##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM25884v1 #!genome-build-accession NCBI_Assembly:GCA_000258845.1 ##sequence-region AIHX01000001.1 1 2073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000001.1 Genbank region 1 2073 . + . ID=AIHX01000001.1:1..2073;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000001.1 Genbank gene 1 800 . - . ID=gene-HP17_00005;Name=HP17_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00005;partial=true;start_range=.,1 AIHX01000001.1 Genbank CDS 1 800 . - 0 ID=cds-EIE30731.1;Parent=gene-HP17_00005;Dbxref=NCBI_GP:EIE30731.1;Name=EIE30731.1;gbkey=CDS;locus_tag=HP17_00005;partial=true;product=Hypothetical protein;protein_id=EIE30731.1;start_range=.,1;transl_table=11 AIHX01000001.1 Genbank gene 899 2073 . - . ID=gene-HP17_00010;Name=HP17_00010;end_range=2073,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00010;partial=true AIHX01000001.1 Genbank CDS 899 2073 . - 2 ID=cds-EIE30732.1;Parent=gene-HP17_00010;Dbxref=NCBI_GP:EIE30732.1;Name=EIE30732.1;Note=COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase;end_range=2073,.;gbkey=CDS;locus_tag=HP17_00010;partial=true;product=phosphoenolpyruvate synthase;protein_id=EIE30732.1;transl_table=11 ##sequence-region AIHX01000002.1 1 13879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000002.1 Genbank region 1 13879 . + . ID=AIHX01000002.1:1..13879;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000002.1 Genbank gene 1 636 . + . ID=gene-HP17_00400;Name=HP17_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00400;partial=true;start_range=.,1 AIHX01000002.1 Genbank CDS 1 636 . + 0 ID=cds-EIE30715.1;Parent=gene-HP17_00400;Dbxref=NCBI_GP:EIE30715.1;Name=EIE30715.1;Note=COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase;gbkey=CDS;locus_tag=HP17_00400;partial=true;product=multifunctional KHG/KDPG aldolase;protein_id=EIE30715.1;start_range=.,1;transl_table=11 AIHX01000002.1 Genbank gene 711 1583 . + . ID=gene-HP17_00405;Name=HP17_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00405 AIHX01000002.1 Genbank CDS 711 1583 . + 0 ID=cds-EIE30716.1;Parent=gene-HP17_00405;Dbxref=NCBI_GP:EIE30716.1;Name=EIE30716.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_00405;product=putative beta-lactamase HcpC;protein_id=EIE30716.1;transl_table=11 AIHX01000002.1 Genbank gene 1800 2552 . - . ID=gene-HP17_00410;Name=HP17_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00410 AIHX01000002.1 Genbank CDS 1800 2552 . - 0 ID=cds-EIE30717.1;Parent=gene-HP17_00410;Dbxref=NCBI_GP:EIE30717.1;Name=EIE30717.1;Note=COG4221 Short-chain alcohol dehydrogenase of unknown specificity;gbkey=CDS;locus_tag=HP17_00410;product=short chain alcohol dehydrogenase;protein_id=EIE30717.1;transl_table=11 AIHX01000002.1 Genbank gene 2570 4105 . - . ID=gene-HP17_00415;Name=HP17_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00415 AIHX01000002.1 Genbank CDS 2570 4105 . - 0 ID=cds-EIE30718.1;Parent=gene-HP17_00415;Dbxref=NCBI_GP:EIE30718.1;Name=EIE30718.1;gbkey=CDS;locus_tag=HP17_00415;product=putative outer membrane protein;protein_id=EIE30718.1;transl_table=11 AIHX01000002.1 Genbank gene 4263 4406 . - . ID=gene-HP17_00420;Name=HP17_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00420 AIHX01000002.1 Genbank CDS 4263 4406 . - 0 ID=cds-EIE30719.1;Parent=gene-HP17_00420;Dbxref=NCBI_GP:EIE30719.1;Name=EIE30719.1;gbkey=CDS;locus_tag=HP17_00420;product=Hypothetical protein;protein_id=EIE30719.1;transl_table=11 AIHX01000002.1 Genbank gene 4531 4606 . - . ID=gene-HP17_t00482;Name=HP17_t00482;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t00482 AIHX01000002.1 Genbank tRNA 4531 4606 . - . ID=rna-HP17_t00482;Parent=gene-HP17_t00482;gbkey=tRNA;locus_tag=HP17_t00482;product=tRNA-Ala AIHX01000002.1 Genbank exon 4531 4606 . - . ID=exon-HP17_t00482-1;Parent=rna-HP17_t00482;gbkey=tRNA;locus_tag=HP17_t00482;product=tRNA-Ala AIHX01000002.1 Genbank gene 4622 4698 . - . ID=gene-HP17_t00484;Name=HP17_t00484;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t00484 AIHX01000002.1 Genbank tRNA 4622 4698 . - . ID=rna-HP17_t00484;Parent=gene-HP17_t00484;gbkey=tRNA;locus_tag=HP17_t00484;product=tRNA-Ile AIHX01000002.1 Genbank exon 4622 4698 . - . ID=exon-HP17_t00484-1;Parent=rna-HP17_t00484;gbkey=tRNA;locus_tag=HP17_t00484;product=tRNA-Ile AIHX01000002.1 Genbank gene 4812 5846 . + . ID=gene-HP17_00425;Name=HP17_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00425 AIHX01000002.1 Genbank CDS 4812 5846 . + 0 ID=cds-EIE30720.1;Parent=gene-HP17_00425;Dbxref=NCBI_GP:EIE30720.1;Name=EIE30720.1;Note=COG1087 UDP-glucose 4-epimerase;gbkey=CDS;locus_tag=HP17_00425;product=UDP-glucose 4-epimerase;protein_id=EIE30720.1;transl_table=11 AIHX01000002.1 Genbank gene 5840 6568 . - . ID=gene-HP17_00430;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=HP17_00430 AIHX01000002.1 Genbank CDS 5840 6568 . - 0 ID=cds-EIE30721.1;Parent=gene-HP17_00430;Dbxref=NCBI_GP:EIE30721.1;Name=EIE30721.1;Note=COG0101 Pseudouridylate synthase;gbkey=CDS;gene=truA;locus_tag=HP17_00430;product=tRNA pseudouridine synthase A;protein_id=EIE30721.1;transl_table=11 AIHX01000002.1 Genbank gene 6569 7606 . - . ID=gene-HP17_00435;Name=HP17_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00435 AIHX01000002.1 Genbank CDS 6569 7606 . - 0 ID=cds-EIE30722.1;Parent=gene-HP17_00435;Dbxref=NCBI_GP:EIE30722.1;Name=EIE30722.1;Note=COG0795 Predicted permeases;gbkey=CDS;locus_tag=HP17_00435;product=Hypothetical protein;protein_id=EIE30722.1;transl_table=11 AIHX01000002.1 Genbank gene 7617 8246 . - . ID=gene-HP17_00440;Name=pcm;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=HP17_00440 AIHX01000002.1 Genbank CDS 7617 8246 . - 0 ID=cds-EIE30723.1;Parent=gene-HP17_00440;Dbxref=NCBI_GP:EIE30723.1;Name=EIE30723.1;Note=COG2518 Protein-L-isoaspartate carboxylmethyltransferase;gbkey=CDS;gene=pcm;locus_tag=HP17_00440;product=protein-L-isoaspartate O-methyltransferase;protein_id=EIE30723.1;transl_table=11 AIHX01000002.1 Genbank gene 8256 9281 . - . ID=gene-HP17_00445;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=HP17_00445 AIHX01000002.1 Genbank CDS 8256 9281 . - 0 ID=cds-EIE30724.1;Parent=gene-HP17_00445;Dbxref=NCBI_GP:EIE30724.1;Name=EIE30724.1;Note=COG0208 Ribonucleotide reductase%2C beta subunit;gbkey=CDS;gene=nrdF;locus_tag=HP17_00445;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=EIE30724.1;transl_table=11 AIHX01000002.1 Genbank sequence_feature 9460 9579 . + . ID=id-AIHX01000002.1:9460..9579;Note=potential protein location (Hypothetical protein HP17_00450 [Helicobacter pylori 17874]) that overlaps RNA (tRNA-L);gbkey=misc_feature AIHX01000002.1 Genbank gene 9481 9565 . + . ID=gene-HP17_t00486;Name=HP17_t00486;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t00486 AIHX01000002.1 Genbank tRNA 9481 9565 . + . ID=rna-HP17_t00486;Parent=gene-HP17_t00486;gbkey=tRNA;locus_tag=HP17_t00486;product=tRNA-Leu AIHX01000002.1 Genbank exon 9481 9565 . + . ID=exon-HP17_t00486-1;Parent=rna-HP17_t00486;gbkey=tRNA;locus_tag=HP17_t00486;product=tRNA-Leu AIHX01000002.1 Genbank gene 9601 10728 . - . ID=gene-HP17_00455;Name=HP17_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00455 AIHX01000002.1 Genbank CDS 9601 10728 . - 0 ID=cds-EIE30725.1;Parent=gene-HP17_00455;Dbxref=NCBI_GP:EIE30725.1;Name=EIE30725.1;Note=COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis;gbkey=CDS;locus_tag=HP17_00455;product=spore coat polysaccharide biosynthesis protein C;protein_id=EIE30725.1;transl_table=11 AIHX01000002.1 Genbank gene 10725 11333 . - . ID=gene-HP17_00460;Name=HP17_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00460 AIHX01000002.1 Genbank CDS 10725 11333 . - 0 ID=cds-EIE30726.1;Parent=gene-HP17_00460;Dbxref=NCBI_GP:EIE30726.1;Name=EIE30726.1;gbkey=CDS;locus_tag=HP17_00460;product=Hypothetical protein;protein_id=EIE30726.1;transl_table=11 AIHX01000002.1 Genbank gene 11427 11975 . - . ID=gene-HP17_00465;Name=HP17_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00465 AIHX01000002.1 Genbank CDS 11427 11975 . - 0 ID=cds-EIE30727.1;Parent=gene-HP17_00465;Dbxref=NCBI_GP:EIE30727.1;Name=EIE30727.1;gbkey=CDS;locus_tag=HP17_00465;product=Hypothetical protein;protein_id=EIE30727.1;transl_table=11 AIHX01000002.1 Genbank gene 11975 12928 . - . ID=gene-HP17_00470;Name=HP17_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00470 AIHX01000002.1 Genbank CDS 11975 12928 . - 0 ID=cds-EIE30728.1;Parent=gene-HP17_00470;Dbxref=NCBI_GP:EIE30728.1;Name=EIE30728.1;gbkey=CDS;locus_tag=HP17_00470;product=adenine methyltransferase;protein_id=EIE30728.1;transl_table=11 AIHX01000002.1 Genbank gene 13031 13879 . - . ID=gene-HP17_00475;Name=HP17_00475;end_range=13879,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00475;partial=true AIHX01000002.1 Genbank CDS 13031 13879 . - 0 ID=cds-EIE30729.1;Parent=gene-HP17_00475;Dbxref=NCBI_GP:EIE30729.1;Name=EIE30729.1;Note=COG0439 Biotin carboxylase;end_range=13879,.;gbkey=CDS;locus_tag=HP17_00475;partial=true;product=biotin carboxylase;protein_id=EIE30729.1;transl_table=11 ##sequence-region AIHX01000003.1 1 22054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000003.1 Genbank region 1 22054 . + . ID=AIHX01000003.1:1..22054;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000003.1 Genbank gene 1 370 . - . ID=gene-HP17_05860;Name=HP17_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05860;partial=true;start_range=.,1 AIHX01000003.1 Genbank CDS 1 370 . - 0 ID=cds-EIE30693.1;Parent=gene-HP17_05860;Dbxref=NCBI_GP:EIE30693.1;Name=EIE30693.1;gbkey=CDS;locus_tag=HP17_05860;partial=true;product=Hypothetical protein;protein_id=EIE30693.1;start_range=.,1;transl_table=11 AIHX01000003.1 Genbank gene 383 1066 . - . ID=gene-HP17_05865;Name=HP17_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05865 AIHX01000003.1 Genbank CDS 383 1066 . - 0 ID=cds-EIE30694.1;Parent=gene-HP17_05865;Dbxref=NCBI_GP:EIE30694.1;Name=EIE30694.1;Note=COG0566 rRNA methylases;gbkey=CDS;locus_tag=HP17_05865;product=RNA methyltransferase;protein_id=EIE30694.1;transl_table=11 AIHX01000003.1 Genbank gene 1079 1942 . - . ID=gene-HP17_05870;Name=HP17_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05870 AIHX01000003.1 Genbank CDS 1079 1942 . - 0 ID=cds-EIE30695.1;Parent=gene-HP17_05870;Dbxref=NCBI_GP:EIE30695.1;Name=EIE30695.1;Note=COG0313 Predicted methyltransferases;gbkey=CDS;locus_tag=HP17_05870;product=putative methylase;protein_id=EIE30695.1;transl_table=11 AIHX01000003.1 Genbank gene 1967 2170 . - . ID=gene-HP17_05875;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HP17_05875 AIHX01000003.1 Genbank CDS 1967 2170 . - 0 ID=cds-EIE30696.1;Parent=gene-HP17_05875;Dbxref=NCBI_GP:EIE30696.1;Name=EIE30696.1;Note=COG0254 Ribosomal protein L31;gbkey=CDS;gene=rpmE;locus_tag=HP17_05875;product=50S ribosomal protein L31;protein_id=EIE30696.1;transl_table=11 AIHX01000003.1 Genbank gene 2436 3752 . + . ID=gene-HP17_05880;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=HP17_05880 AIHX01000003.1 Genbank CDS 2436 3752 . + 0 ID=cds-EIE30697.1;Parent=gene-HP17_05880;Dbxref=NCBI_GP:EIE30697.1;Name=EIE30697.1;Note=COG1158 Transcription termination factor;gbkey=CDS;gene=rho;locus_tag=HP17_05880;product=transcription termination factor Rho;protein_id=EIE30697.1;transl_table=11 AIHX01000003.1 Genbank gene 3789 4556 . + . ID=gene-HP17_05885;Name=HP17_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05885 AIHX01000003.1 Genbank CDS 3789 4556 . + 0 ID=cds-EIE30698.1;Parent=gene-HP17_05885;Dbxref=NCBI_GP:EIE30698.1;Name=EIE30698.1;Note=COG0796 Glutamate racemase;gbkey=CDS;locus_tag=HP17_05885;product=glutamate racemase;protein_id=EIE30698.1;transl_table=11 AIHX01000003.1 Genbank gene 4714 4977 . - . ID=gene-HP17_05890;Name=HP17_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05890 AIHX01000003.1 Genbank CDS 4714 4977 . - 0 ID=cds-EIE30699.1;Parent=gene-HP17_05890;Dbxref=NCBI_GP:EIE30699.1;Name=EIE30699.1;Note=COG1112 Superfamily I DNA and RNA helicases and helicase subunits;gbkey=CDS;locus_tag=HP17_05890;product=regulator of nonsense transcripts 1;protein_id=EIE30699.1;transl_table=11 AIHX01000003.1 Genbank gene 5628 9071 . - . ID=gene-HP17_05895;Name=HP17_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05895 AIHX01000003.1 Genbank CDS 5628 9071 . - 0 ID=cds-EIE30700.1;Parent=gene-HP17_05895;Dbxref=NCBI_GP:EIE30700.1;Name=EIE30700.1;Note=COG0419 ATPase involved in DNA repair;gbkey=CDS;locus_tag=HP17_05895;product=cytotoxin-associated protein A;protein_id=EIE30700.1;transl_table=11 AIHX01000003.1 Genbank gene 9520 9747 . + . ID=gene-HP17_05900;Name=HP17_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05900 AIHX01000003.1 Genbank CDS 9520 9747 . + 0 ID=cds-EIE30701.1;Parent=gene-HP17_05900;Dbxref=NCBI_GP:EIE30701.1;Name=EIE30701.1;gbkey=CDS;locus_tag=HP17_05900;product=cag pathogenicity island protein B;protein_id=EIE30701.1;transl_table=11 AIHX01000003.1 Genbank gene 9892 10239 . + . ID=gene-HP17_05905;Name=HP17_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05905 AIHX01000003.1 Genbank CDS 9892 10239 . + 0 ID=cds-EIE30702.1;Parent=gene-HP17_05905;Dbxref=NCBI_GP:EIE30702.1;Name=EIE30702.1;gbkey=CDS;locus_tag=HP17_05905;product=cag pathogenicity island protein (cag25);protein_id=EIE30702.1;transl_table=11 AIHX01000003.1 Genbank gene 10241 10870 . + . ID=gene-HP17_05910;Name=HP17_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05910 AIHX01000003.1 Genbank CDS 10241 10870 . + 0 ID=cds-EIE30703.1;Parent=gene-HP17_05910;Dbxref=NCBI_GP:EIE30703.1;Name=EIE30703.1;gbkey=CDS;locus_tag=HP17_05910;product=cag pathogenicity island protein D;protein_id=EIE30703.1;transl_table=11 AIHX01000003.1 Genbank gene 10879 13830 . + . ID=gene-HP17_05915;Name=HP17_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05915 AIHX01000003.1 Genbank CDS 10879 13830 . + 0 ID=cds-EIE30704.1;Parent=gene-HP17_05915;Dbxref=NCBI_GP:EIE30704.1;Name=EIE30704.1;Note=COG3451 Type IV secretory pathway%2C VirB4 components;gbkey=CDS;locus_tag=HP17_05915;product=cag pathogenicity island protein E;protein_id=EIE30704.1;transl_table=11 AIHX01000003.1 Genbank gene 13832 14638 . + . ID=gene-HP17_05920;Name=HP17_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05920 AIHX01000003.1 Genbank CDS 13832 14638 . + 0 ID=cds-EIE30705.1;Parent=gene-HP17_05920;Dbxref=NCBI_GP:EIE30705.1;Name=EIE30705.1;gbkey=CDS;locus_tag=HP17_05920;product=cag pathogenicity island protein F;protein_id=EIE30705.1;transl_table=11 AIHX01000003.1 Genbank gene 14693 15121 . + . ID=gene-HP17_05925;Name=HP17_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05925 AIHX01000003.1 Genbank CDS 14693 15121 . + 0 ID=cds-EIE30706.1;Parent=gene-HP17_05925;Dbxref=NCBI_GP:EIE30706.1;Name=EIE30706.1;gbkey=CDS;locus_tag=HP17_05925;product=cag pathogenicity island protein G;protein_id=EIE30706.1;transl_table=11 AIHX01000003.1 Genbank gene 15137 16249 . + . ID=gene-HP17_05930;Name=HP17_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05930 AIHX01000003.1 Genbank CDS 15137 16249 . + 0 ID=cds-EIE30707.1;Parent=gene-HP17_05930;Dbxref=NCBI_GP:EIE30707.1;Name=EIE30707.1;Note=COG0249 Mismatch repair ATPase (MutS family);gbkey=CDS;locus_tag=HP17_05930;product=cag pathogenicity island protein H;protein_id=EIE30707.1;transl_table=11 AIHX01000003.1 Genbank gene 16260 17405 . + . ID=gene-HP17_05935;Name=HP17_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05935 AIHX01000003.1 Genbank CDS 16260 17405 . + 0 ID=cds-EIE30708.1;Parent=gene-HP17_05935;Dbxref=NCBI_GP:EIE30708.1;Name=EIE30708.1;gbkey=CDS;locus_tag=HP17_05935;product=cag pathogenicity island protein (cag19);protein_id=EIE30708.1;transl_table=11 AIHX01000003.1 Genbank gene 17402 18115 . + . ID=gene-HP17_05940;Name=HP17_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05940 AIHX01000003.1 Genbank CDS 17402 18115 . + 0 ID=cds-EIE30709.1;Parent=gene-HP17_05940;Dbxref=NCBI_GP:EIE30709.1;Name=EIE30709.1;gbkey=CDS;locus_tag=HP17_05940;product=cag pathogenicity island protein L;protein_id=EIE30709.1;transl_table=11 AIHX01000003.1 Genbank gene 18197 19117 . - . ID=gene-HP17_05945;Name=HP17_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05945 AIHX01000003.1 Genbank CDS 18197 19117 . - 0 ID=cds-EIE30710.1;Parent=gene-HP17_05945;Dbxref=NCBI_GP:EIE30710.1;Name=EIE30710.1;gbkey=CDS;locus_tag=HP17_05945;product=cag island protein;protein_id=EIE30710.1;transl_table=11 AIHX01000003.1 Genbank gene 19132 20262 . - . ID=gene-HP17_05950;Name=HP17_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05950 AIHX01000003.1 Genbank CDS 19132 20262 . - 0 ID=cds-EIE30711.1;Parent=gene-HP17_05950;Dbxref=NCBI_GP:EIE30711.1;Name=EIE30711.1;gbkey=CDS;locus_tag=HP17_05950;product=cag pathogenicity island protein M;protein_id=EIE30711.1;transl_table=11 AIHX01000003.1 Genbank gene 21342 21527 . + . ID=gene-HP17_05955;Name=HP17_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05955 AIHX01000003.1 Genbank CDS 21342 21527 . + 0 ID=cds-EIE30712.1;Parent=gene-HP17_05955;Dbxref=NCBI_GP:EIE30712.1;Name=EIE30712.1;gbkey=CDS;locus_tag=HP17_05955;product=Hypothetical protein;protein_id=EIE30712.1;transl_table=11 AIHX01000003.1 Genbank gene 21539 21844 . + . ID=gene-HP17_05960;Name=HP17_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05960 AIHX01000003.1 Genbank CDS 21539 21844 . + 0 ID=cds-EIE30713.1;Parent=gene-HP17_05960;Dbxref=NCBI_GP:EIE30713.1;Name=EIE30713.1;gbkey=CDS;locus_tag=HP17_05960;product=cag pathogenicity island protein Q;protein_id=EIE30713.1;transl_table=11 ##sequence-region AIHX01000004.1 1 17141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000004.1 Genbank region 1 17141 . + . ID=AIHX01000004.1:1..17141;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000004.1 Genbank gene 43 3039 . + . ID=gene-HP17_05965;Name=HP17_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05965 AIHX01000004.1 Genbank CDS 43 3039 . + 0 ID=cds-EIE30668.1;Parent=gene-HP17_05965;Dbxref=NCBI_GP:EIE30668.1;Name=EIE30668.1;Note=COG0610 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases;gbkey=CDS;locus_tag=HP17_05965;product=type I restriction enzyme subunit R;protein_id=EIE30668.1;transl_table=11 AIHX01000004.1 Genbank gene 3132 3911 . + . ID=gene-HP17_05970;Name=HP17_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05970 AIHX01000004.1 Genbank CDS 3132 3911 . + 0 ID=cds-EIE30669.1;Parent=gene-HP17_05970;Dbxref=NCBI_GP:EIE30669.1;Name=EIE30669.1;Note=COG2145 Hydroxyethylthiazole kinase%2C sugar kinase family;gbkey=CDS;locus_tag=HP17_05970;product=hydroxyethylthiazole kinase;protein_id=EIE30669.1;transl_table=11 AIHX01000004.1 Genbank pseudogene 3908 4929 . + . ID=gene-HP17_05975;Name=HP17_05975;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_05975;pseudo=true AIHX01000004.1 Genbank sequence_feature 3908 4929 . + . ID=id-HP17_05975;Note=potential frameshift: common BLAST hit: gi|208434757|ref|YP_002266423.1| thiamine biosynthesis protein;gbkey=misc_feature;locus_tag=HP17_05975;pseudo=true AIHX01000004.1 Genbank gene 4922 5581 . + . ID=gene-HP17_05985;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=HP17_05985 AIHX01000004.1 Genbank CDS 4922 5581 . + 0 ID=cds-EIE30670.1;Parent=gene-HP17_05985;Dbxref=NCBI_GP:EIE30670.1;Name=EIE30670.1;Note=COG0352 Thiamine monophosphate synthase;gbkey=CDS;gene=thiE;locus_tag=HP17_05985;product=thiamine-phosphate pyrophosphorylase;protein_id=EIE30670.1;transl_table=11 AIHX01000004.1 Genbank gene 5636 6373 . - . ID=gene-HP17_05990;Name=HP17_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05990 AIHX01000004.1 Genbank CDS 5636 6373 . - 0 ID=cds-EIE30671.1;Parent=gene-HP17_05990;Dbxref=NCBI_GP:EIE30671.1;Name=EIE30671.1;gbkey=CDS;locus_tag=HP17_05990;product=Hypothetical protein;protein_id=EIE30671.1;transl_table=11 AIHX01000004.1 Genbank gene 6373 7650 . - . ID=gene-HP17_05995;Name=HP17_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05995 AIHX01000004.1 Genbank CDS 6373 7650 . - 0 ID=cds-EIE30672.1;Parent=gene-HP17_05995;Dbxref=NCBI_GP:EIE30672.1;Name=EIE30672.1;Note=COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase;gbkey=CDS;locus_tag=HP17_05995;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=EIE30672.1;transl_table=11 AIHX01000004.1 Genbank gene 7647 8630 . - . ID=gene-HP17_06000;Name=HP17_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06000 AIHX01000004.1 Genbank CDS 7647 8630 . - 0 ID=cds-EIE30673.1;Parent=gene-HP17_06000;Dbxref=NCBI_GP:EIE30673.1;Name=EIE30673.1;Note=COG1086 Predicted nucleoside-diphosphate sugar epimerases;gbkey=CDS;locus_tag=HP17_06000;product=UDP-GlcNAc C6 dehydratase;protein_id=EIE30673.1;transl_table=11 AIHX01000004.1 Genbank gene 8652 10415 . - . ID=gene-HP17_06005;Name=HP17_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06005 AIHX01000004.1 Genbank CDS 8652 10415 . - 0 ID=cds-EIE30674.1;Parent=gene-HP17_06005;Dbxref=NCBI_GP:EIE30674.1;Name=EIE30674.1;Note=COG2067 Long-chain fatty acid transport protein;gbkey=CDS;locus_tag=HP17_06005;product=outer membrane protein P1;protein_id=EIE30674.1;transl_table=11 AIHX01000004.1 Genbank gene 10412 11029 . - . ID=gene-HP17_06010;Name=HP17_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06010 AIHX01000004.1 Genbank CDS 10412 11029 . - 0 ID=cds-EIE30675.1;Parent=gene-HP17_06010;Dbxref=NCBI_GP:EIE30675.1;Name=EIE30675.1;gbkey=CDS;locus_tag=HP17_06010;product=Hypothetical protein;protein_id=EIE30675.1;transl_table=11 AIHX01000004.1 Genbank gene 11049 11654 . - . ID=gene-HP17_06015;Name=HP17_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06015 AIHX01000004.1 Genbank CDS 11049 11654 . - 0 ID=cds-EIE30676.1;Parent=gene-HP17_06015;Dbxref=NCBI_GP:EIE30676.1;Name=EIE30676.1;Note=COG3018 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_06015;product=Hypothetical protein;protein_id=EIE30676.1;transl_table=11 AIHX01000004.1 Genbank gene 12030 12137 . - . ID=gene-HP17_06020;Name=HP17_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06020 AIHX01000004.1 Genbank CDS 12030 12137 . - 0 ID=cds-EIE30677.1;Parent=gene-HP17_06020;Dbxref=NCBI_GP:EIE30677.1;Name=EIE30677.1;gbkey=CDS;locus_tag=HP17_06020;product=Hypothetical protein;protein_id=EIE30677.1;transl_table=11 AIHX01000004.1 Genbank gene 12233 12309 . - . ID=gene-HP17_t06057;Name=HP17_t06057;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t06057 AIHX01000004.1 Genbank tRNA 12233 12309 . - . ID=rna-HP17_t06057;Parent=gene-HP17_t06057;gbkey=tRNA;locus_tag=HP17_t06057;product=tRNA-Arg AIHX01000004.1 Genbank exon 12233 12309 . - . ID=exon-HP17_t06057-1;Parent=rna-HP17_t06057;gbkey=tRNA;locus_tag=HP17_t06057;product=tRNA-Arg AIHX01000004.1 Genbank gene 12361 12645 . - . ID=gene-HP17_06025;Name=HP17_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06025 AIHX01000004.1 Genbank CDS 12361 12645 . - 0 ID=cds-EIE30678.1;Parent=gene-HP17_06025;Dbxref=NCBI_GP:EIE30678.1;Name=EIE30678.1;Note=COG0776 Bacterial nucleoid DNA-binding protein;gbkey=CDS;locus_tag=HP17_06025;product=DNA-binding protein HU;protein_id=EIE30678.1;transl_table=11 AIHX01000004.1 Genbank gene 12787 14175 . - . ID=gene-HP17_06030;Name=HP17_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06030 AIHX01000004.1 Genbank CDS 12787 14175 . - 0 ID=cds-EIE30679.1;Parent=gene-HP17_06030;Dbxref=NCBI_GP:EIE30679.1;Name=EIE30679.1;Note=COG1160 Predicted GTPases;gbkey=CDS;locus_tag=HP17_06030;product=GTP-binding protein Der;protein_id=EIE30679.1;transl_table=11 AIHX01000004.1 Genbank gene 14252 15130 . + . ID=gene-HP17_06035;Name=HP17_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06035 AIHX01000004.1 Genbank CDS 14252 15130 . + 0 ID=cds-EIE30680.1;Parent=gene-HP17_06035;Dbxref=NCBI_GP:EIE30680.1;Name=EIE30680.1;gbkey=CDS;locus_tag=HP17_06035;product=Hypothetical protein;protein_id=EIE30680.1;transl_table=11 AIHX01000004.1 Genbank gene 15217 16005 . + . ID=gene-HP17_06040;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=HP17_06040 AIHX01000004.1 Genbank CDS 15217 16005 . + 0 ID=cds-EIE30681.1;Parent=gene-HP17_06040;Dbxref=NCBI_GP:EIE30681.1;Name=EIE30681.1;Note=COG0421 Spermidine synthase;gbkey=CDS;gene=speE;locus_tag=HP17_06040;product=spermidine synthase;protein_id=EIE30681.1;transl_table=11 AIHX01000004.1 Genbank gene 16007 16597 . + . ID=gene-HP17_06045;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=HP17_06045 AIHX01000004.1 Genbank CDS 16007 16597 . + 0 ID=cds-EIE30682.1;Parent=gene-HP17_06045;Dbxref=NCBI_GP:EIE30682.1;Name=EIE30682.1;Note=COG0237 Dephospho-CoA kinase;gbkey=CDS;gene=coaE;locus_tag=HP17_06045;product=dephospho-CoA kinase;protein_id=EIE30682.1;transl_table=11 AIHX01000004.1 Genbank gene 16655 17141 . + . ID=gene-HP17_06050;Name=gatA;end_range=17141,.;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=HP17_06050;partial=true AIHX01000004.1 Genbank CDS 16655 17141 . + 0 ID=cds-EIE30683.1;Parent=gene-HP17_06050;Dbxref=NCBI_GP:EIE30683.1;Name=EIE30683.1;Note=COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases;end_range=17141,.;gbkey=CDS;gene=gatA;locus_tag=HP17_06050;partial=true;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=EIE30683.1;transl_table=11 ##sequence-region AIHX01000005.1 1 4366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000005.1 Genbank region 1 4366 . + . ID=AIHX01000005.1:1..4366;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000005.1 Genbank gene 1 844 . + . ID=gene-HP17_06057;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=HP17_06057;partial=true;start_range=.,1 AIHX01000005.1 Genbank CDS 1 844 . + 1 ID=cds-EIE30650.1;Parent=gene-HP17_06057;Dbxref=NCBI_GP:EIE30650.1;Name=EIE30650.1;Note=COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases;gbkey=CDS;gene=gatA;locus_tag=HP17_06057;partial=true;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=EIE30650.1;start_range=.,1;transl_table=11 AIHX01000005.1 Genbank gene 854 2299 . + . ID=gene-HP17_06062;Name=HP17_06062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06062 AIHX01000005.1 Genbank CDS 854 2299 . + 0 ID=cds-EIE30651.1;Parent=gene-HP17_06062;Dbxref=NCBI_GP:EIE30651.1;Name=EIE30651.1;Note=COG0516 IMP dehydrogenase/GMP reductase;gbkey=CDS;locus_tag=HP17_06062;product=inosine 5'-monophosphate dehydrogenase;protein_id=EIE30651.1;transl_table=11 AIHX01000005.1 Genbank gene 2421 3101 . + . ID=gene-HP17_06067;Name=HP17_06067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06067 AIHX01000005.1 Genbank CDS 2421 3101 . + 0 ID=cds-EIE30652.1;Parent=gene-HP17_06067;Dbxref=NCBI_GP:EIE30652.1;Name=EIE30652.1;Note=COG0356 F0F1-type ATP synthase%2C subunit a;gbkey=CDS;locus_tag=HP17_06067;product=F0F1 ATP synthase subunit A;protein_id=EIE30652.1;transl_table=11 AIHX01000005.1 Genbank gene 3422 3670 . + . ID=gene-HP17_06072;Name=HP17_06072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06072 AIHX01000005.1 Genbank CDS 3422 3670 . + 0 ID=cds-EIE30653.1;Parent=gene-HP17_06072;Dbxref=NCBI_GP:EIE30653.1;Name=EIE30653.1;Note=COG0724 RNA-binding proteins (RRM domain);gbkey=CDS;locus_tag=HP17_06072;product=Nucleotide binding protein;protein_id=EIE30653.1;transl_table=11 AIHX01000005.1 Genbank gene 3892 4366 . - . ID=gene-HP17_06077;Name=HP17_06077;end_range=4366,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06077;partial=true AIHX01000005.1 Genbank CDS 3892 4366 . - 1 ID=cds-EIE30654.1;Parent=gene-HP17_06077;Dbxref=NCBI_GP:EIE30654.1;Name=EIE30654.1;Note=COG3306 Glycosyltransferase involved in LPS biosynthesis;end_range=4366,.;gbkey=CDS;locus_tag=HP17_06077;partial=true;product=beta-1%2C4-galactosyl transferase;protein_id=EIE30654.1;transl_table=11 ##sequence-region AIHX01000006.1 1 7422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000006.1 Genbank region 1 7422 . + . ID=AIHX01000006.1:1..7422;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000006.1 Genbank pseudogene 1 1316 . + . ID=gene-HP17_06097;Name=HP17_06097;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06097;partial=true;pseudo=true;start_range=.,1 AIHX01000006.1 Genbank sequence_feature 912 1316 . + . ID=id-HP17_06097;Note=potential frameshift;gbkey=misc_feature;locus_tag=HP17_06097;pseudo=true AIHX01000006.1 Genbank gene 1313 2008 . + . ID=gene-HP17_06102;Name=HP17_06102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06102 AIHX01000006.1 Genbank CDS 1313 2008 . + 0 ID=cds-EIE30639.1;Parent=gene-HP17_06102;Dbxref=NCBI_GP:EIE30639.1;Name=EIE30639.1;Note=COG3177 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_06102;product=Hypothetical protein;protein_id=EIE30639.1;transl_table=11 AIHX01000006.1 Genbank gene 2077 2211 . - . ID=gene-HP17_06107;Name=HP17_06107;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06107 AIHX01000006.1 Genbank CDS 2077 2211 . - 0 ID=cds-EIE30640.1;Parent=gene-HP17_06107;Dbxref=NCBI_GP:EIE30640.1;Name=EIE30640.1;gbkey=CDS;locus_tag=HP17_06107;product=Hypothetical protein;protein_id=EIE30640.1;transl_table=11 AIHX01000006.1 Genbank gene 2272 4287 . - . ID=gene-HP17_06112;Name=HP17_06112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06112 AIHX01000006.1 Genbank CDS 2272 4287 . - 0 ID=cds-EIE30641.1;Parent=gene-HP17_06112;Dbxref=NCBI_GP:EIE30641.1;Name=EIE30641.1;gbkey=CDS;locus_tag=HP17_06112;product=Hypothetical protein;protein_id=EIE30641.1;transl_table=11 AIHX01000006.1 Genbank gene 4277 4621 . - . ID=gene-HP17_06117;Name=HP17_06117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06117 AIHX01000006.1 Genbank CDS 4277 4621 . - 0 ID=cds-EIE30642.1;Parent=gene-HP17_06117;Dbxref=NCBI_GP:EIE30642.1;Name=EIE30642.1;gbkey=CDS;locus_tag=HP17_06117;product=Hypothetical protein;protein_id=EIE30642.1;transl_table=11 AIHX01000006.1 Genbank gene 4593 4721 . + . ID=gene-HP17_06122;Name=HP17_06122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06122 AIHX01000006.1 Genbank CDS 4593 4721 . + 0 ID=cds-EIE30643.1;Parent=gene-HP17_06122;Dbxref=NCBI_GP:EIE30643.1;Name=EIE30643.1;gbkey=CDS;locus_tag=HP17_06122;product=Hypothetical protein;protein_id=EIE30643.1;transl_table=11 AIHX01000006.1 Genbank pseudogene 4823 5354 . + . ID=gene-HP17_06127;Name=HP17_06127;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06127;pseudo=true AIHX01000006.1 Genbank sequence_feature 4823 5354 . + . ID=id-HP17_06127;Note=nonfunctional due to frameshift;gbkey=misc_feature;locus_tag=HP17_06127;pseudo=true AIHX01000006.1 Genbank gene 5328 6740 . - . ID=gene-HP17_06137;Name=HP17_06137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06137 AIHX01000006.1 Genbank CDS 5328 6740 . - 0 ID=cds-EIE30644.1;Parent=gene-HP17_06137;Dbxref=NCBI_GP:EIE30644.1;Name=EIE30644.1;gbkey=CDS;locus_tag=HP17_06137;product=Hypothetical protein;protein_id=EIE30644.1;transl_table=11 AIHX01000006.1 Genbank gene 7062 7208 . + . ID=gene-HP17_06142;Name=HP17_06142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06142 AIHX01000006.1 Genbank CDS 7062 7208 . + 0 ID=cds-EIE30645.1;Parent=gene-HP17_06142;Dbxref=NCBI_GP:EIE30645.1;Name=EIE30645.1;gbkey=CDS;locus_tag=HP17_06142;product=Hypothetical protein;protein_id=EIE30645.1;transl_table=11 ##sequence-region AIHX01000007.1 1 5507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000007.1 Genbank region 1 5507 . + . ID=AIHX01000007.1:1..5507;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000007.1 Genbank gene 1 294 . - . ID=gene-HP17_06147;Name=HP17_06147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06147;partial=true;start_range=.,1 AIHX01000007.1 Genbank CDS 1 294 . - 0 ID=cds-EIE30610.1;Parent=gene-HP17_06147;Dbxref=NCBI_GP:EIE30610.1;Name=EIE30610.1;gbkey=CDS;locus_tag=HP17_06147;partial=true;product=alpha-(1%2C3)-fucosyltransferase 11;protein_id=EIE30610.1;start_range=.,1;transl_table=11 AIHX01000007.1 Genbank gene 339 962 . - . ID=gene-HP17_06152;Name=HP17_06152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06152 AIHX01000007.1 Genbank CDS 339 962 . - 0 ID=cds-EIE30611.1;Parent=gene-HP17_06152;Dbxref=NCBI_GP:EIE30611.1;Name=EIE30611.1;Note=COG0560 Phosphoserine phosphatase;gbkey=CDS;locus_tag=HP17_06152;product=phosphoserine phosphatase;protein_id=EIE30611.1;transl_table=11 AIHX01000007.1 Genbank gene 978 1481 . - . ID=gene-HP17_06157;Name=HP17_06157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06157 AIHX01000007.1 Genbank CDS 978 1481 . - 0 ID=cds-EIE30612.1;Parent=gene-HP17_06157;Dbxref=NCBI_GP:EIE30612.1;Name=EIE30612.1;Note=COG1528 Ferritin-like protein;gbkey=CDS;locus_tag=HP17_06157;product=ferritin;protein_id=EIE30612.1;transl_table=11 AIHX01000007.1 Genbank gene 1783 2865 . + . ID=gene-HP17_06162;Name=HP17_06162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06162 AIHX01000007.1 Genbank CDS 1783 2865 . + 0 ID=cds-EIE30613.1;Parent=gene-HP17_06162;Dbxref=NCBI_GP:EIE30613.1;Name=EIE30613.1;Note=COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes;gbkey=CDS;locus_tag=HP17_06162;product=Hypothetical protein;protein_id=EIE30613.1;transl_table=11 AIHX01000007.1 Genbank gene 2987 5507 . + . ID=gene-HP17_06167;Name=HP17_06167;end_range=5507,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06167;partial=true AIHX01000007.1 Genbank CDS 2987 5507 . + 0 ID=cds-EIE30614.1;Parent=gene-HP17_06167;Dbxref=NCBI_GP:EIE30614.1;Name=EIE30614.1;Note=COG4775 Outer membrane protein/protective antigen OMA87;end_range=5507,.;gbkey=CDS;locus_tag=HP17_06167;partial=true;product=protective surface antigen D15;protein_id=EIE30614.1;transl_table=11 ##sequence-region AIHX01000008.1 1 4868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000008.1 Genbank region 1 4868 . + . ID=AIHX01000008.1:1..4868;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000008.1 Genbank gene 3 173 . + . ID=gene-HP17_06172;Name=HP17_06172;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06172 AIHX01000008.1 Genbank CDS 3 173 . + 0 ID=cds-EIE30605.1;Parent=gene-HP17_06172;Dbxref=NCBI_GP:EIE30605.1;Name=EIE30605.1;Note=COG4775 Outer membrane protein/protective antigen OMA87;gbkey=CDS;locus_tag=HP17_06172;product=protective surface antigen D15;protein_id=EIE30605.1;transl_table=11 AIHX01000008.1 Genbank gene 175 1236 . + . ID=gene-HP17_06177;Name=HP17_06177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06177 AIHX01000008.1 Genbank CDS 175 1236 . + 0 ID=cds-EIE30606.1;Parent=gene-HP17_06177;Dbxref=NCBI_GP:EIE30606.1;Name=EIE30606.1;Note=COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes;gbkey=CDS;locus_tag=HP17_06177;product=Hypothetical protein;protein_id=EIE30606.1;transl_table=11 AIHX01000008.1 Genbank gene 1242 2543 . + . ID=gene-HP17_06182;Name=HP17_06182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06182 AIHX01000008.1 Genbank CDS 1242 2543 . + 0 ID=cds-EIE30607.1;Parent=gene-HP17_06182;Dbxref=NCBI_GP:EIE30607.1;Name=EIE30607.1;Note=COG0612 Predicted Zn-dependent peptidases;gbkey=CDS;locus_tag=HP17_06182;product=processing zinc-metalloprotease;protein_id=EIE30607.1;transl_table=11 AIHX01000008.1 Genbank gene 2543 3967 . + . ID=gene-HP17_06187;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HP17_06187 AIHX01000008.1 Genbank CDS 2543 3967 . + 0 ID=cds-EIE30608.1;Parent=gene-HP17_06187;Dbxref=NCBI_GP:EIE30608.1;Name=EIE30608.1;Note=COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog);gbkey=CDS;gene=gatB;locus_tag=HP17_06187;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=EIE30608.1;transl_table=11 AIHX01000008.1 Genbank gene 3967 4868 . + . ID=gene-HP17_06192;Name=HP17_06192;end_range=4868,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06192;partial=true AIHX01000008.1 Genbank CDS 3967 4868 . + 0 ID=cds-EIE30609.1;Parent=gene-HP17_06192;Dbxref=NCBI_GP:EIE30609.1;Name=EIE30609.1;Note=COG0760 Parvulin-like peptidyl-prolyl isomerase;end_range=4868,.;gbkey=CDS;locus_tag=HP17_06192;partial=true;product=Hypothetical protein;protein_id=EIE30609.1;transl_table=11 ##sequence-region AIHX01000009.1 1 17561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000009.1 Genbank region 1 17561 . + . ID=AIHX01000009.1:1..17561;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000009.1 Genbank gene 1 302 . + . ID=gene-HP17_06197;Name=HP17_06197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06197;partial=true;start_range=.,1 AIHX01000009.1 Genbank CDS 1 302 . + 2 ID=cds-EIE30578.1;Parent=gene-HP17_06197;Dbxref=NCBI_GP:EIE30578.1;Name=EIE30578.1;Note=COG0760 Parvulin-like peptidyl-prolyl isomerase;gbkey=CDS;locus_tag=HP17_06197;partial=true;product=Hypothetical protein;protein_id=EIE30578.1;start_range=.,1;transl_table=11 AIHX01000009.1 Genbank gene 313 1323 . + . ID=gene-HP17_06202;Name=HP17_06202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06202 AIHX01000009.1 Genbank CDS 313 1323 . + 0 ID=cds-EIE30579.1;Parent=gene-HP17_06202;Dbxref=NCBI_GP:EIE30579.1;Name=EIE30579.1;Note=COG2956 Predicted N-acetylglucosaminyl transferase;gbkey=CDS;locus_tag=HP17_06202;product=Hypothetical protein;protein_id=EIE30579.1;transl_table=11 AIHX01000009.1 Genbank gene 1324 1755 . + . ID=gene-HP17_06207;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=HP17_06207 AIHX01000009.1 Genbank CDS 1324 1755 . + 0 ID=cds-EIE30580.1;Parent=gene-HP17_06207;Dbxref=NCBI_GP:EIE30580.1;Name=EIE30580.1;Note=COG0328 Ribonuclease HI;gbkey=CDS;gene=rnhA;locus_tag=HP17_06207;product=ribonuclease H;protein_id=EIE30580.1;transl_table=11 AIHX01000009.1 Genbank gene 1767 2486 . + . ID=gene-HP17_06212;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=HP17_06212 AIHX01000009.1 Genbank CDS 1767 2486 . + 0 ID=cds-EIE30581.1;Parent=gene-HP17_06212;Dbxref=NCBI_GP:EIE30581.1;Name=EIE30581.1;Note=COG0571 dsRNA-specific ribonuclease;gbkey=CDS;gene=rnc;locus_tag=HP17_06212;product=ribonuclease III;protein_id=EIE30581.1;transl_table=11 AIHX01000009.1 Genbank gene 2483 3580 . + . ID=gene-HP17_06217;Name=HP17_06217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06217 AIHX01000009.1 Genbank CDS 2483 3580 . + 0 ID=cds-EIE30582.1;Parent=gene-HP17_06217;Dbxref=NCBI_GP:EIE30582.1;Name=EIE30582.1;Note=COG0082 Chorismate synthase;gbkey=CDS;locus_tag=HP17_06217;product=chorismate synthase;protein_id=EIE30582.1;transl_table=11 AIHX01000009.1 Genbank gene 3617 4132 . + . ID=gene-HP17_06222;Name=HP17_06222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06222 AIHX01000009.1 Genbank CDS 3617 4132 . + 0 ID=cds-EIE30583.1;Parent=gene-HP17_06222;Dbxref=NCBI_GP:EIE30583.1;Name=EIE30583.1;gbkey=CDS;locus_tag=HP17_06222;product=Hypothetical protein;protein_id=EIE30583.1;transl_table=11 AIHX01000009.1 Genbank gene 4132 5505 . + . ID=gene-HP17_06227;Name=HP17_06227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06227 AIHX01000009.1 Genbank CDS 4132 5505 . + 0 ID=cds-EIE30584.1;Parent=gene-HP17_06227;Dbxref=NCBI_GP:EIE30584.1;Name=EIE30584.1;Note=COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases;gbkey=CDS;locus_tag=HP17_06227;product=coproporphyrinogen III oxidase;protein_id=EIE30584.1;transl_table=11 AIHX01000009.1 Genbank gene 5502 6803 . + . ID=gene-HP17_06232;Name=HP17_06232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06232 AIHX01000009.1 Genbank CDS 5502 6803 . + 0 ID=cds-EIE30585.1;Parent=gene-HP17_06232;Dbxref=NCBI_GP:EIE30585.1;Name=EIE30585.1;Note=COG0247 Fe-S oxidoreductase;gbkey=CDS;locus_tag=HP17_06232;product=glycerol-3-phosphate dehydrogenase;protein_id=EIE30585.1;transl_table=11 AIHX01000009.1 Genbank gene 6879 10997 . + . ID=gene-HP17_06237;Name=HP17_06237;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06237 AIHX01000009.1 Genbank CDS 6879 10997 . + 0 ID=cds-EIE30586.1;Parent=gene-HP17_06237;Dbxref=NCBI_GP:EIE30586.1;Name=EIE30586.1;Note=COG4889 Predicted helicase;gbkey=CDS;locus_tag=HP17_06237;product=Hypothetical protein;protein_id=EIE30586.1;transl_table=11 AIHX01000009.1 Genbank gene 11047 11442 . + . ID=gene-HP17_06242;Name=HP17_06242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06242 AIHX01000009.1 Genbank CDS 11047 11442 . + 0 ID=cds-EIE30587.1;Parent=gene-HP17_06242;Dbxref=NCBI_GP:EIE30587.1;Name=EIE30587.1;gbkey=CDS;locus_tag=HP17_06242;product=Hypothetical protein;protein_id=EIE30587.1;transl_table=11 AIHX01000009.1 Genbank gene 11662 12474 . + . ID=gene-HP17_06247;Name=HP17_06247;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06247 AIHX01000009.1 Genbank CDS 11662 12474 . + 0 ID=cds-EIE30588.1;Parent=gene-HP17_06247;Dbxref=NCBI_GP:EIE30588.1;Name=EIE30588.1;gbkey=CDS;locus_tag=HP17_06247;product=Outer membrane protein;protein_id=EIE30588.1;transl_table=11 AIHX01000009.1 Genbank gene 12633 13805 . + . ID=gene-HP17_06252;Name=HP17_06252;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06252 AIHX01000009.1 Genbank CDS 12633 13805 . + 0 ID=cds-EIE30589.1;Parent=gene-HP17_06252;Dbxref=NCBI_GP:EIE30589.1;Name=EIE30589.1;Note=COG0436 Aspartate/tyrosine/aromatic aminotransferase;gbkey=CDS;locus_tag=HP17_06252;product=aspartate aminotransferase;protein_id=EIE30589.1;transl_table=11 AIHX01000009.1 Genbank gene 14097 14618 . + . ID=gene-HP17_06257;Name=HP17_06257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06257 AIHX01000009.1 Genbank CDS 14097 14618 . + 0 ID=cds-EIE30590.1;Parent=gene-HP17_06257;Dbxref=NCBI_GP:EIE30590.1;Name=EIE30590.1;gbkey=CDS;locus_tag=HP17_06257;product=Hypothetical protein;protein_id=EIE30590.1;transl_table=11 AIHX01000009.1 Genbank gene 14625 15695 . + . ID=gene-HP17_06262;Name=HP17_06262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06262 AIHX01000009.1 Genbank CDS 14625 15695 . + 0 ID=cds-EIE30591.1;Parent=gene-HP17_06262;Dbxref=NCBI_GP:EIE30591.1;Name=EIE30591.1;Note=COG0582 Integrase;gbkey=CDS;locus_tag=HP17_06262;product=phage integrase family site specific recombinase;protein_id=EIE30591.1;transl_table=11 AIHX01000009.1 Genbank gene 15758 16264 . - . ID=gene-HP17_06267;Name=HP17_06267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06267 AIHX01000009.1 Genbank CDS 15758 16264 . - 0 ID=cds-EIE30592.1;Parent=gene-HP17_06267;Dbxref=NCBI_GP:EIE30592.1;Name=EIE30592.1;Note=COG0350 Methylated DNA-protein cysteine methyltransferase;gbkey=CDS;locus_tag=HP17_06267;product=methylated-DNA--protein-cysteine methyltransferase;protein_id=EIE30592.1;transl_table=11 AIHX01000009.1 Genbank gene 16268 17035 . - . ID=gene-HP17_06272;Name=HP17_06272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06272 AIHX01000009.1 Genbank CDS 16268 17035 . - 0 ID=cds-EIE30593.1;Parent=gene-HP17_06272;Dbxref=NCBI_GP:EIE30593.1;Name=EIE30593.1;Note=COG0730 Predicted permeases;gbkey=CDS;locus_tag=HP17_06272;product=Hypothetical protein;protein_id=EIE30593.1;transl_table=11 AIHX01000009.1 Genbank gene 17151 17561 . - . ID=gene-HP17_06277;Name=HP17_06277;end_range=17561,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06277;partial=true AIHX01000009.1 Genbank CDS 17151 17561 . - 0 ID=cds-EIE30594.1;Parent=gene-HP17_06277;Dbxref=NCBI_GP:EIE30594.1;Name=EIE30594.1;Note=COG0673 Predicted dehydrogenases and related proteins;end_range=17561,.;gbkey=CDS;locus_tag=HP17_06277;partial=true;product=putative lipopolysaccharide biosynthesis protein;protein_id=EIE30594.1;transl_table=11 ##sequence-region AIHX01000010.1 1 4997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000010.1 Genbank region 1 4997 . + . ID=AIHX01000010.1:1..4997;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000010.1 Genbank gene 1 504 . - . ID=gene-HP17_06282;Name=HP17_06282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06282;partial=true;start_range=.,1 AIHX01000010.1 Genbank CDS 1 504 . - 0 ID=cds-EIE30559.1;Parent=gene-HP17_06282;Dbxref=NCBI_GP:EIE30559.1;Name=EIE30559.1;Note=COG0673 Predicted dehydrogenases and related proteins;gbkey=CDS;locus_tag=HP17_06282;partial=true;product=oxidoreductase;protein_id=EIE30559.1;start_range=.,1;transl_table=11 AIHX01000010.1 Genbank gene 566 2932 . - . ID=gene-HP17_06287;Name=HP17_06287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06287 AIHX01000010.1 Genbank CDS 566 2932 . - 0 ID=cds-EIE30560.1;Parent=gene-HP17_06287;Dbxref=NCBI_GP:EIE30560.1;Name=EIE30560.1;Note=COG0209 Ribonucleotide reductase%2C alpha subunit;gbkey=CDS;locus_tag=HP17_06287;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=EIE30560.1;transl_table=11 AIHX01000010.1 Genbank gene 3098 3634 . - . ID=gene-HP17_06292;Name=HP17_06292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06292 AIHX01000010.1 Genbank CDS 3098 3634 . - 0 ID=cds-EIE30561.1;Parent=gene-HP17_06292;Dbxref=NCBI_GP:EIE30561.1;Name=EIE30561.1;gbkey=CDS;locus_tag=HP17_06292;product=Hypothetical protein;protein_id=EIE30561.1;transl_table=11 AIHX01000010.1 Genbank gene 3641 3976 . - . ID=gene-HP17_06297;Name=HP17_06297;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06297 AIHX01000010.1 Genbank CDS 3641 3976 . - 0 ID=cds-EIE30562.1;Parent=gene-HP17_06297;Dbxref=NCBI_GP:EIE30562.1;Name=EIE30562.1;gbkey=CDS;locus_tag=HP17_06297;product=Hypothetical protein;protein_id=EIE30562.1;transl_table=11 AIHX01000010.1 Genbank gene 4276 4758 . - . ID=gene-HP17_06302;Name=HP17_06302;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06302 AIHX01000010.1 Genbank CDS 4276 4758 . - 0 ID=cds-EIE30563.1;Parent=gene-HP17_06302;Dbxref=NCBI_GP:EIE30563.1;Name=EIE30563.1;gbkey=CDS;locus_tag=HP17_06302;product=Hypothetical protein;protein_id=EIE30563.1;transl_table=11 AIHX01000010.1 Genbank gene 4782 4997 . - . ID=gene-HP17_06307;Name=HP17_06307;end_range=4997,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06307;partial=true AIHX01000010.1 Genbank CDS 4782 4997 . - 0 ID=cds-EIE30564.1;Parent=gene-HP17_06307;Dbxref=NCBI_GP:EIE30564.1;Name=EIE30564.1;end_range=4997,.;gbkey=CDS;locus_tag=HP17_06307;partial=true;product=Hypothetical protein;protein_id=EIE30564.1;transl_table=11 ##sequence-region AIHX01000011.1 1 4669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000011.1 Genbank region 1 4669 . + . ID=AIHX01000011.1:1..4669;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000011.1 Genbank gene 87 1388 . - . ID=gene-HP17_06312;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HP17_06312 AIHX01000011.1 Genbank CDS 87 1388 . - 0 ID=cds-EIE30556.1;Parent=gene-HP17_06312;Dbxref=NCBI_GP:EIE30556.1;Name=EIE30556.1;Note=COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains);gbkey=CDS;gene=glmU;locus_tag=HP17_06312;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=EIE30556.1;transl_table=11 AIHX01000011.1 Genbank gene 1470 2216 . + . ID=gene-HP17_06317;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=HP17_06317 AIHX01000011.1 Genbank CDS 1470 2216 . + 0 ID=cds-EIE30557.1;Parent=gene-HP17_06317;Dbxref=NCBI_GP:EIE30557.1;Name=EIE30557.1;Note=COG1338 Flagellar biosynthesis pathway%2C component FliP;gbkey=CDS;gene=fliP;locus_tag=HP17_06317;product=flagellar biosynthesis protein FliP;protein_id=EIE30557.1;transl_table=11 AIHX01000011.1 Genbank pseudogene 2256 4558 . - . ID=gene-HP17_06322;Name=HP17_06322;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06322;pseudo=true AIHX01000011.1 Genbank sequence_feature 2256 4558 . - . ID=id-HP17_06322;Note=potential frameshift: common BLAST hit: gi|254779330|ref|YP_003057435.1| Iron(III) dicitrate transport protein FecA%3B signal peptide;gbkey=misc_feature;locus_tag=HP17_06322;pseudo=true ##sequence-region AIHX01000012.1 1 335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000012.1 Genbank region 1 335 . + . ID=AIHX01000012.1:1..335;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000012.1 Genbank gene 1 335 . - . ID=gene-HP17_00486;Name=HP17_00486;end_range=335,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00486;partial=true;start_range=.,1 AIHX01000012.1 Genbank CDS 1 335 . - 1 ID=cds-EIE30535.1;Parent=gene-HP17_00486;Dbxref=NCBI_GP:EIE30535.1;Name=EIE30535.1;Note=COG0439 Biotin carboxylase;end_range=335,.;gbkey=CDS;locus_tag=HP17_00486;partial=true;product=biotin carboxylase;protein_id=EIE30535.