Genbank	CDS	1936310	1936699	.	+	0	ID=cds-ABJ53645.1;Parent=gene-SPD_1967;Dbxref=NCBI_GP:ABJ53645.1;Name=ABJ53645.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP1086%3B equivalent gene in S.pneumoniae R6 %3D spr1947%3B identified by match to protein family HMM PF01609;gbkey=CDS;locus_tag=SPD_1967;product=IS1381%2C transposase OrfB;protein_id=ABJ53645.1;transl_table=11
CP000410.2	Genbank	gene	1936751	1937077	.	-	.	ID=gene-SPD_1968;Name=SPD_1968;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1968
CP000410.2	Genbank	CDS	1936751	1937077	.	-	0	ID=cds-ABJ54704.1;Parent=gene-SPD_1968;Dbxref=NCBI_GP:ABJ54704.1;Name=ABJ54704.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2139%3B equivalent gene in S.pneumoniae R6 %3D spr1948;gbkey=CDS;locus_tag=SPD_1968;product=hypothetical protein;protein_id=ABJ54704.1;transl_table=11
CP000410.2	Genbank	gene	1937403	1939283	.	-	.	ID=gene-SPD_1969;Name=SPD_1969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1969
CP000410.2	Genbank	CDS	1937403	1939283	.	-	0	ID=cds-ABJ54174.1;Parent=gene-SPD_1969;Dbxref=NCBI_GP:ABJ54174.1;Name=ABJ54174.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2141%3B equivalent gene in S.pneumoniae R6 %3D spr1949%3B identified by match to protein family HMM PF00728;gbkey=CDS;locus_tag=SPD_1969;product=glycosyl hydrolase-related protein;protein_id=ABJ54174.1;transl_table=11
CP000410.2	Genbank	gene	1939277	1940146	.	-	.	ID=gene-SPD_1970;Name=SPD_1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1970
CP000410.2	Genbank	CDS	1939277	1940146	.	-	0	ID=cds-ABJ55279.1;Parent=gene-SPD_1970;Dbxref=NCBI_GP:ABJ55279.1;Name=ABJ55279.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2142%3B equivalent gene in S.pneumoniae R6 %3D spr1950%3B identified by match to protein family HMM PF00480;gbkey=CDS;locus_tag=SPD_1970;product=ROK family protein;protein_id=ABJ55279.1;transl_table=11
CP000410.2	Genbank	gene	1940230	1942875	.	-	.	ID=gene-SPD_1971;Name=SPD_1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1971
CP000410.2	Genbank	CDS	1940230	1942875	.	-	0	ID=cds-ABJ54464.1;Parent=gene-SPD_1971;Dbxref=NCBI_GP:ABJ54464.1;Name=ABJ54464.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2143%3B equivalent gene in S.pneumoniae R6 %3D spr1951%3B identified by match to protein family HMM PF01074%3B match to protein family HMM PF07748;gbkey=CDS;locus_tag=SPD_1971;product=glycosyl hydrolase-related protein;protein_id=ABJ54464.1;transl_table=11
CP000410.2	Genbank	gene	1942966	1944246	.	-	.	ID=gene-SPD_1972;Name=SPD_1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1972
CP000410.2	Genbank	CDS	1942966	1944246	.	-	0	ID=cds-ABJ55325.1;Parent=gene-SPD_1972;Dbxref=NCBI_GP:ABJ55325.1;Name=ABJ55325.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2144%3B equivalent gene in S.pneumoniae R6 %3D spr1952%3B identified by match to protein family HMM PF06824;gbkey=CDS;locus_tag=SPD_1972;product=hypothetical protein;protein_id=ABJ55325.1;transl_table=11
CP000410.2	Genbank	gene	1944417	1946501	.	+	.	ID=gene-SPD_1973;Name=SPD_1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1973
CP000410.2	Genbank	CDS	1944417	1946501	.	+	0	ID=cds-ABJ54198.1;Parent=gene-SPD_1973;Dbxref=NCBI_GP:ABJ54198.1;Name=ABJ54198.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2145%3B equivalent gene in S.pneumoniae R6 %3D spr1953%3B identified by match to protein family HMM PF07971%3B match to protein family HMM TIGR01180;gbkey=CDS;locus_tag=SPD_1973;product=alpha-1%2C2-mannosidase%2C putative;protein_id=ABJ54198.1;transl_table=11
CP000410.2	Genbank	gene	1946541	1948220	.	-	.	ID=gene-SPD_1974;Name=SPD_1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1974
CP000410.2	Genbank	CDS	1946541	1948220	.	-	0	ID=cds-ABJ55252.1;Parent=gene-SPD_1974;Dbxref=NCBI_GP:ABJ55252.1;Name=ABJ55252.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2146%3B equivalent gene in S.pneumoniae R6 %3D spr1954%3B identified by match to protein family HMM PF00754;gbkey=CDS;locus_tag=SPD_1974;product=hypothetical protein;protein_id=ABJ55252.1;transl_table=11
CP000410.2	Genbank	pseudogene	1948981	1950214	.	+	.	ID=gene-SPD_1975;Name=arcA;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2148%3B equivalent gene in S.pneumoniae R6 %3D spr1955. This gene has the same framshit mutation at about amino acid 245 as does R6 relative to TIGR4%3B arginine deiminase%2C authentic framshift;gbkey=Gene;gene=arcA;gene_biotype=pseudogene;locus_tag=SPD_1975;pseudo=true
CP000410.2	Genbank	gene	1950272	1951288	.	+	.	ID=gene-SPD_1976;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=SPD_1976
CP000410.2	Genbank	CDS	1950272	1951288	.	+	0	ID=cds-ABJ54469.1;Parent=gene-SPD_1976;Dbxref=NCBI_GP:ABJ54469.1;Name=ABJ54469.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2150%3B equivalent gene in S.pneumoniae R6 %3D spr1957%3B identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00658;gbkey=CDS;gene=argF;locus_tag=SPD_1976;product=ornithine carbamoyltransferase;protein_id=ABJ54469.1;transl_table=11
CP000410.2	Genbank	gene	1951453	1952400	.	+	.	ID=gene-SPD_1977;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=SPD_1977
CP000410.2	Genbank	CDS	1951453	1952400	.	+	0	ID=cds-ABJ55496.1;Parent=gene-SPD_1977;Dbxref=NCBI_GP:ABJ55496.1;Name=ABJ55496.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2151%3B equivalent gene in S.pneumoniae R6 %3D spr1958%3B identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR00746;gbkey=CDS;gene=arcC;locus_tag=SPD_1977;product=carbamate kinase;protein_id=ABJ55496.1;transl_table=11
CP000410.2	Genbank	gene	1952609	1954120	.	+	.	ID=gene-SPD_1978;Name=SPD_1978;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1978
CP000410.2	Genbank	CDS	1952609	1954120	.	+	0	ID=cds-ABJ54396.1;Parent=gene-SPD_1978;Dbxref=NCBI_GP:ABJ54396.1;Name=ABJ54396.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2152%3B equivalent gene in S.pneumoniae R6 %3D spr1959%3B identified by match to protein family HMM PF03606;gbkey=CDS;locus_tag=SPD_1978;product=membrane protein%2C putative;protein_id=ABJ54396.1;transl_table=11
CP000410.2	Genbank	gene	1954142	1955473	.	+	.	ID=gene-SPD_1979;Name=SPD_1979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1979
CP000410.2	Genbank	CDS	1954142	1955473	.	+	0	ID=cds-ABJ54737.1;Parent=gene-SPD_1979;Dbxref=NCBI_GP:ABJ54737.1;Name=ABJ54737.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2153%3B equivalent gene in S.pneumoniae R6 %3D spr1960%3B identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01887;gbkey=CDS;locus_tag=SPD_1979;product=peptidase%2C M20/M25/M40 family protein;protein_id=ABJ54737.1;transl_table=11
