##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM21449v1
#!genome-build-accession NCBI_Assembly:GCA_000214495.2
##sequence-region AFIJ01000045.1 1 114466
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000045.1	Genbank	region	1	114466	.	+	.	ID=AFIJ01000045.1:1..114466;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000045.1	Genbank	gene	717	1427	.	-	.	ID=gene-HMPREF1039_0559;Name=HMPREF1039_0559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0559
AFIJ01000045.1	Genbank	CDS	717	1427	.	-	0	ID=cds-EGL35115.1;Parent=gene-HMPREF1039_0559;Dbxref=NCBI_GP:EGL35115.1;Name=EGL35115.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0559;product=hypothetical protein;protein_id=EGL35115.1;transl_table=11
AFIJ01000045.1	Genbank	gene	1518	1841	.	-	.	ID=gene-HMPREF1039_0560;Name=HMPREF1039_0560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0560
AFIJ01000045.1	Genbank	CDS	1518	1841	.	-	0	ID=cds-EGL35098.1;Parent=gene-HMPREF1039_0560;Dbxref=NCBI_GP:EGL35098.1;Name=EGL35098.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF1039_0560;product=transcriptional regulator%2C TetR family;protein_id=EGL35098.1;transl_table=11
AFIJ01000045.1	Genbank	gene	2539	3870	.	+	.	ID=gene-HMPREF1039_0561;Name=HMPREF1039_0561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0561
AFIJ01000045.1	Genbank	CDS	2539	3870	.	+	0	ID=cds-EGL35081.1;Parent=gene-HMPREF1039_0561;Dbxref=NCBI_GP:EGL35081.1;Name=EGL35081.1;Note=identified by match to protein family HMM PF03432;gbkey=CDS;locus_tag=HMPREF1039_0561;product=relaxase/mobilization nuclease domain protein;protein_id=EGL35081.1;transl_table=11
AFIJ01000045.1	Genbank	gene	3939	4598	.	-	.	ID=gene-HMPREF1039_0562;Name=HMPREF1039_0562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0562
AFIJ01000045.1	Genbank	CDS	3939	4598	.	-	0	ID=cds-EGL35074.1;Parent=gene-HMPREF1039_0562;Dbxref=NCBI_GP:EGL35074.1;Name=EGL35074.1;Note=identified by match to protein family HMM PF00436;gbkey=CDS;locus_tag=HMPREF1039_0562;product=single-strand binding family protein;protein_id=EGL35074.1;transl_table=11
AFIJ01000045.1	Genbank	gene	4639	8559	.	-	.	ID=gene-HMPREF1039_0563;Name=HMPREF1039_0563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0563
AFIJ01000045.1	Genbank	CDS	4639	8559	.	-	0	ID=cds-EGL35136.1;Parent=gene-HMPREF1039_0563;Dbxref=NCBI_GP:EGL35136.1;Name=EGL35136.1;Note=identified by match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF1039_0563;product=helicase C-terminal domain protein;protein_id=EGL35136.1;transl_table=11
AFIJ01000045.1	Genbank	gene	9062	13357	.	-	.	ID=gene-HMPREF1039_0564;Name=HMPREF1039_0564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0564
AFIJ01000045.1	Genbank	CDS	9062	13357	.	-	0	ID=cds-EGL35079.1;Parent=gene-HMPREF1039_0564;Dbxref=NCBI_GP:EGL35079.1;Name=EGL35079.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0564;product=hypothetical protein;protein_id=EGL35079.1;transl_table=11
AFIJ01000045.1	Genbank	gene	13439	14470	.	-	.	ID=gene-HMPREF1039_0565;Name=HMPREF1039_0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0565
AFIJ01000045.1	Genbank	CDS	13439	14470	.	-	0	ID=cds-EGL35099.1;Parent=gene-HMPREF1039_0565;Dbxref=NCBI_GP:EGL35099.1;Name=EGL35099.1;Note=identified by match to protein family HMM PF06250;gbkey=CDS;locus_tag=HMPREF1039_0565;product=hypothetical protein;protein_id=EGL35099.1;transl_table=11
AFIJ01000045.1	Genbank	gene	14499	14678	.	-	.	ID=gene-HMPREF1039_0566;Name=HMPREF1039_0566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0566
AFIJ01000045.1	Genbank	CDS	14499	14678	.	-	0	ID=cds-EGL35083.1;Parent=gene-HMPREF1039_0566;Dbxref=NCBI_GP:EGL35083.1;Name=EGL35083.1;Note=identified by match to protein family HMM PF04014%3B match to protein family HMM TIGR01439;gbkey=CDS;locus_tag=HMPREF1039_0566;product=transcriptional regulator%2C AbrB family;protein_id=EGL35083.1;transl_table=11
AFIJ01000045.1	Genbank	gene	14759	16471	.	-	.	ID=gene-HMPREF1039_0567;Name=HMPREF1039_0567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0567
AFIJ01000045.1	Genbank	CDS	14759	16471	.	-	0	ID=cds-EGL35127.1;Parent=gene-HMPREF1039_0567;Dbxref=NCBI_GP:EGL35127.1;Name=EGL35127.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01751;gbkey=CDS;locus_tag=HMPREF1039_0567;product=DNA topoisomerase;protein_id=EGL35127.1;transl_table=11
AFIJ01000045.1	Genbank	gene	16566	16856	.	-	.	ID=gene-HMPREF1039_0568;Name=HMPREF1039_0568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0568
AFIJ01000045.1	Genbank	CDS	16566	16856	.	-	0	ID=cds-EGL35160.1;Parent=gene-HMPREF1039_0568;Dbxref=NCBI_GP:EGL35160.1;Name=EGL35160.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0568;product=hypothetical protein;protein_id=EGL35160.1;transl_table=11
AFIJ01000045.1	Genbank	gene	16895	17953	.	-	.	ID=gene-HMPREF1039_0569;Name=HMPREF1039_0569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0569
AFIJ01000045.1	Genbank	CDS	16895	17953	.	-	0	ID=cds-EGL35104.1;Parent=gene-HMPREF1039_0569;Dbxref=NCBI_GP:EGL35104.1;Name=EGL35104.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0569;product=hypothetical protein;protein_id=EGL35104.1;transl_table=11
AFIJ01000045.1	Genbank	gene	18084	18323	.	-	.	ID=gene-HMPREF1039_0570;Name=HMPREF1039_0570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0570
AFIJ01000045.1	Genbank	CDS	18084	18323	.	-	0	ID=cds-EGL35107.1;Parent=gene-HMPREF1039_0570;Dbxref=NCBI_GP:EGL35107.1;Name=EGL35107.1;gbkey=CDS;locus_tag=HMPREF1039_0570;product=hypothetical protein;protein_id=EGL35107.1;transl_table=11
AFIJ01000045.1	Genbank	gene	18335	20467	.	-	.	ID=gene-HMPREF1039_0571;Name=HMPREF1039_0571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0571
AFIJ01000045.1	Genbank	CDS	18335	20467	.	-	0	ID=cds-EGL35137.1;Parent=gene-HMPREF1039_0571;Dbxref=NCBI_GP:EGL35137.1;Name=EGL35137.1;gbkey=CDS;locus_tag=HMPREF1039_0571;product=hypothetical protein;protein_id=EGL35137.1;transl_table=11
AFIJ01000045.1	Genbank	gene	20471	22900	.	-	.	ID=gene-HMPREF1039_0572;Name=HMPREF1039_0572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0572
AFIJ01000045.1	Genbank	CDS	20471	22900	.	-	0	ID=cds-EGL35145.1;Parent=gene-HMPREF1039_0572;Dbxref=NCBI_GP:EGL35145.1;Name=EGL35145.1;gbkey=CDS;locus_tag=HMPREF1039_0572;product=hypothetical protein;protein_id=EGL35145.1;transl_table=11
AFIJ01000045.1	Genbank	gene	23205	23411	.	-	.	ID=gene-HMPREF1039_0573;Name=HMPREF1039_0573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0573
AFIJ01000045.1	Genbank	CDS	23205	23411	.	-	0	ID=cds-EGL35157.1;Parent=gene-HMPREF1039_0573;Dbxref=NCBI_GP:EGL35157.1;Name=EGL35157.1;gbkey=CDS;locus_tag=HMPREF1039_0573;product=hypothetical protein;protein_id=EGL35157.1;transl_table=11
AFIJ01000045.1	Genbank	gene	23486	24349	.	-	.	ID=gene-HMPREF1039_0574;Name=HMPREF1039_0574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0574
AFIJ01000045.1	Genbank	CDS	23486	24349	.	-	0	ID=cds-EGL35170.1;Parent=gene-HMPREF1039_0574;Dbxref=NCBI_GP:EGL35170.1;Name=EGL35170.1;gbkey=CDS;locus_tag=HMPREF1039_0574;product=hypothetical protein;protein_id=EGL35170.1;transl_table=11
AFIJ01000045.1	Genbank	gene	24369	24584	.	-	.	ID=gene-HMPREF1039_0575;Name=HMPREF1039_0575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0575
AFIJ01000045.1	Genbank	CDS	24369	24584	.	-	0	ID=cds-EGL35124.1;Parent=gene-HMPREF1039_0575;Dbxref=NCBI_GP:EGL35124.1;Name=EGL35124.1;gbkey=CDS;locus_tag=HMPREF1039_0575;product=hypothetical protein;protein_id=EGL35124.1;transl_table=11
AFIJ01000045.1	Genbank	gene	25066	26850	.	-	.	ID=gene-HMPREF1039_0576;Name=HMPREF1039_0576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0576
AFIJ01000045.1	Genbank	CDS	25066	26850	.	-	0	ID=cds-EGL35112.1;Parent=gene-HMPREF1039_0576;Dbxref=NCBI_GP:EGL35112.1;Name=EGL35112.1;Note=identified by match to protein family HMM PF02534;gbkey=CDS;locus_tag=HMPREF1039_0576;product=TraG/TraD family protein;protein_id=EGL35112.1;transl_table=11
AFIJ01000045.1	Genbank	gene	26847	27332	.	-	.	ID=gene-HMPREF1039_0577;Name=HMPREF1039_0577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0577
AFIJ01000045.1	Genbank	CDS	26847	27332	.	-	0	ID=cds-EGL35100.1;Parent=gene-HMPREF1039_0577;Dbxref=NCBI_GP:EGL35100.1;Name=EGL35100.1;gbkey=CDS;locus_tag=HMPREF1039_0577;product=hypothetical protein;protein_id=EGL35100.1;transl_table=11
AFIJ01000045.1	Genbank	gene	27329	28180	.	-	.	ID=gene-HMPREF1039_0578;Name=HMPREF1039_0578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0578
AFIJ01000045.1	Genbank	CDS	27329	28180	.	-	0	ID=cds-EGL35102.1;Parent=gene-HMPREF1039_0578;Dbxref=NCBI_GP:EGL35102.1;Name=EGL35102.1;gbkey=CDS;locus_tag=HMPREF1039_0578;product=hypothetical protein;protein_id=EGL35102.1;transl_table=11
AFIJ01000045.1	Genbank	gene	28177	28947	.	-	.	ID=gene-HMPREF1039_0579;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0579
AFIJ01000045.1	Genbank	CDS	28177	28947	.	-	0	ID=cds-EGL35075.1;Parent=gene-HMPREF1039_0579;Dbxref=NCBI_GP:EGL35075.1;Name=EGL35075.1;Note=N-terminal%3B identified by match to protein family HMM PF06970;gbkey=CDS;gene=repA;locus_tag=HMPREF1039_0579;product=replication initiator protein A domain protein;protein_id=EGL35075.1;transl_table=11
AFIJ01000045.1	Genbank	gene	29326	29484	.	-	.	ID=gene-HMPREF1039_0580;Name=HMPREF1039_0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0580
AFIJ01000045.1	Genbank	CDS	29326	29484	.	-	0	ID=cds-EGL35168.1;Parent=gene-HMPREF1039_0580;Dbxref=NCBI_GP:EGL35168.1;Name=EGL35168.1;gbkey=CDS;locus_tag=HMPREF1039_0580;product=hypothetical protein;protein_id=EGL35168.1;transl_table=11
AFIJ01000045.1	Genbank	gene	29481	30866	.	-	.	ID=gene-HMPREF1039_0581;Name=rumA;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0581
AFIJ01000045.1	Genbank	CDS	29481	30866	.	-	0	ID=cds-EGL35147.1;Parent=gene-HMPREF1039_0581;Dbxref=NCBI_GP:EGL35147.1;Name=EGL35147.1;Note=identified by match to protein family HMM PF01938%3B match to protein family HMM PF02475%3B match to protein family HMM PF05958%3B match to protein family HMM TIGR00479;gbkey=CDS;gene=rumA;locus_tag=HMPREF1039_0581;product=23S rRNA (uracil-5-)-methyltransferase RumA;protein_id=EGL35147.1;transl_table=11
AFIJ01000045.1	Genbank	gene	30903	32216	.	-	.	ID=gene-HMPREF1039_0582;Name=pdp;gbkey=Gene;gene=pdp;gene_biotype=protein_coding;locus_tag=HMPREF1039_0582
AFIJ01000045.1	Genbank	CDS	30903	32216	.	-	0	ID=cds-EGL35088.1;Parent=gene-HMPREF1039_0582;Dbxref=NCBI_GP:EGL35088.1;Name=EGL35088.1;Note=identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM PF07831%3B match to protein family HMM TIGR02644;gbkey=CDS;gene=pdp;locus_tag=HMPREF1039_0582;product=pyrimidine-nucleoside phosphorylase;protein_id=EGL35088.1;transl_table=11
AFIJ01000045.1	Genbank	gene	32228	33409	.	-	.	ID=gene-HMPREF1039_0583;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0583
AFIJ01000045.1	Genbank	CDS	32228	33409	.	-	0	ID=cds-EGL35073.1;Parent=gene-HMPREF1039_0583;Dbxref=NCBI_GP:EGL35073.1;Name=EGL35073.1;Note=identified by match to protein family HMM PF01676%3B match to protein family HMM PF08342%3B match to protein family HMM TIGR01696;gbkey=CDS;gene=deoB;locus_tag=HMPREF1039_0583;product=phosphopentomutase;protein_id=EGL35073.1;transl_table=11
AFIJ01000045.1	Genbank	gene	33429	33977	.	-	.	ID=gene-HMPREF1039_0584;Name=HMPREF1039_0584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0584
AFIJ01000045.1	Genbank	CDS	33429	33977	.	-	0	ID=cds-EGL35167.1;Parent=gene-HMPREF1039_0584;Dbxref=NCBI_GP:EGL35167.1;Name=EGL35167.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF1039_0584;product=hydrolase%2C NUDIX family;protein_id=EGL35167.1;transl_table=11
AFIJ01000045.1	Genbank	gene	34038	34484	.	-	.	ID=gene-HMPREF1039_0585;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=HMPREF1039_0585
AFIJ01000045.1	Genbank	CDS	34038	34484	.	-	0	ID=cds-EGL35149.1;Parent=gene-HMPREF1039_0585;Dbxref=NCBI_GP:EGL35149.1;Name=EGL35149.1;Note=identified by match to protein family HMM PF00692%3B match to protein family HMM TIGR00576;gbkey=CDS;gene=dut;locus_tag=HMPREF1039_0585;product=dUTP diphosphatase;protein_id=EGL35149.1;transl_table=11
AFIJ01000045.1	Genbank	gene	34491	36641	.	-	.	ID=gene-HMPREF1039_0586;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=HMPREF1039_0586
AFIJ01000045.1	Genbank	CDS	34491	36641	.	-	0	ID=cds-EGL35158.1;Parent=gene-HMPREF1039_0586;Dbxref=NCBI_GP:EGL35158.1;Name=EGL35158.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF00575%3B match to protein family HMM PF01138%3B match to protein family HMM PF03725%3B match to protein family HMM PF03726%3B match to protein family HMM TIGR03591;gbkey=CDS;gene=pnp;locus_tag=HMPREF1039_0586;product=polyribonucleotide nucleotidyltransferase;protein_id=EGL35158.1;transl_table=11
AFIJ01000045.1	Genbank	gene	36791	37057	.	-	.	ID=gene-HMPREF1039_0587;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=HMPREF1039_0587
AFIJ01000045.1	Genbank	CDS	36791	37057	.	-	0	ID=cds-EGL35162.1;Parent=gene-HMPREF1039_0587;Dbxref=NCBI_GP:EGL35162.1;Name=EGL35162.1;Note=identified by match to protein family HMM PF00312%3B match to protein family HMM TIGR00952;gbkey=CDS;gene=rpsO;locus_tag=HMPREF1039_0587;product=ribosomal protein S15;protein_id=EGL35162.1;transl_table=11
AFIJ01000045.1	Genbank	gene	37306	38073	.	-	.	ID=gene-HMPREF1039_0588;Name=HMPREF1039_0588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0588
AFIJ01000045.1	Genbank	CDS	37306	38073	.	-	0	ID=cds-EGL35134.1;Parent=gene-HMPREF1039_0588;Dbxref=NCBI_GP:EGL35134.1;Name=EGL35134.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;locus_tag=HMPREF1039_0588;product=LytTr DNA-binding domain protein;protein_id=EGL35134.1;transl_table=11
AFIJ01000045.1	Genbank	gene	38118	39746	.	-	.	ID=gene-HMPREF1039_0589;Name=HMPREF1039_0589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0589
AFIJ01000045.1	Genbank	CDS	38118	39746	.	-	0	ID=cds-EGL35114.1;Parent=gene-HMPREF1039_0589;Dbxref=NCBI_GP:EGL35114.1;Name=EGL35114.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF06580%3B match to protein family HMM PF07694;gbkey=CDS;locus_tag=HMPREF1039_0589;product=LytS/YhcK-type transmembrane receptor domain protein;protein_id=EGL35114.1;transl_table=11
AFIJ01000045.1	Genbank	gene	40022	41134	.	-	.	ID=gene-HMPREF1039_0590;Name=HMPREF1039_0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0590
AFIJ01000045.1	Genbank	CDS	40022	41134	.	-	0	ID=cds-EGL35113.1;Parent=gene-HMPREF1039_0590;Dbxref=NCBI_GP:EGL35113.1;Name=EGL35113.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF1039_0590;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EGL35113.1;transl_table=11
AFIJ01000045.1	Genbank	gene	41207	42565	.	-	.	ID=gene-HMPREF1039_0591;Name=HMPREF1039_0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0591
AFIJ01000045.1	Genbank	CDS	41207	42565	.	-	0	ID=cds-EGL35128.1;Parent=gene-HMPREF1039_0591;Dbxref=NCBI_GP:EGL35128.1;Name=EGL35128.1;Note=identified by match to protein family HMM PF00171;gbkey=CDS;locus_tag=HMPREF1039_0591;product=aldehyde dehydrogenase (NAD) family protein;protein_id=EGL35128.1;transl_table=11
AFIJ01000045.1	Genbank	gene	42857	44320	.	-	.	ID=gene-HMPREF1039_0592;Name=HMPREF1039_0592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0592
AFIJ01000045.1	Genbank	CDS	42857	44320	.	-	0	ID=cds-EGL35109.1;Parent=gene-HMPREF1039_0592;Dbxref=NCBI_GP:EGL35109.1;Name=EGL35109.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF02256%3B match to protein family HMM PF02906%3B match to protein family HMM TIGR02512;gbkey=CDS;locus_tag=HMPREF1039_0592;product=hydrogenase%2C Fe-only;protein_id=EGL35109.1;transl_table=11
AFIJ01000045.1	Genbank	gene	44513	46384	.	-	.	ID=gene-HMPREF1039_0593;Name=HMPREF1039_0593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0593
AFIJ01000045.1	Genbank	CDS	44513	46384	.	-	0	ID=cds-EGL35094.1;Parent=gene-HMPREF1039_0593;Dbxref=NCBI_GP:EGL35094.1;Name=EGL35094.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0593;product=ABC transporter%2C ATP-binding protein;protein_id=EGL35094.1;transl_table=11
AFIJ01000045.1	Genbank	gene	46772	47770	.	-	.	ID=gene-HMPREF1039_0594;Name=HMPREF1039_0594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0594
AFIJ01000045.1	Genbank	CDS	46772	47770	.	-	0	ID=cds-EGL35130.1;Parent=gene-HMPREF1039_0594;Dbxref=NCBI_GP:EGL35130.1;Name=EGL35130.1;gbkey=CDS;locus_tag=HMPREF1039_0594;product=hypothetical protein;protein_id=EGL35130.1;transl_table=11
AFIJ01000045.1	Genbank	gene	47888	49225	.	-	.	ID=gene-HMPREF1039_0595;Name=HMPREF1039_0595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0595
AFIJ01000045.1	Genbank	CDS	47888	49225	.	-	0	ID=cds-EGL35140.1;Parent=gene-HMPREF1039_0595;Dbxref=NCBI_GP:EGL35140.1;Name=EGL35140.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF1039_0595;product=MATE efflux family protein;protein_id=EGL35140.1;transl_table=11
AFIJ01000045.1	Genbank	gene	49359	52493	.	-	.	ID=gene-HMPREF1039_0596;Name=HMPREF1039_0596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0596
AFIJ01000045.1	Genbank	CDS	49359	52493	.	-	0	ID=cds-EGL35151.1;Parent=gene-HMPREF1039_0596;Dbxref=NCBI_GP:EGL35151.1;Name=EGL35151.1;Note=identified by match to protein family HMM PF00873%3B match to protein family HMM TIGR00915;gbkey=CDS;locus_tag=HMPREF1039_0596;product=RND transporter%2C HAE1 family;protein_id=EGL35151.1;transl_table=11
AFIJ01000045.1	Genbank	gene	52505	53641	.	-	.	ID=gene-HMPREF1039_0597;Name=HMPREF1039_0597;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0597
AFIJ01000045.1	Genbank	CDS	52505	53641	.	-	0	ID=cds-EGL35138.1;Parent=gene-HMPREF1039_0597;Dbxref=NCBI_GP:EGL35138.1;Name=EGL35138.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF1039_0597;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EGL35138.1;transl_table=11
AFIJ01000045.1	Genbank	gene	53625	54221	.	-	.	ID=gene-HMPREF1039_0598;Name=HMPREF1039_0598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0598
AFIJ01000045.1	Genbank	CDS	53625	54221	.	-	0	ID=cds-EGL35119.1;Parent=gene-HMPREF1039_0598;Dbxref=NCBI_GP:EGL35119.1;Name=EGL35119.1;Note=identified by match to protein family HMM PF00440;gbkey=CDS;locus_tag=HMPREF1039_0598;product=transcriptional regulator%2C TetR family;protein_id=EGL35119.1;transl_table=11
AFIJ01000045.1	Genbank	gene	54443	55930	.	-	.	ID=gene-HMPREF1039_0599;Name=HMPREF1039_0599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0599
AFIJ01000045.1	Genbank	CDS	54443	55930	.	-	0	ID=cds-EGL35101.1;Parent=gene-HMPREF1039_0599;Dbxref=NCBI_GP:EGL35101.1;Name=EGL35101.1;Note=identified by match to protein family HMM PF07656;gbkey=CDS;locus_tag=HMPREF1039_0599;product=hypothetical protein;protein_id=EGL35101.1;transl_table=11
AFIJ01000045.1	Genbank	gene	56084	56866	.	-	.	ID=gene-HMPREF1039_0600;Name=HMPREF1039_0600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0600
AFIJ01000045.1	Genbank	CDS	56084	56866	.	-	0	ID=cds-EGL35139.1;Parent=gene-HMPREF1039_0600;Dbxref=NCBI_GP:EGL35139.1;Name=EGL35139.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF1039_0600;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EGL35139.1;transl_table=11
AFIJ01000045.1	Genbank	gene	56868	56981	.	-	.	ID=gene-HMPREF1039_0601;Name=HMPREF1039_0601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0601
AFIJ01000045.1	Genbank	CDS	56868	56981	.	-	0	ID=cds-EGL35118.1;Parent=gene-HMPREF1039_0601;Dbxref=NCBI_GP:EGL35118.1;Name=EGL35118.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0601;product=hypothetical protein;protein_id=EGL35118.1;transl_table=11
AFIJ01000045.1	Genbank	gene	57062	58015	.	+	.	ID=gene-HMPREF1039_0602;Name=HMPREF1039_0602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0602
AFIJ01000045.1	Genbank	CDS	57062	58015	.	+	0	ID=cds-EGL35152.1;Parent=gene-HMPREF1039_0602;Dbxref=NCBI_GP:EGL35152.1;Name=EGL35152.1;Note=identified by match to protein family HMM PF01544;gbkey=CDS;locus_tag=HMPREF1039_0602;product=CorA-like protein;protein_id=EGL35152.1;transl_table=11
AFIJ01000045.1	Genbank	gene	58113	58511	.	-	.	ID=gene-HMPREF1039_0603;Name=HMPREF1039_0603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0603
AFIJ01000045.1	Genbank	CDS	58113	58511	.	-	0	ID=cds-EGL35106.1;Parent=gene-HMPREF1039_0603;Dbxref=NCBI_GP:EGL35106.1;Name=EGL35106.1;gbkey=CDS;locus_tag=HMPREF1039_0603;product=hypothetical protein;protein_id=EGL35106.1;transl_table=11
AFIJ01000045.1	Genbank	gene	58580	58870	.	-	.	ID=gene-HMPREF1039_0604;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0604
AFIJ01000045.1	Genbank	CDS	58580	58870	.	-	0	ID=cds-EGL35164.1;Parent=gene-HMPREF1039_0604;Dbxref=NCBI_GP:EGL35164.1;Name=EGL35164.1;Note=identified by match to protein family HMM PF01016%3B match to protein family HMM TIGR00062;gbkey=CDS;gene=rpmA;locus_tag=HMPREF1039_0604;product=ribosomal protein L27;protein_id=EGL35164.1;transl_table=11
AFIJ01000045.1	Genbank	gene	58863	59198	.	-	.	ID=gene-HMPREF1039_0605;Name=HMPREF1039_0605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0605
AFIJ01000045.1	Genbank	CDS	58863	59198	.	-	0	ID=cds-EGL35161.1;Parent=gene-HMPREF1039_0605;Dbxref=NCBI_GP:EGL35161.1;Name=EGL35161.1;Note=identified by match to protein family HMM PF04327;gbkey=CDS;locus_tag=HMPREF1039_0605;product=hypothetical protein;protein_id=EGL35161.1;transl_table=11
AFIJ01000045.1	Genbank	gene	59198	59509	.	-	.	ID=gene-HMPREF1039_0606;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=HMPREF1039_0606
AFIJ01000045.1	Genbank	CDS	59198	59509	.	-	0	ID=cds-EGL35111.1;Parent=gene-HMPREF1039_0606;Dbxref=NCBI_GP:EGL35111.1;Name=EGL35111.1;Note=identified by match to protein family HMM PF00829%3B match to protein family HMM TIGR00061;gbkey=CDS;gene=rplU;locus_tag=HMPREF1039_0606;product=ribosomal protein L21;protein_id=EGL35111.1;transl_table=11
AFIJ01000045.1	Genbank	gene	59685	60401	.	-	.	ID=gene-HMPREF1039_0607;Name=HMPREF1039_0607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0607
AFIJ01000045.1	Genbank	CDS	59685	60401	.	-	0	ID=cds-EGL35163.1;Parent=gene-HMPREF1039_0607;Dbxref=NCBI_GP:EGL35163.1;Name=EGL35163.1;gbkey=CDS;locus_tag=HMPREF1039_0607;product=putative DNA repair protein RecO;protein_id=EGL35163.1;transl_table=11
AFIJ01000045.1	Genbank	gene	60367	61722	.	-	.	ID=gene-HMPREF1039_0608;Name=HMPREF1039_0608;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0608
AFIJ01000045.1	Genbank	CDS	60367	61722	.	-	0	ID=cds-EGL35108.1;Parent=gene-HMPREF1039_0608;Dbxref=NCBI_GP:EGL35108.1;Name=EGL35108.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01595%3B match to protein family HMM PF03471;gbkey=CDS;locus_tag=HMPREF1039_0608;product=hypothetical protein;protein_id=EGL35108.1;transl_table=11
AFIJ01000045.1	Genbank	gene	61735	61869	.	-	.	ID=gene-HMPREF1039_0609;Name=HMPREF1039_0609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0609
AFIJ01000045.1	Genbank	CDS	61735	61869	.	-	0	ID=cds-EGL35096.1;Parent=gene-HMPREF1039_0609;Dbxref=NCBI_GP:EGL35096.1;Name=EGL35096.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0609;product=hypothetical protein;protein_id=EGL35096.1;transl_table=11
AFIJ01000045.1	Genbank	gene	61875	62633	.	-	.	ID=gene-HMPREF1039_0610;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=HMPREF1039_0610
AFIJ01000045.1	Genbank	CDS	61875	62633	.	-	0	ID=cds-EGL35087.1;Parent=gene-HMPREF1039_0610;Dbxref=NCBI_GP:EGL35087.1;Name=EGL35087.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01926%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00436;gbkey=CDS;gene=era;locus_tag=HMPREF1039_0610;product=ribosome biogenesis GTPase Era;protein_id=EGL35087.1;transl_table=11
AFIJ01000045.1	Genbank	gene	62649	63041	.	-	.	ID=gene-HMPREF1039_0611;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=HMPREF1039_0611
AFIJ01000045.1	Genbank	CDS	62649	63041	.	-	0	ID=cds-EGL35123.1;Parent=gene-HMPREF1039_0611;Dbxref=NCBI_GP:EGL35123.1;Name=EGL35123.1;Note=identified by match to protein family HMM PF00383%3B match to protein family HMM TIGR01354;gbkey=CDS;gene=cdd;locus_tag=HMPREF1039_0611;product=cytidine deaminase;protein_id=EGL35123.1;transl_table=11
AFIJ01000045.1	Genbank	gene	63038	63511	.	-	.	ID=gene-HMPREF1039_0612;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=HMPREF1039_0612
AFIJ01000045.1	Genbank	CDS	63038	63511	.	-	0	ID=cds-EGL35141.1;Parent=gene-HMPREF1039_0612;Dbxref=NCBI_GP:EGL35141.1;Name=EGL35141.1;Note=identified by match to protein family HMM PF02130%3B match to protein family HMM TIGR00043;gbkey=CDS;gene=ybeY;locus_tag=HMPREF1039_0612;product=translation metalloprotein YbeY;protein_id=EGL35141.1;transl_table=11
AFIJ01000045.1	Genbank	gene	63508	64482	.	-	.	ID=gene-HMPREF1039_0613;Name=HMPREF1039_0613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0613
AFIJ01000045.1	Genbank	CDS	63508	64482	.	-	0	ID=cds-EGL35146.1;Parent=gene-HMPREF1039_0613;Dbxref=NCBI_GP:EGL35146.1;Name=EGL35146.1;Note=identified by match to protein family HMM PF02562;gbkey=CDS;locus_tag=HMPREF1039_0613;product=PhoH family protein;protein_id=EGL35146.1;transl_table=11
AFIJ01000045.1	Genbank	gene	64466	65455	.	-	.	ID=gene-HMPREF1039_0614;Name=HMPREF1039_0614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0614
AFIJ01000045.1	Genbank	CDS	64466	65455	.	-	0	ID=cds-EGL35126.1;Parent=gene-HMPREF1039_0614;Dbxref=NCBI_GP:EGL35126.1;Name=EGL35126.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR01212;gbkey=CDS;locus_tag=HMPREF1039_0614;product=radical SAM protein%2C TIGR01212 family;protein_id=EGL35126.1;transl_table=11
AFIJ01000045.1	Genbank	gene	65607	68990	.	-	.	ID=gene-HMPREF1039_0615;Name=HMPREF1039_0615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0615
AFIJ01000045.1	Genbank	CDS	65607	68990	.	-	0	ID=cds-EGL35132.1;Parent=gene-HMPREF1039_0615;Dbxref=NCBI_GP:EGL35132.1;Name=EGL35132.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_0615;product=Hep/Hag repeat protein;protein_id=EGL35132.1;transl_table=11
AFIJ01000045.1	Genbank	gene	69187	69837	.	-	.	ID=gene-HMPREF1039_0616;Name=HMPREF1039_0616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0616
AFIJ01000045.1	Genbank	CDS	69187	69837	.	-	0	ID=cds-EGL35159.1;Parent=gene-HMPREF1039_0616;Dbxref=NCBI_GP:EGL35159.1;Name=EGL35159.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0616;product=hypothetical protein;protein_id=EGL35159.1;transl_table=11
AFIJ01000045.1	Genbank	gene	69834	70013	.	-	.	ID=gene-HMPREF1039_0617;Name=HMPREF1039_0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0617
AFIJ01000045.1	Genbank	CDS	69834	70013	.	-	0	ID=cds-EGL35084.1;Parent=gene-HMPREF1039_0617;Dbxref=NCBI_GP:EGL35084.1;Name=EGL35084.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0617;product=hypothetical protein;protein_id=EGL35084.1;transl_table=11
AFIJ01000045.1	Genbank	gene	70319	73006	.	-	.	ID=gene-HMPREF1039_0618;Name=HMPREF1039_0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0618
AFIJ01000045.1	Genbank	CDS	70319	73006	.	-	0	ID=cds-EGL35142.1;Parent=gene-HMPREF1039_0618;Dbxref=NCBI_GP:EGL35142.1;Name=EGL35142.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_0618;product=Hep/Hag repeat protein;protein_id=EGL35142.1;transl_table=11
AFIJ01000045.1	Genbank	gene	73279	74682	.	-	.	ID=gene-HMPREF1039_0619;Name=HMPREF1039_0619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0619
AFIJ01000045.1	Genbank	CDS	73279	74682	.	-	0	ID=cds-EGL35133.1;Parent=gene-HMPREF1039_0619;Dbxref=NCBI_GP:EGL35133.1;Name=EGL35133.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;locus_tag=HMPREF1039_0619;product=amino acid transporter;protein_id=EGL35133.1;transl_table=11
AFIJ01000045.1	Genbank	gene	74751	76082	.	-	.	ID=gene-HMPREF1039_0620;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0620
AFIJ01000045.1	Genbank	CDS	74751	76082	.	-	0	ID=cds-EGL35135.1;Parent=gene-HMPREF1039_0620;Dbxref=NCBI_GP:EGL35135.1;Name=EGL35135.1;Note=identified by match to protein family HMM PF05525%3B match to protein family HMM TIGR00796;gbkey=CDS;gene=brnQ;locus_tag=HMPREF1039_0620;product=branched-chain amino acid transport system II carrier protein;protein_id=EGL35135.1;transl_table=11
AFIJ01000045.1	Genbank	gene	76294	77439	.	-	.	ID=gene-HMPREF1039_0621;Name=HMPREF1039_0621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0621
AFIJ01000045.1	Genbank	CDS	76294	77439	.	-	0	ID=cds-EGL35120.1;Parent=gene-HMPREF1039_0621;Dbxref=NCBI_GP:EGL35120.1;Name=EGL35120.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR01140;gbkey=CDS;locus_tag=HMPREF1039_0621;product=threonine-phosphate decarboxylase;protein_id=EGL35120.1;transl_table=11
AFIJ01000045.1	Genbank	gene	77461	78414	.	-	.	ID=gene-HMPREF1039_0622;Name=HMPREF1039_0622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0622
AFIJ01000045.1	Genbank	CDS	77461	78414	.	-	0	ID=cds-EGL35116.1;Parent=gene-HMPREF1039_0622;Dbxref=NCBI_GP:EGL35116.1;Name=EGL35116.1;Note=identified by match to protein family HMM PF03186;gbkey=CDS;locus_tag=HMPREF1039_0622;product=CobD/CbiB protein;protein_id=EGL35116.1;transl_table=11
AFIJ01000045.1	Genbank	gene	78417	79943	.	-	.	ID=gene-HMPREF1039_0623;Name=cobQ;gbkey=Gene;gene=cobQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0623
AFIJ01000045.1	Genbank	CDS	78417	79943	.	-	0	ID=cds-EGL35086.1;Parent=gene-HMPREF1039_0623;Dbxref=NCBI_GP:EGL35086.1;Name=EGL35086.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00313;gbkey=CDS;gene=cobQ;locus_tag=HMPREF1039_0623;product=cobyric acid synthase CobQ;protein_id=EGL35086.1;transl_table=11
AFIJ01000045.1	Genbank	gene	79945	80091	.	-	.	ID=gene-HMPREF1039_0624;Name=HMPREF1039_0624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0624
AFIJ01000045.1	Genbank	CDS	79945	80091	.	-	0	ID=cds-EGL35078.1;Parent=gene-HMPREF1039_0624;Dbxref=NCBI_GP:EGL35078.1;Name=EGL35078.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0624;product=hypothetical protein;protein_id=EGL35078.1;transl_table=11
AFIJ01000045.1	Genbank	gene	80136	80789	.	+	.	ID=gene-HMPREF1039_0625;Name=HMPREF1039_0625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0625
AFIJ01000045.1	Genbank	CDS	80136	80789	.	+	0	ID=cds-EGL35093.1;Parent=gene-HMPREF1039_0625;Dbxref=NCBI_GP:EGL35093.1;Name=EGL35093.1;Note=identified by match to protein family HMM PF03006%3B match to protein family HMM TIGR01065;gbkey=CDS;locus_tag=HMPREF1039_0625;product=channel protein%2C hemolysin III family;protein_id=EGL35093.1;transl_table=11
AFIJ01000045.1	Genbank	gene	80937	81197	.	+	.	ID=gene-HMPREF1039_0626;Name=HMPREF1039_0626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0626
AFIJ01000045.1	Genbank	CDS	80937	81197	.	+	0	ID=cds-EGL35143.1;Parent=gene-HMPREF1039_0626;Dbxref=NCBI_GP:EGL35143.1;Name=EGL35143.1;gbkey=CDS;locus_tag=HMPREF1039_0626;product=hypothetical protein;protein_id=EGL35143.1;transl_table=11
AFIJ01000045.1	Genbank	gene	81289	82035	.	-	.	ID=gene-HMPREF1039_0627;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0627
AFIJ01000045.1	Genbank	CDS	81289	82035	.	-	0	ID=cds-EGL35125.1;Parent=gene-HMPREF1039_0627;Dbxref=NCBI_GP:EGL35125.1;Name=EGL35125.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF1039_0627;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EGL35125.1;transl_table=11
AFIJ01000045.1	Genbank	gene	82050	82889	.	-	.	ID=gene-HMPREF1039_0628;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0628
AFIJ01000045.1	Genbank	CDS	82050	82889	.	-	0	ID=cds-EGL35122.1;Parent=gene-HMPREF1039_0628;Dbxref=NCBI_GP:EGL35122.1;Name=EGL35122.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF1039_0628;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EGL35122.1;transl_table=11
AFIJ01000045.1	Genbank	gene	82950	85238	.	-	.	ID=gene-HMPREF1039_0629;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0629
AFIJ01000045.1	Genbank	CDS	82950	85238	.	-	0	ID=cds-EGL35129.1;Parent=gene-HMPREF1039_0629;Dbxref=NCBI_GP:EGL35129.1;Name=EGL35129.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;locus_tag=HMPREF1039_0629;product=formate C-acetyltransferase;protein_id=EGL35129.1;transl_table=11
AFIJ01000045.1	Genbank	gene	85366	85479	.	-	.	ID=gene-HMPREF1039_0630;Name=HMPREF1039_0630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0630
AFIJ01000045.1	Genbank	CDS	85366	85479	.	-	0	ID=cds-EGL35166.1;Parent=gene-HMPREF1039_0630;Dbxref=NCBI_GP:EGL35166.1;Name=EGL35166.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0630;product=hypothetical protein;protein_id=EGL35166.1;transl_table=11
AFIJ01000045.1	Genbank	gene	85629	85766	.	-	.	ID=gene-HMPREF1039_0631;Name=HMPREF1039_0631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0631
AFIJ01000045.1	Genbank	CDS	85629	85766	.	-	0	ID=cds-EGL35077.1;Parent=gene-HMPREF1039_0631;Dbxref=NCBI_GP:EGL35077.1;Name=EGL35077.1;gbkey=CDS;locus_tag=HMPREF1039_0631;product=hypothetical protein;protein_id=EGL35077.1;transl_table=11
AFIJ01000045.1	Genbank	gene	85985	87424	.	-	.	ID=gene-HMPREF1039_0632;Name=HMPREF1039_0632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0632
AFIJ01000045.1	Genbank	CDS	85985	87424	.	-	0	ID=cds-EGL35082.1;Parent=gene-HMPREF1039_0632;Dbxref=NCBI_GP:EGL35082.1;Name=EGL35082.1;Note=identified by match to protein family HMM PF03577;gbkey=CDS;locus_tag=HMPREF1039_0632;product=peptidase%2C C69 family;protein_id=EGL35082.1;transl_table=11
AFIJ01000045.1	Genbank	gene	87591	88403	.	-	.	ID=gene-HMPREF1039_0633;Name=HMPREF1039_0633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0633
AFIJ01000045.1	Genbank	CDS	87591	88403	.	-	0	ID=cds-EGL35165.1;Parent=gene-HMPREF1039_0633;Dbxref=NCBI_GP:EGL35165.1;Name=EGL35165.1;Note=identified by match to protein family HMM PF02110;gbkey=CDS;locus_tag=HMPREF1039_0633;product=hydroxyethylthiazole kinase;protein_id=EGL35165.1;transl_table=11
AFIJ01000045.1	Genbank	gene	88501	89442	.	-	.	ID=gene-HMPREF1039_0634;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=HMPREF1039_0634
AFIJ01000045.1	Genbank	CDS	88501	89442	.	-	0	ID=cds-EGL35089.1;Parent=gene-HMPREF1039_0634;Dbxref=NCBI_GP:EGL35089.1;Name=EGL35089.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM TIGR00064;gbkey=CDS;gene=ftsY;locus_tag=HMPREF1039_0634;product=signal recognition particle-docking protein FtsY;protein_id=EGL35089.1;transl_table=11
AFIJ01000045.1	Genbank	gene	89445	90377	.	-	.	ID=gene-HMPREF1039_0635;Name=HMPREF1039_0635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0635
AFIJ01000045.1	Genbank	CDS	89445	90377	.	-	0	ID=cds-EGL35117.1;Parent=gene-HMPREF1039_0635;Dbxref=NCBI_GP:EGL35117.1;Name=EGL35117.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02463;gbkey=CDS;locus_tag=HMPREF1039_0635;product=RecF/RecN/SMC N-terminal domain protein;protein_id=EGL35117.1;transl_table=11
AFIJ01000045.1	Genbank	gene	90353	93001	.	-	.	ID=gene-HMPREF1039_0636;Name=HMPREF1039_0636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0636
AFIJ01000045.1	Genbank	CDS	90353	93001	.	-	0	ID=cds-EGL35076.1;Parent=gene-HMPREF1039_0636;Dbxref=NCBI_GP:EGL35076.1;Name=EGL35076.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02463%3B match to protein family HMM PF06470;gbkey=CDS;locus_tag=HMPREF1039_0636;product=RecF/RecN/SMC N-terminal domain protein;protein_id=EGL35076.1;transl_table=11
AFIJ01000045.1	Genbank	gene	93178	93639	.	-	.	ID=gene-HMPREF1039_0637;Name=HMPREF1039_0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0637
AFIJ01000045.1	Genbank	CDS	93178	93639	.	-	0	ID=cds-EGL35131.1;Parent=gene-HMPREF1039_0637;Dbxref=NCBI_GP:EGL35131.1;Name=EGL35131.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;locus_tag=HMPREF1039_0637;product=transcriptional regulator%2C Rrf2 family;protein_id=EGL35131.1;transl_table=11
AFIJ01000045.1	Genbank	gene	93721	95352	.	-	.	ID=gene-HMPREF1039_0638;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=HMPREF1039_0638
AFIJ01000045.1	Genbank	CDS	93721	95352	.	-	0	ID=cds-EGL35150.1;Parent=gene-HMPREF1039_0638;Dbxref=NCBI_GP:EGL35150.1;Name=EGL35150.1;Note=identified by match to protein family HMM PF01676%3B match to protein family HMM PF06415%3B match to protein family HMM TIGR01307;gbkey=CDS;gene=gpmI;locus_tag=HMPREF1039_0638;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=EGL35150.1;transl_table=11
AFIJ01000045.1	Genbank	gene	95353	96384	.	-	.	ID=gene-HMPREF1039_0639;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=HMPREF1039_0639
AFIJ01000045.1	Genbank	CDS	95353	96384	.	-	0	ID=cds-EGL35091.1;Parent=gene-HMPREF1039_0639;Dbxref=NCBI_GP:EGL35091.1;Name=EGL35091.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;locus_tag=HMPREF1039_0639;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=EGL35091.1;transl_table=11
AFIJ01000045.1	Genbank	gene	96547	96897	.	+	.	ID=gene-HMPREF1039_0640;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=HMPREF1039_0640
AFIJ01000045.1	Genbank	tmRNA	96547	96897	.	+	.	ID=rna-HMPREF1039_0640;Parent=gene-HMPREF1039_0640;gbkey=tmRNA;gene=ssrA;locus_tag=HMPREF1039_0640
AFIJ01000045.1	Genbank	exon	96547	96897	.	+	.	ID=exon-HMPREF1039_0640-1;Parent=rna-HMPREF1039_0640;gbkey=tmRNA;gene=ssrA;locus_tag=HMPREF1039_0640
AFIJ01000045.1	Genbank	gene	96953	98098	.	-	.	ID=gene-HMPREF1039_0641;Name=HMPREF1039_0641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0641
AFIJ01000045.1	Genbank	CDS	96953	98098	.	-	0	ID=cds-EGL35169.1;Parent=gene-HMPREF1039_0641;Dbxref=NCBI_GP:EGL35169.1;Name=EGL35169.1;Note=identified by match to protein family HMM PF01520;gbkey=CDS;locus_tag=HMPREF1039_0641;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EGL35169.1;transl_table=11
AFIJ01000045.1	Genbank	gene	98095	99768	.	-	.	ID=gene-HMPREF1039_0642;Name=HMPREF1039_0642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0642
AFIJ01000045.1	Genbank	CDS	98095	99768	.	-	0	ID=cds-EGL35103.1;Parent=gene-HMPREF1039_0642;Dbxref=NCBI_GP:EGL35103.1;Name=EGL35103.1;Note=identified by match to protein family HMM PF01256%3B match to protein family HMM PF03853%3B match to protein family HMM TIGR00196%3B match to protein family HMM TIGR00197;gbkey=CDS;locus_tag=HMPREF1039_0642;product=YjeF domain protein;protein_id=EGL35103.1;transl_table=11
AFIJ01000045.1	Genbank	gene	99765	100157	.	-	.	ID=gene-HMPREF1039_0643;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0643
AFIJ01000045.1	Genbank	CDS	99765	100157	.	-	0	ID=cds-EGL35105.1;Parent=gene-HMPREF1039_0643;Dbxref=NCBI_GP:EGL35105.1;Name=EGL35105.1;Note=identified by match to protein family HMM PF01648%3B match to protein family HMM TIGR00516%3B match to protein family HMM TIGR00556;gbkey=CDS;gene=acpS;locus_tag=HMPREF1039_0643;product=holo-[acyl-carrier-protein] synthase;protein_id=EGL35105.1;transl_table=11
AFIJ01000045.1	Genbank	gene	100212	100511	.	-	.	ID=gene-HMPREF1039_0644;Name=HMPREF1039_0644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0644
AFIJ01000045.1	Genbank	CDS	100212	100511	.	-	0	ID=cds-EGL35148.1;Parent=gene-HMPREF1039_0644;Dbxref=NCBI_GP:EGL35148.1;Name=EGL35148.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0644;product=hypothetical protein;protein_id=EGL35148.1;transl_table=11
AFIJ01000045.1	Genbank	gene	100521	101744	.	-	.	ID=gene-HMPREF1039_0645;Name=HMPREF1039_0645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0645
AFIJ01000045.1	Genbank	CDS	100521	101744	.	-	0	ID=cds-EGL35153.1;Parent=gene-HMPREF1039_0645;Dbxref=NCBI_GP:EGL35153.1;Name=EGL35153.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR00656%3B match to protein family HMM TIGR00657;gbkey=CDS;locus_tag=HMPREF1039_0645;product=aspartate kinase%2C monofunctional class;protein_id=EGL35153.1;transl_table=11
AFIJ01000045.1	Genbank	gene	101903	102199	.	-	.	ID=gene-HMPREF1039_0646;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF1039_0646
AFIJ01000045.1	Genbank	RNase_P_RNA	101903	102199	.	-	.	ID=rna-HMPREF1039_0646;Parent=gene-HMPREF1039_0646;gbkey=ncRNA;gene=rnpB;locus_tag=HMPREF1039_0646;product=Bacterial RNase P class A
AFIJ01000045.1	Genbank	exon	101903	102199	.	-	.	ID=exon-HMPREF1039_0646-1;Parent=rna-HMPREF1039_0646;gbkey=ncRNA;gene=rnpB;locus_tag=HMPREF1039_0646;product=Bacterial RNase P class A
AFIJ01000045.1	Genbank	gene	102266	102913	.	-	.	ID=gene-HMPREF1039_0647;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0647
AFIJ01000045.1	Genbank	CDS	102266	102913	.	-	0	ID=cds-EGL35092.1;Parent=gene-HMPREF1039_0647;Dbxref=NCBI_GP:EGL35092.1;Name=EGL35092.1;Note=identified by match to protein family HMM PF02581%3B match to protein family HMM TIGR00693;gbkey=CDS;gene=thiE;locus_tag=HMPREF1039_0647;product=thiamine-phosphate diphosphorylase;protein_id=EGL35092.1;transl_table=11
AFIJ01000045.1	Genbank	gene	102925	104046	.	-	.	ID=gene-HMPREF1039_0648;Name=HMPREF1039_0648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0648
AFIJ01000045.1	Genbank	CDS	102925	104046	.	-	0	ID=cds-EGL35121.1;Parent=gene-HMPREF1039_0648;Dbxref=NCBI_GP:EGL35121.1;Name=EGL35121.1;Note=identified by match to protein family HMM PF01784%3B match to protein family HMM TIGR00486;gbkey=CDS;locus_tag=HMPREF1039_0648;product=dinuclear metal center protein%2C YbgI family;protein_id=EGL35121.1;transl_table=11
AFIJ01000045.1	Genbank	gene	104031	104720	.	-	.	ID=gene-HMPREF1039_0649;Name=HMPREF1039_0649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0649
AFIJ01000045.1	Genbank	CDS	104031	104720	.	-	0	ID=cds-EGL35144.1;Parent=gene-HMPREF1039_0649;Dbxref=NCBI_GP:EGL35144.1;Name=EGL35144.1;Note=identified by match to protein family HMM PF04816;gbkey=CDS;locus_tag=HMPREF1039_0649;product=hypothetical protein;protein_id=EGL35144.1;transl_table=11
AFIJ01000045.1	Genbank	gene	104900	105424	.	-	.	ID=gene-HMPREF1039_0650;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0650
AFIJ01000045.1	Genbank	CDS	104900	105424	.	-	0	ID=cds-EGL35156.1;Parent=gene-HMPREF1039_0650;Dbxref=NCBI_GP:EGL35156.1;Name=EGL35156.1;Note=identified by match to protein family HMM PF02482%3B match to protein family HMM TIGR00741;gbkey=CDS;gene=raiA;locus_tag=HMPREF1039_0650;product=ribosomal subunit interface protein;protein_id=EGL35156.1;transl_table=11
AFIJ01000045.1	Genbank	gene	105569	106774	.	-	.	ID=gene-HMPREF1039_0651;Name=HMPREF1039_0651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0651
AFIJ01000045.1	Genbank	CDS	105569	106774	.	-	0	ID=cds-EGL35080.1;Parent=gene-HMPREF1039_0651;Dbxref=NCBI_GP:EGL35080.1;Name=EGL35080.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF1039_0651;product=transporter%2C major facilitator family protein;protein_id=EGL35080.1;transl_table=11
AFIJ01000045.1	Genbank	gene	106892	107797	.	-	.	ID=gene-HMPREF1039_0652;Name=HMPREF1039_0652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0652
AFIJ01000045.1	Genbank	CDS	106892	107797	.	-	0	ID=cds-EGL35154.1;Parent=gene-HMPREF1039_0652;Dbxref=NCBI_GP:EGL35154.1;Name=EGL35154.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;locus_tag=HMPREF1039_0652;product=transcriptional regulator%2C LysR family;protein_id=EGL35154.1;transl_table=11
AFIJ01000045.1	Genbank	gene	107898	108218	.	-	.	ID=gene-HMPREF1039_0653;Name=HMPREF1039_0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0653
AFIJ01000045.1	Genbank	CDS	107898	108218	.	-	0	ID=cds-EGL35097.1;Parent=gene-HMPREF1039_0653;Dbxref=NCBI_GP:EGL35097.1;Name=EGL35097.1;gbkey=CDS;locus_tag=HMPREF1039_0653;product=hypothetical protein;protein_id=EGL35097.1;transl_table=11
AFIJ01000045.1	Genbank	gene	108338	108769	.	-	.	ID=gene-HMPREF1039_0654;Name=HMPREF1039_0654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0654
AFIJ01000045.1	Genbank	CDS	108338	108769	.	-	0	ID=cds-EGL35085.1;Parent=gene-HMPREF1039_0654;Dbxref=NCBI_GP:EGL35085.1;Name=EGL35085.1;Note=identified by match to protein family HMM PF03652%3B match to protein family HMM TIGR00250;gbkey=CDS;locus_tag=HMPREF1039_0654;product=RNAse H domain protein%2C YqgF family;protein_id=EGL35085.1;transl_table=11
AFIJ01000045.1	Genbank	gene	108766	109026	.	-	.	ID=gene-HMPREF1039_0655;Name=HMPREF1039_0655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0655
AFIJ01000045.1	Genbank	CDS	108766	109026	.	-	0	ID=cds-EGL35155.1;Parent=gene-HMPREF1039_0655;Dbxref=NCBI_GP:EGL35155.1;Name=EGL35155.1;Note=identified by match to protein family HMM PF06135;gbkey=CDS;locus_tag=HMPREF1039_0655;product=hypothetical protein;protein_id=EGL35155.1;transl_table=11
AFIJ01000045.1	Genbank	gene	109063	111672	.	-	.	ID=gene-HMPREF1039_0656;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0656
AFIJ01000045.1	Genbank	CDS	109063	111672	.	-	0	ID=cds-EGL35090.1;Parent=gene-HMPREF1039_0656;Dbxref=NCBI_GP:EGL35090.1;Name=EGL35090.1;Note=identified by match to protein family HMM PF01411%3B match to protein family HMM PF02272%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00344;gbkey=CDS;gene=alaS;locus_tag=HMPREF1039_0656;product=alanine--tRNA ligase;protein_id=EGL35090.1;transl_table=11
AFIJ01000045.1	Genbank	gene	111764	112447	.	-	.	ID=gene-HMPREF1039_0657;Name=HMPREF1039_0657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0657
AFIJ01000045.1	Genbank	CDS	111764	112447	.	-	0	ID=cds-EGL35110.1;Parent=gene-HMPREF1039_0657;Dbxref=NCBI_GP:EGL35110.1;Name=EGL35110.1;Note=identified by match to protein family HMM PF00877%3B match to protein family HMM PF01471;gbkey=CDS;locus_tag=HMPREF1039_0657;product=NlpC/P60 family protein;protein_id=EGL35110.1;transl_table=11
AFIJ01000045.1	Genbank	gene	112464	113546	.	-	.	ID=gene-HMPREF1039_0658;Name=HMPREF1039_0658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0658
AFIJ01000045.1	Genbank	CDS	112464	113546	.	-	0	ID=cds-EGL35095.1;Parent=gene-HMPREF1039_0658;Dbxref=NCBI_GP:EGL35095.1;Name=EGL35095.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF1039_0658;product=glycosyltransferase%2C group 2 family protein;protein_id=EGL35095.1;transl_table=11
AFIJ01000045.1	Genbank	gene	114271	114347	.	-	.	ID=gene-HMPREF1039_0659;Name=HMPREF1039_0659;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0659
AFIJ01000045.1	Genbank	tRNA	114271	114347	.	-	.	ID=rna-HMPREF1039_0659;Parent=gene-HMPREF1039_0659;gbkey=tRNA;locus_tag=HMPREF1039_0659;product=tRNA-Arg
AFIJ01000045.1	Genbank	exon	114271	114347	.	-	.	ID=exon-HMPREF1039_0659-1;Parent=rna-HMPREF1039_0659;gbkey=tRNA;locus_tag=HMPREF1039_0659;product=tRNA-Arg
AFIJ01000045.1	Genbank	gene	114384	114459	.	-	.	ID=gene-HMPREF1039_0660;Name=HMPREF1039_0660;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0660
AFIJ01000045.1	Genbank	tRNA	114384	114459	.	-	.	ID=rna-HMPREF1039_0660;Parent=gene-HMPREF1039_0660;gbkey=tRNA;locus_tag=HMPREF1039_0660;product=tRNA-Trp
AFIJ01000045.1	Genbank	exon	114384	114459	.	-	.	ID=exon-HMPREF1039_0660-1;Parent=rna-HMPREF1039_0660;gbkey=tRNA;locus_tag=HMPREF1039_0660;product=tRNA-Trp
##sequence-region AFIJ01000044.1 1 23508
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000044.1	Genbank	region	1	23508	.	+	.	ID=AFIJ01000044.1:1..23508;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000044.1	Genbank	gene	103	258	.	-	.	ID=gene-HMPREF1039_1499;Name=HMPREF1039_1499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1499
AFIJ01000044.1	Genbank	CDS	103	258	.	-	0	ID=cds-EGL38384.1;Parent=gene-HMPREF1039_1499;Dbxref=NCBI_GP:EGL38384.1;Name=EGL38384.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1499;product=hypothetical protein;protein_id=EGL38384.1;transl_table=11
AFIJ01000044.1	Genbank	gene	255	986	.	-	.	ID=gene-HMPREF1039_1500;Name=HMPREF1039_1500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1500
AFIJ01000044.1	Genbank	CDS	255	986	.	-	0	ID=cds-EGL38395.1;Parent=gene-HMPREF1039_1500;Dbxref=NCBI_GP:EGL38395.1;Name=EGL38395.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1500;product=hypothetical protein;protein_id=EGL38395.1;transl_table=11
AFIJ01000044.1	Genbank	gene	983	1798	.	-	.	ID=gene-HMPREF1039_1501;Name=HMPREF1039_1501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1501
AFIJ01000044.1	Genbank	CDS	983	1798	.	-	0	ID=cds-EGL38378.1;Parent=gene-HMPREF1039_1501;Dbxref=NCBI_GP:EGL38378.1;Name=EGL38378.1;Note=identified by match to protein family HMM PF02811;gbkey=CDS;locus_tag=HMPREF1039_1501;product=PHP domain protein;protein_id=EGL38378.1;transl_table=11
AFIJ01000044.1	Genbank	gene	1788	2825	.	-	.	ID=gene-HMPREF1039_1502;Name=HMPREF1039_1502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1502
AFIJ01000044.1	Genbank	CDS	1788	2825	.	-	0	ID=cds-EGL38390.1;Parent=gene-HMPREF1039_1502;Dbxref=NCBI_GP:EGL38390.1;Name=EGL38390.1;Note=identified by match to protein family HMM PF00883;gbkey=CDS;locus_tag=HMPREF1039_1502;product=cytosol aminopeptidase family%2C catalytic domain protein;protein_id=EGL38390.1;transl_table=11
AFIJ01000044.1	Genbank	gene	2822	3241	.	-	.	ID=gene-HMPREF1039_1503;Name=HMPREF1039_1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1503
AFIJ01000044.1	Genbank	CDS	2822	3241	.	-	0	ID=cds-EGL38380.1;Parent=gene-HMPREF1039_1503;Dbxref=NCBI_GP:EGL38380.1;Name=EGL38380.1;gbkey=CDS;locus_tag=HMPREF1039_1503;product=hypothetical protein;protein_id=EGL38380.1;transl_table=11
AFIJ01000044.1	Genbank	gene	3300	3413	.	-	.	ID=gene-HMPREF1039_1504;Name=HMPREF1039_1504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1504
AFIJ01000044.1	Genbank	CDS	3300	3413	.	-	0	ID=cds-EGL38381.1;Parent=gene-HMPREF1039_1504;Dbxref=NCBI_GP:EGL38381.1;Name=EGL38381.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1504;product=hypothetical protein;protein_id=EGL38381.1;transl_table=11
AFIJ01000044.1	Genbank	gene	3443	4192	.	-	.	ID=gene-HMPREF1039_1505;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1505
AFIJ01000044.1	Genbank	CDS	3443	4192	.	-	0	ID=cds-EGL38391.1;Parent=gene-HMPREF1039_1505;Dbxref=NCBI_GP:EGL38391.1;Name=EGL38391.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR02493;gbkey=CDS;gene=pflA;locus_tag=HMPREF1039_1505;product=pyruvate formate-lyase 1-activating enzyme;protein_id=EGL38391.1;transl_table=11
AFIJ01000044.1	Genbank	gene	4278	6533	.	-	.	ID=gene-HMPREF1039_1506;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1506
AFIJ01000044.1	Genbank	CDS	4278	6533	.	-	0	ID=cds-EGL38387.1;Parent=gene-HMPREF1039_1506;Dbxref=NCBI_GP:EGL38387.1;Name=EGL38387.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01255;gbkey=CDS;gene=pflB;locus_tag=HMPREF1039_1506;product=formate C-acetyltransferase;protein_id=EGL38387.1;transl_table=11
AFIJ01000044.1	Genbank	gene	6913	7347	.	-	.	ID=gene-HMPREF1039_1507;Name=HMPREF1039_1507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1507
AFIJ01000044.1	Genbank	CDS	6913	7347	.	-	0	ID=cds-EGL38385.1;Parent=gene-HMPREF1039_1507;Dbxref=NCBI_GP:EGL38385.1;Name=EGL38385.1;Note=identified by match to protein family HMM PF01592%3B match to protein family HMM TIGR01994;gbkey=CDS;locus_tag=HMPREF1039_1507;product=SUF system FeS assembly protein%2C NifU family;protein_id=EGL38385.1;transl_table=11
AFIJ01000044.1	Genbank	gene	7365	8585	.	-	.	ID=gene-HMPREF1039_1508;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1508
AFIJ01000044.1	Genbank	CDS	7365	8585	.	-	0	ID=cds-EGL38396.1;Parent=gene-HMPREF1039_1508;Dbxref=NCBI_GP:EGL38396.1;Name=EGL38396.1;Note=identified by match to protein family HMM PF00266%3B match to protein family HMM TIGR01979;gbkey=CDS;gene=sufS;locus_tag=HMPREF1039_1508;product=cysteine desulfurase%2C SufS subfamily;protein_id=EGL38396.1;transl_table=11
AFIJ01000044.1	Genbank	gene	8578	9675	.	-	.	ID=gene-HMPREF1039_1509;Name=HMPREF1039_1509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1509
AFIJ01000044.1	Genbank	CDS	8578	9675	.	-	0	ID=cds-EGL38379.1;Parent=gene-HMPREF1039_1509;Dbxref=NCBI_GP:EGL38379.1;Name=EGL38379.1;Note=identified by match to protein family HMM PF01458;gbkey=CDS;locus_tag=HMPREF1039_1509;product=SufB/sufD domain protein;protein_id=EGL38379.1;transl_table=11
AFIJ01000044.1	Genbank	gene	9693	11120	.	-	.	ID=gene-HMPREF1039_1510;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1510
AFIJ01000044.1	Genbank	CDS	9693	11120	.	-	0	ID=cds-EGL38382.1;Parent=gene-HMPREF1039_1510;Dbxref=NCBI_GP:EGL38382.1;Name=EGL38382.1;Note=identified by match to protein family HMM PF01458%3B match to protein family HMM TIGR01980;gbkey=CDS;gene=sufB;locus_tag=HMPREF1039_1510;product=FeS assembly protein SufB;protein_id=EGL38382.1;transl_table=11
AFIJ01000044.1	Genbank	gene	11135	11881	.	-	.	ID=gene-HMPREF1039_1511;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1511
AFIJ01000044.1	Genbank	CDS	11135	11881	.	-	0	ID=cds-EGL38386.1;Parent=gene-HMPREF1039_1511;Dbxref=NCBI_GP:EGL38386.1;Name=EGL38386.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR01978;gbkey=CDS;gene=sufC;locus_tag=HMPREF1039_1511;product=FeS assembly ATPase SufC;protein_id=EGL38386.1;transl_table=11
AFIJ01000044.1	Genbank	gene	12103	12300	.	-	.	ID=gene-HMPREF1039_1512;Name=HMPREF1039_1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1512
AFIJ01000044.1	Genbank	CDS	12103	12300	.	-	0	ID=cds-EGL38376.1;Parent=gene-HMPREF1039_1512;Dbxref=NCBI_GP:EGL38376.1;Name=EGL38376.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1512;product=hypothetical protein;protein_id=EGL38376.1;transl_table=11
AFIJ01000044.1	Genbank	gene	12297	13709	.	-	.	ID=gene-HMPREF1039_1513;Name=scfB;gbkey=Gene;gene=scfB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1513
AFIJ01000044.1	Genbank	CDS	12297	13709	.	-	0	ID=cds-EGL38388.1;Parent=gene-HMPREF1039_1513;Dbxref=NCBI_GP:EGL38388.1;Name=EGL38388.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03974;gbkey=CDS;gene=scfB;locus_tag=HMPREF1039_1513;product=six-Cys-in-45 modification radical SAM protein;protein_id=EGL38388.1;transl_table=11
AFIJ01000044.1	Genbank	gene	14039	15085	.	-	.	ID=gene-HMPREF1039_1514;Name=HMPREF1039_1514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1514
AFIJ01000044.1	Genbank	CDS	14039	15085	.	-	0	ID=cds-EGL38397.1;Parent=gene-HMPREF1039_1514;Dbxref=NCBI_GP:EGL38397.1;Name=EGL38397.1;Note=identified by match to protein family HMM PF01070;gbkey=CDS;locus_tag=HMPREF1039_1514;product=dehydrogenase%2C FMN-dependent;protein_id=EGL38397.1;transl_table=11
AFIJ01000044.1	Genbank	gene	15245	15934	.	-	.	ID=gene-HMPREF1039_1515;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1515
AFIJ01000044.1	Genbank	CDS	15245	15934	.	-	0	ID=cds-EGL38392.1;Parent=gene-HMPREF1039_1515;Dbxref=NCBI_GP:EGL38392.1;Name=EGL38392.1;Note=identified by match to protein family HMM PF04002%3B match to protein family HMM TIGR00608;gbkey=CDS;gene=radC;locus_tag=HMPREF1039_1515;product=putative DNA repair protein RadC;protein_id=EGL38392.1;transl_table=11
AFIJ01000044.1	Genbank	gene	15931	16491	.	-	.	ID=gene-HMPREF1039_1516;Name=maf;gbkey=Gene;gene=maf;gene_biotype=protein_coding;locus_tag=HMPREF1039_1516
AFIJ01000044.1	Genbank	CDS	15931	16491	.	-	0	ID=cds-EGL38383.1;Parent=gene-HMPREF1039_1516;Dbxref=NCBI_GP:EGL38383.1;Name=EGL38383.1;Note=identified by match to protein family HMM PF02545%3B match to protein family HMM TIGR00172;gbkey=CDS;gene=maf;locus_tag=HMPREF1039_1516;product=septum formation protein Maf;protein_id=EGL38383.1;transl_table=11
AFIJ01000044.1	Genbank	gene	16504	16776	.	-	.	ID=gene-HMPREF1039_1517;Name=HMPREF1039_1517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1517
AFIJ01000044.1	Genbank	CDS	16504	16776	.	-	0	ID=cds-EGL38377.1;Parent=gene-HMPREF1039_1517;Dbxref=NCBI_GP:EGL38377.1;Name=EGL38377.1;gbkey=CDS;locus_tag=HMPREF1039_1517;product=hypothetical protein;protein_id=EGL38377.1;transl_table=11
AFIJ01000044.1	Genbank	gene	16917	18590	.	-	.	ID=gene-HMPREF1039_1518;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1518
AFIJ01000044.1	Genbank	CDS	16917	18590	.	-	0	ID=cds-EGL38389.1;Parent=gene-HMPREF1039_1518;Dbxref=NCBI_GP:EGL38389.1;Name=EGL38389.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM PF03950%3B match to protein family HMM TIGR00440;gbkey=CDS;gene=glnS;locus_tag=HMPREF1039_1518;product=glutamine--tRNA ligase;protein_id=EGL38389.1;transl_table=11
AFIJ01000044.1	Genbank	gene	18748	19650	.	+	.	ID=gene-HMPREF1039_1519;Name=HMPREF1039_1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1519
AFIJ01000044.1	Genbank	CDS	18748	19650	.	+	0	ID=cds-EGL38393.1;Parent=gene-HMPREF1039_1519;Dbxref=NCBI_GP:EGL38393.1;Name=EGL38393.1;Note=identified by match to protein family HMM PF01557;gbkey=CDS;locus_tag=HMPREF1039_1519;product=FAH family protein;protein_id=EGL38393.1;transl_table=11
AFIJ01000044.1	Genbank	gene	19748	23503	.	-	.	ID=gene-HMPREF1039_1520;Name=HMPREF1039_1520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1520
AFIJ01000044.1	Genbank	CDS	19748	23503	.	-	0	ID=cds-EGL38394.1;Parent=gene-HMPREF1039_1520;Dbxref=NCBI_GP:EGL38394.1;Name=EGL38394.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1520;product=putative septum site-determining protein MinC;protein_id=EGL38394.1;transl_table=11
##sequence-region AFIJ01000043.1 1 675
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000043.1	Genbank	region	1	675	.	+	.	ID=AFIJ01000043.1:1..675;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000043.1	Genbank	gene	1	675	.	-	.	ID=gene-HMPREF1039_1635;Name=HMPREF1039_1635;end_range=675,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1635;partial=true;start_range=.,1
AFIJ01000043.1	Genbank	CDS	1	675	.	-	1	ID=cds-EGL39175.1;Parent=gene-HMPREF1039_1635;Dbxref=NCBI_GP:EGL39175.1;Name=EGL39175.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=675,.;gbkey=CDS;locus_tag=HMPREF1039_1635;partial=true;product=hypothetical protein;protein_id=EGL39175.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000042.1 1 1366
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000042.1	Genbank	region	1	1366	.	+	.	ID=AFIJ01000042.1:1..1366;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000042.1	Genbank	gene	1	1258	.	-	.	ID=gene-HMPREF1039_1629;Name=HMPREF1039_1629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1629;partial=true;start_range=.,1
AFIJ01000042.1	Genbank	CDS	1	1258	.	-	0	ID=cds-EGL39176.1;Parent=gene-HMPREF1039_1629;Dbxref=NCBI_GP:EGL39176.1;Name=EGL39176.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM TIGR01714;gbkey=CDS;locus_tag=HMPREF1039_1629;partial=true;product=phage replisome organizer N-terminal domain protein;protein_id=EGL39176.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000041.1 1 514
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000041.1	Genbank	region	1	514	.	+	.	ID=AFIJ01000041.1:1..514;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000041.1	Genbank	gene	1	514	.	-	.	ID=gene-HMPREF1039_1637;Name=HMPREF1039_1637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1637;partial=true;start_range=.,1
AFIJ01000041.1	Genbank	CDS	1	514	.	-	0	ID=cds-EGL39177.1;Parent=gene-HMPREF1039_1637;Dbxref=NCBI_GP:EGL39177.1;Name=EGL39177.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1637;partial=true;product=hypothetical protein;protein_id=EGL39177.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000040.1 1 1793
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000040.1	Genbank	region	1	1793	.	+	.	ID=AFIJ01000040.1:1..1793;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000040.1	Genbank	gene	114	1632	.	-	.	ID=gene-HMPREF1039_1624;Name=rrs;gbkey=Gene;gene=rrs;gene_biotype=rRNA;locus_tag=HMPREF1039_1624
AFIJ01000040.1	Genbank	rRNA	114	1632	.	-	.	ID=rna-HMPREF1039_1624;Parent=gene-HMPREF1039_1624;gbkey=rRNA;gene=rrs;locus_tag=HMPREF1039_1624;product=16S ribosomal RNA
AFIJ01000040.1	Genbank	exon	114	1632	.	-	.	ID=exon-HMPREF1039_1624-1;Parent=rna-HMPREF1039_1624;gbkey=rRNA;gene=rrs;locus_tag=HMPREF1039_1624;product=16S ribosomal RNA
##sequence-region AFIJ01000039.1 1 122540
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000039.1	Genbank	region	1	122540	.	+	.	ID=AFIJ01000039.1:1..122540;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000039.1	Genbank	gene	1	269	.	-	.	ID=gene-HMPREF1039_0416;Name=HMPREF1039_0416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0416;partial=true;start_range=.,1
AFIJ01000039.1	Genbank	CDS	1	269	.	-	0	ID=cds-EGL39209.1;Parent=gene-HMPREF1039_0416;Dbxref=NCBI_GP:EGL39209.1;Name=EGL39209.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0416;partial=true;product=hypothetical protein;protein_id=EGL39209.1;start_range=.,1;transl_table=11
AFIJ01000039.1	Genbank	gene	299	439	.	+	.	ID=gene-HMPREF1039_0417;Name=HMPREF1039_0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0417
AFIJ01000039.1	Genbank	CDS	299	439	.	+	0	ID=cds-EGL39208.1;Parent=gene-HMPREF1039_0417;Dbxref=NCBI_GP:EGL39208.1;Name=EGL39208.1;gbkey=CDS;locus_tag=HMPREF1039_0417;product=hypothetical protein;protein_id=EGL39208.1;transl_table=11
AFIJ01000039.1	Genbank	gene	731	3937	.	-	.	ID=gene-HMPREF1039_0418;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0418
AFIJ01000039.1	Genbank	CDS	731	3937	.	-	0	ID=cds-EGL39313.1;Parent=gene-HMPREF1039_0418;Dbxref=NCBI_GP:EGL39313.1;Name=EGL39313.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF01071%3B match to protein family HMM PF02142%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02786%3B match to protein family HMM PF02787%3B match to protein family HMM TIGR01369;gbkey=CDS;gene=carB;locus_tag=HMPREF1039_0418;product=carbamoyl-phosphate synthase%2C large subunit;protein_id=EGL39313.1;transl_table=11
AFIJ01000039.1	Genbank	gene	3939	4997	.	-	.	ID=gene-HMPREF1039_0419;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0419
AFIJ01000039.1	Genbank	CDS	3939	4997	.	-	0	ID=cds-EGL39220.1;Parent=gene-HMPREF1039_0419;Dbxref=NCBI_GP:EGL39220.1;Name=EGL39220.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00988%3B match to protein family HMM TIGR01368;gbkey=CDS;gene=carA;locus_tag=HMPREF1039_0419;product=carbamoyl-phosphate synthase%2C small subunit;protein_id=EGL39220.1;transl_table=11
AFIJ01000039.1	Genbank	gene	4994	6283	.	-	.	ID=gene-HMPREF1039_0420;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0420
AFIJ01000039.1	Genbank	CDS	4994	6283	.	-	0	ID=cds-EGL39246.1;Parent=gene-HMPREF1039_0420;Dbxref=NCBI_GP:EGL39246.1;Name=EGL39246.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR00857;gbkey=CDS;gene=pyrC;locus_tag=HMPREF1039_0420;product=amidohydrolase family protein;protein_id=EGL39246.1;transl_table=11
AFIJ01000039.1	Genbank	gene	6267	7208	.	-	.	ID=gene-HMPREF1039_0421;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0421
AFIJ01000039.1	Genbank	CDS	6267	7208	.	-	0	ID=cds-EGL39265.1;Parent=gene-HMPREF1039_0421;Dbxref=NCBI_GP:EGL39265.1;Name=EGL39265.1;Note=identified by match to protein family HMM PF00185%3B match to protein family HMM PF02729%3B match to protein family HMM TIGR00670;gbkey=CDS;gene=pyrB;locus_tag=HMPREF1039_0421;product=aspartate carbamoyltransferase;protein_id=EGL39265.1;transl_table=11
AFIJ01000039.1	Genbank	binding_site	7225	7316	.	-	.	ID=id-AFIJ01000039.1:7225..7316;Note=PyrR binding site%3B Rfam score 57.07;bound_moiety=PyrR;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00515
AFIJ01000039.1	Genbank	gene	7444	7992	.	-	.	ID=gene-HMPREF1039_0423;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=HMPREF1039_0423
AFIJ01000039.1	Genbank	CDS	7444	7992	.	-	0	ID=cds-EGL39189.1;Parent=gene-HMPREF1039_0423;Dbxref=NCBI_GP:EGL39189.1;Name=EGL39189.1;Note=identified by match to protein family HMM PF00156;gbkey=CDS;gene=pyrR;locus_tag=HMPREF1039_0423;product=phosphoribosyl transferase domain protein;protein_id=EGL39189.1;transl_table=11
AFIJ01000039.1	Genbank	gene	8005	8922	.	-	.	ID=gene-HMPREF1039_0424;Name=HMPREF1039_0424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0424
AFIJ01000039.1	Genbank	CDS	8005	8922	.	-	0	ID=cds-EGL39240.1;Parent=gene-HMPREF1039_0424;Dbxref=NCBI_GP:EGL39240.1;Name=EGL39240.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=HMPREF1039_0424;product=pseudouridine synthase%2C RluA family;protein_id=EGL39240.1;transl_table=11
AFIJ01000039.1	Genbank	gene	8932	9369	.	-	.	ID=gene-HMPREF1039_0425;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0425
AFIJ01000039.1	Genbank	CDS	8932	9369	.	-	0	ID=cds-EGL39309.1;Parent=gene-HMPREF1039_0425;Dbxref=NCBI_GP:EGL39309.1;Name=EGL39309.1;Note=identified by match to protein family HMM PF01252%3B match to protein family HMM TIGR00077;gbkey=CDS;gene=lspA;locus_tag=HMPREF1039_0425;product=signal peptidase II;protein_id=EGL39309.1;transl_table=11
AFIJ01000039.1	Genbank	gene	9435	9746	.	-	.	ID=gene-HMPREF1039_0426;Name=HMPREF1039_0426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0426
AFIJ01000039.1	Genbank	CDS	9435	9746	.	-	0	ID=cds-EGL39194.1;Parent=gene-HMPREF1039_0426;Dbxref=NCBI_GP:EGL39194.1;Name=EGL39194.1;Note=identified by match to protein family HMM PF01910;gbkey=CDS;locus_tag=HMPREF1039_0426;product=hypothetical protein;protein_id=EGL39194.1;transl_table=11
AFIJ01000039.1	Genbank	gene	9867	10349	.	-	.	ID=gene-HMPREF1039_0427;Name=HMPREF1039_0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0427
AFIJ01000039.1	Genbank	CDS	9867	10349	.	-	0	ID=cds-EGL39261.1;Parent=gene-HMPREF1039_0427;Dbxref=NCBI_GP:EGL39261.1;Name=EGL39261.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF1039_0427;product=hydrolase%2C NUDIX family;protein_id=EGL39261.1;transl_table=11
AFIJ01000039.1	Genbank	gene	10346	10789	.	-	.	ID=gene-HMPREF1039_0428;Name=HMPREF1039_0428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0428
AFIJ01000039.1	Genbank	CDS	10346	10789	.	-	0	ID=cds-EGL39278.1;Parent=gene-HMPREF1039_0428;Dbxref=NCBI_GP:EGL39278.1;Name=EGL39278.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0428;product=hypothetical protein;protein_id=EGL39278.1;transl_table=11
AFIJ01000039.1	Genbank	gene	10886	11224	.	-	.	ID=gene-HMPREF1039_0429;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0429
AFIJ01000039.1	Genbank	CDS	10886	11224	.	-	0	ID=cds-EGL39217.1;Parent=gene-HMPREF1039_0429;Dbxref=NCBI_GP:EGL39217.1;Name=EGL39217.1;Note=identified by match to protein family HMM PF01196%3B match to protein family HMM TIGR00059;gbkey=CDS;gene=rplQ;locus_tag=HMPREF1039_0429;product=ribosomal protein L17;protein_id=EGL39217.1;transl_table=11
AFIJ01000039.1	Genbank	gene	11242	12219	.	-	.	ID=gene-HMPREF1039_0430;Name=rpoA;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0430
AFIJ01000039.1	Genbank	CDS	11242	12219	.	-	0	ID=cds-EGL39188.1;Parent=gene-HMPREF1039_0430;Dbxref=NCBI_GP:EGL39188.1;Name=EGL39188.1;Note=identified by match to protein family HMM PF01000%3B match to protein family HMM PF01193%3B match to protein family HMM PF03118%3B match to protein family HMM TIGR02027;gbkey=CDS;gene=rpoA;locus_tag=HMPREF1039_0430;product=DNA-directed RNA polymerase%2C alpha subunit;protein_id=EGL39188.1;transl_table=11
AFIJ01000039.1	Genbank	gene	12264	12656	.	-	.	ID=gene-HMPREF1039_0431;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=HMPREF1039_0431
AFIJ01000039.1	Genbank	CDS	12264	12656	.	-	0	ID=cds-EGL39226.1;Parent=gene-HMPREF1039_0431;Dbxref=NCBI_GP:EGL39226.1;Name=EGL39226.1;Note=identified by match to protein family HMM PF00411%3B match to protein family HMM TIGR03632;gbkey=CDS;gene=rpsK;locus_tag=HMPREF1039_0431;product=30S ribosomal protein S11;protein_id=EGL39226.1;transl_table=11
AFIJ01000039.1	Genbank	gene	12685	13053	.	-	.	ID=gene-HMPREF1039_0432;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=HMPREF1039_0432
AFIJ01000039.1	Genbank	CDS	12685	13053	.	-	0	ID=cds-EGL39293.1;Parent=gene-HMPREF1039_0432;Dbxref=NCBI_GP:EGL39293.1;Name=EGL39293.1;Note=identified by match to protein family HMM PF00416%3B match to protein family HMM TIGR03631;gbkey=CDS;gene=rpsM;locus_tag=HMPREF1039_0432;product=30S ribosomal protein S13;protein_id=EGL39293.1;transl_table=11
AFIJ01000039.1	Genbank	gene	13076	13189	.	-	.	ID=gene-HMPREF1039_0433;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0433
AFIJ01000039.1	Genbank	CDS	13076	13189	.	-	0	ID=cds-EGL39229.1;Parent=gene-HMPREF1039_0433;Dbxref=NCBI_GP:EGL39229.1;Name=EGL39229.1;Note=identified by match to protein family HMM PF00444%3B match to protein family HMM TIGR01022;gbkey=CDS;gene=rpmJ;locus_tag=HMPREF1039_0433;product=ribosomal protein L36;protein_id=EGL39229.1;transl_table=11
AFIJ01000039.1	Genbank	gene	13214	13432	.	-	.	ID=gene-HMPREF1039_0434;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0434
AFIJ01000039.1	Genbank	CDS	13214	13432	.	-	0	ID=cds-EGL39282.1;Parent=gene-HMPREF1039_0434;Dbxref=NCBI_GP:EGL39282.1;Name=EGL39282.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF01176%3B match to protein family HMM TIGR00008;gbkey=CDS;gene=infA;locus_tag=HMPREF1039_0434;product=translation initiation factor IF-1;protein_id=EGL39282.1;transl_table=11
AFIJ01000039.1	Genbank	gene	13425	13712	.	-	.	ID=gene-HMPREF1039_0435;Name=HMPREF1039_0435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0435
AFIJ01000039.1	Genbank	CDS	13425	13712	.	-	0	ID=cds-EGL39204.1;Parent=gene-HMPREF1039_0435;Dbxref=NCBI_GP:EGL39204.1;Name=EGL39204.1;gbkey=CDS;locus_tag=HMPREF1039_0435;product=hypothetical protein;protein_id=EGL39204.1;transl_table=11
AFIJ01000039.1	Genbank	gene	13718	14500	.	-	.	ID=gene-HMPREF1039_0436;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=HMPREF1039_0436
AFIJ01000039.1	Genbank	CDS	13718	14500	.	-	0	ID=cds-EGL39286.1;Parent=gene-HMPREF1039_0436;Dbxref=NCBI_GP:EGL39286.1;Name=EGL39286.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM TIGR00500;gbkey=CDS;gene=map;locus_tag=HMPREF1039_0436;product=methionine aminopeptidase%2C type I;protein_id=EGL39286.1;transl_table=11
AFIJ01000039.1	Genbank	gene	14466	15116	.	-	.	ID=gene-HMPREF1039_0437;Name=HMPREF1039_0437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0437
AFIJ01000039.1	Genbank	CDS	14466	15116	.	-	0	ID=cds-EGL39272.1;Parent=gene-HMPREF1039_0437;Dbxref=NCBI_GP:EGL39272.1;Name=EGL39272.1;Note=identified by match to protein family HMM PF00406%3B match to protein family HMM PF05191%3B match to protein family HMM TIGR01351;gbkey=CDS;locus_tag=HMPREF1039_0437;product=adenylate kinase;protein_id=EGL39272.1;transl_table=11
AFIJ01000039.1	Genbank	gene	15131	16393	.	-	.	ID=gene-HMPREF1039_0438;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF1039_0438
AFIJ01000039.1	Genbank	CDS	15131	16393	.	-	0	ID=cds-EGL39297.1;Parent=gene-HMPREF1039_0438;Dbxref=NCBI_GP:EGL39297.1;Name=EGL39297.1;Note=identified by match to protein family HMM PF00344%3B match to protein family HMM TIGR00967;gbkey=CDS;gene=secY;locus_tag=HMPREF1039_0438;product=preprotein translocase%2C SecY subunit;protein_id=EGL39297.1;transl_table=11
AFIJ01000039.1	Genbank	gene	16395	16835	.	-	.	ID=gene-HMPREF1039_0439;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=HMPREF1039_0439
AFIJ01000039.1	Genbank	CDS	16395	16835	.	-	0	ID=cds-EGL39181.1;Parent=gene-HMPREF1039_0439;Dbxref=NCBI_GP:EGL39181.1;Name=EGL39181.1;Note=identified by match to protein family HMM PF00256%3B match to protein family HMM PF01305%3B match to protein family HMM TIGR01071;gbkey=CDS;gene=rplO;locus_tag=HMPREF1039_0439;product=ribosomal protein L15;protein_id=EGL39181.1;transl_table=11
AFIJ01000039.1	Genbank	gene	16857	17036	.	-	.	ID=gene-HMPREF1039_0440;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0440
AFIJ01000039.1	Genbank	CDS	16857	17036	.	-	0	ID=cds-EGL39275.1;Parent=gene-HMPREF1039_0440;Dbxref=NCBI_GP:EGL39275.1;Name=EGL39275.1;Note=identified by match to protein family HMM PF00327%3B match to protein family HMM TIGR01308;gbkey=CDS;gene=rpmD;locus_tag=HMPREF1039_0440;product=ribosomal protein L30;protein_id=EGL39275.1;transl_table=11
AFIJ01000039.1	Genbank	gene	17054	17554	.	-	.	ID=gene-HMPREF1039_0441;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0441
AFIJ01000039.1	Genbank	CDS	17054	17554	.	-	0	ID=cds-EGL39185.1;Parent=gene-HMPREF1039_0441;Dbxref=NCBI_GP:EGL39185.1;Name=EGL39185.1;Note=identified by match to protein family HMM PF00333%3B match to protein family HMM PF03719%3B match to protein family HMM TIGR01021;gbkey=CDS;gene=rpsE;locus_tag=HMPREF1039_0441;product=ribosomal protein S5;protein_id=EGL39185.1;transl_table=11
AFIJ01000039.1	Genbank	gene	17573	17932	.	-	.	ID=gene-HMPREF1039_0442;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=HMPREF1039_0442
AFIJ01000039.1	Genbank	CDS	17573	17932	.	-	0	ID=cds-EGL39256.1;Parent=gene-HMPREF1039_0442;Dbxref=NCBI_GP:EGL39256.1;Name=EGL39256.1;Note=identified by match to protein family HMM PF00861%3B match to protein family HMM TIGR00060;gbkey=CDS;gene=rplR;locus_tag=HMPREF1039_0442;product=ribosomal protein L18;protein_id=EGL39256.1;transl_table=11
AFIJ01000039.1	Genbank	gene	17967	18509	.	-	.	ID=gene-HMPREF1039_0443;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0443
AFIJ01000039.1	Genbank	CDS	17967	18509	.	-	0	ID=cds-EGL39301.1;Parent=gene-HMPREF1039_0443;Dbxref=NCBI_GP:EGL39301.1;Name=EGL39301.1;Note=identified by match to protein family HMM PF00347%3B match to protein family HMM TIGR03654;gbkey=CDS;gene=rplF;locus_tag=HMPREF1039_0443;product=ribosomal protein L6;protein_id=EGL39301.1;transl_table=11
AFIJ01000039.1	Genbank	gene	18527	18919	.	-	.	ID=gene-HMPREF1039_0444;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0444
AFIJ01000039.1	Genbank	CDS	18527	18919	.	-	0	ID=cds-EGL39216.1;Parent=gene-HMPREF1039_0444;Dbxref=NCBI_GP:EGL39216.1;Name=EGL39216.1;Note=identified by match to protein family HMM PF00410;gbkey=CDS;gene=rpsH;locus_tag=HMPREF1039_0444;product=ribosomal protein S8;protein_id=EGL39216.1;transl_table=11
AFIJ01000039.1	Genbank	gene	18949	19218	.	-	.	ID=gene-HMPREF1039_0445;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF1039_0445
AFIJ01000039.1	Genbank	CDS	18949	19218	.	-	0	ID=cds-EGL39251.1;Parent=gene-HMPREF1039_0445;Dbxref=NCBI_GP:EGL39251.1;Name=EGL39251.1;Note=identified by match to protein family HMM PF00253;gbkey=CDS;gene=rpsN;locus_tag=HMPREF1039_0445;product=ribosomal protein S14p/S29e;protein_id=EGL39251.1;transl_table=11
AFIJ01000039.1	Genbank	gene	19234	19776	.	-	.	ID=gene-HMPREF1039_0446;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0446
AFIJ01000039.1	Genbank	CDS	19234	19776	.	-	0	ID=cds-EGL39180.1;Parent=gene-HMPREF1039_0446;Dbxref=NCBI_GP:EGL39180.1;Name=EGL39180.1;Note=identified by match to protein family HMM PF00281%3B match to protein family HMM PF00673;gbkey=CDS;gene=rplE;locus_tag=HMPREF1039_0446;product=ribosomal protein L5;protein_id=EGL39180.1;transl_table=11
AFIJ01000039.1	Genbank	gene	19799	20116	.	-	.	ID=gene-HMPREF1039_0447;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF1039_0447
AFIJ01000039.1	Genbank	CDS	19799	20116	.	-	0	ID=cds-EGL39255.1;Parent=gene-HMPREF1039_0447;Dbxref=NCBI_GP:EGL39255.1;Name=EGL39255.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM TIGR01079;gbkey=CDS;gene=rplX;locus_tag=HMPREF1039_0447;product=ribosomal protein L24;protein_id=EGL39255.1;transl_table=11
AFIJ01000039.1	Genbank	gene	20135	20503	.	-	.	ID=gene-HMPREF1039_0448;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=HMPREF1039_0448
AFIJ01000039.1	Genbank	CDS	20135	20503	.	-	0	ID=cds-EGL39296.1;Parent=gene-HMPREF1039_0448;Dbxref=NCBI_GP:EGL39296.1;Name=EGL39296.1;Note=identified by match to protein family HMM PF00238%3B match to protein family HMM TIGR01067;gbkey=CDS;gene=rplN;locus_tag=HMPREF1039_0448;product=ribosomal protein L14;protein_id=EGL39296.1;transl_table=11
AFIJ01000039.1	Genbank	gene	20530	20784	.	-	.	ID=gene-HMPREF1039_0449;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0449
AFIJ01000039.1	Genbank	CDS	20530	20784	.	-	0	ID=cds-EGL39267.1;Parent=gene-HMPREF1039_0449;Dbxref=NCBI_GP:EGL39267.1;Name=EGL39267.1;Note=identified by match to protein family HMM PF00366%3B match to protein family HMM TIGR03635;gbkey=CDS;gene=rpsQ;locus_tag=HMPREF1039_0449;product=30S ribosomal protein S17;protein_id=EGL39267.1;transl_table=11
AFIJ01000039.1	Genbank	gene	20822	21022	.	-	.	ID=gene-HMPREF1039_0450;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0450
AFIJ01000039.1	Genbank	CDS	20822	21022	.	-	0	ID=cds-EGL39201.1;Parent=gene-HMPREF1039_0450;Dbxref=NCBI_GP:EGL39201.1;Name=EGL39201.1;Note=identified by match to protein family HMM PF00831%3B match to protein family HMM TIGR00012;gbkey=CDS;gene=rpmC;locus_tag=HMPREF1039_0450;product=ribosomal protein L29;protein_id=EGL39201.1;transl_table=11
AFIJ01000039.1	Genbank	gene	21012	21449	.	-	.	ID=gene-HMPREF1039_0451;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=HMPREF1039_0451
AFIJ01000039.1	Genbank	CDS	21012	21449	.	-	0	ID=cds-EGL39312.1;Parent=gene-HMPREF1039_0451;Dbxref=NCBI_GP:EGL39312.1;Name=EGL39312.1;Note=identified by match to protein family HMM PF00252%3B match to protein family HMM TIGR01164;gbkey=CDS;gene=rplP;locus_tag=HMPREF1039_0451;product=ribosomal protein L16;protein_id=EGL39312.1;transl_table=11
AFIJ01000039.1	Genbank	gene	21449	22120	.	-	.	ID=gene-HMPREF1039_0452;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0452
AFIJ01000039.1	Genbank	CDS	21449	22120	.	-	0	ID=cds-EGL39232.1;Parent=gene-HMPREF1039_0452;Dbxref=NCBI_GP:EGL39232.1;Name=EGL39232.1;Note=identified by match to protein family HMM PF00189%3B match to protein family HMM PF00417%3B match to protein family HMM PF07650%3B match to protein family HMM TIGR01009;gbkey=CDS;gene=rpsC;locus_tag=HMPREF1039_0452;product=ribosomal protein S3;protein_id=EGL39232.1;transl_table=11
AFIJ01000039.1	Genbank	gene	22134	22469	.	-	.	ID=gene-HMPREF1039_0453;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=HMPREF1039_0453
AFIJ01000039.1	Genbank	CDS	22134	22469	.	-	0	ID=cds-EGL39249.1;Parent=gene-HMPREF1039_0453;Dbxref=NCBI_GP:EGL39249.1;Name=EGL39249.1;Note=identified by match to protein family HMM PF00237%3B match to protein family HMM TIGR01044;gbkey=CDS;gene=rplV;locus_tag=HMPREF1039_0453;product=ribosomal protein L22;protein_id=EGL39249.1;transl_table=11
AFIJ01000039.1	Genbank	gene	22484	22762	.	-	.	ID=gene-HMPREF1039_0454;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0454
AFIJ01000039.1	Genbank	CDS	22484	22762	.	-	0	ID=cds-EGL39207.1;Parent=gene-HMPREF1039_0454;Dbxref=NCBI_GP:EGL39207.1;Name=EGL39207.1;Note=identified by match to protein family HMM PF00203%3B match to protein family HMM TIGR01050;gbkey=CDS;gene=rpsS;locus_tag=HMPREF1039_0454;product=ribosomal protein S19;protein_id=EGL39207.1;transl_table=11
AFIJ01000039.1	Genbank	gene	22785	23612	.	-	.	ID=gene-HMPREF1039_0455;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0455
AFIJ01000039.1	Genbank	CDS	22785	23612	.	-	0	ID=cds-EGL39285.1;Parent=gene-HMPREF1039_0455;Dbxref=NCBI_GP:EGL39285.1;Name=EGL39285.1;Note=identified by match to protein family HMM PF00181%3B match to protein family HMM PF03947%3B match to protein family HMM TIGR01171;gbkey=CDS;gene=rplB;locus_tag=HMPREF1039_0455;product=ribosomal protein L2;protein_id=EGL39285.1;transl_table=11
AFIJ01000039.1	Genbank	gene	23644	23928	.	-	.	ID=gene-HMPREF1039_0456;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=HMPREF1039_0456
AFIJ01000039.1	Genbank	CDS	23644	23928	.	-	0	ID=cds-EGL39224.1;Parent=gene-HMPREF1039_0456;Dbxref=NCBI_GP:EGL39224.1;Name=EGL39224.1;Note=identified by match to protein family HMM PF00276;gbkey=CDS;gene=rplW;locus_tag=HMPREF1039_0456;product=ribosomal protein L23;protein_id=EGL39224.1;transl_table=11
AFIJ01000039.1	Genbank	gene	23928	24551	.	-	.	ID=gene-HMPREF1039_0457;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0457
AFIJ01000039.1	Genbank	CDS	23928	24551	.	-	0	ID=cds-EGL39258.1;Parent=gene-HMPREF1039_0457;Dbxref=NCBI_GP:EGL39258.1;Name=EGL39258.1;Note=identified by match to protein family HMM PF00573%3B match to protein family HMM TIGR03953;gbkey=CDS;gene=rplD;locus_tag=HMPREF1039_0457;product=50S ribosomal protein L4;protein_id=EGL39258.1;transl_table=11
AFIJ01000039.1	Genbank	gene	24584	25222	.	-	.	ID=gene-HMPREF1039_0458;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0458
AFIJ01000039.1	Genbank	CDS	24584	25222	.	-	0	ID=cds-EGL39190.1;Parent=gene-HMPREF1039_0458;Dbxref=NCBI_GP:EGL39190.1;Name=EGL39190.1;Note=identified by match to protein family HMM PF00297%3B match to protein family HMM TIGR03625;gbkey=CDS;gene=rplC;locus_tag=HMPREF1039_0458;product=50S ribosomal protein L3;protein_id=EGL39190.1;transl_table=11
AFIJ01000039.1	Genbank	gene	25237	25548	.	-	.	ID=gene-HMPREF1039_0459;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0459
AFIJ01000039.1	Genbank	CDS	25237	25548	.	-	0	ID=cds-EGL39197.1;Parent=gene-HMPREF1039_0459;Dbxref=NCBI_GP:EGL39197.1;Name=EGL39197.1;Note=identified by match to protein family HMM PF00338%3B match to protein family HMM TIGR01049;gbkey=CDS;gene=rpsJ;locus_tag=HMPREF1039_0459;product=ribosomal protein S10;protein_id=EGL39197.1;transl_table=11
AFIJ01000039.1	Genbank	gene	25721	25855	.	+	.	ID=gene-HMPREF1039_0460;Name=HMPREF1039_0460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0460
AFIJ01000039.1	Genbank	CDS	25721	25855	.	+	0	ID=cds-EGL39274.1;Parent=gene-HMPREF1039_0460;Dbxref=NCBI_GP:EGL39274.1;Name=EGL39274.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0460;product=hypothetical protein;protein_id=EGL39274.1;transl_table=11
AFIJ01000039.1	Genbank	gene	25893	27080	.	-	.	ID=gene-HMPREF1039_0461;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF1039_0461
AFIJ01000039.1	Genbank	CDS	25893	27080	.	-	0	ID=cds-EGL39221.1;Parent=gene-HMPREF1039_0461;Dbxref=NCBI_GP:EGL39221.1;Name=EGL39221.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;locus_tag=HMPREF1039_0461;product=translation elongation factor Tu;protein_id=EGL39221.1;transl_table=11
AFIJ01000039.1	Genbank	gene	27113	29185	.	-	.	ID=gene-HMPREF1039_0462;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0462
AFIJ01000039.1	Genbank	CDS	27113	29185	.	-	0	ID=cds-EGL39281.1;Parent=gene-HMPREF1039_0462;Dbxref=NCBI_GP:EGL39281.1;Name=EGL39281.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=HMPREF1039_0462;product=translation elongation factor G;protein_id=EGL39281.1;transl_table=11
AFIJ01000039.1	Genbank	gene	29217	29687	.	-	.	ID=gene-HMPREF1039_0463;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0463
AFIJ01000039.1	Genbank	CDS	29217	29687	.	-	0	ID=cds-EGL39266.1;Parent=gene-HMPREF1039_0463;Dbxref=NCBI_GP:EGL39266.1;Name=EGL39266.1;Note=identified by match to protein family HMM PF00177%3B match to protein family HMM TIGR01029;gbkey=CDS;gene=rpsG;locus_tag=HMPREF1039_0463;product=ribosomal protein S7;protein_id=EGL39266.1;transl_table=11
AFIJ01000039.1	Genbank	gene	29733	30104	.	-	.	ID=gene-HMPREF1039_0464;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=HMPREF1039_0464
AFIJ01000039.1	Genbank	CDS	29733	30104	.	-	0	ID=cds-EGL39203.1;Parent=gene-HMPREF1039_0464;Dbxref=NCBI_GP:EGL39203.1;Name=EGL39203.1;Note=identified by match to protein family HMM PF00164%3B match to protein family HMM TIGR00981;gbkey=CDS;gene=rpsL;locus_tag=HMPREF1039_0464;product=ribosomal protein S12;protein_id=EGL39203.1;transl_table=11
AFIJ01000039.1	Genbank	gene	30183	30428	.	-	.	ID=gene-HMPREF1039_0465;Name=HMPREF1039_0465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0465
AFIJ01000039.1	Genbank	CDS	30183	30428	.	-	0	ID=cds-EGL39230.1;Parent=gene-HMPREF1039_0465;Dbxref=NCBI_GP:EGL39230.1;Name=EGL39230.1;gbkey=CDS;locus_tag=HMPREF1039_0465;product=ribosomal protein L7ae family protein;protein_id=EGL39230.1;transl_table=11
AFIJ01000039.1	Genbank	gene	30669	34898	.	-	.	ID=gene-HMPREF1039_0466;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0466
AFIJ01000039.1	Genbank	CDS	30669	34898	.	-	0	ID=cds-EGL39298.1;Parent=gene-HMPREF1039_0466;Dbxref=NCBI_GP:EGL39298.1;Name=EGL39298.1;Note=identified by match to protein family HMM PF00623%3B match to protein family HMM PF04983%3B match to protein family HMM PF04997%3B match to protein family HMM PF04998%3B match to protein family HMM PF05000%3B match to protein family HMM TIGR02386;gbkey=CDS;gene=rpoC;locus_tag=HMPREF1039_0466;product=DNA-directed RNA polymerase%2C beta' subunit;protein_id=EGL39298.1;transl_table=11
AFIJ01000039.1	Genbank	gene	34920	38636	.	-	.	ID=gene-HMPREF1039_0467;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0467
AFIJ01000039.1	Genbank	CDS	34920	38636	.	-	0	ID=cds-EGL39233.1;Parent=gene-HMPREF1039_0467;Dbxref=NCBI_GP:EGL39233.1;Name=EGL39233.1;Note=identified by match to protein family HMM PF00562%3B match to protein family HMM PF04560%3B match to protein family HMM PF04561%3B match to protein family HMM PF04563%3B match to protein family HMM PF04565%3B match to protein family HMM TIGR02013;gbkey=CDS;gene=rpoB;locus_tag=HMPREF1039_0467;product=DNA-directed RNA polymerase%2C beta subunit;protein_id=EGL39233.1;transl_table=11
AFIJ01000039.1	Genbank	gene	38846	40102	.	-	.	ID=gene-HMPREF1039_0468;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0468
AFIJ01000039.1	Genbank	CDS	38846	40102	.	-	0	ID=cds-EGL39303.1;Parent=gene-HMPREF1039_0468;Dbxref=NCBI_GP:EGL39303.1;Name=EGL39303.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00234;gbkey=CDS;gene=tyrS;locus_tag=HMPREF1039_0468;product=tyrosine--tRNA ligase;protein_id=EGL39303.1;transl_table=11
AFIJ01000039.1	Genbank	gene	40170	42101	.	-	.	ID=gene-HMPREF1039_0469;Name=HMPREF1039_0469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0469
AFIJ01000039.1	Genbank	CDS	40170	42101	.	-	0	ID=cds-EGL39300.1;Parent=gene-HMPREF1039_0469;Dbxref=NCBI_GP:EGL39300.1;Name=EGL39300.1;Note=identified by match to protein family HMM PF06874;gbkey=CDS;locus_tag=HMPREF1039_0469;product=firmicute fructose-1%2C6-bisphosphatase;protein_id=EGL39300.1;transl_table=11
AFIJ01000039.1	Genbank	gene	42118	42249	.	-	.	ID=gene-HMPREF1039_0470;Name=HMPREF1039_0470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0470
AFIJ01000039.1	Genbank	CDS	42118	42249	.	-	0	ID=cds-EGL39196.1;Parent=gene-HMPREF1039_0470;Dbxref=NCBI_GP:EGL39196.1;Name=EGL39196.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0470;product=hypothetical protein;protein_id=EGL39196.1;transl_table=11
AFIJ01000039.1	Genbank	gene	42293	43531	.	-	.	ID=gene-HMPREF1039_0471;Name=HMPREF1039_0471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0471
AFIJ01000039.1	Genbank	CDS	42293	43531	.	-	0	ID=cds-EGL39237.1;Parent=gene-HMPREF1039_0471;Dbxref=NCBI_GP:EGL39237.1;Name=EGL39237.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF1039_0471;product=metallo-beta-lactamase domain protein;protein_id=EGL39237.1;transl_table=11
AFIJ01000039.1	Genbank	gene	43672	44937	.	-	.	ID=gene-HMPREF1039_0472;Name=HMPREF1039_0472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0472
AFIJ01000039.1	Genbank	CDS	43672	44937	.	-	0	ID=cds-EGL39263.1;Parent=gene-HMPREF1039_0472;Dbxref=NCBI_GP:EGL39263.1;Name=EGL39263.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0472;product=hypothetical protein;protein_id=EGL39263.1;transl_table=11
AFIJ01000039.1	Genbank	gene	44962	45231	.	-	.	ID=gene-HMPREF1039_0473;Name=HMPREF1039_0473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0473
AFIJ01000039.1	Genbank	CDS	44962	45231	.	-	0	ID=cds-EGL39247.1;Parent=gene-HMPREF1039_0473;Dbxref=NCBI_GP:EGL39247.1;Name=EGL39247.1;gbkey=CDS;locus_tag=HMPREF1039_0473;product=hypothetical protein;protein_id=EGL39247.1;transl_table=11
AFIJ01000039.1	Genbank	gene	45267	45617	.	-	.	ID=gene-HMPREF1039_0474;Name=HMPREF1039_0474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0474
AFIJ01000039.1	Genbank	CDS	45267	45617	.	-	0	ID=cds-EGL39305.1;Parent=gene-HMPREF1039_0474;Dbxref=NCBI_GP:EGL39305.1;Name=EGL39305.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0474;product=hypothetical protein;protein_id=EGL39305.1;transl_table=11
AFIJ01000039.1	Genbank	gene	45614	47314	.	-	.	ID=gene-HMPREF1039_0475;Name=HMPREF1039_0475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0475
AFIJ01000039.1	Genbank	CDS	45614	47314	.	-	0	ID=cds-EGL39225.1;Parent=gene-HMPREF1039_0475;Dbxref=NCBI_GP:EGL39225.1;Name=EGL39225.1;gbkey=CDS;locus_tag=HMPREF1039_0475;product=hypothetical protein;protein_id=EGL39225.1;transl_table=11
AFIJ01000039.1	Genbank	gene	47530	47976	.	-	.	ID=gene-HMPREF1039_0476;Name=HMPREF1039_0476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0476
AFIJ01000039.1	Genbank	CDS	47530	47976	.	-	0	ID=cds-EGL39308.1;Parent=gene-HMPREF1039_0476;Dbxref=NCBI_GP:EGL39308.1;Name=EGL39308.1;Note=identified by match to protein family HMM PF00582;gbkey=CDS;locus_tag=HMPREF1039_0476;product=universal stress family protein;protein_id=EGL39308.1;transl_table=11
AFIJ01000039.1	Genbank	gene	48273	49712	.	+	.	ID=gene-HMPREF1039_0477;Name=HMPREF1039_0477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0477
AFIJ01000039.1	Genbank	CDS	48273	49712	.	+	0	ID=cds-EGL39291.1;Parent=gene-HMPREF1039_0477;Dbxref=NCBI_GP:EGL39291.1;Name=EGL39291.1;Note=identified by match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF1039_0477;product=citrate transporter;protein_id=EGL39291.1;transl_table=11
AFIJ01000039.1	Genbank	gene	49977	50052	.	-	.	ID=gene-HMPREF1039_0478;Name=HMPREF1039_0478;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0478
AFIJ01000039.1	Genbank	tRNA	49977	50052	.	-	.	ID=rna-HMPREF1039_0478;Parent=gene-HMPREF1039_0478;gbkey=tRNA;locus_tag=HMPREF1039_0478;product=tRNA-Lys
AFIJ01000039.1	Genbank	exon	49977	50052	.	-	.	ID=exon-HMPREF1039_0478-1;Parent=rna-HMPREF1039_0478;gbkey=tRNA;locus_tag=HMPREF1039_0478;product=tRNA-Lys
AFIJ01000039.1	Genbank	gene	50056	50130	.	-	.	ID=gene-HMPREF1039_0479;Name=HMPREF1039_0479;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0479
AFIJ01000039.1	Genbank	tRNA	50056	50130	.	-	.	ID=rna-HMPREF1039_0479;Parent=gene-HMPREF1039_0479;gbkey=tRNA;locus_tag=HMPREF1039_0479;product=tRNA-Gln
AFIJ01000039.1	Genbank	exon	50056	50130	.	-	.	ID=exon-HMPREF1039_0479-1;Parent=rna-HMPREF1039_0479;gbkey=tRNA;locus_tag=HMPREF1039_0479;product=tRNA-Gln
AFIJ01000039.1	Genbank	gene	50132	50207	.	-	.	ID=gene-HMPREF1039_0480;Name=HMPREF1039_0480;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0480
AFIJ01000039.1	Genbank	tRNA	50132	50207	.	-	.	ID=rna-HMPREF1039_0480;Parent=gene-HMPREF1039_0480;gbkey=tRNA;locus_tag=HMPREF1039_0480;product=tRNA-His
AFIJ01000039.1	Genbank	exon	50132	50207	.	-	.	ID=exon-HMPREF1039_0480-1;Parent=rna-HMPREF1039_0480;gbkey=tRNA;locus_tag=HMPREF1039_0480;product=tRNA-His
AFIJ01000039.1	Genbank	gene	50298	51149	.	-	.	ID=gene-HMPREF1039_0481;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0481
AFIJ01000039.1	Genbank	CDS	50298	51149	.	-	0	ID=cds-EGL39236.1;Parent=gene-HMPREF1039_0481;Dbxref=NCBI_GP:EGL39236.1;Name=EGL39236.1;Note=identified by match to protein family HMM PF01564%3B match to protein family HMM TIGR00417;gbkey=CDS;gene=speE;locus_tag=HMPREF1039_0481;product=spermidine synthase;protein_id=EGL39236.1;transl_table=11
AFIJ01000039.1	Genbank	gene	51424	55752	.	+	.	ID=gene-HMPREF1039_0482;Name=HMPREF1039_0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0482
AFIJ01000039.1	Genbank	CDS	51424	55752	.	+	0	ID=cds-EGL39289.1;Parent=gene-HMPREF1039_0482;Dbxref=NCBI_GP:EGL39289.1;Name=EGL39289.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;locus_tag=HMPREF1039_0482;product=putative CoA-substrate-specific enzyme activase;protein_id=EGL39289.1;transl_table=11
AFIJ01000039.1	Genbank	gene	55863	57047	.	-	.	ID=gene-HMPREF1039_0483;Name=HMPREF1039_0483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0483
AFIJ01000039.1	Genbank	CDS	55863	57047	.	-	0	ID=cds-EGL39212.1;Parent=gene-HMPREF1039_0483;Dbxref=NCBI_GP:EGL39212.1;Name=EGL39212.1;Note=identified by match to protein family HMM PF00263;gbkey=CDS;locus_tag=HMPREF1039_0483;product=bacterial type II and III secretion system protein;protein_id=EGL39212.1;transl_table=11
AFIJ01000039.1	Genbank	gene	57058	57612	.	-	.	ID=gene-HMPREF1039_0484;Name=HMPREF1039_0484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0484
AFIJ01000039.1	Genbank	CDS	57058	57612	.	-	0	ID=cds-EGL39310.1;Parent=gene-HMPREF1039_0484;Dbxref=NCBI_GP:EGL39310.1;Name=EGL39310.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0484;product=hypothetical protein;protein_id=EGL39310.1;transl_table=11
AFIJ01000039.1	Genbank	gene	57733	58500	.	-	.	ID=gene-HMPREF1039_0485;Name=HMPREF1039_0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0485
AFIJ01000039.1	Genbank	CDS	57733	58500	.	-	0	ID=cds-EGL39234.1;Parent=gene-HMPREF1039_0485;Dbxref=NCBI_GP:EGL39234.1;Name=EGL39234.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0485;product=ABC transporter%2C ATP-binding protein;protein_id=EGL39234.1;transl_table=11
AFIJ01000039.1	Genbank	gene	58509	59159	.	-	.	ID=gene-HMPREF1039_0486;Name=HMPREF1039_0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0486
AFIJ01000039.1	Genbank	CDS	58509	59159	.	-	0	ID=cds-EGL39192.1;Parent=gene-HMPREF1039_0486;Dbxref=NCBI_GP:EGL39192.1;Name=EGL39192.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;locus_tag=HMPREF1039_0486;product=ABC transporter%2C permease protein;protein_id=EGL39192.1;transl_table=11
AFIJ01000039.1	Genbank	gene	59190	59990	.	-	.	ID=gene-HMPREF1039_0487;Name=HMPREF1039_0487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0487
AFIJ01000039.1	Genbank	CDS	59190	59990	.	-	0	ID=cds-EGL39191.1;Parent=gene-HMPREF1039_0487;Dbxref=NCBI_GP:EGL39191.1;Name=EGL39191.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF1039_0487;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EGL39191.1;transl_table=11
AFIJ01000039.1	Genbank	gene	60139	60642	.	-	.	ID=gene-HMPREF1039_0488;Name=HMPREF1039_0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0488
AFIJ01000039.1	Genbank	CDS	60139	60642	.	-	0	ID=cds-EGL39280.1;Parent=gene-HMPREF1039_0488;Dbxref=NCBI_GP:EGL39280.1;Name=EGL39280.1;gbkey=CDS;locus_tag=HMPREF1039_0488;product=hypothetical protein;protein_id=EGL39280.1;transl_table=11
AFIJ01000039.1	Genbank	gene	60676	61002	.	-	.	ID=gene-HMPREF1039_0489;Name=HMPREF1039_0489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0489
AFIJ01000039.1	Genbank	CDS	60676	61002	.	-	0	ID=cds-EGL39273.1;Parent=gene-HMPREF1039_0489;Dbxref=NCBI_GP:EGL39273.1;Name=EGL39273.1;gbkey=CDS;locus_tag=HMPREF1039_0489;product=hypothetical protein;protein_id=EGL39273.1;transl_table=11
AFIJ01000039.1	Genbank	gene	61015	61923	.	-	.	ID=gene-HMPREF1039_0490;Name=HMPREF1039_0490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0490
AFIJ01000039.1	Genbank	CDS	61015	61923	.	-	0	ID=cds-EGL39179.1;Parent=gene-HMPREF1039_0490;Dbxref=NCBI_GP:EGL39179.1;Name=EGL39179.1;gbkey=CDS;locus_tag=HMPREF1039_0490;product=hypothetical protein;protein_id=EGL39179.1;transl_table=11
AFIJ01000039.1	Genbank	gene	61933	62877	.	-	.	ID=gene-HMPREF1039_0491;Name=HMPREF1039_0491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0491
AFIJ01000039.1	Genbank	CDS	61933	62877	.	-	0	ID=cds-EGL39248.1;Parent=gene-HMPREF1039_0491;Dbxref=NCBI_GP:EGL39248.1;Name=EGL39248.1;gbkey=CDS;locus_tag=HMPREF1039_0491;product=hypothetical protein;protein_id=EGL39248.1;transl_table=11
AFIJ01000039.1	Genbank	gene	63001	63978	.	-	.	ID=gene-HMPREF1039_0492;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0492
AFIJ01000039.1	Genbank	CDS	63001	63978	.	-	0	ID=cds-EGL39294.1;Parent=gene-HMPREF1039_0492;Dbxref=NCBI_GP:EGL39294.1;Name=EGL39294.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF1039_0492;product=4-phosphoerythronate dehydrogenase;protein_id=EGL39294.1;transl_table=11