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000013.1 1 7714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000013.1 Genbank region 1 7714 . + . ID=AIHX01000013.1:1..7714;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000013.1 Genbank gene 1 1899 . - . ID=gene-HP17_06332;Name=HP17_06332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06332;partial=true;start_range=.,1 AIHX01000013.1 Genbank CDS 1 1899 . - 0 ID=cds-EIE30527.1;Parent=gene-HP17_06332;Dbxref=NCBI_GP:EIE30527.1;Name=EIE30527.1;Note=COG0370 Fe2+ transport system protein B;gbkey=CDS;locus_tag=HP17_06332;partial=true;product=ferrous iron transport protein B;protein_id=EIE30527.1;start_range=.,1;transl_table=11 AIHX01000013.1 Genbank gene 2031 2843 . + . ID=gene-HP17_06337;Name=HP17_06337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06337 AIHX01000013.1 Genbank CDS 2031 2843 . + 0 ID=cds-EIE30528.1;Parent=gene-HP17_06337;Dbxref=NCBI_GP:EIE30528.1;Name=EIE30528.1;Note=COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB;gbkey=CDS;locus_tag=HP17_06337;product=Hypothetical protein;protein_id=EIE30528.1;transl_table=11 AIHX01000013.1 Genbank gene 2898 4112 . + . ID=gene-HP17_06342;Name=HP17_06342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06342 AIHX01000013.1 Genbank CDS 2898 4112 . + 0 ID=cds-EIE30529.1;Parent=gene-HP17_06342;Dbxref=NCBI_GP:EIE30529.1;Name=EIE30529.1;Note=COG0863 DNA modification methylase;gbkey=CDS;locus_tag=HP17_06342;product=putative type II cytosine specific methyltransferase;protein_id=EIE30529.1;transl_table=11 AIHX01000013.1 Genbank gene 4115 4987 . + . ID=gene-HP17_06347;Name=HP17_06347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06347 AIHX01000013.1 Genbank CDS 4115 4987 . + 0 ID=cds-EIE30530.1;Parent=gene-HP17_06347;Dbxref=NCBI_GP:EIE30530.1;Name=EIE30530.1;gbkey=CDS;locus_tag=HP17_06347;product=putative type II restriction enzyme;protein_id=EIE30530.1;transl_table=11 AIHX01000013.1 Genbank gene 5079 5480 . + . ID=gene-HP17_06352;Name=HP17_06352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06352 AIHX01000013.1 Genbank CDS 5079 5480 . + 0 ID=cds-EIE30531.1;Parent=gene-HP17_06352;Dbxref=NCBI_GP:EIE30531.1;Name=EIE30531.1;Note=COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB;gbkey=CDS;locus_tag=HP17_06352;product=Hypothetical protein;protein_id=EIE30531.1;transl_table=11 AIHX01000013.1 Genbank gene 5762 6937 . + . ID=gene-HP17_06357;Name=HP17_06357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06357 AIHX01000013.1 Genbank CDS 5762 6937 . + 0 ID=cds-EIE30532.1;Parent=gene-HP17_06357;Dbxref=NCBI_GP:EIE30532.1;Name=EIE30532.1;Note=COG0183 Acetyl-CoA acetyltransferase;gbkey=CDS;locus_tag=HP17_06357;product=acetyl-CoA acetyltransferase;protein_id=EIE30532.1;transl_table=11 AIHX01000013.1 Genbank gene 6948 7646 . + . ID=gene-HP17_06362;Name=HP17_06362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06362 AIHX01000013.1 Genbank CDS 6948 7646 . + 0 ID=cds-EIE30533.1;Parent=gene-HP17_06362;Dbxref=NCBI_GP:EIE30533.1;Name=EIE30533.1;Note=COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase%2C alpha subunit;gbkey=CDS;locus_tag=HP17_06362;product=succinyl-CoA-transferase subunit A;protein_id=EIE30533.1;transl_table=11 AIHX01000013.1 Genbank gene 7643 7714 . + . ID=gene-HP17_06367;Name=HP17_06367;end_range=7714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06367;partial=true AIHX01000013.1 Genbank CDS 7643 7714 . + 0 ID=cds-EIE30534.1;Parent=gene-HP17_06367;Dbxref=NCBI_GP:EIE30534.1;Name=EIE30534.1;end_range=7714,.;gbkey=CDS;locus_tag=HP17_06367;partial=true;product=Hypothetical protein;protein_id=EIE30534.1;transl_table=11 ##sequence-region AIHX01000014.1 1 1499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000014.1 Genbank region 1 1499 . + . ID=AIHX01000014.1:1..1499;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000014.1 Genbank gene 1 515 . + . ID=gene-HP17_06372;Name=HP17_06372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06372;partial=true;start_range=.,1 AIHX01000014.1 Genbank CDS 1 515 . + 2 ID=cds-EIE30512.1;Parent=gene-HP17_06372;Dbxref=NCBI_GP:EIE30512.1;Name=EIE30512.1;Note=COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase%2C beta subunit;gbkey=CDS;locus_tag=HP17_06372;partial=true;product=succinyl-CoA-transferase subunit B;protein_id=EIE30512.1;start_range=.,1;transl_table=11 AIHX01000014.1 Genbank gene 535 1499 . + . ID=gene-HP17_06377;Name=HP17_06377;end_range=1499,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06377;partial=true AIHX01000014.1 Genbank CDS 535 1499 . + 0 ID=cds-EIE30513.1;Parent=gene-HP17_06377;Dbxref=NCBI_GP:EIE30513.1;Name=EIE30513.1;Note=COG2031 Short chain fatty acids transporter;end_range=1499,.;gbkey=CDS;locus_tag=HP17_06377;partial=true;product=short-chain fatty acids transporter;protein_id=EIE30513.1;transl_table=11 ##sequence-region AIHX01000015.1 1 5530 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000015.1 Genbank region 1 5530 . + . ID=AIHX01000015.1:1..5530;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000015.1 Genbank gene 1 361 . + . ID=gene-HP17_06382;Name=HP17_06382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06382;partial=true;start_range=.,1 AIHX01000015.1 Genbank CDS 1 361 . + 1 ID=cds-EIE30498.1;Parent=gene-HP17_06382;Dbxref=NCBI_GP:EIE30498.1;Name=EIE30498.1;Note=COG2031 Short chain fatty acids transporter;gbkey=CDS;locus_tag=HP17_06382;partial=true;product=short-chain fatty acids transporter;protein_id=EIE30498.1;start_range=.,1;transl_table=11 AIHX01000015.1 Genbank gene 489 1496 . + . ID=gene-HP17_06387;Name=HP17_06387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06387 AIHX01000015.1 Genbank CDS 489 1496 . + 0 ID=cds-EIE30499.1;Parent=gene-HP17_06387;Dbxref=NCBI_GP:EIE30499.1;Name=EIE30499.1;Note=COG3528 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_06387;product=outer membrane protein;protein_id=EIE30499.1;transl_table=11 AIHX01000015.1 Genbank gene 1741 3882 . + . ID=gene-HP17_06392;Name=HP17_06392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06392 AIHX01000015.1 Genbank CDS 1741 3882 . + 0 ID=cds-EIE30500.1;Parent=gene-HP17_06392;Dbxref=NCBI_GP:EIE30500.1;Name=EIE30500.1;Note=COG0145 N-methylhydantoinase A/acetone carboxylase%2C beta subunit;gbkey=CDS;locus_tag=HP17_06392;product=hydantoin utilization protein A;protein_id=EIE30500.1;transl_table=11 AIHX01000015.1 Genbank pseudogene 3894 5530 . + . ID=gene-HP17_06397;Name=HP17_06397;Note=nonfunctional due to framesift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06397;pseudo=true AIHX01000015.1 Genbank sequence_feature 3894 5530 . + . ID=id-HP17_06397;Note=potential frameshift: common BLAST hit: gi|208434610|ref|YP_002266276.1| N-methyl hydantoinase;gbkey=misc_feature;locus_tag=HP17_06397;pseudo=true ##sequence-region AIHX01000016.1 1 3237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000016.1 Genbank region 1 3237 . + . ID=AIHX01000016.1:1..3237;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000016.1 Genbank gene 1 636 . + . ID=gene-HP17_06407;Name=HP17_06407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06407;partial=true;start_range=.,1 AIHX01000016.1 Genbank CDS 1 636 . + 0 ID=cds-EIE30491.1;Parent=gene-HP17_06407;Dbxref=NCBI_GP:EIE30491.1;Name=EIE30491.1;Note=COG0146 N-methylhydantoinase B/acetone carboxylase%2C alpha subunit;gbkey=CDS;locus_tag=HP17_06407;partial=true;product=acetone carboxylase subunit alpha;protein_id=EIE30491.1;start_range=.,1;transl_table=11 AIHX01000016.1 Genbank gene 653 1153 . + . ID=gene-HP17_06412;Name=HP17_06412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06412 AIHX01000016.1 Genbank CDS 653 1153 . + 0 ID=cds-EIE30492.1;Parent=gene-HP17_06412;Dbxref=NCBI_GP:EIE30492.1;Name=EIE30492.1;Note=COG4647 Acetone carboxylase%2C gamma subunit;gbkey=CDS;locus_tag=HP17_06412;product=Hypothetical protein;protein_id=EIE30492.1;transl_table=11 AIHX01000016.1 Genbank gene 1483 2511 . + . ID=gene-HP17_06417;Name=HP17_06417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06417 AIHX01000016.1 Genbank CDS 1483 2511 . + 0 ID=cds-EIE30493.1;Parent=gene-HP17_06417;Dbxref=NCBI_GP:EIE30493.1;Name=EIE30493.1;gbkey=CDS;locus_tag=HP17_06417;product=Hypothetical protein;protein_id=EIE30493.1;transl_table=11 AIHX01000016.1 Genbank gene 2504 2890 . + . ID=gene-HP17_06422;Name=HP17_06422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06422 AIHX01000016.1 Genbank CDS 2504 2890 . + 0 ID=cds-EIE30494.1;Parent=gene-HP17_06422;Dbxref=NCBI_GP:EIE30494.1;Name=EIE30494.1;Note=COG0818 Diacylglycerol kinase;gbkey=CDS;locus_tag=HP17_06422;product=diacylglycerol kinase;protein_id=EIE30494.1;transl_table=11 AIHX01000016.1 Genbank gene 2906 3237 . + . ID=gene-HP17_06427;Name=HP17_06427;end_range=3237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06427;partial=true AIHX01000016.1 Genbank CDS 2906 3237 . + 0 ID=cds-EIE30495.1;Parent=gene-HP17_06427;Dbxref=NCBI_GP:EIE30495.1;Name=EIE30495.1;Note=COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit;end_range=3237,.;gbkey=CDS;locus_tag=HP17_06427;partial=true;product=DNA gyrase subunit A;protein_id=EIE30495.1;transl_table=11 ##sequence-region AIHX01000017.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000017.1 Genbank region 1 320 . + . ID=AIHX01000017.1:1..320;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000017.1 Genbank gene 1 320 . + . ID=gene-HP17_06432;Name=HP17_06432;end_range=320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06432;partial=true;start_range=.,1 AIHX01000017.1 Genbank CDS 1 320 . + 0 ID=cds-EIE30486.1;Parent=gene-HP17_06432;Dbxref=NCBI_GP:EIE30486.1;Name=EIE30486.1;Note=COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit;end_range=320,.;gbkey=CDS;locus_tag=HP17_06432;partial=true;product=DNA gyrase subunit A;protein_id=EIE30486.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000018.1 1 8563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000018.1 Genbank region 1 8563 . + . ID=AIHX01000018.1:1..8563;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000018.1 Genbank gene 1 1770 . + . ID=gene-HP17_06437;Name=HP17_06437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06437;partial=true;start_range=.,1 AIHX01000018.1 Genbank CDS 1 1770 . + 0 ID=cds-EIE30477.1;Parent=gene-HP17_06437;Dbxref=NCBI_GP:EIE30477.1;Name=EIE30477.1;Note=COG0188 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C A subunit;gbkey=CDS;locus_tag=HP17_06437;partial=true;product=DNA gyrase subunit A;protein_id=EIE30477.1;start_range=.,1;transl_table=11 AIHX01000018.1 Genbank gene 1770 2243 . + . ID=gene-HP17_06442;Name=HP17_06442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06442 AIHX01000018.1 Genbank CDS 1770 2243 . + 0 ID=cds-EIE30478.1;Parent=gene-HP17_06442;Dbxref=NCBI_GP:EIE30478.1;Name=EIE30478.1;gbkey=CDS;locus_tag=HP17_06442;product=Hypothetical protein;protein_id=EIE30478.1;transl_table=11 AIHX01000018.1 Genbank gene 2240 3385 . + . ID=gene-HP17_06447;Name=HP17_06447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06447 AIHX01000018.1 Genbank CDS 2240 3385 . + 0 ID=cds-EIE30479.1;Parent=gene-HP17_06447;Dbxref=NCBI_GP:EIE30479.1;Name=EIE30479.1;Note=COG2204 Response regulator containing CheY-like receiver%2C AAA-type ATPase%2C and DNA-binding domains;gbkey=CDS;locus_tag=HP17_06447;product=transcriptional activator;protein_id=EIE30479.1;transl_table=11 AIHX01000018.1 Genbank pseudogene 3558 3817 . + . ID=gene-HP17_06452;Name=HP17_06452;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06452;pseudo=true AIHX01000018.1 Genbank sequence_feature 3558 3817 . + . ID=id-HP17_06452;Note=potential frameshift: common BLAST hit: gb|ACI27418.1|ref|YP_002266284.1| Hypothetical protein;gbkey=misc_feature;locus_tag=HP17_06452;pseudo=true AIHX01000018.1 Genbank gene 3917 4381 . + . ID=gene-HP17_06462;Name=HP17_06462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06462 AIHX01000018.1 Genbank CDS 3917 4381 . + 0 ID=cds-EIE30480.1;Parent=gene-HP17_06462;Dbxref=NCBI_GP:EIE30480.1;Name=EIE30480.1;gbkey=CDS;locus_tag=HP17_06462;product=Hypothetical protein;protein_id=EIE30480.1;transl_table=11 AIHX01000018.1 Genbank gene 5055 7880 . - . ID=gene-HP17_06467;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=HP17_06467 AIHX01000018.1 Genbank CDS 5055 7880 . - 0 ID=cds-EIE30481.1;Parent=gene-HP17_06467;Dbxref=NCBI_GP:EIE30481.1;Name=EIE30481.1;Note=COG0178 Excinuclease ATPase subunit;gbkey=CDS;gene=uvrA;locus_tag=HP17_06467;product=excinuclease ABC subunit A;protein_id=EIE30481.1;transl_table=11 AIHX01000018.1 Genbank gene 8054 8563 . + . ID=gene-HP17_06472;Name=HP17_06472;end_range=8563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06472;partial=true AIHX01000018.1 Genbank CDS 8054 8563 . + 0 ID=cds-EIE30482.1;Parent=gene-HP17_06472;Dbxref=NCBI_GP:EIE30482.1;Name=EIE30482.1;end_range=8563,.;gbkey=CDS;locus_tag=HP17_06472;partial=true;product=outer membrane protein HopE;protein_id=EIE30482.1;transl_table=11 ##sequence-region AIHX01000019.1 1 8859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000019.1 Genbank region 1 8859 . + . ID=AIHX01000019.1:1..8859;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000019.1 Genbank gene 1 300 . + . ID=gene-HP17_06477;Name=HP17_06477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06477;partial=true;start_range=.,1 AIHX01000019.1 Genbank CDS 1 300 . + 0 ID=cds-EIE30460.1;Parent=gene-HP17_06477;Dbxref=NCBI_GP:EIE30460.1;Name=EIE30460.1;gbkey=CDS;locus_tag=HP17_06477;partial=true;product=putative outer membrane protein;protein_id=EIE30460.1;start_range=.,1;transl_table=11 AIHX01000019.1 Genbank gene 475 1401 . + . ID=gene-HP17_06482;Name=HP17_06482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06482 AIHX01000019.1 Genbank CDS 475 1401 . + 0 ID=cds-EIE30461.1;Parent=gene-HP17_06482;Dbxref=NCBI_GP:EIE30461.1;Name=EIE30461.1;Note=COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis;gbkey=CDS;locus_tag=HP17_06482;product=16S rRNA methyltransferase;protein_id=EIE30461.1;transl_table=11 AIHX01000019.1 Genbank gene 1422 1766 . + . ID=gene-HP17_06487;Name=HP17_06487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06487 AIHX01000019.1 Genbank CDS 1422 1766 . + 0 ID=cds-EIE30462.1;Parent=gene-HP17_06487;Dbxref=NCBI_GP:EIE30462.1;Name=EIE30462.1;gbkey=CDS;locus_tag=HP17_06487;product=Hypothetical protein;protein_id=EIE30462.1;transl_table=11 AIHX01000019.1 Genbank gene 1974 2876 . + . ID=gene-HP17_06492;Name=HP17_06492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06492 AIHX01000019.1 Genbank CDS 1974 2876 . + 0 ID=cds-EIE30463.1;Parent=gene-HP17_06492;Dbxref=NCBI_GP:EIE30463.1;Name=EIE30463.1;Note=COG1912 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_06492;product=Hypothetical protein;protein_id=EIE30463.1;transl_table=11 AIHX01000019.1 Genbank gene 3148 4689 . + . ID=gene-HP17_06497;Name=HP17_06497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06497 AIHX01000019.1 Genbank CDS 3148 4689 . + 0 ID=cds-EIE30464.1;Parent=gene-HP17_06497;Dbxref=NCBI_GP:EIE30464.1;Name=EIE30464.1;gbkey=CDS;locus_tag=HP17_06497;product=putative outer membrane protein HomB;protein_id=EIE30464.1;transl_table=11 AIHX01000019.1 Genbank gene 4790 5131 . + . ID=gene-HP17_06502;Name=HP17_06502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06502 AIHX01000019.1 Genbank CDS 4790 5131 . + 0 ID=cds-EIE30465.1;Parent=gene-HP17_06502;Dbxref=NCBI_GP:EIE30465.1;Name=EIE30465.1;gbkey=CDS;locus_tag=HP17_06502;product=outer membrane protein;protein_id=EIE30465.1;transl_table=11 AIHX01000019.1 Genbank gene 5320 6540 . + . ID=gene-HP17_06507;Name=HP17_06507;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06507 AIHX01000019.1 Genbank CDS 5320 6540 . + 0 ID=cds-EIE30466.1;Parent=gene-HP17_06507;Dbxref=NCBI_GP:EIE30466.1;Name=EIE30466.1;Note=COG1896 Predicted hydrolases of HD superfamily;gbkey=CDS;locus_tag=HP17_06507;product=Hypothetical protein;protein_id=EIE30466.1;transl_table=11 AIHX01000019.1 Genbank gene 7257 8501 . - . ID=gene-HP17_06522;Name=HP17_06522;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06522 AIHX01000019.1 Genbank CDS 7257 8501 . - 0 ID=cds-EIE30467.1;Parent=gene-HP17_06522;Dbxref=NCBI_GP:EIE30467.1;Name=EIE30467.1;Note=COG1508 DNA-directed RNA polymerase specialized sigma subunit%2C sigma54 homolog;gbkey=CDS;locus_tag=HP17_06522;product=RNA polymerase factor sigma-54;protein_id=EIE30467.1;transl_table=11 AIHX01000019.1 Genbank gene 8504 8859 . - . ID=gene-HP17_06527;Name=HP17_06527;end_range=8859,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06527;partial=true AIHX01000019.1 Genbank CDS 8504 8859 . - 2 ID=cds-EIE30468.1;Parent=gene-HP17_06527;Dbxref=NCBI_GP:EIE30468.1;Name=EIE30468.1;Note=COG1137 ABC-type (unclassified) transport system%2C ATPase component;end_range=8859,.;gbkey=CDS;locus_tag=HP17_06527;partial=true;product=ABC-type transport system%2C ATP binding protein;protein_id=EIE30468.1;transl_table=11 ##sequence-region AIHX01000020.1 1 390 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000020.1 Genbank region 1 390 . + . ID=AIHX01000020.1:1..390;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000020.1 Genbank gene 1 348 . - . ID=gene-HP17_06532;Name=HP17_06532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06532;partial=true;start_range=.,1 AIHX01000020.1 Genbank CDS 1 348 . - 0 ID=cds-EIE30457.1;Parent=gene-HP17_06532;Dbxref=NCBI_GP:EIE30457.1;Name=EIE30457.1;Note=COG1137 ABC-type (unclassified) transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_06532;partial=true;product=ABC-type transport system%2C ATP binding protein;protein_id=EIE30457.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000021.1 1 2316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000021.1 Genbank region 1 2316 . + . ID=AIHX01000021.1:1..2316;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000021.1 Genbank gene 1 356 . - . ID=gene-HP17_06537;Name=HP17_06537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06537;partial=true;start_range=.,1 AIHX01000021.1 Genbank CDS 1 356 . - 0 ID=cds-EIE30450.1;Parent=gene-HP17_06537;Dbxref=NCBI_GP:EIE30450.1;Name=EIE30450.1;Note=COG0802 Predicted ATPase or kinase;gbkey=CDS;locus_tag=HP17_06537;partial=true;product=Hypothetical protein;protein_id=EIE30450.1;start_range=.,1;transl_table=11 AIHX01000021.1 Genbank gene 353 2104 . - . ID=gene-HP17_06542;Name=HP17_06542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06542 AIHX01000021.1 Genbank CDS 353 2104 . - 0 ID=cds-EIE30451.1;Parent=gene-HP17_06542;Dbxref=NCBI_GP:EIE30451.1;Name=EIE30451.1;Note=COG2812 DNA polymerase III%2C gamma/tau subunits;gbkey=CDS;locus_tag=HP17_06542;product=DNA polymerase III subunits gamma and tau;protein_id=EIE30451.1;transl_table=11 AIHX01000021.1 Genbank gene 2173 2316 . - . ID=gene-HP17_06547;Name=HP17_06547;end_range=2316,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06547;partial=true AIHX01000021.1 Genbank CDS 2173 2316 . - 0 ID=cds-EIE30452.1;Parent=gene-HP17_06547;Dbxref=NCBI_GP:EIE30452.1;Name=EIE30452.1;end_range=2316,.;gbkey=CDS;locus_tag=HP17_06547;partial=true;product=Hypothetical protein;protein_id=EIE30452.1;transl_table=11 ##sequence-region AIHX01000022.1 1 1783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000022.1 Genbank region 1 1783 . + . ID=AIHX01000022.1:1..1783;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000022.1 Genbank gene 1 436 . - . ID=gene-HP17_06552;Name=HP17_06552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06552;partial=true;start_range=.,1 AIHX01000022.1 Genbank CDS 1 436 . - 0 ID=cds-EIE30445.1;Parent=gene-HP17_06552;Dbxref=NCBI_GP:EIE30445.1;Name=EIE30445.1;Note=COG1279 Lysine efflux permease;gbkey=CDS;locus_tag=HP17_06552;partial=true;product=Hypothetical protein;protein_id=EIE30445.1;start_range=.,1;transl_table=11 AIHX01000022.1 Genbank gene 696 1118 . + . ID=gene-HP17_06557;Name=HP17_06557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06557 AIHX01000022.1 Genbank CDS 696 1118 . + 0 ID=cds-EIE30446.1;Parent=gene-HP17_06557;Dbxref=NCBI_GP:EIE30446.1;Name=EIE30446.1;gbkey=CDS;locus_tag=HP17_06557;product=Hypothetical protein;protein_id=EIE30446.1;transl_table=11 AIHX01000022.1 Genbank gene 1147 1608 . + . ID=gene-HP17_06562;Name=HP17_06562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06562 AIHX01000022.1 Genbank CDS 1147 1608 . + 0 ID=cds-EIE30447.1;Parent=gene-HP17_06562;Dbxref=NCBI_GP:EIE30447.1;Name=EIE30447.1;gbkey=CDS;locus_tag=HP17_06562;product=Hypothetical protein;protein_id=EIE30447.1;transl_table=11 ##sequence-region AIHX01000023.1 1 9627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000023.1 Genbank region 1 9627 . + . ID=AIHX01000023.1:1..9627;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000023.1 Genbank gene 40 522 . - . ID=gene-HP17_00491;Name=HP17_00491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00491 AIHX01000023.1 Genbank CDS 40 522 . - 0 ID=cds-EIE30430.1;Parent=gene-HP17_00491;Dbxref=NCBI_GP:EIE30430.1;Name=EIE30430.1;Note=COG0511 Biotin carboxyl carrier protein;gbkey=CDS;locus_tag=HP17_00491;product=biotin carboxyl carrier protein;protein_id=EIE30430.1;transl_table=11 AIHX01000023.1 Genbank gene 652 1218 . + . ID=gene-HP17_00496;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HP17_00496 AIHX01000023.1 Genbank CDS 652 1218 . + 0 ID=cds-EIE30431.1;Parent=gene-HP17_00496;Dbxref=NCBI_GP:EIE30431.1;Name=EIE30431.1;Note=COG0717 Deoxycytidine deaminase;gbkey=CDS;gene=dcd;locus_tag=HP17_00496;product=deoxycytidine triphosphate deaminase;protein_id=EIE30431.1;transl_table=11 AIHX01000023.1 Genbank gene 1378 3486 . + . ID=gene-HP17_00501;Name=HP17_00501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00501 AIHX01000023.1 Genbank CDS 1378 3486 . + 0 ID=cds-EIE30432.1;Parent=gene-HP17_00501;Dbxref=NCBI_GP:EIE30432.1;Name=EIE30432.1;gbkey=CDS;locus_tag=HP17_00501;product=Hypothetical protein;protein_id=EIE30432.1;transl_table=11 AIHX01000023.1 Genbank gene 3579 4259 . - . ID=gene-HP17_00506;Name=HP17_00506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00506 AIHX01000023.1 Genbank CDS 3579 4259 . - 0 ID=cds-EIE30433.1;Parent=gene-HP17_00506;Dbxref=NCBI_GP:EIE30433.1;Name=EIE30433.1;Note=COG1385 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_00506;product=16S ribosomal RNA methyltransferase RsmE;protein_id=EIE30433.1;transl_table=11 AIHX01000023.1 Genbank gene 4260 4691 . - . ID=gene-HP17_00511;Name=HP17_00511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00511 AIHX01000023.1 Genbank CDS 4260 4691 . - 0 ID=cds-EIE30434.1;Parent=gene-HP17_00511;Dbxref=NCBI_GP:EIE30434.1;Name=EIE30434.1;gbkey=CDS;locus_tag=HP17_00511;product=Hypothetical protein;protein_id=EIE30434.1;transl_table=11 AIHX01000023.1 Genbank gene 4747 5751 . + . ID=gene-HP17_00516;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=HP17_00516 AIHX01000023.1 Genbank CDS 4747 5751 . + 0 ID=cds-EIE30435.1;Parent=gene-HP17_00516;Dbxref=NCBI_GP:EIE30435.1;Name=EIE30435.1;Note=COG0276 Protoheme ferro-lyase (ferrochelatase);gbkey=CDS;gene=hemH;locus_tag=HP17_00516;product=ferrochelatase;protein_id=EIE30435.1;transl_table=11 AIHX01000023.1 Genbank gene 5828 6499 . + . ID=gene-HP17_00521;Name=HP17_00521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00521 AIHX01000023.1 Genbank CDS 5828 6499 . + 0 ID=cds-EIE30436.1;Parent=gene-HP17_00521;Dbxref=NCBI_GP:EIE30436.1;Name=EIE30436.1;Note=COG2143 Thioredoxin-related protein;gbkey=CDS;locus_tag=HP17_00521;product=thiol:disulfide interchange protein;protein_id=EIE30436.1;transl_table=11 AIHX01000023.1 Genbank gene 6508 9318 . + . ID=gene-HP17_00526;Name=HP17_00526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00526 AIHX01000023.1 Genbank CDS 6508 9318 . + 0 ID=cds-EIE30437.1;Parent=gene-HP17_00526;Dbxref=NCBI_GP:EIE30437.1;Name=EIE30437.1;Note=COG1333 ResB protein required for cytochrome c biosynthesis;gbkey=CDS;locus_tag=HP17_00526;product=cytochrome C-type biogenesis protein;protein_id=EIE30437.1;transl_table=11 AIHX01000023.1 Genbank gene 9328 9627 . + . ID=gene-HP17_00531;Name=HP17_00531;end_range=9627,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00531;partial=true AIHX01000023.1 Genbank CDS 9328 9627 . + 0 ID=cds-EIE30438.1;Parent=gene-HP17_00531;Dbxref=NCBI_GP:EIE30438.1;Name=EIE30438.1;end_range=9627,.;gbkey=CDS;locus_tag=HP17_00531;partial=true;product=Alpha1%2C3-fucosyltransferase;protein_id=EIE30438.1;transl_table=11 ##sequence-region AIHX01000024.1 1 2794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000024.1 Genbank region 1 2794 . + . ID=AIHX01000024.1:1..2794;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000024.1 Genbank gene 1 1847 . + . ID=gene-HP17_06567;Name=HP17_06567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06567;partial=true;start_range=.,1 AIHX01000024.1 Genbank CDS 1 1847 . + 2 ID=cds-EIE30410.1;Parent=gene-HP17_06567;Dbxref=NCBI_GP:EIE30410.1;Name=EIE30410.1;gbkey=CDS;locus_tag=HP17_06567;partial=true;product=outer membrane protein SabA;protein_id=EIE30410.1;start_range=.,1;transl_table=11 AIHX01000024.1 Genbank gene 1921 2793 . - . ID=gene-HP17_06572;Name=HP17_06572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06572 AIHX01000024.1 Genbank CDS 1921 2793 . - 0 ID=cds-EIE30411.1;Parent=gene-HP17_06572;Dbxref=NCBI_GP:EIE30411.1;Name=EIE30411.1;Note=COG2704 Anaerobic C4-dicarboxylate transporter;gbkey=CDS;locus_tag=HP17_06572;product=anaerobic C4-dicarboxylate transporter;protein_id=EIE30411.1;transl_table=11 ##sequence-region AIHX01000025.1 1 1777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000025.1 Genbank region 1 1777 . + . ID=AIHX01000025.1:1..1777;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000025.1 Genbank gene 1 430 . - . ID=gene-HP17_06577;Name=HP17_06577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06577;partial=true;start_range=.,1 AIHX01000025.1 Genbank CDS 1 430 . - 0 ID=cds-EIE30408.1;Parent=gene-HP17_06577;Dbxref=NCBI_GP:EIE30408.1;Name=EIE30408.1;Note=COG2704 Anaerobic C4-dicarboxylate transporter;gbkey=CDS;locus_tag=HP17_06577;partial=true;product=anaerobic C4-dicarboxylate transporter;protein_id=EIE30408.1;start_range=.,1;transl_table=11 AIHX01000025.1 Genbank gene 559 1551 . + . ID=gene-HP17_06582;Name=HP17_06582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06582 AIHX01000025.1 Genbank CDS 559 1551 . + 0 ID=cds-EIE30409.1;Parent=gene-HP17_06582;Dbxref=NCBI_GP:EIE30409.1;Name=EIE30409.1;Note=COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D;gbkey=CDS;locus_tag=HP17_06582;product=L-asparaginase II;protein_id=EIE30409.1;transl_table=11 ##sequence-region AIHX01000026.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000026.1 Genbank region 1 255 . + . ID=AIHX01000026.1:1..255;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000026.1 Genbank gene 1 159 . + . ID=gene-HP17_06587;Name=HP17_06587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06587;partial=true;start_range=.,1 AIHX01000026.1 Genbank CDS 1 159 . + 0 ID=cds-EIE30381.1;Parent=gene-HP17_06587;Dbxref=NCBI_GP:EIE30381.1;Name=EIE30381.1;gbkey=CDS;locus_tag=HP17_06587;partial=true;product=Hypothetical protein;protein_id=EIE30381.1;start_range=.,1;transl_table=11 AIHX01000026.1 Genbank gene 169 255 . + . ID=gene-HP17_06592;Name=lysS;end_range=255,.;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=HP17_06592;partial=true AIHX01000026.1 Genbank CDS 169 255 . + 0 ID=cds-EIE30382.1;Parent=gene-HP17_06592;Dbxref=NCBI_GP:EIE30382.1;Name=EIE30382.1;end_range=255,.;gbkey=CDS;gene=lysS;locus_tag=HP17_06592;partial=true;product=lysyl-tRNA synthetase;protein_id=EIE30382.1;transl_table=11 ##sequence-region AIHX01000027.1 1 15793 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000027.1 Genbank region 1 15793 . + . ID=AIHX01000027.1:1..15793;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000027.1 Genbank gene 1 1371 . + . ID=gene-HP17_06597;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=HP17_06597;partial=true;start_range=.,1 AIHX01000027.1 Genbank CDS 1 1371 . + 0 ID=cds-EIE30368.1;Parent=gene-HP17_06597;Dbxref=NCBI_GP:EIE30368.1;Name=EIE30368.1;Note=COG1190 Lysyl-tRNA synthetase (class II);gbkey=CDS;gene=lysS;locus_tag=HP17_06597;partial=true;product=lysyl-tRNA synthetase;protein_id=EIE30368.1;start_range=.,1;transl_table=11 AIHX01000027.1 Genbank gene 1371 2621 . + . ID=gene-HP17_06602;Name=HP17_06602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06602 AIHX01000027.1 Genbank CDS 1371 2621 . + 0 ID=cds-EIE30369.1;Parent=gene-HP17_06602;Dbxref=NCBI_GP:EIE30369.1;Name=EIE30369.1;Note=COG0112 Glycine/serine hydroxymethyltransferase;gbkey=CDS;locus_tag=HP17_06602;product=serine hydroxymethyltransferase;protein_id=EIE30369.1;transl_table=11 AIHX01000027.1 Genbank gene 2632 3174 . + . ID=gene-HP17_06607;Name=HP17_06607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06607 AIHX01000027.1 Genbank CDS 2632 3174 . + 0 ID=cds-EIE30370.1;Parent=gene-HP17_06607;Dbxref=NCBI_GP:EIE30370.1;Name=EIE30370.1;gbkey=CDS;locus_tag=HP17_06607;product=Hypothetical protein;protein_id=EIE30370.1;transl_table=11 AIHX01000027.1 Genbank gene 3196 4005 . + . ID=gene-HP17_06612;Name=HP17_06612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06612 AIHX01000027.1 Genbank CDS 3196 4005 . + 0 ID=cds-EIE30371.1;Parent=gene-HP17_06612;Dbxref=NCBI_GP:EIE30371.1;Name=EIE30371.1;gbkey=CDS;locus_tag=HP17_06612;product=Hypothetical protein;protein_id=EIE30371.1;transl_table=11 AIHX01000027.1 Genbank gene 6247 6780 . + . ID=gene-HP17_06627;Name=HP17_06627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06627 AIHX01000027.1 Genbank CDS 6247 6780 . + 0 ID=cds-EIE30372.1;Parent=gene-HP17_06627;Dbxref=NCBI_GP:EIE30372.1;Name=EIE30372.1;Note=COG2862 Predicted membrane protein;gbkey=CDS;locus_tag=HP17_06627;product=Hypothetical protein;protein_id=EIE30372.1;transl_table=11 AIHX01000027.1 Genbank gene 6786 8294 . - . ID=gene-HP17_06632;Name=HP17_06632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06632 AIHX01000027.1 Genbank CDS 6786 8294 . - 0 ID=cds-EIE30373.1;Parent=gene-HP17_06632;Dbxref=NCBI_GP:EIE30373.1;Name=EIE30373.1;Note=COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes;gbkey=CDS;locus_tag=HP17_06632;product=phospholipase D-family protein;protein_id=EIE30373.1;transl_table=11 AIHX01000027.1 Genbank gene 8316 9053 . - . ID=gene-HP17_06637;Name=frdB;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=HP17_06637 AIHX01000027.1 Genbank CDS 8316 9053 . - 0 ID=cds-EIE30374.1;Parent=gene-HP17_06637;Dbxref=NCBI_GP:EIE30374.1;Name=EIE30374.1;Note=COG0479 Succinate dehydrogenase/fumarate reductase%2C Fe-S protein subunit;gbkey=CDS;gene=frdB;locus_tag=HP17_06637;product=fumarate reductase iron-sulfur subunit;protein_id=EIE30374.1;transl_table=11 AIHX01000027.1 Genbank gene 9046 11190 . - . ID=gene-HP17_06642;Name=HP17_06642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06642 AIHX01000027.1 Genbank CDS 9046 11190 . - 0 ID=cds-EIE30375.1;Parent=gene-HP17_06642;Dbxref=NCBI_GP:EIE30375.1;Name=EIE30375.1;Note=COG1053 Succinate dehydrogenase/fumarate reductase%2C flavoprotein subunit;gbkey=CDS;locus_tag=HP17_06642;product=fumarate reductase flavoprotein subunit;protein_id=EIE30375.1;transl_table=11 AIHX01000027.1 Genbank gene 11200 11967 . - . ID=gene-HP17_06647;Name=HP17_06647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06647 AIHX01000027.1 Genbank CDS 11200 11967 . - 0 ID=cds-EIE30376.1;Parent=gene-HP17_06647;Dbxref=NCBI_GP:EIE30376.1;Name=EIE30376.1;Note=COG2009 Succinate dehydrogenase/fumarate reductase%2C cytochrome b subunit;gbkey=CDS;locus_tag=HP17_06647;product=fumarate reductase cytochrome b-556 subunit;protein_id=EIE30376.1;transl_table=11 AIHX01000027.1 Genbank gene 12182 12886 . + . ID=gene-HP17_06652;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=HP17_06652 AIHX01000027.1 Genbank CDS 12182 12886 . + 0 ID=cds-EIE30377.1;Parent=gene-HP17_06652;Dbxref=NCBI_GP:EIE30377.1;Name=EIE30377.1;Note=COG0149 Triosephosphate isomerase;gbkey=CDS;gene=tpiA;locus_tag=HP17_06652;product=triosephosphate isomerase;protein_id=EIE30377.1;transl_table=11 AIHX01000027.1 Genbank gene 12896 13729 . + . ID=gene-HP17_06657;Name=HP17_06657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06657 AIHX01000027.1 Genbank CDS 12896 13729 . + 0 ID=cds-EIE30378.1;Parent=gene-HP17_06657;Dbxref=NCBI_GP:EIE30378.1;Name=EIE30378.1;Note=COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH);gbkey=CDS;locus_tag=HP17_06657;product=enoyl-(acyl carrier protein) reductase;protein_id=EIE30378.1;transl_table=11 AIHX01000027.1 Genbank gene 13729 14739 . + . ID=gene-HP17_06662;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=HP17_06662 AIHX01000027.1 Genbank CDS 13729 14739 . + 0 ID=cds-EIE30379.1;Parent=gene-HP17_06662;Dbxref=NCBI_GP:EIE30379.1;Name=EIE30379.1;Note=COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;gbkey=CDS;gene=lpxD;locus_tag=HP17_06662;product=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=EIE30379.1;transl_table=11 AIHX01000027.1 Genbank gene 14953 15793 . + . ID=gene-HP17_06667;Name=HP17_06667;end_range=15793,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06667;partial=true AIHX01000027.1 Genbank CDS 14953 15793 . + 0 ID=cds-EIE30380.1;Parent=gene-HP17_06667;Dbxref=NCBI_GP:EIE30380.1;Name=EIE30380.1;Note=COG0192 S-adenosylmethionine synthetase;end_range=15793,.;gbkey=CDS;locus_tag=HP17_06667;partial=true;product=S-adenosylmethionine synthetase;protein_id=EIE30380.1;transl_table=11 ##sequence-region AIHX01000028.1 1 25614 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000028.1 Genbank region 1 25614 . + . ID=AIHX01000028.1:1..25614;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000028.1 Genbank gene 1 306 . + . ID=gene-HP17_06672;Name=HP17_06672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06672;partial=true;start_range=.,1 AIHX01000028.1 Genbank CDS 1 306 . + 0 ID=cds-EIE30334.1;Parent=gene-HP17_06672;Dbxref=NCBI_GP:EIE30334.1;Name=EIE30334.1;Note=COG0192 S-adenosylmethionine synthetase;gbkey=CDS;locus_tag=HP17_06672;partial=true;product=S-adenosylmethionine synthetase;protein_id=EIE30334.1;start_range=.,1;transl_table=11 AIHX01000028.1 Genbank gene 373 786 . + . ID=gene-HP17_06677;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=HP17_06677 AIHX01000028.1 Genbank CDS 373 786 . + 0 ID=cds-EIE30335.1;Parent=gene-HP17_06677;Dbxref=NCBI_GP:EIE30335.1;Name=EIE30335.1;Note=COG0105 Nucleoside diphosphate kinase;gbkey=CDS;gene=ndk;locus_tag=HP17_06677;product=mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase;protein_id=EIE30335.1;transl_table=11 AIHX01000028.1 Genbank gene 812 1168 . + . ID=gene-HP17_06682;Name=HP17_06682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06682 AIHX01000028.1 Genbank CDS 812 1168 . + 0 ID=cds-EIE30336.1;Parent=gene-HP17_06682;Dbxref=NCBI_GP:EIE30336.1;Name=EIE30336.1;gbkey=CDS;locus_tag=HP17_06682;product=Hypothetical protein;protein_id=EIE30336.1;transl_table=11 AIHX01000028.1 Genbank gene 1184 1330 . + . ID=gene-HP17_06687;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HP17_06687 AIHX01000028.1 Genbank CDS 1184 1330 . + 0 ID=cds-EIE30337.1;Parent=gene-HP17_06687;Dbxref=NCBI_GP:EIE30337.1;Name=EIE30337.1;Note=COG0333 Ribosomal protein L32;gbkey=CDS;gene=rpmF;locus_tag=HP17_06687;product=50S ribosomal protein L32;protein_id=EIE30337.1;transl_table=11 AIHX01000028.1 Genbank gene 1408 2427 . + . ID=gene-HP17_06692;Name=HP17_06692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06692 AIHX01000028.1 Genbank CDS 1408 2427 . + 0 ID=cds-EIE30338.1;Parent=gene-HP17_06692;Dbxref=NCBI_GP:EIE30338.1;Name=EIE30338.1;Note=COG0416 Fatty acid/phospholipid biosynthesis enzyme;gbkey=CDS;locus_tag=HP17_06692;product=putative phosphate acyltransferase;protein_id=EIE30338.1;transl_table=11 AIHX01000028.1 Genbank gene 2452 3444 . + . ID=gene-HP17_06697;Name=HP17_06697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06697 AIHX01000028.1 Genbank CDS 2452 3444 . + 0 ID=cds-EIE30339.1;Parent=gene-HP17_06697;Dbxref=NCBI_GP:EIE30339.1;Name=EIE30339.1;Note=COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III;gbkey=CDS;locus_tag=HP17_06697;product=3-oxoacyl-(acyl carrier protein) synthase III;protein_id=EIE30339.1;transl_table=11 AIHX01000028.1 Genbank gene 3464 3766 . + . ID=gene-HP17_06702;Name=HP17_06702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06702 AIHX01000028.1 Genbank CDS 3464 3766 . + 0 ID=cds-EIE30340.1;Parent=gene-HP17_06702;Dbxref=NCBI_GP:EIE30340.1;Name=EIE30340.1;gbkey=CDS;locus_tag=HP17_06702;product=Hypothetical protein;protein_id=EIE30340.1;transl_table=11 AIHX01000028.1 Genbank gene 4231 4614 . - . ID=gene-HP17_06707;Name=HP17_06707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06707 AIHX01000028.1 Genbank CDS 4231 4614 . - 0 ID=cds-EIE30341.1;Parent=gene-HP17_06707;Dbxref=NCBI_GP:EIE30341.1;Name=EIE30341.1;gbkey=CDS;locus_tag=HP17_06707;product=Hypothetical protein;protein_id=EIE30341.1;transl_table=11 AIHX01000028.1 Genbank gene 7628 8734 . + . ID=gene-HP17_06722;Name=HP17_06722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06722 AIHX01000028.1 Genbank CDS 7628 8734 . + 0 ID=cds-EIE30342.1;Parent=gene-HP17_06722;Dbxref=NCBI_GP:EIE30342.1;Name=EIE30342.1;Note=COG0489 ATPases involved in chromosome partitioning;gbkey=CDS;locus_tag=HP17_06722;product=ATP-binding protein (mpr);protein_id=EIE30342.1;transl_table=11 AIHX01000028.1 Genbank gene 8746 9777 . - . ID=gene-HP17_06727;Name=HP17_06727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06727 AIHX01000028.1 Genbank CDS 8746 9777 . - 0 ID=cds-EIE30343.1;Parent=gene-HP17_06727;Dbxref=NCBI_GP:EIE30343.1;Name=EIE30343.1;Note=COG1442 Lipopolysaccharide biosynthesis proteins%2C LPS:glycosyltransferases;gbkey=CDS;locus_tag=HP17_06727;product=LPS 1%2C 2-glycosyltransferase;protein_id=EIE30343.1;transl_table=11 AIHX01000028.1 Genbank gene 9788 9916 . - . ID=gene-HP17_06732;Name=HP17_06732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06732 AIHX01000028.1 Genbank CDS 9788 9916 . - 0 ID=cds-EIE30344.1;Parent=gene-HP17_06732;Dbxref=NCBI_GP:EIE30344.1;Name=EIE30344.1;gbkey=CDS;locus_tag=HP17_06732;product=putative lipopolysaccharide biosynthesis protein;protein_id=EIE30344.1;transl_table=11 AIHX01000028.1 Genbank gene 10077 11429 . + . ID=gene-HP17_06737;Name=HP17_06737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06737 AIHX01000028.1 Genbank CDS 10077 11429 . + 0 ID=cds-EIE30345.1;Parent=gene-HP17_06737;Dbxref=NCBI_GP:EIE30345.1;Name=EIE30345.1;gbkey=CDS;locus_tag=HP17_06737;product=outer membrane protein;protein_id=EIE30345.1;transl_table=11 AIHX01000028.1 Genbank gene 11532 13397 . + . ID=gene-HP17_06742;Name=HP17_06742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06742 AIHX01000028.1 Genbank CDS 11532 13397 . + 0 ID=cds-EIE30346.1;Parent=gene-HP17_06742;Dbxref=NCBI_GP:EIE30346.1;Name=EIE30346.1;Note=COG0326 Molecular chaperone%2C HSP90 family;gbkey=CDS;locus_tag=HP17_06742;product=heat shock protein 90;protein_id=EIE30346.1;transl_table=11 AIHX01000028.1 Genbank gene 13596 14348 . - . ID=gene-HP17_06747;Name=HP17_06747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06747 AIHX01000028.1 Genbank CDS 13596 14348 . - 0 ID=cds-EIE30347.1;Parent=gene-HP17_06747;Dbxref=NCBI_GP:EIE30347.1;Name=EIE30347.