CP000410.2	Genbank	pseudogene	1955567	1955695	.	+	.	ID=gene-SPD_1980;Name=SPD_1980;Note=equivalent gene in S.pneumoniae TIGR4 SP2154%3B IS3-Spn1%2C hypothetical protein%2C interruption;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_1980;pseudo=true
CP000410.2	Genbank	gene	1955878	1956168	.	-	.	ID=gene-SPD_1981;Name=SPD_1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1981
CP000410.2	Genbank	CDS	1955878	1956168	.	-	0	ID=cds-ABJ54837.1;Parent=gene-SPD_1981;Dbxref=NCBI_GP:ABJ54837.1;Name=ABJ54837.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1961;gbkey=CDS;locus_tag=SPD_1981;product=hypothetical protein;protein_id=ABJ54837.1;transl_table=11
CP000410.2	Genbank	gene	1956156	1956305	.	-	.	ID=gene-SPD_1982;Name=SPD_1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1982
CP000410.2	Genbank	CDS	1956156	1956305	.	-	0	ID=cds-ABJ55197.1;Parent=gene-SPD_1982;Dbxref=NCBI_GP:ABJ55197.1;Name=ABJ55197.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_1982;product=hypothetical protein;protein_id=ABJ55197.1;transl_table=11
CP000410.2	Genbank	gene	1956591	1956770	.	+	.	ID=gene-SPD_1983;Name=SPD_1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1983
CP000410.2	Genbank	CDS	1956591	1956770	.	+	0	ID=cds-ABJ54120.1;Parent=gene-SPD_1983;Dbxref=NCBI_GP:ABJ54120.1;Name=ABJ54120.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1214;gbkey=CDS;locus_tag=SPD_1983;product=hypothetical protein;protein_id=ABJ54120.1;transl_table=11
CP000410.2	Genbank	gene	1956807	1957706	.	-	.	ID=gene-SPD_1984;Name=SPD_1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1984
CP000410.2	Genbank	CDS	1956807	1957706	.	-	0	ID=cds-ABJ54973.1;Parent=gene-SPD_1984;Dbxref=NCBI_GP:ABJ54973.1;Name=ABJ54973.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2156%3B equivalent gene in S.pneumoniae R6 %3D spr1962%3B identified by match to protein family HMM PF01145;gbkey=CDS;locus_tag=SPD_1984;product=hypersensitive-induced reaction protein 4;protein_id=ABJ54973.1;transl_table=11
CP000410.2	Genbank	gene	1957836	1958987	.	-	.	ID=gene-SPD_1985;Name=SPD_1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1985
CP000410.2	Genbank	CDS	1957836	1958987	.	-	0	ID=cds-ABJ53857.1;Parent=gene-SPD_1985;Dbxref=NCBI_GP:ABJ53857.1;Name=ABJ53857.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2157%3B equivalent gene in S.pneumoniae R6 %3D spr1963%3B identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=SPD_1985;product=alcohol dehydrogenase%2C iron-containing;protein_id=ABJ53857.1;transl_table=11
CP000410.2	Genbank	gene	1959133	1960899	.	-	.	ID=gene-SPD_1986;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=SPD_1986
CP000410.2	Genbank	CDS	1959133	1960899	.	-	0	ID=cds-ABJ54752.1;Parent=gene-SPD_1986;Dbxref=NCBI_GP:ABJ54752.1;Name=ABJ54752.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2158%3B equivalent gene in S.pneumoniae R6 %3D spr1964%3B identified by match to protein family HMM PF02952%3B match to protein family HMM PF07881%3B match to protein family HMM PF07882%3B match to protein family HMM TIGR01089;gbkey=CDS;gene=fucI;locus_tag=SPD_1986;product=L-fucose isomerase;protein_id=ABJ54752.1;transl_table=11
CP000410.2	Genbank	gene	1960956	1964072	.	-	.	ID=gene-SPD_1987;Name=SPD_1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1987
CP000410.2	Genbank	CDS	1960956	1964072	.	-	0	ID=cds-ABJ53832.1;Parent=gene-SPD_1987;Dbxref=NCBI_GP:ABJ53832.1;Name=ABJ53832.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2159%3B equivalent gene in S.pneumoniae R6 %3D spr1965%3B identified by match to protein family HMM PF00754;gbkey=CDS;locus_tag=SPD_1987;product=fucolectin-related protein;protein_id=ABJ53832.1;transl_table=11
CP000410.2	Genbank	gene	1964082	1966376	.	-	.	ID=gene-SPD_1988;Name=SPD_1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1988
CP000410.2	Genbank	CDS	1964082	1966376	.	-	0	ID=cds-ABJ55508.1;Parent=gene-SPD_1988;Dbxref=NCBI_GP:ABJ55508.1;Name=ABJ55508.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2160%3B equivalent gene in S.pneumoniae R6 %3D spr1966;gbkey=CDS;locus_tag=SPD_1988;product=hypothetical protein;protein_id=ABJ55508.1;transl_table=11
CP000410.2	Genbank	gene	1966435	1967235	.	-	.	ID=gene-SPD_1989;Name=SPD_1989;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1989
CP000410.2	Genbank	CDS	1966435	1967235	.	-	0	ID=cds-ABJ54442.1;Parent=gene-SPD_1989;Dbxref=NCBI_GP:ABJ54442.1;Name=ABJ54442.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2161%3B equivalent gene in S.pneumoniae R6 %3D spr1967%3B identified by match to protein family HMM PF03613;gbkey=CDS;locus_tag=SPD_1989;product=PTS system%2C IID component;protein_id=ABJ54442.1;transl_table=11
CP000410.2	Genbank	gene	1967232	1968005	.	-	.	ID=gene-SPD_1990;Name=SPD_1990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1990
CP000410.2	Genbank	CDS	1967232	1968005	.	-	0	ID=cds-ABJ55267.1;Parent=gene-SPD_1990;Dbxref=NCBI_GP:ABJ55267.1;Name=ABJ55267.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2162%3B equivalent gene in S.pneumoniae R6 %3D spr1968%3B identified by match to protein family HMM PF03609;gbkey=CDS;locus_tag=SPD_1990;product=PTS system%2C IIC component;protein_id=ABJ55267.1;transl_table=11
CP000410.2	Genbank	gene	1968030	1968500	.	-	.	ID=gene-SPD_1991;Name=SPD_1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1991
CP000410.2	Genbank	CDS	1968030	1968500	.	-	0	ID=cds-ABJ54255.1;Parent=gene-SPD_1991;Dbxref=NCBI_GP:ABJ54255.1;Name=ABJ54255.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2163%3B equivalent gene in S.pneumoniae R6 %3D spr1969%3B identified by match to protein family HMM PF03830;gbkey=CDS;locus_tag=SPD_1991;product=PTS system%2C IIB component;protein_id=ABJ54255.1;transl_table=11
CP000410.2	Genbank	gene	1968491	1968934	.	-	.	ID=gene-SPD_1992;Name=SPD_1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1992
CP000410.2	Genbank	CDS	1968491	1968934	.	-	0	ID=cds-ABJ55479.1;Parent=gene-SPD_1992;Dbxref=NCBI_GP:ABJ55479.1;Name=ABJ55479.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2164%3B equivalent gene in S.pneumoniae R6 %3D spr1970%3B identified by match to protein family HMM PF03610;gbkey=CDS;locus_tag=SPD_1992;product=PTS system%2C IIA component;protein_id=ABJ55479.1;transl_table=11
CP000410.2	Genbank	gene	1968915	1969355	.	-	.	ID=gene-SPD_1993;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=SPD_1993