AFIJ01000039.1	Genbank	gene	64130	65431	.	-	.	ID=gene-HMPREF1039_0493;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF1039_0493
AFIJ01000039.1	Genbank	CDS	64130	65431	.	-	0	ID=cds-EGL39252.1;Parent=gene-HMPREF1039_0493;Dbxref=NCBI_GP:EGL39252.1;Name=EGL39252.1;Note=identified by match to protein family HMM PF00113%3B match to protein family HMM PF03952%3B match to protein family HMM TIGR01060;gbkey=CDS;gene=eno;locus_tag=HMPREF1039_0493;product=phosphopyruvate hydratase;protein_id=EGL39252.1;transl_table=11
AFIJ01000039.1	Genbank	gene	65512	66312	.	-	.	ID=gene-HMPREF1039_0494;Name=HMPREF1039_0494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0494
AFIJ01000039.1	Genbank	CDS	65512	66312	.	-	0	ID=cds-EGL39182.1;Parent=gene-HMPREF1039_0494;Dbxref=NCBI_GP:EGL39182.1;Name=EGL39182.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0494;product=hypothetical protein;protein_id=EGL39182.1;transl_table=11
AFIJ01000039.1	Genbank	gene	66496	67842	.	+	.	ID=gene-HMPREF1039_0495;Name=HMPREF1039_0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0495
AFIJ01000039.1	Genbank	CDS	66496	67842	.	+	0	ID=cds-EGL39259.1;Parent=gene-HMPREF1039_0495;Dbxref=NCBI_GP:EGL39259.1;Name=EGL39259.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF1039_0495;product=transporter%2C major facilitator family protein;protein_id=EGL39259.1;transl_table=11
AFIJ01000039.1	Genbank	gene	67939	68370	.	+	.	ID=gene-HMPREF1039_0496;Name=HMPREF1039_0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0496
AFIJ01000039.1	Genbank	CDS	67939	68370	.	+	0	ID=cds-EGL39199.1;Parent=gene-HMPREF1039_0496;Dbxref=NCBI_GP:EGL39199.1;Name=EGL39199.1;gbkey=CDS;locus_tag=HMPREF1039_0496;product=hypothetical protein;protein_id=EGL39199.1;transl_table=11
AFIJ01000039.1	Genbank	binding_site	68432	68532	.	+	.	ID=id-AFIJ01000039.1:68432..68532;Note=SAM riboswitch (S box leader)%3B Rfam score 62.52;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162
AFIJ01000039.1	Genbank	gene	68611	69417	.	+	.	ID=gene-HMPREF1039_0498;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0498
AFIJ01000039.1	Genbank	CDS	68611	69417	.	+	0	ID=cds-EGL39277.1;Parent=gene-HMPREF1039_0498;Dbxref=NCBI_GP:EGL39277.1;Name=EGL39277.1;Note=identified by match to protein family HMM PF03180%3B match to protein family HMM TIGR00363;gbkey=CDS;gene=metQ;locus_tag=HMPREF1039_0498;product=lipoprotein%2C YaeC family;protein_id=EGL39277.1;transl_table=11
AFIJ01000039.1	Genbank	gene	69541	69846	.	+	.	ID=gene-HMPREF1039_0499;Name=HMPREF1039_0499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0499
AFIJ01000039.1	Genbank	CDS	69541	69846	.	+	0	ID=cds-EGL39215.1;Parent=gene-HMPREF1039_0499;Dbxref=NCBI_GP:EGL39215.1;Name=EGL39215.1;Note=identified by match to protein family HMM PF00085;gbkey=CDS;locus_tag=HMPREF1039_0499;product=putative thioredoxin;protein_id=EGL39215.1;transl_table=11
AFIJ01000039.1	Genbank	gene	69896	70294	.	-	.	ID=gene-HMPREF1039_0500;Name=HMPREF1039_0500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0500
AFIJ01000039.1	Genbank	CDS	69896	70294	.	-	0	ID=cds-EGL39262.1;Parent=gene-HMPREF1039_0500;Dbxref=NCBI_GP:EGL39262.1;Name=EGL39262.1;Note=identified by match to protein family HMM PF03061;gbkey=CDS;locus_tag=HMPREF1039_0500;product=thioesterase family protein;protein_id=EGL39262.1;transl_table=11
AFIJ01000039.1	Genbank	gene	70443	70856	.	-	.	ID=gene-HMPREF1039_0501;Name=HMPREF1039_0501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0501
AFIJ01000039.1	Genbank	CDS	70443	70856	.	-	0	ID=cds-EGL39211.1;Parent=gene-HMPREF1039_0501;Dbxref=NCBI_GP:EGL39211.1;Name=EGL39211.1;Note=identified by match to protein family HMM PF00258%3B match to protein family HMM TIGR01753;gbkey=CDS;locus_tag=HMPREF1039_0501;product=flavodoxin;protein_id=EGL39211.1;transl_table=11
AFIJ01000039.1	Genbank	gene	70871	71428	.	-	.	ID=gene-HMPREF1039_0502;Name=HMPREF1039_0502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0502
AFIJ01000039.1	Genbank	CDS	70871	71428	.	-	0	ID=cds-EGL39186.1;Parent=gene-HMPREF1039_0502;Dbxref=NCBI_GP:EGL39186.1;Name=EGL39186.1;gbkey=CDS;locus_tag=HMPREF1039_0502;product=hypothetical protein;protein_id=EGL39186.1;transl_table=11
AFIJ01000039.1	Genbank	gene	71738	72403	.	+	.	ID=gene-HMPREF1039_0503;Name=HMPREF1039_0503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0503
AFIJ01000039.1	Genbank	CDS	71738	72403	.	+	0	ID=cds-EGL39276.1;Parent=gene-HMPREF1039_0503;Dbxref=NCBI_GP:EGL39276.1;Name=EGL39276.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;locus_tag=HMPREF1039_0503;product=exonuclease;protein_id=EGL39276.1;transl_table=11
AFIJ01000039.1	Genbank	gene	72434	72823	.	+	.	ID=gene-HMPREF1039_0504;Name=HMPREF1039_0504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0504
AFIJ01000039.1	Genbank	CDS	72434	72823	.	+	0	ID=cds-EGL39223.1;Parent=gene-HMPREF1039_0504;Dbxref=NCBI_GP:EGL39223.1;Name=EGL39223.1;Note=identified by match to protein family HMM PF07009;gbkey=CDS;locus_tag=HMPREF1039_0504;product=hypothetical protein;protein_id=EGL39223.1;transl_table=11
AFIJ01000039.1	Genbank	gene	72834	73013	.	+	.	ID=gene-HMPREF1039_0505;Name=HMPREF1039_0505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0505
AFIJ01000039.1	Genbank	CDS	72834	73013	.	+	0	ID=cds-EGL39299.1;Parent=gene-HMPREF1039_0505;Dbxref=NCBI_GP:EGL39299.1;Name=EGL39299.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0505;product=hypothetical protein;protein_id=EGL39299.1;transl_table=11
AFIJ01000039.1	Genbank	gene	73022	73357	.	+	.	ID=gene-HMPREF1039_0506;Name=HMPREF1039_0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0506
AFIJ01000039.1	Genbank	CDS	73022	73357	.	+	0	ID=cds-EGL39245.1;Parent=gene-HMPREF1039_0506;Dbxref=NCBI_GP:EGL39245.1;Name=EGL39245.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0506;product=heptaprenyl diphosphate synthase component I;protein_id=EGL39245.1;transl_table=11
AFIJ01000039.1	Genbank	gene	73424	73990	.	-	.	ID=gene-HMPREF1039_0507;Name=HMPREF1039_0507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0507
AFIJ01000039.1	Genbank	CDS	73424	73990	.	-	0	ID=cds-EGL39288.1;Parent=gene-HMPREF1039_0507;Dbxref=NCBI_GP:EGL39288.1;Name=EGL39288.1;Note=identified by match to protein family HMM PF01380;gbkey=CDS;locus_tag=HMPREF1039_0507;product=putative phosphoheptose isomerase;protein_id=EGL39288.1;transl_table=11
AFIJ01000039.1	Genbank	gene	74006	74566	.	-	.	ID=gene-HMPREF1039_0508;Name=cah;gbkey=Gene;gene=cah;gene_biotype=protein_coding;locus_tag=HMPREF1039_0508
AFIJ01000039.1	Genbank	CDS	74006	74566	.	-	0	ID=cds-EGL39200.1;Parent=gene-HMPREF1039_0508;Dbxref=NCBI_GP:EGL39200.1;Name=EGL39200.1;Note=identified by match to protein family HMM PF00484;gbkey=CDS;gene=cah;locus_tag=HMPREF1039_0508;product=carbonate dehydratase;protein_id=EGL39200.1;transl_table=11
AFIJ01000039.1	Genbank	gene	74577	75926	.	-	.	ID=gene-HMPREF1039_0509;Name=HMPREF1039_0509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0509
AFIJ01000039.1	Genbank	CDS	74577	75926	.	-	0	ID=cds-EGL39306.1;Parent=gene-HMPREF1039_0509;Dbxref=NCBI_GP:EGL39306.1;Name=EGL39306.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF1039_0509;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EGL39306.1;transl_table=11
AFIJ01000039.1	Genbank	gene	75923	76072	.	-	.	ID=gene-HMPREF1039_0510;Name=HMPREF1039_0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0510
AFIJ01000039.1	Genbank	CDS	75923	76072	.	-	0	ID=cds-EGL39183.1;Parent=gene-HMPREF1039_0510;Dbxref=NCBI_GP:EGL39183.1;Name=EGL39183.1;gbkey=CDS;locus_tag=HMPREF1039_0510;product=hypothetical protein;protein_id=EGL39183.1;transl_table=11
AFIJ01000039.1	Genbank	gene	76127	76543	.	-	.	ID=gene-HMPREF1039_0511;Name=HMPREF1039_0511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0511
AFIJ01000039.1	Genbank	CDS	76127	76543	.	-	0	ID=cds-EGL39302.1;Parent=gene-HMPREF1039_0511;Dbxref=NCBI_GP:EGL39302.1;Name=EGL39302.1;Note=identified by match to protein family HMM PF01575;gbkey=CDS;locus_tag=HMPREF1039_0511;product=MaoC-like protein;protein_id=EGL39302.1;transl_table=11
AFIJ01000039.1	Genbank	gene	76555	78102	.	-	.	ID=gene-HMPREF1039_0512;Name=HMPREF1039_0512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0512
AFIJ01000039.1	Genbank	CDS	76555	78102	.	-	0	ID=cds-EGL39284.1;Parent=gene-HMPREF1039_0512;Dbxref=NCBI_GP:EGL39284.1;Name=EGL39284.1;Note=identified by match to protein family HMM PF01144;gbkey=CDS;locus_tag=HMPREF1039_0512;product=CoA transferase;protein_id=EGL39284.1;transl_table=11
AFIJ01000039.1	Genbank	gene	78132	79547	.	-	.	ID=gene-HMPREF1039_0513;Name=HMPREF1039_0513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0513
AFIJ01000039.1	Genbank	CDS	78132	79547	.	-	0	ID=cds-EGL39244.1;Parent=gene-HMPREF1039_0513;Dbxref=NCBI_GP:EGL39244.1;Name=EGL39244.1;Note=identified by match to protein family HMM PF03600;gbkey=CDS;locus_tag=HMPREF1039_0513;product=citrate transporter;protein_id=EGL39244.1;transl_table=11
AFIJ01000039.1	Genbank	gene	79668	79790	.	-	.	ID=gene-HMPREF1039_0514;Name=HMPREF1039_0514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0514
AFIJ01000039.1	Genbank	CDS	79668	79790	.	-	0	ID=cds-EGL39268.1;Parent=gene-HMPREF1039_0514;Dbxref=NCBI_GP:EGL39268.1;Name=EGL39268.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0514;product=hypothetical protein;protein_id=EGL39268.1;transl_table=11
AFIJ01000039.1	Genbank	gene	79969	80169	.	-	.	ID=gene-HMPREF1039_0515;Name=HMPREF1039_0515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0515
AFIJ01000039.1	Genbank	CDS	79969	80169	.	-	0	ID=cds-EGL39270.1;Parent=gene-HMPREF1039_0515;Dbxref=NCBI_GP:EGL39270.1;Name=EGL39270.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0515;product=hypothetical protein;protein_id=EGL39270.1;transl_table=11
AFIJ01000039.1	Genbank	gene	80304	80882	.	-	.	ID=gene-HMPREF1039_0516;Name=HMPREF1039_0516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0516
AFIJ01000039.1	Genbank	CDS	80304	80882	.	-	0	ID=cds-EGL39202.1;Parent=gene-HMPREF1039_0516;Dbxref=NCBI_GP:EGL39202.1;Name=EGL39202.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0516;product=transcriptional regulator%2C LysR family;protein_id=EGL39202.1;transl_table=11
AFIJ01000039.1	Genbank	gene	80929	81888	.	-	.	ID=gene-HMPREF1039_0517;Name=HMPREF1039_0517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0517
AFIJ01000039.1	Genbank	CDS	80929	81888	.	-	0	ID=cds-EGL39238.1;Parent=gene-HMPREF1039_0517;Dbxref=NCBI_GP:EGL39238.1;Name=EGL39238.1;Note=identified by match to protein family HMM PF00725%3B match to protein family HMM PF02737;gbkey=CDS;locus_tag=HMPREF1039_0517;product=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain protein;protein_id=EGL39238.1;transl_table=11
AFIJ01000039.1	Genbank	gene	81911	83275	.	-	.	ID=gene-HMPREF1039_0518;Name=HMPREF1039_0518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0518
AFIJ01000039.1	Genbank	CDS	81911	83275	.	-	0	ID=cds-EGL39304.1;Parent=gene-HMPREF1039_0518;Dbxref=NCBI_GP:EGL39304.1;Name=EGL39304.1;Note=identified by match to protein family HMM PF02667;gbkey=CDS;locus_tag=HMPREF1039_0518;product=putative TIGR00366 family protein;protein_id=EGL39304.1;transl_table=11
AFIJ01000039.1	Genbank	gene	83669	83745	.	-	.	ID=gene-HMPREF1039_0519;Name=HMPREF1039_0519;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0519
AFIJ01000039.1	Genbank	tRNA	83669	83745	.	-	.	ID=rna-HMPREF1039_0519;Parent=gene-HMPREF1039_0519;gbkey=tRNA;locus_tag=HMPREF1039_0519;product=tRNA-Arg
AFIJ01000039.1	Genbank	exon	83669	83745	.	-	.	ID=exon-HMPREF1039_0519-1;Parent=rna-HMPREF1039_0519;gbkey=tRNA;locus_tag=HMPREF1039_0519;product=tRNA-Arg
AFIJ01000039.1	Genbank	gene	83908	84039	.	-	.	ID=gene-HMPREF1039_0520;Name=HMPREF1039_0520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0520
AFIJ01000039.1	Genbank	CDS	83908	84039	.	-	0	ID=cds-EGL39269.1;Parent=gene-HMPREF1039_0520;Dbxref=NCBI_GP:EGL39269.1;Name=EGL39269.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0520;product=hypothetical protein;protein_id=EGL39269.1;transl_table=11
AFIJ01000039.1	Genbank	gene	84124	85158	.	-	.	ID=gene-HMPREF1039_0521;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=HMPREF1039_0521
AFIJ01000039.1	Genbank	CDS	84124	85158	.	-	0	ID=cds-EGL39243.1;Parent=gene-HMPREF1039_0521;Dbxref=NCBI_GP:EGL39243.1;Name=EGL39243.1;Note=identified by match to protein family HMM PF01515%3B match to protein family HMM TIGR00651;gbkey=CDS;gene=pta;locus_tag=HMPREF1039_0521;product=phosphate acetyltransferase;protein_id=EGL39243.1;transl_table=11
AFIJ01000039.1	Genbank	gene	85370	85909	.	-	.	ID=gene-HMPREF1039_0522;Name=HMPREF1039_0522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0522
AFIJ01000039.1	Genbank	CDS	85370	85909	.	-	0	ID=cds-EGL39307.1;Parent=gene-HMPREF1039_0522;Dbxref=NCBI_GP:EGL39307.1;Name=EGL39307.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF1039_0522;product=2-oxoacid:acceptor oxidoreductase%2C gamma subunit%2C pyruvate/2-ketoisovalerate family;protein_id=EGL39307.1;transl_table=11
AFIJ01000039.1	Genbank	gene	85911	86657	.	-	.	ID=gene-HMPREF1039_0523;Name=HMPREF1039_0523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0523
AFIJ01000039.1	Genbank	CDS	85911	86657	.	-	0	ID=cds-EGL39187.1;Parent=gene-HMPREF1039_0523;Dbxref=NCBI_GP:EGL39187.1;Name=EGL39187.1;Note=identified by match to protein family HMM PF02775;gbkey=CDS;locus_tag=HMPREF1039_0523;product=thiamine pyrophosphate enzyme%2C C-terminal TPP binding domain protein;protein_id=EGL39187.1;transl_table=11
AFIJ01000039.1	Genbank	gene	86659	87726	.	-	.	ID=gene-HMPREF1039_0524;Name=HMPREF1039_0524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0524
AFIJ01000039.1	Genbank	CDS	86659	87726	.	-	0	ID=cds-EGL39228.1;Parent=gene-HMPREF1039_0524;Dbxref=NCBI_GP:EGL39228.1;Name=EGL39228.1;Note=identified by match to protein family HMM PF01855%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=HMPREF1039_0524;product=3-methyl-2-oxobutanoate dehydrogenase (ferredoxin);protein_id=EGL39228.1;transl_table=11
AFIJ01000039.1	Genbank	gene	87741	87950	.	-	.	ID=gene-HMPREF1039_0525;Name=HMPREF1039_0525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0525
AFIJ01000039.1	Genbank	CDS	87741	87950	.	-	0	ID=cds-EGL39178.1;Parent=gene-HMPREF1039_0525;Dbxref=NCBI_GP:EGL39178.1;Name=EGL39178.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF1039_0525;product=4Fe-4S binding domain protein;protein_id=EGL39178.1;transl_table=11
AFIJ01000039.1	Genbank	gene	87980	88657	.	-	.	ID=gene-HMPREF1039_0526;Name=HMPREF1039_0526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0526
AFIJ01000039.1	Genbank	CDS	87980	88657	.	-	0	ID=cds-EGL39231.1;Parent=gene-HMPREF1039_0526;Dbxref=NCBI_GP:EGL39231.1;Name=EGL39231.1;gbkey=CDS;locus_tag=HMPREF1039_0526;product=hypothetical protein;protein_id=EGL39231.1;transl_table=11
AFIJ01000039.1	Genbank	gene	89094	89639	.	-	.	ID=gene-HMPREF1039_0527;Name=HMPREF1039_0527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0527
AFIJ01000039.1	Genbank	CDS	89094	89639	.	-	0	ID=cds-EGL39198.1;Parent=gene-HMPREF1039_0527;Dbxref=NCBI_GP:EGL39198.1;Name=EGL39198.1;Note=identified by match to protein family HMM PF00255;gbkey=CDS;locus_tag=HMPREF1039_0527;product=glutathione peroxidase;protein_id=EGL39198.1;transl_table=11
AFIJ01000039.1	Genbank	gene	90095	91378	.	-	.	ID=gene-HMPREF1039_0528;Name=HMPREF1039_0528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0528
AFIJ01000039.1	Genbank	CDS	90095	91378	.	-	0	ID=cds-EGL39210.1;Parent=gene-HMPREF1039_0528;Dbxref=NCBI_GP:EGL39210.1;Name=EGL39210.1;Note=identified by match to protein family HMM PF04286;gbkey=CDS;locus_tag=HMPREF1039_0528;product=hypothetical protein;protein_id=EGL39210.1;transl_table=11
AFIJ01000039.1	Genbank	gene	91380	92651	.	-	.	ID=gene-HMPREF1039_0529;Name=HMPREF1039_0529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0529
AFIJ01000039.1	Genbank	CDS	91380	92651	.	-	0	ID=cds-EGL39239.1;Parent=gene-HMPREF1039_0529;Dbxref=NCBI_GP:EGL39239.1;Name=EGL39239.1;Note=identified by match to protein family HMM PF04286;gbkey=CDS;locus_tag=HMPREF1039_0529;product=hypothetical protein;protein_id=EGL39239.1;transl_table=11
AFIJ01000039.1	Genbank	gene	92651	93388	.	-	.	ID=gene-HMPREF1039_0530;Name=HMPREF1039_0530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0530
AFIJ01000039.1	Genbank	CDS	92651	93388	.	-	0	ID=cds-EGL39283.1;Parent=gene-HMPREF1039_0530;Dbxref=NCBI_GP:EGL39283.1;Name=EGL39283.1;gbkey=CDS;locus_tag=HMPREF1039_0530;product=hypothetical protein;protein_id=EGL39283.1;transl_table=11
AFIJ01000039.1	Genbank	gene	93599	94552	.	+	.	ID=gene-HMPREF1039_0531;Name=HMPREF1039_0531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0531
AFIJ01000039.1	Genbank	CDS	93599	94552	.	+	0	ID=cds-EGL39241.1;Parent=gene-HMPREF1039_0531;Dbxref=NCBI_GP:EGL39241.1;Name=EGL39241.1;Note=identified by match to protein family HMM PF08331;gbkey=CDS;locus_tag=HMPREF1039_0531;product=putative iron-sulfur cluster-binding protein;protein_id=EGL39241.1;transl_table=11
AFIJ01000039.1	Genbank	gene	95023	95970	.	-	.	ID=gene-HMPREF1039_0532;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0532
AFIJ01000039.1	Genbank	CDS	95023	95970	.	-	0	ID=cds-EGL39295.1;Parent=gene-HMPREF1039_0532;Dbxref=NCBI_GP:EGL39295.1;Name=EGL39295.1;Note=identified by match to protein family HMM PF01343%3B match to protein family HMM TIGR00706;gbkey=CDS;gene=sppA;locus_tag=HMPREF1039_0532;product=signal peptide peptidase SppA%2C 36K type;protein_id=EGL39295.1;transl_table=11
AFIJ01000039.1	Genbank	gene	96025	97350	.	-	.	ID=gene-HMPREF1039_0533;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0533
AFIJ01000039.1	Genbank	CDS	96025	97350	.	-	0	ID=cds-EGL39235.1;Parent=gene-HMPREF1039_0533;Dbxref=NCBI_GP:EGL39235.1;Name=EGL39235.1;Note=identified by match to protein family HMM PF00772%3B match to protein family HMM PF03796%3B match to protein family HMM TIGR00665;gbkey=CDS;gene=dnaB;locus_tag=HMPREF1039_0533;product=replicative DNA helicase;protein_id=EGL39235.1;transl_table=11
AFIJ01000039.1	Genbank	gene	97361	99268	.	-	.	ID=gene-HMPREF1039_0534;Name=lonC;gbkey=Gene;gene=lonC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0534
AFIJ01000039.1	Genbank	CDS	97361	99268	.	-	0	ID=cds-EGL39287.1;Parent=gene-HMPREF1039_0534;Dbxref=NCBI_GP:EGL39287.1;Name=EGL39287.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR02903;gbkey=CDS;gene=lonC;locus_tag=HMPREF1039_0534;product=ATP-dependent protease%2C Lon family;protein_id=EGL39287.1;transl_table=11
AFIJ01000039.1	Genbank	gene	99285	99731	.	-	.	ID=gene-HMPREF1039_0535;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=HMPREF1039_0535
AFIJ01000039.1	Genbank	CDS	99285	99731	.	-	0	ID=cds-EGL39214.1;Parent=gene-HMPREF1039_0535;Dbxref=NCBI_GP:EGL39214.1;Name=EGL39214.1;Note=identified by match to protein family HMM PF01281%3B match to protein family HMM PF03948%3B match to protein family HMM TIGR00158;gbkey=CDS;gene=rplI;locus_tag=HMPREF1039_0535;product=ribosomal protein L9;protein_id=EGL39214.1;transl_table=11
AFIJ01000039.1	Genbank	gene	99728	100939	.	-	.	ID=gene-HMPREF1039_0536;Name=HMPREF1039_0536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0536
AFIJ01000039.1	Genbank	CDS	99728	100939	.	-	0	ID=cds-EGL39311.1;Parent=gene-HMPREF1039_0536;Dbxref=NCBI_GP:EGL39311.1;Name=EGL39311.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=HMPREF1039_0536;product=DHHA1 domain protein;protein_id=EGL39311.1;transl_table=11
AFIJ01000039.1	Genbank	gene	100762	101748	.	-	.	ID=gene-HMPREF1039_0537;Name=HMPREF1039_0537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0537
AFIJ01000039.1	Genbank	CDS	100762	101748	.	-	0	ID=cds-EGL39227.1;Parent=gene-HMPREF1039_0537;Dbxref=NCBI_GP:EGL39227.1;Name=EGL39227.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0537;product=hypothetical protein;protein_id=EGL39227.1;transl_table=11
AFIJ01000039.1	Genbank	gene	101767	102684	.	-	.	ID=gene-HMPREF1039_0538;Name=HMPREF1039_0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0538
AFIJ01000039.1	Genbank	CDS	101767	102684	.	-	0	ID=cds-EGL39279.1;Parent=gene-HMPREF1039_0538;Dbxref=NCBI_GP:EGL39279.1;Name=EGL39279.1;gbkey=CDS;locus_tag=HMPREF1039_0538;product=hypothetical protein;protein_id=EGL39279.1;transl_table=11
AFIJ01000039.1	Genbank	gene	102810	104450	.	-	.	ID=gene-HMPREF1039_0539;Name=HMPREF1039_0539;Note=rnjA;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0539
AFIJ01000039.1	Genbank	CDS	102810	104450	.	-	0	ID=cds-EGL39292.1;Parent=gene-HMPREF1039_0539;Dbxref=NCBI_GP:EGL39292.1;Name=EGL39292.1;Note=identified by match to protein family HMM PF00753%3B match to protein family HMM PF07521%3B match to protein family HMM TIGR00649%3B 3.1.-.-;gbkey=CDS;locus_tag=HMPREF1039_0539;product=hypothetical protein;protein_id=EGL39292.1;transl_table=11
AFIJ01000039.1	Genbank	gene	104696	105622	.	-	.	ID=gene-HMPREF1039_0540;Name=HMPREF1039_0540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0540
AFIJ01000039.1	Genbank	CDS	104696	105622	.	-	0	ID=cds-EGL39264.1;Parent=gene-HMPREF1039_0540;Dbxref=NCBI_GP:EGL39264.1;Name=EGL39264.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0540;product=hypothetical protein;protein_id=EGL39264.1;transl_table=11
AFIJ01000039.1	Genbank	gene	105653	106453	.	-	.	ID=gene-HMPREF1039_0541;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0541
AFIJ01000039.1	Genbank	CDS	105653	106453	.	-	0	ID=cds-EGL39290.1;Parent=gene-HMPREF1039_0541;Dbxref=NCBI_GP:EGL39290.1;Name=EGL39290.1;Note=identified by match to protein family HMM PF08543%3B match to protein family HMM TIGR00097;gbkey=CDS;gene=thiD;locus_tag=HMPREF1039_0541;product=phosphomethylpyrimidine kinase;protein_id=EGL39290.1;transl_table=11
AFIJ01000039.1	Genbank	gene	106467	106967	.	-	.	ID=gene-HMPREF1039_0542;Name=HMPREF1039_0542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0542
AFIJ01000039.1	Genbank	CDS	106467	106967	.	-	0	ID=cds-EGL39218.1;Parent=gene-HMPREF1039_0542;Dbxref=NCBI_GP:EGL39218.1;Name=EGL39218.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF1039_0542;product=putative phosphohistidine phosphatase SixA;protein_id=EGL39218.1;transl_table=11
AFIJ01000039.1	Genbank	gene	106985	107338	.	-	.	ID=gene-HMPREF1039_0543;Name=HMPREF1039_0543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0543
AFIJ01000039.1	Genbank	CDS	106985	107338	.	-	0	ID=cds-EGL39213.1;Parent=gene-HMPREF1039_0543;Dbxref=NCBI_GP:EGL39213.1;Name=EGL39213.1;Note=identified by match to protein family HMM PF01022;gbkey=CDS;locus_tag=HMPREF1039_0543;product=transcriptional regulator%2C ArsR family;protein_id=EGL39213.1;transl_table=11
AFIJ01000039.1	Genbank	gene	107469	107969	.	-	.	ID=gene-HMPREF1039_0544;Name=HMPREF1039_0544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0544
AFIJ01000039.1	Genbank	CDS	107469	107969	.	-	0	ID=cds-EGL39206.1;Parent=gene-HMPREF1039_0544;Dbxref=NCBI_GP:EGL39206.1;Name=EGL39206.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF1039_0544;product=transcriptional regulator%2C Fur family;protein_id=EGL39206.1;transl_table=11
AFIJ01000039.1	Genbank	gene	107975	108787	.	-	.	ID=gene-HMPREF1039_0545;Name=HMPREF1039_0545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0545
AFIJ01000039.1	Genbank	CDS	107975	108787	.	-	0	ID=cds-EGL39253.1;Parent=gene-HMPREF1039_0545;Dbxref=NCBI_GP:EGL39253.1;Name=EGL39253.1;Note=identified by match to protein family HMM PF00950%3B match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF1039_0545;product=ABC 3 transport family protein;protein_id=EGL39253.1;transl_table=11
AFIJ01000039.1	Genbank	gene	108780	109505	.	-	.	ID=gene-HMPREF1039_0546;Name=HMPREF1039_0546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0546
AFIJ01000039.1	Genbank	CDS	108780	109505	.	-	0	ID=cds-EGL39184.1;Parent=gene-HMPREF1039_0546;Dbxref=NCBI_GP:EGL39184.1;Name=EGL39184.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0546;product=ABC transporter%2C ATP-binding protein;protein_id=EGL39184.1;transl_table=11
AFIJ01000039.1	Genbank	gene	109645	110565	.	+	.	ID=gene-HMPREF1039_0547;Name=HMPREF1039_0547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0547
AFIJ01000039.1	Genbank	CDS	109645	110565	.	+	0	ID=cds-EGL39205.1;Parent=gene-HMPREF1039_0547;Dbxref=NCBI_GP:EGL39205.1;Name=EGL39205.1;Note=identified by match to protein family HMM PF01297;gbkey=CDS;locus_tag=HMPREF1039_0547;product=ABC transporter%2C substrate-binding protein;protein_id=EGL39205.1;transl_table=11
AFIJ01000039.1	Genbank	gene	110671	111255	.	-	.	ID=gene-HMPREF1039_0548;Name=HMPREF1039_0548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0548
AFIJ01000039.1	Genbank	CDS	110671	111255	.	-	0	ID=cds-EGL39257.1;Parent=gene-HMPREF1039_0548;Dbxref=NCBI_GP:EGL39257.1;Name=EGL39257.1;Note=identified by match to protein family HMM PF01510;gbkey=CDS;locus_tag=HMPREF1039_0548;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EGL39257.1;transl_table=11
AFIJ01000039.1	Genbank	gene	111669	111953	.	-	.	ID=gene-HMPREF1039_0549;Name=HMPREF1039_0549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0549
AFIJ01000039.1	Genbank	CDS	111669	111953	.	-	0	ID=cds-EGL39222.1;Parent=gene-HMPREF1039_0549;Dbxref=NCBI_GP:EGL39222.1;Name=EGL39222.1;gbkey=CDS;locus_tag=HMPREF1039_0549;product=putative Ferredoxin-like protein FixX;protein_id=EGL39222.1;transl_table=11
AFIJ01000039.1	Genbank	gene	111955	113250	.	-	.	ID=gene-HMPREF1039_0550;Name=HMPREF1039_0550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0550
AFIJ01000039.1	Genbank	CDS	111955	113250	.	-	0	ID=cds-EGL39314.1;Parent=gene-HMPREF1039_0550;Dbxref=NCBI_GP:EGL39314.1;Name=EGL39314.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF01494;gbkey=CDS;locus_tag=HMPREF1039_0550;product=FAD dependent oxidoreductase;protein_id=EGL39314.1;transl_table=11
AFIJ01000039.1	Genbank	gene	113297	114040	.	-	.	ID=gene-HMPREF1039_0551;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0551
AFIJ01000039.1	Genbank	CDS	113297	114040	.	-	0	ID=cds-EGL39195.1;Parent=gene-HMPREF1039_0551;Dbxref=NCBI_GP:EGL39195.1;Name=EGL39195.1;Note=identified by match to protein family HMM PF01209%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR01934;gbkey=CDS;gene=ubiE;locus_tag=HMPREF1039_0551;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=EGL39195.1;transl_table=11
AFIJ01000039.1	Genbank	gene	114003	114911	.	-	.	ID=gene-HMPREF1039_0552;Name=HMPREF1039_0552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0552
AFIJ01000039.1	Genbank	CDS	114003	114911	.	-	0	ID=cds-EGL39219.1;Parent=gene-HMPREF1039_0552;Dbxref=NCBI_GP:EGL39219.1;Name=EGL39219.1;Note=identified by match to protein family HMM PF01040;gbkey=CDS;locus_tag=HMPREF1039_0552;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=EGL39219.1;transl_table=11
AFIJ01000039.1	Genbank	gene	114935	115948	.	-	.	ID=gene-HMPREF1039_0553;Name=HMPREF1039_0553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0553
AFIJ01000039.1	Genbank	CDS	114935	115948	.	-	0	ID=cds-EGL39254.1;Parent=gene-HMPREF1039_0553;Dbxref=NCBI_GP:EGL39254.1;Name=EGL39254.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;locus_tag=HMPREF1039_0553;product=polyprenyl synthetase;protein_id=EGL39254.1;transl_table=11
AFIJ01000039.1	Genbank	gene	115979	118141	.	-	.	ID=gene-HMPREF1039_0554;Name=HMPREF1039_0554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0554
AFIJ01000039.1	Genbank	CDS	115979	118141	.	-	0	ID=cds-EGL39193.1;Parent=gene-HMPREF1039_0554;Dbxref=NCBI_GP:EGL39193.1;Name=EGL39193.1;Note=identified by match to protein family HMM PF02589%3B match to protein family HMM PF02754;gbkey=CDS;locus_tag=HMPREF1039_0554;product=putative iron-sulfur cluster-binding protein;protein_id=EGL39193.1;transl_table=11
AFIJ01000039.1	Genbank	gene	118157	118702	.	-	.	ID=gene-HMPREF1039_0555;Name=HMPREF1039_0555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0555
AFIJ01000039.1	Genbank	CDS	118157	118702	.	-	0	ID=cds-EGL39271.1;Parent=gene-HMPREF1039_0555;Dbxref=NCBI_GP:EGL39271.1;Name=EGL39271.1;Note=identified by match to protein family HMM PF02589;gbkey=CDS;locus_tag=HMPREF1039_0555;product=hypothetical protein;protein_id=EGL39271.1;transl_table=11
AFIJ01000039.1	Genbank	gene	119224	119595	.	-	.	ID=gene-HMPREF1039_0556;Name=HMPREF1039_0556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0556
AFIJ01000039.1	Genbank	CDS	119224	119595	.	-	0	ID=cds-EGL39250.1;Parent=gene-HMPREF1039_0556;Dbxref=NCBI_GP:EGL39250.1;Name=EGL39250.1;Note=identified by match to protein family HMM PF07892;gbkey=CDS;locus_tag=HMPREF1039_0556;product=hypothetical protein;protein_id=EGL39250.1;transl_table=11
AFIJ01000039.1	Genbank	gene	119597	120865	.	-	.	ID=gene-HMPREF1039_0557;Name=HMPREF1039_0557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0557
AFIJ01000039.1	Genbank	CDS	119597	120865	.	-	0	ID=cds-EGL39242.1;Parent=gene-HMPREF1039_0557;Dbxref=NCBI_GP:EGL39242.1;Name=EGL39242.1;Note=identified by match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF1039_0557;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EGL39242.1;transl_table=11
AFIJ01000039.1	Genbank	gene	120865	122331	.	-	.	ID=gene-HMPREF1039_0558;Name=HMPREF1039_0558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0558
AFIJ01000039.1	Genbank	CDS	120865	122331	.	-	0	ID=cds-EGL39260.1;Parent=gene-HMPREF1039_0558;Dbxref=NCBI_GP:EGL39260.1;Name=EGL39260.1;Note=identified by match to protein family HMM PF01266%3B match to protein family HMM PF04324;gbkey=CDS;locus_tag=HMPREF1039_0558;product=FAD dependent oxidoreductase;protein_id=EGL39260.1;transl_table=11
##sequence-region AFIJ01000038.1 1 96055
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000038.1	Genbank	region	1	96055	.	+	.	ID=AFIJ01000038.1:1..96055;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000038.1	Genbank	gene	115	390	.	-	.	ID=gene-HMPREF1039_0857;Name=HMPREF1039_0857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0857
AFIJ01000038.1	Genbank	CDS	115	390	.	-	0	ID=cds-EGL39427.1;Parent=gene-HMPREF1039_0857;Dbxref=NCBI_GP:EGL39427.1;Name=EGL39427.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01541;gbkey=CDS;locus_tag=HMPREF1039_0857;product=GIY-YIG catalytic domain protein;protein_id=EGL39427.1;transl_table=11
AFIJ01000038.1	Genbank	gene	390	875	.	-	.	ID=gene-HMPREF1039_0858;Name=cypB;gbkey=Gene;gene=cypB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0858
AFIJ01000038.1	Genbank	CDS	390	875	.	-	0	ID=cds-EGL39358.1;Parent=gene-HMPREF1039_0858;Dbxref=NCBI_GP:EGL39358.1;Name=EGL39358.1;Note=identified by match to protein family HMM PF00160;gbkey=CDS;gene=cypB;locus_tag=HMPREF1039_0858;product=peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type;protein_id=EGL39358.1;transl_table=11
AFIJ01000038.1	Genbank	gene	1271	1711	.	+	.	ID=gene-HMPREF1039_0859;Name=HMPREF1039_0859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0859
AFIJ01000038.1	Genbank	CDS	1271	1711	.	+	0	ID=cds-EGL39444.1;Parent=gene-HMPREF1039_0859;Dbxref=NCBI_GP:EGL39444.1;Name=EGL39444.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=HMPREF1039_0859;product=transcriptional regulator%2C MarR family;protein_id=EGL39444.1;transl_table=11
AFIJ01000038.1	Genbank	gene	1863	3431	.	+	.	ID=gene-HMPREF1039_0860;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;locus_tag=HMPREF1039_0860
AFIJ01000038.1	Genbank	CDS	1863	3431	.	+	0	ID=cds-EGL39350.1;Parent=gene-HMPREF1039_0860;Dbxref=NCBI_GP:EGL39350.1;Name=EGL39350.1;Note=identified by match to protein family HMM PF03063%3B match to protein family HMM TIGR01703;gbkey=CDS;gene=hcp;locus_tag=HMPREF1039_0860;product=hydroxylamine reductase;protein_id=EGL39350.1;transl_table=11
AFIJ01000038.1	Genbank	gene	3513	4922	.	-	.	ID=gene-HMPREF1039_0861;Name=HMPREF1039_0861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0861
AFIJ01000038.1	Genbank	CDS	3513	4922	.	-	0	ID=cds-EGL39346.1;Parent=gene-HMPREF1039_0861;Dbxref=NCBI_GP:EGL39346.1;Name=EGL39346.1;Note=identified by match to protein family HMM PF05658;gbkey=CDS;locus_tag=HMPREF1039_0861;product=Hep/Hag repeat protein;protein_id=EGL39346.1;transl_table=11
AFIJ01000038.1	Genbank	gene	5185	6192	.	-	.	ID=gene-HMPREF1039_0862;Name=HMPREF1039_0862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0862
AFIJ01000038.1	Genbank	CDS	5185	6192	.	-	0	ID=cds-EGL39428.1;Parent=gene-HMPREF1039_0862;Dbxref=NCBI_GP:EGL39428.1;Name=EGL39428.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF05658;gbkey=CDS;locus_tag=HMPREF1039_0862;product=Hep/Hag repeat protein;protein_id=EGL39428.1;transl_table=11
AFIJ01000038.1	Genbank	gene	6366	7337	.	-	.	ID=gene-HMPREF1039_0863;Name=HMPREF1039_0863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0863
AFIJ01000038.1	Genbank	CDS	6366	7337	.	-	0	ID=cds-EGL39369.1;Parent=gene-HMPREF1039_0863;Dbxref=NCBI_GP:EGL39369.1;Name=EGL39369.1;Note=identified by match to protein family HMM PF00877%3B match to protein family HMM PF01471;gbkey=CDS;locus_tag=HMPREF1039_0863;product=NlpC/P60 family protein;protein_id=EGL39369.1;transl_table=11
AFIJ01000038.1	Genbank	gene	7389	7559	.	-	.	ID=gene-HMPREF1039_0864;Name=HMPREF1039_0864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0864
AFIJ01000038.1	Genbank	CDS	7389	7559	.	-	0	ID=cds-EGL39415.1;Parent=gene-HMPREF1039_0864;Dbxref=NCBI_GP:EGL39415.1;Name=EGL39415.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0864;product=hypothetical protein;protein_id=EGL39415.1;transl_table=11
AFIJ01000038.1	Genbank	gene	7704	8522	.	+	.	ID=gene-HMPREF1039_0865;Name=HMPREF1039_0865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0865
AFIJ01000038.1	Genbank	CDS	7704	8522	.	+	0	ID=cds-EGL39439.1;Parent=gene-HMPREF1039_0865;Dbxref=NCBI_GP:EGL39439.1;Name=EGL39439.1;gbkey=CDS;locus_tag=HMPREF1039_0865;product=hypothetical protein;protein_id=EGL39439.1;transl_table=11
AFIJ01000038.1	Genbank	gene	8534	9649	.	+	.	ID=gene-HMPREF1039_0866;Name=HMPREF1039_0866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0866
AFIJ01000038.1	Genbank	CDS	8534	9649	.	+	0	ID=cds-EGL39420.1;Parent=gene-HMPREF1039_0866;Dbxref=NCBI_GP:EGL39420.1;Name=EGL39420.1;Note=identified by match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF1039_0866;product=ATPase family associated with various cellular activities (AAA);protein_id=EGL39420.1;transl_table=11
AFIJ01000038.1	Genbank	gene	9651	11042	.	+	.	ID=gene-HMPREF1039_0867;Name=HMPREF1039_0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0867
AFIJ01000038.1	Genbank	CDS	9651	11042	.	+	0	ID=cds-EGL39353.1;Parent=gene-HMPREF1039_0867;Dbxref=NCBI_GP:EGL39353.1;Name=EGL39353.1;gbkey=CDS;locus_tag=HMPREF1039_0867;product=hypothetical protein;protein_id=EGL39353.1;transl_table=11
AFIJ01000038.1	Genbank	gene	11083	12516	.	-	.	ID=gene-HMPREF1039_0868;Name=HMPREF1039_0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0868
AFIJ01000038.1	Genbank	CDS	11083	12516	.	-	0	ID=cds-EGL39432.1;Parent=gene-HMPREF1039_0868;Dbxref=NCBI_GP:EGL39432.1;Name=EGL39432.1;Note=identified by match to protein family HMM PF03553;gbkey=CDS;locus_tag=HMPREF1039_0868;product=Na+/H+ antiporter family protein;protein_id=EGL39432.1;transl_table=11
AFIJ01000038.1	Genbank	gene	12624	13391	.	-	.	ID=gene-HMPREF1039_0869;Name=HMPREF1039_0869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0869
AFIJ01000038.1	Genbank	CDS	12624	13391	.	-	0	ID=cds-EGL39424.1;Parent=gene-HMPREF1039_0869;Dbxref=NCBI_GP:EGL39424.1;Name=EGL39424.1;Note=identified by match to protein family HMM PF01026%3B match to protein family HMM TIGR00010;gbkey=CDS;locus_tag=HMPREF1039_0869;product=hydrolase%2C TatD family;protein_id=EGL39424.1;transl_table=11
AFIJ01000038.1	Genbank	gene	13393	15330	.	-	.	ID=gene-HMPREF1039_0870;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0870
AFIJ01000038.1	Genbank	CDS	13393	15330	.	-	0	ID=cds-EGL39409.1;Parent=gene-HMPREF1039_0870;Dbxref=NCBI_GP:EGL39409.1;Name=EGL39409.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00398%3B match to protein family HMM TIGR00399;gbkey=CDS;gene=metG;locus_tag=HMPREF1039_0870;product=methionine--tRNA ligase;protein_id=EGL39409.1;transl_table=11
AFIJ01000038.1	Genbank	gene	15371	16213	.	-	.	ID=gene-HMPREF1039_0871;Name=HMPREF1039_0871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0871
AFIJ01000038.1	Genbank	CDS	15371	16213	.	-	0	ID=cds-EGL39414.1;Parent=gene-HMPREF1039_0871;Dbxref=NCBI_GP:EGL39414.1;Name=EGL39414.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR00096;gbkey=CDS;locus_tag=HMPREF1039_0871;product=S-adenosylmethionine-dependent methyltransferase%2C YraL family;protein_id=EGL39414.1;transl_table=11
AFIJ01000038.1	Genbank	gene	16197	16955	.	-	.	ID=gene-HMPREF1039_0872;Name=HMPREF1039_0872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0872
AFIJ01000038.1	Genbank	CDS	16197	16955	.	-	0	ID=cds-EGL39392.1;Parent=gene-HMPREF1039_0872;Dbxref=NCBI_GP:EGL39392.1;Name=EGL39392.1;Note=identified by match to protein family HMM PF05175;gbkey=CDS;locus_tag=HMPREF1039_0872;product=methyltransferase small domain protein;protein_id=EGL39392.1;transl_table=11
AFIJ01000038.1	Genbank	gene	16945	17787	.	-	.	ID=gene-HMPREF1039_0873;Name=HMPREF1039_0873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0873
AFIJ01000038.1	Genbank	CDS	16945	17787	.	-	0	ID=cds-EGL39406.1;Parent=gene-HMPREF1039_0873;Dbxref=NCBI_GP:EGL39406.1;Name=EGL39406.1;Note=identified by match to protein family HMM PF04468;gbkey=CDS;locus_tag=HMPREF1039_0873;product=PSP1 C-terminal domain protein;protein_id=EGL39406.1;transl_table=11
AFIJ01000038.1	Genbank	gene	17788	18780	.	-	.	ID=gene-HMPREF1039_0874;Name=HMPREF1039_0874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0874
AFIJ01000038.1	Genbank	CDS	17788	18780	.	-	0	ID=cds-EGL39383.1;Parent=gene-HMPREF1039_0874;Dbxref=NCBI_GP:EGL39383.1;Name=EGL39383.1;gbkey=CDS;locus_tag=HMPREF1039_0874;product=putative DNA polymerase III%2C delta' subunit;protein_id=EGL39383.1;transl_table=11
AFIJ01000038.1	Genbank	gene	18921	19619	.	-	.	ID=gene-HMPREF1039_0875;Name=HMPREF1039_0875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0875
AFIJ01000038.1	Genbank	CDS	18921	19619	.	-	0	ID=cds-EGL39391.1;Parent=gene-HMPREF1039_0875;Dbxref=NCBI_GP:EGL39391.1;Name=EGL39391.1;Note=identified by match to protein family HMM PF02223;gbkey=CDS;locus_tag=HMPREF1039_0875;product=dTMP kinase;protein_id=EGL39391.1;transl_table=11
AFIJ01000038.1	Genbank	gene	19624	21078	.	-	.	ID=gene-HMPREF1039_0876;Name=HMPREF1039_0876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0876
AFIJ01000038.1	Genbank	CDS	19624	21078	.	-	0	ID=cds-EGL39421.1;Parent=gene-HMPREF1039_0876;Dbxref=NCBI_GP:EGL39421.1;Name=EGL39421.1;Note=identified by match to protein family HMM PF01276%3B match to protein family HMM PF03711;gbkey=CDS;locus_tag=HMPREF1039_0876;product=Orn/Lys/Arg decarboxylase%2C major domain protein;protein_id=EGL39421.1;transl_table=11
AFIJ01000038.1	Genbank	gene	21267	21389	.	-	.	ID=gene-HMPREF1039_0877;Name=HMPREF1039_0877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0877
AFIJ01000038.1	Genbank	CDS	21267	21389	.	-	0	ID=cds-EGL39399.1;Parent=gene-HMPREF1039_0877;Dbxref=NCBI_GP:EGL39399.1;Name=EGL39399.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0877;product=hypothetical protein;protein_id=EGL39399.1;transl_table=11
AFIJ01000038.1	Genbank	gene	21575	22420	.	+	.	ID=gene-HMPREF1039_0878;Name=HMPREF1039_0878;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0878
AFIJ01000038.1	Genbank	CDS	21575	22420	.	+	0	ID=cds-EGL39381.1;Parent=gene-HMPREF1039_0878;Dbxref=NCBI_GP:EGL39381.1;Name=EGL39381.1;Note=identified by match to protein family HMM PF08543;gbkey=CDS;locus_tag=HMPREF1039_0878;product=pyridoxal kinase;protein_id=EGL39381.1;transl_table=11
AFIJ01000038.1	Genbank	gene	22480	22926	.	-	.	ID=gene-HMPREF1039_0879;Name=HMPREF1039_0879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0879
AFIJ01000038.1	Genbank	CDS	22480	22926	.	-	0	ID=cds-EGL39384.1;Parent=gene-HMPREF1039_0879;Dbxref=NCBI_GP:EGL39384.1;Name=EGL39384.1;Note=identified by match to protein family HMM PF04138;gbkey=CDS;locus_tag=HMPREF1039_0879;product=GtrA-like protein;protein_id=EGL39384.1;transl_table=11
AFIJ01000038.1	Genbank	gene	23102	23536	.	+	.	ID=gene-HMPREF1039_0880;Name=HMPREF1039_0880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0880
AFIJ01000038.1	Genbank	CDS	23102	23536	.	+	0	ID=cds-EGL39398.1;Parent=gene-HMPREF1039_0880;Dbxref=NCBI_GP:EGL39398.1;Name=EGL39398.1;Note=identified by match to protein family HMM PF01047%3B match to protein family HMM PF01978;gbkey=CDS;locus_tag=HMPREF1039_0880;product=transcriptional regulator%2C MarR family;protein_id=EGL39398.1;transl_table=11
AFIJ01000038.1	Genbank	gene	23590	24729	.	-	.	ID=gene-HMPREF1039_0881;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0881
AFIJ01000038.1	Genbank	CDS	23590	24729	.	-	0	ID=cds-EGL39407.1;Parent=gene-HMPREF1039_0881;Dbxref=NCBI_GP:EGL39407.1;Name=EGL39407.1;Note=identified by match to protein family HMM PF01986%3B match to protein family HMM PF03749%3B match to protein family HMM TIGR00230;gbkey=CDS;gene=sfsA;locus_tag=HMPREF1039_0881;product=sugar fermentation stimulation protein;protein_id=EGL39407.1;transl_table=11
AFIJ01000038.1	Genbank	gene	25217	25351	.	-	.	ID=gene-HMPREF1039_0882;Name=HMPREF1039_0882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0882
AFIJ01000038.1	Genbank	CDS	25217	25351	.	-	0	ID=cds-EGL39443.1;Parent=gene-HMPREF1039_0882;Dbxref=NCBI_GP:EGL39443.1;Name=EGL39443.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0882;product=hypothetical protein;protein_id=EGL39443.1;transl_table=11
AFIJ01000038.1	Genbank	gene	25563	26204	.	-	.	ID=gene-HMPREF1039_0883;Name=HMPREF1039_0883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0883
AFIJ01000038.1	Genbank	CDS	25563	26204	.	-	0	ID=cds-EGL39395.1;Parent=gene-HMPREF1039_0883;Dbxref=NCBI_GP:EGL39395.1;Name=EGL39395.1;gbkey=CDS;locus_tag=HMPREF1039_0883;product=hypothetical protein;protein_id=EGL39395.1;transl_table=11
AFIJ01000038.1	Genbank	gene	26225	26791	.	-	.	ID=gene-HMPREF1039_0884;Name=HMPREF1039_0884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0884
AFIJ01000038.1	Genbank	CDS	26225	26791	.	-	0	ID=cds-EGL39397.1;Parent=gene-HMPREF1039_0884;Dbxref=NCBI_GP:EGL39397.1;Name=EGL39397.1;Note=identified by match to protein family HMM PF06810;gbkey=CDS;locus_tag=HMPREF1039_0884;product=phage minor structural protein GP20;protein_id=EGL39397.1;transl_table=11
AFIJ01000038.1	Genbank	gene	26931	27131	.	-	.	ID=gene-HMPREF1039_0885;Name=HMPREF1039_0885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0885
AFIJ01000038.1	Genbank	CDS	26931	27131	.	-	0	ID=cds-EGL39347.1;Parent=gene-HMPREF1039_0885;Dbxref=NCBI_GP:EGL39347.1;Name=EGL39347.1;gbkey=CDS;locus_tag=HMPREF1039_0885;product=hypothetical protein;protein_id=EGL39347.1;transl_table=11
AFIJ01000038.1	Genbank	gene	27133	28152	.	-	.	ID=gene-HMPREF1039_0886;Name=HMPREF1039_0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0886
AFIJ01000038.1	Genbank	CDS	27133	28152	.	-	0	ID=cds-EGL39363.1;Parent=gene-HMPREF1039_0886;Dbxref=NCBI_GP:EGL39363.1;Name=EGL39363.1;Note=identified by match to protein family HMM PF04233%3B match to protein family HMM TIGR01641;gbkey=CDS;locus_tag=HMPREF1039_0886;product=phage protein F-like protein;protein_id=EGL39363.1;transl_table=11
AFIJ01000038.1	Genbank	gene	28177	28602	.	-	.	ID=gene-HMPREF1039_0887;Name=HMPREF1039_0887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0887
AFIJ01000038.1	Genbank	CDS	28177	28602	.	-	0	ID=cds-EGL39349.1;Parent=gene-HMPREF1039_0887;Dbxref=NCBI_GP:EGL39349.1;Name=EGL39349.1;gbkey=CDS;locus_tag=HMPREF1039_0887;product=hypothetical protein;protein_id=EGL39349.1;transl_table=11
AFIJ01000038.1	Genbank	gene	28731	31184	.	-	.	ID=gene-HMPREF1039_0888;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0888
AFIJ01000038.1	Genbank	CDS	28731	31184	.	-	0	ID=cds-EGL39362.1;Parent=gene-HMPREF1039_0888;Dbxref=NCBI_GP:EGL39362.1;Name=EGL39362.1;Note=identified by match to protein family HMM PF00521%3B match to protein family HMM PF03989%3B match to protein family HMM TIGR01063;gbkey=CDS;gene=gyrA;locus_tag=HMPREF1039_0888;product=DNA gyrase%2C A subunit;protein_id=EGL39362.1;transl_table=11
AFIJ01000038.1	Genbank	gene	31456	32178	.	+	.	ID=gene-HMPREF1039_0889;Name=HMPREF1039_0889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0889
AFIJ01000038.1	Genbank	CDS	31456	32178	.	+	0	ID=cds-EGL39417.1;Parent=gene-HMPREF1039_0889;Dbxref=NCBI_GP:EGL39417.1;Name=EGL39417.1;Note=identified by match to protein family HMM PF03009;gbkey=CDS;locus_tag=HMPREF1039_0889;product=glycerophosphodiester phosphodiesterase family protein;protein_id=EGL39417.1;transl_table=11
AFIJ01000038.1	Genbank	gene	32184	33548	.	+	.	ID=gene-HMPREF1039_0890;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0890
AFIJ01000038.1	Genbank	CDS	32184	33548	.	+	0	ID=cds-EGL39368.1;Parent=gene-HMPREF1039_0890;Dbxref=NCBI_GP:EGL39368.1;Name=EGL39368.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF1039_0890;product=amino acid carrier protein;protein_id=EGL39368.1;transl_table=11
AFIJ01000038.1	Genbank	gene	33669	34100	.	+	.	ID=gene-HMPREF1039_0891;Name=HMPREF1039_0891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0891
AFIJ01000038.1	Genbank	CDS	33669	34100	.	+	0	ID=cds-EGL39387.1;Parent=gene-HMPREF1039_0891;Dbxref=NCBI_GP:EGL39387.1;Name=EGL39387.1;Note=identified by match to protein family HMM PF04304;gbkey=CDS;locus_tag=HMPREF1039_0891;product=hypothetical protein;protein_id=EGL39387.1;transl_table=11
AFIJ01000038.1	Genbank	gene	34194	35648	.	-	.	ID=gene-HMPREF1039_0892;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0892
AFIJ01000038.1	Genbank	CDS	34194	35648	.	-	0	ID=cds-EGL39394.1;Parent=gene-HMPREF1039_0892;Dbxref=NCBI_GP:EGL39394.1;Name=EGL39394.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM PF07687%3B match to protein family HMM TIGR01893;gbkey=CDS;gene=pepD;locus_tag=HMPREF1039_0892;product=Xaa-His dipeptidase;protein_id=EGL39394.1;transl_table=11
AFIJ01000038.1	Genbank	gene	35915	37987	.	+	.	ID=gene-HMPREF1039_0893;Name=HMPREF1039_0893;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0893
AFIJ01000038.1	Genbank	CDS	35915	37987	.	+	0	ID=cds-EGL39423.1;Parent=gene-HMPREF1039_0893;Dbxref=NCBI_GP:EGL39423.1;Name=EGL39423.1;Note=identified by match to protein family HMM PF03169%3B match to protein family HMM TIGR00728%3B match to protein family HMM TIGR00733;gbkey=CDS;locus_tag=HMPREF1039_0893;product=oligopeptide transporter%2C OPT family;protein_id=EGL39423.1;transl_table=11
AFIJ01000038.1	Genbank	gene	38215	39042	.	+	.	ID=gene-HMPREF1039_0894;Name=HMPREF1039_0894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0894
AFIJ01000038.1	Genbank	CDS	38215	39042	.	+	0	ID=cds-EGL39437.1;Parent=gene-HMPREF1039_0894;Dbxref=NCBI_GP:EGL39437.1;Name=EGL39437.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF1039_0894;product=4Fe-4S binding domain protein;protein_id=EGL39437.1;transl_table=11
AFIJ01000038.1	Genbank	gene	39412	40017	.	-	.	ID=gene-HMPREF1039_0895;Name=HMPREF1039_0895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0895
AFIJ01000038.1	Genbank	CDS	39412	40017	.	-	0	ID=cds-EGL39429.1;Parent=gene-HMPREF1039_0895;Dbxref=NCBI_GP:EGL39429.1;Name=EGL39429.1;Note=identified by match to protein family HMM PF01569;gbkey=CDS;locus_tag=HMPREF1039_0895;product=PAP2 family protein;protein_id=EGL39429.1;transl_table=11
AFIJ01000038.1	Genbank	gene	40084	41019	.	+	.	ID=gene-HMPREF1039_0896;Name=HMPREF1039_0896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0896
AFIJ01000038.1	Genbank	CDS	40084	41019	.	+	0	ID=cds-EGL39422.1;Parent=gene-HMPREF1039_0896;Dbxref=NCBI_GP:EGL39422.1;Name=EGL39422.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF1039_0896;product=putative glutamine ABC transporter periplasmic protein;protein_id=EGL39422.1;transl_table=11
AFIJ01000038.1	Genbank	gene	41137	41817	.	+	.	ID=gene-HMPREF1039_0897;Name=HMPREF1039_0897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0897
AFIJ01000038.1	Genbank	CDS	41137	41817	.	+	0	ID=cds-EGL39365.1;Parent=gene-HMPREF1039_0897;Dbxref=NCBI_GP:EGL39365.1;Name=EGL39365.1;Note=identified by match to protein family HMM PF06508%3B match to protein family HMM TIGR00364;gbkey=CDS;locus_tag=HMPREF1039_0897;product=protein ExsB;protein_id=EGL39365.1;transl_table=11
AFIJ01000038.1	Genbank	gene	41986	43731	.	+	.	ID=gene-HMPREF1039_0898;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=HMPREF1039_0898
AFIJ01000038.1	Genbank	CDS	41986	43731	.	+	0	ID=cds-EGL39442.1;Parent=gene-HMPREF1039_0898;Dbxref=NCBI_GP:EGL39442.1;Name=EGL39442.1;Note=identified by match to protein family HMM PF00224%3B match to protein family HMM PF00391%3B match to protein family HMM PF02887%3B match to protein family HMM TIGR01064;gbkey=CDS;gene=pyk;locus_tag=HMPREF1039_0898;product=pyruvate kinase;protein_id=EGL39442.1;transl_table=11
AFIJ01000038.1	Genbank	gene	43790	45859	.	-	.	ID=gene-HMPREF1039_0899;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0899
AFIJ01000038.1	Genbank	CDS	43790	45859	.	-	0	ID=cds-EGL39410.1;Parent=gene-HMPREF1039_0899;Dbxref=NCBI_GP:EGL39410.1;Name=EGL39410.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00484;gbkey=CDS;gene=fusA;locus_tag=HMPREF1039_0899;product=translation elongation factor G;protein_id=EGL39410.1;transl_table=11
AFIJ01000038.1	Genbank	gene	45885	46019	.	-	.	ID=gene-HMPREF1039_0900;Name=HMPREF1039_0900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0900
AFIJ01000038.1	Genbank	CDS	45885	46019	.	-	0	ID=cds-EGL39441.1;Parent=gene-HMPREF1039_0900;Dbxref=NCBI_GP:EGL39441.1;Name=EGL39441.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0900;product=hypothetical protein;protein_id=EGL39441.1;transl_table=11
AFIJ01000038.1	Genbank	gene	45991	46161	.	-	.	ID=gene-HMPREF1039_0901;Name=HMPREF1039_0901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0901
AFIJ01000038.1	Genbank	CDS	45991	46161	.	-	0	ID=cds-EGL39374.1;Parent=gene-HMPREF1039_0901;Dbxref=NCBI_GP:EGL39374.1;Name=EGL39374.1;gbkey=CDS;locus_tag=HMPREF1039_0901;product=hypothetical protein;protein_id=EGL39374.1;transl_table=11
AFIJ01000038.1	Genbank	gene	46229	47848	.	+	.	ID=gene-HMPREF1039_0902;Name=HMPREF1039_0902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0902
AFIJ01000038.1	Genbank	CDS	46229	47848	.	+	0	ID=cds-EGL39356.1;Parent=gene-HMPREF1039_0902;Dbxref=NCBI_GP:EGL39356.1;Name=EGL39356.1;Note=identified by match to protein family HMM PF01555;gbkey=CDS;locus_tag=HMPREF1039_0902;product=DNA (cytosine-5-)-methyltransferase;protein_id=EGL39356.1;transl_table=11
AFIJ01000038.1	Genbank	gene	47842	50055	.	+	.	ID=gene-HMPREF1039_0903;Name=HMPREF1039_0903;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0903
AFIJ01000038.1	Genbank	CDS	47842	50055	.	+	0	ID=cds-EGL39404.1;Parent=gene-HMPREF1039_0903;Dbxref=NCBI_GP:EGL39404.1;Name=EGL39404.1;Note=identified by match to protein family HMM PF04851;gbkey=CDS;locus_tag=HMPREF1039_0903;product=type III restriction enzyme%2C res subunit;protein_id=EGL39404.1;transl_table=11
AFIJ01000038.1	Genbank	gene	50386	51753	.	+	.	ID=gene-HMPREF1039_0904;Name=HMPREF1039_0904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0904
AFIJ01000038.1	Genbank	CDS	50386	51753	.	+	0	ID=cds-EGL39433.1;Parent=gene-HMPREF1039_0904;Dbxref=NCBI_GP:EGL39433.1;Name=EGL39433.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;locus_tag=HMPREF1039_0904;product=aminopeptidase I zinc metalloprotease (M18);protein_id=EGL39433.1;transl_table=11
AFIJ01000038.1	Genbank	gene	51721	51855	.	-	.	ID=gene-HMPREF1039_0905;Name=HMPREF1039_0905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0905
AFIJ01000038.1	Genbank	CDS	51721	51855	.	-	0	ID=cds-EGL39377.1;Parent=gene-HMPREF1039_0905;Dbxref=NCBI_GP:EGL39377.1;Name=EGL39377.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0905;product=hypothetical protein;protein_id=EGL39377.1;transl_table=11
AFIJ01000038.1	Genbank	gene	51920	52810	.	+	.	ID=gene-HMPREF1039_0906;Name=HMPREF1039_0906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0906
AFIJ01000038.1	Genbank	CDS	51920	52810	.	+	0	ID=cds-EGL39371.1;Parent=gene-HMPREF1039_0906;Dbxref=NCBI_GP:EGL39371.1;Name=EGL39371.1;Note=identified by match to protein family HMM PF00781%3B match to protein family HMM TIGR00147;gbkey=CDS;locus_tag=HMPREF1039_0906;product=lipid kinase%2C YegS/Rv2252/BmrU family;protein_id=EGL39371.1;transl_table=11
AFIJ01000038.1	Genbank	gene	52877	54151	.	-	.	ID=gene-HMPREF1039_0907;Name=gntT;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=HMPREF1039_0907
AFIJ01000038.1	Genbank	CDS	52877	54151	.	-	0	ID=cds-EGL39370.1;Parent=gene-HMPREF1039_0907;Dbxref=NCBI_GP:EGL39370.1;Name=EGL39370.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02447%3B match to protein family HMM PF03600%3B match to protein family HMM TIGR00791;gbkey=CDS;gene=gntT;locus_tag=HMPREF1039_0907;product=transporter%2C gluconate:H+ symporter family;protein_id=EGL39370.1;transl_table=11
AFIJ01000038.1	Genbank	gene	54460	55362	.	+	.	ID=gene-HMPREF1039_0908;Name=HMPREF1039_0908;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0908
AFIJ01000038.1	Genbank	CDS	54460	55362	.	+	0	ID=cds-EGL39438.1;Parent=gene-HMPREF1039_0908;Dbxref=NCBI_GP:EGL39438.1;Name=EGL39438.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF1039_0908;product=radical SAM domain protein;protein_id=EGL39438.1;transl_table=11
AFIJ01000038.1	Genbank	gene	55451	56383	.	-	.	ID=gene-HMPREF1039_0909;Name=HMPREF1039_0909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0909
AFIJ01000038.1	Genbank	CDS	55451	56383	.	-	0	ID=cds-EGL39386.1;Parent=gene-HMPREF1039_0909;Dbxref=NCBI_GP:EGL39386.1;Name=EGL39386.1;Note=identified by match to protein family HMM PF03547;gbkey=CDS;locus_tag=HMPREF1039_0909;product=transporter%2C auxin efflux carrier (AEC) family protein;protein_id=EGL39386.1;transl_table=11
AFIJ01000038.1	Genbank	gene	56414	57391	.	-	.	ID=gene-HMPREF1039_0910;Name=HMPREF1039_0910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0910
AFIJ01000038.1	Genbank	CDS	56414	57391	.	-	0	ID=cds-EGL39445.1;Parent=gene-HMPREF1039_0910;Dbxref=NCBI_GP:EGL39445.1;Name=EGL39445.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF1039_0910;product=metallo-beta-lactamase domain protein;protein_id=EGL39445.1;transl_table=11
AFIJ01000038.1	Genbank	gene	57504	58076	.	-	.	ID=gene-HMPREF1039_0911;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=HMPREF1039_0911
AFIJ01000038.1	Genbank	CDS	57504	58076	.	-	0	ID=cds-EGL39430.1;Parent=gene-HMPREF1039_0911;Dbxref=NCBI_GP:EGL39430.1;Name=EGL39430.1;Note=identified by match to protein family HMM PF01195%3B match to protein family HMM TIGR00447;gbkey=CDS;gene=pth;locus_tag=HMPREF1039_0911;product=aminoacyl-tRNA hydrolase;protein_id=EGL39430.1;transl_table=11
AFIJ01000038.1	Genbank	gene	58089	59054	.	-	.	ID=gene-HMPREF1039_0912;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=HMPREF1039_0912
AFIJ01000038.1	Genbank	CDS	58089	59054	.	-	0	ID=cds-EGL39379.1;Parent=gene-HMPREF1039_0912;Dbxref=NCBI_GP:EGL39379.1;Name=EGL39379.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01251;gbkey=CDS;gene=prs;locus_tag=HMPREF1039_0912;product=ribose-phosphate diphosphokinase;protein_id=EGL39379.1;transl_table=11
AFIJ01000038.1	Genbank	gene	59129	60502	.	-	.	ID=gene-HMPREF1039_0913;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF1039_0913
AFIJ01000038.1	Genbank	CDS	59129	60502	.	-	0	ID=cds-EGL39434.1;Parent=gene-HMPREF1039_0913;Dbxref=NCBI_GP:EGL39434.1;Name=EGL39434.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM PF00483%3B match to protein family HMM PF01128%3B match to protein family HMM TIGR01173;gbkey=CDS;gene=glmU;locus_tag=HMPREF1039_0913;product=UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;protein_id=EGL39434.1;transl_table=11
AFIJ01000038.1	Genbank	gene	60540	60653	.	-	.	ID=gene-HMPREF1039_0914;Name=HMPREF1039_0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0914
AFIJ01000038.1	Genbank	CDS	60540	60653	.	-	0	ID=cds-EGL39408.1;Parent=gene-HMPREF1039_0914;Dbxref=NCBI_GP:EGL39408.1;Name=EGL39408.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0914;product=hypothetical protein;protein_id=EGL39408.1;transl_table=11
AFIJ01000038.1	Genbank	gene	60672	61226	.	-	.	ID=gene-HMPREF1039_0915;Name=HMPREF1039_0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0915
AFIJ01000038.1	Genbank	CDS	60672	61226	.	-	0	ID=cds-EGL39435.1;Parent=gene-HMPREF1039_0915;Dbxref=NCBI_GP:EGL39435.1;Name=EGL39435.1;Note=identified by match to protein family HMM PF01471%3B match to protein family HMM PF06725;gbkey=CDS;locus_tag=HMPREF1039_0915;product=3D domain protein;protein_id=EGL39435.1;transl_table=11
AFIJ01000038.1	Genbank	gene	61485	63068	.	-	.	ID=gene-HMPREF1039_0916;Name=HMPREF1039_0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0916
AFIJ01000038.1	Genbank	CDS	61485	63068	.	-	0	ID=cds-EGL39440.1;Parent=gene-HMPREF1039_0916;Dbxref=NCBI_GP:EGL39440.1;Name=EGL39440.1;Note=identified by match to protein family HMM PF00654%3B match to protein family HMM PF02080;gbkey=CDS;locus_tag=HMPREF1039_0916;product=chloride transporter%2C ClC family;protein_id=EGL39440.1;transl_table=11
AFIJ01000038.1	Genbank	gene	63222	64412	.	+	.	ID=gene-HMPREF1039_0917;Name=HMPREF1039_0917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0917
AFIJ01000038.1	Genbank	CDS	63222	64412	.	+	0	ID=cds-EGL39364.1;Parent=gene-HMPREF1039_0917;Dbxref=NCBI_GP:EGL39364.1;Name=EGL39364.1;Note=identified by match to protein family HMM PF01546%3B match to protein family HMM TIGR01891;gbkey=CDS;locus_tag=HMPREF1039_0917;product=amidohydrolase;protein_id=EGL39364.1;transl_table=11
AFIJ01000038.1	Genbank	gene	64429	64674	.	+	.	ID=gene-HMPREF1039_0918;Name=HMPREF1039_0918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0918
AFIJ01000038.1	Genbank	CDS	64429	64674	.	+	0	ID=cds-EGL39375.1;Parent=gene-HMPREF1039_0918;Dbxref=NCBI_GP:EGL39375.1;Name=EGL39375.1;gbkey=CDS;locus_tag=HMPREF1039_0918;product=hypothetical protein;protein_id=EGL39375.1;transl_table=11
AFIJ01000038.1	Genbank	gene	64653	65255	.	-	.	ID=gene-HMPREF1039_0919;Name=HMPREF1039_0919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0919
AFIJ01000038.1	Genbank	CDS	64653	65255	.	-	0	ID=cds-EGL39425.1;Parent=gene-HMPREF1039_0919;Dbxref=NCBI_GP:EGL39425.1;Name=EGL39425.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0919;product=hypothetical protein;protein_id=EGL39425.1;transl_table=11
AFIJ01000038.1	Genbank	gene	65997	67634	.	-	.	ID=gene-HMPREF1039_0920;Name=HMPREF1039_0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0920
AFIJ01000038.1	Genbank	CDS	65997	67634	.	-	0	ID=cds-EGL39388.1;Parent=gene-HMPREF1039_0920;Dbxref=NCBI_GP:EGL39388.1;Name=EGL39388.1;gbkey=CDS;locus_tag=HMPREF1039_0920;product=hypothetical protein;protein_id=EGL39388.1;transl_table=11
AFIJ01000038.1	Genbank	gene	67640	68905	.	-	.	ID=gene-HMPREF1039_0921;Name=HMPREF1039_0921;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0921
AFIJ01000038.1	Genbank	CDS	67640	68905	.	-	0	ID=cds-EGL39351.1;Parent=gene-HMPREF1039_0921;Dbxref=NCBI_GP:EGL39351.1;Name=EGL39351.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF1039_0921;product=Ser/Thr phosphatase family protein;protein_id=EGL39351.1;transl_table=11
AFIJ01000038.1	Genbank	gene	68898	70301	.	-	.	ID=gene-HMPREF1039_0922;Name=HMPREF1039_0922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0922
AFIJ01000038.1	Genbank	CDS	68898	70301	.	-	0	ID=cds-EGL39382.1;Parent=gene-HMPREF1039_0922;Dbxref=NCBI_GP:EGL39382.1;Name=EGL39382.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00392;gbkey=CDS;locus_tag=HMPREF1039_0922;product=transcriptional regulator%2C GntR family;protein_id=EGL39382.1;transl_table=11
AFIJ01000038.1	Genbank	gene	70492	71484	.	+	.	ID=gene-HMPREF1039_0923;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0923
AFIJ01000038.1	Genbank	CDS	70492	71484	.	+	0	ID=cds-EGL39376.1;Parent=gene-HMPREF1039_0923;Dbxref=NCBI_GP:EGL39376.1;Name=EGL39376.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR00433;gbkey=CDS;gene=bioB;locus_tag=HMPREF1039_0923;product=biotin synthase;protein_id=EGL39376.1;transl_table=11
AFIJ01000038.1	Genbank	gene	71469	72860	.	-	.	ID=gene-HMPREF1039_0924;Name=HMPREF1039_0924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0924
AFIJ01000038.1	Genbank	CDS	71469	72860	.	-	0	ID=cds-EGL39403.1;Parent=gene-HMPREF1039_0924;Dbxref=NCBI_GP:EGL39403.1;Name=EGL39403.1;Note=identified by match to protein family HMM PF00349%3B match to protein family HMM PF03727;gbkey=CDS;locus_tag=HMPREF1039_0924;product=Hexokinase;protein_id=EGL39403.1;transl_table=11
AFIJ01000038.1	Genbank	gene	73027	73221	.	+	.	ID=gene-HMPREF1039_0925;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0925
AFIJ01000038.1	Genbank	CDS	73027	73221	.	+	0	ID=cds-EGL39412.1;Parent=gene-HMPREF1039_0925;Dbxref=NCBI_GP:EGL39412.1;Name=EGL39412.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02597%3B match to protein family HMM TIGR01683;gbkey=CDS;gene=thiS;locus_tag=HMPREF1039_0925;product=thiamine biosynthesis protein ThiS;protein_id=EGL39412.1;transl_table=11
AFIJ01000038.1	Genbank	gene	73275	74045	.	+	.	ID=gene-HMPREF1039_0926;Name=thiG;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0926
AFIJ01000038.1	Genbank	CDS	73275	74045	.	+	0	ID=cds-EGL39419.1;Parent=gene-HMPREF1039_0926;Dbxref=NCBI_GP:EGL39419.1;Name=EGL39419.1;Note=identified by match to protein family HMM PF05690;gbkey=CDS;gene=thiG;locus_tag=HMPREF1039_0926;product=thiazole biosynthesis protein ThiG;protein_id=EGL39419.1;transl_table=11
AFIJ01000038.1	Genbank	gene	74060	75223	.	+	.	ID=gene-HMPREF1039_0927;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0927
AFIJ01000038.1	Genbank	CDS	74060	75223	.	+	0	ID=cds-EGL39416.1;Parent=gene-HMPREF1039_0927;Dbxref=NCBI_GP:EGL39416.1;Name=EGL39416.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06968%3B match to protein family HMM TIGR02351;gbkey=CDS;gene=thiH;locus_tag=HMPREF1039_0927;product=thiazole biosynthesis protein ThiH;protein_id=EGL39416.1;transl_table=11
AFIJ01000038.1	Genbank	gene	75231	75344	.	+	.	ID=gene-HMPREF1039_0928;Name=HMPREF1039_0928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0928
AFIJ01000038.1	Genbank	CDS	75231	75344	.	+	0	ID=cds-EGL39360.1;Parent=gene-HMPREF1039_0928;Dbxref=NCBI_GP:EGL39360.1;Name=EGL39360.1;gbkey=CDS;locus_tag=HMPREF1039_0928;product=hypothetical protein;protein_id=EGL39360.1;transl_table=11
AFIJ01000038.1	Genbank	gene	75463	76071	.	+	.	ID=gene-HMPREF1039_0929;Name=HMPREF1039_0929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0929
AFIJ01000038.1	Genbank	CDS	75463	76071	.	+	0	ID=cds-EGL39378.1;Parent=gene-HMPREF1039_0929;Dbxref=NCBI_GP:EGL39378.1;Name=EGL39378.1;Note=identified by match to protein family HMM PF02581;gbkey=CDS;locus_tag=HMPREF1039_0929;product=putative thiamine-phosphate diphosphorylase;protein_id=EGL39378.1;transl_table=11
AFIJ01000038.1	Genbank	gene	76074	76577	.	+	.	ID=gene-HMPREF1039_0930;Name=HMPREF1039_0930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0930
AFIJ01000038.1	Genbank	CDS	76074	76577	.	+	0	ID=cds-EGL39380.1;Parent=gene-HMPREF1039_0930;Dbxref=NCBI_GP:EGL39380.1;Name=EGL39380.1;gbkey=CDS;locus_tag=HMPREF1039_0930;product=hypothetical protein;protein_id=EGL39380.1;transl_table=11
AFIJ01000038.1	Genbank	gene	76624	77223	.	-	.	ID=gene-HMPREF1039_0931;Name=HMPREF1039_0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0931
AFIJ01000038.1	Genbank	CDS	76624	77223	.	-	0	ID=cds-EGL39400.1;Parent=gene-HMPREF1039_0931;Dbxref=NCBI_GP:EGL39400.1;Name=EGL39400.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0931;product=hypothetical protein;protein_id=EGL39400.1;transl_table=11
AFIJ01000038.1	Genbank	gene	77238	78677	.	-	.	ID=gene-HMPREF1039_0932;Name=HMPREF1039_0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0932
AFIJ01000038.1	Genbank	CDS	77238	78677	.	-	0	ID=cds-EGL39402.1;Parent=gene-HMPREF1039_0932;Dbxref=NCBI_GP:EGL39402.1;Name=EGL39402.1;gbkey=CDS;locus_tag=HMPREF1039_0932;product=hypothetical protein;protein_id=EGL39402.1;transl_table=11
AFIJ01000038.1	Genbank	gene	78740	80044	.	-	.	ID=gene-HMPREF1039_0933;Name=cat;gbkey=Gene;gene=cat;gene_biotype=protein_coding;locus_tag=HMPREF1039_0933
AFIJ01000038.1	Genbank	CDS	78740	80044	.	-	0	ID=cds-EGL39418.1;Parent=gene-HMPREF1039_0933;Dbxref=NCBI_GP:EGL39418.1;Name=EGL39418.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;gene=cat;locus_tag=HMPREF1039_0933;product=4-hydroxybutyrate coenzyme A transferase;protein_id=EGL39418.1;transl_table=11
AFIJ01000038.1	Genbank	gene	80136	81587	.	-	.	ID=gene-HMPREF1039_0934;Name=abfD;gbkey=Gene;gene=abfD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0934
AFIJ01000038.1	Genbank	CDS	80136	81587	.	-	0	ID=cds-EGL39354.1;Parent=gene-HMPREF1039_0934;Dbxref=NCBI_GP:EGL39354.1;Name=EGL39354.1;Note=identified by match to protein family HMM PF03241;gbkey=CDS;gene=abfD;locus_tag=HMPREF1039_0934;product=4-hydroxyphenylacetate 3-hydroxylase family protein;protein_id=EGL39354.1;transl_table=11
AFIJ01000038.1	Genbank	gene	81679	81837	.	-	.	ID=gene-HMPREF1039_0935;Name=HMPREF1039_0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0935
AFIJ01000038.1	Genbank	CDS	81679	81837	.	-	0	ID=cds-EGL39361.1;Parent=gene-HMPREF1039_0935;Dbxref=NCBI_GP:EGL39361.1;Name=EGL39361.1;gbkey=CDS;locus_tag=HMPREF1039_0935;product=hypothetical protein;protein_id=EGL39361.1;transl_table=11
AFIJ01000038.1	Genbank	gene	81996	82280	.	+	.	ID=gene-HMPREF1039_0936;Name=HMPREF1039_0936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0936
AFIJ01000038.1	Genbank	CDS	81996	82280	.	+	0	ID=cds-EGL39385.1;Parent=gene-HMPREF1039_0936;Dbxref=NCBI_GP:EGL39385.1;Name=EGL39385.1;Note=identified by match to protein family HMM PF01106;gbkey=CDS;locus_tag=HMPREF1039_0936;product=NifU-like protein;protein_id=EGL39385.1;transl_table=11
AFIJ01000038.1	Genbank	gene	82287	82634	.	+	.	ID=gene-HMPREF1039_0937;Name=HMPREF1039_0937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0937
AFIJ01000038.1	Genbank	CDS	82287	82634	.	+	0	ID=cds-EGL39357.1;Parent=gene-HMPREF1039_0937;Dbxref=NCBI_GP:EGL39357.1;Name=EGL39357.1;gbkey=CDS;locus_tag=HMPREF1039_0937;product=hypothetical protein;protein_id=EGL39357.1;transl_table=11
AFIJ01000038.1	Genbank	gene	82670	82948	.	+	.	ID=gene-HMPREF1039_0938;Name=HMPREF1039_0938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0938
AFIJ01000038.1	Genbank	CDS	82670	82948	.	+	0	ID=cds-EGL39359.1;Parent=gene-HMPREF1039_0938;Dbxref=NCBI_GP:EGL39359.1;Name=EGL39359.1;gbkey=CDS;locus_tag=HMPREF1039_0938;product=hypothetical protein;protein_id=EGL39359.1;transl_table=11
AFIJ01000038.1	Genbank	gene	82972	83208	.	+	.	ID=gene-HMPREF1039_0939;Name=HMPREF1039_0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0939
AFIJ01000038.1	Genbank	CDS	82972	83208	.	+	0	ID=cds-EGL39390.1;Parent=gene-HMPREF1039_0939;Dbxref=NCBI_GP:EGL39390.1;Name=EGL39390.1;gbkey=CDS;locus_tag=HMPREF1039_0939;product=hypothetical protein;protein_id=EGL39390.1;transl_table=11
AFIJ01000038.1	Genbank	gene	83211	83882	.	+	.	ID=gene-HMPREF1039_0940;Name=HMPREF1039_0940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0940
AFIJ01000038.1	Genbank	CDS	83211	83882	.	+	0	ID=cds-EGL39405.1;Parent=gene-HMPREF1039_0940;Dbxref=NCBI_GP:EGL39405.1;Name=EGL39405.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF1039_0940;product=metallo-beta-lactamase domain protein;protein_id=EGL39405.1;transl_table=11
AFIJ01000038.1	Genbank	gene	83866	84297	.	+	.	ID=gene-HMPREF1039_0941;Name=HMPREF1039_0941;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0941
AFIJ01000038.1	Genbank	CDS	83866	84297	.	+	0	ID=cds-EGL39411.1;Parent=gene-HMPREF1039_0941;Dbxref=NCBI_GP:EGL39411.1;Name=EGL39411.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0941;product=hypothetical protein;protein_id=EGL39411.1;transl_table=11
AFIJ01000038.1	Genbank	gene	84257	84934	.	+	.	ID=gene-HMPREF1039_0942;Name=HMPREF1039_0942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0942
AFIJ01000038.1	Genbank	CDS	84257	84934	.	+	0	ID=cds-EGL39396.1;Parent=gene-HMPREF1039_0942;Dbxref=NCBI_GP:EGL39396.1;Name=EGL39396.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0942;product=hypothetical protein;protein_id=EGL39396.1;transl_table=11
AFIJ01000038.1	Genbank	gene	84921	86102	.	+	.	ID=gene-HMPREF1039_0943;Name=HMPREF1039_0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0943
AFIJ01000038.1	Genbank	CDS	84921	86102	.	+	0	ID=cds-EGL39426.1;Parent=gene-HMPREF1039_0943;Dbxref=NCBI_GP:EGL39426.1;Name=EGL39426.1;Note=identified by match to protein family HMM PF05893;gbkey=CDS;locus_tag=HMPREF1039_0943;product=Acyl-CoA reductase (LuxC);protein_id=EGL39426.1;transl_table=11
AFIJ01000038.1	Genbank	gene	86115	87524	.	+	.	ID=gene-HMPREF1039_0944;Name=HMPREF1039_0944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0944
AFIJ01000038.1	Genbank	CDS	86115	87524	.	+	0	ID=cds-EGL39367.1;Parent=gene-HMPREF1039_0944;Dbxref=NCBI_GP:EGL39367.1;Name=EGL39367.1;Note=identified by match to protein family HMM PF00501;gbkey=CDS;locus_tag=HMPREF1039_0944;product=AMP-binding enzyme;protein_id=EGL39367.1;transl_table=11
AFIJ01000038.1	Genbank	gene	87623	87790	.	+	.	ID=gene-HMPREF1039_0945;Name=HMPREF1039_0945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0945
AFIJ01000038.1	Genbank	CDS	87623	87790	.	+	0	ID=cds-EGL39373.1;Parent=gene-HMPREF1039_0945;Dbxref=NCBI_GP:EGL39373.1;Name=EGL39373.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0945;product=hypothetical protein;protein_id=EGL39373.1;transl_table=11
AFIJ01000038.1	Genbank	gene	87799	89082	.	+	.	ID=gene-HMPREF1039_0946;Name=fhlA;gbkey=Gene;gene=fhlA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0946
AFIJ01000038.1	Genbank	CDS	87799	89082	.	+	0	ID=cds-EGL39366.1;Parent=gene-HMPREF1039_0946;Dbxref=NCBI_GP:EGL39366.1;Name=EGL39366.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00158;gbkey=CDS;gene=fhlA;locus_tag=HMPREF1039_0946;product=Sigma-54 interaction domain protein;protein_id=EGL39366.1;transl_table=11
AFIJ01000038.1	Genbank	gene	89147	89512	.	+	.	ID=gene-HMPREF1039_0947;Name=HMPREF1039_0947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0947
AFIJ01000038.1	Genbank	CDS	89147	89512	.	+	0	ID=cds-EGL39413.1;Parent=gene-HMPREF1039_0947;Dbxref=NCBI_GP:EGL39413.1;Name=EGL39413.1;Note=identified by match to protein family HMM PF02001;gbkey=CDS;locus_tag=HMPREF1039_0947;product=hypothetical protein;protein_id=EGL39413.1;transl_table=11
AFIJ01000038.1	Genbank	gene	89505	90341	.	+	.	ID=gene-HMPREF1039_0948;Name=HMPREF1039_0948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0948
AFIJ01000038.1	Genbank	CDS	89505	90341	.	+	0	ID=cds-EGL39436.1;Parent=gene-HMPREF1039_0948;Dbxref=NCBI_GP:EGL39436.1;Name=EGL39436.1;gbkey=CDS;locus_tag=HMPREF1039_0948;product=nucleotide-binding protein;protein_id=EGL39436.1;transl_table=11
AFIJ01000038.1	Genbank	gene	90417	91028	.	-	.	ID=gene-HMPREF1039_0949;Name=HMPREF1039_0949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0949
AFIJ01000038.1	Genbank	CDS	90417	91028	.	-	0	ID=cds-EGL39372.1;Parent=gene-HMPREF1039_0949;Dbxref=NCBI_GP:EGL39372.1;Name=EGL39372.1;gbkey=CDS;locus_tag=HMPREF1039_0949;product=hypothetical protein;protein_id=EGL39372.1;transl_table=11
AFIJ01000038.1	Genbank	gene	91187	91327	.	-	.	ID=gene-HMPREF1039_0950;Name=HMPREF1039_0950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0950
AFIJ01000038.1	Genbank	CDS	91187	91327	.	-	0	ID=cds-EGL39355.1;Parent=gene-HMPREF1039_0950;Dbxref=NCBI_GP:EGL39355.1;Name=EGL39355.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0950;product=hypothetical protein;protein_id=EGL39355.1;transl_table=11
AFIJ01000038.1	Genbank	gene	91381	91677	.	-	.	ID=gene-HMPREF1039_0951;Name=HMPREF1039_0951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0951
AFIJ01000038.1	Genbank	CDS	91381	91677	.	-	0	ID=cds-EGL39401.1;Parent=gene-HMPREF1039_0951;Dbxref=NCBI_GP:EGL39401.1;Name=EGL39401.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0951;product=hypothetical protein;protein_id=EGL39401.1;transl_table=11
AFIJ01000038.1	Genbank	gene	91696	92862	.	-	.	ID=gene-HMPREF1039_0952;Name=HMPREF1039_0952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0952
AFIJ01000038.1	Genbank	CDS	91696	92862	.	-	0	ID=cds-EGL39393.1;Parent=gene-HMPREF1039_0952;Dbxref=NCBI_GP:EGL39393.1;Name=EGL39393.1;Note=identified by match to protein family HMM PF00817;gbkey=CDS;locus_tag=HMPREF1039_0952;product=ImpB/MucB/SamB family protein;protein_id=EGL39393.1;transl_table=11
AFIJ01000038.1	Genbank	gene	93178	94083	.	+	.	ID=gene-HMPREF1039_0953;Name=HMPREF1039_0953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0953
AFIJ01000038.1	Genbank	CDS	93178	94083	.	+	0	ID=cds-EGL39431.1;Parent=gene-HMPREF1039_0953;Dbxref=NCBI_GP:EGL39431.1;Name=EGL39431.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF1039_0953;product=LysR substrate binding domain protein;protein_id=EGL39431.1;transl_table=11
AFIJ01000038.1	Genbank	gene	94200	94325	.	-	.	ID=gene-HMPREF1039_0954;Name=HMPREF1039_0954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0954
AFIJ01000038.1	Genbank	CDS	94200	94325	.	-	0	ID=cds-EGL39389.1;Parent=gene-HMPREF1039_0954;Dbxref=NCBI_GP:EGL39389.1;Name=EGL39389.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0954;product=hypothetical protein;protein_id=EGL39389.1;transl_table=11
AFIJ01000038.1	Genbank	gene	94520	95398	.	-	.	ID=gene-HMPREF1039_0955;Name=HMPREF1039_0955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0955
AFIJ01000038.1	Genbank	CDS	94520	95398	.	-	0	ID=cds-EGL39352.1;Parent=gene-HMPREF1039_0955;Dbxref=NCBI_GP:EGL39352.1;Name=EGL39352.1;gbkey=CDS;locus_tag=HMPREF1039_0955;product=hypothetical protein;protein_id=EGL39352.1;transl_table=11
AFIJ01000038.1	Genbank	gene	95429	95848	.	-	.	ID=gene-HMPREF1039_0956;Name=HMPREF1039_0956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0956
AFIJ01000038.1	Genbank	CDS	95429	95848	.	-	0	ID=cds-EGL39348.1;Parent=gene-HMPREF1039_0956;Dbxref=NCBI_GP:EGL39348.1;Name=EGL39348.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_0956;product=hypothetical protein;protein_id=EGL39348.1;transl_table=11
##sequence-region AFIJ01000037.1 1 1106
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000037.1	Genbank	region	1	1106	.	+	.	ID=AFIJ01000037.1:1..1106;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000037.1	Genbank	gene	1	1106	.	-	.	ID=gene-HMPREF1039_1630;Name=HMPREF1039_1630;end_range=1106,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1630;partial=true;start_range=.,1
AFIJ01000037.1	Genbank	CDS	1	1106	.	-	2	ID=cds-EGL39488.1;Parent=gene-HMPREF1039_1630;Dbxref=NCBI_GP:EGL39488.1;Name=EGL39488.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=1106,.;gbkey=CDS;locus_tag=HMPREF1039_1630;partial=true;product=hypothetical protein;protein_id=EGL39488.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000036.1 1 38748
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000036.1	Genbank	region	1	38748	.	+	.	ID=AFIJ01000036.1:1..38748;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000036.1	Genbank	gene	181	708	.	-	.	ID=gene-HMPREF1039_1356;Name=HMPREF1039_1356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1356
AFIJ01000036.1	Genbank	CDS	181	708	.	-	0	ID=cds-EGL39527.1;Parent=gene-HMPREF1039_1356;Dbxref=NCBI_GP:EGL39527.1;Name=EGL39527.1;Note=identified by match to protein family HMM PF00881;gbkey=CDS;locus_tag=HMPREF1039_1356;product=nitroreductase family protein;protein_id=EGL39527.1;transl_table=11
AFIJ01000036.1	Genbank	gene	842	1210	.	-	.	ID=gene-HMPREF1039_1357;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF1039_1357
AFIJ01000036.1	Genbank	CDS	842	1210	.	-	0	ID=cds-EGL39521.1;Parent=gene-HMPREF1039_1357;Dbxref=NCBI_GP:EGL39521.1;Name=EGL39521.1;Note=identified by match to protein family HMM PF00542%3B match to protein family HMM TIGR00855;gbkey=CDS;gene=rplL;locus_tag=HMPREF1039_1357;product=ribosomal protein L7/L12;protein_id=EGL39521.1;transl_table=11
AFIJ01000036.1	Genbank	gene	1258	1815	.	-	.	ID=gene-HMPREF1039_1358;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_1358
AFIJ01000036.1	Genbank	CDS	1258	1815	.	-	0	ID=cds-EGL39532.1;Parent=gene-HMPREF1039_1358;Dbxref=NCBI_GP:EGL39532.1;Name=EGL39532.1;Note=identified by match to protein family HMM PF00466;gbkey=CDS;gene=rplJ;locus_tag=HMPREF1039_1358;product=ribosomal protein L10;protein_id=EGL39532.1;transl_table=11
AFIJ01000036.1	Genbank	gene	1990	2706	.	-	.	ID=gene-HMPREF1039_1359;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1359
AFIJ01000036.1	Genbank	CDS	1990	2706	.	-	0	ID=cds-EGL39526.1;Parent=gene-HMPREF1039_1359;Dbxref=NCBI_GP:EGL39526.1;Name=EGL39526.1;Note=identified by match to protein family HMM PF00687%3B match to protein family HMM TIGR01169;gbkey=CDS;gene=rplA;locus_tag=HMPREF1039_1359;product=ribosomal protein L1;protein_id=EGL39526.1;transl_table=11
AFIJ01000036.1	Genbank	gene	2765	3190	.	-	.	ID=gene-HMPREF1039_1360;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1360
AFIJ01000036.1	Genbank	CDS	2765	3190	.	-	0	ID=cds-EGL39552.1;Parent=gene-HMPREF1039_1360;Dbxref=NCBI_GP:EGL39552.1;Name=EGL39552.1;Note=identified by match to protein family HMM PF00298%3B match to protein family HMM PF03946%3B match to protein family HMM TIGR01632;gbkey=CDS;gene=rplK;locus_tag=HMPREF1039_1360;product=ribosomal protein L11;protein_id=EGL39552.1;transl_table=11
AFIJ01000036.1	Genbank	gene	3282	3821	.	-	.	ID=gene-HMPREF1039_1361;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=HMPREF1039_1361
AFIJ01000036.1	Genbank	CDS	3282	3821	.	-	0	ID=cds-EGL39529.1;Parent=gene-HMPREF1039_1361;Dbxref=NCBI_GP:EGL39529.1;Name=EGL39529.1;Note=identified by match to protein family HMM PF00467%3B match to protein family HMM PF02357%3B match to protein family HMM TIGR00922;gbkey=CDS;gene=nusG;locus_tag=HMPREF1039_1361;product=transcription termination/antitermination factor NusG;protein_id=EGL39529.1;transl_table=11
AFIJ01000036.1	Genbank	gene	3837	4067	.	-	.	ID=gene-HMPREF1039_1362;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1362
AFIJ01000036.1	Genbank	CDS	3837	4067	.	-	0	ID=cds-EGL39546.1;Parent=gene-HMPREF1039_1362;Dbxref=NCBI_GP:EGL39546.1;Name=EGL39546.1;Note=identified by match to protein family HMM PF00584%3B match to protein family HMM TIGR00964;gbkey=CDS;gene=secE;locus_tag=HMPREF1039_1362;product=preprotein translocase%2C SecE subunit;protein_id=EGL39546.1;transl_table=11
AFIJ01000036.1	Genbank	gene	4105	4254	.	-	.	ID=gene-HMPREF1039_1363;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF1039_1363
AFIJ01000036.1	Genbank	CDS	4105	4254	.	-	0	ID=cds-EGL39512.1;Parent=gene-HMPREF1039_1363;Dbxref=NCBI_GP:EGL39512.1;Name=EGL39512.1;Note=identified by match to protein family HMM PF00471%3B match to protein family HMM TIGR01023;gbkey=CDS;gene=rpmG;locus_tag=HMPREF1039_1363;product=ribosomal protein L33;protein_id=EGL39512.1;transl_table=11
AFIJ01000036.1	Genbank	gene	4599	4674	.	+	.	ID=gene-HMPREF1039_1364;Name=HMPREF1039_1364;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1364
AFIJ01000036.1	Genbank	tRNA	4599	4674	.	+	.	ID=rna-HMPREF1039_1364;Parent=gene-HMPREF1039_1364;gbkey=tRNA;locus_tag=HMPREF1039_1364;product=tRNA-Thr
AFIJ01000036.1	Genbank	exon	4599	4674	.	+	.	ID=exon-HMPREF1039_1364-1;Parent=rna-HMPREF1039_1364;gbkey=tRNA;locus_tag=HMPREF1039_1364;product=tRNA-Thr
AFIJ01000036.1	Genbank	gene	4715	5161	.	-	.	ID=gene-HMPREF1039_1365;Name=HMPREF1039_1365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1365
AFIJ01000036.1	Genbank	CDS	4715	5161	.	-	0	ID=cds-EGL39519.1;Parent=gene-HMPREF1039_1365;Dbxref=NCBI_GP:EGL39519.1;Name=EGL39519.1;gbkey=CDS;locus_tag=HMPREF1039_1365;product=hypothetical protein;protein_id=EGL39519.1;transl_table=11
AFIJ01000036.1	Genbank	gene	5319	5888	.	+	.	ID=gene-HMPREF1039_1366;Name=HMPREF1039_1366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1366
AFIJ01000036.1	Genbank	CDS	5319	5888	.	+	0	ID=cds-EGL39524.1;Parent=gene-HMPREF1039_1366;Dbxref=NCBI_GP:EGL39524.1;Name=EGL39524.1;Note=identified by match to protein family HMM PF02632;gbkey=CDS;locus_tag=HMPREF1039_1366;product=BioY family protein;protein_id=EGL39524.1;transl_table=11
AFIJ01000036.1	Genbank	gene	5905	6579	.	+	.	ID=gene-HMPREF1039_1367;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1367
AFIJ01000036.1	Genbank	CDS	5905	6579	.	+	0	ID=cds-EGL39545.1;Parent=gene-HMPREF1039_1367;Dbxref=NCBI_GP:EGL39545.1;Name=EGL39545.1;Note=identified by match to protein family HMM TIGR00347;gbkey=CDS;gene=bioD;locus_tag=HMPREF1039_1367;product=dethiobiotin synthase;protein_id=EGL39545.1;transl_table=11
AFIJ01000036.1	Genbank	gene	6583	7935	.	+	.	ID=gene-HMPREF1039_1368;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1368
AFIJ01000036.1	Genbank	CDS	6583	7935	.	+	0	ID=cds-EGL39550.1;Parent=gene-HMPREF1039_1368;Dbxref=NCBI_GP:EGL39550.1;Name=EGL39550.1;Note=identified by match to protein family HMM PF00202%3B match to protein family HMM TIGR00508;gbkey=CDS;gene=bioA;locus_tag=HMPREF1039_1368;product=adenosylmethionine-8-amino-7-oxononanoate transaminase;protein_id=EGL39550.1;transl_table=11
AFIJ01000036.1	Genbank	gene	7932	8216	.	-	.	ID=gene-HMPREF1039_1369;Name=HMPREF1039_1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1369
AFIJ01000036.1	Genbank	CDS	7932	8216	.	-	0	ID=cds-EGL39513.1;Parent=gene-HMPREF1039_1369;Dbxref=NCBI_GP:EGL39513.1;Name=EGL39513.1;gbkey=CDS;locus_tag=HMPREF1039_1369;product=hypothetical protein;protein_id=EGL39513.1;transl_table=11
AFIJ01000036.1	Genbank	gene	8279	8614	.	-	.	ID=gene-HMPREF1039_1370;Name=HMPREF1039_1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1370
AFIJ01000036.1	Genbank	CDS	8279	8614	.	-	0	ID=cds-EGL39518.1;Parent=gene-HMPREF1039_1370;Dbxref=NCBI_GP:EGL39518.1;Name=EGL39518.1;Note=identified by match to protein family HMM PF02579;gbkey=CDS;locus_tag=HMPREF1039_1370;product=dinitrogenase iron-molybdenum cofactor;protein_id=EGL39518.1;transl_table=11
AFIJ01000036.1	Genbank	gene	8706	9152	.	-	.	ID=gene-HMPREF1039_1371;Name=HMPREF1039_1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1371
AFIJ01000036.1	Genbank	CDS	8706	9152	.	-	0	ID=cds-EGL39537.1;Parent=gene-HMPREF1039_1371;Dbxref=NCBI_GP:EGL39537.1;Name=EGL39537.1;gbkey=CDS;locus_tag=HMPREF1039_1371;product=hypothetical protein;protein_id=EGL39537.1;transl_table=11
AFIJ01000036.1	Genbank	gene	9360	10382	.	-	.	ID=gene-HMPREF1039_1372;Name=HMPREF1039_1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1372
AFIJ01000036.1	Genbank	CDS	9360	10382	.	-	0	ID=cds-EGL39510.1;Parent=gene-HMPREF1039_1372;Dbxref=NCBI_GP:EGL39510.1;Name=EGL39510.1;Note=identified by match to protein family HMM PF03734;gbkey=CDS;locus_tag=HMPREF1039_1372;product=ErfK/YbiS/YcfS/YnhG;protein_id=EGL39510.1;transl_table=11
AFIJ01000036.1	Genbank	gene	10410	11369	.	-	.	ID=gene-HMPREF1039_1373;Name=HMPREF1039_1373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1373
AFIJ01000036.1	Genbank	CDS	10410	11369	.	-	0	ID=cds-EGL39520.1;Parent=gene-HMPREF1039_1373;Dbxref=NCBI_GP:EGL39520.1;Name=EGL39520.1;Note=identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866;gbkey=CDS;locus_tag=HMPREF1039_1373;product=lactate/malate dehydrogenase%2C NAD binding domain protein;protein_id=EGL39520.1;transl_table=11
AFIJ01000036.1	Genbank	gene	11637	11822	.	-	.	ID=gene-HMPREF1039_1374;Name=HMPREF1039_1374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1374
AFIJ01000036.1	Genbank	CDS	11637	11822	.	-	0	ID=cds-EGL39535.1;Parent=gene-HMPREF1039_1374;Dbxref=NCBI_GP:EGL39535.1;Name=EGL39535.1;gbkey=CDS;locus_tag=HMPREF1039_1374;product=hypothetical protein;protein_id=EGL39535.1;transl_table=11
AFIJ01000036.1	Genbank	gene	11993	13288	.	-	.	ID=gene-HMPREF1039_1375;Name=HMPREF1039_1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1375
AFIJ01000036.1	Genbank	CDS	11993	13288	.	-	0	ID=cds-EGL39523.1;Parent=gene-HMPREF1039_1375;Dbxref=NCBI_GP:EGL39523.1;Name=EGL39523.1;Note=identified by match to protein family HMM PF06354;gbkey=CDS;locus_tag=HMPREF1039_1375;product=hypothetical protein;protein_id=EGL39523.1;transl_table=11
AFIJ01000036.1	Genbank	gene	13318	13974	.	-	.	ID=gene-HMPREF1039_1376;Name=HMPREF1039_1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1376
AFIJ01000036.1	Genbank	CDS	13318	13974	.	-	0	ID=cds-EGL39511.1;Parent=gene-HMPREF1039_1376;Dbxref=NCBI_GP:EGL39511.1;Name=EGL39511.1;Note=identified by match to protein family HMM PF08348;gbkey=CDS;locus_tag=HMPREF1039_1376;product=YheO-like protein;protein_id=EGL39511.1;transl_table=11
AFIJ01000036.1	Genbank	gene	14087	14800	.	-	.	ID=gene-HMPREF1039_1377;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1377
AFIJ01000036.1	Genbank	CDS	14087	14800	.	-	0	ID=cds-EGL39551.1;Parent=gene-HMPREF1039_1377;Dbxref=NCBI_GP:EGL39551.1;Name=EGL39551.1;Note=identified by match to protein family HMM PF02527%3B match to protein family HMM TIGR00138;gbkey=CDS;gene=gidB;locus_tag=HMPREF1039_1377;product=16S rRNA methyltransferase GidB;protein_id=EGL39551.1;transl_table=11
AFIJ01000036.1	Genbank	gene	14787	16676	.	-	.	ID=gene-HMPREF1039_1378;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1378
AFIJ01000036.1	Genbank	CDS	14787	16676	.	-	0	ID=cds-EGL39536.1;Parent=gene-HMPREF1039_1378;Dbxref=NCBI_GP:EGL39536.1;Name=EGL39536.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00136;gbkey=CDS;gene=gidA;locus_tag=HMPREF1039_1378;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;protein_id=EGL39536.1;transl_table=11
AFIJ01000036.1	Genbank	gene	16693	18072	.	-	.	ID=gene-HMPREF1039_1379;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1379
AFIJ01000036.1	Genbank	CDS	16693	18072	.	-	0	ID=cds-EGL39554.1;Parent=gene-HMPREF1039_1379;Dbxref=NCBI_GP:EGL39554.1;Name=EGL39554.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00450;gbkey=CDS;gene=trmE;locus_tag=HMPREF1039_1379;product=tRNA modification GTPase TrmE;protein_id=EGL39554.1;transl_table=11
AFIJ01000036.1	Genbank	gene	18131	18880	.	-	.	ID=gene-HMPREF1039_1380;Name=HMPREF1039_1380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1380
AFIJ01000036.1	Genbank	CDS	18131	18880	.	-	0	ID=cds-EGL39542.1;Parent=gene-HMPREF1039_1380;Dbxref=NCBI_GP:EGL39542.1;Name=EGL39542.1;Note=identified by match to protein family HMM PF01424;gbkey=CDS;locus_tag=HMPREF1039_1380;product=R3H domain protein;protein_id=EGL39542.1;transl_table=11
AFIJ01000036.1	Genbank	gene	18883	19554	.	-	.	ID=gene-HMPREF1039_1381;Name=HMPREF1039_1381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1381
AFIJ01000036.1	Genbank	CDS	18883	19554	.	-	0	ID=cds-EGL39543.1;Parent=gene-HMPREF1039_1381;Dbxref=NCBI_GP:EGL39543.1;Name=EGL39543.1;Note=identified by match to protein family HMM PF02096%3B match to protein family HMM TIGR03592;gbkey=CDS;locus_tag=HMPREF1039_1381;product=membrane protein insertase%2C YidC/Oxa1 family;protein_id=EGL39543.1;transl_table=11
AFIJ01000036.1	Genbank	gene	19611	19820	.	-	.	ID=gene-HMPREF1039_1382;Name=HMPREF1039_1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1382
AFIJ01000036.1	Genbank	CDS	19611	19820	.	-	0	ID=cds-EGL39516.1;Parent=gene-HMPREF1039_1382;Dbxref=NCBI_GP:EGL39516.1;Name=EGL39516.1;Note=identified by match to protein family HMM PF01809%3B match to protein family HMM TIGR00278;gbkey=CDS;locus_tag=HMPREF1039_1382;product=conserved hypothetical protein YidD;protein_id=EGL39516.1;transl_table=11
AFIJ01000036.1	Genbank	gene	19824	20180	.	-	.	ID=gene-HMPREF1039_1383;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1383
AFIJ01000036.1	Genbank	CDS	19824	20180	.	-	0	ID=cds-EGL39533.1;Parent=gene-HMPREF1039_1383;Dbxref=NCBI_GP:EGL39533.1;Name=EGL39533.1;Note=identified by match to protein family HMM TIGR00188;gbkey=CDS;gene=rnpA;locus_tag=HMPREF1039_1383;product=ribonuclease P protein component;protein_id=EGL39533.1;transl_table=11
AFIJ01000036.1	Genbank	gene	20255	20389	.	-	.	ID=gene-HMPREF1039_1384;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=HMPREF1039_1384
AFIJ01000036.1	Genbank	CDS	20255	20389	.	-	0	ID=cds-EGL39509.1;Parent=gene-HMPREF1039_1384;Dbxref=NCBI_GP:EGL39509.1;Name=EGL39509.1;Note=identified by match to protein family HMM PF00468%3B match to protein family HMM TIGR01030;gbkey=CDS;gene=rpmH;locus_tag=HMPREF1039_1384;product=ribosomal protein L34;protein_id=EGL39509.1;transl_table=11
AFIJ01000036.1	Genbank	gene	20431	20604	.	-	.	ID=gene-HMPREF1039_1385;Name=HMPREF1039_1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1385
AFIJ01000036.1	Genbank	CDS	20431	20604	.	-	0	ID=cds-EGL39547.1;Parent=gene-HMPREF1039_1385;Dbxref=NCBI_GP:EGL39547.1;Name=EGL39547.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1385;product=hypothetical protein;protein_id=EGL39547.1;transl_table=11
AFIJ01000036.1	Genbank	gene	20900	22396	.	+	.	ID=gene-HMPREF1039_1386;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1386
AFIJ01000036.1	Genbank	CDS	20900	22396	.	+	0	ID=cds-EGL39517.1;Parent=gene-HMPREF1039_1386;Dbxref=NCBI_GP:EGL39517.1;Name=EGL39517.1;Note=identified by match to protein family HMM PF00308%3B match to protein family HMM PF08299%3B match to protein family HMM TIGR00362;gbkey=CDS;gene=dnaA;locus_tag=HMPREF1039_1386;product=chromosomal replication initiator protein DnaA;protein_id=EGL39517.1;transl_table=11
AFIJ01000036.1	Genbank	gene	22513	23736	.	+	.	ID=gene-HMPREF1039_1387;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=HMPREF1039_1387
AFIJ01000036.1	Genbank	CDS	22513	23736	.	+	0	ID=cds-EGL39525.1;Parent=gene-HMPREF1039_1387;Dbxref=NCBI_GP:EGL39525.1;Name=EGL39525.1;Note=identified by match to protein family HMM PF00712%3B match to protein family HMM PF02767%3B match to protein family HMM PF02768%3B match to protein family HMM TIGR00663;gbkey=CDS;gene=dnaN;locus_tag=HMPREF1039_1387;product=DNA polymerase III%2C beta subunit;protein_id=EGL39525.1;transl_table=11
AFIJ01000036.1	Genbank	gene	23736	23957	.	+	.	ID=gene-HMPREF1039_1388;Name=HMPREF1039_1388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1388
AFIJ01000036.1	Genbank	CDS	23736	23957	.	+	0	ID=cds-EGL39539.1;Parent=gene-HMPREF1039_1388;Dbxref=NCBI_GP:EGL39539.1;Name=EGL39539.1;gbkey=CDS;locus_tag=HMPREF1039_1388;product=S4 domain family protein;protein_id=EGL39539.1;transl_table=11
AFIJ01000036.1	Genbank	gene	23954	24562	.	+	.	ID=gene-HMPREF1039_1389;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1389
AFIJ01000036.1	Genbank	CDS	23954	24562	.	+	0	ID=cds-EGL39544.1;Parent=gene-HMPREF1039_1389;Dbxref=NCBI_GP:EGL39544.1;Name=EGL39544.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;gene=recF;locus_tag=HMPREF1039_1389;product=DNA replication and repair protein RecF;protein_id=EGL39544.1;transl_table=11
AFIJ01000036.1	Genbank	gene	24583	25056	.	+	.	ID=gene-HMPREF1039_1390;Name=HMPREF1039_1390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1390
AFIJ01000036.1	Genbank	CDS	24583	25056	.	+	0	ID=cds-EGL39531.1;Parent=gene-HMPREF1039_1390;Dbxref=NCBI_GP:EGL39531.1;Name=EGL39531.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1390;product=DNA replication and repair protein RecF domain protein;protein_id=EGL39531.1;transl_table=11
AFIJ01000036.1	Genbank	gene	25046	25552	.	+	.	ID=gene-HMPREF1039_1391;Name=HMPREF1039_1391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1391
AFIJ01000036.1	Genbank	CDS	25046	25552	.	+	0	ID=cds-EGL39540.1;Parent=gene-HMPREF1039_1391;Dbxref=NCBI_GP:EGL39540.1;Name=EGL39540.1;gbkey=CDS;locus_tag=HMPREF1039_1391;product=hypothetical protein;protein_id=EGL39540.1;transl_table=11
AFIJ01000036.1	Genbank	gene	25543	25938	.	+	.	ID=gene-HMPREF1039_1392;Name=HMPREF1039_1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1392
AFIJ01000036.1	Genbank	CDS	25543	25938	.	+	0	ID=cds-EGL39522.1;Parent=gene-HMPREF1039_1392;Dbxref=NCBI_GP:EGL39522.1;Name=EGL39522.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1392;product=hypothetical protein;protein_id=EGL39522.1;transl_table=11
AFIJ01000036.1	Genbank	gene	25941	26201	.	+	.	ID=gene-HMPREF1039_1393;Name=HMPREF1039_1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1393
AFIJ01000036.1	Genbank	CDS	25941	26201	.	+	0	ID=cds-EGL39530.1;Parent=gene-HMPREF1039_1393;Dbxref=NCBI_GP:EGL39530.1;Name=EGL39530.1;gbkey=CDS;locus_tag=HMPREF1039_1393;product=hypothetical protein;protein_id=EGL39530.1;transl_table=11
AFIJ01000036.1	Genbank	gene	26270	28192	.	+	.	ID=gene-HMPREF1039_1394;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1394
AFIJ01000036.1	Genbank	CDS	26270	28192	.	+	0	ID=cds-EGL39553.1;Parent=gene-HMPREF1039_1394;Dbxref=NCBI_GP:EGL39553.1;Name=EGL39553.1;Note=identified by match to protein family HMM PF00204%3B match to protein family HMM PF00986%3B match to protein family HMM PF01751%3B match to protein family HMM PF02518%3B match to protein family HMM TIGR01059;gbkey=CDS;gene=gyrB;locus_tag=HMPREF1039_1394;product=DNA gyrase%2C B subunit;protein_id=EGL39553.1;transl_table=11
AFIJ01000036.1	Genbank	gene	28302	29150	.	+	.	ID=gene-HMPREF1039_1395;Name=HMPREF1039_1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1395
AFIJ01000036.1	Genbank	CDS	28302	29150	.	+	0	ID=cds-EGL39541.1;Parent=gene-HMPREF1039_1395;Dbxref=NCBI_GP:EGL39541.1;Name=EGL39541.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF01595;gbkey=CDS;locus_tag=HMPREF1039_1395;product=hypothetical protein;protein_id=EGL39541.1;transl_table=11
AFIJ01000036.1	Genbank	gene	29210	29665	.	+	.	ID=gene-HMPREF1039_1396;Name=HMPREF1039_1396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1396
AFIJ01000036.1	Genbank	CDS	29210	29665	.	+	0	ID=cds-EGL39515.1;Parent=gene-HMPREF1039_1396;Dbxref=NCBI_GP:EGL39515.1;Name=EGL39515.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF03471;gbkey=CDS;locus_tag=HMPREF1039_1396;product=transporter associated domain protein;protein_id=EGL39515.1;transl_table=11
AFIJ01000036.1	Genbank	gene	29822	30259	.	+	.	ID=gene-HMPREF1039_1397;Name=dps1;gbkey=Gene;gene=dps1;gene_biotype=protein_coding;locus_tag=HMPREF1039_1397
AFIJ01000036.1	Genbank	CDS	29822	30259	.	+	0	ID=cds-EGL39534.1;Parent=gene-HMPREF1039_1397;Dbxref=NCBI_GP:EGL39534.1;Name=EGL39534.1;Note=identified by match to protein family HMM PF00210;gbkey=CDS;gene=dps1;locus_tag=HMPREF1039_1397;product=DNA protection during starvation protein 1;protein_id=EGL39534.1;transl_table=11
AFIJ01000036.1	Genbank	gene	30354	31151	.	+	.	ID=gene-HMPREF1039_1398;Name=HMPREF1039_1398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1398
AFIJ01000036.1	Genbank	CDS	30354	31151	.	+	0	ID=cds-EGL39549.1;Parent=gene-HMPREF1039_1398;Dbxref=NCBI_GP:EGL39549.1;Name=EGL39549.1;Note=identified by match to protein family HMM PF02409;gbkey=CDS;locus_tag=HMPREF1039_1398;product=O-methyltransferase domain protein;protein_id=EGL39549.1;transl_table=11
AFIJ01000036.1	Genbank	gene	31196	32194	.	-	.	ID=gene-HMPREF1039_1399;Name=HMPREF1039_1399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1399