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_06747;product=cysteine-rich protein A;protein_id=EIE30347.1;transl_table=11 AIHX01000028.1 Genbank gene 14429 15595 . - . ID=gene-HP17_06752;Name=HP17_06752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06752 AIHX01000028.1 Genbank CDS 14429 15595 . - 0 ID=cds-EIE30348.1;Parent=gene-HP17_06752;Dbxref=NCBI_GP:EIE30348.1;Name=EIE30348.1;Note=COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases;gbkey=CDS;locus_tag=HP17_06752;product=succinyl-diaminopimelate desuccinylase;protein_id=EIE30348.1;transl_table=11 AIHX01000028.1 Genbank gene 15606 17471 . - . ID=gene-HP17_06757;Name=HP17_06757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06757 AIHX01000028.1 Genbank CDS 15606 17471 . - 0 ID=cds-EIE30349.1;Parent=gene-HP17_06757;Dbxref=NCBI_GP:EIE30349.1;Name=EIE30349.1;Note=COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division;gbkey=CDS;locus_tag=HP17_06757;product=tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;protein_id=EIE30349.1;transl_table=11 AIHX01000028.1 Genbank gene 17567 19225 . + . ID=gene-HP17_06762;Name=HP17_06762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06762 AIHX01000028.1 Genbank CDS 17567 19225 . + 0 ID=cds-EIE30350.1;Parent=gene-HP17_06762;Dbxref=NCBI_GP:EIE30350.1;Name=EIE30350.1;Note=COG0471 Di- and tricarboxylate transporters;gbkey=CDS;locus_tag=HP17_06762;product=sodium-dependent transporter (huNaDC-1);protein_id=EIE30350.1;transl_table=11 AIHX01000028.1 Genbank gene 19238 20038 . + . ID=gene-HP17_06767;Name=HP17_06767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06767 AIHX01000028.1 Genbank CDS 19238 20038 . + 0 ID=cds-EIE30351.1;Parent=gene-HP17_06767;Dbxref=NCBI_GP:EIE30351.1;Name=EIE30351.1;Note=COG0575 CDP-diglyceride synthetase;gbkey=CDS;locus_tag=HP17_06767;product=phosphatidate cytidylyltransferase;protein_id=EIE30351.1;transl_table=11 AIHX01000028.1 Genbank gene 20039 21139 . + . ID=gene-HP17_06772;Name=HP17_06772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06772 AIHX01000028.1 Genbank CDS 20039 21139 . + 0 ID=cds-EIE30352.1;Parent=gene-HP17_06772;Dbxref=NCBI_GP:EIE30352.1;Name=EIE30352.1;Note=COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase;gbkey=CDS;locus_tag=HP17_06772;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=EIE30352.1;transl_table=11 AIHX01000028.1 Genbank gene 21181 21294 . - . ID=gene-HP17_06777;Name=HP17_06777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06777 AIHX01000028.1 Genbank CDS 21181 21294 . - 0 ID=cds-EIE30353.1;Parent=gene-HP17_06777;Dbxref=NCBI_GP:EIE30353.1;Name=EIE30353.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_06777;product=Hypothetical protein;protein_id=EIE30353.1;transl_table=11 AIHX01000028.1 Genbank gene 21320 21871 . - . ID=gene-HP17_06782;Name=HP17_06782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06782 AIHX01000028.1 Genbank CDS 21320 21871 . - 0 ID=cds-EIE30354.1;Parent=gene-HP17_06782;Dbxref=NCBI_GP:EIE30354.1;Name=EIE30354.1;Note=COG1881 Phospholipid-binding protein;gbkey=CDS;locus_tag=HP17_06782;product=Hypothetical protein;protein_id=EIE30354.1;transl_table=11 AIHX01000028.1 Genbank gene 22017 22481 . + . ID=gene-HP17_06787;Name=HP17_06787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06787 AIHX01000028.1 Genbank CDS 22017 22481 . + 0 ID=cds-EIE30355.1;Parent=gene-HP17_06787;Dbxref=NCBI_GP:EIE30355.1;Name=EIE30355.1;gbkey=CDS;locus_tag=HP17_06787;product=Hypothetical protein;protein_id=EIE30355.1;transl_table=11 AIHX01000028.1 Genbank gene 22652 23815 . + . ID=gene-HP17_06792;Name=HP17_06792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06792 AIHX01000028.1 Genbank CDS 22652 23815 . + 0 ID=cds-EIE30356.1;Parent=gene-HP17_06792;Dbxref=NCBI_GP:EIE30356.1;Name=EIE30356.1;Note=COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes;gbkey=CDS;locus_tag=HP17_06792;product=cysteine desulfurase;protein_id=EIE30356.1;transl_table=11 AIHX01000028.1 Genbank gene 23837 24817 . + . ID=gene-HP17_06797;Name=HP17_06797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06797 AIHX01000028.1 Genbank CDS 23837 24817 . + 0 ID=cds-EIE30357.1;Parent=gene-HP17_06797;Dbxref=NCBI_GP:EIE30357.1;Name=EIE30357.1;Note=COG0822 NifU homolog involved in Fe-S cluster formation;gbkey=CDS;locus_tag=HP17_06797;product=nifU-like protein;protein_id=EIE30357.1;transl_table=11 AIHX01000028.1 Genbank gene 24972 25205 . + . ID=gene-HP17_06802;Name=HP17_06802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06802 AIHX01000028.1 Genbank CDS 24972 25205 . + 0 ID=cds-EIE30358.1;Parent=gene-HP17_06802;Dbxref=NCBI_GP:EIE30358.1;Name=EIE30358.1;gbkey=CDS;locus_tag=HP17_06802;product=Hypothetical protein;protein_id=EIE30358.1;transl_table=11 AIHX01000028.1 Genbank gene 25317 25614 . + . ID=gene-HP17_06807;Name=HP17_06807;end_range=25614,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06807;partial=true AIHX01000028.1 Genbank CDS 25317 25614 . + 0 ID=cds-EIE30359.1;Parent=gene-HP17_06807;Dbxref=NCBI_GP:EIE30359.1;Name=EIE30359.1;Note=COG1066 Predicted ATP-dependent serine protease;end_range=25614,.;gbkey=CDS;locus_tag=HP17_06807;partial=true;product=DNA repair protein RadA;protein_id=EIE30359.1;transl_table=11 ##sequence-region AIHX01000029.1 1 3654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000029.1 Genbank region 1 3654 . + . ID=AIHX01000029.1:1..3654;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000029.1 Genbank gene 3 989 . + . ID=gene-HP17_06812;Name=HP17_06812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06812 AIHX01000029.1 Genbank CDS 3 989 . + 0 ID=cds-EIE30328.1;Parent=gene-HP17_06812;Dbxref=NCBI_GP:EIE30328.1;Name=EIE30328.1;Note=COG1066 Predicted ATP-dependent serine protease;gbkey=CDS;locus_tag=HP17_06812;product=DNA repair protein RadA;protein_id=EIE30328.1;transl_table=11 AIHX01000029.1 Genbank gene 1112 2191 . + . ID=gene-HP17_06817;Name=HP17_06817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06817 AIHX01000029.1 Genbank CDS 1112 2191 . + 0 ID=cds-EIE30329.1;Parent=gene-HP17_06817;Dbxref=NCBI_GP:EIE30329.1;Name=EIE30329.1;Note=COG0225 Peptide methionine sulfoxide reductase;gbkey=CDS;locus_tag=HP17_06817;product=bifunctional methionine sulfoxide reductase A/B protein;protein_id=EIE30329.1;transl_table=11 AIHX01000029.1 Genbank gene 2227 2337 . + . ID=gene-HP17_06822;Name=HP17_06822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06822 AIHX01000029.1 Genbank CDS 2227 2337 . + 0 ID=cds-EIE30330.1;Parent=gene-HP17_06822;Dbxref=NCBI_GP:EIE30330.1;Name=EIE30330.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_06822;product=Hypothetical protein;protein_id=EIE30330.1;transl_table=11 AIHX01000029.1 Genbank gene 2396 2509 . + . ID=gene-HP17_06827;Name=HP17_06827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06827 AIHX01000029.1 Genbank CDS 2396 2509 . + 0 ID=cds-EIE30331.1;Parent=gene-HP17_06827;Dbxref=NCBI_GP:EIE30331.1;Name=EIE30331.1;gbkey=CDS;locus_tag=HP17_06827;product=Hypothetical protein;protein_id=EIE30331.1;transl_table=11 AIHX01000029.1 Genbank gene 2577 3410 . - . ID=gene-HP17_06832;Name=HP17_06832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06832 AIHX01000029.1 Genbank CDS 2577 3410 . - 0 ID=cds-EIE30332.1;Parent=gene-HP17_06832;Dbxref=NCBI_GP:EIE30332.1;Name=EIE30332.1;Note=COG0730 Predicted permeases;gbkey=CDS;locus_tag=HP17_06832;product=Hypothetical protein;protein_id=EIE30332.1;transl_table=11 ##sequence-region AIHX01000030.1 1 1474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000030.1 Genbank region 1 1474 . + . ID=AIHX01000030.1:1..1474;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000030.1 Genbank gene 1 118 . + . ID=gene-HP17_06837;Name=HP17_06837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06837;partial=true;start_range=.,1 AIHX01000030.1 Genbank CDS 1 118 . + 1 ID=cds-EIE30310.1;Parent=gene-HP17_06837;Dbxref=NCBI_GP:EIE30310.1;Name=EIE30310.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_06837;partial=true;product=Hypothetical protein;protein_id=EIE30310.1;start_range=.,1;transl_table=11 AIHX01000030.1 Genbank gene 596 1474 . - . ID=gene-HP17_06842;Name=HP17_06842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06842 AIHX01000030.1 Genbank CDS 596 1474 . - 0 ID=cds-EIE30311.1;Parent=gene-HP17_06842;Dbxref=NCBI_GP:EIE30311.1;Name=EIE30311.1;Note=COG1295 Predicted membrane protein;gbkey=CDS;locus_tag=HP17_06842;product=putative ribonuclease N;protein_id=EIE30311.1;transl_table=11 ##sequence-region AIHX01000031.1 1 647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000031.1 Genbank region 1 647 . + . ID=AIHX01000031.1:1..647;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000031.1 Genbank gene 1 647 . - . ID=gene-HP17_06847;Name=HP17_06847;end_range=647,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06847;partial=true;start_range=.,1 AIHX01000031.1 Genbank CDS 1 647 . - 1 ID=cds-EIE30303.1;Parent=gene-HP17_06847;Dbxref=NCBI_GP:EIE30303.1;Name=EIE30303.1;Note=COG0502 Biotin synthase and related enzymes;end_range=647,.;gbkey=CDS;locus_tag=HP17_06847;partial=true;product=biotin synthase;protein_id=EIE30303.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000032.1 1 389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000032.1 Genbank region 1 389 . + . ID=AIHX01000032.1:1..389;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000032.1 Genbank gene 1 147 . - . ID=gene-HP17_06852;Name=HP17_06852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06852;partial=true;start_range=.,1 AIHX01000032.1 Genbank CDS 1 147 . - 0 ID=cds-EIE30299.1;Parent=gene-HP17_06852;Dbxref=NCBI_GP:EIE30299.1;Name=EIE30299.1;Note=COG0502 Biotin synthase and related enzymes;gbkey=CDS;locus_tag=HP17_06852;partial=true;product=biotin synthase;protein_id=EIE30299.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000033.1 1 30958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000033.1 Genbank region 1 30958 . + . ID=AIHX01000033.1:1..30958;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000033.1 Genbank gene 26 124 . - . ID=gene-HP17_00536;Name=HP17_00536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00536 AIHX01000033.1 Genbank CDS 26 124 . - 0 ID=cds-EIE30270.1;Parent=gene-HP17_00536;Dbxref=NCBI_GP:EIE30270.1;Name=EIE30270.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_00536;product=Hypothetical protein;protein_id=EIE30270.1;transl_table=11 AIHX01000033.1 Genbank gene 229 1227 . - . ID=gene-HP17_00541;Name=HP17_00541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00541 AIHX01000033.1 Genbank CDS 229 1227 . - 0 ID=cds-EIE30271.1;Parent=gene-HP17_00541;Dbxref=NCBI_GP:EIE30271.1;Name=EIE30271.1;Note=COG0309 Hydrogenase maturation factor;gbkey=CDS;locus_tag=HP17_00541;product=hydrogenase expression/formation protein;protein_id=EIE30271.1;transl_table=11 AIHX01000033.1 Genbank gene 1230 3482 . - . ID=gene-HP17_00546;Name=HP17_00546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00546 AIHX01000033.1 Genbank CDS 1230 3482 . - 0 ID=cds-EIE30272.1;Parent=gene-HP17_00546;Dbxref=NCBI_GP:EIE30272.1;Name=EIE30272.1;Note=COG0068 Hydrogenase maturation factor;gbkey=CDS;locus_tag=HP17_00546;product=transcriptional regulator (hypF);protein_id=EIE30272.1;transl_table=11 AIHX01000033.1 Genbank gene 3479 4471 . - . ID=gene-HP17_00551;Name=HP17_00551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00551 AIHX01000033.1 Genbank CDS 3479 4471 . - 0 ID=cds-EIE30273.1;Parent=gene-HP17_00551;Dbxref=NCBI_GP:EIE30273.1;Name=EIE30273.1;Note=COG2957 Peptidylarginine deiminase and related enzymes;gbkey=CDS;locus_tag=HP17_00551;product=Hypothetical protein;protein_id=EIE30273.1;transl_table=11 AIHX01000033.1 Genbank gene 4530 5222 . - . ID=gene-HP17_00556;Name=HP17_00556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00556 AIHX01000033.1 Genbank CDS 4530 5222 . - 0 ID=cds-EIE30274.1;Parent=gene-HP17_00556;Dbxref=NCBI_GP:EIE30274.1;Name=EIE30274.1;Note=COG0863 DNA modification methylase;gbkey=CDS;locus_tag=HP17_00556;product=type II adenine methyltransferase;protein_id=EIE30274.1;transl_table=11 AIHX01000033.1 Genbank gene 5219 6286 . - . ID=gene-HP17_00561;Name=HP17_00561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00561 AIHX01000033.1 Genbank CDS 5219 6286 . - 0 ID=cds-EIE30275.1;Parent=gene-HP17_00561;Dbxref=NCBI_GP:EIE30275.1;Name=EIE30275.1;Note=COG0270 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_00561;product=cytosine specific DNA methyltransferase;protein_id=EIE30275.1;transl_table=11 AIHX01000033.1 Genbank gene 6318 7517 . - . ID=gene-HP17_00566;Name=HP17_00566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00566 AIHX01000033.1 Genbank CDS 6318 7517 . - 0 ID=cds-EIE30276.1;Parent=gene-HP17_00566;Dbxref=NCBI_GP:EIE30276.1;Name=EIE30276.1;Note=COG3183 Predicted restriction endonuclease;gbkey=CDS;locus_tag=HP17_00566;product=restriction endonuclease;protein_id=EIE30276.1;transl_table=11 AIHX01000033.1 Genbank gene 7661 8920 . - . ID=gene-HP17_00571;Name=HP17_00571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00571 AIHX01000033.1 Genbank CDS 7661 8920 . - 0 ID=cds-EIE30277.1;Parent=gene-HP17_00571;Dbxref=NCBI_GP:EIE30277.1;Name=EIE30277.1;Note=COG0008 Glutamyl- and glutaminyl-tRNA synthetases;gbkey=CDS;locus_tag=HP17_00571;product=Hypothetical protein;protein_id=EIE30277.1;transl_table=11 AIHX01000033.1 Genbank gene 8917 11388 . - . ID=gene-HP17_00576;Name=HP17_00576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00576 AIHX01000033.1 Genbank CDS 8917 11388 . - 0 ID=cds-EIE30278.1;Parent=gene-HP17_00576;Dbxref=NCBI_GP:EIE30278.1;Name=EIE30278.1;Note=COG0270 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_00576;product=adenine/cytosine DNA methyltransferase;protein_id=EIE30278.1;transl_table=11 AIHX01000033.1 Genbank gene 11427 12917 . - . ID=gene-HP17_00581;Name=HP17_00581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00581 AIHX01000033.1 Genbank CDS 11427 12917 . - 0 ID=cds-EIE30279.1;Parent=gene-HP17_00581;Dbxref=NCBI_GP:EIE30279.1;Name=EIE30279.1;Note=COG0591 Na+/proline symporter;gbkey=CDS;locus_tag=HP17_00581;product=Symporter%2C SSS family (Proline Permease);protein_id=EIE30279.1;transl_table=11 AIHX01000033.1 Genbank gene 12944 16501 . - . ID=gene-HP17_00586;Name=HP17_00586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00586 AIHX01000033.1 Genbank CDS 12944 16501 . - 0 ID=cds-EIE30280.1;Parent=gene-HP17_00586;Dbxref=NCBI_GP:EIE30280.1;Name=EIE30280.1;Note=COG0506 Proline dehydrogenase;gbkey=CDS;locus_tag=HP17_00586;product=delta-1-pyrroline-5-carboxylate dehydrogenase;protein_id=EIE30280.1;transl_table=11 AIHX01000033.1 Genbank gene 16823 17032 . + . ID=gene-HP17_00591;Name=HP17_00591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00591 AIHX01000033.1 Genbank CDS 16823 17032 . + 0 ID=cds-EIE30281.1;Parent=gene-HP17_00591;Dbxref=NCBI_GP:EIE30281.1;Name=EIE30281.1;gbkey=CDS;locus_tag=HP17_00591;product=Hypothetical protein;protein_id=EIE30281.1;transl_table=11 AIHX01000033.1 Genbank gene 17624 18325 . + . ID=gene-HP17_00596;Name=HP17_00596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00596 AIHX01000033.1 Genbank CDS 17624 18325 . + 0 ID=cds-EIE30282.1;Parent=gene-HP17_00596;Dbxref=NCBI_GP:EIE30282.1;Name=EIE30282.1;gbkey=CDS;locus_tag=HP17_00596;product=Hypothetical protein;protein_id=EIE30282.1;transl_table=11 AIHX01000033.1 Genbank gene 18327 19037 . + . ID=gene-HP17_00601;Name=HP17_00601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00601 AIHX01000033.1 Genbank CDS 18327 19037 . + 0 ID=cds-EIE30283.1;Parent=gene-HP17_00601;Dbxref=NCBI_GP:EIE30283.1;Name=EIE30283.1;Note=COG1882 Pyruvate-formate lyase;gbkey=CDS;locus_tag=HP17_00601;product=Hypothetical protein;protein_id=EIE30283.1;transl_table=11 AIHX01000033.1 Genbank gene 21501 22064 . + . ID=gene-HP17_00616;Name=HP17_00616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00616 AIHX01000033.1 Genbank CDS 21501 22064 . + 0 ID=cds-EIE30284.1;Parent=gene-HP17_00616;Dbxref=NCBI_GP:EIE30284.1;Name=EIE30284.1;gbkey=CDS;locus_tag=HP17_00616;product=Hypothetical protein;protein_id=EIE30284.1;transl_table=11 AIHX01000033.1 Genbank gene 22080 22340 . + . ID=gene-HP17_00621;Name=HP17_00621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00621 AIHX01000033.1 Genbank CDS 22080 22340 . + 0 ID=cds-EIE30285.1;Parent=gene-HP17_00621;Dbxref=NCBI_GP:EIE30285.1;Name=EIE30285.1;gbkey=CDS;locus_tag=HP17_00621;product=Hypothetical protein;protein_id=EIE30285.1;transl_table=11 AIHX01000033.1 Genbank gene 24147 24497 . + . ID=gene-HP17_00651;Name=HP17_00651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00651 AIHX01000033.1 Genbank CDS 24147 24497 . + 0 ID=cds-EIE30286.1;Parent=gene-HP17_00651;Dbxref=NCBI_GP:EIE30286.1;Name=EIE30286.1;gbkey=CDS;locus_tag=HP17_00651;product=Hypothetical protein;protein_id=EIE30286.1;transl_table=11 AIHX01000033.1 Genbank pseudogene 24494 26914 . + . ID=gene-HP17_00666;Name=HP17_00666;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_00666;pseudo=true AIHX01000033.1 Genbank sequence_feature 24494 26914 . + . ID=id-HP17_00666;Note=potential frameshift: common BLAST hit: gi|108562492|ref|YP_626808.1| ATP-binding protein;gbkey=misc_feature;locus_tag=HP17_00666;pseudo=true AIHX01000033.1 Genbank gene 27027 27824 . - . ID=gene-HP17_00676;Name=HP17_00676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00676 AIHX01000033.1 Genbank CDS 27027 27824 . - 0 ID=cds-EIE30287.1;Parent=gene-HP17_00676;Dbxref=NCBI_GP:EIE30287.1;Name=EIE30287.1;Note=COG0829 Urease accessory protein UreH;gbkey=CDS;locus_tag=HP17_00676;product=urease accessory protein UreH;protein_id=EIE30287.1;transl_table=11 AIHX01000033.1 Genbank gene 27824 28423 . - . ID=gene-HP17_00681;Name=HP17_00681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00681 AIHX01000033.1 Genbank CDS 27824 28423 . - 0 ID=cds-EIE30288.1;Parent=gene-HP17_00681;Dbxref=NCBI_GP:EIE30288.1;Name=EIE30288.1;Note=COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase;gbkey=CDS;locus_tag=HP17_00681;product=Urease accessory protein UreG;protein_id=EIE30288.1;transl_table=11 AIHX01000033.1 Genbank gene 28452 29222 . - . ID=gene-HP17_00686;Name=HP17_00686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00686 AIHX01000033.1 Genbank CDS 28452 29222 . - 0 ID=cds-EIE30289.1;Parent=gene-HP17_00686;Dbxref=NCBI_GP:EIE30289.1;Name=EIE30289.1;Note=COG0830 Urease accessory protein UreF;gbkey=CDS;locus_tag=HP17_00686;product=urease accessory protein;protein_id=EIE30289.1;transl_table=11 AIHX01000033.1 Genbank pseudogene 29245 29746 . - . ID=gene-HP17_00691;Name=HP17_00691;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_00691;pseudo=true AIHX01000033.1 Genbank sequence_feature 29245 29746 . - . ID=id-HP17_00691;Note=potential frameshift: common BLAST hit: gi|15644700|ref|NP_206870.1| urease accessory protein UreE;gbkey=misc_feature;locus_tag=HP17_00691;pseudo=true AIHX01000033.1 Genbank gene 29748 30335 . - . ID=gene-HP17_00701;Name=HP17_00701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00701 AIHX01000033.1 Genbank CDS 29748 30335 . - 0 ID=cds-EIE30290.1;Parent=gene-HP17_00701;Dbxref=NCBI_GP:EIE30290.1;Name=EIE30290.1;Note=COG1138 Cytochrome c biogenesis factor;gbkey=CDS;locus_tag=HP17_00701;product=urease accessory protein UreI;protein_id=EIE30290.1;transl_table=11 AIHX01000033.1 Genbank gene 30528 30956 . - . ID=gene-HP17_00706;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=HP17_00706 AIHX01000033.1 Genbank CDS 30528 30956 . - 0 ID=cds-EIE30291.1;Parent=gene-HP17_00706;Dbxref=NCBI_GP:EIE30291.1;Name=EIE30291.1;Note=COG0804 Urea amidohydrolase (urease) alpha subunit;gbkey=CDS;gene=ureB;locus_tag=HP17_00706;product=urease subunit beta;protein_id=EIE30291.1;transl_table=11 ##sequence-region AIHX01000034.1 1 14172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000034.1 Genbank region 1 14172 . + . ID=AIHX01000034.1:1..14172;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000034.1 Genbank pseudogene 1 2461 . + . ID=gene-HP17_06862;Name=HP17_06862;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06862;pseudo=true AIHX01000034.1 Genbank sequence_feature 1 2461 . + . ID=id-HP17_06862;Note=potential frameshift: common BLAST hit: gi|254779923|ref|YP_003058029.1| type III restriction enzyme R protein (res 1);gbkey=misc_feature;locus_tag=HP17_06862;pseudo=true AIHX01000034.1 Genbank pseudogene 2464 4319 . + . ID=gene-HP17_06872;Name=HP17_06872;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_06872;pseudo=true AIHX01000034.1 Genbank sequence_feature 2464 4319 . + . ID=id-HP17_06872;Note=potential frameshift: common BLAST hit: gi|308185164|ref|YP_003929297.1| putative type III restriction enzyme M protein;gbkey=misc_feature;locus_tag=HP17_06872;pseudo=true AIHX01000034.1 Genbank gene 4430 5293 . + . ID=gene-HP17_06877;Name=HP17_06877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06877 AIHX01000034.1 Genbank CDS 4430 5293 . + 0 ID=cds-EIE30259.1;Parent=gene-HP17_06877;Dbxref=NCBI_GP:EIE30259.1;Name=EIE30259.1;Note=COG1864 DNA/RNA endonuclease G%2C NUC1;gbkey=CDS;locus_tag=HP17_06877;product=putative endonuclease G;protein_id=EIE30259.1;transl_table=11 AIHX01000034.1 Genbank gene 5618 6445 . - . ID=gene-HP17_06882;Name=HP17_06882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06882 AIHX01000034.1 Genbank CDS 5618 6445 . - 0 ID=cds-EIE30260.1;Parent=gene-HP17_06882;Dbxref=NCBI_GP:EIE30260.1;Name=EIE30260.1;Note=COG0287 Prephenate dehydrogenase;gbkey=CDS;locus_tag=HP17_06882;product=prephenate dehydrogenase;protein_id=EIE30260.1;transl_table=11 AIHX01000034.1 Genbank gene 6454 8916 . - . ID=gene-HP17_06887;Name=HP17_06887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06887 AIHX01000034.1 Genbank CDS 6454 8916 . - 0 ID=cds-EIE30261.1;Parent=gene-HP17_06887;Dbxref=NCBI_GP:EIE30261.1;Name=EIE30261.1;Note=COG0466 ATP-dependent Lon protease%2C bacterial type;gbkey=CDS;locus_tag=HP17_06887;product=ATP-dependent protease La;protein_id=EIE30261.1;transl_table=11 AIHX01000034.1 Genbank gene 8959 9621 . - . ID=gene-HP17_06892;Name=HP17_06892;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06892 AIHX01000034.1 Genbank CDS 8959 9621 . - 0 ID=cds-EIE30262.1;Parent=gene-HP17_06892;Dbxref=NCBI_GP:EIE30262.1;Name=EIE30262.1;Note=COG4105 DNA uptake lipoprotein;gbkey=CDS;locus_tag=HP17_06892;product=putative lipoprotein;protein_id=EIE30262.1;transl_table=11 AIHX01000034.1 Genbank gene 9695 9805 . - . ID=gene-HP17_06897;Name=HP17_06897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06897 AIHX01000034.1 Genbank CDS 9695 9805 . - 0 ID=cds-EIE30263.1;Parent=gene-HP17_06897;Dbxref=NCBI_GP:EIE30263.1;Name=EIE30263.1;gbkey=CDS;locus_tag=HP17_06897;product=Hypothetical protein;protein_id=EIE30263.1;transl_table=11 AIHX01000034.1 Genbank gene 10022 10411 . + . ID=gene-HP17_06902;Name=HP17_06902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06902 AIHX01000034.1 Genbank CDS 10022 10411 . + 0 ID=cds-EIE30264.1;Parent=gene-HP17_06902;Dbxref=NCBI_GP:EIE30264.1;Name=EIE30264.1;Note=COG1699 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_06902;product=flagellar assembly protein FliW;protein_id=EIE30264.1;transl_table=11 AIHX01000034.1 Genbank gene 10593 11072 . + . ID=gene-HP17_06907;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=HP17_06907 AIHX01000034.1 Genbank CDS 10593 11072 . + 0 ID=cds-EIE30265.1;Parent=gene-HP17_06907;Dbxref=NCBI_GP:EIE30265.1;Name=EIE30265.1;Note=COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases;gbkey=CDS;gene=fabZ;locus_tag=HP17_06907;product=(3R)-hydroxymyristoyl-ACP dehydratase;protein_id=EIE30265.1;transl_table=11 AIHX01000034.1 Genbank gene 11075 11887 . + . ID=gene-HP17_06912;Name=HP17_06912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06912 AIHX01000034.1 Genbank CDS 11075 11887 . + 0 ID=cds-EIE30266.1;Parent=gene-HP17_06912;Dbxref=NCBI_GP:EIE30266.1;Name=EIE30266.1;Note=COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase;gbkey=CDS;locus_tag=HP17_06912;product=UDP-N-acetylglucosamine acyltransferase;protein_id=EIE30266.1;transl_table=11 AIHX01000034.1 Genbank gene 11889 13235 . + . ID=gene-HP17_06917;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HP17_06917 AIHX01000034.1 Genbank CDS 11889 13235 . + 0 ID=cds-EIE30267.1;Parent=gene-HP17_06917;Dbxref=NCBI_GP:EIE30267.1;Name=EIE30267.1;Note=COG1219 ATP-dependent protease Clp%2C ATPase subunit;gbkey=CDS;gene=clpX;locus_tag=HP17_06917;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=EIE30267.1;transl_table=11 AIHX01000034.1 Genbank gene 13278 14172 . + . ID=gene-HP17_06922;Name=HP17_06922;end_range=14172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06922;partial=true AIHX01000034.1 Genbank CDS 13278 14172 . + 0 ID=cds-EIE30268.1;Parent=gene-HP17_06922;Dbxref=NCBI_GP:EIE30268.1;Name=EIE30268.1;Note=COG1077 Actin-like ATPase involved in cell morphogenesis;end_range=14172,.;gbkey=CDS;locus_tag=HP17_06922;partial=true;product=rod shape-determining protein MreB;protein_id=EIE30268.1;transl_table=11 ##sequence-region AIHX01000035.1 1 19304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000035.1 Genbank region 1 19304 . + . ID=AIHX01000035.1:1..19304;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000035.1 Genbank gene 1 118 . + . ID=gene-HP17_06927;Name=HP17_06927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06927;partial=true;start_range=.,1 AIHX01000035.1 Genbank CDS 1 118 . + 1 ID=cds-EIE30236.1;Parent=gene-HP17_06927;Dbxref=NCBI_GP:EIE30236.1;Name=EIE30236.1;Note=COG1077 Actin-like ATPase involved in cell morphogenesis;gbkey=CDS;locus_tag=HP17_06927;partial=true;product=rod shape-determining protein MreB;protein_id=EIE30236.1;start_range=.,1;transl_table=11 AIHX01000035.1 Genbank gene 122 868 . + . ID=gene-HP17_06932;Name=HP17_06932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06932 AIHX01000035.1 Genbank CDS 122 868 . + 0 ID=cds-EIE30237.1;Parent=gene-HP17_06932;Dbxref=NCBI_GP:EIE30237.1;Name=EIE30237.1;Note=COG1792 Cell shape-determining protein;gbkey=CDS;locus_tag=HP17_06932;product=rod shape-determining protein MreC;protein_id=EIE30237.1;transl_table=11 AIHX01000035.1 Genbank gene 923 3823 . - . ID=gene-HP17_06937;Name=HP17_06937;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06937 AIHX01000035.1 Genbank CDS 923 3823 . - 0 ID=cds-EIE30238.1;Parent=gene-HP17_06937;Dbxref=NCBI_GP:EIE30238.1;Name=EIE30238.1;Note=COG4096 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases;gbkey=CDS;locus_tag=HP17_06937;product=Hypothetical protein;protein_id=EIE30238.1;transl_table=11 AIHX01000035.1 Genbank gene 3833 4732 . - . ID=gene-HP17_06942;Name=HP17_06942;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06942 AIHX01000035.1 Genbank CDS 3833 4732 . - 0 ID=cds-EIE30239.1;Parent=gene-HP17_06942;Dbxref=NCBI_GP:EIE30239.1;Name=EIE30239.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_06942;product=adenine-specific DNA methylase;protein_id=EIE30239.1;transl_table=11 AIHX01000035.1 Genbank gene 4867 6300 . - . ID=gene-HP17_06947;Name=HP17_06947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06947 AIHX01000035.1 Genbank CDS 4867 6300 . - 0 ID=cds-EIE30240.1;Parent=gene-HP17_06947;Dbxref=NCBI_GP:EIE30240.1;Name=EIE30240.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_06947;product=type III restriction enzyme M protein;protein_id=EIE30240.1;transl_table=11 AIHX01000035.1 Genbank gene 6371 7012 . + . ID=gene-HP17_06952;Name=HP17_06952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06952 AIHX01000035.1 Genbank CDS 6371 7012 . + 0 ID=cds-EIE30241.1;Parent=gene-HP17_06952;Dbxref=NCBI_GP:EIE30241.1;Name=EIE30241.1;Note=COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain;gbkey=CDS;locus_tag=HP17_06952;product=response regulator;protein_id=EIE30241.1;transl_table=11 AIHX01000035.1 Genbank gene 7062 8180 . + . ID=gene-HP17_06957;Name=HP17_06957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06957 AIHX01000035.1 Genbank CDS 7062 8180 . + 0 ID=cds-EIE30242.1;Parent=gene-HP17_06957;Dbxref=NCBI_GP:EIE30242.1;Name=EIE30242.1;Note=COG0642 Signal transduction histidine kinase;gbkey=CDS;locus_tag=HP17_06957;product=Hypothetical protein;protein_id=EIE30242.1;transl_table=11 AIHX01000035.1 Genbank gene 8183 9577 . + . ID=gene-HP17_06962;Name=HP17_06962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06962 AIHX01000035.1 Genbank CDS 8183 9577 . + 0 ID=cds-EIE30243.1;Parent=gene-HP17_06962;Dbxref=NCBI_GP:EIE30243.1;Name=EIE30243.1;Note=COG0062 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_06962;product=Hypothetical protein;protein_id=EIE30243.1;transl_table=11 AIHX01000035.1 Genbank gene 9588 11048 . + . ID=gene-HP17_06967;Name=HP17_06967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06967 AIHX01000035.1 Genbank CDS 9588 11048 . + 0 ID=cds-EIE30244.1;Parent=gene-HP17_06967;Dbxref=NCBI_GP:EIE30244.1;Name=EIE30244.1;Note=COG0305 Replicative DNA helicase;gbkey=CDS;locus_tag=HP17_06967;product=replicative DNA helicase;protein_id=EIE30244.1;transl_table=11 AIHX01000035.1 Genbank gene 11045 12358 . + . ID=gene-HP17_06972;Name=HP17_06972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06972 AIHX01000035.1 Genbank CDS 11045 12358 . + 0 ID=cds-EIE30245.1;Parent=gene-HP17_06972;Dbxref=NCBI_GP:EIE30245.1;Name=EIE30245.1;Note=COG0658 Predicted membrane metal-binding protein;gbkey=CDS;locus_tag=HP17_06972;product=competence locus E;protein_id=EIE30245.1;transl_table=11 AIHX01000035.1 Genbank gene 12387 13271 . + . ID=gene-HP17_06977;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=HP17_06977 AIHX01000035.1 Genbank CDS 12387 13271 . + 0 ID=cds-EIE30246.1;Parent=gene-HP17_06977;Dbxref=NCBI_GP:EIE30246.1;Name=EIE30246.1;Note=COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases;gbkey=CDS;gene=ubiA;locus_tag=HP17_06977;product=prenyltransferase;protein_id=EIE30246.1;transl_table=11 AIHX01000035.1 Genbank gene 13772 14278 . + . ID=gene-HP17_06992;Name=HP17_06992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06992 AIHX01000035.1 Genbank CDS 13772 14278 . + 0 ID=cds-EIE30247.1;Parent=gene-HP17_06992;Dbxref=NCBI_GP:EIE30247.1;Name=EIE30247.1;gbkey=CDS;locus_tag=HP17_06992;product=Hypothetical protein;protein_id=EIE30247.1;transl_table=11 AIHX01000035.1 Genbank gene 14272 15075 . + . ID=gene-HP17_06997;Name=HP17_06997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_06997 AIHX01000035.1 Genbank CDS 14272 15075 . + 0 ID=cds-EIE30248.1;Parent=gene-HP17_06997;Dbxref=NCBI_GP:EIE30248.1;Name=EIE30248.1;Note=COG0688 Phosphatidylserine decarboxylase;gbkey=CDS;locus_tag=HP17_06997;product=phosphatidylserine decarboxylase;protein_id=EIE30248.1;transl_table=11 AIHX01000035.1 Genbank gene 15065 16075 . + . ID=gene-HP17_07002;Name=HP17_07002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07002 AIHX01000035.1 Genbank CDS 15065 16075 . + 0 ID=cds-EIE30249.1;Parent=gene-HP17_07002;Dbxref=NCBI_GP:EIE30249.1;Name=EIE30249.1;Note=COG0379 Quinolinate synthase;gbkey=CDS;locus_tag=HP17_07002;product=quinolinate synthetase;protein_id=EIE30249.1;transl_table=11 AIHX01000035.1 Genbank gene 16075 16896 . + . ID=gene-HP17_07007;Name=HP17_07007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07007 AIHX01000035.1 Genbank CDS 16075 16896 . + 0 ID=cds-EIE30250.1;Parent=gene-HP17_07007;Dbxref=NCBI_GP:EIE30250.1;Name=EIE30250.1;Note=COG0157 Nicotinate-nucleotide pyrophosphorylase;gbkey=CDS;locus_tag=HP17_07007;product=nicotinate-nucleotide pyrophosphorylase;protein_id=EIE30250.1;transl_table=11 AIHX01000035.1 Genbank gene 16921 19304 . + . ID=gene-HP17_07012;Name=HP17_07012;end_range=19304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07012;partial=true AIHX01000035.1 Genbank CDS 16921 19304 . + 0 ID=cds-EIE30251.1;Parent=gene-HP17_07012;Dbxref=NCBI_GP:EIE30251.1;Name=EIE30251.1;Note=COG0286 Type I restriction-modification system methyltransferase subunit;end_range=19304,.;gbkey=CDS;locus_tag=HP17_07012;partial=true;product=Hypothetical protein;protein_id=EIE30251.1;transl_table=11 ##sequence-region AIHX01000036.1 1 804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000036.1 Genbank region 1 804 . + . ID=AIHX01000036.1:1..804;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000036.1 Genbank gene 1 804 . + . ID=gene-HP17_07017;Name=HP17_07017;end_range=804,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07017;partial=true;start_range=.,1 AIHX01000036.1 Genbank CDS 1 804 . + 1 ID=cds-EIE30228.1;Parent=gene-HP17_07017;Dbxref=NCBI_GP:EIE30228.1;Name=EIE30228.1;Note=COG4889 Predicted helicase;end_range=804,.;gbkey=CDS;locus_tag=HP17_07017;partial=true;product=Hypothetical protein;protein_id=EIE30228.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000037.1 1 6249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000037.1 Genbank region 1 6249 . + . ID=AIHX01000037.1:1..6249;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000037.1 Genbank gene 1 265 . + . ID=gene-HP17_07022;Name=HP17_07022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07022;partial=true;start_range=.,1 AIHX01000037.1 Genbank CDS 1 265 . + 1 ID=cds-EIE30220.1;Parent=gene-HP17_07022;Dbxref=NCBI_GP:EIE30220.1;Name=EIE30220.1;gbkey=CDS;locus_tag=HP17_07022;partial=true;product=Hypothetical protein;protein_id=EIE30220.1;start_range=.,1;transl_table=11 AIHX01000037.1 Genbank gene 385 1464 . + . ID=gene-HP17_07027;Name=HP17_07027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07027 AIHX01000037.1 Genbank CDS 385 1464 . + 0 ID=cds-EIE30221.1;Parent=gene-HP17_07027;Dbxref=NCBI_GP:EIE30221.1;Name=EIE30221.1;Note=COG0863 DNA modification methylase;gbkey=CDS;locus_tag=HP17_07027;product=adenine specific DNA methyltransferase;protein_id=EIE30221.1;transl_table=11 AIHX01000037.1 Genbank gene 1464 2081 . + . ID=gene-HP17_07032;Name=HP17_07032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07032 AIHX01000037.1 Genbank CDS 1464 2081 . + 0 ID=cds-EIE30222.1;Parent=gene-HP17_07032;Dbxref=NCBI_GP:EIE30222.1;Name=EIE30222.1;gbkey=CDS;locus_tag=HP17_07032;product=Hypothetical protein;protein_id=EIE30222.1;transl_table=11 AIHX01000037.1 Genbank gene 2104 2331 . + . ID=gene-HP17_07037;Name=HP17_07037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07037 AIHX01000037.1 Genbank CDS 2104 2331 . + 0 ID=cds-EIE30223.1;Parent=gene-HP17_07037;Dbxref=NCBI_GP:EIE30223.1;Name=EIE30223.1;gbkey=CDS;locus_tag=HP17_07037;product=type II R-M system restriction endonuclease;protein_id=EIE30223.1;transl_table=11 AIHX01000037.1 Genbank gene 2557 3921 . + . ID=gene-HP17_07042;Name=HP17_07042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07042 AIHX01000037.1 Genbank CDS 2557 3921 . + 0 ID=cds-EIE30224.1;Parent=gene-HP17_07042;Dbxref=NCBI_GP:EIE30224.1;Name=EIE30224.1;Note=COG0793 Periplasmic protease;gbkey=CDS;locus_tag=HP17_07042;product=carboxyl-terminal protease;protein_id=EIE30224.1;transl_table=11 AIHX01000037.1 Genbank gene 3984 5099 . + . ID=gene-HP17_07047;Name=HP17_07047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07047 AIHX01000037.1 Genbank CDS 3984 5099 . + 0 ID=cds-EIE30225.1;Parent=gene-HP17_07047;Dbxref=NCBI_GP:EIE30225.1;Name=EIE30225.1;gbkey=CDS;locus_tag=HP17_07047;product=Hypothetical protein;protein_id=EIE30225.1;transl_table=11 AIHX01000037.1 Genbank gene 5086 5799 . + . ID=gene-HP17_07052;Name=HP17_07052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07052 AIHX01000037.1 Genbank CDS 5086 5799 . + 0 ID=cds-EIE30226.1;Parent=gene-HP17_07052;Dbxref=NCBI_GP:EIE30226.1;Name=EIE30226.1;Note=COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase;gbkey=CDS;locus_tag=HP17_07052;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=EIE30226.1;transl_table=11 AIHX01000037.1 Genbank gene 5796 6249 . + . ID=gene-HP17_07057;Name=HP17_07057;end_range=6249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07057;partial=true AIHX01000037.1 Genbank CDS 5796 6249 . + 0 ID=cds-EIE30227.1;Parent=gene-HP17_07057;Dbxref=NCBI_GP:EIE30227.1;Name=EIE30227.1;Note=COG0692 Uracil DNA glycosylase;end_range=6249,.;gbkey=CDS;locus_tag=HP17_07057;partial=true;product=uracil-DNA glycosylase;protein_id=EIE30227.1;transl_table=11 ##sequence-region AIHX01000038.1 1 4388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000038.1 Genbank region 1 4388 . + . ID=AIHX01000038.1:1..4388;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000038.1 Genbank gene 1 198 . + . ID=gene-HP17_07062;Name=HP17_07062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07062;partial=true;start_range=.,1 AIHX01000038.1 Genbank CDS 1 198 . + 0 ID=cds-EIE30201.1;Parent=gene-HP17_07062;Dbxref=NCBI_GP:EIE30201.1;Name=EIE30201.1;Note=COG0692 Uracil DNA glycosylase;gbkey=CDS;locus_tag=HP17_07062;partial=true;product=uracil-DNA glycosylase;protein_id=EIE30201.1;start_range=.,1;transl_table=11 AIHX01000038.1 Genbank gene 287 1279 . + . ID=gene-HP17_07067;Name=HP17_07067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07067 AIHX01000038.1 Genbank CDS 287 1279 . + 0 ID=cds-EIE30202.1;Parent=gene-HP17_07067;Dbxref=NCBI_GP:EIE30202.1;Name=EIE30202.1;Note=COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase;gbkey=CDS;locus_tag=HP17_07067;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=EIE30202.1;transl_table=11 AIHX01000038.1 Genbank gene 1295 2503 . + . ID=gene-HP17_07072;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=HP17_07072 AIHX01000038.1 Genbank CDS 1295 2503 . + 0 ID=cds-EIE30203.1;Parent=gene-HP17_07072;Dbxref=NCBI_GP:EIE30203.1;Name=EIE30203.1;Note=COG0126 3-phosphoglycerate kinase;gbkey=CDS;gene=pgk;locus_tag=HP17_07072;product=phosphoglycerate kinase;protein_id=EIE30203.1;transl_table=11 AIHX01000038.1 Genbank gene 2519 3475 . + . ID=gene-HP17_07077;Name=HP17_07077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07077 AIHX01000038.1 Genbank CDS 2519 3475 . + 0 ID=cds-EIE30204.1;Parent=gene-HP17_07077;Dbxref=NCBI_GP:EIE30204.1;Name=EIE30204.1;Note=COG0598 Mg2+ and Co2+ transporters;gbkey=CDS;locus_tag=HP17_07077;product=magnesium and cobalt transport protein;protein_id=EIE30204.1;transl_table=11 AIHX01000038.1 Genbank gene 3482 4210 . + . ID=gene-HP17_07082;Name=HP17_07082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07082 AIHX01000038.1 Genbank CDS 3482 4210 . + 0 ID=cds-EIE30205.1;Parent=gene-HP17_07082;Dbxref=NCBI_GP:EIE30205.1;Name=EIE30205.1;Note=COG0861 Membrane protein TerC%2C possibly involved in tellurium resistance;gbkey=CDS;locus_tag=HP17_07082;product=Hypothetical protein;protein_id=EIE30205.1;transl_table=11 ##sequence-region AIHX01000039.1 1 851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000039.1 Genbank region 1 851 . + . ID=AIHX01000039.1:1..851;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000039.1 Genbank gene 1 851 . + . ID=gene-HP17_07087;Name=HP17_07087;end_range=851,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07087;partial=true AIHX01000039.1 Genbank CDS 1 851 . + 0 ID=cds-EIE30189.1;Parent=gene-HP17_07087;Dbxref=NCBI_GP:EIE30189.1;Name=EIE30189.1;end_range=851,.;gbkey=CDS;locus_tag=HP17_07087;partial=true;product=Alpha1%2C3-fucosyltransferase;protein_id=EIE30189.1;transl_table=11 ##sequence-region AIHX01000040.1 1 3620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000040.1 Genbank region 1 3620 . + . ID=AIHX01000040.1:1..3620;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000040.1 Genbank gene 1 1542 . + . ID=gene-HP17_07092;Name=HP17_07092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07092;partial=true;start_range=.,1 AIHX01000040.1 Genbank CDS 1 1542 . + 0 ID=cds-EIE30185.1;Parent=gene-HP17_07092;Dbxref=NCBI_GP:EIE30185.1;Name=EIE30185.1;gbkey=CDS;locus_tag=HP17_07092;partial=true;product=Hypothetical protein;protein_id=EIE30185.1;start_range=.,1;transl_table=11 AIHX01000040.1 Genbank gene 1569 1766 . + . ID=gene-HP17_07097;Name=HP17_07097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07097 AIHX01000040.1 Genbank CDS 1569 1766 . + 0 ID=cds-EIE30186.1;Parent=gene-HP17_07097;Dbxref=NCBI_GP:EIE30186.1;Name=EIE30186.1;gbkey=CDS;locus_tag=HP17_07097;product=Hypothetical protein;protein_id=EIE30186.1;transl_table=11 AIHX01000040.1 Genbank gene 1783 3060 . + . ID=gene-HP17_07102;Name=HP17_07102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07102 AIHX01000040.1 Genbank CDS 1783 3060 . + 0 ID=cds-EIE30187.1;Parent=gene-HP17_07102;Dbxref=NCBI_GP:EIE30187.1;Name=EIE30187.1;gbkey=CDS;locus_tag=HP17_07102;product=Hypothetical protein;protein_id=EIE30187.1;transl_table=11 AIHX01000040.1 Genbank gene 3064 3620 . + . ID=gene-HP17_07107;Name=HP17_07107;end_range=3620,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07107;partial=true AIHX01000040.1 Genbank CDS 3064 3620 . + 0 ID=cds-EIE30188.1;Parent=gene-HP17_07107;Dbxref=NCBI_GP:EIE30188.1;Name=EIE30188.1;end_range=3620,.;gbkey=CDS;locus_tag=HP17_07107;partial=true;product=Hypothetical protein;protein_id=EIE30188.1;transl_table=11 ##sequence-region AIHX01000041.1 1 675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000041.1 Genbank region 1 675 . + . ID=AIHX01000041.1:1..675;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000041.1 Genbank gene 365 675 . + . ID=gene-HP17_07112;Name=HP17_07112;end_range=675,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07112;partial=true AIHX01000041.1 Genbank CDS 365 675 . + 0 ID=cds-EIE30169.1;Parent=gene-HP17_07112;Dbxref=NCBI_GP:EIE30169.1;Name=EIE30169.1;end_range=675,.;gbkey=CDS;locus_tag=HP17_07112;partial=true;product=Hypothetical protein;protein_id=EIE30169.1;transl_table=11 ##sequence-region AIHX01000042.