CP000410.2	Genbank	CDS	1968915	1969355	.	-	0	ID=cds-ABJ54424.1;Parent=gene-SPD_1993;Dbxref=NCBI_GP:ABJ54424.1;Name=ABJ54424.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2165%3B equivalent gene in S.pneumoniae R6 %3D spr1971%3B identified by match to protein family HMM PF05025;gbkey=CDS;gene=fucU;locus_tag=SPD_1993;product=RbsD/FucU transport protein family protein;protein_id=ABJ54424.1;transl_table=11
CP000410.2	Genbank	gene	1969367	1970005	.	-	.	ID=gene-SPD_1994;Name=fucA;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=SPD_1994
CP000410.2	Genbank	CDS	1969367	1970005	.	-	0	ID=cds-ABJ55065.1;Parent=gene-SPD_1994;Dbxref=NCBI_GP:ABJ55065.1;Name=ABJ55065.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2166%3B equivalent gene in S.pneumoniae R6 %3D spr1972%3B identified by match to protein family HMM PF00596;gbkey=CDS;gene=fucA;locus_tag=SPD_1994;product=L-fuculose phosphate aldolase;protein_id=ABJ55065.1;transl_table=11
CP000410.2	Genbank	gene	1970120	1971523	.	-	.	ID=gene-SPD_1995;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=SPD_1995
CP000410.2	Genbank	CDS	1970120	1971523	.	-	0	ID=cds-ABJ54947.1;Parent=gene-SPD_1995;Dbxref=NCBI_GP:ABJ54947.1;Name=ABJ54947.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2167%3B equivalent gene in S.pneumoniae R6 %3D spr1973%3B identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;gene=fucK;locus_tag=SPD_1995;product=L-fuculose kinase FucK%2C putative;protein_id=ABJ54947.1;transl_table=11
CP000410.2	Genbank	gene	1971699	1972472	.	+	.	ID=gene-SPD_1996;Name=SPD_1996;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_1996
CP000410.2	Genbank	CDS	1971699	1972472	.	+	0	ID=cds-ABJ55430.1;Parent=gene-SPD_1996;Dbxref=NCBI_GP:ABJ55430.1;Name=ABJ55430.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2168%3B equivalent gene in S.pneumoniae R6 %3D spr1974%3B identified by match to protein family HMM PF00455%3B match to protein family HMM PF08220;gbkey=CDS;locus_tag=SPD_1996;product=fucose operon repressor%2C putative;protein_id=ABJ55430.1;transl_table=11
CP000410.2	Genbank	gene	1973601	1975106	.	-	.	ID=gene-SPD_1997;Name=adcA;gbkey=Gene;gene=adcA;gene_biotype=protein_coding;locus_tag=SPD_1997
CP000410.2	Genbank	CDS	1973601	1975106	.	-	0	ID=cds-ABJ54356.1;Parent=gene-SPD_1997;Dbxref=NCBI_GP:ABJ54356.1;Name=ABJ54356.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2169%3B equivalent gene in S.pneumoniae R6 %3D spr1975%3B identified by match to protein family HMM PF01297;gbkey=CDS;gene=adcA;locus_tag=SPD_1997;product=zinc ABC transporter%2C zinc-binding lipoprotein;protein_id=ABJ54356.1;transl_table=11
CP000410.2	Genbank	gene	1975116	1975922	.	-	.	ID=gene-SPD_1998;Name=adcB;gbkey=Gene;gene=adcB;gene_biotype=protein_coding;locus_tag=SPD_1998
CP000410.2	Genbank	CDS	1975116	1975922	.	-	0	ID=cds-ABJ54665.1;Parent=gene-SPD_1998;Dbxref=NCBI_GP:ABJ54665.1;Name=ABJ54665.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2170%3B equivalent gene in S.pneumoniae R6 %3D spr1976%3B identified by match to protein family HMM PF00950;gbkey=CDS;gene=adcB;locus_tag=SPD_1998;product=zinc ABC transporter%2C permease protein;protein_id=ABJ54665.1;transl_table=11
CP000410.2	Genbank	gene	1975915	1976619	.	-	.	ID=gene-SPD_1999;Name=adcC;gbkey=Gene;gene=adcC;gene_biotype=protein_coding;locus_tag=SPD_1999
CP000410.2	Genbank	CDS	1975915	1976619	.	-	0	ID=cds-ABJ54538.1;Parent=gene-SPD_1999;Dbxref=NCBI_GP:ABJ54538.1;Name=ABJ54538.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2171%3B equivalent gene in S.pneumoniae R6 %3D spr1977%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=adcC;locus_tag=SPD_1999;product=zinc ABC transporter%2C ATP-binding protein;protein_id=ABJ54538.1;transl_table=11
CP000410.2	Genbank	gene	1976619	1977059	.	-	.	ID=gene-SPD_2000;Name=adcR;gbkey=Gene;gene=adcR;gene_biotype=protein_coding;locus_tag=SPD_2000
CP000410.2	Genbank	CDS	1976619	1977059	.	-	0	ID=cds-ABJ54931.1;Parent=gene-SPD_2000;Dbxref=NCBI_GP:ABJ54931.1;Name=ABJ54931.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2172%3B equivalent gene in S.pneumoniae R6 %3D spr1978%3B identified by match to protein family HMM PF01022%3B match to protein family HMM PF01047%3B match to protein family HMM PF01325%3B match to protein family HMM PF01978;gbkey=CDS;gene=adcR;locus_tag=SPD_2000;product=adc operon repressor AdcR;protein_id=ABJ54931.1;transl_table=11
CP000410.2	Genbank	gene	1977044	1977181	.	+	.	ID=gene-SPD_2001;Name=SPD_2001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2001
CP000410.2	Genbank	CDS	1977044	1977181	.	+	0	ID=cds-ABJ53865.1;Parent=gene-SPD_2001;Dbxref=NCBI_GP:ABJ53865.1;Name=ABJ53865.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_2001;product=hypothetical protein;protein_id=ABJ53865.1;transl_table=11
CP000410.2	Genbank	gene	1977214	1978482	.	-	.	ID=gene-SPD_2002;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=SPD_2002
CP000410.2	Genbank	CDS	1977214	1978482	.	-	0	ID=cds-ABJ54237.1;Parent=gene-SPD_2002;Dbxref=NCBI_GP:ABJ54237.1;Name=ABJ54237.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2173%3B equivalent gene in S.pneumoniae R6 %3D spr1979%3B identified by match to protein family HMM PF04914%3B match to protein family HMM PF04915%3B match to protein family HMM PF04918;gbkey=CDS;gene=dltD;locus_tag=SPD_2002;product=undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein;protein_id=ABJ54237.1;transl_table=11
CP000410.2	Genbank	gene	1978475	1978714	.	-	.	ID=gene-SPD_2003;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=SPD_2003
CP000410.2	Genbank	CDS	1978475	1978714	.	-	0	ID=cds-ABJ55105.1;Parent=gene-SPD_2003;Dbxref=NCBI_GP:ABJ55105.1;Name=ABJ55105.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2174%3B equivalent gene in S.pneumoniae R6 %3D spr1980%3B identified by match to protein family HMM TIGR01688;gbkey=CDS;gene=dltC;locus_tag=SPD_2003;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=ABJ55105.1;transl_table=11
CP000410.2	Genbank	gene	1978728	1979972	.	-	.	ID=gene-SPD_2004;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=SPD_2004
CP000410.2	Genbank	CDS	1978728	1979972	.	-	0	ID=cds-ABJ53733.1;Parent=gene-SPD_2004;Dbxref=NCBI_GP:ABJ53733.1;Name=ABJ53733.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2175%3B equivalent gene in S.pneumoniae R6 %3D spr1981%3B identified by match to protein family HMM PF03062;gbkey=CDS;gene=dltB;locus_tag=SPD_2004;product=protein DltB;protein_id=ABJ53733.1;transl_table=11
CP000410.2	Genbank	gene	1979969	1981519	.	-	.	ID=gene-SPD_2005;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=SPD_2005