AFIJ01000036.1	Genbank	CDS	31196	32194	.	-	0	ID=cds-EGL39538.1;Parent=gene-HMPREF1039_1399;Dbxref=NCBI_GP:EGL39538.1;Name=EGL39538.1;Note=identified by match to protein family HMM PF00180;gbkey=CDS;locus_tag=HMPREF1039_1399;product=putative isocitrate dehydrogenase%2C NAD-dependent;protein_id=EGL39538.1;transl_table=11
AFIJ01000036.1	Genbank	gene	32194	33537	.	-	.	ID=gene-HMPREF1039_1400;Name=HMPREF1039_1400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1400
AFIJ01000036.1	Genbank	CDS	32194	33537	.	-	0	ID=cds-EGL39528.1;Parent=gene-HMPREF1039_1400;Dbxref=NCBI_GP:EGL39528.1;Name=EGL39528.1;Note=identified by match to protein family HMM PF00285;gbkey=CDS;locus_tag=HMPREF1039_1400;product=citrate (Si)-synthase;protein_id=EGL39528.1;transl_table=11
AFIJ01000036.1	Genbank	gene	33821	36121	.	+	.	ID=gene-HMPREF1039_1401;Name=HMPREF1039_1401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1401
AFIJ01000036.1	Genbank	CDS	33821	36121	.	+	0	ID=cds-EGL39508.1;Parent=gene-HMPREF1039_1401;Dbxref=NCBI_GP:EGL39508.1;Name=EGL39508.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM PF00694;gbkey=CDS;locus_tag=HMPREF1039_1401;product=aconitase domain protein;protein_id=EGL39508.1;transl_table=11
AFIJ01000036.1	Genbank	gene	36261	37028	.	+	.	ID=gene-HMPREF1039_1402;Name=HMPREF1039_1402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1402
AFIJ01000036.1	Genbank	CDS	36261	37028	.	+	0	ID=cds-EGL39548.1;Parent=gene-HMPREF1039_1402;Dbxref=NCBI_GP:EGL39548.1;Name=EGL39548.1;gbkey=CDS;locus_tag=HMPREF1039_1402;product=hypothetical protein;protein_id=EGL39548.1;transl_table=11
AFIJ01000036.1	Genbank	gene	37094	37936	.	-	.	ID=gene-HMPREF1039_1403;Name=HMPREF1039_1403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1403
AFIJ01000036.1	Genbank	CDS	37094	37936	.	-	0	ID=cds-EGL39514.1;Parent=gene-HMPREF1039_1403;Dbxref=NCBI_GP:EGL39514.1;Name=EGL39514.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02311;gbkey=CDS;locus_tag=HMPREF1039_1403;product=transcriptional regulator%2C AraC family;protein_id=EGL39514.1;transl_table=11
AFIJ01000036.1	Genbank	gene	38064	38741	.	+	.	ID=gene-HMPREF1039_1404;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1404
AFIJ01000036.1	Genbank	CDS	38064	38741	.	+	0	ID=cds-EGL39507.1;Parent=gene-HMPREF1039_1404;Dbxref=NCBI_GP:EGL39507.1;Name=EGL39507.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01678%3B match to protein family HMM TIGR00652;gbkey=CDS;gene=dapF;locus_tag=HMPREF1039_1404;product=diaminopimelate epimerase;protein_id=EGL39507.1;transl_table=11
##sequence-region AFIJ01000035.1 1 55251
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000035.1	Genbank	region	1	55251	.	+	.	ID=AFIJ01000035.1:1..55251;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000035.1	Genbank	gene	176	991	.	-	.	ID=gene-HMPREF1039_1201;Name=HMPREF1039_1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1201
AFIJ01000035.1	Genbank	CDS	176	991	.	-	0	ID=cds-EGL39647.1;Parent=gene-HMPREF1039_1201;Dbxref=NCBI_GP:EGL39647.1;Name=EGL39647.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF1039_1201;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EGL39647.1;transl_table=11
AFIJ01000035.1	Genbank	gene	1089	1748	.	-	.	ID=gene-HMPREF1039_1202;Name=resD;gbkey=Gene;gene=resD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1202
AFIJ01000035.1	Genbank	CDS	1089	1748	.	-	0	ID=cds-EGL39626.1;Parent=gene-HMPREF1039_1202;Dbxref=NCBI_GP:EGL39626.1;Name=EGL39626.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;gene=resD;locus_tag=HMPREF1039_1202;product=response regulator receiver domain protein;protein_id=EGL39626.1;transl_table=11
AFIJ01000035.1	Genbank	gene	1733	2236	.	-	.	ID=gene-HMPREF1039_1203;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1203
AFIJ01000035.1	Genbank	CDS	1733	2236	.	-	0	ID=cds-EGL39641.1;Parent=gene-HMPREF1039_1203;Dbxref=NCBI_GP:EGL39641.1;Name=EGL39641.1;Note=identified by match to protein family HMM PF01288%3B match to protein family HMM TIGR01498;gbkey=CDS;gene=folK;locus_tag=HMPREF1039_1203;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=EGL39641.1;transl_table=11
AFIJ01000035.1	Genbank	gene	2229	2591	.	-	.	ID=gene-HMPREF1039_1204;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1204
AFIJ01000035.1	Genbank	CDS	2229	2591	.	-	0	ID=cds-EGL39603.1;Parent=gene-HMPREF1039_1204;Dbxref=NCBI_GP:EGL39603.1;Name=EGL39603.1;Note=identified by match to protein family HMM PF02152%3B match to protein family HMM TIGR00525%3B match to protein family HMM TIGR00526;gbkey=CDS;gene=folB;locus_tag=HMPREF1039_1204;product=dihydroneopterin aldolase;protein_id=EGL39603.1;transl_table=11
AFIJ01000035.1	Genbank	gene	2591	3436	.	-	.	ID=gene-HMPREF1039_1205;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=HMPREF1039_1205
AFIJ01000035.1	Genbank	CDS	2591	3436	.	-	0	ID=cds-EGL39646.1;Parent=gene-HMPREF1039_1205;Dbxref=NCBI_GP:EGL39646.1;Name=EGL39646.1;Note=identified by match to protein family HMM PF00809%3B match to protein family HMM TIGR01496;gbkey=CDS;gene=folP;locus_tag=HMPREF1039_1205;product=dihydropteroate synthase;protein_id=EGL39646.1;transl_table=11
AFIJ01000035.1	Genbank	gene	3426	4025	.	-	.	ID=gene-HMPREF1039_1206;Name=HMPREF1039_1206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1206
AFIJ01000035.1	Genbank	CDS	3426	4025	.	-	0	ID=cds-EGL39619.1;Parent=gene-HMPREF1039_1206;Dbxref=NCBI_GP:EGL39619.1;Name=EGL39619.1;Note=identified by match to protein family HMM PF01227;gbkey=CDS;locus_tag=HMPREF1039_1206;product=putative GTP cyclohydrolase I;protein_id=EGL39619.1;transl_table=11
AFIJ01000035.1	Genbank	gene	4044	4442	.	-	.	ID=gene-HMPREF1039_1207;Name=HMPREF1039_1207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1207
AFIJ01000035.1	Genbank	CDS	4044	4442	.	-	0	ID=cds-EGL39622.1;Parent=gene-HMPREF1039_1207;Dbxref=NCBI_GP:EGL39622.1;Name=EGL39622.1;gbkey=CDS;locus_tag=HMPREF1039_1207;product=hypothetical protein;protein_id=EGL39622.1;transl_table=11
AFIJ01000035.1	Genbank	gene	4459	4974	.	-	.	ID=gene-HMPREF1039_1208;Name=HMPREF1039_1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1208
AFIJ01000035.1	Genbank	CDS	4459	4974	.	-	0	ID=cds-EGL39632.1;Parent=gene-HMPREF1039_1208;Dbxref=NCBI_GP:EGL39632.1;Name=EGL39632.1;gbkey=CDS;locus_tag=HMPREF1039_1208;product=hypothetical protein;protein_id=EGL39632.1;transl_table=11
AFIJ01000035.1	Genbank	gene	5101	6204	.	+	.	ID=gene-HMPREF1039_1209;Name=HMPREF1039_1209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1209
AFIJ01000035.1	Genbank	CDS	5101	6204	.	+	0	ID=cds-EGL39612.1;Parent=gene-HMPREF1039_1209;Dbxref=NCBI_GP:EGL39612.1;Name=EGL39612.1;Note=identified by match to protein family HMM PF01757;gbkey=CDS;locus_tag=HMPREF1039_1209;product=acyltransferase;protein_id=EGL39612.1;transl_table=11
AFIJ01000035.1	Genbank	gene	6316	7098	.	-	.	ID=gene-HMPREF1039_1210;Name=crt;gbkey=Gene;gene=crt;gene_biotype=protein_coding;locus_tag=HMPREF1039_1210
AFIJ01000035.1	Genbank	CDS	6316	7098	.	-	0	ID=cds-EGL39624.1;Parent=gene-HMPREF1039_1210;Dbxref=NCBI_GP:EGL39624.1;Name=EGL39624.1;Note=identified by match to protein family HMM PF00378;gbkey=CDS;gene=crt;locus_tag=HMPREF1039_1210;product=3-hydroxybutyryl-CoA dehydratase;protein_id=EGL39624.1;transl_table=11
AFIJ01000035.1	Genbank	gene	7162	8022	.	-	.	ID=gene-HMPREF1039_1211;Name=hbd;gbkey=Gene;gene=hbd;gene_biotype=protein_coding;locus_tag=HMPREF1039_1211
AFIJ01000035.1	Genbank	CDS	7162	8022	.	-	0	ID=cds-EGL39618.1;Parent=gene-HMPREF1039_1211;Dbxref=NCBI_GP:EGL39618.1;Name=EGL39618.1;Note=identified by match to protein family HMM PF00725%3B match to protein family HMM PF02737;gbkey=CDS;gene=hbd;locus_tag=HMPREF1039_1211;product=3-hydroxyacyl-CoA dehydrogenase%2C NAD binding domain protein;protein_id=EGL39618.1;transl_table=11
AFIJ01000035.1	Genbank	gene	8055	8234	.	-	.	ID=gene-HMPREF1039_1212;Name=HMPREF1039_1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1212
AFIJ01000035.1	Genbank	CDS	8055	8234	.	-	0	ID=cds-EGL39627.1;Parent=gene-HMPREF1039_1212;Dbxref=NCBI_GP:EGL39627.1;Name=EGL39627.1;gbkey=CDS;locus_tag=HMPREF1039_1212;product=hypothetical protein;protein_id=EGL39627.1;transl_table=11
AFIJ01000035.1	Genbank	gene	8267	9640	.	-	.	ID=gene-HMPREF1039_1213;Name=HMPREF1039_1213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1213
AFIJ01000035.1	Genbank	CDS	8267	9640	.	-	0	ID=cds-EGL39640.1;Parent=gene-HMPREF1039_1213;Dbxref=NCBI_GP:EGL39640.1;Name=EGL39640.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;locus_tag=HMPREF1039_1213;product=carbohydrate kinase%2C FGGY family protein;protein_id=EGL39640.1;transl_table=11
AFIJ01000035.1	Genbank	gene	9914	12961	.	-	.	ID=gene-HMPREF1039_1214;Name=HMPREF1039_1214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1214
AFIJ01000035.1	Genbank	CDS	9914	12961	.	-	0	ID=cds-EGL39601.1;Parent=gene-HMPREF1039_1214;Dbxref=NCBI_GP:EGL39601.1;Name=EGL39601.1;Note=RND transporter%2C Hydrophobe/Amphiphile Efflux-1 (HAE1)/Heavy Metal Efflux (HME) family%2C permease protein%3B identified by match to protein family HMM PF00873;gbkey=CDS;locus_tag=HMPREF1039_1214;product=RND transporter%2C HAE1/HME family%2C permease protein;protein_id=EGL39601.1;transl_table=11
AFIJ01000035.1	Genbank	gene	12958	14043	.	-	.	ID=gene-HMPREF1039_1215;Name=HMPREF1039_1215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1215
AFIJ01000035.1	Genbank	CDS	12958	14043	.	-	0	ID=cds-EGL39602.1;Parent=gene-HMPREF1039_1215;Dbxref=NCBI_GP:EGL39602.1;Name=EGL39602.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF1039_1215;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EGL39602.1;transl_table=11
AFIJ01000035.1	Genbank	gene	14036	14512	.	-	.	ID=gene-HMPREF1039_1216;Name=HMPREF1039_1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1216
AFIJ01000035.1	Genbank	CDS	14036	14512	.	-	0	ID=cds-EGL39621.1;Parent=gene-HMPREF1039_1216;Dbxref=NCBI_GP:EGL39621.1;Name=EGL39621.1;Note=identified by match to protein family HMM PF01047;gbkey=CDS;locus_tag=HMPREF1039_1216;product=transcriptional regulator%2C MarR family;protein_id=EGL39621.1;transl_table=11
AFIJ01000035.1	Genbank	gene	14911	16473	.	+	.	ID=gene-HMPREF1039_1217;Name=HMPREF1039_1217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1217
AFIJ01000035.1	Genbank	CDS	14911	16473	.	+	0	ID=cds-EGL39604.1;Parent=gene-HMPREF1039_1217;Dbxref=NCBI_GP:EGL39604.1;Name=EGL39604.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023;gbkey=CDS;locus_tag=HMPREF1039_1217;product=putative stage V sporulation protein B;protein_id=EGL39604.1;transl_table=11
AFIJ01000035.1	Genbank	gene	16678	18093	.	-	.	ID=gene-HMPREF1039_1218;Name=proY;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=HMPREF1039_1218
AFIJ01000035.1	Genbank	CDS	16678	18093	.	-	0	ID=cds-EGL39617.1;Parent=gene-HMPREF1039_1218;Dbxref=NCBI_GP:EGL39617.1;Name=EGL39617.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;gene=proY;locus_tag=HMPREF1039_1218;product=amino acid permease;protein_id=EGL39617.1;transl_table=11
AFIJ01000035.1	Genbank	gene	18107	19327	.	-	.	ID=gene-HMPREF1039_1219;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1219
AFIJ01000035.1	Genbank	CDS	18107	19327	.	-	0	ID=cds-EGL39625.1;Parent=gene-HMPREF1039_1219;Dbxref=NCBI_GP:EGL39625.1;Name=EGL39625.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM PF01842%3B match to protein family HMM TIGR01127;gbkey=CDS;gene=ilvA;locus_tag=HMPREF1039_1219;product=threonine ammonia-lyase;protein_id=EGL39625.1;transl_table=11
AFIJ01000035.1	Genbank	gene	19565	20344	.	-	.	ID=gene-HMPREF1039_1220;Name=HMPREF1039_1220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1220
AFIJ01000035.1	Genbank	CDS	19565	20344	.	-	0	ID=cds-EGL39645.1;Parent=gene-HMPREF1039_1220;Dbxref=NCBI_GP:EGL39645.1;Name=EGL39645.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00485;gbkey=CDS;locus_tag=HMPREF1039_1220;product=phosphoribulokinase/uridine kinase family protein;protein_id=EGL39645.1;transl_table=11
AFIJ01000035.1	Genbank	gene	20389	21204	.	-	.	ID=gene-HMPREF1039_1221;Name=HMPREF1039_1221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1221
AFIJ01000035.1	Genbank	CDS	20389	21204	.	-	0	ID=cds-EGL39648.1;Parent=gene-HMPREF1039_1221;Dbxref=NCBI_GP:EGL39648.1;Name=EGL39648.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1221;product=hypothetical protein;protein_id=EGL39648.1;transl_table=11
AFIJ01000035.1	Genbank	gene	21201	21320	.	-	.	ID=gene-HMPREF1039_1222;Name=HMPREF1039_1222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1222
AFIJ01000035.1	Genbank	CDS	21201	21320	.	-	0	ID=cds-EGL39649.1;Parent=gene-HMPREF1039_1222;Dbxref=NCBI_GP:EGL39649.1;Name=EGL39649.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1222;product=hypothetical protein;protein_id=EGL39649.1;transl_table=11
AFIJ01000035.1	Genbank	gene	21374	21997	.	-	.	ID=gene-HMPREF1039_1223;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF1039_1223
AFIJ01000035.1	Genbank	CDS	21374	21997	.	-	0	ID=cds-EGL39593.1;Parent=gene-HMPREF1039_1223;Dbxref=NCBI_GP:EGL39593.1;Name=EGL39593.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01091;gbkey=CDS;gene=upp;locus_tag=HMPREF1039_1223;product=uracil phosphoribosyltransferase;protein_id=EGL39593.1;transl_table=11
AFIJ01000035.1	Genbank	gene	22013	22453	.	-	.	ID=gene-HMPREF1039_1224;Name=rpiB;gbkey=Gene;gene=rpiB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1224
AFIJ01000035.1	Genbank	CDS	22013	22453	.	-	0	ID=cds-EGL39599.1;Parent=gene-HMPREF1039_1224;Dbxref=NCBI_GP:EGL39599.1;Name=EGL39599.1;Note=identified by match to protein family HMM PF02502%3B match to protein family HMM TIGR00689%3B match to protein family HMM TIGR01120;gbkey=CDS;gene=rpiB;locus_tag=HMPREF1039_1224;product=ribose-5-phosphate isomerase B;protein_id=EGL39599.1;transl_table=11
AFIJ01000035.1	Genbank	gene	22498	23544	.	-	.	ID=gene-HMPREF1039_1225;Name=HMPREF1039_1225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1225
AFIJ01000035.1	Genbank	CDS	22498	23544	.	-	0	ID=cds-EGL39638.1;Parent=gene-HMPREF1039_1225;Dbxref=NCBI_GP:EGL39638.1;Name=EGL39638.1;Note=identified by match to protein family HMM PF01300%3B match to protein family HMM PF03481%3B match to protein family HMM TIGR00057;gbkey=CDS;locus_tag=HMPREF1039_1225;product=Sua5/YciO/YrdC/YwlC family protein;protein_id=EGL39638.1;transl_table=11
AFIJ01000035.1	Genbank	gene	23534	24406	.	-	.	ID=gene-HMPREF1039_1226;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1226
AFIJ01000035.1	Genbank	CDS	23534	24406	.	-	0	ID=cds-EGL39606.1;Parent=gene-HMPREF1039_1226;Dbxref=NCBI_GP:EGL39606.1;Name=EGL39606.1;Note=identified by match to protein family HMM PF05175%3B match to protein family HMM TIGR00536%3B match to protein family HMM TIGR03534;gbkey=CDS;gene=prmC;locus_tag=HMPREF1039_1226;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=EGL39606.1;transl_table=11
AFIJ01000035.1	Genbank	gene	24399	25481	.	-	.	ID=gene-HMPREF1039_1227;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1227
AFIJ01000035.1	Genbank	CDS	24399	25481	.	-	0	ID=cds-EGL39608.1;Parent=gene-HMPREF1039_1227;Dbxref=NCBI_GP:EGL39608.1;Name=EGL39608.1;Note=identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00019;gbkey=CDS;gene=prfA;locus_tag=HMPREF1039_1227;product=peptide chain release factor 1;protein_id=EGL39608.1;transl_table=11
AFIJ01000035.1	Genbank	gene	25499	26380	.	-	.	ID=gene-HMPREF1039_1228;Name=HMPREF1039_1228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1228
AFIJ01000035.1	Genbank	CDS	25499	26380	.	-	0	ID=cds-EGL39607.1;Parent=gene-HMPREF1039_1228;Dbxref=NCBI_GP:EGL39607.1;Name=EGL39607.1;Note=identified by match to protein family HMM PF07136;gbkey=CDS;locus_tag=HMPREF1039_1228;product=hypothetical protein;protein_id=EGL39607.1;transl_table=11
AFIJ01000035.1	Genbank	gene	26455	26661	.	-	.	ID=gene-HMPREF1039_1229;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1229
AFIJ01000035.1	Genbank	CDS	26455	26661	.	-	0	ID=cds-EGL39629.1;Parent=gene-HMPREF1039_1229;Dbxref=NCBI_GP:EGL39629.1;Name=EGL39629.1;Note=identified by match to protein family HMM PF01197%3B match to protein family HMM TIGR00105;gbkey=CDS;gene=rpmE;locus_tag=HMPREF1039_1229;product=ribosomal protein L31;protein_id=EGL39629.1;transl_table=11
AFIJ01000035.1	Genbank	gene	26827	28458	.	-	.	ID=gene-HMPREF1039_1230;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=HMPREF1039_1230
AFIJ01000035.1	Genbank	CDS	26827	28458	.	-	0	ID=cds-EGL39600.1;Parent=gene-HMPREF1039_1230;Dbxref=NCBI_GP:EGL39600.1;Name=EGL39600.1;Note=identified by match to protein family HMM PF00118%3B match to protein family HMM TIGR02348;gbkey=CDS;gene=groL;locus_tag=HMPREF1039_1230;product=chaperonin GroL;protein_id=EGL39600.1;transl_table=11
AFIJ01000035.1	Genbank	gene	28497	28778	.	-	.	ID=gene-HMPREF1039_1231;Name=groS;gbkey=Gene;gene=groS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1231
AFIJ01000035.1	Genbank	CDS	28497	28778	.	-	0	ID=cds-EGL39611.1;Parent=gene-HMPREF1039_1231;Dbxref=NCBI_GP:EGL39611.1;Name=EGL39611.1;Note=identified by match to protein family HMM PF00166;gbkey=CDS;gene=groS;locus_tag=HMPREF1039_1231;product=chaperonin GroS;protein_id=EGL39611.1;transl_table=11
AFIJ01000035.1	Genbank	gene	28893	29486	.	-	.	ID=gene-HMPREF1039_1232;Name=HMPREF1039_1232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1232
AFIJ01000035.1	Genbank	CDS	28893	29486	.	-	0	ID=cds-EGL39639.1;Parent=gene-HMPREF1039_1232;Dbxref=NCBI_GP:EGL39639.1;Name=EGL39639.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF03861;gbkey=CDS;locus_tag=HMPREF1039_1232;product=response regulator receiver domain protein;protein_id=EGL39639.1;transl_table=11
AFIJ01000035.1	Genbank	gene	29461	30906	.	-	.	ID=gene-HMPREF1039_1233;Name=HMPREF1039_1233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1233
AFIJ01000035.1	Genbank	CDS	29461	30906	.	-	0	ID=cds-EGL39614.1;Parent=gene-HMPREF1039_1233;Dbxref=NCBI_GP:EGL39614.1;Name=EGL39614.1;Note=identified by match to protein family HMM PF02518%3B match to protein family HMM PF07568;gbkey=CDS;locus_tag=HMPREF1039_1233;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EGL39614.1;transl_table=11
AFIJ01000035.1	Genbank	gene	30928	31953	.	-	.	ID=gene-HMPREF1039_1234;Name=HMPREF1039_1234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1234
AFIJ01000035.1	Genbank	CDS	30928	31953	.	-	0	ID=cds-EGL39610.1;Parent=gene-HMPREF1039_1234;Dbxref=NCBI_GP:EGL39610.1;Name=EGL39610.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR00329%3B match to protein family HMM TIGR03723;gbkey=CDS;locus_tag=HMPREF1039_1234;product=putative glycoprotease GCP;protein_id=EGL39610.1;transl_table=11
AFIJ01000035.1	Genbank	gene	31972	32433	.	-	.	ID=gene-HMPREF1039_1235;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=HMPREF1039_1235
AFIJ01000035.1	Genbank	CDS	31972	32433	.	-	0	ID=cds-EGL39620.1;Parent=gene-HMPREF1039_1235;Dbxref=NCBI_GP:EGL39620.1;Name=EGL39620.1;Note=identified by match to protein family HMM PF00583%3B match to protein family HMM TIGR01575;gbkey=CDS;gene=rimI;locus_tag=HMPREF1039_1235;product=ribosomal-protein-alanine acetyltransferase;protein_id=EGL39620.1;transl_table=11
AFIJ01000035.1	Genbank	gene	32430	33131	.	-	.	ID=gene-HMPREF1039_1236;Name=yeaZ;gbkey=Gene;gene=yeaZ;gene_biotype=protein_coding;locus_tag=HMPREF1039_1236
AFIJ01000035.1	Genbank	CDS	32430	33131	.	-	0	ID=cds-EGL39636.1;Parent=gene-HMPREF1039_1236;Dbxref=NCBI_GP:EGL39636.1;Name=EGL39636.1;Note=identified by match to protein family HMM PF00814%3B match to protein family HMM TIGR03725;gbkey=CDS;gene=yeaZ;locus_tag=HMPREF1039_1236;product=universal bacterial protein YeaZ;protein_id=EGL39636.1;transl_table=11
AFIJ01000035.1	Genbank	gene	33115	33582	.	-	.	ID=gene-HMPREF1039_1237;Name=HMPREF1039_1237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1237
AFIJ01000035.1	Genbank	CDS	33115	33582	.	-	0	ID=cds-EGL39592.1;Parent=gene-HMPREF1039_1237;Dbxref=NCBI_GP:EGL39592.1;Name=EGL39592.1;Note=identified by match to protein family HMM PF02367%3B match to protein family HMM TIGR00150;gbkey=CDS;locus_tag=HMPREF1039_1237;product=hydrolase%2C P-loop family;protein_id=EGL39592.1;transl_table=11
AFIJ01000035.1	Genbank	gene	33593	34567	.	-	.	ID=gene-HMPREF1039_1238;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=HMPREF1039_1238
AFIJ01000035.1	Genbank	CDS	33593	34567	.	-	0	ID=cds-EGL39596.1;Parent=gene-HMPREF1039_1238;Dbxref=NCBI_GP:EGL39596.1;Name=EGL39596.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01379;gbkey=CDS;gene=thiL;locus_tag=HMPREF1039_1238;product=thiamine-phosphate kinase;protein_id=EGL39596.1;transl_table=11
AFIJ01000035.1	Genbank	gene	34702	36135	.	-	.	ID=gene-HMPREF1039_1239;Name=HMPREF1039_1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1239
AFIJ01000035.1	Genbank	CDS	34702	36135	.	-	0	ID=cds-EGL39616.1;Parent=gene-HMPREF1039_1239;Dbxref=NCBI_GP:EGL39616.1;Name=EGL39616.1;Note=identified by match to protein family HMM PF01814%3B match to protein family HMM PF04282%3B match to protein family HMM PF08984;gbkey=CDS;locus_tag=HMPREF1039_1239;product=hemerythrin HHE cation binding domain protein;protein_id=EGL39616.1;transl_table=11
AFIJ01000035.1	Genbank	gene	36324	37727	.	-	.	ID=gene-HMPREF1039_1240;Name=HMPREF1039_1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1240
AFIJ01000035.1	Genbank	CDS	36324	37727	.	-	0	ID=cds-EGL39595.1;Parent=gene-HMPREF1039_1240;Dbxref=NCBI_GP:EGL39595.1;Name=EGL39595.1;gbkey=CDS;locus_tag=HMPREF1039_1240;product=outer membrane autotransporter barrel domain protein;protein_id=EGL39595.1;transl_table=11
AFIJ01000035.1	Genbank	gene	37779	39197	.	-	.	ID=gene-HMPREF1039_1241;Name=HMPREF1039_1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1241
AFIJ01000035.1	Genbank	CDS	37779	39197	.	-	0	ID=cds-EGL39635.1;Parent=gene-HMPREF1039_1241;Dbxref=NCBI_GP:EGL39635.1;Name=EGL39635.1;gbkey=CDS;locus_tag=HMPREF1039_1241;product=outer membrane autotransporter barrel domain protein;protein_id=EGL39635.1;transl_table=11
AFIJ01000035.1	Genbank	gene	39270	39524	.	-	.	ID=gene-HMPREF1039_1242;Name=HMPREF1039_1242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1242
AFIJ01000035.1	Genbank	CDS	39270	39524	.	-	0	ID=cds-EGL39615.1;Parent=gene-HMPREF1039_1242;Dbxref=NCBI_GP:EGL39615.1;Name=EGL39615.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1242;product=hypothetical protein;protein_id=EGL39615.1;transl_table=11
AFIJ01000035.1	Genbank	gene	39596	40063	.	-	.	ID=gene-HMPREF1039_1243;Name=HMPREF1039_1243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1243
AFIJ01000035.1	Genbank	CDS	39596	40063	.	-	0	ID=cds-EGL39628.1;Parent=gene-HMPREF1039_1243;Dbxref=NCBI_GP:EGL39628.1;Name=EGL39628.1;gbkey=CDS;locus_tag=HMPREF1039_1243;product=hypothetical protein;protein_id=EGL39628.1;transl_table=11
AFIJ01000035.1	Genbank	gene	40154	41440	.	-	.	ID=gene-HMPREF1039_1244;Name=HMPREF1039_1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1244
AFIJ01000035.1	Genbank	CDS	40154	41440	.	-	0	ID=cds-EGL39594.1;Parent=gene-HMPREF1039_1244;Dbxref=NCBI_GP:EGL39594.1;Name=EGL39594.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1244;product=hypothetical protein;protein_id=EGL39594.1;transl_table=11
AFIJ01000035.1	Genbank	gene	41722	43233	.	-	.	ID=gene-HMPREF1039_1245;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1245
AFIJ01000035.1	Genbank	CDS	41722	43233	.	-	0	ID=cds-EGL39623.1;Parent=gene-HMPREF1039_1245;Dbxref=NCBI_GP:EGL39623.1;Name=EGL39623.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF01336%3B match to protein family HMM TIGR00499;gbkey=CDS;gene=lysS;locus_tag=HMPREF1039_1245;product=lysine--tRNA ligase;protein_id=EGL39623.1;transl_table=11
AFIJ01000035.1	Genbank	gene	43256	43741	.	-	.	ID=gene-HMPREF1039_1246;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1246
AFIJ01000035.1	Genbank	CDS	43256	43741	.	-	0	ID=cds-EGL39630.1;Parent=gene-HMPREF1039_1246;Dbxref=NCBI_GP:EGL39630.1;Name=EGL39630.1;Note=identified by match to protein family HMM PF01272%3B match to protein family HMM PF03449%3B match to protein family HMM TIGR01462;gbkey=CDS;gene=greA;locus_tag=HMPREF1039_1246;product=prokaryotic transcription elongation factor%2C GreA/GreB domain protein;protein_id=EGL39630.1;transl_table=11
AFIJ01000035.1	Genbank	gene	43854	44849	.	-	.	ID=gene-HMPREF1039_1247;Name=HMPREF1039_1247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1247
AFIJ01000035.1	Genbank	CDS	43854	44849	.	-	0	ID=cds-EGL39642.1;Parent=gene-HMPREF1039_1247;Dbxref=NCBI_GP:EGL39642.1;Name=EGL39642.1;Note=identified by match to protein family HMM PF01207%3B match to protein family HMM TIGR00737;gbkey=CDS;locus_tag=HMPREF1039_1247;product=TIM-barrel protein%2C nifR3 family;protein_id=EGL39642.1;transl_table=11
AFIJ01000035.1	Genbank	gene	44833	45597	.	-	.	ID=gene-HMPREF1039_1248;Name=coaX;gbkey=Gene;gene=coaX;gene_biotype=protein_coding;locus_tag=HMPREF1039_1248
AFIJ01000035.1	Genbank	CDS	44833	45597	.	-	0	ID=cds-EGL39609.1;Parent=gene-HMPREF1039_1248;Dbxref=NCBI_GP:EGL39609.1;Name=EGL39609.1;Note=identified by match to protein family HMM PF03309%3B match to protein family HMM TIGR00671;gbkey=CDS;gene=coaX;locus_tag=HMPREF1039_1248;product=pantothenate kinase%2C type III;protein_id=EGL39609.1;transl_table=11
AFIJ01000035.1	Genbank	gene	45734	46720	.	-	.	ID=gene-HMPREF1039_1249;Name=HMPREF1039_1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1249
AFIJ01000035.1	Genbank	CDS	45734	46720	.	-	0	ID=cds-EGL39613.1;Parent=gene-HMPREF1039_1249;Dbxref=NCBI_GP:EGL39613.1;Name=EGL39613.1;Note=identified by match to protein family HMM PF02237%3B match to protein family HMM PF03099%3B match to protein family HMM PF08279%3B match to protein family HMM TIGR00121;gbkey=CDS;locus_tag=HMPREF1039_1249;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=EGL39613.1;transl_table=11
AFIJ01000035.1	Genbank	gene	47030	48970	.	-	.	ID=gene-HMPREF1039_1250;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1250
AFIJ01000035.1	Genbank	CDS	47030	48970	.	-	0	ID=cds-EGL39644.1;Parent=gene-HMPREF1039_1250;Dbxref=NCBI_GP:EGL39644.1;Name=EGL39644.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01434%3B match to protein family HMM PF06480%3B match to protein family HMM TIGR01241;gbkey=CDS;gene=hflB;locus_tag=HMPREF1039_1250;product=ATP-dependent metallopeptidase HflB;protein_id=EGL39644.1;transl_table=11
AFIJ01000035.1	Genbank	gene	49077	49616	.	-	.	ID=gene-HMPREF1039_1251;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=HMPREF1039_1251
AFIJ01000035.1	Genbank	CDS	49077	49616	.	-	0	ID=cds-EGL39605.1;Parent=gene-HMPREF1039_1251;Dbxref=NCBI_GP:EGL39605.1;Name=EGL39605.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01203;gbkey=CDS;gene=hpt;locus_tag=HMPREF1039_1251;product=hypoxanthine phosphoribosyltransferase;protein_id=EGL39605.1;transl_table=11
AFIJ01000035.1	Genbank	gene	49600	50976	.	-	.	ID=gene-HMPREF1039_1252;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1252
AFIJ01000035.1	Genbank	CDS	49600	50976	.	-	0	ID=cds-EGL39598.1;Parent=gene-HMPREF1039_1252;Dbxref=NCBI_GP:EGL39598.1;Name=EGL39598.1;Note=identified by match to protein family HMM PF01171%3B match to protein family HMM PF09179%3B match to protein family HMM TIGR02432%3B match to protein family HMM TIGR02433;gbkey=CDS;gene=tilS;locus_tag=HMPREF1039_1252;product=tRNA(Ile)-lysidine synthetase;protein_id=EGL39598.1;transl_table=11
AFIJ01000035.1	Genbank	gene	50973	51905	.	-	.	ID=gene-HMPREF1039_1253;Name=HMPREF1039_1253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1253
AFIJ01000035.1	Genbank	CDS	50973	51905	.	-	0	ID=cds-EGL39643.1;Parent=gene-HMPREF1039_1253;Dbxref=NCBI_GP:EGL39643.1;Name=EGL39643.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;locus_tag=HMPREF1039_1253;product=Ppx/GppA phosphatase family protein;protein_id=EGL39643.1;transl_table=11
AFIJ01000035.1	Genbank	gene	52002	52433	.	-	.	ID=gene-HMPREF1039_1254;Name=HMPREF1039_1254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1254
AFIJ01000035.1	Genbank	CDS	52002	52433	.	-	0	ID=cds-EGL39637.1;Parent=gene-HMPREF1039_1254;Dbxref=NCBI_GP:EGL39637.1;Name=EGL39637.1;Note=identified by match to protein family HMM PF00575;gbkey=CDS;locus_tag=HMPREF1039_1254;product=S1 RNA binding domain protein;protein_id=EGL39637.1;transl_table=11
AFIJ01000035.1	Genbank	gene	52552	52890	.	-	.	ID=gene-HMPREF1039_1255;Name=HMPREF1039_1255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1255
AFIJ01000035.1	Genbank	CDS	52552	52890	.	-	0	ID=cds-EGL39634.1;Parent=gene-HMPREF1039_1255;Dbxref=NCBI_GP:EGL39634.1;Name=EGL39634.1;Note=identified by match to protein family HMM PF04977;gbkey=CDS;locus_tag=HMPREF1039_1255;product=septum formation initiator;protein_id=EGL39634.1;transl_table=11
AFIJ01000035.1	Genbank	gene	53052	54455	.	+	.	ID=gene-HMPREF1039_1256;Name=HMPREF1039_1256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1256
AFIJ01000035.1	Genbank	CDS	53052	54455	.	+	0	ID=cds-EGL39633.1;Parent=gene-HMPREF1039_1256;Dbxref=NCBI_GP:EGL39633.1;Name=EGL39633.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF1039_1256;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EGL39633.1;transl_table=11
AFIJ01000035.1	Genbank	gene	54476	54619	.	-	.	ID=gene-HMPREF1039_1257;Name=HMPREF1039_1257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1257
AFIJ01000035.1	Genbank	CDS	54476	54619	.	-	0	ID=cds-EGL39631.1;Parent=gene-HMPREF1039_1257;Dbxref=NCBI_GP:EGL39631.1;Name=EGL39631.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1257;product=hypothetical protein;protein_id=EGL39631.1;transl_table=11
AFIJ01000035.1	Genbank	binding_site	54852	54968	.	+	.	ID=id-AFIJ01000035.1:54852..54968;Note=FMN riboswitch (RFN element)%3B Rfam score 102.97;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050
AFIJ01000035.1	Genbank	gene	55087	55251	.	+	.	ID=gene-HMPREF1039_1259;Name=HMPREF1039_1259;end_range=55251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1259;partial=true
AFIJ01000035.1	Genbank	CDS	55087	55251	.	+	0	ID=cds-EGL39597.1;Parent=gene-HMPREF1039_1259;Dbxref=NCBI_GP:EGL39597.1;Name=EGL39597.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;end_range=55251,.;gbkey=CDS;locus_tag=HMPREF1039_1259;partial=true;product=putative riboflavin biosynthesis protein ribBA;protein_id=EGL39597.1;transl_table=11
##sequence-region AFIJ01000034.1 1 770
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000034.1	Genbank	region	1	770	.	+	.	ID=AFIJ01000034.1:1..770;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000034.1	Genbank	gene	1	701	.	-	.	ID=gene-HMPREF1039_1633;Name=HMPREF1039_1633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1633;partial=true;start_range=.,1
AFIJ01000034.1	Genbank	CDS	1	701	.	-	0	ID=cds-EGL39683.1;Parent=gene-HMPREF1039_1633;Dbxref=NCBI_GP:EGL39683.1;Name=EGL39683.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00009%3B match to protein family HMM TIGR00231;gbkey=CDS;locus_tag=HMPREF1039_1633;partial=true;product=GTP-binding domain protein;protein_id=EGL39683.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000033.1 1 81962
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000033.1	Genbank	region	1	81962	.	+	.	ID=AFIJ01000033.1:1..81962;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000033.1	Genbank	gene	1	5490	.	-	.	ID=gene-HMPREF1039_0957;Name=HMPREF1039_0957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0957;partial=true;start_range=.,1
AFIJ01000033.1	Genbank	CDS	1	5490	.	-	0	ID=cds-EGL39797.1;Parent=gene-HMPREF1039_0957;Dbxref=NCBI_GP:EGL39797.1;Name=EGL39797.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_0957;partial=true;product=Hep/Hag repeat protein;protein_id=EGL39797.1;start_range=.,1;transl_table=11
AFIJ01000033.1	Genbank	gene	5599	5742	.	-	.	ID=gene-HMPREF1039_0959;Name=HMPREF1039_0959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0959
AFIJ01000033.1	Genbank	CDS	5599	5742	.	-	0	ID=cds-EGL39770.1;Parent=gene-HMPREF1039_0959;Dbxref=NCBI_GP:EGL39770.1;Name=EGL39770.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0959;product=hypothetical protein;protein_id=EGL39770.1;transl_table=11
AFIJ01000033.1	Genbank	gene	5734	5937	.	+	.	ID=gene-HMPREF1039_0958;Name=HMPREF1039_0958;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0958
AFIJ01000033.1	Genbank	CDS	5734	5937	.	+	0	ID=cds-EGL39759.1;Parent=gene-HMPREF1039_0958;Dbxref=NCBI_GP:EGL39759.1;Name=EGL39759.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0958;product=hypothetical protein;protein_id=EGL39759.1;transl_table=11
AFIJ01000033.1	Genbank	gene	5912	6670	.	-	.	ID=gene-HMPREF1039_0960;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0960
AFIJ01000033.1	Genbank	CDS	5912	6670	.	-	0	ID=cds-EGL39755.1;Parent=gene-HMPREF1039_0960;Dbxref=NCBI_GP:EGL39755.1;Name=EGL39755.1;Note=identified by match to protein family HMM PF00121%3B match to protein family HMM TIGR00419;gbkey=CDS;gene=tpiA;locus_tag=HMPREF1039_0960;product=triose-phosphate isomerase;protein_id=EGL39755.1;transl_table=11
AFIJ01000033.1	Genbank	gene	6688	7869	.	-	.	ID=gene-HMPREF1039_0961;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=HMPREF1039_0961
AFIJ01000033.1	Genbank	CDS	6688	7869	.	-	0	ID=cds-EGL39769.1;Parent=gene-HMPREF1039_0961;Dbxref=NCBI_GP:EGL39769.1;Name=EGL39769.1;Note=identified by match to protein family HMM PF00162;gbkey=CDS;gene=pgk;locus_tag=HMPREF1039_0961;product=phosphoglycerate kinase;protein_id=EGL39769.1;transl_table=11
AFIJ01000033.1	Genbank	gene	7900	8925	.	-	.	ID=gene-HMPREF1039_0962;Name=HMPREF1039_0962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0962
AFIJ01000033.1	Genbank	CDS	7900	8925	.	-	0	ID=cds-EGL39778.1;Parent=gene-HMPREF1039_0962;Dbxref=NCBI_GP:EGL39778.1;Name=EGL39778.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800;gbkey=CDS;locus_tag=HMPREF1039_0962;product=glyceraldehyde 3-phosphate dehydrogenase domain protein;protein_id=EGL39778.1;transl_table=11
AFIJ01000033.1	Genbank	gene	8956	9120	.	-	.	ID=gene-HMPREF1039_0963;Name=HMPREF1039_0963;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0963
AFIJ01000033.1	Genbank	CDS	8956	9120	.	-	0	ID=cds-EGL39784.1;Parent=gene-HMPREF1039_0963;Dbxref=NCBI_GP:EGL39784.1;Name=EGL39784.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0963;product=hypothetical protein;protein_id=EGL39784.1;transl_table=11
AFIJ01000033.1	Genbank	gene	9098	10114	.	-	.	ID=gene-HMPREF1039_0964;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=HMPREF1039_0964
AFIJ01000033.1	Genbank	CDS	9098	10114	.	-	0	ID=cds-EGL39727.1;Parent=gene-HMPREF1039_0964;Dbxref=NCBI_GP:EGL39727.1;Name=EGL39727.1;Note=identified by match to protein family HMM PF00044%3B match to protein family HMM PF02800%3B match to protein family HMM TIGR01534;gbkey=CDS;gene=gap;locus_tag=HMPREF1039_0964;product=glyceraldehyde-3-phosphate dehydrogenase%2C type I;protein_id=EGL39727.1;transl_table=11
AFIJ01000033.1	Genbank	gene	10294	10698	.	-	.	ID=gene-HMPREF1039_0965;Name=HMPREF1039_0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0965
AFIJ01000033.1	Genbank	CDS	10294	10698	.	-	0	ID=cds-EGL39752.1;Parent=gene-HMPREF1039_0965;Dbxref=NCBI_GP:EGL39752.1;Name=EGL39752.1;gbkey=CDS;locus_tag=HMPREF1039_0965;product=hypothetical protein;protein_id=EGL39752.1;transl_table=11
AFIJ01000033.1	Genbank	gene	10892	11434	.	-	.	ID=gene-HMPREF1039_0966;Name=HMPREF1039_0966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0966
AFIJ01000033.1	Genbank	CDS	10892	11434	.	-	0	ID=cds-EGL39765.1;Parent=gene-HMPREF1039_0966;Dbxref=NCBI_GP:EGL39765.1;Name=EGL39765.1;gbkey=CDS;locus_tag=HMPREF1039_0966;product=hypothetical protein;protein_id=EGL39765.1;transl_table=11
AFIJ01000033.1	Genbank	gene	11538	12515	.	-	.	ID=gene-HMPREF1039_0967;Name=HMPREF1039_0967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0967
AFIJ01000033.1	Genbank	CDS	11538	12515	.	-	0	ID=cds-EGL39761.1;Parent=gene-HMPREF1039_0967;Dbxref=NCBI_GP:EGL39761.1;Name=EGL39761.1;Note=identified by match to protein family HMM PF03576;gbkey=CDS;locus_tag=HMPREF1039_0967;product=peptidase family T4;protein_id=EGL39761.1;transl_table=11
AFIJ01000033.1	Genbank	gene	12528	13052	.	-	.	ID=gene-HMPREF1039_0968;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HMPREF1039_0968
AFIJ01000033.1	Genbank	CDS	12528	13052	.	-	0	ID=cds-EGL39753.1;Parent=gene-HMPREF1039_0968;Dbxref=NCBI_GP:EGL39753.1;Name=EGL39753.1;Note=identified by match to protein family HMM TIGR02274;gbkey=CDS;gene=dcd;locus_tag=HMPREF1039_0968;product=dCTP deaminase;protein_id=EGL39753.1;transl_table=11
AFIJ01000033.1	Genbank	gene	13049	14323	.	-	.	ID=gene-HMPREF1039_0969;Name=HMPREF1039_0969;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0969
AFIJ01000033.1	Genbank	CDS	13049	14323	.	-	0	ID=cds-EGL39737.1;Parent=gene-HMPREF1039_0969;Dbxref=NCBI_GP:EGL39737.1;Name=EGL39737.1;gbkey=CDS;locus_tag=HMPREF1039_0969;product=tetratricopeptide repeat protein;protein_id=EGL39737.1;transl_table=11
AFIJ01000033.1	Genbank	gene	14310	16454	.	-	.	ID=gene-HMPREF1039_0970;Name=HMPREF1039_0970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0970
AFIJ01000033.1	Genbank	CDS	14310	16454	.	-	0	ID=cds-EGL39748.1;Parent=gene-HMPREF1039_0970;Dbxref=NCBI_GP:EGL39748.1;Name=EGL39748.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01056;gbkey=CDS;locus_tag=HMPREF1039_0970;product=DNA topoisomerase;protein_id=EGL39748.1;transl_table=11
AFIJ01000033.1	Genbank	gene	16451	18127	.	-	.	ID=gene-HMPREF1039_0971;Name=HMPREF1039_0971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0971
AFIJ01000033.1	Genbank	CDS	16451	18127	.	-	0	ID=cds-EGL39792.1;Parent=gene-HMPREF1039_0971;Dbxref=NCBI_GP:EGL39792.1;Name=EGL39792.1;gbkey=CDS;locus_tag=HMPREF1039_0971;product=hypothetical protein;protein_id=EGL39792.1;transl_table=11
AFIJ01000033.1	Genbank	gene	18219	18470	.	-	.	ID=gene-HMPREF1039_0972;Name=HMPREF1039_0972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0972
AFIJ01000033.1	Genbank	CDS	18219	18470	.	-	0	ID=cds-EGL39794.1;Parent=gene-HMPREF1039_0972;Dbxref=NCBI_GP:EGL39794.1;Name=EGL39794.1;gbkey=CDS;locus_tag=HMPREF1039_0972;product=hypothetical protein;protein_id=EGL39794.1;transl_table=11
AFIJ01000033.1	Genbank	gene	18467	19687	.	-	.	ID=gene-HMPREF1039_0973;Name=HMPREF1039_0973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0973
AFIJ01000033.1	Genbank	CDS	18467	19687	.	-	0	ID=cds-EGL39726.1;Parent=gene-HMPREF1039_0973;Dbxref=NCBI_GP:EGL39726.1;Name=EGL39726.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=HMPREF1039_0973;product=peptidase%2C U32 family;protein_id=EGL39726.1;transl_table=11
AFIJ01000033.1	Genbank	gene	19700	20290	.	-	.	ID=gene-HMPREF1039_0974;Name=HMPREF1039_0974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0974
AFIJ01000033.1	Genbank	CDS	19700	20290	.	-	0	ID=cds-EGL39783.1;Parent=gene-HMPREF1039_0974;Dbxref=NCBI_GP:EGL39783.1;Name=EGL39783.1;Note=identified by match to protein family HMM PF01596;gbkey=CDS;locus_tag=HMPREF1039_0974;product=O-methyltransferase;protein_id=EGL39783.1;transl_table=11
AFIJ01000033.1	Genbank	gene	20287	21324	.	-	.	ID=gene-HMPREF1039_0975;Name=HMPREF1039_0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0975
AFIJ01000033.1	Genbank	CDS	20287	21324	.	-	0	ID=cds-EGL39745.1;Parent=gene-HMPREF1039_0975;Dbxref=NCBI_GP:EGL39745.1;Name=EGL39745.1;Note=identified by match to protein family HMM PF02618%3B match to protein family HMM TIGR00247;gbkey=CDS;locus_tag=HMPREF1039_0975;product=YceG family protein;protein_id=EGL39745.1;transl_table=11
AFIJ01000033.1	Genbank	gene	21411	21539	.	-	.	ID=gene-HMPREF1039_0976;Name=HMPREF1039_0976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0976
AFIJ01000033.1	Genbank	CDS	21411	21539	.	-	0	ID=cds-EGL39795.1;Parent=gene-HMPREF1039_0976;Dbxref=NCBI_GP:EGL39795.1;Name=EGL39795.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0976;product=hypothetical protein;protein_id=EGL39795.1;transl_table=11
AFIJ01000033.1	Genbank	gene	21566	21925	.	-	.	ID=gene-HMPREF1039_0977;Name=HMPREF1039_0977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0977
AFIJ01000033.1	Genbank	CDS	21566	21925	.	-	0	ID=cds-EGL39725.1;Parent=gene-HMPREF1039_0977;Dbxref=NCBI_GP:EGL39725.1;Name=EGL39725.1;Note=identified by match to protein family HMM PF01476;gbkey=CDS;locus_tag=HMPREF1039_0977;product=LysM domain protein;protein_id=EGL39725.1;transl_table=11
AFIJ01000033.1	Genbank	gene	22095	22712	.	+	.	ID=gene-HMPREF1039_0978;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0978
AFIJ01000033.1	Genbank	CDS	22095	22712	.	+	0	ID=cds-EGL39728.1;Parent=gene-HMPREF1039_0978;Dbxref=NCBI_GP:EGL39728.1;Name=EGL39728.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM PF01726%3B match to protein family HMM TIGR00498;gbkey=CDS;gene=lexA;locus_tag=HMPREF1039_0978;product=repressor LexA;protein_id=EGL39728.1;transl_table=11
AFIJ01000033.1	Genbank	gene	22883	24166	.	-	.	ID=gene-HMPREF1039_0979;Name=HMPREF1039_0979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0979
AFIJ01000033.1	Genbank	CDS	22883	24166	.	-	0	ID=cds-EGL39743.1;Parent=gene-HMPREF1039_0979;Dbxref=NCBI_GP:EGL39743.1;Name=EGL39743.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969;gbkey=CDS;locus_tag=HMPREF1039_0979;product=amidohydrolase family protein;protein_id=EGL39743.1;transl_table=11
AFIJ01000033.1	Genbank	gene	24183	25424	.	-	.	ID=gene-HMPREF1039_0980;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=HMPREF1039_0980
AFIJ01000033.1	Genbank	CDS	24183	25424	.	-	0	ID=cds-EGL39733.1;Parent=gene-HMPREF1039_0980;Dbxref=NCBI_GP:EGL39733.1;Name=EGL39733.1;Note=identified by match to protein family HMM PF00670%3B match to protein family HMM PF05221%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00936;gbkey=CDS;gene=ahcY;locus_tag=HMPREF1039_0980;product=adenosylhomocysteinase;protein_id=EGL39733.1;transl_table=11
AFIJ01000033.1	Genbank	gene	25445	26506	.	-	.	ID=gene-HMPREF1039_0981;Name=mtnA;gbkey=Gene;gene=mtnA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0981
AFIJ01000033.1	Genbank	CDS	25445	26506	.	-	0	ID=cds-EGL39754.1;Parent=gene-HMPREF1039_0981;Dbxref=NCBI_GP:EGL39754.1;Name=EGL39754.1;Note=identified by match to protein family HMM PF01008%3B match to protein family HMM TIGR00512%3B match to protein family HMM TIGR00524;gbkey=CDS;gene=mtnA;locus_tag=HMPREF1039_0981;product=S-methyl-5-thioribose-1-phosphate isomerase;protein_id=EGL39754.1;transl_table=11
AFIJ01000033.1	Genbank	gene	26510	27304	.	-	.	ID=gene-HMPREF1039_0982;Name=mtnP;gbkey=Gene;gene=mtnP;gene_biotype=protein_coding;locus_tag=HMPREF1039_0982
AFIJ01000033.1	Genbank	CDS	26510	27304	.	-	0	ID=cds-EGL39721.1;Parent=gene-HMPREF1039_0982;Dbxref=NCBI_GP:EGL39721.1;Name=EGL39721.1;Note=identified by match to protein family HMM PF00896%3B match to protein family HMM TIGR01694;gbkey=CDS;gene=mtnP;locus_tag=HMPREF1039_0982;product=methylthioadenosine phosphorylase;protein_id=EGL39721.1;transl_table=11
AFIJ01000033.1	Genbank	gene	27307	28191	.	-	.	ID=gene-HMPREF1039_0983;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=HMPREF1039_0983
AFIJ01000033.1	Genbank	CDS	27307	28191	.	-	0	ID=cds-EGL39749.1;Parent=gene-HMPREF1039_0983;Dbxref=NCBI_GP:EGL39749.1;Name=EGL39749.1;Note=identified by match to protein family HMM PF01430;gbkey=CDS;gene=hslO;locus_tag=HMPREF1039_0983;product=chaperonin HslO;protein_id=EGL39749.1;transl_table=11
AFIJ01000033.1	Genbank	gene	28175	28411	.	-	.	ID=gene-HMPREF1039_0984;Name=HMPREF1039_0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0984
AFIJ01000033.1	Genbank	CDS	28175	28411	.	-	0	ID=cds-EGL39723.1;Parent=gene-HMPREF1039_0984;Dbxref=NCBI_GP:EGL39723.1;Name=EGL39723.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0984;product=hypothetical protein;protein_id=EGL39723.1;transl_table=11
AFIJ01000033.1	Genbank	gene	28449	28796	.	-	.	ID=gene-HMPREF1039_0985;Name=HMPREF1039_0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0985
AFIJ01000033.1	Genbank	CDS	28449	28796	.	-	0	ID=cds-EGL39762.1;Parent=gene-HMPREF1039_0985;Dbxref=NCBI_GP:EGL39762.1;Name=EGL39762.1;Note=identified by match to protein family HMM PF03960;gbkey=CDS;locus_tag=HMPREF1039_0985;product=ArsC family protein;protein_id=EGL39762.1;transl_table=11
AFIJ01000033.1	Genbank	gene	28807	29277	.	-	.	ID=gene-HMPREF1039_0986;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0986
AFIJ01000033.1	Genbank	CDS	28807	29277	.	-	0	ID=cds-EGL39776.1;Parent=gene-HMPREF1039_0986;Dbxref=NCBI_GP:EGL39776.1;Name=EGL39776.1;Note=identified by match to protein family HMM PF01668%3B match to protein family HMM TIGR00086;gbkey=CDS;gene=smpB;locus_tag=HMPREF1039_0986;product=SsrA-binding protein;protein_id=EGL39776.1;transl_table=11
AFIJ01000033.1	Genbank	gene	29290	31593	.	-	.	ID=gene-HMPREF1039_0987;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=HMPREF1039_0987
AFIJ01000033.1	Genbank	CDS	29290	31593	.	-	0	ID=cds-EGL39724.1;Parent=gene-HMPREF1039_0987;Dbxref=NCBI_GP:EGL39724.1;Name=EGL39724.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF00773%3B match to protein family HMM PF08206%3B match to protein family HMM TIGR00358%3B match to protein family HMM TIGR02063;gbkey=CDS;gene=rnr;locus_tag=HMPREF1039_0987;product=ribonuclease R;protein_id=EGL39724.1;transl_table=11
AFIJ01000033.1	Genbank	gene	31646	31882	.	-	.	ID=gene-HMPREF1039_0988;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0988
AFIJ01000033.1	Genbank	CDS	31646	31882	.	-	0	ID=cds-EGL39734.1;Parent=gene-HMPREF1039_0988;Dbxref=NCBI_GP:EGL39734.1;Name=EGL39734.1;Note=identified by match to protein family HMM PF03840%3B match to protein family HMM TIGR00810;gbkey=CDS;gene=secG;locus_tag=HMPREF1039_0988;product=preprotein translocase%2C SecG subunit;protein_id=EGL39734.1;transl_table=11
AFIJ01000033.1	Genbank	gene	31927	32616	.	-	.	ID=gene-HMPREF1039_0989;Name=sigH;gbkey=Gene;gene=sigH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0989
AFIJ01000033.1	Genbank	CDS	31927	32616	.	-	0	ID=cds-EGL39785.1;Parent=gene-HMPREF1039_0989;Dbxref=NCBI_GP:EGL39785.1;Name=EGL39785.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM TIGR02859%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=sigH;locus_tag=HMPREF1039_0989;product=RNA polymerase sigma-H factor;protein_id=EGL39785.1;transl_table=11
AFIJ01000033.1	Genbank	gene	32623	33162	.	-	.	ID=gene-HMPREF1039_0990;Name=HMPREF1039_0990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0990
AFIJ01000033.1	Genbank	CDS	32623	33162	.	-	0	ID=cds-EGL39760.1;Parent=gene-HMPREF1039_0990;Dbxref=NCBI_GP:EGL39760.1;Name=EGL39760.1;Note=identified by match to protein family HMM PF05991;gbkey=CDS;locus_tag=HMPREF1039_0990;product=hypothetical protein;protein_id=EGL39760.1;transl_table=11
AFIJ01000033.1	Genbank	gene	33159	33911	.	-	.	ID=gene-HMPREF1039_0991;Name=HMPREF1039_0991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0991
AFIJ01000033.1	Genbank	CDS	33159	33911	.	-	0	ID=cds-EGL39777.1;Parent=gene-HMPREF1039_0991;Dbxref=NCBI_GP:EGL39777.1;Name=EGL39777.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032%3B match to protein family HMM TIGR00186;gbkey=CDS;locus_tag=HMPREF1039_0991;product=RNA methyltransferase%2C TrmH family%2C group 3;protein_id=EGL39777.1;transl_table=11
AFIJ01000033.1	Genbank	gene	33920	34396	.	-	.	ID=gene-HMPREF1039_0992;Name=HMPREF1039_0992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0992
AFIJ01000033.1	Genbank	CDS	33920	34396	.	-	0	ID=cds-EGL39780.1;Parent=gene-HMPREF1039_0992;Dbxref=NCBI_GP:EGL39780.1;Name=EGL39780.1;Note=identified by match to protein family HMM PF00636;gbkey=CDS;locus_tag=HMPREF1039_0992;product=RNase3 domain protein;protein_id=EGL39780.1;transl_table=11
AFIJ01000033.1	Genbank	gene	34393	35838	.	-	.	ID=gene-HMPREF1039_0993;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0993
AFIJ01000033.1	Genbank	CDS	34393	35838	.	-	0	ID=cds-EGL39774.1;Parent=gene-HMPREF1039_0993;Dbxref=NCBI_GP:EGL39774.1;Name=EGL39774.1;Note=identified by match to protein family HMM PF01406%3B match to protein family HMM PF09190%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00435;gbkey=CDS;gene=cysS;locus_tag=HMPREF1039_0993;product=cysteine--tRNA ligase;protein_id=EGL39774.1;transl_table=11
AFIJ01000033.1	Genbank	sequence_feature	35885	36092	.	-	.	ID=id-AFIJ01000033.1:35885..36092;Note=T-box leader;gbkey=misc_feature
AFIJ01000033.1	Genbank	gene	36153	37610	.	-	.	ID=gene-HMPREF1039_0995;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=HMPREF1039_0995
AFIJ01000033.1	Genbank	CDS	36153	37610	.	-	0	ID=cds-EGL39739.1;Parent=gene-HMPREF1039_0995;Dbxref=NCBI_GP:EGL39739.1;Name=EGL39739.1;Note=identified by match to protein family HMM PF00749%3B match to protein family HMM TIGR00464;gbkey=CDS;gene=gltX;locus_tag=HMPREF1039_0995;product=glutamate--tRNA ligase;protein_id=EGL39739.1;transl_table=11
AFIJ01000033.1	Genbank	gene	37633	38814	.	-	.	ID=gene-HMPREF1039_0996;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0996
AFIJ01000033.1	Genbank	CDS	37633	38814	.	-	0	ID=cds-EGL39735.1;Parent=gene-HMPREF1039_0996;Dbxref=NCBI_GP:EGL39735.1;Name=EGL39735.1;Note=identified by match to protein family HMM PF01128%3B match to protein family HMM PF02542%3B match to protein family HMM TIGR00151%3B match to protein family HMM TIGR00453;gbkey=CDS;gene=ispF;locus_tag=HMPREF1039_0996;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=EGL39735.1;transl_table=11
AFIJ01000033.1	Genbank	gene	38822	40006	.	-	.	ID=gene-HMPREF1039_0997;Name=HMPREF1039_0997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0997
AFIJ01000033.1	Genbank	CDS	38822	40006	.	-	0	ID=cds-EGL39791.1;Parent=gene-HMPREF1039_0997;Dbxref=NCBI_GP:EGL39791.1;Name=EGL39791.1;Note=identified by match to protein family HMM PF01850%3B match to protein family HMM PF01938;gbkey=CDS;locus_tag=HMPREF1039_0997;product=PIN domain protein;protein_id=EGL39791.1;transl_table=11
AFIJ01000033.1	Genbank	gene	40098	41489	.	-	.	ID=gene-HMPREF1039_0998;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0998
AFIJ01000033.1	Genbank	CDS	40098	41489	.	-	0	ID=cds-EGL39764.1;Parent=gene-HMPREF1039_0998;Dbxref=NCBI_GP:EGL39764.1;Name=EGL39764.1;Note=identified by match to protein family HMM TIGR00416;gbkey=CDS;gene=radA;locus_tag=HMPREF1039_0998;product=DNA repair protein RadA;protein_id=EGL39764.1;transl_table=11
AFIJ01000033.1	Genbank	gene	41476	42522	.	-	.	ID=gene-HMPREF1039_0999;Name=HMPREF1039_0999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0999
AFIJ01000033.1	Genbank	CDS	41476	42522	.	-	0	ID=cds-EGL39751.1;Parent=gene-HMPREF1039_0999;Dbxref=NCBI_GP:EGL39751.1;Name=EGL39751.1;Note=identified by match to protein family HMM PF00217;gbkey=CDS;locus_tag=HMPREF1039_0999;product=ATP:guanido phosphotransferase%2C C-terminal catalytic domain protein;protein_id=EGL39751.1;transl_table=11
AFIJ01000033.1	Genbank	gene	42532	42981	.	-	.	ID=gene-HMPREF1039_1000;Name=HMPREF1039_1000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1000
AFIJ01000033.1	Genbank	CDS	42532	42981	.	-	0	ID=cds-EGL39742.1;Parent=gene-HMPREF1039_1000;Dbxref=NCBI_GP:EGL39742.1;Name=EGL39742.1;gbkey=CDS;locus_tag=HMPREF1039_1000;product=hypothetical protein;protein_id=EGL39742.1;transl_table=11
AFIJ01000033.1	Genbank	gene	42995	43450	.	-	.	ID=gene-HMPREF1039_1001;Name=HMPREF1039_1001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1001
AFIJ01000033.1	Genbank	CDS	42995	43450	.	-	0	ID=cds-EGL39788.1;Parent=gene-HMPREF1039_1001;Dbxref=NCBI_GP:EGL39788.1;Name=EGL39788.1;gbkey=CDS;locus_tag=HMPREF1039_1001;product=transcriptional repressor of CtsR;protein_id=EGL39788.1;transl_table=11
AFIJ01000033.1	Genbank	gene	43670	44233	.	+	.	ID=gene-HMPREF1039_1002;Name=HMPREF1039_1002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1002
AFIJ01000033.1	Genbank	CDS	43670	44233	.	+	0	ID=cds-EGL39789.1;Parent=gene-HMPREF1039_1002;Dbxref=NCBI_GP:EGL39789.1;Name=EGL39789.1;Note=identified by match to protein family HMM PF03358;gbkey=CDS;locus_tag=HMPREF1039_1002;product=flavin reductase;protein_id=EGL39789.1;transl_table=11
AFIJ01000033.1	Genbank	gene	44345	46243	.	+	.	ID=gene-HMPREF1039_1003;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1003
AFIJ01000033.1	Genbank	CDS	44345	46243	.	+	0	ID=cds-EGL39730.1;Parent=gene-HMPREF1039_1003;Dbxref=NCBI_GP:EGL39730.1;Name=EGL39730.1;Note=identified by match to protein family HMM PF02540%3B match to protein family HMM PF06508%3B match to protein family HMM TIGR00552;gbkey=CDS;gene=nadE;locus_tag=HMPREF1039_1003;product=NAD+ synthase;protein_id=EGL39730.1;transl_table=11
AFIJ01000033.1	Genbank	gene	46195	46374	.	-	.	ID=gene-HMPREF1039_1004;Name=HMPREF1039_1004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1004
AFIJ01000033.1	Genbank	CDS	46195	46374	.	-	0	ID=cds-EGL39796.1;Parent=gene-HMPREF1039_1004;Dbxref=NCBI_GP:EGL39796.1;Name=EGL39796.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1004;product=hypothetical protein;protein_id=EGL39796.1;transl_table=11
AFIJ01000033.1	Genbank	gene	46453	47190	.	-	.	ID=gene-HMPREF1039_1005;Name=HMPREF1039_1005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1005
AFIJ01000033.1	Genbank	CDS	46453	47190	.	-	0	ID=cds-EGL39746.1;Parent=gene-HMPREF1039_1005;Dbxref=NCBI_GP:EGL39746.1;Name=EGL39746.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07687;gbkey=CDS;locus_tag=HMPREF1039_1005;product=amidohydrolase;protein_id=EGL39746.1;transl_table=11
AFIJ01000033.1	Genbank	gene	47187	47642	.	-	.	ID=gene-HMPREF1039_1006;Name=HMPREF1039_1006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1006
AFIJ01000033.1	Genbank	CDS	47187	47642	.	-	0	ID=cds-EGL39758.1;Parent=gene-HMPREF1039_1006;Dbxref=NCBI_GP:EGL39758.1;Name=EGL39758.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1006;product=hypothetical protein;protein_id=EGL39758.1;transl_table=11
AFIJ01000033.1	Genbank	gene	47653	48447	.	-	.	ID=gene-HMPREF1039_1007;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1007
AFIJ01000033.1	Genbank	CDS	47653	48447	.	-	0	ID=cds-EGL39763.1;Parent=gene-HMPREF1039_1007;Dbxref=NCBI_GP:EGL39763.1;Name=EGL39763.1;Note=identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;locus_tag=HMPREF1039_1007;product=ribonuclease HII;protein_id=EGL39763.1;transl_table=11
AFIJ01000033.1	Genbank	gene	48444	49307	.	-	.	ID=gene-HMPREF1039_1008;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1008
AFIJ01000033.1	Genbank	CDS	48444	49307	.	-	0	ID=cds-EGL39775.1;Parent=gene-HMPREF1039_1008;Dbxref=NCBI_GP:EGL39775.1;Name=EGL39775.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03596;gbkey=CDS;gene=ylqF;locus_tag=HMPREF1039_1008;product=ribosome biogenesis GTP-binding protein YlqF;protein_id=EGL39775.1;transl_table=11
AFIJ01000033.1	Genbank	gene	49604	50068	.	-	.	ID=gene-HMPREF1039_1009;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=HMPREF1039_1009
AFIJ01000033.1	Genbank	CDS	49604	50068	.	-	0	ID=cds-EGL39722.1;Parent=gene-HMPREF1039_1009;Dbxref=NCBI_GP:EGL39722.1;Name=EGL39722.1;Note=identified by match to protein family HMM PF00885%3B match to protein family HMM TIGR00114;gbkey=CDS;gene=ribH;locus_tag=HMPREF1039_1009;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=EGL39722.1;transl_table=11
AFIJ01000033.1	Genbank	gene	50096	50746	.	-	.	ID=gene-HMPREF1039_1010;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1010
AFIJ01000033.1	Genbank	CDS	50096	50746	.	-	0	ID=cds-EGL39720.1;Parent=gene-HMPREF1039_1010;Dbxref=NCBI_GP:EGL39720.1;Name=EGL39720.1;Note=identified by match to protein family HMM PF00677%3B match to protein family HMM TIGR00187;gbkey=CDS;gene=ribE;locus_tag=HMPREF1039_1010;product=riboflavin synthase%2C alpha subunit;protein_id=EGL39720.1;transl_table=11
AFIJ01000033.1	Genbank	gene	50727	51863	.	-	.	ID=gene-HMPREF1039_1011;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1011
AFIJ01000033.1	Genbank	CDS	50727	51863	.	-	0	ID=cds-EGL39772.1;Parent=gene-HMPREF1039_1011;Dbxref=NCBI_GP:EGL39772.1;Name=EGL39772.1;Note=identified by match to protein family HMM PF00383%3B match to protein family HMM PF01872%3B match to protein family HMM TIGR00227%3B match to protein family HMM TIGR00326;gbkey=CDS;gene=ribD;locus_tag=HMPREF1039_1011;product=riboflavin biosynthesis protein RibD;protein_id=EGL39772.1;transl_table=11
AFIJ01000033.1	Genbank	binding_site	51952	52085	.	-	.	ID=id-AFIJ01000033.1:51952..52085;Note=FMN riboswitch (RFN element)%3B Rfam score 60.34;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050
AFIJ01000033.1	Genbank	gene	52157	52804	.	-	.	ID=gene-HMPREF1039_1013;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=HMPREF1039_1013
AFIJ01000033.1	Genbank	CDS	52157	52804	.	-	0	ID=cds-EGL39757.1;Parent=gene-HMPREF1039_1013;Dbxref=NCBI_GP:EGL39757.1;Name=EGL39757.1;Note=identified by match to protein family HMM PF00834%3B match to protein family HMM TIGR01163;gbkey=CDS;gene=rpe;locus_tag=HMPREF1039_1013;product=ribulose-phosphate 3-epimerase;protein_id=EGL39757.1;transl_table=11
AFIJ01000033.1	Genbank	gene	52806	53663	.	-	.	ID=gene-HMPREF1039_1014;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1014
AFIJ01000033.1	Genbank	CDS	52806	53663	.	-	0	ID=cds-EGL39786.1;Parent=gene-HMPREF1039_1014;Dbxref=NCBI_GP:EGL39786.1;Name=EGL39786.1;Note=identified by match to protein family HMM PF03193%3B match to protein family HMM TIGR00157;gbkey=CDS;gene=rsgA;locus_tag=HMPREF1039_1014;product=ribosome small subunit-dependent GTPase A;protein_id=EGL39786.1;transl_table=11
AFIJ01000033.1	Genbank	gene	53683	55626	.	-	.	ID=gene-HMPREF1039_1015;Name=HMPREF1039_1015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1015
AFIJ01000033.1	Genbank	CDS	53683	55626	.	-	0	ID=cds-EGL39782.1;Parent=gene-HMPREF1039_1015;Dbxref=NCBI_GP:EGL39782.1;Name=EGL39782.1;Note=identified by match to protein family HMM PF00069%3B match to protein family HMM PF03793%3B match to protein family HMM PF07714;gbkey=CDS;locus_tag=HMPREF1039_1015;product=kinase domain protein;protein_id=EGL39782.1;transl_table=11
AFIJ01000033.1	Genbank	gene	55634	56344	.	-	.	ID=gene-HMPREF1039_1016;Name=HMPREF1039_1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1016
AFIJ01000033.1	Genbank	CDS	55634	56344	.	-	0	ID=cds-EGL39790.1;Parent=gene-HMPREF1039_1016;Dbxref=NCBI_GP:EGL39790.1;Name=EGL39790.1;Note=identified by match to protein family HMM PF00481;gbkey=CDS;locus_tag=HMPREF1039_1016;product=protein phosphatase 2C;protein_id=EGL39790.1;transl_table=11
AFIJ01000033.1	Genbank	gene	56402	57439	.	-	.	ID=gene-HMPREF1039_1017;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=HMPREF1039_1017
AFIJ01000033.1	Genbank	CDS	56402	57439	.	-	0	ID=cds-EGL39732.1;Parent=gene-HMPREF1039_1017;Dbxref=NCBI_GP:EGL39732.1;Name=EGL39732.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR00048;gbkey=CDS;gene=rlmN;locus_tag=HMPREF1039_1017;product=23S rRNA m2A2503 methyltransferase;protein_id=EGL39732.1;transl_table=11
AFIJ01000033.1	Genbank	gene	57441	58769	.	-	.	ID=gene-HMPREF1039_1018;Name=sun;gbkey=Gene;gene=sun;gene_biotype=protein_coding;locus_tag=HMPREF1039_1018
AFIJ01000033.1	Genbank	CDS	57441	58769	.	-	0	ID=cds-EGL39750.1;Parent=gene-HMPREF1039_1018;Dbxref=NCBI_GP:EGL39750.1;Name=EGL39750.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM PF01189%3B match to protein family HMM TIGR00563;gbkey=CDS;gene=sun;locus_tag=HMPREF1039_1018;product=ribosomal RNA small subunit methyltransferase B;protein_id=EGL39750.1;transl_table=11
AFIJ01000033.1	Genbank	gene	58844	59782	.	-	.	ID=gene-HMPREF1039_1019;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=HMPREF1039_1019
AFIJ01000033.1	Genbank	CDS	58844	59782	.	-	0	ID=cds-EGL39798.1;Parent=gene-HMPREF1039_1019;Dbxref=NCBI_GP:EGL39798.1;Name=EGL39798.1;Note=identified by match to protein family HMM PF00551%3B match to protein family HMM PF02911%3B match to protein family HMM TIGR00460;gbkey=CDS;gene=fmt;locus_tag=HMPREF1039_1019;product=methionyl-tRNA formyltransferase;protein_id=EGL39798.1;transl_table=11
AFIJ01000033.1	Genbank	gene	59779	60243	.	-	.	ID=gene-HMPREF1039_1020;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=HMPREF1039_1020
AFIJ01000033.1	Genbank	CDS	59779	60243	.	-	0	ID=cds-EGL39768.1;Parent=gene-HMPREF1039_1020;Dbxref=NCBI_GP:EGL39768.1;Name=EGL39768.1;Note=identified by match to protein family HMM PF01327%3B match to protein family HMM TIGR00079;gbkey=CDS;gene=def;locus_tag=HMPREF1039_1020;product=peptide deformylase;protein_id=EGL39768.1;transl_table=11
AFIJ01000033.1	Genbank	gene	60320	62680	.	-	.	ID=gene-HMPREF1039_1021;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1021
AFIJ01000033.1	Genbank	CDS	60320	62680	.	-	0	ID=cds-EGL39793.1;Parent=gene-HMPREF1039_1021;Dbxref=NCBI_GP:EGL39793.1;Name=EGL39793.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00595;gbkey=CDS;gene=priA;locus_tag=HMPREF1039_1021;product=primosomal protein N';protein_id=EGL39793.1;transl_table=11
AFIJ01000033.1	Genbank	gene	62791	63984	.	-	.	ID=gene-HMPREF1039_1022;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1022
AFIJ01000033.1	Genbank	CDS	62791	63984	.	-	0	ID=cds-EGL39787.1;Parent=gene-HMPREF1039_1022;Dbxref=NCBI_GP:EGL39787.1;Name=EGL39787.1;Note=identified by match to protein family HMM PF00438%3B match to protein family HMM PF02772%3B match to protein family HMM PF02773%3B match to protein family HMM TIGR01034;gbkey=CDS;gene=metK;locus_tag=HMPREF1039_1022;product=methionine adenosyltransferase;protein_id=EGL39787.1;transl_table=11
AFIJ01000033.1	Genbank	binding_site	64037	64138	.	-	.	ID=id-AFIJ01000033.1:64037..64138;Note=SAM riboswitch (S box leader)%3B Rfam score 66.51;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162
AFIJ01000033.1	Genbank	gene	64195	65424	.	-	.	ID=gene-HMPREF1039_1024;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1024
AFIJ01000033.1	Genbank	CDS	64195	65424	.	-	0	ID=cds-EGL39766.1;Parent=gene-HMPREF1039_1024;Dbxref=NCBI_GP:EGL39766.1;Name=EGL39766.1;Note=identified by match to protein family HMM PF02441%3B match to protein family HMM PF04127%3B match to protein family HMM TIGR00521;gbkey=CDS;gene=coaBC;locus_tag=HMPREF1039_1024;product=phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase;protein_id=EGL39766.1;transl_table=11
AFIJ01000033.1	Genbank	gene	65442	65651	.	-	.	ID=gene-HMPREF1039_1025;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=HMPREF1039_1025
AFIJ01000033.1	Genbank	CDS	65442	65651	.	-	0	ID=cds-EGL39756.1;Parent=gene-HMPREF1039_1025;Dbxref=NCBI_GP:EGL39756.1;Name=EGL39756.1;Note=identified by match to protein family HMM PF01192%3B match to protein family HMM TIGR00690;gbkey=CDS;gene=rpoZ;locus_tag=HMPREF1039_1025;product=DNA-directed RNA polymerase%2C omega subunit;protein_id=EGL39756.1;transl_table=11
AFIJ01000033.1	Genbank	gene	65669	66286	.	-	.	ID=gene-HMPREF1039_1026;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=HMPREF1039_1026
AFIJ01000033.1	Genbank	CDS	65669	66286	.	-	0	ID=cds-EGL39731.1;Parent=gene-HMPREF1039_1026;Dbxref=NCBI_GP:EGL39731.1;Name=EGL39731.1;Note=identified by match to protein family HMM PF00625%3B match to protein family HMM TIGR03263;gbkey=CDS;gene=gmk;locus_tag=HMPREF1039_1026;product=guanylate kinase;protein_id=EGL39731.1;transl_table=11
AFIJ01000033.1	Genbank	gene	66289	66573	.	-	.	ID=gene-HMPREF1039_1027;Name=HMPREF1039_1027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1027
AFIJ01000033.1	Genbank	CDS	66289	66573	.	-	0	ID=cds-EGL39741.1;Parent=gene-HMPREF1039_1027;Dbxref=NCBI_GP:EGL39741.1;Name=EGL39741.1;Note=identified by match to protein family HMM PF04025;gbkey=CDS;locus_tag=HMPREF1039_1027;product=hypothetical protein;protein_id=EGL39741.1;transl_table=11
AFIJ01000033.1	Genbank	gene	66583	67473	.	-	.	ID=gene-HMPREF1039_1028;Name=HMPREF1039_1028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1028
AFIJ01000033.1	Genbank	CDS	66583	67473	.	-	0	ID=cds-EGL39744.1;Parent=gene-HMPREF1039_1028;Dbxref=NCBI_GP:EGL39744.1;Name=EGL39744.1;Note=identified by match to protein family HMM PF03755%3B match to protein family HMM PF08340%3B match to protein family HMM TIGR00255;gbkey=CDS;locus_tag=HMPREF1039_1028;product=TIGR00255-like family protein;protein_id=EGL39744.1;transl_table=11
AFIJ01000033.1	Genbank	gene	67702	69096	.	+	.	ID=gene-HMPREF1039_1029;Name=pbuO;gbkey=Gene;gene=pbuO;gene_biotype=protein_coding;locus_tag=HMPREF1039_1029
AFIJ01000033.1	Genbank	CDS	67702	69096	.	+	0	ID=cds-EGL39771.1;Parent=gene-HMPREF1039_1029;Dbxref=NCBI_GP:EGL39771.1;Name=EGL39771.1;Note=identified by match to protein family HMM PF00860;gbkey=CDS;gene=pbuO;locus_tag=HMPREF1039_1029;product=putative permease;protein_id=EGL39771.1;transl_table=11
AFIJ01000033.1	Genbank	gene	69504	71636	.	-	.	ID=gene-HMPREF1039_1030;Name=HMPREF1039_1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1030
AFIJ01000033.1	Genbank	CDS	69504	71636	.	-	0	ID=cds-EGL39767.1;Parent=gene-HMPREF1039_1030;Dbxref=NCBI_GP:EGL39767.1;Name=EGL39767.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1030;product=Hep/Hag repeat protein;protein_id=EGL39767.1;transl_table=11
AFIJ01000033.1	Genbank	gene	72189	73853	.	-	.	ID=gene-HMPREF1039_1031;Name=HMPREF1039_1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1031
AFIJ01000033.1	Genbank	CDS	72189	73853	.	-	0	ID=cds-EGL39736.1;Parent=gene-HMPREF1039_1031;Dbxref=NCBI_GP:EGL39736.1;Name=EGL39736.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF1039_1031;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EGL39736.1;transl_table=11
AFIJ01000033.1	Genbank	gene	73843	74523	.	-	.	ID=gene-HMPREF1039_1032;Name=HMPREF1039_1032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1032
AFIJ01000033.1	Genbank	CDS	73843	74523	.	-	0	ID=cds-EGL39729.1;Parent=gene-HMPREF1039_1032;Dbxref=NCBI_GP:EGL39729.1;Name=EGL39729.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF1039_1032;product=response regulator receiver domain protein;protein_id=EGL39729.1;transl_table=11
AFIJ01000033.1	Genbank	gene	74498	75169	.	-	.	ID=gene-HMPREF1039_1033;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=HMPREF1039_1033
AFIJ01000033.1	Genbank	CDS	74498	75169	.	-	0	ID=cds-EGL39738.1;Parent=gene-HMPREF1039_1033;Dbxref=NCBI_GP:EGL39738.1;Name=EGL39738.1;Note=identified by match to protein family HMM PF01895%3B match to protein family HMM TIGR02135;gbkey=CDS;gene=phoU;locus_tag=HMPREF1039_1033;product=phosphate transport system regulatory protein PhoU;protein_id=EGL39738.1;transl_table=11
AFIJ01000033.1	Genbank	gene	75169	75945	.	-	.	ID=gene-HMPREF1039_1034;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1034
AFIJ01000033.1	Genbank	CDS	75169	75945	.	-	0	ID=cds-EGL39747.1;Parent=gene-HMPREF1039_1034;Dbxref=NCBI_GP:EGL39747.1;Name=EGL39747.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00972;gbkey=CDS;gene=pstB;locus_tag=HMPREF1039_1034;product=phosphate ABC transporter%2C ATP-binding protein;protein_id=EGL39747.1;transl_table=11
AFIJ01000033.1	Genbank	gene	75946	76806	.	-	.	ID=gene-HMPREF1039_1035;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1035
AFIJ01000033.1	Genbank	CDS	75946	76806	.	-	0	ID=cds-EGL39781.1;Parent=gene-HMPREF1039_1035;Dbxref=NCBI_GP:EGL39781.1;Name=EGL39781.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR00974;gbkey=CDS;gene=pstA;locus_tag=HMPREF1039_1035;product=phosphate ABC transporter%2C permease protein PstA;protein_id=EGL39781.1;transl_table=11
AFIJ01000033.1	Genbank	gene	76810	77676	.	-	.	ID=gene-HMPREF1039_1036;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1036
AFIJ01000033.1	Genbank	CDS	76810	77676	.	-	0	ID=cds-EGL39779.1;Parent=gene-HMPREF1039_1036;Dbxref=NCBI_GP:EGL39779.1;Name=EGL39779.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR02138;gbkey=CDS;gene=pstC;locus_tag=HMPREF1039_1036;product=phosphate ABC transporter%2C permease protein PstC;protein_id=EGL39779.1;transl_table=11
AFIJ01000033.1	Genbank	gene	77741	78586	.	-	.	ID=gene-HMPREF1039_1037;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1037
AFIJ01000033.1	Genbank	CDS	77741	78586	.	-	0	ID=cds-EGL39740.1;Parent=gene-HMPREF1039_1037;Dbxref=NCBI_GP:EGL39740.1;Name=EGL39740.1;Note=identified by match to protein family HMM PF01547%3B match to protein family HMM TIGR02136;gbkey=CDS;gene=pstS;locus_tag=HMPREF1039_1037;product=phosphate binding protein;protein_id=EGL39740.1;transl_table=11
AFIJ01000033.1	Genbank	gene	80748	81962	.	-	.	ID=gene-HMPREF1039_1038;Name=HMPREF1039_1038;end_range=81962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1038;partial=true
AFIJ01000033.1	Genbank	CDS	80748	81962	.	-	0	ID=cds-EGL39773.1;Parent=gene-HMPREF1039_1038;Dbxref=NCBI_GP:EGL39773.1;Name=EGL39773.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF03764;end_range=81962,.;gbkey=CDS;locus_tag=HMPREF1039_1038;partial=true;product=elongation factor Tu domain 2;protein_id=EGL39773.1;transl_table=11
##sequence-region AFIJ01000032.1 1 123176
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000032.1	Genbank	region	1	123176	.	+	.	ID=AFIJ01000032.1:1..123176;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000032.1	Genbank	gene	1	335	.	-	.	ID=gene-HMPREF1039_0292;Name=HMPREF1039_0292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0292;partial=true;start_range=.,1
AFIJ01000032.1	Genbank	CDS	1	335	.	-	0	ID=cds-EGL39884.1;Parent=gene-HMPREF1039_0292;Dbxref=NCBI_GP:EGL39884.1;Name=EGL39884.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01624;gbkey=CDS;locus_tag=HMPREF1039_0292;partial=true;product=MutS domain I protein;protein_id=EGL39884.1;start_range=.,1;transl_table=11
AFIJ01000032.1	Genbank	gene	346	1674	.	-	.	ID=gene-HMPREF1039_0293;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0293
AFIJ01000032.1	Genbank	CDS	346	1674	.	-	0	ID=cds-EGL39883.1;Parent=gene-HMPREF1039_0293;Dbxref=NCBI_GP:EGL39883.1;Name=EGL39883.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF01938%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01574;gbkey=CDS;gene=miaB;locus_tag=HMPREF1039_0293;product=tRNA-i(6)A37 thiotransferase enzyme MiaB;protein_id=EGL39883.1;transl_table=11
AFIJ01000032.1	Genbank	gene	1773	2324	.	-	.	ID=gene-HMPREF1039_0294;Name=HMPREF1039_0294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0294
AFIJ01000032.1	Genbank	CDS	1773	2324	.	-	0	ID=cds-EGL39914.1;Parent=gene-HMPREF1039_0294;Dbxref=NCBI_GP:EGL39914.1;Name=EGL39914.1;Note=identified by match to protein family HMM PF00156;gbkey=CDS;locus_tag=HMPREF1039_0294;product=phosphoribosyl transferase domain protein;protein_id=EGL39914.1;transl_table=11
AFIJ01000032.1	Genbank	gene	2377	3087	.	-	.	ID=gene-HMPREF1039_0295;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0295
AFIJ01000032.1	Genbank	CDS	2377	3087	.	-	0	ID=cds-EGL39841.1;Parent=gene-HMPREF1039_0295;Dbxref=NCBI_GP:EGL39841.1;Name=EGL39841.1;Note=identified by match to protein family HMM PF00902%3B match to protein family HMM TIGR00945;gbkey=CDS;gene=tatC;locus_tag=HMPREF1039_0295;product=twin arginine-targeting protein translocase TatC;protein_id=EGL39841.1;transl_table=11
AFIJ01000032.1	Genbank	gene	3071	3298	.	-	.	ID=gene-HMPREF1039_0296;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0296
AFIJ01000032.1	Genbank	CDS	3071	3298	.	-	0	ID=cds-EGL39931.1;Parent=gene-HMPREF1039_0296;Dbxref=NCBI_GP:EGL39931.1;Name=EGL39931.1;Note=identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411;gbkey=CDS;gene=tatA;locus_tag=HMPREF1039_0296;product=twin arginine-targeting protein translocase%2C TatA/E family;protein_id=EGL39931.1;transl_table=11
AFIJ01000032.1	Genbank	gene	3363	3447	.	-	.	ID=gene-HMPREF1039_0297;Name=HMPREF1039_0297;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0297
AFIJ01000032.1	Genbank	tRNA	3363	3447	.	-	.	ID=rna-HMPREF1039_0297;Parent=gene-HMPREF1039_0297;gbkey=tRNA;locus_tag=HMPREF1039_0297;product=tRNA-Leu
AFIJ01000032.1	Genbank	exon	3363	3447	.	-	.	ID=exon-HMPREF1039_0297-1;Parent=rna-HMPREF1039_0297;gbkey=tRNA;locus_tag=HMPREF1039_0297;product=tRNA-Leu
AFIJ01000032.1	Genbank	gene	3700	4410	.	-	.	ID=gene-HMPREF1039_0298;Name=HMPREF1039_0298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0298
AFIJ01000032.1	Genbank	CDS	3700	4410	.	-	0	ID=cds-EGL39863.1;Parent=gene-HMPREF1039_0298;Dbxref=NCBI_GP:EGL39863.1;Name=EGL39863.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF1039_0298;product=SNARE-like domain protein;protein_id=EGL39863.1;transl_table=11
AFIJ01000032.1	Genbank	gene	4511	5518	.	-	.	ID=gene-HMPREF1039_0299;Name=HMPREF1039_0299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0299
AFIJ01000032.1	Genbank	CDS	4511	5518	.	-	0	ID=cds-EGL39935.1;Parent=gene-HMPREF1039_0299;Dbxref=NCBI_GP:EGL39935.1;Name=EGL39935.1;Note=identified by match to protein family HMM PF03595;gbkey=CDS;locus_tag=HMPREF1039_0299;product=C4-dicarboxylate transporter/malic acid transport protein;protein_id=EGL39935.1;transl_table=11
AFIJ01000032.1	Genbank	gene	5585	6382	.	-	.	ID=gene-HMPREF1039_0300;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0300
AFIJ01000032.1	Genbank	CDS	5585	6382	.	-	0	ID=cds-EGL39879.1;Parent=gene-HMPREF1039_0300;Dbxref=NCBI_GP:EGL39879.1;Name=EGL39879.1;Note=identified by match to protein family HMM PF01416%3B match to protein family HMM TIGR00071;gbkey=CDS;gene=truA;locus_tag=HMPREF1039_0300;product=tRNA pseudouridine synthase A;protein_id=EGL39879.1;transl_table=11
AFIJ01000032.1	Genbank	gene	6370	7170	.	-	.	ID=gene-HMPREF1039_0301;Name=HMPREF1039_0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0301
AFIJ01000032.1	Genbank	CDS	6370	7170	.	-	0	ID=cds-EGL39917.1;Parent=gene-HMPREF1039_0301;Dbxref=NCBI_GP:EGL39917.1;Name=EGL39917.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF1039_0301;product=cobalt transport protein;protein_id=EGL39917.1;transl_table=11
AFIJ01000032.1	Genbank	gene	7160	8029	.	-	.	ID=gene-HMPREF1039_0302;Name=HMPREF1039_0302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0302
AFIJ01000032.1	Genbank	CDS	7160	8029	.	-	0	ID=cds-EGL39904.1;Parent=gene-HMPREF1039_0302;Dbxref=NCBI_GP:EGL39904.1;Name=EGL39904.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0302;product=ABC transporter%2C ATP-binding protein;protein_id=EGL39904.1;transl_table=11
AFIJ01000032.1	Genbank	gene	8020	8853	.	-	.	ID=gene-HMPREF1039_0303;Name=HMPREF1039_0303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0303
AFIJ01000032.1	Genbank	CDS	8020	8853	.	-	0	ID=cds-EGL39906.1;Parent=gene-HMPREF1039_0303;Dbxref=NCBI_GP:EGL39906.1;Name=EGL39906.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0303;product=cobalt ABC transporter%2C ATP-binding protein;protein_id=EGL39906.1;transl_table=11
AFIJ01000032.1	Genbank	gene	8946	9494	.	-	.	ID=gene-HMPREF1039_0304;Name=HMPREF1039_0304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0304
AFIJ01000032.1	Genbank	CDS	8946	9494	.	-	0	ID=cds-EGL39858.1;Parent=gene-HMPREF1039_0304;Dbxref=NCBI_GP:EGL39858.1;Name=EGL39858.1;gbkey=CDS;locus_tag=HMPREF1039_0304;product=hypothetical protein;protein_id=EGL39858.1;transl_table=11
AFIJ01000032.1	Genbank	gene	9681	10187	.	-	.	ID=gene-HMPREF1039_0305;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0305
AFIJ01000032.1	Genbank	CDS	9681	10187	.	-	0	ID=cds-EGL39928.1;Parent=gene-HMPREF1039_0305;Dbxref=NCBI_GP:EGL39928.1;Name=EGL39928.1;Note=identified by match to protein family HMM TIGR02491;gbkey=CDS;gene=nrdG;locus_tag=HMPREF1039_0305;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=EGL39928.1;transl_table=11
AFIJ01000032.1	Genbank	gene	10199	12349	.	-	.	ID=gene-HMPREF1039_0306;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0306
AFIJ01000032.1	Genbank	CDS	10199	12349	.	-	0	ID=cds-EGL39922.1;Parent=gene-HMPREF1039_0306;Dbxref=NCBI_GP:EGL39922.1;Name=EGL39922.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF03477%3B match to protein family HMM TIGR02487;gbkey=CDS;gene=nrdD;locus_tag=HMPREF1039_0306;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=EGL39922.1;transl_table=11
AFIJ01000032.1	Genbank	gene	12585	13295	.	-	.	ID=gene-HMPREF1039_0307;Name=HMPREF1039_0307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0307
AFIJ01000032.1	Genbank	CDS	12585	13295	.	-	0	ID=cds-EGL39852.1;Parent=gene-HMPREF1039_0307;Dbxref=NCBI_GP:EGL39852.1;Name=EGL39852.1;Note=identified by match to protein family HMM PF00899;gbkey=CDS;locus_tag=HMPREF1039_0307;product=ThiF family protein;protein_id=EGL39852.1;transl_table=11
AFIJ01000032.1	Genbank	gene	13292	13660	.	-	.	ID=gene-HMPREF1039_0308;Name=HMPREF1039_0308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0308
AFIJ01000032.1	Genbank	CDS	13292	13660	.	-	0	ID=cds-EGL39893.1;Parent=gene-HMPREF1039_0308;Dbxref=NCBI_GP:EGL39893.1;Name=EGL39893.1;Note=identified by match to protein family HMM PF00903;gbkey=CDS;locus_tag=HMPREF1039_0308;product=glyoxalase family protein;protein_id=EGL39893.1;transl_table=11
AFIJ01000032.1	Genbank	gene	13695	15278	.	-	.	ID=gene-HMPREF1039_0309;Name=HMPREF1039_0309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0309
AFIJ01000032.1	Genbank	CDS	13695	15278	.	-	0	ID=cds-EGL39880.1;Parent=gene-HMPREF1039_0309;Dbxref=NCBI_GP:EGL39880.1;Name=EGL39880.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0309;product=hypothetical protein;protein_id=EGL39880.1;transl_table=11
AFIJ01000032.1	Genbank	gene	15292	16740	.	-	.	ID=gene-HMPREF1039_0310;Name=HMPREF1039_0310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0310
AFIJ01000032.1	Genbank	CDS	15292	16740	.	-	0	ID=cds-EGL39870.1;Parent=gene-HMPREF1039_0310;Dbxref=NCBI_GP:EGL39870.1;Name=EGL39870.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0310;product=hypothetical protein;protein_id=EGL39870.1;transl_table=11
AFIJ01000032.1	Genbank	gene	16737	17885	.	-	.	ID=gene-HMPREF1039_0311;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0311
AFIJ01000032.1	Genbank	CDS	16737	17885	.	-	0	ID=cds-EGL39887.1;Parent=gene-HMPREF1039_0311;Dbxref=NCBI_GP:EGL39887.1;Name=EGL39887.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00619;gbkey=CDS;gene=sbcD;locus_tag=HMPREF1039_0311;product=exonuclease SbcCD%2C D subunit;protein_id=EGL39887.1;transl_table=11
AFIJ01000032.1	Genbank	gene	17950	18360	.	-	.	ID=gene-HMPREF1039_0312;Name=HMPREF1039_0312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0312
AFIJ01000032.1	Genbank	CDS	17950	18360	.	-	0	ID=cds-EGL39875.1;Parent=gene-HMPREF1039_0312;Dbxref=NCBI_GP:EGL39875.1;Name=EGL39875.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF1039_0312;product=transcriptional regulator%2C Fur family;protein_id=EGL39875.1;transl_table=11
AFIJ01000032.1	Genbank	gene	18415	18546	.	-	.	ID=gene-HMPREF1039_0313;Name=HMPREF1039_0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0313
AFIJ01000032.1	Genbank	CDS	18415	18546	.	-	0	ID=cds-EGL39859.1;Parent=gene-HMPREF1039_0313;Dbxref=NCBI_GP:EGL39859.1;Name=EGL39859.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0313;product=hypothetical protein;protein_id=EGL39859.1;transl_table=11
AFIJ01000032.1	Genbank	gene	18625	18716	.	-	.	ID=gene-HMPREF1039_0314;Name=HMPREF1039_0314;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0314
AFIJ01000032.1	Genbank	tRNA	18625	18716	.	-	.	ID=rna-HMPREF1039_0314;Parent=gene-HMPREF1039_0314;gbkey=tRNA;locus_tag=HMPREF1039_0314;product=tRNA-Ser
AFIJ01000032.1	Genbank	exon	18625	18716	.	-	.	ID=exon-HMPREF1039_0314-1;Parent=rna-HMPREF1039_0314;gbkey=tRNA;locus_tag=HMPREF1039_0314;product=tRNA-Ser
AFIJ01000032.1	Genbank	gene	18757	18833	.	-	.	ID=gene-HMPREF1039_0315;Name=HMPREF1039_0315;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0315
AFIJ01000032.1	Genbank	tRNA	18757	18833	.	-	.	ID=rna-HMPREF1039_0315;Parent=gene-HMPREF1039_0315;gbkey=tRNA;locus_tag=HMPREF1039_0315;product=tRNA-Pro
AFIJ01000032.1	Genbank	exon	18757	18833	.	-	.	ID=exon-HMPREF1039_0315-1;Parent=rna-HMPREF1039_0315;gbkey=tRNA;locus_tag=HMPREF1039_0315;product=tRNA-Pro
AFIJ01000032.1	Genbank	gene	18878	19591	.	-	.	ID=gene-HMPREF1039_0316;Name=HMPREF1039_0316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0316
AFIJ01000032.1	Genbank	CDS	18878	19591	.	-	0	ID=cds-EGL39855.1;Parent=gene-HMPREF1039_0316;Dbxref=NCBI_GP:EGL39855.1;Name=EGL39855.1;Note=identified by match to protein family HMM PF03741%3B match to protein family HMM TIGR03717;gbkey=CDS;locus_tag=HMPREF1039_0316;product=integral membrane protein%2C YjbE family;protein_id=EGL39855.1;transl_table=11
AFIJ01000032.1	Genbank	gene	19759	21177	.	-	.	ID=gene-HMPREF1039_0317;Name=HMPREF1039_0317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0317
AFIJ01000032.1	Genbank	CDS	19759	21177	.	-	0	ID=cds-EGL39915.1;Parent=gene-HMPREF1039_0317;Dbxref=NCBI_GP:EGL39915.1;Name=EGL39915.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF1039_0317;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EGL39915.1;transl_table=11
AFIJ01000032.1	Genbank	gene	21605	22405	.	-	.	ID=gene-HMPREF1039_0318;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0318
AFIJ01000032.1	Genbank	CDS	21605	22405	.	-	0	ID=cds-EGL39926.1;Parent=gene-HMPREF1039_0318;Dbxref=NCBI_GP:EGL39926.1;Name=EGL39926.1;Note=identified by match to protein family HMM PF01408%3B match to protein family HMM PF03446%3B match to protein family HMM PF03807%3B match to protein family HMM TIGR00112;gbkey=CDS;gene=proC;locus_tag=HMPREF1039_0318;product=pyrroline-5-carboxylate reductase;protein_id=EGL39926.1;transl_table=11
AFIJ01000032.1	Genbank	gene	22476	23732	.	-	.	ID=gene-HMPREF1039_0319;Name=HMPREF1039_0319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0319
AFIJ01000032.1	Genbank	CDS	22476	23732	.	-	0	ID=cds-EGL39949.1;Parent=gene-HMPREF1039_0319;Dbxref=NCBI_GP:EGL39949.1;Name=EGL39949.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF1039_0319;product=aminotransferase%2C class I/II;protein_id=EGL39949.1;transl_table=11
AFIJ01000032.1	Genbank	gene	24100	25059	.	+	.	ID=gene-HMPREF1039_0320;Name=HMPREF1039_0320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0320
AFIJ01000032.1	Genbank	CDS	24100	25059	.	+	0	ID=cds-EGL39843.1;Parent=gene-HMPREF1039_0320;Dbxref=NCBI_GP:EGL39843.1;Name=EGL39843.1;gbkey=CDS;locus_tag=HMPREF1039_0320;product=NLPA lipoprotein;protein_id=EGL39843.1;transl_table=11
AFIJ01000032.1	Genbank	gene	25037	25750	.	+	.	ID=gene-HMPREF1039_0321;Name=HMPREF1039_0321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0321
AFIJ01000032.1	Genbank	CDS	25037	25750	.	+	0	ID=cds-EGL39886.1;Parent=gene-HMPREF1039_0321;Dbxref=NCBI_GP:EGL39886.1;Name=EGL39886.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0321;product=ABC transporter%2C ATP-binding protein;protein_id=EGL39886.1;transl_table=11
AFIJ01000032.1	Genbank	gene	25865	26491	.	+	.	ID=gene-HMPREF1039_0322;Name=HMPREF1039_0322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0322
AFIJ01000032.1	Genbank	CDS	25865	26491	.	+	0	ID=cds-EGL39874.1;Parent=gene-HMPREF1039_0322;Dbxref=NCBI_GP:EGL39874.1;Name=EGL39874.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF1039_0322;product=ABC transporter%2C permease protein;protein_id=EGL39874.1;transl_table=11
AFIJ01000032.1	Genbank	gene	26647	26802	.	-	.	ID=gene-HMPREF1039_0323;Name=HMPREF1039_0323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0323
AFIJ01000032.1	Genbank	CDS	26647	26802	.	-	0	ID=cds-EGL39850.1;Parent=gene-HMPREF1039_0323;Dbxref=NCBI_GP:EGL39850.1;Name=EGL39850.1;gbkey=CDS;locus_tag=HMPREF1039_0323;product=hypothetical protein;protein_id=EGL39850.1;transl_table=11
AFIJ01000032.1	Genbank	gene	26956	28119	.	+	.	ID=gene-HMPREF1039_0324;Name=HMPREF1039_0324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0324
AFIJ01000032.1	Genbank	CDS	26956	28119	.	+	0	ID=cds-EGL39890.1;Parent=gene-HMPREF1039_0324;Dbxref=NCBI_GP:EGL39890.1;Name=EGL39890.1;Note=identified by match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF1039_0324;product=transporter%2C major facilitator family protein;protein_id=EGL39890.1;transl_table=11
AFIJ01000032.1	Genbank	gene	28305	29495	.	-	.	ID=gene-HMPREF1039_0325;Name=HMPREF1039_0325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0325
AFIJ01000032.1	Genbank	CDS	28305	29495	.	-	0	ID=cds-EGL39925.1;Parent=gene-HMPREF1039_0325;Dbxref=NCBI_GP:EGL39925.1;Name=EGL39925.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF1039_0325;product=aminotransferase%2C class I/II;protein_id=EGL39925.1;transl_table=11
AFIJ01000032.1	Genbank	gene	29552	29968	.	-	.	ID=gene-HMPREF1039_0326;Name=HMPREF1039_0326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0326
AFIJ01000032.1	Genbank	CDS	29552	29968	.	-	0	ID=cds-EGL39881.1;Parent=gene-HMPREF1039_0326;Dbxref=NCBI_GP:EGL39881.1;Name=EGL39881.1;Note=identified by match to protein family HMM PF04246;gbkey=CDS;locus_tag=HMPREF1039_0326;product=positive regulator of sigma(E)%2C RseC/MucC;protein_id=EGL39881.1;transl_table=11
AFIJ01000032.1	Genbank	gene	30184	32214	.	-	.	ID=gene-HMPREF1039_0327;Name=HMPREF1039_0327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0327
AFIJ01000032.1	Genbank	CDS	30184	32214	.	-	0	ID=cds-EGL39932.1;Parent=gene-HMPREF1039_0327;Dbxref=NCBI_GP:EGL39932.1;Name=EGL39932.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=HMPREF1039_0327;product=heavy metal translocating P-type ATPase;protein_id=EGL39932.1;transl_table=11
AFIJ01000032.1	Genbank	gene	32274	32927	.	-	.	ID=gene-HMPREF1039_0328;Name=HMPREF1039_0328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0328
AFIJ01000032.1	Genbank	CDS	32274	32927	.	-	0	ID=cds-EGL39938.1;Parent=gene-HMPREF1039_0328;Dbxref=NCBI_GP:EGL39938.1;Name=EGL39938.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0328;product=hypothetical protein;protein_id=EGL39938.1;transl_table=11
AFIJ01000032.1	Genbank	gene	32930	33232	.	-	.	ID=gene-HMPREF1039_0329;Name=HMPREF1039_0329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0329
AFIJ01000032.1	Genbank	CDS	32930	33232	.	-	0	ID=cds-EGL39907.1;Parent=gene-HMPREF1039_0329;Dbxref=NCBI_GP:EGL39907.1;Name=EGL39907.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0329;product=hypothetical protein;protein_id=EGL39907.1;transl_table=11
AFIJ01000032.1	Genbank	gene	33313	33531	.	-	.	ID=gene-HMPREF1039_0330;Name=HMPREF1039_0330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0330
AFIJ01000032.1	Genbank	CDS	33313	33531	.	-	0	ID=cds-EGL39946.1;Parent=gene-HMPREF1039_0330;Dbxref=NCBI_GP:EGL39946.1;Name=EGL39946.1;gbkey=CDS;locus_tag=HMPREF1039_0330;product=hypothetical protein;protein_id=EGL39946.1;transl_table=11
AFIJ01000032.1	Genbank	gene	33952	35643	.	-	.	ID=gene-HMPREF1039_0331;Name=HMPREF1039_0331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0331
AFIJ01000032.1	Genbank	CDS	33952	35643	.	-	0	ID=cds-EGL39851.1;Parent=gene-HMPREF1039_0331;Dbxref=NCBI_GP:EGL39851.1;Name=EGL39851.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0331;product=hypothetical protein;protein_id=EGL39851.1;transl_table=11
AFIJ01000032.1	Genbank	gene	35865	36890	.	-	.	ID=gene-HMPREF1039_0332;Name=HMPREF1039_0332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0332
AFIJ01000032.1	Genbank	CDS	35865	36890	.	-	0	ID=cds-EGL39897.1;Parent=gene-HMPREF1039_0332;Dbxref=NCBI_GP:EGL39897.1;Name=EGL39897.1;gbkey=CDS;locus_tag=HMPREF1039_0332;product=hypothetical protein;protein_id=EGL39897.1;transl_table=11
AFIJ01000032.1	Genbank	gene	36887	38038	.	-	.	ID=gene-HMPREF1039_0333;Name=HMPREF1039_0333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0333
AFIJ01000032.1	Genbank	CDS	36887	38038	.	-	0	ID=cds-EGL39882.1;Parent=gene-HMPREF1039_0333;Dbxref=NCBI_GP:EGL39882.1;Name=EGL39882.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF1039_0333;product=hypothetical protein;protein_id=EGL39882.1;transl_table=11
AFIJ01000032.1	Genbank	gene	38134	39117	.	-	.	ID=gene-HMPREF1039_0334;Name=HMPREF1039_0334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0334
AFIJ01000032.1	Genbank	CDS	38134	39117	.	-	0	ID=cds-EGL39845.1;Parent=gene-HMPREF1039_0334;Dbxref=NCBI_GP:EGL39845.1;Name=EGL39845.1;Note=identified by match to protein family HMM PF00710%3B match to protein family HMM TIGR00520;gbkey=CDS;locus_tag=HMPREF1039_0334;product=L-asparaginase%2C type II;protein_id=EGL39845.1;transl_table=11
AFIJ01000032.1	Genbank	gene	39301	40038	.	-	.	ID=gene-HMPREF1039_0335;Name=HMPREF1039_0335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0335
AFIJ01000032.1	Genbank	CDS	39301	40038	.	-	0	ID=cds-EGL39910.1;Parent=gene-HMPREF1039_0335;Dbxref=NCBI_GP:EGL39910.1;Name=EGL39910.1;gbkey=CDS;locus_tag=HMPREF1039_0335;product=hypothetical protein;protein_id=EGL39910.1;transl_table=11
AFIJ01000032.1	Genbank	gene	40065	40496	.	-	.	ID=gene-HMPREF1039_0336;Name=HMPREF1039_0336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0336
AFIJ01000032.1	Genbank	CDS	40065	40496	.	-	0	ID=cds-EGL39923.1;Parent=gene-HMPREF1039_0336;Dbxref=NCBI_GP:EGL39923.1;Name=EGL39923.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0336;product=hypothetical protein;protein_id=EGL39923.1;transl_table=11
AFIJ01000032.1	Genbank	gene	40505	41539	.	-	.	ID=gene-HMPREF1039_0337;Name=HMPREF1039_0337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0337
AFIJ01000032.1	Genbank	CDS	40505	41539	.	-	0	ID=cds-EGL39899.1;Parent=gene-HMPREF1039_0337;Dbxref=NCBI_GP:EGL39899.1;Name=EGL39899.1;gbkey=CDS;locus_tag=HMPREF1039_0337;product=hypothetical protein;protein_id=EGL39899.1;transl_table=11
AFIJ01000032.1	Genbank	gene	41559	42836	.	-	.	ID=gene-HMPREF1039_0338;Name=HMPREF1039_0338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0338
AFIJ01000032.1	Genbank	CDS	41559	42836	.	-	0	ID=cds-EGL39896.1;Parent=gene-HMPREF1039_0338;Dbxref=NCBI_GP:EGL39896.1;Name=EGL39896.1;Note=identified by match to protein family HMM PF01957;gbkey=CDS;locus_tag=HMPREF1039_0338;product=nodulation efficiency protein D;protein_id=EGL39896.1;transl_table=11
AFIJ01000032.1	Genbank	gene	42872	43285	.	-	.	ID=gene-HMPREF1039_0339;Name=HMPREF1039_0339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0339
AFIJ01000032.1	Genbank	CDS	42872	43285	.	-	0	ID=cds-EGL39872.1;Parent=gene-HMPREF1039_0339;Dbxref=NCBI_GP:EGL39872.1;Name=EGL39872.1;gbkey=CDS;locus_tag=HMPREF1039_0339;product=hypothetical protein;protein_id=EGL39872.1;transl_table=11
AFIJ01000032.1	Genbank	gene	43369	43959	.	-	.	ID=gene-HMPREF1039_0340;Name=HMPREF1039_0340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0340
AFIJ01000032.1	Genbank	CDS	43369	43959	.	-	0	ID=cds-EGL39873.1;Parent=gene-HMPREF1039_0340;Dbxref=NCBI_GP:EGL39873.1;Name=EGL39873.1;gbkey=CDS;locus_tag=HMPREF1039_0340;product=hypothetical protein;protein_id=EGL39873.1;transl_table=11
AFIJ01000032.1	Genbank	gene	43969	44958	.	-	.	ID=gene-HMPREF1039_0341;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0341
AFIJ01000032.1	Genbank	CDS	43969	44958	.	-	0	ID=cds-EGL39947.1;Parent=gene-HMPREF1039_0341;Dbxref=NCBI_GP:EGL39947.1;Name=EGL39947.1;Note=identified by match to protein family HMM PF00579%3B match to protein family HMM TIGR00233;gbkey=CDS;gene=trpS;locus_tag=HMPREF1039_0341;product=tryptophan--tRNA ligase;protein_id=EGL39947.1;transl_table=11
AFIJ01000032.1	Genbank	sequence_feature	45010	45233	.	-	.	ID=id-AFIJ01000032.1:45010..45233;Note=T-box leader;gbkey=misc_feature
AFIJ01000032.1	Genbank	gene	45420	46682	.	+	.	ID=gene-HMPREF1039_0343;Name=HMPREF1039_0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0343
AFIJ01000032.1	Genbank	CDS	45420	46682	.	+	0	ID=cds-EGL39848.1;Parent=gene-HMPREF1039_0343;Dbxref=NCBI_GP:EGL39848.1;Name=EGL39848.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF1039_0343;product=DEAD/DEAH box helicase;protein_id=EGL39848.1;transl_table=11
AFIJ01000032.1	Genbank	gene	46693	47379	.	+	.	ID=gene-HMPREF1039_0344;Name=HMPREF1039_0344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0344
AFIJ01000032.1	Genbank	CDS	46693	47379	.	+	0	ID=cds-EGL39842.1;Parent=gene-HMPREF1039_0344;Dbxref=NCBI_GP:EGL39842.1;Name=EGL39842.1;gbkey=CDS;locus_tag=HMPREF1039_0344;product=hypothetical protein;protein_id=EGL39842.1;transl_table=11
AFIJ01000032.1	Genbank	gene	47491	48078	.	+	.	ID=gene-HMPREF1039_0345;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0345
AFIJ01000032.1	Genbank	CDS	47491	48078	.	+	0	ID=cds-EGL39944.1;Parent=gene-HMPREF1039_0345;Dbxref=NCBI_GP:EGL39944.1;Name=EGL39944.1;Note=identified by match to protein family HMM PF00163%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR01017;gbkey=CDS;gene=rpsD;locus_tag=HMPREF1039_0345;product=ribosomal protein S4;protein_id=EGL39944.1;transl_table=11
AFIJ01000032.1	Genbank	gene	48145	48399	.	-	.	ID=gene-HMPREF1039_0346;Name=HMPREF1039_0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0346
AFIJ01000032.1	Genbank	CDS	48145	48399	.	-	0	ID=cds-EGL39868.1;Parent=gene-HMPREF1039_0346;Dbxref=NCBI_GP:EGL39868.1;Name=EGL39868.1;gbkey=CDS;locus_tag=HMPREF1039_0346;product=hypothetical protein;protein_id=EGL39868.1;transl_table=11
AFIJ01000032.1	Genbank	gene	48580	50184	.	-	.	ID=gene-HMPREF1039_0347;Name=HMPREF1039_0347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0347
AFIJ01000032.1	Genbank	CDS	48580	50184	.	-	0	ID=cds-EGL39865.1;Parent=gene-HMPREF1039_0347;Dbxref=NCBI_GP:EGL39865.1;Name=EGL39865.1;Note=identified by match to protein family HMM PF02652;gbkey=CDS;locus_tag=HMPREF1039_0347;product=transporter%2C lactate permease (LctP) family;protein_id=EGL39865.1;transl_table=11
AFIJ01000032.1	Genbank	gene	50602	50715	.	-	.	ID=gene-HMPREF1039_0348;Name=HMPREF1039_0348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0348
AFIJ01000032.1	Genbank	CDS	50602	50715	.	-	0	ID=cds-EGL39853.1;Parent=gene-HMPREF1039_0348;Dbxref=NCBI_GP:EGL39853.1;Name=EGL39853.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0348;product=hypothetical protein;protein_id=EGL39853.1;transl_table=11
AFIJ01000032.1	Genbank	gene	50905	51555	.	+	.	ID=gene-HMPREF1039_0349;Name=HMPREF1039_0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0349
AFIJ01000032.1	Genbank	CDS	50905	51555	.	+	0	ID=cds-EGL39901.1;Parent=gene-HMPREF1039_0349;Dbxref=NCBI_GP:EGL39901.1;Name=EGL39901.1;gbkey=CDS;locus_tag=HMPREF1039_0349;product=hypothetical protein;protein_id=EGL39901.1;transl_table=11
AFIJ01000032.1	Genbank	gene	51751	54549	.	-	.	ID=gene-HMPREF1039_0350;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0350
AFIJ01000032.1	Genbank	CDS	51751	54549	.	-	0	ID=cds-EGL39849.1;Parent=gene-HMPREF1039_0350;Dbxref=NCBI_GP:EGL39849.1;Name=EGL39849.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF06827%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00392;gbkey=CDS;gene=ileS;locus_tag=HMPREF1039_0350;product=isoleucine--tRNA ligase;protein_id=EGL39849.1;transl_table=11
AFIJ01000032.1	Genbank	sequence_feature	54584	54786	.	-	.	ID=id-AFIJ01000032.1:54584..54786;Note=T-box leader;gbkey=misc_feature
AFIJ01000032.1	Genbank	gene	54858	56261	.	-	.	ID=gene-HMPREF1039_0352;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0352
AFIJ01000032.1	Genbank	CDS	54858	56261	.	-	0	ID=cds-EGL39939.1;Parent=gene-HMPREF1039_0352;Dbxref=NCBI_GP:EGL39939.1;Name=EGL39939.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF1039_0352;product=amino acid carrier protein;protein_id=EGL39939.1;transl_table=11