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000042.1 Genbank region 1 871 . + . ID=AIHX01000042.1:1..871;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000042.1 Genbank gene 275 871 . + . ID=gene-HP17_07117;Name=HP17_07117;end_range=871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07117;partial=true AIHX01000042.1 Genbank CDS 275 871 . + 0 ID=cds-EIE30141.1;Parent=gene-HP17_07117;Dbxref=NCBI_GP:EIE30141.1;Name=EIE30141.1;end_range=871,.;gbkey=CDS;locus_tag=HP17_07117;partial=true;product=Hypothetical protein;protein_id=EIE30141.1;transl_table=11 ##sequence-region AIHX01000043.1 1 3945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000043.1 Genbank region 1 3945 . + . ID=AIHX01000043.1:1..3945;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000043.1 Genbank gene 275 3151 . - . ID=gene-HP17_r07124;Name=HP17_r07124;gbkey=Gene;gene_biotype=rRNA;locus_tag=HP17_r07124 AIHX01000043.1 Genbank rRNA 275 3151 . - . ID=rna-HP17_r07124;Parent=gene-HP17_r07124;gbkey=rRNA;locus_tag=HP17_r07124;product=23S ribosomal RNA AIHX01000043.1 Genbank exon 275 3151 . - . ID=exon-HP17_r07124-1;Parent=rna-HP17_r07124;gbkey=rRNA;locus_tag=HP17_r07124;product=23S ribosomal RNA ##sequence-region AIHX01000044.1 1 360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000044.1 Genbank region 1 360 . + . ID=AIHX01000044.1:1..360;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000044.1 Genbank gene 1 360 . - . ID=gene-HP17_00711;Name=ureB;end_range=360,.;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=HP17_00711;partial=true;start_range=.,1 AIHX01000044.1 Genbank CDS 1 360 . - 2 ID=cds-EIE30128.1;Parent=gene-HP17_00711;Dbxref=NCBI_GP:EIE30128.1;Name=EIE30128.1;Note=COG0804 Urea amidohydrolase (urease) alpha subunit;end_range=360,.;gbkey=CDS;gene=ureB;locus_tag=HP17_00711;partial=true;product=urease subunit beta;protein_id=EIE30128.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000045.1 1 9619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000045.1 Genbank region 1 9619 . + . ID=AIHX01000045.1:1..9619;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000045.1 Genbank gene 1 135 . + . ID=gene-HP17_07124;Name=HP17_07124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07124;partial=true;start_range=.,1 AIHX01000045.1 Genbank CDS 1 135 . + 0 ID=cds-EIE30118.1;Parent=gene-HP17_07124;Dbxref=NCBI_GP:EIE30118.1;Name=EIE30118.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_07124;partial=true;product=Hypothetical protein;protein_id=EIE30118.1;start_range=.,1;transl_table=11 AIHX01000045.1 Genbank gene 246 1643 . - . ID=gene-HP17_07129;Name=HP17_07129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07129 AIHX01000045.1 Genbank CDS 246 1643 . - 0 ID=cds-EIE30119.1;Parent=gene-HP17_07129;Dbxref=NCBI_GP:EIE30119.1;Name=EIE30119.1;gbkey=CDS;locus_tag=HP17_07129;product=outer membrane protein HofD;protein_id=EIE30119.1;transl_table=11 AIHX01000045.1 Genbank gene 1716 3302 . - . ID=gene-HP17_07134;Name=HP17_07134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07134 AIHX01000045.1 Genbank CDS 1716 3302 . - 0 ID=cds-EIE30120.1;Parent=gene-HP17_07134;Dbxref=NCBI_GP:EIE30120.1;Name=EIE30120.1;gbkey=CDS;locus_tag=HP17_07134;product=outer membrane protein HofC;protein_id=EIE30120.1;transl_table=11 AIHX01000045.1 Genbank gene 3580 4524 . + . ID=gene-HP17_07139;Name=HP17_07139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07139 AIHX01000045.1 Genbank CDS 3580 4524 . + 0 ID=cds-EIE30121.1;Parent=gene-HP17_07139;Dbxref=NCBI_GP:EIE30121.1;Name=EIE30121.1;Note=COG0753 Catalase;gbkey=CDS;locus_tag=HP17_07139;product=catalase-like protein;protein_id=EIE30121.1;transl_table=11 AIHX01000045.1 Genbank pseudogene 4758 5508 . - . ID=gene-HP17_07144;Name=HP17_07144;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_07144;pseudo=true AIHX01000045.1 Genbank sequence_feature 4758 5508 . - . ID=id-HP17_07144;Note=potential frameshift: common BLAST hit: gi|254779149|ref|YP_003057254.1| non-functional type II restriction endonuclease;gbkey=misc_feature;locus_tag=HP17_07144;pseudo=true AIHX01000045.1 Genbank gene 5510 6556 . - . ID=gene-HP17_07154;Name=HP17_07154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07154 AIHX01000045.1 Genbank CDS 5510 6556 . - 0 ID=cds-EIE30122.1;Parent=gene-HP17_07154;Dbxref=NCBI_GP:EIE30122.1;Name=EIE30122.1;Note=COG0270 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_07154;product=type II DNA modification enzyme;protein_id=EIE30122.1;transl_table=11 AIHX01000045.1 Genbank gene 6655 7200 . - . ID=gene-HP17_07159;Name=HP17_07159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07159 AIHX01000045.1 Genbank CDS 6655 7200 . - 0 ID=cds-EIE30123.1;Parent=gene-HP17_07159;Dbxref=NCBI_GP:EIE30123.1;Name=EIE30123.1;gbkey=CDS;locus_tag=HP17_07159;product=type II restriction endonuclease;protein_id=EIE30123.1;transl_table=11 AIHX01000045.1 Genbank gene 7272 8201 . - . ID=gene-HP17_07164;Name=HP17_07164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07164 AIHX01000045.1 Genbank CDS 7272 8201 . - 0 ID=cds-EIE30124.1;Parent=gene-HP17_07164;Dbxref=NCBI_GP:EIE30124.1;Name=EIE30124.1;Note=COG0338 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_07164;product=type II DNA modification enzyme (methyltransferase);protein_id=EIE30124.1;transl_table=11 AIHX01000045.1 Genbank gene 8217 9619 . - . ID=gene-HP17_07169;Name=HP17_07169;end_range=9619,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07169;partial=true AIHX01000045.1 Genbank CDS 8217 9619 . - 2 ID=cds-EIE30125.1;Parent=gene-HP17_07169;Dbxref=NCBI_GP:EIE30125.1;Name=EIE30125.1;Note=COG1217 Predicted membrane GTPase involved in stress response;end_range=9619,.;gbkey=CDS;locus_tag=HP17_07169;partial=true;product=GTP-binding protein TypA;protein_id=EIE30125.1;transl_table=11 ##sequence-region AIHX01000046.1 1 2893 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000046.1 Genbank region 1 2893 . + . ID=AIHX01000046.1:1..2893;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000046.1 Genbank gene 1 362 . - . ID=gene-HP17_07174;Name=HP17_07174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07174;partial=true;start_range=.,1 AIHX01000046.1 Genbank CDS 1 362 . - 0 ID=cds-EIE30114.1;Parent=gene-HP17_07174;Dbxref=NCBI_GP:EIE30114.1;Name=EIE30114.1;Note=COG1217 Predicted membrane GTPase involved in stress response;gbkey=CDS;locus_tag=HP17_07174;partial=true;product=GTP-binding protein TypA;protein_id=EIE30114.1;start_range=.,1;transl_table=11 AIHX01000046.1 Genbank gene 408 1256 . - . ID=gene-HP17_07179;Name=HP17_07179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07179 AIHX01000046.1 Genbank CDS 408 1256 . - 0 ID=cds-EIE30115.1;Parent=gene-HP17_07179;Dbxref=NCBI_GP:EIE30115.1;Name=EIE30115.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_07179;product=Hypothetical protein;protein_id=EIE30115.1;transl_table=11 AIHX01000046.1 Genbank gene 1222 2859 . - . ID=gene-HP17_07184;Name=HP17_07184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07184 AIHX01000046.1 Genbank CDS 1222 2859 . - 0 ID=cds-EIE30116.1;Parent=gene-HP17_07184;Dbxref=NCBI_GP:EIE30116.1;Name=EIE30116.1;Note=COG0286 Type I restriction-modification system methyltransferase subunit;gbkey=CDS;locus_tag=HP17_07184;product=type II adenine specific methyltransferase;protein_id=EIE30116.1;transl_table=11 ##sequence-region AIHX01000047.1 1 14819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000047.1 Genbank region 1 14819 . + . ID=AIHX01000047.1:1..14819;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000047.1 Genbank gene 1 1774 . + . ID=gene-HP17_07189;Name=HP17_07189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07189;partial=true;start_range=.,1 AIHX01000047.1 Genbank CDS 1 1774 . + 1 ID=cds-EIE30099.1;Parent=gene-HP17_07189;Dbxref=NCBI_GP:EIE30099.1;Name=EIE30099.1;Note=COG1479 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_07189;partial=true;product=Hypothetical protein;protein_id=EIE30099.1;start_range=.,1;transl_table=11 AIHX01000047.1 Genbank gene 1815 3068 . + . ID=gene-HP17_07194;Name=HP17_07194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07194 AIHX01000047.1 Genbank CDS 1815 3068 . + 0 ID=cds-EIE30100.1;Parent=gene-HP17_07194;Dbxref=NCBI_GP:EIE30100.1;Name=EIE30100.1;Note=COG0608 Single-stranded DNA-specific exonuclease;gbkey=CDS;locus_tag=HP17_07194;product=Hypothetical protein;protein_id=EIE30100.1;transl_table=11 AIHX01000047.1 Genbank gene 5078 6007 . + . ID=gene-HP17_07209;Name=HP17_07209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07209 AIHX01000047.1 Genbank CDS 5078 6007 . + 0 ID=cds-EIE30101.1;Parent=gene-HP17_07209;Dbxref=NCBI_GP:EIE30101.1;Name=EIE30101.1;gbkey=CDS;locus_tag=HP17_07209;product=Hypothetical protein;protein_id=EIE30101.1;transl_table=11 AIHX01000047.1 Genbank gene 6111 7958 . - . ID=gene-HP17_07214;Name=HP17_07214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07214 AIHX01000047.1 Genbank CDS 6111 7958 . - 0 ID=cds-EIE30102.1;Parent=gene-HP17_07214;Dbxref=NCBI_GP:EIE30102.1;Name=EIE30102.1;Note=COG1166 Arginine decarboxylase (spermidine biosynthesis);gbkey=CDS;locus_tag=HP17_07214;product=arginine decarboxylase;protein_id=EIE30102.1;transl_table=11 AIHX01000047.1 Genbank gene 7973 8812 . - . ID=gene-HP17_07219;Name=HP17_07219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07219 AIHX01000047.1 Genbank CDS 7973 8812 . - 0 ID=cds-EIE30103.1;Parent=gene-HP17_07219;Dbxref=NCBI_GP:EIE30103.1;Name=EIE30103.1;Note=COG0438 Glycosyltransferase;gbkey=CDS;locus_tag=HP17_07219;product=polysaccharide biosynthesis protein;protein_id=EIE30103.1;transl_table=11 AIHX01000047.1 Genbank gene 8827 9141 . - . ID=gene-HP17_07224;Name=HP17_07224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07224 AIHX01000047.1 Genbank CDS 8827 9141 . - 0 ID=cds-EIE30104.1;Parent=gene-HP17_07224;Dbxref=NCBI_GP:EIE30104.1;Name=EIE30104.1;Note=COG0438 Glycosyltransferase;gbkey=CDS;locus_tag=HP17_07224;product=type 1 capsular polysaccharide biosynthesis protein J;protein_id=EIE30104.1;transl_table=11 AIHX01000047.1 Genbank gene 9146 9574 . - . ID=gene-HP17_07229;Name=HP17_07229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07229 AIHX01000047.1 Genbank CDS 9146 9574 . - 0 ID=cds-EIE30105.1;Parent=gene-HP17_07229;Dbxref=NCBI_GP:EIE30105.1;Name=EIE30105.1;Note=COG2050 Uncharacterized protein%2C possibly involved in aromatic compounds catabolism;gbkey=CDS;locus_tag=HP17_07229;product=Hypothetical protein;protein_id=EIE30105.1;transl_table=11 AIHX01000047.1 Genbank gene 9590 10375 . - . ID=gene-HP17_07234;Name=HP17_07234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07234 AIHX01000047.1 Genbank CDS 9590 10375 . - 0 ID=cds-EIE30106.1;Parent=gene-HP17_07234;Dbxref=NCBI_GP:EIE30106.1;Name=EIE30106.1;Note=COG0500 SAM-dependent methyltransferases;gbkey=CDS;locus_tag=HP17_07234;product=tRNA mo(5)U34 methyltransferase;protein_id=EIE30106.1;transl_table=11 AIHX01000047.1 Genbank gene 10379 11398 . - . ID=gene-HP17_07239;Name=HP17_07239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07239 AIHX01000047.1 Genbank CDS 10379 11398 . - 0 ID=cds-EIE30107.1;Parent=gene-HP17_07239;Dbxref=NCBI_GP:EIE30107.1;Name=EIE30107.1;gbkey=CDS;locus_tag=HP17_07239;product=Hypothetical protein;protein_id=EIE30107.1;transl_table=11 AIHX01000047.1 Genbank gene 11399 13345 . - . ID=gene-HP17_07244;Name=HP17_07244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07244 AIHX01000047.1 Genbank CDS 11399 13345 . - 0 ID=cds-EIE30108.1;Parent=gene-HP17_07244;Dbxref=NCBI_GP:EIE30108.1;Name=EIE30108.1;Note=COG0143 Methionyl-tRNA synthetase;gbkey=CDS;locus_tag=HP17_07244;product=methionyl-tRNA synthetase;protein_id=EIE30108.1;transl_table=11 AIHX01000047.1 Genbank gene 13514 14683 . + . ID=gene-HP17_07249;Name=HP17_07249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07249 AIHX01000047.1 Genbank CDS 13514 14683 . + 0 ID=cds-EIE30109.1;Parent=gene-HP17_07249;Dbxref=NCBI_GP:EIE30109.1;Name=EIE30109.1;Note=COG2230 Cyclopropane fatty acid synthase and related methyltransferases;gbkey=CDS;locus_tag=HP17_07249;product=cyclopropane fatty acid synthase;protein_id=EIE30109.1;transl_table=11 AIHX01000047.1 Genbank gene 14686 14819 . - . ID=gene-HP17_07254;Name=HP17_07254;end_range=14819,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07254;partial=true AIHX01000047.1 Genbank CDS 14686 14819 . - 2 ID=cds-EIE30110.1;Parent=gene-HP17_07254;Dbxref=NCBI_GP:EIE30110.1;Name=EIE30110.1;Note=COG0668 Small-conductance mechanosensitive channel;end_range=14819,.;gbkey=CDS;locus_tag=HP17_07254;partial=true;product=Hypothetical protein;protein_id=EIE30110.1;transl_table=11 ##sequence-region AIHX01000048.1 1 11632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000048.1 Genbank region 1 11632 . + . ID=AIHX01000048.1:1..11632;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000048.1 Genbank gene 1 1723 . - . ID=gene-HP17_07259;Name=HP17_07259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07259;partial=true;start_range=.,1 AIHX01000048.1 Genbank CDS 1 1723 . - 0 ID=cds-EIE30088.1;Parent=gene-HP17_07259;Dbxref=NCBI_GP:EIE30088.1;Name=EIE30088.1;Note=COG0668 Small-conductance mechanosensitive channel;gbkey=CDS;locus_tag=HP17_07259;partial=true;product=Hypothetical protein;protein_id=EIE30088.1;start_range=.,1;transl_table=11 AIHX01000048.1 Genbank gene 2319 2395 . - . ID=gene-HP17_t07311;Name=HP17_t07311;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t07311 AIHX01000048.1 Genbank tRNA 2319 2395 . - . ID=rna-HP17_t07311;Parent=gene-HP17_t07311;gbkey=tRNA;locus_tag=HP17_t07311;product=tRNA-Arg AIHX01000048.1 Genbank exon 2319 2395 . - . ID=exon-HP17_t07311-1;Parent=rna-HP17_t07311;gbkey=tRNA;locus_tag=HP17_t07311;product=tRNA-Arg AIHX01000048.1 Genbank gene 2413 2489 . - . ID=gene-HP17_t07313;Name=HP17_t07313;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t07313 AIHX01000048.1 Genbank tRNA 2413 2489 . - . ID=rna-HP17_t07313;Parent=gene-HP17_t07313;gbkey=tRNA;locus_tag=HP17_t07313;product=tRNA-Arg AIHX01000048.1 Genbank exon 2413 2489 . - . ID=exon-HP17_t07313-1;Parent=rna-HP17_t07313;gbkey=tRNA;locus_tag=HP17_t07313;product=tRNA-Arg AIHX01000048.1 Genbank gene 2549 2625 . - . ID=gene-HP17_t07315;Name=HP17_t07315;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t07315 AIHX01000048.1 Genbank tRNA 2549 2625 . - . ID=rna-HP17_t07315;Parent=gene-HP17_t07315;gbkey=tRNA;locus_tag=HP17_t07315;product=tRNA-His AIHX01000048.1 Genbank exon 2549 2625 . - . ID=exon-HP17_t07315-1;Parent=rna-HP17_t07315;gbkey=tRNA;locus_tag=HP17_t07315;product=tRNA-His AIHX01000048.1 Genbank gene 2693 2770 . - . ID=gene-HP17_t07317;Name=HP17_t07317;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t07317 AIHX01000048.1 Genbank tRNA 2693 2770 . - . ID=rna-HP17_t07317;Parent=gene-HP17_t07317;gbkey=tRNA;locus_tag=HP17_t07317;product=tRNA-Pro AIHX01000048.1 Genbank exon 2693 2770 . - . ID=exon-HP17_t07317-1;Parent=rna-HP17_t07317;gbkey=tRNA;locus_tag=HP17_t07317;product=tRNA-Pro AIHX01000048.1 Genbank gene 2955 3704 . - . ID=gene-HP17_07264;Name=HP17_07264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07264 AIHX01000048.1 Genbank CDS 2955 3704 . - 0 ID=cds-EIE30089.1;Parent=gene-HP17_07264;Dbxref=NCBI_GP:EIE30089.1;Name=EIE30089.1;gbkey=CDS;locus_tag=HP17_07264;product=putative neuraminyllactose-binding hemagglutinin-like protein;protein_id=EIE30089.1;transl_table=11 AIHX01000048.1 Genbank gene 3691 3801 . - . ID=gene-HP17_07269;Name=HP17_07269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07269 AIHX01000048.1 Genbank CDS 3691 3801 . - 0 ID=cds-EIE30090.1;Parent=gene-HP17_07269;Dbxref=NCBI_GP:EIE30090.1;Name=EIE30090.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_07269;product=Hypothetical protein;protein_id=EIE30090.1;transl_table=11 AIHX01000048.1 Genbank gene 3788 5314 . - . ID=gene-HP17_07274;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HP17_07274 AIHX01000048.1 Genbank CDS 3788 5314 . - 0 ID=cds-EIE30091.1;Parent=gene-HP17_07274;Dbxref=NCBI_GP:EIE30091.1;Name=EIE30091.1;Note=COG0518 GMP synthase - Glutamine amidotransferase domain;gbkey=CDS;gene=guaA;locus_tag=HP17_07274;product=GMP synthase;protein_id=EIE30091.1;transl_table=11 AIHX01000048.1 Genbank gene 5325 5813 . - . ID=gene-HP17_07279;Name=HP17_07279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07279 AIHX01000048.1 Genbank CDS 5325 5813 . - 0 ID=cds-EIE30092.1;Parent=gene-HP17_07279;Dbxref=NCBI_GP:EIE30092.1;Name=EIE30092.1;gbkey=CDS;locus_tag=HP17_07279;product=Hypothetical protein;protein_id=EIE30092.1;transl_table=11 AIHX01000048.1 Genbank gene 5959 8349 . - . ID=gene-HP17_07284;Name=HP17_07284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07284 AIHX01000048.1 Genbank CDS 5959 8349 . - 0 ID=cds-EIE30093.1;Parent=gene-HP17_07284;Dbxref=NCBI_GP:EIE30093.1;Name=EIE30093.1;Note=COG0243 Anaerobic dehydrogenases%2C typically selenocysteine-containing;gbkey=CDS;locus_tag=HP17_07284;product=biotin sulfoxide reductase;protein_id=EIE30093.1;transl_table=11 AIHX01000048.1 Genbank gene 8454 9044 . - . ID=gene-HP17_07289;Name=HP17_07289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07289 AIHX01000048.1 Genbank CDS 8454 9044 . - 0 ID=cds-EIE30094.1;Parent=gene-HP17_07289;Dbxref=NCBI_GP:EIE30094.1;Name=EIE30094.1;gbkey=CDS;locus_tag=HP17_07289;product=Hypothetical protein;protein_id=EIE30094.1;transl_table=11 AIHX01000048.1 Genbank gene 9070 10392 . - . ID=gene-HP17_07294;Name=HP17_07294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07294 AIHX01000048.1 Genbank CDS 9070 10392 . - 0 ID=cds-EIE30095.1;Parent=gene-HP17_07294;Dbxref=NCBI_GP:EIE30095.1;Name=EIE30095.1;Note=COG0520 Selenocysteine lyase;gbkey=CDS;locus_tag=HP17_07294;product=cysteine desulfurase;protein_id=EIE30095.1;transl_table=11 AIHX01000048.1 Genbank gene 10411 10725 . - . ID=gene-HP17_07299;Name=HP17_07299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07299 AIHX01000048.1 Genbank CDS 10411 10725 . - 0 ID=cds-EIE30096.1;Parent=gene-HP17_07299;Dbxref=NCBI_GP:EIE30096.1;Name=EIE30096.1;Note=COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases;gbkey=CDS;locus_tag=HP17_07299;product=ADP hydrolase;protein_id=EIE30096.1;transl_table=11 AIHX01000048.1 Genbank gene 10806 11632 . + . ID=gene-HP17_07304;Name=pheS;end_range=11632,.;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=HP17_07304;partial=true AIHX01000048.1 Genbank CDS 10806 11632 . + 0 ID=cds-EIE30097.1;Parent=gene-HP17_07304;Dbxref=NCBI_GP:EIE30097.1;Name=EIE30097.1;Note=COG0016 Phenylalanyl-tRNA synthetase alpha subunit;end_range=11632,.;gbkey=CDS;gene=pheS;locus_tag=HP17_07304;partial=true;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=EIE30097.1;transl_table=11 ##sequence-region AIHX01000049.1 1 25727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000049.1 Genbank region 1 25727 . + . ID=AIHX01000049.1:1..25727;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000049.1 Genbank gene 1 139 . + . ID=gene-HP17_07317;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=HP17_07317;partial=true;start_range=.,1 AIHX01000049.1 Genbank CDS 1 139 . + 1 ID=cds-EIE30059.1;Parent=gene-HP17_07317;Dbxref=NCBI_GP:EIE30059.1;Name=EIE30059.1;Note=COG0016 Phenylalanyl-tRNA synthetase alpha subunit;gbkey=CDS;gene=pheS;locus_tag=HP17_07317;partial=true;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=EIE30059.1;start_range=.,1;transl_table=11 AIHX01000049.1 Genbank gene 139 2433 . + . ID=gene-HP17_07322;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=HP17_07322 AIHX01000049.1 Genbank CDS 139 2433 . + 0 ID=cds-EIE30060.1;Parent=gene-HP17_07322;Dbxref=NCBI_GP:EIE30060.1;Name=EIE30060.1;Note=COG0073 EMAP domain;gbkey=CDS;gene=pheT;locus_tag=HP17_07322;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=EIE30060.1;transl_table=11 AIHX01000049.1 Genbank gene 2454 3743 . + . ID=gene-HP17_07327;Name=HP17_07327;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07327 AIHX01000049.1 Genbank CDS 2454 3743 . + 0 ID=cds-EIE30061.1;Parent=gene-HP17_07327;Dbxref=NCBI_GP:EIE30061.1;Name=EIE30061.1;Note=COG0128 5-enolpyruvylshikimate-3-phosphate synthase;gbkey=CDS;locus_tag=HP17_07327;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=EIE30061.1;transl_table=11 AIHX01000049.1 Genbank gene 3733 4557 . + . ID=gene-HP17_07332;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HP17_07332 AIHX01000049.1 Genbank CDS 3733 4557 . + 0 ID=cds-EIE30062.1;Parent=gene-HP17_07332;Dbxref=NCBI_GP:EIE30062.1;Name=EIE30062.1;Note=COG0761 Penicillin tolerance protein;gbkey=CDS;gene=ispH;locus_tag=HP17_07332;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=EIE30062.1;transl_table=11 AIHX01000049.1 Genbank gene 4678 6348 . + . ID=gene-HP17_07337;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=HP17_07337 AIHX01000049.1 Genbank CDS 4678 6348 . + 0 ID=cds-EIE30063.1;Parent=gene-HP17_07337;Dbxref=NCBI_GP:EIE30063.1;Name=EIE30063.1;Note=COG0539 Ribosomal protein S1;gbkey=CDS;gene=rpsA;locus_tag=HP17_07337;product=30S ribosomal protein S1;protein_id=EIE30063.1;transl_table=11 AIHX01000049.1 Genbank gene 6377 6925 . + . ID=gene-HP17_07342;Name=HP17_07342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07342 AIHX01000049.1 Genbank CDS 6377 6925 . + 0 ID=cds-EIE30064.1;Parent=gene-HP17_07342;Dbxref=NCBI_GP:EIE30064.1;Name=EIE30064.1;gbkey=CDS;locus_tag=HP17_07342;product=Hypothetical protein;protein_id=EIE30064.1;transl_table=11 AIHX01000049.1 Genbank gene 6941 8515 . + . ID=gene-HP17_07347;Name=HP17_07347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07347 AIHX01000049.1 Genbank CDS 6941 8515 . + 0 ID=cds-EIE30065.1;Parent=gene-HP17_07347;Dbxref=NCBI_GP:EIE30065.1;Name=EIE30065.1;Note=COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases;gbkey=CDS;locus_tag=HP17_07347;product=D-3-phosphoglycerate dehydrogenase;protein_id=EIE30065.1;transl_table=11 AIHX01000049.1 Genbank gene 8525 10375 . + . ID=gene-HP17_07352;Name=HP17_07352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07352 AIHX01000049.1 Genbank CDS 8525 10375 . + 0 ID=cds-EIE30066.1;Parent=gene-HP17_07352;Dbxref=NCBI_GP:EIE30066.1;Name=EIE30066.1;Note=COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases;gbkey=CDS;locus_tag=HP17_07352;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=EIE30066.1;transl_table=11 AIHX01000049.1 Genbank gene 10398 11066 . + . ID=gene-HP17_07357;Name=HP17_07357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07357 AIHX01000049.1 Genbank CDS 10398 11066 . + 0 ID=cds-EIE30067.1;Parent=gene-HP17_07357;Dbxref=NCBI_GP:EIE30067.1;Name=EIE30067.1;Note=COG0325 Predicted enzyme with a TIM-barrel fold;gbkey=CDS;locus_tag=HP17_07357;product=Hypothetical protein;protein_id=EIE30067.1;transl_table=11 AIHX01000049.1 Genbank gene 11068 11826 . + . ID=gene-HP17_07362;Name=HP17_07362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07362 AIHX01000049.1 Genbank CDS 11068 11826 . + 0 ID=cds-EIE30068.1;Parent=gene-HP17_07362;Dbxref=NCBI_GP:EIE30068.1;Name=EIE30068.1;Note=COG2908 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_07362;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=EIE30068.1;transl_table=11 AIHX01000049.1 Genbank gene 11830 12765 . + . ID=gene-HP17_07367;Name=HP17_07367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07367 AIHX01000049.1 Genbank CDS 11830 12765 . + 0 ID=cds-EIE30069.1;Parent=gene-HP17_07367;Dbxref=NCBI_GP:EIE30069.1;Name=EIE30069.1;Note=COG0835 Chemotaxis signal transduction protein;gbkey=CDS;locus_tag=HP17_07367;product=CheA-MCP interaction modulator;protein_id=EIE30069.1;transl_table=11 AIHX01000049.1 Genbank gene 12821 15235 . + . ID=gene-HP17_07372;Name=HP17_07372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07372 AIHX01000049.1 Genbank CDS 12821 15235 . + 0 ID=cds-EIE30070.1;Parent=gene-HP17_07372;Dbxref=NCBI_GP:EIE30070.1;Name=EIE30070.1;Note=COG0643 Chemotaxis protein histidine kinase and related kinases;gbkey=CDS;locus_tag=HP17_07372;product=autophosphorylating histidine kinase;protein_id=EIE30070.1;transl_table=11 AIHX01000049.1 Genbank gene 15232 15729 . + . ID=gene-HP17_07377;Name=HP17_07377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07377 AIHX01000049.1 Genbank CDS 15232 15729 . + 0 ID=cds-EIE30071.1;Parent=gene-HP17_07377;Dbxref=NCBI_GP:EIE30071.1;Name=EIE30071.1;Note=COG0835 Chemotaxis signal transduction protein;gbkey=CDS;locus_tag=HP17_07377;product=purine-binding chemotaxis protein CheW;protein_id=EIE30071.1;transl_table=11 AIHX01000049.1 Genbank gene 15988 16488 . - . ID=gene-HP17_07382;Name=HP17_07382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07382 AIHX01000049.1 Genbank CDS 15988 16488 . - 0 ID=cds-EIE30072.1;Parent=gene-HP17_07382;Dbxref=NCBI_GP:EIE30072.1;Name=EIE30072.1;Note=COG2077 Peroxiredoxin;gbkey=CDS;locus_tag=HP17_07382;product=adhesin-thiol peroxidase;protein_id=EIE30072.1;transl_table=11 AIHX01000049.1 Genbank gene 16712 17353 . + . ID=gene-HP17_07387;Name=HP17_07387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07387 AIHX01000049.1 Genbank CDS 16712 17353 . + 0 ID=cds-EIE30073.1;Parent=gene-HP17_07387;Dbxref=NCBI_GP:EIE30073.1;Name=EIE30073.1;Note=COG0605 Superoxide dismutase;gbkey=CDS;locus_tag=HP17_07387;product=superoxide dismutase;protein_id=EIE30073.1;transl_table=11 AIHX01000049.1 Genbank gene 17405 18124 . + . ID=gene-HP17_07392;Name=HP17_07392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07392 AIHX01000049.1 Genbank CDS 17405 18124 . + 0 ID=cds-EIE30074.1;Parent=gene-HP17_07392;Dbxref=NCBI_GP:EIE30074.1;Name=EIE30074.1;Note=COG0500 SAM-dependent methyltransferases;gbkey=CDS;locus_tag=HP17_07392;product=Hypothetical protein;protein_id=EIE30074.1;transl_table=11 AIHX01000049.1 Genbank gene 18165 20024 . - . ID=gene-HP17_07397;Name=HP17_07397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07397 AIHX01000049.1 Genbank CDS 18165 20024 . - 0 ID=cds-EIE30075.1;Parent=gene-HP17_07397;Dbxref=NCBI_GP:EIE30075.1;Name=EIE30075.1;Note=COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase;gbkey=CDS;locus_tag=HP17_07397;product=primosome assembly protein PriA;protein_id=EIE30075.1;transl_table=11 AIHX01000049.1 Genbank gene 20009 20245 . - . ID=gene-HP17_07402;Name=HP17_07402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07402 AIHX01000049.1 Genbank CDS 20009 20245 . - 0 ID=cds-EIE30076.1;Parent=gene-HP17_07402;Dbxref=NCBI_GP:EIE30076.1;Name=EIE30076.1;gbkey=CDS;locus_tag=HP17_07402;product=Hypothetical protein;protein_id=EIE30076.1;transl_table=11 AIHX01000049.1 Genbank gene 20258 20485 . - . ID=gene-HP17_07407;Name=HP17_07407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07407 AIHX01000049.1 Genbank CDS 20258 20485 . - 0 ID=cds-EIE30077.1;Parent=gene-HP17_07407;Dbxref=NCBI_GP:EIE30077.1;Name=EIE30077.1;Note=COG0055 F0F1-type ATP synthase%2C beta subunit;gbkey=CDS;locus_tag=HP17_07407;product=Hypothetical protein;protein_id=EIE30077.1;transl_table=11 AIHX01000049.1 Genbank gene 20667 21413 . + . ID=gene-HP17_07412;Name=HP17_07412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07412 AIHX01000049.1 Genbank CDS 20667 21413 . + 0 ID=cds-EIE30078.1;Parent=gene-HP17_07412;Dbxref=NCBI_GP:EIE30078.1;Name=EIE30078.1;gbkey=CDS;locus_tag=HP17_07412;product=Hypothetical protein;protein_id=EIE30078.1;transl_table=11 AIHX01000049.1 Genbank gene 21456 21980 . - . ID=gene-HP17_07417;Name=HP17_07417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07417 AIHX01000049.1 Genbank CDS 21456 21980 . - 0 ID=cds-EIE30079.1;Parent=gene-HP17_07417;Dbxref=NCBI_GP:EIE30079.1;Name=EIE30079.1;gbkey=CDS;locus_tag=HP17_07417;product=Hypothetical protein;protein_id=EIE30079.1;transl_table=11 AIHX01000049.1 Genbank gene 21946 22053 . + . ID=gene-HP17_07422;Name=HP17_07422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07422 AIHX01000049.1 Genbank CDS 21946 22053 . + 0 ID=cds-EIE30080.1;Parent=gene-HP17_07422;Dbxref=NCBI_GP:EIE30080.1;Name=EIE30080.1;gbkey=CDS;locus_tag=HP17_07422;product=Hypothetical protein;protein_id=EIE30080.1;transl_table=11 AIHX01000049.1 Genbank gene 22159 23382 . + . ID=gene-HP17_07427;Name=HP17_07427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07427 AIHX01000049.1 Genbank CDS 22159 23382 . + 0 ID=cds-EIE30081.1;Parent=gene-HP17_07427;Dbxref=NCBI_GP:EIE30081.1;Name=EIE30081.1;Note=COG0501 Zn-dependent protease with chaperone function;gbkey=CDS;locus_tag=HP17_07427;product=metalloprotease;protein_id=EIE30081.1;transl_table=11 AIHX01000049.1 Genbank gene 23379 24209 . + . ID=gene-HP17_07432;Name=HP17_07432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07432 AIHX01000049.1 Genbank CDS 23379 24209 . + 0 ID=cds-EIE30082.1;Parent=gene-HP17_07432;Dbxref=NCBI_GP:EIE30082.1;Name=EIE30082.1;Note=COG2890 Methylase of polypeptide chain release factors;gbkey=CDS;locus_tag=HP17_07432;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=EIE30082.1;transl_table=11 AIHX01000049.1 Genbank gene 24276 25622 . + . ID=gene-HP17_07437;Name=HP17_07437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07437 AIHX01000049.1 Genbank CDS 24276 25622 . + 0 ID=cds-EIE30083.1;Parent=gene-HP17_07437;Dbxref=NCBI_GP:EIE30083.1;Name=EIE30083.1;Note=COG0334 Glutamate dehydrogenase/leucine dehydrogenase;gbkey=CDS;locus_tag=HP17_07437;product=glutamate dehydrogenase;protein_id=EIE30083.1;transl_table=11 ##sequence-region AIHX01000050.1 1 19566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000050.1 Genbank region 1 19566 . + . ID=AIHX01000050.1:1..19566;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000050.1 Genbank gene 1 661 . + . ID=gene-HP17_07442;Name=HP17_07442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07442;partial=true;start_range=.,1 AIHX01000050.1 Genbank CDS 1 661 . + 1 ID=cds-EIE30032.1;Parent=gene-HP17_07442;Dbxref=NCBI_GP:EIE30032.1;Name=EIE30032.1;gbkey=CDS;locus_tag=HP17_07442;partial=true;product=Hypothetical protein;protein_id=EIE30032.1;start_range=.,1;transl_table=11 AIHX01000050.1 Genbank gene 874 2010 . - . ID=gene-HP17_07447;Name=HP17_07447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07447 AIHX01000050.1 Genbank CDS 874 2010 . - 0 ID=cds-EIE30033.1;Parent=gene-HP17_07447;Dbxref=NCBI_GP:EIE30033.1;Name=EIE30033.1;Note=COG1226 Kef-type K+ transport systems%2C predicted NAD-binding component;gbkey=CDS;locus_tag=HP17_07447;product=putative potassium channel protein;protein_id=EIE30033.1;transl_table=11 AIHX01000050.1 Genbank gene 2191 2379 . - . ID=gene-HP17_07452;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HP17_07452 AIHX01000050.1 Genbank CDS 2191 2379 . - 0 ID=cds-EIE30034.1;Parent=gene-HP17_07452;Dbxref=NCBI_GP:EIE30034.1;Name=EIE30034.1;Note=COG0227 Ribosomal protein L28;gbkey=CDS;gene=rpmB;locus_tag=HP17_07452;product=50S ribosomal protein L28;protein_id=EIE30034.1;transl_table=11 AIHX01000050.1 Genbank gene 2479 3321 . - . ID=gene-HP17_07457;Name=HP17_07457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07457 AIHX01000050.1 Genbank CDS 2479 3321 . - 0 ID=cds-EIE30035.1;Parent=gene-HP17_07457;Dbxref=NCBI_GP:EIE30035.1;Name=EIE30035.1;gbkey=CDS;locus_tag=HP17_07457;product=flagellar sheath adhesin;protein_id=EIE30035.1;transl_table=11 AIHX01000050.1 Genbank gene 3437 4498 . + . ID=gene-HP17_07462;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=HP17_07462 AIHX01000050.1 Genbank CDS 3437 4498 . + 0 ID=cds-EIE30036.1;Parent=gene-HP17_07462;Dbxref=NCBI_GP:EIE30036.1;Name=EIE30036.1;Note=COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase;gbkey=CDS;gene=mraY;locus_tag=HP17_07462;product=phospho-N-acetylmuramoyl-pentapeptide- transferase;protein_id=EIE30036.1;transl_table=11 AIHX01000050.1 Genbank gene 4500 5768 . + . ID=gene-HP17_07467;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HP17_07467 AIHX01000050.1 Genbank CDS 4500 5768 . + 0 ID=cds-EIE30037.1;Parent=gene-HP17_07467;Dbxref=NCBI_GP:EIE30037.1;Name=EIE30037.1;Note=COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase;gbkey=CDS;gene=murD;locus_tag=HP17_07467;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=EIE30037.1;transl_table=11 AIHX01000050.1 Genbank gene 5765 6025 . - . ID=gene-HP17_07472;Name=HP17_07472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07472 AIHX01000050.1 Genbank CDS 5765 6025 . - 0 ID=cds-EIE30038.1;Parent=gene-HP17_07472;Dbxref=NCBI_GP:EIE30038.1;Name=EIE30038.1;gbkey=CDS;locus_tag=HP17_07472;product=Hypothetical protein;protein_id=EIE30038.1;transl_table=11 AIHX01000050.1 Genbank gene 6015 6416 . - . ID=gene-HP17_07477;Name=HP17_07477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07477 AIHX01000050.1 Genbank CDS 6015 6416 . - 0 ID=cds-EIE30039.1;Parent=gene-HP17_07477;Dbxref=NCBI_GP:EIE30039.1;Name=EIE30039.1;Note=COG0824 Predicted thioesterase;gbkey=CDS;locus_tag=HP17_07477;product=Hypothetical protein;protein_id=EIE30039.1;transl_table=11 AIHX01000050.1 Genbank gene 6648 7976 . + . ID=gene-HP17_07482;Name=HP17_07482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07482 AIHX01000050.1 Genbank CDS 6648 7976 . + 0 ID=cds-EIE30040.1;Parent=gene-HP17_07482;Dbxref=NCBI_GP:EIE30040.1;Name=EIE30040.1;Note=COG0733 Na+-dependent transporters of the SNF family;gbkey=CDS;locus_tag=HP17_07482;product=sodium- and chloride-dependent transporter;protein_id=EIE30040.1;transl_table=11 AIHX01000050.1 Genbank pseudogene 7987 9316 . + . ID=gene-HP17_07487;Name=HP17_07487;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_07487;pseudo=true AIHX01000050.1 Genbank sequence_feature 7987 9316 . + . ID=id-HP17_07487;Note=potential frameshift: common BLAST hit: gi|254779480|ref|YP_003057585.1| sodium-and chloride-dependent transporter%3B membrane protein;gbkey=misc_feature;locus_tag=HP17_07487;pseudo=true AIHX01000050.1 Genbank gene 9331 10398 . + . ID=gene-HP17_07497;Name=HP17_07497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07497 AIHX01000050.1 Genbank CDS 9331 10398 . + 0 ID=cds-EIE30041.1;Parent=gene-HP17_07497;Dbxref=NCBI_GP:EIE30041.1;Name=EIE30041.1;Note=COG2829 Outer membrane phospholipase A;gbkey=CDS;locus_tag=HP17_07497;product=phospholipase A1;protein_id=EIE30041.1;transl_table=11 AIHX01000050.1 Genbank gene 10455 11579 . + . ID=gene-HP17_07502;Name=HP17_07502;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07502 AIHX01000050.1 Genbank CDS 10455 11579 . + 0 ID=cds-EIE30042.1;Parent=gene-HP17_07502;Dbxref=NCBI_GP:EIE30042.1;Name=EIE30042.1;Note=COG0592 DNA polymerase sliding clamp subunit (PCNA homolog);gbkey=CDS;locus_tag=HP17_07502;product=DNA polymerase III subunit beta;protein_id=EIE30042.1;transl_table=11 AIHX01000050.1 Genbank gene 11592 13913 . + . ID=gene-HP17_07507;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HP17_07507 AIHX01000050.1 Genbank CDS 11592 13913 . + 0 ID=cds-EIE30043.1;Parent=gene-HP17_07507;Dbxref=NCBI_GP:EIE30043.1;Name=EIE30043.1;Note=COG0187 Type IIA topoisomerase (DNA gyrase/topo II%2C topoisomerase IV)%2C B subunit;gbkey=CDS;gene=gyrB;locus_tag=HP17_07507;product=DNA gyrase subunit B;protein_id=EIE30043.1;transl_table=11 AIHX01000050.1 Genbank gene 13959 14174 . + . ID=gene-HP17_07512;Name=HP17_07512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07512 AIHX01000050.1 Genbank CDS 13959 14174 . + 0 ID=cds-EIE30044.1;Parent=gene-HP17_07512;Dbxref=NCBI_GP:EIE30044.1;Name=EIE30044.1;Note=not present in P79;gbkey=CDS;locus_tag=HP17_07512;product=Hypothetical protein;protein_id=EIE30044.1;transl_table=11 AIHX01000050.1 Genbank gene 14397 15218 . + . ID=gene-HP17_07517;Name=HP17_07517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07517 AIHX01000050.1 Genbank CDS 14397 15218 . + 0 ID=cds-EIE30045.1;Parent=gene-HP17_07517;Dbxref=NCBI_GP:EIE30045.1;Name=EIE30045.1;gbkey=CDS;locus_tag=HP17_07517;product=Hypothetical protein;protein_id=EIE30045.1;transl_table=11 AIHX01000050.1 Genbank gene 16159 17379 . + . ID=gene-HP17_07532;Name=HP17_07532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07532 AIHX01000050.1 Genbank CDS 16159 17379 . + 0 ID=cds-EIE30046.1;Parent=gene-HP17_07532;Dbxref=NCBI_GP:EIE30046.1;Name=EIE30046.1;Note=COG0739 Membrane proteins related to metalloendopeptidases;gbkey=CDS;locus_tag=HP17_07532;product=Hypothetical protein;protein_id=EIE30046.1;transl_table=11 AIHX01000050.1 Genbank gene 17379 18017 . + . ID=gene-HP17_07537;Name=HP17_07537;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07537 AIHX01000050.1 Genbank CDS 17379 18017 . + 0 ID=cds-EIE30047.1;Parent=gene-HP17_07537;Dbxref=NCBI_GP:EIE30047.1;Name=EIE30047.1;Note=COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes;gbkey=CDS;locus_tag=HP17_07537;product=UDP-sugar diphosphatase;protein_id=EIE30047.1;transl_table=11 AIHX01000050.1 Genbank gene 18028 19377 . + . ID=gene-HP17_07542;Name=HP17_07542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07542 AIHX01000050.1 Genbank CDS 18028 19377 . + 0 ID=cds-EIE30048.1;Parent=gene-HP17_07542;Dbxref=NCBI_GP:EIE30048.1;Name=EIE30048.1;gbkey=CDS;locus_tag=HP17_07542;product=plasminogen binding protein;protein_id=EIE30048.1;transl_table=11 AIHX01000050.1 Genbank gene 19382 19566 . + . ID=gene-HP17_07547;Name=HP17_07547;end_range=19566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07547;partial=true AIHX01000050.1 Genbank CDS 19382 19566 . + 0 ID=cds-EIE30049.1;Parent=gene-HP17_07547;Dbxref=NCBI_GP:EIE30049.1;Name=EIE30049.1;Note=COG0277 FAD/FMN-containing dehydrogenases;end_range=19566,.;gbkey=CDS;locus_tag=HP17_07547;partial=true;product=putative glycolate oxidase;protein_id=EIE30049.1;transl_table=11 ##sequence-region AIHX01000051.1 1 5089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000051.1 Genbank region 1 5089 . + . ID=AIHX01000051.1:1..5089;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000051.1 Genbank gene 1 1097 . + . ID=gene-HP17_07552;Name=HP17_07552;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07552;partial=true;start_range=.,1 AIHX01000051.1 Genbank CDS 1 1097 . + 2 ID=cds-EIE30023.1;Parent=gene-HP17_07552;Dbxref=NCBI_GP:EIE30023.1;Name=EIE30023.1;Note=COG0277 FAD/FMN-containing dehydrogenases;gbkey=CDS;locus_tag=HP17_07552;partial=true;product=glycolate oxidase subunit (glcD);protein_id=EIE30023.1;start_range=.,1;transl_table=11 AIHX01000051.1 Genbank gene 1119 1883 . + . ID=gene-HP17_07557;Name=HP17_07557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07557 AIHX01000051.1 Genbank CDS 1119 1883 . + 0 ID=cds-EIE30024.1;Parent=gene-HP17_07557;Dbxref=NCBI_GP:EIE30024.1;Name=EIE30024.1;Note=COG0289 Dihydrodipicolinate reductase;gbkey=CDS;locus_tag=HP17_07557;product=dihydrodipicolinate reductase;protein_id=EIE30024.1;transl_table=11 AIHX01000051.1 Genbank gene 2106 2333 . + . ID=gene-HP17_07562;Name=HP17_07562;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07562 AIHX01000051.1 Genbank CDS 2106 2333 . + 0 ID=cds-EIE30025.1;Parent=gene-HP17_07562;Dbxref=NCBI_GP:EIE30025.1;Name=EIE30025.1;gbkey=CDS;locus_tag=HP17_07562;product=urease-enhancing factor;protein_id=EIE30025.1;transl_table=11 AIHX01000051.1 Genbank gene 2426 2560 . + . ID=gene-HP17_07567;Name=HP17_07567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07567 AIHX01000051.1 Genbank CDS 2426 2560 . + 0 ID=cds-EIE30026.1;Parent=gene-HP17_07567;Dbxref=NCBI_GP:EIE30026.1;Name=EIE30026.1;gbkey=CDS;locus_tag=HP17_07567;product=Hypothetical protein;protein_id=EIE30026.1;transl_table=11 AIHX01000051.1 Genbank gene 2623 4068 . - . ID=gene-HP17_07572;Name=HP17_07572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07572 AIHX01000051.1 Genbank CDS 2623 4068 . - 0 ID=cds-EIE30027.1;Parent=gene-HP17_07572;Dbxref=NCBI_GP:EIE30027.1;Name=EIE30027.1;Note=COG0174 Glutamine synthetase;gbkey=CDS;locus_tag=HP17_07572;product=glutamine synthetase;protein_id=EIE30027.1;transl_table=11 AIHX01000051.1 Genbank gene 4206 5089 . + . ID=gene-HP17_07577;Name=HP17_07577;end_range=5089,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07577;partial=true AIHX01000051.1 Genbank CDS 4206 5089 . + 0 ID=cds-EIE30028.1;Parent=gene-HP17_07577;Dbxref=NCBI_GP:EIE30028.1;Name=EIE30028.1;Note=COG1479 Uncharacterized conserved protein;end_range=5089,.;gbkey=CDS;locus_tag=HP17_07577;partial=true;product=Hypothetical protein;protein_id=EIE30028.1;transl_table=11 ##sequence-region AIHX01000052.1 1 15527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000052.1 Genbank region 1 15527 . + . ID=AIHX01000052.1:1..15527;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000052.1 Genbank gene 1 1187 . + . ID=gene-HP17_07582;Name=HP17_07582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07582;partial=true;start_range=.,1 AIHX01000052.1 Genbank CDS 1 1187 . + 2 ID=cds-EIE30006.1;Parent=gene-HP17_07582;Dbxref=NCBI_GP:EIE30006.1;Name=EIE30006.1;Note=COG1479 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_07582;partial=true;product=Hypothetical protein;protein_id=EIE30006.1;start_range=.,1;transl_table=11 AIHX01000052.1 Genbank gene 1250 1699 . + . ID=gene-HP17_07587;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=HP17_07587 AIHX01000052.1 Genbank CDS 1250 1699 . + 0 ID=cds-EIE30007.1;Parent=gene-HP17_07587;Dbxref=NCBI_GP:EIE30007.1;Name=EIE30007.1;Note=COG0359 Ribosomal protein L9;gbkey=CDS;gene=rplI;locus_tag=HP17_07587;product=50S ribosomal protein L9;protein_id=EIE30007.1;transl_table=11 AIHX01000052.1 Genbank gene 1703 2245 . + . ID=gene-HP17_07592;Name=HP17_07592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07592 AIHX01000052.1 Genbank CDS 1703 2245 . + 0 ID=cds-EIE30008.1;Parent=gene-HP17_07592;Dbxref=NCBI_GP:EIE30008.1;Name=EIE30008.1;Note=COG5405 ATP-dependent protease HslVU (ClpYQ)%2C peptidase subunit;gbkey=CDS;locus_tag=HP17_07592;product=ATP-dependent protease subunit HslV;protein_id=EIE30008.1;transl_table=11 AIHX01000052.1 Genbank gene 2254 3576 . + . ID=gene-HP17_07597;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=HP17_07597 AIHX01000052.1 Genbank CDS 2254 3576 . + 0 ID=cds-EIE30009.1;Parent=gene-HP17_07597;Dbxref=NCBI_GP:EIE30009.1;Name=EIE30009.1;Note=COG1220 ATP-dependent protease HslVU (ClpYQ)%2C ATPase subunit;gbkey=CDS;gene=hslU;locus_tag=HP17_07597;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=EIE30009.1;transl_table=11 AIHX01000052.1 Genbank gene 3576 4481 . + . ID=gene-HP17_07602;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=HP17_07602 AIHX01000052.1 Genbank CDS 3576 4481 . + 0 ID=cds-EIE30010.1;Parent=gene-HP17_07602;Dbxref=NCBI_GP:EIE30010.1;Name=EIE30010.1;Note=COG1159 GTPase;gbkey=CDS;gene=era;locus_tag=HP17_07602;product=GTPase Era;protein_id=EIE30010.1;transl_table=11 AIHX01000052.1 Genbank gene 4478 5470 . + . ID=gene-HP17_07607;Name=HP17_07607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07607 AIHX01000052.1 Genbank CDS 4478 5470 . + 0 ID=cds-EIE30011.1;Parent=gene-HP17_07607;Dbxref=NCBI_GP:EIE30011.1;Name=EIE30011.1;Note=COG3034 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_07607;product=Hypothetical protein;protein_id=EIE30011.1;transl_table=11 AIHX01000052.1 Genbank gene 5557 6411 . - . ID=gene-HP17_07612;Name=HP17_07612;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07612 AIHX01000052.1 Genbank CDS 5557 6411 . - 0 ID=cds-EIE30012.1;Parent=gene-HP17_07612;Dbxref=NCBI_GP:EIE30012.1;Name=EIE30012.