CP000410.2	Genbank	CDS	1979969	1981519	.	-	0	ID=cds-ABJ54767.1;Parent=gene-SPD_2005;Dbxref=NCBI_GP:ABJ54767.1;Name=ABJ54767.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2176%3B equivalent gene in S.pneumoniae R6 %3D spr1982%3B identified by match to protein family HMM PF00501%3B match to protein family HMM TIGR01733%3B match to protein family HMM TIGR01734;gbkey=CDS;gene=dltA;locus_tag=SPD_2005;product=D-alanine--poly(phosphoribitol) ligase subunit 1;protein_id=ABJ54767.1;transl_table=11
CP000410.2	Genbank	gene	1981540	1981671	.	-	.	ID=gene-SPD_2006;Name=SPD_2006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2006
CP000410.2	Genbank	CDS	1981540	1981671	.	-	0	ID=cds-ABJ54350.1;Parent=gene-SPD_2006;Dbxref=NCBI_GP:ABJ54350.1;Name=ABJ54350.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2177;gbkey=CDS;locus_tag=SPD_2006;product=hypothetical protein;protein_id=ABJ54350.1;transl_table=11
CP000410.2	Genbank	gene	1981985	1983163	.	-	.	ID=gene-SPD_2007;Name=SPD_2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2007
CP000410.2	Genbank	CDS	1981985	1983163	.	-	0	ID=cds-ABJ55456.1;Parent=gene-SPD_2007;Dbxref=NCBI_GP:ABJ55456.1;Name=ABJ55456.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2180%3B equivalent gene in S.pneumoniae R6 %3D spr1983%3B identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=SPD_2007;product=transporter%2C major facilitator family protein;protein_id=ABJ55456.1;transl_table=11
CP000410.2	Genbank	pseudogene	1983619	1984896	.	-	.	ID=gene-SPD_2008;Name=SPD_2008;Note=equivalent gene in S.pneumoniae R6 %3D spr1985%3B group II intron%2C maturase%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_2008;pseudo=true
CP000410.2	Genbank	gene	1986007	1986594	.	+	.	ID=gene-SPD_2009;Name=SPD_2009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2009
CP000410.2	Genbank	CDS	1986007	1986594	.	+	0	ID=cds-ABJ54784.1;Parent=gene-SPD_2009;Dbxref=NCBI_GP:ABJ54784.1;Name=ABJ54784.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2182%3B equivalent gene in S.pneumoniae R6 %3D spr1986;gbkey=CDS;locus_tag=SPD_2009;product=hypothetical protein;protein_id=ABJ54784.1;transl_table=11
CP000410.2	Genbank	gene	1986681	1986827	.	-	.	ID=gene-SPD_2010;Name=SPD_2010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2010
CP000410.2	Genbank	CDS	1986681	1986827	.	-	0	ID=cds-ABJ53993.1;Parent=gene-SPD_2010;Dbxref=NCBI_GP:ABJ53993.1;Name=ABJ53993.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2183%3B equivalent gene in S.pneumoniae R6 %3D spr1987;gbkey=CDS;locus_tag=SPD_2010;product=hypothetical protein;protein_id=ABJ53993.1;transl_table=11
CP000410.2	Genbank	gene	1987075	1987779	.	-	.	ID=gene-SPD_2011;Name=glpF;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=SPD_2011
CP000410.2	Genbank	CDS	1987075	1987779	.	-	0	ID=cds-ABJ54604.1;Parent=gene-SPD_2011;Dbxref=NCBI_GP:ABJ54604.1;Name=ABJ54604.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2184%3B equivalent gene in S.pneumoniae R6 %3D spr1988%3B identified by match to protein family HMM PF00230%3B match to protein family HMM TIGR00861;gbkey=CDS;gene=glpF;locus_tag=SPD_2011;product=glycerol uptake facilitator protein;protein_id=ABJ54604.1;transl_table=11
CP000410.2	Genbank	gene	1987849	1989675	.	-	.	ID=gene-SPD_2012;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=protein_coding;locus_tag=SPD_2012
CP000410.2	Genbank	CDS	1987849	1989675	.	-	0	ID=cds-ABJ54535.1;Parent=gene-SPD_2012;Dbxref=NCBI_GP:ABJ54535.1;Name=ABJ54535.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2185%3B equivalent gene in S.pneumoniae R6 %3D spr1990%3B identified by match to protein family HMM PF01266;gbkey=CDS;gene=glpO;locus_tag=SPD_2012;product=alpha-glycerophosphate oxidase;protein_id=ABJ54535.1;transl_table=11
CP000410.2	Genbank	gene	1989717	1991225	.	-	.	ID=gene-SPD_2013;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=SPD_2013
CP000410.2	Genbank	CDS	1989717	1991225	.	-	0	ID=cds-ABJ54508.1;Parent=gene-SPD_2013;Dbxref=NCBI_GP:ABJ54508.1;Name=ABJ54508.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2186%3B equivalent gene in S.pneumoniae R6 %3D spr1991%3B identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311;gbkey=CDS;gene=glpK;locus_tag=SPD_2013;product=glycerol kinase;protein_id=ABJ54508.1;transl_table=11
CP000410.2	Genbank	gene	1991384	1992811	.	-	.	ID=gene-SPD_2014;Name=SPD_2014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2014
CP000410.2	Genbank	CDS	1991384	1992811	.	-	0	ID=cds-ABJ55010.1;Parent=gene-SPD_2014;Dbxref=NCBI_GP:ABJ55010.1;Name=ABJ55010.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2187%3B equivalent gene in S.pneumoniae R6 %3D spr1992%3B identified by match to protein family HMM PF05043;gbkey=CDS;locus_tag=SPD_2014;product=hypothetical protein;protein_id=ABJ55010.1;transl_table=11
CP000410.2	Genbank	gene	1992976	1993848	.	+	.	ID=gene-SPD_2015;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SPD_2015
CP000410.2	Genbank	CDS	1992976	1993848	.	+	0	ID=cds-ABJ54265.1;Parent=gene-SPD_2015;Dbxref=NCBI_GP:ABJ54265.1;Name=ABJ54265.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2188%3B equivalent gene in S.pneumoniae R6 %3D spr1993%3B identified by match to protein family HMM PF01430;gbkey=CDS;gene=hslO;locus_tag=SPD_2015;product=chaperonin%2C 33 kDa;protein_id=ABJ54265.1;transl_table=11
CP000410.2	Genbank	gene	1993859	1994815	.	+	.	ID=gene-SPD_2016;Name=SPD_2016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2016
CP000410.2	Genbank	CDS	1993859	1994815	.	+	0	ID=cds-ABJ54758.1;Parent=gene-SPD_2016;Dbxref=NCBI_GP:ABJ54758.1;Name=ABJ54758.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2189%3B equivalent gene in S.pneumoniae R6 %3D spr1994%3B identified by match to protein family HMM PF01180%3B match to protein family HMM PF01207%3B match to protein family HMM TIGR00737;gbkey=CDS;locus_tag=SPD_2016;product=TIM-barrel protein%2C nifR3 family protein%2C putative;protein_id=ABJ54758.1;transl_table=11
CP000410.2	Genbank	gene	1995045	1997150	.	-	.	ID=gene-SPD_2017;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=SPD_2017
CP000410.2	Genbank	CDS	1995045	1997150	.	-	0	ID=cds-ABJ53655.1;Parent=gene-SPD_2017;Dbxref=NCBI_GP:ABJ53655.1;Name=ABJ53655.1;Note=equivalent gene in S.pneumoniae R6 %3D spr1995 This gene is also called SpsA%2C pspC (pneumococcal surface protein C)and Hic%3B identified by match to protein family HMM PF01473%3B match to protein family HMM PF04650%3B match to protein family HMM PF05062%3B match to protein family HMM TIGR01168;gbkey=CDS;gene=cbpA;locus_tag=SPD_2017;product=choline binding protein A;protein_id=ABJ53655.1;transl_table=11
CP000410.2	Genbank	gene	1997229	1997756	.	-	.	ID=gene-SPD_2018;Name=SPD_2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2018