AFIJ01000032.1	Genbank	gene	56258	56380	.	-	.	ID=gene-HMPREF1039_0353;Name=HMPREF1039_0353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0353
AFIJ01000032.1	Genbank	CDS	56258	56380	.	-	0	ID=cds-EGL39846.1;Parent=gene-HMPREF1039_0353;Dbxref=NCBI_GP:EGL39846.1;Name=EGL39846.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0353;product=hypothetical protein;protein_id=EGL39846.1;transl_table=11
AFIJ01000032.1	Genbank	gene	56696	57424	.	+	.	ID=gene-HMPREF1039_0354;Name=npdA;gbkey=Gene;gene=npdA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0354
AFIJ01000032.1	Genbank	CDS	56696	57424	.	+	0	ID=cds-EGL39934.1;Parent=gene-HMPREF1039_0354;Dbxref=NCBI_GP:EGL39934.1;Name=EGL39934.1;Note=identified by match to protein family HMM PF02146;gbkey=CDS;gene=npdA;locus_tag=HMPREF1039_0354;product=transcriptional regulator%2C Sir2 family;protein_id=EGL39934.1;transl_table=11
AFIJ01000032.1	Genbank	gene	57561	59933	.	-	.	ID=gene-HMPREF1039_0355;Name=HMPREF1039_0355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0355
AFIJ01000032.1	Genbank	CDS	57561	59933	.	-	0	ID=cds-EGL39941.1;Parent=gene-HMPREF1039_0355;Dbxref=NCBI_GP:EGL39941.1;Name=EGL39941.1;Note=identified by match to protein family HMM PF00488%3B match to protein family HMM PF01713%3B match to protein family HMM TIGR01069;gbkey=CDS;locus_tag=HMPREF1039_0355;product=recombination and DNA strand exchange inhibitor protein;protein_id=EGL39941.1;transl_table=11
AFIJ01000032.1	Genbank	gene	59946	62351	.	-	.	ID=gene-HMPREF1039_0356;Name=HMPREF1039_0356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0356
AFIJ01000032.1	Genbank	CDS	59946	62351	.	-	0	ID=cds-EGL39866.1;Parent=gene-HMPREF1039_0356;Dbxref=NCBI_GP:EGL39866.1;Name=EGL39866.1;Note=identified by match to protein family HMM PF01136;gbkey=CDS;locus_tag=HMPREF1039_0356;product=peptidase%2C U32 family;protein_id=EGL39866.1;transl_table=11
AFIJ01000032.1	Genbank	gene	62510	62977	.	-	.	ID=gene-HMPREF1039_0357;Name=HMPREF1039_0357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0357
AFIJ01000032.1	Genbank	CDS	62510	62977	.	-	0	ID=cds-EGL39862.1;Parent=gene-HMPREF1039_0357;Dbxref=NCBI_GP:EGL39862.1;Name=EGL39862.1;gbkey=CDS;locus_tag=HMPREF1039_0357;product=hypothetical protein;protein_id=EGL39862.1;transl_table=11
AFIJ01000032.1	Genbank	gene	63021	63479	.	-	.	ID=gene-HMPREF1039_0358;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0358
AFIJ01000032.1	Genbank	CDS	63021	63479	.	-	0	ID=cds-EGL39878.1;Parent=gene-HMPREF1039_0358;Dbxref=NCBI_GP:EGL39878.1;Name=EGL39878.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR01510;gbkey=CDS;gene=coaD;locus_tag=HMPREF1039_0358;product=pantetheine-phosphate adenylyltransferase;protein_id=EGL39878.1;transl_table=11
AFIJ01000032.1	Genbank	gene	63481	64068	.	-	.	ID=gene-HMPREF1039_0359;Name=HMPREF1039_0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0359
AFIJ01000032.1	Genbank	CDS	63481	64068	.	-	0	ID=cds-EGL39908.1;Parent=gene-HMPREF1039_0359;Dbxref=NCBI_GP:EGL39908.1;Name=EGL39908.1;Note=identified by match to protein family HMM PF03602;gbkey=CDS;locus_tag=HMPREF1039_0359;product=RNA methyltransferase%2C RsmD family;protein_id=EGL39908.1;transl_table=11
AFIJ01000032.1	Genbank	gene	64118	64735	.	-	.	ID=gene-HMPREF1039_0360;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=HMPREF1039_0360
AFIJ01000032.1	Genbank	CDS	64118	64735	.	-	0	ID=cds-EGL39929.1;Parent=gene-HMPREF1039_0360;Dbxref=NCBI_GP:EGL39929.1;Name=EGL39929.1;Note=identified by match to protein family HMM PF02660%3B match to protein family HMM TIGR00023;gbkey=CDS;gene=plsY;locus_tag=HMPREF1039_0360;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=EGL39929.1;transl_table=11
AFIJ01000032.1	Genbank	gene	64732	66063	.	-	.	ID=gene-HMPREF1039_0361;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=HMPREF1039_0361
AFIJ01000032.1	Genbank	CDS	64732	66063	.	-	0	ID=cds-EGL39943.1;Parent=gene-HMPREF1039_0361;Dbxref=NCBI_GP:EGL39943.1;Name=EGL39943.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03594;gbkey=CDS;gene=der;locus_tag=HMPREF1039_0361;product=ribosome biogenesis GTPase Der;protein_id=EGL39943.1;transl_table=11
AFIJ01000032.1	Genbank	gene	66184	68091	.	-	.	ID=gene-HMPREF1039_0362;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0362
AFIJ01000032.1	Genbank	CDS	66184	68091	.	-	0	ID=cds-EGL39864.1;Parent=gene-HMPREF1039_0362;Dbxref=NCBI_GP:EGL39864.1;Name=EGL39864.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF02401%3B match to protein family HMM TIGR00216;gbkey=CDS;gene=ispH;locus_tag=HMPREF1039_0362;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=EGL39864.1;transl_table=11
AFIJ01000032.1	Genbank	gene	68088	68702	.	-	.	ID=gene-HMPREF1039_0363;Name=HMPREF1039_0363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0363
AFIJ01000032.1	Genbank	CDS	68088	68702	.	-	0	ID=cds-EGL39912.1;Parent=gene-HMPREF1039_0363;Dbxref=NCBI_GP:EGL39912.1;Name=EGL39912.1;Note=identified by match to protein family HMM PF01553%3B match to protein family HMM TIGR00530;gbkey=CDS;locus_tag=HMPREF1039_0363;product=Acyltransferase;protein_id=EGL39912.1;transl_table=11
AFIJ01000032.1	Genbank	gene	68699	69370	.	-	.	ID=gene-HMPREF1039_0364;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=HMPREF1039_0364
AFIJ01000032.1	Genbank	CDS	68699	69370	.	-	0	ID=cds-EGL39916.1;Parent=gene-HMPREF1039_0364;Dbxref=NCBI_GP:EGL39916.1;Name=EGL39916.1;Note=identified by match to protein family HMM PF02224%3B match to protein family HMM TIGR00017;gbkey=CDS;gene=cmk;locus_tag=HMPREF1039_0364;product=cytidylate kinase;protein_id=EGL39916.1;transl_table=11
AFIJ01000032.1	Genbank	gene	69367	70608	.	-	.	ID=gene-HMPREF1039_0365;Name=HMPREF1039_0365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0365
AFIJ01000032.1	Genbank	CDS	69367	70608	.	-	0	ID=cds-EGL39891.1;Parent=gene-HMPREF1039_0365;Dbxref=NCBI_GP:EGL39891.1;Name=EGL39891.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01134%3B match to protein family HMM PF01266%3B match to protein family HMM PF03486%3B match to protein family HMM PF07992%3B match to protein family HMM TIGR00275;gbkey=CDS;locus_tag=HMPREF1039_0365;product=flavoprotein family protein;protein_id=EGL39891.1;transl_table=11
AFIJ01000032.1	Genbank	gene	70624	71340	.	-	.	ID=gene-HMPREF1039_0366;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0366
AFIJ01000032.1	Genbank	CDS	70624	71340	.	-	0	ID=cds-EGL39937.1;Parent=gene-HMPREF1039_0366;Dbxref=NCBI_GP:EGL39937.1;Name=EGL39937.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;gene=rluB;locus_tag=HMPREF1039_0366;product=pseudouridylate synthase;protein_id=EGL39937.1;transl_table=11
AFIJ01000032.1	Genbank	gene	71312	71938	.	-	.	ID=gene-HMPREF1039_0367;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0367
AFIJ01000032.1	Genbank	CDS	71312	71938	.	-	0	ID=cds-EGL39889.1;Parent=gene-HMPREF1039_0367;Dbxref=NCBI_GP:EGL39889.1;Name=EGL39889.1;Note=identified by match to protein family HMM PF04079%3B match to protein family HMM TIGR00281;gbkey=CDS;gene=scpB;locus_tag=HMPREF1039_0367;product=segregation and condensation protein B;protein_id=EGL39889.1;transl_table=11
AFIJ01000032.1	Genbank	gene	71901	72695	.	-	.	ID=gene-HMPREF1039_0368;Name=HMPREF1039_0368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0368
AFIJ01000032.1	Genbank	CDS	71901	72695	.	-	0	ID=cds-EGL39885.1;Parent=gene-HMPREF1039_0368;Dbxref=NCBI_GP:EGL39885.1;Name=EGL39885.1;Note=identified by match to protein family HMM PF02616;gbkey=CDS;locus_tag=HMPREF1039_0368;product=ScpA/B protein;protein_id=EGL39885.1;transl_table=11
AFIJ01000032.1	Genbank	gene	72759	72847	.	-	.	ID=gene-HMPREF1039_0369;Name=HMPREF1039_0369;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0369
AFIJ01000032.1	Genbank	tRNA	72759	72847	.	-	.	ID=rna-HMPREF1039_0369;Parent=gene-HMPREF1039_0369;gbkey=tRNA;locus_tag=HMPREF1039_0369;product=tRNA-Leu
AFIJ01000032.1	Genbank	exon	72759	72847	.	-	.	ID=exon-HMPREF1039_0369-1;Parent=rna-HMPREF1039_0369;gbkey=tRNA;locus_tag=HMPREF1039_0369;product=tRNA-Leu
AFIJ01000032.1	Genbank	gene	72864	72937	.	-	.	ID=gene-HMPREF1039_0370;Name=HMPREF1039_0370;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0370
AFIJ01000032.1	Genbank	tRNA	72864	72937	.	-	.	ID=rna-HMPREF1039_0370;Parent=gene-HMPREF1039_0370;gbkey=tRNA;locus_tag=HMPREF1039_0370;product=tRNA-Cys
AFIJ01000032.1	Genbank	exon	72864	72937	.	-	.	ID=exon-HMPREF1039_0370-1;Parent=rna-HMPREF1039_0370;gbkey=tRNA;locus_tag=HMPREF1039_0370;product=tRNA-Cys
AFIJ01000032.1	Genbank	gene	72941	73015	.	-	.	ID=gene-HMPREF1039_0371;Name=HMPREF1039_0371;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0371
AFIJ01000032.1	Genbank	tRNA	72941	73015	.	-	.	ID=rna-HMPREF1039_0371;Parent=gene-HMPREF1039_0371;gbkey=tRNA;locus_tag=HMPREF1039_0371;product=tRNA-Gly
AFIJ01000032.1	Genbank	exon	72941	73015	.	-	.	ID=exon-HMPREF1039_0371-1;Parent=rna-HMPREF1039_0371;gbkey=tRNA;locus_tag=HMPREF1039_0371;product=tRNA-Gly
AFIJ01000032.1	Genbank	gene	73024	73099	.	-	.	ID=gene-HMPREF1039_0372;Name=HMPREF1039_0372;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0372
AFIJ01000032.1	Genbank	tRNA	73024	73099	.	-	.	ID=rna-HMPREF1039_0372;Parent=gene-HMPREF1039_0372;gbkey=tRNA;locus_tag=HMPREF1039_0372;product=tRNA-Phe
AFIJ01000032.1	Genbank	exon	73024	73099	.	-	.	ID=exon-HMPREF1039_0372-1;Parent=rna-HMPREF1039_0372;gbkey=tRNA;locus_tag=HMPREF1039_0372;product=tRNA-Phe
AFIJ01000032.1	Genbank	gene	73105	73181	.	-	.	ID=gene-HMPREF1039_0373;Name=HMPREF1039_0373;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0373
AFIJ01000032.1	Genbank	tRNA	73105	73181	.	-	.	ID=rna-HMPREF1039_0373;Parent=gene-HMPREF1039_0373;gbkey=tRNA;locus_tag=HMPREF1039_0373;product=tRNA-Asp
AFIJ01000032.1	Genbank	exon	73105	73181	.	-	.	ID=exon-HMPREF1039_0373-1;Parent=rna-HMPREF1039_0373;gbkey=tRNA;locus_tag=HMPREF1039_0373;product=tRNA-Asp
AFIJ01000032.1	Genbank	gene	73378	74913	.	-	.	ID=gene-HMPREF1039_0374;Name=HMPREF1039_0374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0374
AFIJ01000032.1	Genbank	CDS	73378	74913	.	-	0	ID=cds-EGL39898.1;Parent=gene-HMPREF1039_0374;Dbxref=NCBI_GP:EGL39898.1;Name=EGL39898.1;Note=identified by match to protein family HMM PF00013%3B match to protein family HMM PF01966%3B match to protein family HMM TIGR00277%3B match to protein family HMM TIGR03319;gbkey=CDS;locus_tag=HMPREF1039_0374;product=YmdA/YtgF family protein;protein_id=EGL39898.1;transl_table=11
AFIJ01000032.1	Genbank	gene	75135	75554	.	-	.	ID=gene-HMPREF1039_0375;Name=HMPREF1039_0375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0375
AFIJ01000032.1	Genbank	CDS	75135	75554	.	-	0	ID=cds-EGL39895.1;Parent=gene-HMPREF1039_0375;Dbxref=NCBI_GP:EGL39895.1;Name=EGL39895.1;gbkey=CDS;locus_tag=HMPREF1039_0375;product=hypothetical protein;protein_id=EGL39895.1;transl_table=11
AFIJ01000032.1	Genbank	gene	75551	76597	.	-	.	ID=gene-HMPREF1039_0376;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0376
AFIJ01000032.1	Genbank	CDS	75551	76597	.	-	0	ID=cds-EGL39927.1;Parent=gene-HMPREF1039_0376;Dbxref=NCBI_GP:EGL39927.1;Name=EGL39927.1;Note=identified by match to protein family HMM PF00154%3B match to protein family HMM TIGR02012;gbkey=CDS;gene=recA;locus_tag=HMPREF1039_0376;product=RecA protein;protein_id=EGL39927.1;transl_table=11
AFIJ01000032.1	Genbank	gene	76610	77863	.	-	.	ID=gene-HMPREF1039_0377;Name=HMPREF1039_0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0377
AFIJ01000032.1	Genbank	CDS	76610	77863	.	-	0	ID=cds-EGL39854.1;Parent=gene-HMPREF1039_0377;Dbxref=NCBI_GP:EGL39854.1;Name=EGL39854.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM PF02464%3B match to protein family HMM TIGR00199%3B match to protein family HMM TIGR00200;gbkey=CDS;locus_tag=HMPREF1039_0377;product=competence/damage-inducible domain protein CinA;protein_id=EGL39854.1;transl_table=11
AFIJ01000032.1	Genbank	gene	77880	79211	.	-	.	ID=gene-HMPREF1039_0378;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=HMPREF1039_0378
AFIJ01000032.1	Genbank	CDS	77880	79211	.	-	0	ID=cds-EGL39903.1;Parent=gene-HMPREF1039_0378;Dbxref=NCBI_GP:EGL39903.1;Name=EGL39903.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01125;gbkey=CDS;gene=rimO;locus_tag=HMPREF1039_0378;product=ribosomal protein S12 methylthiotransferase RimO;protein_id=EGL39903.1;transl_table=11
AFIJ01000032.1	Genbank	gene	79212	80258	.	-	.	ID=gene-HMPREF1039_0379;Name=HMPREF1039_0379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0379
AFIJ01000032.1	Genbank	CDS	79212	80258	.	-	0	ID=cds-EGL39948.1;Parent=gene-HMPREF1039_0379;Dbxref=NCBI_GP:EGL39948.1;Name=EGL39948.1;gbkey=CDS;locus_tag=HMPREF1039_0379;product=hypothetical protein;protein_id=EGL39948.1;transl_table=11
AFIJ01000032.1	Genbank	gene	80315	80692	.	-	.	ID=gene-HMPREF1039_0380;Name=HMPREF1039_0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0380
AFIJ01000032.1	Genbank	CDS	80315	80692	.	-	0	ID=cds-EGL39857.1;Parent=gene-HMPREF1039_0380;Dbxref=NCBI_GP:EGL39857.1;Name=EGL39857.1;gbkey=CDS;locus_tag=HMPREF1039_0380;product=hypothetical protein;protein_id=EGL39857.1;transl_table=11
AFIJ01000032.1	Genbank	gene	80771	83233	.	-	.	ID=gene-HMPREF1039_0381;Name=spoIIIE;gbkey=Gene;gene=spoIIIE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0381
AFIJ01000032.1	Genbank	CDS	80771	83233	.	-	0	ID=cds-EGL39847.1;Parent=gene-HMPREF1039_0381;Dbxref=NCBI_GP:EGL39847.1;Name=EGL39847.1;Note=identified by match to protein family HMM PF01580%3B match to protein family HMM PF09397;gbkey=CDS;gene=spoIIIE;locus_tag=HMPREF1039_0381;product=FtsK/SpoIIIE family protein;protein_id=EGL39847.1;transl_table=11
AFIJ01000032.1	Genbank	gene	83251	84570	.	-	.	ID=gene-HMPREF1039_0382;Name=HMPREF1039_0382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0382
AFIJ01000032.1	Genbank	CDS	83251	84570	.	-	0	ID=cds-EGL39921.1;Parent=gene-HMPREF1039_0382;Dbxref=NCBI_GP:EGL39921.1;Name=EGL39921.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF1039_0382;product=recombination factor protein RarA;protein_id=EGL39921.1;transl_table=11
AFIJ01000032.1	Genbank	gene	84666	84844	.	-	.	ID=gene-HMPREF1039_0383;Name=HMPREF1039_0383;gbkey=Gene;gene_biotype=ncRNA;locus_tag=HMPREF1039_0383
AFIJ01000032.1	Genbank	ncRNA	84666	84844	.	-	.	ID=rna-HMPREF1039_0383;Parent=gene-HMPREF1039_0383;Note=6S / SsrS RNA%3B Rfam score 87.37;gbkey=ncRNA;inference=nucleotide motif:RFAM:RF00013;locus_tag=HMPREF1039_0383;product=6S / SsrS RNA
AFIJ01000032.1	Genbank	exon	84666	84844	.	-	.	ID=exon-HMPREF1039_0383-1;Parent=rna-HMPREF1039_0383;Note=6S / SsrS RNA%3B Rfam score 87.37;gbkey=ncRNA;inference=nucleotide motif:RFAM:RF00013;locus_tag=HMPREF1039_0383;product=6S / SsrS RNA
AFIJ01000032.1	Genbank	gene	84975	86975	.	-	.	ID=gene-HMPREF1039_0384;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=HMPREF1039_0384
AFIJ01000032.1	Genbank	CDS	84975	86975	.	-	0	ID=cds-EGL39871.1;Parent=gene-HMPREF1039_0384;Dbxref=NCBI_GP:EGL39871.1;Name=EGL39871.1;Note=identified by match to protein family HMM PF00456%3B match to protein family HMM PF02779%3B match to protein family HMM PF02780%3B match to protein family HMM TIGR00232;gbkey=CDS;gene=tkt;locus_tag=HMPREF1039_0384;product=transketolase;protein_id=EGL39871.1;transl_table=11
AFIJ01000032.1	Genbank	gene	87094	87984	.	-	.	ID=gene-HMPREF1039_0385;Name=HMPREF1039_0385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0385
AFIJ01000032.1	Genbank	CDS	87094	87984	.	-	0	ID=cds-EGL39930.1;Parent=gene-HMPREF1039_0385;Dbxref=NCBI_GP:EGL39930.1;Name=EGL39930.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;locus_tag=HMPREF1039_0385;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=EGL39930.1;transl_table=11
AFIJ01000032.1	Genbank	gene	88008	89027	.	-	.	ID=gene-HMPREF1039_0386;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0386
AFIJ01000032.1	Genbank	CDS	88008	89027	.	-	0	ID=cds-EGL39951.1;Parent=gene-HMPREF1039_0386;Dbxref=NCBI_GP:EGL39951.1;Name=EGL39951.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM PF04613%3B match to protein family HMM TIGR01853;gbkey=CDS;gene=lpxD;locus_tag=HMPREF1039_0386;product=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=EGL39951.1;transl_table=11
AFIJ01000032.1	Genbank	gene	89040	89459	.	-	.	ID=gene-HMPREF1039_0387;Name=HMPREF1039_0387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0387
AFIJ01000032.1	Genbank	CDS	89040	89459	.	-	0	ID=cds-EGL39856.1;Parent=gene-HMPREF1039_0387;Dbxref=NCBI_GP:EGL39856.1;Name=EGL39856.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF1039_0387;product=outer membrane protein;protein_id=EGL39856.1;transl_table=11
AFIJ01000032.1	Genbank	gene	89475	90368	.	-	.	ID=gene-HMPREF1039_0388;Name=HMPREF1039_0388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0388
AFIJ01000032.1	Genbank	CDS	89475	90368	.	-	0	ID=cds-EGL39945.1;Parent=gene-HMPREF1039_0388;Dbxref=NCBI_GP:EGL39945.1;Name=EGL39945.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0388;product=hypothetical protein;protein_id=EGL39945.1;transl_table=11
AFIJ01000032.1	Genbank	gene	90405	90890	.	-	.	ID=gene-HMPREF1039_0389;Name=HMPREF1039_0389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0389
AFIJ01000032.1	Genbank	CDS	90405	90890	.	-	0	ID=cds-EGL39936.1;Parent=gene-HMPREF1039_0389;Dbxref=NCBI_GP:EGL39936.1;Name=EGL39936.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF1039_0389;product=outer membrane protein;protein_id=EGL39936.1;transl_table=11
AFIJ01000032.1	Genbank	gene	90906	92180	.	-	.	ID=gene-HMPREF1039_0390;Name=HMPREF1039_0390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0390
AFIJ01000032.1	Genbank	CDS	90906	92180	.	-	0	ID=cds-EGL39869.1;Parent=gene-HMPREF1039_0390;Dbxref=NCBI_GP:EGL39869.1;Name=EGL39869.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0390;product=hypothetical protein;protein_id=EGL39869.1;transl_table=11
AFIJ01000032.1	Genbank	gene	92187	94244	.	-	.	ID=gene-HMPREF1039_0391;Name=HMPREF1039_0391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0391
AFIJ01000032.1	Genbank	CDS	92187	94244	.	-	0	ID=cds-EGL39933.1;Parent=gene-HMPREF1039_0391;Dbxref=NCBI_GP:EGL39933.1;Name=EGL39933.1;Note=identified by match to protein family HMM PF01103%3B match to protein family HMM PF07244;gbkey=CDS;locus_tag=HMPREF1039_0391;product=outer membrane protein%2C OMP85 family;protein_id=EGL39933.1;transl_table=11
AFIJ01000032.1	Genbank	gene	94257	94739	.	-	.	ID=gene-HMPREF1039_0392;Name=HMPREF1039_0392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0392
AFIJ01000032.1	Genbank	CDS	94257	94739	.	-	0	ID=cds-EGL39952.1;Parent=gene-HMPREF1039_0392;Dbxref=NCBI_GP:EGL39952.1;Name=EGL39952.1;gbkey=CDS;locus_tag=HMPREF1039_0392;product=hypothetical protein;protein_id=EGL39952.1;transl_table=11
AFIJ01000032.1	Genbank	gene	94936	95583	.	-	.	ID=gene-HMPREF1039_0393;Name=HMPREF1039_0393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0393
AFIJ01000032.1	Genbank	CDS	94936	95583	.	-	0	ID=cds-EGL39942.1;Parent=gene-HMPREF1039_0393;Dbxref=NCBI_GP:EGL39942.1;Name=EGL39942.1;Note=identified by match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281%3B match to protein family HMM TIGR02937;gbkey=CDS;locus_tag=HMPREF1039_0393;product=Sigma-70 region 2;protein_id=EGL39942.1;transl_table=11
AFIJ01000032.1	Genbank	gene	95599	99894	.	-	.	ID=gene-HMPREF1039_0394;Name=HMPREF1039_0394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0394
AFIJ01000032.1	Genbank	CDS	95599	99894	.	-	0	ID=cds-EGL39940.1;Parent=gene-HMPREF1039_0394;Dbxref=NCBI_GP:EGL39940.1;Name=EGL39940.1;Note=identified by match to protein family HMM PF04357;gbkey=CDS;locus_tag=HMPREF1039_0394;product=hypothetical protein;protein_id=EGL39940.1;transl_table=11
AFIJ01000032.1	Genbank	gene	100023	101468	.	-	.	ID=gene-HMPREF1039_0395;Name=HMPREF1039_0395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0395
AFIJ01000032.1	Genbank	CDS	100023	101468	.	-	0	ID=cds-EGL39919.1;Parent=gene-HMPREF1039_0395;Dbxref=NCBI_GP:EGL39919.1;Name=EGL39919.1;Note=identified by match to protein family HMM PF02321;gbkey=CDS;locus_tag=HMPREF1039_0395;product=outer membrane efflux protein;protein_id=EGL39919.1;transl_table=11
AFIJ01000032.1	Genbank	gene	101531	102766	.	-	.	ID=gene-HMPREF1039_0396;Name=HMPREF1039_0396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0396
AFIJ01000032.1	Genbank	CDS	101531	102766	.	-	0	ID=cds-EGL39920.1;Parent=gene-HMPREF1039_0396;Dbxref=NCBI_GP:EGL39920.1;Name=EGL39920.1;Note=identified by match to protein family HMM PF02470;gbkey=CDS;locus_tag=HMPREF1039_0396;product=putative virulence factor Mce family protein;protein_id=EGL39920.1;transl_table=11
AFIJ01000032.1	Genbank	gene	102750	103514	.	-	.	ID=gene-HMPREF1039_0397;Name=HMPREF1039_0397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0397
AFIJ01000032.1	Genbank	CDS	102750	103514	.	-	0	ID=cds-EGL39950.1;Parent=gene-HMPREF1039_0397;Dbxref=NCBI_GP:EGL39950.1;Name=EGL39950.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0397;product=ABC transporter%2C ATP-binding protein;protein_id=EGL39950.1;transl_table=11
AFIJ01000032.1	Genbank	gene	103523	104284	.	-	.	ID=gene-HMPREF1039_0398;Name=HMPREF1039_0398;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0398
AFIJ01000032.1	Genbank	CDS	103523	104284	.	-	0	ID=cds-EGL39892.1;Parent=gene-HMPREF1039_0398;Dbxref=NCBI_GP:EGL39892.1;Name=EGL39892.1;Note=identified by match to protein family HMM PF02405%3B match to protein family HMM TIGR00056;gbkey=CDS;locus_tag=HMPREF1039_0398;product=hypothetical protein;protein_id=EGL39892.1;transl_table=11
AFIJ01000032.1	Genbank	gene	104449	106404	.	-	.	ID=gene-HMPREF1039_0399;Name=HMPREF1039_0399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0399
AFIJ01000032.1	Genbank	CDS	104449	106404	.	-	0	ID=cds-EGL39918.1;Parent=gene-HMPREF1039_0399;Dbxref=NCBI_GP:EGL39918.1;Name=EGL39918.1;gbkey=CDS;locus_tag=HMPREF1039_0399;product=hypothetical protein;protein_id=EGL39918.1;transl_table=11
AFIJ01000032.1	Genbank	gene	106417	106710	.	-	.	ID=gene-HMPREF1039_0400;Name=HMPREF1039_0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0400
AFIJ01000032.1	Genbank	CDS	106417	106710	.	-	0	ID=cds-EGL39860.1;Parent=gene-HMPREF1039_0400;Dbxref=NCBI_GP:EGL39860.1;Name=EGL39860.1;gbkey=CDS;locus_tag=HMPREF1039_0400;product=hypothetical protein;protein_id=EGL39860.1;transl_table=11
AFIJ01000032.1	Genbank	gene	106722	107699	.	-	.	ID=gene-HMPREF1039_0401;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0401
AFIJ01000032.1	Genbank	CDS	106722	107699	.	-	0	ID=cds-EGL39913.1;Parent=gene-HMPREF1039_0401;Dbxref=NCBI_GP:EGL39913.1;Name=EGL39913.1;Note=identified by match to protein family HMM PF06723%3B match to protein family HMM TIGR00904;gbkey=CDS;gene=mreB;locus_tag=HMPREF1039_0401;product=cell shape determining protein%2C MreB/Mrl family;protein_id=EGL39913.1;transl_table=11
AFIJ01000032.1	Genbank	gene	107776	109047	.	-	.	ID=gene-HMPREF1039_0402;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0402
AFIJ01000032.1	Genbank	CDS	107776	109047	.	-	0	ID=cds-EGL39876.1;Parent=gene-HMPREF1039_0402;Dbxref=NCBI_GP:EGL39876.1;Name=EGL39876.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01072;gbkey=CDS;gene=murA;locus_tag=HMPREF1039_0402;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=EGL39876.1;transl_table=11
AFIJ01000032.1	Genbank	gene	109138	109296	.	-	.	ID=gene-HMPREF1039_0403;Name=HMPREF1039_0403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0403
AFIJ01000032.1	Genbank	CDS	109138	109296	.	-	0	ID=cds-EGL39861.1;Parent=gene-HMPREF1039_0403;Dbxref=NCBI_GP:EGL39861.1;Name=EGL39861.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0403;product=hypothetical protein;protein_id=EGL39861.1;transl_table=11
AFIJ01000032.1	Genbank	gene	109293	109874	.	-	.	ID=gene-HMPREF1039_0404;Name=HMPREF1039_0404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0404
AFIJ01000032.1	Genbank	CDS	109293	109874	.	-	0	ID=cds-EGL39844.1;Parent=gene-HMPREF1039_0404;Dbxref=NCBI_GP:EGL39844.1;Name=EGL39844.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF1039_0404;product=phosphoglycerate mutase family protein;protein_id=EGL39844.1;transl_table=11
AFIJ01000032.1	Genbank	gene	109947	113480	.	-	.	ID=gene-HMPREF1039_0405;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0405
AFIJ01000032.1	Genbank	CDS	109947	113480	.	-	0	ID=cds-EGL39924.1;Parent=gene-HMPREF1039_0405;Dbxref=NCBI_GP:EGL39924.1;Name=EGL39924.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;locus_tag=HMPREF1039_0405;product=pyruvate synthase;protein_id=EGL39924.1;transl_table=11
AFIJ01000032.1	Genbank	gene	113692	114858	.	-	.	ID=gene-HMPREF1039_0406;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=HMPREF1039_0406
AFIJ01000032.1	Genbank	CDS	113692	114858	.	-	0	ID=cds-EGL39911.1;Parent=gene-HMPREF1039_0406;Dbxref=NCBI_GP:EGL39911.1;Name=EGL39911.1;Note=identified by match to protein family HMM PF02353%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242;gbkey=CDS;gene=cfa;locus_tag=HMPREF1039_0406;product=Cyclopropane-fatty-acyl-phospholipid synthase;protein_id=EGL39911.1;transl_table=11
AFIJ01000032.1	Genbank	gene	114885	115712	.	-	.	ID=gene-HMPREF1039_0407;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0407
AFIJ01000032.1	Genbank	CDS	114885	115712	.	-	0	ID=cds-EGL39894.1;Parent=gene-HMPREF1039_0407;Dbxref=NCBI_GP:EGL39894.1;Name=EGL39894.1;Note=identified by match to protein family HMM PF00763%3B match to protein family HMM PF02882;gbkey=CDS;gene=folD;locus_tag=HMPREF1039_0407;product=tetrahydrofolate dehydrogenase/cyclohydrolase%2C NAD(P)-binding domain protein;protein_id=EGL39894.1;transl_table=11
AFIJ01000032.1	Genbank	gene	115725	117728	.	-	.	ID=gene-HMPREF1039_0408;Name=HMPREF1039_0408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0408
AFIJ01000032.1	Genbank	CDS	115725	117728	.	-	0	ID=cds-EGL39900.1;Parent=gene-HMPREF1039_0408;Dbxref=NCBI_GP:EGL39900.1;Name=EGL39900.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM PF03793;gbkey=CDS;locus_tag=HMPREF1039_0408;product=penicillin-binding protein%2C transpeptidase domain protein;protein_id=EGL39900.1;transl_table=11
AFIJ01000032.1	Genbank	gene	117739	119079	.	-	.	ID=gene-HMPREF1039_0409;Name=HMPREF1039_0409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0409
AFIJ01000032.1	Genbank	CDS	117739	119079	.	-	0	ID=cds-EGL39905.1;Parent=gene-HMPREF1039_0409;Dbxref=NCBI_GP:EGL39905.1;Name=EGL39905.1;Note=identified by match to protein family HMM PF01743;gbkey=CDS;locus_tag=HMPREF1039_0409;product=tRNA nucleotidyltransferase/poly(A) polymerase family protein;protein_id=EGL39905.1;transl_table=11
AFIJ01000032.1	Genbank	gene	119272	119799	.	+	.	ID=gene-HMPREF1039_0410;Name=HMPREF1039_0410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0410
AFIJ01000032.1	Genbank	CDS	119272	119799	.	+	0	ID=cds-EGL39909.1;Parent=gene-HMPREF1039_0410;Dbxref=NCBI_GP:EGL39909.1;Name=EGL39909.1;Note=identified by match to protein family HMM PF02572;gbkey=CDS;locus_tag=HMPREF1039_0410;product=putative cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=EGL39909.1;transl_table=11
AFIJ01000032.1	Genbank	gene	119810	121021	.	+	.	ID=gene-HMPREF1039_0411;Name=HMPREF1039_0411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0411
AFIJ01000032.1	Genbank	CDS	119810	121021	.	+	0	ID=cds-EGL39877.1;Parent=gene-HMPREF1039_0411;Dbxref=NCBI_GP:EGL39877.1;Name=EGL39877.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=HMPREF1039_0411;product=cation diffusion facilitator family transporter;protein_id=EGL39877.1;transl_table=11
AFIJ01000032.1	Genbank	gene	121106	121182	.	-	.	ID=gene-HMPREF1039_0412;Name=HMPREF1039_0412;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0412
AFIJ01000032.1	Genbank	tRNA	121106	121182	.	-	.	ID=rna-HMPREF1039_0412;Parent=gene-HMPREF1039_0412;gbkey=tRNA;locus_tag=HMPREF1039_0412;product=tRNA-Ile
AFIJ01000032.1	Genbank	exon	121106	121182	.	-	.	ID=exon-HMPREF1039_0412-1;Parent=rna-HMPREF1039_0412;gbkey=tRNA;locus_tag=HMPREF1039_0412;product=tRNA-Ile
AFIJ01000032.1	Genbank	gene	121788	121922	.	-	.	ID=gene-HMPREF1039_0413;Name=HMPREF1039_0413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0413
AFIJ01000032.1	Genbank	CDS	121788	121922	.	-	0	ID=cds-EGL39888.1;Parent=gene-HMPREF1039_0413;Dbxref=NCBI_GP:EGL39888.1;Name=EGL39888.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0413;product=hypothetical protein;protein_id=EGL39888.1;transl_table=11
AFIJ01000032.1	Genbank	gene	121919	122308	.	-	.	ID=gene-HMPREF1039_0414;Name=HMPREF1039_0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0414
AFIJ01000032.1	Genbank	CDS	121919	122308	.	-	0	ID=cds-EGL39902.1;Parent=gene-HMPREF1039_0414;Dbxref=NCBI_GP:EGL39902.1;Name=EGL39902.1;gbkey=CDS;locus_tag=HMPREF1039_0414;product=hypothetical protein;protein_id=EGL39902.1;transl_table=11
AFIJ01000032.1	Genbank	gene	122435	123004	.	-	.	ID=gene-HMPREF1039_0415;Name=HMPREF1039_0415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0415
AFIJ01000032.1	Genbank	CDS	122435	123004	.	-	0	ID=cds-EGL39867.1;Parent=gene-HMPREF1039_0415;Dbxref=NCBI_GP:EGL39867.1;Name=EGL39867.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_0415;product=hypothetical protein;protein_id=EGL39867.1;transl_table=11
##sequence-region AFIJ01000031.1 1 1521
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000031.1	Genbank	region	1	1521	.	+	.	ID=AFIJ01000031.1:1..1521;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000031.1	Genbank	gene	1	891	.	+	.	ID=gene-HMPREF1039_1626;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1626;partial=true;start_range=.,1
AFIJ01000031.1	Genbank	CDS	1	891	.	+	0	ID=cds-EGL40150.1;Parent=gene-HMPREF1039_1626;Dbxref=NCBI_GP:EGL40150.1;Name=EGL40150.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00925%3B match to protein family HMM TIGR00505;gbkey=CDS;gene=ribA;locus_tag=HMPREF1039_1626;partial=true;product=GTP cyclohydrolase II;protein_id=EGL40150.1;start_range=.,1;transl_table=11
AFIJ01000031.1	Genbank	binding_site	1120	1236	.	+	.	ID=id-AFIJ01000031.1:1120..1236;Note=FMN riboswitch (RFN element)%3B Rfam score 103.25;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00050
AFIJ01000031.1	Genbank	gene	1357	1521	.	+	.	ID=gene-HMPREF1039_1628;Name=HMPREF1039_1628;end_range=1521,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1628;partial=true
AFIJ01000031.1	Genbank	CDS	1357	1521	.	+	0	ID=cds-EGL40149.1;Parent=gene-HMPREF1039_1628;Dbxref=NCBI_GP:EGL40149.1;Name=EGL40149.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;end_range=1521,.;gbkey=CDS;locus_tag=HMPREF1039_1628;partial=true;product=putative 3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=EGL40149.1;transl_table=11
##sequence-region AFIJ01000030.1 1 1067
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000030.1	Genbank	region	1	1067	.	+	.	ID=AFIJ01000030.1:1..1067;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000030.1	Genbank	gene	1	1067	.	-	.	ID=gene-HMPREF1039_1631;Name=HMPREF1039_1631;end_range=1067,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1631;partial=true;start_range=.,1
AFIJ01000030.1	Genbank	CDS	1	1067	.	-	2	ID=cds-EGL40164.1;Parent=gene-HMPREF1039_1631;Dbxref=NCBI_GP:EGL40164.1;Name=EGL40164.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=1067,.;gbkey=CDS;locus_tag=HMPREF1039_1631;partial=true;product=hypothetical protein;protein_id=EGL40164.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000029.1 1 104968
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000029.1	Genbank	region	1	104968	.	+	.	ID=AFIJ01000029.1:1..104968;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000029.1	Genbank	gene	1	633	.	+	.	ID=gene-HMPREF1039_0661;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0661;partial=true;start_range=.,1
AFIJ01000029.1	Genbank	CDS	1	633	.	+	0	ID=cds-EGL40248.1;Parent=gene-HMPREF1039_0661;Dbxref=NCBI_GP:EGL40248.1;Name=EGL40248.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00925%3B match to protein family HMM TIGR00505;gbkey=CDS;gene=ribA;locus_tag=HMPREF1039_0661;partial=true;product=GTP cyclohydrolase II;protein_id=EGL40248.1;start_range=.,1;transl_table=11
AFIJ01000029.1	Genbank	gene	719	994	.	-	.	ID=gene-HMPREF1039_0662;Name=HMPREF1039_0662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0662
AFIJ01000029.1	Genbank	CDS	719	994	.	-	0	ID=cds-EGL40299.1;Parent=gene-HMPREF1039_0662;Dbxref=NCBI_GP:EGL40299.1;Name=EGL40299.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0662;product=hypothetical protein;protein_id=EGL40299.1;transl_table=11
AFIJ01000029.1	Genbank	gene	1176	1481	.	-	.	ID=gene-HMPREF1039_0663;Name=HMPREF1039_0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0663
AFIJ01000029.1	Genbank	CDS	1176	1481	.	-	0	ID=cds-EGL40324.1;Parent=gene-HMPREF1039_0663;Dbxref=NCBI_GP:EGL40324.1;Name=EGL40324.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0663;product=hypothetical protein;protein_id=EGL40324.1;transl_table=11
AFIJ01000029.1	Genbank	gene	1605	2027	.	-	.	ID=gene-HMPREF1039_0664;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0664
AFIJ01000029.1	Genbank	CDS	1605	2027	.	-	0	ID=cds-EGL40321.1;Parent=gene-HMPREF1039_0664;Dbxref=NCBI_GP:EGL40321.1;Name=EGL40321.1;Note=identified by match to protein family HMM PF00401%3B match to protein family HMM PF02823%3B match to protein family HMM TIGR01216;gbkey=CDS;gene=atpC;locus_tag=HMPREF1039_0664;product=ATP synthase F1%2C epsilon subunit;protein_id=EGL40321.1;transl_table=11
AFIJ01000029.1	Genbank	gene	2031	3449	.	-	.	ID=gene-HMPREF1039_0665;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0665
AFIJ01000029.1	Genbank	CDS	2031	3449	.	-	0	ID=cds-EGL40275.1;Parent=gene-HMPREF1039_0665;Dbxref=NCBI_GP:EGL40275.1;Name=EGL40275.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM TIGR01039;gbkey=CDS;gene=atpD;locus_tag=HMPREF1039_0665;product=ATP synthase F1%2C beta subunit;protein_id=EGL40275.1;transl_table=11
AFIJ01000029.1	Genbank	gene	3489	4349	.	-	.	ID=gene-HMPREF1039_0666;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0666
AFIJ01000029.1	Genbank	CDS	3489	4349	.	-	0	ID=cds-EGL40283.1;Parent=gene-HMPREF1039_0666;Dbxref=NCBI_GP:EGL40283.1;Name=EGL40283.1;Note=identified by match to protein family HMM PF00231%3B match to protein family HMM TIGR01146;gbkey=CDS;gene=atpG;locus_tag=HMPREF1039_0666;product=ATP synthase F1%2C gamma subunit;protein_id=EGL40283.1;transl_table=11
AFIJ01000029.1	Genbank	gene	4353	5888	.	-	.	ID=gene-HMPREF1039_0667;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0667
AFIJ01000029.1	Genbank	CDS	4353	5888	.	-	0	ID=cds-EGL40270.1;Parent=gene-HMPREF1039_0667;Dbxref=NCBI_GP:EGL40270.1;Name=EGL40270.1;Note=identified by match to protein family HMM PF00006%3B match to protein family HMM PF00306%3B match to protein family HMM PF02874%3B match to protein family HMM PF09378%3B match to protein family HMM TIGR00962;gbkey=CDS;gene=atpA;locus_tag=HMPREF1039_0667;product=ATP synthase F1%2C alpha subunit;protein_id=EGL40270.1;transl_table=11
AFIJ01000029.1	Genbank	gene	5888	6454	.	-	.	ID=gene-HMPREF1039_0668;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0668
AFIJ01000029.1	Genbank	CDS	5888	6454	.	-	0	ID=cds-EGL40290.1;Parent=gene-HMPREF1039_0668;Dbxref=NCBI_GP:EGL40290.1;Name=EGL40290.1;Note=identified by match to protein family HMM PF00213%3B match to protein family HMM TIGR01145;gbkey=CDS;gene=atpH;locus_tag=HMPREF1039_0668;product=ATP synthase F1%2C delta subunit;protein_id=EGL40290.1;transl_table=11
AFIJ01000029.1	Genbank	gene	6457	6951	.	-	.	ID=gene-HMPREF1039_0669;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0669
AFIJ01000029.1	Genbank	CDS	6457	6951	.	-	0	ID=cds-EGL40313.1;Parent=gene-HMPREF1039_0669;Dbxref=NCBI_GP:EGL40313.1;Name=EGL40313.1;Note=identified by match to protein family HMM PF00430%3B match to protein family HMM TIGR01144;gbkey=CDS;gene=atpF;locus_tag=HMPREF1039_0669;product=ATP synthase F0%2C B subunit;protein_id=EGL40313.1;transl_table=11
AFIJ01000029.1	Genbank	gene	7000	7257	.	-	.	ID=gene-HMPREF1039_0670;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0670
AFIJ01000029.1	Genbank	CDS	7000	7257	.	-	0	ID=cds-EGL40318.1;Parent=gene-HMPREF1039_0670;Dbxref=NCBI_GP:EGL40318.1;Name=EGL40318.1;Note=identified by match to protein family HMM PF00137%3B match to protein family HMM TIGR01260;gbkey=CDS;gene=atpE;locus_tag=HMPREF1039_0670;product=ATP synthase F0%2C C subunit;protein_id=EGL40318.1;transl_table=11
AFIJ01000029.1	Genbank	gene	7308	7979	.	-	.	ID=gene-HMPREF1039_0671;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0671
AFIJ01000029.1	Genbank	CDS	7308	7979	.	-	0	ID=cds-EGL40280.1;Parent=gene-HMPREF1039_0671;Dbxref=NCBI_GP:EGL40280.1;Name=EGL40280.1;Note=identified by match to protein family HMM PF00119%3B match to protein family HMM TIGR01131;gbkey=CDS;gene=atpB;locus_tag=HMPREF1039_0671;product=ATP synthase F0%2C A subunit;protein_id=EGL40280.1;transl_table=11
AFIJ01000029.1	Genbank	gene	7983	8369	.	-	.	ID=gene-HMPREF1039_0672;Name=HMPREF1039_0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0672
AFIJ01000029.1	Genbank	CDS	7983	8369	.	-	0	ID=cds-EGL40260.1;Parent=gene-HMPREF1039_0672;Dbxref=NCBI_GP:EGL40260.1;Name=EGL40260.1;gbkey=CDS;locus_tag=HMPREF1039_0672;product=hypothetical protein;protein_id=EGL40260.1;transl_table=11
AFIJ01000029.1	Genbank	gene	8379	8591	.	-	.	ID=gene-HMPREF1039_0673;Name=HMPREF1039_0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0673
AFIJ01000029.1	Genbank	CDS	8379	8591	.	-	0	ID=cds-EGL40287.1;Parent=gene-HMPREF1039_0673;Dbxref=NCBI_GP:EGL40287.1;Name=EGL40287.1;gbkey=CDS;locus_tag=HMPREF1039_0673;product=hypothetical protein;protein_id=EGL40287.1;transl_table=11
AFIJ01000029.1	Genbank	gene	9063	10217	.	-	.	ID=gene-HMPREF1039_0674;Name=HMPREF1039_0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0674
AFIJ01000029.1	Genbank	CDS	9063	10217	.	-	0	ID=cds-EGL40334.1;Parent=gene-HMPREF1039_0674;Dbxref=NCBI_GP:EGL40334.1;Name=EGL40334.1;Note=identified by match to protein family HMM PF02350%3B match to protein family HMM TIGR00236;gbkey=CDS;locus_tag=HMPREF1039_0674;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=EGL40334.1;transl_table=11
AFIJ01000029.1	Genbank	gene	10255	11298	.	-	.	ID=gene-HMPREF1039_0675;Name=HMPREF1039_0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0675
AFIJ01000029.1	Genbank	CDS	10255	11298	.	-	0	ID=cds-EGL40346.1;Parent=gene-HMPREF1039_0675;Dbxref=NCBI_GP:EGL40346.1;Name=EGL40346.1;Note=identified by match to protein family HMM PF00953;gbkey=CDS;locus_tag=HMPREF1039_0675;product=glycosyltransferase%2C group 4 family;protein_id=EGL40346.1;transl_table=11
AFIJ01000029.1	Genbank	gene	11335	12693	.	-	.	ID=gene-HMPREF1039_0676;Name=HMPREF1039_0676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0676
AFIJ01000029.1	Genbank	CDS	11335	12693	.	-	0	ID=cds-EGL40301.1;Parent=gene-HMPREF1039_0676;Dbxref=NCBI_GP:EGL40301.1;Name=EGL40301.1;Note=identified by match to protein family HMM PF05167;gbkey=CDS;locus_tag=HMPREF1039_0676;product=hypothetical protein;protein_id=EGL40301.1;transl_table=11
AFIJ01000029.1	Genbank	gene	12706	12978	.	-	.	ID=gene-HMPREF1039_0677;Name=HMPREF1039_0677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0677
AFIJ01000029.1	Genbank	CDS	12706	12978	.	-	0	ID=cds-EGL40296.1;Parent=gene-HMPREF1039_0677;Dbxref=NCBI_GP:EGL40296.1;Name=EGL40296.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;locus_tag=HMPREF1039_0677;product=ACT domain protein;protein_id=EGL40296.1;transl_table=11
AFIJ01000029.1	Genbank	gene	13190	13624	.	+	.	ID=gene-HMPREF1039_0678;Name=HMPREF1039_0678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0678
AFIJ01000029.1	Genbank	CDS	13190	13624	.	+	0	ID=cds-EGL40345.1;Parent=gene-HMPREF1039_0678;Dbxref=NCBI_GP:EGL40345.1;Name=EGL40345.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0678;product=putative exodeoxyribonuclease III;protein_id=EGL40345.1;transl_table=11
AFIJ01000029.1	Genbank	gene	13627	13956	.	+	.	ID=gene-HMPREF1039_0679;Name=HMPREF1039_0679;Note=exoA;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0679
AFIJ01000029.1	Genbank	CDS	13627	13956	.	+	0	ID=cds-EGL40259.1;Parent=gene-HMPREF1039_0679;Dbxref=NCBI_GP:EGL40259.1;Name=EGL40259.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0679;product=hypothetical protein;protein_id=EGL40259.1;transl_table=11
AFIJ01000029.1	Genbank	gene	14040	15002	.	-	.	ID=gene-HMPREF1039_0680;Name=HMPREF1039_0680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0680
AFIJ01000029.1	Genbank	CDS	14040	15002	.	-	0	ID=cds-EGL40289.1;Parent=gene-HMPREF1039_0680;Dbxref=NCBI_GP:EGL40289.1;Name=EGL40289.1;Note=identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866;gbkey=CDS;locus_tag=HMPREF1039_0680;product=lactate/malate dehydrogenase%2C NAD binding domain protein;protein_id=EGL40289.1;transl_table=11
AFIJ01000029.1	Genbank	gene	15202	16635	.	-	.	ID=gene-HMPREF1039_0681;Name=HMPREF1039_0681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0681
AFIJ01000029.1	Genbank	CDS	15202	16635	.	-	0	ID=cds-EGL40291.1;Parent=gene-HMPREF1039_0681;Dbxref=NCBI_GP:EGL40291.1;Name=EGL40291.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM TIGR00757;gbkey=CDS;locus_tag=HMPREF1039_0681;product=S1 RNA binding domain protein;protein_id=EGL40291.1;transl_table=11
AFIJ01000029.1	Genbank	gene	16688	17788	.	-	.	ID=gene-HMPREF1039_0682;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0682
AFIJ01000029.1	Genbank	CDS	16688	17788	.	-	0	ID=cds-EGL40295.1;Parent=gene-HMPREF1039_0682;Dbxref=NCBI_GP:EGL40295.1;Name=EGL40295.1;Note=identified by match to protein family HMM PF01098%3B match to protein family HMM TIGR02210;gbkey=CDS;gene=mrdB;locus_tag=HMPREF1039_0682;product=rod shape-determining protein RodA;protein_id=EGL40295.1;transl_table=11
AFIJ01000029.1	Genbank	gene	17799	18797	.	-	.	ID=gene-HMPREF1039_0683;Name=HMPREF1039_0683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0683
AFIJ01000029.1	Genbank	CDS	17799	18797	.	-	0	ID=cds-EGL40343.1;Parent=gene-HMPREF1039_0683;Dbxref=NCBI_GP:EGL40343.1;Name=EGL40343.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;locus_tag=HMPREF1039_0683;product=CobQ/CobB/MinD/ParA nucleotide binding domain protein;protein_id=EGL40343.1;transl_table=11
AFIJ01000029.1	Genbank	gene	18812	20644	.	-	.	ID=gene-HMPREF1039_0684;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0684
AFIJ01000029.1	Genbank	CDS	18812	20644	.	-	0	ID=cds-EGL40316.1;Parent=gene-HMPREF1039_0684;Dbxref=NCBI_GP:EGL40316.1;Name=EGL40316.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF03717%3B match to protein family HMM TIGR03423;gbkey=CDS;gene=mrdA;locus_tag=HMPREF1039_0684;product=penicillin-binding protein 2;protein_id=EGL40316.1;transl_table=11
AFIJ01000029.1	Genbank	gene	20662	21174	.	-	.	ID=gene-HMPREF1039_0685;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0685
AFIJ01000029.1	Genbank	CDS	20662	21174	.	-	0	ID=cds-EGL40264.1;Parent=gene-HMPREF1039_0685;Dbxref=NCBI_GP:EGL40264.1;Name=EGL40264.1;Note=identified by match to protein family HMM TIGR03426;gbkey=CDS;gene=mreD;locus_tag=HMPREF1039_0685;product=rod shape-determining protein MreD;protein_id=EGL40264.1;transl_table=11
AFIJ01000029.1	Genbank	gene	21171	22091	.	-	.	ID=gene-HMPREF1039_0686;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0686
AFIJ01000029.1	Genbank	CDS	21171	22091	.	-	0	ID=cds-EGL40249.1;Parent=gene-HMPREF1039_0686;Dbxref=NCBI_GP:EGL40249.1;Name=EGL40249.1;Note=identified by match to protein family HMM PF04085%3B match to protein family HMM TIGR00219;gbkey=CDS;gene=mreC;locus_tag=HMPREF1039_0686;product=rod shape-determining protein MreC;protein_id=EGL40249.1;transl_table=11
AFIJ01000029.1	Genbank	gene	22094	23134	.	-	.	ID=gene-HMPREF1039_0687;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0687
AFIJ01000029.1	Genbank	CDS	22094	23134	.	-	0	ID=cds-EGL40307.1;Parent=gene-HMPREF1039_0687;Dbxref=NCBI_GP:EGL40307.1;Name=EGL40307.1;Note=identified by match to protein family HMM PF06723;gbkey=CDS;gene=mreB;locus_tag=HMPREF1039_0687;product=cell shape determining protein%2C MreB/Mrl family;protein_id=EGL40307.1;transl_table=11
AFIJ01000029.1	Genbank	gene	23357	24685	.	-	.	ID=gene-HMPREF1039_0688;Name=HMPREF1039_0688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0688
AFIJ01000029.1	Genbank	CDS	23357	24685	.	-	0	ID=cds-EGL40268.1;Parent=gene-HMPREF1039_0688;Dbxref=NCBI_GP:EGL40268.1;Name=EGL40268.1;Note=identified by match to protein family HMM PF03051;gbkey=CDS;locus_tag=HMPREF1039_0688;product=peptidase C1-like family;protein_id=EGL40268.1;transl_table=11
AFIJ01000029.1	Genbank	gene	24868	25794	.	-	.	ID=gene-HMPREF1039_0689;Name=HMPREF1039_0689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0689
AFIJ01000029.1	Genbank	CDS	24868	25794	.	-	0	ID=cds-EGL40326.1;Parent=gene-HMPREF1039_0689;Dbxref=NCBI_GP:EGL40326.1;Name=EGL40326.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR02494;gbkey=CDS;locus_tag=HMPREF1039_0689;product=glycyl-radical enzyme activating protein family protein;protein_id=EGL40326.1;transl_table=11
AFIJ01000029.1	Genbank	gene	25820	28225	.	-	.	ID=gene-HMPREF1039_0690;Name=HMPREF1039_0690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0690
AFIJ01000029.1	Genbank	CDS	25820	28225	.	-	0	ID=cds-EGL40330.1;Parent=gene-HMPREF1039_0690;Dbxref=NCBI_GP:EGL40330.1;Name=EGL40330.1;Note=identified by match to protein family HMM PF01228%3B match to protein family HMM PF02901%3B match to protein family HMM TIGR01774;gbkey=CDS;locus_tag=HMPREF1039_0690;product=formate C-acetyltransferase;protein_id=EGL40330.1;transl_table=11
AFIJ01000029.1	Genbank	gene	28370	28516	.	-	.	ID=gene-HMPREF1039_0691;Name=HMPREF1039_0691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0691
AFIJ01000029.1	Genbank	CDS	28370	28516	.	-	0	ID=cds-EGL40314.1;Parent=gene-HMPREF1039_0691;Dbxref=NCBI_GP:EGL40314.1;Name=EGL40314.1;gbkey=CDS;locus_tag=HMPREF1039_0691;product=hypothetical protein;protein_id=EGL40314.1;transl_table=11
AFIJ01000029.1	Genbank	gene	28702	29322	.	-	.	ID=gene-HMPREF1039_0692;Name=ysxC;gbkey=Gene;gene=ysxC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0692
AFIJ01000029.1	Genbank	CDS	28702	29322	.	-	0	ID=cds-EGL40336.1;Parent=gene-HMPREF1039_0692;Dbxref=NCBI_GP:EGL40336.1;Name=EGL40336.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR03598;gbkey=CDS;gene=ysxC;locus_tag=HMPREF1039_0692;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=EGL40336.1;transl_table=11
AFIJ01000029.1	Genbank	gene	29324	31639	.	-	.	ID=gene-HMPREF1039_0693;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=HMPREF1039_0693
AFIJ01000029.1	Genbank	CDS	29324	31639	.	-	0	ID=cds-EGL40271.1;Parent=gene-HMPREF1039_0693;Dbxref=NCBI_GP:EGL40271.1;Name=EGL40271.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF02190%3B match to protein family HMM PF05362%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00763;gbkey=CDS;gene=lon;locus_tag=HMPREF1039_0693;product=endopeptidase La;protein_id=EGL40271.1;transl_table=11
AFIJ01000029.1	Genbank	gene	31713	32945	.	-	.	ID=gene-HMPREF1039_0694;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF1039_0694
AFIJ01000029.1	Genbank	CDS	31713	32945	.	-	0	ID=cds-EGL40269.1;Parent=gene-HMPREF1039_0694;Dbxref=NCBI_GP:EGL40269.1;Name=EGL40269.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF06689%3B match to protein family HMM PF07724%3B match to protein family HMM TIGR00382;gbkey=CDS;gene=clpX;locus_tag=HMPREF1039_0694;product=ATP-dependent Clp protease%2C ATP-binding subunit ClpX;protein_id=EGL40269.1;transl_table=11
AFIJ01000029.1	Genbank	gene	32957	33559	.	-	.	ID=gene-HMPREF1039_0695;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=HMPREF1039_0695
AFIJ01000029.1	Genbank	CDS	32957	33559	.	-	0	ID=cds-EGL40247.1;Parent=gene-HMPREF1039_0695;Dbxref=NCBI_GP:EGL40247.1;Name=EGL40247.1;Note=identified by match to protein family HMM PF00574%3B match to protein family HMM TIGR00493;gbkey=CDS;gene=clpP;locus_tag=HMPREF1039_0695;product=ATP-dependent Clp endopeptidase%2C proteolytic subunit ClpP;protein_id=EGL40247.1;transl_table=11
AFIJ01000029.1	Genbank	gene	33578	34903	.	-	.	ID=gene-HMPREF1039_0696;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=HMPREF1039_0696
AFIJ01000029.1	Genbank	CDS	33578	34903	.	-	0	ID=cds-EGL40254.1;Parent=gene-HMPREF1039_0696;Dbxref=NCBI_GP:EGL40254.1;Name=EGL40254.1;Note=identified by match to protein family HMM PF00254%3B match to protein family HMM PF05697%3B match to protein family HMM PF05698%3B match to protein family HMM TIGR00115;gbkey=CDS;gene=tig;locus_tag=HMPREF1039_0696;product=trigger factor;protein_id=EGL40254.1;transl_table=11
AFIJ01000029.1	Genbank	gene	35035	35202	.	+	.	ID=gene-HMPREF1039_0697;Name=HMPREF1039_0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0697
AFIJ01000029.1	Genbank	CDS	35035	35202	.	+	0	ID=cds-EGL40266.1;Parent=gene-HMPREF1039_0697;Dbxref=NCBI_GP:EGL40266.1;Name=EGL40266.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0697;product=hypothetical protein;protein_id=EGL40266.1;transl_table=11
AFIJ01000029.1	Genbank	gene	35184	37616	.	-	.	ID=gene-HMPREF1039_0698;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=HMPREF1039_0698
AFIJ01000029.1	Genbank	CDS	35184	37616	.	-	0	ID=cds-EGL40277.1;Parent=gene-HMPREF1039_0698;Dbxref=NCBI_GP:EGL40277.1;Name=EGL40277.1;Note=identified by match to protein family HMM PF01588%3B match to protein family HMM PF03147%3B match to protein family HMM PF03483%3B match to protein family HMM PF03484%3B match to protein family HMM TIGR00472;gbkey=CDS;gene=pheT;locus_tag=HMPREF1039_0698;product=phenylalanine--tRNA ligase%2C beta subunit;protein_id=EGL40277.1;transl_table=11
AFIJ01000029.1	Genbank	gene	37632	38657	.	-	.	ID=gene-HMPREF1039_0699;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0699
AFIJ01000029.1	Genbank	CDS	37632	38657	.	-	0	ID=cds-EGL40337.1;Parent=gene-HMPREF1039_0699;Dbxref=NCBI_GP:EGL40337.1;Name=EGL40337.1;Note=identified by match to protein family HMM PF01409%3B match to protein family HMM PF02912%3B match to protein family HMM TIGR00468;gbkey=CDS;gene=pheS;locus_tag=HMPREF1039_0699;product=phenylalanine--tRNA ligase%2C alpha subunit;protein_id=EGL40337.1;transl_table=11
AFIJ01000029.1	Genbank	sequence_feature	38704	38903	.	-	.	ID=id-AFIJ01000029.1:38704..38903;Note=T-box leader;gbkey=misc_feature
AFIJ01000029.1	Genbank	gene	38923	40065	.	-	.	ID=gene-HMPREF1039_0701;Name=acdA;gbkey=Gene;gene=acdA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0701
AFIJ01000029.1	Genbank	CDS	38923	40065	.	-	0	ID=cds-EGL40320.1;Parent=gene-HMPREF1039_0701;Dbxref=NCBI_GP:EGL40320.1;Name=EGL40320.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;gene=acdA;locus_tag=HMPREF1039_0701;product=acyl-CoA dehydrogenase%2C C-terminal domain protein;protein_id=EGL40320.1;transl_table=11
AFIJ01000029.1	Genbank	gene	40098	40523	.	-	.	ID=gene-HMPREF1039_0702;Name=HMPREF1039_0702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0702
AFIJ01000029.1	Genbank	CDS	40098	40523	.	-	0	ID=cds-EGL40329.1;Parent=gene-HMPREF1039_0702;Dbxref=NCBI_GP:EGL40329.1;Name=EGL40329.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;locus_tag=HMPREF1039_0702;product=hypothetical protein;protein_id=EGL40329.1;transl_table=11
AFIJ01000029.1	Genbank	gene	40537	40845	.	-	.	ID=gene-HMPREF1039_0703;Name=HMPREF1039_0703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0703
AFIJ01000029.1	Genbank	CDS	40537	40845	.	-	0	ID=cds-EGL40306.1;Parent=gene-HMPREF1039_0703;Dbxref=NCBI_GP:EGL40306.1;Name=EGL40306.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00369;gbkey=CDS;locus_tag=HMPREF1039_0703;product=hypothetical protein;protein_id=EGL40306.1;transl_table=11
AFIJ01000029.1	Genbank	gene	41326	42444	.	-	.	ID=gene-HMPREF1039_0704;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=HMPREF1039_0704
AFIJ01000029.1	Genbank	CDS	41326	42444	.	-	0	ID=cds-EGL40322.1;Parent=gene-HMPREF1039_0704;Dbxref=NCBI_GP:EGL40322.1;Name=EGL40322.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM PF06969%3B match to protein family HMM TIGR00539;gbkey=CDS;gene=hemN;locus_tag=HMPREF1039_0704;product=putative oxygen-independent coproporphyrinogen III oxidase;protein_id=EGL40322.1;transl_table=11
AFIJ01000029.1	Genbank	gene	42441	44243	.	-	.	ID=gene-HMPREF1039_0705;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0705
AFIJ01000029.1	Genbank	CDS	42441	44243	.	-	0	ID=cds-EGL40344.1;Parent=gene-HMPREF1039_0705;Dbxref=NCBI_GP:EGL40344.1;Name=EGL40344.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF03144%3B match to protein family HMM PF06421%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01393;gbkey=CDS;gene=lepA;locus_tag=HMPREF1039_0705;product=GTP-binding protein LepA;protein_id=EGL40344.1;transl_table=11
AFIJ01000029.1	Genbank	gene	44260	45348	.	-	.	ID=gene-HMPREF1039_0706;Name=trmU;gbkey=Gene;gene=trmU;gene_biotype=protein_coding;locus_tag=HMPREF1039_0706
AFIJ01000029.1	Genbank	CDS	44260	45348	.	-	0	ID=cds-EGL40339.1;Parent=gene-HMPREF1039_0706;Dbxref=NCBI_GP:EGL40339.1;Name=EGL40339.1;Note=identified by match to protein family HMM PF03054%3B match to protein family HMM TIGR00420;gbkey=CDS;gene=trmU;locus_tag=HMPREF1039_0706;product=tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;protein_id=EGL40339.1;transl_table=11
AFIJ01000029.1	Genbank	gene	45345	46502	.	-	.	ID=gene-HMPREF1039_0707;Name=HMPREF1039_0707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0707
AFIJ01000029.1	Genbank	CDS	45345	46502	.	-	0	ID=cds-EGL40338.1;Parent=gene-HMPREF1039_0707;Dbxref=NCBI_GP:EGL40338.1;Name=EGL40338.1;Note=identified by match to protein family HMM PF00266;gbkey=CDS;locus_tag=HMPREF1039_0707;product=aminotransferase%2C class V;protein_id=EGL40338.1;transl_table=11
AFIJ01000029.1	Genbank	gene	46647	47231	.	-	.	ID=gene-HMPREF1039_0708;Name=HMPREF1039_0708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0708
AFIJ01000029.1	Genbank	CDS	46647	47231	.	-	0	ID=cds-EGL40284.1;Parent=gene-HMPREF1039_0708;Dbxref=NCBI_GP:EGL40284.1;Name=EGL40284.1;gbkey=CDS;locus_tag=HMPREF1039_0708;product=outer membrane insertion signal domain protein;protein_id=EGL40284.1;transl_table=11
AFIJ01000029.1	Genbank	gene	47317	48348	.	-	.	ID=gene-HMPREF1039_0709;Name=HMPREF1039_0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0709
AFIJ01000029.1	Genbank	CDS	47317	48348	.	-	0	ID=cds-EGL40281.1;Parent=gene-HMPREF1039_0709;Dbxref=NCBI_GP:EGL40281.1;Name=EGL40281.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;locus_tag=HMPREF1039_0709;product=putative lipopolysaccharide heptosyltransferase I;protein_id=EGL40281.1;transl_table=11
AFIJ01000029.1	Genbank	gene	48335	48865	.	-	.	ID=gene-HMPREF1039_0710;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0710
AFIJ01000029.1	Genbank	CDS	48335	48865	.	-	0	ID=cds-EGL40311.1;Parent=gene-HMPREF1039_0710;Dbxref=NCBI_GP:EGL40311.1;Name=EGL40311.1;Note=identified by match to protein family HMM PF08645%3B match to protein family HMM TIGR01656%3B match to protein family HMM TIGR01662;gbkey=CDS;gene=gmhB;locus_tag=HMPREF1039_0710;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=EGL40311.1;transl_table=11
AFIJ01000029.1	Genbank	gene	48938	50422	.	-	.	ID=gene-HMPREF1039_0711;Name=rfaE;gbkey=Gene;gene=rfaE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0711
AFIJ01000029.1	Genbank	CDS	48938	50422	.	-	0	ID=cds-EGL40315.1;Parent=gene-HMPREF1039_0711;Dbxref=NCBI_GP:EGL40315.1;Name=EGL40315.1;Note=identified by match to protein family HMM PF00294%3B match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR02199;gbkey=CDS;gene=rfaE;locus_tag=HMPREF1039_0711;product=bifunctional protein RfaE%2C domain II;protein_id=EGL40315.1;transl_table=11
AFIJ01000029.1	Genbank	gene	50440	50913	.	-	.	ID=gene-HMPREF1039_0712;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=HMPREF1039_0712
AFIJ01000029.1	Genbank	CDS	50440	50913	.	-	0	ID=cds-EGL40255.1;Parent=gene-HMPREF1039_0712;Dbxref=NCBI_GP:EGL40255.1;Name=EGL40255.1;Note=identified by match to protein family HMM PF03477%3B match to protein family HMM TIGR00244;gbkey=CDS;gene=nrdR;locus_tag=HMPREF1039_0712;product=transcriptional regulator NrdR;protein_id=EGL40255.1;transl_table=11
AFIJ01000029.1	Genbank	gene	50982	52007	.	-	.	ID=gene-HMPREF1039_0713;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0713
AFIJ01000029.1	Genbank	CDS	50982	52007	.	-	0	ID=cds-EGL40246.1;Parent=gene-HMPREF1039_0713;Dbxref=NCBI_GP:EGL40246.1;Name=EGL40246.1;Note=identified by match to protein family HMM PF00091%3B match to protein family HMM PF03953%3B match to protein family HMM TIGR00065;gbkey=CDS;gene=ftsZ;locus_tag=HMPREF1039_0713;product=cell division protein FtsZ;protein_id=EGL40246.1;transl_table=11
AFIJ01000029.1	Genbank	gene	52131	53018	.	-	.	ID=gene-HMPREF1039_0714;Name=HMPREF1039_0714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0714
AFIJ01000029.1	Genbank	CDS	52131	53018	.	-	0	ID=cds-EGL40297.1;Parent=gene-HMPREF1039_0714;Dbxref=NCBI_GP:EGL40297.1;Name=EGL40297.1;Note=identified by match to protein family HMM PF08478;gbkey=CDS;locus_tag=HMPREF1039_0714;product=POTRA domain protein%2C FtsQ-type;protein_id=EGL40297.1;transl_table=11
AFIJ01000029.1	Genbank	gene	53046	53987	.	-	.	ID=gene-HMPREF1039_0715;Name=HMPREF1039_0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0715
AFIJ01000029.1	Genbank	CDS	53046	53987	.	-	0	ID=cds-EGL40340.1;Parent=gene-HMPREF1039_0715;Dbxref=NCBI_GP:EGL40340.1;Name=EGL40340.1;Note=identified by match to protein family HMM PF01071%3B match to protein family HMM PF01820%3B match to protein family HMM PF07478%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01205;gbkey=CDS;locus_tag=HMPREF1039_0715;product=D-ala D-ala ligase N-terminal domain protein;protein_id=EGL40340.1;transl_table=11
AFIJ01000029.1	Genbank	gene	53987	55381	.	-	.	ID=gene-HMPREF1039_0716;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0716
AFIJ01000029.1	Genbank	CDS	53987	55381	.	-	0	ID=cds-EGL40294.1;Parent=gene-HMPREF1039_0716;Dbxref=NCBI_GP:EGL40294.1;Name=EGL40294.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01082;gbkey=CDS;gene=murC;locus_tag=HMPREF1039_0716;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=EGL40294.1;transl_table=11
AFIJ01000029.1	Genbank	gene	55378	56514	.	-	.	ID=gene-HMPREF1039_0717;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0717
AFIJ01000029.1	Genbank	CDS	55378	56514	.	-	0	ID=cds-EGL40250.1;Parent=gene-HMPREF1039_0717;Dbxref=NCBI_GP:EGL40250.1;Name=EGL40250.1;Note=identified by match to protein family HMM PF03033%3B match to protein family HMM PF04101%3B match to protein family HMM TIGR01133;gbkey=CDS;gene=murG;locus_tag=HMPREF1039_0717;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=EGL40250.1;transl_table=11
AFIJ01000029.1	Genbank	gene	56546	57901	.	-	.	ID=gene-HMPREF1039_0718;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0718
AFIJ01000029.1	Genbank	CDS	56546	57901	.	-	0	ID=cds-EGL40308.1;Parent=gene-HMPREF1039_0718;Dbxref=NCBI_GP:EGL40308.1;Name=EGL40308.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01087;gbkey=CDS;gene=murD;locus_tag=HMPREF1039_0718;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=EGL40308.1;transl_table=11
AFIJ01000029.1	Genbank	gene	57939	58916	.	-	.	ID=gene-HMPREF1039_0719;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=HMPREF1039_0719
AFIJ01000029.1	Genbank	CDS	57939	58916	.	-	0	ID=cds-EGL40274.1;Parent=gene-HMPREF1039_0719;Dbxref=NCBI_GP:EGL40274.1;Name=EGL40274.1;Note=identified by match to protein family HMM PF00953%3B match to protein family HMM TIGR00445;gbkey=CDS;gene=mraY;locus_tag=HMPREF1039_0719;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=EGL40274.1;transl_table=11
AFIJ01000029.1	Genbank	gene	58922	60298	.	-	.	ID=gene-HMPREF1039_0720;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0720
AFIJ01000029.1	Genbank	CDS	58922	60298	.	-	0	ID=cds-EGL40302.1;Parent=gene-HMPREF1039_0720;Dbxref=NCBI_GP:EGL40302.1;Name=EGL40302.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01143;gbkey=CDS;gene=murF;locus_tag=HMPREF1039_0720;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=EGL40302.1;transl_table=11
AFIJ01000029.1	Genbank	gene	60301	61800	.	-	.	ID=gene-HMPREF1039_0721;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0721
AFIJ01000029.1	Genbank	CDS	60301	61800	.	-	0	ID=cds-EGL40245.1;Parent=gene-HMPREF1039_0721;Dbxref=NCBI_GP:EGL40245.1;Name=EGL40245.1;Note=identified by match to protein family HMM PF01225%3B match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01085;gbkey=CDS;gene=murE;locus_tag=HMPREF1039_0721;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=EGL40245.1;transl_table=11
AFIJ01000029.1	Genbank	gene	61899	62282	.	-	.	ID=gene-HMPREF1039_0722;Name=HMPREF1039_0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0722
AFIJ01000029.1	Genbank	CDS	61899	62282	.	-	0	ID=cds-EGL40303.1;Parent=gene-HMPREF1039_0722;Dbxref=NCBI_GP:EGL40303.1;Name=EGL40303.1;Note=identified by match to protein family HMM PF04977;gbkey=CDS;locus_tag=HMPREF1039_0722;product=putative cell division protein FtsL;protein_id=EGL40303.1;transl_table=11
AFIJ01000029.1	Genbank	gene	62322	63254	.	-	.	ID=gene-HMPREF1039_0723;Name=mraW;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=HMPREF1039_0723
AFIJ01000029.1	Genbank	CDS	62322	63254	.	-	0	ID=cds-EGL40304.1;Parent=gene-HMPREF1039_0723;Dbxref=NCBI_GP:EGL40304.1;Name=EGL40304.1;Note=identified by match to protein family HMM PF01795%3B match to protein family HMM TIGR00006;gbkey=CDS;gene=mraW;locus_tag=HMPREF1039_0723;product=S-adenosyl-methyltransferase MraW;protein_id=EGL40304.1;transl_table=11
AFIJ01000029.1	Genbank	gene	63263	63703	.	-	.	ID=gene-HMPREF1039_0724;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0724
AFIJ01000029.1	Genbank	CDS	63263	63703	.	-	0	ID=cds-EGL40325.1;Parent=gene-HMPREF1039_0724;Dbxref=NCBI_GP:EGL40325.1;Name=EGL40325.1;Note=identified by match to protein family HMM PF02381%3B match to protein family HMM TIGR00242;gbkey=CDS;gene=mraZ;locus_tag=HMPREF1039_0724;product=protein MraZ;protein_id=EGL40325.1;transl_table=11
AFIJ01000029.1	Genbank	gene	63864	64814	.	-	.	ID=gene-HMPREF1039_0725;Name=HMPREF1039_0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0725
AFIJ01000029.1	Genbank	CDS	63864	64814	.	-	0	ID=cds-EGL40305.1;Parent=gene-HMPREF1039_0725;Dbxref=NCBI_GP:EGL40305.1;Name=EGL40305.1;Note=identified by match to protein family HMM PF00749;gbkey=CDS;locus_tag=HMPREF1039_0725;product=tRNA ligase class I (E and Q)%2C catalytic domain protein;protein_id=EGL40305.1;transl_table=11
AFIJ01000029.1	Genbank	gene	64828	67749	.	-	.	ID=gene-HMPREF1039_0726;Name=HMPREF1039_0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0726
AFIJ01000029.1	Genbank	CDS	64828	67749	.	-	0	ID=cds-EGL40342.1;Parent=gene-HMPREF1039_0726;Dbxref=NCBI_GP:EGL40342.1;Name=EGL40342.1;Note=identified by match to protein family HMM PF00675%3B match to protein family HMM PF05193%3B match to protein family HMM PF08367;gbkey=CDS;locus_tag=HMPREF1039_0726;product=peptidase M16 inactive domain protein;protein_id=EGL40342.1;transl_table=11
AFIJ01000029.1	Genbank	gene	67749	68420	.	-	.	ID=gene-HMPREF1039_0727;Name=HMPREF1039_0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0727
AFIJ01000029.1	Genbank	CDS	67749	68420	.	-	0	ID=cds-EGL40263.1;Parent=gene-HMPREF1039_0727;Dbxref=NCBI_GP:EGL40263.1;Name=EGL40263.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;locus_tag=HMPREF1039_0727;product=5'-nucleotidase;protein_id=EGL40263.1;transl_table=11
AFIJ01000029.1	Genbank	gene	68641	69159	.	+	.	ID=gene-HMPREF1039_0728;Name=HMPREF1039_0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0728
AFIJ01000029.1	Genbank	CDS	68641	69159	.	+	0	ID=cds-EGL40333.1;Parent=gene-HMPREF1039_0728;Dbxref=NCBI_GP:EGL40333.1;Name=EGL40333.1;gbkey=CDS;locus_tag=HMPREF1039_0728;product=hypothetical protein;protein_id=EGL40333.1;transl_table=11
AFIJ01000029.1	Genbank	gene	69248	69799	.	+	.	ID=gene-HMPREF1039_0729;Name=HMPREF1039_0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0729
AFIJ01000029.1	Genbank	CDS	69248	69799	.	+	0	ID=cds-EGL40244.1;Parent=gene-HMPREF1039_0729;Dbxref=NCBI_GP:EGL40244.1;Name=EGL40244.1;Note=identified by match to protein family HMM PF00149%3B match to protein family HMM TIGR00040;gbkey=CDS;locus_tag=HMPREF1039_0729;product=phosphodiesterase family protein;protein_id=EGL40244.1;transl_table=11
AFIJ01000029.1	Genbank	gene	69991	71166	.	-	.	ID=gene-HMPREF1039_0730;Name=HMPREF1039_0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0730
AFIJ01000029.1	Genbank	CDS	69991	71166	.	-	0	ID=cds-EGL40267.1;Parent=gene-HMPREF1039_0730;Dbxref=NCBI_GP:EGL40267.1;Name=EGL40267.1;Note=identified by match to protein family HMM PF01808;gbkey=CDS;locus_tag=HMPREF1039_0730;product=AICARFT/IMPCHase bienzyme;protein_id=EGL40267.1;transl_table=11
AFIJ01000029.1	Genbank	gene	71135	71287	.	-	.	ID=gene-HMPREF1039_0731;Name=HMPREF1039_0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0731
AFIJ01000029.1	Genbank	CDS	71135	71287	.	-	0	ID=cds-EGL40257.1;Parent=gene-HMPREF1039_0731;Dbxref=NCBI_GP:EGL40257.1;Name=EGL40257.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0731;product=hypothetical protein;protein_id=EGL40257.1;transl_table=11
AFIJ01000029.1	Genbank	gene	71300	71422	.	-	.	ID=gene-HMPREF1039_0732;Name=HMPREF1039_0732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0732
AFIJ01000029.1	Genbank	CDS	71300	71422	.	-	0	ID=cds-EGL40252.1;Parent=gene-HMPREF1039_0732;Dbxref=NCBI_GP:EGL40252.1;Name=EGL40252.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0732;product=hypothetical protein;protein_id=EGL40252.1;transl_table=11
AFIJ01000029.1	Genbank	gene	71593	77091	.	+	.	ID=gene-HMPREF1039_0733;Name=HMPREF1039_0733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0733
AFIJ01000029.1	Genbank	CDS	71593	77091	.	+	0	ID=cds-EGL40288.1;Parent=gene-HMPREF1039_0733;Dbxref=NCBI_GP:EGL40288.1;Name=EGL40288.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;locus_tag=HMPREF1039_0733;product=TonB-dependent receptor plug domain protein;protein_id=EGL40288.1;transl_table=11
AFIJ01000029.1	Genbank	gene	77173	78135	.	-	.	ID=gene-HMPREF1039_0734;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0734
AFIJ01000029.1	Genbank	CDS	77173	78135	.	-	0	ID=cds-EGL40273.1;Parent=gene-HMPREF1039_0734;Dbxref=NCBI_GP:EGL40273.1;Name=EGL40273.1;Note=identified by match to protein family HMM PF01687%3B match to protein family HMM PF06574%3B match to protein family HMM TIGR00083;gbkey=CDS;gene=ribF;locus_tag=HMPREF1039_0734;product=riboflavin biosynthesis protein RibF;protein_id=EGL40273.1;transl_table=11
AFIJ01000029.1	Genbank	gene	78149	79027	.	-	.	ID=gene-HMPREF1039_0735;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0735
AFIJ01000029.1	Genbank	CDS	78149	79027	.	-	0	ID=cds-EGL40279.1;Parent=gene-HMPREF1039_0735;Dbxref=NCBI_GP:EGL40279.1;Name=EGL40279.1;Note=identified by match to protein family HMM PF01509%3B match to protein family HMM TIGR00431;gbkey=CDS;gene=truB;locus_tag=HMPREF1039_0735;product=tRNA pseudouridine synthase B;protein_id=EGL40279.1;transl_table=11
AFIJ01000029.1	Genbank	gene	79024	79968	.	-	.	ID=gene-HMPREF1039_0736;Name=HMPREF1039_0736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0736
AFIJ01000029.1	Genbank	CDS	79024	79968	.	-	0	ID=cds-EGL40341.1;Parent=gene-HMPREF1039_0736;Dbxref=NCBI_GP:EGL40341.1;Name=EGL40341.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272;gbkey=CDS;locus_tag=HMPREF1039_0736;product=DHHA1 domain protein;protein_id=EGL40341.1;transl_table=11
AFIJ01000029.1	Genbank	gene	79972	80319	.	-	.	ID=gene-HMPREF1039_0737;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0737
AFIJ01000029.1	Genbank	CDS	79972	80319	.	-	0	ID=cds-EGL40332.1;Parent=gene-HMPREF1039_0737;Dbxref=NCBI_GP:EGL40332.1;Name=EGL40332.1;Note=identified by match to protein family HMM PF02033%3B match to protein family HMM TIGR00082;gbkey=CDS;gene=rbfA;locus_tag=HMPREF1039_0737;product=ribosome-binding factor A;protein_id=EGL40332.1;transl_table=11
AFIJ01000029.1	Genbank	gene	80334	82760	.	-	.	ID=gene-HMPREF1039_0738;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0738
AFIJ01000029.1	Genbank	CDS	80334	82760	.	-	0	ID=cds-EGL40265.1;Parent=gene-HMPREF1039_0738;Dbxref=NCBI_GP:EGL40265.1;Name=EGL40265.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM PF04760%3B match to protein family HMM PF08477%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00487;gbkey=CDS;gene=infB;locus_tag=HMPREF1039_0738;product=translation initiation factor IF-2;protein_id=EGL40265.1;transl_table=11
AFIJ01000029.1	Genbank	gene	82774	83088	.	-	.	ID=gene-HMPREF1039_0739;Name=HMPREF1039_0739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0739
AFIJ01000029.1	Genbank	CDS	82774	83088	.	-	0	ID=cds-EGL40258.1;Parent=gene-HMPREF1039_0739;Dbxref=NCBI_GP:EGL40258.1;Name=EGL40258.1;Note=identified by match to protein family HMM PF01248;gbkey=CDS;locus_tag=HMPREF1039_0739;product=ribosomal protein L7Ae;protein_id=EGL40258.1;transl_table=11
AFIJ01000029.1	Genbank	gene	83085	83315	.	-	.	ID=gene-HMPREF1039_0740;Name=HMPREF1039_0740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0740
AFIJ01000029.1	Genbank	CDS	83085	83315	.	-	0	ID=cds-EGL40310.1;Parent=gene-HMPREF1039_0740;Dbxref=NCBI_GP:EGL40310.1;Name=EGL40310.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04296;gbkey=CDS;locus_tag=HMPREF1039_0740;product=hypothetical protein;protein_id=EGL40310.1;transl_table=11
AFIJ01000029.1	Genbank	gene	83355	84473	.	-	.	ID=gene-HMPREF1039_0741;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0741
AFIJ01000029.1	Genbank	CDS	83355	84473	.	-	0	ID=cds-EGL40312.1;Parent=gene-HMPREF1039_0741;Dbxref=NCBI_GP:EGL40312.1;Name=EGL40312.1;Note=identified by match to protein family HMM PF00575%3B match to protein family HMM PF08529%3B match to protein family HMM TIGR01953;gbkey=CDS;gene=nusA;locus_tag=HMPREF1039_0741;product=transcription termination factor NusA;protein_id=EGL40312.1;transl_table=11
AFIJ01000029.1	Genbank	gene	84488	84955	.	-	.	ID=gene-HMPREF1039_0742;Name=HMPREF1039_0742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0742
AFIJ01000029.1	Genbank	CDS	84488	84955	.	-	0	ID=cds-EGL40243.1;Parent=gene-HMPREF1039_0742;Dbxref=NCBI_GP:EGL40243.1;Name=EGL40243.1;Note=identified by match to protein family HMM PF02576;gbkey=CDS;locus_tag=HMPREF1039_0742;product=hypothetical protein;protein_id=EGL40243.1;transl_table=11
AFIJ01000029.1	Genbank	gene	85031	85693	.	-	.	ID=gene-HMPREF1039_0743;Name=HMPREF1039_0743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0743
AFIJ01000029.1	Genbank	CDS	85031	85693	.	-	0	ID=cds-EGL40253.1;Parent=gene-HMPREF1039_0743;Dbxref=NCBI_GP:EGL40253.1;Name=EGL40253.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0743;product=hypothetical protein;protein_id=EGL40253.1;transl_table=11
AFIJ01000029.1	Genbank	gene	85766	85850	.	-	.	ID=gene-HMPREF1039_0744;Name=HMPREF1039_0744;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0744
AFIJ01000029.1	Genbank	tRNA	85766	85850	.	-	.	ID=rna-HMPREF1039_0744;Parent=gene-HMPREF1039_0744;gbkey=tRNA;locus_tag=HMPREF1039_0744;product=tRNA-Leu
AFIJ01000029.1	Genbank	exon	85766	85850	.	-	.	ID=exon-HMPREF1039_0744-1;Parent=rna-HMPREF1039_0744;gbkey=tRNA;locus_tag=HMPREF1039_0744;product=tRNA-Leu
AFIJ01000029.1	Genbank	gene	85867	86448	.	-	.	ID=gene-HMPREF1039_0745;Name=HMPREF1039_0745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0745
AFIJ01000029.1	Genbank	CDS	85867	86448	.	-	0	ID=cds-EGL40286.1;Parent=gene-HMPREF1039_0745;Dbxref=NCBI_GP:EGL40286.1;Name=EGL40286.1;Note=identified by match to protein family HMM PF01464;gbkey=CDS;locus_tag=HMPREF1039_0745;product=transglycosylase SLT domain protein;protein_id=EGL40286.1;transl_table=11
AFIJ01000029.1	Genbank	gene	86445	87065	.	-	.	ID=gene-HMPREF1039_0746;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0746
AFIJ01000029.1	Genbank	CDS	86445	87065	.	-	0	ID=cds-EGL40256.1;Parent=gene-HMPREF1039_0746;Dbxref=NCBI_GP:EGL40256.1;Name=EGL40256.1;Note=identified by match to protein family HMM PF01121%3B match to protein family HMM TIGR00152;gbkey=CDS;gene=coaE;locus_tag=HMPREF1039_0746;product=dephospho-CoA kinase;protein_id=EGL40256.1;transl_table=11
AFIJ01000029.1	Genbank	gene	87058	87900	.	-	.	ID=gene-HMPREF1039_0747;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=HMPREF1039_0747
AFIJ01000029.1	Genbank	CDS	87058	87900	.	-	0	ID=cds-EGL40272.1;Parent=gene-HMPREF1039_0747;Dbxref=NCBI_GP:EGL40272.1;Name=EGL40272.1;Note=identified by match to protein family HMM PF01149%3B match to protein family HMM PF06827%3B match to protein family HMM PF06831%3B match to protein family HMM TIGR00577;gbkey=CDS;gene=mutM;locus_tag=HMPREF1039_0747;product=DNA-formamidopyrimidine glycosylase;protein_id=EGL40272.1;transl_table=11
AFIJ01000029.1	Genbank	gene	87911	90484	.	-	.	ID=gene-HMPREF1039_0748;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0748
AFIJ01000029.1	Genbank	CDS	87911	90484	.	-	0	ID=cds-EGL40262.1;Parent=gene-HMPREF1039_0748;Dbxref=NCBI_GP:EGL40262.1;Name=EGL40262.1;Note=identified by match to protein family HMM PF00476%3B match to protein family HMM PF01367%3B match to protein family HMM PF02739%3B match to protein family HMM TIGR00593;gbkey=CDS;gene=polA;locus_tag=HMPREF1039_0748;product=DNA-directed DNA polymerase;protein_id=EGL40262.1;transl_table=11
AFIJ01000029.1	Genbank	gene	90496	90891	.	-	.	ID=gene-HMPREF1039_0749;Name=HMPREF1039_0749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0749
AFIJ01000029.1	Genbank	CDS	90496	90891	.	-	0	ID=cds-EGL40335.1;Parent=gene-HMPREF1039_0749;Dbxref=NCBI_GP:EGL40335.1;Name=EGL40335.1;gbkey=CDS;locus_tag=HMPREF1039_0749;product=hypothetical protein;protein_id=EGL40335.1;transl_table=11
AFIJ01000029.1	Genbank	gene	91078	92079	.	-	.	ID=gene-HMPREF1039_0750;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0750
AFIJ01000029.1	Genbank	CDS	91078	92079	.	-	0	ID=cds-EGL40261.1;Parent=gene-HMPREF1039_0750;Dbxref=NCBI_GP:EGL40261.1;Name=EGL40261.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;gene=etfA;locus_tag=HMPREF1039_0750;product=electron transfer flavoprotein FAD-binding domain protein;protein_id=EGL40261.1;transl_table=11
AFIJ01000029.1	Genbank	gene	92092	92880	.	-	.	ID=gene-HMPREF1039_0751;Name=HMPREF1039_0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0751
AFIJ01000029.1	Genbank	CDS	92092	92880	.	-	0	ID=cds-EGL40323.1;Parent=gene-HMPREF1039_0751;Dbxref=NCBI_GP:EGL40323.1;Name=EGL40323.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;locus_tag=HMPREF1039_0751;product=electron transfer flavoprotein domain protein;protein_id=EGL40323.1;transl_table=11
AFIJ01000029.1	Genbank	gene	92999	93154	.	-	.	ID=gene-HMPREF1039_0752;Name=HMPREF1039_0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0752
AFIJ01000029.1	Genbank	CDS	92999	93154	.	-	0	ID=cds-EGL40317.1;Parent=gene-HMPREF1039_0752;Dbxref=NCBI_GP:EGL40317.1;Name=EGL40317.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0752;product=hypothetical protein;protein_id=EGL40317.1;transl_table=11
AFIJ01000029.1	Genbank	gene	93232	93537	.	-	.	ID=gene-HMPREF1039_0753;Name=HMPREF1039_0753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0753
AFIJ01000029.1	Genbank	CDS	93232	93537	.	-	0	ID=cds-EGL40293.1;Parent=gene-HMPREF1039_0753;Dbxref=NCBI_GP:EGL40293.1;Name=EGL40293.1;gbkey=CDS;locus_tag=HMPREF1039_0753;product=hypothetical protein;protein_id=EGL40293.1;transl_table=11
AFIJ01000029.1	Genbank	gene	93976	95691	.	-	.	ID=gene-HMPREF1039_0754;Name=HMPREF1039_0754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0754
AFIJ01000029.1	Genbank	CDS	93976	95691	.	-	0	ID=cds-EGL40282.1;Parent=gene-HMPREF1039_0754;Dbxref=NCBI_GP:EGL40282.1;Name=EGL40282.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF1039_0754;product=ABC transporter%2C ATP-binding protein;protein_id=EGL40282.1;transl_table=11
AFIJ01000029.1	Genbank	gene	95816	98335	.	-	.	ID=gene-HMPREF1039_0755;Name=HMPREF1039_0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0755
AFIJ01000029.1	Genbank	CDS	95816	98335	.	-	0	ID=cds-EGL40278.1;Parent=gene-HMPREF1039_0755;Dbxref=NCBI_GP:EGL40278.1;Name=EGL40278.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;locus_tag=HMPREF1039_0755;product=TonB-dependent receptor;protein_id=EGL40278.1;transl_table=11
AFIJ01000029.1	Genbank	gene	98372	99160	.	-	.	ID=gene-HMPREF1039_0756;Name=fhuC;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0756
AFIJ01000029.1	Genbank	CDS	98372	99160	.	-	0	ID=cds-EGL40298.1;Parent=gene-HMPREF1039_0756;Dbxref=NCBI_GP:EGL40298.1;Name=EGL40298.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=fhuC;locus_tag=HMPREF1039_0756;product=ferrichrome ABC transporter%2C ATP-binding protein FhuC;protein_id=EGL40298.1;transl_table=11
AFIJ01000029.1	Genbank	gene	99153	100166	.	-	.	ID=gene-HMPREF1039_0757;Name=HMPREF1039_0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0757
AFIJ01000029.1	Genbank	CDS	99153	100166	.	-	0	ID=cds-EGL40292.1;Parent=gene-HMPREF1039_0757;Dbxref=NCBI_GP:EGL40292.1;Name=EGL40292.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF1039_0757;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EGL40292.1;transl_table=11
AFIJ01000029.1	Genbank	gene	100163	101128	.	-	.	ID=gene-HMPREF1039_0758;Name=HMPREF1039_0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0758
AFIJ01000029.1	Genbank	CDS	100163	101128	.	-	0	ID=cds-EGL40276.1;Parent=gene-HMPREF1039_0758;Dbxref=NCBI_GP:EGL40276.1;Name=EGL40276.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF1039_0758;product=periplasmic binding protein;protein_id=EGL40276.1;transl_table=11
AFIJ01000029.1	Genbank	gene	101371	101802	.	+	.	ID=gene-HMPREF1039_0759;Name=HMPREF1039_0759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0759
AFIJ01000029.1	Genbank	CDS	101371	101802	.	+	0	ID=cds-EGL40285.1;Parent=gene-HMPREF1039_0759;Dbxref=NCBI_GP:EGL40285.1;Name=EGL40285.1;gbkey=CDS;locus_tag=HMPREF1039_0759;product=hypothetical protein;protein_id=EGL40285.1;transl_table=11
AFIJ01000029.1	Genbank	gene	102063	102236	.	-	.	ID=gene-HMPREF1039_0760;Name=HMPREF1039_0760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0760
AFIJ01000029.1	Genbank	CDS	102063	102236	.	-	0	ID=cds-EGL40309.1;Parent=gene-HMPREF1039_0760;Dbxref=NCBI_GP:EGL40309.1;Name=EGL40309.1;gbkey=CDS;locus_tag=HMPREF1039_0760;product=hypothetical protein;protein_id=EGL40309.1;transl_table=11
AFIJ01000029.1	Genbank	gene	102236	102673	.	-	.	ID=gene-HMPREF1039_0761;Name=vsr;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=HMPREF1039_0761
AFIJ01000029.1	Genbank	CDS	102236	102673	.	-	0	ID=cds-EGL40328.1;Parent=gene-HMPREF1039_0761;Dbxref=NCBI_GP:EGL40328.1;Name=EGL40328.1;Note=identified by match to protein family HMM PF03852%3B match to protein family HMM TIGR00632;gbkey=CDS;gene=vsr;locus_tag=HMPREF1039_0761;product=DNA mismatch endonuclease Vsr;protein_id=EGL40328.1;transl_table=11
AFIJ01000029.1	Genbank	gene	102887	103552	.	-	.	ID=gene-HMPREF1039_0762;Name=HMPREF1039_0762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0762
AFIJ01000029.1	Genbank	CDS	102887	103552	.	-	0	ID=cds-EGL40300.1;Parent=gene-HMPREF1039_0762;Dbxref=NCBI_GP:EGL40300.1;Name=EGL40300.1;gbkey=CDS;locus_tag=HMPREF1039_0762;product=RNA polymerase sigma factor%2C sigma-70 family;protein_id=EGL40300.1;transl_table=11
AFIJ01000029.1	Genbank	gene	103624	103857	.	-	.	ID=gene-HMPREF1039_0763;Name=HMPREF1039_0763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0763
AFIJ01000029.1	Genbank	CDS	103624	103857	.	-	0	ID=cds-EGL40331.1;Parent=gene-HMPREF1039_0763;Dbxref=NCBI_GP:EGL40331.1;Name=EGL40331.1;gbkey=CDS;locus_tag=HMPREF1039_0763;product=hypothetical protein;protein_id=EGL40331.1;transl_table=11
AFIJ01000029.1	Genbank	gene	103890	104087	.	-	.	ID=gene-HMPREF1039_0764;Name=HMPREF1039_0764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0764
AFIJ01000029.1	Genbank	CDS	103890	104087	.	-	0	ID=cds-EGL40251.1;Parent=gene-HMPREF1039_0764;Dbxref=NCBI_GP:EGL40251.1;Name=EGL40251.1;gbkey=CDS;locus_tag=HMPREF1039_0764;product=hypothetical protein;protein_id=EGL40251.1;transl_table=11
AFIJ01000029.1	Genbank	gene	104112	104645	.	-	.	ID=gene-HMPREF1039_0765;Name=HMPREF1039_0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0765
AFIJ01000029.1	Genbank	CDS	104112	104645	.	-	0	ID=cds-EGL40327.1;Parent=gene-HMPREF1039_0765;Dbxref=NCBI_GP:EGL40327.1;Name=EGL40327.1;Note=identified by match to protein family HMM PF01520;gbkey=CDS;locus_tag=HMPREF1039_0765;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EGL40327.1;transl_table=11
AFIJ01000029.1	Genbank	gene	104617	104865	.	-	.	ID=gene-HMPREF1039_0766;Name=HMPREF1039_0766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0766
AFIJ01000029.1	Genbank	CDS	104617	104865	.	-	0	ID=cds-EGL40319.1;Parent=gene-HMPREF1039_0766;Dbxref=NCBI_GP:EGL40319.1;Name=EGL40319.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0766;product=hypothetical protein;protein_id=EGL40319.1;transl_table=11
##sequence-region AFIJ01000028.1 1 3598
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000028.1	Genbank	region	1	3598	.	+	.	ID=AFIJ01000028.1:1..3598;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000028.1	Genbank	gene	31	978	.	-	.	ID=gene-HMPREF1039_1612;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=HMPREF1039_1612
AFIJ01000028.1	Genbank	CDS	31	978	.	-	0	ID=cds-EGL40400.1;Parent=gene-HMPREF1039_1612;Dbxref=NCBI_GP:EGL40400.1;Name=EGL40400.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF04198;gbkey=CDS;gene=deoR;locus_tag=HMPREF1039_1612;product=deoxyribonucleoside regulator;protein_id=EGL40400.1;transl_table=11
AFIJ01000028.1	Genbank	gene	1294	2796	.	+	.	ID=gene-HMPREF1039_1613;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1613
AFIJ01000028.1	Genbank	CDS	1294	2796	.	+	0	ID=cds-EGL40402.1;Parent=gene-HMPREF1039_1613;Dbxref=NCBI_GP:EGL40402.1;Name=EGL40402.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782%3B match to protein family HMM TIGR01311;gbkey=CDS;gene=glpK;locus_tag=HMPREF1039_1613;product=glycerol kinase;protein_id=EGL40402.1;transl_table=11
AFIJ01000028.1	Genbank	gene	2827	3552	.	+	.	ID=gene-HMPREF1039_1614;Name=HMPREF1039_1614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1614
AFIJ01000028.1	Genbank	CDS	2827	3552	.	+	0	ID=cds-EGL40401.1;Parent=gene-HMPREF1039_1614;Dbxref=NCBI_GP:EGL40401.1;Name=EGL40401.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00230;gbkey=CDS;locus_tag=HMPREF1039_1614;product=MIP family channel protein;protein_id=EGL40401.1;transl_table=11
##sequence-region AFIJ01000027.1 1 12043
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000027.1	Genbank	region	1	12043	.	+	.	ID=AFIJ01000027.1:1..12043;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000027.1	Genbank	gene	1	772	.	-	.	ID=gene-HMPREF1039_1561;Name=HMPREF1039_1561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1561;partial=true;start_range=.,1
AFIJ01000027.1	Genbank	CDS	1	772	.	-	0	ID=cds-EGL40424.1;Parent=gene-HMPREF1039_1561;Dbxref=NCBI_GP:EGL40424.1;Name=EGL40424.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF1039_1561;partial=true;product=putative membrane protein;protein_id=EGL40424.1;start_range=.,1;transl_table=11
AFIJ01000027.1	Genbank	gene	961	1191	.	+	.	ID=gene-HMPREF1039_1562;Name=HMPREF1039_1562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1562
AFIJ01000027.1	Genbank	CDS	961	1191	.	+	0	ID=cds-EGL40422.1;Parent=gene-HMPREF1039_1562;Dbxref=NCBI_GP:EGL40422.1;Name=EGL40422.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1562;product=hypothetical protein;protein_id=EGL40422.1;transl_table=11
AFIJ01000027.1	Genbank	gene	1242	5807	.	-	.	ID=gene-HMPREF1039_1563;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1563
AFIJ01000027.1	Genbank	CDS	1242	5807	.	-	0	ID=cds-EGL40419.1;Parent=gene-HMPREF1039_1563;Dbxref=NCBI_GP:EGL40419.1;Name=EGL40419.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01493%3B match to protein family HMM PF01645%3B match to protein family HMM PF04898;gbkey=CDS;gene=gltA;locus_tag=HMPREF1039_1563;product=class II glutamine amidotransferase;protein_id=EGL40419.1;transl_table=11
AFIJ01000027.1	Genbank	gene	5800	5982	.	-	.	ID=gene-HMPREF1039_1564;Name=HMPREF1039_1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1564
AFIJ01000027.1	Genbank	CDS	5800	5982	.	-	0	ID=cds-EGL40421.1;Parent=gene-HMPREF1039_1564;Dbxref=NCBI_GP:EGL40421.1;Name=EGL40421.1;gbkey=CDS;locus_tag=HMPREF1039_1564;product=hypothetical protein;protein_id=EGL40421.1;transl_table=11
AFIJ01000027.1	Genbank	gene	5979	6686	.	-	.	ID=gene-HMPREF1039_1565;Name=HMPREF1039_1565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1565
AFIJ01000027.1	Genbank	CDS	5979	6686	.	-	0	ID=cds-EGL40423.1;Parent=gene-HMPREF1039_1565;Dbxref=NCBI_GP:EGL40423.1;Name=EGL40423.1;gbkey=CDS;locus_tag=HMPREF1039_1565;product=hypothetical protein;protein_id=EGL40423.1;transl_table=11
AFIJ01000027.1	Genbank	gene	6699	8303	.	-	.	ID=gene-HMPREF1039_1566;Name=HMPREF1039_1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1566
AFIJ01000027.1	Genbank	CDS	6699	8303	.	-	0	ID=cds-EGL40428.1;Parent=gene-HMPREF1039_1566;Dbxref=NCBI_GP:EGL40428.1;Name=EGL40428.1;Note=identified by match to protein family HMM PF02366;gbkey=CDS;locus_tag=HMPREF1039_1566;product=dolichyl-phosphate-mannose-protein mannosyltransferase;protein_id=EGL40428.1;transl_table=11
AFIJ01000027.1	Genbank	gene	8315	10459	.	-	.	ID=gene-HMPREF1039_1567;Name=HMPREF1039_1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1567
AFIJ01000027.1	Genbank	CDS	8315	10459	.	-	0	ID=cds-EGL40425.1;Parent=gene-HMPREF1039_1567;Dbxref=NCBI_GP:EGL40425.1;Name=EGL40425.1;Note=identified by match to protein family HMM PF02366%3B match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF1039_1567;product=dolichyl-phosphate-mannose-protein mannosyltransferase;protein_id=EGL40425.1;transl_table=11
AFIJ01000027.1	Genbank	gene	10626	11345	.	+	.	ID=gene-HMPREF1039_1568;Name=HMPREF1039_1568;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1568
AFIJ01000027.1	Genbank	CDS	10626	11345	.	+	0	ID=cds-EGL40420.1;Parent=gene-HMPREF1039_1568;Dbxref=NCBI_GP:EGL40420.1;Name=EGL40420.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF02308;gbkey=CDS;locus_tag=HMPREF1039_1568;product=ACT domain protein;protein_id=EGL40420.1;transl_table=11
AFIJ01000027.1	Genbank	gene	11415	11654	.	-	.	ID=gene-HMPREF1039_1569;Name=HMPREF1039_1569;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1569
AFIJ01000027.1	Genbank	CDS	11415	11654	.	-	0	ID=cds-EGL40427.1;Parent=gene-HMPREF1039_1569;Dbxref=NCBI_GP:EGL40427.1;Name=EGL40427.1;gbkey=CDS;locus_tag=HMPREF1039_1569;product=hypothetical protein;protein_id=EGL40427.1;transl_table=11
AFIJ01000027.1	Genbank	gene	11687	11884	.	-	.	ID=gene-HMPREF1039_1570;Name=HMPREF1039_1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1570
AFIJ01000027.1	Genbank	CDS	11687	11884	.	-	0	ID=cds-EGL40426.1;Parent=gene-HMPREF1039_1570;Dbxref=NCBI_GP:EGL40426.1;Name=EGL40426.1;gbkey=CDS;locus_tag=HMPREF1039_1570;product=hypothetical protein;protein_id=EGL40426.1;transl_table=11
##sequence-region AFIJ01000026.1 1 50184
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000026.1	Genbank	region	1	50184	.	+	.	ID=AFIJ01000026.1:1..50184;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000026.1	Genbank	gene	1	731	.	-	.	ID=gene-HMPREF1039_1260;Name=HMPREF1039_1260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1260;partial=true;start_range=.,1
AFIJ01000026.1	Genbank	CDS	1	731	.	-	0	ID=cds-EGL40501.1;Parent=gene-HMPREF1039_1260;Dbxref=NCBI_GP:EGL40501.1;Name=EGL40501.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_1260;partial=true;product=hypothetical protein;protein_id=EGL40501.1;start_range=.,1;transl_table=11
AFIJ01000026.1	Genbank	gene	1135	2127	.	-	.	ID=gene-HMPREF1039_1261;Name=HMPREF1039_1261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1261
AFIJ01000026.1	Genbank	CDS	1135	2127	.	-	0	ID=cds-EGL40490.1;Parent=gene-HMPREF1039_1261;Dbxref=NCBI_GP:EGL40490.1;Name=EGL40490.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1261;product=hypothetical protein;protein_id=EGL40490.1;transl_table=11
AFIJ01000026.1	Genbank	gene	2124	11291	.	-	.	ID=gene-HMPREF1039_1262;Name=HMPREF1039_1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1262
AFIJ01000026.1	Genbank	CDS	2124	11291	.	-	0	ID=cds-EGL40470.1;Parent=gene-HMPREF1039_1262;Dbxref=NCBI_GP:EGL40470.1;Name=EGL40470.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1262;product=Hep/Hag repeat protein;protein_id=EGL40470.1;transl_table=11
AFIJ01000026.1	Genbank	gene	11876	12259	.	-	.	ID=gene-HMPREF1039_1263;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1263
AFIJ01000026.1	Genbank	CDS	11876	12259	.	-	0	ID=cds-EGL40474.1;Parent=gene-HMPREF1039_1263;Dbxref=NCBI_GP:EGL40474.1;Name=EGL40474.1;Note=identified by match to protein family HMM PF02261%3B match to protein family HMM TIGR00223;gbkey=CDS;gene=panD;locus_tag=HMPREF1039_1263;product=aspartate 1-decarboxylase;protein_id=EGL40474.1;transl_table=11
AFIJ01000026.1	Genbank	gene	12262	13116	.	-	.	ID=gene-HMPREF1039_1264;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1264
AFIJ01000026.1	Genbank	CDS	12262	13116	.	-	0	ID=cds-EGL40488.1;Parent=gene-HMPREF1039_1264;Dbxref=NCBI_GP:EGL40488.1;Name=EGL40488.1;Note=identified by match to protein family HMM PF02569%3B match to protein family HMM TIGR00018%3B match to protein family HMM TIGR00125;gbkey=CDS;gene=panC;locus_tag=HMPREF1039_1264;product=pantoate--beta-alanine ligase;protein_id=EGL40488.1;transl_table=11
AFIJ01000026.1	Genbank	gene	13297	13512	.	+	.	ID=gene-HMPREF1039_1265;Name=HMPREF1039_1265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1265
AFIJ01000026.1	Genbank	CDS	13297	13512	.	+	0	ID=cds-EGL40478.1;Parent=gene-HMPREF1039_1265;Dbxref=NCBI_GP:EGL40478.1;Name=EGL40478.1;gbkey=CDS;locus_tag=HMPREF1039_1265;product=hypothetical protein;protein_id=EGL40478.1;transl_table=11
AFIJ01000026.1	Genbank	gene	13506	15233	.	-	.	ID=gene-HMPREF1039_1266;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1266
AFIJ01000026.1	Genbank	CDS	13506	15233	.	-	0	ID=cds-EGL40477.1;Parent=gene-HMPREF1039_1266;Dbxref=NCBI_GP:EGL40477.1;Name=EGL40477.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM PF04073%3B match to protein family HMM TIGR00409;gbkey=CDS;gene=proS;locus_tag=HMPREF1039_1266;product=proline--tRNA ligase;protein_id=EGL40477.1;transl_table=11
AFIJ01000026.1	Genbank	gene	15421	16359	.	-	.	ID=gene-HMPREF1039_1267;Name=cbiK;gbkey=Gene;gene=cbiK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1267
AFIJ01000026.1	Genbank	CDS	15421	16359	.	-	0	ID=cds-EGL40507.1;Parent=gene-HMPREF1039_1267;Dbxref=NCBI_GP:EGL40507.1;Name=EGL40507.1;Note=identified by match to protein family HMM PF06180;gbkey=CDS;gene=cbiK;locus_tag=HMPREF1039_1267;product=cobalt chelatase (CbiK);protein_id=EGL40507.1;transl_table=11
AFIJ01000026.1	Genbank	gene	16456	17658	.	-	.	ID=gene-HMPREF1039_1268;Name=hydF;gbkey=Gene;gene=hydF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1268
AFIJ01000026.1	Genbank	CDS	16456	17658	.	-	0	ID=cds-EGL40506.1;Parent=gene-HMPREF1039_1268;Dbxref=NCBI_GP:EGL40506.1;Name=EGL40506.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR03918;gbkey=CDS;gene=hydF;locus_tag=HMPREF1039_1268;product=hydrogenase maturation GTPase HydF;protein_id=EGL40506.1;transl_table=11
AFIJ01000026.1	Genbank	gene	17683	18870	.	-	.	ID=gene-HMPREF1039_1269;Name=HMPREF1039_1269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1269
AFIJ01000026.1	Genbank	CDS	17683	18870	.	-	0	ID=cds-EGL40496.1;Parent=gene-HMPREF1039_1269;Dbxref=NCBI_GP:EGL40496.1;Name=EGL40496.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;locus_tag=HMPREF1039_1269;product=oxidoreductase%2C nitrogenase component 1;protein_id=EGL40496.1;transl_table=11
AFIJ01000026.1	Genbank	gene	18861	20186	.	-	.	ID=gene-HMPREF1039_1270;Name=HMPREF1039_1270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1270
AFIJ01000026.1	Genbank	CDS	18861	20186	.	-	0	ID=cds-EGL40491.1;Parent=gene-HMPREF1039_1270;Dbxref=NCBI_GP:EGL40491.1;Name=EGL40491.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1270;product=hypothetical protein;protein_id=EGL40491.1;transl_table=11
AFIJ01000026.1	Genbank	gene	20191	20946	.	-	.	ID=gene-HMPREF1039_1271;Name=HMPREF1039_1271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1271
AFIJ01000026.1	Genbank	CDS	20191	20946	.	-	0	ID=cds-EGL40489.1;Parent=gene-HMPREF1039_1271;Dbxref=NCBI_GP:EGL40489.1;Name=EGL40489.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;locus_tag=HMPREF1039_1271;product=putative nitrogenase iron protein;protein_id=EGL40489.1;transl_table=11
AFIJ01000026.1	Genbank	gene	20983	21987	.	-	.	ID=gene-HMPREF1039_1272;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1272
AFIJ01000026.1	Genbank	CDS	20983	21987	.	-	0	ID=cds-EGL40481.1;Parent=gene-HMPREF1039_1272;Dbxref=NCBI_GP:EGL40481.1;Name=EGL40481.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR02124;gbkey=CDS;gene=hypE;locus_tag=HMPREF1039_1272;product=hydrogenase expression/formation protein HypE;protein_id=EGL40481.1;transl_table=11
AFIJ01000026.1	Genbank	gene	21984	23039	.	-	.	ID=gene-HMPREF1039_1273;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1273
AFIJ01000026.1	Genbank	CDS	21984	23039	.	-	0	ID=cds-EGL40479.1;Parent=gene-HMPREF1039_1273;Dbxref=NCBI_GP:EGL40479.1;Name=EGL40479.1;Note=identified by match to protein family HMM PF01924;gbkey=CDS;gene=hypD;locus_tag=HMPREF1039_1273;product=hydrogenase formation hypA family;protein_id=EGL40479.1;transl_table=11
AFIJ01000026.1	Genbank	gene	23041	23247	.	-	.	ID=gene-HMPREF1039_1274;Name=hypC;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1274
AFIJ01000026.1	Genbank	CDS	23041	23247	.	-	0	ID=cds-EGL40494.1;Parent=gene-HMPREF1039_1274;Dbxref=NCBI_GP:EGL40494.1;Name=EGL40494.1;Note=identified by match to protein family HMM PF01455%3B match to protein family HMM TIGR00074;gbkey=CDS;gene=hypC;locus_tag=HMPREF1039_1274;product=hydrogenase assembly chaperone HypC/HupF;protein_id=EGL40494.1;transl_table=11
AFIJ01000026.1	Genbank	gene	23334	25631	.	-	.	ID=gene-HMPREF1039_1275;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1275
AFIJ01000026.1	Genbank	CDS	23334	25631	.	-	0	ID=cds-EGL40493.1;Parent=gene-HMPREF1039_1275;Dbxref=NCBI_GP:EGL40493.1;Name=EGL40493.1;Note=identified by match to protein family HMM PF00708%3B match to protein family HMM PF01300%3B match to protein family HMM PF07503%3B match to protein family HMM TIGR00143;gbkey=CDS;gene=hypF;locus_tag=HMPREF1039_1275;product=carbamoyltransferase HypF;protein_id=EGL40493.1;transl_table=11
AFIJ01000026.1	Genbank	gene	25634	26665	.	-	.	ID=gene-HMPREF1039_1276;Name=HMPREF1039_1276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1276