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_07612;product=Hypothetical protein;protein_id=EIE30012.1;transl_table=11 AIHX01000052.1 Genbank gene 6585 6932 . + . ID=gene-HP17_07617;Name=HP17_07617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07617 AIHX01000052.1 Genbank CDS 6585 6932 . + 0 ID=cds-EIE30013.1;Parent=gene-HP17_07617;Dbxref=NCBI_GP:EIE30013.1;Name=EIE30013.1;gbkey=CDS;locus_tag=HP17_07617;product=cag pathogenicity island protein (cag1);protein_id=EIE30013.1;transl_table=11 AIHX01000052.1 Genbank gene 7040 7390 . + . ID=gene-HP17_07622;Name=HP17_07622;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07622 AIHX01000052.1 Genbank CDS 7040 7390 . + 0 ID=cds-EIE30014.1;Parent=gene-HP17_07622;Dbxref=NCBI_GP:EIE30014.1;Name=EIE30014.1;Note=COG0551 Zn-finger domain associated with topoisomerase type I;gbkey=CDS;locus_tag=HP17_07622;product=cag pathogenicity island protein Epsilon;protein_id=EIE30014.1;transl_table=11 AIHX01000052.1 Genbank gene 7390 8835 . + . ID=gene-HP17_07627;Name=HP17_07627;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07627 AIHX01000052.1 Genbank CDS 7390 8835 . + 0 ID=cds-EIE30015.1;Parent=gene-HP17_07627;Dbxref=NCBI_GP:EIE30015.1;Name=EIE30015.1;gbkey=CDS;locus_tag=HP17_07627;product=cag pathogenicity island protein (cag3);protein_id=EIE30015.1;transl_table=11 AIHX01000052.1 Genbank gene 8840 9349 . + . ID=gene-HP17_07632;Name=HP17_07632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07632 AIHX01000052.1 Genbank CDS 8840 9349 . + 0 ID=cds-EIE30016.1;Parent=gene-HP17_07632;Dbxref=NCBI_GP:EIE30016.1;Name=EIE30016.1;gbkey=CDS;locus_tag=HP17_07632;product=cag pathogenicity island protein gamma;protein_id=EIE30016.1;transl_table=11 AIHX01000052.1 Genbank gene 9468 11714 . - . ID=gene-HP17_07637;Name=HP17_07637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07637 AIHX01000052.1 Genbank CDS 9468 11714 . - 0 ID=cds-EIE30017.1;Parent=gene-HP17_07637;Dbxref=NCBI_GP:EIE30017.1;Name=EIE30017.1;Note=COG3505 Type IV secretory pathway%2C VirD4 components;gbkey=CDS;locus_tag=HP17_07637;product=CAG pathogenicity island protein 5;protein_id=EIE30017.1;transl_table=11 AIHX01000052.1 Genbank gene 11723 12715 . - . ID=gene-HP17_07642;Name=HP17_07642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07642 AIHX01000052.1 Genbank CDS 11723 12715 . - 0 ID=cds-EIE30018.1;Parent=gene-HP17_07642;Dbxref=NCBI_GP:EIE30018.1;Name=EIE30018.1;Note=COG0630 Type IV secretory pathway%2C VirB11 components%2C and related ATPases involved in archaeal flagella biosynthesis;gbkey=CDS;locus_tag=HP17_07642;product=cag pathogenicity island protein alpha;protein_id=EIE30018.1;transl_table=11 AIHX01000052.1 Genbank gene 12720 13319 . - . ID=gene-HP17_07647;Name=HP17_07647;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07647 AIHX01000052.1 Genbank CDS 12720 13319 . - 0 ID=cds-EIE30019.1;Parent=gene-HP17_07647;Dbxref=NCBI_GP:EIE30019.1;Name=EIE30019.1;gbkey=CDS;locus_tag=HP17_07647;product=cag pathogenicity island protein (cag6);protein_id=EIE30019.1;transl_table=11 AIHX01000052.1 Genbank gene 13300 13467 . - . ID=gene-HP17_07652;Name=HP17_07652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07652 AIHX01000052.1 Genbank CDS 13300 13467 . - 0 ID=cds-EIE30020.1;Parent=gene-HP17_07652;Dbxref=NCBI_GP:EIE30020.1;Name=EIE30020.1;gbkey=CDS;locus_tag=HP17_07652;product=Hypothetical protein;protein_id=EIE30020.1;transl_table=11 AIHX01000052.1 Genbank gene 13457 15527 . - . ID=gene-HP17_07657;Name=HP17_07657;end_range=15527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07657;partial=true AIHX01000052.1 Genbank CDS 13457 15527 . - 1 ID=cds-EIE30021.1;Parent=gene-HP17_07657;Dbxref=NCBI_GP:EIE30021.1;Name=EIE30021.1;Note=COG2948 Type IV secretory pathway%2C VirB10 components;end_range=15527,.;gbkey=CDS;locus_tag=HP17_07657;partial=true;product=cag pathogenicity island protein Y VirB10-like protein;protein_id=EIE30021.1;transl_table=11 ##sequence-region AIHX01000053.1 1 29395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000053.1 Genbank region 1 29395 . + . ID=AIHX01000053.1:1..29395;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000053.1 Genbank gene 173 301 . + . ID=gene-HP17_07662;Name=HP17_07662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07662 AIHX01000053.1 Genbank CDS 173 301 . + 0 ID=cds-EIE29953.1;Parent=gene-HP17_07662;Dbxref=NCBI_GP:EIE29953.1;Name=EIE29953.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_07662;product=Hypothetical protein;protein_id=EIE29953.1;transl_table=11 AIHX01000053.1 Genbank gene 298 639 . + . ID=gene-HP17_07667;Name=HP17_07667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07667 AIHX01000053.1 Genbank CDS 298 639 . + 0 ID=cds-EIE29954.1;Parent=gene-HP17_07667;Dbxref=NCBI_GP:EIE29954.1;Name=EIE29954.1;gbkey=CDS;locus_tag=HP17_07667;product=Hypothetical protein;protein_id=EIE29954.1;transl_table=11 AIHX01000053.1 Genbank gene 1205 1672 . - . ID=gene-HP17_07672;Name=HP17_07672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07672 AIHX01000053.1 Genbank CDS 1205 1672 . - 0 ID=cds-EIE29955.1;Parent=gene-HP17_07672;Dbxref=NCBI_GP:EIE29955.1;Name=EIE29955.1;gbkey=CDS;locus_tag=HP17_07672;product=Hypothetical protein;protein_id=EIE29955.1;transl_table=11 AIHX01000053.1 Genbank gene 1766 2161 . - . ID=gene-HP17_07677;Name=HP17_07677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07677 AIHX01000053.1 Genbank CDS 1766 2161 . - 0 ID=cds-EIE29956.1;Parent=gene-HP17_07677;Dbxref=NCBI_GP:EIE29956.1;Name=EIE29956.1;gbkey=CDS;locus_tag=HP17_07677;product=lipoprotein;protein_id=EIE29956.1;transl_table=11 AIHX01000053.1 Genbank gene 2170 2847 . - . ID=gene-HP17_07682;Name=HP17_07682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07682 AIHX01000053.1 Genbank CDS 2170 2847 . - 0 ID=cds-EIE29957.1;Parent=gene-HP17_07682;Dbxref=NCBI_GP:EIE29957.1;Name=EIE29957.1;gbkey=CDS;locus_tag=HP17_07682;product=Hypothetical protein;protein_id=EIE29957.1;transl_table=11 AIHX01000053.1 Genbank gene 2982 3104 . - . ID=gene-HP17_07687;Name=HP17_07687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07687 AIHX01000053.1 Genbank CDS 2982 3104 . - 0 ID=cds-EIE29958.1;Parent=gene-HP17_07687;Dbxref=NCBI_GP:EIE29958.1;Name=EIE29958.1;gbkey=CDS;locus_tag=HP17_07687;product=Hypothetical protein;protein_id=EIE29958.1;transl_table=11 AIHX01000053.1 Genbank gene 3086 3331 . - . ID=gene-HP17_07692;Name=HP17_07692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07692 AIHX01000053.1 Genbank CDS 3086 3331 . - 0 ID=cds-EIE29959.1;Parent=gene-HP17_07692;Dbxref=NCBI_GP:EIE29959.1;Name=EIE29959.1;gbkey=CDS;locus_tag=HP17_07692;product=Hypothetical protein;protein_id=EIE29959.1;transl_table=11 AIHX01000053.1 Genbank gene 3402 4280 . + . ID=gene-HP17_07697;Name=HP17_07697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07697 AIHX01000053.1 Genbank CDS 3402 4280 . + 0 ID=cds-EIE29960.1;Parent=gene-HP17_07697;Dbxref=NCBI_GP:EIE29960.1;Name=EIE29960.1;Note=COG0616 Periplasmic serine proteases (ClpP class);gbkey=CDS;locus_tag=HP17_07697;product=Signal peptide protease IV;protein_id=EIE29960.1;transl_table=11 AIHX01000053.1 Genbank gene 4283 5164 . + . ID=gene-HP17_07702;Name=HP17_07702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07702 AIHX01000053.1 Genbank CDS 4283 5164 . + 0 ID=cds-EIE29961.1;Parent=gene-HP17_07702;Dbxref=NCBI_GP:EIE29961.1;Name=EIE29961.1;Note=COG0788 Formyltetrahydrofolate hydrolase;gbkey=CDS;locus_tag=HP17_07702;product=formyltetrahydrofolate deformylase;protein_id=EIE29961.1;transl_table=11 AIHX01000053.1 Genbank gene 5165 7612 . + . ID=gene-HP17_07707;Name=HP17_07707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07707 AIHX01000053.1 Genbank CDS 5165 7612 . + 0 ID=cds-EIE29962.1;Parent=gene-HP17_07707;Dbxref=NCBI_GP:EIE29962.1;Name=EIE29962.1;gbkey=CDS;locus_tag=HP17_07707;product=Hypothetical protein;protein_id=EIE29962.1;transl_table=11 AIHX01000053.1 Genbank gene 7825 7917 . - . ID=gene-HP17_07712;Name=HP17_07712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07712 AIHX01000053.1 Genbank CDS 7825 7917 . - 0 ID=cds-EIE29963.1;Parent=gene-HP17_07712;Dbxref=NCBI_GP:EIE29963.1;Name=EIE29963.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_07712;product=Hypothetical protein;protein_id=EIE29963.1;transl_table=11 AIHX01000053.1 Genbank gene 8191 8463 . - . ID=gene-HP17_07717;Name=HP17_07717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07717 AIHX01000053.1 Genbank CDS 8191 8463 . - 0 ID=cds-EIE29964.1;Parent=gene-HP17_07717;Dbxref=NCBI_GP:EIE29964.1;Name=EIE29964.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_07717;product=Hypothetical protein;protein_id=EIE29964.1;transl_table=11 AIHX01000053.1 Genbank gene 8728 9543 . + . ID=gene-HP17_07722;Name=ksgA;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=HP17_07722 AIHX01000053.1 Genbank CDS 8728 9543 . + 0 ID=cds-EIE29965.1;Parent=gene-HP17_07722;Dbxref=NCBI_GP:EIE29965.1;Name=EIE29965.1;Note=COG0030 Dimethyladenosine transferase (rRNA methylation);gbkey=CDS;gene=ksgA;locus_tag=HP17_07722;product=16S ribosomal RNA methyltransferase KsgA/Dim1 family protein;protein_id=EIE29965.1;transl_table=11 AIHX01000053.1 Genbank gene 9594 11672 . + . ID=gene-HP17_07727;Name=HP17_07727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07727 AIHX01000053.1 Genbank CDS 9594 11672 . + 0 ID=cds-EIE29966.1;Parent=gene-HP17_07727;Dbxref=NCBI_GP:EIE29966.1;Name=EIE29966.1;Note=COG1782 Predicted metal-dependent RNase%2C consists of a metallo-beta-lactamase domain and an RNA-binding KH domain;gbkey=CDS;locus_tag=HP17_07727;product=ribonuclease J;protein_id=EIE29966.1;transl_table=11 AIHX01000053.1 Genbank gene 11656 12645 . + . ID=gene-HP17_07732;Name=HP17_07732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07732 AIHX01000053.1 Genbank CDS 11656 12645 . + 0 ID=cds-EIE29967.1;Parent=gene-HP17_07732;Dbxref=NCBI_GP:EIE29967.1;Name=EIE29967.1;Note=COG0794 Predicted sugar phosphate isomerase involved in capsule formation;gbkey=CDS;locus_tag=HP17_07732;product=polysialic acid capsule expression protein;protein_id=EIE29967.1;transl_table=11 AIHX01000053.1 Genbank gene 12642 13715 . + . ID=gene-HP17_07737;Name=HP17_07737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07737 AIHX01000053.1 Genbank CDS 12642 13715 . + 0 ID=cds-EIE29968.1;Parent=gene-HP17_07737;Dbxref=NCBI_GP:EIE29968.1;Name=EIE29968.1;Note=COG0820 Predicted Fe-S-cluster redox enzyme;gbkey=CDS;locus_tag=HP17_07737;product=ribosomal RNA large subunit methyltransferase N;protein_id=EIE29968.1;transl_table=11 AIHX01000053.1 Genbank gene 13923 14144 . + . ID=gene-HP17_07742;Name=HP17_07742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07742 AIHX01000053.1 Genbank CDS 13923 14144 . + 0 ID=cds-EIE29969.1;Parent=gene-HP17_07742;Dbxref=NCBI_GP:EIE29969.1;Name=EIE29969.1;Note=not present in 26695;gbkey=CDS;locus_tag=HP17_07742;product=Hypothetical protein;protein_id=EIE29969.1;transl_table=11 AIHX01000053.1 Genbank gene 14193 14819 . - . ID=gene-HP17_07747;Name=HP17_07747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07747 AIHX01000053.1 Genbank CDS 14193 14819 . - 0 ID=cds-EIE29970.1;Parent=gene-HP17_07747;Dbxref=NCBI_GP:EIE29970.1;Name=EIE29970.1;gbkey=CDS;locus_tag=HP17_07747;product=Hypothetical protein;protein_id=EIE29970.1;transl_table=11 AIHX01000053.1 Genbank gene 14921 15175 . + . ID=gene-HP17_07752;Name=HP17_07752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07752 AIHX01000053.1 Genbank CDS 14921 15175 . + 0 ID=cds-EIE29971.1;Parent=gene-HP17_07752;Dbxref=NCBI_GP:EIE29971.1;Name=EIE29971.1;Note=COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog);gbkey=CDS;locus_tag=HP17_07752;product=RNA binding protein;protein_id=EIE29971.1;transl_table=11 AIHX01000053.1 Genbank gene 15200 17962 . + . ID=gene-HP17_07757;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=HP17_07757 AIHX01000053.1 Genbank CDS 15200 17962 . + 0 ID=cds-EIE29972.1;Parent=gene-HP17_07757;Dbxref=NCBI_GP:EIE29972.1;Name=EIE29972.1;Note=COG0060 Isoleucyl-tRNA synthetase;gbkey=CDS;gene=ileS;locus_tag=HP17_07757;product=isoleucyl-tRNA synthetase;protein_id=EIE29972.1;transl_table=11 AIHX01000053.1 Genbank gene 17979 18893 . + . ID=gene-HP17_07762;Name=HP17_07762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07762 AIHX01000053.1 Genbank CDS 17979 18893 . + 0 ID=cds-EIE29973.1;Parent=gene-HP17_07762;Dbxref=NCBI_GP:EIE29973.1;Name=EIE29973.1;Note=COG0630 Type IV secretory pathway%2C VirB11 components%2C and related ATPases involved in archaeal flagella biosynthesis;gbkey=CDS;locus_tag=HP17_07762;product=type IV secretion system ATPase;protein_id=EIE29973.1;transl_table=11 AIHX01000053.1 Genbank gene 18894 20198 . + . ID=gene-HP17_07767;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=HP17_07767 AIHX01000053.1 Genbank CDS 18894 20198 . + 0 ID=cds-EIE29974.1;Parent=gene-HP17_07767;Dbxref=NCBI_GP:EIE29974.1;Name=EIE29974.1;Note=COG1157 Flagellar biosynthesis/type III secretory pathway ATPase;gbkey=CDS;gene=fliI;locus_tag=HP17_07767;product=flagellum-specific ATP synthase;protein_id=EIE29974.1;transl_table=11 AIHX01000053.1 Genbank gene 20224 20475 . + . ID=gene-HP17_07772;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=HP17_07772 AIHX01000053.1 Genbank CDS 20224 20475 . + 0 ID=cds-EIE29975.1;Parent=gene-HP17_07772;Dbxref=NCBI_GP:EIE29975.1;Name=EIE29975.1;Note=COG1987 Flagellar biosynthesis pathway%2C component FliQ;gbkey=CDS;gene=fliQ;locus_tag=HP17_07772;product=flagellar biosynthesis protein FliQ;protein_id=EIE29975.1;transl_table=11 AIHX01000053.1 Genbank gene 20479 21258 . + . ID=gene-HP17_07777;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=HP17_07777 AIHX01000053.1 Genbank CDS 20479 21258 . + 0 ID=cds-EIE29976.1;Parent=gene-HP17_07777;Dbxref=NCBI_GP:EIE29976.1;Name=EIE29976.1;Note=COG0812 UDP-N-acetylmuramate dehydrogenase;gbkey=CDS;gene=murB;locus_tag=HP17_07777;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=EIE29976.1;transl_table=11 AIHX01000053.1 Genbank gene 23004 24107 . - . ID=gene-HP17_07792;Name=HP17_07792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07792 AIHX01000053.1 Genbank CDS 23004 24107 . - 0 ID=cds-EIE29977.1;Parent=gene-HP17_07792;Dbxref=NCBI_GP:EIE29977.1;Name=EIE29977.1;Note=COG1442 Lipopolysaccharide biosynthesis proteins%2C LPS:glycosyltransferases;gbkey=CDS;locus_tag=HP17_07792;product=lipopolysaccharide biosynthesis protein;protein_id=EIE29977.1;transl_table=11 AIHX01000053.1 Genbank gene 24112 24942 . - . ID=gene-HP17_07797;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=HP17_07797 AIHX01000053.1 Genbank CDS 24112 24942 . - 0 ID=cds-EIE29978.1;Parent=gene-HP17_07797;Dbxref=NCBI_GP:EIE29978.1;Name=EIE29978.1;Note=COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase;gbkey=CDS;gene=miaA;locus_tag=HP17_07797;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=EIE29978.1;transl_table=11 AIHX01000053.1 Genbank gene 25013 25354 . - . ID=gene-HP17_07802;Name=HP17_07802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07802 AIHX01000053.1 Genbank CDS 25013 25354 . - 0 ID=cds-EIE29979.1;Parent=gene-HP17_07802;Dbxref=NCBI_GP:EIE29979.1;Name=EIE29979.1;Note=COG0799 Uncharacterized homolog of plant Iojap protein;gbkey=CDS;locus_tag=HP17_07802;product=Hypothetical protein;protein_id=EIE29979.1;transl_table=11 AIHX01000053.1 Genbank gene 25414 25860 . + . ID=gene-HP17_07807;Name=HP17_07807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07807 AIHX01000053.1 Genbank CDS 25414 25860 . + 0 ID=cds-EIE29980.1;Parent=gene-HP17_07807;Dbxref=NCBI_GP:EIE29980.1;Name=EIE29980.1;Note=COG0780 Enzyme related to GTP cyclohydrolase I;gbkey=CDS;locus_tag=HP17_07807;product=7-cyano-7-deazaguanine reductase;protein_id=EIE29980.1;transl_table=11 AIHX01000053.1 Genbank gene 25971 26891 . - . ID=gene-HP17_07812;Name=HP17_07812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07812 AIHX01000053.1 Genbank CDS 25971 26891 . - 0 ID=cds-EIE29981.1;Parent=gene-HP17_07812;Dbxref=NCBI_GP:EIE29981.1;Name=EIE29981.1;gbkey=CDS;locus_tag=HP17_07812;product=Hypothetical protein;protein_id=EIE29981.1;transl_table=11 AIHX01000053.1 Genbank gene 27035 28867 . - . ID=gene-HP17_07817;Name=HP17_07817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07817 AIHX01000053.1 Genbank CDS 27035 28867 . - 0 ID=cds-EIE29982.1;Parent=gene-HP17_07817;Dbxref=NCBI_GP:EIE29982.1;Name=EIE29982.1;Note=COG1479 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_07817;product=Hypothetical protein;protein_id=EIE29982.1;transl_table=11 AIHX01000053.1 Genbank gene 28910 29350 . - . ID=gene-HP17_07822;Name=HP17_07822;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07822 AIHX01000053.1 Genbank CDS 28910 29350 . - 0 ID=cds-EIE29983.1;Parent=gene-HP17_07822;Dbxref=NCBI_GP:EIE29983.1;Name=EIE29983.1;gbkey=CDS;locus_tag=HP17_07822;product=Hypothetical protein;protein_id=EIE29983.1;transl_table=11 ##sequence-region AIHX01000054.1 1 33989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000054.1 Genbank region 1 33989 . + . ID=AIHX01000054.1:1..33989;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000054.1 Genbank gene 11 808 . - . ID=gene-HP17_07827;Name=HP17_07827;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07827 AIHX01000054.1 Genbank CDS 11 808 . - 0 ID=cds-EIE29888.1;Parent=gene-HP17_07827;Dbxref=NCBI_GP:EIE29888.1;Name=EIE29888.1;Note=COG0218 Predicted GTPase;gbkey=CDS;locus_tag=HP17_07827;product=labile enterotoxin outputA;protein_id=EIE29888.1;transl_table=11 AIHX01000054.1 Genbank gene 805 1461 . - . ID=gene-HP17_07832;Name=HP17_07832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07832 AIHX01000054.1 Genbank CDS 805 1461 . - 0 ID=cds-EIE29889.1;Parent=gene-HP17_07832;Dbxref=NCBI_GP:EIE29889.1;Name=EIE29889.1;gbkey=CDS;locus_tag=HP17_07832;product=Hypothetical protein;protein_id=EIE29889.1;transl_table=11 AIHX01000054.1 Genbank gene 1681 2727 . - . ID=gene-HP17_07837;Name=HP17_07837;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07837 AIHX01000054.1 Genbank CDS 1681 2727 . - 0 ID=cds-EIE29890.1;Parent=gene-HP17_07837;Dbxref=NCBI_GP:EIE29890.1;Name=EIE29890.1;Note=COG1132 ABC-type multidrug transport system%2C ATPase and permease components;gbkey=CDS;locus_tag=HP17_07837;product=Hypothetical protein;protein_id=EIE29890.1;transl_table=11 AIHX01000054.1 Genbank gene 2762 4081 . - . ID=gene-HP17_07842;Name=HP17_07842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07842 AIHX01000054.1 Genbank CDS 2762 4081 . - 0 ID=cds-EIE29891.1;Parent=gene-HP17_07842;Dbxref=NCBI_GP:EIE29891.1;Name=EIE29891.1;Note=COG0621 2-methylthioadenine synthetase;gbkey=CDS;locus_tag=HP17_07842;product=Hypothetical protein;protein_id=EIE29891.1;transl_table=11 AIHX01000054.1 Genbank gene 4083 4544 . - . ID=gene-HP17_07847;Name=HP17_07847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07847 AIHX01000054.1 Genbank CDS 4083 4544 . - 0 ID=cds-EIE29892.1;Parent=gene-HP17_07847;Dbxref=NCBI_GP:EIE29892.1;Name=EIE29892.1;Note=COG2236 Predicted phosphoribosyltransferases;gbkey=CDS;locus_tag=HP17_07847;product=putative nucleotide phosphoribosyltransferase;protein_id=EIE29892.1;transl_table=11 AIHX01000054.1 Genbank gene 4553 5662 . - . ID=gene-HP17_07852;Name=HP17_07852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07852 AIHX01000054.1 Genbank CDS 4553 5662 . - 0 ID=cds-EIE29893.1;Parent=gene-HP17_07852;Dbxref=NCBI_GP:EIE29893.1;Name=EIE29893.1;Note=COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase;gbkey=CDS;locus_tag=HP17_07852;product=putative aminotransferase;protein_id=EIE29893.1;transl_table=11 AIHX01000054.1 Genbank gene 5811 6287 . + . ID=gene-HP17_07857;Name=HP17_07857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07857 AIHX01000054.1 Genbank CDS 5811 6287 . + 0 ID=cds-EIE29894.1;Parent=gene-HP17_07857;Dbxref=NCBI_GP:EIE29894.1;Name=EIE29894.1;Note=COG1267 Phosphatidylglycerophosphatase A and related proteins;gbkey=CDS;locus_tag=HP17_07857;product=phosphatidyl glycerophosphatase A;protein_id=EIE29894.1;transl_table=11 AIHX01000054.1 Genbank gene 6365 7408 . + . ID=gene-HP17_07862;Name=ddl;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=HP17_07862 AIHX01000054.1 Genbank CDS 6365 7408 . + 0 ID=cds-EIE29895.1;Parent=gene-HP17_07862;Dbxref=NCBI_GP:EIE29895.1;Name=EIE29895.1;Note=COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes;gbkey=CDS;gene=ddl;locus_tag=HP17_07862;product=D-alanyl-alanine synthetase A;protein_id=EIE29895.1;transl_table=11 AIHX01000054.1 Genbank gene 7408 8133 . + . ID=gene-HP17_07867;Name=HP17_07867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07867 AIHX01000054.1 Genbank CDS 7408 8133 . + 0 ID=cds-EIE29896.1;Parent=gene-HP17_07867;Dbxref=NCBI_GP:EIE29896.1;Name=EIE29896.1;Note=COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily);gbkey=CDS;locus_tag=HP17_07867;product=2-hydroxy-6-oxohepta-2%2C4-dienoate hydrolase;protein_id=EIE29896.1;transl_table=11 AIHX01000054.1 Genbank gene 8120 9601 . + . ID=gene-HP17_07872;Name=HP17_07872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07872 AIHX01000054.1 Genbank CDS 8120 9601 . + 0 ID=cds-EIE29897.1;Parent=gene-HP17_07872;Dbxref=NCBI_GP:EIE29897.1;Name=EIE29897.1;Note=COG0770 UDP-N-acetylmuramyl pentapeptide synthase;gbkey=CDS;locus_tag=HP17_07872;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase;protein_id=EIE29897.1;transl_table=11 AIHX01000054.1 Genbank gene 9611 10096 . + . ID=gene-HP17_07877;Name=HP17_07877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07877 AIHX01000054.1 Genbank CDS 9611 10096 . + 0 ID=cds-EIE29898.1;Parent=gene-HP17_07877;Dbxref=NCBI_GP:EIE29898.1;Name=EIE29898.1;Note=COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases;gbkey=CDS;locus_tag=HP17_07877;product=Hypothetical protein;protein_id=EIE29898.1;transl_table=11 AIHX01000054.1 Genbank gene 10188 11117 . + . ID=gene-HP17_07882;Name=HP17_07882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07882 AIHX01000054.1 Genbank CDS 10188 11117 . + 0 ID=cds-EIE29899.1;Parent=gene-HP17_07882;Dbxref=NCBI_GP:EIE29899.1;Name=EIE29899.1;Note=COG0462 Phosphoribosylpyrophosphate synthetase;gbkey=CDS;locus_tag=HP17_07882;product=ribose-phosphate pyrophosphokinase;protein_id=EIE29899.1;transl_table=11 AIHX01000054.1 Genbank gene 11178 12323 . - . ID=gene-HP17_07887;Name=HP17_07887;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07887 AIHX01000054.1 Genbank CDS 11178 12323 . - 0 ID=cds-EIE29900.1;Parent=gene-HP17_07887;Dbxref=NCBI_GP:EIE29900.1;Name=EIE29900.1;Note=COG0772 Bacterial cell division membrane protein;gbkey=CDS;locus_tag=HP17_07887;product=Rod shape-determining protein RodA;protein_id=EIE29900.1;transl_table=11 AIHX01000054.1 Genbank gene 13692 14675 . + . ID=gene-HP17_07902;Name=HP17_07902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07902 AIHX01000054.1 Genbank CDS 13692 14675 . + 0 ID=cds-EIE29901.1;Parent=gene-HP17_07902;Dbxref=NCBI_GP:EIE29901.1;Name=EIE29901.1;Note=COG0564 Pseudouridylate synthases%2C 23S RNA-specific;gbkey=CDS;locus_tag=HP17_07902;product=Hypothetical protein;protein_id=EIE29901.1;transl_table=11 AIHX01000054.1 Genbank gene 14626 15891 . + . ID=gene-HP17_07907;Name=HP17_07907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07907 AIHX01000054.1 Genbank CDS 14626 15891 . + 0 ID=cds-EIE29902.1;Parent=gene-HP17_07907;Dbxref=NCBI_GP:EIE29902.1;Name=EIE29902.1;Note=COG3401 Fibronectin type 3 domain-containing protein;gbkey=CDS;locus_tag=HP17_07907;product=Hypothetical protein;protein_id=EIE29902.1;transl_table=11 AIHX01000054.1 Genbank gene 15902 17083 . + . ID=gene-HP17_07912;Name=HP17_07912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07912 AIHX01000054.1 Genbank CDS 15902 17083 . + 0 ID=cds-EIE29903.1;Parent=gene-HP17_07912;Dbxref=NCBI_GP:EIE29903.1;Name=EIE29903.1;Note=COG0220 Predicted S-adenosylmethionine-dependent methyltransferase;gbkey=CDS;locus_tag=HP17_07912;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=EIE29903.1;transl_table=11 AIHX01000054.1 Genbank gene 17080 17751 . + . ID=gene-HP17_07917;Name=HP17_07917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07917 AIHX01000054.1 Genbank CDS 17080 17751 . + 0 ID=cds-EIE29904.1;Parent=gene-HP17_07917;Dbxref=NCBI_GP:EIE29904.1;Name=EIE29904.1;Note=COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_07917;product=cell division protein;protein_id=EIE29904.1;transl_table=11 AIHX01000054.1 Genbank gene 17738 18544 . + . ID=gene-HP17_07922;Name=HP17_07922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07922 AIHX01000054.1 Genbank CDS 17738 18544 . + 0 ID=cds-EIE29905.1;Parent=gene-HP17_07922;Dbxref=NCBI_GP:EIE29905.1;Name=EIE29905.1;Note=COG2177 Cell division protein;gbkey=CDS;locus_tag=HP17_07922;product=cell division protein FtsX;protein_id=EIE29905.1;transl_table=11 AIHX01000054.1 Genbank gene 18537 19739 . + . ID=gene-HP17_07927;Name=HP17_07927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07927 AIHX01000054.1 Genbank CDS 18537 19739 . + 0 ID=cds-EIE29906.1;Parent=gene-HP17_07927;Dbxref=NCBI_GP:EIE29906.1;Name=EIE29906.1;Note=COG0739 Membrane proteins related to metalloendopeptidases;gbkey=CDS;locus_tag=HP17_07927;product=Hypothetical protein;protein_id=EIE29906.1;transl_table=11 AIHX01000054.1 Genbank gene 19832 20191 . + . ID=gene-HP17_07932;Name=HP17_07932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07932 AIHX01000054.1 Genbank CDS 19832 20191 . + 0 ID=cds-EIE29907.1;Parent=gene-HP17_07932;Dbxref=NCBI_GP:EIE29907.1;Name=EIE29907.1;Note=COG1334 Uncharacterized flagellar protein FlaG;gbkey=CDS;locus_tag=HP17_07932;product=flagellar protein FlaG;protein_id=EIE29907.1;transl_table=11 AIHX01000054.1 Genbank gene 20208 22265 . + . ID=gene-HP17_07937;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=HP17_07937 AIHX01000054.1 Genbank CDS 20208 22265 . + 0 ID=cds-EIE29908.1;Parent=gene-HP17_07937;Dbxref=NCBI_GP:EIE29908.1;Name=EIE29908.1;Note=COG1345 Flagellar capping protein;gbkey=CDS;gene=fliD;locus_tag=HP17_07937;product=flagellar capping protein;protein_id=EIE29908.1;transl_table=11 AIHX01000054.1 Genbank gene 22307 22687 . + . ID=gene-HP17_07942;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=HP17_07942 AIHX01000054.1 Genbank CDS 22307 22687 . + 0 ID=cds-EIE29909.1;Parent=gene-HP17_07942;Dbxref=NCBI_GP:EIE29909.1;Name=EIE29909.1;Note=COG1516 Flagellin-specific chaperone FliS;gbkey=CDS;gene=fliS;locus_tag=HP17_07942;product=flagellar protein FliS;protein_id=EIE29909.1;transl_table=11 AIHX01000054.1 Genbank gene 22674 22913 . + . ID=gene-HP17_07947;Name=HP17_07947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07947 AIHX01000054.1 Genbank CDS 22674 22913 . + 0 ID=cds-EIE29910.1;Parent=gene-HP17_07947;Dbxref=NCBI_GP:EIE29910.1;Name=EIE29910.1;gbkey=CDS;locus_tag=HP17_07947;product=Hypothetical protein;protein_id=EIE29910.1;transl_table=11 AIHX01000054.1 Genbank gene 23005 23640 . + . ID=gene-HP17_07952;Name=HP17_07952;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07952 AIHX01000054.1 Genbank CDS 23005 23640 . + 0 ID=cds-EIE29911.1;Parent=gene-HP17_07952;Dbxref=NCBI_GP:EIE29911.1;Name=EIE29911.1;Note=COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1;gbkey=CDS;locus_tag=HP17_07952;product=molybdopterin biosynthesis protein;protein_id=EIE29911.1;transl_table=11 AIHX01000054.1 Genbank gene 23642 23788 . + . ID=gene-HP17_07957;Name=HP17_07957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07957 AIHX01000054.1 Genbank CDS 23642 23788 . + 0 ID=cds-EIE29912.1;Parent=gene-HP17_07957;Dbxref=NCBI_GP:EIE29912.1;Name=EIE29912.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_07957;product=Hypothetical protein;protein_id=EIE29912.1;transl_table=11 AIHX01000054.1 Genbank gene 23792 24670 . + . ID=gene-HP17_07962;Name=HP17_07962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07962 AIHX01000054.1 Genbank CDS 23792 24670 . + 0 ID=cds-EIE29913.1;Parent=gene-HP17_07962;Dbxref=NCBI_GP:EIE29913.1;Name=EIE29913.1;Note=COG0388 Predicted amidohydrolase;gbkey=CDS;locus_tag=HP17_07962;product=carbon-nitrogen hydrolase;protein_id=EIE29913.1;transl_table=11 AIHX01000054.1 Genbank gene 24797 26110 . + . ID=gene-HP17_07967;Name=HP17_07967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07967 AIHX01000054.1 Genbank CDS 24797 26110 . + 0 ID=cds-EIE29914.1;Parent=gene-HP17_07967;Dbxref=NCBI_GP:EIE29914.1;Name=EIE29914.1;Note=COG2056 Predicted permease;gbkey=CDS;locus_tag=HP17_07967;product=Hypothetical protein;protein_id=EIE29914.1;transl_table=11 AIHX01000054.1 Genbank gene 26173 27426 . + . ID=gene-HP17_07972;Name=HP17_07972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07972 AIHX01000054.1 Genbank CDS 26173 27426 . + 0 ID=cds-EIE29915.1;Parent=gene-HP17_07972;Dbxref=NCBI_GP:EIE29915.1;Name=EIE29915.1;Note=COG0534 Na+-driven multidrug efflux pump;gbkey=CDS;locus_tag=HP17_07972;product=Hypothetical protein;protein_id=EIE29915.1;transl_table=11 AIHX01000054.1 Genbank gene 27427 29016 . - . ID=gene-HP17_07977;Name=HP17_07977;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07977 AIHX01000054.1 Genbank CDS 27427 29016 . - 0 ID=cds-EIE29916.1;Parent=gene-HP17_07977;Dbxref=NCBI_GP:EIE29916.1;Name=EIE29916.1;Note=COG1418 Predicted HD superfamily hydrolase;gbkey=CDS;locus_tag=HP17_07977;product=phosphodiesterase;protein_id=EIE29916.1;transl_table=11 AIHX01000054.1 Genbank gene 28916 29563 . - . ID=gene-HP17_07982;Name=HP17_07982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07982 AIHX01000054.1 Genbank CDS 28916 29563 . - 0 ID=cds-EIE29917.1;Parent=gene-HP17_07982;Dbxref=NCBI_GP:EIE29917.1;Name=EIE29917.1;Note=COG0212 5-formyltetrahydrofolate cyclo-ligase;gbkey=CDS;locus_tag=HP17_07982;product=Hypothetical protein;protein_id=EIE29917.1;transl_table=11 AIHX01000054.1 Genbank gene 29688 30245 . + . ID=gene-HP17_07987;Name=HP17_07987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07987 AIHX01000054.1 Genbank CDS 29688 30245 . + 0 ID=cds-EIE29918.1;Parent=gene-HP17_07987;Dbxref=NCBI_GP:EIE29918.1;Name=EIE29918.1;gbkey=CDS;locus_tag=HP17_07987;product=Hypothetical protein;protein_id=EIE29918.1;transl_table=11 AIHX01000054.1 Genbank gene 30252 31133 . + . ID=gene-HP17_07992;Name=HP17_07992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07992 AIHX01000054.1 Genbank CDS 30252 31133 . + 0 ID=cds-EIE29919.1;Parent=gene-HP17_07992;Dbxref=NCBI_GP:EIE29919.1;Name=EIE29919.1;Note=COG0552 Signal recognition particle GTPase;gbkey=CDS;locus_tag=HP17_07992;product=signal recognition particle-docking protein FtsY;protein_id=EIE29919.1;transl_table=11 AIHX01000054.1 Genbank gene 31142 31462 . - . ID=gene-HP17_07997;Name=HP17_07997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_07997 AIHX01000054.1 Genbank CDS 31142 31462 . - 0 ID=cds-EIE29920.1;Parent=gene-HP17_07997;Dbxref=NCBI_GP:EIE29920.1;Name=EIE29920.1;Note=COG0727 Predicted Fe-S-cluster oxidoreductase;gbkey=CDS;locus_tag=HP17_07997;product=Hypothetical protein;protein_id=EIE29920.1;transl_table=11 AIHX01000054.1 Genbank gene 31527 32468 . - . ID=gene-HP17_08002;Name=HP17_08002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08002 AIHX01000054.1 Genbank CDS 31527 32468 . - 0 ID=cds-EIE29921.1;Parent=gene-HP17_08002;Dbxref=NCBI_GP:EIE29921.1;Name=EIE29921.1;gbkey=CDS;locus_tag=HP17_08002;product=Hypothetical protein;protein_id=EIE29921.1;transl_table=11 AIHX01000054.1 Genbank gene 33896 33989 . - . ID=gene-HP17_08017;Name=HP17_08017;end_range=33989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08017;partial=true AIHX01000054.1 Genbank CDS 33896 33989 . - 1 ID=cds-EIE29922.1;Parent=gene-HP17_08017;Dbxref=NCBI_GP:EIE29922.1;Name=EIE29922.1;end_range=33989,.;gbkey=CDS;locus_tag=HP17_08017;partial=true;product=Hypothetical protein;protein_id=EIE29922.1;transl_table=11 ##sequence-region AIHX01000055.1 1 21528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000055.1 Genbank region 1 21528 . + . ID=AIHX01000055.1:1..21528;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000055.1 Genbank gene 1 845 . - . ID=gene-HP17_00716;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=HP17_00716;partial=true;start_range=.,1 AIHX01000055.1 Genbank CDS 1 845 . - 0 ID=cds-EIE29849.1;Parent=gene-HP17_00716;Dbxref=NCBI_GP:EIE29849.1;Name=EIE29849.1;Note=COG0804 Urea amidohydrolase (urease) alpha subunit;gbkey=CDS;gene=ureB;locus_tag=HP17_00716;partial=true;product=urease subunit beta;protein_id=EIE29849.1;start_range=.,1;transl_table=11 AIHX01000055.1 Genbank gene 849 1565 . - . ID=gene-HP17_00721;Name=HP17_00721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00721 AIHX01000055.1 Genbank CDS 849 1565 . - 0 ID=cds-EIE29850.1;Parent=gene-HP17_00721;Dbxref=NCBI_GP:EIE29850.1;Name=EIE29850.1;Note=COG0831 Urea amidohydrolase (urease) gamma subunit;gbkey=CDS;locus_tag=HP17_00721;product=urease subunit alpha;protein_id=EIE29850.1;transl_table=11 AIHX01000055.1 Genbank gene 1815 1890 . - . ID=gene-HP17_t00823;Name=HP17_t00823;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t00823 AIHX01000055.1 Genbank tRNA 1815 1890 . - . ID=rna-HP17_t00823;Parent=gene-HP17_t00823;gbkey=tRNA;locus_tag=HP17_t00823;product=tRNA-Val AIHX01000055.1 Genbank exon 1815 1890 . - . ID=exon-HP17_t00823-1;Parent=rna-HP17_t00823;gbkey=tRNA;locus_tag=HP17_t00823;product=tRNA-Val AIHX01000055.1 Genbank gene 1909 2382 . - . ID=gene-HP17_00726;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=HP17_00726 AIHX01000055.1 Genbank CDS 1909 2382 . - 0 ID=cds-EIE29851.1;Parent=gene-HP17_00726;Dbxref=NCBI_GP:EIE29851.1;Name=EIE29851.1;Note=COG0597 Lipoprotein signal peptidase;gbkey=CDS;gene=lspA;locus_tag=HP17_00726;product=lipoprotein signal peptidase;protein_id=EIE29851.1;transl_table=11 AIHX01000055.1 Genbank gene 2376 3713 . - . ID=gene-HP17_00731;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HP17_00731 AIHX01000055.1 Genbank CDS 2376 3713 . - 0 ID=cds-EIE29852.1;Parent=gene-HP17_00731;Dbxref=NCBI_GP:EIE29852.1;Name=EIE29852.1;Note=COG1109 Phosphomannomutase;gbkey=CDS;gene=glmM;locus_tag=HP17_00731;product=phosphoglucosamine mutase;protein_id=EIE29852.1;transl_table=11 AIHX01000055.1 Genbank gene 3803 4072 . + . ID=gene-HP17_00736;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=HP17_00736 AIHX01000055.1 Genbank CDS 3803 4072 . + 0 ID=cds-EIE29853.1;Parent=gene-HP17_00736;Dbxref=NCBI_GP:EIE29853.1;Name=EIE29853.1;Note=COG0268 Ribosomal protein S20;gbkey=CDS;gene=rpsT;locus_tag=HP17_00736;product=30S ribosomal protein S20;protein_id=EIE29853.1;transl_table=11 AIHX01000055.1 Genbank gene 4196 5254 . + . ID=gene-HP17_00741;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HP17_00741 AIHX01000055.1 Genbank CDS 4196 5254 . + 0 ID=cds-EIE29854.1;Parent=gene-HP17_00741;Dbxref=NCBI_GP:EIE29854.1;Name=EIE29854.1;Note=COG0216 Protein chain release factor A;gbkey=CDS;gene=prfA;locus_tag=HP17_00741;product=peptide chain release factor 1;protein_id=EIE29854.1;transl_table=11 AIHX01000055.1 Genbank gene 5637 6404 . + . ID=gene-HP17_00746;Name=HP17_00746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00746 AIHX01000055.1 Genbank CDS 5637 6404 . + 0 ID=cds-EIE29855.1;Parent=gene-HP17_00746;Dbxref=NCBI_GP:EIE29855.1;Name=EIE29855.1;gbkey=CDS;locus_tag=HP17_00746;product=outer membrane protein;protein_id=EIE29855.1;transl_table=11 AIHX01000055.1 Genbank gene 6652 8379 . + . ID=gene-HP17_00751;Name=HP17_00751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00751 AIHX01000055.1 Genbank CDS 6652 8379 . + 0 ID=cds-EIE29856.1;Parent=gene-HP17_00751;Dbxref=NCBI_GP:EIE29856.1;Name=EIE29856.1;gbkey=CDS;locus_tag=HP17_00751;product=Hypothetical protein;protein_id=EIE29856.1;transl_table=11 AIHX01000055.1 Genbank gene 8639 10660 . - . ID=gene-HP17_00756;Name=HP17_00756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00756 AIHX01000055.1 Genbank CDS 8639 10660 . - 0 ID=cds-EIE29857.1;Parent=gene-HP17_00756;Dbxref=NCBI_GP:EIE29857.1;Name=EIE29857.1;Note=COG0840 Methyl-accepting chemotaxis protein;gbkey=CDS;locus_tag=HP17_00756;product=methyl-accepting