CP000410.2	Genbank	CDS	1997229	1997756	.	-	0	ID=cds-ABJ54914.1;Parent=gene-SPD_2018;Dbxref=NCBI_GP:ABJ54914.1;Name=ABJ54914.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2191%3B equivalent gene in S.pneumoniae R6 %3D spr1996%3B identified by match to protein family HMM PF04140;gbkey=CDS;locus_tag=SPD_2018;product=isoprenylcysteine carboxyl methyltransferase (ICMT) family protein;protein_id=ABJ54914.1;transl_table=11
CP000410.2	Genbank	gene	1997839	1999170	.	-	.	ID=gene-SPD_2019;Name=SPD_2019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2019
CP000410.2	Genbank	CDS	1997839	1999170	.	-	0	ID=cds-ABJ54017.1;Parent=gene-SPD_2019;Dbxref=NCBI_GP:ABJ54017.1;Name=ABJ54017.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2192%3B equivalent gene in S.pneumoniae R6 %3D spr1997%3B identified by match to protein family HMM PF00512%3B match to protein family HMM PF00672%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=SPD_2019;product=sensor histidine kinase;protein_id=ABJ54017.1;transl_table=11
CP000410.2	Genbank	gene	1999167	1999820	.	-	.	ID=gene-SPD_2020;Name=SPD_2020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2020
CP000410.2	Genbank	CDS	1999167	1999820	.	-	0	ID=cds-ABJ54595.1;Parent=gene-SPD_2020;Dbxref=NCBI_GP:ABJ54595.1;Name=ABJ54595.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2193%3B equivalent gene in S.pneumoniae R6 %3D spr1998%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=SPD_2020;product=DNA-binding response regulator;protein_id=ABJ54595.1;transl_table=11
CP000410.2	Genbank	gene	2000109	2000243	.	-	.	ID=gene-SPD_2021;Name=SPD_2021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2021
CP000410.2	Genbank	CDS	2000109	2000243	.	-	0	ID=cds-ABJ53747.1;Parent=gene-SPD_2021;Dbxref=NCBI_GP:ABJ53747.1;Name=ABJ53747.1;Note=identified by Glimmer2%3B putative;gbkey=CDS;locus_tag=SPD_2021;product=hypothetical protein;protein_id=ABJ53747.1;transl_table=11
CP000410.2	Genbank	gene	2000462	2002894	.	-	.	ID=gene-SPD_2022;Name=SPD_2022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2022
CP000410.2	Genbank	CDS	2000462	2002894	.	-	0	ID=cds-ABJ54365.1;Parent=gene-SPD_2022;Dbxref=NCBI_GP:ABJ54365.1;Name=ABJ54365.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2194%3B equivalent gene in S.pneumoniae R6 %3D spr2000%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861%3B match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;locus_tag=SPD_2022;product=ATP-dependent Clp protease%2C ATP-binding subunit;protein_id=ABJ54365.1;transl_table=11
CP000410.2	Genbank	gene	2002896	2003354	.	-	.	ID=gene-SPD_2023;Name=ctsR;gbkey=Gene;gene=ctsR;gene_biotype=protein_coding;locus_tag=SPD_2023
CP000410.2	Genbank	CDS	2002896	2003354	.	-	0	ID=cds-ABJ54732.1;Parent=gene-SPD_2023;Dbxref=NCBI_GP:ABJ54732.1;Name=ABJ54732.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2195%3B equivalent gene in S.pneumoniae R6 %3D spr2001%3B identified by match to protein family HMM PF05848;gbkey=CDS;gene=ctsR;locus_tag=SPD_2023;product=transcriptional regulator CtsR;protein_id=ABJ54732.1;transl_table=11
CP000410.2	Genbank	gene	2003473	2004201	.	-	.	ID=gene-SPD_2024;Name=SPD_2024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2024
CP000410.2	Genbank	CDS	2003473	2004201	.	-	0	ID=cds-ABJ55298.1;Parent=gene-SPD_2024;Dbxref=NCBI_GP:ABJ55298.1;Name=ABJ55298.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2196%3B equivalent gene in S.pneumoniae R6 %3D spr2002%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_2024;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ55298.1;transl_table=11
CP000410.2	Genbank	gene	2004201	2005208	.	-	.	ID=gene-SPD_2025;Name=SPD_2025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2025
CP000410.2	Genbank	CDS	2004201	2005208	.	-	0	ID=cds-ABJ54485.1;Parent=gene-SPD_2025;Dbxref=NCBI_GP:ABJ54485.1;Name=ABJ54485.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2197%3B equivalent gene in S.pneumoniae R6 %3D spr2003;gbkey=CDS;locus_tag=SPD_2025;product=ABC transporter%2C substrate-binding protein%2C putative;protein_id=ABJ54485.1;transl_table=11
CP000410.2	Genbank	gene	2005246	2005962	.	-	.	ID=gene-SPD_2026;Name=SPD_2026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2026
CP000410.2	Genbank	CDS	2005246	2005962	.	-	0	ID=cds-ABJ54212.1;Parent=gene-SPD_2026;Dbxref=NCBI_GP:ABJ54212.1;Name=ABJ54212.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2198%3B equivalent gene in S.pneumoniae R6 %3D spr2004%3B identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=SPD_2026;product=ABC transporter%2C permease protein;protein_id=ABJ54212.1;transl_table=11
CP000410.2	Genbank	gene	2005967	2006257	.	-	.	ID=gene-SPD_2027;Name=SPD_2027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2027
CP000410.2	Genbank	CDS	2005967	2006257	.	-	0	ID=cds-ABJ55167.1;Parent=gene-SPD_2027;Dbxref=NCBI_GP:ABJ55167.1;Name=ABJ55167.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2199%3B equivalent gene in S.pneumoniae R6 %3D spr2005;gbkey=CDS;locus_tag=SPD_2027;product=hypothetical protein;protein_id=ABJ55167.1;transl_table=11
CP000410.2	Genbank	gene	2006513	2007859	.	-	.	ID=gene-SPD_2028;Name=cbpD;gbkey=Gene;gene=cbpD;gene_biotype=protein_coding;locus_tag=SPD_2028
CP000410.2	Genbank	CDS	2006513	2007859	.	-	0	ID=cds-ABJ54960.1;Parent=gene-SPD_2028;Dbxref=NCBI_GP:ABJ54960.1;Name=ABJ54960.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2201%3B equivalent gene in S.pneumoniae R6 %3D spr2006%3B identified by match to protein family HMM PF01473%3B match to protein family HMM PF05257;gbkey=CDS;gene=cbpD;locus_tag=SPD_2028;product=choline binding protein D;protein_id=ABJ54960.1;transl_table=11
CP000410.2	Genbank	gene	2007948	2008214	.	-	.	ID=gene-SPD_2029;Name=SPD_2029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2029
CP000410.2	Genbank	CDS	2007948	2008214	.	-	0	ID=cds-ABJ53876.1;Parent=gene-SPD_2029;Dbxref=NCBI_GP:ABJ53876.1;Name=ABJ53876.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2202%3B equivalent gene in S.pneumoniae R6 %3D spr2007%3B identified by match to protein family HMM PF06257;gbkey=CDS;locus_tag=SPD_2029;product=hypothetical protein;protein_id=ABJ53876.1;transl_table=11
CP000410.2	Genbank	gene	2008216	2009568	.	-	.	ID=gene-SPD_2030;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=SPD_2030
CP000410.2	Genbank	CDS	2008216	2009568	.	-	0	ID=cds-ABJ54728.1;Parent=gene-SPD_2030;Dbxref=NCBI_GP:ABJ54728.1;Name=ABJ54728.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2203%3B equivalent gene in S.pneumoniae R6 %3D spr2008%3B identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665;gbkey=CDS;gene=dnaB;locus_tag=SPD_2030;product=replicative DNA helicase;protein_id=ABJ54728.1;transl_table=11