AFIJ01000026.1	Genbank	CDS	25634	26665	.	-	0	ID=cds-EGL40467.1;Parent=gene-HMPREF1039_1276;Dbxref=NCBI_GP:EGL40467.1;Name=EGL40467.1;gbkey=CDS;locus_tag=HMPREF1039_1276;product=hypothetical protein;protein_id=EGL40467.1;transl_table=11
AFIJ01000026.1	Genbank	gene	26662	27966	.	-	.	ID=gene-HMPREF1039_1277;Name=HMPREF1039_1277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1277
AFIJ01000026.1	Genbank	CDS	26662	27966	.	-	0	ID=cds-EGL40485.1;Parent=gene-HMPREF1039_1277;Dbxref=NCBI_GP:EGL40485.1;Name=EGL40485.1;Note=identified by match to protein family HMM PF00148;gbkey=CDS;locus_tag=HMPREF1039_1277;product=oxidoreductase%2C nitrogenase component 1;protein_id=EGL40485.1;transl_table=11
AFIJ01000026.1	Genbank	gene	27966	28718	.	-	.	ID=gene-HMPREF1039_1278;Name=HMPREF1039_1278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1278
AFIJ01000026.1	Genbank	CDS	27966	28718	.	-	0	ID=cds-EGL40472.1;Parent=gene-HMPREF1039_1278;Dbxref=NCBI_GP:EGL40472.1;Name=EGL40472.1;Note=identified by match to protein family HMM PF00142;gbkey=CDS;locus_tag=HMPREF1039_1278;product=putative nitrogenase iron protein;protein_id=EGL40472.1;transl_table=11
AFIJ01000026.1	Genbank	gene	28727	28978	.	-	.	ID=gene-HMPREF1039_1279;Name=HMPREF1039_1279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1279
AFIJ01000026.1	Genbank	CDS	28727	28978	.	-	0	ID=cds-EGL40495.1;Parent=gene-HMPREF1039_1279;Dbxref=NCBI_GP:EGL40495.1;Name=EGL40495.1;Note=identified by match to protein family HMM TIGR03959;gbkey=CDS;locus_tag=HMPREF1039_1279;product=putative iron-only hydrogenase system regulator;protein_id=EGL40495.1;transl_table=11
AFIJ01000026.1	Genbank	gene	29156	30424	.	-	.	ID=gene-HMPREF1039_1280;Name=gltT;gbkey=Gene;gene=gltT;gene_biotype=protein_coding;locus_tag=HMPREF1039_1280
AFIJ01000026.1	Genbank	CDS	29156	30424	.	-	0	ID=cds-EGL40484.1;Parent=gene-HMPREF1039_1280;Dbxref=NCBI_GP:EGL40484.1;Name=EGL40484.1;Note=identified by match to protein family HMM PF00375;gbkey=CDS;gene=gltT;locus_tag=HMPREF1039_1280;product=proton/sodium-glutamate symport protein GltT;protein_id=EGL40484.1;transl_table=11
AFIJ01000026.1	Genbank	gene	30617	30820	.	+	.	ID=gene-HMPREF1039_1281;Name=HMPREF1039_1281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1281
AFIJ01000026.1	Genbank	CDS	30617	30820	.	+	0	ID=cds-EGL40480.1;Parent=gene-HMPREF1039_1281;Dbxref=NCBI_GP:EGL40480.1;Name=EGL40480.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1281;product=hypothetical protein;protein_id=EGL40480.1;transl_table=11
AFIJ01000026.1	Genbank	gene	30910	31884	.	-	.	ID=gene-HMPREF1039_1282;Name=HMPREF1039_1282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1282
AFIJ01000026.1	Genbank	CDS	30910	31884	.	-	0	ID=cds-EGL40502.1;Parent=gene-HMPREF1039_1282;Dbxref=NCBI_GP:EGL40502.1;Name=EGL40502.1;gbkey=CDS;locus_tag=HMPREF1039_1282;product=hypothetical protein;protein_id=EGL40502.1;transl_table=11
AFIJ01000026.1	Genbank	gene	32068	33282	.	-	.	ID=gene-HMPREF1039_1283;Name=HMPREF1039_1283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1283
AFIJ01000026.1	Genbank	CDS	32068	33282	.	-	0	ID=cds-EGL40498.1;Parent=gene-HMPREF1039_1283;Dbxref=NCBI_GP:EGL40498.1;Name=EGL40498.1;gbkey=CDS;locus_tag=HMPREF1039_1283;product=hypothetical protein;protein_id=EGL40498.1;transl_table=11
AFIJ01000026.1	Genbank	gene	33729	35237	.	-	.	ID=gene-HMPREF1039_1284;Name=HMPREF1039_1284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1284
AFIJ01000026.1	Genbank	CDS	33729	35237	.	-	0	ID=cds-EGL40468.1;Parent=gene-HMPREF1039_1284;Dbxref=NCBI_GP:EGL40468.1;Name=EGL40468.1;gbkey=CDS;locus_tag=HMPREF1039_1284;product=hypothetical protein;protein_id=EGL40468.1;transl_table=11
AFIJ01000026.1	Genbank	gene	35914	36843	.	-	.	ID=gene-HMPREF1039_1285;Name=HMPREF1039_1285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1285
AFIJ01000026.1	Genbank	CDS	35914	36843	.	-	0	ID=cds-EGL40476.1;Parent=gene-HMPREF1039_1285;Dbxref=NCBI_GP:EGL40476.1;Name=EGL40476.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF1039_1285;product=site-specific recombinase%2C phage integrase family;protein_id=EGL40476.1;transl_table=11
AFIJ01000026.1	Genbank	gene	37505	38953	.	-	.	ID=gene-HMPREF1039_1286;Name=HMPREF1039_1286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1286
AFIJ01000026.1	Genbank	CDS	37505	38953	.	-	0	ID=cds-EGL40503.1;Parent=gene-HMPREF1039_1286;Dbxref=NCBI_GP:EGL40503.1;Name=EGL40503.1;Note=identified by match to protein family HMM PF04326;gbkey=CDS;locus_tag=HMPREF1039_1286;product=divergent AAA domain protein;protein_id=EGL40503.1;transl_table=11
AFIJ01000026.1	Genbank	gene	39144	39896	.	-	.	ID=gene-HMPREF1039_1287;Name=HMPREF1039_1287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1287
AFIJ01000026.1	Genbank	CDS	39144	39896	.	-	0	ID=cds-EGL40469.1;Parent=gene-HMPREF1039_1287;Dbxref=NCBI_GP:EGL40469.1;Name=EGL40469.1;gbkey=CDS;locus_tag=HMPREF1039_1287;product=hypothetical protein;protein_id=EGL40469.1;transl_table=11
AFIJ01000026.1	Genbank	gene	40150	40272	.	+	.	ID=gene-HMPREF1039_1288;Name=HMPREF1039_1288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1288
AFIJ01000026.1	Genbank	CDS	40150	40272	.	+	0	ID=cds-EGL40508.1;Parent=gene-HMPREF1039_1288;Dbxref=NCBI_GP:EGL40508.1;Name=EGL40508.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1288;product=hypothetical protein;protein_id=EGL40508.1;transl_table=11
AFIJ01000026.1	Genbank	gene	40416	41579	.	-	.	ID=gene-HMPREF1039_1289;Name=HMPREF1039_1289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1289
AFIJ01000026.1	Genbank	CDS	40416	41579	.	-	0	ID=cds-EGL40487.1;Parent=gene-HMPREF1039_1289;Dbxref=NCBI_GP:EGL40487.1;Name=EGL40487.1;gbkey=CDS;locus_tag=HMPREF1039_1289;product=hypothetical protein;protein_id=EGL40487.1;transl_table=11
AFIJ01000026.1	Genbank	gene	41657	42577	.	-	.	ID=gene-HMPREF1039_1290;Name=HMPREF1039_1290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1290
AFIJ01000026.1	Genbank	CDS	41657	42577	.	-	0	ID=cds-EGL40471.1;Parent=gene-HMPREF1039_1290;Dbxref=NCBI_GP:EGL40471.1;Name=EGL40471.1;gbkey=CDS;locus_tag=HMPREF1039_1290;product=hypothetical protein;protein_id=EGL40471.1;transl_table=11
AFIJ01000026.1	Genbank	gene	42587	43195	.	-	.	ID=gene-HMPREF1039_1291;Name=HMPREF1039_1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1291
AFIJ01000026.1	Genbank	CDS	42587	43195	.	-	0	ID=cds-EGL40492.1;Parent=gene-HMPREF1039_1291;Dbxref=NCBI_GP:EGL40492.1;Name=EGL40492.1;Note=identified by match to protein family HMM PF02245%3B match to protein family HMM TIGR00567;gbkey=CDS;locus_tag=HMPREF1039_1291;product=3-methyladenine DNA glycosylase;protein_id=EGL40492.1;transl_table=11
AFIJ01000026.1	Genbank	gene	43199	43936	.	-	.	ID=gene-HMPREF1039_1292;Name=HMPREF1039_1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1292
AFIJ01000026.1	Genbank	CDS	43199	43936	.	-	0	ID=cds-EGL40486.1;Parent=gene-HMPREF1039_1292;Dbxref=NCBI_GP:EGL40486.1;Name=EGL40486.1;Note=identified by match to protein family HMM PF01614%3B match to protein family HMM PF09339;gbkey=CDS;locus_tag=HMPREF1039_1292;product=IclR helix-turn-helix domain protein;protein_id=EGL40486.1;transl_table=11
AFIJ01000026.1	Genbank	gene	43958	45037	.	-	.	ID=gene-HMPREF1039_1293;Name=HMPREF1039_1293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1293
AFIJ01000026.1	Genbank	CDS	43958	45037	.	-	0	ID=cds-EGL40473.1;Parent=gene-HMPREF1039_1293;Dbxref=NCBI_GP:EGL40473.1;Name=EGL40473.1;Note=identified by match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF1039_1293;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EGL40473.1;transl_table=11
AFIJ01000026.1	Genbank	gene	45057	45305	.	-	.	ID=gene-HMPREF1039_1294;Name=bofA;gbkey=Gene;gene=bofA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1294
AFIJ01000026.1	Genbank	CDS	45057	45305	.	-	0	ID=cds-EGL40482.1;Parent=gene-HMPREF1039_1294;Dbxref=NCBI_GP:EGL40482.1;Name=EGL40482.1;gbkey=CDS;gene=bofA;locus_tag=HMPREF1039_1294;product=pro-sigmaK processing inhibitor BofA;protein_id=EGL40482.1;transl_table=11
AFIJ01000026.1	Genbank	gene	45316	45906	.	-	.	ID=gene-HMPREF1039_1295;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF1039_1295
AFIJ01000026.1	Genbank	CDS	45316	45906	.	-	0	ID=cds-EGL40505.1;Parent=gene-HMPREF1039_1295;Dbxref=NCBI_GP:EGL40505.1;Name=EGL40505.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF02132%3B match to protein family HMM TIGR00615;gbkey=CDS;gene=recR;locus_tag=HMPREF1039_1295;product=recombination protein RecR;protein_id=EGL40505.1;transl_table=11
AFIJ01000026.1	Genbank	gene	45906	46223	.	-	.	ID=gene-HMPREF1039_1296;Name=HMPREF1039_1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1296
AFIJ01000026.1	Genbank	CDS	45906	46223	.	-	0	ID=cds-EGL40483.1;Parent=gene-HMPREF1039_1296;Dbxref=NCBI_GP:EGL40483.1;Name=EGL40483.1;Note=identified by match to protein family HMM PF02575%3B match to protein family HMM TIGR00103;gbkey=CDS;locus_tag=HMPREF1039_1296;product=DNA-binding protein%2C YbaB/EbfC family;protein_id=EGL40483.1;transl_table=11
AFIJ01000026.1	Genbank	gene	46242	46406	.	-	.	ID=gene-HMPREF1039_1297;Name=HMPREF1039_1297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1297
AFIJ01000026.1	Genbank	CDS	46242	46406	.	-	0	ID=cds-EGL40500.1;Parent=gene-HMPREF1039_1297;Dbxref=NCBI_GP:EGL40500.1;Name=EGL40500.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1297;product=hypothetical protein;protein_id=EGL40500.1;transl_table=11
AFIJ01000026.1	Genbank	gene	46430	47701	.	-	.	ID=gene-HMPREF1039_1298;Name=HMPREF1039_1298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1298
AFIJ01000026.1	Genbank	CDS	46430	47701	.	-	0	ID=cds-EGL40499.1;Parent=gene-HMPREF1039_1298;Dbxref=NCBI_GP:EGL40499.1;Name=EGL40499.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_1298;product=putative DNA polymerase III%2C subunit gamma and tau;protein_id=EGL40499.1;transl_table=11
AFIJ01000026.1	Genbank	gene	47665	48126	.	-	.	ID=gene-HMPREF1039_1299;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=HMPREF1039_1299
AFIJ01000026.1	Genbank	CDS	47665	48126	.	-	0	ID=cds-EGL40497.1;Parent=gene-HMPREF1039_1299;Dbxref=NCBI_GP:EGL40497.1;Name=EGL40497.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;gene=dnaX;locus_tag=HMPREF1039_1299;product=DNA polymerase III%2C gamma and tau subunit;protein_id=EGL40497.1;transl_table=11
AFIJ01000026.1	Genbank	gene	48199	48301	.	-	.	ID=gene-HMPREF1039_1300;Name=srpB;gbkey=Gene;gene=srpB;gene_biotype=SRP_RNA;locus_tag=HMPREF1039_1300
AFIJ01000026.1	Genbank	SRP_RNA	48199	48301	.	-	.	ID=rna-HMPREF1039_1300;Parent=gene-HMPREF1039_1300;gbkey=ncRNA;gene=srpB;locus_tag=HMPREF1039_1300;product=Bacterial signal recognition particle RNA
AFIJ01000026.1	Genbank	exon	48199	48301	.	-	.	ID=exon-HMPREF1039_1300-1;Parent=rna-HMPREF1039_1300;gbkey=ncRNA;gene=srpB;locus_tag=HMPREF1039_1300;product=Bacterial signal recognition particle RNA
AFIJ01000026.1	Genbank	gene	48448	49767	.	-	.	ID=gene-HMPREF1039_1301;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=HMPREF1039_1301
AFIJ01000026.1	Genbank	CDS	48448	49767	.	-	0	ID=cds-EGL40504.1;Parent=gene-HMPREF1039_1301;Dbxref=NCBI_GP:EGL40504.1;Name=EGL40504.1;gbkey=CDS;gene=stp;locus_tag=HMPREF1039_1301;product=serine transporter;protein_id=EGL40504.1;transl_table=11
AFIJ01000026.1	Genbank	gene	49983	50184	.	-	.	ID=gene-HMPREF1039_1302;Name=HMPREF1039_1302;end_range=50184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1302;partial=true
AFIJ01000026.1	Genbank	CDS	49983	50184	.	-	1	ID=cds-EGL40475.1;Parent=gene-HMPREF1039_1302;Dbxref=NCBI_GP:EGL40475.1;Name=EGL40475.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=50184,.;gbkey=CDS;locus_tag=HMPREF1039_1302;partial=true;product=hypothetical protein;protein_id=EGL40475.1;transl_table=11
##sequence-region AFIJ01000025.1 1 12101
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000025.1	Genbank	region	1	12101	.	+	.	ID=AFIJ01000025.1:1..12101;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000025.1	Genbank	gene	1	12092	.	-	.	ID=gene-HMPREF1039_1560;Name=HMPREF1039_1560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1560;partial=true;start_range=.,1
AFIJ01000025.1	Genbank	CDS	1	12092	.	-	0	ID=cds-EGL40554.1;Parent=gene-HMPREF1039_1560;Dbxref=NCBI_GP:EGL40554.1;Name=EGL40554.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1560;partial=true;product=Hep/Hag repeat protein;protein_id=EGL40554.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000024.1 1 715
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000024.1	Genbank	region	1	715	.	+	.	ID=AFIJ01000024.1:1..715;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000024.1	Genbank	gene	1	715	.	-	.	ID=gene-HMPREF1039_1634;Name=HMPREF1039_1634;end_range=715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1634;partial=true;start_range=.,1
AFIJ01000024.1	Genbank	CDS	1	715	.	-	0	ID=cds-EGL40573.1;Parent=gene-HMPREF1039_1634;Dbxref=NCBI_GP:EGL40573.1;Name=EGL40573.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=715,.;gbkey=CDS;locus_tag=HMPREF1039_1634;partial=true;product=hypothetical protein;protein_id=EGL40573.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000023.1 1 71554
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000023.1	Genbank	region	1	71554	.	+	.	ID=AFIJ01000023.1:1..71554;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000023.1	Genbank	gene	272	808	.	+	.	ID=gene-HMPREF1039_1127;Name=HMPREF1039_1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1127
AFIJ01000023.1	Genbank	CDS	272	808	.	+	0	ID=cds-EGL40690.1;Parent=gene-HMPREF1039_1127;Dbxref=NCBI_GP:EGL40690.1;Name=EGL40690.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915;gbkey=CDS;locus_tag=HMPREF1039_1127;product=rubredoxin;protein_id=EGL40690.1;transl_table=11
AFIJ01000023.1	Genbank	gene	1090	2010	.	+	.	ID=gene-HMPREF1039_1128;Name=HMPREF1039_1128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1128
AFIJ01000023.1	Genbank	CDS	1090	2010	.	+	0	ID=cds-EGL40661.1;Parent=gene-HMPREF1039_1128;Dbxref=NCBI_GP:EGL40661.1;Name=EGL40661.1;gbkey=CDS;locus_tag=HMPREF1039_1128;product=hypothetical protein;protein_id=EGL40661.1;transl_table=11
AFIJ01000023.1	Genbank	gene	1994	2788	.	+	.	ID=gene-HMPREF1039_1129;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1129
AFIJ01000023.1	Genbank	CDS	1994	2788	.	+	0	ID=cds-EGL40715.1;Parent=gene-HMPREF1039_1129;Dbxref=NCBI_GP:EGL40715.1;Name=EGL40715.1;Note=identified by match to protein family HMM PF02548%3B match to protein family HMM TIGR00222;gbkey=CDS;gene=panB;locus_tag=HMPREF1039_1129;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=EGL40715.1;transl_table=11
AFIJ01000023.1	Genbank	gene	3033	4253	.	+	.	ID=gene-HMPREF1039_1130;Name=HMPREF1039_1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1130
AFIJ01000023.1	Genbank	CDS	3033	4253	.	+	0	ID=cds-EGL40703.1;Parent=gene-HMPREF1039_1130;Dbxref=NCBI_GP:EGL40703.1;Name=EGL40703.1;gbkey=CDS;locus_tag=HMPREF1039_1130;product=hypothetical protein;protein_id=EGL40703.1;transl_table=11
AFIJ01000023.1	Genbank	gene	4230	4364	.	-	.	ID=gene-HMPREF1039_1131;Name=HMPREF1039_1131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1131
AFIJ01000023.1	Genbank	CDS	4230	4364	.	-	0	ID=cds-EGL40680.1;Parent=gene-HMPREF1039_1131;Dbxref=NCBI_GP:EGL40680.1;Name=EGL40680.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1131;product=hypothetical protein;protein_id=EGL40680.1;transl_table=11
AFIJ01000023.1	Genbank	gene	4357	5322	.	-	.	ID=gene-HMPREF1039_1132;Name=HMPREF1039_1132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1132
AFIJ01000023.1	Genbank	CDS	4357	5322	.	-	0	ID=cds-EGL40709.1;Parent=gene-HMPREF1039_1132;Dbxref=NCBI_GP:EGL40709.1;Name=EGL40709.1;Note=identified by match to protein family HMM PF00768;gbkey=CDS;locus_tag=HMPREF1039_1132;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=EGL40709.1;transl_table=11
AFIJ01000023.1	Genbank	gene	5426	5929	.	-	.	ID=gene-HMPREF1039_1133;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1133
AFIJ01000023.1	Genbank	CDS	5426	5929	.	-	0	ID=cds-EGL40671.1;Parent=gene-HMPREF1039_1133;Dbxref=NCBI_GP:EGL40671.1;Name=EGL40671.1;Note=identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;locus_tag=HMPREF1039_1133;product=shikimate kinase;protein_id=EGL40671.1;transl_table=11
AFIJ01000023.1	Genbank	gene	5916	6737	.	-	.	ID=gene-HMPREF1039_1134;Name=HMPREF1039_1134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1134
AFIJ01000023.1	Genbank	CDS	5916	6737	.	-	0	ID=cds-EGL40697.1;Parent=gene-HMPREF1039_1134;Dbxref=NCBI_GP:EGL40697.1;Name=EGL40697.1;Note=identified by match to protein family HMM PF01488%3B match to protein family HMM PF08501;gbkey=CDS;locus_tag=HMPREF1039_1134;product=putative shikimate dehydrogenase;protein_id=EGL40697.1;transl_table=11
AFIJ01000023.1	Genbank	gene	6700	7557	.	-	.	ID=gene-HMPREF1039_1135;Name=HMPREF1039_1135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1135
AFIJ01000023.1	Genbank	CDS	6700	7557	.	-	0	ID=cds-EGL40717.1;Parent=gene-HMPREF1039_1135;Dbxref=NCBI_GP:EGL40717.1;Name=EGL40717.1;Note=identified by match to protein family HMM PF00800%3B match to protein family HMM PF01842;gbkey=CDS;locus_tag=HMPREF1039_1135;product=prephenate dehydratase;protein_id=EGL40717.1;transl_table=11
AFIJ01000023.1	Genbank	gene	7560	8654	.	-	.	ID=gene-HMPREF1039_1136;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1136
AFIJ01000023.1	Genbank	CDS	7560	8654	.	-	0	ID=cds-EGL40685.1;Parent=gene-HMPREF1039_1136;Dbxref=NCBI_GP:EGL40685.1;Name=EGL40685.1;Note=identified by match to protein family HMM PF01264%3B match to protein family HMM TIGR00033;gbkey=CDS;gene=aroC;locus_tag=HMPREF1039_1136;product=chorismate synthase;protein_id=EGL40685.1;transl_table=11
AFIJ01000023.1	Genbank	gene	8656	9930	.	-	.	ID=gene-HMPREF1039_1137;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1137
AFIJ01000023.1	Genbank	CDS	8656	9930	.	-	0	ID=cds-EGL40693.1;Parent=gene-HMPREF1039_1137;Dbxref=NCBI_GP:EGL40693.1;Name=EGL40693.1;Note=identified by match to protein family HMM PF00275%3B match to protein family HMM TIGR01356;gbkey=CDS;gene=aroA;locus_tag=HMPREF1039_1137;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=EGL40693.1;transl_table=11
AFIJ01000023.1	Genbank	gene	9944	11005	.	-	.	ID=gene-HMPREF1039_1138;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1138
AFIJ01000023.1	Genbank	CDS	9944	11005	.	-	0	ID=cds-EGL40666.1;Parent=gene-HMPREF1039_1138;Dbxref=NCBI_GP:EGL40666.1;Name=EGL40666.1;Note=identified by match to protein family HMM PF01761%3B match to protein family HMM TIGR01357;gbkey=CDS;gene=aroB;locus_tag=HMPREF1039_1138;product=3-dehydroquinate synthase;protein_id=EGL40666.1;transl_table=11
AFIJ01000023.1	Genbank	gene	10992	11870	.	-	.	ID=gene-HMPREF1039_1139;Name=HMPREF1039_1139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1139
AFIJ01000023.1	Genbank	CDS	10992	11870	.	-	0	ID=cds-EGL40698.1;Parent=gene-HMPREF1039_1139;Dbxref=NCBI_GP:EGL40698.1;Name=EGL40698.1;Note=identified by match to protein family HMM PF02153;gbkey=CDS;locus_tag=HMPREF1039_1139;product=prephenate dehydrogenase;protein_id=EGL40698.1;transl_table=11
AFIJ01000023.1	Genbank	gene	11880	12899	.	-	.	ID=gene-HMPREF1039_1140;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1140
AFIJ01000023.1	Genbank	CDS	11880	12899	.	-	0	ID=cds-EGL40710.1;Parent=gene-HMPREF1039_1140;Dbxref=NCBI_GP:EGL40710.1;Name=EGL40710.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01361;gbkey=CDS;gene=aroF;locus_tag=HMPREF1039_1140;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=EGL40710.1;transl_table=11
AFIJ01000023.1	Genbank	gene	13242	14171	.	-	.	ID=gene-HMPREF1039_1141;Name=HMPREF1039_1141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1141
AFIJ01000023.1	Genbank	CDS	13242	14171	.	-	0	ID=cds-EGL40676.1;Parent=gene-HMPREF1039_1141;Dbxref=NCBI_GP:EGL40676.1;Name=EGL40676.1;Note=identified by match to protein family HMM PF01522;gbkey=CDS;locus_tag=HMPREF1039_1141;product=polysaccharide deacetylase;protein_id=EGL40676.1;transl_table=11
AFIJ01000023.1	Genbank	gene	14174	14959	.	-	.	ID=gene-HMPREF1039_1142;Name=HMPREF1039_1142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1142
AFIJ01000023.1	Genbank	CDS	14174	14959	.	-	0	ID=cds-EGL40705.1;Parent=gene-HMPREF1039_1142;Dbxref=NCBI_GP:EGL40705.1;Name=EGL40705.1;gbkey=CDS;locus_tag=HMPREF1039_1142;product=putative selenium-dependent hydroxylase accessory protein YqeC;protein_id=EGL40705.1;transl_table=11
AFIJ01000023.1	Genbank	gene	14986	15504	.	-	.	ID=gene-HMPREF1039_1143;Name=HMPREF1039_1143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1143
AFIJ01000023.1	Genbank	CDS	14986	15504	.	-	0	ID=cds-EGL40682.1;Parent=gene-HMPREF1039_1143;Dbxref=NCBI_GP:EGL40682.1;Name=EGL40682.1;gbkey=CDS;locus_tag=HMPREF1039_1143;product=hypothetical protein;protein_id=EGL40682.1;transl_table=11
AFIJ01000023.1	Genbank	gene	15501	15737	.	-	.	ID=gene-HMPREF1039_1144;Name=HMPREF1039_1144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1144
AFIJ01000023.1	Genbank	CDS	15501	15737	.	-	0	ID=cds-EGL40687.1;Parent=gene-HMPREF1039_1144;Dbxref=NCBI_GP:EGL40687.1;Name=EGL40687.1;gbkey=CDS;locus_tag=HMPREF1039_1144;product=hypothetical protein;protein_id=EGL40687.1;transl_table=11
AFIJ01000023.1	Genbank	gene	15763	16455	.	-	.	ID=gene-HMPREF1039_1145;Name=HMPREF1039_1145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1145
AFIJ01000023.1	Genbank	CDS	15763	16455	.	-	0	ID=cds-EGL40688.1;Parent=gene-HMPREF1039_1145;Dbxref=NCBI_GP:EGL40688.1;Name=EGL40688.1;gbkey=CDS;locus_tag=HMPREF1039_1145;product=hypothetical protein;protein_id=EGL40688.1;transl_table=11
AFIJ01000023.1	Genbank	gene	16576	16950	.	-	.	ID=gene-HMPREF1039_1146;Name=HMPREF1039_1146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1146
AFIJ01000023.1	Genbank	CDS	16576	16950	.	-	0	ID=cds-EGL40667.1;Parent=gene-HMPREF1039_1146;Dbxref=NCBI_GP:EGL40667.1;Name=EGL40667.1;Note=identified by match to protein family HMM PF02537;gbkey=CDS;locus_tag=HMPREF1039_1146;product=putative protein CrcB;protein_id=EGL40667.1;transl_table=11
AFIJ01000023.1	Genbank	gene	17166	17387	.	+	.	ID=gene-HMPREF1039_1147;Name=HMPREF1039_1147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1147
AFIJ01000023.1	Genbank	CDS	17166	17387	.	+	0	ID=cds-EGL40668.1;Parent=gene-HMPREF1039_1147;Dbxref=NCBI_GP:EGL40668.1;Name=EGL40668.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1147;product=hypothetical protein;protein_id=EGL40668.1;transl_table=11
AFIJ01000023.1	Genbank	gene	17446	18330	.	-	.	ID=gene-HMPREF1039_1148;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1148
AFIJ01000023.1	Genbank	CDS	17446	18330	.	-	0	ID=cds-EGL40699.1;Parent=gene-HMPREF1039_1148;Dbxref=NCBI_GP:EGL40699.1;Name=EGL40699.1;Note=identified by match to protein family HMM PF03313%3B match to protein family HMM TIGR00718;gbkey=CDS;gene=sdaAA;locus_tag=HMPREF1039_1148;product=L-serine dehydratase%2C iron-sulfur-dependent%2C alpha subunit;protein_id=EGL40699.1;transl_table=11
AFIJ01000023.1	Genbank	gene	18341	19000	.	-	.	ID=gene-HMPREF1039_1149;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1149
AFIJ01000023.1	Genbank	CDS	18341	19000	.	-	0	ID=cds-EGL40663.1;Parent=gene-HMPREF1039_1149;Dbxref=NCBI_GP:EGL40663.1;Name=EGL40663.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF03315%3B match to protein family HMM TIGR00719;gbkey=CDS;gene=sdaAB;locus_tag=HMPREF1039_1149;product=L-serine dehydratase%2C iron-sulfur-dependent%2C beta subunit;protein_id=EGL40663.1;transl_table=11
AFIJ01000023.1	Genbank	gene	19022	22675	.	-	.	ID=gene-HMPREF1039_1150;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1150
AFIJ01000023.1	Genbank	CDS	19022	22675	.	-	0	ID=cds-EGL40702.1;Parent=gene-HMPREF1039_1150;Dbxref=NCBI_GP:EGL40702.1;Name=EGL40702.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR02785;gbkey=CDS;gene=addA;locus_tag=HMPREF1039_1150;product=ATP-dependent nuclease subunit A;protein_id=EGL40702.1;transl_table=11
AFIJ01000023.1	Genbank	gene	22662	26036	.	-	.	ID=gene-HMPREF1039_1151;Name=HMPREF1039_1151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1151
AFIJ01000023.1	Genbank	CDS	22662	26036	.	-	0	ID=cds-EGL40718.1;Parent=gene-HMPREF1039_1151;Dbxref=NCBI_GP:EGL40718.1;Name=EGL40718.1;gbkey=CDS;locus_tag=HMPREF1039_1151;product=putative ATP-dependent nuclease subunit B;protein_id=EGL40718.1;transl_table=11
AFIJ01000023.1	Genbank	gene	26027	26146	.	-	.	ID=gene-HMPREF1039_1152;Name=HMPREF1039_1152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1152
AFIJ01000023.1	Genbank	CDS	26027	26146	.	-	0	ID=cds-EGL40711.1;Parent=gene-HMPREF1039_1152;Dbxref=NCBI_GP:EGL40711.1;Name=EGL40711.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1152;product=hypothetical protein;protein_id=EGL40711.1;transl_table=11
AFIJ01000023.1	Genbank	gene	26204	27247	.	-	.	ID=gene-HMPREF1039_1153;Name=HMPREF1039_1153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1153
AFIJ01000023.1	Genbank	CDS	26204	27247	.	-	0	ID=cds-EGL40669.1;Parent=gene-HMPREF1039_1153;Dbxref=NCBI_GP:EGL40669.1;Name=EGL40669.1;Note=identified by match to protein family HMM PF03747;gbkey=CDS;locus_tag=HMPREF1039_1153;product=ADP-ribosylglycohydrolase;protein_id=EGL40669.1;transl_table=11
AFIJ01000023.1	Genbank	gene	27273	28217	.	-	.	ID=gene-HMPREF1039_1154;Name=HMPREF1039_1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1154
AFIJ01000023.1	Genbank	CDS	27273	28217	.	-	0	ID=cds-EGL40689.1;Parent=gene-HMPREF1039_1154;Dbxref=NCBI_GP:EGL40689.1;Name=EGL40689.1;Note=identified by match to protein family HMM PF01545%3B match to protein family HMM TIGR01297;gbkey=CDS;locus_tag=HMPREF1039_1154;product=cation diffusion facilitator family transporter;protein_id=EGL40689.1;transl_table=11
AFIJ01000023.1	Genbank	gene	28297	28434	.	+	.	ID=gene-HMPREF1039_1155;Name=HMPREF1039_1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1155
AFIJ01000023.1	Genbank	CDS	28297	28434	.	+	0	ID=cds-EGL40707.1;Parent=gene-HMPREF1039_1155;Dbxref=NCBI_GP:EGL40707.1;Name=EGL40707.1;gbkey=CDS;locus_tag=HMPREF1039_1155;product=hypothetical protein;protein_id=EGL40707.1;transl_table=11
AFIJ01000023.1	Genbank	gene	28580	29467	.	+	.	ID=gene-HMPREF1039_1156;Name=HMPREF1039_1156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1156
AFIJ01000023.1	Genbank	CDS	28580	29467	.	+	0	ID=cds-EGL40681.1;Parent=gene-HMPREF1039_1156;Dbxref=NCBI_GP:EGL40681.1;Name=EGL40681.1;Note=identified by match to protein family HMM PF00924;gbkey=CDS;locus_tag=HMPREF1039_1156;product=transporter%2C small conductance mechanosensitive ion channel MscS family protein;protein_id=EGL40681.1;transl_table=11
AFIJ01000023.1	Genbank	gene	29527	30864	.	-	.	ID=gene-HMPREF1039_1157;Name=HMPREF1039_1157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1157
AFIJ01000023.1	Genbank	CDS	29527	30864	.	-	0	ID=cds-EGL40708.1;Parent=gene-HMPREF1039_1157;Dbxref=NCBI_GP:EGL40708.1;Name=EGL40708.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF1039_1157;product=Acetyl-CoA hydrolase/transferase;protein_id=EGL40708.1;transl_table=11
AFIJ01000023.1	Genbank	gene	30869	31486	.	-	.	ID=gene-HMPREF1039_1158;Name=HMPREF1039_1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1158
AFIJ01000023.1	Genbank	CDS	30869	31486	.	-	0	ID=cds-EGL40679.1;Parent=gene-HMPREF1039_1158;Dbxref=NCBI_GP:EGL40679.1;Name=EGL40679.1;Note=identified by match to protein family HMM PF01558;gbkey=CDS;locus_tag=HMPREF1039_1158;product=indolepyruvate oxidoreductase subunit beta;protein_id=EGL40679.1;transl_table=11
AFIJ01000023.1	Genbank	gene	31487	33268	.	-	.	ID=gene-HMPREF1039_1159;Name=iorA;gbkey=Gene;gene=iorA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1159
AFIJ01000023.1	Genbank	CDS	31487	33268	.	-	0	ID=cds-EGL40695.1;Parent=gene-HMPREF1039_1159;Dbxref=NCBI_GP:EGL40695.1;Name=EGL40695.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01855%3B match to protein family HMM PF02775%3B match to protein family HMM TIGR03336;gbkey=CDS;gene=iorA;locus_tag=HMPREF1039_1159;product=indolepyruvate ferredoxin oxidoreductase%2C alpha subunit;protein_id=EGL40695.1;transl_table=11
AFIJ01000023.1	Genbank	gene	33470	35335	.	+	.	ID=gene-HMPREF1039_1160;Name=HMPREF1039_1160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1160
AFIJ01000023.1	Genbank	CDS	33470	35335	.	+	0	ID=cds-EGL40660.1;Parent=gene-HMPREF1039_1160;Dbxref=NCBI_GP:EGL40660.1;Name=EGL40660.1;Note=identified by match to protein family HMM PF00158;gbkey=CDS;locus_tag=HMPREF1039_1160;product=Sigma-54 interaction domain protein;protein_id=EGL40660.1;transl_table=11
AFIJ01000023.1	Genbank	gene	35413	40149	.	-	.	ID=gene-HMPREF1039_1161;Name=HMPREF1039_1161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1161
AFIJ01000023.1	Genbank	CDS	35413	40149	.	-	0	ID=cds-EGL40706.1;Parent=gene-HMPREF1039_1161;Dbxref=NCBI_GP:EGL40706.1;Name=EGL40706.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;locus_tag=HMPREF1039_1161;product=TonB-dependent receptor plug domain protein;protein_id=EGL40706.1;transl_table=11
AFIJ01000023.1	Genbank	gene	40436	41749	.	-	.	ID=gene-HMPREF1039_1162;Name=stp;gbkey=Gene;gene=stp;gene_biotype=protein_coding;locus_tag=HMPREF1039_1162
AFIJ01000023.1	Genbank	CDS	40436	41749	.	-	0	ID=cds-EGL40716.1;Parent=gene-HMPREF1039_1162;Dbxref=NCBI_GP:EGL40716.1;Name=EGL40716.1;gbkey=CDS;gene=stp;locus_tag=HMPREF1039_1162;product=serine transporter;protein_id=EGL40716.1;transl_table=11
AFIJ01000023.1	Genbank	gene	41791	41940	.	-	.	ID=gene-HMPREF1039_1163;Name=HMPREF1039_1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1163
AFIJ01000023.1	Genbank	CDS	41791	41940	.	-	0	ID=cds-EGL40692.1;Parent=gene-HMPREF1039_1163;Dbxref=NCBI_GP:EGL40692.1;Name=EGL40692.1;gbkey=CDS;locus_tag=HMPREF1039_1163;product=hypothetical protein;protein_id=EGL40692.1;transl_table=11
AFIJ01000023.1	Genbank	gene	41918	43105	.	-	.	ID=gene-HMPREF1039_1164;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF1039_1164
AFIJ01000023.1	Genbank	CDS	41918	43105	.	-	0	ID=cds-EGL40714.1;Parent=gene-HMPREF1039_1164;Dbxref=NCBI_GP:EGL40714.1;Name=EGL40714.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03143%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00485;gbkey=CDS;gene=tuf;locus_tag=HMPREF1039_1164;product=translation elongation factor Tu;protein_id=EGL40714.1;transl_table=11
AFIJ01000023.1	Genbank	gene	43239	43315	.	-	.	ID=gene-HMPREF1039_1165;Name=HMPREF1039_1165;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1165
AFIJ01000023.1	Genbank	tRNA	43239	43315	.	-	.	ID=rna-HMPREF1039_1165;Parent=gene-HMPREF1039_1165;gbkey=tRNA;locus_tag=HMPREF1039_1165;product=tRNA-Met
AFIJ01000023.1	Genbank	exon	43239	43315	.	-	.	ID=exon-HMPREF1039_1165-1;Parent=rna-HMPREF1039_1165;gbkey=tRNA;locus_tag=HMPREF1039_1165;product=tRNA-Met
AFIJ01000023.1	Genbank	gene	43321	43396	.	-	.	ID=gene-HMPREF1039_1166;Name=HMPREF1039_1166;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1166
AFIJ01000023.1	Genbank	tRNA	43321	43396	.	-	.	ID=rna-HMPREF1039_1166;Parent=gene-HMPREF1039_1166;gbkey=tRNA;locus_tag=HMPREF1039_1166;product=tRNA-Thr
AFIJ01000023.1	Genbank	exon	43321	43396	.	-	.	ID=exon-HMPREF1039_1166-1;Parent=rna-HMPREF1039_1166;gbkey=tRNA;locus_tag=HMPREF1039_1166;product=tRNA-Thr
AFIJ01000023.1	Genbank	gene	43462	43537	.	-	.	ID=gene-HMPREF1039_1167;Name=HMPREF1039_1167;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1167
AFIJ01000023.1	Genbank	tRNA	43462	43537	.	-	.	ID=rna-HMPREF1039_1167;Parent=gene-HMPREF1039_1167;gbkey=tRNA;locus_tag=HMPREF1039_1167;product=tRNA-Met
AFIJ01000023.1	Genbank	exon	43462	43537	.	-	.	ID=exon-HMPREF1039_1167-1;Parent=rna-HMPREF1039_1167;gbkey=tRNA;locus_tag=HMPREF1039_1167;product=tRNA-Met
AFIJ01000023.1	Genbank	gene	43542	43627	.	-	.	ID=gene-HMPREF1039_1168;Name=HMPREF1039_1168;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1168
AFIJ01000023.1	Genbank	tRNA	43542	43627	.	-	.	ID=rna-HMPREF1039_1168;Parent=gene-HMPREF1039_1168;gbkey=tRNA;locus_tag=HMPREF1039_1168;product=tRNA-Tyr
AFIJ01000023.1	Genbank	exon	43542	43627	.	-	.	ID=exon-HMPREF1039_1168-1;Parent=rna-HMPREF1039_1168;gbkey=tRNA;locus_tag=HMPREF1039_1168;product=tRNA-Tyr
AFIJ01000023.1	Genbank	gene	43635	43710	.	-	.	ID=gene-HMPREF1039_1169;Name=HMPREF1039_1169;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1169
AFIJ01000023.1	Genbank	tRNA	43635	43710	.	-	.	ID=rna-HMPREF1039_1169;Parent=gene-HMPREF1039_1169;gbkey=tRNA;locus_tag=HMPREF1039_1169;product=tRNA-Thr
AFIJ01000023.1	Genbank	exon	43635	43710	.	-	.	ID=exon-HMPREF1039_1169-1;Parent=rna-HMPREF1039_1169;gbkey=tRNA;locus_tag=HMPREF1039_1169;product=tRNA-Thr
AFIJ01000023.1	Genbank	gene	43836	44021	.	+	.	ID=gene-HMPREF1039_1170;Name=HMPREF1039_1170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1170
AFIJ01000023.1	Genbank	CDS	43836	44021	.	+	0	ID=cds-EGL40662.1;Parent=gene-HMPREF1039_1170;Dbxref=NCBI_GP:EGL40662.1;Name=EGL40662.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1170;product=hypothetical protein;protein_id=EGL40662.1;transl_table=11
AFIJ01000023.1	Genbank	gene	44044	47478	.	+	.	ID=gene-HMPREF1039_1171;Name=pyc;gbkey=Gene;gene=pyc;gene_biotype=protein_coding;locus_tag=HMPREF1039_1171
AFIJ01000023.1	Genbank	CDS	44044	47478	.	+	0	ID=cds-EGL40674.1;Parent=gene-HMPREF1039_1171;Dbxref=NCBI_GP:EGL40674.1;Name=EGL40674.1;Note=identified by match to protein family HMM PF00289%3B match to protein family HMM PF00364%3B match to protein family HMM PF00682%3B match to protein family HMM PF02222%3B match to protein family HMM PF02436%3B match to protein family HMM PF02785%3B match to protein family HMM PF02786%3B match to protein family HMM PF08443%3B match to protein family HMM TIGR01235;gbkey=CDS;gene=pyc;locus_tag=HMPREF1039_1171;product=pyruvate carboxylase;protein_id=EGL40674.1;transl_table=11
AFIJ01000023.1	Genbank	gene	47608	48444	.	+	.	ID=gene-HMPREF1039_1172;Name=HMPREF1039_1172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1172
AFIJ01000023.1	Genbank	CDS	47608	48444	.	+	0	ID=cds-EGL40675.1;Parent=gene-HMPREF1039_1172;Dbxref=NCBI_GP:EGL40675.1;Name=EGL40675.1;gbkey=CDS;locus_tag=HMPREF1039_1172;product=hypothetical protein;protein_id=EGL40675.1;transl_table=11
AFIJ01000023.1	Genbank	gene	48520	48717	.	-	.	ID=gene-HMPREF1039_1173;Name=HMPREF1039_1173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1173
AFIJ01000023.1	Genbank	CDS	48520	48717	.	-	0	ID=cds-EGL40684.1;Parent=gene-HMPREF1039_1173;Dbxref=NCBI_GP:EGL40684.1;Name=EGL40684.1;gbkey=CDS;locus_tag=HMPREF1039_1173;product=hypothetical protein;protein_id=EGL40684.1;transl_table=11
AFIJ01000023.1	Genbank	gene	48837	49850	.	+	.	ID=gene-HMPREF1039_1174;Name=HMPREF1039_1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1174
AFIJ01000023.1	Genbank	CDS	48837	49850	.	+	0	ID=cds-EGL40673.1;Parent=gene-HMPREF1039_1174;Dbxref=NCBI_GP:EGL40673.1;Name=EGL40673.1;Note=identified by match to protein family HMM PF00356%3B match to protein family HMM PF00532;gbkey=CDS;locus_tag=HMPREF1039_1174;product=transcriptional regulator%2C LacI family;protein_id=EGL40673.1;transl_table=11
AFIJ01000023.1	Genbank	gene	49953	51245	.	-	.	ID=gene-HMPREF1039_1175;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1175
AFIJ01000023.1	Genbank	CDS	49953	51245	.	-	0	ID=cds-EGL40713.1;Parent=gene-HMPREF1039_1175;Dbxref=NCBI_GP:EGL40713.1;Name=EGL40713.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00928;gbkey=CDS;gene=purB;locus_tag=HMPREF1039_1175;product=adenylosuccinate lyase;protein_id=EGL40713.1;transl_table=11
AFIJ01000023.1	Genbank	gene	51404	52486	.	-	.	ID=gene-HMPREF1039_1176;Name=HMPREF1039_1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1176
AFIJ01000023.1	Genbank	CDS	51404	52486	.	-	0	ID=cds-EGL40694.1;Parent=gene-HMPREF1039_1176;Dbxref=NCBI_GP:EGL40694.1;Name=EGL40694.1;gbkey=CDS;locus_tag=HMPREF1039_1176;product=hypothetical protein;protein_id=EGL40694.1;transl_table=11
AFIJ01000023.1	Genbank	gene	52828	54225	.	-	.	ID=gene-HMPREF1039_1177;Name=HMPREF1039_1177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1177
AFIJ01000023.1	Genbank	CDS	52828	54225	.	-	0	ID=cds-EGL40712.1;Parent=gene-HMPREF1039_1177;Dbxref=NCBI_GP:EGL40712.1;Name=EGL40712.1;Note=identified by match to protein family HMM PF00890%3B match to protein family HMM PF01266;gbkey=CDS;locus_tag=HMPREF1039_1177;product=FAD dependent oxidoreductase;protein_id=EGL40712.1;transl_table=11
AFIJ01000023.1	Genbank	gene	54366	54797	.	+	.	ID=gene-HMPREF1039_1178;Name=HMPREF1039_1178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1178
AFIJ01000023.1	Genbank	CDS	54366	54797	.	+	0	ID=cds-EGL40672.1;Parent=gene-HMPREF1039_1178;Dbxref=NCBI_GP:EGL40672.1;Name=EGL40672.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1178;product=hypothetical protein;protein_id=EGL40672.1;transl_table=11
AFIJ01000023.1	Genbank	gene	55037	55122	.	-	.	ID=gene-HMPREF1039_1179;Name=HMPREF1039_1179;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1179
AFIJ01000023.1	Genbank	tRNA	55037	55122	.	-	.	ID=rna-HMPREF1039_1179;Parent=gene-HMPREF1039_1179;gbkey=tRNA;locus_tag=HMPREF1039_1179;product=tRNA-Leu
AFIJ01000023.1	Genbank	exon	55037	55122	.	-	.	ID=exon-HMPREF1039_1179-1;Parent=rna-HMPREF1039_1179;gbkey=tRNA;locus_tag=HMPREF1039_1179;product=tRNA-Leu
AFIJ01000023.1	Genbank	gene	55136	55211	.	-	.	ID=gene-HMPREF1039_1180;Name=HMPREF1039_1180;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1180
AFIJ01000023.1	Genbank	tRNA	55136	55211	.	-	.	ID=rna-HMPREF1039_1180;Parent=gene-HMPREF1039_1180;gbkey=tRNA;locus_tag=HMPREF1039_1180;product=tRNA-Phe
AFIJ01000023.1	Genbank	exon	55136	55211	.	-	.	ID=exon-HMPREF1039_1180-1;Parent=rna-HMPREF1039_1180;gbkey=tRNA;locus_tag=HMPREF1039_1180;product=tRNA-Phe
AFIJ01000023.1	Genbank	gene	55217	55293	.	-	.	ID=gene-HMPREF1039_1181;Name=HMPREF1039_1181;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1181
AFIJ01000023.1	Genbank	tRNA	55217	55293	.	-	.	ID=rna-HMPREF1039_1181;Parent=gene-HMPREF1039_1181;gbkey=tRNA;locus_tag=HMPREF1039_1181;product=tRNA-Asp
AFIJ01000023.1	Genbank	exon	55217	55293	.	-	.	ID=exon-HMPREF1039_1181-1;Parent=rna-HMPREF1039_1181;gbkey=tRNA;locus_tag=HMPREF1039_1181;product=tRNA-Asp
AFIJ01000023.1	Genbank	gene	55494	58142	.	+	.	ID=gene-HMPREF1039_1182;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1182
AFIJ01000023.1	Genbank	CDS	55494	58142	.	+	0	ID=cds-EGL40701.1;Parent=gene-HMPREF1039_1182;Dbxref=NCBI_GP:EGL40701.1;Name=EGL40701.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524;gbkey=CDS;gene=mgtA;locus_tag=HMPREF1039_1182;product=magnesium-importing ATPase;protein_id=EGL40701.1;transl_table=11
AFIJ01000023.1	Genbank	gene	58155	58661	.	+	.	ID=gene-HMPREF1039_1183;Name=HMPREF1039_1183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1183
AFIJ01000023.1	Genbank	CDS	58155	58661	.	+	0	ID=cds-EGL40678.1;Parent=gene-HMPREF1039_1183;Dbxref=NCBI_GP:EGL40678.1;Name=EGL40678.1;Note=identified by match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF1039_1183;product=transcriptional regulatory protein%2C C-terminal domain protein;protein_id=EGL40678.1;transl_table=11
AFIJ01000023.1	Genbank	gene	58756	61503	.	+	.	ID=gene-HMPREF1039_1184;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1184
AFIJ01000023.1	Genbank	CDS	58756	61503	.	+	0	ID=cds-EGL40677.1;Parent=gene-HMPREF1039_1184;Dbxref=NCBI_GP:EGL40677.1;Name=EGL40677.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01524;gbkey=CDS;gene=mgtA;locus_tag=HMPREF1039_1184;product=magnesium-importing ATPase;protein_id=EGL40677.1;transl_table=11
AFIJ01000023.1	Genbank	gene	61696	63549	.	+	.	ID=gene-HMPREF1039_1185;Name=HMPREF1039_1185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1185
AFIJ01000023.1	Genbank	CDS	61696	63549	.	+	0	ID=cds-EGL40696.1;Parent=gene-HMPREF1039_1185;Dbxref=NCBI_GP:EGL40696.1;Name=EGL40696.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF1039_1185;product=arylsulfatase;protein_id=EGL40696.1;transl_table=11
AFIJ01000023.1	Genbank	gene	63626	64417	.	-	.	ID=gene-HMPREF1039_1186;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1186
AFIJ01000023.1	Genbank	CDS	63626	64417	.	-	0	ID=cds-EGL40670.1;Parent=gene-HMPREF1039_1186;Dbxref=NCBI_GP:EGL40670.1;Name=EGL40670.1;Note=identified by match to protein family HMM PF00290%3B match to protein family HMM TIGR00262;gbkey=CDS;gene=trpA;locus_tag=HMPREF1039_1186;product=tryptophan synthase%2C alpha subunit;protein_id=EGL40670.1;transl_table=11
AFIJ01000023.1	Genbank	gene	64410	65594	.	-	.	ID=gene-HMPREF1039_1187;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1187
AFIJ01000023.1	Genbank	CDS	64410	65594	.	-	0	ID=cds-EGL40665.1;Parent=gene-HMPREF1039_1187;Dbxref=NCBI_GP:EGL40665.1;Name=EGL40665.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00263;gbkey=CDS;gene=trpB;locus_tag=HMPREF1039_1187;product=tryptophan synthase%2C beta subunit;protein_id=EGL40665.1;transl_table=11
AFIJ01000023.1	Genbank	gene	65596	66195	.	-	.	ID=gene-HMPREF1039_1188;Name=trpF;gbkey=Gene;gene=trpF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1188
AFIJ01000023.1	Genbank	CDS	65596	66195	.	-	0	ID=cds-EGL40664.1;Parent=gene-HMPREF1039_1188;Dbxref=NCBI_GP:EGL40664.1;Name=EGL40664.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00697;gbkey=CDS;gene=trpF;locus_tag=HMPREF1039_1188;product=N-(5'phosphoribosyl)anthranilate isomerase;protein_id=EGL40664.1;transl_table=11
AFIJ01000023.1	Genbank	gene	66192	66974	.	-	.	ID=gene-HMPREF1039_1189;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1189
AFIJ01000023.1	Genbank	CDS	66192	66974	.	-	0	ID=cds-EGL40691.1;Parent=gene-HMPREF1039_1189;Dbxref=NCBI_GP:EGL40691.1;Name=EGL40691.1;Note=identified by match to protein family HMM PF00218;gbkey=CDS;gene=trpC;locus_tag=HMPREF1039_1189;product=indole-3-glycerol phosphate synthase;protein_id=EGL40691.1;transl_table=11
AFIJ01000023.1	Genbank	gene	66971	67996	.	-	.	ID=gene-HMPREF1039_1190;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1190
AFIJ01000023.1	Genbank	CDS	66971	67996	.	-	0	ID=cds-EGL40686.1;Parent=gene-HMPREF1039_1190;Dbxref=NCBI_GP:EGL40686.1;Name=EGL40686.1;Note=identified by match to protein family HMM PF00591%3B match to protein family HMM PF02885%3B match to protein family HMM TIGR01245;gbkey=CDS;gene=trpD;locus_tag=HMPREF1039_1190;product=anthranilate phosphoribosyltransferase;protein_id=EGL40686.1;transl_table=11
AFIJ01000023.1	Genbank	gene	68009	68575	.	-	.	ID=gene-HMPREF1039_1191;Name=HMPREF1039_1191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1191
AFIJ01000023.1	Genbank	CDS	68009	68575	.	-	0	ID=cds-EGL40700.1;Parent=gene-HMPREF1039_1191;Dbxref=NCBI_GP:EGL40700.1;Name=EGL40700.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;locus_tag=HMPREF1039_1191;product=glutamine amidotransferase%2C class I;protein_id=EGL40700.1;transl_table=11
AFIJ01000023.1	Genbank	gene	68556	70037	.	-	.	ID=gene-HMPREF1039_1192;Name=HMPREF1039_1192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1192
AFIJ01000023.1	Genbank	CDS	68556	70037	.	-	0	ID=cds-EGL40683.1;Parent=gene-HMPREF1039_1192;Dbxref=NCBI_GP:EGL40683.1;Name=EGL40683.1;Note=identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715;gbkey=CDS;locus_tag=HMPREF1039_1192;product=chorismate binding enzyme;protein_id=EGL40683.1;transl_table=11
AFIJ01000023.1	Genbank	sequence_feature	70079	70315	.	-	.	ID=id-AFIJ01000023.1:70079..70315;Note=T-box leader;gbkey=misc_feature
AFIJ01000023.1	Genbank	gene	70536	70611	.	-	.	ID=gene-HMPREF1039_1194;Name=HMPREF1039_1194;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1194
AFIJ01000023.1	Genbank	tRNA	70536	70611	.	-	.	ID=rna-HMPREF1039_1194;Parent=gene-HMPREF1039_1194;gbkey=tRNA;locus_tag=HMPREF1039_1194;product=tRNA-Val
AFIJ01000023.1	Genbank	exon	70536	70611	.	-	.	ID=exon-HMPREF1039_1194-1;Parent=rna-HMPREF1039_1194;gbkey=tRNA;locus_tag=HMPREF1039_1194;product=tRNA-Val
AFIJ01000023.1	Genbank	gene	70617	70692	.	-	.	ID=gene-HMPREF1039_1195;Name=HMPREF1039_1195;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1195
AFIJ01000023.1	Genbank	tRNA	70617	70692	.	-	.	ID=rna-HMPREF1039_1195;Parent=gene-HMPREF1039_1195;gbkey=tRNA;locus_tag=HMPREF1039_1195;product=tRNA-Glu
AFIJ01000023.1	Genbank	exon	70617	70692	.	-	.	ID=exon-HMPREF1039_1195-1;Parent=rna-HMPREF1039_1195;gbkey=tRNA;locus_tag=HMPREF1039_1195;product=tRNA-Glu
AFIJ01000023.1	Genbank	gene	70703	70778	.	-	.	ID=gene-HMPREF1039_1196;Name=HMPREF1039_1196;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1196
AFIJ01000023.1	Genbank	tRNA	70703	70778	.	-	.	ID=rna-HMPREF1039_1196;Parent=gene-HMPREF1039_1196;gbkey=tRNA;locus_tag=HMPREF1039_1196;product=tRNA-Lys
AFIJ01000023.1	Genbank	exon	70703	70778	.	-	.	ID=exon-HMPREF1039_1196-1;Parent=rna-HMPREF1039_1196;gbkey=tRNA;locus_tag=HMPREF1039_1196;product=tRNA-Lys
AFIJ01000023.1	Genbank	gene	70790	70863	.	-	.	ID=gene-HMPREF1039_1197;Name=HMPREF1039_1197;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1197
AFIJ01000023.1	Genbank	tRNA	70790	70863	.	-	.	ID=rna-HMPREF1039_1197;Parent=gene-HMPREF1039_1197;gbkey=tRNA;locus_tag=HMPREF1039_1197;product=tRNA-Gln
AFIJ01000023.1	Genbank	exon	70790	70863	.	-	.	ID=exon-HMPREF1039_1197-1;Parent=rna-HMPREF1039_1197;gbkey=tRNA;locus_tag=HMPREF1039_1197;product=tRNA-Gln
AFIJ01000023.1	Genbank	gene	70867	70942	.	-	.	ID=gene-HMPREF1039_1198;Name=HMPREF1039_1198;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1198
AFIJ01000023.1	Genbank	tRNA	70867	70942	.	-	.	ID=rna-HMPREF1039_1198;Parent=gene-HMPREF1039_1198;gbkey=tRNA;locus_tag=HMPREF1039_1198;product=tRNA-Asn
AFIJ01000023.1	Genbank	exon	70867	70942	.	-	.	ID=exon-HMPREF1039_1198-1;Parent=rna-HMPREF1039_1198;gbkey=tRNA;locus_tag=HMPREF1039_1198;product=tRNA-Asn
AFIJ01000023.1	Genbank	gene	70948	71022	.	-	.	ID=gene-HMPREF1039_1199;Name=HMPREF1039_1199;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1199
AFIJ01000023.1	Genbank	tRNA	70948	71022	.	-	.	ID=rna-HMPREF1039_1199;Parent=gene-HMPREF1039_1199;gbkey=tRNA;locus_tag=HMPREF1039_1199;product=tRNA-Gly
AFIJ01000023.1	Genbank	exon	70948	71022	.	-	.	ID=exon-HMPREF1039_1199-1;Parent=rna-HMPREF1039_1199;gbkey=tRNA;locus_tag=HMPREF1039_1199;product=tRNA-Gly
AFIJ01000023.1	Genbank	gene	71416	71547	.	-	.	ID=gene-HMPREF1039_1200;Name=HMPREF1039_1200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1200
AFIJ01000023.1	Genbank	CDS	71416	71547	.	-	0	ID=cds-EGL40704.1;Parent=gene-HMPREF1039_1200;Dbxref=NCBI_GP:EGL40704.1;Name=EGL40704.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1200;product=hypothetical protein;protein_id=EGL40704.1;transl_table=11
##sequence-region AFIJ01000022.1 1 1726
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000022.1	Genbank	region	1	1726	.	+	.	ID=AFIJ01000022.1:1..1726;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000022.1	Genbank	gene	1	1718	.	-	.	ID=gene-HMPREF1039_1625;Name=HMPREF1039_1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1625;partial=true;start_range=.,1
AFIJ01000022.1	Genbank	CDS	1	1718	.	-	0	ID=cds-EGL40816.1;Parent=gene-HMPREF1039_1625;Dbxref=NCBI_GP:EGL40816.1;Name=EGL40816.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_1625;partial=true;product=hypothetical protein;protein_id=EGL40816.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000021.1 1 2632
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000021.1	Genbank	region	1	2632	.	+	.	ID=AFIJ01000021.1:1..2632;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000021.1	Genbank	gene	1	1805	.	-	.	ID=gene-HMPREF1039_1617;Name=HMPREF1039_1617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1617;partial=true;start_range=.,1
AFIJ01000021.1	Genbank	CDS	1	1805	.	-	0	ID=cds-EGL40838.1;Parent=gene-HMPREF1039_1617;Dbxref=NCBI_GP:EGL40838.1;Name=EGL40838.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_1617;partial=true;product=hypothetical protein;protein_id=EGL40838.1;start_range=.,1;transl_table=11
AFIJ01000021.1	Genbank	gene	1878	2632	.	+	.	ID=gene-HMPREF1039_1618;Name=HMPREF1039_1618;end_range=2632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1618;partial=true
AFIJ01000021.1	Genbank	CDS	1878	2632	.	+	0	ID=cds-EGL40839.1;Parent=gene-HMPREF1039_1618;Dbxref=NCBI_GP:EGL40839.1;Name=EGL40839.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;end_range=2632,.;gbkey=CDS;locus_tag=HMPREF1039_1618;partial=true;product=hypothetical protein;protein_id=EGL40839.1;transl_table=11
##sequence-region AFIJ01000020.1 1 80676
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000020.1	Genbank	region	1	80676	.	+	.	ID=AFIJ01000020.1:1..80676;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000020.1	Genbank	gene	1	97	.	-	.	ID=gene-HMPREF1039_1039;Name=HMPREF1039_1039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1039;partial=true;start_range=.,1
AFIJ01000020.1	Genbank	CDS	1	97	.	-	0	ID=cds-EGL40920.1;Parent=gene-HMPREF1039_1039;Dbxref=NCBI_GP:EGL40920.1;Name=EGL40920.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1039;partial=true;product=hypothetical protein;protein_id=EGL40920.1;start_range=.,1;transl_table=11
AFIJ01000020.1	Genbank	gene	166	1482	.	-	.	ID=gene-HMPREF1039_1040;Name=HMPREF1039_1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1040
AFIJ01000020.1	Genbank	CDS	166	1482	.	-	0	ID=cds-EGL40876.1;Parent=gene-HMPREF1039_1040;Dbxref=NCBI_GP:EGL40876.1;Name=EGL40876.1;Note=identified by match to protein family HMM PF00083%3B match to protein family HMM PF07690;gbkey=CDS;locus_tag=HMPREF1039_1040;product=transporter%2C major facilitator family protein;protein_id=EGL40876.1;transl_table=11
AFIJ01000020.1	Genbank	gene	1576	2091	.	-	.	ID=gene-HMPREF1039_1041;Name=HMPREF1039_1041;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1041
AFIJ01000020.1	Genbank	CDS	1576	2091	.	-	0	ID=cds-EGL40902.1;Parent=gene-HMPREF1039_1041;Dbxref=NCBI_GP:EGL40902.1;Name=EGL40902.1;Note=identified by match to protein family HMM PF02829%3B match to protein family HMM PF08279;gbkey=CDS;locus_tag=HMPREF1039_1041;product=HTH domain protein;protein_id=EGL40902.1;transl_table=11
AFIJ01000020.1	Genbank	gene	2213	3466	.	-	.	ID=gene-HMPREF1039_1042;Name=HMPREF1039_1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1042
AFIJ01000020.1	Genbank	CDS	2213	3466	.	-	0	ID=cds-EGL40921.1;Parent=gene-HMPREF1039_1042;Dbxref=NCBI_GP:EGL40921.1;Name=EGL40921.1;Note=identified by match to protein family HMM PF00278%3B match to protein family HMM PF02784;gbkey=CDS;locus_tag=HMPREF1039_1042;product=putative diaminopimelate decarboxylase;protein_id=EGL40921.1;transl_table=11
AFIJ01000020.1	Genbank	gene	3612	4469	.	+	.	ID=gene-HMPREF1039_1043;Name=HMPREF1039_1043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1043
AFIJ01000020.1	Genbank	CDS	3612	4469	.	+	0	ID=cds-EGL40938.1;Parent=gene-HMPREF1039_1043;Dbxref=NCBI_GP:EGL40938.1;Name=EGL40938.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF1039_1043;product=transcriptional regulator%2C LysR family;protein_id=EGL40938.1;transl_table=11
AFIJ01000020.1	Genbank	gene	4578	4835	.	-	.	ID=gene-HMPREF1039_1044;Name=HMPREF1039_1044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1044
AFIJ01000020.1	Genbank	CDS	4578	4835	.	-	0	ID=cds-EGL40883.1;Parent=gene-HMPREF1039_1044;Dbxref=NCBI_GP:EGL40883.1;Name=EGL40883.1;Note=identified by match to protein family HMM PF00403;gbkey=CDS;locus_tag=HMPREF1039_1044;product=heavy metal-associated domain protein;protein_id=EGL40883.1;transl_table=11
AFIJ01000020.1	Genbank	gene	4940	5827	.	-	.	ID=gene-HMPREF1039_1045;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1045
AFIJ01000020.1	Genbank	CDS	4940	5827	.	-	0	ID=cds-EGL40887.1;Parent=gene-HMPREF1039_1045;Dbxref=NCBI_GP:EGL40887.1;Name=EGL40887.1;Note=identified by match to protein family HMM PF00701%3B match to protein family HMM TIGR00674;gbkey=CDS;gene=dapA;locus_tag=HMPREF1039_1045;product=dihydrodipicolinate synthase;protein_id=EGL40887.1;transl_table=11
AFIJ01000020.1	Genbank	gene	5848	6882	.	-	.	ID=gene-HMPREF1039_1046;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=HMPREF1039_1046
AFIJ01000020.1	Genbank	CDS	5848	6882	.	-	0	ID=cds-EGL40913.1;Parent=gene-HMPREF1039_1046;Dbxref=NCBI_GP:EGL40913.1;Name=EGL40913.1;Note=identified by match to protein family HMM PF01118%3B match to protein family HMM PF02774%3B match to protein family HMM TIGR01296;gbkey=CDS;gene=asd;locus_tag=HMPREF1039_1046;product=aspartate-semialdehyde dehydrogenase;protein_id=EGL40913.1;transl_table=11
AFIJ01000020.1	Genbank	gene	6904	7701	.	-	.	ID=gene-HMPREF1039_1047;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1047
AFIJ01000020.1	Genbank	CDS	6904	7701	.	-	0	ID=cds-EGL40886.1;Parent=gene-HMPREF1039_1047;Dbxref=NCBI_GP:EGL40886.1;Name=EGL40886.1;Note=identified by match to protein family HMM PF01113%3B match to protein family HMM PF03447%3B match to protein family HMM PF05173%3B match to protein family HMM TIGR00036;gbkey=CDS;gene=dapB;locus_tag=HMPREF1039_1047;product=dihydrodipicolinate reductase;protein_id=EGL40886.1;transl_table=11
AFIJ01000020.1	Genbank	gene	7768	9474	.	-	.	ID=gene-HMPREF1039_1048;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=HMPREF1039_1048
AFIJ01000020.1	Genbank	CDS	7768	9474	.	-	0	ID=cds-EGL40919.1;Parent=gene-HMPREF1039_1048;Dbxref=NCBI_GP:EGL40919.1;Name=EGL40919.1;Note=identified by match to protein family HMM PF02463%3B match to protein family HMM TIGR00634;gbkey=CDS;gene=recN;locus_tag=HMPREF1039_1048;product=DNA repair protein RecN;protein_id=EGL40919.1;transl_table=11
AFIJ01000020.1	Genbank	gene	9482	9937	.	-	.	ID=gene-HMPREF1039_1049;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=HMPREF1039_1049
AFIJ01000020.1	Genbank	CDS	9482	9937	.	-	0	ID=cds-EGL40895.1;Parent=gene-HMPREF1039_1049;Dbxref=NCBI_GP:EGL40895.1;Name=EGL40895.1;Note=identified by match to protein family HMM PF01316%3B match to protein family HMM PF02863%3B match to protein family HMM TIGR01529;gbkey=CDS;gene=argR;locus_tag=HMPREF1039_1049;product=arginine repressor;protein_id=EGL40895.1;transl_table=11
AFIJ01000020.1	Genbank	gene	9977	10549	.	-	.	ID=gene-HMPREF1039_1050;Name=HMPREF1039_1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1050
AFIJ01000020.1	Genbank	CDS	9977	10549	.	-	0	ID=cds-EGL40941.1;Parent=gene-HMPREF1039_1050;Dbxref=NCBI_GP:EGL40941.1;Name=EGL40941.1;Note=identified by match to protein family HMM PF06962;gbkey=CDS;locus_tag=HMPREF1039_1050;product=putative rRNA methylase;protein_id=EGL40941.1;transl_table=11
AFIJ01000020.1	Genbank	gene	10551	11423	.	-	.	ID=gene-HMPREF1039_1051;Name=HMPREF1039_1051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1051
AFIJ01000020.1	Genbank	CDS	10551	11423	.	-	0	ID=cds-EGL40875.1;Parent=gene-HMPREF1039_1051;Dbxref=NCBI_GP:EGL40875.1;Name=EGL40875.1;Note=identified by match to protein family HMM PF01513;gbkey=CDS;locus_tag=HMPREF1039_1051;product=NAD(+)/NADH kinase;protein_id=EGL40875.1;transl_table=11
AFIJ01000020.1	Genbank	gene	11435	12232	.	-	.	ID=gene-HMPREF1039_1052;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_1052
AFIJ01000020.1	Genbank	CDS	11435	12232	.	-	0	ID=cds-EGL40953.1;Parent=gene-HMPREF1039_1052;Dbxref=NCBI_GP:EGL40953.1;Name=EGL40953.1;Note=identified by match to protein family HMM PF01479%3B match to protein family HMM PF01728%3B match to protein family HMM TIGR00478;gbkey=CDS;gene=rrmJ;locus_tag=HMPREF1039_1052;product=ribosomal RNA large subunit methyltransferase J;protein_id=EGL40953.1;transl_table=11
AFIJ01000020.1	Genbank	gene	12249	13136	.	-	.	ID=gene-HMPREF1039_1053;Name=HMPREF1039_1053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1053
AFIJ01000020.1	Genbank	CDS	12249	13136	.	-	0	ID=cds-EGL40945.1;Parent=gene-HMPREF1039_1053;Dbxref=NCBI_GP:EGL40945.1;Name=EGL40945.1;Note=identified by match to protein family HMM PF00348;gbkey=CDS;locus_tag=HMPREF1039_1053;product=polyprenyl synthetase;protein_id=EGL40945.1;transl_table=11
AFIJ01000020.1	Genbank	gene	13123	13371	.	-	.	ID=gene-HMPREF1039_1054;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1054
AFIJ01000020.1	Genbank	CDS	13123	13371	.	-	0	ID=cds-EGL40947.1;Parent=gene-HMPREF1039_1054;Dbxref=NCBI_GP:EGL40947.1;Name=EGL40947.1;Note=identified by match to protein family HMM PF02609;gbkey=CDS;gene=xseB;locus_tag=HMPREF1039_1054;product=exodeoxyribonuclease VII%2C small subunit;protein_id=EGL40947.1;transl_table=11
AFIJ01000020.1	Genbank	gene	13358	14563	.	-	.	ID=gene-HMPREF1039_1055;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1055
AFIJ01000020.1	Genbank	CDS	13358	14563	.	-	0	ID=cds-EGL40948.1;Parent=gene-HMPREF1039_1055;Dbxref=NCBI_GP:EGL40948.1;Name=EGL40948.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02601%3B match to protein family HMM TIGR00237;gbkey=CDS;gene=xseA;locus_tag=HMPREF1039_1055;product=exodeoxyribonuclease VII%2C large subunit;protein_id=EGL40948.1;transl_table=11
AFIJ01000020.1	Genbank	gene	14565	15512	.	-	.	ID=gene-HMPREF1039_1056;Name=HMPREF1039_1056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1056
AFIJ01000020.1	Genbank	CDS	14565	15512	.	-	0	ID=cds-EGL40909.1;Parent=gene-HMPREF1039_1056;Dbxref=NCBI_GP:EGL40909.1;Name=EGL40909.1;Note=identified by match to protein family HMM PF00814;gbkey=CDS;locus_tag=HMPREF1039_1056;product=metallohydrolase%2C glycoprotease/Kae1 family;protein_id=EGL40909.1;transl_table=11
AFIJ01000020.1	Genbank	gene	15509	15934	.	-	.	ID=gene-HMPREF1039_1057;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1057
AFIJ01000020.1	Genbank	CDS	15509	15934	.	-	0	ID=cds-EGL40930.1;Parent=gene-HMPREF1039_1057;Dbxref=NCBI_GP:EGL40930.1;Name=EGL40930.1;Note=identified by match to protein family HMM PF01029%3B match to protein family HMM TIGR01951;gbkey=CDS;gene=nusB;locus_tag=HMPREF1039_1057;product=transcription antitermination factor NusB;protein_id=EGL40930.1;transl_table=11
AFIJ01000020.1	Genbank	gene	15944	16249	.	-	.	ID=gene-HMPREF1039_1058;Name=HMPREF1039_1058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1058
AFIJ01000020.1	Genbank	CDS	15944	16249	.	-	0	ID=cds-EGL40882.1;Parent=gene-HMPREF1039_1058;Dbxref=NCBI_GP:EGL40882.1;Name=EGL40882.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1058;product=hypothetical protein;protein_id=EGL40882.1;transl_table=11
AFIJ01000020.1	Genbank	gene	16233	16622	.	-	.	ID=gene-HMPREF1039_1059;Name=HMPREF1039_1059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1059
AFIJ01000020.1	Genbank	CDS	16233	16622	.	-	0	ID=cds-EGL40954.1;Parent=gene-HMPREF1039_1059;Dbxref=NCBI_GP:EGL40954.1;Name=EGL40954.1;Note=identified by match to protein family HMM PF03780;gbkey=CDS;locus_tag=HMPREF1039_1059;product=hypothetical protein;protein_id=EGL40954.1;transl_table=11
AFIJ01000020.1	Genbank	gene	16698	17255	.	-	.	ID=gene-HMPREF1039_1060;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=HMPREF1039_1060
AFIJ01000020.1	Genbank	CDS	16698	17255	.	-	0	ID=cds-EGL40933.1;Parent=gene-HMPREF1039_1060;Dbxref=NCBI_GP:EGL40933.1;Name=EGL40933.1;Note=identified by match to protein family HMM PF01132%3B match to protein family HMM PF08207%3B match to protein family HMM PF09285%3B match to protein family HMM TIGR00038;gbkey=CDS;gene=efp;locus_tag=HMPREF1039_1060;product=translation elongation factor P;protein_id=EGL40933.1;transl_table=11
AFIJ01000020.1	Genbank	gene	17270	18331	.	-	.	ID=gene-HMPREF1039_1061;Name=HMPREF1039_1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1061
AFIJ01000020.1	Genbank	CDS	17270	18331	.	-	0	ID=cds-EGL40923.1;Parent=gene-HMPREF1039_1061;Dbxref=NCBI_GP:EGL40923.1;Name=EGL40923.1;Note=identified by match to protein family HMM PF00557%3B match to protein family HMM PF01321;gbkey=CDS;locus_tag=HMPREF1039_1061;product=Creatinase;protein_id=EGL40923.1;transl_table=11
AFIJ01000020.1	Genbank	gene	18393	19109	.	-	.	ID=gene-HMPREF1039_1062;Name=HMPREF1039_1062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1062
AFIJ01000020.1	Genbank	CDS	18393	19109	.	-	0	ID=cds-EGL40914.1;Parent=gene-HMPREF1039_1062;Dbxref=NCBI_GP:EGL40914.1;Name=EGL40914.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM PF01479%3B match to protein family HMM TIGR00093;gbkey=CDS;locus_tag=HMPREF1039_1062;product=pseudouridylate synthase;protein_id=EGL40914.1;transl_table=11
AFIJ01000020.1	Genbank	gene	19119	19772	.	-	.	ID=gene-HMPREF1039_1063;Name=HMPREF1039_1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1063
AFIJ01000020.1	Genbank	CDS	19119	19772	.	-	0	ID=cds-EGL40936.1;Parent=gene-HMPREF1039_1063;Dbxref=NCBI_GP:EGL40936.1;Name=EGL40936.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF1039_1063;product=putative alpha-ribazole phosphatase;protein_id=EGL40936.1;transl_table=11
AFIJ01000020.1	Genbank	gene	19921	20409	.	-	.	ID=gene-HMPREF1039_1064;Name=HMPREF1039_1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1064
AFIJ01000020.1	Genbank	CDS	19921	20409	.	-	0	ID=cds-EGL40901.1;Parent=gene-HMPREF1039_1064;Dbxref=NCBI_GP:EGL40901.1;Name=EGL40901.1;Note=identified by match to protein family HMM PF00994%3B match to protein family HMM TIGR00177;gbkey=CDS;locus_tag=HMPREF1039_1064;product=molybdenum cofactor synthesis domain protein;protein_id=EGL40901.1;transl_table=11
AFIJ01000020.1	Genbank	gene	20644	21609	.	+	.	ID=gene-HMPREF1039_1065;Name=HMPREF1039_1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1065
AFIJ01000020.1	Genbank	CDS	20644	21609	.	+	0	ID=cds-EGL40910.1;Parent=gene-HMPREF1039_1065;Dbxref=NCBI_GP:EGL40910.1;Name=EGL40910.1;gbkey=CDS;locus_tag=HMPREF1039_1065;product=hypothetical protein;protein_id=EGL40910.1;transl_table=11
AFIJ01000020.1	Genbank	gene	21701	22633	.	-	.	ID=gene-HMPREF1039_1066;Name=HMPREF1039_1066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1066
AFIJ01000020.1	Genbank	CDS	21701	22633	.	-	0	ID=cds-EGL40877.1;Parent=gene-HMPREF1039_1066;Dbxref=NCBI_GP:EGL40877.1;Name=EGL40877.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1066;product=hypothetical protein;protein_id=EGL40877.1;transl_table=11
AFIJ01000020.1	Genbank	gene	22620	26909	.	-	.	ID=gene-HMPREF1039_1067;Name=HMPREF1039_1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1067
AFIJ01000020.1	Genbank	CDS	22620	26909	.	-	0	ID=cds-EGL40942.1;Parent=gene-HMPREF1039_1067;Dbxref=NCBI_GP:EGL40942.1;Name=EGL40942.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;locus_tag=HMPREF1039_1067;product=TonB-dependent receptor plug domain protein;protein_id=EGL40942.1;transl_table=11
AFIJ01000020.1	Genbank	gene	27094	27792	.	-	.	ID=gene-HMPREF1039_1068;Name=HMPREF1039_1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1068
AFIJ01000020.1	Genbank	CDS	27094	27792	.	-	0	ID=cds-EGL40928.1;Parent=gene-HMPREF1039_1068;Dbxref=NCBI_GP:EGL40928.1;Name=EGL40928.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF1039_1068;product=SNARE-like domain protein;protein_id=EGL40928.1;transl_table=11
AFIJ01000020.1	Genbank	gene	28022	31240	.	-	.	ID=gene-HMPREF1039_1069;Name=HMPREF1039_1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1069
AFIJ01000020.1	Genbank	CDS	28022	31240	.	-	0	ID=cds-EGL40922.1;Parent=gene-HMPREF1039_1069;Dbxref=NCBI_GP:EGL40922.1;Name=EGL40922.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1069;product=Hep/Hag repeat protein;protein_id=EGL40922.1;transl_table=11
AFIJ01000020.1	Genbank	gene	31670	32284	.	+	.	ID=gene-HMPREF1039_1070;Name=HMPREF1039_1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1070
AFIJ01000020.1	Genbank	CDS	31670	32284	.	+	0	ID=cds-EGL40903.1;Parent=gene-HMPREF1039_1070;Dbxref=NCBI_GP:EGL40903.1;Name=EGL40903.1;gbkey=CDS;locus_tag=HMPREF1039_1070;product=hypothetical protein;protein_id=EGL40903.1;transl_table=11
AFIJ01000020.1	Genbank	gene	32360	32710	.	-	.	ID=gene-HMPREF1039_1071;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF1039_1071
AFIJ01000020.1	Genbank	CDS	32360	32710	.	-	0	ID=cds-EGL40904.1;Parent=gene-HMPREF1039_1071;Dbxref=NCBI_GP:EGL40904.1;Name=EGL40904.1;Note=identified by match to protein family HMM PF00453%3B match to protein family HMM TIGR01032;gbkey=CDS;gene=rplT;locus_tag=HMPREF1039_1071;product=ribosomal protein L20;protein_id=EGL40904.1;transl_table=11
AFIJ01000020.1	Genbank	gene	32751	32948	.	-	.	ID=gene-HMPREF1039_1072;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=HMPREF1039_1072
AFIJ01000020.1	Genbank	CDS	32751	32948	.	-	0	ID=cds-EGL40926.1;Parent=gene-HMPREF1039_1072;Dbxref=NCBI_GP:EGL40926.1;Name=EGL40926.1;Note=identified by match to protein family HMM PF01632%3B match to protein family HMM TIGR00001;gbkey=CDS;gene=rpmI;locus_tag=HMPREF1039_1072;product=ribosomal protein L35;protein_id=EGL40926.1;transl_table=11
AFIJ01000020.1	Genbank	gene	32967	33431	.	-	.	ID=gene-HMPREF1039_1073;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1073
AFIJ01000020.1	Genbank	CDS	32967	33431	.	-	0	ID=cds-EGL40950.1;Parent=gene-HMPREF1039_1073;Dbxref=NCBI_GP:EGL40950.1;Name=EGL40950.1;Note=identified by match to protein family HMM PF00707%3B match to protein family HMM PF05198%3B match to protein family HMM TIGR00168;gbkey=CDS;gene=infC;locus_tag=HMPREF1039_1073;product=translation initiation factor IF-3;protein_id=EGL40950.1;transl_table=11
AFIJ01000020.1	Genbank	sequence_feature	33495	33605	.	-	.	ID=id-AFIJ01000020.1:33495..33605;Note=Ribosomal protein L20 leader;gbkey=misc_feature
AFIJ01000020.1	Genbank	gene	33697	33852	.	-	.	ID=gene-HMPREF1039_1075;Name=HMPREF1039_1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1075
AFIJ01000020.1	Genbank	CDS	33697	33852	.	-	0	ID=cds-EGL40898.1;Parent=gene-HMPREF1039_1075;Dbxref=NCBI_GP:EGL40898.1;Name=EGL40898.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1075;product=hypothetical protein;protein_id=EGL40898.1;transl_table=11
AFIJ01000020.1	Genbank	gene	34121	35302	.	+	.	ID=gene-HMPREF1039_1076;Name=HMPREF1039_1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1076
AFIJ01000020.1	Genbank	CDS	34121	35302	.	+	0	ID=cds-EGL40897.1;Parent=gene-HMPREF1039_1076;Dbxref=NCBI_GP:EGL40897.1;Name=EGL40897.1;Note=identified by match to protein family HMM PF00108%3B match to protein family HMM PF02801%3B match to protein family HMM PF02803%3B match to protein family HMM TIGR01930;gbkey=CDS;locus_tag=HMPREF1039_1076;product=acetyl-CoA C-acetyltransferase;protein_id=EGL40897.1;transl_table=11
AFIJ01000020.1	Genbank	gene	35491	36816	.	+	.	ID=gene-HMPREF1039_1077;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1077
AFIJ01000020.1	Genbank	CDS	35491	36816	.	+	0	ID=cds-EGL40939.1;Parent=gene-HMPREF1039_1077;Dbxref=NCBI_GP:EGL40939.1;Name=EGL40939.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;gene=potE;locus_tag=HMPREF1039_1077;product=putrescine-ornithine antiporter;protein_id=EGL40939.1;transl_table=11
AFIJ01000020.1	Genbank	gene	37144	39081	.	+	.	ID=gene-HMPREF1039_1078;Name=HMPREF1039_1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1078
AFIJ01000020.1	Genbank	CDS	37144	39081	.	+	0	ID=cds-EGL40951.1;Parent=gene-HMPREF1039_1078;Dbxref=NCBI_GP:EGL40951.1;Name=EGL40951.1;Note=identified by match to protein family HMM PF03169%3B match to protein family HMM TIGR00728%3B match to protein family HMM TIGR00733;gbkey=CDS;locus_tag=HMPREF1039_1078;product=oligopeptide transporter%2C OPT family;protein_id=EGL40951.1;transl_table=11
AFIJ01000020.1	Genbank	gene	39163	39594	.	-	.	ID=gene-HMPREF1039_1079;Name=HMPREF1039_1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1079
AFIJ01000020.1	Genbank	CDS	39163	39594	.	-	0	ID=cds-EGL40935.1;Parent=gene-HMPREF1039_1079;Dbxref=NCBI_GP:EGL40935.1;Name=EGL40935.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1079;product=hypothetical protein;protein_id=EGL40935.1;transl_table=11
AFIJ01000020.1	Genbank	sequence_feature	39783	40025	.	+	.	ID=id-AFIJ01000020.1:39783..40025;Note=T-box leader;gbkey=misc_feature
AFIJ01000020.1	Genbank	gene	40082	41368	.	+	.	ID=gene-HMPREF1039_1081;Name=HMPREF1039_1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1081
AFIJ01000020.1	Genbank	CDS	40082	41368	.	+	0	ID=cds-EGL40874.1;Parent=gene-HMPREF1039_1081;Dbxref=NCBI_GP:EGL40874.1;Name=EGL40874.1;Note=identified by match to protein family HMM PF01041%3B match to protein family HMM PF01053%3B match to protein family HMM PF01212%3B match to protein family HMM TIGR01326;gbkey=CDS;locus_tag=HMPREF1039_1081;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=EGL40874.1;transl_table=11
AFIJ01000020.1	Genbank	gene	41388	42314	.	+	.	ID=gene-HMPREF1039_1082;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1082
AFIJ01000020.1	Genbank	CDS	41388	42314	.	+	0	ID=cds-EGL40880.1;Parent=gene-HMPREF1039_1082;Dbxref=NCBI_GP:EGL40880.1;Name=EGL40880.1;Note=identified by match to protein family HMM PF04204%3B match to protein family HMM TIGR01001;gbkey=CDS;gene=metA;locus_tag=HMPREF1039_1082;product=homoserine O-succinyltransferase;protein_id=EGL40880.1;transl_table=11
AFIJ01000020.1	Genbank	gene	42364	43761	.	-	.	ID=gene-HMPREF1039_1083;Name=HMPREF1039_1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1083
AFIJ01000020.1	Genbank	CDS	42364	43761	.	-	0	ID=cds-EGL40946.1;Parent=gene-HMPREF1039_1083;Dbxref=NCBI_GP:EGL40946.1;Name=EGL40946.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF1039_1083;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EGL40946.1;transl_table=11
AFIJ01000020.1	Genbank	gene	43814	43981	.	-	.	ID=gene-HMPREF1039_1084;Name=HMPREF1039_1084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1084
AFIJ01000020.1	Genbank	CDS	43814	43981	.	-	0	ID=cds-EGL40879.1;Parent=gene-HMPREF1039_1084;Dbxref=NCBI_GP:EGL40879.1;Name=EGL40879.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1084;product=hypothetical protein;protein_id=EGL40879.1;transl_table=11
AFIJ01000020.1	Genbank	gene	43993	44721	.	-	.	ID=gene-HMPREF1039_1085;Name=HMPREF1039_1085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1085
AFIJ01000020.1	Genbank	CDS	43993	44721	.	-	0	ID=cds-EGL40907.1;Parent=gene-HMPREF1039_1085;Dbxref=NCBI_GP:EGL40907.1;Name=EGL40907.1;Note=identified by match to protein family HMM PF00392%3B match to protein family HMM PF07729;gbkey=CDS;locus_tag=HMPREF1039_1085;product=FCD domain protein;protein_id=EGL40907.1;transl_table=11
AFIJ01000020.1	Genbank	gene	44714	45589	.	-	.	ID=gene-HMPREF1039_1086;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1086
AFIJ01000020.1	Genbank	CDS	44714	45589	.	-	0	ID=cds-EGL40891.1;Parent=gene-HMPREF1039_1086;Dbxref=NCBI_GP:EGL40891.1;Name=EGL40891.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM TIGR00154;gbkey=CDS;gene=ispE;locus_tag=HMPREF1039_1086;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=EGL40891.1;transl_table=11
AFIJ01000020.1	Genbank	gene	45766	46701	.	+	.	ID=gene-HMPREF1039_1087;Name=HMPREF1039_1087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1087
AFIJ01000020.1	Genbank	CDS	45766	46701	.	+	0	ID=cds-EGL40889.1;Parent=gene-HMPREF1039_1087;Dbxref=NCBI_GP:EGL40889.1;Name=EGL40889.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=HMPREF1039_1087;product=hypothetical protein;protein_id=EGL40889.1;transl_table=11
AFIJ01000020.1	Genbank	gene	46661	46774	.	-	.	ID=gene-HMPREF1039_1088;Name=HMPREF1039_1088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1088
AFIJ01000020.1	Genbank	CDS	46661	46774	.	-	0	ID=cds-EGL40900.1;Parent=gene-HMPREF1039_1088;Dbxref=NCBI_GP:EGL40900.1;Name=EGL40900.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1088;product=hypothetical protein;protein_id=EGL40900.1;transl_table=11
AFIJ01000020.1	Genbank	gene	47038	47382	.	-	.	ID=gene-HMPREF1039_1089;Name=HMPREF1039_1089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1089
AFIJ01000020.1	Genbank	CDS	47038	47382	.	-	0	ID=cds-EGL40892.1;Parent=gene-HMPREF1039_1089;Dbxref=NCBI_GP:EGL40892.1;Name=EGL40892.1;Note=identified by match to protein family HMM PF01230;gbkey=CDS;locus_tag=HMPREF1039_1089;product=histidine triad domain protein;protein_id=EGL40892.1;transl_table=11
AFIJ01000020.1	Genbank	gene	47379	48701	.	-	.	ID=gene-HMPREF1039_1090;Name=yqeV;gbkey=Gene;gene=yqeV;gene_biotype=protein_coding;locus_tag=HMPREF1039_1090
AFIJ01000020.1	Genbank	CDS	47379	48701	.	-	0	ID=cds-EGL40924.1;Parent=gene-HMPREF1039_1090;Dbxref=NCBI_GP:EGL40924.1;Name=EGL40924.1;Note=identified by match to protein family HMM PF00919%3B match to protein family HMM PF04055%3B match to protein family HMM TIGR00089%3B match to protein family HMM TIGR01579;gbkey=CDS;gene=yqeV;locus_tag=HMPREF1039_1090;product=tRNA methylthiotransferase YqeV;protein_id=EGL40924.1;transl_table=11
AFIJ01000020.1	Genbank	gene	48705	49430	.	-	.	ID=gene-HMPREF1039_1091;Name=HMPREF1039_1091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1091
AFIJ01000020.1	Genbank	CDS	48705	49430	.	-	0	ID=cds-EGL40927.1;Parent=gene-HMPREF1039_1091;Dbxref=NCBI_GP:EGL40927.1;Name=EGL40927.1;Note=identified by match to protein family HMM PF04452%3B match to protein family HMM TIGR00046;gbkey=CDS;locus_tag=HMPREF1039_1091;product=RNA methyltransferase%2C RsmE family;protein_id=EGL40927.1;transl_table=11
AFIJ01000020.1	Genbank	gene	49431	50312	.	-	.	ID=gene-HMPREF1039_1092;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1092
AFIJ01000020.1	Genbank	CDS	49431	50312	.	-	0	ID=cds-EGL40931.1;Parent=gene-HMPREF1039_1092;Dbxref=NCBI_GP:EGL40931.1;Name=EGL40931.1;Note=identified by match to protein family HMM PF02475%3B match to protein family HMM PF05175%3B match to protein family HMM PF06325%3B match to protein family HMM PF08241%3B match to protein family HMM PF08242%3B match to protein family HMM TIGR00406;gbkey=CDS;gene=prmA;locus_tag=HMPREF1039_1092;product=ribosomal protein L11 methyltransferase;protein_id=EGL40931.1;transl_table=11
AFIJ01000020.1	Genbank	gene	50344	51561	.	-	.	ID=gene-HMPREF1039_1093;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_1093
AFIJ01000020.1	Genbank	CDS	50344	51561	.	-	0	ID=cds-EGL40925.1;Parent=gene-HMPREF1039_1093;Dbxref=NCBI_GP:EGL40925.1;Name=EGL40925.1;Note=identified by match to protein family HMM PF00226%3B match to protein family HMM PF00684%3B match to protein family HMM PF01556%3B match to protein family HMM TIGR02349;gbkey=CDS;gene=dnaJ;locus_tag=HMPREF1039_1093;product=chaperone protein DnaJ;protein_id=EGL40925.1;transl_table=11
AFIJ01000020.1	Genbank	gene	51588	52712	.	-	.	ID=gene-HMPREF1039_1094;Name=HMPREF1039_1094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1094
AFIJ01000020.1	Genbank	CDS	51588	52712	.	-	0	ID=cds-EGL40932.1;Parent=gene-HMPREF1039_1094;Dbxref=NCBI_GP:EGL40932.1;Name=EGL40932.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00012;gbkey=CDS;locus_tag=HMPREF1039_1094;product=DnaK family protein;protein_id=EGL40932.1;transl_table=11
AFIJ01000020.1	Genbank	gene	52714	53442	.	-	.	ID=gene-HMPREF1039_1095;Name=HMPREF1039_1095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1095
AFIJ01000020.1	Genbank	CDS	52714	53442	.	-	0	ID=cds-EGL40937.1;Parent=gene-HMPREF1039_1095;Dbxref=NCBI_GP:EGL40937.1;Name=EGL40937.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00012;gbkey=CDS;locus_tag=HMPREF1039_1095;product=DnaK family protein;protein_id=EGL40937.1;transl_table=11
AFIJ01000020.1	Genbank	gene	53473	54045	.	-	.	ID=gene-HMPREF1039_1096;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1096
AFIJ01000020.1	Genbank	CDS	53473	54045	.	-	0	ID=cds-EGL40878.1;Parent=gene-HMPREF1039_1096;Dbxref=NCBI_GP:EGL40878.1;Name=EGL40878.1;Note=identified by match to protein family HMM PF01025;gbkey=CDS;gene=grpE;locus_tag=HMPREF1039_1096;product=co-chaperone GrpE;protein_id=EGL40878.1;transl_table=11
AFIJ01000020.1	Genbank	gene	54060	55097	.	-	.	ID=gene-HMPREF1039_1097;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1097
AFIJ01000020.1	Genbank	CDS	54060	55097	.	-	0	ID=cds-EGL40899.1;Parent=gene-HMPREF1039_1097;Dbxref=NCBI_GP:EGL40899.1;Name=EGL40899.1;Note=identified by match to protein family HMM PF01628%3B match to protein family HMM TIGR00331;gbkey=CDS;gene=hrcA;locus_tag=HMPREF1039_1097;product=heat-inducible transcription repressor HrcA;protein_id=EGL40899.1;transl_table=11
AFIJ01000020.1	Genbank	gene	55312	56595	.	+	.	ID=gene-HMPREF1039_1098;Name=HMPREF1039_1098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1098
AFIJ01000020.1	Genbank	CDS	55312	56595	.	+	0	ID=cds-EGL40873.1;Parent=gene-HMPREF1039_1098;Dbxref=NCBI_GP:EGL40873.1;Name=EGL40873.1;Note=identified by match to protein family HMM PF02127;gbkey=CDS;locus_tag=HMPREF1039_1098;product=aminopeptidase I zinc metalloprotease (M18);protein_id=EGL40873.1;transl_table=11
AFIJ01000020.1	Genbank	gene	56634	56753	.	-	.	ID=gene-HMPREF1039_1099;Name=HMPREF1039_1099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1099
AFIJ01000020.1	Genbank	CDS	56634	56753	.	-	0	ID=cds-EGL40918.1;Parent=gene-HMPREF1039_1099;Dbxref=NCBI_GP:EGL40918.1;Name=EGL40918.1;gbkey=CDS;locus_tag=HMPREF1039_1099;product=hypothetical protein;protein_id=EGL40918.1;transl_table=11
AFIJ01000020.1	Genbank	gene	56790	57143	.	+	.	ID=gene-HMPREF1039_1100;Name=HMPREF1039_1100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1100
AFIJ01000020.1	Genbank	CDS	56790	57143	.	+	0	ID=cds-EGL40916.1;Parent=gene-HMPREF1039_1100;Dbxref=NCBI_GP:EGL40916.1;Name=EGL40916.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF1039_1100;product=DNA-binding helix-turn-helix protein;protein_id=EGL40916.1;transl_table=11
AFIJ01000020.1	Genbank	gene	57170	57838	.	+	.	ID=gene-HMPREF1039_1101;Name=HMPREF1039_1101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1101
AFIJ01000020.1	Genbank	CDS	57170	57838	.	+	0	ID=cds-EGL40894.1;Parent=gene-HMPREF1039_1101;Dbxref=NCBI_GP:EGL40894.1;Name=EGL40894.1;Note=identified by match to protein family HMM PF01205%3B match to protein family HMM PF09186%3B match to protein family HMM TIGR00257;gbkey=CDS;locus_tag=HMPREF1039_1101;product=YigZ family protein;protein_id=EGL40894.1;transl_table=11
AFIJ01000020.1	Genbank	binding_site	57911	58008	.	+	.	ID=id-AFIJ01000020.1:57911..58008;Note=SAM riboswitch (S box leader)%3B Rfam score 64.29;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162
AFIJ01000020.1	Genbank	gene	58083	59126	.	+	.	ID=gene-HMPREF1039_1103;Name=HMPREF1039_1103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1103
AFIJ01000020.1	Genbank	CDS	58083	59126	.	+	0	ID=cds-EGL40908.1;Parent=gene-HMPREF1039_1103;Dbxref=NCBI_GP:EGL40908.1;Name=EGL40908.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF09383;gbkey=CDS;locus_tag=HMPREF1039_1103;product=putative D-methionine ABC transporter%2C ATP-binding protein;protein_id=EGL40908.1;transl_table=11
AFIJ01000020.1	Genbank	gene	59107	59760	.	+	.	ID=gene-HMPREF1039_1104;Name=metI;gbkey=Gene;gene=metI;gene_biotype=protein_coding;locus_tag=HMPREF1039_1104
AFIJ01000020.1	Genbank	CDS	59107	59760	.	+	0	ID=cds-EGL40872.1;Parent=gene-HMPREF1039_1104;Dbxref=NCBI_GP:EGL40872.1;Name=EGL40872.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;gene=metI;locus_tag=HMPREF1039_1104;product=ABC transporter%2C permease protein;protein_id=EGL40872.1;transl_table=11
AFIJ01000020.1	Genbank	gene	59875	59963	.	+	.	ID=gene-HMPREF1039_1105;Name=HMPREF1039_1105;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1105
AFIJ01000020.1	Genbank	tRNA	59875	59963	.	+	.	ID=rna-HMPREF1039_1105;Parent=gene-HMPREF1039_1105;gbkey=tRNA;locus_tag=HMPREF1039_1105;product=tRNA-Ser
AFIJ01000020.1	Genbank	exon	59875	59963	.	+	.	ID=exon-HMPREF1039_1105-1;Parent=rna-HMPREF1039_1105;gbkey=tRNA;locus_tag=HMPREF1039_1105;product=tRNA-Ser
AFIJ01000020.1	Genbank	gene	60110	60733	.	-	.	ID=gene-HMPREF1039_1106;Name=HMPREF1039_1106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1106
AFIJ01000020.1	Genbank	CDS	60110	60733	.	-	0	ID=cds-EGL40955.1;Parent=gene-HMPREF1039_1106;Dbxref=NCBI_GP:EGL40955.1;Name=EGL40955.1;gbkey=CDS;locus_tag=HMPREF1039_1106;product=hypothetical protein;protein_id=EGL40955.1;transl_table=11
AFIJ01000020.1	Genbank	gene	60761	60928	.	-	.	ID=gene-HMPREF1039_1107;Name=HMPREF1039_1107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1107
AFIJ01000020.1	Genbank	CDS	60761	60928	.	-	0	ID=cds-EGL40934.1;Parent=gene-HMPREF1039_1107;Dbxref=NCBI_GP:EGL40934.1;Name=EGL40934.1;gbkey=CDS;locus_tag=HMPREF1039_1107;product=hypothetical protein;protein_id=EGL40934.1;transl_table=11
AFIJ01000020.1	Genbank	gene	61025	62476	.	-	.	ID=gene-HMPREF1039_1108;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1108
AFIJ01000020.1	Genbank	CDS	61025	62476	.	-	0	ID=cds-EGL40896.1;Parent=gene-HMPREF1039_1108;Dbxref=NCBI_GP:EGL40896.1;Name=EGL40896.1;Note=identified by match to protein family HMM PF04095%3B match to protein family HMM TIGR01513;gbkey=CDS;gene=pncB;locus_tag=HMPREF1039_1108;product=nicotinate phosphoribosyltransferase;protein_id=EGL40896.1;transl_table=11
AFIJ01000020.1	Genbank	gene	62672	63553	.	+	.	ID=gene-HMPREF1039_1109;Name=HMPREF1039_1109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1109
AFIJ01000020.1	Genbank	CDS	62672	63553	.	+	0	ID=cds-EGL40911.1;Parent=gene-HMPREF1039_1109;Dbxref=NCBI_GP:EGL40911.1;Name=EGL40911.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF1039_1109;product=putative membrane protein;protein_id=EGL40911.1;transl_table=11
AFIJ01000020.1	Genbank	gene	63686	64936	.	+	.	ID=gene-HMPREF1039_1110;Name=HMPREF1039_1110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1110
AFIJ01000020.1	Genbank	CDS	63686	64936	.	+	0	ID=cds-EGL40940.1;Parent=gene-HMPREF1039_1110;Dbxref=NCBI_GP:EGL40940.1;Name=EGL40940.1;Note=identified by match to protein family HMM PF00390%3B match to protein family HMM PF03949;gbkey=CDS;locus_tag=HMPREF1039_1110;product=malic enzyme%2C NAD binding domain protein;protein_id=EGL40940.1;transl_table=11
AFIJ01000020.1	Genbank	gene	65028	65894	.	-	.	ID=gene-HMPREF1039_1111;Name=HMPREF1039_1111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1111
AFIJ01000020.1	Genbank	CDS	65028	65894	.	-	0	ID=cds-EGL40952.1;Parent=gene-HMPREF1039_1111;Dbxref=NCBI_GP:EGL40952.1;Name=EGL40952.1;gbkey=CDS;locus_tag=HMPREF1039_1111;product=hypothetical protein;protein_id=EGL40952.1;transl_table=11
AFIJ01000020.1	Genbank	gene	65919	66038	.	-	.	ID=gene-HMPREF1039_1112;Name=HMPREF1039_1112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1112
AFIJ01000020.1	Genbank	CDS	65919	66038	.	-	0	ID=cds-EGL40912.1;Parent=gene-HMPREF1039_1112;Dbxref=NCBI_GP:EGL40912.1;Name=EGL40912.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1112;product=hypothetical protein;protein_id=EGL40912.1;transl_table=11
AFIJ01000020.1	Genbank	gene	66052	67038	.	-	.	ID=gene-HMPREF1039_1113;Name=HMPREF1039_1113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1113
AFIJ01000020.1	Genbank	CDS	66052	67038	.	-	0	ID=cds-EGL40915.1;Parent=gene-HMPREF1039_1113;Dbxref=NCBI_GP:EGL40915.1;Name=EGL40915.1;Note=identified by match to protein family HMM PF03601;gbkey=CDS;locus_tag=HMPREF1039_1113;product=hypothetical protein;protein_id=EGL40915.1;transl_table=11
AFIJ01000020.1	Genbank	gene	67208	68131	.	+	.	ID=gene-HMPREF1039_1114;Name=HMPREF1039_1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1114
AFIJ01000020.1	Genbank	CDS	67208	68131	.	+	0	ID=cds-EGL40906.1;Parent=gene-HMPREF1039_1114;Dbxref=NCBI_GP:EGL40906.1;Name=EGL40906.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF1039_1114;product=LysR substrate binding domain protein;protein_id=EGL40906.1;transl_table=11
AFIJ01000020.1	Genbank	gene	68189	69178	.	+	.	ID=gene-HMPREF1039_1115;Name=HMPREF1039_1115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1115
AFIJ01000020.1	Genbank	CDS	68189	69178	.	+	0	ID=cds-EGL40943.1;Parent=gene-HMPREF1039_1115;Dbxref=NCBI_GP:EGL40943.1;Name=EGL40943.1;Note=identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF1039_1115;product=site-specific recombinase%2C phage integrase family;protein_id=EGL40943.1;transl_table=11
AFIJ01000020.1	Genbank	gene	69162	69335	.	-	.	ID=gene-HMPREF1039_1116;Name=HMPREF1039_1116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1116
AFIJ01000020.1	Genbank	CDS	69162	69335	.	-	0	ID=cds-EGL40885.1;Parent=gene-HMPREF1039_1116;Dbxref=NCBI_GP:EGL40885.1;Name=EGL40885.1;gbkey=CDS;locus_tag=HMPREF1039_1116;product=hypothetical protein;protein_id=EGL40885.1;transl_table=11
AFIJ01000020.1	Genbank	gene	69348	69896	.	-	.	ID=gene-HMPREF1039_1117;Name=HMPREF1039_1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1117
AFIJ01000020.1	Genbank	CDS	69348	69896	.	-	0	ID=cds-EGL40890.1;Parent=gene-HMPREF1039_1117;Dbxref=NCBI_GP:EGL40890.1;Name=EGL40890.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;locus_tag=HMPREF1039_1117;product=hypothetical protein;protein_id=EGL40890.1;transl_table=11
AFIJ01000020.1	Genbank	gene	70122	71060	.	-	.	ID=gene-HMPREF1039_1118;Name=HMPREF1039_1118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1118
AFIJ01000020.1	Genbank	CDS	70122	71060	.	-	0	ID=cds-EGL40917.1;Parent=gene-HMPREF1039_1118;Dbxref=NCBI_GP:EGL40917.1;Name=EGL40917.1;Note=identified by match to protein family HMM PF02779%3B match to protein family HMM PF02780;gbkey=CDS;locus_tag=HMPREF1039_1118;product=Transketolase%2C pyridine binding domain protein;protein_id=EGL40917.1;transl_table=11
AFIJ01000020.1	Genbank	gene	71060	71881	.	-	.	ID=gene-HMPREF1039_1119;Name=HMPREF1039_1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1119
AFIJ01000020.1	Genbank	CDS	71060	71881	.	-	0	ID=cds-EGL40881.1;Parent=gene-HMPREF1039_1119;Dbxref=NCBI_GP:EGL40881.1;Name=EGL40881.1;Note=identified by match to protein family HMM PF00456;gbkey=CDS;locus_tag=HMPREF1039_1119;product=Transketolase%2C thiamine diphosphate binding domain protein;protein_id=EGL40881.1;transl_table=11
AFIJ01000020.1	Genbank	gene	72115	72999	.	-	.	ID=gene-HMPREF1039_1120;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1120
AFIJ01000020.1	Genbank	CDS	72115	72999	.	-	0	ID=cds-EGL40893.1;Parent=gene-HMPREF1039_1120;Dbxref=NCBI_GP:EGL40893.1;Name=EGL40893.1;Note=identified by match to protein family HMM PF00398%3B match to protein family HMM TIGR00755;gbkey=CDS;gene=ksgA;locus_tag=HMPREF1039_1120;product=dimethyladenosine transferase;protein_id=EGL40893.1;transl_table=11
AFIJ01000020.1	Genbank	gene	72996	73544	.	-	.	ID=gene-HMPREF1039_1121;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=HMPREF1039_1121
AFIJ01000020.1	Genbank	CDS	72996	73544	.	-	0	ID=cds-EGL40929.1;Parent=gene-HMPREF1039_1121;Dbxref=NCBI_GP:EGL40929.1;Name=EGL40929.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM TIGR00334;gbkey=CDS;gene=rnmV;locus_tag=HMPREF1039_1121;product=ribonuclease M5;protein_id=EGL40929.1;transl_table=11
AFIJ01000020.1	Genbank	gene	73537	74793	.	-	.	ID=gene-HMPREF1039_1122;Name=HMPREF1039_1122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1122
AFIJ01000020.1	Genbank	CDS	73537	74793	.	-	0	ID=cds-EGL40949.1;Parent=gene-HMPREF1039_1122;Dbxref=NCBI_GP:EGL40949.1;Name=EGL40949.1;Note=identified by match to protein family HMM PF06838;gbkey=CDS;locus_tag=HMPREF1039_1122;product=aluminum resistance protein;protein_id=EGL40949.1;transl_table=11
AFIJ01000020.1	Genbank	gene	74798	75742	.	-	.	ID=gene-HMPREF1039_1123;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1123
AFIJ01000020.1	Genbank	CDS	74798	75742	.	-	0	ID=cds-EGL40884.1;Parent=gene-HMPREF1039_1123;Dbxref=NCBI_GP:EGL40884.1;Name=EGL40884.1;Note=identified by match to protein family HMM PF01715%3B match to protein family HMM TIGR00174;gbkey=CDS;gene=miaA;locus_tag=HMPREF1039_1123;product=tRNA dimethylallyltransferase;protein_id=EGL40884.1;transl_table=11
AFIJ01000020.1	Genbank	gene	75735	76520	.	-	.	ID=gene-HMPREF1039_1124;Name=HMPREF1039_1124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1124
AFIJ01000020.1	Genbank	CDS	75735	76520	.	-	0	ID=cds-EGL40944.1;Parent=gene-HMPREF1039_1124;Dbxref=NCBI_GP:EGL40944.1;Name=EGL40944.1;Note=identified by match to protein family HMM PF04445;gbkey=CDS;locus_tag=HMPREF1039_1124;product=hypothetical protein;protein_id=EGL40944.1;transl_table=11
AFIJ01000020.1	Genbank	gene	76517	78415	.	-	.	ID=gene-HMPREF1039_1125;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=HMPREF1039_1125
AFIJ01000020.1	Genbank	CDS	76517	78415	.	-	0	ID=cds-EGL40905.1;Parent=gene-HMPREF1039_1125;Dbxref=NCBI_GP:EGL40905.1;Name=EGL40905.1;Note=identified by match to protein family HMM PF01119%3B match to protein family HMM PF02518%3B match to protein family HMM PF08676%3B match to protein family HMM TIGR00585;gbkey=CDS;gene=mutL;locus_tag=HMPREF1039_1125;product=DNA mismatch repair domain protein;protein_id=EGL40905.1;transl_table=11
AFIJ01000020.1	Genbank	gene	78412	80676	.	-	.	ID=gene-HMPREF1039_1126;Name=mutS;end_range=80676,.;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1126;partial=true
AFIJ01000020.1	Genbank	CDS	78412	80676	.	-	0	ID=cds-EGL40888.1;Parent=gene-HMPREF1039_1126;Dbxref=NCBI_GP:EGL40888.1;Name=EGL40888.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00488%3B match to protein family HMM PF05190%3B match to protein family HMM PF05192%3B match to protein family HMM TIGR01070;end_range=80676,.;gbkey=CDS;gene=mutS;locus_tag=HMPREF1039_1126;partial=true;product=DNA mismatch repair protein MutS;protein_id=EGL40888.1;transl_table=11
##sequence-region AFIJ01000019.1 1 11839
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000019.1	Genbank	region	1	11839	.	+	.	ID=AFIJ01000019.1:1..11839;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000019.1	Genbank	gene	120	545	.	+	.	ID=gene-HMPREF1039_1571;Name=HMPREF1039_1571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1571
AFIJ01000019.1	Genbank	CDS	120	545	.	+	0	ID=cds-EGL41001.1;Parent=gene-HMPREF1039_1571;Dbxref=NCBI_GP:EGL41001.1;Name=EGL41001.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_1571;product=hypothetical protein;protein_id=EGL41001.1;transl_table=11
AFIJ01000019.1	Genbank	gene	627	717	.	+	.	ID=gene-HMPREF1039_1572;Name=HMPREF1039_1572;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1572
AFIJ01000019.1	Genbank	tRNA	627	717	.	+	.	ID=rna-HMPREF1039_1572;Parent=gene-HMPREF1039_1572;gbkey=tRNA;locus_tag=HMPREF1039_1572;product=tRNA-Ser
AFIJ01000019.1	Genbank	exon	627	717	.	+	.	ID=exon-HMPREF1039_1572-1;Parent=rna-HMPREF1039_1572;gbkey=tRNA;locus_tag=HMPREF1039_1572;product=tRNA-Ser
AFIJ01000019.1	Genbank	gene	795	1643	.	+	.	ID=gene-HMPREF1039_1573;Name=HMPREF1039_1573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1573
AFIJ01000019.1	Genbank	CDS	795	1643	.	+	0	ID=cds-EGL40997.1;Parent=gene-HMPREF1039_1573;Dbxref=NCBI_GP:EGL40997.1;Name=EGL40997.1;Note=identified by match to protein family HMM PF02578%3B match to protein family HMM TIGR00726;gbkey=CDS;locus_tag=HMPREF1039_1573;product=conserved hypothetical protein%2C YfiH family;protein_id=EGL40997.1;transl_table=11
AFIJ01000019.1	Genbank	gene	1768	2451	.	+	.	ID=gene-HMPREF1039_1574;Name=HMPREF1039_1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1574
AFIJ01000019.1	Genbank	CDS	1768	2451	.	+	0	ID=cds-EGL40993.1;Parent=gene-HMPREF1039_1574;Dbxref=NCBI_GP:EGL40993.1;Name=EGL40993.1;Note=identified by match to protein family HMM PF01168%3B match to protein family HMM TIGR00044;gbkey=CDS;locus_tag=HMPREF1039_1574;product=pyridoxal phosphate enzyme%2C YggS family;protein_id=EGL40993.1;transl_table=11
AFIJ01000019.1	Genbank	gene	2465	2977	.	+	.	ID=gene-HMPREF1039_1575;Name=HMPREF1039_1575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1575
AFIJ01000019.1	Genbank	CDS	2465	2977	.	+	0	ID=cds-EGL40989.1;Parent=gene-HMPREF1039_1575;Dbxref=NCBI_GP:EGL40989.1;Name=EGL40989.1;Note=identified by match to protein family HMM PF04472;gbkey=CDS;locus_tag=HMPREF1039_1575;product=hypothetical protein;protein_id=EGL40989.1;transl_table=11
AFIJ01000019.1	Genbank	gene	2987	3772	.	+	.	ID=gene-HMPREF1039_1576;Name=HMPREF1039_1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1576
AFIJ01000019.1	Genbank	CDS	2987	3772	.	+	0	ID=cds-EGL40998.1;Parent=gene-HMPREF1039_1576;Dbxref=NCBI_GP:EGL40998.1;Name=EGL40998.1;Note=identified by match to protein family HMM PF01479;gbkey=CDS;locus_tag=HMPREF1039_1576;product=S4 domain protein;protein_id=EGL40998.1;transl_table=11
AFIJ01000019.1	Genbank	gene	3819	4325	.	+	.	ID=gene-HMPREF1039_1577;Name=HMPREF1039_1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1577
AFIJ01000019.1	Genbank	CDS	3819	4325	.	+	0	ID=cds-EGL40991.1;Parent=gene-HMPREF1039_1577;Dbxref=NCBI_GP:EGL40991.1;Name=EGL40991.1;Note=identified by match to protein family HMM PF05103%3B match to protein family HMM TIGR03544;gbkey=CDS;locus_tag=HMPREF1039_1577;product=DivIVA domain protein;protein_id=EGL40991.1;transl_table=11
AFIJ01000019.1	Genbank	gene	4403	4765	.	+	.	ID=gene-HMPREF1039_1578;Name=HMPREF1039_1578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1578
AFIJ01000019.1	Genbank	CDS	4403	4765	.	+	0	ID=cds-EGL40996.1;Parent=gene-HMPREF1039_1578;Dbxref=NCBI_GP:EGL40996.1;Name=EGL40996.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1578;product=hypothetical protein;protein_id=EGL40996.1;transl_table=11
AFIJ01000019.1	Genbank	gene	4762	5571	.	+	.	ID=gene-HMPREF1039_1579;Name=HMPREF1039_1579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1579
AFIJ01000019.1	Genbank	CDS	4762	5571	.	+	0	ID=cds-EGL40992.1;Parent=gene-HMPREF1039_1579;Dbxref=NCBI_GP:EGL40992.1;Name=EGL40992.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=HMPREF1039_1579;product=Cof-like hydrolase;protein_id=EGL40992.1;transl_table=11
AFIJ01000019.1	Genbank	gene	5583	6485	.	+	.	ID=gene-HMPREF1039_1580;Name=HMPREF1039_1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1580
AFIJ01000019.1	Genbank	CDS	5583	6485	.	+	0	ID=cds-EGL40988.1;Parent=gene-HMPREF1039_1580;Dbxref=NCBI_GP:EGL40988.1;Name=EGL40988.1;Note=identified by match to protein family HMM PF03668;gbkey=CDS;locus_tag=HMPREF1039_1580;product=hypothetical protein;protein_id=EGL40988.1;transl_table=11
AFIJ01000019.1	Genbank	gene	6501	7847	.	+	.	ID=gene-HMPREF1039_1581;Name=HMPREF1039_1581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1581
AFIJ01000019.1	Genbank	CDS	6501	7847	.	+	0	ID=cds-EGL40995.1;Parent=gene-HMPREF1039_1581;Dbxref=NCBI_GP:EGL40995.1;Name=EGL40995.1;Note=identified by match to protein family HMM PF01933%3B match to protein family HMM TIGR01826;gbkey=CDS;locus_tag=HMPREF1039_1581;product=hypothetical protein;protein_id=EGL40995.1;transl_table=11
AFIJ01000019.1	Genbank	gene	7857	8792	.	+	.	ID=gene-HMPREF1039_1582;Name=HMPREF1039_1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1582
AFIJ01000019.1	Genbank	CDS	7857	8792	.	+	0	ID=cds-EGL41000.1;Parent=gene-HMPREF1039_1582;Dbxref=NCBI_GP:EGL41000.1;Name=EGL41000.1;Note=identified by match to protein family HMM PF02650%3B match to protein family HMM TIGR00647;gbkey=CDS;locus_tag=HMPREF1039_1582;product=hypothetical protein;protein_id=EGL41000.1;transl_table=11
AFIJ01000019.1	Genbank	gene	8779	9990	.	+	.	ID=gene-HMPREF1039_1583;Name=HMPREF1039_1583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1583
AFIJ01000019.1	Genbank	CDS	8779	9990	.	+	0	ID=cds-EGL40990.1;Parent=gene-HMPREF1039_1583;Dbxref=NCBI_GP:EGL40990.1;Name=EGL40990.1;gbkey=CDS;locus_tag=HMPREF1039_1583;product=hypothetical protein;protein_id=EGL40990.1;transl_table=11
AFIJ01000019.1	Genbank	gene	10080	10724	.	-	.	ID=gene-HMPREF1039_1584;Name=HMPREF1039_1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1584