chemotaxis protein;protein_id=EIE29857.1;transl_table=11 AIHX01000055.1 Genbank gene 10801 11190 . - . ID=gene-HP17_00761;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=HP17_00761 AIHX01000055.1 Genbank CDS 10801 11190 . - 0 ID=cds-EIE29858.1;Parent=gene-HP17_00761;Dbxref=NCBI_GP:EIE29858.1;Name=EIE29858.1;Note=COG0103 Ribosomal protein S9;gbkey=CDS;gene=rpsI;locus_tag=HP17_00761;product=30S ribosomal protein S9;protein_id=EIE29858.1;transl_table=11 AIHX01000055.1 Genbank gene 11187 11612 . - . ID=gene-HP17_00766;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=HP17_00766 AIHX01000055.1 Genbank CDS 11187 11612 . - 0 ID=cds-EIE29859.1;Parent=gene-HP17_00766;Dbxref=NCBI_GP:EIE29859.1;Name=EIE29859.1;Note=COG0102 Ribosomal protein L13;gbkey=CDS;gene=rplM;locus_tag=HP17_00766;product=50S ribosomal protein L13;protein_id=EIE29859.1;transl_table=11 AIHX01000055.1 Genbank gene 11920 12108 . - . ID=gene-HP17_00771;Name=HP17_00771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00771 AIHX01000055.1 Genbank CDS 11920 12108 . - 0 ID=cds-EIE29860.1;Parent=gene-HP17_00771;Dbxref=NCBI_GP:EIE29860.1;Name=EIE29860.1;gbkey=CDS;locus_tag=HP17_00771;product=Hypothetical protein;protein_id=EIE29860.1;transl_table=11 AIHX01000055.1 Genbank gene 12115 13467 . - . ID=gene-HP17_00776;Name=HP17_00776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00776 AIHX01000055.1 Genbank CDS 12115 13467 . - 0 ID=cds-EIE29861.1;Parent=gene-HP17_00776;Dbxref=NCBI_GP:EIE29861.1;Name=EIE29861.1;Note=COG0579 Predicted dehydrogenase;gbkey=CDS;locus_tag=HP17_00776;product=Hypothetical protein;protein_id=EIE29861.1;transl_table=11 AIHX01000055.1 Genbank gene 13521 14894 . - . ID=gene-HP17_00781;Name=HP17_00781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00781 AIHX01000055.1 Genbank CDS 13521 14894 . - 0 ID=cds-EIE29862.1;Parent=gene-HP17_00781;Dbxref=NCBI_GP:EIE29862.1;Name=EIE29862.1;Note=COG0791 Cell wall-associated hydrolases (invasion-associated proteins);gbkey=CDS;locus_tag=HP17_00781;product=Hypothetical protein;protein_id=EIE29862.1;transl_table=11 AIHX01000055.1 Genbank gene 14914 16944 . - . ID=gene-HP17_00786;Name=HP17_00786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00786 AIHX01000055.1 Genbank CDS 14914 16944 . - 0 ID=cds-EIE29863.1;Parent=gene-HP17_00786;Dbxref=NCBI_GP:EIE29863.1;Name=EIE29863.1;Note=COG0568 DNA-directed RNA polymerase%2C sigma subunit (sigma70/sigma32);gbkey=CDS;locus_tag=HP17_00786;product=RNA polymerase sigma factor RpoD;protein_id=EIE29863.1;transl_table=11 AIHX01000055.1 Genbank gene 17139 17834 . - . ID=gene-HP17_00791;Name=HP17_00791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00791 AIHX01000055.1 Genbank CDS 17139 17834 . - 0 ID=cds-EIE29864.1;Parent=gene-HP17_00791;Dbxref=NCBI_GP:EIE29864.1;Name=EIE29864.1;Note=COG0775 Nucleoside phosphorylase;gbkey=CDS;locus_tag=HP17_00791;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=EIE29864.1;transl_table=11 AIHX01000055.1 Genbank gene 17845 18774 . - . ID=gene-HP17_00796;Name=HP17_00796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00796 AIHX01000055.1 Genbank CDS 17845 18774 . - 0 ID=cds-EIE29865.1;Parent=gene-HP17_00796;Dbxref=NCBI_GP:EIE29865.1;Name=EIE29865.1;Note=COG0331 (acyl-carrier-protein) S-malonyltransferase;gbkey=CDS;locus_tag=HP17_00796;product=malonyl CoA-acyl carrier protein transacylase;protein_id=EIE29865.1;transl_table=11 AIHX01000055.1 Genbank sequence_feature 18884 19165 . - . ID=id-AIHX01000055.1:18884..19165;Note=potential protein location (Hypothetical protein HP17_00801 [Helicobacter pylori 17874]) that overlaps RNA (tRNA-S);gbkey=misc_feature AIHX01000055.1 Genbank gene 18904 18995 . + . ID=gene-HP17_t00825;Name=HP17_t00825;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t00825 AIHX01000055.1 Genbank tRNA 18904 18995 . + . ID=rna-HP17_t00825;Parent=gene-HP17_t00825;gbkey=tRNA;locus_tag=HP17_t00825;product=tRNA-Ser AIHX01000055.1 Genbank exon 18904 18995 . + . ID=exon-HP17_t00825-1;Parent=rna-HP17_t00825;gbkey=tRNA;locus_tag=HP17_t00825;product=tRNA-Ser AIHX01000055.1 Genbank gene 19211 20203 . + . ID=gene-HP17_00806;Name=HP17_00806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00806 AIHX01000055.1 Genbank CDS 19211 20203 . + 0 ID=cds-EIE29866.1;Parent=gene-HP17_00806;Dbxref=NCBI_GP:EIE29866.1;Name=EIE29866.1;Note=COG2958 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_00806;product=HrgA protein;protein_id=EIE29866.1;transl_table=11 AIHX01000055.1 Genbank gene 20207 21028 . + . ID=gene-HP17_00811;Name=HP17_00811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00811 AIHX01000055.1 Genbank CDS 20207 21028 . + 0 ID=cds-EIE29867.1;Parent=gene-HP17_00811;Dbxref=NCBI_GP:EIE29867.1;Name=EIE29867.1;Note=COG0863 DNA modification methylase;gbkey=CDS;locus_tag=HP17_00811;product=type II adenine methyltransferase;protein_id=EIE29867.1;transl_table=11 AIHX01000055.1 Genbank gene 21052 21528 . - . ID=gene-HP17_00816;Name=HP17_00816;end_range=21528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00816;partial=true AIHX01000055.1 Genbank CDS 21052 21528 . - 0 ID=cds-EIE29868.1;Parent=gene-HP17_00816;Dbxref=NCBI_GP:EIE29868.1;Name=EIE29868.1;end_range=21528,.;gbkey=CDS;locus_tag=HP17_00816;partial=true;product=Alpha-1%2C2-fucosyltransferase;protein_id=EIE29868.1;transl_table=11 ##sequence-region AIHX01000056.1 1 7492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000056.1 Genbank region 1 7492 . + . ID=AIHX01000056.1:1..7492;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000056.1 Genbank gene 151 1116 . - . ID=gene-HP17_08024;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=HP17_08024 AIHX01000056.1 Genbank CDS 151 1116 . - 0 ID=cds-EIE29828.1;Parent=gene-HP17_08024;Dbxref=NCBI_GP:EIE29828.1;Name=EIE29828.1;Note=COG2896 Molybdenum cofactor biosynthesis enzyme;gbkey=CDS;gene=moaA;locus_tag=HP17_08024;product=molybdenum cofactor biosynthesis protein A;protein_id=EIE29828.1;transl_table=11 AIHX01000056.1 Genbank gene 1204 1809 . + . ID=gene-HP17_08029;Name=HP17_08029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08029 AIHX01000056.1 Genbank CDS 1204 1809 . + 0 ID=cds-EIE29829.1;Parent=gene-HP17_08029;Dbxref=NCBI_GP:EIE29829.1;Name=EIE29829.1;Note=COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A;gbkey=CDS;locus_tag=HP17_08029;product=molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=EIE29829.1;transl_table=11 AIHX01000056.1 Genbank gene 1802 2878 . + . ID=gene-HP17_08034;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=HP17_08034 AIHX01000056.1 Genbank CDS 1802 2878 . + 0 ID=cds-EIE29830.1;Parent=gene-HP17_08034;Dbxref=NCBI_GP:EIE29830.1;Name=EIE29830.1;Note=COG1377 Flagellar biosynthesis pathway%2C component FlhB;gbkey=CDS;gene=flhB;locus_tag=HP17_08034;product=flagellar biosynthesis protein FlhB;protein_id=EIE29830.1;transl_table=11 AIHX01000056.1 Genbank gene 2962 3699 . - . ID=gene-HP17_08039;Name=HP17_08039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08039 AIHX01000056.1 Genbank CDS 2962 3699 . - 0 ID=cds-EIE29831.1;Parent=gene-HP17_08039;Dbxref=NCBI_GP:EIE29831.1;Name=EIE29831.1;gbkey=CDS;locus_tag=HP17_08039;product=Hypothetical protein;protein_id=EIE29831.1;transl_table=11 AIHX01000056.1 Genbank gene 3718 5016 . - . ID=gene-HP17_08044;Name=HP17_08044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08044 AIHX01000056.1 Genbank CDS 3718 5016 . - 0 ID=cds-EIE29832.1;Parent=gene-HP17_08044;Dbxref=NCBI_GP:EIE29832.1;Name=EIE29832.1;Note=COG0860 N-acetylmuramoyl-L-alanine amidase;gbkey=CDS;locus_tag=HP17_08044;product=N-acetylmuramoyl-L-alanine amidase;protein_id=EIE29832.1;transl_table=11 AIHX01000056.1 Genbank gene 5023 6114 . - . ID=gene-HP17_08049;Name=HP17_08049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08049 AIHX01000056.1 Genbank CDS 5023 6114 . - 0 ID=cds-EIE29833.1;Parent=gene-HP17_08049;Dbxref=NCBI_GP:EIE29833.1;Name=EIE29833.1;Note=COG2070 Dioxygenases related to 2-nitropropane dioxygenase;gbkey=CDS;locus_tag=HP17_08049;product=2-nitropropane dioxygenase;protein_id=EIE29833.1;transl_table=11 AIHX01000056.1 Genbank gene 6131 7339 . - . ID=gene-HP17_08054;Name=HP17_08054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08054 AIHX01000056.1 Genbank CDS 6131 7339 . - 0 ID=cds-EIE29834.1;Parent=gene-HP17_08054;Dbxref=NCBI_GP:EIE29834.1;Name=EIE29834.1;Note=COG0162 Tyrosyl-tRNA synthetase;gbkey=CDS;locus_tag=HP17_08054;product=tyrosyl-tRNA synthetase;protein_id=EIE29834.1;transl_table=11 ##sequence-region AIHX01000057.1 1 5556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000057.1 Genbank region 1 5556 . + . ID=AIHX01000057.1:1..5556;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000057.1 Genbank gene 1 2167 . - . ID=gene-HP17_08059;Name=HP17_08059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08059;partial=true;start_range=.,1 AIHX01000057.1 Genbank CDS 1 2167 . - 0 ID=cds-EIE29817.1;Parent=gene-HP17_08059;Dbxref=NCBI_GP:EIE29817.1;Name=EIE29817.1;Note=COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases;gbkey=CDS;locus_tag=HP17_08059;partial=true;product=Guanosine-3'%2C 5'-bis(diphosphate)3'-pyrophosphohydrolase;protein_id=EIE29817.1;start_range=.,1;transl_table=11 AIHX01000057.1 Genbank gene 2154 2378 . - . ID=gene-HP17_08064;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=HP17_08064 AIHX01000057.1 Genbank CDS 2154 2378 . - 0 ID=cds-EIE29818.1;Parent=gene-HP17_08064;Dbxref=NCBI_GP:EIE29818.1;Name=EIE29818.1;Note=COG1758 DNA-directed RNA polymerase%2C subunit K/omega;gbkey=CDS;gene=rpoZ;locus_tag=HP17_08064;product=DNA-directed RNA polymerase subunit omega;protein_id=EIE29818.1;transl_table=11 AIHX01000057.1 Genbank gene 2420 3142 . - . ID=gene-HP17_08069;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=HP17_08069 AIHX01000057.1 Genbank CDS 2420 3142 . - 0 ID=cds-EIE29819.1;Parent=gene-HP17_08069;Dbxref=NCBI_GP:EIE29819.1;Name=EIE29819.1;Note=COG0528 Uridylate kinase;gbkey=CDS;gene=pyrH;locus_tag=HP17_08069;product=uridylate kinase;protein_id=EIE29819.1;transl_table=11 AIHX01000057.1 Genbank gene 3251 3934 . - . ID=gene-HP17_08074;Name=HP17_08074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08074 AIHX01000057.1 Genbank CDS 3251 3934 . - 0 ID=cds-EIE29820.1;Parent=gene-HP17_08074;Dbxref=NCBI_GP:EIE29820.1;Name=EIE29820.1;Note=COG1427 Predicted periplasmic solute-binding protein;gbkey=CDS;locus_tag=HP17_08074;product=Hypothetical protein;protein_id=EIE29820.1;transl_table=11 AIHX01000057.1 Genbank gene 4065 5556 . + . ID=gene-HP17_08079;Name=HP17_08079;end_range=5556,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08079;partial=true AIHX01000057.1 Genbank CDS 4065 5556 . + 0 ID=cds-EIE29821.1;Parent=gene-HP17_08079;Dbxref=NCBI_GP:EIE29821.1;Name=EIE29821.1;Note=COG1049 Aconitase B;end_range=5556,.;gbkey=CDS;locus_tag=HP17_08079;partial=true;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=EIE29821.1;transl_table=11 ##sequence-region AIHX01000058.1 1 11206 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000058.1 Genbank region 1 11206 . + . ID=AIHX01000058.1:1..11206;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000058.1 Genbank gene 1 1033 . + . ID=gene-HP17_08084;Name=HP17_08084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08084;partial=true;start_range=.,1 AIHX01000058.1 Genbank CDS 1 1033 . + 1 ID=cds-EIE29808.1;Parent=gene-HP17_08084;Dbxref=NCBI_GP:EIE29808.1;Name=EIE29808.1;Note=COG1049 Aconitase B;gbkey=CDS;locus_tag=HP17_08084;partial=true;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=EIE29808.1;start_range=.,1;transl_table=11 AIHX01000058.1 Genbank gene 1115 1381 . + . ID=gene-HP17_08089;Name=HP17_08089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08089 AIHX01000058.1 Genbank CDS 1115 1381 . + 0 ID=cds-EIE29809.1;Parent=gene-HP17_08089;Dbxref=NCBI_GP:EIE29809.1;Name=EIE29809.1;gbkey=CDS;locus_tag=HP17_08089;product=Hypothetical protein;protein_id=EIE29809.1;transl_table=11 AIHX01000058.1 Genbank gene 1643 2932 . + . ID=gene-HP17_08094;Name=HP17_08094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08094 AIHX01000058.1 Genbank CDS 1643 2932 . + 0 ID=cds-EIE29810.1;Parent=gene-HP17_08094;Dbxref=NCBI_GP:EIE29810.1;Name=EIE29810.1;gbkey=CDS;locus_tag=HP17_08094;product=Hypothetical protein;protein_id=EIE29810.1;transl_table=11 AIHX01000058.1 Genbank gene 3026 4393 . + . ID=gene-HP17_08099;Name=HP17_08099;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08099 AIHX01000058.1 Genbank CDS 3026 4393 . + 0 ID=cds-EIE29811.1;Parent=gene-HP17_08099;Dbxref=NCBI_GP:EIE29811.1;Name=EIE29811.1;gbkey=CDS;locus_tag=HP17_08099;product=Hypothetical protein;protein_id=EIE29811.1;transl_table=11 AIHX01000058.1 Genbank gene 4400 4927 . - . ID=gene-HP17_08104;Name=HP17_08104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08104 AIHX01000058.1 Genbank CDS 4400 4927 . - 0 ID=cds-EIE29812.1;Parent=gene-HP17_08104;Dbxref=NCBI_GP:EIE29812.1;Name=EIE29812.1;gbkey=CDS;locus_tag=HP17_08104;product=Hypothetical protein;protein_id=EIE29812.1;transl_table=11 AIHX01000058.1 Genbank gene 5410 5964 . - . ID=gene-HP17_08109;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=HP17_08109 AIHX01000058.1 Genbank CDS 5410 5964 . - 0 ID=cds-EIE29813.1;Parent=gene-HP17_08109;Dbxref=NCBI_GP:EIE29813.1;Name=EIE29813.1;Note=COG2834 Outer membrane lipoprotein-sorting protein;gbkey=CDS;gene=lolA;locus_tag=HP17_08109;product=lipoprotein chaperone;protein_id=EIE29813.1;transl_table=11 AIHX01000058.1 Genbank gene 6112 8709 . + . ID=gene-HP17_08114;Name=HP17_08114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08114 AIHX01000058.1 Genbank CDS 6112 8709 . + 0 ID=cds-EIE29814.1;Parent=gene-HP17_08114;Dbxref=NCBI_GP:EIE29814.1;Name=EIE29814.1;Note=COG0653 Preprotein translocase subunit SecA (ATPase%2C RNA helicase);gbkey=CDS;locus_tag=HP17_08114;product=preprotein translocase subunit SecA;protein_id=EIE29814.1;transl_table=11 AIHX01000058.1 Genbank gene 8699 9931 . + . ID=gene-HP17_08119;Name=HP17_08119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08119 AIHX01000058.1 Genbank CDS 8699 9931 . + 0 ID=cds-EIE29815.1;Parent=gene-HP17_08119;Dbxref=NCBI_GP:EIE29815.1;Name=EIE29815.1;Note=COG4591 ABC-type transport system%2C involved in lipoprotein release%2C permease component;gbkey=CDS;locus_tag=HP17_08119;product=Hypothetical protein;protein_id=EIE29815.1;transl_table=11 AIHX01000058.1 Genbank gene 10211 11206 . + . ID=gene-HP17_08124;Name=HP17_08124;end_range=11206,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08124;partial=true AIHX01000058.1 Genbank CDS 10211 11206 . + 0 ID=cds-EIE29816.1;Parent=gene-HP17_08124;Dbxref=NCBI_GP:EIE29816.1;Name=EIE29816.1;end_range=11206,.;gbkey=CDS;locus_tag=HP17_08124;partial=true;product=Hypothetical protein;protein_id=EIE29816.1;transl_table=11 ##sequence-region AIHX01000059.1 1 892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000059.1 Genbank region 1 892 . + . ID=AIHX01000059.1:1..892;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000059.1 Genbank gene 1 483 . + . ID=gene-HP17_08129;Name=HP17_08129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08129;partial=true;start_range=.,1 AIHX01000059.1 Genbank CDS 1 483 . + 0 ID=cds-EIE29792.1;Parent=gene-HP17_08129;Dbxref=NCBI_GP:EIE29792.1;Name=EIE29792.1;gbkey=CDS;locus_tag=HP17_08129;partial=true;product=outer membrane protein HofF;protein_id=EIE29792.1;start_range=.,1;transl_table=11 AIHX01000059.1 Genbank gene 507 629 . + . ID=gene-HP17_08134;Name=HP17_08134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08134 AIHX01000059.1 Genbank CDS 507 629 . + 0 ID=cds-EIE29793.1;Parent=gene-HP17_08134;Dbxref=NCBI_GP:EIE29793.1;Name=EIE29793.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_08134;product=Hypothetical protein;protein_id=EIE29793.1;transl_table=11 AIHX01000059.1 Genbank gene 647 799 . + . ID=gene-HP17_08139;Name=HP17_08139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08139 AIHX01000059.1 Genbank CDS 647 799 . + 0 ID=cds-EIE29794.1;Parent=gene-HP17_08139;Dbxref=NCBI_GP:EIE29794.1;Name=EIE29794.1;gbkey=CDS;locus_tag=HP17_08139;product=Hypothetical protein;protein_id=EIE29794.1;transl_table=11 ##sequence-region AIHX01000060.1 1 573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000060.1 Genbank region 1 573 . + . ID=AIHX01000060.1:1..573;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000060.1 Genbank gene 1 573 . + . ID=gene-HP17_08144;Name=HP17_08144;end_range=573,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08144;partial=true;start_range=.,1 AIHX01000060.1 Genbank CDS 1 573 . + 2 ID=cds-EIE29789.1;Parent=gene-HP17_08144;Dbxref=NCBI_GP:EIE29789.1;Name=EIE29789.1;Note=COG0732 Restriction endonuclease S subunits;end_range=573,.;gbkey=CDS;locus_tag=HP17_08144;partial=true;product=type I restriction enzyme subunit S;protein_id=EIE29789.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000061.1 1 1285 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000061.1 Genbank region 1 1285 . + . ID=AIHX01000061.1:1..1285;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000061.1 Genbank gene 1 1285 . + . ID=gene-HP17_08149;Name=HP17_08149;end_range=1285,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08149;partial=true;start_range=.,1 AIHX01000061.1 Genbank CDS 1 1285 . + 1 ID=cds-EIE29788.1;Parent=gene-HP17_08149;Dbxref=NCBI_GP:EIE29788.1;Name=EIE29788.1;end_range=1285,.;gbkey=CDS;locus_tag=HP17_08149;partial=true;product=outer membrane protein BabA;protein_id=EIE29788.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000062.1 1 566 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000062.1 Genbank region 1 566 . + . ID=AIHX01000062.1:1..566;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000062.1 Genbank gene 1 566 . - . ID=gene-HP17_08154;Name=HP17_08154;end_range=566,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08154;partial=true;start_range=.,1 AIHX01000062.1 Genbank CDS 1 566 . - 0 ID=cds-EIE29786.1;Parent=gene-HP17_08154;Dbxref=NCBI_GP:EIE29786.1;Name=EIE29786.1;end_range=566,.;gbkey=CDS;locus_tag=HP17_08154;partial=true;product=outer membrane protein BabA;protein_id=EIE29786.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000063.1 1 20087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000063.1 Genbank region 1 20087 . + . ID=AIHX01000063.1:1..20087;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000063.1 Genbank gene 576 1883 . + . ID=gene-HP17_08159;Name=HP17_08159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08159 AIHX01000063.1 Genbank CDS 576 1883 . + 0 ID=cds-EIE29751.1;Parent=gene-HP17_08159;Dbxref=NCBI_GP:EIE29751.1;Name=EIE29751.1;Note=COG2252 Permeases;gbkey=CDS;locus_tag=HP17_08159;product=Hypothetical protein;protein_id=EIE29751.1;transl_table=11 AIHX01000063.1 Genbank gene 2012 3235 . + . ID=gene-HP17_08164;Name=HP17_08164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08164 AIHX01000063.1 Genbank CDS 2012 3235 . + 0 ID=cds-EIE29752.1;Parent=gene-HP17_08164;Dbxref=NCBI_GP:EIE29752.1;Name=EIE29752.1;Note=COG0738 Fucose permease;gbkey=CDS;locus_tag=HP17_08164;product=glucose/galactose transporter;protein_id=EIE29752.1;transl_table=11 AIHX01000063.1 Genbank gene 3507 4058 . - . ID=gene-HP17_08169;Name=HP17_08169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08169 AIHX01000063.1 Genbank CDS 3507 4058 . - 0 ID=cds-EIE29753.1;Parent=gene-HP17_08169;Dbxref=NCBI_GP:EIE29753.1;Name=EIE29753.1;gbkey=CDS;locus_tag=HP17_08169;product=Hypothetical protein;protein_id=EIE29753.1;transl_table=11 AIHX01000063.1 Genbank gene 4178 5011 . - . ID=gene-HP17_08174;Name=HP17_08174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08174 AIHX01000063.1 Genbank CDS 4178 5011 . - 0 ID=cds-EIE29754.1;Parent=gene-HP17_08174;Dbxref=NCBI_GP:EIE29754.1;Name=EIE29754.1;Note=COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain;gbkey=CDS;locus_tag=HP17_08174;product=glutamine ABC transporter periplasmic glutamine-binding protein;protein_id=EIE29754.1;transl_table=11 AIHX01000063.1 Genbank gene 5061 5807 . - . ID=gene-HP17_08179;Name=HP17_08179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08179 AIHX01000063.1 Genbank CDS 5061 5807 . - 0 ID=cds-EIE29755.1;Parent=gene-HP17_08179;Dbxref=NCBI_GP:EIE29755.1;Name=EIE29755.1;Note=COG1126 ABC-type polar amino acid transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_08179;product=phosphate ABC transporter ATP-binding protein;protein_id=EIE29755.1;transl_table=11 AIHX01000063.1 Genbank gene 5809 6480 . - . ID=gene-HP17_08184;Name=HP17_08184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08184 AIHX01000063.1 Genbank CDS 5809 6480 . - 0 ID=cds-EIE29756.1;Parent=gene-HP17_08184;Dbxref=NCBI_GP:EIE29756.1;Name=EIE29756.1;Note=COG0765 ABC-type amino acid transport system%2C permease component;gbkey=CDS;locus_tag=HP17_08184;product=glutamine ABC transporter%2C permease protein;protein_id=EIE29756.1;transl_table=11 AIHX01000063.1 Genbank gene 6482 7018 . - . ID=gene-HP17_08189;Name=HP17_08189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08189 AIHX01000063.1 Genbank CDS 6482 7018 . - 0 ID=cds-EIE29757.1;Parent=gene-HP17_08189;Dbxref=NCBI_GP:EIE29757.1;Name=EIE29757.1;Note=COG0765 ABC-type amino acid transport system%2C permease component;gbkey=CDS;locus_tag=HP17_08189;product=glutamine ABC transporter permease;protein_id=EIE29757.1;transl_table=11 AIHX01000063.1 Genbank gene 7344 9407 . + . ID=gene-HP17_08194;Name=HP17_08194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08194 AIHX01000063.1 Genbank CDS 7344 9407 . + 0 ID=cds-EIE29758.1;Parent=gene-HP17_08194;Dbxref=NCBI_GP:EIE29758.1;Name=EIE29758.1;Note=COG1966 Carbon starvation protein%2C predicted membrane protein;gbkey=CDS;locus_tag=HP17_08194;product=carbon starvation protein;protein_id=EIE29758.1;transl_table=11 AIHX01000063.1 Genbank gene 9718 11133 . - . ID=gene-HP17_08199;Name=HP17_08199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08199 AIHX01000063.1 Genbank CDS 9718 11133 . - 0 ID=cds-EIE29759.1;Parent=gene-HP17_08199;Dbxref=NCBI_GP:EIE29759.1;Name=EIE29759.1;gbkey=CDS;locus_tag=HP17_08199;product=outer membrane protein HofH;protein_id=EIE29759.1;transl_table=11 AIHX01000063.1 Genbank gene 11440 13077 . - . ID=gene-HP17_08204;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=HP17_08204 AIHX01000063.1 Genbank CDS 11440 13077 . - 0 ID=cds-EIE29760.1;Parent=gene-HP17_08204;Dbxref=NCBI_GP:EIE29760.1;Name=EIE29760.1;Note=COG0166 Glucose-6-phosphate isomerase;gbkey=CDS;gene=pgi;locus_tag=HP17_08204;product=glucose-6-phosphate isomerase;protein_id=EIE29760.1;transl_table=11 AIHX01000063.1 Genbank pseudogene 13141 14302 . + . ID=gene-HP17_08209;Name=HP17_08209;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_08209;pseudo=true AIHX01000063.1 Genbank sequence_feature 13141 14302 . + . ID=id-HP17_08209;Note=potential frameshift: common BLAST hit: gi|208435059|ref|YP_002266725.1| tetracycline resistance proteintet A (P );gbkey=misc_feature;locus_tag=HP17_08209;pseudo=true AIHX01000063.1 Genbank gene 14309 15283 . - . ID=gene-HP17_08219;Name=HP17_08219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08219 AIHX01000063.1 Genbank CDS 14309 15283 . - 0 ID=cds-EIE29761.1;Parent=gene-HP17_08219;Dbxref=NCBI_GP:EIE29761.1;Name=EIE29761.1;Note=COG0492 Thioredoxin reductase;gbkey=CDS;locus_tag=HP17_08219;product=thioredoxin reductase;protein_id=EIE29761.1;transl_table=11 AIHX01000063.1 Genbank gene 15311 15502 . - . ID=gene-HP17_08224;Name=HP17_08224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08224 AIHX01000063.1 Genbank CDS 15311 15502 . - 0 ID=cds-EIE29762.1;Parent=gene-HP17_08224;Dbxref=NCBI_GP:EIE29762.1;Name=EIE29762.1;Note=COG3197 Uncharacterized protein%2C possibly involved in nitrogen fixation;gbkey=CDS;locus_tag=HP17_08224;product=cation transport subunit for cbb3-type oxidase;protein_id=EIE29762.1;transl_table=11 AIHX01000063.1 Genbank gene 15636 16217 . + . ID=gene-HP17_08229;Name=HP17_08229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08229 AIHX01000063.1 Genbank CDS 15636 16217 . + 0 ID=cds-EIE29763.1;Parent=gene-HP17_08229;Dbxref=NCBI_GP:EIE29763.1;Name=EIE29763.1;Note=COG0586 Uncharacterized membrane-associated protein;gbkey=CDS;locus_tag=HP17_08229;product=Hypothetical protein;protein_id=EIE29763.1;transl_table=11 AIHX01000063.1 Genbank gene 16307 16801 . + . ID=gene-HP17_08234;Name=HP17_08234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08234 AIHX01000063.1 Genbank CDS 16307 16801 . + 0 ID=cds-EIE29764.1;Parent=gene-HP17_08234;Dbxref=NCBI_GP:EIE29764.1;Name=EIE29764.1;Note=COG0716 Flavodoxins;gbkey=CDS;locus_tag=HP17_08234;product=flavodoxin FldA;protein_id=EIE29764.1;transl_table=11 AIHX01000063.1 Genbank gene 16855 17277 . + . ID=gene-HP17_08239;Name=HP17_08239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08239 AIHX01000063.1 Genbank CDS 16855 17277 . + 0 ID=cds-EIE29765.1;Parent=gene-HP17_08239;Dbxref=NCBI_GP:EIE29765.1;Name=EIE29765.1;Note=COG0319 Predicted metal-dependent hydrolase;gbkey=CDS;locus_tag=HP17_08239;product=metal-binding heat shock protein;protein_id=EIE29765.1;transl_table=11 AIHX01000063.1 Genbank gene 17521 18054 . - . ID=gene-HP17_08244;Name=HP17_08244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08244 AIHX01000063.1 Genbank CDS 17521 18054 . - 0 ID=cds-EIE29766.1;Parent=gene-HP17_08244;Dbxref=NCBI_GP:EIE29766.1;Name=EIE29766.1;Note=COG2184 Protein involved in cell division;gbkey=CDS;locus_tag=HP17_08244;product=cell filamentation protein;protein_id=EIE29766.1;transl_table=11 AIHX01000063.1 Genbank gene 18082 18855 . - . ID=gene-HP17_08249;Name=HP17_08249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08249 AIHX01000063.1 Genbank CDS 18082 18855 . - 0 ID=cds-EIE29767.1;Parent=gene-HP17_08249;Dbxref=NCBI_GP:EIE29767.1;Name=EIE29767.1;Note=COG0345 Pyrroline-5-carboxylate reductase;gbkey=CDS;locus_tag=HP17_08249;product=pyrroline-5-carboxylate reductase;protein_id=EIE29767.1;transl_table=11 AIHX01000063.1 Genbank gene 18870 20087 . - . ID=gene-HP17_08254;Name=HP17_08254;end_range=20087,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08254;partial=true AIHX01000063.1 Genbank CDS 18870 20087 . - 0 ID=cds-EIE29768.1;Parent=gene-HP17_08254;Dbxref=NCBI_GP:EIE29768.1;Name=EIE29768.1;end_range=20087,.;gbkey=CDS;locus_tag=HP17_08254;partial=true;product=outer membrane protein HopL;protein_id=EIE29768.1;transl_table=11 ##sequence-region AIHX01000064.1 1 14044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000064.1 Genbank region 1 14044 . + . ID=AIHX01000064.1:1..14044;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000064.1 Genbank gene 1729 2487 . - . ID=gene-HP17_08259;Name=HP17_08259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08259 AIHX01000064.1 Genbank CDS 1729 2487 . - 0 ID=cds-EIE29735.1;Parent=gene-HP17_08259;Dbxref=NCBI_GP:EIE29735.1;Name=EIE29735.1;gbkey=CDS;locus_tag=HP17_08259;product=Outer membrane protein;protein_id=EIE29735.1;transl_table=11 AIHX01000064.1 Genbank gene 2510 4603 . - . ID=gene-HP17_08264;Name=HP17_08264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08264 AIHX01000064.1 Genbank CDS 2510 4603 . - 0 ID=cds-EIE29736.1;Parent=gene-HP17_08264;Dbxref=NCBI_GP:EIE29736.1;Name=EIE29736.1;gbkey=CDS;locus_tag=HP17_08264;product=outer membrane protein HopI;protein_id=EIE29736.1;transl_table=11 AIHX01000064.1 Genbank gene 4711 5772 . - . ID=gene-HP17_08269;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=HP17_08269 AIHX01000064.1 Genbank CDS 4711 5772 . - 0 ID=cds-EIE29737.1;Parent=gene-HP17_08269;Dbxref=NCBI_GP:EIE29737.1;Name=EIE29737.1;Note=COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase;gbkey=CDS;gene=murG;locus_tag=HP17_08269;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=EIE29737.1;transl_table=11 AIHX01000064.1 Genbank gene 5784 6191 . - . ID=gene-HP17_08274;Name=HP17_08274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08274 AIHX01000064.1 Genbank CDS 5784 6191 . - 0 ID=cds-EIE29738.1;Parent=gene-HP17_08274;Dbxref=NCBI_GP:EIE29738.1;Name=EIE29738.1;Note=COG1699 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_08274;product=flagellar assembly protein FliW;protein_id=EIE29738.1;transl_table=11 AIHX01000064.1 Genbank gene 6328 8946 . + . ID=gene-HP17_08279;Name=valS;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=HP17_08279 AIHX01000064.1 Genbank CDS 6328 8946 . + 0 ID=cds-EIE29739.1;Parent=gene-HP17_08279;Dbxref=NCBI_GP:EIE29739.1;Name=EIE29739.1;Note=COG0525 Valyl-tRNA synthetase;gbkey=CDS;gene=valS;locus_tag=HP17_08279;product=valyl-tRNA synthetase;protein_id=EIE29739.1;transl_table=11 AIHX01000064.1 Genbank gene 8961 10307 . + . ID=gene-HP17_08284;Name=HP17_08284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08284 AIHX01000064.1 Genbank CDS 8961 10307 . + 0 ID=cds-EIE29740.1;Parent=gene-HP17_08284;Dbxref=NCBI_GP:EIE29740.1;Name=EIE29740.1;Note=COG0541 Signal recognition particle GTPase;gbkey=CDS;locus_tag=HP17_08284;product=signal recognition particle protein;protein_id=EIE29740.1;transl_table=11 AIHX01000064.1 Genbank gene 10381 10611 . + . ID=gene-HP17_08289;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HP17_08289 AIHX01000064.1 Genbank CDS 10381 10611 . + 0 ID=cds-EIE29741.1;Parent=gene-HP17_08289;Dbxref=NCBI_GP:EIE29741.1;Name=EIE29741.1;Note=COG0228 Ribosomal protein S16;gbkey=CDS;gene=rpsP;locus_tag=HP17_08289;product=30S ribosomal protein S16;protein_id=EIE29741.1;transl_table=11 AIHX01000064.1 Genbank gene 10628 10975 . + . ID=gene-HP17_08294;Name=HP17_08294;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08294 AIHX01000064.1 Genbank CDS 10628 10975 . + 0 ID=cds-EIE29742.1;Parent=gene-HP17_08294;Dbxref=NCBI_GP:EIE29742.1;Name=EIE29742.1;Note=COG1837 Predicted RNA-binding protein (contains KH domain);gbkey=CDS;locus_tag=HP17_08294;product=Hypothetical protein;protein_id=EIE29742.1;transl_table=11 AIHX01000064.1 Genbank gene 10976 11530 . + . ID=gene-HP17_08299;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=HP17_08299 AIHX01000064.1 Genbank CDS 10976 11530 . + 0 ID=cds-EIE29743.1;Parent=gene-HP17_08299;Dbxref=NCBI_GP:EIE29743.1;Name=EIE29743.1;Note=COG0806 RimM protein%2C required for 16S rRNA processing;gbkey=CDS;gene=rimM;locus_tag=HP17_08299;product=16S rRNA-processing protein RimM;protein_id=EIE29743.1;transl_table=11 AIHX01000064.1 Genbank gene 11531 12220 . + . ID=gene-HP17_08304;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=HP17_08304 AIHX01000064.1 Genbank CDS 11531 12220 . + 0 ID=cds-EIE29744.1;Parent=gene-HP17_08304;Dbxref=NCBI_GP:EIE29744.1;Name=EIE29744.1;Note=COG0336 tRNA-(guanine-N1)-methyltransferase;gbkey=CDS;gene=trmD;locus_tag=HP17_08304;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=EIE29744.1;transl_table=11 AIHX01000064.1 Genbank gene 12242 12598 . + . ID=gene-HP17_08309;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=HP17_08309 AIHX01000064.1 Genbank CDS 12242 12598 . + 0 ID=cds-EIE29745.1;Parent=gene-HP17_08309;Dbxref=NCBI_GP:EIE29745.1;Name=EIE29745.1;Note=COG0335 Ribosomal protein L19;gbkey=CDS;gene=rplS;locus_tag=HP17_08309;product=50S ribosomal protein L19;protein_id=EIE29745.1;transl_table=11 AIHX01000064.1 Genbank gene 12870 13757 . + . ID=gene-HP17_08314;Name=HP17_08314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08314 AIHX01000064.1 Genbank CDS 12870 13757 . + 0 ID=cds-EIE29746.1;Parent=gene-HP17_08314;Dbxref=NCBI_GP:EIE29746.1;Name=EIE29746.1;Note=COG1432 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_08314;product=Hypothetical protein;protein_id=EIE29746.1;transl_table=11 AIHX01000064.1 Genbank gene 13837 13983 . + . ID=gene-HP17_08319;Name=HP17_08319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08319 AIHX01000064.1 Genbank CDS 13837 13983 . + 0 ID=cds-EIE29747.1;Parent=gene-HP17_08319;Dbxref=NCBI_GP:EIE29747.1;Name=EIE29747.1;gbkey=CDS;locus_tag=HP17_08319;product=Hypothetical protein;protein_id=EIE29747.1;transl_table=11 ##sequence-region AIHX01000065.1 1 12694 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000065.1 Genbank region 1 12694 . + . ID=AIHX01000065.1:1..12694;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000065.1 Genbank gene 10 345 . - . ID=gene-HP17_08324;Name=HP17_08324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08324 AIHX01000065.1 Genbank CDS 10 345 . - 0 ID=cds-EIE29716.1;Parent=gene-HP17_08324;Dbxref=NCBI_GP:EIE29716.1;Name=EIE29716.1;gbkey=CDS;locus_tag=HP17_08324;product=Hypothetical protein;protein_id=EIE29716.1;transl_table=11 AIHX01000065.1 Genbank gene 356 1120 . - . ID=gene-HP17_08329;Name=HP17_08329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08329 AIHX01000065.1 Genbank CDS 356 1120 . - 0 ID=cds-EIE29717.1;Parent=gene-HP17_08329;Dbxref=NCBI_GP:EIE29717.1;Name=EIE29717.1;gbkey=CDS;locus_tag=HP17_08329;product=Hypothetical protein;protein_id=EIE29717.1;transl_table=11 AIHX01000065.1 Genbank gene 1383 2282 . + . ID=gene-HP17_08334;Name=HP17_08334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08334 AIHX01000065.1 Genbank CDS 1383 2282 . + 0 ID=cds-EIE29718.1;Parent=gene-HP17_08334;Dbxref=NCBI_GP:EIE29718.1;Name=EIE29718.1;Note=COG0760 Parvulin-like peptidyl-prolyl isomerase;gbkey=CDS;locus_tag=HP17_08334;product=peptidyl-prolyl cis-trans isomerase C;protein_id=EIE29718.1;transl_table=11 AIHX01000065.1 Genbank gene 2300 3223 . + . ID=gene-HP17_08339;Name=HP17_08339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08339 AIHX01000065.1 Genbank CDS 2300 3223 . + 0 ID=cds-EIE29719.1;Parent=gene-HP17_08339;Dbxref=NCBI_GP:EIE29719.1;Name=EIE29719.1;Note=COG0191 Fructose/tagatose bisphosphate aldolase;gbkey=CDS;locus_tag=HP17_08339;product=fructose-bisphosphate aldolase;protein_id=EIE29719.1;transl_table=11 AIHX01000065.1 Genbank gene 3245 3808 . + . ID=gene-HP17_08344;Name=HP17_08344;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08344 AIHX01000065.1 Genbank CDS 3245 3808 . + 0 ID=cds-EIE29720.1;Parent=gene-HP17_08344;Dbxref=NCBI_GP:EIE29720.1;Name=EIE29720.1;Note=COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A);gbkey=CDS;locus_tag=HP17_08344;product=elongation factor P;protein_id=EIE29720.1;transl_table=11 AIHX01000065.1 Genbank pseudogene 4290 4797 . - . ID=gene-HP17_08349;Name=HP17_08349;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_08349;pseudo=true AIHX01000065.1 Genbank sequence_feature 4290 4797 . - . ID=id-HP17_08349;Note=potential frameshift: common BLAST hit: gb|ABF85607.1|ref|YP_628281.1| MobC-like protein;gbkey=misc_feature;locus_tag=HP17_08349;pseudo=true AIHX01000065.1 Genbank gene 4938 5219 . + . ID=gene-HP17_08359;Name=HP17_08359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08359 AIHX01000065.1 Genbank CDS 4938 5219 . + 0 ID=cds-EIE29721.1;Parent=gene-HP17_08359;Dbxref=NCBI_GP:EIE29721.1;Name=EIE29721.1;gbkey=CDS;locus_tag=HP17_08359;product=Hypothetical protein;protein_id=EIE29721.1;transl_table=11 AIHX01000065.1 Genbank gene 5228 5497 . + . ID=gene-HP17_08364;Name=HP17_08364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08364 AIHX01000065.1 Genbank CDS 5228 5497 . + 0 ID=cds-EIE29722.1;Parent=gene-HP17_08364;Dbxref=NCBI_GP:EIE29722.1;Name=EIE29722.1;Note=COG3041 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_08364;product=Hypothetical protein;protein_id=EIE29722.1;transl_table=11 AIHX01000065.1 Genbank gene 5696 6466 . + . ID=gene-HP17_08369;Name=HP17_08369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08369 AIHX01000065.1 Genbank CDS 5696 6466 . + 0 ID=cds-EIE29723.1;Parent=gene-HP17_08369;Dbxref=NCBI_GP:EIE29723.1;Name=EIE29723.1;gbkey=CDS;locus_tag=HP17_08369;product=Hypothetical protein;protein_id=EIE29723.1;transl_table=11 AIHX01000065.1 Genbank gene 6441 7787 . + . ID=gene-HP17_08374;Name=HP17_08374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08374 AIHX01000065.1 Genbank CDS 6441 7787 . + 0 ID=cds-EIE29724.1;Parent=gene-HP17_08374;Dbxref=NCBI_GP:EIE29724.1;Name=EIE29724.1;Note=COG1222 ATP-dependent 26S proteasome regulatory subunit;gbkey=CDS;locus_tag=HP17_08374;product=restriction enzyme;protein_id=EIE29724.1;transl_table=11 AIHX01000065.1 Genbank gene 7780 8994 . + . ID=gene-HP17_08379;Name=HP17_08379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08379 AIHX01000065.1 Genbank CDS 7780 8994 . + 0 ID=cds-EIE29725.1;Parent=gene-HP17_08379;Dbxref=NCBI_GP:EIE29725.1;Name=EIE29725.1;gbkey=CDS;locus_tag=HP17_08379;product=Hypothetical protein;protein_id=EIE29725.1;transl_table=11 AIHX01000065.1 Genbank gene 9071 10093 . - . ID=gene-HP17_08384;Name=HP17_08384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08384 AIHX01000065.1 Genbank CDS 9071 10093 . - 0 ID=cds-EIE29726.1;Parent=gene-HP17_08384;Dbxref=NCBI_GP:EIE29726.1;Name=EIE29726.1;Note=COG2089 Sialic acid synthase;gbkey=CDS;locus_tag=HP17_08384;product=sialic acid synthase;protein_id=EIE29726.1;transl_table=11 AIHX01000065.1 Genbank gene 10097 10738 . - . ID=gene-HP17_08389;Name=HP17_08389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08389 AIHX01000065.1 Genbank CDS 10097 10738 . - 0 ID=cds-EIE29727.1;Parent=gene-HP17_08389;Dbxref=NCBI_GP:EIE29727.1;Name=EIE29727.1;Note=COG1136 ABC-type antimicrobial peptide transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_08389;product=ABC transporter;protein_id=EIE29727.1;transl_table=11 AIHX01000065.1 Genbank gene 10738 12012 . - . ID=gene-HP17_08394;Name=HP17_08394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08394 AIHX01000065.1 Genbank CDS 10738 12012 . - 0 ID=cds-EIE29728.1;Parent=gene-HP17_08394;Dbxref=NCBI_GP:EIE29728.1;Name=EIE29728.1;Note=COG0815 Apolipoprotein N-acyltransferase;gbkey=CDS;locus_tag=HP17_08394;product=apolipoprotein N-acyltransferase;protein_id=EIE29728.1;transl_table=11 AIHX01000065.1 Genbank gene 12081 12245 . + . ID=gene-HP17_08399;Name=HP17_08399;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08399 AIHX01000065.1 Genbank CDS 12081 12245 . + 0 ID=cds-EIE29729.1;Parent=gene-HP17_08399;Dbxref=NCBI_GP:EIE29729.1;Name=EIE29729.1;gbkey=CDS;locus_tag=HP17_08399;product=Hypothetical protein;protein_id=EIE29729.1;transl_table=11 AIHX01000065.1 Genbank gene 12249 12694 . + . ID=gene-HP17_08404;Name=HP17_08404;end_range=12694,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08404;partial=true AIHX01000065.1 Genbank CDS 12249 12694 . + 0 ID=cds-EIE29730.1;Parent=gene-HP17_08404;Dbxref=NCBI_GP:EIE29730.1;Name=EIE29730.1;Note=COG1286 Uncharacterized membrane protein%2C required for colicin V production;end_range=12694,.;gbkey=CDS;locus_tag=HP17_08404;partial=true;product=Hypothetical protein;protein_id=EIE29730.1;transl_table=11 ##sequence-region AIHX01000066.1 1 11339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000066.1 Genbank region 1 11339 . + . ID=AIHX01000066.1:1..11339;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000066.1 Genbank gene 1 360 . - . ID=gene-HP17_00825;Name=HP17_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00825;partial=true;start_range=.,1 AIHX01000066.1 Genbank CDS 1 360 . - 0 ID=cds-EIE29705.1;Parent=gene-HP17_00825;Dbxref=NCBI_GP:EIE29705.1;Name=EIE29705.1;gbkey=CDS;locus_tag=HP17_00825;partial=true;product=Hypothetical protein;protein_id=EIE29705.1;start_range=.,1;transl_table=11 AIHX01000066.1 Genbank gene 456 986 . - . ID=gene-HP17_00830;Name=HP17_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00830 AIHX01000066.1 Genbank CDS 456 986 . - 0 ID=cds-EIE29706.1;Parent=gene-HP17_00830;Dbxref=NCBI_GP:EIE29706.1;Name=EIE29706.1;gbkey=CDS;locus_tag=HP17_00830;product=Hypothetical protein;protein_id=EIE29706.1;transl_table=11 AIHX01000066.1 Genbank gene 1059 2003 . + . ID=gene-HP17_00835;Name=HP17_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00835 AIHX01000066.1 Genbank CDS 1059 2003 . + 0 ID=cds-EIE29707.1;Parent=gene-HP17_00835;Dbxref=NCBI_GP:EIE29707.1;Name=EIE29707.1;Note=COG1052 Lactate dehydrogenase and related dehydrogenases;gbkey=CDS;locus_tag=HP17_00835;product=2-hydroxyacid dehydrogenase;protein_id=EIE29707.1;transl_table=11 AIHX01000066.1 Genbank gene 2216 2929 . - . ID=gene-HP17_00840;Name=HP17_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00840 AIHX01000066.1 Genbank CDS 2216 2929 . - 0 ID=cds-EIE29708.1;Parent=gene-HP17_00840;Dbxref=NCBI_GP:EIE29708.1;Name=EIE29708.1;gbkey=CDS;locus_tag=HP17_00840;product=Hypothetical protein;protein_id=EIE29708.1;transl_table=11 AIHX01000066.1 Genbank gene 3034 4494 . - . ID=gene-HP17_00845;Name=HP17_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00845 AIHX01000066.1 Genbank CDS 3034 4494 . - 0 ID=cds-EIE29709.1;Parent=gene-HP17_00845;Dbxref=NCBI_GP:EIE29709.1;Name=EIE29709.1;Note=COG0498 Threonine synthase;gbkey=CDS;locus_tag=HP17_00845;product=threonine synthase;protein_id=EIE29709.1;transl_table=11 AIHX01000066.1 Genbank gene 4705 6732 . + . ID=gene-HP17_00850;Name=HP17_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00850 AIHX01000066.1 Genbank CDS 4705 6732 . + 0 ID=cds-EIE29710.1;Parent=gene-HP17_00850;Dbxref=NCBI_GP:EIE29710.1;Name=EIE29710.1;Note=COG0840 Methyl-accepting chemotaxis protein;gbkey=CDS;locus_tag=HP17_00850;product=methyl-accepting chemotaxis protein;protein_id=EIE29710.1;transl_table=11 AIHX01000066.1 Genbank gene 6732 7838 . + . ID=gene-HP17_00855;Name=HP17_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00855 AIHX01000066.1 Genbank CDS 6732 7838 . + 0 ID=cds-EIE29711.1;Parent=gene-HP17_00855;Dbxref=NCBI_GP:EIE29711.1;Name=EIE29711.1;Note=COG1636 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_00855;product=Hypothetical protein;protein_id=EIE29711.1;transl_table=11 AIHX01000066.1 Genbank gene 8054 8815 . + . ID=gene-HP17_00860;Name=HP17_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00860 AIHX01000066.1 Genbank CDS 8054 8815 . + 0 ID=cds-EIE29712.1;Parent=gene-HP17_00860;Dbxref=NCBI_GP:EIE29712.1;Name=EIE29712.1;gbkey=CDS;locus_tag=HP17_00860;product=Hypothetical protein;protein_id=EIE29712.1;transl_table=11 AIHX01000066.1 Genbank gene 8798 9580 . - . ID=gene-HP17_00865;Name=HP17_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00865 AIHX01000066.1 Genbank CDS 8798 9580 . - 0 ID=cds-EIE29713.1;Parent=gene-HP17_00865;Dbxref=NCBI_GP:EIE29713.1;Name=EIE29713.1;Note=COG0463 Glycosyltransferases involved in cell wall biogenesis;gbkey=CDS;locus_tag=HP17_00865;product=Hypothetical protein;protein_id=EIE29713.1;transl_table=11 AIHX01000066.1 Genbank gene 9610 11307 . - . ID=gene-HP17_00870;Name=HP17_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00870 AIHX01000066.1 Genbank CDS 9610 11307 . - 0 ID=cds-EIE29714.1;Parent=gene-HP17_00870;Dbxref=NCBI_GP:EIE29714.1;Name=EIE29714.1;Note=COG0840 Methyl-accepting chemotaxis protein;gbkey=CDS;locus_tag=HP17_00870;product=methyl-accepting chemotaxis protein;protein_id=EIE29714.1;transl_table=11 ##sequence-region AIHX01000067.1 1 1194 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000067.1 Genbank region 1 1194 . + . ID=AIHX01000067.1:1..1194;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000067.1 Genbank gene 1 1178 . + . ID=gene-HP17_08409;Name=HP17_08409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08409;partial=true;start_range=.,1 AIHX01000067.1 Genbank CDS 1 1178 . + 2 ID=cds-EIE29678.1;Parent=gene-HP17_08409;Dbxref=NCBI_GP:EIE29678.1;Name=EIE29678.1;Note=COG0675 Transposase and inactivated derivatives;gbkey=CDS;locus_tag=HP17_08409;partial=true;product=transposase B;protein_id=EIE29678.