CP000410.2	Genbank	gene	2009612	2010064	.	-	.	ID=gene-SPD_2031;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SPD_2031
CP000410.2	Genbank	CDS	2009612	2010064	.	-	0	ID=cds-ABJ53631.1;Parent=gene-SPD_2031;Dbxref=NCBI_GP:ABJ53631.1;Name=ABJ53631.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2204%3B equivalent gene in S.pneumoniae R6 %3D spr2009%3B identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158;gbkey=CDS;gene=rplI;locus_tag=SPD_2031;product=ribosomal protein L9;protein_id=ABJ53631.1;transl_table=11
CP000410.2	Genbank	gene	2010061	2012034	.	-	.	ID=gene-SPD_2032;Name=SPD_2032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2032
CP000410.2	Genbank	CDS	2010061	2012034	.	-	0	ID=cds-ABJ55207.1;Parent=gene-SPD_2032;Dbxref=NCBI_GP:ABJ55207.1;Name=ABJ55207.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2205%3B equivalent gene in S.pneumoniae R6 %3D spr2010%3B identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=SPD_2032;product=DHH subfamily 1 protein;protein_id=ABJ55207.1;transl_table=11
CP000410.2	Genbank	gene	2012170	2012718	.	-	.	ID=gene-SPD_2033;Name=yfiA;gbkey=Gene;gene=yfiA;gene_biotype=protein_coding;locus_tag=SPD_2033
CP000410.2	Genbank	CDS	2012170	2012718	.	-	0	ID=cds-ABJ55214.1;Parent=gene-SPD_2033;Dbxref=NCBI_GP:ABJ55214.1;Name=ABJ55214.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2206%3B equivalent gene in S.pneumoniae R6 %3D spr2011%3B identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741;gbkey=CDS;gene=yfiA;locus_tag=SPD_2033;product=ribosomal subunit interface protein;protein_id=ABJ55214.1;transl_table=11
CP000410.2	Genbank	gene	2012798	2013460	.	-	.	ID=gene-SPD_2034;Name=SPD_2034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2034
CP000410.2	Genbank	CDS	2012798	2013460	.	-	0	ID=cds-ABJ54165.1;Parent=gene-SPD_2034;Dbxref=NCBI_GP:ABJ54165.1;Name=ABJ54165.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2207%3B equivalent gene in S.pneumoniae R6 %3D spr2012;gbkey=CDS;locus_tag=SPD_2034;product=competence protein ComF%2C putative;protein_id=ABJ54165.1;transl_table=11
CP000410.2	Genbank	gene	2013457	2014755	.	-	.	ID=gene-SPD_2035;Name=SPD_2035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2035
CP000410.2	Genbank	CDS	2013457	2014755	.	-	0	ID=cds-ABJ55033.1;Parent=gene-SPD_2035;Dbxref=NCBI_GP:ABJ55033.1;Name=ABJ55033.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2208%3B equivalent gene in S.pneumoniae R6 %3D spr2013%3B identified by match to protein family HMM PF00271%3B match to protein family HMM PF04851;gbkey=CDS;locus_tag=SPD_2035;product=helicase%2C putative;protein_id=ABJ55033.1;transl_table=11
CP000410.2	Genbank	gene	2014811	2015446	.	+	.	ID=gene-SPD_2036;Name=SPD_2036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2036
CP000410.2	Genbank	CDS	2014811	2015446	.	+	0	ID=cds-ABJ53735.1;Parent=gene-SPD_2036;Dbxref=NCBI_GP:ABJ53735.1;Name=ABJ53735.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2209%3B equivalent gene in S.pneumoniae R6 %3D spr2014%3B identified by match to protein family HMM PF01205%3B match to protein family HMM TIGR00257;gbkey=CDS;locus_tag=SPD_2036;product=conserved hypothetical protein TIGR00257;protein_id=ABJ53735.1;transl_table=11
CP000410.2	Genbank	gene	2015731	2016651	.	+	.	ID=gene-SPD_2037;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=SPD_2037
CP000410.2	Genbank	CDS	2015731	2016651	.	+	0	ID=cds-ABJ54685.1;Parent=gene-SPD_2037;Dbxref=NCBI_GP:ABJ54685.1;Name=ABJ54685.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2210%3B equivalent gene in S.pneumoniae R6 %3D spr2015%3B identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR01136%3B match to protein family HMM TIGR01139;gbkey=CDS;gene=cysK;locus_tag=SPD_2037;product=cysteine synthase A;protein_id=ABJ54685.1;transl_table=11
CP000410.2	Genbank	gene	2016848	2017117	.	-	.	ID=gene-SPD_2038;Name=SPD_2038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2038
CP000410.2	Genbank	CDS	2016848	2017117	.	-	0	ID=cds-ABJ53928.1;Parent=gene-SPD_2038;Dbxref=NCBI_GP:ABJ53928.1;Name=ABJ53928.1;Note=equivalent gene in S.pneumoniae R6 %3D spr2016;gbkey=CDS;locus_tag=SPD_2038;product=hypothetical protein;protein_id=ABJ53928.1;transl_table=11
CP000410.2	Genbank	pseudogene	2017371	2017511	.	+	.	ID=gene-SPD_2039;Name=SPD_2039;Note=equivalent gene in S.pneumoniae TIGR4 SP2212%3B transposase family protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_2039;pseudo=true
CP000410.2	Genbank	pseudogene	2017702	2017989	.	-	.	ID=gene-SPD_2040;Name=SPD_2040;Note=equivalent gene in S.pneumoniae R6 %3D spr2018%3B IS66 family element%2C Orf2%2C interruption%3B identified by match to protein family HMM PF05717;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_2040;pseudo=true
CP000410.2	Genbank	gene	2018235	2019275	.	-	.	ID=gene-SPD_2041;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SPD_2041
CP000410.2	Genbank	CDS	2018235	2019275	.	-	0	ID=cds-ABJ54372.1;Parent=gene-SPD_2041;Dbxref=NCBI_GP:ABJ54372.1;Name=ABJ54372.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2214%3B equivalent gene in S.pneumoniae R6 %3D spr2019%3B identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116;gbkey=CDS;gene=tsf;locus_tag=SPD_2041;product=translation elongation factor Ts;protein_id=ABJ54372.1;transl_table=11
CP000410.2	Genbank	gene	2019341	2020120	.	-	.	ID=gene-SPD_2042;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=SPD_2042
CP000410.2	Genbank	CDS	2019341	2020120	.	-	0	ID=cds-ABJ55424.1;Parent=gene-SPD_2042;Dbxref=NCBI_GP:ABJ55424.1;Name=ABJ55424.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2215%3B equivalent gene in S.pneumoniae R6 %3D spr2020%3B identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011;gbkey=CDS;gene=rpsB;locus_tag=SPD_2042;product=ribosomal protein S2;protein_id=ABJ55424.1;transl_table=11
CP000410.2	Genbank	gene	2020344	2021522	.	-	.	ID=gene-SPD_2043;Name=SPD_2043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2043
CP000410.2	Genbank	CDS	2020344	2021522	.	-	0	ID=cds-ABJ54886.1;Parent=gene-SPD_2043;Dbxref=NCBI_GP:ABJ54886.1;Name=ABJ54886.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2216%3B equivalent gene in S.pneumoniae R6 %3D spr2021%3B identified by match to protein family HMM PF05257;gbkey=CDS;locus_tag=SPD_2043;product=secreted 45 kDa protein precursor;protein_id=ABJ54886.1;transl_table=11
CP000410.2	Genbank	gene	2021616	2022110	.	-	.	ID=gene-SPD_2044;Name=SPD_2044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2044