AFIJ01000019.1	Genbank	CDS	10080	10724	.	-	0	ID=cds-EGL40994.1;Parent=gene-HMPREF1039_1584;Dbxref=NCBI_GP:EGL40994.1;Name=EGL40994.1;Note=identified by match to protein family HMM PF00702;gbkey=CDS;locus_tag=HMPREF1039_1584;product=haloacid dehalogenase-like hydrolase;protein_id=EGL40994.1;transl_table=11
AFIJ01000019.1	Genbank	gene	10724	11503	.	-	.	ID=gene-HMPREF1039_1585;Name=HMPREF1039_1585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1585
AFIJ01000019.1	Genbank	CDS	10724	11503	.	-	0	ID=cds-EGL40999.1;Parent=gene-HMPREF1039_1585;Dbxref=NCBI_GP:EGL40999.1;Name=EGL40999.1;Note=identified by match to protein family HMM PF00497;gbkey=CDS;locus_tag=HMPREF1039_1585;product=ABC transporter%2C substrate-binding protein%2C family 3;protein_id=EGL40999.1;transl_table=11
##sequence-region AFIJ01000018.1 1 43361
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000018.1	Genbank	region	1	43361	.	+	.	ID=AFIJ01000018.1:1..43361;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000018.1	Genbank	gene	57	1022	.	-	.	ID=gene-HMPREF1039_1303;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=HMPREF1039_1303
AFIJ01000018.1	Genbank	CDS	57	1022	.	-	0	ID=cds-EGL41027.1;Parent=gene-HMPREF1039_1303;Dbxref=NCBI_GP:EGL41027.1;Name=EGL41027.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01116%3B match to protein family HMM TIGR00167%3B match to protein family HMM TIGR01859;gbkey=CDS;gene=fba;locus_tag=HMPREF1039_1303;product=fructose-1%2C6-bisphosphate aldolase%2C class II;protein_id=EGL41027.1;transl_table=11
AFIJ01000018.1	Genbank	gene	1035	1940	.	-	.	ID=gene-HMPREF1039_1304;Name=HMPREF1039_1304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1304
AFIJ01000018.1	Genbank	CDS	1035	1940	.	-	0	ID=cds-EGL41033.1;Parent=gene-HMPREF1039_1304;Dbxref=NCBI_GP:EGL41033.1;Name=EGL41033.1;Note=identified by match to protein family HMM PF00849%3B match to protein family HMM TIGR00005;gbkey=CDS;locus_tag=HMPREF1039_1304;product=pseudouridine synthase%2C RluA family;protein_id=EGL41033.1;transl_table=11
AFIJ01000018.1	Genbank	gene	2142	3953	.	+	.	ID=gene-HMPREF1039_1305;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=HMPREF1039_1305
AFIJ01000018.1	Genbank	CDS	2142	3953	.	+	0	ID=cds-EGL41036.1;Parent=gene-HMPREF1039_1305;Dbxref=NCBI_GP:EGL41036.1;Name=EGL41036.1;Note=identified by match to protein family HMM PF01751%3B match to protein family HMM PF01807%3B match to protein family HMM PF08275%3B match to protein family HMM TIGR01391;gbkey=CDS;gene=dnaG;locus_tag=HMPREF1039_1305;product=DNA primase;protein_id=EGL41036.1;transl_table=11
AFIJ01000018.1	Genbank	gene	3959	5230	.	+	.	ID=gene-HMPREF1039_1306;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1306
AFIJ01000018.1	Genbank	CDS	3959	5230	.	+	0	ID=cds-EGL41055.1;Parent=gene-HMPREF1039_1306;Dbxref=NCBI_GP:EGL41055.1;Name=EGL41055.1;Note=identified by match to protein family HMM PF00140%3B match to protein family HMM PF03979%3B match to protein family HMM PF04539%3B match to protein family HMM PF04542%3B match to protein family HMM PF04545%3B match to protein family HMM TIGR02393%3B match to protein family HMM TIGR02937;gbkey=CDS;gene=rpoD;locus_tag=HMPREF1039_1306;product=RNA polymerase sigma factor RpoD;protein_id=EGL41055.1;transl_table=11
AFIJ01000018.1	Genbank	gene	5294	5368	.	+	.	ID=gene-HMPREF1039_1307;Name=HMPREF1039_1307;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1307
AFIJ01000018.1	Genbank	tRNA	5294	5368	.	+	.	ID=rna-HMPREF1039_1307;Parent=gene-HMPREF1039_1307;gbkey=tRNA;locus_tag=HMPREF1039_1307;product=tRNA-Met
AFIJ01000018.1	Genbank	exon	5294	5368	.	+	.	ID=exon-HMPREF1039_1307-1;Parent=rna-HMPREF1039_1307;gbkey=tRNA;locus_tag=HMPREF1039_1307;product=tRNA-Met
AFIJ01000018.1	Genbank	gene	5588	6262	.	+	.	ID=gene-HMPREF1039_1308;Name=HMPREF1039_1308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1308
AFIJ01000018.1	Genbank	CDS	5588	6262	.	+	0	ID=cds-EGL41037.1;Parent=gene-HMPREF1039_1308;Dbxref=NCBI_GP:EGL41037.1;Name=EGL41037.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00175;gbkey=CDS;locus_tag=HMPREF1039_1308;product=oxidoreductase NAD-binding domain protein;protein_id=EGL41037.1;transl_table=11
AFIJ01000018.1	Genbank	gene	6259	7173	.	+	.	ID=gene-HMPREF1039_1309;Name=HMPREF1039_1309;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1309
AFIJ01000018.1	Genbank	CDS	6259	7173	.	+	0	ID=cds-EGL41030.1;Parent=gene-HMPREF1039_1309;Dbxref=NCBI_GP:EGL41030.1;Name=EGL41030.1;Note=identified by match to protein family HMM PF01180%3B match to protein family HMM TIGR01037;gbkey=CDS;locus_tag=HMPREF1039_1309;product=dihydroorotate dehydrogenase 1B;protein_id=EGL41030.1;transl_table=11
AFIJ01000018.1	Genbank	gene	7358	7876	.	+	.	ID=gene-HMPREF1039_1310;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1310
AFIJ01000018.1	Genbank	CDS	7358	7876	.	+	0	ID=cds-EGL41075.1;Parent=gene-HMPREF1039_1310;Dbxref=NCBI_GP:EGL41075.1;Name=EGL41075.1;Note=identified by match to protein family HMM PF00731%3B match to protein family HMM TIGR01162;gbkey=CDS;gene=purE;locus_tag=HMPREF1039_1310;product=phosphoribosylaminoimidazole carboxylase%2C catalytic subunit;protein_id=EGL41075.1;transl_table=11
AFIJ01000018.1	Genbank	gene	7901	9328	.	+	.	ID=gene-HMPREF1039_1311;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1311
AFIJ01000018.1	Genbank	CDS	7901	9328	.	+	0	ID=cds-EGL41029.1;Parent=gene-HMPREF1039_1311;Dbxref=NCBI_GP:EGL41029.1;Name=EGL41029.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM PF00310%3B match to protein family HMM TIGR01134;gbkey=CDS;gene=purF;locus_tag=HMPREF1039_1311;product=amidophosphoribosyltransferase;protein_id=EGL41029.1;transl_table=11
AFIJ01000018.1	Genbank	gene	9306	10373	.	+	.	ID=gene-HMPREF1039_1312;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=HMPREF1039_1312
AFIJ01000018.1	Genbank	CDS	9306	10373	.	+	0	ID=cds-EGL41072.1;Parent=gene-HMPREF1039_1312;Dbxref=NCBI_GP:EGL41072.1;Name=EGL41072.1;Note=identified by match to protein family HMM PF00586%3B match to protein family HMM PF02769%3B match to protein family HMM TIGR00878;gbkey=CDS;gene=purM;locus_tag=HMPREF1039_1312;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=EGL41072.1;transl_table=11
AFIJ01000018.1	Genbank	gene	10366	10992	.	+	.	ID=gene-HMPREF1039_1313;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=HMPREF1039_1313
AFIJ01000018.1	Genbank	CDS	10366	10992	.	+	0	ID=cds-EGL41064.1;Parent=gene-HMPREF1039_1313;Dbxref=NCBI_GP:EGL41064.1;Name=EGL41064.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00551%3B match to protein family HMM TIGR00639;gbkey=CDS;gene=purN;locus_tag=HMPREF1039_1313;product=phosphoribosylglycinamide formyltransferase;protein_id=EGL41064.1;transl_table=11
AFIJ01000018.1	Genbank	gene	10992	11597	.	+	.	ID=gene-HMPREF1039_1314;Name=HMPREF1039_1314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1314
AFIJ01000018.1	Genbank	CDS	10992	11597	.	+	0	ID=cds-EGL41067.1;Parent=gene-HMPREF1039_1314;Dbxref=NCBI_GP:EGL41067.1;Name=EGL41067.1;Note=identified by match to protein family HMM PF02142;gbkey=CDS;locus_tag=HMPREF1039_1314;product=MGS-like domain protein;protein_id=EGL41067.1;transl_table=11
AFIJ01000018.1	Genbank	gene	11594	12880	.	+	.	ID=gene-HMPREF1039_1315;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1315
AFIJ01000018.1	Genbank	CDS	11594	12880	.	+	0	ID=cds-EGL41046.1;Parent=gene-HMPREF1039_1315;Dbxref=NCBI_GP:EGL41046.1;Name=EGL41046.1;Note=identified by match to protein family HMM PF01071%3B match to protein family HMM PF02222%3B match to protein family HMM PF02655%3B match to protein family HMM PF02843%3B match to protein family HMM PF02844%3B match to protein family HMM TIGR00877;gbkey=CDS;gene=purD;locus_tag=HMPREF1039_1315;product=phosphoribosylamine--glycine ligase;protein_id=EGL41046.1;transl_table=11
AFIJ01000018.1	Genbank	gene	13141	13770	.	+	.	ID=gene-HMPREF1039_1316;Name=HMPREF1039_1316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1316
AFIJ01000018.1	Genbank	CDS	13141	13770	.	+	0	ID=cds-EGL41063.1;Parent=gene-HMPREF1039_1316;Dbxref=NCBI_GP:EGL41063.1;Name=EGL41063.1;Note=identified by match to protein family HMM PF01865;gbkey=CDS;locus_tag=HMPREF1039_1316;product=hypothetical protein;protein_id=EGL41063.1;transl_table=11
AFIJ01000018.1	Genbank	gene	13763	14752	.	+	.	ID=gene-HMPREF1039_1317;Name=HMPREF1039_1317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1317
AFIJ01000018.1	Genbank	CDS	13763	14752	.	+	0	ID=cds-EGL41032.1;Parent=gene-HMPREF1039_1317;Dbxref=NCBI_GP:EGL41032.1;Name=EGL41032.1;Note=identified by match to protein family HMM PF01384;gbkey=CDS;locus_tag=HMPREF1039_1317;product=phosphate transporter family protein;protein_id=EGL41032.1;transl_table=11
AFIJ01000018.1	Genbank	gene	14886	15761	.	-	.	ID=gene-HMPREF1039_1318;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1318
AFIJ01000018.1	Genbank	CDS	14886	15761	.	-	0	ID=cds-EGL41066.1;Parent=gene-HMPREF1039_1318;Dbxref=NCBI_GP:EGL41066.1;Name=EGL41066.1;Note=identified by match to protein family HMM PF01259%3B match to protein family HMM TIGR00081;gbkey=CDS;gene=purC;locus_tag=HMPREF1039_1318;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=EGL41066.1;transl_table=11
AFIJ01000018.1	Genbank	gene	16061	16477	.	+	.	ID=gene-HMPREF1039_1319;Name=HMPREF1039_1319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1319
AFIJ01000018.1	Genbank	CDS	16061	16477	.	+	0	ID=cds-EGL41048.1;Parent=gene-HMPREF1039_1319;Dbxref=NCBI_GP:EGL41048.1;Name=EGL41048.1;Note=identified by match to protein family HMM PF03061%3B match to protein family HMM TIGR00051;gbkey=CDS;locus_tag=HMPREF1039_1319;product=acyl-CoA thioester hydrolase%2C YbgC/YbaW family;protein_id=EGL41048.1;transl_table=11
AFIJ01000018.1	Genbank	gene	16490	17293	.	+	.	ID=gene-HMPREF1039_1320;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=HMPREF1039_1320
AFIJ01000018.1	Genbank	CDS	16490	17293	.	+	0	ID=cds-EGL41070.1;Parent=gene-HMPREF1039_1320;Dbxref=NCBI_GP:EGL41070.1;Name=EGL41070.1;Note=identified by match to protein family HMM PF01177%3B match to protein family HMM TIGR00067;gbkey=CDS;gene=murI;locus_tag=HMPREF1039_1320;product=glutamate racemase;protein_id=EGL41070.1;transl_table=11
AFIJ01000018.1	Genbank	gene	17332	17874	.	+	.	ID=gene-HMPREF1039_1321;Name=HMPREF1039_1321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1321
AFIJ01000018.1	Genbank	CDS	17332	17874	.	+	0	ID=cds-EGL41057.1;Parent=gene-HMPREF1039_1321;Dbxref=NCBI_GP:EGL41057.1;Name=EGL41057.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1321;product=hypothetical protein;protein_id=EGL41057.1;transl_table=11
AFIJ01000018.1	Genbank	gene	17889	18545	.	+	.	ID=gene-HMPREF1039_1322;Name=HMPREF1039_1322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1322
AFIJ01000018.1	Genbank	CDS	17889	18545	.	+	0	ID=cds-EGL41028.1;Parent=gene-HMPREF1039_1322;Dbxref=NCBI_GP:EGL41028.1;Name=EGL41028.1;gbkey=CDS;locus_tag=HMPREF1039_1322;product=hypothetical protein;protein_id=EGL41028.1;transl_table=11
AFIJ01000018.1	Genbank	gene	18556	19143	.	+	.	ID=gene-HMPREF1039_1323;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1323
AFIJ01000018.1	Genbank	CDS	18556	19143	.	+	0	ID=cds-EGL41045.1;Parent=gene-HMPREF1039_1323;Dbxref=NCBI_GP:EGL41045.1;Name=EGL41045.1;Note=identified by match to protein family HMM PF01725%3B match to protein family HMM TIGR00042;gbkey=CDS;gene=rdgB;locus_tag=HMPREF1039_1323;product=non-canonical purine NTP pyrophosphatase%2C RdgB/HAM1 family;protein_id=EGL41045.1;transl_table=11
AFIJ01000018.1	Genbank	gene	19342	20118	.	+	.	ID=gene-HMPREF1039_1324;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1324
AFIJ01000018.1	Genbank	CDS	19342	20118	.	+	0	ID=cds-EGL41043.1;Parent=gene-HMPREF1039_1324;Dbxref=NCBI_GP:EGL41043.1;Name=EGL41043.1;Note=identified by match to protein family HMM PF02675%3B match to protein family HMM TIGR03331;gbkey=CDS;gene=speD;locus_tag=HMPREF1039_1324;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=EGL41043.1;transl_table=11
AFIJ01000018.1	Genbank	gene	20163	20795	.	+	.	ID=gene-HMPREF1039_1325;Name=HMPREF1039_1325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1325
AFIJ01000018.1	Genbank	CDS	20163	20795	.	+	0	ID=cds-EGL41038.1;Parent=gene-HMPREF1039_1325;Dbxref=NCBI_GP:EGL41038.1;Name=EGL41038.1;Note=identified by match to protein family HMM PF00596;gbkey=CDS;locus_tag=HMPREF1039_1325;product=putative L-ribulose-5-phosphate 4-epimerase;protein_id=EGL41038.1;transl_table=11
AFIJ01000018.1	Genbank	gene	20820	21095	.	+	.	ID=gene-HMPREF1039_1326;Name=HMPREF1039_1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1326
AFIJ01000018.1	Genbank	CDS	20820	21095	.	+	0	ID=cds-EGL41073.1;Parent=gene-HMPREF1039_1326;Dbxref=NCBI_GP:EGL41073.1;Name=EGL41073.1;gbkey=CDS;locus_tag=HMPREF1039_1326;product=hypothetical protein;protein_id=EGL41073.1;transl_table=11
AFIJ01000018.1	Genbank	gene	21202	22734	.	-	.	ID=gene-HMPREF1039_1327;Name=HMPREF1039_1327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1327
AFIJ01000018.1	Genbank	CDS	21202	22734	.	-	0	ID=cds-EGL41052.1;Parent=gene-HMPREF1039_1327;Dbxref=NCBI_GP:EGL41052.1;Name=EGL41052.1;Note=identified by match to protein family HMM PF02541;gbkey=CDS;locus_tag=HMPREF1039_1327;product=putative exopolyphosphatase;protein_id=EGL41052.1;transl_table=11
AFIJ01000018.1	Genbank	gene	22981	23559	.	+	.	ID=gene-HMPREF1039_1328;Name=HMPREF1039_1328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1328
AFIJ01000018.1	Genbank	CDS	22981	23559	.	+	0	ID=cds-EGL41056.1;Parent=gene-HMPREF1039_1328;Dbxref=NCBI_GP:EGL41056.1;Name=EGL41056.1;gbkey=CDS;locus_tag=HMPREF1039_1328;product=hypothetical protein;protein_id=EGL41056.1;transl_table=11
AFIJ01000018.1	Genbank	gene	23683	24651	.	+	.	ID=gene-HMPREF1039_1329;Name=HMPREF1039_1329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1329
AFIJ01000018.1	Genbank	CDS	23683	24651	.	+	0	ID=cds-EGL41035.1;Parent=gene-HMPREF1039_1329;Dbxref=NCBI_GP:EGL41035.1;Name=EGL41035.1;gbkey=CDS;locus_tag=HMPREF1039_1329;product=hypothetical protein;protein_id=EGL41035.1;transl_table=11
AFIJ01000018.1	Genbank	gene	25148	25855	.	-	.	ID=gene-HMPREF1039_1330;Name=HMPREF1039_1330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1330
AFIJ01000018.1	Genbank	CDS	25148	25855	.	-	0	ID=cds-EGL41053.1;Parent=gene-HMPREF1039_1330;Dbxref=NCBI_GP:EGL41053.1;Name=EGL41053.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01709%3B match to protein family HMM TIGR01033;gbkey=CDS;locus_tag=HMPREF1039_1330;product=DNA-binding regulatory protein%2C YebC/PmpR family;protein_id=EGL41053.1;transl_table=11
AFIJ01000018.1	Genbank	gene	25887	26459	.	-	.	ID=gene-HMPREF1039_1331;Name=HMPREF1039_1331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1331
AFIJ01000018.1	Genbank	CDS	25887	26459	.	-	0	ID=cds-EGL41034.1;Parent=gene-HMPREF1039_1331;Dbxref=NCBI_GP:EGL41034.1;Name=EGL41034.1;gbkey=CDS;locus_tag=HMPREF1039_1331;product=hypothetical protein;protein_id=EGL41034.1;transl_table=11
AFIJ01000018.1	Genbank	gene	26462	27193	.	-	.	ID=gene-HMPREF1039_1332;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1332
AFIJ01000018.1	Genbank	CDS	26462	27193	.	-	0	ID=cds-EGL41065.1;Parent=gene-HMPREF1039_1332;Dbxref=NCBI_GP:EGL41065.1;Name=EGL41065.1;Note=identified by match to protein family HMM PF01746%3B match to protein family HMM TIGR00088;gbkey=CDS;gene=trmD;locus_tag=HMPREF1039_1332;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=EGL41065.1;transl_table=11
AFIJ01000018.1	Genbank	gene	27190	27693	.	-	.	ID=gene-HMPREF1039_1333;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=HMPREF1039_1333
AFIJ01000018.1	Genbank	CDS	27190	27693	.	-	0	ID=cds-EGL41047.1;Parent=gene-HMPREF1039_1333;Dbxref=NCBI_GP:EGL41047.1;Name=EGL41047.1;Note=identified by match to protein family HMM PF01782%3B match to protein family HMM PF05239%3B match to protein family HMM TIGR02273;gbkey=CDS;gene=rimM;locus_tag=HMPREF1039_1333;product=16S rRNA processing protein RimM;protein_id=EGL41047.1;transl_table=11
AFIJ01000018.1	Genbank	gene	27698	28105	.	-	.	ID=gene-HMPREF1039_1334;Name=HMPREF1039_1334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1334
AFIJ01000018.1	Genbank	CDS	27698	28105	.	-	0	ID=cds-EGL41059.1;Parent=gene-HMPREF1039_1334;Dbxref=NCBI_GP:EGL41059.1;Name=EGL41059.1;gbkey=CDS;locus_tag=HMPREF1039_1334;product=hypothetical protein;protein_id=EGL41059.1;transl_table=11
AFIJ01000018.1	Genbank	gene	28114	28341	.	-	.	ID=gene-HMPREF1039_1335;Name=HMPREF1039_1335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1335
AFIJ01000018.1	Genbank	CDS	28114	28341	.	-	0	ID=cds-EGL41031.1;Parent=gene-HMPREF1039_1335;Dbxref=NCBI_GP:EGL41031.1;Name=EGL41031.1;gbkey=CDS;locus_tag=HMPREF1039_1335;product=hypothetical protein;protein_id=EGL41031.1;transl_table=11
AFIJ01000018.1	Genbank	gene	28355	28624	.	-	.	ID=gene-HMPREF1039_1336;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF1039_1336
AFIJ01000018.1	Genbank	CDS	28355	28624	.	-	0	ID=cds-EGL41050.1;Parent=gene-HMPREF1039_1336;Dbxref=NCBI_GP:EGL41050.1;Name=EGL41050.1;Note=identified by match to protein family HMM PF00886%3B match to protein family HMM TIGR00002;gbkey=CDS;gene=rpsP;locus_tag=HMPREF1039_1336;product=ribosomal protein S16;protein_id=EGL41050.1;transl_table=11
AFIJ01000018.1	Genbank	gene	28661	30016	.	-	.	ID=gene-HMPREF1039_1337;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=HMPREF1039_1337
AFIJ01000018.1	Genbank	CDS	28661	30016	.	-	0	ID=cds-EGL41051.1;Parent=gene-HMPREF1039_1337;Dbxref=NCBI_GP:EGL41051.1;Name=EGL41051.1;Note=identified by match to protein family HMM PF00448%3B match to protein family HMM PF02881%3B match to protein family HMM PF02978%3B match to protein family HMM TIGR00959;gbkey=CDS;gene=ffh;locus_tag=HMPREF1039_1337;product=signal recognition particle protein;protein_id=EGL41051.1;transl_table=11
AFIJ01000018.1	Genbank	gene	30107	30352	.	-	.	ID=gene-HMPREF1039_1338;Name=HMPREF1039_1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1338
AFIJ01000018.1	Genbank	CDS	30107	30352	.	-	0	ID=cds-EGL41062.1;Parent=gene-HMPREF1039_1338;Dbxref=NCBI_GP:EGL41062.1;Name=EGL41062.1;Note=identified by match to protein family HMM PF04297%3B match to protein family HMM PF04545%3B match to protein family HMM PF08281;gbkey=CDS;locus_tag=HMPREF1039_1338;product=helix-turn-helix protein%2C YlxM/p13 family;protein_id=EGL41062.1;transl_table=11
AFIJ01000018.1	Genbank	gene	30427	31062	.	-	.	ID=gene-HMPREF1039_1339;Name=cobH;gbkey=Gene;gene=cobH;gene_biotype=protein_coding;locus_tag=HMPREF1039_1339
AFIJ01000018.1	Genbank	CDS	30427	31062	.	-	0	ID=cds-EGL41040.1;Parent=gene-HMPREF1039_1339;Dbxref=NCBI_GP:EGL41040.1;Name=EGL41040.1;Note=identified by match to protein family HMM PF02570;gbkey=CDS;gene=cobH;locus_tag=HMPREF1039_1339;product=precorrin-8X methylmutase;protein_id=EGL41040.1;transl_table=11
AFIJ01000018.1	Genbank	gene	31059	32444	.	-	.	ID=gene-HMPREF1039_1340;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1340
AFIJ01000018.1	Genbank	CDS	31059	32444	.	-	0	ID=cds-EGL41044.1;Parent=gene-HMPREF1039_1340;Dbxref=NCBI_GP:EGL41044.1;Name=EGL41044.1;Note=identified by match to protein family HMM PF01656%3B match to protein family HMM PF07685%3B match to protein family HMM TIGR00379;gbkey=CDS;gene=cobB;locus_tag=HMPREF1039_1340;product=cobyrinic acid a%2Cc-diamide synthase;protein_id=EGL41044.1;transl_table=11
AFIJ01000018.1	Genbank	gene	32431	33651	.	-	.	ID=gene-HMPREF1039_1341;Name=cbiT;gbkey=Gene;gene=cbiT;gene_biotype=protein_coding;locus_tag=HMPREF1039_1341
AFIJ01000018.1	Genbank	CDS	32431	33651	.	-	0	ID=cds-EGL41025.1;Parent=gene-HMPREF1039_1341;Dbxref=NCBI_GP:EGL41025.1;Name=EGL41025.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR02467%3B match to protein family HMM TIGR02469;gbkey=CDS;gene=cbiT;locus_tag=HMPREF1039_1341;product=precorrin-6Y C5%2C15-methyltransferase (decarboxylating)%2C CbiT subunit;protein_id=EGL41025.1;transl_table=11
AFIJ01000018.1	Genbank	gene	33648	34415	.	-	.	ID=gene-HMPREF1039_1342;Name=cobK;gbkey=Gene;gene=cobK;gene_biotype=protein_coding;locus_tag=HMPREF1039_1342
AFIJ01000018.1	Genbank	CDS	33648	34415	.	-	0	ID=cds-EGL41071.1;Parent=gene-HMPREF1039_1342;Dbxref=NCBI_GP:EGL41071.1;Name=EGL41071.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02571%3B match to protein family HMM TIGR00715;gbkey=CDS;gene=cobK;locus_tag=HMPREF1039_1342;product=precorrin-6A reductase;protein_id=EGL41071.1;transl_table=11
AFIJ01000018.1	Genbank	gene	34412	35158	.	-	.	ID=gene-HMPREF1039_1343;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_1343
AFIJ01000018.1	Genbank	CDS	34412	35158	.	-	0	ID=cds-EGL41039.1;Parent=gene-HMPREF1039_1343;Dbxref=NCBI_GP:EGL41039.1;Name=EGL41039.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01466;gbkey=CDS;gene=cobJ;locus_tag=HMPREF1039_1343;product=precorrin-3B C(17)-methyltransferase;protein_id=EGL41039.1;transl_table=11
AFIJ01000018.1	Genbank	gene	35155	36222	.	-	.	ID=gene-HMPREF1039_1344;Name=HMPREF1039_1344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1344
AFIJ01000018.1	Genbank	CDS	35155	36222	.	-	0	ID=cds-EGL41026.1;Parent=gene-HMPREF1039_1344;Dbxref=NCBI_GP:EGL41026.1;Name=EGL41026.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01890;gbkey=CDS;locus_tag=HMPREF1039_1344;product=CbiG;protein_id=EGL41026.1;transl_table=11
AFIJ01000018.1	Genbank	gene	36215	37015	.	-	.	ID=gene-HMPREF1039_1345;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=HMPREF1039_1345
AFIJ01000018.1	Genbank	CDS	36215	37015	.	-	0	ID=cds-EGL41069.1;Parent=gene-HMPREF1039_1345;Dbxref=NCBI_GP:EGL41069.1;Name=EGL41069.1;Note=identified by match to protein family HMM PF00590%3B match to protein family HMM TIGR01465;gbkey=CDS;gene=cobM;locus_tag=HMPREF1039_1345;product=precorrin-4 C(11)-methyltransferase;protein_id=EGL41069.1;transl_table=11
AFIJ01000018.1	Genbank	gene	37106	37897	.	-	.	ID=gene-HMPREF1039_1346;Name=HMPREF1039_1346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1346
AFIJ01000018.1	Genbank	CDS	37106	37897	.	-	0	ID=cds-EGL41042.1;Parent=gene-HMPREF1039_1346;Dbxref=NCBI_GP:EGL41042.1;Name=EGL41042.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_1346;product=ABC transporter%2C ATP-binding protein;protein_id=EGL41042.1;transl_table=11
AFIJ01000018.1	Genbank	gene	37900	38910	.	-	.	ID=gene-HMPREF1039_1347;Name=HMPREF1039_1347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1347
AFIJ01000018.1	Genbank	CDS	37900	38910	.	-	0	ID=cds-EGL41049.1;Parent=gene-HMPREF1039_1347;Dbxref=NCBI_GP:EGL41049.1;Name=EGL41049.1;Note=identified by match to protein family HMM PF01032;gbkey=CDS;locus_tag=HMPREF1039_1347;product=iron chelate uptake ABC transporter%2C FeCT family%2C permease protein;protein_id=EGL41049.1;transl_table=11
AFIJ01000018.1	Genbank	gene	38897	39883	.	-	.	ID=gene-HMPREF1039_1348;Name=HMPREF1039_1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1348
AFIJ01000018.1	Genbank	CDS	38897	39883	.	-	0	ID=cds-EGL41074.1;Parent=gene-HMPREF1039_1348;Dbxref=NCBI_GP:EGL41074.1;Name=EGL41074.1;Note=identified by match to protein family HMM PF01497;gbkey=CDS;locus_tag=HMPREF1039_1348;product=periplasmic binding protein;protein_id=EGL41074.1;transl_table=11
AFIJ01000018.1	Genbank	gene	39915	40100	.	-	.	ID=gene-HMPREF1039_1349;Name=HMPREF1039_1349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1349
AFIJ01000018.1	Genbank	CDS	39915	40100	.	-	0	ID=cds-EGL41068.1;Parent=gene-HMPREF1039_1349;Dbxref=NCBI_GP:EGL41068.1;Name=EGL41068.1;gbkey=CDS;locus_tag=HMPREF1039_1349;product=hypothetical protein;protein_id=EGL41068.1;transl_table=11
AFIJ01000018.1	Genbank	gene	40190	40945	.	-	.	ID=gene-HMPREF1039_1350;Name=HMPREF1039_1350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1350
AFIJ01000018.1	Genbank	CDS	40190	40945	.	-	0	ID=cds-EGL41058.1;Parent=gene-HMPREF1039_1350;Dbxref=NCBI_GP:EGL41058.1;Name=EGL41058.1;Note=identified by match to protein family HMM PF00899%3B match to protein family HMM PF05237;gbkey=CDS;locus_tag=HMPREF1039_1350;product=ThiF family protein;protein_id=EGL41058.1;transl_table=11
AFIJ01000018.1	Genbank	gene	41145	41219	.	+	.	ID=gene-HMPREF1039_1351;Name=HMPREF1039_1351;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1351
AFIJ01000018.1	Genbank	tRNA	41145	41219	.	+	.	ID=rna-HMPREF1039_1351;Parent=gene-HMPREF1039_1351;gbkey=tRNA;locus_tag=HMPREF1039_1351;product=tRNA-Arg
AFIJ01000018.1	Genbank	exon	41145	41219	.	+	.	ID=exon-HMPREF1039_1351-1;Parent=rna-HMPREF1039_1351;gbkey=tRNA;locus_tag=HMPREF1039_1351;product=tRNA-Arg
AFIJ01000018.1	Genbank	gene	41348	41737	.	-	.	ID=gene-HMPREF1039_1352;Name=HMPREF1039_1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1352
AFIJ01000018.1	Genbank	CDS	41348	41737	.	-	0	ID=cds-EGL41041.1;Parent=gene-HMPREF1039_1352;Dbxref=NCBI_GP:EGL41041.1;Name=EGL41041.1;Note=identified by match to protein family HMM PF01381;gbkey=CDS;locus_tag=HMPREF1039_1352;product=DNA-binding helix-turn-helix protein;protein_id=EGL41041.1;transl_table=11
AFIJ01000018.1	Genbank	gene	42021	42155	.	+	.	ID=gene-HMPREF1039_1353;Name=HMPREF1039_1353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1353
AFIJ01000018.1	Genbank	CDS	42021	42155	.	+	0	ID=cds-EGL41061.1;Parent=gene-HMPREF1039_1353;Dbxref=NCBI_GP:EGL41061.1;Name=EGL41061.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1353;product=hypothetical protein;protein_id=EGL41061.1;transl_table=11
AFIJ01000018.1	Genbank	gene	42185	42679	.	+	.	ID=gene-HMPREF1039_1354;Name=HMPREF1039_1354;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1354
AFIJ01000018.1	Genbank	CDS	42185	42679	.	+	0	ID=cds-EGL41060.1;Parent=gene-HMPREF1039_1354;Dbxref=NCBI_GP:EGL41060.1;Name=EGL41060.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1354;product=hypothetical protein;protein_id=EGL41060.1;transl_table=11
AFIJ01000018.1	Genbank	gene	42708	43313	.	+	.	ID=gene-HMPREF1039_1355;Name=HMPREF1039_1355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1355
AFIJ01000018.1	Genbank	CDS	42708	43313	.	+	0	ID=cds-EGL41054.1;Parent=gene-HMPREF1039_1355;Dbxref=NCBI_GP:EGL41054.1;Name=EGL41054.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01966;gbkey=CDS;locus_tag=HMPREF1039_1355;product=HD domain protein;protein_id=EGL41054.1;transl_table=11
##sequence-region AFIJ01000017.1 1 21892
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000017.1	Genbank	region	1	21892	.	+	.	ID=AFIJ01000017.1:1..21892;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000017.1	Genbank	gene	35	724	.	-	.	ID=gene-HMPREF1039_1521;Name=HMPREF1039_1521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1521
AFIJ01000017.1	Genbank	CDS	35	724	.	-	0	ID=cds-EGL41141.1;Parent=gene-HMPREF1039_1521;Dbxref=NCBI_GP:EGL41141.1;Name=EGL41141.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00702;gbkey=CDS;locus_tag=HMPREF1039_1521;product=haloacid dehalogenase-like hydrolase;protein_id=EGL41141.1;transl_table=11
AFIJ01000017.1	Genbank	gene	758	1957	.	-	.	ID=gene-HMPREF1039_1522;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1522
AFIJ01000017.1	Genbank	CDS	758	1957	.	-	0	ID=cds-EGL41151.1;Parent=gene-HMPREF1039_1522;Dbxref=NCBI_GP:EGL41151.1;Name=EGL41151.1;Note=identified by match to protein family HMM PF00871%3B match to protein family HMM TIGR00016;gbkey=CDS;gene=ackA;locus_tag=HMPREF1039_1522;product=acetate kinase;protein_id=EGL41151.1;transl_table=11
AFIJ01000017.1	Genbank	gene	1987	2523	.	-	.	ID=gene-HMPREF1039_1523;Name=HMPREF1039_1523;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1523
AFIJ01000017.1	Genbank	CDS	1987	2523	.	-	0	ID=cds-EGL41146.1;Parent=gene-HMPREF1039_1523;Dbxref=NCBI_GP:EGL41146.1;Name=EGL41146.1;gbkey=CDS;locus_tag=HMPREF1039_1523;product=hypothetical protein;protein_id=EGL41146.1;transl_table=11
AFIJ01000017.1	Genbank	gene	2718	3917	.	+	.	ID=gene-HMPREF1039_1524;Name=HMPREF1039_1524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1524
AFIJ01000017.1	Genbank	CDS	2718	3917	.	+	0	ID=cds-EGL41145.1;Parent=gene-HMPREF1039_1524;Dbxref=NCBI_GP:EGL41145.1;Name=EGL41145.1;Note=identified by match to protein family HMM PF05636;gbkey=CDS;locus_tag=HMPREF1039_1524;product=hypothetical protein;protein_id=EGL41145.1;transl_table=11
AFIJ01000017.1	Genbank	gene	4054	5316	.	+	.	ID=gene-HMPREF1039_1525;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1525
AFIJ01000017.1	Genbank	CDS	4054	5316	.	+	0	ID=cds-EGL41134.1;Parent=gene-HMPREF1039_1525;Dbxref=NCBI_GP:EGL41134.1;Name=EGL41134.1;Note=identified by match to protein family HMM PF03616%3B match to protein family HMM TIGR00210;gbkey=CDS;gene=gltS;locus_tag=HMPREF1039_1525;product=sodium/glutamate symporter;protein_id=EGL41134.1;transl_table=11
AFIJ01000017.1	Genbank	gene	5504	6718	.	-	.	ID=gene-HMPREF1039_1526;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=HMPREF1039_1526
AFIJ01000017.1	Genbank	CDS	5504	6718	.	-	0	ID=cds-EGL41143.1;Parent=gene-HMPREF1039_1526;Dbxref=NCBI_GP:EGL41143.1;Name=EGL41143.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02503%3B match to protein family HMM TIGR03705;gbkey=CDS;gene=ppk1;locus_tag=HMPREF1039_1526;product=polyphosphate kinase 1;protein_id=EGL41143.1;transl_table=11
AFIJ01000017.1	Genbank	gene	6789	7598	.	-	.	ID=gene-HMPREF1039_1527;Name=ppk;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;locus_tag=HMPREF1039_1527
AFIJ01000017.1	Genbank	CDS	6789	7598	.	-	0	ID=cds-EGL41148.1;Parent=gene-HMPREF1039_1527;Dbxref=NCBI_GP:EGL41148.1;Name=EGL41148.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02503;gbkey=CDS;gene=ppk;locus_tag=HMPREF1039_1527;product=putative polyphosphate kinase 1;protein_id=EGL41148.1;transl_table=11
AFIJ01000017.1	Genbank	gene	7602	9143	.	-	.	ID=gene-HMPREF1039_1528;Name=HMPREF1039_1528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1528
AFIJ01000017.1	Genbank	CDS	7602	9143	.	-	0	ID=cds-EGL41139.1;Parent=gene-HMPREF1039_1528;Dbxref=NCBI_GP:EGL41139.1;Name=EGL41139.1;gbkey=CDS;locus_tag=HMPREF1039_1528;product=hypothetical protein;protein_id=EGL41139.1;transl_table=11
AFIJ01000017.1	Genbank	gene	9316	10194	.	-	.	ID=gene-HMPREF1039_1529;Name=HMPREF1039_1529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1529
AFIJ01000017.1	Genbank	CDS	9316	10194	.	-	0	ID=cds-EGL41149.1;Parent=gene-HMPREF1039_1529;Dbxref=NCBI_GP:EGL41149.1;Name=EGL41149.1;gbkey=CDS;locus_tag=HMPREF1039_1529;product=hypothetical protein;protein_id=EGL41149.1;transl_table=11
AFIJ01000017.1	Genbank	gene	10197	10574	.	-	.	ID=gene-HMPREF1039_1530;Name=HMPREF1039_1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1530
AFIJ01000017.1	Genbank	CDS	10197	10574	.	-	0	ID=cds-EGL41136.1;Parent=gene-HMPREF1039_1530;Dbxref=NCBI_GP:EGL41136.1;Name=EGL41136.1;Note=identified by match to protein family HMM PF02410%3B match to protein family HMM TIGR00090;gbkey=CDS;locus_tag=HMPREF1039_1530;product=iojap-like protein;protein_id=EGL41136.1;transl_table=11
AFIJ01000017.1	Genbank	gene	10589	11743	.	-	.	ID=gene-HMPREF1039_1531;Name=HMPREF1039_1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1531
AFIJ01000017.1	Genbank	CDS	10589	11743	.	-	0	ID=cds-EGL41144.1;Parent=gene-HMPREF1039_1531;Dbxref=NCBI_GP:EGL41144.1;Name=EGL41144.1;gbkey=CDS;locus_tag=HMPREF1039_1531;product=hypothetical protein;protein_id=EGL41144.1;transl_table=11
AFIJ01000017.1	Genbank	gene	11740	12345	.	-	.	ID=gene-HMPREF1039_1532;Name=HMPREF1039_1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1532
AFIJ01000017.1	Genbank	CDS	11740	12345	.	-	0	ID=cds-EGL41142.1;Parent=gene-HMPREF1039_1532;Dbxref=NCBI_GP:EGL41142.1;Name=EGL41142.1;Note=identified by match to protein family HMM PF01966%3B match to protein family HMM TIGR00488;gbkey=CDS;locus_tag=HMPREF1039_1532;product=hydrolase%2C HD family;protein_id=EGL41142.1;transl_table=11
AFIJ01000017.1	Genbank	gene	12321	12944	.	-	.	ID=gene-HMPREF1039_1533;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1533
AFIJ01000017.1	Genbank	CDS	12321	12944	.	-	0	ID=cds-EGL41137.1;Parent=gene-HMPREF1039_1533;Dbxref=NCBI_GP:EGL41137.1;Name=EGL41137.1;Note=identified by match to protein family HMM PF01467%3B match to protein family HMM TIGR00125%3B match to protein family HMM TIGR00482;gbkey=CDS;gene=nadD;locus_tag=HMPREF1039_1533;product=nicotinate-nucleotide adenylyltransferase;protein_id=EGL41137.1;transl_table=11
AFIJ01000017.1	Genbank	gene	12931	13092	.	-	.	ID=gene-HMPREF1039_1534;Name=HMPREF1039_1534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1534
AFIJ01000017.1	Genbank	CDS	12931	13092	.	-	0	ID=cds-EGL41140.1;Parent=gene-HMPREF1039_1534;Dbxref=NCBI_GP:EGL41140.1;Name=EGL41140.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1534;product=hypothetical protein;protein_id=EGL41140.1;transl_table=11
AFIJ01000017.1	Genbank	gene	13089	14336	.	-	.	ID=gene-HMPREF1039_1535;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1535
AFIJ01000017.1	Genbank	CDS	13089	14336	.	-	0	ID=cds-EGL41133.1;Parent=gene-HMPREF1039_1535;Dbxref=NCBI_GP:EGL41133.1;Name=EGL41133.1;Note=identified by match to protein family HMM TIGR00407;gbkey=CDS;gene=proA;locus_tag=HMPREF1039_1535;product=glutamate-5-semialdehyde dehydrogenase;protein_id=EGL41133.1;transl_table=11
AFIJ01000017.1	Genbank	gene	14351	15481	.	-	.	ID=gene-HMPREF1039_1536;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1536
AFIJ01000017.1	Genbank	CDS	14351	15481	.	-	0	ID=cds-EGL41150.1;Parent=gene-HMPREF1039_1536;Dbxref=NCBI_GP:EGL41150.1;Name=EGL41150.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM PF01472%3B match to protein family HMM TIGR01027;gbkey=CDS;gene=proB;locus_tag=HMPREF1039_1536;product=glutamate 5-kinase;protein_id=EGL41150.1;transl_table=11
AFIJ01000017.1	Genbank	gene	15494	15787	.	-	.	ID=gene-HMPREF1039_1537;Name=HMPREF1039_1537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1537
AFIJ01000017.1	Genbank	CDS	15494	15787	.	-	0	ID=cds-EGL41135.1;Parent=gene-HMPREF1039_1537;Dbxref=NCBI_GP:EGL41135.1;Name=EGL41135.1;Note=identified by match to protein family HMM PF01985;gbkey=CDS;locus_tag=HMPREF1039_1537;product=putative RNA-binding protein%2C YhbY family;protein_id=EGL41135.1;transl_table=11
AFIJ01000017.1	Genbank	gene	15805	17079	.	-	.	ID=gene-HMPREF1039_1538;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1538
AFIJ01000017.1	Genbank	CDS	15805	17079	.	-	0	ID=cds-EGL41147.1;Parent=gene-HMPREF1039_1538;Dbxref=NCBI_GP:EGL41147.1;Name=EGL41147.1;Note=identified by match to protein family HMM PF01018%3B match to protein family HMM PF01926%3B match to protein family HMM PF09269%3B match to protein family HMM TIGR02729%3B match to protein family HMM TIGR03595;gbkey=CDS;gene=cgtA;locus_tag=HMPREF1039_1538;product=Obg family GTPase CgtA;protein_id=EGL41147.1;transl_table=11
AFIJ01000017.1	Genbank	gene	17328	21892	.	-	.	ID=gene-HMPREF1039_1539;Name=HMPREF1039_1539;end_range=21892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1539;partial=true
AFIJ01000017.1	Genbank	CDS	17328	21892	.	-	2	ID=cds-EGL41138.1;Parent=gene-HMPREF1039_1539;Dbxref=NCBI_GP:EGL41138.1;Name=EGL41138.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05662;end_range=21892,.;gbkey=CDS;locus_tag=HMPREF1039_1539;partial=true;product=peptidase propeptide and YPEB domain protein;protein_id=EGL41138.1;transl_table=11
##sequence-region AFIJ01000016.1 1 785
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000016.1	Genbank	region	1	785	.	+	.	ID=AFIJ01000016.1:1..785;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000016.1	Genbank	gene	233	589	.	-	.	ID=gene-HMPREF1039_1632;Name=HMPREF1039_1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1632
AFIJ01000016.1	Genbank	CDS	233	589	.	-	0	ID=cds-EGL41219.1;Parent=gene-HMPREF1039_1632;Dbxref=NCBI_GP:EGL41219.1;Name=EGL41219.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1632;product=hypothetical protein;protein_id=EGL41219.1;transl_table=11
##sequence-region AFIJ01000015.1 1 4417
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000015.1	Genbank	region	1	4417	.	+	.	ID=AFIJ01000015.1:1..4417;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000015.1	Genbank	gene	1	4417	.	-	.	ID=gene-HMPREF1039_1611;Name=HMPREF1039_1611;end_range=4417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1611;partial=true;start_range=.,1
AFIJ01000015.1	Genbank	CDS	1	4417	.	-	1	ID=cds-EGL41254.1;Parent=gene-HMPREF1039_1611;Dbxref=NCBI_GP:EGL41254.1;Name=EGL41254.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=4417,.;gbkey=CDS;locus_tag=HMPREF1039_1611;partial=true;product=hypothetical protein;protein_id=EGL41254.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000014.1 1 11574
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000014.1	Genbank	region	1	11574	.	+	.	ID=AFIJ01000014.1:1..11574;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000014.1	Genbank	gene	40	231	.	-	.	ID=gene-HMPREF1039_1586;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1586
AFIJ01000014.1	Genbank	CDS	40	231	.	-	0	ID=cds-EGL41315.1;Parent=gene-HMPREF1039_1586;Dbxref=NCBI_GP:EGL41315.1;Name=EGL41315.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00830%3B match to protein family HMM TIGR00009;gbkey=CDS;gene=rpmB;locus_tag=HMPREF1039_1586;product=ribosomal protein L28;protein_id=EGL41315.1;transl_table=11
AFIJ01000014.1	Genbank	gene	367	741	.	+	.	ID=gene-HMPREF1039_1587;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=HMPREF1039_1587
AFIJ01000014.1	Genbank	CDS	367	741	.	+	0	ID=cds-EGL41310.1;Parent=gene-HMPREF1039_1587;Dbxref=NCBI_GP:EGL41310.1;Name=EGL41310.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;gene=recG;locus_tag=HMPREF1039_1587;product=ATP-dependent DNA helicase RecG;protein_id=EGL41310.1;transl_table=11
AFIJ01000014.1	Genbank	gene	711	2402	.	+	.	ID=gene-HMPREF1039_1588;Name=HMPREF1039_1588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1588
AFIJ01000014.1	Genbank	CDS	711	2402	.	+	0	ID=cds-EGL41316.1;Parent=gene-HMPREF1039_1588;Dbxref=NCBI_GP:EGL41316.1;Name=EGL41316.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;locus_tag=HMPREF1039_1588;product=putative ATP-dependent DNA helicase RecG;protein_id=EGL41316.1;transl_table=11
AFIJ01000014.1	Genbank	gene	2522	3988	.	+	.	ID=gene-HMPREF1039_1589;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1589
AFIJ01000014.1	Genbank	CDS	2522	3988	.	+	0	ID=cds-EGL41314.1;Parent=gene-HMPREF1039_1589;Dbxref=NCBI_GP:EGL41314.1;Name=EGL41314.1;Note=identified by match to protein family HMM PF00478%3B match to protein family HMM PF00571%3B match to protein family HMM TIGR01302;gbkey=CDS;gene=guaB;locus_tag=HMPREF1039_1589;product=inosine-5'-monophosphate dehydrogenase;protein_id=EGL41314.1;transl_table=11
AFIJ01000014.1	Genbank	gene	4008	4739	.	+	.	ID=gene-HMPREF1039_1590;Name=HMPREF1039_1590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1590
AFIJ01000014.1	Genbank	CDS	4008	4739	.	+	0	ID=cds-EGL41313.1;Parent=gene-HMPREF1039_1590;Dbxref=NCBI_GP:EGL41313.1;Name=EGL41313.1;Note=identified by match to protein family HMM PF03808%3B match to protein family HMM TIGR00696;gbkey=CDS;locus_tag=HMPREF1039_1590;product=glycosyltransferase%2C WecB/TagA/CpsF family;protein_id=EGL41313.1;transl_table=11
AFIJ01000014.1	Genbank	gene	4749	5387	.	+	.	ID=gene-HMPREF1039_1591;Name=psd;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=HMPREF1039_1591
AFIJ01000014.1	Genbank	CDS	4749	5387	.	+	0	ID=cds-EGL41317.1;Parent=gene-HMPREF1039_1591;Dbxref=NCBI_GP:EGL41317.1;Name=EGL41317.1;Note=identified by match to protein family HMM PF02666%3B match to protein family HMM TIGR00164;gbkey=CDS;gene=psd;locus_tag=HMPREF1039_1591;product=phosphatidylserine decarboxylase;protein_id=EGL41317.1;transl_table=11
AFIJ01000014.1	Genbank	gene	5384	6067	.	+	.	ID=gene-HMPREF1039_1592;Name=HMPREF1039_1592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1592
AFIJ01000014.1	Genbank	CDS	5384	6067	.	+	0	ID=cds-EGL41319.1;Parent=gene-HMPREF1039_1592;Dbxref=NCBI_GP:EGL41319.1;Name=EGL41319.1;Note=identified by match to protein family HMM PF01066;gbkey=CDS;locus_tag=HMPREF1039_1592;product=putative CDP-diacylglycerol-serine O-phosphatidyltransferase;protein_id=EGL41319.1;transl_table=11
AFIJ01000014.1	Genbank	gene	6087	7334	.	+	.	ID=gene-HMPREF1039_1593;Name=HMPREF1039_1593;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1593
AFIJ01000014.1	Genbank	CDS	6087	7334	.	+	0	ID=cds-EGL41318.1;Parent=gene-HMPREF1039_1593;Dbxref=NCBI_GP:EGL41318.1;Name=EGL41318.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF1039_1593;product=glycosyltransferase%2C group 2 family protein;protein_id=EGL41318.1;transl_table=11
AFIJ01000014.1	Genbank	gene	7349	8125	.	+	.	ID=gene-HMPREF1039_1594;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1594
AFIJ01000014.1	Genbank	CDS	7349	8125	.	+	0	ID=cds-EGL41320.1;Parent=gene-HMPREF1039_1594;Dbxref=NCBI_GP:EGL41320.1;Name=EGL41320.1;Note=identified by match to protein family HMM PF01975%3B match to protein family HMM TIGR00087;gbkey=CDS;gene=surE;locus_tag=HMPREF1039_1594;product=5'/3'-nucleotidase SurE;protein_id=EGL41320.1;transl_table=11
AFIJ01000014.1	Genbank	binding_site	8166	8247	.	+	.	ID=id-AFIJ01000014.1:8166..8247;Note=Glycine riboswitch%3B Rfam score 33.56;bound_moiety=glycine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00504
AFIJ01000014.1	Genbank	binding_site	8243	8331	.	+	.	ID=id-AFIJ01000014.1:8243..8331;Note=Glycine riboswitch%3B Rfam score 56.07;bound_moiety=glycine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00504
AFIJ01000014.1	Genbank	gene	8421	9809	.	+	.	ID=gene-HMPREF1039_1597;Name=agcS;gbkey=Gene;gene=agcS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1597
AFIJ01000014.1	Genbank	CDS	8421	9809	.	+	0	ID=cds-EGL41312.1;Parent=gene-HMPREF1039_1597;Dbxref=NCBI_GP:EGL41312.1;Name=EGL41312.1;Note=identified by match to protein family HMM PF01235%3B match to protein family HMM TIGR00835;gbkey=CDS;gene=agcS;locus_tag=HMPREF1039_1597;product=amino acid carrier protein;protein_id=EGL41312.1;transl_table=11
AFIJ01000014.1	Genbank	gene	10039	11463	.	+	.	ID=gene-HMPREF1039_1598;Name=HMPREF1039_1598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1598
AFIJ01000014.1	Genbank	CDS	10039	11463	.	+	0	ID=cds-EGL41311.1;Parent=gene-HMPREF1039_1598;Dbxref=NCBI_GP:EGL41311.1;Name=EGL41311.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00171;gbkey=CDS;locus_tag=HMPREF1039_1598;product=aldehyde dehydrogenase (NAD) family protein;protein_id=EGL41311.1;transl_table=11
##sequence-region AFIJ01000013.1 1 6229
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000013.1	Genbank	region	1	6229	.	+	.	ID=AFIJ01000013.1:1..6229;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000013.1	Genbank	gene	65	727	.	-	.	ID=gene-HMPREF1039_1605;Name=HMPREF1039_1605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1605
AFIJ01000013.1	Genbank	CDS	65	727	.	-	0	ID=cds-EGL41370.1;Parent=gene-HMPREF1039_1605;Dbxref=NCBI_GP:EGL41370.1;Name=EGL41370.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_1605;product=comF family protein;protein_id=EGL41370.1;transl_table=11
AFIJ01000013.1	Genbank	gene	718	2883	.	-	.	ID=gene-HMPREF1039_1606;Name=HMPREF1039_1606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1606
AFIJ01000013.1	Genbank	CDS	718	2883	.	-	0	ID=cds-EGL41366.1;Parent=gene-HMPREF1039_1606;Dbxref=NCBI_GP:EGL41366.1;Name=EGL41366.1;Note=identified by match to protein family HMM TIGR01448;gbkey=CDS;locus_tag=HMPREF1039_1606;product=helicase%2C RecD/TraA family;protein_id=EGL41366.1;transl_table=11
AFIJ01000013.1	Genbank	gene	2868	3152	.	-	.	ID=gene-HMPREF1039_1607;Name=HMPREF1039_1607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1607
AFIJ01000013.1	Genbank	CDS	2868	3152	.	-	0	ID=cds-EGL41367.1;Parent=gene-HMPREF1039_1607;Dbxref=NCBI_GP:EGL41367.1;Name=EGL41367.1;Note=identified by match to protein family HMM PF01817%3B match to protein family HMM TIGR01805;gbkey=CDS;locus_tag=HMPREF1039_1607;product=chorismate mutase;protein_id=EGL41367.1;transl_table=11
AFIJ01000013.1	Genbank	gene	3350	4795	.	+	.	ID=gene-HMPREF1039_1608;Name=lysP;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=HMPREF1039_1608
AFIJ01000013.1	Genbank	CDS	3350	4795	.	+	0	ID=cds-EGL41368.1;Parent=gene-HMPREF1039_1608;Dbxref=NCBI_GP:EGL41368.1;Name=EGL41368.1;Note=identified by match to protein family HMM PF00324;gbkey=CDS;gene=lysP;locus_tag=HMPREF1039_1608;product=lysine-specific permease;protein_id=EGL41368.1;transl_table=11
AFIJ01000013.1	Genbank	gene	4874	5827	.	-	.	ID=gene-HMPREF1039_1609;Name=HMPREF1039_1609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1609
AFIJ01000013.1	Genbank	CDS	4874	5827	.	-	0	ID=cds-EGL41369.1;Parent=gene-HMPREF1039_1609;Dbxref=NCBI_GP:EGL41369.1;Name=EGL41369.1;Note=identified by match to protein family HMM PF00056%3B match to protein family HMM PF02866;gbkey=CDS;locus_tag=HMPREF1039_1609;product=putative L-lactate dehydrogenase;protein_id=EGL41369.1;transl_table=11
AFIJ01000013.1	Genbank	gene	6065	6148	.	+	.	ID=gene-HMPREF1039_1610;Name=HMPREF1039_1610;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1610
AFIJ01000013.1	Genbank	tRNA	6065	6148	.	+	.	ID=rna-HMPREF1039_1610;Parent=gene-HMPREF1039_1610;gbkey=tRNA;locus_tag=HMPREF1039_1610;product=tRNA-Leu
AFIJ01000013.1	Genbank	exon	6065	6148	.	+	.	ID=exon-HMPREF1039_1610-1;Parent=rna-HMPREF1039_1610;gbkey=tRNA;locus_tag=HMPREF1039_1610;product=tRNA-Leu
##sequence-region AFIJ01000012.1 1 517
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000012.1	Genbank	region	1	517	.	+	.	ID=AFIJ01000012.1:1..517;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000012.1	Genbank	gene	1	517	.	+	.	ID=gene-HMPREF1039_1636;Name=HMPREF1039_1636;end_range=517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1636;partial=true;start_range=.,1
AFIJ01000012.1	Genbank	CDS	1	517	.	+	2	ID=cds-EGL41406.1;Parent=gene-HMPREF1039_1636;Dbxref=NCBI_GP:EGL41406.1;Name=EGL41406.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05662;end_range=517,.;gbkey=CDS;locus_tag=HMPREF1039_1636;partial=true;product=hemagglutinin;protein_id=EGL41406.1;start_range=.,1;transl_table=11
##sequence-region AFIJ01000011.1 1 37253
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000011.1	Genbank	region	1	37253	.	+	.	ID=AFIJ01000011.1:1..37253;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000011.1	Genbank	gene	175	627	.	-	.	ID=gene-HMPREF1039_1405;Name=HMPREF1039_1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1405
AFIJ01000011.1	Genbank	CDS	175	627	.	-	0	ID=cds-EGL41446.1;Parent=gene-HMPREF1039_1405;Dbxref=NCBI_GP:EGL41446.1;Name=EGL41446.1;Note=identified by match to protein family HMM PF00258;gbkey=CDS;locus_tag=HMPREF1039_1405;product=flavodoxin;protein_id=EGL41446.1;transl_table=11
AFIJ01000011.1	Genbank	gene	807	1721	.	+	.	ID=gene-HMPREF1039_1406;Name=HMPREF1039_1406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1406
AFIJ01000011.1	Genbank	CDS	807	1721	.	+	0	ID=cds-EGL41431.1;Parent=gene-HMPREF1039_1406;Dbxref=NCBI_GP:EGL41431.1;Name=EGL41431.1;Note=identified by match to protein family HMM PF02558%3B match to protein family HMM PF08546%3B match to protein family HMM TIGR00745;gbkey=CDS;locus_tag=HMPREF1039_1406;product=2-dehydropantoate 2-reductase;protein_id=EGL41431.1;transl_table=11
AFIJ01000011.1	Genbank	gene	1731	2144	.	-	.	ID=gene-HMPREF1039_1407;Name=HMPREF1039_1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1407
AFIJ01000011.1	Genbank	CDS	1731	2144	.	-	0	ID=cds-EGL41427.1;Parent=gene-HMPREF1039_1407;Dbxref=NCBI_GP:EGL41427.1;Name=EGL41427.1;Note=identified by match to protein family HMM PF01575;gbkey=CDS;locus_tag=HMPREF1039_1407;product=MaoC-like protein;protein_id=EGL41427.1;transl_table=11
AFIJ01000011.1	Genbank	gene	2285	3430	.	-	.	ID=gene-HMPREF1039_1408;Name=HMPREF1039_1408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1408
AFIJ01000011.1	Genbank	CDS	2285	3430	.	-	0	ID=cds-EGL41455.1;Parent=gene-HMPREF1039_1408;Dbxref=NCBI_GP:EGL41455.1;Name=EGL41455.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;locus_tag=HMPREF1039_1408;product=butyryl-CoA dehydrogenase;protein_id=EGL41455.1;transl_table=11
AFIJ01000011.1	Genbank	gene	3569	4690	.	-	.	ID=gene-HMPREF1039_1409;Name=HMPREF1039_1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1409
AFIJ01000011.1	Genbank	CDS	3569	4690	.	-	0	ID=cds-EGL41452.1;Parent=gene-HMPREF1039_1409;Dbxref=NCBI_GP:EGL41452.1;Name=EGL41452.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;locus_tag=HMPREF1039_1409;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=EGL41452.1;transl_table=11
AFIJ01000011.1	Genbank	gene	4690	5976	.	-	.	ID=gene-HMPREF1039_1410;Name=hgdA;gbkey=Gene;gene=hgdA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1410
AFIJ01000011.1	Genbank	CDS	4690	5976	.	-	0	ID=cds-EGL41444.1;Parent=gene-HMPREF1039_1410;Dbxref=NCBI_GP:EGL41444.1;Name=EGL41444.1;Note=identified by match to protein family HMM PF06050;gbkey=CDS;gene=hgdA;locus_tag=HMPREF1039_1410;product=2-hydroxyglutaryl-CoA dehydratase%2C D-component;protein_id=EGL41444.1;transl_table=11
AFIJ01000011.1	Genbank	gene	5973	6773	.	-	.	ID=gene-HMPREF1039_1411;Name=hgdC;gbkey=Gene;gene=hgdC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1411
AFIJ01000011.1	Genbank	CDS	5973	6773	.	-	0	ID=cds-EGL41434.1;Parent=gene-HMPREF1039_1411;Dbxref=NCBI_GP:EGL41434.1;Name=EGL41434.1;Note=identified by match to protein family HMM PF01869%3B match to protein family HMM TIGR00241;gbkey=CDS;gene=hgdC;locus_tag=HMPREF1039_1411;product=putative benzoyl-CoA reductase%2C subunit D;protein_id=EGL41434.1;transl_table=11
AFIJ01000011.1	Genbank	gene	6813	7730	.	-	.	ID=gene-HMPREF1039_1412;Name=HMPREF1039_1412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1412
AFIJ01000011.1	Genbank	CDS	6813	7730	.	-	0	ID=cds-EGL41458.1;Parent=gene-HMPREF1039_1412;Dbxref=NCBI_GP:EGL41458.1;Name=EGL41458.1;gbkey=CDS;locus_tag=HMPREF1039_1412;product=glyoxalase family protein;protein_id=EGL41458.1;transl_table=11
AFIJ01000011.1	Genbank	gene	7771	9315	.	-	.	ID=gene-HMPREF1039_1413;Name=HMPREF1039_1413;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1413
AFIJ01000011.1	Genbank	CDS	7771	9315	.	-	0	ID=cds-EGL41462.1;Parent=gene-HMPREF1039_1413;Dbxref=NCBI_GP:EGL41462.1;Name=EGL41462.1;Note=identified by match to protein family HMM PF01144;gbkey=CDS;locus_tag=HMPREF1039_1413;product=CoA transferase;protein_id=EGL41462.1;transl_table=11
AFIJ01000011.1	Genbank	gene	10019	10762	.	+	.	ID=gene-HMPREF1039_1414;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1414
AFIJ01000011.1	Genbank	CDS	10019	10762	.	+	0	ID=cds-EGL41440.1;Parent=gene-HMPREF1039_1414;Dbxref=NCBI_GP:EGL41440.1;Name=EGL41440.1;Note=identified by match to protein family HMM PF01487%3B match to protein family HMM TIGR01093;gbkey=CDS;gene=aroD;locus_tag=HMPREF1039_1414;product=3-dehydroquinate dehydratase%2C type I;protein_id=EGL41440.1;transl_table=11
AFIJ01000011.1	Genbank	gene	10840	11295	.	-	.	ID=gene-HMPREF1039_1415;Name=HMPREF1039_1415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1415
AFIJ01000011.1	Genbank	CDS	10840	11295	.	-	0	ID=cds-EGL41437.1;Parent=gene-HMPREF1039_1415;Dbxref=NCBI_GP:EGL41437.1;Name=EGL41437.1;Note=identified by match to protein family HMM PF04463;gbkey=CDS;locus_tag=HMPREF1039_1415;product=hypothetical protein;protein_id=EGL41437.1;transl_table=11
AFIJ01000011.1	Genbank	gene	11423	13084	.	+	.	ID=gene-HMPREF1039_1416;Name=HMPREF1039_1416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1416
AFIJ01000011.1	Genbank	CDS	11423	13084	.	+	0	ID=cds-EGL41451.1;Parent=gene-HMPREF1039_1416;Dbxref=NCBI_GP:EGL41451.1;Name=EGL41451.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776;gbkey=CDS;locus_tag=HMPREF1039_1416;product=acetolactate synthase;protein_id=EGL41451.1;transl_table=11
AFIJ01000011.1	Genbank	gene	13136	13732	.	-	.	ID=gene-HMPREF1039_1417;Name=HMPREF1039_1417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1417
AFIJ01000011.1	Genbank	CDS	13136	13732	.	-	0	ID=cds-EGL41425.1;Parent=gene-HMPREF1039_1417;Dbxref=NCBI_GP:EGL41425.1;Name=EGL41425.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1417;product=hypothetical protein;protein_id=EGL41425.1;transl_table=11
AFIJ01000011.1	Genbank	gene	13864	14274	.	+	.	ID=gene-HMPREF1039_1418;Name=HMPREF1039_1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1418
AFIJ01000011.1	Genbank	CDS	13864	14274	.	+	0	ID=cds-EGL41436.1;Parent=gene-HMPREF1039_1418;Dbxref=NCBI_GP:EGL41436.1;Name=EGL41436.1;gbkey=CDS;locus_tag=HMPREF1039_1418;product=hypothetical protein;protein_id=EGL41436.1;transl_table=11
AFIJ01000011.1	Genbank	gene	14286	14681	.	+	.	ID=gene-HMPREF1039_1419;Name=HMPREF1039_1419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1419
AFIJ01000011.1	Genbank	CDS	14286	14681	.	+	0	ID=cds-EGL41457.1;Parent=gene-HMPREF1039_1419;Dbxref=NCBI_GP:EGL41457.1;Name=EGL41457.1;gbkey=CDS;locus_tag=HMPREF1039_1419;product=hypothetical protein;protein_id=EGL41457.1;transl_table=11
AFIJ01000011.1	Genbank	gene	14863	15288	.	-	.	ID=gene-HMPREF1039_1420;Name=gcdC;gbkey=Gene;gene=gcdC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1420
AFIJ01000011.1	Genbank	CDS	14863	15288	.	-	0	ID=cds-EGL41463.1;Parent=gene-HMPREF1039_1420;Dbxref=NCBI_GP:EGL41463.1;Name=EGL41463.1;Note=identified by match to protein family HMM PF00364;gbkey=CDS;gene=gcdC;locus_tag=HMPREF1039_1420;product=glutaconyl-CoA decarboxylase subunit gamma;protein_id=EGL41463.1;transl_table=11
AFIJ01000011.1	Genbank	gene	15320	15712	.	-	.	ID=gene-HMPREF1039_1421;Name=HMPREF1039_1421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1421
AFIJ01000011.1	Genbank	CDS	15320	15712	.	-	0	ID=cds-EGL41433.1;Parent=gene-HMPREF1039_1421;Dbxref=NCBI_GP:EGL41433.1;Name=EGL41433.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1421;product=hypothetical protein;protein_id=EGL41433.1;transl_table=11
AFIJ01000011.1	Genbank	gene	15731	17260	.	-	.	ID=gene-HMPREF1039_1422;Name=HMPREF1039_1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1422
AFIJ01000011.1	Genbank	CDS	15731	17260	.	-	0	ID=cds-EGL41435.1;Parent=gene-HMPREF1039_1422;Dbxref=NCBI_GP:EGL41435.1;Name=EGL41435.1;Note=identified by match to protein family HMM PF01039;gbkey=CDS;locus_tag=HMPREF1039_1422;product=carboxyl transferase domain protein;protein_id=EGL41435.1;transl_table=11
AFIJ01000011.1	Genbank	gene	17475	17563	.	-	.	ID=gene-HMPREF1039_1423;Name=HMPREF1039_1423;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1423
AFIJ01000011.1	Genbank	tRNA	17475	17563	.	-	.	ID=rna-HMPREF1039_1423;Parent=gene-HMPREF1039_1423;gbkey=tRNA;locus_tag=HMPREF1039_1423;product=tRNA-Ser
AFIJ01000011.1	Genbank	exon	17475	17563	.	-	.	ID=exon-HMPREF1039_1423-1;Parent=rna-HMPREF1039_1423;gbkey=tRNA;locus_tag=HMPREF1039_1423;product=tRNA-Ser
AFIJ01000011.1	Genbank	gene	17689	18435	.	-	.	ID=gene-HMPREF1039_1424;Name=HMPREF1039_1424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1424
AFIJ01000011.1	Genbank	CDS	17689	18435	.	-	0	ID=cds-EGL41459.1;Parent=gene-HMPREF1039_1424;Dbxref=NCBI_GP:EGL41459.1;Name=EGL41459.1;Note=identified by match to protein family HMM PF01170%3B match to protein family HMM PF08241;gbkey=CDS;locus_tag=HMPREF1039_1424;product=methyltransferase domain protein;protein_id=EGL41459.1;transl_table=11
AFIJ01000011.1	Genbank	gene	18435	19316	.	-	.	ID=gene-HMPREF1039_1425;Name=HMPREF1039_1425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1425
AFIJ01000011.1	Genbank	CDS	18435	19316	.	-	0	ID=cds-EGL41429.1;Parent=gene-HMPREF1039_1425;Dbxref=NCBI_GP:EGL41429.1;Name=EGL41429.1;Note=identified by match to protein family HMM PF04556;gbkey=CDS;locus_tag=HMPREF1039_1425;product=DpmII restriction endonuclease;protein_id=EGL41429.1;transl_table=11
AFIJ01000011.1	Genbank	gene	19398	20468	.	-	.	ID=gene-HMPREF1039_1426;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=HMPREF1039_1426
AFIJ01000011.1	Genbank	CDS	19398	20468	.	-	0	ID=cds-EGL41443.1;Parent=gene-HMPREF1039_1426;Dbxref=NCBI_GP:EGL41443.1;Name=EGL41443.1;Note=identified by match to protein family HMM PF02086%3B match to protein family HMM TIGR00571;gbkey=CDS;gene=dam;locus_tag=HMPREF1039_1426;product=DNA adenine methylase;protein_id=EGL41443.1;transl_table=11
AFIJ01000011.1	Genbank	gene	20603	21739	.	-	.	ID=gene-HMPREF1039_1427;Name=hydE;gbkey=Gene;gene=hydE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1427
AFIJ01000011.1	Genbank	CDS	20603	21739	.	-	0	ID=cds-EGL41439.1;Parent=gene-HMPREF1039_1427;Dbxref=NCBI_GP:EGL41439.1;Name=EGL41439.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03956;gbkey=CDS;gene=hydE;locus_tag=HMPREF1039_1427;product=iron-only hydrogenase maturation rSAM protein HydE;protein_id=EGL41439.1;transl_table=11
AFIJ01000011.1	Genbank	gene	21943	22773	.	-	.	ID=gene-HMPREF1039_1428;Name=uppP;gbkey=Gene;gene=uppP;gene_biotype=protein_coding;locus_tag=HMPREF1039_1428
AFIJ01000011.1	Genbank	CDS	21943	22773	.	-	0	ID=cds-EGL41456.1;Parent=gene-HMPREF1039_1428;Dbxref=NCBI_GP:EGL41456.1;Name=EGL41456.1;Note=identified by match to protein family HMM PF02673%3B match to protein family HMM TIGR00753;gbkey=CDS;gene=uppP;locus_tag=HMPREF1039_1428;product=undecaprenyl-diphosphatase UppP;protein_id=EGL41456.1;transl_table=11
AFIJ01000011.1	Genbank	gene	22911	23876	.	-	.	ID=gene-HMPREF1039_1429;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=HMPREF1039_1429
AFIJ01000011.1	Genbank	CDS	22911	23876	.	-	0	ID=cds-EGL41447.1;Parent=gene-HMPREF1039_1429;Dbxref=NCBI_GP:EGL41447.1;Name=EGL41447.1;Note=identified by match to protein family HMM PF03320%3B match to protein family HMM TIGR00330;gbkey=CDS;gene=glpX;locus_tag=HMPREF1039_1429;product=fructose-1%2C6-bisphosphatase%2C class II;protein_id=EGL41447.1;transl_table=11
AFIJ01000011.1	Genbank	gene	24018	25292	.	-	.	ID=gene-HMPREF1039_1430;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=HMPREF1039_1430
AFIJ01000011.1	Genbank	CDS	24018	25292	.	-	0	ID=cds-EGL41426.1;Parent=gene-HMPREF1039_1430;Dbxref=NCBI_GP:EGL41426.1;Name=EGL41426.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF02403%3B match to protein family HMM TIGR00414;gbkey=CDS;gene=serS;locus_tag=HMPREF1039_1430;product=serine--tRNA ligase;protein_id=EGL41426.1;transl_table=11
AFIJ01000011.1	Genbank	gene	25363	26001	.	-	.	ID=gene-HMPREF1039_1431;Name=HMPREF1039_1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1431
AFIJ01000011.1	Genbank	CDS	25363	26001	.	-	0	ID=cds-EGL41461.1;Parent=gene-HMPREF1039_1431;Dbxref=NCBI_GP:EGL41461.1;Name=EGL41461.1;Note=identified by match to protein family HMM PF00300;gbkey=CDS;locus_tag=HMPREF1039_1431;product=phosphoglycerate mutase family protein;protein_id=EGL41461.1;transl_table=11
AFIJ01000011.1	Genbank	gene	26011	27603	.	-	.	ID=gene-HMPREF1039_1432;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1432
AFIJ01000011.1	Genbank	CDS	26011	27603	.	-	0	ID=cds-EGL41454.1;Parent=gene-HMPREF1039_1432;Dbxref=NCBI_GP:EGL41454.1;Name=EGL41454.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF01842%3B match to protein family HMM PF02826%3B match to protein family HMM TIGR01327;gbkey=CDS;gene=serA;locus_tag=HMPREF1039_1432;product=phosphoglycerate dehydrogenase;protein_id=EGL41454.1;transl_table=11
AFIJ01000011.1	Genbank	gene	27621	28694	.	-	.	ID=gene-HMPREF1039_1433;Name=HMPREF1039_1433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1433
AFIJ01000011.1	Genbank	CDS	27621	28694	.	-	0	ID=cds-EGL41432.1;Parent=gene-HMPREF1039_1433;Dbxref=NCBI_GP:EGL41432.1;Name=EGL41432.1;Note=identified by match to protein family HMM PF00266;gbkey=CDS;locus_tag=HMPREF1039_1433;product=putative phosphoserine transaminase;protein_id=EGL41432.1;transl_table=11
AFIJ01000011.1	Genbank	sequence_feature	28735	28928	.	-	.	ID=id-AFIJ01000011.1:28735..28928;Note=T-box leader;gbkey=misc_feature
AFIJ01000011.1	Genbank	gene	29013	29957	.	-	.	ID=gene-HMPREF1039_1435;Name=HMPREF1039_1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1435
AFIJ01000011.1	Genbank	CDS	29013	29957	.	-	0	ID=cds-EGL41441.1;Parent=gene-HMPREF1039_1435;Dbxref=NCBI_GP:EGL41441.1;Name=EGL41441.1;gbkey=CDS;locus_tag=HMPREF1039_1435;product=hypothetical protein;protein_id=EGL41441.1;transl_table=11
AFIJ01000011.1	Genbank	gene	29978	30565	.	-	.	ID=gene-HMPREF1039_1436;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1436
AFIJ01000011.1	Genbank	CDS	29978	30565	.	-	0	ID=cds-EGL41448.1;Parent=gene-HMPREF1039_1436;Dbxref=NCBI_GP:EGL41448.1;Name=EGL41448.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01367;gbkey=CDS;gene=pyrE;locus_tag=HMPREF1039_1436;product=orotate phosphoribosyltransferase;protein_id=EGL41448.1;transl_table=11
AFIJ01000011.1	Genbank	gene	30572	31285	.	-	.	ID=gene-HMPREF1039_1437;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1437
AFIJ01000011.1	Genbank	CDS	30572	31285	.	-	0	ID=cds-EGL41449.1;Parent=gene-HMPREF1039_1437;Dbxref=NCBI_GP:EGL41449.1;Name=EGL41449.1;Note=identified by match to protein family HMM PF00215%3B match to protein family HMM TIGR01740;gbkey=CDS;gene=pyrF;locus_tag=HMPREF1039_1437;product=orotidine 5'-phosphate decarboxylase;protein_id=EGL41449.1;transl_table=11
AFIJ01000011.1	Genbank	gene	31445	31609	.	-	.	ID=gene-HMPREF1039_1438;Name=HMPREF1039_1438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1438
AFIJ01000011.1	Genbank	CDS	31445	31609	.	-	0	ID=cds-EGL41438.1;Parent=gene-HMPREF1039_1438;Dbxref=NCBI_GP:EGL41438.1;Name=EGL41438.1;Note=identified by match to protein family HMM PF00037;gbkey=CDS;locus_tag=HMPREF1039_1438;product=ferredoxin;protein_id=EGL41438.1;transl_table=11
AFIJ01000011.1	Genbank	gene	32037	33305	.	-	.	ID=gene-HMPREF1039_1439;Name=pyrP;gbkey=Gene;gene=pyrP;gene_biotype=protein_coding;locus_tag=HMPREF1039_1439
AFIJ01000011.1	Genbank	CDS	32037	33305	.	-	0	ID=cds-EGL41460.1;Parent=gene-HMPREF1039_1439;Dbxref=NCBI_GP:EGL41460.1;Name=EGL41460.1;Note=identified by match to protein family HMM PF00860%3B match to protein family HMM TIGR00801;gbkey=CDS;gene=pyrP;locus_tag=HMPREF1039_1439;product=putative permease;protein_id=EGL41460.1;transl_table=11
AFIJ01000011.1	Genbank	gene	33322	34563	.	-	.	ID=gene-HMPREF1039_1440;Name=HMPREF1039_1440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1440
AFIJ01000011.1	Genbank	CDS	33322	34563	.	-	0	ID=cds-EGL41453.1;Parent=gene-HMPREF1039_1440;Dbxref=NCBI_GP:EGL41453.1;Name=EGL41453.1;Note=identified by match to protein family HMM PF01098;gbkey=CDS;locus_tag=HMPREF1039_1440;product=cell cycle protein%2C FtsW/RodA/SpoVE family;protein_id=EGL41453.1;transl_table=11
AFIJ01000011.1	Genbank	gene	34547	35221	.	-	.	ID=gene-HMPREF1039_1441;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1441
AFIJ01000011.1	Genbank	CDS	34547	35221	.	-	0	ID=cds-EGL41450.1;Parent=gene-HMPREF1039_1441;Dbxref=NCBI_GP:EGL41450.1;Name=EGL41450.1;Note=identified by match to protein family HMM PF02390%3B match to protein family HMM TIGR00091;gbkey=CDS;gene=trmB;locus_tag=HMPREF1039_1441;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=EGL41450.1;transl_table=11
AFIJ01000011.1	Genbank	gene	35324	35536	.	-	.	ID=gene-HMPREF1039_1442;Name=HMPREF1039_1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1442
AFIJ01000011.1	Genbank	CDS	35324	35536	.	-	0	ID=cds-EGL41442.1;Parent=gene-HMPREF1039_1442;Dbxref=NCBI_GP:EGL41442.1;Name=EGL41442.1;Note=identified by match to protein family HMM PF06107;gbkey=CDS;locus_tag=HMPREF1039_1442;product=hypothetical protein;protein_id=EGL41442.1;transl_table=11
AFIJ01000011.1	Genbank	gene	35808	36095	.	+	.	ID=gene-HMPREF1039_1443;Name=HMPREF1039_1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1443
AFIJ01000011.1	Genbank	CDS	35808	36095	.	+	0	ID=cds-EGL41430.1;Parent=gene-HMPREF1039_1443;Dbxref=NCBI_GP:EGL41430.1;Name=EGL41430.1;gbkey=CDS;locus_tag=HMPREF1039_1443;product=hypothetical protein;protein_id=EGL41430.1;transl_table=11
AFIJ01000011.1	Genbank	gene	36100	36672	.	+	.	ID=gene-HMPREF1039_1444;Name=HMPREF1039_1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1444
AFIJ01000011.1	Genbank	CDS	36100	36672	.	+	0	ID=cds-EGL41428.1;Parent=gene-HMPREF1039_1444;Dbxref=NCBI_GP:EGL41428.1;Name=EGL41428.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1444;product=hypothetical protein;protein_id=EGL41428.1;transl_table=11
AFIJ01000011.1	Genbank	gene	36688	37233	.	+	.	ID=gene-HMPREF1039_1445;Name=HMPREF1039_1445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1445
AFIJ01000011.1	Genbank	CDS	36688	37233	.	+	0	ID=cds-EGL41445.1;Parent=gene-HMPREF1039_1445;Dbxref=NCBI_GP:EGL41445.1;Name=EGL41445.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1445;product=hypothetical protein;protein_id=EGL41445.1;transl_table=11
##sequence-region AFIJ01000010.1 1 2931
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000010.1	Genbank	region	1	2931	.	+	.	ID=AFIJ01000010.1:1..2931;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000010.1	Genbank	gene	1	115	.	-	.	ID=gene-HMPREF1039_1615;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF1039_1615
AFIJ01000010.1	Genbank	rRNA	1	115	.	-	.	ID=rna-HMPREF1039_1615;Parent=gene-HMPREF1039_1615;gbkey=rRNA;gene=rrf;locus_tag=HMPREF1039_1615;product=5S ribosomal RNA
AFIJ01000010.1	Genbank	exon	1	115	.	-	.	ID=exon-HMPREF1039_1615-1;Parent=rna-HMPREF1039_1615;gbkey=rRNA;gene=rrf;locus_tag=HMPREF1039_1615;product=5S ribosomal RNA
AFIJ01000010.1	Genbank	gene	178	2922	.	-	.	ID=gene-HMPREF1039_1616;Name=rrl;gbkey=Gene;gene=rrl;gene_biotype=rRNA;locus_tag=HMPREF1039_1616
AFIJ01000010.1	Genbank	rRNA	178	2922	.	-	.	ID=rna-HMPREF1039_1616;Parent=gene-HMPREF1039_1616;gbkey=rRNA;gene=rrl;locus_tag=HMPREF1039_1616;product=23S ribosomal RNA
AFIJ01000010.1	Genbank	exon	178	2922	.	-	.	ID=exon-HMPREF1039_1616-1;Parent=rna-HMPREF1039_1616;gbkey=rRNA;gene=rrl;locus_tag=HMPREF1039_1616;product=23S ribosomal RNA
##sequence-region AFIJ01000009.1 1 28506
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000009.1	Genbank	region	1	28506	.	+	.	ID=AFIJ01000009.1:1..28506;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000009.1	Genbank	gene	73	1635	.	-	.	ID=gene-HMPREF1039_1476;Name=cshA;gbkey=Gene;gene=cshA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1476
AFIJ01000009.1	Genbank	CDS	73	1635	.	-	0	ID=cds-EGL41626.1;Parent=gene-HMPREF1039_1476;Dbxref=NCBI_GP:EGL41626.1;Name=EGL41626.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271;gbkey=CDS;gene=cshA;locus_tag=HMPREF1039_1476;product=DEAD/DEAH box helicase;protein_id=EGL41626.1;transl_table=11
AFIJ01000009.1	Genbank	gene	1841	1916	.	-	.	ID=gene-HMPREF1039_1477;Name=HMPREF1039_1477;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1477
AFIJ01000009.1	Genbank	tRNA	1841	1916	.	-	.	ID=rna-HMPREF1039_1477;Parent=gene-HMPREF1039_1477;gbkey=tRNA;locus_tag=HMPREF1039_1477;product=tRNA-Lys
AFIJ01000009.1	Genbank	exon	1841	1916	.	-	.	ID=exon-HMPREF1039_1477-1;Parent=rna-HMPREF1039_1477;gbkey=tRNA;locus_tag=HMPREF1039_1477;product=tRNA-Lys
AFIJ01000009.1	Genbank	gene	2130	6896	.	+	.	ID=gene-HMPREF1039_1478;Name=HMPREF1039_1478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1478
AFIJ01000009.1	Genbank	CDS	2130	6896	.	+	0	ID=cds-EGL41644.1;Parent=gene-HMPREF1039_1478;Dbxref=NCBI_GP:EGL41644.1;Name=EGL41644.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;locus_tag=HMPREF1039_1478;product=TonB-dependent receptor plug domain protein;protein_id=EGL41644.1;transl_table=11
AFIJ01000009.1	Genbank	gene	6987	7217	.	-	.	ID=gene-HMPREF1039_1479;Name=HMPREF1039_1479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1479
AFIJ01000009.1	Genbank	CDS	6987	7217	.	-	0	ID=cds-EGL41634.1;Parent=gene-HMPREF1039_1479;Dbxref=NCBI_GP:EGL41634.1;Name=EGL41634.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1479;product=hypothetical protein;protein_id=EGL41634.1;transl_table=11
AFIJ01000009.1	Genbank	gene	7201	7941	.	-	.	ID=gene-HMPREF1039_1480;Name=HMPREF1039_1480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1480
AFIJ01000009.1	Genbank	CDS	7201	7941	.	-	0	ID=cds-EGL41643.1;Parent=gene-HMPREF1039_1480;Dbxref=NCBI_GP:EGL41643.1;Name=EGL41643.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF1039_1480;product=Ser/Thr phosphatase family protein;protein_id=EGL41643.1;transl_table=11
AFIJ01000009.1	Genbank	gene	7954	8739	.	-	.	ID=gene-HMPREF1039_1481;Name=HMPREF1039_1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1481
AFIJ01000009.1	Genbank	CDS	7954	8739	.	-	0	ID=cds-EGL41642.1;Parent=gene-HMPREF1039_1481;Dbxref=NCBI_GP:EGL41642.1;Name=EGL41642.1;gbkey=CDS;locus_tag=HMPREF1039_1481;product=hypothetical protein;protein_id=EGL41642.1;transl_table=11
AFIJ01000009.1	Genbank	gene	8845	9912	.	+	.	ID=gene-HMPREF1039_1482;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=HMPREF1039_1482
AFIJ01000009.1	Genbank	CDS	8845	9912	.	+	0	ID=cds-EGL41639.1;Parent=gene-HMPREF1039_1482;Dbxref=NCBI_GP:EGL41639.1;Name=EGL41639.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01084;gbkey=CDS;gene=mutY;locus_tag=HMPREF1039_1482;product=A/G-specific adenine glycosylase;protein_id=EGL41639.1;transl_table=11
AFIJ01000009.1	Genbank	gene	9909	11144	.	+	.	ID=gene-HMPREF1039_1483;Name=HMPREF1039_1483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1483
AFIJ01000009.1	Genbank	CDS	9909	11144	.	+	0	ID=cds-EGL41629.1;Parent=gene-HMPREF1039_1483;Dbxref=NCBI_GP:EGL41629.1;Name=EGL41629.1;Note=identified by match to protein family HMM PF00149;gbkey=CDS;locus_tag=HMPREF1039_1483;product=Tat pathway signal sequence domain protein;protein_id=EGL41629.1;transl_table=11
AFIJ01000009.1	Genbank	gene	11165	12256	.	-	.	ID=gene-HMPREF1039_1484;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1484
AFIJ01000009.1	Genbank	CDS	11165	12256	.	-	0	ID=cds-EGL41628.1;Parent=gene-HMPREF1039_1484;Dbxref=NCBI_GP:EGL41628.1;Name=EGL41628.1;Note=identified by match to protein family HMM PF02481%3B match to protein family HMM TIGR00732;gbkey=CDS;gene=dprA;locus_tag=HMPREF1039_1484;product=DNA protecting protein DprA;protein_id=EGL41628.1;transl_table=11
AFIJ01000009.1	Genbank	gene	12277	13794	.	-	.	ID=gene-HMPREF1039_1485;Name=HMPREF1039_1485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1485
AFIJ01000009.1	Genbank	CDS	12277	13794	.	-	0	ID=cds-EGL41635.1;Parent=gene-HMPREF1039_1485;Dbxref=NCBI_GP:EGL41635.1;Name=EGL41635.1;Note=identified by match to protein family HMM PF01078%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00368;gbkey=CDS;locus_tag=HMPREF1039_1485;product=Mg chelatase-like protein;protein_id=EGL41635.1;transl_table=11
AFIJ01000009.1	Genbank	gene	13803	14171	.	-	.	ID=gene-HMPREF1039_1486;Name=HMPREF1039_1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1486
AFIJ01000009.1	Genbank	CDS	13803	14171	.	-	0	ID=cds-EGL41631.1;Parent=gene-HMPREF1039_1486;Dbxref=NCBI_GP:EGL41631.1;Name=EGL41631.1;Note=identified by match to protein family HMM PF02021%3B match to protein family HMM TIGR00252;gbkey=CDS;locus_tag=HMPREF1039_1486;product=TIGR00252 family protein;protein_id=EGL41631.1;transl_table=11
AFIJ01000009.1	Genbank	gene	14341	16623	.	-	.	ID=gene-HMPREF1039_1487;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=HMPREF1039_1487
AFIJ01000009.1	Genbank	CDS	14341	16623	.	-	0	ID=cds-EGL41638.1;Parent=gene-HMPREF1039_1487;Dbxref=NCBI_GP:EGL41638.1;Name=EGL41638.1;Note=identified by match to protein family HMM PF01717%3B match to protein family HMM PF08267%3B match to protein family HMM TIGR01371;gbkey=CDS;gene=metE;locus_tag=HMPREF1039_1487;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=EGL41638.1;transl_table=11
AFIJ01000009.1	Genbank	gene	16734	17645	.	-	.	ID=gene-HMPREF1039_1488;Name=HMPREF1039_1488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1488
AFIJ01000009.1	Genbank	CDS	16734	17645	.	-	0	ID=cds-EGL41640.1;Parent=gene-HMPREF1039_1488;Dbxref=NCBI_GP:EGL41640.1;Name=EGL41640.1;Note=identified by match to protein family HMM PF00126;gbkey=CDS;locus_tag=HMPREF1039_1488;product=transcriptional regulator%2C LysR family;protein_id=EGL41640.1;transl_table=11
AFIJ01000009.1	Genbank	gene	17673	19394	.	-	.	ID=gene-HMPREF1039_1489;Name=FbpA;gbkey=Gene;gene=FbpA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1489
AFIJ01000009.1	Genbank	CDS	17673	19394	.	-	0	ID=cds-EGL41627.1;Parent=gene-HMPREF1039_1489;Dbxref=NCBI_GP:EGL41627.1;Name=EGL41627.1;Note=N-terminal%3B identified by match to protein family HMM PF05670%3B match to protein family HMM PF05833;gbkey=CDS;gene=FbpA;locus_tag=HMPREF1039_1489;product=fibronectin-binding protein A domain protein;protein_id=EGL41627.1;transl_table=11
AFIJ01000009.1	Genbank	sequence_feature	19597	19841	.	+	.	ID=id-AFIJ01000009.1:19597..19841;Note=T-box leader;gbkey=misc_feature
AFIJ01000009.1	Genbank	gene	19895	21616	.	+	.	ID=gene-HMPREF1039_1491;Name=HMPREF1039_1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1491
AFIJ01000009.1	Genbank	CDS	19895	21616	.	+	0	ID=cds-EGL41636.1;Parent=gene-HMPREF1039_1491;Dbxref=NCBI_GP:EGL41636.1;Name=EGL41636.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF08502;gbkey=CDS;locus_tag=HMPREF1039_1491;product=2-isopropylmalate synthase;protein_id=EGL41636.1;transl_table=11
AFIJ01000009.1	Genbank	gene	21629	22885	.	+	.	ID=gene-HMPREF1039_1492;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=HMPREF1039_1492
AFIJ01000009.1	Genbank	CDS	21629	22885	.	+	0	ID=cds-EGL41625.1;Parent=gene-HMPREF1039_1492;Dbxref=NCBI_GP:EGL41625.1;Name=EGL41625.1;Note=identified by match to protein family HMM PF00330%3B match to protein family HMM TIGR01343%3B match to protein family HMM TIGR02083%3B match to protein family HMM TIGR02086;gbkey=CDS;gene=leuC;locus_tag=HMPREF1039_1492;product=3-isopropylmalate dehydratase%2C large subunit;protein_id=EGL41625.1;transl_table=11
AFIJ01000009.1	Genbank	gene	22888	23406	.	+	.	ID=gene-HMPREF1039_1493;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=HMPREF1039_1493
AFIJ01000009.1	Genbank	CDS	22888	23406	.	+	0	ID=cds-EGL41637.1;Parent=gene-HMPREF1039_1493;Dbxref=NCBI_GP:EGL41637.1;Name=EGL41637.1;Note=identified by match to protein family HMM PF00694%3B match to protein family HMM TIGR02087;gbkey=CDS;gene=leuD;locus_tag=HMPREF1039_1493;product=3-isopropylmalate dehydratase small subunit;protein_id=EGL41637.1;transl_table=11
AFIJ01000009.1	Genbank	gene	23378	24442	.	+	.	ID=gene-HMPREF1039_1494;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1494
AFIJ01000009.1	Genbank	CDS	23378	24442	.	+	0	ID=cds-EGL41641.1;Parent=gene-HMPREF1039_1494;Dbxref=NCBI_GP:EGL41641.1;Name=EGL41641.1;Note=identified by match to protein family HMM PF00180%3B match to protein family HMM TIGR00169;gbkey=CDS;gene=leuB;locus_tag=HMPREF1039_1494;product=3-isopropylmalate dehydrogenase;protein_id=EGL41641.1;transl_table=11
AFIJ01000009.1	Genbank	gene	24524	24679	.	+	.	ID=gene-HMPREF1039_1495;Name=HMPREF1039_1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1495
AFIJ01000009.1	Genbank	CDS	24524	24679	.	+	0	ID=cds-EGL41632.1;Parent=gene-HMPREF1039_1495;Dbxref=NCBI_GP:EGL41632.1;Name=EGL41632.1;gbkey=CDS;locus_tag=HMPREF1039_1495;product=hypothetical protein;protein_id=EGL41632.1;transl_table=11
AFIJ01000009.1	Genbank	gene	24840	26021	.	-	.	ID=gene-HMPREF1039_1496;Name=HMPREF1039_1496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1496
AFIJ01000009.1	Genbank	CDS	24840	26021	.	-	0	ID=cds-EGL41633.1;Parent=gene-HMPREF1039_1496;Dbxref=NCBI_GP:EGL41633.1;Name=EGL41633.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF07724%3B match to protein family HMM PF07728;gbkey=CDS;locus_tag=HMPREF1039_1496;product=ATPase family associated with various cellular activities (AAA);protein_id=EGL41633.1;transl_table=11
AFIJ01000009.1	Genbank	gene	25982	27424	.	-	.	ID=gene-HMPREF1039_1497;Name=HMPREF1039_1497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1497
AFIJ01000009.1	Genbank	CDS	25982	27424	.	-	0	ID=cds-EGL41630.1;Parent=gene-HMPREF1039_1497;Dbxref=NCBI_GP:EGL41630.1;Name=EGL41630.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00004%3B match to protein family HMM PF02861;gbkey=CDS;locus_tag=HMPREF1039_1497;product=ATPase%2C AAA family;protein_id=EGL41630.1;transl_table=11
AFIJ01000009.1	Genbank	gene	27639	28490	.	+	.	ID=gene-HMPREF1039_1498;Name=HMPREF1039_1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1498
AFIJ01000009.1	Genbank	CDS	27639	28490	.	+	0	ID=cds-EGL41624.1;Parent=gene-HMPREF1039_1498;Dbxref=NCBI_GP:EGL41624.1;Name=EGL41624.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF08238;gbkey=CDS;locus_tag=HMPREF1039_1498;product=Sel1 repeat protein;protein_id=EGL41624.1;transl_table=11
##sequence-region AFIJ01000008.1 1 149073
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000008.1	Genbank	region	1	149073	.	+	.	ID=AFIJ01000008.1:1..149073;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000008.1	Genbank	gene	32	108	.	-	.	ID=gene-HMPREF1039_0001;Name=HMPREF1039_0001;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0001
AFIJ01000008.1	Genbank	tRNA	32	108	.	-	.	ID=rna-HMPREF1039_0001;Parent=gene-HMPREF1039_0001;gbkey=tRNA;locus_tag=HMPREF1039_0001;product=tRNA-Pro
AFIJ01000008.1	Genbank	exon	32	108	.	-	.	ID=exon-HMPREF1039_0001-1;Parent=rna-HMPREF1039_0001;gbkey=tRNA;locus_tag=HMPREF1039_0001;product=tRNA-Pro
AFIJ01000008.1	Genbank	gene	536	733	.	+	.	ID=gene-HMPREF1039_0002;Name=HMPREF1039_0002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0002
AFIJ01000008.1	Genbank	CDS	536	733	.	+	0	ID=cds-EGL41814.1;Parent=gene-HMPREF1039_0002;Dbxref=NCBI_GP:EGL41814.1;Name=EGL41814.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0002;product=hypothetical protein;protein_id=EGL41814.1;transl_table=11
AFIJ01000008.1	Genbank	gene	809	1690	.	+	.	ID=gene-HMPREF1039_0003;Name=HMPREF1039_0003;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0003
AFIJ01000008.1	Genbank	CDS	809	1690	.	+	0	ID=cds-EGL41920.1;Parent=gene-HMPREF1039_0003;Dbxref=NCBI_GP:EGL41920.1;Name=EGL41920.1;gbkey=CDS;locus_tag=HMPREF1039_0003;product=hypothetical protein;protein_id=EGL41920.1;transl_table=11
AFIJ01000008.1	Genbank	gene	1687	1947	.	+	.	ID=gene-HMPREF1039_0004;Name=HMPREF1039_0004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0004
AFIJ01000008.1	Genbank	CDS	1687	1947	.	+	0	ID=cds-EGL41843.1;Parent=gene-HMPREF1039_0004;Dbxref=NCBI_GP:EGL41843.1;Name=EGL41843.1;gbkey=CDS;locus_tag=HMPREF1039_0004;product=hypothetical protein;protein_id=EGL41843.1;transl_table=11
AFIJ01000008.1	Genbank	gene	2006	2593	.	+	.	ID=gene-HMPREF1039_0005;Name=HMPREF1039_0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0005
AFIJ01000008.1	Genbank	CDS	2006	2593	.	+	0	ID=cds-EGL41831.1;Parent=gene-HMPREF1039_0005;Dbxref=NCBI_GP:EGL41831.1;Name=EGL41831.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0005;product=hypothetical protein;protein_id=EGL41831.1;transl_table=11
AFIJ01000008.1	Genbank	gene	2987	3316	.	+	.	ID=gene-HMPREF1039_0006;Name=HMPREF1039_0006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0006
AFIJ01000008.1	Genbank	CDS	2987	3316	.	+	0	ID=cds-EGL41916.1;Parent=gene-HMPREF1039_0006;Dbxref=NCBI_GP:EGL41916.1;Name=EGL41916.1;gbkey=CDS;locus_tag=HMPREF1039_0006;product=hypothetical protein;protein_id=EGL41916.1;transl_table=11
AFIJ01000008.1	Genbank	gene	3316	3483	.	+	.	ID=gene-HMPREF1039_0007;Name=HMPREF1039_0007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0007
AFIJ01000008.1	Genbank	CDS	3316	3483	.	+	0	ID=cds-EGL41873.1;Parent=gene-HMPREF1039_0007;Dbxref=NCBI_GP:EGL41873.1;Name=EGL41873.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0007;product=hypothetical protein;protein_id=EGL41873.1;transl_table=11
AFIJ01000008.1	Genbank	gene	4368	4733	.	+	.	ID=gene-HMPREF1039_0008;Name=HMPREF1039_0008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0008
AFIJ01000008.1	Genbank	CDS	4368	4733	.	+	0	ID=cds-EGL41938.1;Parent=gene-HMPREF1039_0008;Dbxref=NCBI_GP:EGL41938.1;Name=EGL41938.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0008;product=hypothetical protein;protein_id=EGL41938.1;transl_table=11
AFIJ01000008.1	Genbank	gene	4777	5025	.	+	.	ID=gene-HMPREF1039_0009;Name=HMPREF1039_0009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0009
AFIJ01000008.1	Genbank	CDS	4777	5025	.	+	0	ID=cds-EGL41919.1;Parent=gene-HMPREF1039_0009;Dbxref=NCBI_GP:EGL41919.1;Name=EGL41919.1;gbkey=CDS;locus_tag=HMPREF1039_0009;product=hypothetical protein;protein_id=EGL41919.1;transl_table=11
AFIJ01000008.1	Genbank	gene	5132	8623	.	+	.	ID=gene-HMPREF1039_0010;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0010
AFIJ01000008.1	Genbank	CDS	5132	8623	.	+	0	ID=cds-EGL41850.1;Parent=gene-HMPREF1039_0010;Dbxref=NCBI_GP:EGL41850.1;Name=EGL41850.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR00594;gbkey=CDS;gene=dnaE;locus_tag=HMPREF1039_0010;product=DNA polymerase III%2C alpha subunit;protein_id=EGL41850.1;transl_table=11
AFIJ01000008.1	Genbank	gene	8830	9390	.	+	.	ID=gene-HMPREF1039_0011;Name=HMPREF1039_0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0011
AFIJ01000008.1	Genbank	CDS	8830	9390	.	+	0	ID=cds-EGL41904.1;Parent=gene-HMPREF1039_0011;Dbxref=NCBI_GP:EGL41904.1;Name=EGL41904.1;gbkey=CDS;locus_tag=HMPREF1039_0011;product=hypothetical protein;protein_id=EGL41904.1;transl_table=11
AFIJ01000008.1	Genbank	gene	9454	10971	.	-	.	ID=gene-HMPREF1039_0012;Name=HMPREF1039_0012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0012
AFIJ01000008.1	Genbank	CDS	9454	10971	.	-	0	ID=cds-EGL41817.1;Parent=gene-HMPREF1039_0012;Dbxref=NCBI_GP:EGL41817.1;Name=EGL41817.1;Note=identified by match to protein family HMM PF02652%3B match to protein family HMM TIGR00795;gbkey=CDS;locus_tag=HMPREF1039_0012;product=transporter%2C lactate permease (LctP) family;protein_id=EGL41817.1;transl_table=11
AFIJ01000008.1	Genbank	gene	11211	11846	.	-	.	ID=gene-HMPREF1039_0013;Name=HMPREF1039_0013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0013
AFIJ01000008.1	Genbank	CDS	11211	11846	.	-	0	ID=cds-EGL41902.1;Parent=gene-HMPREF1039_0013;Dbxref=NCBI_GP:EGL41902.1;Name=EGL41902.1;Note=identified by match to protein family HMM PF06555;gbkey=CDS;locus_tag=HMPREF1039_0013;product=hypothetical protein;protein_id=EGL41902.1;transl_table=11
AFIJ01000008.1	Genbank	gene	12019	12786	.	-	.	ID=gene-HMPREF1039_0014;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0014
AFIJ01000008.1	Genbank	CDS	12019	12786	.	-	0	ID=cds-EGL41820.1;Parent=gene-HMPREF1039_0014;Dbxref=NCBI_GP:EGL41820.1;Name=EGL41820.1;Note=identified by match to protein family HMM PF00912;gbkey=CDS;gene=mrcA;locus_tag=HMPREF1039_0014;product=transglycosylase;protein_id=EGL41820.1;transl_table=11
AFIJ01000008.1	Genbank	gene	12962	14191	.	+	.	ID=gene-HMPREF1039_0015;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0015
AFIJ01000008.1	Genbank	CDS	12962	14191	.	+	0	ID=cds-EGL41821.1;Parent=gene-HMPREF1039_0015;Dbxref=NCBI_GP:EGL41821.1;Name=EGL41821.1;Note=identified by match to protein family HMM PF00764%3B match to protein family HMM TIGR00032;gbkey=CDS;gene=argG;locus_tag=HMPREF1039_0015;product=argininosuccinate synthase;protein_id=EGL41821.1;transl_table=11
AFIJ01000008.1	Genbank	gene	14213	15649	.	+	.	ID=gene-HMPREF1039_0016;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0016
AFIJ01000008.1	Genbank	CDS	14213	15649	.	+	0	ID=cds-EGL41874.1;Parent=gene-HMPREF1039_0016;Dbxref=NCBI_GP:EGL41874.1;Name=EGL41874.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00838;gbkey=CDS;gene=argH;locus_tag=HMPREF1039_0016;product=argininosuccinate lyase;protein_id=EGL41874.1;transl_table=11
AFIJ01000008.1	Genbank	gene	15817	16656	.	+	.	ID=gene-HMPREF1039_0017;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0017
AFIJ01000008.1	Genbank	CDS	15817	16656	.	+	0	ID=cds-EGL41855.1;Parent=gene-HMPREF1039_0017;Dbxref=NCBI_GP:EGL41855.1;Name=EGL41855.1;Note=identified by match to protein family HMM PF03331%3B match to protein family HMM TIGR00325;gbkey=CDS;gene=lpxC;locus_tag=HMPREF1039_0017;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=EGL41855.1;transl_table=11
AFIJ01000008.1	Genbank	gene	16671	17114	.	+	.	ID=gene-HMPREF1039_0018;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0018
AFIJ01000008.1	Genbank	CDS	16671	17114	.	+	0	ID=cds-EGL41901.1;Parent=gene-HMPREF1039_0018;Dbxref=NCBI_GP:EGL41901.1;Name=EGL41901.1;Note=identified by match to protein family HMM PF07977%3B match to protein family HMM TIGR01750;gbkey=CDS;gene=fabZ;locus_tag=HMPREF1039_0018;product=beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;protein_id=EGL41901.1;transl_table=11
AFIJ01000008.1	Genbank	gene	17312	18121	.	+	.	ID=gene-HMPREF1039_0019;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0019
AFIJ01000008.1	Genbank	CDS	17312	18121	.	+	0	ID=cds-EGL41830.1;Parent=gene-HMPREF1039_0019;Dbxref=NCBI_GP:EGL41830.1;Name=EGL41830.1;Note=identified by match to protein family HMM PF00132%3B match to protein family HMM TIGR01852;gbkey=CDS;gene=lpxA;locus_tag=HMPREF1039_0019;product=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase;protein_id=EGL41830.1;transl_table=11
AFIJ01000008.1	Genbank	gene	18238	19053	.	+	.	ID=gene-HMPREF1039_0020;Name=HMPREF1039_0020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0020
AFIJ01000008.1	Genbank	CDS	18238	19053	.	+	0	ID=cds-EGL41905.1;Parent=gene-HMPREF1039_0020;Dbxref=NCBI_GP:EGL41905.1;Name=EGL41905.1;Note=identified by match to protein family HMM PF06230;gbkey=CDS;locus_tag=HMPREF1039_0020;product=hypothetical protein;protein_id=EGL41905.1;transl_table=11
AFIJ01000008.1	Genbank	gene	19062	20204	.	+	.	ID=gene-HMPREF1039_0021;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0021
AFIJ01000008.1	Genbank	CDS	19062	20204	.	+	0	ID=cds-EGL41936.1;Parent=gene-HMPREF1039_0021;Dbxref=NCBI_GP:EGL41936.1;Name=EGL41936.1;Note=identified by match to protein family HMM PF02684%3B match to protein family HMM TIGR00215;gbkey=CDS;gene=lpxB;locus_tag=HMPREF1039_0021;product=lipid-A-disaccharide synthase;protein_id=EGL41936.1;transl_table=11
AFIJ01000008.1	Genbank	gene	20201	21955	.	+	.	ID=gene-HMPREF1039_0022;Name=HMPREF1039_0022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0022
AFIJ01000008.1	Genbank	CDS	20201	21955	.	+	0	ID=cds-EGL41866.1;Parent=gene-HMPREF1039_0022;Dbxref=NCBI_GP:EGL41866.1;Name=EGL41866.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF00664;gbkey=CDS;locus_tag=HMPREF1039_0022;product=putative lipid A export permease/ATP-binding protein MsbA;protein_id=EGL41866.1;transl_table=11
AFIJ01000008.1	Genbank	gene	21968	23278	.	+	.	ID=gene-HMPREF1039_0023;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0023
AFIJ01000008.1	Genbank	CDS	21968	23278	.	+	0	ID=cds-EGL41894.1;Parent=gene-HMPREF1039_0023;Dbxref=NCBI_GP:EGL41894.1;Name=EGL41894.1;Note=identified by match to protein family HMM PF04413;gbkey=CDS;gene=waaA;locus_tag=HMPREF1039_0023;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=EGL41894.1;transl_table=11
AFIJ01000008.1	Genbank	gene	23262	24395	.	+	.	ID=gene-HMPREF1039_0024;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=HMPREF1039_0024
AFIJ01000008.1	Genbank	CDS	23262	24395	.	+	0	ID=cds-EGL41859.1;Parent=gene-HMPREF1039_0024;Dbxref=NCBI_GP:EGL41859.1;Name=EGL41859.1;Note=identified by match to protein family HMM PF02606%3B match to protein family HMM TIGR00682;gbkey=CDS;gene=lpxK;locus_tag=HMPREF1039_0024;product=tetraacyldisaccharide 4'-kinase;protein_id=EGL41859.1;transl_table=11
AFIJ01000008.1	Genbank	gene	24392	25129	.	+	.	ID=gene-HMPREF1039_0025;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0025
AFIJ01000008.1	Genbank	CDS	24392	25129	.	+	0	ID=cds-EGL41930.1;Parent=gene-HMPREF1039_0025;Dbxref=NCBI_GP:EGL41930.1;Name=EGL41930.1;Note=identified by match to protein family HMM PF02348%3B match to protein family HMM TIGR00466;gbkey=CDS;gene=kdsB;locus_tag=HMPREF1039_0025;product=3-deoxy-D-manno-octulosonate cytidylyltransferase;protein_id=EGL41930.1;transl_table=11
AFIJ01000008.1	Genbank	gene	25133	25978	.	+	.	ID=gene-HMPREF1039_0026;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0026
AFIJ01000008.1	Genbank	CDS	25133	25978	.	+	0	ID=cds-EGL41903.1;Parent=gene-HMPREF1039_0026;Dbxref=NCBI_GP:EGL41903.1;Name=EGL41903.1;Note=identified by match to protein family HMM PF00793%3B match to protein family HMM TIGR01362;gbkey=CDS;gene=kdsA;locus_tag=HMPREF1039_0026;product=3-deoxy-8-phosphooctulonate synthase;protein_id=EGL41903.1;transl_table=11
AFIJ01000008.1	Genbank	gene	25996	26967	.	+	.	ID=gene-HMPREF1039_0027;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0027
AFIJ01000008.1	Genbank	CDS	25996	26967	.	+	0	ID=cds-EGL41803.1;Parent=gene-HMPREF1039_0027;Dbxref=NCBI_GP:EGL41803.1;Name=EGL41803.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR00393;gbkey=CDS;gene=kdsD;locus_tag=HMPREF1039_0027;product=sugar isomerase%2C KpsF/GutQ family;protein_id=EGL41803.1;transl_table=11
AFIJ01000008.1	Genbank	gene	26964	27500	.	+	.	ID=gene-HMPREF1039_0028;Name=HMPREF1039_0028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0028
AFIJ01000008.1	Genbank	CDS	26964	27500	.	+	0	ID=cds-EGL41947.1;Parent=gene-HMPREF1039_0028;Dbxref=NCBI_GP:EGL41947.1;Name=EGL41947.1;Note=identified by match to protein family HMM TIGR01662%3B match to protein family HMM TIGR01670;gbkey=CDS;locus_tag=HMPREF1039_0028;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase%2C YrbI family;protein_id=EGL41947.1;transl_table=11
AFIJ01000008.1	Genbank	gene	27519	28451	.	+	.	ID=gene-HMPREF1039_0029;Name=HMPREF1039_0029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0029
AFIJ01000008.1	Genbank	CDS	27519	28451	.	+	0	ID=cds-EGL41857.1;Parent=gene-HMPREF1039_0029;Dbxref=NCBI_GP:EGL41857.1;Name=EGL41857.1;Note=identified by match to protein family HMM PF03279;gbkey=CDS;locus_tag=HMPREF1039_0029;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=EGL41857.1;transl_table=11
AFIJ01000008.1	Genbank	gene	28432	28983	.	+	.	ID=gene-HMPREF1039_0030;Name=HMPREF1039_0030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0030
AFIJ01000008.1	Genbank	CDS	28432	28983	.	+	0	ID=cds-EGL41921.1;Parent=gene-HMPREF1039_0030;Dbxref=NCBI_GP:EGL41921.1;Name=EGL41921.1;Note=identified by match to protein family HMM PF06835;gbkey=CDS;locus_tag=HMPREF1039_0030;product=hypothetical protein;protein_id=EGL41921.1;transl_table=11
AFIJ01000008.1	Genbank	gene	28986	29714	.	+	.	ID=gene-HMPREF1039_0031;Name=HMPREF1039_0031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0031
AFIJ01000008.1	Genbank	CDS	28986	29714	.	+	0	ID=cds-EGL41838.1;Parent=gene-HMPREF1039_0031;Dbxref=NCBI_GP:EGL41838.1;Name=EGL41838.1;Note=identified by match to protein family HMM PF03968;gbkey=CDS;locus_tag=HMPREF1039_0031;product=OstA-like protein;protein_id=EGL41838.1;transl_table=11
AFIJ01000008.1	Genbank	gene	29732	30451	.	+	.	ID=gene-HMPREF1039_0032;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0032
AFIJ01000008.1	Genbank	CDS	29732	30451	.	+	0	ID=cds-EGL41893.1;Parent=gene-HMPREF1039_0032;Dbxref=NCBI_GP:EGL41893.1;Name=EGL41893.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=lptB;locus_tag=HMPREF1039_0032;product=ABC transporter%2C ATP-binding protein;protein_id=EGL41893.1;transl_table=11
AFIJ01000008.1	Genbank	gene	30468	31556	.	+	.	ID=gene-HMPREF1039_0033;Name=HMPREF1039_0033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0033
AFIJ01000008.1	Genbank	CDS	30468	31556	.	+	0	ID=cds-EGL41807.1;Parent=gene-HMPREF1039_0033;Dbxref=NCBI_GP:EGL41807.1;Name=EGL41807.1;Note=identified by match to protein family HMM PF03739;gbkey=CDS;locus_tag=HMPREF1039_0033;product=permease%2C YjgP/YjgQ family;protein_id=EGL41807.1;transl_table=11
AFIJ01000008.1	Genbank	gene	31649	32932	.	+	.	ID=gene-HMPREF1039_0034;Name=HMPREF1039_0034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0034
AFIJ01000008.1	Genbank	CDS	31649	32932	.	+	0	ID=cds-EGL41885.1;Parent=gene-HMPREF1039_0034;Dbxref=NCBI_GP:EGL41885.1;Name=EGL41885.1;gbkey=CDS;locus_tag=HMPREF1039_0034;product=hypothetical protein;protein_id=EGL41885.1;transl_table=11
AFIJ01000008.1	Genbank	gene	32942	33358	.	+	.	ID=gene-HMPREF1039_0035;Name=HMPREF1039_0035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0035
AFIJ01000008.1	Genbank	CDS	32942	33358	.	+	0	ID=cds-EGL41806.1;Parent=gene-HMPREF1039_0035;Dbxref=NCBI_GP:EGL41806.1;Name=EGL41806.1;gbkey=CDS;locus_tag=HMPREF1039_0035;product=hypothetical protein;protein_id=EGL41806.1;transl_table=11
AFIJ01000008.1	Genbank	gene	33355	34215	.	+	.	ID=gene-HMPREF1039_0036;Name=HMPREF1039_0036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0036
AFIJ01000008.1	Genbank	CDS	33355	34215	.	+	0	ID=cds-EGL41935.1;Parent=gene-HMPREF1039_0036;Dbxref=NCBI_GP:EGL41935.1;Name=EGL41935.1;Note=identified by match to protein family HMM PF02588;gbkey=CDS;locus_tag=HMPREF1039_0036;product=hypothetical protein;protein_id=EGL41935.1;transl_table=11
AFIJ01000008.1	Genbank	gene	34332	34568	.	+	.	ID=gene-HMPREF1039_0037;Name=HMPREF1039_0037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0037
AFIJ01000008.1	Genbank	CDS	34332	34568	.	+	0	ID=cds-EGL41860.1;Parent=gene-HMPREF1039_0037;Dbxref=NCBI_GP:EGL41860.1;Name=EGL41860.1;gbkey=CDS;locus_tag=HMPREF1039_0037;product=hypothetical protein;protein_id=EGL41860.1;transl_table=11
AFIJ01000008.1	Genbank	gene	34716	35258	.	+	.	ID=gene-HMPREF1039_0038;Name=HMPREF1039_0038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0038
AFIJ01000008.1	Genbank	CDS	34716	35258	.	+	0	ID=cds-EGL41924.1;Parent=gene-HMPREF1039_0038;Dbxref=NCBI_GP:EGL41924.1;Name=EGL41924.1;Note=identified by match to protein family HMM PF08220;gbkey=CDS;locus_tag=HMPREF1039_0038;product=transcriptional regulator%2C DeoR family;protein_id=EGL41924.1;transl_table=11
AFIJ01000008.1	Genbank	gene	35274	36302	.	+	.	ID=gene-HMPREF1039_0039;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=HMPREF1039_0039
AFIJ01000008.1	Genbank	CDS	35274	36302	.	+	0	ID=cds-EGL41880.1;Parent=gene-HMPREF1039_0039;Dbxref=NCBI_GP:EGL41880.1;Name=EGL41880.1;Note=identified by match to protein family HMM PF02504%3B match to protein family HMM TIGR00182;gbkey=CDS;gene=plsX;locus_tag=HMPREF1039_0039;product=fatty acid/phospholipid synthesis protein PlsX;protein_id=EGL41880.1;transl_table=11
AFIJ01000008.1	Genbank	gene	36274	37287	.	+	.	ID=gene-HMPREF1039_0040;Name=fabHA;gbkey=Gene;gene=fabHA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0040
AFIJ01000008.1	Genbank	CDS	36274	37287	.	+	0	ID=cds-EGL41835.1;Parent=gene-HMPREF1039_0040;Dbxref=NCBI_GP:EGL41835.1;Name=EGL41835.1;Note=identified by match to protein family HMM PF08541%3B match to protein family HMM PF08545%3B match to protein family HMM TIGR00747;gbkey=CDS;gene=fabHA;locus_tag=HMPREF1039_0040;product=3-oxoacyl-(acyl carrier protein) synthase III;protein_id=EGL41835.1;transl_table=11
AFIJ01000008.1	Genbank	gene	37305	38246	.	+	.	ID=gene-HMPREF1039_0041;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0041