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000068.1 1 3517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000068.1 Genbank region 1 3517 . + . ID=AIHX01000068.1:1..3517;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000068.1 Genbank gene 1 1315 . - . ID=gene-HP17_08414;Name=HP17_08414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08414;partial=true;start_range=.,1 AIHX01000068.1 Genbank CDS 1 1315 . - 0 ID=cds-EIE29673.1;Parent=gene-HP17_08414;Dbxref=NCBI_GP:EIE29673.1;Name=EIE29673.1;Note=COG0495 Leucyl-tRNA synthetase;gbkey=CDS;locus_tag=HP17_08414;partial=true;product=Hypothetical protein;protein_id=EIE29673.1;start_range=.,1;transl_table=11 AIHX01000068.1 Genbank gene 1376 2674 . - . ID=gene-HP17_08419;Name=HP17_08419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08419 AIHX01000068.1 Genbank CDS 1376 2674 . - 0 ID=cds-EIE29674.1;Parent=gene-HP17_08419;Dbxref=NCBI_GP:EIE29674.1;Name=EIE29674.1;Note=COG4487 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_08419;product=Hypothetical protein;protein_id=EIE29674.1;transl_table=11 AIHX01000068.1 Genbank gene 2882 3337 . + . ID=gene-HP17_08424;Name=HP17_08424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08424 AIHX01000068.1 Genbank CDS 2882 3337 . + 0 ID=cds-EIE29675.1;Parent=gene-HP17_08424;Dbxref=NCBI_GP:EIE29675.1;Name=EIE29675.1;gbkey=CDS;locus_tag=HP17_08424;product=Hypothetical protein;protein_id=EIE29675.1;transl_table=11 AIHX01000068.1 Genbank gene 3326 3517 . - . ID=gene-HP17_08429;Name=HP17_08429;end_range=3517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08429;partial=true AIHX01000068.1 Genbank CDS 3326 3517 . - 0 ID=cds-EIE29676.1;Parent=gene-HP17_08429;Dbxref=NCBI_GP:EIE29676.1;Name=EIE29676.1;Note=not present in 26695~not present in J99;end_range=3517,.;gbkey=CDS;locus_tag=HP17_08429;partial=true;product=Hypothetical protein;protein_id=EIE29676.1;transl_table=11 ##sequence-region AIHX01000069.1 1 6817 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000069.1 Genbank region 1 6817 . + . ID=AIHX01000069.1:1..6817;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000069.1 Genbank gene 134 685 . + . ID=gene-HP17_08434;Name=HP17_08434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08434 AIHX01000069.1 Genbank CDS 134 685 . + 0 ID=cds-EIE29639.1;Parent=gene-HP17_08434;Dbxref=NCBI_GP:EIE29639.1;Name=EIE29639.1;Note=COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478%2C contains von Willebrand factor (vWF) domain;gbkey=CDS;locus_tag=HP17_08434;product=phage/colicin/tellurite resistance cluster Y protein;protein_id=EIE29639.1;transl_table=11 AIHX01000069.1 Genbank gene 678 776 . + . ID=gene-HP17_08439;Name=HP17_08439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08439 AIHX01000069.1 Genbank CDS 678 776 . + 0 ID=cds-EIE29640.1;Parent=gene-HP17_08439;Dbxref=NCBI_GP:EIE29640.1;Name=EIE29640.1;gbkey=CDS;locus_tag=HP17_08439;product=Hypothetical protein;protein_id=EIE29640.1;transl_table=11 AIHX01000069.1 Genbank gene 773 1120 . + . ID=gene-HP17_08444;Name=HP17_08444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08444 AIHX01000069.1 Genbank CDS 773 1120 . + 0 ID=cds-EIE29641.1;Parent=gene-HP17_08444;Dbxref=NCBI_GP:EIE29641.1;Name=EIE29641.1;gbkey=CDS;locus_tag=HP17_08444;product=Hypothetical protein;protein_id=EIE29641.1;transl_table=11 AIHX01000069.1 Genbank gene 1083 1652 . + . ID=gene-HP17_08449;Name=HP17_08449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08449 AIHX01000069.1 Genbank CDS 1083 1652 . + 0 ID=cds-EIE29642.1;Parent=gene-HP17_08449;Dbxref=NCBI_GP:EIE29642.1;Name=EIE29642.1;gbkey=CDS;locus_tag=HP17_08449;product=Hypothetical protein;protein_id=EIE29642.1;transl_table=11 AIHX01000069.1 Genbank gene 1655 1849 . + . ID=gene-HP17_08454;Name=HP17_08454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08454 AIHX01000069.1 Genbank CDS 1655 1849 . + 0 ID=cds-EIE29643.1;Parent=gene-HP17_08454;Dbxref=NCBI_GP:EIE29643.1;Name=EIE29643.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_08454;product=Hypothetical protein;protein_id=EIE29643.1;transl_table=11 AIHX01000069.1 Genbank gene 1833 2147 . + . ID=gene-HP17_08459;Name=HP17_08459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08459 AIHX01000069.1 Genbank CDS 1833 2147 . + 0 ID=cds-EIE29644.1;Parent=gene-HP17_08459;Dbxref=NCBI_GP:EIE29644.1;Name=EIE29644.1;gbkey=CDS;locus_tag=HP17_08459;product=Hypothetical protein;protein_id=EIE29644.1;transl_table=11 AIHX01000069.1 Genbank gene 2214 2468 . + . ID=gene-HP17_08464;Name=HP17_08464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08464 AIHX01000069.1 Genbank CDS 2214 2468 . + 0 ID=cds-EIE29645.1;Parent=gene-HP17_08464;Dbxref=NCBI_GP:EIE29645.1;Name=EIE29645.1;gbkey=CDS;locus_tag=HP17_08464;product=Hypothetical protein;protein_id=EIE29645.1;transl_table=11 AIHX01000069.1 Genbank gene 2458 2673 . + . ID=gene-HP17_08469;Name=HP17_08469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08469 AIHX01000069.1 Genbank CDS 2458 2673 . + 0 ID=cds-EIE29646.1;Parent=gene-HP17_08469;Dbxref=NCBI_GP:EIE29646.1;Name=EIE29646.1;gbkey=CDS;locus_tag=HP17_08469;product=Hypothetical protein;protein_id=EIE29646.1;transl_table=11 AIHX01000069.1 Genbank gene 2738 2950 . + . ID=gene-HP17_08474;Name=HP17_08474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08474 AIHX01000069.1 Genbank CDS 2738 2950 . + 0 ID=cds-EIE29647.1;Parent=gene-HP17_08474;Dbxref=NCBI_GP:EIE29647.1;Name=EIE29647.1;gbkey=CDS;locus_tag=HP17_08474;product=Hypothetical protein;protein_id=EIE29647.1;transl_table=11 AIHX01000069.1 Genbank gene 2947 3624 . + . ID=gene-HP17_08479;Name=HP17_08479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08479 AIHX01000069.1 Genbank CDS 2947 3624 . + 0 ID=cds-EIE29648.1;Parent=gene-HP17_08479;Dbxref=NCBI_GP:EIE29648.1;Name=EIE29648.1;gbkey=CDS;locus_tag=HP17_08479;product=Hypothetical protein;protein_id=EIE29648.1;transl_table=11 AIHX01000069.1 Genbank gene 3664 3813 . + . ID=gene-HP17_08484;Name=HP17_08484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08484 AIHX01000069.1 Genbank CDS 3664 3813 . + 0 ID=cds-EIE29649.1;Parent=gene-HP17_08484;Dbxref=NCBI_GP:EIE29649.1;Name=EIE29649.1;gbkey=CDS;locus_tag=HP17_08484;product=type II restriction endonuclease;protein_id=EIE29649.1;transl_table=11 AIHX01000069.1 Genbank gene 3965 4180 . - . ID=gene-HP17_08489;Name=HP17_08489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08489 AIHX01000069.1 Genbank CDS 3965 4180 . - 0 ID=cds-EIE29650.1;Parent=gene-HP17_08489;Dbxref=NCBI_GP:EIE29650.1;Name=EIE29650.1;gbkey=CDS;locus_tag=HP17_08489;product=Hypothetical protein;protein_id=EIE29650.1;transl_table=11 AIHX01000069.1 Genbank gene 4226 4435 . - . ID=gene-HP17_08494;Name=HP17_08494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08494 AIHX01000069.1 Genbank CDS 4226 4435 . - 0 ID=cds-EIE29651.1;Parent=gene-HP17_08494;Dbxref=NCBI_GP:EIE29651.1;Name=EIE29651.1;gbkey=CDS;locus_tag=HP17_08494;product=Hypothetical protein;protein_id=EIE29651.1;transl_table=11 AIHX01000069.1 Genbank gene 4467 5291 . - . ID=gene-HP17_08499;Name=HP17_08499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08499 AIHX01000069.1 Genbank CDS 4467 5291 . - 0 ID=cds-EIE29652.1;Parent=gene-HP17_08499;Dbxref=NCBI_GP:EIE29652.1;Name=EIE29652.1;Note=COG0668 Small-conductance mechanosensitive channel;gbkey=CDS;locus_tag=HP17_08499;product=Hypothetical protein;protein_id=EIE29652.1;transl_table=11 AIHX01000069.1 Genbank gene 5475 5591 . + . ID=gene-HP17_08504;Name=HP17_08504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08504 AIHX01000069.1 Genbank CDS 5475 5591 . + 0 ID=cds-EIE29653.1;Parent=gene-HP17_08504;Dbxref=NCBI_GP:EIE29653.1;Name=EIE29653.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_08504;product=Hypothetical protein;protein_id=EIE29653.1;transl_table=11 AIHX01000069.1 Genbank gene 6241 6768 . - . ID=gene-HP17_08509;Name=HP17_08509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08509 AIHX01000069.1 Genbank CDS 6241 6768 . - 0 ID=cds-EIE29654.1;Parent=gene-HP17_08509;Dbxref=NCBI_GP:EIE29654.1;Name=EIE29654.1;gbkey=CDS;locus_tag=HP17_08509;product=Hypothetical protein;protein_id=EIE29654.1;transl_table=11 ##sequence-region AIHX01000070.1 1 2128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000070.1 Genbank region 1 2128 . + . ID=AIHX01000070.1:1..2128;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000070.1 Genbank gene 489 1996 . + . ID=gene-HP17_r08516;Name=HP17_r08516;gbkey=Gene;gene_biotype=rRNA;locus_tag=HP17_r08516 AIHX01000070.1 Genbank rRNA 489 1996 . + . ID=rna-HP17_r08516;Parent=gene-HP17_r08516;gbkey=rRNA;locus_tag=HP17_r08516;product=16S ribosomal RNA AIHX01000070.1 Genbank exon 489 1996 . + . ID=exon-HP17_r08516-1;Parent=rna-HP17_r08516;gbkey=rRNA;locus_tag=HP17_r08516;product=16S ribosomal RNA ##sequence-region AIHX01000071.1 1 1916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000071.1 Genbank region 1 1916 . + . ID=AIHX01000071.1:1..1916;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000071.1 Genbank gene 1 505 . - . ID=gene-HP17_08516;Name=HP17_08516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08516;partial=true;start_range=.,1 AIHX01000071.1 Genbank CDS 1 505 . - 0 ID=cds-EIE29621.1;Parent=gene-HP17_08516;Dbxref=NCBI_GP:EIE29621.1;Name=EIE29621.1;Note=COG0732 Restriction endonuclease S subunits;gbkey=CDS;locus_tag=HP17_08516;partial=true;product=Putative restriction endonuclease;protein_id=EIE29621.1;start_range=.,1;transl_table=11 AIHX01000071.1 Genbank gene 546 1916 . - . ID=gene-HP17_08521;Name=HP17_08521;end_range=1916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08521;partial=true AIHX01000071.1 Genbank CDS 546 1916 . - 0 ID=cds-EIE29622.1;Parent=gene-HP17_08521;Dbxref=NCBI_GP:EIE29622.1;Name=EIE29622.1;Note=COG2217 Cation transport ATPase;end_range=1916,.;gbkey=CDS;locus_tag=HP17_08521;partial=true;product=Cadmium%2C zinc and cobalt-transporting ATPase;protein_id=EIE29622.1;transl_table=11 ##sequence-region AIHX01000072.1 1 30962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000072.1 Genbank region 1 30962 . + . ID=AIHX01000072.1:1..30962;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000072.1 Genbank gene 1 430 . - . ID=gene-HP17_08526;Name=HP17_08526;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08526;partial=true;start_range=.,1 AIHX01000072.1 Genbank CDS 1 430 . - 0 ID=cds-EIE29579.1;Parent=gene-HP17_08526;Dbxref=NCBI_GP:EIE29579.1;Name=EIE29579.1;Note=COG2217 Cation transport ATPase;gbkey=CDS;locus_tag=HP17_08526;partial=true;product=cadmium-transporting ATPase;protein_id=EIE29579.1;start_range=.,1;transl_table=11 AIHX01000072.1 Genbank gene 450 647 . - . ID=gene-HP17_08531;Name=HP17_08531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08531 AIHX01000072.1 Genbank CDS 450 647 . - 0 ID=cds-EIE29580.1;Parent=gene-HP17_08531;Dbxref=NCBI_GP:EIE29580.1;Name=EIE29580.1;Note=COG2217 Cation transport ATPase;gbkey=CDS;locus_tag=HP17_08531;product=cadmium-transporting ATPase;protein_id=EIE29580.1;transl_table=11 AIHX01000072.1 Genbank gene 672 2192 . - . ID=gene-HP17_08536;Name=HP17_08536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08536 AIHX01000072.1 Genbank CDS 672 2192 . - 0 ID=cds-EIE29581.1;Parent=gene-HP17_08536;Dbxref=NCBI_GP:EIE29581.1;Name=EIE29581.1;Note=COG0606 Predicted ATPase with chaperone activity;gbkey=CDS;locus_tag=HP17_08536;product=Mg chelatase-related protein;protein_id=EIE29581.1;transl_table=11 AIHX01000072.1 Genbank gene 2198 2722 . - . ID=gene-HP17_08541;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=HP17_08541 AIHX01000072.1 Genbank CDS 2198 2722 . - 0 ID=cds-EIE29582.1;Parent=gene-HP17_08541;Dbxref=NCBI_GP:EIE29582.1;Name=EIE29582.1;Note=COG0242 N-formylmethionyl-tRNA deformylase;gbkey=CDS;gene=def;locus_tag=HP17_08541;product=peptide deformylase;protein_id=EIE29582.1;transl_table=11 AIHX01000072.1 Genbank gene 2727 3314 . - . ID=gene-HP17_08546;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=HP17_08546 AIHX01000072.1 Genbank CDS 2727 3314 . - 0 ID=cds-EIE29583.1;Parent=gene-HP17_08546;Dbxref=NCBI_GP:EIE29583.1;Name=EIE29583.1;Note=COG0740 Protease subunit of ATP-dependent Clp proteases;gbkey=CDS;gene=clpP;locus_tag=HP17_08546;product=ATP-dependent Clp protease proteolytic subunit;protein_id=EIE29583.1;transl_table=11 AIHX01000072.1 Genbank gene 3335 4690 . - . ID=gene-HP17_08551;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=HP17_08551 AIHX01000072.1 Genbank CDS 3335 4690 . - 0 ID=cds-EIE29584.1;Parent=gene-HP17_08551;Dbxref=NCBI_GP:EIE29584.1;Name=EIE29584.1;Note=COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor);gbkey=CDS;gene=tig;locus_tag=HP17_08551;product=trigger factor;protein_id=EIE29584.1;transl_table=11 AIHX01000072.1 Genbank gene 4802 5638 . - . ID=gene-HP17_08556;Name=HP17_08556;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08556 AIHX01000072.1 Genbank CDS 4802 5638 . - 0 ID=cds-EIE29585.1;Parent=gene-HP17_08556;Dbxref=NCBI_GP:EIE29585.1;Name=EIE29585.1;gbkey=CDS;locus_tag=HP17_08556;product=outer membrane protein HorG;protein_id=EIE29585.1;transl_table=11 AIHX01000072.1 Genbank gene 5667 6449 . - . ID=gene-HP17_08561;Name=HP17_08561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08561 AIHX01000072.1 Genbank CDS 5667 6449 . - 0 ID=cds-EIE29586.1;Parent=gene-HP17_08561;Dbxref=NCBI_GP:EIE29586.1;Name=EIE29586.1;gbkey=CDS;locus_tag=HP17_08561;product=Neuraminyllactose-binding hemagglutinin HpaA;protein_id=EIE29586.1;transl_table=11 AIHX01000072.1 Genbank gene 6568 7044 . - . ID=gene-HP17_08566;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=HP17_08566 AIHX01000072.1 Genbank CDS 6568 7044 . - 0 ID=cds-EIE29587.1;Parent=gene-HP17_08566;Dbxref=NCBI_GP:EIE29587.1;Name=EIE29587.1;Note=COG0315 Molybdenum cofactor biosynthesis enzyme;gbkey=CDS;gene=moaC;locus_tag=HP17_08566;product=molybdenum cofactor biosynthesis protein MoaC;protein_id=EIE29587.1;transl_table=11 AIHX01000072.1 Genbank gene 7053 7583 . - . ID=gene-HP17_08571;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=HP17_08571 AIHX01000072.1 Genbank CDS 7053 7583 . - 0 ID=cds-EIE29588.1;Parent=gene-HP17_08571;Dbxref=NCBI_GP:EIE29588.1;Name=EIE29588.1;Note=COG0521 Molybdopterin biosynthesis enzymes;gbkey=CDS;gene=mogA;locus_tag=HP17_08571;product=molybdenum cofactor biosynthesis protein MogA;protein_id=EIE29588.1;transl_table=11 AIHX01000072.1 Genbank gene 7596 8033 . - . ID=gene-HP17_08576;Name=HP17_08576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08576 AIHX01000072.1 Genbank CDS 7596 8033 . - 0 ID=cds-EIE29589.1;Parent=gene-HP17_08576;Dbxref=NCBI_GP:EIE29589.1;Name=EIE29589.1;Note=COG0314 Molybdopterin converting factor%2C large subunit;gbkey=CDS;locus_tag=HP17_08576;product=molybdopterin converting factor%2C subunit 2;protein_id=EIE29589.1;transl_table=11 AIHX01000072.1 Genbank gene 8034 8255 . - . ID=gene-HP17_08581;Name=HP17_08581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08581 AIHX01000072.1 Genbank CDS 8034 8255 . - 0 ID=cds-EIE29590.1;Parent=gene-HP17_08581;Dbxref=NCBI_GP:EIE29590.1;Name=EIE29590.1;Note=COG1977 Molybdopterin converting factor%2C small subunit;gbkey=CDS;locus_tag=HP17_08581;product=molybdopterin converting factor%2C subunit 1 (moaD);protein_id=EIE29590.1;transl_table=11 AIHX01000072.1 Genbank gene 8327 8905 . - . ID=gene-HP17_08586;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=HP17_08586 AIHX01000072.1 Genbank CDS 8327 8905 . - 0 ID=cds-EIE29591.1;Parent=gene-HP17_08586;Dbxref=NCBI_GP:EIE29591.1;Name=EIE29591.1;Note=COG0807 GTP cyclohydrolase II;gbkey=CDS;gene=ribA;locus_tag=HP17_08586;product=GTP cyclohydrolase II;protein_id=EIE29591.1;transl_table=11 AIHX01000072.1 Genbank gene 8874 9086 . + . ID=gene-HP17_08591;Name=HP17_08591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08591 AIHX01000072.1 Genbank CDS 8874 9086 . + 0 ID=cds-EIE29592.1;Parent=gene-HP17_08591;Dbxref=NCBI_GP:EIE29592.1;Name=EIE29592.1;gbkey=CDS;locus_tag=HP17_08591;product=Hypothetical protein;protein_id=EIE29592.1;transl_table=11 AIHX01000072.1 Genbank gene 9239 9370 . - . ID=gene-HP17_08596;Name=HP17_08596;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08596 AIHX01000072.1 Genbank CDS 9239 9370 . - 0 ID=cds-EIE29593.1;Parent=gene-HP17_08596;Dbxref=NCBI_GP:EIE29593.1;Name=EIE29593.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_08596;product=Hypothetical protein;protein_id=EIE29593.1;transl_table=11 AIHX01000072.1 Genbank gene 10096 10233 . - . ID=gene-HP17_08601;Name=HP17_08601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08601 AIHX01000072.1 Genbank CDS 10096 10233 . - 0 ID=cds-EIE29594.1;Parent=gene-HP17_08601;Dbxref=NCBI_GP:EIE29594.1;Name=EIE29594.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_08601;product=Hypothetical protein;protein_id=EIE29594.1;transl_table=11 AIHX01000072.1 Genbank gene 10312 11346 . - . ID=gene-HP17_08606;Name=HP17_08606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08606 AIHX01000072.1 Genbank CDS 10312 11346 . - 0 ID=cds-EIE29595.1;Parent=gene-HP17_08606;Dbxref=NCBI_GP:EIE29595.1;Name=EIE29595.1;Note=COG0108 3%2C4-dihydroxy-2-butanone 4-phosphate synthase;gbkey=CDS;locus_tag=HP17_08606;product=bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein;protein_id=EIE29595.1;transl_table=11 AIHX01000072.1 Genbank gene 11551 12399 . - . ID=gene-HP17_08611;Name=HP17_08611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08611 AIHX01000072.1 Genbank CDS 11551 12399 . - 0 ID=cds-EIE29596.1;Parent=gene-HP17_08611;Dbxref=NCBI_GP:EIE29596.1;Name=EIE29596.1;Note=COG3306 Glycosyltransferase involved in LPS biosynthesis;gbkey=CDS;locus_tag=HP17_08611;product=lipooligosaccharide 5G8 epitope biosynthesis-associated protein;protein_id=EIE29596.1;transl_table=11 AIHX01000072.1 Genbank gene 12757 13692 . - . ID=gene-HP17_08616;Name=HP17_08616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08616 AIHX01000072.1 Genbank CDS 12757 13692 . - 0 ID=cds-EIE29597.1;Parent=gene-HP17_08616;Dbxref=NCBI_GP:EIE29597.1;Name=EIE29597.1;Note=COG0492 Thioredoxin reductase;gbkey=CDS;locus_tag=HP17_08616;product=thioredoxin reductase;protein_id=EIE29597.1;transl_table=11 AIHX01000072.1 Genbank gene 13697 14017 . - . ID=gene-HP17_08621;Name=HP17_08621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08621 AIHX01000072.1 Genbank CDS 13697 14017 . - 0 ID=cds-EIE29598.1;Parent=gene-HP17_08621;Dbxref=NCBI_GP:EIE29598.1;Name=EIE29598.1;Note=COG0526 Thiol-disulfide isomerase and thioredoxins;gbkey=CDS;locus_tag=HP17_08621;product=thioredoxin;protein_id=EIE29598.1;transl_table=11 AIHX01000072.1 Genbank gene 14106 14450 . - . ID=gene-HP17_08626;Name=HP17_08626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08626 AIHX01000072.1 Genbank CDS 14106 14450 . - 0 ID=cds-EIE29599.1;Parent=gene-HP17_08626;Dbxref=NCBI_GP:EIE29599.1;Name=EIE29599.1;Note=COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase;gbkey=CDS;locus_tag=HP17_08626;product=Hypothetical protein;protein_id=EIE29599.1;transl_table=11 AIHX01000072.1 Genbank gene 14451 15716 . - . ID=gene-HP17_08631;Name=HP17_08631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08631 AIHX01000072.1 Genbank CDS 14451 15716 . - 0 ID=cds-EIE29600.1;Parent=gene-HP17_08631;Dbxref=NCBI_GP:EIE29600.1;Name=EIE29600.1;Note=COG0460 Homoserine dehydrogenase;gbkey=CDS;locus_tag=HP17_08631;product=homoserine dehydrogenase;protein_id=EIE29600.1;transl_table=11 AIHX01000072.1 Genbank gene 15727 17511 . - . ID=gene-HP17_08636;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HP17_08636 AIHX01000072.1 Genbank CDS 15727 17511 . - 0 ID=cds-EIE29601.1;Parent=gene-HP17_08636;Dbxref=NCBI_GP:EIE29601.1;Name=EIE29601.1;Note=COG0322 Nuclease subunit of the excinuclease complex;gbkey=CDS;gene=uvrC;locus_tag=HP17_08636;product=excinuclease ABC subunit C;protein_id=EIE29601.1;transl_table=11 AIHX01000072.1 Genbank gene 17512 17973 . - . ID=gene-HP17_08641;Name=HP17_08641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08641 AIHX01000072.1 Genbank CDS 17512 17973 . - 0 ID=cds-EIE29602.1;Parent=gene-HP17_08641;Dbxref=NCBI_GP:EIE29602.1;Name=EIE29602.1;gbkey=CDS;locus_tag=HP17_08641;product=Hypothetical protein;protein_id=EIE29602.1;transl_table=11 AIHX01000072.1 Genbank gene 17965 18144 . + . ID=gene-HP17_08646;Name=HP17_08646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08646 AIHX01000072.1 Genbank CDS 17965 18144 . + 0 ID=cds-EIE29603.1;Parent=gene-HP17_08646;Dbxref=NCBI_GP:EIE29603.1;Name=EIE29603.1;gbkey=CDS;locus_tag=HP17_08646;product=Hypothetical protein;protein_id=EIE29603.1;transl_table=11 AIHX01000072.1 Genbank gene 18156 18797 . - . ID=gene-HP17_08651;Name=HP17_08651;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08651 AIHX01000072.1 Genbank CDS 18156 18797 . - 0 ID=cds-EIE29604.1;Parent=gene-HP17_08651;Dbxref=NCBI_GP:EIE29604.1;Name=EIE29604.1;Note=COG1125 ABC-type proline/glycine betaine transport systems%2C ATPase components;gbkey=CDS;locus_tag=HP17_08651;product=osmoprotection protein (proV);protein_id=EIE29604.1;transl_table=11 AIHX01000072.1 Genbank gene 18799 20451 . - . ID=gene-HP17_08656;Name=HP17_08656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08656 AIHX01000072.1 Genbank CDS 18799 20451 . - 0 ID=cds-EIE29605.1;Parent=gene-HP17_08656;Dbxref=NCBI_GP:EIE29605.1;Name=EIE29605.1;Note=COG1174 ABC-type proline/glycine betaine transport systems%2C permease component;gbkey=CDS;locus_tag=HP17_08656;product=ABC-type transport system%2C permease;protein_id=EIE29605.1;transl_table=11 AIHX01000072.1 Genbank gene 20531 20977 . - . ID=gene-HP17_08661;Name=HP17_08661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08661 AIHX01000072.1 Genbank CDS 20531 20977 . - 0 ID=cds-EIE29606.1;Parent=gene-HP17_08661;Dbxref=NCBI_GP:EIE29606.1;Name=EIE29606.1;gbkey=CDS;locus_tag=HP17_08661;product=Hypothetical protein;protein_id=EIE29606.1;transl_table=11 AIHX01000072.1 Genbank gene 20974 21747 . - . ID=gene-HP17_08666;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=HP17_08666 AIHX01000072.1 Genbank CDS 20974 21747 . - 0 ID=cds-EIE29607.1;Parent=gene-HP17_08666;Dbxref=NCBI_GP:EIE29607.1;Name=EIE29607.1;Note=COG1360 Flagellar motor protein;gbkey=CDS;gene=motB;locus_tag=HP17_08666;product=flagellar motor protein MotB;protein_id=EIE29607.1;transl_table=11 AIHX01000072.1 Genbank gene 21750 22523 . - . ID=gene-HP17_08671;Name=HP17_08671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08671 AIHX01000072.1 Genbank CDS 21750 22523 . - 0 ID=cds-EIE29608.1;Parent=gene-HP17_08671;Dbxref=NCBI_GP:EIE29608.1;Name=EIE29608.1;Note=COG1291 Flagellar motor component;gbkey=CDS;locus_tag=HP17_08671;product=flagellar motor protein MotA;protein_id=EIE29608.1;transl_table=11 AIHX01000072.1 Genbank gene 22539 23306 . - . ID=gene-HP17_08676;Name=HP17_08676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08676 AIHX01000072.1 Genbank CDS 22539 23306 . - 0 ID=cds-EIE29609.1;Parent=gene-HP17_08676;Dbxref=NCBI_GP:EIE29609.1;Name=EIE29609.1;Note=COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2;gbkey=CDS;locus_tag=HP17_08676;product=thiamin biosynthesis protein (thiF);protein_id=EIE29609.1;transl_table=11 AIHX01000072.1 Genbank gene 23307 23924 . - . ID=gene-HP17_08681;Name=HP17_08681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08681 AIHX01000072.1 Genbank CDS 23307 23924 . - 0 ID=cds-EIE29610.1;Parent=gene-HP17_08681;Dbxref=NCBI_GP:EIE29610.1;Name=EIE29610.1;Note=COG0491 Zn-dependent hydrolases%2C including glyoxylases;gbkey=CDS;locus_tag=HP17_08681;product=hydrolase;protein_id=EIE29610.1;transl_table=11 AIHX01000072.1 Genbank gene 24057 25067 . + . ID=gene-HP17_08686;Name=HP17_08686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08686 AIHX01000072.1 Genbank CDS 24057 25067 . + 0 ID=cds-EIE29611.1;Parent=gene-HP17_08686;Dbxref=NCBI_GP:EIE29611.1;Name=EIE29611.1;Note=COG1565 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_08686;product=Hypothetical protein;protein_id=EIE29611.1;transl_table=11 AIHX01000072.1 Genbank gene 25527 25853 . + . ID=gene-HP17_08691;Name=HP17_08691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08691 AIHX01000072.1 Genbank CDS 25527 25853 . + 0 ID=cds-EIE29612.1;Parent=gene-HP17_08691;Dbxref=NCBI_GP:EIE29612.1;Name=EIE29612.1;gbkey=CDS;locus_tag=HP17_08691;product=Hypothetical protein;protein_id=EIE29612.1;transl_table=11 AIHX01000072.1 Genbank gene 25832 26434 . + . ID=gene-HP17_08696;Name=HP17_08696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08696 AIHX01000072.1 Genbank CDS 25832 26434 . + 0 ID=cds-EIE29613.1;Parent=gene-HP17_08696;Dbxref=NCBI_GP:EIE29613.1;Name=EIE29613.1;Note=COG0742 N6-adenine-specific methylase;gbkey=CDS;locus_tag=HP17_08696;product=Hypothetical protein;protein_id=EIE29613.1;transl_table=11 AIHX01000072.1 Genbank gene 26443 26994 . + . ID=gene-HP17_08701;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=HP17_08701 AIHX01000072.1 Genbank CDS 26443 26994 . + 0 ID=cds-EIE29614.1;Parent=gene-HP17_08701;Dbxref=NCBI_GP:EIE29614.1;Name=EIE29614.1;Note=COG1580 Flagellar basal body-associated protein;gbkey=CDS;gene=fliL;locus_tag=HP17_08701;product=flagellar basal body-associated protein FliL;protein_id=EIE29614.1;transl_table=11 AIHX01000072.1 Genbank gene 27001 27360 . + . ID=gene-HP17_08706;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=HP17_08706 AIHX01000072.1 Genbank CDS 27001 27360 . + 0 ID=cds-EIE29615.1;Parent=gene-HP17_08706;Dbxref=NCBI_GP:EIE29615.1;Name=EIE29615.1;Note=COG0736 Phosphopantetheinyl transferase (holo-ACP synthase);gbkey=CDS;gene=acpS;locus_tag=HP17_08706;product=4'-phosphopantetheinyl transferase;protein_id=EIE29615.1;transl_table=11 AIHX01000072.1 Genbank gene 27559 29934 . + . ID=gene-HP17_08711;Name=HP17_08711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08711 AIHX01000072.1 Genbank CDS 27559 29934 . + 0 ID=cds-EIE29616.1;Parent=gene-HP17_08711;Dbxref=NCBI_GP:EIE29616.1;Name=EIE29616.1;Note=COG4772 Outer membrane receptor for Fe3+-dicitrate;gbkey=CDS;locus_tag=HP17_08711;product=iron (III) dicitrate transport protein;protein_id=EIE29616.1;transl_table=11 AIHX01000072.1 Genbank gene 29945 30565 . - . ID=gene-HP17_08716;Name=HP17_08716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08716 AIHX01000072.1 Genbank CDS 29945 30565 . - 0 ID=cds-EIE29617.1;Parent=gene-HP17_08716;Dbxref=NCBI_GP:EIE29617.1;Name=EIE29617.1;Note=COG1451 Predicted metal-dependent hydrolase;gbkey=CDS;locus_tag=HP17_08716;product=hydrolase;protein_id=EIE29617.1;transl_table=11 AIHX01000072.1 Genbank gene 30647 30962 . + . ID=gene-HP17_08721;Name=HP17_08721;end_range=30962,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08721;partial=true AIHX01000072.1 Genbank CDS 30647 30962 . + 0 ID=cds-EIE29618.1;Parent=gene-HP17_08721;Dbxref=NCBI_GP:EIE29618.1;Name=EIE29618.1;end_range=30962,.;gbkey=CDS;locus_tag=HP17_08721;partial=true;product=lipooligosaccharide 5G8 epitope biosynthesis-associated protein;protein_id=EIE29618.1;transl_table=11 ##sequence-region AIHX01000073.1 1 11365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000073.1 Genbank region 1 11365 . + . ID=AIHX01000073.1:1..11365;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000073.1 Genbank gene 331 1344 . - . ID=gene-HP17_08726;Name=HP17_08726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08726 AIHX01000073.1 Genbank CDS 331 1344 . - 0 ID=cds-EIE29534.1;Parent=gene-HP17_08726;Dbxref=NCBI_GP:EIE29534.1;Name=EIE29534.1;gbkey=CDS;locus_tag=HP17_08726;product=Hypothetical protein;protein_id=EIE29534.1;transl_table=11 AIHX01000073.1 Genbank gene 1354 1806 . - . ID=gene-HP17_08731;Name=HP17_08731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08731 AIHX01000073.1 Genbank CDS 1354 1806 . - 0 ID=cds-EIE29535.1;Parent=gene-HP17_08731;Dbxref=NCBI_GP:EIE29535.1;Name=EIE29535.1;Note=COG1576 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_08731;product=rRNA large subunit methyltransferase;protein_id=EIE29535.1;transl_table=11 AIHX01000073.1 Genbank gene 1820 2689 . - . ID=gene-HP17_08736;Name=HP17_08736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08736 AIHX01000073.1 Genbank CDS 1820 2689 . - 0 ID=cds-EIE29536.1;Parent=gene-HP17_08736;Dbxref=NCBI_GP:EIE29536.1;Name=EIE29536.1;Note=COG0777 Acetyl-CoA carboxylase beta subunit;gbkey=CDS;locus_tag=HP17_08736;product=acetyl-CoA carboxylase subunit beta;protein_id=EIE29536.1;transl_table=11 AIHX01000073.1 Genbank gene 2771 3385 . + . ID=gene-HP17_08741;Name=HP17_08741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08741 AIHX01000073.1 Genbank CDS 2771 3385 . + 0 ID=cds-EIE29537.1;Parent=gene-HP17_08741;Dbxref=NCBI_GP:EIE29537.1;Name=EIE29537.1;Note=COG0540 Aspartate carbamoyltransferase%2C catalytic chain;gbkey=CDS;locus_tag=HP17_08741;product=putative recombination protein RecO;protein_id=EIE29537.1;transl_table=11 AIHX01000073.1 Genbank gene 3396 4052 . + . ID=gene-HP17_08746;Name=HP17_08746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08746 AIHX01000073.1 Genbank CDS 3396 4052 . + 0 ID=cds-EIE29538.1;Parent=gene-HP17_08746;Dbxref=NCBI_GP:EIE29538.1;Name=EIE29538.1;Note=COG1546 Uncharacterized protein (competence- and mitomycin-induced);gbkey=CDS;locus_tag=HP17_08746;product=putative competence/damage-inducible protein CinA;protein_id=EIE29538.1;transl_table=11 AIHX01000073.1 Genbank gene 4055 4621 . - . ID=gene-HP17_08751;Name=HP17_08751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08751 AIHX01000073.1 Genbank CDS 4055 4621 . - 0 ID=cds-EIE29539.1;Parent=gene-HP17_08751;Dbxref=NCBI_GP:EIE29539.1;Name=EIE29539.1;gbkey=CDS;locus_tag=HP17_08751;product=Hypothetical protein;protein_id=EIE29539.1;transl_table=11 AIHX01000073.1 Genbank gene 4687 5319 . - . ID=gene-HP17_08756;Name=HP17_08756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08756 AIHX01000073.1 Genbank CDS 4687 5319 . - 0 ID=cds-EIE29540.1;Parent=gene-HP17_08756;Dbxref=NCBI_GP:EIE29540.1;Name=EIE29540.1;Note=COG0778 Nitroreductase;gbkey=CDS;locus_tag=HP17_08756;product=aldehyde dehydrogenase;protein_id=EIE29540.1;transl_table=11 AIHX01000073.1 Genbank gene 5330 6169 . - . ID=gene-HP17_08761;Name=HP17_08761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08761 AIHX01000073.1 Genbank CDS 5330 6169 . - 0 ID=cds-EIE29541.1;Parent=gene-HP17_08761;Dbxref=NCBI_GP:EIE29541.1;Name=EIE29541.1;Note=COG0682 Prolipoprotein diacylglyceryltransferase;gbkey=CDS;locus_tag=HP17_08761;product=prolipoprotein diacylglyceryl transferase;protein_id=EIE29541.1;transl_table=11 AIHX01000073.1 Genbank gene 6179 6907 . - . ID=gene-HP17_08766;Name=HP17_08766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08766 AIHX01000073.1 Genbank CDS 6179 6907 . - 0 ID=cds-EIE29542.1;Parent=gene-HP17_08766;Dbxref=NCBI_GP:EIE29542.1;Name=EIE29542.1;Note=COG0564 Pseudouridylate synthases%2C 23S RNA-specific;gbkey=CDS;locus_tag=HP17_08766;product=Hypothetical protein;protein_id=EIE29542.1;transl_table=11 AIHX01000073.1 Genbank gene 6919 8100 . - . ID=gene-HP17_08771;Name=HP17_08771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08771 AIHX01000073.1 Genbank CDS 6919 8100 . - 0 ID=cds-EIE29543.1;Parent=gene-HP17_08771;Dbxref=NCBI_GP:EIE29543.1;Name=EIE29543.1;Note=COG1519 3-deoxy-D-manno-octulosonic-acid transferase;gbkey=CDS;locus_tag=HP17_08771;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=EIE29543.1;transl_table=11 AIHX01000073.1 Genbank gene 8101 8865 . - . ID=gene-HP17_08776;Name=HP17_08776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08776 AIHX01000073.1 Genbank CDS 8101 8865 . - 0 ID=cds-EIE29544.1;Parent=gene-HP17_08776;Dbxref=NCBI_GP:EIE29544.1;Name=EIE29544.1;Note=COG1579 Zn-ribbon protein%2C possibly nucleic acid-binding;gbkey=CDS;locus_tag=HP17_08776;product=Hypothetical protein;protein_id=EIE29544.1;transl_table=11 AIHX01000073.1 Genbank gene 8875 9606 . - . ID=gene-HP17_08781;Name=HP17_08781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08781 AIHX01000073.1 Genbank CDS 8875 9606 . - 0 ID=cds-EIE29545.1;Parent=gene-HP17_08781;Dbxref=NCBI_GP:EIE29545.1;Name=EIE29545.1;Note=COG0327 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_08781;product=Hypothetical protein;protein_id=EIE29545.1;transl_table=11 AIHX01000073.1 Genbank gene 9608 10504 . - . ID=gene-HP17_08786;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=HP17_08786 AIHX01000073.1 Genbank CDS 9608 10504 . - 0 ID=cds-EIE29546.1;Parent=gene-HP17_08786;Dbxref=NCBI_GP:EIE29546.1;Name=EIE29546.1;Note=COG0752 Glycyl-tRNA synthetase%2C alpha subunit;gbkey=CDS;gene=glyQ;locus_tag=HP17_08786;product=glycyl-tRNA synthetase subunit alpha;protein_id=EIE29546.1;transl_table=11 AIHX01000073.1 Genbank gene 10518 11365 . - . ID=gene-HP17_08791;Name=gpsA;end_range=11365,.;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=HP17_08791;partial=true AIHX01000073.1 Genbank CDS 10518 11365 . - 2 ID=cds-EIE29547.1;Parent=gene-HP17_08791;Dbxref=NCBI_GP:EIE29547.1;Name=EIE29547.1;Note=COG0240 Glycerol-3-phosphate dehydrogenase;end_range=11365,.;gbkey=CDS;gene=gpsA;locus_tag=HP17_08791;partial=true;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=EIE29547.1;transl_table=11 ##sequence-region AIHX01000074.1 1 1176 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000074.1 Genbank region 1 1176 . + . ID=AIHX01000074.1:1..1176;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000074.1 Genbank gene 1 69 . - . ID=gene-HP17_08796;Name=HP17_08796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08796;partial=true;start_range=.,1 AIHX01000074.1 Genbank CDS 1 69 . - 0 ID=cds-EIE29529.1;Parent=gene-HP17_08796;Dbxref=NCBI_GP:EIE29529.1;Name=EIE29529.1;gbkey=CDS;locus_tag=HP17_08796;partial=true;product=Hypothetical protein;protein_id=EIE29529.1;start_range=.,1;transl_table=11 AIHX01000074.1 Genbank gene 463 1176 . - . ID=gene-HP17_08801;Name=HP17_08801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08801 AIHX01000074.1 Genbank CDS 463 1176 . - 0 ID=cds-EIE29530.1;Parent=gene-HP17_08801;Dbxref=NCBI_GP:EIE29530.1;Name=EIE29530.1;gbkey=CDS;locus_tag=HP17_08801;product=Hypothetical protein;protein_id=EIE29530.1;transl_table=11 ##sequence-region AIHX01000075.