CP000410.2	Genbank	CDS	2021616	2022110	.	-	0	ID=cds-ABJ53789.1;Parent=gene-SPD_2044;Dbxref=NCBI_GP:ABJ53789.1;Name=ABJ53789.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2217%3B equivalent gene in S.pneumoniae R6 %3D spr2022%3B identified by match to protein family HMM PF04093;gbkey=CDS;locus_tag=SPD_2044;product=rod shpae-determining protein MreD%2C putative;protein_id=ABJ53789.1;transl_table=11
CP000410.2	Genbank	gene	2022110	2022928	.	-	.	ID=gene-SPD_2045;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=SPD_2045
CP000410.2	Genbank	CDS	2022110	2022928	.	-	0	ID=cds-ABJ54670.1;Parent=gene-SPD_2045;Dbxref=NCBI_GP:ABJ54670.1;Name=ABJ54670.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2218%3B equivalent gene in S.pneumoniae R6 %3D spr2023%3B identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219;gbkey=CDS;gene=mreC;locus_tag=SPD_2045;product=rod shape-determining protein MreC;protein_id=ABJ54670.1;transl_table=11
CP000410.2	Genbank	gene	2022987	2023781	.	-	.	ID=gene-SPD_2046;Name=SPD_2046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2046
CP000410.2	Genbank	CDS	2022987	2023781	.	-	0	ID=cds-ABJ54558.1;Parent=gene-SPD_2046;Dbxref=NCBI_GP:ABJ54558.1;Name=ABJ54558.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2219%3B equivalent gene in S.pneumoniae R6 %3D spr2024%3B identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=SPD_2046;product=cobalt ABC transporter%2C permease protein;protein_id=ABJ54558.1;transl_table=11
CP000410.2	Genbank	gene	2023774	2024613	.	-	.	ID=gene-SPD_2047;Name=cbiO1;gbkey=Gene;gene=cbiO1;gene_biotype=protein_coding;locus_tag=SPD_2047
CP000410.2	Genbank	CDS	2023774	2024613	.	-	0	ID=cds-ABJ55378.1;Parent=gene-SPD_2047;Dbxref=NCBI_GP:ABJ55378.1;Name=ABJ55378.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2220%3B equivalent gene in S.pneumoniae R6 %3D spr2025%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=cbiO1;locus_tag=SPD_2047;product=cobalt ABC transporter%2C ATP-binding protein CbiO1;protein_id=ABJ55378.1;transl_table=11
CP000410.2	Genbank	gene	2024598	2025425	.	-	.	ID=gene-SPD_2048;Name=cbiO2;gbkey=Gene;gene=cbiO2;gene_biotype=protein_coding;locus_tag=SPD_2048
CP000410.2	Genbank	CDS	2024598	2025425	.	-	0	ID=cds-ABJ54283.1;Parent=gene-SPD_2048;Dbxref=NCBI_GP:ABJ54283.1;Name=ABJ54283.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2221%3B equivalent gene in S.pneumoniae R6 %3D spr2026%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=cbiO2;locus_tag=SPD_2048;product=cobalt ABC transporter%2C ATP-binding protein CbiO2;protein_id=ABJ54283.1;transl_table=11
CP000410.2	Genbank	gene	2025422	2025967	.	-	.	ID=gene-SPD_2049;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=SPD_2049
CP000410.2	Genbank	CDS	2025422	2025967	.	-	0	ID=cds-ABJ55172.1;Parent=gene-SPD_2049;Dbxref=NCBI_GP:ABJ55172.1;Name=ABJ55172.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2222%3B equivalent gene in S.pneumoniae R6 %3D spr2027%3B identified by match to protein family HMM PF01066%3B match to protein family HMM TIGR00560;gbkey=CDS;gene=pgsA;locus_tag=SPD_2049;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=ABJ55172.1;transl_table=11
CP000410.2	Genbank	gene	2025978	2026799	.	-	.	ID=gene-SPD_2050;Name=SPD_2050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2050
CP000410.2	Genbank	CDS	2025978	2026799	.	-	0	ID=cds-ABJ54044.1;Parent=gene-SPD_2050;Dbxref=NCBI_GP:ABJ54044.1;Name=ABJ54044.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2223%3B equivalent gene in S.pneumoniae R6 %3D spr2028;gbkey=CDS;locus_tag=SPD_2050;product=hypothetical protein;protein_id=ABJ54044.1;transl_table=11
CP000410.2	Genbank	gene	2026841	2028124	.	-	.	ID=gene-SPD_2051;Name=SPD_2051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2051
CP000410.2	Genbank	CDS	2026841	2028124	.	-	0	ID=cds-ABJ54920.1;Parent=gene-SPD_2051;Dbxref=NCBI_GP:ABJ54920.1;Name=ABJ54920.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2224%3B equivalent gene in S.pneumoniae R6 %3D spr2029%3B identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193;gbkey=CDS;locus_tag=SPD_2051;product=peptidase%2C M16 family protein;protein_id=ABJ54920.1;transl_table=11
CP000410.2	Genbank	gene	2028121	2029371	.	-	.	ID=gene-SPD_2052;Name=SPD_2052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2052
CP000410.2	Genbank	CDS	2028121	2029371	.	-	0	ID=cds-ABJ53744.1;Parent=gene-SPD_2052;Dbxref=NCBI_GP:ABJ53744.1;Name=ABJ53744.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2225%3B equivalent gene in S.pneumoniae R6 %3D spr2030%3B identified by match to protein family HMM PF05193;gbkey=CDS;locus_tag=SPD_2052;product=hypothetical protein;protein_id=ABJ53744.1;transl_table=11
CP000410.2	Genbank	gene	2029530	2029898	.	+	.	ID=gene-SPD_2053;Name=SPD_2053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2053
CP000410.2	Genbank	CDS	2029530	2029898	.	+	0	ID=cds-ABJ53674.1;Parent=gene-SPD_2053;Dbxref=NCBI_GP:ABJ53674.1;Name=ABJ53674.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2226%3B equivalent gene in S.pneumoniae R6 %3D spr2031;gbkey=CDS;locus_tag=SPD_2053;product=hypothetical protein;protein_id=ABJ53674.1;transl_table=11
CP000410.2	Genbank	gene	2029901	2030998	.	+	.	ID=gene-SPD_2054;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SPD_2054
CP000410.2	Genbank	CDS	2029901	2030998	.	+	0	ID=cds-ABJ54836.1;Parent=gene-SPD_2054;Dbxref=NCBI_GP:ABJ54836.1;Name=ABJ54836.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2227%3B equivalent gene in S.pneumoniae R6 %3D spr2032%3B identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00611;gbkey=CDS;gene=recF;locus_tag=SPD_2054;product=recF protein;protein_id=ABJ54836.1;transl_table=11
CP000410.2	Genbank	gene	2031049	2032527	.	-	.	ID=gene-SPD_2055;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=SPD_2055
CP000410.2	Genbank	CDS	2031049	2032527	.	-	0	ID=cds-ABJ54261.1;Parent=gene-SPD_2055;Dbxref=NCBI_GP:ABJ54261.1;Name=ABJ54261.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2228%3B equivalent gene in S.pneumoniae R6 %3D spr2033%3B identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302;gbkey=CDS;gene=guaB;locus_tag=SPD_2055;product=inosine-5'-monophosphate dehydrogenase;protein_id=ABJ54261.1;transl_table=11
CP000410.2	Genbank	gene	2032679	2033704	.	-	.	ID=gene-SPD_2056;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=SPD_2056