AFIJ01000008.1	Genbank	CDS	37305	38246	.	+	0	ID=cds-EGL41822.1;Parent=gene-HMPREF1039_0041;Dbxref=NCBI_GP:EGL41822.1;Name=EGL41822.1;Note=identified by match to protein family HMM PF00698%3B match to protein family HMM TIGR00128;gbkey=CDS;gene=fabD;locus_tag=HMPREF1039_0041;product=[acyl-carrier-protein] S-malonyltransferase;protein_id=EGL41822.1;transl_table=11
AFIJ01000008.1	Genbank	gene	38248	38991	.	+	.	ID=gene-HMPREF1039_0042;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0042
AFIJ01000008.1	Genbank	CDS	38248	38991	.	+	0	ID=cds-EGL41882.1;Parent=gene-HMPREF1039_0042;Dbxref=NCBI_GP:EGL41882.1;Name=EGL41882.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01370%3B match to protein family HMM PF07993%3B match to protein family HMM PF08659%3B match to protein family HMM TIGR01830;gbkey=CDS;gene=fabG;locus_tag=HMPREF1039_0042;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=EGL41882.1;transl_table=11
AFIJ01000008.1	Genbank	gene	39036	39335	.	+	.	ID=gene-HMPREF1039_0043;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=HMPREF1039_0043
AFIJ01000008.1	Genbank	CDS	39036	39335	.	+	0	ID=cds-EGL41808.1;Parent=gene-HMPREF1039_0043;Dbxref=NCBI_GP:EGL41808.1;Name=EGL41808.1;Note=identified by match to protein family HMM PF00550%3B match to protein family HMM TIGR00517;gbkey=CDS;gene=acpP;locus_tag=HMPREF1039_0043;product=acyl carrier protein;protein_id=EGL41808.1;transl_table=11
AFIJ01000008.1	Genbank	gene	39348	40310	.	+	.	ID=gene-HMPREF1039_0044;Name=HMPREF1039_0044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0044
AFIJ01000008.1	Genbank	CDS	39348	40310	.	+	0	ID=cds-EGL41801.1;Parent=gene-HMPREF1039_0044;Dbxref=NCBI_GP:EGL41801.1;Name=EGL41801.1;Note=identified by match to protein family HMM PF03060;gbkey=CDS;locus_tag=HMPREF1039_0044;product=oxidoreductase%2C 2-nitropropane dioxygenase family protein;protein_id=EGL41801.1;transl_table=11
AFIJ01000008.1	Genbank	gene	40337	41593	.	+	.	ID=gene-HMPREF1039_0045;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0045
AFIJ01000008.1	Genbank	CDS	40337	41593	.	+	0	ID=cds-EGL41889.1;Parent=gene-HMPREF1039_0045;Dbxref=NCBI_GP:EGL41889.1;Name=EGL41889.1;Note=identified by match to protein family HMM PF00109%3B match to protein family HMM PF02801%3B match to protein family HMM TIGR03150;gbkey=CDS;gene=fabF;locus_tag=HMPREF1039_0045;product=beta-ketoacyl-acyl-carrier-protein synthase II;protein_id=EGL41889.1;transl_table=11
AFIJ01000008.1	Genbank	gene	41601	42311	.	+	.	ID=gene-HMPREF1039_0046;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=HMPREF1039_0046
AFIJ01000008.1	Genbank	CDS	41601	42311	.	+	0	ID=cds-EGL41946.1;Parent=gene-HMPREF1039_0046;Dbxref=NCBI_GP:EGL41946.1;Name=EGL41946.1;Note=identified by match to protein family HMM PF00035%3B match to protein family HMM PF00636%3B match to protein family HMM TIGR02191;gbkey=CDS;gene=rnc;locus_tag=HMPREF1039_0046;product=ribonuclease III;protein_id=EGL41946.1;transl_table=11
AFIJ01000008.1	Genbank	gene	42354	43430	.	+	.	ID=gene-HMPREF1039_0047;Name=HMPREF1039_0047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0047
AFIJ01000008.1	Genbank	CDS	42354	43430	.	+	0	ID=cds-EGL41896.1;Parent=gene-HMPREF1039_0047;Dbxref=NCBI_GP:EGL41896.1;Name=EGL41896.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF1039_0047;product=putative radical SAM protein%2C TIGR01212 family;protein_id=EGL41896.1;transl_table=11
AFIJ01000008.1	Genbank	gene	43423	44178	.	+	.	ID=gene-HMPREF1039_0048;Name=HMPREF1039_0048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0048
AFIJ01000008.1	Genbank	CDS	43423	44178	.	+	0	ID=cds-EGL41895.1;Parent=gene-HMPREF1039_0048;Dbxref=NCBI_GP:EGL41895.1;Name=EGL41895.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF04397;gbkey=CDS;locus_tag=HMPREF1039_0048;product=LytTr DNA-binding domain protein;protein_id=EGL41895.1;transl_table=11
AFIJ01000008.1	Genbank	gene	44332	45738	.	+	.	ID=gene-HMPREF1039_0049;Name=HMPREF1039_0049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0049
AFIJ01000008.1	Genbank	CDS	44332	45738	.	+	0	ID=cds-EGL41944.1;Parent=gene-HMPREF1039_0049;Dbxref=NCBI_GP:EGL41944.1;Name=EGL41944.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF1039_0049;product=radical SAM domain protein;protein_id=EGL41944.1;transl_table=11
AFIJ01000008.1	Genbank	gene	45786	45959	.	+	.	ID=gene-HMPREF1039_0050;Name=HMPREF1039_0050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0050
AFIJ01000008.1	Genbank	CDS	45786	45959	.	+	0	ID=cds-EGL41898.1;Parent=gene-HMPREF1039_0050;Dbxref=NCBI_GP:EGL41898.1;Name=EGL41898.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0050;product=hypothetical protein;protein_id=EGL41898.1;transl_table=11
AFIJ01000008.1	Genbank	gene	46042	47421	.	+	.	ID=gene-HMPREF1039_0051;Name=pycB;gbkey=Gene;gene=pycB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0051
AFIJ01000008.1	Genbank	CDS	46042	47421	.	+	0	ID=cds-EGL41918.1;Parent=gene-HMPREF1039_0051;Dbxref=NCBI_GP:EGL41918.1;Name=EGL41918.1;Note=identified by match to protein family HMM PF00682%3B match to protein family HMM PF02436;gbkey=CDS;gene=pycB;locus_tag=HMPREF1039_0051;product=pyruvate carboxylase subunit B;protein_id=EGL41918.1;transl_table=11
AFIJ01000008.1	Genbank	gene	47560	48372	.	+	.	ID=gene-HMPREF1039_0052;Name=HMPREF1039_0052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0052
AFIJ01000008.1	Genbank	CDS	47560	48372	.	+	0	ID=cds-EGL41805.1;Parent=gene-HMPREF1039_0052;Dbxref=NCBI_GP:EGL41805.1;Name=EGL41805.1;Note=identified by match to protein family HMM PF00588%3B match to protein family HMM PF08032;gbkey=CDS;locus_tag=HMPREF1039_0052;product=RNA methyltransferase%2C TrmH family;protein_id=EGL41805.1;transl_table=11
AFIJ01000008.1	Genbank	gene	48381	49307	.	+	.	ID=gene-HMPREF1039_0053;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0053
AFIJ01000008.1	Genbank	CDS	48381	49307	.	+	0	ID=cds-EGL41875.1;Parent=gene-HMPREF1039_0053;Dbxref=NCBI_GP:EGL41875.1;Name=EGL41875.1;Note=identified by match to protein family HMM PF01351;gbkey=CDS;gene=rnhB;locus_tag=HMPREF1039_0053;product=ribonuclease HII;protein_id=EGL41875.1;transl_table=11
AFIJ01000008.1	Genbank	gene	49315	50163	.	+	.	ID=gene-HMPREF1039_0054;Name=HMPREF1039_0054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0054
AFIJ01000008.1	Genbank	CDS	49315	50163	.	+	0	ID=cds-EGL41816.1;Parent=gene-HMPREF1039_0054;Dbxref=NCBI_GP:EGL41816.1;Name=EGL41816.1;Note=identified by match to protein family HMM PF04794;gbkey=CDS;locus_tag=HMPREF1039_0054;product=putative hopanoid biosynthesis associated protein HpnK;protein_id=EGL41816.1;transl_table=11
AFIJ01000008.1	Genbank	gene	50176	51105	.	+	.	ID=gene-HMPREF1039_0055;Name=HMPREF1039_0055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0055
AFIJ01000008.1	Genbank	CDS	50176	51105	.	+	0	ID=cds-EGL41890.1;Parent=gene-HMPREF1039_0055;Dbxref=NCBI_GP:EGL41890.1;Name=EGL41890.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF01073%3B match to protein family HMM PF01370%3B match to protein family HMM PF02719%3B match to protein family HMM PF04321%3B match to protein family HMM PF07993;gbkey=CDS;locus_tag=HMPREF1039_0055;product=NAD dependent epimerase/dehydratase family protein;protein_id=EGL41890.1;transl_table=11
AFIJ01000008.1	Genbank	gene	51102	51551	.	+	.	ID=gene-HMPREF1039_0056;Name=HMPREF1039_0056;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0056
AFIJ01000008.1	Genbank	CDS	51102	51551	.	+	0	ID=cds-EGL41937.1;Parent=gene-HMPREF1039_0056;Dbxref=NCBI_GP:EGL41937.1;Name=EGL41937.1;Note=identified by match to protein family HMM PF01842;gbkey=CDS;locus_tag=HMPREF1039_0056;product=ACT domain protein;protein_id=EGL41937.1;transl_table=11
AFIJ01000008.1	Genbank	gene	51572	52858	.	+	.	ID=gene-HMPREF1039_0057;Name=HMPREF1039_0057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0057
AFIJ01000008.1	Genbank	CDS	51572	52858	.	+	0	ID=cds-EGL41862.1;Parent=gene-HMPREF1039_0057;Dbxref=NCBI_GP:EGL41862.1;Name=EGL41862.1;Note=identified by match to protein family HMM PF00742%3B match to protein family HMM PF01842%3B match to protein family HMM PF03447;gbkey=CDS;locus_tag=HMPREF1039_0057;product=homoserine dehydrogenase;protein_id=EGL41862.1;transl_table=11
AFIJ01000008.1	Genbank	gene	52862	53785	.	+	.	ID=gene-HMPREF1039_0058;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0058
AFIJ01000008.1	Genbank	CDS	52862	53785	.	+	0	ID=cds-EGL41926.1;Parent=gene-HMPREF1039_0058;Dbxref=NCBI_GP:EGL41926.1;Name=EGL41926.1;Note=identified by match to protein family HMM PF00288%3B match to protein family HMM PF08544%3B match to protein family HMM TIGR00191;gbkey=CDS;gene=thrB;locus_tag=HMPREF1039_0058;product=homoserine kinase;protein_id=EGL41926.1;transl_table=11
AFIJ01000008.1	Genbank	gene	53964	54719	.	+	.	ID=gene-HMPREF1039_0059;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0059
AFIJ01000008.1	Genbank	CDS	53964	54719	.	+	0	ID=cds-EGL41867.1;Parent=gene-HMPREF1039_0059;Dbxref=NCBI_GP:EGL41867.1;Name=EGL41867.1;Note=identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;gene=deoC;locus_tag=HMPREF1039_0059;product=deoxyribose-phosphate aldolase;protein_id=EGL41867.1;transl_table=11
AFIJ01000008.1	Genbank	gene	54811	55299	.	+	.	ID=gene-HMPREF1039_0060;Name=HMPREF1039_0060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0060
AFIJ01000008.1	Genbank	CDS	54811	55299	.	+	0	ID=cds-EGL41837.1;Parent=gene-HMPREF1039_0060;Dbxref=NCBI_GP:EGL41837.1;Name=EGL41837.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF01791%3B match to protein family HMM TIGR00126;gbkey=CDS;locus_tag=HMPREF1039_0060;product=putative deoxyribose-phosphate aldolase;protein_id=EGL41837.1;transl_table=11
AFIJ01000008.1	Genbank	gene	55314	55466	.	+	.	ID=gene-HMPREF1039_0061;Name=HMPREF1039_0061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0061
AFIJ01000008.1	Genbank	CDS	55314	55466	.	+	0	ID=cds-EGL41900.1;Parent=gene-HMPREF1039_0061;Dbxref=NCBI_GP:EGL41900.1;Name=EGL41900.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0061;product=hypothetical protein;protein_id=EGL41900.1;transl_table=11
AFIJ01000008.1	Genbank	gene	55456	56397	.	+	.	ID=gene-HMPREF1039_0062;Name=HMPREF1039_0062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0062
AFIJ01000008.1	Genbank	CDS	55456	56397	.	+	0	ID=cds-EGL41942.1;Parent=gene-HMPREF1039_0062;Dbxref=NCBI_GP:EGL41942.1;Name=EGL41942.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF1039_0062;product=metallo-beta-lactamase domain protein;protein_id=EGL41942.1;transl_table=11
AFIJ01000008.1	Genbank	gene	56417	57526	.	+	.	ID=gene-HMPREF1039_0063;Name=HMPREF1039_0063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0063
AFIJ01000008.1	Genbank	CDS	56417	57526	.	+	0	ID=cds-EGL41868.1;Parent=gene-HMPREF1039_0063;Dbxref=NCBI_GP:EGL41868.1;Name=EGL41868.1;Note=identified by match to protein family HMM PF00089;gbkey=CDS;locus_tag=HMPREF1039_0063;product=trypsin;protein_id=EGL41868.1;transl_table=11
AFIJ01000008.1	Genbank	gene	57523	58002	.	+	.	ID=gene-HMPREF1039_0064;Name=HMPREF1039_0064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0064
AFIJ01000008.1	Genbank	CDS	57523	58002	.	+	0	ID=cds-EGL41834.1;Parent=gene-HMPREF1039_0064;Dbxref=NCBI_GP:EGL41834.1;Name=EGL41834.1;Note=identified by match to protein family HMM PF02590;gbkey=CDS;locus_tag=HMPREF1039_0064;product=putative rRNA large subunit m3Psi methyltransferase RlmH;protein_id=EGL41834.1;transl_table=11
AFIJ01000008.1	Genbank	gene	58105	58578	.	+	.	ID=gene-HMPREF1039_0065;Name=HMPREF1039_0065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0065
AFIJ01000008.1	Genbank	CDS	58105	58578	.	+	0	ID=cds-EGL41815.1;Parent=gene-HMPREF1039_0065;Dbxref=NCBI_GP:EGL41815.1;Name=EGL41815.1;Note=identified by match to protein family HMM PF00571;gbkey=CDS;locus_tag=HMPREF1039_0065;product=CBS domain protein;protein_id=EGL41815.1;transl_table=11
AFIJ01000008.1	Genbank	gene	58794	59357	.	+	.	ID=gene-HMPREF1039_0066;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0066
AFIJ01000008.1	Genbank	CDS	58794	59357	.	+	0	ID=cds-EGL41864.1;Parent=gene-HMPREF1039_0066;Dbxref=NCBI_GP:EGL41864.1;Name=EGL41864.1;Note=identified by match to protein family HMM PF00578%3B match to protein family HMM PF08534%3B match to protein family HMM TIGR03137;gbkey=CDS;gene=ahpC;locus_tag=HMPREF1039_0066;product=peroxiredoxin;protein_id=EGL41864.1;transl_table=11
AFIJ01000008.1	Genbank	gene	59369	61021	.	+	.	ID=gene-HMPREF1039_0067;Name=HMPREF1039_0067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0067
AFIJ01000008.1	Genbank	CDS	59369	61021	.	+	0	ID=cds-EGL41928.1;Parent=gene-HMPREF1039_0067;Dbxref=NCBI_GP:EGL41928.1;Name=EGL41928.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF1039_0067;product=putative thioredoxin-disulfide reductase;protein_id=EGL41928.1;transl_table=11
AFIJ01000008.1	Genbank	gene	61101	61177	.	-	.	ID=gene-HMPREF1039_0068;Name=HMPREF1039_0068;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0068
AFIJ01000008.1	Genbank	tRNA	61101	61177	.	-	.	ID=rna-HMPREF1039_0068;Parent=gene-HMPREF1039_0068;gbkey=tRNA;locus_tag=HMPREF1039_0068;product=tRNA-Val
AFIJ01000008.1	Genbank	exon	61101	61177	.	-	.	ID=exon-HMPREF1039_0068-1;Parent=rna-HMPREF1039_0068;gbkey=tRNA;locus_tag=HMPREF1039_0068;product=tRNA-Val
AFIJ01000008.1	Genbank	gene	61267	62937	.	-	.	ID=gene-HMPREF1039_0069;Name=HMPREF1039_0069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0069
AFIJ01000008.1	Genbank	CDS	61267	62937	.	-	0	ID=cds-EGL41915.1;Parent=gene-HMPREF1039_0069;Dbxref=NCBI_GP:EGL41915.1;Name=EGL41915.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00929%3B match to protein family HMM TIGR00573;gbkey=CDS;locus_tag=HMPREF1039_0069;product=exonuclease%2C DNA polymerase III%2C epsilon subunit family;protein_id=EGL41915.1;transl_table=11
AFIJ01000008.1	Genbank	gene	62964	63875	.	-	.	ID=gene-HMPREF1039_0070;Name=HMPREF1039_0070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0070
AFIJ01000008.1	Genbank	CDS	62964	63875	.	-	0	ID=cds-EGL41876.1;Parent=gene-HMPREF1039_0070;Dbxref=NCBI_GP:EGL41876.1;Name=EGL41876.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0070;product=hypothetical protein;protein_id=EGL41876.1;transl_table=11
AFIJ01000008.1	Genbank	gene	64047	65243	.	+	.	ID=gene-HMPREF1039_0071;Name=pulE;gbkey=Gene;gene=pulE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0071
AFIJ01000008.1	Genbank	CDS	64047	65243	.	+	0	ID=cds-EGL41824.1;Parent=gene-HMPREF1039_0071;Dbxref=NCBI_GP:EGL41824.1;Name=EGL41824.1;Note=identified by match to protein family HMM PF00437;gbkey=CDS;gene=pulE;locus_tag=HMPREF1039_0071;product=type II/IV secretion system protein;protein_id=EGL41824.1;transl_table=11
AFIJ01000008.1	Genbank	gene	65206	66150	.	+	.	ID=gene-HMPREF1039_0072;Name=pilT;gbkey=Gene;gene=pilT;gene_biotype=protein_coding;locus_tag=HMPREF1039_0072
AFIJ01000008.1	Genbank	CDS	65206	66150	.	+	0	ID=cds-EGL41886.1;Parent=gene-HMPREF1039_0072;Dbxref=NCBI_GP:EGL41886.1;Name=EGL41886.1;Note=identified by match to protein family HMM PF00437;gbkey=CDS;gene=pilT;locus_tag=HMPREF1039_0072;product=twitching motility protein;protein_id=EGL41886.1;transl_table=11
AFIJ01000008.1	Genbank	gene	66147	67346	.	+	.	ID=gene-HMPREF1039_0073;Name=HMPREF1039_0073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0073
AFIJ01000008.1	Genbank	CDS	66147	67346	.	+	0	ID=cds-EGL41832.1;Parent=gene-HMPREF1039_0073;Dbxref=NCBI_GP:EGL41832.1;Name=EGL41832.1;Note=identified by match to protein family HMM PF00482;gbkey=CDS;locus_tag=HMPREF1039_0073;product=bacterial type II secretion system domain protein F;protein_id=EGL41832.1;transl_table=11
AFIJ01000008.1	Genbank	gene	67363	67770	.	+	.	ID=gene-HMPREF1039_0074;Name=HMPREF1039_0074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0074
AFIJ01000008.1	Genbank	CDS	67363	67770	.	+	0	ID=cds-EGL41932.1;Parent=gene-HMPREF1039_0074;Dbxref=NCBI_GP:EGL41932.1;Name=EGL41932.1;Note=identified by match to protein family HMM PF07963%3B match to protein family HMM TIGR02532;gbkey=CDS;locus_tag=HMPREF1039_0074;product=putative general secretion pathway protein G;protein_id=EGL41932.1;transl_table=11
AFIJ01000008.1	Genbank	gene	67793	68236	.	+	.	ID=gene-HMPREF1039_0075;Name=HMPREF1039_0075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0075
AFIJ01000008.1	Genbank	CDS	67793	68236	.	+	0	ID=cds-EGL41827.1;Parent=gene-HMPREF1039_0075;Dbxref=NCBI_GP:EGL41827.1;Name=EGL41827.1;Note=identified by match to protein family HMM PF01478;gbkey=CDS;locus_tag=HMPREF1039_0075;product=peptidase%2C A24 family;protein_id=EGL41827.1;transl_table=11
AFIJ01000008.1	Genbank	gene	68194	68661	.	+	.	ID=gene-HMPREF1039_0076;Name=HMPREF1039_0076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0076
AFIJ01000008.1	Genbank	CDS	68194	68661	.	+	0	ID=cds-EGL41841.1;Parent=gene-HMPREF1039_0076;Dbxref=NCBI_GP:EGL41841.1;Name=EGL41841.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0076;product=hypothetical protein;protein_id=EGL41841.1;transl_table=11
AFIJ01000008.1	Genbank	gene	68654	69010	.	+	.	ID=gene-HMPREF1039_0077;Name=HMPREF1039_0077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0077
AFIJ01000008.1	Genbank	CDS	68654	69010	.	+	0	ID=cds-EGL41897.1;Parent=gene-HMPREF1039_0077;Dbxref=NCBI_GP:EGL41897.1;Name=EGL41897.1;gbkey=CDS;locus_tag=HMPREF1039_0077;product=hypothetical protein;protein_id=EGL41897.1;transl_table=11
AFIJ01000008.1	Genbank	gene	69024	69509	.	+	.	ID=gene-HMPREF1039_0078;Name=HMPREF1039_0078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0078
AFIJ01000008.1	Genbank	CDS	69024	69509	.	+	0	ID=cds-EGL41840.1;Parent=gene-HMPREF1039_0078;Dbxref=NCBI_GP:EGL41840.1;Name=EGL41840.1;gbkey=CDS;locus_tag=HMPREF1039_0078;product=hypothetical protein;protein_id=EGL41840.1;transl_table=11
AFIJ01000008.1	Genbank	gene	69531	69974	.	+	.	ID=gene-HMPREF1039_0079;Name=HMPREF1039_0079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0079
AFIJ01000008.1	Genbank	CDS	69531	69974	.	+	0	ID=cds-EGL41881.1;Parent=gene-HMPREF1039_0079;Dbxref=NCBI_GP:EGL41881.1;Name=EGL41881.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0079;product=hypothetical protein;protein_id=EGL41881.1;transl_table=11
AFIJ01000008.1	Genbank	gene	69993	70757	.	+	.	ID=gene-HMPREF1039_0080;Name=HMPREF1039_0080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0080
AFIJ01000008.1	Genbank	CDS	69993	70757	.	+	0	ID=cds-EGL41929.1;Parent=gene-HMPREF1039_0080;Dbxref=NCBI_GP:EGL41929.1;Name=EGL41929.1;gbkey=CDS;locus_tag=HMPREF1039_0080;product=hypothetical protein;protein_id=EGL41929.1;transl_table=11
AFIJ01000008.1	Genbank	gene	70772	71353	.	+	.	ID=gene-HMPREF1039_0081;Name=HMPREF1039_0081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0081
AFIJ01000008.1	Genbank	CDS	70772	71353	.	+	0	ID=cds-EGL41869.1;Parent=gene-HMPREF1039_0081;Dbxref=NCBI_GP:EGL41869.1;Name=EGL41869.1;gbkey=CDS;locus_tag=HMPREF1039_0081;product=hypothetical protein;protein_id=EGL41869.1;transl_table=11
AFIJ01000008.1	Genbank	gene	71391	71765	.	+	.	ID=gene-HMPREF1039_0082;Name=HMPREF1039_0082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0082
AFIJ01000008.1	Genbank	CDS	71391	71765	.	+	0	ID=cds-EGL41845.1;Parent=gene-HMPREF1039_0082;Dbxref=NCBI_GP:EGL41845.1;Name=EGL41845.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0082;product=hypothetical protein;protein_id=EGL41845.1;transl_table=11
AFIJ01000008.1	Genbank	gene	72003	72614	.	+	.	ID=gene-HMPREF1039_0083;Name=HMPREF1039_0083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0083
AFIJ01000008.1	Genbank	CDS	72003	72614	.	+	0	ID=cds-EGL41923.1;Parent=gene-HMPREF1039_0083;Dbxref=NCBI_GP:EGL41923.1;Name=EGL41923.1;Note=identified by match to protein family HMM PF01618;gbkey=CDS;locus_tag=HMPREF1039_0083;product=transporter%2C MotA/TolQ/ExbB proton channel family protein;protein_id=EGL41923.1;transl_table=11
AFIJ01000008.1	Genbank	gene	72626	73030	.	+	.	ID=gene-HMPREF1039_0084;Name=HMPREF1039_0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0084
AFIJ01000008.1	Genbank	CDS	72626	73030	.	+	0	ID=cds-EGL41849.1;Parent=gene-HMPREF1039_0084;Dbxref=NCBI_GP:EGL41849.1;Name=EGL41849.1;Note=identified by match to protein family HMM PF02472;gbkey=CDS;locus_tag=HMPREF1039_0084;product=transport energizing protein%2C ExbD/TolR family;protein_id=EGL41849.1;transl_table=11
AFIJ01000008.1	Genbank	gene	73038	73829	.	+	.	ID=gene-HMPREF1039_0085;Name=HMPREF1039_0085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0085
AFIJ01000008.1	Genbank	CDS	73038	73829	.	+	0	ID=cds-EGL41934.1;Parent=gene-HMPREF1039_0085;Dbxref=NCBI_GP:EGL41934.1;Name=EGL41934.1;Note=identified by match to protein family HMM TIGR01352;gbkey=CDS;locus_tag=HMPREF1039_0085;product=TonB family domain protein;protein_id=EGL41934.1;transl_table=11
AFIJ01000008.1	Genbank	gene	73974	74492	.	+	.	ID=gene-HMPREF1039_0086;Name=HMPREF1039_0086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0086
AFIJ01000008.1	Genbank	CDS	73974	74492	.	+	0	ID=cds-EGL41922.1;Parent=gene-HMPREF1039_0086;Dbxref=NCBI_GP:EGL41922.1;Name=EGL41922.1;gbkey=CDS;locus_tag=HMPREF1039_0086;product=flavodoxin family protein;protein_id=EGL41922.1;transl_table=11
AFIJ01000008.1	Genbank	gene	74505	76184	.	+	.	ID=gene-HMPREF1039_0087;Name=HMPREF1039_0087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0087
AFIJ01000008.1	Genbank	CDS	74505	76184	.	+	0	ID=cds-EGL41865.1;Parent=gene-HMPREF1039_0087;Dbxref=NCBI_GP:EGL41865.1;Name=EGL41865.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF1039_0087;product=radical SAM domain protein;protein_id=EGL41865.1;transl_table=11
AFIJ01000008.1	Genbank	gene	76563	77900	.	+	.	ID=gene-HMPREF1039_0088;Name=noxE;gbkey=Gene;gene=noxE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0088
AFIJ01000008.1	Genbank	CDS	76563	77900	.	+	0	ID=cds-EGL41909.1;Parent=gene-HMPREF1039_0088;Dbxref=NCBI_GP:EGL41909.1;Name=EGL41909.1;Note=identified by match to protein family HMM PF00070%3B match to protein family HMM PF02852%3B match to protein family HMM PF07992;gbkey=CDS;gene=noxE;locus_tag=HMPREF1039_0088;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EGL41909.1;transl_table=11
AFIJ01000008.1	Genbank	gene	77886	78032	.	-	.	ID=gene-HMPREF1039_0089;Name=HMPREF1039_0089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0089
AFIJ01000008.1	Genbank	CDS	77886	78032	.	-	0	ID=cds-EGL41939.1;Parent=gene-HMPREF1039_0089;Dbxref=NCBI_GP:EGL41939.1;Name=EGL41939.1;gbkey=CDS;locus_tag=HMPREF1039_0089;product=hypothetical protein;protein_id=EGL41939.1;transl_table=11
AFIJ01000008.1	Genbank	sequence_feature	78070	78310	.	+	.	ID=id-AFIJ01000008.1:78070..78310;Note=T-box leader;gbkey=misc_feature
AFIJ01000008.1	Genbank	gene	78408	79418	.	+	.	ID=gene-HMPREF1039_0091;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0091
AFIJ01000008.1	Genbank	CDS	78408	79418	.	+	0	ID=cds-EGL41892.1;Parent=gene-HMPREF1039_0091;Dbxref=NCBI_GP:EGL41892.1;Name=EGL41892.1;Note=identified by match to protein family HMM PF01450%3B match to protein family HMM PF02629%3B match to protein family HMM PF07991%3B match to protein family HMM TIGR00465;gbkey=CDS;gene=ilvC;locus_tag=HMPREF1039_0091;product=ketol-acid reductoisomerase;protein_id=EGL41892.1;transl_table=11
AFIJ01000008.1	Genbank	gene	79507	81207	.	+	.	ID=gene-HMPREF1039_0092;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0092
AFIJ01000008.1	Genbank	CDS	79507	81207	.	+	0	ID=cds-EGL41858.1;Parent=gene-HMPREF1039_0092;Dbxref=NCBI_GP:EGL41858.1;Name=EGL41858.1;Note=identified by match to protein family HMM PF00205%3B match to protein family HMM PF02775%3B match to protein family HMM PF02776%3B match to protein family HMM TIGR00118;gbkey=CDS;gene=ilvB;locus_tag=HMPREF1039_0092;product=acetolactate synthase%2C large subunit%2C biosynthetic type;protein_id=EGL41858.1;transl_table=11
AFIJ01000008.1	Genbank	gene	81204	81704	.	+	.	ID=gene-HMPREF1039_0093;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=HMPREF1039_0093
AFIJ01000008.1	Genbank	CDS	81204	81704	.	+	0	ID=cds-EGL41872.1;Parent=gene-HMPREF1039_0093;Dbxref=NCBI_GP:EGL41872.1;Name=EGL41872.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM TIGR00119;gbkey=CDS;gene=ilvN;locus_tag=HMPREF1039_0093;product=acetolactate synthase%2C small subunit;protein_id=EGL41872.1;transl_table=11
AFIJ01000008.1	Genbank	gene	81725	83377	.	+	.	ID=gene-HMPREF1039_0094;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0094
AFIJ01000008.1	Genbank	CDS	81725	83377	.	+	0	ID=cds-EGL41811.1;Parent=gene-HMPREF1039_0094;Dbxref=NCBI_GP:EGL41811.1;Name=EGL41811.1;Note=identified by match to protein family HMM PF00920%3B match to protein family HMM TIGR00110;gbkey=CDS;gene=ilvD;locus_tag=HMPREF1039_0094;product=dihydroxy-acid dehydratase;protein_id=EGL41811.1;transl_table=11
AFIJ01000008.1	Genbank	gene	83331	83486	.	+	.	ID=gene-HMPREF1039_0095;Name=HMPREF1039_0095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0095
AFIJ01000008.1	Genbank	CDS	83331	83486	.	+	0	ID=cds-EGL41848.1;Parent=gene-HMPREF1039_0095;Dbxref=NCBI_GP:EGL41848.1;Name=EGL41848.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0095;product=hypothetical protein;protein_id=EGL41848.1;transl_table=11
AFIJ01000008.1	Genbank	sequence_feature	83522	83726	.	+	.	ID=id-AFIJ01000008.1:83522..83726;Note=T-box leader;gbkey=misc_feature
AFIJ01000008.1	Genbank	gene	83769	86429	.	+	.	ID=gene-HMPREF1039_0097;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0097
AFIJ01000008.1	Genbank	CDS	83769	86429	.	+	0	ID=cds-EGL41914.1;Parent=gene-HMPREF1039_0097;Dbxref=NCBI_GP:EGL41914.1;Name=EGL41914.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00422;gbkey=CDS;gene=valS;locus_tag=HMPREF1039_0097;product=valine--tRNA ligase;protein_id=EGL41914.1;transl_table=11
AFIJ01000008.1	Genbank	gene	86442	87746	.	+	.	ID=gene-HMPREF1039_0098;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0098
AFIJ01000008.1	Genbank	CDS	86442	87746	.	+	0	ID=cds-EGL41800.1;Parent=gene-HMPREF1039_0098;Dbxref=NCBI_GP:EGL41800.1;Name=EGL41800.1;Note=identified by match to protein family HMM PF02875%3B match to protein family HMM PF08245%3B match to protein family HMM TIGR01499;gbkey=CDS;gene=folC;locus_tag=HMPREF1039_0098;product=bifunctional protein FolC;protein_id=EGL41800.1;transl_table=11
AFIJ01000008.1	Genbank	gene	87943	88305	.	+	.	ID=gene-HMPREF1039_0099;Name=HMPREF1039_0099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0099
AFIJ01000008.1	Genbank	CDS	87943	88305	.	+	0	ID=cds-EGL41931.1;Parent=gene-HMPREF1039_0099;Dbxref=NCBI_GP:EGL41931.1;Name=EGL41931.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0099;product=hypothetical protein;protein_id=EGL41931.1;transl_table=11
AFIJ01000008.1	Genbank	gene	88286	88429	.	-	.	ID=gene-HMPREF1039_0100;Name=HMPREF1039_0100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0100
AFIJ01000008.1	Genbank	CDS	88286	88429	.	-	0	ID=cds-EGL41906.1;Parent=gene-HMPREF1039_0100;Dbxref=NCBI_GP:EGL41906.1;Name=EGL41906.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0100;product=hypothetical protein;protein_id=EGL41906.1;transl_table=11
AFIJ01000008.1	Genbank	gene	88446	89711	.	+	.	ID=gene-HMPREF1039_0101;Name=HMPREF1039_0101;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0101
AFIJ01000008.1	Genbank	CDS	88446	89711	.	+	0	ID=cds-EGL41883.1;Parent=gene-HMPREF1039_0101;Dbxref=NCBI_GP:EGL41883.1;Name=EGL41883.1;Note=identified by match to protein family HMM PF04932;gbkey=CDS;locus_tag=HMPREF1039_0101;product=O-antigen polymerase;protein_id=EGL41883.1;transl_table=11
AFIJ01000008.1	Genbank	gene	89791	90456	.	+	.	ID=gene-HMPREF1039_0102;Name=HMPREF1039_0102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0102
AFIJ01000008.1	Genbank	CDS	89791	90456	.	+	0	ID=cds-EGL41948.1;Parent=gene-HMPREF1039_0102;Dbxref=NCBI_GP:EGL41948.1;Name=EGL41948.1;Note=identified by match to protein family HMM PF02629%3B match to protein family HMM PF06971;gbkey=CDS;locus_tag=HMPREF1039_0102;product=CoA binding domain protein;protein_id=EGL41948.1;transl_table=11
AFIJ01000008.1	Genbank	gene	90596	91036	.	+	.	ID=gene-HMPREF1039_0103;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=HMPREF1039_0103
AFIJ01000008.1	Genbank	CDS	90596	91036	.	+	0	ID=cds-EGL41813.1;Parent=gene-HMPREF1039_0103;Dbxref=NCBI_GP:EGL41813.1;Name=EGL41813.1;Note=identified by match to protein family HMM PF00572%3B match to protein family HMM TIGR01066;gbkey=CDS;gene=rplM;locus_tag=HMPREF1039_0103;product=ribosomal protein L13;protein_id=EGL41813.1;transl_table=11
AFIJ01000008.1	Genbank	gene	91055	91450	.	+	.	ID=gene-HMPREF1039_0104;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=HMPREF1039_0104
AFIJ01000008.1	Genbank	CDS	91055	91450	.	+	0	ID=cds-EGL41856.1;Parent=gene-HMPREF1039_0104;Dbxref=NCBI_GP:EGL41856.1;Name=EGL41856.1;Note=identified by match to protein family HMM PF00380;gbkey=CDS;gene=rpsI;locus_tag=HMPREF1039_0104;product=ribosomal protein S9;protein_id=EGL41856.1;transl_table=11
AFIJ01000008.1	Genbank	gene	91661	93196	.	+	.	ID=gene-HMPREF1039_0105;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0105
AFIJ01000008.1	Genbank	CDS	91661	93196	.	+	0	ID=cds-EGL41933.1;Parent=gene-HMPREF1039_0105;Dbxref=NCBI_GP:EGL41933.1;Name=EGL41933.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF00958%3B match to protein family HMM TIGR00884%3B match to protein family HMM TIGR00888;gbkey=CDS;gene=guaA;locus_tag=HMPREF1039_0105;product=GMP synthase (glutamine-hydrolyzing) domain protein;protein_id=EGL41933.1;transl_table=11
AFIJ01000008.1	Genbank	gene	93481	94812	.	+	.	ID=gene-HMPREF1039_0106;Name=HMPREF1039_0106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0106
AFIJ01000008.1	Genbank	CDS	93481	94812	.	+	0	ID=cds-EGL41842.1;Parent=gene-HMPREF1039_0106;Dbxref=NCBI_GP:EGL41842.1;Name=EGL41842.1;Note=identified by match to protein family HMM PF04326;gbkey=CDS;locus_tag=HMPREF1039_0106;product=divergent AAA domain protein;protein_id=EGL41842.1;transl_table=11
AFIJ01000008.1	Genbank	gene	95247	96821	.	+	.	ID=gene-HMPREF1039_0107;Name=HMPREF1039_0107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0107
AFIJ01000008.1	Genbank	CDS	95247	96821	.	+	0	ID=cds-EGL41917.1;Parent=gene-HMPREF1039_0107;Dbxref=NCBI_GP:EGL41917.1;Name=EGL41917.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0107;product=hypothetical protein;protein_id=EGL41917.1;transl_table=11
AFIJ01000008.1	Genbank	gene	96808	101121	.	+	.	ID=gene-HMPREF1039_0108;Name=HMPREF1039_0108;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0108
AFIJ01000008.1	Genbank	CDS	96808	101121	.	+	0	ID=cds-EGL41852.1;Parent=gene-HMPREF1039_0108;Dbxref=NCBI_GP:EGL41852.1;Name=EGL41852.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0108;product=hypothetical protein;protein_id=EGL41852.1;transl_table=11
AFIJ01000008.1	Genbank	gene	102473	103306	.	+	.	ID=gene-HMPREF1039_0109;Name=HMPREF1039_0109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0109
AFIJ01000008.1	Genbank	CDS	102473	103306	.	+	0	ID=cds-EGL41945.1;Parent=gene-HMPREF1039_0109;Dbxref=NCBI_GP:EGL41945.1;Name=EGL41945.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00589;gbkey=CDS;locus_tag=HMPREF1039_0109;product=site-specific recombinase%2C phage integrase family;protein_id=EGL41945.1;transl_table=11
AFIJ01000008.1	Genbank	gene	103467	103661	.	+	.	ID=gene-HMPREF1039_0110;Name=HMPREF1039_0110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0110
AFIJ01000008.1	Genbank	CDS	103467	103661	.	+	0	ID=cds-EGL41887.1;Parent=gene-HMPREF1039_0110;Dbxref=NCBI_GP:EGL41887.1;Name=EGL41887.1;gbkey=CDS;locus_tag=HMPREF1039_0110;product=hypothetical protein;protein_id=EGL41887.1;transl_table=11
AFIJ01000008.1	Genbank	gene	103809	103964	.	+	.	ID=gene-HMPREF1039_0111;Name=HMPREF1039_0111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0111
AFIJ01000008.1	Genbank	CDS	103809	103964	.	+	0	ID=cds-EGL41871.1;Parent=gene-HMPREF1039_0111;Dbxref=NCBI_GP:EGL41871.1;Name=EGL41871.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0111;product=hypothetical protein;protein_id=EGL41871.1;transl_table=11
AFIJ01000008.1	Genbank	gene	104071	105261	.	+	.	ID=gene-HMPREF1039_0112;Name=HMPREF1039_0112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0112
AFIJ01000008.1	Genbank	CDS	104071	105261	.	+	0	ID=cds-EGL41927.1;Parent=gene-HMPREF1039_0112;Dbxref=NCBI_GP:EGL41927.1;Name=EGL41927.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF05272;gbkey=CDS;locus_tag=HMPREF1039_0112;product=Virulence-associated protein E;protein_id=EGL41927.1;transl_table=11
AFIJ01000008.1	Genbank	gene	105599	105892	.	+	.	ID=gene-HMPREF1039_0113;Name=HMPREF1039_0113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0113
AFIJ01000008.1	Genbank	CDS	105599	105892	.	+	0	ID=cds-EGL41804.1;Parent=gene-HMPREF1039_0113;Dbxref=NCBI_GP:EGL41804.1;Name=EGL41804.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts;gbkey=CDS;locus_tag=HMPREF1039_0113;product=hypothetical protein;protein_id=EGL41804.1;transl_table=11
AFIJ01000008.1	Genbank	gene	106107	107486	.	-	.	ID=gene-HMPREF1039_0114;Name=HMPREF1039_0114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0114
AFIJ01000008.1	Genbank	CDS	106107	107486	.	-	0	ID=cds-EGL41943.1;Parent=gene-HMPREF1039_0114;Dbxref=NCBI_GP:EGL41943.1;Name=EGL41943.1;Note=identified by match to protein family HMM PF00512%3B match to protein family HMM PF02518;gbkey=CDS;locus_tag=HMPREF1039_0114;product=ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein;protein_id=EGL41943.1;transl_table=11
AFIJ01000008.1	Genbank	gene	107477	108136	.	-	.	ID=gene-HMPREF1039_0115;Name=spaR;gbkey=Gene;gene=spaR;gene_biotype=protein_coding;locus_tag=HMPREF1039_0115
AFIJ01000008.1	Genbank	CDS	107477	108136	.	-	0	ID=cds-EGL41911.1;Parent=gene-HMPREF1039_0115;Dbxref=NCBI_GP:EGL41911.1;Name=EGL41911.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;gene=spaR;locus_tag=HMPREF1039_0115;product=response regulator receiver domain protein;protein_id=EGL41911.1;transl_table=11
AFIJ01000008.1	Genbank	gene	108169	108909	.	-	.	ID=gene-HMPREF1039_0116;Name=mutG;gbkey=Gene;gene=mutG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0116
AFIJ01000008.1	Genbank	CDS	108169	108909	.	-	0	ID=cds-EGL41828.1;Parent=gene-HMPREF1039_0116;Dbxref=NCBI_GP:EGL41828.1;Name=EGL41828.1;Note=identified by match to protein family HMM TIGR03733;gbkey=CDS;gene=mutG;locus_tag=HMPREF1039_0116;product=antibiotic ABC transporter protein MutG;protein_id=EGL41828.1;transl_table=11
AFIJ01000008.1	Genbank	gene	108909	109649	.	-	.	ID=gene-HMPREF1039_0117;Name=HMPREF1039_0117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0117
AFIJ01000008.1	Genbank	CDS	108909	109649	.	-	0	ID=cds-EGL41809.1;Parent=gene-HMPREF1039_0117;Dbxref=NCBI_GP:EGL41809.1;Name=EGL41809.1;Note=identified by match to protein family HMM TIGR03732;gbkey=CDS;locus_tag=HMPREF1039_0117;product=lantibiotic protection ABC transporter permease subunit%2C MutE/EpiE family;protein_id=EGL41809.1;transl_table=11
AFIJ01000008.1	Genbank	gene	109653	110354	.	-	.	ID=gene-HMPREF1039_0118;Name=mutF;gbkey=Gene;gene=mutF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0118
AFIJ01000008.1	Genbank	CDS	109653	110354	.	-	0	ID=cds-EGL41861.1;Parent=gene-HMPREF1039_0118;Dbxref=NCBI_GP:EGL41861.1;Name=EGL41861.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR03740;gbkey=CDS;gene=mutF;locus_tag=HMPREF1039_0118;product=mutacin ABC transporter%2C ATP-binding protein MutF;protein_id=EGL41861.1;transl_table=11
AFIJ01000008.1	Genbank	gene	110981	111157	.	+	.	ID=gene-HMPREF1039_0119;Name=HMPREF1039_0119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0119
AFIJ01000008.1	Genbank	CDS	110981	111157	.	+	0	ID=cds-EGL41910.1;Parent=gene-HMPREF1039_0119;Dbxref=NCBI_GP:EGL41910.1;Name=EGL41910.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0119;product=hypothetical protein;protein_id=EGL41910.1;transl_table=11
AFIJ01000008.1	Genbank	gene	111392	112393	.	+	.	ID=gene-HMPREF1039_0120;Name=hpaIIM;gbkey=Gene;gene=hpaIIM;gene_biotype=protein_coding;locus_tag=HMPREF1039_0120
AFIJ01000008.1	Genbank	CDS	111392	112393	.	+	0	ID=cds-EGL41839.1;Parent=gene-HMPREF1039_0120;Dbxref=NCBI_GP:EGL41839.1;Name=EGL41839.1;Note=identified by match to protein family HMM PF00145%3B match to protein family HMM TIGR00675;gbkey=CDS;gene=hpaIIM;locus_tag=HMPREF1039_0120;product=modification methylase HpaII;protein_id=EGL41839.1;transl_table=11
AFIJ01000008.1	Genbank	gene	112615	112691	.	+	.	ID=gene-HMPREF1039_0121;Name=HMPREF1039_0121;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0121
AFIJ01000008.1	Genbank	tRNA	112615	112691	.	+	.	ID=rna-HMPREF1039_0121;Parent=gene-HMPREF1039_0121;gbkey=tRNA;locus_tag=HMPREF1039_0121;product=tRNA-Arg
AFIJ01000008.1	Genbank	exon	112615	112691	.	+	.	ID=exon-HMPREF1039_0121-1;Parent=rna-HMPREF1039_0121;gbkey=tRNA;locus_tag=HMPREF1039_0121;product=tRNA-Arg
AFIJ01000008.1	Genbank	gene	113010	113483	.	-	.	ID=gene-HMPREF1039_0122;Name=HMPREF1039_0122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0122
AFIJ01000008.1	Genbank	CDS	113010	113483	.	-	0	ID=cds-EGL41912.1;Parent=gene-HMPREF1039_0122;Dbxref=NCBI_GP:EGL41912.1;Name=EGL41912.1;Note=identified by match to protein family HMM PF00383;gbkey=CDS;locus_tag=HMPREF1039_0122;product=cytidine and deoxycytidylate deaminase zinc-binding region;protein_id=EGL41912.1;transl_table=11
AFIJ01000008.1	Genbank	gene	113602	114276	.	+	.	ID=gene-HMPREF1039_0123;Name=HMPREF1039_0123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0123
AFIJ01000008.1	Genbank	CDS	113602	114276	.	+	0	ID=cds-EGL41870.1;Parent=gene-HMPREF1039_0123;Dbxref=NCBI_GP:EGL41870.1;Name=EGL41870.1;Note=identified by match to protein family HMM PF03458;gbkey=CDS;locus_tag=HMPREF1039_0123;product=hypothetical protein;protein_id=EGL41870.1;transl_table=11
AFIJ01000008.1	Genbank	gene	114291	116132	.	+	.	ID=gene-HMPREF1039_0124;Name=HMPREF1039_0124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0124
AFIJ01000008.1	Genbank	CDS	114291	116132	.	+	0	ID=cds-EGL41829.1;Parent=gene-HMPREF1039_0124;Dbxref=NCBI_GP:EGL41829.1;Name=EGL41829.1;gbkey=CDS;locus_tag=HMPREF1039_0124;product=hypothetical protein;protein_id=EGL41829.1;transl_table=11
AFIJ01000008.1	Genbank	gene	116500	116946	.	+	.	ID=gene-HMPREF1039_0125;Name=HMPREF1039_0125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0125
AFIJ01000008.1	Genbank	CDS	116500	116946	.	+	0	ID=cds-EGL41888.1;Parent=gene-HMPREF1039_0125;Dbxref=NCBI_GP:EGL41888.1;Name=EGL41888.1;Note=identified by match to protein family HMM PF09424;gbkey=CDS;locus_tag=HMPREF1039_0125;product=YqeY-like protein;protein_id=EGL41888.1;transl_table=11
AFIJ01000008.1	Genbank	gene	117095	118996	.	+	.	ID=gene-HMPREF1039_0126;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0126
AFIJ01000008.1	Genbank	CDS	117095	118996	.	+	0	ID=cds-EGL41879.1;Parent=gene-HMPREF1039_0126;Dbxref=NCBI_GP:EGL41879.1;Name=EGL41879.1;Note=identified by match to protein family HMM PF00120;gbkey=CDS;gene=glnA;locus_tag=HMPREF1039_0126;product=glutamate--ammonia ligase%2C catalytic domain protein;protein_id=EGL41879.1;transl_table=11
AFIJ01000008.1	Genbank	gene	119154	119267	.	+	.	ID=gene-HMPREF1039_0127;Name=HMPREF1039_0127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0127
AFIJ01000008.1	Genbank	CDS	119154	119267	.	+	0	ID=cds-EGL41878.1;Parent=gene-HMPREF1039_0127;Dbxref=NCBI_GP:EGL41878.1;Name=EGL41878.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0127;product=hypothetical protein;protein_id=EGL41878.1;transl_table=11
AFIJ01000008.1	Genbank	gene	119264	120940	.	+	.	ID=gene-HMPREF1039_0128;Name=fhs;gbkey=Gene;gene=fhs;gene_biotype=protein_coding;locus_tag=HMPREF1039_0128
AFIJ01000008.1	Genbank	CDS	119264	120940	.	+	0	ID=cds-EGL41940.1;Parent=gene-HMPREF1039_0128;Dbxref=NCBI_GP:EGL41940.1;Name=EGL41940.1;Note=identified by match to protein family HMM PF01268;gbkey=CDS;gene=fhs;locus_tag=HMPREF1039_0128;product=formate--tetrahydrofolate ligase;protein_id=EGL41940.1;transl_table=11
AFIJ01000008.1	Genbank	gene	120940	121563	.	+	.	ID=gene-HMPREF1039_0129;Name=HMPREF1039_0129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0129
AFIJ01000008.1	Genbank	CDS	120940	121563	.	+	0	ID=cds-EGL41949.1;Parent=gene-HMPREF1039_0129;Dbxref=NCBI_GP:EGL41949.1;Name=EGL41949.1;Note=identified by match to protein family HMM PF04961;gbkey=CDS;locus_tag=HMPREF1039_0129;product=Formiminotransferase-cyclodeaminase;protein_id=EGL41949.1;transl_table=11
AFIJ01000008.1	Genbank	gene	121548	121691	.	-	.	ID=gene-HMPREF1039_0130;Name=HMPREF1039_0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0130
AFIJ01000008.1	Genbank	CDS	121548	121691	.	-	0	ID=cds-EGL41854.1;Parent=gene-HMPREF1039_0130;Dbxref=NCBI_GP:EGL41854.1;Name=EGL41854.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0130;product=hypothetical protein;protein_id=EGL41854.1;transl_table=11
AFIJ01000008.1	Genbank	gene	121761	122015	.	-	.	ID=gene-HMPREF1039_0131;Name=HMPREF1039_0131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0131
AFIJ01000008.1	Genbank	CDS	121761	122015	.	-	0	ID=cds-EGL41907.1;Parent=gene-HMPREF1039_0131;Dbxref=NCBI_GP:EGL41907.1;Name=EGL41907.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0131;product=hypothetical protein;protein_id=EGL41907.1;transl_table=11
AFIJ01000008.1	Genbank	gene	122328	122627	.	+	.	ID=gene-HMPREF1039_0132;Name=HMPREF1039_0132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0132
AFIJ01000008.1	Genbank	CDS	122328	122627	.	+	0	ID=cds-EGL41802.1;Parent=gene-HMPREF1039_0132;Dbxref=NCBI_GP:EGL41802.1;Name=EGL41802.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF1039_0132;product=hypothetical protein;protein_id=EGL41802.1;transl_table=11
AFIJ01000008.1	Genbank	gene	123095	123238	.	+	.	ID=gene-HMPREF1039_0133;Name=HMPREF1039_0133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0133
AFIJ01000008.1	Genbank	CDS	123095	123238	.	+	0	ID=cds-EGL41877.1;Parent=gene-HMPREF1039_0133;Dbxref=NCBI_GP:EGL41877.1;Name=EGL41877.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0133;product=hypothetical protein;protein_id=EGL41877.1;transl_table=11
AFIJ01000008.1	Genbank	gene	123372	123578	.	-	.	ID=gene-HMPREF1039_0135;Name=HMPREF1039_0135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0135
AFIJ01000008.1	Genbank	CDS	123372	123578	.	-	0	ID=cds-EGL41810.1;Parent=gene-HMPREF1039_0135;Dbxref=NCBI_GP:EGL41810.1;Name=EGL41810.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0135;product=hypothetical protein;protein_id=EGL41810.1;transl_table=11
AFIJ01000008.1	Genbank	gene	123550	123864	.	+	.	ID=gene-HMPREF1039_0134;Name=HMPREF1039_0134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0134
AFIJ01000008.1	Genbank	CDS	123550	123864	.	+	0	ID=cds-EGL41851.1;Parent=gene-HMPREF1039_0134;Dbxref=NCBI_GP:EGL41851.1;Name=EGL41851.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF1039_0134;product=hypothetical protein;protein_id=EGL41851.1;transl_table=11
AFIJ01000008.1	Genbank	gene	124009	124308	.	+	.	ID=gene-HMPREF1039_0136;Name=HMPREF1039_0136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0136
AFIJ01000008.1	Genbank	CDS	124009	124308	.	+	0	ID=cds-EGL41812.1;Parent=gene-HMPREF1039_0136;Dbxref=NCBI_GP:EGL41812.1;Name=EGL41812.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF1039_0136;product=hypothetical protein;protein_id=EGL41812.1;transl_table=11
AFIJ01000008.1	Genbank	gene	124305	124580	.	-	.	ID=gene-HMPREF1039_0137;Name=HMPREF1039_0137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0137
AFIJ01000008.1	Genbank	CDS	124305	124580	.	-	0	ID=cds-EGL41823.1;Parent=gene-HMPREF1039_0137;Dbxref=NCBI_GP:EGL41823.1;Name=EGL41823.1;Note=identified by match to protein family HMM TIGR02385;gbkey=CDS;locus_tag=HMPREF1039_0137;product=addiction module toxin%2C RelE/StbE family;protein_id=EGL41823.1;transl_table=11
AFIJ01000008.1	Genbank	gene	124573	124842	.	-	.	ID=gene-HMPREF1039_0138;Name=HMPREF1039_0138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0138
AFIJ01000008.1	Genbank	CDS	124573	124842	.	-	0	ID=cds-EGL41884.1;Parent=gene-HMPREF1039_0138;Dbxref=NCBI_GP:EGL41884.1;Name=EGL41884.1;Note=identified by match to protein family HMM PF04221%3B match to protein family HMM TIGR02384;gbkey=CDS;locus_tag=HMPREF1039_0138;product=addiction module antitoxin%2C RelB/DinJ family;protein_id=EGL41884.1;transl_table=11
AFIJ01000008.1	Genbank	gene	124929	125108	.	+	.	ID=gene-HMPREF1039_0139;Name=HMPREF1039_0139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0139
AFIJ01000008.1	Genbank	CDS	124929	125108	.	+	0	ID=cds-EGL41847.1;Parent=gene-HMPREF1039_0139;Dbxref=NCBI_GP:EGL41847.1;Name=EGL41847.1;gbkey=CDS;locus_tag=HMPREF1039_0139;product=prophage LambdaSa04%2C portal protein%2C HK97 family;protein_id=EGL41847.1;transl_table=11
AFIJ01000008.1	Genbank	gene	125230	128382	.	-	.	ID=gene-HMPREF1039_0140;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=HMPREF1039_0140
AFIJ01000008.1	Genbank	CDS	125230	128382	.	-	0	ID=cds-EGL41941.1;Parent=gene-HMPREF1039_0140;Dbxref=NCBI_GP:EGL41941.1;Name=EGL41941.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF04313%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00348;gbkey=CDS;gene=hsdR;locus_tag=HMPREF1039_0140;product=type I site-specific deoxyribonuclease%2C HsdR family;protein_id=EGL41941.1;transl_table=11
AFIJ01000008.1	Genbank	gene	128372	129544	.	-	.	ID=gene-HMPREF1039_0141;Name=HMPREF1039_0141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0141
AFIJ01000008.1	Genbank	CDS	128372	129544	.	-	0	ID=cds-EGL41899.1;Parent=gene-HMPREF1039_0141;Dbxref=NCBI_GP:EGL41899.1;Name=EGL41899.1;gbkey=CDS;locus_tag=HMPREF1039_0141;product=hypothetical protein;protein_id=EGL41899.1;transl_table=11
AFIJ01000008.1	Genbank	gene	129547	130764	.	-	.	ID=gene-HMPREF1039_0142;Name=HMPREF1039_0142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0142
AFIJ01000008.1	Genbank	CDS	129547	130764	.	-	0	ID=cds-EGL41825.1;Parent=gene-HMPREF1039_0142;Dbxref=NCBI_GP:EGL41825.1;Name=EGL41825.1;Note=identified by match to protein family HMM PF01420;gbkey=CDS;locus_tag=HMPREF1039_0142;product=type I restriction modification DNA specificity domain protein;protein_id=EGL41825.1;transl_table=11
AFIJ01000008.1	Genbank	gene	130761	132581	.	-	.	ID=gene-HMPREF1039_0143;Name=HMPREF1039_0143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0143
AFIJ01000008.1	Genbank	CDS	130761	132581	.	-	0	ID=cds-EGL41891.1;Parent=gene-HMPREF1039_0143;Dbxref=NCBI_GP:EGL41891.1;Name=EGL41891.1;Note=identified by match to protein family HMM PF02384;gbkey=CDS;locus_tag=HMPREF1039_0143;product=N-6 DNA Methylase;protein_id=EGL41891.1;transl_table=11
AFIJ01000008.1	Genbank	gene	132583	132792	.	-	.	ID=gene-HMPREF1039_0144;Name=HMPREF1039_0144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0144
AFIJ01000008.1	Genbank	CDS	132583	132792	.	-	0	ID=cds-EGL41913.1;Parent=gene-HMPREF1039_0144;Dbxref=NCBI_GP:EGL41913.1;Name=EGL41913.1;gbkey=CDS;locus_tag=HMPREF1039_0144;product=hypothetical protein;protein_id=EGL41913.1;transl_table=11
AFIJ01000008.1	Genbank	gene	133087	134193	.	-	.	ID=gene-HMPREF1039_0145;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0145
AFIJ01000008.1	Genbank	CDS	133087	134193	.	-	0	ID=cds-EGL41925.1;Parent=gene-HMPREF1039_0145;Dbxref=NCBI_GP:EGL41925.1;Name=EGL41925.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF06071%3B match to protein family HMM TIGR00092;gbkey=CDS;gene=ychF;locus_tag=HMPREF1039_0145;product=GTP-binding protein YchF;protein_id=EGL41925.1;transl_table=11
AFIJ01000008.1	Genbank	gene	134207	135448	.	-	.	ID=gene-HMPREF1039_0146;Name=HMPREF1039_0146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0146
AFIJ01000008.1	Genbank	CDS	134207	135448	.	-	0	ID=cds-EGL41826.1;Parent=gene-HMPREF1039_0146;Dbxref=NCBI_GP:EGL41826.1;Name=EGL41826.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM TIGR03542;gbkey=CDS;locus_tag=HMPREF1039_0146;product=LL-diaminopimelate aminotransferase;protein_id=EGL41826.1;transl_table=11
AFIJ01000008.1	Genbank	gene	135595	136788	.	-	.	ID=gene-HMPREF1039_0147;Name=HMPREF1039_0147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0147
AFIJ01000008.1	Genbank	CDS	135595	136788	.	-	0	ID=cds-EGL41833.1;Parent=gene-HMPREF1039_0147;Dbxref=NCBI_GP:EGL41833.1;Name=EGL41833.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF1039_0147;product=efflux ABC transporter%2C permease protein;protein_id=EGL41833.1;transl_table=11
AFIJ01000008.1	Genbank	gene	136802	137509	.	-	.	ID=gene-HMPREF1039_0148;Name=HMPREF1039_0148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0148
AFIJ01000008.1	Genbank	CDS	136802	137509	.	-	0	ID=cds-EGL41844.1;Parent=gene-HMPREF1039_0148;Dbxref=NCBI_GP:EGL41844.1;Name=EGL41844.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0148;product=ABC transporter%2C ATP-binding protein;protein_id=EGL41844.1;transl_table=11
AFIJ01000008.1	Genbank	gene	137519	138619	.	-	.	ID=gene-HMPREF1039_0149;Name=HMPREF1039_0149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0149
AFIJ01000008.1	Genbank	CDS	137519	138619	.	-	0	ID=cds-EGL41818.1;Parent=gene-HMPREF1039_0149;Dbxref=NCBI_GP:EGL41818.1;Name=EGL41818.1;Note=identified by match to protein family HMM PF00529%3B match to protein family HMM TIGR01730;gbkey=CDS;locus_tag=HMPREF1039_0149;product=efflux transporter%2C RND family%2C MFP subunit;protein_id=EGL41818.1;transl_table=11
AFIJ01000008.1	Genbank	gene	138788	140014	.	+	.	ID=gene-HMPREF1039_0150;Name=cytX;gbkey=Gene;gene=cytX;gene_biotype=protein_coding;locus_tag=HMPREF1039_0150
AFIJ01000008.1	Genbank	CDS	138788	140014	.	+	0	ID=cds-EGL41846.1;Parent=gene-HMPREF1039_0150;Dbxref=NCBI_GP:EGL41846.1;Name=EGL41846.1;Note=identified by match to protein family HMM PF02133%3B match to protein family HMM TIGR02358;gbkey=CDS;gene=cytX;locus_tag=HMPREF1039_0150;product=putative hydroxymethylpyrimidine transporter CytX;protein_id=EGL41846.1;transl_table=11
AFIJ01000008.1	Genbank	gene	140072	142174	.	-	.	ID=gene-HMPREF1039_0151;Name=HMPREF1039_0151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0151
AFIJ01000008.1	Genbank	CDS	140072	142174	.	-	0	ID=cds-EGL41836.1;Parent=gene-HMPREF1039_0151;Dbxref=NCBI_GP:EGL41836.1;Name=EGL41836.1;Note=identified by match to protein family HMM PF00905%3B match to protein family HMM PF00912%3B match to protein family HMM TIGR02074;gbkey=CDS;locus_tag=HMPREF1039_0151;product=putative penicillin-binding protein 1B;protein_id=EGL41836.1;transl_table=11
AFIJ01000008.1	Genbank	gene	142464	144833	.	+	.	ID=gene-HMPREF1039_0152;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0152
AFIJ01000008.1	Genbank	CDS	142464	144833	.	+	0	ID=cds-EGL41863.1;Parent=gene-HMPREF1039_0152;Dbxref=NCBI_GP:EGL41863.1;Name=EGL41863.1;Note=identified by match to protein family HMM PF00391%3B match to protein family HMM PF01326%3B match to protein family HMM PF02896%3B match to protein family HMM TIGR01418;gbkey=CDS;gene=ppsA;locus_tag=HMPREF1039_0152;product=pyruvate%2C water dikinase;protein_id=EGL41863.1;transl_table=11
AFIJ01000008.1	Genbank	gene	144926	145570	.	+	.	ID=gene-HMPREF1039_0153;Name=ccpN;gbkey=Gene;gene=ccpN;gene_biotype=protein_coding;locus_tag=HMPREF1039_0153
AFIJ01000008.1	Genbank	CDS	144926	145570	.	+	0	ID=cds-EGL41908.1;Parent=gene-HMPREF1039_0153;Dbxref=NCBI_GP:EGL41908.1;Name=EGL41908.1;Note=identified by match to protein family HMM PF00571%3B match to protein family HMM PF08279;gbkey=CDS;gene=ccpN;locus_tag=HMPREF1039_0153;product=HTH domain protein;protein_id=EGL41908.1;transl_table=11
AFIJ01000008.1	Genbank	gene	145572	146393	.	+	.	ID=gene-HMPREF1039_0154;Name=HMPREF1039_0154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0154
AFIJ01000008.1	Genbank	CDS	145572	146393	.	+	0	ID=cds-EGL41853.1;Parent=gene-HMPREF1039_0154;Dbxref=NCBI_GP:EGL41853.1;Name=EGL41853.1;Note=identified by match to protein family HMM PF03618;gbkey=CDS;locus_tag=HMPREF1039_0154;product=hypothetical protein;protein_id=EGL41853.1;transl_table=11
AFIJ01000008.1	Genbank	gene	146720	148627	.	+	.	ID=gene-HMPREF1039_0155;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0155
AFIJ01000008.1	Genbank	CDS	146720	148627	.	+	0	ID=cds-EGL41819.1;Parent=gene-HMPREF1039_0155;Dbxref=NCBI_GP:EGL41819.1;Name=EGL41819.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF02824%3B match to protein family HMM PF03129%3B match to protein family HMM PF07973%3B match to protein family HMM TIGR00418;gbkey=CDS;gene=thrS;locus_tag=HMPREF1039_0155;product=threonine--tRNA ligase;protein_id=EGL41819.1;transl_table=11
##sequence-region AFIJ01000007.1 1 148045
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000007.1	Genbank	region	1	148045	.	+	.	ID=AFIJ01000007.1:1..148045;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000007.1	Genbank	gene	35	754	.	-	.	ID=gene-HMPREF1039_0156;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0156
AFIJ01000007.1	Genbank	CDS	35	754	.	-	0	ID=cds-EGL42060.1;Parent=gene-HMPREF1039_0156;Dbxref=NCBI_GP:EGL42060.1;Name=EGL42060.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00005;gbkey=CDS;gene=glnQ;locus_tag=HMPREF1039_0156;product=ABC transporter%2C ATP-binding protein;protein_id=EGL42060.1;transl_table=11
AFIJ01000007.1	Genbank	gene	741	1409	.	-	.	ID=gene-HMPREF1039_0157;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=HMPREF1039_0157
AFIJ01000007.1	Genbank	CDS	741	1409	.	-	0	ID=cds-EGL42110.1;Parent=gene-HMPREF1039_0157;Dbxref=NCBI_GP:EGL42110.1;Name=EGL42110.1;Note=identified by match to protein family HMM PF00528%3B match to protein family HMM TIGR01726;gbkey=CDS;gene=glnP;locus_tag=HMPREF1039_0157;product=ABC transporter%2C permease protein;protein_id=EGL42110.1;transl_table=11
AFIJ01000007.1	Genbank	gene	1564	2526	.	-	.	ID=gene-HMPREF1039_0158;Name=HMPREF1039_0158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0158
AFIJ01000007.1	Genbank	CDS	1564	2526	.	-	0	ID=cds-EGL42057.1;Parent=gene-HMPREF1039_0158;Dbxref=NCBI_GP:EGL42057.1;Name=EGL42057.1;Note=identified by match to protein family HMM PF00365;gbkey=CDS;locus_tag=HMPREF1039_0158;product=putative 6-phosphofructokinase;protein_id=EGL42057.1;transl_table=11
AFIJ01000007.1	Genbank	gene	2523	3080	.	-	.	ID=gene-HMPREF1039_0159;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HMPREF1039_0159
AFIJ01000007.1	Genbank	CDS	2523	3080	.	-	0	ID=cds-EGL42004.1;Parent=gene-HMPREF1039_0159;Dbxref=NCBI_GP:EGL42004.1;Name=EGL42004.1;Note=identified by match to protein family HMM PF01202;gbkey=CDS;gene=aroK;locus_tag=HMPREF1039_0159;product=shikimate kinase;protein_id=EGL42004.1;transl_table=11
AFIJ01000007.1	Genbank	gene	3291	3440	.	-	.	ID=gene-HMPREF1039_0160;Name=HMPREF1039_0160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0160
AFIJ01000007.1	Genbank	CDS	3291	3440	.	-	0	ID=cds-EGL42072.1;Parent=gene-HMPREF1039_0160;Dbxref=NCBI_GP:EGL42072.1;Name=EGL42072.1;gbkey=CDS;locus_tag=HMPREF1039_0160;product=hypothetical protein;protein_id=EGL42072.1;transl_table=11
AFIJ01000007.1	Genbank	gene	3600	4160	.	+	.	ID=gene-HMPREF1039_0161;Name=HMPREF1039_0161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0161
AFIJ01000007.1	Genbank	CDS	3600	4160	.	+	0	ID=cds-EGL42114.1;Parent=gene-HMPREF1039_0161;Dbxref=NCBI_GP:EGL42114.1;Name=EGL42114.1;Note=identified by match to protein family HMM PF02417;gbkey=CDS;locus_tag=HMPREF1039_0161;product=chromate transport protein;protein_id=EGL42114.1;transl_table=11
AFIJ01000007.1	Genbank	gene	4169	4738	.	+	.	ID=gene-HMPREF1039_0162;Name=HMPREF1039_0162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0162
AFIJ01000007.1	Genbank	CDS	4169	4738	.	+	0	ID=cds-EGL42022.1;Parent=gene-HMPREF1039_0162;Dbxref=NCBI_GP:EGL42022.1;Name=EGL42022.1;Note=identified by match to protein family HMM PF02417;gbkey=CDS;locus_tag=HMPREF1039_0162;product=chromate transport protein;protein_id=EGL42022.1;transl_table=11
AFIJ01000007.1	Genbank	gene	4840	5106	.	+	.	ID=gene-HMPREF1039_0163;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=HMPREF1039_0163
AFIJ01000007.1	Genbank	CDS	4840	5106	.	+	0	ID=cds-EGL42062.1;Parent=gene-HMPREF1039_0163;Dbxref=NCBI_GP:EGL42062.1;Name=EGL42062.1;Note=identified by match to protein family HMM PF01649%3B match to protein family HMM TIGR00029;gbkey=CDS;gene=rpsT;locus_tag=HMPREF1039_0163;product=ribosomal protein S20;protein_id=EGL42062.1;transl_table=11
AFIJ01000007.1	Genbank	gene	5177	6520	.	+	.	ID=gene-HMPREF1039_0164;Name=HMPREF1039_0164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0164
AFIJ01000007.1	Genbank	CDS	5177	6520	.	+	0	ID=cds-EGL42037.1;Parent=gene-HMPREF1039_0164;Dbxref=NCBI_GP:EGL42037.1;Name=EGL42037.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM TIGR00797;gbkey=CDS;locus_tag=HMPREF1039_0164;product=putative multidrug efflux protein;protein_id=EGL42037.1;transl_table=11
AFIJ01000007.1	Genbank	gene	6543	7787	.	+	.	ID=gene-HMPREF1039_0165;Name=HMPREF1039_0165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0165
AFIJ01000007.1	Genbank	CDS	6543	7787	.	+	0	ID=cds-EGL42097.1;Parent=gene-HMPREF1039_0165;Dbxref=NCBI_GP:EGL42097.1;Name=EGL42097.1;Note=identified by match to protein family HMM PF02073;gbkey=CDS;locus_tag=HMPREF1039_0165;product=thermophilic metalloprotease (M29);protein_id=EGL42097.1;transl_table=11
AFIJ01000007.1	Genbank	gene	7861	8559	.	-	.	ID=gene-HMPREF1039_0166;Name=HMPREF1039_0166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0166
AFIJ01000007.1	Genbank	CDS	7861	8559	.	-	0	ID=cds-EGL42015.1;Parent=gene-HMPREF1039_0166;Dbxref=NCBI_GP:EGL42015.1;Name=EGL42015.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0166;product=hypothetical protein;protein_id=EGL42015.1;transl_table=11
AFIJ01000007.1	Genbank	gene	8592	9041	.	-	.	ID=gene-HMPREF1039_0167;Name=HMPREF1039_0167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0167
AFIJ01000007.1	Genbank	CDS	8592	9041	.	-	0	ID=cds-EGL42056.1;Parent=gene-HMPREF1039_0167;Dbxref=NCBI_GP:EGL42056.1;Name=EGL42056.1;Note=identified by match to protein family HMM PF09719%3B match to protein family HMM TIGR01909;gbkey=CDS;locus_tag=HMPREF1039_0167;product=oxidoreductase;protein_id=EGL42056.1;transl_table=11
AFIJ01000007.1	Genbank	gene	9054	9758	.	-	.	ID=gene-HMPREF1039_0168;Name=HMPREF1039_0168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0168
AFIJ01000007.1	Genbank	CDS	9054	9758	.	-	0	ID=cds-EGL42075.1;Parent=gene-HMPREF1039_0168;Dbxref=NCBI_GP:EGL42075.1;Name=EGL42075.1;Note=identified by match to protein family HMM PF09335;gbkey=CDS;locus_tag=HMPREF1039_0168;product=SNARE-like domain protein;protein_id=EGL42075.1;transl_table=11
AFIJ01000007.1	Genbank	gene	9766	10659	.	-	.	ID=gene-HMPREF1039_0169;Name=HMPREF1039_0169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0169
AFIJ01000007.1	Genbank	CDS	9766	10659	.	-	0	ID=cds-EGL42029.1;Parent=gene-HMPREF1039_0169;Dbxref=NCBI_GP:EGL42029.1;Name=EGL42029.1;Note=identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF1039_0169;product=putative membrane protein;protein_id=EGL42029.1;transl_table=11
AFIJ01000007.1	Genbank	gene	10643	12151	.	-	.	ID=gene-HMPREF1039_0170;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0170
AFIJ01000007.1	Genbank	CDS	10643	12151	.	-	0	ID=cds-EGL42021.1;Parent=gene-HMPREF1039_0170;Dbxref=NCBI_GP:EGL42021.1;Name=EGL42021.1;Note=identified by match to protein family HMM PF00291%3B match to protein family HMM TIGR00260;gbkey=CDS;gene=thrC;locus_tag=HMPREF1039_0170;product=threonine synthase;protein_id=EGL42021.1;transl_table=11
AFIJ01000007.1	Genbank	gene	12275	13495	.	-	.	ID=gene-HMPREF1039_0171;Name=HMPREF1039_0171;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0171
AFIJ01000007.1	Genbank	CDS	12275	13495	.	-	0	ID=cds-EGL42121.1;Parent=gene-HMPREF1039_0171;Dbxref=NCBI_GP:EGL42121.1;Name=EGL42121.1;gbkey=CDS;locus_tag=HMPREF1039_0171;product=hypothetical protein;protein_id=EGL42121.1;transl_table=11
AFIJ01000007.1	Genbank	gene	13505	14878	.	-	.	ID=gene-HMPREF1039_0172;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=HMPREF1039_0172
AFIJ01000007.1	Genbank	CDS	13505	14878	.	-	0	ID=cds-EGL42095.1;Parent=gene-HMPREF1039_0172;Dbxref=NCBI_GP:EGL42095.1;Name=EGL42095.1;Note=identified by match to protein family HMM PF07724%3B match to protein family HMM TIGR00390;gbkey=CDS;gene=hslU;locus_tag=HMPREF1039_0172;product=ATP-dependent protease HslVU%2C ATPase subunit;protein_id=EGL42095.1;transl_table=11
AFIJ01000007.1	Genbank	gene	14878	15441	.	-	.	ID=gene-HMPREF1039_0173;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=HMPREF1039_0173
AFIJ01000007.1	Genbank	CDS	14878	15441	.	-	0	ID=cds-EGL42107.1;Parent=gene-HMPREF1039_0173;Dbxref=NCBI_GP:EGL42107.1;Name=EGL42107.1;Note=identified by match to protein family HMM PF00227%3B match to protein family HMM TIGR03692;gbkey=CDS;gene=hslV;locus_tag=HMPREF1039_0173;product=ATP-dependent protease HslVU%2C peptidase subunit;protein_id=EGL42107.1;transl_table=11
AFIJ01000007.1	Genbank	gene	15442	16755	.	-	.	ID=gene-HMPREF1039_0174;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=HMPREF1039_0174
AFIJ01000007.1	Genbank	CDS	15442	16755	.	-	0	ID=cds-EGL42080.1;Parent=gene-HMPREF1039_0174;Dbxref=NCBI_GP:EGL42080.1;Name=EGL42080.1;Note=identified by match to protein family HMM PF01134%3B match to protein family HMM TIGR00137;gbkey=CDS;gene=trmFO;locus_tag=HMPREF1039_0174;product=tRNA:m(5)U-54 methyltransferase;protein_id=EGL42080.1;transl_table=11
AFIJ01000007.1	Genbank	gene	16745	19006	.	-	.	ID=gene-HMPREF1039_0175;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0175
AFIJ01000007.1	Genbank	CDS	16745	19006	.	-	0	ID=cds-EGL41999.1;Parent=gene-HMPREF1039_0175;Dbxref=NCBI_GP:EGL41999.1;Name=EGL41999.1;Note=identified by match to protein family HMM PF01131%3B match to protein family HMM PF01396%3B match to protein family HMM PF01751%3B match to protein family HMM TIGR01051;gbkey=CDS;gene=topA;locus_tag=HMPREF1039_0175;product=DNA topoisomerase I;protein_id=EGL41999.1;transl_table=11
AFIJ01000007.1	Genbank	gene	19235	20017	.	+	.	ID=gene-HMPREF1039_0176;Name=HMPREF1039_0176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0176
AFIJ01000007.1	Genbank	CDS	19235	20017	.	+	0	ID=cds-EGL42087.1;Parent=gene-HMPREF1039_0176;Dbxref=NCBI_GP:EGL42087.1;Name=EGL42087.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00070%3B match to protein family HMM PF07992;gbkey=CDS;locus_tag=HMPREF1039_0176;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=EGL42087.1;transl_table=11
AFIJ01000007.1	Genbank	gene	20020	20745	.	+	.	ID=gene-HMPREF1039_0177;Name=HMPREF1039_0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0177
AFIJ01000007.1	Genbank	CDS	20020	20745	.	+	0	ID=cds-EGL42008.1;Parent=gene-HMPREF1039_0177;Dbxref=NCBI_GP:EGL42008.1;Name=EGL42008.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02852;gbkey=CDS;locus_tag=HMPREF1039_0177;product=pyridine nucleotide-disulfide oxidoreductase%2C dimerization domain protein;protein_id=EGL42008.1;transl_table=11
AFIJ01000007.1	Genbank	gene	20918	21934	.	-	.	ID=gene-HMPREF1039_0178;Name=etfA;gbkey=Gene;gene=etfA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0178
AFIJ01000007.1	Genbank	CDS	20918	21934	.	-	0	ID=cds-EGL42068.1;Parent=gene-HMPREF1039_0178;Dbxref=NCBI_GP:EGL42068.1;Name=EGL42068.1;Note=identified by match to protein family HMM PF00766%3B match to protein family HMM PF01012;gbkey=CDS;gene=etfA;locus_tag=HMPREF1039_0178;product=electron transfer flavoprotein subunit alpha;protein_id=EGL42068.1;transl_table=11
AFIJ01000007.1	Genbank	gene	21955	22761	.	-	.	ID=gene-HMPREF1039_0179;Name=etfB;gbkey=Gene;gene=etfB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0179
AFIJ01000007.1	Genbank	CDS	21955	22761	.	-	0	ID=cds-EGL42047.1;Parent=gene-HMPREF1039_0179;Dbxref=NCBI_GP:EGL42047.1;Name=EGL42047.1;Note=identified by match to protein family HMM PF01012;gbkey=CDS;gene=etfB;locus_tag=HMPREF1039_0179;product=electron transfer flavoprotein subunit beta;protein_id=EGL42047.1;transl_table=11
AFIJ01000007.1	Genbank	gene	22839	23978	.	-	.	ID=gene-HMPREF1039_0180;Name=HMPREF1039_0180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0180
AFIJ01000007.1	Genbank	CDS	22839	23978	.	-	0	ID=cds-EGL42078.1;Parent=gene-HMPREF1039_0180;Dbxref=NCBI_GP:EGL42078.1;Name=EGL42078.1;Note=identified by match to protein family HMM PF00441%3B match to protein family HMM PF02770%3B match to protein family HMM PF02771%3B match to protein family HMM PF08028;gbkey=CDS;locus_tag=HMPREF1039_0180;product=butyryl-CoA dehydrogenase;protein_id=EGL42078.1;transl_table=11
AFIJ01000007.1	Genbank	gene	24438	25052	.	-	.	ID=gene-HMPREF1039_0181;Name=HMPREF1039_0181;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0181
AFIJ01000007.1	Genbank	CDS	24438	25052	.	-	0	ID=cds-EGL42051.1;Parent=gene-HMPREF1039_0181;Dbxref=NCBI_GP:EGL42051.1;Name=EGL42051.1;Note=identified by match to protein family HMM PF00293;gbkey=CDS;locus_tag=HMPREF1039_0181;product=hydrolase%2C NUDIX family;protein_id=EGL42051.1;transl_table=11
AFIJ01000007.1	Genbank	gene	25101	27581	.	-	.	ID=gene-HMPREF1039_0182;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0182
AFIJ01000007.1	Genbank	CDS	25101	27581	.	-	0	ID=cds-EGL42034.1;Parent=gene-HMPREF1039_0182;Dbxref=NCBI_GP:EGL42034.1;Name=EGL42034.1;Note=identified by match to protein family HMM PF00133%3B match to protein family HMM PF08264%3B match to protein family HMM PF09334%3B match to protein family HMM TIGR00396;gbkey=CDS;gene=leuS;locus_tag=HMPREF1039_0182;product=leucine--tRNA ligase;protein_id=EGL42034.1;transl_table=11
AFIJ01000007.1	Genbank	gene	27903	28700	.	+	.	ID=gene-HMPREF1039_0183;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=HMPREF1039_0183
AFIJ01000007.1	Genbank	CDS	27903	28700	.	+	0	ID=cds-EGL42011.1;Parent=gene-HMPREF1039_0183;Dbxref=NCBI_GP:EGL42011.1;Name=EGL42011.1;Note=identified by match to protein family HMM PF01790%3B match to protein family HMM TIGR00544;gbkey=CDS;gene=lgt;locus_tag=HMPREF1039_0183;product=prolipoprotein diacylglyceryl transferase;protein_id=EGL42011.1;transl_table=11
AFIJ01000007.1	Genbank	gene	28955	29344	.	+	.	ID=gene-HMPREF1039_0184;Name=HMPREF1039_0184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0184
AFIJ01000007.1	Genbank	CDS	28955	29344	.	+	0	ID=cds-EGL42088.1;Parent=gene-HMPREF1039_0184;Dbxref=NCBI_GP:EGL42088.1;Name=EGL42088.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;locus_tag=HMPREF1039_0184;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=EGL42088.1;transl_table=11
AFIJ01000007.1	Genbank	gene	29408	29770	.	-	.	ID=gene-HMPREF1039_0185;Name=HMPREF1039_0185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0185
AFIJ01000007.1	Genbank	CDS	29408	29770	.	-	0	ID=cds-EGL42122.1;Parent=gene-HMPREF1039_0185;Dbxref=NCBI_GP:EGL42122.1;Name=EGL42122.1;Note=identified by match to protein family HMM PF06803;gbkey=CDS;locus_tag=HMPREF1039_0185;product=hypothetical protein;protein_id=EGL42122.1;transl_table=11
AFIJ01000007.1	Genbank	gene	29781	30746	.	-	.	ID=gene-HMPREF1039_0186;Name=HMPREF1039_0186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0186
AFIJ01000007.1	Genbank	CDS	29781	30746	.	-	0	ID=cds-EGL42112.1;Parent=gene-HMPREF1039_0186;Dbxref=NCBI_GP:EGL42112.1;Name=EGL42112.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0186;product=hypothetical protein;protein_id=EGL42112.1;transl_table=11
AFIJ01000007.1	Genbank	gene	30805	31557	.	-	.	ID=gene-HMPREF1039_0187;Name=HMPREF1039_0187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0187
AFIJ01000007.1	Genbank	CDS	30805	31557	.	-	0	ID=cds-EGL42086.1;Parent=gene-HMPREF1039_0187;Dbxref=NCBI_GP:EGL42086.1;Name=EGL42086.1;Note=identified by match to protein family HMM PF00106%3B match to protein family HMM PF08659;gbkey=CDS;locus_tag=HMPREF1039_0187;product=oxidoreductase%2C short chain dehydrogenase/reductase family protein;protein_id=EGL42086.1;transl_table=11
AFIJ01000007.1	Genbank	gene	31569	32348	.	-	.	ID=gene-HMPREF1039_0188;Name=HMPREF1039_0188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0188
AFIJ01000007.1	Genbank	CDS	31569	32348	.	-	0	ID=cds-EGL42017.1;Parent=gene-HMPREF1039_0188;Dbxref=NCBI_GP:EGL42017.1;Name=EGL42017.1;Note=identified by match to protein family HMM PF01925;gbkey=CDS;locus_tag=HMPREF1039_0188;product=hypothetical protein;protein_id=EGL42017.1;transl_table=11
AFIJ01000007.1	Genbank	gene	32428	33582	.	-	.	ID=gene-HMPREF1039_0189;Name=HMPREF1039_0189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0189
AFIJ01000007.1	Genbank	CDS	32428	33582	.	-	0	ID=cds-EGL42061.1;Parent=gene-HMPREF1039_0189;Dbxref=NCBI_GP:EGL42061.1;Name=EGL42061.1;Note=identified by match to protein family HMM PF04101%3B match to protein family HMM PF06925;gbkey=CDS;locus_tag=HMPREF1039_0189;product=monogalactosyldiacylglycerol synthase%2C C-terminal domain protein;protein_id=EGL42061.1;transl_table=11
AFIJ01000007.1	Genbank	gene	33715	33993	.	-	.	ID=gene-HMPREF1039_0190;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0190
AFIJ01000007.1	Genbank	CDS	33715	33993	.	-	0	ID=cds-EGL42033.1;Parent=gene-HMPREF1039_0190;Dbxref=NCBI_GP:EGL42033.1;Name=EGL42033.1;Note=identified by match to protein family HMM PF00216;gbkey=CDS;gene=hupB;locus_tag=HMPREF1039_0190;product=putative integration host factor%2C beta subunit;protein_id=EGL42033.1;transl_table=11
AFIJ01000007.1	Genbank	gene	34047	35066	.	-	.	ID=gene-HMPREF1039_0191;Name=HMPREF1039_0191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0191
AFIJ01000007.1	Genbank	CDS	34047	35066	.	-	0	ID=cds-EGL42128.1;Parent=gene-HMPREF1039_0191;Dbxref=NCBI_GP:EGL42128.1;Name=EGL42128.1;Note=identified by match to protein family HMM PF03819%3B match to protein family HMM TIGR00444;gbkey=CDS;locus_tag=HMPREF1039_0191;product=MazG family protein;protein_id=EGL42128.1;transl_table=11
AFIJ01000007.1	Genbank	gene	35082	36629	.	-	.	ID=gene-HMPREF1039_0192;Name=HMPREF1039_0192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0192
AFIJ01000007.1	Genbank	CDS	35082	36629	.	-	0	ID=cds-EGL42089.1;Parent=gene-HMPREF1039_0192;Dbxref=NCBI_GP:EGL42089.1;Name=EGL42089.1;Note=identified by match to protein family HMM PF01554%3B match to protein family HMM PF01943%3B match to protein family HMM PF03023;gbkey=CDS;locus_tag=HMPREF1039_0192;product=putative stage V sporulation protein B;protein_id=EGL42089.1;transl_table=11
AFIJ01000007.1	Genbank	gene	36622	39909	.	-	.	ID=gene-HMPREF1039_0193;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=HMPREF1039_0193
AFIJ01000007.1	Genbank	CDS	36622	39909	.	-	0	ID=cds-EGL42125.1;Parent=gene-HMPREF1039_0193;Dbxref=NCBI_GP:EGL42125.1;Name=EGL42125.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF02559%3B match to protein family HMM PF03461%3B match to protein family HMM TIGR00580;gbkey=CDS;gene=mfd;locus_tag=HMPREF1039_0193;product=transcription-repair coupling factor;protein_id=EGL42125.1;transl_table=11
AFIJ01000007.1	Genbank	gene	40041	41108	.	-	.	ID=gene-HMPREF1039_0194;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0194
AFIJ01000007.1	Genbank	CDS	40041	41108	.	-	0	ID=cds-EGL42073.1;Parent=gene-HMPREF1039_0194;Dbxref=NCBI_GP:EGL42073.1;Name=EGL42073.1;Note=identified by match to protein family HMM PF04551%3B match to protein family HMM TIGR00612;gbkey=CDS;gene=ispG;locus_tag=HMPREF1039_0194;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=EGL42073.1;transl_table=11
AFIJ01000007.1	Genbank	gene	41122	42162	.	-	.	ID=gene-HMPREF1039_0195;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=HMPREF1039_0195
AFIJ01000007.1	Genbank	CDS	41122	42162	.	-	0	ID=cds-EGL42111.1;Parent=gene-HMPREF1039_0195;Dbxref=NCBI_GP:EGL42111.1;Name=EGL42111.1;Note=identified by match to protein family HMM PF02163%3B match to protein family HMM TIGR00054;gbkey=CDS;gene=rseP;locus_tag=HMPREF1039_0195;product=RIP metalloprotease RseP;protein_id=EGL42111.1;transl_table=11
AFIJ01000007.1	Genbank	gene	42186	43331	.	-	.	ID=gene-HMPREF1039_0196;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=HMPREF1039_0196
AFIJ01000007.1	Genbank	CDS	42186	43331	.	-	0	ID=cds-EGL42030.1;Parent=gene-HMPREF1039_0196;Dbxref=NCBI_GP:EGL42030.1;Name=EGL42030.1;Note=identified by match to protein family HMM PF02670%3B match to protein family HMM PF08436%3B match to protein family HMM TIGR00243;gbkey=CDS;gene=dxr;locus_tag=HMPREF1039_0196;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=EGL42030.1;transl_table=11
AFIJ01000007.1	Genbank	gene	43344	44174	.	-	.	ID=gene-HMPREF1039_0197;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0197
AFIJ01000007.1	Genbank	CDS	43344	44174	.	-	0	ID=cds-EGL42016.1;Parent=gene-HMPREF1039_0197;Dbxref=NCBI_GP:EGL42016.1;Name=EGL42016.1;Note=identified by match to protein family HMM PF01148;gbkey=CDS;gene=cdsA;locus_tag=HMPREF1039_0197;product=phosphatidate cytidylyltransferase;protein_id=EGL42016.1;transl_table=11
AFIJ01000007.1	Genbank	gene	44191	44967	.	-	.	ID=gene-HMPREF1039_0198;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0198
AFIJ01000007.1	Genbank	CDS	44191	44967	.	-	0	ID=cds-EGL42043.1;Parent=gene-HMPREF1039_0198;Dbxref=NCBI_GP:EGL42043.1;Name=EGL42043.1;Note=identified by match to protein family HMM PF01255%3B match to protein family HMM TIGR00055;gbkey=CDS;gene=uppS;locus_tag=HMPREF1039_0198;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=EGL42043.1;transl_table=11
AFIJ01000007.1	Genbank	gene	44972	45205	.	-	.	ID=gene-HMPREF1039_0199;Name=HMPREF1039_0199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0199
AFIJ01000007.1	Genbank	CDS	44972	45205	.	-	0	ID=cds-EGL42035.1;Parent=gene-HMPREF1039_0199;Dbxref=NCBI_GP:EGL42035.1;Name=EGL42035.1;gbkey=CDS;locus_tag=HMPREF1039_0199;product=hypothetical protein;protein_id=EGL42035.1;transl_table=11
AFIJ01000007.1	Genbank	gene	45205	45765	.	-	.	ID=gene-HMPREF1039_0200;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=HMPREF1039_0200
AFIJ01000007.1	Genbank	CDS	45205	45765	.	-	0	ID=cds-EGL42108.1;Parent=gene-HMPREF1039_0200;Dbxref=NCBI_GP:EGL42108.1;Name=EGL42108.1;Note=identified by match to protein family HMM PF01765%3B match to protein family HMM TIGR00496;gbkey=CDS;gene=frr;locus_tag=HMPREF1039_0200;product=ribosome recycling factor;protein_id=EGL42108.1;transl_table=11
AFIJ01000007.1	Genbank	gene	45811	46536	.	-	.	ID=gene-HMPREF1039_0201;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=HMPREF1039_0201
AFIJ01000007.1	Genbank	CDS	45811	46536	.	-	0	ID=cds-EGL42050.1;Parent=gene-HMPREF1039_0201;Dbxref=NCBI_GP:EGL42050.1;Name=EGL42050.1;Note=identified by match to protein family HMM PF00696%3B match to protein family HMM TIGR02075;gbkey=CDS;gene=pyrH;locus_tag=HMPREF1039_0201;product=UMP kinase;protein_id=EGL42050.1;transl_table=11
AFIJ01000007.1	Genbank	gene	46615	47262	.	-	.	ID=gene-HMPREF1039_0202;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=HMPREF1039_0202
AFIJ01000007.1	Genbank	CDS	46615	47262	.	-	0	ID=cds-EGL42036.1;Parent=gene-HMPREF1039_0202;Dbxref=NCBI_GP:EGL42036.1;Name=EGL42036.1;Note=identified by match to protein family HMM PF00627%3B match to protein family HMM PF00889%3B match to protein family HMM TIGR00116;gbkey=CDS;gene=tsf;locus_tag=HMPREF1039_0202;product=translation elongation factor Ts;protein_id=EGL42036.1;transl_table=11
AFIJ01000007.1	Genbank	gene	47347	48081	.	-	.	ID=gene-HMPREF1039_0203;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0203
AFIJ01000007.1	Genbank	CDS	47347	48081	.	-	0	ID=cds-EGL42101.1;Parent=gene-HMPREF1039_0203;Dbxref=NCBI_GP:EGL42101.1;Name=EGL42101.1;Note=identified by match to protein family HMM PF00318%3B match to protein family HMM TIGR01011;gbkey=CDS;gene=rpsB;locus_tag=HMPREF1039_0203;product=ribosomal protein S2;protein_id=EGL42101.1;transl_table=11
AFIJ01000007.1	Genbank	gene	48287	50116	.	-	.	ID=gene-HMPREF1039_0204;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0204
AFIJ01000007.1	Genbank	CDS	48287	50116	.	-	0	ID=cds-EGL42032.1;Parent=gene-HMPREF1039_0204;Dbxref=NCBI_GP:EGL42032.1;Name=EGL42032.1;Note=identified by match to protein family HMM PF00310%3B match to protein family HMM PF01380%3B match to protein family HMM TIGR01135;gbkey=CDS;gene=glmS;locus_tag=HMPREF1039_0204;product=glutamine-fructose-6-phosphate transaminase (isomerizing);protein_id=EGL42032.1;transl_table=11
AFIJ01000007.1	Genbank	gene	50163	50306	.	-	.	ID=gene-HMPREF1039_0205;Name=HMPREF1039_0205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0205
AFIJ01000007.1	Genbank	CDS	50163	50306	.	-	0	ID=cds-EGL42020.1;Parent=gene-HMPREF1039_0205;Dbxref=NCBI_GP:EGL42020.1;Name=EGL42020.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0205;product=hypothetical protein;protein_id=EGL42020.1;transl_table=11
AFIJ01000007.1	Genbank	gene	50401	51756	.	-	.	ID=gene-HMPREF1039_0206;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF1039_0206
AFIJ01000007.1	Genbank	CDS	50401	51756	.	-	0	ID=cds-EGL42005.1;Parent=gene-HMPREF1039_0206;Dbxref=NCBI_GP:EGL42005.1;Name=EGL42005.1;Note=identified by match to protein family HMM PF00408%3B match to protein family HMM PF02878%3B match to protein family HMM PF02879%3B match to protein family HMM PF02880%3B match to protein family HMM TIGR01455;gbkey=CDS;gene=glmM;locus_tag=HMPREF1039_0206;product=phosphoglucosamine mutase;protein_id=EGL42005.1;transl_table=11
AFIJ01000007.1	Genbank	gene	51749	53356	.	-	.	ID=gene-HMPREF1039_0207;Name=HMPREF1039_0207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0207
AFIJ01000007.1	Genbank	CDS	51749	53356	.	-	0	ID=cds-EGL42066.1;Parent=gene-HMPREF1039_0207;Dbxref=NCBI_GP:EGL42066.1;Name=EGL42066.1;Note=identified by match to protein family HMM PF01266;gbkey=CDS;locus_tag=HMPREF1039_0207;product=FAD dependent oxidoreductase;protein_id=EGL42066.1;transl_table=11
AFIJ01000007.1	Genbank	gene	53370	54284	.	-	.	ID=gene-HMPREF1039_0208;Name=HMPREF1039_0208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0208
AFIJ01000007.1	Genbank	CDS	53370	54284	.	-	0	ID=cds-EGL42014.1;Parent=gene-HMPREF1039_0208;Dbxref=NCBI_GP:EGL42014.1;Name=EGL42014.1;Note=identified by match to protein family HMM PF07949;gbkey=CDS;locus_tag=HMPREF1039_0208;product=YbbR-like protein;protein_id=EGL42014.1;transl_table=11
AFIJ01000007.1	Genbank	gene	54284	55108	.	-	.	ID=gene-HMPREF1039_0209;Name=HMPREF1039_0209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0209
AFIJ01000007.1	Genbank	CDS	54284	55108	.	-	0	ID=cds-EGL42085.1;Parent=gene-HMPREF1039_0209;Dbxref=NCBI_GP:EGL42085.1;Name=EGL42085.1;Note=identified by match to protein family HMM PF02457%3B match to protein family HMM TIGR00159;gbkey=CDS;locus_tag=HMPREF1039_0209;product=TIGR00159 family protein;protein_id=EGL42085.1;transl_table=11
AFIJ01000007.1	Genbank	gene	55197	55736	.	-	.	ID=gene-HMPREF1039_0210;Name=HMPREF1039_0210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0210
AFIJ01000007.1	Genbank	CDS	55197	55736	.	-	0	ID=cds-EGL42102.1;Parent=gene-HMPREF1039_0210;Dbxref=NCBI_GP:EGL42102.1;Name=EGL42102.1;gbkey=CDS;locus_tag=HMPREF1039_0210;product=hypothetical protein;protein_id=EGL42102.1;transl_table=11
AFIJ01000007.1	Genbank	gene	55819	56151	.	-	.	ID=gene-HMPREF1039_0211;Name=HMPREF1039_0211;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0211
AFIJ01000007.1	Genbank	CDS	55819	56151	.	-	0	ID=cds-EGL42042.1;Parent=gene-HMPREF1039_0211;Dbxref=NCBI_GP:EGL42042.1;Name=EGL42042.1;Note=identified by match to protein family HMM PF01371%3B match to protein family HMM TIGR02531;gbkey=CDS;locus_tag=HMPREF1039_0211;product=TrpR family protein YerC/YecD;protein_id=EGL42042.1;transl_table=11
AFIJ01000007.1	Genbank	gene	56234	59833	.	-	.	ID=gene-HMPREF1039_0212;Name=polC;gbkey=Gene;gene=polC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0212
AFIJ01000007.1	Genbank	CDS	56234	59833	.	-	0	ID=cds-EGL42103.1;Parent=gene-HMPREF1039_0212;Dbxref=NCBI_GP:EGL42103.1;Name=EGL42103.1;Note=identified by match to protein family HMM PF01336%3B match to protein family HMM PF02811%3B match to protein family HMM PF07733%3B match to protein family HMM TIGR01405;gbkey=CDS;gene=polC;locus_tag=HMPREF1039_0212;product=DNA polymerase III%2C alpha subunit%2C Gram-positive type;protein_id=EGL42103.1;transl_table=11
AFIJ01000007.1	Genbank	gene	59865	60878	.	-	.	ID=gene-HMPREF1039_0213;Name=HMPREF1039_0213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0213
AFIJ01000007.1	Genbank	CDS	59865	60878	.	-	0	ID=cds-EGL42117.1;Parent=gene-HMPREF1039_0213;Dbxref=NCBI_GP:EGL42117.1;Name=EGL42117.1;Note=identified by match to protein family HMM PF06144;gbkey=CDS;locus_tag=HMPREF1039_0213;product=DNA polymerase III%2C delta subunit;protein_id=EGL42117.1;transl_table=11
AFIJ01000007.1	Genbank	gene	60875	62995	.	-	.	ID=gene-HMPREF1039_0214;Name=HMPREF1039_0214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0214
AFIJ01000007.1	Genbank	CDS	60875	62995	.	-	0	ID=cds-EGL42041.1;Parent=gene-HMPREF1039_0214;Dbxref=NCBI_GP:EGL42041.1;Name=EGL42041.1;Note=identified by match to protein family HMM PF03772%3B match to protein family HMM TIGR00360;gbkey=CDS;locus_tag=HMPREF1039_0214;product=ComEC/Rec2-like protein;protein_id=EGL42041.1;transl_table=11
AFIJ01000007.1	Genbank	gene	62992	63528	.	-	.	ID=gene-HMPREF1039_0215;Name=HMPREF1039_0215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0215
AFIJ01000007.1	Genbank	CDS	62992	63528	.	-	0	ID=cds-EGL42081.1;Parent=gene-HMPREF1039_0215;Dbxref=NCBI_GP:EGL42081.1;Name=EGL42081.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM TIGR00426;gbkey=CDS;locus_tag=HMPREF1039_0215;product=comEA protein;protein_id=EGL42081.1;transl_table=11
AFIJ01000007.1	Genbank	gene	63675	65129	.	-	.	ID=gene-HMPREF1039_0216;Name=HMPREF1039_0216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0216
AFIJ01000007.1	Genbank	CDS	63675	65129	.	-	0	ID=cds-EGL42045.1;Parent=gene-HMPREF1039_0216;Dbxref=NCBI_GP:EGL42045.1;Name=EGL42045.1;Note=identified by match to protein family HMM PF02386;gbkey=CDS;locus_tag=HMPREF1039_0216;product=cation transport protein;protein_id=EGL42045.1;transl_table=11
AFIJ01000007.1	Genbank	gene	65138	66586	.	-	.	ID=gene-HMPREF1039_0217;Name=HMPREF1039_0217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0217
AFIJ01000007.1	Genbank	CDS	65138	66586	.	-	0	ID=cds-EGL42065.1;Parent=gene-HMPREF1039_0217;Dbxref=NCBI_GP:EGL42065.1;Name=EGL42065.1;Note=identified by match to protein family HMM PF02386;gbkey=CDS;locus_tag=HMPREF1039_0217;product=cation transport protein;protein_id=EGL42065.1;transl_table=11
AFIJ01000007.1	Genbank	gene	66588	67943	.	-	.	ID=gene-HMPREF1039_0218;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0218
AFIJ01000007.1	Genbank	CDS	66588	67943	.	-	0	ID=cds-EGL42001.1;Parent=gene-HMPREF1039_0218;Dbxref=NCBI_GP:EGL42001.1;Name=EGL42001.1;Note=identified by match to protein family HMM PF02080%3B match to protein family HMM PF02254;gbkey=CDS;gene=trkA;locus_tag=HMPREF1039_0218;product=potassium transporter peripheral membrane component;protein_id=EGL42001.1;transl_table=11
AFIJ01000007.1	Genbank	gene	68126	70057	.	-	.	ID=gene-HMPREF1039_0219;Name=cadA;gbkey=Gene;gene=cadA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0219
AFIJ01000007.1	Genbank	CDS	68126	70057	.	-	0	ID=cds-EGL42070.1;Parent=gene-HMPREF1039_0219;Dbxref=NCBI_GP:EGL42070.1;Name=EGL42070.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts%3B identified by match to protein family HMM PF00122%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01512%3B match to protein family HMM TIGR01525;gbkey=CDS;gene=cadA;locus_tag=HMPREF1039_0219;product=cadmium-exporting ATPase;protein_id=EGL42070.1;transl_table=11
AFIJ01000007.1	Genbank	gene	70116	70367	.	-	.	ID=gene-HMPREF1039_0220;Name=HMPREF1039_0220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0220
AFIJ01000007.1	Genbank	CDS	70116	70367	.	-	0	ID=cds-EGL41998.1;Parent=gene-HMPREF1039_0220;Dbxref=NCBI_GP:EGL41998.1;Name=EGL41998.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts;gbkey=CDS;locus_tag=HMPREF1039_0220;product=hypothetical protein;protein_id=EGL41998.1;transl_table=11
AFIJ01000007.1	Genbank	gene	70502	70699	.	-	.	ID=gene-HMPREF1039_0221;Name=cspB;gbkey=Gene;gene=cspB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0221
AFIJ01000007.1	Genbank	CDS	70502	70699	.	-	0	ID=cds-EGL42074.1;Parent=gene-HMPREF1039_0221;Dbxref=NCBI_GP:EGL42074.1;Name=EGL42074.1;Note=identified by match to protein family HMM PF00313;gbkey=CDS;gene=cspB;locus_tag=HMPREF1039_0221;product=cold-shock DNA-binding domain protein;protein_id=EGL42074.1;transl_table=11
AFIJ01000007.1	Genbank	gene	70834	71331	.	-	.	ID=gene-HMPREF1039_0222;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0222
AFIJ01000007.1	Genbank	CDS	70834	71331	.	-	0	ID=cds-EGL42064.1;Parent=gene-HMPREF1039_0222;Dbxref=NCBI_GP:EGL42064.1;Name=EGL42064.1;Note=identified by match to protein family HMM PF00186;gbkey=CDS;gene=folA;locus_tag=HMPREF1039_0222;product=dihydrofolate reductase;protein_id=EGL42064.1;transl_table=11
AFIJ01000007.1	Genbank	gene	71331	72122	.	-	.	ID=gene-HMPREF1039_0223;Name=thyA;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0223
AFIJ01000007.1	Genbank	CDS	71331	72122	.	-	0	ID=cds-EGL42013.1;Parent=gene-HMPREF1039_0223;Dbxref=NCBI_GP:EGL42013.1;Name=EGL42013.1;Note=identified by match to protein family HMM PF00303%3B match to protein family HMM TIGR03284;gbkey=CDS;gene=thyA;locus_tag=HMPREF1039_0223;product=thymidylate synthase;protein_id=EGL42013.1;transl_table=11
AFIJ01000007.1	Genbank	gene	72115	73929	.	-	.	ID=gene-HMPREF1039_0224;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0224
AFIJ01000007.1	Genbank	CDS	72115	73929	.	-	0	ID=cds-EGL42120.1;Parent=gene-HMPREF1039_0224;Dbxref=NCBI_GP:EGL42120.1;Name=EGL42120.1;Note=identified by match to protein family HMM PF00270%3B match to protein family HMM PF00271%3B match to protein family HMM PF00570%3B match to protein family HMM PF09382%3B match to protein family HMM TIGR00614%3B match to protein family HMM TIGR01389;gbkey=CDS;gene=recQ;locus_tag=HMPREF1039_0224;product=ATP-dependent DNA helicase RecQ;protein_id=EGL42120.1;transl_table=11
AFIJ01000007.1	Genbank	gene	74003	75190	.	-	.	ID=gene-HMPREF1039_0225;Name=HMPREF1039_0225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0225
AFIJ01000007.1	Genbank	CDS	74003	75190	.	-	0	ID=cds-EGL42115.1;Parent=gene-HMPREF1039_0225;Dbxref=NCBI_GP:EGL42115.1;Name=EGL42115.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF1039_0225;product=aminotransferase%2C class I/II;protein_id=EGL42115.1;transl_table=11
AFIJ01000007.1	Genbank	gene	75311	75454	.	-	.	ID=gene-HMPREF1039_0226;Name=HMPREF1039_0226;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0226
AFIJ01000007.1	Genbank	CDS	75311	75454	.	-	0	ID=cds-EGL42039.1;Parent=gene-HMPREF1039_0226;Dbxref=NCBI_GP:EGL42039.1;Name=EGL42039.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0226;product=hypothetical protein;protein_id=EGL42039.1;transl_table=11
AFIJ01000007.1	Genbank	gene	75562	75996	.	-	.	ID=gene-HMPREF1039_0227;Name=HMPREF1039_0227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0227
AFIJ01000007.1	Genbank	CDS	75562	75996	.	-	0	ID=cds-EGL42113.1;Parent=gene-HMPREF1039_0227;Dbxref=NCBI_GP:EGL42113.1;Name=EGL42113.1;Note=identified by match to protein family HMM PF02082%3B match to protein family HMM TIGR00738;gbkey=CDS;locus_tag=HMPREF1039_0227;product=putative iron-responsive transcriptional regulator;protein_id=EGL42113.1;transl_table=11
AFIJ01000007.1	Genbank	gene	76237	77832	.	+	.	ID=gene-HMPREF1039_0228;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0228
AFIJ01000007.1	Genbank	CDS	76237	77832	.	+	0	ID=cds-EGL42024.1;Parent=gene-HMPREF1039_0228;Dbxref=NCBI_GP:EGL42024.1;Name=EGL42024.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00503;gbkey=CDS;gene=prfC;locus_tag=HMPREF1039_0228;product=peptide chain release factor 3;protein_id=EGL42024.1;transl_table=11
AFIJ01000007.1	Genbank	gene	77939	78325	.	-	.	ID=gene-HMPREF1039_0229;Name=HMPREF1039_0229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0229
AFIJ01000007.1	Genbank	CDS	77939	78325	.	-	0	ID=cds-EGL42010.1;Parent=gene-HMPREF1039_0229;Dbxref=NCBI_GP:EGL42010.1;Name=EGL42010.1;Note=identified by match to protein family HMM PF01042%3B match to protein family HMM TIGR00004;gbkey=CDS;locus_tag=HMPREF1039_0229;product=putative endoribonuclease L-PSP;protein_id=EGL42010.1;transl_table=11
AFIJ01000007.1	Genbank	gene	78407	78802	.	-	.	ID=gene-HMPREF1039_0230;Name=HMPREF1039_0230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0230
AFIJ01000007.1	Genbank	CDS	78407	78802	.	-	0	ID=cds-EGL42118.1;Parent=gene-HMPREF1039_0230;Dbxref=NCBI_GP:EGL42118.1;Name=EGL42118.1;gbkey=CDS;locus_tag=HMPREF1039_0230;product=hypothetical protein;protein_id=EGL42118.1;transl_table=11
AFIJ01000007.1	Genbank	gene	78926	79570	.	-	.	ID=gene-HMPREF1039_0231;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=HMPREF1039_0231
AFIJ01000007.1	Genbank	CDS	78926	79570	.	-	0	ID=cds-EGL42054.1;Parent=gene-HMPREF1039_0231;Dbxref=NCBI_GP:EGL42054.1;Name=EGL42054.1;Note=identified by match to protein family HMM PF00633%3B match to protein family HMM PF00730%3B match to protein family HMM TIGR01083;gbkey=CDS;gene=nth;locus_tag=HMPREF1039_0231;product=endonuclease III;protein_id=EGL42054.1;transl_table=11
AFIJ01000007.1	Genbank	gene	79639	80010	.	-	.	ID=gene-HMPREF1039_0232;Name=HMPREF1039_0232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0232
AFIJ01000007.1	Genbank	CDS	79639	80010	.	-	0	ID=cds-EGL42104.1;Parent=gene-HMPREF1039_0232;Dbxref=NCBI_GP:EGL42104.1;Name=EGL42104.1;gbkey=CDS;locus_tag=HMPREF1039_0232;product=hypothetical protein;protein_id=EGL42104.1;transl_table=11
AFIJ01000007.1	Genbank	gene	80074	80604	.	-	.	ID=gene-HMPREF1039_0233;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0233
AFIJ01000007.1	Genbank	CDS	80074	80604	.	-	0	ID=cds-EGL41997.1;Parent=gene-HMPREF1039_0233;Dbxref=NCBI_GP:EGL41997.1;Name=EGL41997.1;Note=identified by match to protein family HMM PF01227%3B match to protein family HMM TIGR03139;gbkey=CDS;gene=queF;locus_tag=HMPREF1039_0233;product=preQ(1) synthase;protein_id=EGL41997.1;transl_table=11
AFIJ01000007.1	Genbank	gene	80740	81300	.	-	.	ID=gene-HMPREF1039_0234;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0234
AFIJ01000007.1	Genbank	CDS	80740	81300	.	-	0	ID=cds-EGL42116.1;Parent=gene-HMPREF1039_0234;Dbxref=NCBI_GP:EGL42116.1;Name=EGL42116.1;Note=identified by match to protein family HMM PF00717%3B match to protein family HMM TIGR02227;gbkey=CDS;gene=lepB;locus_tag=HMPREF1039_0234;product=signal peptidase I;protein_id=EGL42116.1;transl_table=11
AFIJ01000007.1	Genbank	gene	81405	83198	.	-	.	ID=gene-HMPREF1039_0235;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0235
AFIJ01000007.1	Genbank	CDS	81405	83198	.	-	0	ID=cds-EGL42091.1;Parent=gene-HMPREF1039_0235;Dbxref=NCBI_GP:EGL42091.1;Name=EGL42091.1;Note=identified by match to protein family HMM PF00152%3B match to protein family HMM PF00587%3B match to protein family HMM PF01336%3B match to protein family HMM PF02938%3B match to protein family HMM TIGR00459;gbkey=CDS;gene=aspS;locus_tag=HMPREF1039_0235;product=aspartate--tRNA ligase;protein_id=EGL42091.1;transl_table=11
AFIJ01000007.1	Genbank	gene	83202	84470	.	-	.	ID=gene-HMPREF1039_0236;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0236
AFIJ01000007.1	Genbank	CDS	83202	84470	.	-	0	ID=cds-EGL42083.1;Parent=gene-HMPREF1039_0236;Dbxref=NCBI_GP:EGL42083.1;Name=EGL42083.1;Note=identified by match to protein family HMM PF00587%3B match to protein family HMM PF03129%3B match to protein family HMM TIGR00442;gbkey=CDS;gene=hisS;locus_tag=HMPREF1039_0236;product=histidine--tRNA ligase;protein_id=EGL42083.1;transl_table=11
AFIJ01000007.1	Genbank	gene	84470	85921	.	-	.	ID=gene-HMPREF1039_0237;Name=hemZ;gbkey=Gene;gene=hemZ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0237
AFIJ01000007.1	Genbank	CDS	84470	85921	.	-	0	ID=cds-EGL42094.1;Parent=gene-HMPREF1039_0237;Dbxref=NCBI_GP:EGL42094.1;Name=EGL42094.1;Note=identified by match to protein family HMM PF04055%3B match to protein family HMM TIGR03994;gbkey=CDS;gene=hemZ;locus_tag=HMPREF1039_0237;product=coproporphyrinogen dehydrogenase HemZ;protein_id=EGL42094.1;transl_table=11
AFIJ01000007.1	Genbank	gene	85914	86429	.	-	.	ID=gene-HMPREF1039_0238;Name=HMPREF1039_0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0238
AFIJ01000007.1	Genbank	CDS	85914	86429	.	-	0	ID=cds-EGL42007.1;Parent=gene-HMPREF1039_0238;Dbxref=NCBI_GP:EGL42007.1;Name=EGL42007.1;Note=identified by match to protein family HMM PF01475;gbkey=CDS;locus_tag=HMPREF1039_0238;product=transcriptional regulator%2C Fur family;protein_id=EGL42007.1;transl_table=11
AFIJ01000007.1	Genbank	gene	86416	87495	.	-	.	ID=gene-HMPREF1039_0239;Name=HMPREF1039_0239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0239
AFIJ01000007.1	Genbank	CDS	86416	87495	.	-	0	ID=cds-EGL42100.1;Parent=gene-HMPREF1039_0239;Dbxref=NCBI_GP:EGL42100.1;Name=EGL42100.1;Note=identified by match to protein family HMM PF01594;gbkey=CDS;locus_tag=HMPREF1039_0239;product=hypothetical protein;protein_id=EGL42100.1;transl_table=11
AFIJ01000007.1	Genbank	gene	87499	88140	.	-	.	ID=gene-HMPREF1039_0240;Name=HMPREF1039_0240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0240
AFIJ01000007.1	Genbank	CDS	87499	88140	.	-	0	ID=cds-EGL42055.1;Parent=gene-HMPREF1039_0240;Dbxref=NCBI_GP:EGL42055.1;Name=EGL42055.1;Note=identified by match to protein family HMM PF00753;gbkey=CDS;locus_tag=HMPREF1039_0240;product=metallo-beta-lactamase domain protein;protein_id=EGL42055.1;transl_table=11
AFIJ01000007.1	Genbank	gene	88171	88620	.	-	.	ID=gene-HMPREF1039_0241;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=HMPREF1039_0241
AFIJ01000007.1	Genbank	CDS	88171	88620	.	-	0	ID=cds-EGL42119.1;Parent=gene-HMPREF1039_0241;Dbxref=NCBI_GP:EGL42119.1;Name=EGL42119.1;Note=identified by match to protein family HMM PF02580%3B match to protein family HMM TIGR00256;gbkey=CDS;gene=dtd;locus_tag=HMPREF1039_0241;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=EGL42119.1;transl_table=11
AFIJ01000007.1	Genbank	gene	88617	90818	.	-	.	ID=gene-HMPREF1039_0242;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0242
AFIJ01000007.1	Genbank	CDS	88617	90818	.	-	0	ID=cds-EGL42052.1;Parent=gene-HMPREF1039_0242;Dbxref=NCBI_GP:EGL42052.1;Name=EGL42052.1;Note=identified by match to protein family HMM PF01842%3B match to protein family HMM PF01966%3B match to protein family HMM PF02824%3B match to protein family HMM PF04607%3B match to protein family HMM TIGR00691;gbkey=CDS;gene=relA;locus_tag=HMPREF1039_0242;product=RelA/SpoT family protein;protein_id=EGL42052.1;transl_table=11
AFIJ01000007.1	Genbank	gene	90832	92808	.	-	.	ID=gene-HMPREF1039_0243;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0243
AFIJ01000007.1	Genbank	CDS	90832	92808	.	-	0	ID=cds-EGL42090.1;Parent=gene-HMPREF1039_0243;Dbxref=NCBI_GP:EGL42090.1;Name=EGL42090.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02272%3B match to protein family HMM TIGR00644;gbkey=CDS;gene=recJ;locus_tag=HMPREF1039_0243;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=EGL42090.1;transl_table=11
AFIJ01000007.1	Genbank	gene	92949	93098	.	-	.	ID=gene-HMPREF1039_0244;Name=HMPREF1039_0244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0244
AFIJ01000007.1	Genbank	CDS	92949	93098	.	-	0	ID=cds-EGL42006.1;Parent=gene-HMPREF1039_0244;Dbxref=NCBI_GP:EGL42006.1;Name=EGL42006.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0244;product=hypothetical protein;protein_id=EGL42006.1;transl_table=11
AFIJ01000007.1	Genbank	gene	93174	94286	.	-	.	ID=gene-HMPREF1039_0245;Name=HMPREF1039_0245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0245
AFIJ01000007.1	Genbank	CDS	93174	94286	.	-	0	ID=cds-EGL42048.1;Parent=gene-HMPREF1039_0245;Dbxref=NCBI_GP:EGL42048.1;Name=EGL42048.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF1039_0245;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EGL42048.1;transl_table=11
AFIJ01000007.1	Genbank	gene	94311	96047	.	-	.	ID=gene-HMPREF1039_0246;Name=ade;gbkey=Gene;gene=ade;gene_biotype=protein_coding;locus_tag=HMPREF1039_0246
AFIJ01000007.1	Genbank	CDS	94311	96047	.	-	0	ID=cds-EGL42123.1;Parent=gene-HMPREF1039_0246;Dbxref=NCBI_GP:EGL42123.1;Name=EGL42123.1;Note=identified by match to protein family HMM PF01979%3B match to protein family HMM PF07969%3B match to protein family HMM TIGR01178;gbkey=CDS;gene=ade;locus_tag=HMPREF1039_0246;product=adenine deaminase;protein_id=EGL42123.1;transl_table=11
AFIJ01000007.1	Genbank	gene	96214	97065	.	-	.	ID=gene-HMPREF1039_0247;Name=HMPREF1039_0247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0247
AFIJ01000007.1	Genbank	CDS	96214	97065	.	-	0	ID=cds-EGL42058.1;Parent=gene-HMPREF1039_0247;Dbxref=NCBI_GP:EGL42058.1;Name=EGL42058.1;Note=identified by match to protein family HMM PF01435;gbkey=CDS;locus_tag=HMPREF1039_0247;product=peptidase%2C M48 family;protein_id=EGL42058.1;transl_table=11
AFIJ01000007.1	Genbank	gene	97160	97699	.	-	.	ID=gene-HMPREF1039_0248;Name=HMPREF1039_0248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0248
AFIJ01000007.1	Genbank	CDS	97160	97699	.	-	0	ID=cds-EGL42076.1;Parent=gene-HMPREF1039_0248;Dbxref=NCBI_GP:EGL42076.1;Name=EGL42076.1;gbkey=CDS;locus_tag=HMPREF1039_0248;product=hypothetical protein;protein_id=EGL42076.1;transl_table=11
AFIJ01000007.1	Genbank	gene	97711	98337	.	-	.	ID=gene-HMPREF1039_0249;Name=HMPREF1039_0249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0249
AFIJ01000007.1	Genbank	CDS	97711	98337	.	-	0	ID=cds-EGL42092.1;Parent=gene-HMPREF1039_0249;Dbxref=NCBI_GP:EGL42092.1;Name=EGL42092.1;Note=identified by match to protein family HMM PF02163;gbkey=CDS;locus_tag=HMPREF1039_0249;product=peptidase%2C M50 family;protein_id=EGL42092.1;transl_table=11
AFIJ01000007.1	Genbank	gene	98435	99307	.	-	.	ID=gene-HMPREF1039_0250;Name=HMPREF1039_0250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0250
AFIJ01000007.1	Genbank	CDS	98435	99307	.	-	0	ID=cds-EGL42019.1;Parent=gene-HMPREF1039_0250;Dbxref=NCBI_GP:EGL42019.1;Name=EGL42019.1;Note=identified by match to protein family HMM PF01380%3B match to protein family HMM PF01418;gbkey=CDS;locus_tag=HMPREF1039_0250;product=transcriptional regulator%2C RpiR family;protein_id=EGL42019.1;transl_table=11
AFIJ01000007.1	Genbank	gene	99334	100743	.	-	.	ID=gene-HMPREF1039_0251;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=HMPREF1039_0251
AFIJ01000007.1	Genbank	CDS	99334	100743	.	-	0	ID=cds-EGL42079.1;Parent=gene-HMPREF1039_0251;Dbxref=NCBI_GP:EGL42079.1;Name=EGL42079.1;Note=identified by match to protein family HMM PF00393%3B match to protein family HMM PF03446%3B match to protein family HMM TIGR00873;gbkey=CDS;gene=gnd;locus_tag=HMPREF1039_0251;product=phosphogluconate dehydrogenase (decarboxylating);protein_id=EGL42079.1;transl_table=11
AFIJ01000007.1	Genbank	gene	100766	102313	.	-	.	ID=gene-HMPREF1039_0252;Name=HMPREF1039_0252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0252
AFIJ01000007.1	Genbank	CDS	100766	102313	.	-	0	ID=cds-EGL42082.1;Parent=gene-HMPREF1039_0252;Dbxref=NCBI_GP:EGL42082.1;Name=EGL42082.1;Note=identified by match to protein family HMM PF00370%3B match to protein family HMM PF02782;gbkey=CDS;locus_tag=HMPREF1039_0252;product=putative gluconokinase;protein_id=EGL42082.1;transl_table=11
AFIJ01000007.1	Genbank	gene	102479	103750	.	-	.	ID=gene-HMPREF1039_0253;Name=HMPREF1039_0253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0253
AFIJ01000007.1	Genbank	CDS	102479	103750	.	-	0	ID=cds-EGL42049.1;Parent=gene-HMPREF1039_0253;Dbxref=NCBI_GP:EGL42049.1;Name=EGL42049.1;Note=identified by match to protein family HMM PF00595%3B match to protein family HMM PF03572%3B match to protein family HMM TIGR00225;gbkey=CDS;locus_tag=HMPREF1039_0253;product=peptidase%2C S41 family;protein_id=EGL42049.1;transl_table=11
AFIJ01000007.1	Genbank	gene	103761	105008	.	-	.	ID=gene-HMPREF1039_0254;Name=HMPREF1039_0254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0254
AFIJ01000007.1	Genbank	CDS	103761	105008	.	-	0	ID=cds-EGL42012.1;Parent=gene-HMPREF1039_0254;Dbxref=NCBI_GP:EGL42012.1;Name=EGL42012.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF1039_0254;product=peptidase%2C M23 family;protein_id=EGL42012.1;transl_table=11
AFIJ01000007.1	Genbank	gene	105012	105914	.	-	.	ID=gene-HMPREF1039_0255;Name=HMPREF1039_0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0255
AFIJ01000007.1	Genbank	CDS	105012	105914	.	-	0	ID=cds-EGL42084.1;Parent=gene-HMPREF1039_0255;Dbxref=NCBI_GP:EGL42084.1;Name=EGL42084.1;Note=identified by match to protein family HMM PF02687;gbkey=CDS;locus_tag=HMPREF1039_0255;product=efflux ABC transporter%2C permease protein;protein_id=EGL42084.1;transl_table=11
AFIJ01000007.1	Genbank	gene	105880	106566	.	-	.	ID=gene-HMPREF1039_0256;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0256
AFIJ01000007.1	Genbank	CDS	105880	106566	.	-	0	ID=cds-EGL42126.1;Parent=gene-HMPREF1039_0256;Dbxref=NCBI_GP:EGL42126.1;Name=EGL42126.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR02673;gbkey=CDS;gene=ftsE;locus_tag=HMPREF1039_0256;product=cell division ATP-binding protein FtsE;protein_id=EGL42126.1;transl_table=11
AFIJ01000007.1	Genbank	gene	106595	107728	.	-	.	ID=gene-HMPREF1039_0257;Name=csaB;gbkey=Gene;gene=csaB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0257
AFIJ01000007.1	Genbank	CDS	106595	107728	.	-	0	ID=cds-EGL42025.1;Parent=gene-HMPREF1039_0257;Dbxref=NCBI_GP:EGL42025.1;Name=EGL42025.1;Note=identified by match to protein family HMM PF04230%3B match to protein family HMM TIGR03609;gbkey=CDS;gene=csaB;locus_tag=HMPREF1039_0257;product=polysaccharide pyruvyl transferase CsaB;protein_id=EGL42025.1;transl_table=11
AFIJ01000007.1	Genbank	gene	107827	109776	.	-	.	ID=gene-HMPREF1039_0258;Name=HMPREF1039_0258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0258
AFIJ01000007.1	Genbank	CDS	107827	109776	.	-	0	ID=cds-EGL42040.1;Parent=gene-HMPREF1039_0258;Dbxref=NCBI_GP:EGL42040.1;Name=EGL42040.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0258;product=hypothetical protein;protein_id=EGL42040.1;transl_table=11
AFIJ01000007.1	Genbank	gene	109831	110865	.	-	.	ID=gene-HMPREF1039_0259;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0259
AFIJ01000007.1	Genbank	CDS	109831	110865	.	-	0	ID=cds-EGL42093.1;Parent=gene-HMPREF1039_0259;Dbxref=NCBI_GP:EGL42093.1;Name=EGL42093.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00472%3B match to protein family HMM PF03462%3B match to protein family HMM TIGR00020;gbkey=CDS;gene=prfB;locus_tag=HMPREF1039_0259;product=peptide chain release factor 2;protein_id=EGL42093.1;transl_table=11
AFIJ01000007.1	Genbank	gene	111070	113532	.	-	.	ID=gene-HMPREF1039_0260;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0260
AFIJ01000007.1	Genbank	CDS	111070	113532	.	-	0	ID=cds-EGL42069.1;Parent=gene-HMPREF1039_0260;Dbxref=NCBI_GP:EGL42069.1;Name=EGL42069.1;Note=identified by match to protein family HMM PF01043%3B match to protein family HMM PF07516%3B match to protein family HMM PF07517%3B match to protein family HMM TIGR00963;gbkey=CDS;gene=secA;locus_tag=HMPREF1039_0260;product=preprotein translocase%2C SecA subunit;protein_id=EGL42069.1;transl_table=11
AFIJ01000007.1	Genbank	gene	113742	114065	.	+	.	ID=gene-HMPREF1039_0261;Name=HMPREF1039_0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0261
AFIJ01000007.1	Genbank	CDS	113742	114065	.	+	0	ID=cds-EGL42028.1;Parent=gene-HMPREF1039_0261;Dbxref=NCBI_GP:EGL42028.1;Name=EGL42028.1;Note=identified by match to protein family HMM PF02694;gbkey=CDS;locus_tag=HMPREF1039_0261;product=hypothetical protein;protein_id=EGL42028.1;transl_table=11
AFIJ01000007.1	Genbank	gene	114121	114462	.	-	.	ID=gene-HMPREF1039_0262;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0262
AFIJ01000007.1	Genbank	CDS	114121	114462	.	-	0	ID=cds-EGL42003.1;Parent=gene-HMPREF1039_0262;Dbxref=NCBI_GP:EGL42003.1;Name=EGL42003.1;Note=identified by match to protein family HMM PF01245%3B match to protein family HMM TIGR01024;gbkey=CDS;gene=rplS;locus_tag=HMPREF1039_0262;product=ribosomal protein L19;protein_id=EGL42003.1;transl_table=11
AFIJ01000007.1	Genbank	gene	114643	117825	.	-	.	ID=gene-HMPREF1039_0263;Name=HMPREF1039_0263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0263
AFIJ01000007.1	Genbank	CDS	114643	117825	.	-	0	ID=cds-EGL42077.1;Parent=gene-HMPREF1039_0263;Dbxref=NCBI_GP:EGL42077.1;Name=EGL42077.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_0263;product=Hep/Hag repeat protein;protein_id=EGL42077.1;transl_table=11
AFIJ01000007.1	Genbank	gene	118297	119598	.	-	.	ID=gene-HMPREF1039_0264;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0264
AFIJ01000007.1	Genbank	CDS	118297	119598	.	-	0	ID=cds-EGL42109.1;Parent=gene-HMPREF1039_0264;Dbxref=NCBI_GP:EGL42109.1;Name=EGL42109.1;Note=identified by match to protein family HMM PF01964%3B match to protein family HMM TIGR00190;gbkey=CDS;gene=thiC;locus_tag=HMPREF1039_0264;product=thiamine biosynthesis protein ThiC;protein_id=EGL42109.1;transl_table=11
AFIJ01000007.1	Genbank	binding_site	119655	119752	.	-	.	ID=id-AFIJ01000007.1:119655..119752;Note=TPP riboswitch (THI element)%3B Rfam score 66.34;bound_moiety=thiamine/thiamin pyrophosphate;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00059
AFIJ01000007.1	Genbank	gene	119879	120571	.	+	.	ID=gene-HMPREF1039_0266;Name=HMPREF1039_0266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0266
AFIJ01000007.1	Genbank	CDS	119879	120571	.	+	0	ID=cds-EGL42038.1;Parent=gene-HMPREF1039_0266;Dbxref=NCBI_GP:EGL42038.1;Name=EGL42038.1;Note=identified by match to protein family HMM PF04402;gbkey=CDS;locus_tag=HMPREF1039_0266;product=hypothetical protein;protein_id=EGL42038.1;transl_table=11
AFIJ01000007.1	Genbank	gene	120757	124179	.	-	.	ID=gene-HMPREF1039_0267;Name=HMPREF1039_0267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0267
AFIJ01000007.1	Genbank	CDS	120757	124179	.	-	0	ID=cds-EGL42127.1;Parent=gene-HMPREF1039_0267;Dbxref=NCBI_GP:EGL42127.1;Name=EGL42127.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_0267;product=Hep/Hag repeat protein;protein_id=EGL42127.1;transl_table=11
AFIJ01000007.1	Genbank	gene	124453	124965	.	-	.	ID=gene-HMPREF1039_0268;Name=HMPREF1039_0268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0268
AFIJ01000007.1	Genbank	CDS	124453	124965	.	-	0	ID=cds-EGL42000.1;Parent=gene-HMPREF1039_0268;Dbxref=NCBI_GP:EGL42000.1;Name=EGL42000.1;Note=identified by match to protein family HMM PF01035%3B match to protein family HMM TIGR00589;gbkey=CDS;locus_tag=HMPREF1039_0268;product=6-O-methylguanine DNA methyltransferase%2C DNA binding domain protein;protein_id=EGL42000.1;transl_table=11
AFIJ01000007.1	Genbank	gene	124965	125168	.	-	.	ID=gene-HMPREF1039_0269;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0269
AFIJ01000007.1	Genbank	CDS	124965	125168	.	-	0	ID=cds-EGL42059.1;Parent=gene-HMPREF1039_0269;Dbxref=NCBI_GP:EGL42059.1;Name=EGL42059.1;Note=identified by match to protein family HMM PF02416%3B match to protein family HMM TIGR01411;gbkey=CDS;gene=tatA;locus_tag=HMPREF1039_0269;product=twin arginine-targeting protein translocase%2C TatA/E family;protein_id=EGL42059.1;transl_table=11
AFIJ01000007.1	Genbank	gene	125237	125980	.	-	.	ID=gene-HMPREF1039_0270;Name=HMPREF1039_0270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0270
AFIJ01000007.1	Genbank	CDS	125237	125980	.	-	0	ID=cds-EGL42098.1;Parent=gene-HMPREF1039_0270;Dbxref=NCBI_GP:EGL42098.1;Name=EGL42098.1;Note=identified by match to protein family HMM TIGR03943;gbkey=CDS;locus_tag=HMPREF1039_0270;product=TIGR03943 family protein;protein_id=EGL42098.1;transl_table=11
AFIJ01000007.1	Genbank	gene	125981	127576	.	-	.	ID=gene-HMPREF1039_0271;Name=HMPREF1039_0271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0271
AFIJ01000007.1	Genbank	CDS	125981	127576	.	-	0	ID=cds-EGL42031.1;Parent=gene-HMPREF1039_0271;Dbxref=NCBI_GP:EGL42031.1;Name=EGL42031.1;Note=identified by match to protein family HMM PF03773;gbkey=CDS;locus_tag=HMPREF1039_0271;product=putative permease;protein_id=EGL42031.1;transl_table=11
AFIJ01000007.1	Genbank	gene	127573	128499	.	-	.	ID=gene-HMPREF1039_0272;Name=HMPREF1039_0272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0272
AFIJ01000007.1	Genbank	CDS	127573	128499	.	-	0	ID=cds-EGL42071.1;Parent=gene-HMPREF1039_0272;Dbxref=NCBI_GP:EGL42071.1;Name=EGL42071.1;Note=identified by match to protein family HMM PF02492;gbkey=CDS;locus_tag=HMPREF1039_0272;product=CobW/P47K family protein;protein_id=EGL42071.1;transl_table=11
AFIJ01000007.1	Genbank	gene	128659	130086	.	-	.	ID=gene-HMPREF1039_0273;Name=HMPREF1039_0273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0273
AFIJ01000007.1	Genbank	CDS	128659	130086	.	-	0	ID=cds-EGL42124.1;Parent=gene-HMPREF1039_0273;Dbxref=NCBI_GP:EGL42124.1;Name=EGL42124.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF1039_0273;product=hypothetical protein;protein_id=EGL42124.1;transl_table=11
AFIJ01000007.1	Genbank	gene	130431	131909	.	-	.	ID=gene-HMPREF1039_0274;Name=HMPREF1039_0274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0274
AFIJ01000007.1	Genbank	CDS	130431	131909	.	-	0	ID=cds-EGL42044.1;Parent=gene-HMPREF1039_0274;Dbxref=NCBI_GP:EGL42044.1;Name=EGL42044.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF1039_0274;product=hypothetical protein;protein_id=EGL42044.1;transl_table=11
AFIJ01000007.1	Genbank	gene	132240	133673	.	-	.	ID=gene-HMPREF1039_0275;Name=HMPREF1039_0275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0275
AFIJ01000007.1	Genbank	CDS	132240	133673	.	-	0	ID=cds-EGL42067.1;Parent=gene-HMPREF1039_0275;Dbxref=NCBI_GP:EGL42067.1;Name=EGL42067.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF1039_0275;product=hypothetical protein;protein_id=EGL42067.1;transl_table=11
AFIJ01000007.1	Genbank	gene	133704	133922	.	+	.	ID=gene-HMPREF1039_0276;Name=HMPREF1039_0276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0276
AFIJ01000007.1	Genbank	CDS	133704	133922	.	+	0	ID=cds-EGL42023.1;Parent=gene-HMPREF1039_0276;Dbxref=NCBI_GP:EGL42023.1;Name=EGL42023.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0276;product=hypothetical protein;protein_id=EGL42023.1;transl_table=11
AFIJ01000007.1	Genbank	gene	134003	135418	.	-	.	ID=gene-HMPREF1039_0277;Name=HMPREF1039_0277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0277
AFIJ01000007.1	Genbank	CDS	134003	135418	.	-	0	ID=cds-EGL42027.1;Parent=gene-HMPREF1039_0277;Dbxref=NCBI_GP:EGL42027.1;Name=EGL42027.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF1039_0277;product=hypothetical protein;protein_id=EGL42027.1;transl_table=11
AFIJ01000007.1	Genbank	gene	135811	135887	.	+	.	ID=gene-HMPREF1039_0278;Name=HMPREF1039_0278;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0278
AFIJ01000007.1	Genbank	tRNA	135811	135887	.	+	.	ID=rna-HMPREF1039_0278;Parent=gene-HMPREF1039_0278;gbkey=tRNA;locus_tag=HMPREF1039_0278;product=tRNA-Pro
AFIJ01000007.1	Genbank	exon	135811	135887	.	+	.	ID=exon-HMPREF1039_0278-1;Parent=rna-HMPREF1039_0278;gbkey=tRNA;locus_tag=HMPREF1039_0278;product=tRNA-Pro
AFIJ01000007.1	Genbank	gene	135898	135971	.	+	.	ID=gene-HMPREF1039_0279;Name=HMPREF1039_0279;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0279
AFIJ01000007.1	Genbank	tRNA	135898	135971	.	+	.	ID=rna-HMPREF1039_0279;Parent=gene-HMPREF1039_0279;gbkey=tRNA;locus_tag=HMPREF1039_0279;product=tRNA-Gly
AFIJ01000007.1	Genbank	exon	135898	135971	.	+	.	ID=exon-HMPREF1039_0279-1;Parent=rna-HMPREF1039_0279;gbkey=tRNA;locus_tag=HMPREF1039_0279;product=tRNA-Gly
AFIJ01000007.1	Genbank	gene	135980	136056	.	+	.	ID=gene-HMPREF1039_0280;Name=HMPREF1039_0280;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_0280
AFIJ01000007.1	Genbank	tRNA	135980	136056	.	+	.	ID=rna-HMPREF1039_0280;Parent=gene-HMPREF1039_0280;gbkey=tRNA;locus_tag=HMPREF1039_0280;product=tRNA-Arg
AFIJ01000007.1	Genbank	exon	135980	136056	.	+	.	ID=exon-HMPREF1039_0280-1;Parent=rna-HMPREF1039_0280;gbkey=tRNA;locus_tag=HMPREF1039_0280;product=tRNA-Arg
AFIJ01000007.1	Genbank	gene	136208	137179	.	-	.	ID=gene-HMPREF1039_0281;Name=HMPREF1039_0281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0281
AFIJ01000007.1	Genbank	CDS	136208	137179	.	-	0	ID=cds-EGL42063.1;Parent=gene-HMPREF1039_0281;Dbxref=NCBI_GP:EGL42063.1;Name=EGL42063.1;Note=identified by match to protein family HMM PF06725%3B match to protein family HMM PF07501;gbkey=CDS;locus_tag=HMPREF1039_0281;product=3D domain protein;protein_id=EGL42063.1;transl_table=11
AFIJ01000007.1	Genbank	gene	137864	139873	.	-	.	ID=gene-HMPREF1039_0282;Name=HMPREF1039_0282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0282
AFIJ01000007.1	Genbank	CDS	137864	139873	.	-	0	ID=cds-EGL42009.1;Parent=gene-HMPREF1039_0282;Dbxref=NCBI_GP:EGL42009.1;Name=EGL42009.1;Note=identified by match to protein family HMM PF00884;gbkey=CDS;locus_tag=HMPREF1039_0282;product=arylsulfatase;protein_id=EGL42009.1;transl_table=11
AFIJ01000007.1	Genbank	gene	139873	140037	.	-	.	ID=gene-HMPREF1039_0283;Name=HMPREF1039_0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0283
AFIJ01000007.1	Genbank	CDS	139873	140037	.	-	0	ID=cds-EGL42096.1;Parent=gene-HMPREF1039_0283;Dbxref=NCBI_GP:EGL42096.1;Name=EGL42096.1;gbkey=CDS;locus_tag=HMPREF1039_0283;product=hypothetical protein;protein_id=EGL42096.1;transl_table=11
AFIJ01000007.1	Genbank	gene	140066	141109	.	-	.	ID=gene-HMPREF1039_0284;Name=HMPREF1039_0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0284
AFIJ01000007.1	Genbank	CDS	140066	141109	.	-	0	ID=cds-EGL42106.1;Parent=gene-HMPREF1039_0284;Dbxref=NCBI_GP:EGL42106.1;Name=EGL42106.1;Note=identified by match to protein family HMM PF00535;gbkey=CDS;locus_tag=HMPREF1039_0284;product=glycosyltransferase%2C group 2 family protein;protein_id=EGL42106.1;transl_table=11
AFIJ01000007.1	Genbank	gene	141142	142092	.	-	.	ID=gene-HMPREF1039_0285;Name=HMPREF1039_0285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0285
AFIJ01000007.1	Genbank	CDS	141142	142092	.	-	0	ID=cds-EGL42018.1;Parent=gene-HMPREF1039_0285;Dbxref=NCBI_GP:EGL42018.1;Name=EGL42018.1;Note=identified by match to protein family HMM PF01075;gbkey=CDS;locus_tag=HMPREF1039_0285;product=Heptosyltransferase;protein_id=EGL42018.1;transl_table=11
AFIJ01000007.1	Genbank	gene	142274	143146	.	-	.	ID=gene-HMPREF1039_0286;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0286
AFIJ01000007.1	Genbank	CDS	142274	143146	.	-	0	ID=cds-EGL42105.1;Parent=gene-HMPREF1039_0286;Dbxref=NCBI_GP:EGL42105.1;Name=EGL42105.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;gene=oppF;locus_tag=HMPREF1039_0286;product=ABC transporter%2C ATP-binding protein;protein_id=EGL42105.1;transl_table=11
AFIJ01000007.1	Genbank	gene	143139	144155	.	-	.	ID=gene-HMPREF1039_0287;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0287
AFIJ01000007.1	Genbank	CDS	143139	144155	.	-	0	ID=cds-EGL42053.1;Parent=gene-HMPREF1039_0287;Dbxref=NCBI_GP:EGL42053.1;Name=EGL42053.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM PF08352%3B match to protein family HMM TIGR01727;gbkey=CDS;gene=oppD;locus_tag=HMPREF1039_0287;product=ABC transporter%2C ATP-binding protein;protein_id=EGL42053.1;transl_table=11
AFIJ01000007.1	Genbank	gene	144148	145716	.	-	.	ID=gene-HMPREF1039_0288;Name=HMPREF1039_0288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0288
AFIJ01000007.1	Genbank	CDS	144148	145716	.	-	0	ID=cds-EGL42046.1;Parent=gene-HMPREF1039_0288;Dbxref=NCBI_GP:EGL42046.1;Name=EGL42046.1;Note=identified by match to protein family HMM PF00496;gbkey=CDS;locus_tag=HMPREF1039_0288;product=ABC transporter%2C substrate-binding protein%2C family 5;protein_id=EGL42046.1;transl_table=11
AFIJ01000007.1	Genbank	gene	145740	146642	.	-	.	ID=gene-HMPREF1039_0289;Name=HMPREF1039_0289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0289
AFIJ01000007.1	Genbank	CDS	145740	146642	.	-	0	ID=cds-EGL42099.1;Parent=gene-HMPREF1039_0289;Dbxref=NCBI_GP:EGL42099.1;Name=EGL42099.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF1039_0289;product=ABC transporter%2C permease protein;protein_id=EGL42099.1;transl_table=11
AFIJ01000007.1	Genbank	gene	146609	147619	.	-	.	ID=gene-HMPREF1039_0290;Name=HMPREF1039_0290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0290
AFIJ01000007.1	Genbank	CDS	146609	147619	.	-	0	ID=cds-EGL42026.1;Parent=gene-HMPREF1039_0290;Dbxref=NCBI_GP:EGL42026.1;Name=EGL42026.1;Note=identified by match to protein family HMM PF00528;gbkey=CDS;locus_tag=HMPREF1039_0290;product=ABC transporter%2C permease protein;protein_id=EGL42026.1;transl_table=11
AFIJ01000007.1	Genbank	gene	147677	147805	.	-	.	ID=gene-HMPREF1039_0291;Name=HMPREF1039_0291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0291
AFIJ01000007.1	Genbank	CDS	147677	147805	.	-	0	ID=cds-EGL42002.1;Parent=gene-HMPREF1039_0291;Dbxref=NCBI_GP:EGL42002.1;Name=EGL42002.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0291;product=hypothetical protein;protein_id=EGL42002.1;transl_table=11
##sequence-region AFIJ01000006.1 1 35744
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000006.1	Genbank	region	1	35744	.	+	.	ID=AFIJ01000006.1:1..35744;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000006.1	Genbank	gene	1	408	.	+	.	ID=gene-HMPREF1039_1446;Name=HMPREF1039_1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1446;partial=true;start_range=.,1
AFIJ01000006.1	Genbank	CDS	1	408	.	+	0	ID=cds-EGL42214.1;Parent=gene-HMPREF1039_1446;Dbxref=NCBI_GP:EGL42214.1;Name=EGL42214.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF00892;gbkey=CDS;locus_tag=HMPREF1039_1446;partial=true;product=putative membrane protein;protein_id=EGL42214.1;start_range=.,1;transl_table=11
AFIJ01000006.1	Genbank	gene	533	1420	.	+	.	ID=gene-HMPREF1039_1447;Name=HMPREF1039_1447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1447
AFIJ01000006.1	Genbank	CDS	533	1420	.	+	0	ID=cds-EGL42202.1;Parent=gene-HMPREF1039_1447;Dbxref=NCBI_GP:EGL42202.1;Name=EGL42202.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF1039_1447;product=radical SAM domain protein;protein_id=EGL42202.1;transl_table=11
AFIJ01000006.1	Genbank	gene	1467	2696	.	-	.	ID=gene-HMPREF1039_1448;Name=HMPREF1039_1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1448
AFIJ01000006.1	Genbank	CDS	1467	2696	.	-	0	ID=cds-EGL42206.1;Parent=gene-HMPREF1039_1448;Dbxref=NCBI_GP:EGL42206.1;Name=EGL42206.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF1039_1448;product=aminotransferase%2C class I/II;protein_id=EGL42206.1;transl_table=11
AFIJ01000006.1	Genbank	gene	2766	3767	.	-	.	ID=gene-HMPREF1039_1449;Name=HMPREF1039_1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1449
AFIJ01000006.1	Genbank	CDS	2766	3767	.	-	0	ID=cds-EGL42219.1;Parent=gene-HMPREF1039_1449;Dbxref=NCBI_GP:EGL42219.1;Name=EGL42219.1;Note=identified by match to protein family HMM PF02277;gbkey=CDS;locus_tag=HMPREF1039_1449;product=putative nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=EGL42219.1;transl_table=11
AFIJ01000006.1	Genbank	gene	3914	4957	.	-	.	ID=gene-HMPREF1039_1450;Name=HMPREF1039_1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1450
AFIJ01000006.1	Genbank	CDS	3914	4957	.	-	0	ID=cds-EGL42227.1;Parent=gene-HMPREF1039_1450;Dbxref=NCBI_GP:EGL42227.1;Name=EGL42227.1;Note=identified by match to protein family HMM PF00465%3B match to protein family HMM PF01761;gbkey=CDS;locus_tag=HMPREF1039_1450;product=3-dehydroquinate synthase;protein_id=EGL42227.1;transl_table=11
AFIJ01000006.1	Genbank	gene	5356	7242	.	+	.	ID=gene-HMPREF1039_1451;Name=cstA;gbkey=Gene;gene=cstA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1451
AFIJ01000006.1	Genbank	CDS	5356	7242	.	+	0	ID=cds-EGL42200.1;Parent=gene-HMPREF1039_1451;Dbxref=NCBI_GP:EGL42200.1;Name=EGL42200.1;Note=identified by match to protein family HMM PF02554;gbkey=CDS;gene=cstA;locus_tag=HMPREF1039_1451;product=carbon starvation protein CstA;protein_id=EGL42200.1;transl_table=11
AFIJ01000006.1	Genbank	gene	7376	7606	.	-	.	ID=gene-HMPREF1039_1452;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=HMPREF1039_1452
AFIJ01000006.1	Genbank	CDS	7376	7606	.	-	0	ID=cds-EGL42211.1;Parent=gene-HMPREF1039_1452;Dbxref=NCBI_GP:EGL42211.1;Name=EGL42211.1;Note=identified by match to protein family HMM PF01084%3B match to protein family HMM TIGR00165;gbkey=CDS;gene=rpsR;locus_tag=HMPREF1039_1452;product=ribosomal protein S18;protein_id=EGL42211.1;transl_table=11
AFIJ01000006.1	Genbank	gene	7650	8063	.	-	.	ID=gene-HMPREF1039_1453;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=HMPREF1039_1453
AFIJ01000006.1	Genbank	CDS	7650	8063	.	-	0	ID=cds-EGL42207.1;Parent=gene-HMPREF1039_1453;Dbxref=NCBI_GP:EGL42207.1;Name=EGL42207.1;Note=identified by match to protein family HMM PF00436%3B match to protein family HMM TIGR00621;gbkey=CDS;gene=ssb;locus_tag=HMPREF1039_1453;product=single-strand binding family protein;protein_id=EGL42207.1;transl_table=11
AFIJ01000006.1	Genbank	gene	8080	8364	.	-	.	ID=gene-HMPREF1039_1454;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1454
AFIJ01000006.1	Genbank	CDS	8080	8364	.	-	0	ID=cds-EGL42204.1;Parent=gene-HMPREF1039_1454;Dbxref=NCBI_GP:EGL42204.1;Name=EGL42204.1;Note=identified by match to protein family HMM PF01250%3B match to protein family HMM TIGR00166;gbkey=CDS;gene=rpsF;locus_tag=HMPREF1039_1454;product=ribosomal protein S6;protein_id=EGL42204.1;transl_table=11
AFIJ01000006.1	Genbank	gene	8481	12224	.	-	.	ID=gene-HMPREF1039_1455;Name=HMPREF1039_1455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1455
AFIJ01000006.1	Genbank	CDS	8481	12224	.	-	0	ID=cds-EGL42217.1;Parent=gene-HMPREF1039_1455;Dbxref=NCBI_GP:EGL42217.1;Name=EGL42217.1;Note=identified by match to protein family HMM PF02769%3B match to protein family HMM TIGR01857;gbkey=CDS;locus_tag=HMPREF1039_1455;product=phosphoribosylformylglycinamidine synthase;protein_id=EGL42217.1;transl_table=11
AFIJ01000006.1	Genbank	gene	12436	13032	.	+	.	ID=gene-HMPREF1039_1456;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=protein_coding;locus_tag=HMPREF1039_1456
AFIJ01000006.1	Genbank	CDS	12436	13032	.	+	0	ID=cds-EGL42226.1;Parent=gene-HMPREF1039_1456;Dbxref=NCBI_GP:EGL42226.1;Name=EGL42226.1;Note=identified by match to protein family HMM PF00156%3B match to protein family HMM TIGR01744;gbkey=CDS;gene=xpt;locus_tag=HMPREF1039_1456;product=xanthine phosphoribosyltransferase;protein_id=EGL42226.1;transl_table=11
AFIJ01000006.1	Genbank	gene	13029	13640	.	+	.	ID=gene-HMPREF1039_1457;Name=HMPREF1039_1457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1457
AFIJ01000006.1	Genbank	CDS	13029	13640	.	+	0	ID=cds-EGL42209.1;Parent=gene-HMPREF1039_1457;Dbxref=NCBI_GP:EGL42209.1;Name=EGL42209.1;gbkey=CDS;locus_tag=HMPREF1039_1457;product=hypothetical protein;protein_id=EGL42209.1;transl_table=11
AFIJ01000006.1	Genbank	gene	13701	15047	.	-	.	ID=gene-HMPREF1039_1458;Name=HMPREF1039_1458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1458
AFIJ01000006.1	Genbank	CDS	13701	15047	.	-	0	ID=cds-EGL42221.1;Parent=gene-HMPREF1039_1458;Dbxref=NCBI_GP:EGL42221.1;Name=EGL42221.1;Note=identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF1039_1458;product=butyryl-CoA:acetate CoA-transferase;protein_id=EGL42221.1;transl_table=11
AFIJ01000006.1	Genbank	gene	15163	16452	.	-	.	ID=gene-HMPREF1039_1459;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=HMPREF1039_1459
AFIJ01000006.1	Genbank	CDS	15163	16452	.	-	0	ID=cds-EGL42201.1;Parent=gene-HMPREF1039_1459;Dbxref=NCBI_GP:EGL42201.1;Name=EGL42201.1;Note=identified by match to protein family HMM PF00309%3B match to protein family HMM PF04552%3B match to protein family HMM PF04963%3B match to protein family HMM TIGR02395;gbkey=CDS;gene=rpoN;locus_tag=HMPREF1039_1459;product=RNA polymerase sigma-54 factor;protein_id=EGL42201.1;transl_table=11
AFIJ01000006.1	Genbank	gene	16723	17670	.	-	.	ID=gene-HMPREF1039_1460;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1460
AFIJ01000006.1	Genbank	CDS	16723	17670	.	-	0	ID=cds-EGL42198.1;Parent=gene-HMPREF1039_1460;Dbxref=NCBI_GP:EGL42198.1;Name=EGL42198.1;Note=identified by match to protein family HMM PF00389%3B match to protein family HMM PF02826;gbkey=CDS;gene=pdxB;locus_tag=HMPREF1039_1460;product=4-phosphoerythronate dehydrogenase;protein_id=EGL42198.1;transl_table=11
AFIJ01000006.1	Genbank	gene	17790	18344	.	-	.	ID=gene-HMPREF1039_1461;Name=HMPREF1039_1461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1461
AFIJ01000006.1	Genbank	CDS	17790	18344	.	-	0	ID=cds-EGL42223.1;Parent=gene-HMPREF1039_1461;Dbxref=NCBI_GP:EGL42223.1;Name=EGL42223.1;Note=identified by match to protein family HMM PF00929;gbkey=CDS;locus_tag=HMPREF1039_1461;product=DNA polymerase III%2C epsilon subunit;protein_id=EGL42223.1;transl_table=11
AFIJ01000006.1	Genbank	gene	18417	19145	.	+	.	ID=gene-HMPREF1039_1462;Name=HMPREF1039_1462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1462
AFIJ01000006.1	Genbank	CDS	18417	19145	.	+	0	ID=cds-EGL42212.1;Parent=gene-HMPREF1039_1462;Dbxref=NCBI_GP:EGL42212.1;Name=EGL42212.1;Note=identified by match to protein family HMM PF01863;gbkey=CDS;locus_tag=HMPREF1039_1462;product=hypothetical protein;protein_id=EGL42212.1;transl_table=11
AFIJ01000006.1	Genbank	gene	19198	20124	.	-	.	ID=gene-HMPREF1039_1463;Name=HMPREF1039_1463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1463
AFIJ01000006.1	Genbank	CDS	19198	20124	.	-	0	ID=cds-EGL42216.1;Parent=gene-HMPREF1039_1463;Dbxref=NCBI_GP:EGL42216.1;Name=EGL42216.1;Note=identified by match to protein family HMM PF01551;gbkey=CDS;locus_tag=HMPREF1039_1463;product=peptidase%2C M23 family;protein_id=EGL42216.1;transl_table=11
AFIJ01000006.1	Genbank	gene	20143	20670	.	-	.	ID=gene-HMPREF1039_1464;Name=HMPREF1039_1464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1464
AFIJ01000006.1	Genbank	CDS	20143	20670	.	-	0	ID=cds-EGL42218.1;Parent=gene-HMPREF1039_1464;Dbxref=NCBI_GP:EGL42218.1;Name=EGL42218.1;gbkey=CDS;locus_tag=HMPREF1039_1464;product=hypothetical protein;protein_id=EGL42218.1;transl_table=11
AFIJ01000006.1	Genbank	gene	20712	21629	.	-	.	ID=gene-HMPREF1039_1465;Name=HMPREF1039_1465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1465
AFIJ01000006.1	Genbank	CDS	20712	21629	.	-	0	ID=cds-EGL42213.1;Parent=gene-HMPREF1039_1465;Dbxref=NCBI_GP:EGL42213.1;Name=EGL42213.1;Note=identified by match to protein family HMM PF02195%3B match to protein family HMM TIGR00180;gbkey=CDS;locus_tag=HMPREF1039_1465;product=ParB-like protein;protein_id=EGL42213.1;transl_table=11
AFIJ01000006.1	Genbank	gene	21619	22395	.	-	.	ID=gene-HMPREF1039_1466;Name=soj;gbkey=Gene;gene=soj;gene_biotype=protein_coding;locus_tag=HMPREF1039_1466
AFIJ01000006.1	Genbank	CDS	21619	22395	.	-	0	ID=cds-EGL42208.1;Parent=gene-HMPREF1039_1466;Dbxref=NCBI_GP:EGL42208.1;Name=EGL42208.1;Note=identified by match to protein family HMM PF01656;gbkey=CDS;gene=soj;locus_tag=HMPREF1039_1466;product=sporulation initiation inhibitor protein Soj;protein_id=EGL42208.1;transl_table=11
AFIJ01000006.1	Genbank	gene	22573	23229	.	+	.	ID=gene-HMPREF1039_1467;Name=HMPREF1039_1467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1467
AFIJ01000006.1	Genbank	CDS	22573	23229	.	+	0	ID=cds-EGL42205.1;Parent=gene-HMPREF1039_1467;Dbxref=NCBI_GP:EGL42205.1;Name=EGL42205.1;gbkey=CDS;locus_tag=HMPREF1039_1467;product=hypothetical protein;protein_id=EGL42205.1;transl_table=11
AFIJ01000006.1	Genbank	gene	23398	24648	.	-	.	ID=gene-HMPREF1039_1468;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=HMPREF1039_1468
AFIJ01000006.1	Genbank	CDS	23398	24648	.	-	0	ID=cds-EGL42215.1;Parent=gene-HMPREF1039_1468;Dbxref=NCBI_GP:EGL42215.1;Name=EGL42215.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF00709%3B match to protein family HMM TIGR00184;gbkey=CDS;gene=purA;locus_tag=HMPREF1039_1468;product=adenylosuccinate synthase;protein_id=EGL42215.1;transl_table=11
AFIJ01000006.1	Genbank	gene	24907	26013	.	+	.	ID=gene-HMPREF1039_1469;Name=HMPREF1039_1469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1469
AFIJ01000006.1	Genbank	CDS	24907	26013	.	+	0	ID=cds-EGL42225.1;Parent=gene-HMPREF1039_1469;Dbxref=NCBI_GP:EGL42225.1;Name=EGL42225.1;Note=identified by match to protein family HMM PF00724;gbkey=CDS;locus_tag=HMPREF1039_1469;product=oxidoreductase%2C FAD/FMN-binding protein;protein_id=EGL42225.1;transl_table=11
AFIJ01000006.1	Genbank	gene	26097	26753	.	+	.	ID=gene-HMPREF1039_1470;Name=HMPREF1039_1470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1470
AFIJ01000006.1	Genbank	CDS	26097	26753	.	+	0	ID=cds-EGL42222.1;Parent=gene-HMPREF1039_1470;Dbxref=NCBI_GP:EGL42222.1;Name=EGL42222.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1470;product=hypothetical protein;protein_id=EGL42222.1;transl_table=11
AFIJ01000006.1	Genbank	gene	26755	27162	.	+	.	ID=gene-HMPREF1039_1471;Name=HMPREF1039_1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1471
AFIJ01000006.1	Genbank	CDS	26755	27162	.	+	0	ID=cds-EGL42210.1;Parent=gene-HMPREF1039_1471;Dbxref=NCBI_GP:EGL42210.1;Name=EGL42210.1;Note=identified by match to protein family HMM PF09579;gbkey=CDS;locus_tag=HMPREF1039_1471;product=sporulation protein YtfJ;protein_id=EGL42210.1;transl_table=11
AFIJ01000006.1	Genbank	gene	27311	27703	.	+	.	ID=gene-HMPREF1039_1472;Name=HMPREF1039_1472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1472
AFIJ01000006.1	Genbank	CDS	27311	27703	.	+	0	ID=cds-EGL42203.1;Parent=gene-HMPREF1039_1472;Dbxref=NCBI_GP:EGL42203.1;Name=EGL42203.1;Note=identified by match to protein family HMM PF03938;gbkey=CDS;locus_tag=HMPREF1039_1472;product=outer membrane protein;protein_id=EGL42203.1;transl_table=11
AFIJ01000006.1	Genbank	gene	27858	28145	.	+	.	ID=gene-HMPREF1039_1473;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=HMPREF1039_1473
AFIJ01000006.1	Genbank	CDS	27858	28145	.	+	0	ID=cds-EGL42199.1;Parent=gene-HMPREF1039_1473;Dbxref=NCBI_GP:EGL42199.1;Name=EGL42199.1;Note=identified by match to protein family HMM PF02583;gbkey=CDS;gene=csoR;locus_tag=HMPREF1039_1473;product=copper-sensing transcriptional repressor CsoR;protein_id=EGL42199.1;transl_table=11
AFIJ01000006.1	Genbank	gene	28155	30926	.	+	.	ID=gene-HMPREF1039_1474;Name=HMPREF1039_1474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1474
AFIJ01000006.1	Genbank	CDS	28155	30926	.	+	0	ID=cds-EGL42224.1;Parent=gene-HMPREF1039_1474;Dbxref=NCBI_GP:EGL42224.1;Name=EGL42224.1;Note=identified by match to protein family HMM PF00122%3B match to protein family HMM PF00403%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR00003%3B match to protein family HMM TIGR01494%3B match to protein family HMM TIGR01511%3B match to protein family HMM TIGR01525;gbkey=CDS;locus_tag=HMPREF1039_1474;product=copper-exporting ATPase;protein_id=EGL42224.1;transl_table=11
AFIJ01000006.1	Genbank	gene	31006	35744	.	-	.	ID=gene-HMPREF1039_1475;Name=HMPREF1039_1475;end_range=35744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1475;partial=true
AFIJ01000006.1	Genbank	CDS	31006	35744	.	-	2	ID=cds-EGL42220.1;Parent=gene-HMPREF1039_1475;Dbxref=NCBI_GP:EGL42220.1;Name=EGL42220.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05662;end_range=35744,.;gbkey=CDS;locus_tag=HMPREF1039_1475;partial=true;product=hemagglutinin;protein_id=EGL42220.1;transl_table=11
##sequence-region AFIJ01000005.1 1 10272
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000005.1	Genbank	region	1	10272	.	+	.	ID=AFIJ01000005.1:1..10272;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000005.1	Genbank	gene	1	2495	.	-	.	ID=gene-HMPREF1039_1599;Name=HMPREF1039_1599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1599;partial=true;start_range=.,1
AFIJ01000005.1	Genbank	CDS	1	2495	.	-	0	ID=cds-EGL42281.1;Parent=gene-HMPREF1039_1599;Dbxref=NCBI_GP:EGL42281.1;Name=EGL42281.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1599;partial=true;product=Hep/Hag repeat protein;protein_id=EGL42281.1;start_range=.,1;transl_table=11
AFIJ01000005.1	Genbank	gene	2621	2764	.	-	.	ID=gene-HMPREF1039_1600;Name=HMPREF1039_1600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1600
AFIJ01000005.1	Genbank	CDS	2621	2764	.	-	0	ID=cds-EGL42280.1;Parent=gene-HMPREF1039_1600;Dbxref=NCBI_GP:EGL42280.1;Name=EGL42280.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1600;product=hypothetical protein;protein_id=EGL42280.1;transl_table=11
AFIJ01000005.1	Genbank	gene	2857	8631	.	-	.	ID=gene-HMPREF1039_1601;Name=HMPREF1039_1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1601
AFIJ01000005.1	Genbank	CDS	2857	8631	.	-	0	ID=cds-EGL42277.1;Parent=gene-HMPREF1039_1601;Dbxref=NCBI_GP:EGL42277.1;Name=EGL42277.1;Note=identified by match to protein family HMM PF05658%3B match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1601;product=Hep/Hag repeat protein;protein_id=EGL42277.1;transl_table=11
AFIJ01000005.1	Genbank	gene	8682	8801	.	-	.	ID=gene-HMPREF1039_1602;Name=HMPREF1039_1602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1602
AFIJ01000005.1	Genbank	CDS	8682	8801	.	-	0	ID=cds-EGL42279.1;Parent=gene-HMPREF1039_1602;Dbxref=NCBI_GP:EGL42279.1;Name=EGL42279.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1602;product=hypothetical protein;protein_id=EGL42279.1;transl_table=11
AFIJ01000005.1	Genbank	gene	9140	9880	.	-	.	ID=gene-HMPREF1039_1603;Name=HMPREF1039_1603;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1603
AFIJ01000005.1	Genbank	CDS	9140	9880	.	-	0	ID=cds-EGL42278.1;Parent=gene-HMPREF1039_1603;Dbxref=NCBI_GP:EGL42278.1;Name=EGL42278.1;Note=identified by match to protein family HMM PF05662;gbkey=CDS;locus_tag=HMPREF1039_1603;product=hemagglutinin;protein_id=EGL42278.1;transl_table=11
AFIJ01000005.1	Genbank	gene	9899	10272	.	-	.	ID=gene-HMPREF1039_1604;Name=HMPREF1039_1604;end_range=10272,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1604;partial=true
AFIJ01000005.1	Genbank	CDS	9899	10272	.	-	2	ID=cds-EGL42282.1;Parent=gene-HMPREF1039_1604;Dbxref=NCBI_GP:EGL42282.1;Name=EGL42282.1;Note=identified by match to protein family HMM PF01391;end_range=10272,.;gbkey=CDS;locus_tag=HMPREF1039_1604;partial=true;product=collagen triple helix repeat protein;protein_id=EGL42282.1;transl_table=11
##sequence-region AFIJ01000004.1 1 100595
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000004.1	Genbank	region	1	100595	.	+	.	ID=AFIJ01000004.1:1..100595;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000004.1	Genbank	gene	590	775	.	+	.	ID=gene-HMPREF1039_0767;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0767
AFIJ01000004.1	Genbank	CDS	590	775	.	+	0	ID=cds-EGL42360.1;Parent=gene-HMPREF1039_0767;Dbxref=NCBI_GP:EGL42360.1;Name=EGL42360.1;Note=identified by match to protein family HMM PF01783%3B match to protein family HMM TIGR01031;gbkey=CDS;gene=rpmF;locus_tag=HMPREF1039_0767;product=ribosomal protein L32;protein_id=EGL42360.1;transl_table=11
AFIJ01000004.1	Genbank	gene	909	1409	.	+	.	ID=gene-HMPREF1039_0768;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0768
AFIJ01000004.1	Genbank	CDS	909	1409	.	+	0	ID=cds-EGL42374.1;Parent=gene-HMPREF1039_0768;Dbxref=NCBI_GP:EGL42374.1;Name=EGL42374.1;Note=identified by match to protein family HMM PF02075%3B match to protein family HMM TIGR00228;gbkey=CDS;gene=ruvC;locus_tag=HMPREF1039_0768;product=crossover junction endodeoxyribonuclease RuvC;protein_id=EGL42374.1;transl_table=11
AFIJ01000004.1	Genbank	gene	1406	2008	.	+	.	ID=gene-HMPREF1039_0769;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0769
AFIJ01000004.1	Genbank	CDS	1406	2008	.	+	0	ID=cds-EGL42345.1;Parent=gene-HMPREF1039_0769;Dbxref=NCBI_GP:EGL42345.1;Name=EGL42345.1;Note=identified by match to protein family HMM PF01330%3B match to protein family HMM PF07499%3B match to protein family HMM TIGR00084;gbkey=CDS;gene=ruvA;locus_tag=HMPREF1039_0769;product=Holliday junction DNA helicase RuvA;protein_id=EGL42345.1;transl_table=11
AFIJ01000004.1	Genbank	gene	2011	3027	.	+	.	ID=gene-HMPREF1039_0770;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0770
AFIJ01000004.1	Genbank	CDS	2011	3027	.	+	0	ID=cds-EGL42380.1;Parent=gene-HMPREF1039_0770;Dbxref=NCBI_GP:EGL42380.1;Name=EGL42380.1;Note=identified by match to protein family HMM PF00004%3B match to protein family HMM PF01078%3B match to protein family HMM PF05491%3B match to protein family HMM PF05496%3B match to protein family HMM PF07728%3B match to protein family HMM TIGR00635;gbkey=CDS;gene=ruvB;locus_tag=HMPREF1039_0770;product=Holliday junction DNA helicase RuvB;protein_id=EGL42380.1;transl_table=11
AFIJ01000004.1	Genbank	gene	3066	4307	.	+	.	ID=gene-HMPREF1039_0771;Name=HMPREF1039_0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0771
AFIJ01000004.1	Genbank	CDS	3066	4307	.	+	0	ID=cds-EGL42376.1;Parent=gene-HMPREF1039_0771;Dbxref=NCBI_GP:EGL42376.1;Name=EGL42376.1;Note=identified by match to protein family HMM PF08486%3B match to protein family HMM TIGR02669;gbkey=CDS;locus_tag=HMPREF1039_0771;product=SpoIID/LytB domain protein;protein_id=EGL42376.1;transl_table=11
AFIJ01000004.1	Genbank	gene	4321	5340	.	+	.	ID=gene-HMPREF1039_0772;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0772
AFIJ01000004.1	Genbank	CDS	4321	5340	.	+	0	ID=cds-EGL42367.1;Parent=gene-HMPREF1039_0772;Dbxref=NCBI_GP:EGL42367.1;Name=EGL42367.1;Note=identified by match to protein family HMM PF02547%3B match to protein family HMM TIGR00113;gbkey=CDS;gene=queA;locus_tag=HMPREF1039_0772;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=EGL42367.1;transl_table=11
AFIJ01000004.1	Genbank	gene	5353	6459	.	+	.	ID=gene-HMPREF1039_0773;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=HMPREF1039_0773
AFIJ01000004.1	Genbank	CDS	5353	6459	.	+	0	ID=cds-EGL42401.1;Parent=gene-HMPREF1039_0773;Dbxref=NCBI_GP:EGL42401.1;Name=EGL42401.1;Note=identified by match to protein family HMM PF01702%3B match to protein family HMM TIGR00430%3B match to protein family HMM TIGR00449;gbkey=CDS;gene=tgt;locus_tag=HMPREF1039_0773;product=tRNA-guanine transglycosylase;protein_id=EGL42401.1;transl_table=11
AFIJ01000004.1	Genbank	gene	6687	6956	.	+	.	ID=gene-HMPREF1039_0774;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0774
AFIJ01000004.1	Genbank	CDS	6687	6956	.	+	0	ID=cds-EGL42343.1;Parent=gene-HMPREF1039_0774;Dbxref=NCBI_GP:EGL42343.1;Name=EGL42343.1;Note=identified by match to protein family HMM PF02699%3B match to protein family HMM TIGR00739;gbkey=CDS;gene=yajC;locus_tag=HMPREF1039_0774;product=preprotein translocase%2C YajC subunit;protein_id=EGL42343.1;transl_table=11
AFIJ01000004.1	Genbank	gene	6961	7530	.	+	.	ID=gene-HMPREF1039_0775;Name=HMPREF1039_0775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0775
AFIJ01000004.1	Genbank	CDS	6961	7530	.	+	0	ID=cds-EGL42327.1;Parent=gene-HMPREF1039_0775;Dbxref=NCBI_GP:EGL42327.1;Name=EGL42327.1;Note=identified by match to protein family HMM PF01812%3B match to protein family HMM TIGR02727;gbkey=CDS;locus_tag=HMPREF1039_0775;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=EGL42327.1;transl_table=11
AFIJ01000004.1	Genbank	gene	7555	8856	.	+	.	ID=gene-HMPREF1039_0776;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0776
AFIJ01000004.1	Genbank	CDS	7555	8856	.	+	0	ID=cds-EGL42333.1;Parent=gene-HMPREF1039_0776;Dbxref=NCBI_GP:EGL42333.1;Name=EGL42333.1;Note=identified by match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR01129;gbkey=CDS;gene=secD;locus_tag=HMPREF1039_0776;product=export membrane protein SecD;protein_id=EGL42333.1;transl_table=11
AFIJ01000004.1	Genbank	gene	8853	9812	.	+	.	ID=gene-HMPREF1039_0777;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=HMPREF1039_0777
AFIJ01000004.1	Genbank	CDS	8853	9812	.	+	0	ID=cds-EGL42337.1;Parent=gene-HMPREF1039_0777;Dbxref=NCBI_GP:EGL42337.1;Name=EGL42337.1;Note=identified by match to protein family HMM PF02355%3B match to protein family HMM PF07549%3B match to protein family HMM TIGR00916%3B match to protein family HMM TIGR00966;gbkey=CDS;gene=secF;locus_tag=HMPREF1039_0777;product=export membrane protein SecF;protein_id=EGL42337.1;transl_table=11
AFIJ01000004.1	Genbank	gene	9848	10222	.	+	.	ID=gene-HMPREF1039_0778;Name=HMPREF1039_0778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0778
AFIJ01000004.1	Genbank	CDS	9848	10222	.	+	0	ID=cds-EGL42364.1;Parent=gene-HMPREF1039_0778;Dbxref=NCBI_GP:EGL42364.1;Name=EGL42364.1;gbkey=CDS;locus_tag=HMPREF1039_0778;product=hypothetical protein;protein_id=EGL42364.1;transl_table=11
AFIJ01000004.1	Genbank	gene	10345	10884	.	+	.	ID=gene-HMPREF1039_0779;Name=HMPREF1039_0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0779
AFIJ01000004.1	Genbank	CDS	10345	10884	.	+	0	ID=cds-EGL42390.1;Parent=gene-HMPREF1039_0779;Dbxref=NCBI_GP:EGL42390.1;Name=EGL42390.1;Note=identified by match to protein family HMM PF02632;gbkey=CDS;locus_tag=HMPREF1039_0779;product=BioY family protein;protein_id=EGL42390.1;transl_table=11
AFIJ01000004.1	Genbank	gene	10985	11692	.	+	.	ID=gene-HMPREF1039_0780;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0780
AFIJ01000004.1	Genbank	CDS	10985	11692	.	+	0	ID=cds-EGL42340.1;Parent=gene-HMPREF1039_0780;Dbxref=NCBI_GP:EGL42340.1;Name=EGL42340.1;Note=identified by match to protein family HMM PF01048%3B match to protein family HMM TIGR00107;gbkey=CDS;gene=deoD;locus_tag=HMPREF1039_0780;product=purine nucleoside phosphorylase;protein_id=EGL42340.1;transl_table=11
AFIJ01000004.1	Genbank	gene	11707	12036	.	+	.	ID=gene-HMPREF1039_0781;Name=HMPREF1039_0781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0781
AFIJ01000004.1	Genbank	CDS	11707	12036	.	+	0	ID=cds-EGL42330.1;Parent=gene-HMPREF1039_0781;Dbxref=NCBI_GP:EGL42330.1;Name=EGL42330.1;Note=identified by match to protein family HMM PF01242;gbkey=CDS;locus_tag=HMPREF1039_0781;product=putative queuosine biosynthesis protein QueD;protein_id=EGL42330.1;transl_table=11
AFIJ01000004.1	Genbank	gene	12026	12658	.	+	.	ID=gene-HMPREF1039_0782;Name=HMPREF1039_0782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0782
AFIJ01000004.1	Genbank	CDS	12026	12658	.	+	0	ID=cds-EGL42377.1;Parent=gene-HMPREF1039_0782;Dbxref=NCBI_GP:EGL42377.1;Name=EGL42377.1;Note=identified by match to protein family HMM PF04055;gbkey=CDS;locus_tag=HMPREF1039_0782;product=putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE;protein_id=EGL42377.1;transl_table=11
AFIJ01000004.1	Genbank	gene	12804	13637	.	+	.	ID=gene-HMPREF1039_0783;Name=HMPREF1039_0783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0783
AFIJ01000004.1	Genbank	CDS	12804	13637	.	+	0	ID=cds-EGL42388.1;Parent=gene-HMPREF1039_0783;Dbxref=NCBI_GP:EGL42388.1;Name=EGL42388.1;Note=identified by match to protein family HMM PF01243;gbkey=CDS;locus_tag=HMPREF1039_0783;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=EGL42388.1;transl_table=11
AFIJ01000004.1	Genbank	gene	13641	14648	.	+	.	ID=gene-HMPREF1039_0784;Name=HMPREF1039_0784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0784
AFIJ01000004.1	Genbank	CDS	13641	14648	.	+	0	ID=cds-EGL42349.1;Parent=gene-HMPREF1039_0784;Dbxref=NCBI_GP:EGL42349.1;Name=EGL42349.1;Note=identified by match to protein family HMM PF00165;gbkey=CDS;locus_tag=HMPREF1039_0784;product=transcriptional regulator%2C AraC family;protein_id=EGL42349.1;transl_table=11
AFIJ01000004.1	Genbank	gene	14720	15544	.	-	.	ID=gene-HMPREF1039_0785;Name=HMPREF1039_0785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0785
AFIJ01000004.1	Genbank	CDS	14720	15544	.	-	0	ID=cds-EGL42400.1;Parent=gene-HMPREF1039_0785;Dbxref=NCBI_GP:EGL42400.1;Name=EGL42400.1;Note=identified by match to protein family HMM PF00702%3B match to protein family HMM PF05116%3B match to protein family HMM PF08282%3B match to protein family HMM TIGR00099%3B match to protein family HMM TIGR01484;gbkey=CDS;locus_tag=HMPREF1039_0785;product=Cof-like hydrolase;protein_id=EGL42400.1;transl_table=11
AFIJ01000004.1	Genbank	gene	15619	17127	.	+	.	ID=gene-HMPREF1039_0786;Name=HMPREF1039_0786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0786
AFIJ01000004.1	Genbank	CDS	15619	17127	.	+	0	ID=cds-EGL42405.1;Parent=gene-HMPREF1039_0786;Dbxref=NCBI_GP:EGL42405.1;Name=EGL42405.1;Note=identified by match to protein family HMM PF02878%3B match to protein family HMM PF02879;gbkey=CDS;locus_tag=HMPREF1039_0786;product=phosphoglucomutase/phosphomannomutase%2C alpha/beta/alpha domain II;protein_id=EGL42405.1;transl_table=11
AFIJ01000004.1	Genbank	gene	17509	18420	.	-	.	ID=gene-HMPREF1039_0787;Name=HMPREF1039_0787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0787
AFIJ01000004.1	Genbank	CDS	17509	18420	.	-	0	ID=cds-EGL42350.1;Parent=gene-HMPREF1039_0787;Dbxref=NCBI_GP:EGL42350.1;Name=EGL42350.1;Note=identified by match to protein family HMM PF00126%3B match to protein family HMM PF03466;gbkey=CDS;locus_tag=HMPREF1039_0787;product=LysR substrate binding domain protein;protein_id=EGL42350.1;transl_table=11
AFIJ01000004.1	Genbank	gene	18866	22387	.	+	.	ID=gene-HMPREF1039_0788;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0788
AFIJ01000004.1	Genbank	CDS	18866	22387	.	+	0	ID=cds-EGL42339.1;Parent=gene-HMPREF1039_0788;Dbxref=NCBI_GP:EGL42339.1;Name=EGL42339.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01558%3B match to protein family HMM PF01855%3B match to protein family HMM TIGR02176;gbkey=CDS;gene=nifJ;locus_tag=HMPREF1039_0788;product=pyruvate synthase;protein_id=EGL42339.1;transl_table=11
AFIJ01000004.1	Genbank	gene	22557	23027	.	+	.	ID=gene-HMPREF1039_0789;Name=HMPREF1039_0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0789
AFIJ01000004.1	Genbank	CDS	22557	23027	.	+	0	ID=cds-EGL42394.1;Parent=gene-HMPREF1039_0789;Dbxref=NCBI_GP:EGL42394.1;Name=EGL42394.1;gbkey=CDS;locus_tag=HMPREF1039_0789;product=hypothetical protein;protein_id=EGL42394.1;transl_table=11
AFIJ01000004.1	Genbank	gene	23106	23651	.	-	.	ID=gene-HMPREF1039_0790;Name=HMPREF1039_0790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0790
AFIJ01000004.1	Genbank	CDS	23106	23651	.	-	0	ID=cds-EGL42375.1;Parent=gene-HMPREF1039_0790;Dbxref=NCBI_GP:EGL42375.1;Name=EGL42375.1;Note=identified by match to protein family HMM PF00301%3B match to protein family HMM PF02915;gbkey=CDS;locus_tag=HMPREF1039_0790;product=rubredoxin;protein_id=EGL42375.1;transl_table=11
AFIJ01000004.1	Genbank	gene	23938	25407	.	+	.	ID=gene-HMPREF1039_0791;Name=HMPREF1039_0791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0791
AFIJ01000004.1	Genbank	CDS	23938	25407	.	+	0	ID=cds-EGL42362.1;Parent=gene-HMPREF1039_0791;Dbxref=NCBI_GP:EGL42362.1;Name=EGL42362.1;gbkey=CDS;locus_tag=HMPREF1039_0791;product=hypothetical protein;protein_id=EGL42362.1;transl_table=11
AFIJ01000004.1	Genbank	gene	25463	26800	.	+	.	ID=gene-HMPREF1039_0792;Name=HMPREF1039_0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0792
AFIJ01000004.1	Genbank	CDS	25463	26800	.	+	0	ID=cds-EGL42391.1;Parent=gene-HMPREF1039_0792;Dbxref=NCBI_GP:EGL42391.1;Name=EGL42391.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0792;product=hypothetical protein;protein_id=EGL42391.1;transl_table=11
AFIJ01000004.1	Genbank	gene	27368	27943	.	+	.	ID=gene-HMPREF1039_0793;Name=HMPREF1039_0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0793
AFIJ01000004.1	Genbank	CDS	27368	27943	.	+	0	ID=cds-EGL42381.1;Parent=gene-HMPREF1039_0793;Dbxref=NCBI_GP:EGL42381.1;Name=EGL42381.1;gbkey=CDS;locus_tag=HMPREF1039_0793;product=hypothetical protein;protein_id=EGL42381.1;transl_table=11
AFIJ01000004.1	Genbank	gene	28001	29245	.	+	.	ID=gene-HMPREF1039_0794;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=HMPREF1039_0794
AFIJ01000004.1	Genbank	CDS	28001	29245	.	+	0	ID=cds-EGL42402.1;Parent=gene-HMPREF1039_0794;Dbxref=NCBI_GP:EGL42402.1;Name=EGL42402.1;Note=identified by match to protein family HMM PF01966;gbkey=CDS;gene=dgt;locus_tag=HMPREF1039_0794;product=putative dGTPase;protein_id=EGL42402.1;transl_table=11
AFIJ01000004.1	Genbank	gene	29258	29485	.	+	.	ID=gene-HMPREF1039_0795;Name=HMPREF1039_0795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0795
AFIJ01000004.1	Genbank	CDS	29258	29485	.	+	0	ID=cds-EGL42368.1;Parent=gene-HMPREF1039_0795;Dbxref=NCBI_GP:EGL42368.1;Name=EGL42368.1;Note=identified by match to protein family HMM PF07866;gbkey=CDS;locus_tag=HMPREF1039_0795;product=hypothetical protein;protein_id=EGL42368.1;transl_table=11
AFIJ01000004.1	Genbank	gene	29563	29769	.	-	.	ID=gene-HMPREF1039_0796;Name=HMPREF1039_0796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0796
AFIJ01000004.1	Genbank	CDS	29563	29769	.	-	0	ID=cds-EGL42378.1;Parent=gene-HMPREF1039_0796;Dbxref=NCBI_GP:EGL42378.1;Name=EGL42378.1;Note=identified by match to protein family HMM PF08984%3B match to protein family HMM TIGR03980;gbkey=CDS;locus_tag=HMPREF1039_0796;product=hydrid cluster protein-associated redox disulfide domain protein;protein_id=EGL42378.1;transl_table=11
AFIJ01000004.1	Genbank	gene	30011	30442	.	+	.	ID=gene-HMPREF1039_0797;Name=HMPREF1039_0797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0797
AFIJ01000004.1	Genbank	CDS	30011	30442	.	+	0	ID=cds-EGL42325.1;Parent=gene-HMPREF1039_0797;Dbxref=NCBI_GP:EGL42325.1;Name=EGL42325.1;Note=identified by match to protein family HMM PF09148;gbkey=CDS;locus_tag=HMPREF1039_0797;product=hypothetical protein;protein_id=EGL42325.1;transl_table=11
AFIJ01000004.1	Genbank	gene	30442	32106	.	+	.	ID=gene-HMPREF1039_0798;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0798
AFIJ01000004.1	Genbank	CDS	30442	32106	.	+	0	ID=cds-EGL42407.1;Parent=gene-HMPREF1039_0798;Dbxref=NCBI_GP:EGL42407.1;Name=EGL42407.1;Note=identified by match to protein family HMM PF00750%3B match to protein family HMM PF03485%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00456;gbkey=CDS;gene=argS;locus_tag=HMPREF1039_0798;product=arginine--tRNA ligase;protein_id=EGL42407.1;transl_table=11
AFIJ01000004.1	Genbank	gene	32169	33782	.	+	.	ID=gene-HMPREF1039_0799;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0799
AFIJ01000004.1	Genbank	CDS	32169	33782	.	+	0	ID=cds-EGL42395.1;Parent=gene-HMPREF1039_0799;Dbxref=NCBI_GP:EGL42395.1;Name=EGL42395.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM PF06418%3B match to protein family HMM TIGR00337;gbkey=CDS;gene=pyrG;locus_tag=HMPREF1039_0799;product=CTP synthase;protein_id=EGL42395.1;transl_table=11
AFIJ01000004.1	Genbank	gene	34420	35760	.	+	.	ID=gene-HMPREF1039_0800;Name=rnfC;gbkey=Gene;gene=rnfC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0800
AFIJ01000004.1	Genbank	CDS	34420	35760	.	+	0	ID=cds-EGL42331.1;Parent=gene-HMPREF1039_0800;Dbxref=NCBI_GP:EGL42331.1;Name=EGL42331.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF01512%3B match to protein family HMM TIGR01945;gbkey=CDS;gene=rnfC;locus_tag=HMPREF1039_0800;product=electron transport complex%2C RnfABCDGE type%2C C subunit;protein_id=EGL42331.1;transl_table=11
AFIJ01000004.1	Genbank	gene	35789	36814	.	+	.	ID=gene-HMPREF1039_0801;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=HMPREF1039_0801
AFIJ01000004.1	Genbank	CDS	35789	36814	.	+	0	ID=cds-EGL42409.1;Parent=gene-HMPREF1039_0801;Dbxref=NCBI_GP:EGL42409.1;Name=EGL42409.1;Note=identified by match to protein family HMM PF03116%3B match to protein family HMM TIGR01946;gbkey=CDS;gene=rnfD;locus_tag=HMPREF1039_0801;product=electron transport complex%2C RnfABCDGE type%2C D subunit;protein_id=EGL42409.1;transl_table=11
AFIJ01000004.1	Genbank	gene	36816	37370	.	+	.	ID=gene-HMPREF1039_0802;Name=rnfG;gbkey=Gene;gene=rnfG;gene_biotype=protein_coding;locus_tag=HMPREF1039_0802
AFIJ01000004.1	Genbank	CDS	36816	37370	.	+	0	ID=cds-EGL42363.1;Parent=gene-HMPREF1039_0802;Dbxref=NCBI_GP:EGL42363.1;Name=EGL42363.1;Note=identified by match to protein family HMM PF04205%3B match to protein family HMM TIGR01947;gbkey=CDS;gene=rnfG;locus_tag=HMPREF1039_0802;product=electron transport complex%2C RnfABCDGE type%2C G subunit;protein_id=EGL42363.1;transl_table=11
AFIJ01000004.1	Genbank	gene	37370	37993	.	+	.	ID=gene-HMPREF1039_0803;Name=rnfE;gbkey=Gene;gene=rnfE;gene_biotype=protein_coding;locus_tag=HMPREF1039_0803
AFIJ01000004.1	Genbank	CDS	37370	37993	.	+	0	ID=cds-EGL42342.1;Parent=gene-HMPREF1039_0803;Dbxref=NCBI_GP:EGL42342.1;Name=EGL42342.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01948;gbkey=CDS;gene=rnfE;locus_tag=HMPREF1039_0803;product=electron transport complex%2C RnfABCDGE type%2C E subunit;protein_id=EGL42342.1;transl_table=11
AFIJ01000004.1	Genbank	gene	37993	38568	.	+	.	ID=gene-HMPREF1039_0804;Name=rnfA;gbkey=Gene;gene=rnfA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0804
AFIJ01000004.1	Genbank	CDS	37993	38568	.	+	0	ID=cds-EGL42410.1;Parent=gene-HMPREF1039_0804;Dbxref=NCBI_GP:EGL42410.1;Name=EGL42410.1;Note=identified by match to protein family HMM PF02508%3B match to protein family HMM TIGR01943;gbkey=CDS;gene=rnfA;locus_tag=HMPREF1039_0804;product=electron transport complex%2C RnfABCDGE type%2C A subunit;protein_id=EGL42410.1;transl_table=11
AFIJ01000004.1	Genbank	gene	38593	39441	.	+	.	ID=gene-HMPREF1039_0805;Name=rnfB;gbkey=Gene;gene=rnfB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0805
AFIJ01000004.1	Genbank	CDS	38593	39441	.	+	0	ID=cds-EGL42404.1;Parent=gene-HMPREF1039_0805;Dbxref=NCBI_GP:EGL42404.1;Name=EGL42404.1;Note=identified by match to protein family HMM PF00037%3B match to protein family HMM PF04060%3B match to protein family HMM TIGR01944;gbkey=CDS;gene=rnfB;locus_tag=HMPREF1039_0805;product=electron transport complex%2C RnfABCDGE type%2C B subunit;protein_id=EGL42404.1;transl_table=11
AFIJ01000004.1	Genbank	gene	39446	40507	.	+	.	ID=gene-HMPREF1039_0806;Name=HMPREF1039_0806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0806
AFIJ01000004.1	Genbank	CDS	39446	40507	.	+	0	ID=cds-EGL42336.1;Parent=gene-HMPREF1039_0806;Dbxref=NCBI_GP:EGL42336.1;Name=EGL42336.1;Note=identified by match to protein family HMM PF02424;gbkey=CDS;locus_tag=HMPREF1039_0806;product=ApbE family protein;protein_id=EGL42336.1;transl_table=11
AFIJ01000004.1	Genbank	gene	40642	41094	.	+	.	ID=gene-HMPREF1039_0807;Name=HMPREF1039_0807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0807
AFIJ01000004.1	Genbank	CDS	40642	41094	.	+	0	ID=cds-EGL42413.1;Parent=gene-HMPREF1039_0807;Dbxref=NCBI_GP:EGL42413.1;Name=EGL42413.1;Note=identified by match to protein family HMM PF01037;gbkey=CDS;locus_tag=HMPREF1039_0807;product=transcriptional regulator%2C AsnC family;protein_id=EGL42413.1;transl_table=11
AFIJ01000004.1	Genbank	gene	41232	43133	.	+	.	ID=gene-HMPREF1039_0808;Name=HMPREF1039_0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0808
AFIJ01000004.1	Genbank	CDS	41232	43133	.	+	0	ID=cds-EGL42348.1;Parent=gene-HMPREF1039_0808;Dbxref=NCBI_GP:EGL42348.1;Name=EGL42348.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_0808;product=ABC transporter%2C ATP-binding protein;protein_id=EGL42348.1;transl_table=11
AFIJ01000004.1	Genbank	gene	43287	44696	.	+	.	ID=gene-HMPREF1039_0809;Name=HMPREF1039_0809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0809
AFIJ01000004.1	Genbank	CDS	43287	44696	.	+	0	ID=cds-EGL42385.1;Parent=gene-HMPREF1039_0809;Dbxref=NCBI_GP:EGL42385.1;Name=EGL42385.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02913;gbkey=CDS;locus_tag=HMPREF1039_0809;product=putative glycolate oxidase%2C subunit GlcD;protein_id=EGL42385.1;transl_table=11
AFIJ01000004.1	Genbank	gene	44738	44854	.	+	.	ID=gene-HMPREF1039_0810;Name=HMPREF1039_0810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0810
AFIJ01000004.1	Genbank	CDS	44738	44854	.	+	0	ID=cds-EGL42370.1;Parent=gene-HMPREF1039_0810;Dbxref=NCBI_GP:EGL42370.1;Name=EGL42370.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0810;product=hypothetical protein;protein_id=EGL42370.1;transl_table=11
AFIJ01000004.1	Genbank	gene	45016	46536	.	+	.	ID=gene-HMPREF1039_0811;Name=HMPREF1039_0811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0811
AFIJ01000004.1	Genbank	CDS	45016	46536	.	+	0	ID=cds-EGL42386.1;Parent=gene-HMPREF1039_0811;Dbxref=NCBI_GP:EGL42386.1;Name=EGL42386.1;Note=identified by match to protein family HMM PF01144;gbkey=CDS;locus_tag=HMPREF1039_0811;product=CoA transferase;protein_id=EGL42386.1;transl_table=11
AFIJ01000004.1	Genbank	gene	46553	47932	.	+	.	ID=gene-HMPREF1039_0812;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0812
AFIJ01000004.1	Genbank	CDS	46553	47932	.	+	0	ID=cds-EGL42347.1;Parent=gene-HMPREF1039_0812;Dbxref=NCBI_GP:EGL42347.1;Name=EGL42347.1;Note=identified by match to protein family HMM PF00206%3B match to protein family HMM TIGR00979;gbkey=CDS;gene=fumC;locus_tag=HMPREF1039_0812;product=fumarate hydratase%2C class II;protein_id=EGL42347.1;transl_table=11
AFIJ01000004.1	Genbank	gene	48141	48905	.	+	.	ID=gene-HMPREF1039_0813;Name=bioW;gbkey=Gene;gene=bioW;gene_biotype=protein_coding;locus_tag=HMPREF1039_0813
AFIJ01000004.1	Genbank	CDS	48141	48905	.	+	0	ID=cds-EGL42361.1;Parent=gene-HMPREF1039_0813;Dbxref=NCBI_GP:EGL42361.1;Name=EGL42361.1;Note=identified by match to protein family HMM PF03744%3B match to protein family HMM TIGR01204;gbkey=CDS;gene=bioW;locus_tag=HMPREF1039_0813;product=6-carboxyhexanoate--CoA ligase;protein_id=EGL42361.1;transl_table=11
AFIJ01000004.1	Genbank	gene	48910	50061	.	+	.	ID=gene-HMPREF1039_0814;Name=HMPREF1039_0814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0814
AFIJ01000004.1	Genbank	CDS	48910	50061	.	+	0	ID=cds-EGL42411.1;Parent=gene-HMPREF1039_0814;Dbxref=NCBI_GP:EGL42411.1;Name=EGL42411.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF1039_0814;product=putative 8-amino-7-oxononanoate synthase;protein_id=EGL42411.1;transl_table=11
AFIJ01000004.1	Genbank	gene	50049	50588	.	+	.	ID=gene-HMPREF1039_0815;Name=HMPREF1039_0815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0815
AFIJ01000004.1	Genbank	CDS	50049	50588	.	+	0	ID=cds-EGL42359.1;Parent=gene-HMPREF1039_0815;Dbxref=NCBI_GP:EGL42359.1;Name=EGL42359.1;gbkey=CDS;locus_tag=HMPREF1039_0815;product=BioX family protein;protein_id=EGL42359.1;transl_table=11
AFIJ01000004.1	Genbank	gene	50803	51288	.	+	.	ID=gene-HMPREF1039_0816;Name=HMPREF1039_0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0816
AFIJ01000004.1	Genbank	CDS	50803	51288	.	+	0	ID=cds-EGL42403.1;Parent=gene-HMPREF1039_0816;Dbxref=NCBI_GP:EGL42403.1;Name=EGL42403.1;Note=identified by match to protein family HMM PF00588;gbkey=CDS;locus_tag=HMPREF1039_0816;product=putative RNA methyltransferase%2C TrmH family%2C group 2;protein_id=EGL42403.1;transl_table=11
AFIJ01000004.1	Genbank	gene	51304	51651	.	+	.	ID=gene-HMPREF1039_0817;Name=HMPREF1039_0817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0817
AFIJ01000004.1	Genbank	CDS	51304	51651	.	+	0	ID=cds-EGL42387.1;Parent=gene-HMPREF1039_0817;Dbxref=NCBI_GP:EGL42387.1;Name=EGL42387.1;gbkey=CDS;locus_tag=HMPREF1039_0817;product=hypothetical protein;protein_id=EGL42387.1;transl_table=11
AFIJ01000004.1	Genbank	gene	51641	52564	.	+	.	ID=gene-HMPREF1039_0818;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0818
AFIJ01000004.1	Genbank	CDS	51641	52564	.	+	0	ID=cds-EGL42382.1;Parent=gene-HMPREF1039_0818;Dbxref=NCBI_GP:EGL42382.1;Name=EGL42382.1;Note=identified by match to protein family HMM PF01565%3B match to protein family HMM PF02873%3B match to protein family HMM TIGR00179;gbkey=CDS;gene=murB;locus_tag=HMPREF1039_0818;product=UDP-N-acetylmuramate dehydrogenase;protein_id=EGL42382.1;transl_table=11
AFIJ01000004.1	Genbank	gene	52715	54520	.	+	.	ID=gene-HMPREF1039_0819;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0819
AFIJ01000004.1	Genbank	CDS	52715	54520	.	+	0	ID=cds-EGL42406.1;Parent=gene-HMPREF1039_0819;Dbxref=NCBI_GP:EGL42406.1;Name=EGL42406.1;Note=identified by match to protein family HMM PF00009%3B match to protein family HMM PF00679%3B match to protein family HMM PF01926%3B match to protein family HMM PF03144%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR01394;gbkey=CDS;gene=typA;locus_tag=HMPREF1039_0819;product=GTP-binding protein TypA;protein_id=EGL42406.1;transl_table=11
AFIJ01000004.1	Genbank	gene	54907	55350	.	-	.	ID=gene-HMPREF1039_0820;Name=HMPREF1039_0820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0820
AFIJ01000004.1	Genbank	CDS	54907	55350	.	-	0	ID=cds-EGL42392.1;Parent=gene-HMPREF1039_0820;Dbxref=NCBI_GP:EGL42392.1;Name=EGL42392.1;gbkey=CDS;locus_tag=HMPREF1039_0820;product=hypothetical protein;protein_id=EGL42392.1;transl_table=11
AFIJ01000004.1	Genbank	gene	55351	56772	.	+	.	ID=gene-HMPREF1039_0821;Name=HMPREF1039_0821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0821
AFIJ01000004.1	Genbank	CDS	55351	56772	.	+	0	ID=cds-EGL42365.1;Parent=gene-HMPREF1039_0821;Dbxref=NCBI_GP:EGL42365.1;Name=EGL42365.1;Note=identified by match to protein family HMM PF00395;gbkey=CDS;locus_tag=HMPREF1039_0821;product=hypothetical protein;protein_id=EGL42365.1;transl_table=11
AFIJ01000004.1	Genbank	gene	57098	57979	.	+	.	ID=gene-HMPREF1039_0822;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=HMPREF1039_0822
AFIJ01000004.1	Genbank	CDS	57098	57979	.	+	0	ID=cds-EGL42329.1;Parent=gene-HMPREF1039_0822;Dbxref=NCBI_GP:EGL42329.1;Name=EGL42329.1;Note=identified by match to protein family HMM PF02091%3B match to protein family HMM TIGR00388;gbkey=CDS;gene=glyQ;locus_tag=HMPREF1039_0822;product=glycine--tRNA ligase%2C alpha subunit;protein_id=EGL42329.1;transl_table=11
AFIJ01000004.1	Genbank	gene	57976	60030	.	+	.	ID=gene-HMPREF1039_0823;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=HMPREF1039_0823
AFIJ01000004.1	Genbank	CDS	57976	60030	.	+	0	ID=cds-EGL42396.1;Parent=gene-HMPREF1039_0823;Dbxref=NCBI_GP:EGL42396.1;Name=EGL42396.1;Note=identified by match to protein family HMM PF02092%3B match to protein family HMM PF05746%3B match to protein family HMM TIGR00211;gbkey=CDS;gene=glyS;locus_tag=HMPREF1039_0823;product=glycine--tRNA ligase%2C beta subunit;protein_id=EGL42396.1;transl_table=11
AFIJ01000004.1	Genbank	gene	60325	61524	.	+	.	ID=gene-HMPREF1039_0824;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=HMPREF1039_0824
AFIJ01000004.1	Genbank	CDS	60325	61524	.	+	0	ID=cds-EGL42354.1;Parent=gene-HMPREF1039_0824;Dbxref=NCBI_GP:EGL42354.1;Name=EGL42354.1;Note=identified by match to protein family HMM PF00842%3B match to protein family HMM PF01168%3B match to protein family HMM TIGR00492;gbkey=CDS;gene=alr;locus_tag=HMPREF1039_0824;product=alanine racemase;protein_id=EGL42354.1;transl_table=11
AFIJ01000004.1	Genbank	gene	61789	62967	.	+	.	ID=gene-HMPREF1039_0825;Name=HMPREF1039_0825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0825
AFIJ01000004.1	Genbank	CDS	61789	62967	.	+	0	ID=cds-EGL42408.1;Parent=gene-HMPREF1039_0825;Dbxref=NCBI_GP:EGL42408.1;Name=EGL42408.1;Note=identified by match to protein family HMM PF00155%3B match to protein family HMM PF00266%3B match to protein family HMM PF01212;gbkey=CDS;locus_tag=HMPREF1039_0825;product=aminotransferase%2C class I/II;protein_id=EGL42408.1;transl_table=11
AFIJ01000004.1	Genbank	gene	62969	63130	.	+	.	ID=gene-HMPREF1039_0826;Name=HMPREF1039_0826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0826
AFIJ01000004.1	Genbank	CDS	62969	63130	.	+	0	ID=cds-EGL42371.1;Parent=gene-HMPREF1039_0826;Dbxref=NCBI_GP:EGL42371.1;Name=EGL42371.1;gbkey=CDS;locus_tag=HMPREF1039_0826;product=hypothetical protein;protein_id=EGL42371.1;transl_table=11
AFIJ01000004.1	Genbank	gene	63154	63339	.	-	.	ID=gene-HMPREF1039_0827;Name=HMPREF1039_0827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0827
AFIJ01000004.1	Genbank	CDS	63154	63339	.	-	0	ID=cds-EGL42372.1;Parent=gene-HMPREF1039_0827;Dbxref=NCBI_GP:EGL42372.1;Name=EGL42372.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0827;product=hypothetical protein;protein_id=EGL42372.1;transl_table=11
AFIJ01000004.1	Genbank	gene	63515	63916	.	+	.	ID=gene-HMPREF1039_0828;Name=HMPREF1039_0828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0828
AFIJ01000004.1	Genbank	CDS	63515	63916	.	+	0	ID=cds-EGL42355.1;Parent=gene-HMPREF1039_0828;Dbxref=NCBI_GP:EGL42355.1;Name=EGL42355.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;locus_tag=HMPREF1039_0828;product=hypothetical protein;protein_id=EGL42355.1;transl_table=11
AFIJ01000004.1	Genbank	gene	63932	64354	.	+	.	ID=gene-HMPREF1039_0829;Name=HMPREF1039_0829;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0829
AFIJ01000004.1	Genbank	CDS	63932	64354	.	+	0	ID=cds-EGL42357.1;Parent=gene-HMPREF1039_0829;Dbxref=NCBI_GP:EGL42357.1;Name=EGL42357.1;Note=identified by match to protein family HMM PF05656;gbkey=CDS;locus_tag=HMPREF1039_0829;product=hypothetical protein;protein_id=EGL42357.1;transl_table=11
AFIJ01000004.1	Genbank	gene	64431	64619	.	-	.	ID=gene-HMPREF1039_0830;Name=HMPREF1039_0830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0830
AFIJ01000004.1	Genbank	CDS	64431	64619	.	-	0	ID=cds-EGL42352.1;Parent=gene-HMPREF1039_0830;Dbxref=NCBI_GP:EGL42352.1;Name=EGL42352.1;gbkey=CDS;locus_tag=HMPREF1039_0830;product=hypothetical protein;protein_id=EGL42352.1;transl_table=11
AFIJ01000004.1	Genbank	gene	64595	64774	.	-	.	ID=gene-HMPREF1039_0831;Name=HMPREF1039_0831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0831
AFIJ01000004.1	Genbank	CDS	64595	64774	.	-	0	ID=cds-EGL42338.1;Parent=gene-HMPREF1039_0831;Dbxref=NCBI_GP:EGL42338.1;Name=EGL42338.1;gbkey=CDS;locus_tag=HMPREF1039_0831;product=hypothetical protein;protein_id=EGL42338.1;transl_table=11
AFIJ01000004.1	Genbank	gene	64847	65407	.	-	.	ID=gene-HMPREF1039_0832;Name=HMPREF1039_0832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0832
AFIJ01000004.1	Genbank	CDS	64847	65407	.	-	0	ID=cds-EGL42369.1;Parent=gene-HMPREF1039_0832;Dbxref=NCBI_GP:EGL42369.1;Name=EGL42369.1;Note=identified by match to protein family HMM PF00165%3B match to protein family HMM PF02805;gbkey=CDS;locus_tag=HMPREF1039_0832;product=transcriptional regulator%2C AraC family;protein_id=EGL42369.1;transl_table=11
AFIJ01000004.1	Genbank	gene	65689	65892	.	+	.	ID=gene-HMPREF1039_0833;Name=HMPREF1039_0833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0833
AFIJ01000004.1	Genbank	CDS	65689	65892	.	+	0	ID=cds-EGL42384.1;Parent=gene-HMPREF1039_0833;Dbxref=NCBI_GP:EGL42384.1;Name=EGL42384.1;Note=identified by match to protein family HMM PF04023;gbkey=CDS;locus_tag=HMPREF1039_0833;product=FeoA domain protein;protein_id=EGL42384.1;transl_table=11
AFIJ01000004.1	Genbank	gene	65910	66131	.	+	.	ID=gene-HMPREF1039_0834;Name=HMPREF1039_0834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0834
AFIJ01000004.1	Genbank	CDS	65910	66131	.	+	0	ID=cds-EGL42379.1;Parent=gene-HMPREF1039_0834;Dbxref=NCBI_GP:EGL42379.1;Name=EGL42379.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF04023;gbkey=CDS;locus_tag=HMPREF1039_0834;product=FeoA domain protein;protein_id=EGL42379.1;transl_table=11
AFIJ01000004.1	Genbank	gene	66148	68331	.	+	.	ID=gene-HMPREF1039_0835;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0835
AFIJ01000004.1	Genbank	CDS	66148	68331	.	+	0	ID=cds-EGL42344.1;Parent=gene-HMPREF1039_0835;Dbxref=NCBI_GP:EGL42344.1;Name=EGL42344.1;Note=identified by match to protein family HMM PF01926%3B match to protein family HMM PF02421%3B match to protein family HMM PF07664%3B match to protein family HMM PF07670%3B match to protein family HMM TIGR00231%3B match to protein family HMM TIGR00437;gbkey=CDS;gene=feoB;locus_tag=HMPREF1039_0835;product=ferrous iron transport protein B;protein_id=EGL42344.1;transl_table=11
AFIJ01000004.1	Genbank	gene	68359	68487	.	+	.	ID=gene-HMPREF1039_0836;Name=HMPREF1039_0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0836
AFIJ01000004.1	Genbank	CDS	68359	68487	.	+	0	ID=cds-EGL42335.1;Parent=gene-HMPREF1039_0836;Dbxref=NCBI_GP:EGL42335.1;Name=EGL42335.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0836;product=hypothetical protein;protein_id=EGL42335.1;transl_table=11
AFIJ01000004.1	Genbank	gene	68646	69920	.	+	.	ID=gene-HMPREF1039_0837;Name=ppaC;gbkey=Gene;gene=ppaC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0837
AFIJ01000004.1	Genbank	CDS	68646	69920	.	+	0	ID=cds-EGL42398.1;Parent=gene-HMPREF1039_0837;Dbxref=NCBI_GP:EGL42398.1;Name=EGL42398.1;Note=identified by match to protein family HMM PF01368%3B match to protein family HMM PF02833;gbkey=CDS;gene=ppaC;locus_tag=HMPREF1039_0837;product=DHHA2 domain protein;protein_id=EGL42398.1;transl_table=11
AFIJ01000004.1	Genbank	gene	69981	72197	.	+	.	ID=gene-HMPREF1039_0838;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0838
AFIJ01000004.1	Genbank	CDS	69981	72197	.	+	0	ID=cds-EGL42383.1;Parent=gene-HMPREF1039_0838;Dbxref=NCBI_GP:EGL42383.1;Name=EGL42383.1;Note=identified by match to protein family HMM PF00580%3B match to protein family HMM TIGR01073;gbkey=CDS;gene=pcrA;locus_tag=HMPREF1039_0838;product=ATP-dependent DNA helicase PcrA;protein_id=EGL42383.1;transl_table=11
AFIJ01000004.1	Genbank	gene	72217	74223	.	+	.	ID=gene-HMPREF1039_0839;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0839
AFIJ01000004.1	Genbank	CDS	72217	74223	.	+	0	ID=cds-EGL42356.1;Parent=gene-HMPREF1039_0839;Dbxref=NCBI_GP:EGL42356.1;Name=EGL42356.1;Note=identified by match to protein family HMM PF00533%3B match to protein family HMM PF01653%3B match to protein family HMM PF03119%3B match to protein family HMM PF03120%3B match to protein family HMM TIGR00575;gbkey=CDS;gene=ligA;locus_tag=HMPREF1039_0839;product=DNA ligase (NAD+);protein_id=EGL42356.1;transl_table=11
AFIJ01000004.1	Genbank	gene	74294	74584	.	+	.	ID=gene-HMPREF1039_0840;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0840
AFIJ01000004.1	Genbank	CDS	74294	74584	.	+	0	ID=cds-EGL42328.1;Parent=gene-HMPREF1039_0840;Dbxref=NCBI_GP:EGL42328.1;Name=EGL42328.1;Note=identified by match to protein family HMM PF02686%3B match to protein family HMM TIGR00135;gbkey=CDS;gene=gatC;locus_tag=HMPREF1039_0840;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C C subunit;protein_id=EGL42328.1;transl_table=11
AFIJ01000004.1	Genbank	gene	74596	76062	.	+	.	ID=gene-HMPREF1039_0841;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0841
AFIJ01000004.1	Genbank	CDS	74596	76062	.	+	0	ID=cds-EGL42397.1;Parent=gene-HMPREF1039_0841;Dbxref=NCBI_GP:EGL42397.1;Name=EGL42397.1;Note=identified by match to protein family HMM PF01425%3B match to protein family HMM TIGR00132;gbkey=CDS;gene=gatA;locus_tag=HMPREF1039_0841;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C A subunit;protein_id=EGL42397.1;transl_table=11
AFIJ01000004.1	Genbank	gene	76059	77501	.	+	.	ID=gene-HMPREF1039_0842;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0842
AFIJ01000004.1	Genbank	CDS	76059	77501	.	+	0	ID=cds-EGL42332.1;Parent=gene-HMPREF1039_0842;Dbxref=NCBI_GP:EGL42332.1;Name=EGL42332.1;Note=identified by match to protein family HMM PF01162%3B match to protein family HMM PF02637%3B match to protein family HMM PF02934%3B match to protein family HMM TIGR00133;gbkey=CDS;gene=gatB;locus_tag=HMPREF1039_0842;product=aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase%2C B subunit;protein_id=EGL42332.1;transl_table=11
AFIJ01000004.1	Genbank	gene	77705	79162	.	+	.	ID=gene-HMPREF1039_0843;Name=HMPREF1039_0843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0843
AFIJ01000004.1	Genbank	CDS	77705	79162	.	+	0	ID=cds-EGL42334.1;Parent=gene-HMPREF1039_0843;Dbxref=NCBI_GP:EGL42334.1;Name=EGL42334.1;Note=identified by match to protein family HMM PF00939%3B match to protein family HMM TIGR00785;gbkey=CDS;locus_tag=HMPREF1039_0843;product=transporter%2C DASS family;protein_id=EGL42334.1;transl_table=11
AFIJ01000004.1	Genbank	gene	79181	79753	.	+	.	ID=gene-HMPREF1039_0844;Name=HMPREF1039_0844;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0844
AFIJ01000004.1	Genbank	CDS	79181	79753	.	+	0	ID=cds-EGL42393.1;Parent=gene-HMPREF1039_0844;Dbxref=NCBI_GP:EGL42393.1;Name=EGL42393.1;gbkey=CDS;locus_tag=HMPREF1039_0844;product=bacterial transferase hexapeptide repeat protein;protein_id=EGL42393.1;transl_table=11
AFIJ01000004.1	Genbank	gene	79770	79976	.	+	.	ID=gene-HMPREF1039_0845;Name=HMPREF1039_0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0845
AFIJ01000004.1	Genbank	CDS	79770	79976	.	+	0	ID=cds-EGL42373.1;Parent=gene-HMPREF1039_0845;Dbxref=NCBI_GP:EGL42373.1;Name=EGL42373.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift;gbkey=CDS;locus_tag=HMPREF1039_0845;product=hypothetical protein;protein_id=EGL42373.1;transl_table=11
AFIJ01000004.1	Genbank	gene	79997	81268	.	+	.	ID=gene-HMPREF1039_0846;Name=HMPREF1039_0846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0846
AFIJ01000004.1	Genbank	CDS	79997	81268	.	+	0	ID=cds-EGL42414.1;Parent=gene-HMPREF1039_0846;Dbxref=NCBI_GP:EGL42414.1;Name=EGL42414.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a frame shift%3B identified by match to protein family HMM PF02550;gbkey=CDS;locus_tag=HMPREF1039_0846;product=succinate CoA transferase;protein_id=EGL42414.1;transl_table=11
AFIJ01000004.1	Genbank	gene	81690	82367	.	+	.	ID=gene-HMPREF1039_0847;Name=HMPREF1039_0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0847
AFIJ01000004.1	Genbank	CDS	81690	82367	.	+	0	ID=cds-EGL42341.1;Parent=gene-HMPREF1039_0847;Dbxref=NCBI_GP:EGL42341.1;Name=EGL42341.1;Note=identified by match to protein family HMM PF00027;gbkey=CDS;locus_tag=HMPREF1039_0847;product=cyclic nucleotide-binding domain protein;protein_id=EGL42341.1;transl_table=11
AFIJ01000004.1	Genbank	gene	82874	87688	.	+	.	ID=gene-HMPREF1039_0848;Name=HMPREF1039_0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0848
AFIJ01000004.1	Genbank	CDS	82874	87688	.	+	0	ID=cds-EGL42399.1;Parent=gene-HMPREF1039_0848;Dbxref=NCBI_GP:EGL42399.1;Name=EGL42399.1;Note=identified by match to protein family HMM PF00593%3B match to protein family HMM PF07715;gbkey=CDS;locus_tag=HMPREF1039_0848;product=TonB-dependent receptor plug domain protein;protein_id=EGL42399.1;transl_table=11
AFIJ01000004.1	Genbank	gene	87860	90001	.	+	.	ID=gene-HMPREF1039_0849;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=HMPREF1039_0849
AFIJ01000004.1	Genbank	CDS	87860	90001	.	+	0	ID=cds-EGL42366.1;Parent=gene-HMPREF1039_0849;Dbxref=NCBI_GP:EGL42366.1;Name=EGL42366.1;Note=identified by match to protein family HMM PF00271%3B match to protein family HMM PF02151%3B match to protein family HMM PF04851%3B match to protein family HMM TIGR00631;gbkey=CDS;gene=uvrB;locus_tag=HMPREF1039_0849;product=excinuclease ABC%2C B subunit;protein_id=EGL42366.1;transl_table=11
AFIJ01000004.1	Genbank	gene	90007	92871	.	+	.	ID=gene-HMPREF1039_0850;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=HMPREF1039_0850
AFIJ01000004.1	Genbank	CDS	90007	92871	.	+	0	ID=cds-EGL42326.1;Parent=gene-HMPREF1039_0850;Dbxref=NCBI_GP:EGL42326.1;Name=EGL42326.1;Note=identified by match to protein family HMM PF00005%3B match to protein family HMM TIGR00630;gbkey=CDS;gene=uvrA;locus_tag=HMPREF1039_0850;product=excinuclease ABC%2C A subunit;protein_id=EGL42326.1;transl_table=11
AFIJ01000004.1	Genbank	gene	92861	94699	.	+	.	ID=gene-HMPREF1039_0851;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF1039_0851
AFIJ01000004.1	Genbank	CDS	92861	94699	.	+	0	ID=cds-EGL42412.1;Parent=gene-HMPREF1039_0851;Dbxref=NCBI_GP:EGL42412.1;Name=EGL42412.1;Note=identified by match to protein family HMM PF01541%3B match to protein family HMM PF02151%3B match to protein family HMM PF08459%3B match to protein family HMM TIGR00194;gbkey=CDS;gene=uvrC;locus_tag=HMPREF1039_0851;product=excinuclease ABC%2C C subunit;protein_id=EGL42412.1;transl_table=11
AFIJ01000004.1	Genbank	gene	94768	95403	.	+	.	ID=gene-HMPREF1039_0852;Name=HMPREF1039_0852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0852
AFIJ01000004.1	Genbank	CDS	94768	95403	.	+	0	ID=cds-EGL42358.1;Parent=gene-HMPREF1039_0852;Dbxref=NCBI_GP:EGL42358.1;Name=EGL42358.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_0852;product=hypothetical protein;protein_id=EGL42358.1;transl_table=11
AFIJ01000004.1	Genbank	gene	95757	95918	.	+	.	ID=gene-HMPREF1039_0853;Name=HMPREF1039_0853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0853
AFIJ01000004.1	Genbank	CDS	95757	95918	.	+	0	ID=cds-EGL42353.1;Parent=gene-HMPREF1039_0853;Dbxref=NCBI_GP:EGL42353.1;Name=EGL42353.1;Note=identified by match to protein family HMM PF00301;gbkey=CDS;locus_tag=HMPREF1039_0853;product=rubredoxin;protein_id=EGL42353.1;transl_table=11
AFIJ01000004.1	Genbank	gene	96186	97379	.	+	.	ID=gene-HMPREF1039_0854;Name=HMPREF1039_0854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0854
AFIJ01000004.1	Genbank	CDS	96186	97379	.	+	0	ID=cds-EGL42351.1;Parent=gene-HMPREF1039_0854;Dbxref=NCBI_GP:EGL42351.1;Name=EGL42351.1;Note=identified by match to protein family HMM PF00155;gbkey=CDS;locus_tag=HMPREF1039_0854;product=aminotransferase%2C class I/II;protein_id=EGL42351.1;transl_table=11
AFIJ01000004.1	Genbank	gene	98013	98462	.	+	.	ID=gene-HMPREF1039_0855;Name=HMPREF1039_0855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0855
AFIJ01000004.1	Genbank	CDS	98013	98462	.	+	0	ID=cds-EGL42346.1;Parent=gene-HMPREF1039_0855;Dbxref=NCBI_GP:EGL42346.1;Name=EGL42346.1;Note=an automated process has identified a potential problem with this gene model%3B the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model%3B the current gene model (or a revised gene model) may contain a premature stop;gbkey=CDS;locus_tag=HMPREF1039_0855;product=hypothetical protein;protein_id=EGL42346.1;transl_table=11
AFIJ01000004.1	Genbank	gene	98575	100595	.	+	.	ID=gene-HMPREF1039_0856;Name=HMPREF1039_0856;end_range=100595,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_0856;partial=true
AFIJ01000004.1	Genbank	CDS	98575	100595	.	+	0	ID=cds-EGL42389.1;Parent=gene-HMPREF1039_0856;Dbxref=NCBI_GP:EGL42389.1;Name=EGL42389.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error%3B identified by match to protein family HMM PF01391%3B match to protein family HMM PF05658%3B match to protein family HMM PF05662;end_range=100595,.;gbkey=CDS;locus_tag=HMPREF1039_0856;partial=true;product=Hep/Hag repeat protein;protein_id=EGL42389.1;transl_table=11
##sequence-region AFIJ01000003.1 1 19318
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000003.1	Genbank	region	1	19318	.	+	.	ID=AFIJ01000003.1:1..19318;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000003.1	Genbank	gene	38	562	.	+	.	ID=gene-HMPREF1039_1540;Name=HMPREF1039_1540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1540
AFIJ01000003.1	Genbank	CDS	38	562	.	+	0	ID=cds-EGL42467.1;Parent=gene-HMPREF1039_1540;Dbxref=NCBI_GP:EGL42467.1;Name=EGL42467.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;gbkey=CDS;locus_tag=HMPREF1039_1540;product=hypothetical protein;protein_id=EGL42467.1;transl_table=11
AFIJ01000003.1	Genbank	gene	1116	5402	.	+	.	ID=gene-HMPREF1039_1541;Name=HMPREF1039_1541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1541
AFIJ01000003.1	Genbank	CDS	1116	5402	.	+	0	ID=cds-EGL42469.1;Parent=gene-HMPREF1039_1541;Dbxref=NCBI_GP:EGL42469.1;Name=EGL42469.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1541;product=hypothetical protein;protein_id=EGL42469.1;transl_table=11
AFIJ01000003.1	Genbank	gene	5472	6329	.	-	.	ID=gene-HMPREF1039_1542;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=HMPREF1039_1542
AFIJ01000003.1	Genbank	CDS	5472	6329	.	-	0	ID=cds-EGL42468.1;Parent=gene-HMPREF1039_1542;Dbxref=NCBI_GP:EGL42468.1;Name=EGL42468.1;Note=identified by match to protein family HMM PF02219%3B match to protein family HMM TIGR00676;gbkey=CDS;gene=metF;locus_tag=HMPREF1039_1542;product=methylenetetrahydrofolate reductase (NAD(P)H);protein_id=EGL42468.1;transl_table=11
AFIJ01000003.1	Genbank	gene	6425	7249	.	-	.	ID=gene-HMPREF1039_1543;Name=HMPREF1039_1543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1543
AFIJ01000003.1	Genbank	CDS	6425	7249	.	-	0	ID=cds-EGL42461.1;Parent=gene-HMPREF1039_1543;Dbxref=NCBI_GP:EGL42461.1;Name=EGL42461.1;Note=identified by match to protein family HMM PF03180%3B match to protein family HMM TIGR00363;gbkey=CDS;locus_tag=HMPREF1039_1543;product=lipoprotein%2C YaeC family;protein_id=EGL42461.1;transl_table=11
AFIJ01000003.1	Genbank	binding_site	7338	7433	.	-	.	ID=id-AFIJ01000003.1:7338..7433;Note=SAM riboswitch (S box leader)%3B Rfam score 75.92;bound_moiety=S-adenosyl methionine;gbkey=misc_binding;inference=nucleotide motif:RFAM:RF00162
AFIJ01000003.1	Genbank	sequence_feature	7598	7849	.	+	.	ID=id-AFIJ01000003.1:7598..7849;Note=T-box leader;gbkey=misc_feature
AFIJ01000003.1	Genbank	gene	7894	8709	.	+	.	ID=gene-HMPREF1039_1546;Name=HMPREF1039_1546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1546
AFIJ01000003.1	Genbank	CDS	7894	8709	.	+	0	ID=cds-EGL42460.1;Parent=gene-HMPREF1039_1546;Dbxref=NCBI_GP:EGL42460.1;Name=EGL42460.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_1546;product=ABC transporter%2C ATP-binding protein;protein_id=EGL42460.1;transl_table=11
AFIJ01000003.1	Genbank	gene	8706	9389	.	+	.	ID=gene-HMPREF1039_1547;Name=HMPREF1039_1547;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1547
AFIJ01000003.1	Genbank	CDS	8706	9389	.	+	0	ID=cds-EGL42474.1;Parent=gene-HMPREF1039_1547;Dbxref=NCBI_GP:EGL42474.1;Name=EGL42474.1;Note=identified by match to protein family HMM PF02361;gbkey=CDS;locus_tag=HMPREF1039_1547;product=cobalt transport protein;protein_id=EGL42474.1;transl_table=11
AFIJ01000003.1	Genbank	gene	9402	10877	.	+	.	ID=gene-HMPREF1039_1548;Name=HMPREF1039_1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1548
AFIJ01000003.1	Genbank	CDS	9402	10877	.	+	0	ID=cds-EGL42466.1;Parent=gene-HMPREF1039_1548;Dbxref=NCBI_GP:EGL42466.1;Name=EGL42466.1;Note=identified by match to protein family HMM PF00005;gbkey=CDS;locus_tag=HMPREF1039_1548;product=ABC transporter%2C ATP-binding protein;protein_id=EGL42466.1;transl_table=11
AFIJ01000003.1	Genbank	gene	11144	11875	.	-	.	ID=gene-HMPREF1039_1549;Name=HMPREF1039_1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1549
AFIJ01000003.1	Genbank	CDS	11144	11875	.	-	0	ID=cds-EGL42470.1;Parent=gene-HMPREF1039_1549;Dbxref=NCBI_GP:EGL42470.1;Name=EGL42470.1;Note=identified by match to protein family HMM PF01063;gbkey=CDS;locus_tag=HMPREF1039_1549;product=aminotransferase%2C class IV;protein_id=EGL42470.1;transl_table=11
AFIJ01000003.1	Genbank	gene	11859	13241	.	-	.	ID=gene-HMPREF1039_1550;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=HMPREF1039_1550
AFIJ01000003.1	Genbank	CDS	11859	13241	.	-	0	ID=cds-EGL42473.1;Parent=gene-HMPREF1039_1550;Dbxref=NCBI_GP:EGL42473.1;Name=EGL42473.1;Note=identified by match to protein family HMM PF00425%3B match to protein family HMM PF04715%3B match to protein family HMM TIGR00553;gbkey=CDS;gene=pabB;locus_tag=HMPREF1039_1550;product=aminodeoxychorismate synthase%2C component I;protein_id=EGL42473.1;transl_table=11
AFIJ01000003.1	Genbank	gene	13238	13840	.	-	.	ID=gene-HMPREF1039_1551;Name=HMPREF1039_1551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1551
AFIJ01000003.1	Genbank	CDS	13238	13840	.	-	0	ID=cds-EGL42464.1;Parent=gene-HMPREF1039_1551;Dbxref=NCBI_GP:EGL42464.1;Name=EGL42464.1;Note=identified by match to protein family HMM PF00117%3B match to protein family HMM TIGR00566;gbkey=CDS;locus_tag=HMPREF1039_1551;product=glutamine amidotransferase%2C class I;protein_id=EGL42464.1;transl_table=11
AFIJ01000003.1	Genbank	gene	14061	14330	.	+	.	ID=gene-HMPREF1039_1552;Name=HMPREF1039_1552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1552
AFIJ01000003.1	Genbank	CDS	14061	14330	.	+	0	ID=cds-EGL42459.1;Parent=gene-HMPREF1039_1552;Dbxref=NCBI_GP:EGL42459.1;Name=EGL42459.1;gbkey=CDS;locus_tag=HMPREF1039_1552;product=hypothetical protein;protein_id=EGL42459.1;transl_table=11
AFIJ01000003.1	Genbank	gene	14449	14522	.	+	.	ID=gene-HMPREF1039_1553;Name=HMPREF1039_1553;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1553
AFIJ01000003.1	Genbank	tRNA	14449	14522	.	+	.	ID=rna-HMPREF1039_1553;Parent=gene-HMPREF1039_1553;gbkey=tRNA;locus_tag=HMPREF1039_1553;product=tRNA-Gly
AFIJ01000003.1	Genbank	exon	14449	14522	.	+	.	ID=exon-HMPREF1039_1553-1;Parent=rna-HMPREF1039_1553;gbkey=tRNA;locus_tag=HMPREF1039_1553;product=tRNA-Gly
AFIJ01000003.1	Genbank	gene	14646	15812	.	+	.	ID=gene-HMPREF1039_1554;Name=HMPREF1039_1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1554
AFIJ01000003.1	Genbank	CDS	14646	15812	.	+	0	ID=cds-EGL42472.1;Parent=gene-HMPREF1039_1554;Dbxref=NCBI_GP:EGL42472.1;Name=EGL42472.1;Note=identified by match to protein family HMM PF00465;gbkey=CDS;locus_tag=HMPREF1039_1554;product=alcohol dehydrogenase%2C iron-dependent;protein_id=EGL42472.1;transl_table=11
AFIJ01000003.1	Genbank	gene	15869	16441	.	-	.	ID=gene-HMPREF1039_1555;Name=HMPREF1039_1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1555
AFIJ01000003.1	Genbank	CDS	15869	16441	.	-	0	ID=cds-EGL42471.1;Parent=gene-HMPREF1039_1555;Dbxref=NCBI_GP:EGL42471.1;Name=EGL42471.1;Note=identified by match to protein family HMM PF04073%3B match to protein family HMM TIGR00011;gbkey=CDS;locus_tag=HMPREF1039_1555;product=YbaK/EbsC protein;protein_id=EGL42471.1;transl_table=11
AFIJ01000003.1	Genbank	gene	16513	17298	.	+	.	ID=gene-HMPREF1039_1556;Name=HMPREF1039_1556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1556
AFIJ01000003.1	Genbank	CDS	16513	17298	.	+	0	ID=cds-EGL42463.1;Parent=gene-HMPREF1039_1556;Dbxref=NCBI_GP:EGL42463.1;Name=EGL42463.1;Note=identified by match to protein family HMM PF00795;gbkey=CDS;locus_tag=HMPREF1039_1556;product=hydrolase%2C carbon-nitrogen family;protein_id=EGL42463.1;transl_table=11
AFIJ01000003.1	Genbank	gene	17380	18729	.	-	.	ID=gene-HMPREF1039_1557;Name=gdh;gbkey=Gene;gene=gdh;gene_biotype=protein_coding;locus_tag=HMPREF1039_1557
AFIJ01000003.1	Genbank	CDS	17380	18729	.	-	0	ID=cds-EGL42465.1;Parent=gene-HMPREF1039_1557;Dbxref=NCBI_GP:EGL42465.1;Name=EGL42465.1;Note=identified by match to protein family HMM PF00208%3B match to protein family HMM PF02812;gbkey=CDS;gene=gdh;locus_tag=HMPREF1039_1557;product=Glu/Leu/Phe/Val dehydrogenase%2C dimerization domain protein;protein_id=EGL42465.1;transl_table=11
AFIJ01000003.1	Genbank	gene	19068	19143	.	+	.	ID=gene-HMPREF1039_1558;Name=HMPREF1039_1558;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1558
AFIJ01000003.1	Genbank	tRNA	19068	19143	.	+	.	ID=rna-HMPREF1039_1558;Parent=gene-HMPREF1039_1558;gbkey=tRNA;locus_tag=HMPREF1039_1558;product=tRNA-Ala
AFIJ01000003.1	Genbank	exon	19068	19143	.	+	.	ID=exon-HMPREF1039_1558-1;Parent=rna-HMPREF1039_1558;gbkey=tRNA;locus_tag=HMPREF1039_1558;product=tRNA-Ala
AFIJ01000003.1	Genbank	gene	19161	19283	.	+	.	ID=gene-HMPREF1039_1559;Name=HMPREF1039_1559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1559
AFIJ01000003.1	Genbank	CDS	19161	19283	.	+	0	ID=cds-EGL42462.1;Parent=gene-HMPREF1039_1559;Dbxref=NCBI_GP:EGL42462.1;Name=EGL42462.1;Note=identified by glimmer%3B putative;gbkey=CDS;locus_tag=HMPREF1039_1559;product=hypothetical protein;protein_id=EGL42462.1;transl_table=11
##sequence-region AFIJ01000002.1 1 1880
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000002.1	Genbank	region	1	1880	.	+	.	ID=AFIJ01000002.1:1..1880;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000002.1	Genbank	gene	315	1004	.	-	.	ID=gene-HMPREF1039_1619;Name=HMPREF1039_1619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1619
AFIJ01000002.1	Genbank	CDS	315	1004	.	-	0	ID=cds-EGL42573.1;Parent=gene-HMPREF1039_1619;Dbxref=NCBI_GP:EGL42573.1;Name=EGL42573.1;Note=identified by match to protein family HMM PF00072%3B match to protein family HMM PF00486;gbkey=CDS;locus_tag=HMPREF1039_1619;product=response regulator receiver domain protein;protein_id=EGL42573.1;transl_table=11
AFIJ01000002.1	Genbank	gene	1594	1669	.	+	.	ID=gene-HMPREF1039_1620;Name=HMPREF1039_1620;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1620
AFIJ01000002.1	Genbank	tRNA	1594	1669	.	+	.	ID=rna-HMPREF1039_1620;Parent=gene-HMPREF1039_1620;gbkey=tRNA;locus_tag=HMPREF1039_1620;product=tRNA-Asn
AFIJ01000002.1	Genbank	exon	1594	1669	.	+	.	ID=exon-HMPREF1039_1620-1;Parent=rna-HMPREF1039_1620;gbkey=tRNA;locus_tag=HMPREF1039_1620;product=tRNA-Asn
AFIJ01000002.1	Genbank	gene	1671	1746	.	+	.	ID=gene-HMPREF1039_1621;Name=HMPREF1039_1621;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1621
AFIJ01000002.1	Genbank	tRNA	1671	1746	.	+	.	ID=rna-HMPREF1039_1621;Parent=gene-HMPREF1039_1621;gbkey=tRNA;locus_tag=HMPREF1039_1621;product=tRNA-Glu
AFIJ01000002.1	Genbank	exon	1671	1746	.	+	.	ID=exon-HMPREF1039_1621-1;Parent=rna-HMPREF1039_1621;gbkey=tRNA;locus_tag=HMPREF1039_1621;product=tRNA-Glu
AFIJ01000002.1	Genbank	gene	1751	1826	.	+	.	ID=gene-HMPREF1039_1622;Name=HMPREF1039_1622;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF1039_1622
AFIJ01000002.1	Genbank	tRNA	1751	1826	.	+	.	ID=rna-HMPREF1039_1622;Parent=gene-HMPREF1039_1622;gbkey=tRNA;locus_tag=HMPREF1039_1622;product=tRNA-Val
AFIJ01000002.1	Genbank	exon	1751	1826	.	+	.	ID=exon-HMPREF1039_1622-1;Parent=rna-HMPREF1039_1622;gbkey=tRNA;locus_tag=HMPREF1039_1622;product=tRNA-Val
##sequence-region AFIJ01000001.1 1 1841
##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1000568
AFIJ01000001.1	Genbank	region	1	1841	.	+	.	ID=AFIJ01000001.1:1..1841;Dbxref=taxon:1000568,HMP:1039;gbkey=Src;genome=genomic;mol_type=genomic DNA;old-name=Megasphaera sp. UPII 199-6;strain=UPII 199-6;type-material=type strain of Megasphaera lornae
AFIJ01000001.1	Genbank	gene	1	1841	.	-	.	ID=gene-HMPREF1039_1623;Name=HMPREF1039_1623;end_range=1841,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF1039_1623;partial=true;start_range=.,1
AFIJ01000001.1	Genbank	CDS	1	1841	.	-	2	ID=cds-EGL42583.1;Parent=gene-HMPREF1039_1623;Dbxref=NCBI_GP:EGL42583.1;Name=EGL42583.1;Note=this gene contains a nucleotide ambiguity which may be the result of a sequencing error;end_range=1841,.;gbkey=CDS;locus_tag=HMPREF1039_1623;partial=true;product=hypothetical protein;protein_id=EGL42583.1;start_range=.,1;transl_table=11
###