CP000410.2	Genbank	CDS	2032679	2033704	.	-	0	ID=cds-ABJ55106.1;Parent=gene-SPD_2056;Dbxref=NCBI_GP:ABJ55106.1;Name=ABJ55106.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2229%3B equivalent gene in S.pneumoniae R6 %3D spr2034%3B identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233;gbkey=CDS;gene=trpS;locus_tag=SPD_2056;product=tryptophanyl-tRNA synthetase;protein_id=ABJ55106.1;transl_table=11
CP000410.2	Genbank	gene	2033910	2035532	.	+	.	ID=gene-SPD_2057;Name=SPD_2057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2057
CP000410.2	Genbank	CDS	2033910	2035532	.	+	0	ID=cds-ABJ54154.1;Parent=gene-SPD_2057;Dbxref=NCBI_GP:ABJ54154.1;Name=ABJ54154.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2230%3B equivalent gene in S.pneumoniae R6 %3D spr2035%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=SPD_2057;product=ABC transporter%2C ATP-binding protein;protein_id=ABJ54154.1;transl_table=11
CP000410.2	Genbank	gene	2035594	2038146	.	+	.	ID=gene-SPD_2058;Name=SPD_2058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2058
CP000410.2	Genbank	CDS	2035594	2038146	.	+	0	ID=cds-ABJ55109.1;Parent=gene-SPD_2058;Dbxref=NCBI_GP:ABJ55109.1;Name=ABJ55109.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2231%3B equivalent gene in S.pneumoniae R6 %3D spr2036;gbkey=CDS;locus_tag=SPD_2058;product=ABC transporter%2C permease protein%2C putative;protein_id=ABJ55109.1;transl_table=11
CP000410.2	Genbank	pseudogene	2038589	2039779	.	-	.	ID=gene-SPD_2059;Name=SPD_2059;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2233%3B equivalent gene in S.pneumoniae R6 %3D spr2039. The R6 version is similarly mutated relative to orthologs%3B conserved hypothetical protein%2C degenerate;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SPD_2059;pseudo=true
CP000410.2	Genbank	gene	2039958	2040500	.	+	.	ID=gene-SPD_2060;Name=SPD_2060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2060
CP000410.2	Genbank	CDS	2039958	2040500	.	+	0	ID=cds-ABJ54888.1;Parent=gene-SPD_2060;Dbxref=NCBI_GP:ABJ54888.1;Name=ABJ54888.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2234%3B equivalent gene in S.pneumoniae R6 %3D spr2040%3B identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=SPD_2060;product=transcriptional regulator%2C TetR family protein;protein_id=ABJ54888.1;transl_table=11
CP000410.2	Genbank	gene	2040541	2040614	.	-	.	ID=gene-SPD_2061;Name=SPD_2061;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_2061
CP000410.2	Genbank	tRNA	2040541	2040614	.	-	.	ID=rna-SPD_2061;Parent=gene-SPD_2061;gbkey=tRNA;locus_tag=SPD_2061;product=tRNA-Asn
CP000410.2	Genbank	exon	2040541	2040614	.	-	.	ID=exon-SPD_2061-1;Parent=rna-SPD_2061;gbkey=tRNA;locus_tag=SPD_2061;product=tRNA-Asn
CP000410.2	Genbank	gene	2040620	2040691	.	-	.	ID=gene-SPD_2062;Name=SPD_2062;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_2062
CP000410.2	Genbank	tRNA	2040620	2040691	.	-	.	ID=rna-SPD_2062;Parent=gene-SPD_2062;gbkey=tRNA;locus_tag=SPD_2062;product=tRNA-Glu
CP000410.2	Genbank	exon	2040620	2040691	.	-	.	ID=exon-SPD_2062-1;Parent=rna-SPD_2062;gbkey=tRNA;locus_tag=SPD_2062;product=tRNA-Glu
CP000410.2	Genbank	gene	2040743	2041495	.	-	.	ID=gene-SPD_2063;Name=comE;gbkey=Gene;gene=comE;gene_biotype=protein_coding;locus_tag=SPD_2063
CP000410.2	Genbank	CDS	2040743	2041495	.	-	0	ID=cds-ABJ53793.1;Parent=gene-SPD_2063;Dbxref=NCBI_GP:ABJ53793.1;Name=ABJ53793.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2235%3B equivalent gene in S.pneumoniae R6 %3D spr2041%3B identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;gene=comE;locus_tag=SPD_2063;product=response regulator;protein_id=ABJ53793.1;transl_table=11
CP000410.2	Genbank	gene	2041492	2042817	.	-	.	ID=gene-SPD_2064;Name=comD;gbkey=Gene;gene=comD;gene_biotype=protein_coding;locus_tag=SPD_2064
CP000410.2	Genbank	CDS	2041492	2042817	.	-	0	ID=cds-ABJ53801.1;Parent=gene-SPD_2064;Dbxref=NCBI_GP:ABJ53801.1;Name=ABJ53801.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2236%3B equivalent gene in S.pneumoniae R6 %3D spr2042%3B identified by match to protein family HMM PF02518;gbkey=CDS;gene=comD;locus_tag=SPD_2064;product=putative sensor histidine kinase ComD;protein_id=ABJ53801.1;transl_table=11
CP000410.2	Genbank	gene	2042838	2042963	.	-	.	ID=gene-SPD_2065;Name=comC1;gbkey=Gene;gene=comC1;gene_biotype=protein_coding;locus_tag=SPD_2065
CP000410.2	Genbank	CDS	2042838	2042963	.	-	0	ID=cds-ABJ55363.1;Parent=gene-SPD_2065;Dbxref=NCBI_GP:ABJ55363.1;Name=ABJ55363.1;Note=equivalent gene in S.pneumoniae R6 %3D spr2043%3B identified by match to protein family HMM PF03047;gbkey=CDS;gene=comC1;locus_tag=SPD_2065;product=competence-stimulating peptide type 1;protein_id=ABJ55363.1;transl_table=11
CP000410.2	Genbank	gene	2043128	2043201	.	-	.	ID=gene-SPD_2066;Name=SPD_2066;gbkey=Gene;gene_biotype=tRNA;locus_tag=SPD_2066
CP000410.2	Genbank	tRNA	2043128	2043201	.	-	.	ID=rna-SPD_2066;Parent=gene-SPD_2066;gbkey=tRNA;locus_tag=SPD_2066;product=tRNA-Arg
CP000410.2	Genbank	exon	2043128	2043201	.	-	.	ID=exon-SPD_2066-1;Parent=rna-SPD_2066;gbkey=tRNA;locus_tag=SPD_2066;product=tRNA-Arg
CP000410.2	Genbank	gene	2043245	2043724	.	-	.	ID=gene-SPD_2067;Name=SPD_2067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2067
CP000410.2	Genbank	CDS	2043245	2043724	.	-	0	ID=cds-ABJ53856.1;Parent=gene-SPD_2067;Dbxref=NCBI_GP:ABJ53856.1;Name=ABJ53856.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2238%3B equivalent gene in S.pneumoniae R6 %3D spr2044%3B identified by match to protein family HMM PF02590%3B match to protein family HMM TIGR00246;gbkey=CDS;locus_tag=SPD_2067;product=hypothetical protein;protein_id=ABJ53856.1;transl_table=11
CP000410.2	Genbank	gene	2043907	2045088	.	+	.	ID=gene-SPD_2068;Name=SPD_2068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2068
CP000410.2	Genbank	CDS	2043907	2045088	.	+	0	ID=cds-ABJ54994.1;Parent=gene-SPD_2068;Dbxref=NCBI_GP:ABJ54994.1;Name=ABJ54994.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2239%3B equivalent gene in S.pneumoniae R6 %3D spr2045%3B identified by match to protein family HMM PF00089;gbkey=CDS;locus_tag=SPD_2068;product=serine protease;protein_id=ABJ54994.1;transl_table=11
CP000410.2	Genbank	gene	2045146	2045904	.	+	.	ID=gene-SPD_2069;Name=SPD_2069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SPD_2069
CP000410.2	Genbank	CDS	2045146	2045904	.	+	0	ID=cds-ABJ54043.1;Parent=gene-SPD_2069;Dbxref=NCBI_GP:ABJ54043.1;Name=ABJ54043.1;Note=equivalent gene in S.pneumoniae TIGR4 %3D SP2240%3B equivalent gene in S.pneumoniae R6 %3D spr2046%3B identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180;gbkey=CDS;locus_tag=SPD_2069;product=SpoJ protein;protein_id=ABJ54043.1;transl_table=11
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