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000075.1 Genbank region 1 1118 . + . ID=AIHX01000075.1:1..1118;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000075.1 Genbank gene 5 1108 . - . ID=gene-HP17_08806;Name=HP17_08806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_08806 AIHX01000075.1 Genbank CDS 5 1108 . - 0 ID=cds-EIE29510.1;Parent=gene-HP17_08806;Dbxref=NCBI_GP:EIE29510.1;Name=EIE29510.1;gbkey=CDS;locus_tag=HP17_08806;product=outer membrane protein HopK;protein_id=EIE29510.1;transl_table=11 ##sequence-region AIHX01000076.1 1 16776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000076.1 Genbank region 1 16776 . + . ID=AIHX01000076.1:1..16776;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000076.1 Genbank gene 116 1861 . - . ID=gene-HP17_00875;Name=HP17_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00875 AIHX01000076.1 Genbank CDS 116 1861 . - 0 ID=cds-EIE29496.1;Parent=gene-HP17_00875;Dbxref=NCBI_GP:EIE29496.1;Name=EIE29496.1;Note=COG0737 5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases;gbkey=CDS;locus_tag=HP17_00875;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=EIE29496.1;transl_table=11 AIHX01000076.1 Genbank gene 1999 2466 . - . ID=gene-HP17_00880;Name=HP17_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00880 AIHX01000076.1 Genbank CDS 1999 2466 . - 0 ID=cds-EIE29497.1;Parent=gene-HP17_00880;Dbxref=NCBI_GP:EIE29497.1;Name=EIE29497.1;Note=COG1854 LuxS protein involved in autoinducer AI2 synthesis;gbkey=CDS;locus_tag=HP17_00880;product=S-ribosylhomocysteinase;protein_id=EIE29497.1;transl_table=11 AIHX01000076.1 Genbank gene 2496 3638 . - . ID=gene-HP17_00885;Name=HP17_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00885 AIHX01000076.1 Genbank CDS 2496 3638 . - 0 ID=cds-EIE29498.1;Parent=gene-HP17_00885;Dbxref=NCBI_GP:EIE29498.1;Name=EIE29498.1;Note=COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases;gbkey=CDS;locus_tag=HP17_00885;product=cystathionine gamma-synthase/cystathionine beta-lyase;protein_id=EIE29498.1;transl_table=11 AIHX01000076.1 Genbank gene 3663 4580 . - . ID=gene-HP17_00890;Name=HP17_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00890 AIHX01000076.1 Genbank CDS 3663 4580 . - 0 ID=cds-EIE29499.1;Parent=gene-HP17_00890;Dbxref=NCBI_GP:EIE29499.1;Name=EIE29499.1;Note=COG0031 Cysteine synthase;gbkey=CDS;locus_tag=HP17_00890;product=cysteine synthase B;protein_id=EIE29499.1;transl_table=11 AIHX01000076.1 Genbank gene 4691 4798 . + . ID=gene-HP17_00895;Name=HP17_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00895 AIHX01000076.1 Genbank CDS 4691 4798 . + 0 ID=cds-EIE29500.1;Parent=gene-HP17_00895;Dbxref=NCBI_GP:EIE29500.1;Name=EIE29500.1;gbkey=CDS;locus_tag=HP17_00895;product=Hypothetical protein;protein_id=EIE29500.1;transl_table=11 AIHX01000076.1 Genbank gene 4821 5105 . - . ID=gene-HP17_00900;Name=HP17_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00900 AIHX01000076.1 Genbank CDS 4821 5105 . - 0 ID=cds-EIE29501.1;Parent=gene-HP17_00900;Dbxref=NCBI_GP:EIE29501.1;Name=EIE29501.1;gbkey=CDS;locus_tag=HP17_00900;product=Hypothetical protein;protein_id=EIE29501.1;transl_table=11 AIHX01000076.1 Genbank gene 5350 7212 . - . ID=gene-HP17_00905;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HP17_00905 AIHX01000076.1 Genbank CDS 5350 7212 . - 0 ID=cds-EIE29502.1;Parent=gene-HP17_00905;Dbxref=NCBI_GP:EIE29502.1;Name=EIE29502.1;Note=COG0443 Molecular chaperone;gbkey=CDS;gene=dnaK;locus_tag=HP17_00905;product=molecular chaperone DnaK;protein_id=EIE29502.1;transl_table=11 AIHX01000076.1 Genbank gene 7243 7815 . - . ID=gene-HP17_00910;Name=HP17_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00910 AIHX01000076.1 Genbank CDS 7243 7815 . - 0 ID=cds-EIE29503.1;Parent=gene-HP17_00910;Dbxref=NCBI_GP:EIE29503.1;Name=EIE29503.1;Note=COG0576 Molecular chaperone GrpE (heat shock protein);gbkey=CDS;locus_tag=HP17_00910;product=heat shock protein GrpE;protein_id=EIE29503.1;transl_table=11 AIHX01000076.1 Genbank gene 7815 8642 . - . ID=gene-HP17_00915;Name=HP17_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00915 AIHX01000076.1 Genbank CDS 7815 8642 . - 0 ID=cds-EIE29504.1;Parent=gene-HP17_00915;Dbxref=NCBI_GP:EIE29504.1;Name=EIE29504.1;Note=COG1420 Transcriptional regulator of heat shock gene;gbkey=CDS;locus_tag=HP17_00915;product=heat-inducible transcription repressor;protein_id=EIE29504.1;transl_table=11 AIHX01000076.1 Genbank gene 8853 9491 . + . ID=gene-HP17_00920;Name=HP17_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00920 AIHX01000076.1 Genbank CDS 8853 9491 . + 0 ID=cds-EIE29505.1;Parent=gene-HP17_00920;Dbxref=NCBI_GP:EIE29505.1;Name=EIE29505.1;Note=COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases;gbkey=CDS;locus_tag=HP17_00920;product=Hypothetical protein;protein_id=EIE29505.1;transl_table=11 AIHX01000076.1 Genbank gene 9512 9808 . + . ID=gene-HP17_00925;Name=HP17_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00925 AIHX01000076.1 Genbank CDS 9512 9808 . + 0 ID=cds-EIE29506.1;Parent=gene-HP17_00925;Dbxref=NCBI_GP:EIE29506.1;Name=EIE29506.1;gbkey=CDS;locus_tag=HP17_00925;product=Hypothetical protein;protein_id=EIE29506.1;transl_table=11 AIHX01000076.1 Genbank gene 9817 11700 . - . ID=gene-HP17_00930;Name=HP17_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00930 AIHX01000076.1 Genbank CDS 9817 11700 . - 0 ID=cds-EIE29507.1;Parent=gene-HP17_00930;Dbxref=NCBI_GP:EIE29507.1;Name=EIE29507.1;Note=COG2604 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_00930;product=Hypothetical protein;protein_id=EIE29507.1;transl_table=11 AIHX01000076.1 Genbank gene 11761 13305 . - . ID=gene-HP17_00935;Name=HP17_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00935 AIHX01000076.1 Genbank CDS 11761 13305 . - 0 ID=cds-EIE29508.1;Parent=gene-HP17_00935;Dbxref=NCBI_GP:EIE29508.1;Name=EIE29508.1;Note=COG1344 Flagellin and related hook-associated proteins;gbkey=CDS;locus_tag=HP17_00935;product=flagellin B;protein_id=EIE29508.1;transl_table=11 AIHX01000076.1 Genbank pseudogene 13471 15682 . + . ID=gene-HP17_00940;Name=HP17_00940;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_00940;pseudo=true AIHX01000076.1 Genbank sequence_feature 13471 15682 . + . ID=id-HP17_00940;Note=potential frameshift: common BLAST hit: gi|254778836|ref|YP_003056941.1| DNA topoisomerase I;gbkey=misc_feature;locus_tag=HP17_00940;pseudo=true AIHX01000076.1 Genbank gene 15675 16601 . + . ID=gene-HP17_00950;Name=HP17_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00950 AIHX01000076.1 Genbank CDS 15675 16601 . + 0 ID=cds-EIE29509.1;Parent=gene-HP17_00950;Dbxref=NCBI_GP:EIE29509.1;Name=EIE29509.1;Note=COG0731 Fe-S oxidoreductases;gbkey=CDS;locus_tag=HP17_00950;product=Hypothetical protein;protein_id=EIE29509.1;transl_table=11 ##sequence-region AIHX01000077.1 1 3012 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000077.1 Genbank region 1 3012 . + . ID=AIHX01000077.1:1..3012;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000077.1 Genbank gene 93 299 . - . ID=gene-HP17_00955;Name=HP17_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00955 AIHX01000077.1 Genbank CDS 93 299 . - 0 ID=cds-EIE29488.1;Parent=gene-HP17_00955;Dbxref=NCBI_GP:EIE29488.1;Name=EIE29488.1;Note=COG1942 Uncharacterized protein%2C 4-oxalocrotonate tautomerase homolog;gbkey=CDS;locus_tag=HP17_00955;product=4-oxalocrotonate tautomerase;protein_id=EIE29488.1;transl_table=11 AIHX01000077.1 Genbank gene 440 1021 . + . ID=gene-HP17_00960;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HP17_00960 AIHX01000077.1 Genbank CDS 440 1021 . + 0 ID=cds-EIE29489.1;Parent=gene-HP17_00960;Dbxref=NCBI_GP:EIE29489.1;Name=EIE29489.1;Note=COG0353 Recombinational DNA repair protein (RecF pathway);gbkey=CDS;gene=recR;locus_tag=HP17_00960;product=recombination protein RecR;protein_id=EIE29489.1;transl_table=11 AIHX01000077.1 Genbank gene 1018 2163 . + . ID=gene-HP17_00965;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=HP17_00965 AIHX01000077.1 Genbank CDS 1018 2163 . + 0 ID=cds-EIE29490.1;Parent=gene-HP17_00965;Dbxref=NCBI_GP:EIE29490.1;Name=EIE29490.1;Note=COG0585 Uncharacterized conserved protein;gbkey=CDS;gene=truD;locus_tag=HP17_00965;product=tRNA pseudouridine synthase D;protein_id=EIE29490.1;transl_table=11 AIHX01000077.1 Genbank gene 2150 3012 . + . ID=gene-HP17_00970;Name=HP17_00970;end_range=3012,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00970;partial=true AIHX01000077.1 Genbank CDS 2150 3012 . + 0 ID=cds-EIE29491.1;Parent=gene-HP17_00970;Dbxref=NCBI_GP:EIE29491.1;Name=EIE29491.1;Note=COG0501 Zn-dependent protease with chaperone function;end_range=3012,.;gbkey=CDS;locus_tag=HP17_00970;partial=true;product=heat shock protein HtpX;protein_id=EIE29491.1;transl_table=11 ##sequence-region AIHX01000078.1 1 11960 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000078.1 Genbank region 1 11960 . + . ID=AIHX01000078.1:1..11960;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000078.1 Genbank gene 51 593 . + . ID=gene-HP17_00975;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=HP17_00975 AIHX01000078.1 Genbank CDS 51 593 . + 0 ID=cds-EIE29466.1;Parent=gene-HP17_00975;Dbxref=NCBI_GP:EIE29466.1;Name=EIE29466.1;Note=COG0302 GTP cyclohydrolase I;gbkey=CDS;gene=folE;locus_tag=HP17_00975;product=GTP cyclohydrolase I;protein_id=EIE29466.1;transl_table=11 AIHX01000078.1 Genbank gene 609 1520 . + . ID=gene-HP17_00980;Name=HP17_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00980 AIHX01000078.1 Genbank CDS 609 1520 . + 0 ID=cds-EIE29467.1;Parent=gene-HP17_00980;Dbxref=NCBI_GP:EIE29467.1;Name=EIE29467.1;Note=COG0142 Geranylgeranyl pyrophosphate synthase;gbkey=CDS;locus_tag=HP17_00980;product=Geranyltranstransferase;protein_id=EIE29467.1;transl_table=11 AIHX01000078.1 Genbank gene 1517 2320 . + . ID=gene-HP17_00985;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=HP17_00985 AIHX01000078.1 Genbank CDS 1517 2320 . + 0 ID=cds-EIE29468.1;Parent=gene-HP17_00985;Dbxref=NCBI_GP:EIE29468.1;Name=EIE29468.1;Note=COG0496 Predicted acid phosphatase;gbkey=CDS;gene=surE;locus_tag=HP17_00985;product=5'(3')-nucleotidase/polyphosphatase;protein_id=EIE29468.1;transl_table=11 AIHX01000078.1 Genbank gene 2317 2976 . + . ID=gene-HP17_00990;Name=HP17_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00990 AIHX01000078.1 Genbank CDS 2317 2976 . + 0 ID=cds-EIE29469.1;Parent=gene-HP17_00990;Dbxref=NCBI_GP:EIE29469.1;Name=EIE29469.1;gbkey=CDS;locus_tag=HP17_00990;product=Hypothetical protein;protein_id=EIE29469.1;transl_table=11 AIHX01000078.1 Genbank gene 2980 3582 . + . ID=gene-HP17_00995;Name=HP17_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00995 AIHX01000078.1 Genbank CDS 2980 3582 . + 0 ID=cds-EIE29470.1;Parent=gene-HP17_00995;Dbxref=NCBI_GP:EIE29470.1;Name=EIE29470.1;Note=COG0720 6-pyruvoyl-tetrahydropterin synthase;gbkey=CDS;locus_tag=HP17_00995;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=EIE29470.1;transl_table=11 AIHX01000078.1 Genbank gene 3579 4334 . + . ID=gene-HP17_01000;Name=HP17_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01000 AIHX01000078.1 Genbank CDS 3579 4334 . + 0 ID=cds-EIE29471.1;Parent=gene-HP17_01000;Dbxref=NCBI_GP:EIE29471.1;Name=EIE29471.1;Note=COG0602 Organic radical activating enzymes;gbkey=CDS;locus_tag=HP17_01000;product=Hypothetical protein;protein_id=EIE29471.1;transl_table=11 AIHX01000078.1 Genbank gene 4345 4830 . + . ID=gene-HP17_01005;Name=HP17_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01005 AIHX01000078.1 Genbank CDS 4345 4830 . + 0 ID=cds-EIE29472.1;Parent=gene-HP17_01005;Dbxref=NCBI_GP:EIE29472.1;Name=EIE29472.1;Note=COG0454 Histone acetyltransferase HPA2 and related acetyltransferases;gbkey=CDS;locus_tag=HP17_01005;product=Hypothetical protein;protein_id=EIE29472.1;transl_table=11 AIHX01000078.1 Genbank gene 5029 5163 . + . ID=gene-HP17_01010;Name=HP17_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01010 AIHX01000078.1 Genbank CDS 5029 5163 . + 0 ID=cds-EIE29473.1;Parent=gene-HP17_01010;Dbxref=NCBI_GP:EIE29473.1;Name=EIE29473.1;gbkey=CDS;locus_tag=HP17_01010;product=putative outer membrane protein;protein_id=EIE29473.1;transl_table=11 AIHX01000078.1 Genbank gene 5325 6668 . - . ID=gene-HP17_01015;Name=HP17_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01015 AIHX01000078.1 Genbank CDS 5325 6668 . - 0 ID=cds-EIE29474.1;Parent=gene-HP17_01015;Dbxref=NCBI_GP:EIE29474.1;Name=EIE29474.1;Note=COG0477 Permeases of the major facilitator superfamily;gbkey=CDS;locus_tag=HP17_01015;product=proline and betaine transporter;protein_id=EIE29474.1;transl_table=11 AIHX01000078.1 Genbank gene 6962 8668 . - . ID=gene-HP17_01020;Name=HP17_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01020 AIHX01000078.1 Genbank CDS 6962 8668 . - 0 ID=cds-EIE29475.1;Parent=gene-HP17_01020;Dbxref=NCBI_GP:EIE29475.1;Name=EIE29475.1;Note=COG1479 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_01020;product=Hypothetical protein;protein_id=EIE29475.1;transl_table=11 AIHX01000078.1 Genbank gene 8732 9445 . - . ID=gene-HP17_01025;Name=HP17_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01025 AIHX01000078.1 Genbank CDS 8732 9445 . - 0 ID=cds-EIE29476.1;Parent=gene-HP17_01025;Dbxref=NCBI_GP:EIE29476.1;Name=EIE29476.1;Note=COG0765 ABC-type amino acid transport system%2C permease component;gbkey=CDS;locus_tag=HP17_01025;product=amino acid ABC transporter permease;protein_id=EIE29476.1;transl_table=11 AIHX01000078.1 Genbank gene 9429 10205 . - . ID=gene-HP17_01030;Name=HP17_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01030 AIHX01000078.1 Genbank CDS 9429 10205 . - 0 ID=cds-EIE29477.1;Parent=gene-HP17_01030;Dbxref=NCBI_GP:EIE29477.1;Name=EIE29477.1;Note=COG0834 ABC-type amino acid transport/signal transduction systems%2C periplasmic component/domain;gbkey=CDS;locus_tag=HP17_01030;product=putative polar amino acid transport system substrate-binding protein;protein_id=EIE29477.1;transl_table=11 AIHX01000078.1 Genbank gene 10276 11409 . - . ID=gene-HP17_01035;Name=HP17_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01035 AIHX01000078.1 Genbank CDS 10276 11409 . - 0 ID=cds-EIE29478.1;Parent=gene-HP17_01035;Dbxref=NCBI_GP:EIE29478.1;Name=EIE29478.1;Note=COG0787 Alanine racemase;gbkey=CDS;locus_tag=HP17_01035;product=alanine racemase;protein_id=EIE29478.1;transl_table=11 AIHX01000078.1 Genbank gene 11416 11960 . - . ID=gene-HP17_01040;Name=HP17_01040;end_range=11960,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01040;partial=true AIHX01000078.1 Genbank CDS 11416 11960 . - 2 ID=cds-EIE29479.1;Parent=gene-HP17_01040;Dbxref=NCBI_GP:EIE29479.1;Name=EIE29479.1;Note=COG1115 Na+/alanine symporter;end_range=11960,.;gbkey=CDS;locus_tag=HP17_01040;partial=true;product=D-alanine glycine permease;protein_id=EIE29479.1;transl_table=11 ##sequence-region AIHX01000079.1 1 12479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000079.1 Genbank region 1 12479 . + . ID=AIHX01000079.1:1..12479;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000079.1 Genbank gene 1 1241 . - . ID=gene-HP17_00015;Name=HP17_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00015;partial=true;start_range=.,1 AIHX01000079.1 Genbank CDS 1 1241 . - 0 ID=cds-EIE29451.1;Parent=gene-HP17_00015;Dbxref=NCBI_GP:EIE29451.1;Name=EIE29451.1;Note=COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase;gbkey=CDS;locus_tag=HP17_00015;partial=true;product=phosphoenolpyruvate synthase;protein_id=EIE29451.1;start_range=.,1;transl_table=11 AIHX01000079.1 Genbank gene 1454 1567 . + . ID=gene-HP17_00020;Name=HP17_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00020 AIHX01000079.1 Genbank CDS 1454 1567 . + 0 ID=cds-EIE29452.1;Parent=gene-HP17_00020;Dbxref=NCBI_GP:EIE29452.1;Name=EIE29452.1;gbkey=CDS;locus_tag=HP17_00020;product=Hypothetical protein;protein_id=EIE29452.1;transl_table=11 AIHX01000079.1 Genbank gene 1607 3445 . + . ID=gene-HP17_00025;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=HP17_00025 AIHX01000079.1 Genbank CDS 1607 3445 . + 0 ID=cds-EIE29453.1;Parent=gene-HP17_00025;Dbxref=NCBI_GP:EIE29453.1;Name=EIE29453.1;Note=COG0441 Threonyl-tRNA synthetase;gbkey=CDS;gene=thrS;locus_tag=HP17_00025;product=threonyl-tRNA synthetase;protein_id=EIE29453.1;transl_table=11 AIHX01000079.1 Genbank gene 3442 4053 . + . ID=gene-HP17_00030;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=HP17_00030 AIHX01000079.1 Genbank CDS 3442 4053 . + 0 ID=cds-EIE29454.1;Parent=gene-HP17_00030;Dbxref=NCBI_GP:EIE29454.1;Name=EIE29454.1;Note=COG0290 Translation initiation factor 3 (IF-3);gbkey=CDS;gene=infC;locus_tag=HP17_00030;product=translation initiation factor IF-3;protein_id=EIE29454.1;transl_table=11 AIHX01000079.1 Genbank gene 4034 4228 . + . ID=gene-HP17_00035;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=HP17_00035 AIHX01000079.1 Genbank CDS 4034 4228 . + 0 ID=cds-EIE29455.1;Parent=gene-HP17_00035;Dbxref=NCBI_GP:EIE29455.1;Name=EIE29455.1;Note=COG0291 Ribosomal protein L35;gbkey=CDS;gene=rpmI;locus_tag=HP17_00035;product=50S ribosomal protein L35;protein_id=EIE29455.1;transl_table=11 AIHX01000079.1 Genbank gene 4323 4673 . + . ID=gene-HP17_00040;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HP17_00040 AIHX01000079.1 Genbank CDS 4323 4673 . + 0 ID=cds-EIE29456.1;Parent=gene-HP17_00040;Dbxref=NCBI_GP:EIE29456.1;Name=EIE29456.1;Note=COG0292 Ribosomal protein L20;gbkey=CDS;gene=rplT;locus_tag=HP17_00040;product=50S ribosomal protein L20;protein_id=EIE29456.1;transl_table=11 AIHX01000079.1 Genbank gene 4872 5732 . + . ID=gene-HP17_00045;Name=HP17_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00045 AIHX01000079.1 Genbank CDS 4872 5732 . + 0 ID=cds-EIE29457.1;Parent=gene-HP17_00045;Dbxref=NCBI_GP:EIE29457.1;Name=EIE29457.1;gbkey=CDS;locus_tag=HP17_00045;product=outer membrane protein;protein_id=EIE29457.1;transl_table=11 AIHX01000079.1 Genbank gene 5784 5957 . + . ID=gene-HP17_00050;Name=HP17_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00050 AIHX01000079.1 Genbank CDS 5784 5957 . + 0 ID=cds-EIE29458.1;Parent=gene-HP17_00050;Dbxref=NCBI_GP:EIE29458.1;Name=EIE29458.1;gbkey=CDS;locus_tag=HP17_00050;product=Hypothetical protein;protein_id=EIE29458.1;transl_table=11 AIHX01000079.1 Genbank gene 6080 6511 . + . ID=gene-HP17_00055;Name=HP17_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00055 AIHX01000079.1 Genbank CDS 6080 6511 . + 0 ID=cds-EIE29459.1;Parent=gene-HP17_00055;Dbxref=NCBI_GP:EIE29459.1;Name=EIE29459.1;gbkey=CDS;locus_tag=HP17_00055;product=Hypothetical protein;protein_id=EIE29459.1;transl_table=11 AIHX01000079.1 Genbank gene 6921 7781 . + . ID=gene-HP17_00060;Name=HP17_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00060 AIHX01000079.1 Genbank CDS 6921 7781 . + 0 ID=cds-EIE29460.1;Parent=gene-HP17_00060;Dbxref=NCBI_GP:EIE29460.1;Name=EIE29460.1;gbkey=CDS;locus_tag=HP17_00060;product=Hypothetical protein;protein_id=EIE29460.1;transl_table=11 AIHX01000079.1 Genbank gene 8333 8437 . - . ID=gene-HP17_00065;Name=HP17_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00065 AIHX01000079.1 Genbank CDS 8333 8437 . - 0 ID=cds-EIE29461.1;Parent=gene-HP17_00065;Dbxref=NCBI_GP:EIE29461.1;Name=EIE29461.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_00065;product=Hypothetical protein;protein_id=EIE29461.1;transl_table=11 AIHX01000079.1 Genbank gene 8431 9798 . - . ID=gene-HP17_00070;Name=HP17_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00070 AIHX01000079.1 Genbank CDS 8431 9798 . - 0 ID=cds-EIE29462.1;Parent=gene-HP17_00070;Dbxref=NCBI_GP:EIE29462.1;Name=EIE29462.1;Note=COG1760 L-serine deaminase;gbkey=CDS;locus_tag=HP17_00070;product=L-serine deaminase;protein_id=EIE29462.1;transl_table=11 AIHX01000079.1 Genbank gene 9798 11039 . - . ID=gene-HP17_00075;Name=HP17_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00075 AIHX01000079.1 Genbank CDS 9798 11039 . - 0 ID=cds-EIE29463.1;Parent=gene-HP17_00075;Dbxref=NCBI_GP:EIE29463.1;Name=EIE29463.1;Note=COG0814 Amino acid permeases;gbkey=CDS;locus_tag=HP17_00075;product=L-serine transporter;protein_id=EIE29463.1;transl_table=11 AIHX01000079.1 Genbank gene 11221 12479 . + . ID=gene-HP17_00080;Name=HP17_00080;end_range=12479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00080;partial=true AIHX01000079.1 Genbank CDS 11221 12479 . + 0 ID=cds-EIE29464.1;Parent=gene-HP17_00080;Dbxref=NCBI_GP:EIE29464.1;Name=EIE29464.1;Note=COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase;end_range=12479,.;gbkey=CDS;locus_tag=HP17_00080;partial=true;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=EIE29464.1;transl_table=11 ##sequence-region AIHX01000080.1 1 4715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000080.1 Genbank region 1 4715 . + . ID=AIHX01000080.1:1..4715;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000080.1 Genbank gene 1 798 . - . ID=gene-HP17_01045;Name=HP17_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01045;partial=true;start_range=.,1 AIHX01000080.1 Genbank CDS 1 798 . - 0 ID=cds-EIE29443.1;Parent=gene-HP17_01045;Dbxref=NCBI_GP:EIE29443.1;Name=EIE29443.1;Note=COG1115 Na+/alanine symporter;gbkey=CDS;locus_tag=HP17_01045;partial=true;product=D-alanine glycine permease;protein_id=EIE29443.1;start_range=.,1;transl_table=11 AIHX01000080.1 Genbank gene 839 2071 . - . ID=gene-HP17_01050;Name=HP17_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01050 AIHX01000080.1 Genbank CDS 839 2071 . - 0 ID=cds-EIE29444.1;Parent=gene-HP17_01050;Dbxref=NCBI_GP:EIE29444.1;Name=EIE29444.1;Note=COG0665 Glycine/D-amino acid oxidases (deaminating);gbkey=CDS;locus_tag=HP17_01050;product=D-amino acid dehydrogenase;protein_id=EIE29444.1;transl_table=11 AIHX01000080.1 Genbank gene 2094 2471 . - . ID=gene-HP17_01055;Name=HP17_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01055 AIHX01000080.1 Genbank CDS 2094 2471 . - 0 ID=cds-EIE29445.1;Parent=gene-HP17_01055;Dbxref=NCBI_GP:EIE29445.1;Name=EIE29445.1;Note=COG0251 Putative translation initiation inhibitor%2C yjgF family;gbkey=CDS;locus_tag=HP17_01055;product=Hypothetical protein;protein_id=EIE29445.1;transl_table=11 AIHX01000080.1 Genbank sequence_feature 2650 2862 . - . ID=id-AIHX01000080.1:2650..2862;Note=potential protein location (Hypothetical protein HP17_01060 [Helicobacter pylori 17874]) that overlaps RNA (tRNA-G);gbkey=misc_feature AIHX01000080.1 Genbank gene 2787 2861 . + . ID=gene-HP17_t01072;Name=HP17_t01072;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t01072 AIHX01000080.1 Genbank tRNA 2787 2861 . + . ID=rna-HP17_t01072;Parent=gene-HP17_t01072;gbkey=tRNA;locus_tag=HP17_t01072;product=tRNA-Gly AIHX01000080.1 Genbank exon 2787 2861 . + . ID=exon-HP17_t01072-1;Parent=rna-HP17_t01072;gbkey=tRNA;locus_tag=HP17_t01072;product=tRNA-Gly AIHX01000080.1 Genbank gene 2903 2989 . + . ID=gene-HP17_t01074;Name=HP17_t01074;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t01074 AIHX01000080.1 Genbank tRNA 2903 2989 . + . ID=rna-HP17_t01074;Parent=gene-HP17_t01074;gbkey=tRNA;locus_tag=HP17_t01074;product=tRNA-Leu AIHX01000080.1 Genbank exon 2903 2989 . + . ID=exon-HP17_t01074-1;Parent=rna-HP17_t01074;gbkey=tRNA;locus_tag=HP17_t01074;product=tRNA-Leu AIHX01000080.1 Genbank gene 3063 3137 . + . ID=gene-HP17_t01076;Name=HP17_t01076;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t01076 AIHX01000080.1 Genbank tRNA 3063 3137 . + . ID=rna-HP17_t01076;Parent=gene-HP17_t01076;gbkey=tRNA;locus_tag=HP17_t01076;product=tRNA-Cys AIHX01000080.1 Genbank exon 3063 3137 . + . ID=exon-HP17_t01076-1;Parent=rna-HP17_t01076;gbkey=tRNA;locus_tag=HP17_t01076;product=tRNA-Cys AIHX01000080.1 Genbank gene 3185 3272 . + . ID=gene-HP17_t01078;Name=HP17_t01078;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t01078 AIHX01000080.1 Genbank tRNA 3185 3272 . + . ID=rna-HP17_t01078;Parent=gene-HP17_t01078;gbkey=tRNA;locus_tag=HP17_t01078;product=tRNA-Ser AIHX01000080.1 Genbank exon 3185 3272 . + . ID=exon-HP17_t01078-1;Parent=rna-HP17_t01078;gbkey=tRNA;locus_tag=HP17_t01078;product=tRNA-Ser AIHX01000080.1 Genbank gene 3446 4715 . + . ID=gene-HP17_01065;Name=HP17_01065;end_range=4715,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01065;partial=true AIHX01000080.1 Genbank CDS 3446 4715 . + 0 ID=cds-EIE29446.1;Parent=gene-HP17_01065;Dbxref=NCBI_GP:EIE29446.1;Name=EIE29446.1;Note=COG1757 Na+/H+ antiporter;end_range=4715,.;gbkey=CDS;locus_tag=HP17_01065;partial=true;product=integral membrane protein;protein_id=EIE29446.1;transl_table=11 ##sequence-region AIHX01000081.1 1 22977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000081.1 Genbank region 1 22977 . + . ID=AIHX01000081.1:1..22977;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000081.1 Genbank gene 1 158 . + . ID=gene-HP17_01078;Name=HP17_01078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01078;partial=true;start_range=.,1 AIHX01000081.1 Genbank CDS 1 158 . + 2 ID=cds-EIE29413.1;Parent=gene-HP17_01078;Dbxref=NCBI_GP:EIE29413.1;Name=EIE29413.1;gbkey=CDS;locus_tag=HP17_01078;partial=true;product=integral membrane protein;protein_id=EIE29413.1;start_range=.,1;transl_table=11 AIHX01000081.1 Genbank gene 475 837 . + . ID=gene-HP17_01083;Name=HP17_01083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01083 AIHX01000081.1 Genbank CDS 475 837 . + 0 ID=cds-EIE29414.1;Parent=gene-HP17_01083;Dbxref=NCBI_GP:EIE29414.1;Name=EIE29414.1;gbkey=CDS;locus_tag=HP17_01083;product=Hypothetical protein;protein_id=EIE29414.1;transl_table=11 AIHX01000081.1 Genbank gene 898 2565 . - . ID=gene-HP17_01088;Name=HP17_01088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01088 AIHX01000081.1 Genbank CDS 898 2565 . - 0 ID=cds-EIE29415.1;Parent=gene-HP17_01088;Dbxref=NCBI_GP:EIE29415.1;Name=EIE29415.1;Note=COG0699 Predicted GTPases (dynamin-related);gbkey=CDS;locus_tag=HP17_01088;product=Hypothetical protein;protein_id=EIE29415.1;transl_table=11 AIHX01000081.1 Genbank gene 2877 3110 . + . ID=gene-HP17_01098;Name=HP17_01098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01098 AIHX01000081.1 Genbank CDS 2877 3110 . + 0 ID=cds-EIE29416.1;Parent=gene-HP17_01098;Dbxref=NCBI_GP:EIE29416.1;Name=EIE29416.1;gbkey=CDS;locus_tag=HP17_01098;product=Hypothetical protein;protein_id=EIE29416.1;transl_table=11 AIHX01000081.1 Genbank gene 4686 4967 . - . ID=gene-HP17_01113;Name=HP17_01113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01113 AIHX01000081.1 Genbank CDS 4686 4967 . - 0 ID=cds-EIE29417.1;Parent=gene-HP17_01113;Dbxref=NCBI_GP:EIE29417.1;Name=EIE29417.1;gbkey=CDS;locus_tag=HP17_01113;product=Hypothetical protein;protein_id=EIE29417.1;transl_table=11 AIHX01000081.1 Genbank gene 4978 8037 . - . ID=gene-HP17_01118;Name=HP17_01118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01118 AIHX01000081.1 Genbank CDS 4978 8037 . - 0 ID=cds-EIE29418.1;Parent=gene-HP17_01118;Dbxref=NCBI_GP:EIE29418.1;Name=EIE29418.1;Note=COG3696 Putative silver efflux pump;gbkey=CDS;locus_tag=HP17_01118;product=cobalt-zinc-cadmium resistance protein;protein_id=EIE29418.1;transl_table=11 AIHX01000081.1 Genbank gene 8037 9116 . - . ID=gene-HP17_01123;Name=HP17_01123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01123 AIHX01000081.1 Genbank CDS 8037 9116 . - 0 ID=cds-EIE29419.1;Parent=gene-HP17_01123;Dbxref=NCBI_GP:EIE29419.1;Name=EIE29419.1;Note=COG0845 Membrane-fusion protein;gbkey=CDS;locus_tag=HP17_01123;product=cobalt-zinc-cadmium resistance protein%2C CzcB family;protein_id=EIE29419.1;transl_table=11 AIHX01000081.1 Genbank gene 9113 10408 . - . ID=gene-HP17_01128;Name=HP17_01128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01128 AIHX01000081.1 Genbank CDS 9113 10408 . - 0 ID=cds-EIE29420.1;Parent=gene-HP17_01128;Dbxref=NCBI_GP:EIE29420.1;Name=EIE29420.1;gbkey=CDS;locus_tag=HP17_01128;product=nickel cobalt outer membrane efflux protein;protein_id=EIE29420.1;transl_table=11 AIHX01000081.1 Genbank gene 10398 12503 . - . ID=gene-HP17_01133;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=HP17_01133 AIHX01000081.1 Genbank CDS 10398 12503 . - 0 ID=cds-EIE29421.1;Parent=gene-HP17_01133;Dbxref=NCBI_GP:EIE29421.1;Name=EIE29421.1;Note=COG0751 Glycyl-tRNA synthetase%2C beta subunit;gbkey=CDS;gene=glyS;locus_tag=HP17_01133;product=glycyl-tRNA synthetase subunit beta;protein_id=EIE29421.1;transl_table=11 AIHX01000081.1 Genbank gene 12616 13692 . + . ID=gene-HP17_01138;Name=HP17_01138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01138 AIHX01000081.1 Genbank CDS 12616 13692 . + 0 ID=cds-EIE29422.1;Parent=gene-HP17_01138;Dbxref=NCBI_GP:EIE29422.1;Name=EIE29422.1;gbkey=CDS;locus_tag=HP17_01138;product=Hypothetical protein;protein_id=EIE29422.1;transl_table=11 AIHX01000081.1 Genbank gene 13705 15180 . + . ID=gene-HP17_01143;Name=HP17_01143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01143 AIHX01000081.1 Genbank CDS 13705 15180 . + 0 ID=cds-EIE29423.1;Parent=gene-HP17_01143;Dbxref=NCBI_GP:EIE29423.1;Name=EIE29423.1;Note=COG0696 Phosphoglyceromutase;gbkey=CDS;locus_tag=HP17_01143;product=phosphoglyceromutase;protein_id=EIE29423.1;transl_table=11 AIHX01000081.1 Genbank gene 15195 15476 . + . ID=gene-HP17_01148;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=HP17_01148 AIHX01000081.1 Genbank CDS 15195 15476 . + 0 ID=cds-EIE29424.1;Parent=gene-HP17_01148;Dbxref=NCBI_GP:EIE29424.1;Name=EIE29424.1;Note=COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit;gbkey=CDS;gene=gatC;locus_tag=HP17_01148;product=aspartyl/glutamyl-tRNA amidotransferase subunit C;protein_id=EIE29424.1;transl_table=11 AIHX01000081.1 Genbank gene 15573 16892 . - . ID=gene-HP17_01153;Name=HP17_01153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01153 AIHX01000081.1 Genbank CDS 15573 16892 . - 0 ID=cds-EIE29425.1;Parent=gene-HP17_01153;Dbxref=NCBI_GP:EIE29425.1;Name=EIE29425.1;Note=COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase;gbkey=CDS;locus_tag=HP17_01153;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=EIE29425.1;transl_table=11 AIHX01000081.1 Genbank gene 17022 18485 . + . ID=gene-HP17_01158;Name=HP17_01158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01158 AIHX01000081.1 Genbank CDS 17022 18485 . + 0 ID=cds-EIE29426.1;Parent=gene-HP17_01158;Dbxref=NCBI_GP:EIE29426.1;Name=EIE29426.1;Note=COG0760 Parvulin-like peptidyl-prolyl isomerase;gbkey=CDS;locus_tag=HP17_01158;product=peptidyl-prolyl cis-trans isomerase D;protein_id=EIE29426.1;transl_table=11 AIHX01000081.1 Genbank gene 18501 19982 . + . ID=gene-HP17_01163;Name=HP17_01163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01163 AIHX01000081.1 Genbank CDS 18501 19982 . + 0 ID=cds-EIE29427.1;Parent=gene-HP17_01163;Dbxref=NCBI_GP:EIE29427.1;Name=EIE29427.1;Note=COG0849 Actin-like ATPase involved in cell division;gbkey=CDS;locus_tag=HP17_01163;product=cell division protein FtsA;protein_id=EIE29427.1;transl_table=11 AIHX01000081.1 Genbank gene 20113 21270 . + . ID=gene-HP17_01168;Name=HP17_01168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01168 AIHX01000081.1 Genbank CDS 20113 21270 . + 0 ID=cds-EIE29428.1;Parent=gene-HP17_01168;Dbxref=NCBI_GP:EIE29428.1;Name=EIE29428.1;Note=COG0206 Cell division GTPase;gbkey=CDS;locus_tag=HP17_01168;product=cell division protein FtsZ;protein_id=EIE29428.1;transl_table=11 AIHX01000081.1 Genbank gene 21394 21531 . + . ID=gene-HP17_01173;Name=HP17_01173;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01173 AIHX01000081.1 Genbank CDS 21394 21531 . + 0 ID=cds-EIE29429.1;Parent=gene-HP17_01173;Dbxref=NCBI_GP:EIE29429.1;Name=EIE29429.1;gbkey=CDS;locus_tag=HP17_01173;product=Hypothetical protein;protein_id=EIE29429.1;transl_table=11 AIHX01000081.1 Genbank gene 21935 22069 . - . ID=gene-HP17_01178;Name=HP17_01178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01178 AIHX01000081.1 Genbank CDS 21935 22069 . - 0 ID=cds-EIE29430.1;Parent=gene-HP17_01178;Dbxref=NCBI_GP:EIE29430.1;Name=EIE29430.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_01178;product=Hypothetical protein;protein_id=EIE29430.1;transl_table=11 AIHX01000081.1 Genbank gene 22131 22355 . - . ID=gene-HP17_01183;Name=HP17_01183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01183 AIHX01000081.1 Genbank CDS 22131 22355 . - 0 ID=cds-EIE29431.1;Parent=gene-HP17_01183;Dbxref=NCBI_GP:EIE29431.1;Name=EIE29431.1;gbkey=CDS;locus_tag=HP17_01183;product=Hypothetical protein;protein_id=EIE29431.1;transl_table=11 AIHX01000081.1 Genbank gene 22432 22728 . + . ID=gene-HP17_01188;Name=HP17_01188;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01188 AIHX01000081.1 Genbank CDS 22432 22728 . + 0 ID=cds-EIE29432.1;Parent=gene-HP17_01188;Dbxref=NCBI_GP:EIE29432.1;Name=EIE29432.1;Note=COG0750 Predicted membrane-associated Zn-dependent proteases 1;gbkey=CDS;locus_tag=HP17_01188;product=Hypothetical protein;protein_id=EIE29432.1;transl_table=11 AIHX01000081.1 Genbank gene 22721 22977 . + . ID=gene-HP17_01193;Name=HP17_01193;end_range=22977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01193;partial=true AIHX01000081.1 Genbank CDS 22721 22977 . + 0 ID=cds-EIE29433.1;Parent=gene-HP17_01193;Dbxref=NCBI_GP:EIE29433.1;Name=EIE29433.1;Note=COG1570 Exonuclease VII%2C large subunit;end_range=22977,.;gbkey=CDS;locus_tag=HP17_01193;partial=true;product=exonuclease VII-like protein (xseA);protein_id=EIE29433.1;transl_table=11 ##sequence-region AIHX01000082.1 1 696 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000082.1 Genbank region 1 696 . + . ID=AIHX01000082.1:1..696;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000082.1 Genbank gene 1 136 . - . ID=gene-HP17_01198;Name=HP17_01198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01198;partial=true;start_range=.,1 AIHX01000082.1 Genbank CDS 1 136 . - 0 ID=cds-EIE29391.1;Parent=gene-HP17_01198;Dbxref=NCBI_GP:EIE29391.1;Name=EIE29391.1;Note=COG0675 Transposase and inactivated derivatives;gbkey=CDS;locus_tag=HP17_01198;partial=true;product=IS605 transposase (tnpB);protein_id=EIE29391.1;start_range=.,1;transl_table=11 AIHX01000082.1 Genbank gene 206 634 . + . ID=gene-HP17_01203;Name=HP17_01203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01203 AIHX01000082.1 Genbank CDS 206 634 . + 0 ID=cds-EIE29392.1;Parent=gene-HP17_01203;Dbxref=NCBI_GP:EIE29392.1;Name=EIE29392.1;Note=COG1943 Transposase and inactivated derivatives;gbkey=CDS;locus_tag=HP17_01203;product=transposase A;protein_id=EIE29392.1;transl_table=11 ##sequence-region AIHX01000083.1 1 909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000083.1 Genbank region 1 909 . + . ID=AIHX01000083.1:1..909;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000083.1 Genbank gene 1 103 . - . ID=gene-HP17_01208;Name=HP17_01208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01208;partial=true;start_range=.,1 AIHX01000083.1 Genbank CDS 1 103 . - 0 ID=cds-EIE29388.1;Parent=gene-HP17_01208;Dbxref=NCBI_GP:EIE29388.1;Name=EIE29388.1;gbkey=CDS;locus_tag=HP17_01208;partial=true;product=Hypothetical protein;protein_id=EIE29388.1;start_range=.,1;transl_table=11 AIHX01000083.1 Genbank gene 166 423 . - . ID=gene-HP17_01213;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=HP17_01213 AIHX01000083.1 Genbank CDS 166 423 . - 0 ID=cds-EIE29389.1;Parent=gene-HP17_01213;Dbxref=NCBI_GP:EIE29389.1;Name=EIE29389.1;Note=COG0238 Ribosomal protein S18;gbkey=CDS;gene=rpsR;locus_tag=HP17_01213;product=30S ribosomal protein S18;protein_id=EIE29389.1;transl_table=11 AIHX01000083.1 Genbank gene 446 909 . - . ID=gene-HP17_01218;Name=HP17_01218;end_range=909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01218;partial=true AIHX01000083.1 Genbank CDS 446 909 . - 2 ID=cds-EIE29390.1;Parent=gene-HP17_01218;Dbxref=NCBI_GP:EIE29390.1;Name=EIE29390.1;Note=COG0629 Single-stranded DNA-binding protein;end_range=909,.;gbkey=CDS;locus_tag=HP17_01218;partial=true;product=single-stranded DNA-binding protein;protein_id=EIE29390.1;transl_table=11 ##sequence-region AIHX01000084.1 1 62521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000084.1 Genbank region 1 62521 . + . ID=AIHX01000084.1:1..62521;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000084.1 Genbank gene 1 51 . - . ID=gene-HP17_01223;Name=HP17_01223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01223;partial=true;start_range=.,1 AIHX01000084.1 Genbank CDS 1 51 . - 0 ID=cds-EIE29299.1;Parent=gene-HP17_01223;Dbxref=NCBI_GP:EIE29299.1;Name=EIE29299.1;gbkey=CDS;locus_tag=HP17_01223;partial=true;product=Hypothetical protein;protein_id=EIE29299.1;start_range=.,1;transl_table=11 AIHX01000084.1 Genbank gene 61 489 . - . ID=gene-HP17_01228;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HP17_01228 AIHX01000084.1 Genbank CDS 61 489 . - 0 ID=cds-EIE29300.1;Parent=gene-HP17_01228;Dbxref=NCBI_GP:EIE29300.1;Name=EIE29300.1;Note=COG0360 Ribosomal protein S6;gbkey=CDS;gene=rpsF;locus_tag=HP17_01228;product=30S ribosomal protein S6;protein_id=EIE29300.1;transl_table=11 AIHX01000084.1 Genbank gene 486 617 . - . ID=gene-HP17_01233;Name=HP17_01233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01233 AIHX01000084.1 Genbank CDS 486 617 . - 0 ID=cds-EIE29301.1;Parent=gene-HP17_01233;Dbxref=NCBI_GP:EIE29301.1;Name=EIE29301.1;gbkey=CDS;locus_tag=HP17_01233;product=Hypothetical protein;protein_id=EIE29301.1;transl_table=11 AIHX01000084.1 Genbank gene 642 1664 . - . ID=gene-HP17_01238;Name=HP17_01238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01238 AIHX01000084.1 Genbank CDS 642 1664 . - 0 ID=cds-EIE29302.1;Parent=gene-HP17_01238;Dbxref=NCBI_GP:EIE29302.1;Name=EIE29302.1;gbkey=CDS;locus_tag=HP17_01238;product=DNA polymerase III subunit delta;protein_id=EIE29302.1;transl_table=11 AIHX01000084.1 Genbank gene 1654 3588 . - . ID=gene-HP17_01243;Name=HP17_01243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01243 AIHX01000084.1 Genbank CDS 1654 3588 . - 0 ID=cds-EIE29303.1;Parent=gene-HP17_01243;Dbxref=NCBI_GP:EIE29303.1;Name=EIE29303.1;Note=COG0557 Exoribonuclease R;gbkey=CDS;locus_tag=HP17_01243;product=ribonuclease R;protein_id=EIE29303.1;transl_table=11 AIHX01000084.1 Genbank gene 3588 4379 . - . ID=gene-HP17_01248;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=HP17_01248 AIHX01000084.1 Genbank CDS 3588 4379 . - 0 ID=cds-EIE29304.1;Parent=gene-HP17_01248;Dbxref=NCBI_GP:EIE29304.1;Name=EIE29304.1;Note=COG0169 Shikimate 5-dehydrogenase;gbkey=CDS;gene=aroE;locus_tag=HP17_01248;product=shikimate 5-dehydrogenase;protein_id=EIE29304.1;transl_table=11 AIHX01000084.1 Genbank gene 4387 4965 . - . ID=gene-HP17_01253;Name=HP17_01253;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01253 AIHX01000084.1 Genbank CDS 4387 4965 . - 0 ID=cds-EIE29305.1;Parent=gene-HP17_01253;Dbxref=NCBI_GP:EIE29305.1;Name=EIE29305.1;gbkey=CDS;locus_tag=HP17_01253;product=Hypothetical protein;protein_id=EIE29305.1;transl_table=11 AIHX01000084.1 Genbank gene 4986 6032 . - . ID=gene-HP17_01258;Name=HP17_01258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01258 AIHX01000084.1 Genbank CDS 4986 6032 . - 0 ID=cds-EIE29306.1;Parent=gene-HP17_01258;Dbxref=NCBI_GP:EIE29306.1;Name=EIE29306.1;Note=COG4174 ABC-type uncharacterized transport system%2C permease component;gbkey=CDS;locus_tag=HP17_01258;product=oligopeptide ABC transporter%2C permease protein;protein_id=EIE29306.1;transl_table=11 AIHX01000084.1 Genbank gene 6029 7810 . - . ID=gene-HP17_01263;Name=HP17_01263;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01263 AIHX01000084.1 Genbank CDS 6029 7810 . - 0 ID=cds-EIE29307.1;Parent=gene-HP17_01263;Dbxref=NCBI_GP:EIE29307.1;Name=EIE29307.1;Note=COG4166 ABC-type oligopeptide transport system%2C periplasmic component;gbkey=CDS;locus_tag=HP17_01263;product=ABC transporter substrate-binding protein;protein_id=EIE29307.1;transl_table=11 AIHX01000084.1 Genbank gene 7811 8791 . - . ID=gene-HP17_01268;Name=HP17_01268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01268 AIHX01000084.1 Genbank CDS 7811 8791 . - 0 ID=cds-EIE29308.1;Parent=gene-HP17_01268;Dbxref=NCBI_GP:EIE29308.1;Name=EIE29308.1;Note=COG0180 Tryptophanyl-tRNA synthetase;gbkey=CDS;locus_tag=HP17_01268;product=tryptophanyl-tRNA synthetase;protein_id=EIE29308.1;transl_table=11 AIHX01000084.1 Genbank gene 8862 9599 . - . ID=gene-HP17_01273;Name=HP17_01273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01273 AIHX01000084.1 Genbank CDS 8862 9599 . - 0 ID=cds-EIE29309.1;Parent=gene-HP17_01273;Dbxref=NCBI_GP:EIE29309.1;Name=EIE29309.1;Note=COG0500 SAM-dependent methyltransferases;gbkey=CDS;locus_tag=HP17_01273;product=Biotin biosynthesis protein BioC;protein_id=EIE29309.1;transl_table=11 AIHX01000084.1 Genbank gene 9723 10322 . + . ID=gene-HP17_01278;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=HP17_01278 AIHX01000084.1 Genbank CDS 9723 10322 . + 0 ID=cds-EIE29310.1;Parent=gene-HP17_01278;Dbxref=NCBI_GP:EIE29310.1;Name=EIE29310.1;Note=COG1314 Preprotein translocase subunit SecG;gbkey=CDS;gene=secG;locus_tag=HP17_01278;product=preprotein translocase subunit SecG;protein_id=EIE29310.1;transl_table=11 AIHX01000084.1 Genbank gene 10322 10879 . + . ID=gene-HP17_01283;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=HP17_01283 AIHX01000084.1 Genbank CDS 10322 10879 . + 0 ID=cds-EIE29311.1;Parent=gene-HP17_01283;Dbxref=NCBI_GP:EIE29311.1;Name=EIE29311.1;Note=COG0233 Ribosome recycling factor;gbkey=CDS;gene=frr;locus_tag=HP17_01283;product=ribosome recycling factor;protein_id=EIE29311.1;transl_table=11 AIHX01000084.1 Genbank gene 10883 11488 . + . ID=gene-HP17_01288;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HP17_01288 AIHX01000084.1 Genbank CDS 10883 11488 . + 0 ID=cds-EIE29312.1;Parent=gene-HP17_01288;Dbxref=NCBI_GP:EIE29312.1;Name=EIE29312.1;Note=COG0461 Orotate phosphoribosyltransferase;gbkey=CDS;gene=pyrE;locus_tag=HP17_01288;product=orotate phosphoribosyltransferase;protein_id=EIE29312.1;transl_table=11 AIHX01000084.1 Genbank gene 11478 11942 . + . ID=gene-HP17_01293;Name=HP17_01293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01293 AIHX01000084.1 Genbank CDS 11478 11942 . + 0 ID=cds-EIE29313.1;Parent=gene-HP17_01293;Dbxref=NCBI_GP:EIE29313.1;Name=EIE29313.1;Note=COG1714 Predicted membrane protein/domain;gbkey=CDS;locus_tag=HP17_01293;product=putative membrane protein;protein_id=EIE29313.1;transl_table=11 AIHX01000084.1 Genbank gene 11939 12628 . + . ID=gene-HP17_01298;Name=HP17_01298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01298 AIHX01000084.1 Genbank CDS 11939 12628 . + 0 ID=cds-EIE29314.1;Parent=gene-HP17_01298;Dbxref=NCBI_GP:EIE29314.1;Name=EIE29314.1;Note=COG0846 NAD-dependent protein deacetylases%2C SIR2 family;gbkey=CDS;locus_tag=HP17_01298;product=NAD-dependent deacetylase;protein_id=EIE29314.1;transl_table=11 AIHX01000084.1 Genbank gene 12730 13131 . + . ID=gene-HP17_01303;Name=HP17_01303;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01303 AIHX01000084.1 Genbank CDS 12730 13131 . + 0 ID=cds-EIE29315.1;Parent=gene-HP17_01303;Dbxref=NCBI_GP:EIE29315.1;Name=EIE29315.1;Note=COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A);gbkey=CDS;locus_tag=HP17_01303;product=NADH dehydrogenase subunit A;protein_id=EIE29315.1;transl_table=11 AIHX01000084.1 Genbank gene 13131 13610 . + . ID=gene-HP17_01308;Name=HP17_01308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01308 AIHX01000084.1 Genbank CDS 13131 13610 . + 0 ID=cds-EIE29316.1;Parent=gene-HP17_01308;Dbxref=NCBI_GP:EIE29316.1;Name=EIE29316.1;Note=COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases;gbkey=CDS;locus_tag=HP17_01308;product=NADH dehydrogenase subunit B;protein_id=EIE29316.1;transl_table=11 AIHX01000084.1 Genbank gene 13610 14407 . + . ID=gene-HP17_01313;Name=HP17_01313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01313 AIHX01000084.1 Genbank CDS 13610 14407 . + 0 ID=cds-EIE29317.1;Parent=gene-HP17_01313;Dbxref=NCBI_GP:EIE29317.1;Name=EIE29317.1;Note=COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit;gbkey=CDS;locus_tag=HP17_01313;product=NADH dehydrogenase subunit C;protein_id=EIE29317.1;transl_table=11 AIHX01000084.1 Genbank gene 14409 15638 . + . ID=gene-HP17_01318;Name=HP17_01318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01318 AIHX01000084.1 Genbank CDS 14409 15638 . + 0 ID=cds-EIE29318.1;Parent=gene-HP17_01318;Dbxref=NCBI_GP:EIE29318.1;Name=EIE29318.1;Note=COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7;gbkey=CDS;locus_tag=HP17_01318;product=NADH dehydrogenase subunit D;protein_id=EIE29318.1;transl_table=11 AIHX01000084.1 Genbank gene 15635 15865 . + . ID=gene-HP17_01323;Name=HP17_01323;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01323 AIHX01000084.1 Genbank CDS 15635 15865 . + 0 ID=cds-EIE29319.1;Parent=gene-HP17_01323;Dbxref=NCBI_GP:EIE29319.1;Name=EIE29319.1;gbkey=CDS;locus_tag=HP17_01323;product=putative NADH oxidoreductase I;protein_id=EIE29319.1;transl_table=11 AIHX01000084.1 Genbank gene 15868 16854 . + . ID=gene-HP17_01328;Name=HP17_01328;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01328 AIHX01000084.1 Genbank CDS 15868 16854 . + 0 ID=cds-EIE29320.1;Parent=gene-HP17_01328;Dbxref=NCBI_GP:EIE29320.1;Name=EIE29320.1;gbkey=CDS;locus_tag=HP17_01328;product=NADH-ubiquinone oxidoreductase subunit F;protein_id=EIE29320.1;transl_table=11 AIHX01000084.1 Genbank gene 16851 19382 . + . ID=gene-HP17_01333;Name=HP17_01333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01333 AIHX01000084.1 Genbank CDS 16851 19382 . + 0 ID=cds-EIE29321.1;Parent=gene-HP17_01333;Dbxref=NCBI_GP:EIE29321.1;Name=EIE29321.1;Note=COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G);gbkey=CDS;locus_tag=HP17_01333;product=NADH dehydrogenase subunit G;protein_id=EIE29321.1;transl_table=11 AIHX01000084.1 Genbank gene 19379 20368 . + . ID=gene-HP17_01338;Name=HP17_01338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01338 AIHX01000084.1 Genbank CDS 19379 20368 . + 0 ID=cds-EIE29322.1;Parent=gene-HP17_01338;Dbxref=NCBI_GP:EIE29322.1;Name=EIE29322.1;Note=COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H);gbkey=CDS;locus_tag=HP17_01338;product=NADH:ubiquinone oxidoreductase subunit H;protein_id=EIE29322.1;transl_table=11 AIHX01000084.1 Genbank gene 20379 21041 . + . ID=gene-HP17_01343;Name=HP17_01343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01343 AIHX01000084.1 Genbank CDS 20379 21041 . + 0 ID=cds-EIE29323.1;Parent=gene-HP17_01343;Dbxref=NCBI_GP:EIE29323.1;Name=EIE29323.1;Note=COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I);gbkey=CDS;locus_tag=HP17_01343;product=NADH dehydrogenase subunit I;protein_id=EIE29323.1;transl_table=11 AIHX01000084.1 Genbank gene 21034 21582 . + . ID=gene-HP17_01348;Name=HP17_01348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01348 AIHX01000084.1 Genbank CDS 21034 21582 . + 0 ID=cds-EIE29324.1;Parent=gene-HP17_01348;Dbxref=NCBI_GP:EIE29324.1;Name=EIE29324.1;Note=COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J);gbkey=CDS;locus_tag=HP17_01348;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=EIE29324.1;transl_table=11 AIHX01000084.1 Genbank gene 21579 21881 . + . ID=gene-HP17_01353;Name=HP17_01353;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01353 AIHX01000084.1 Genbank CDS 21579 21881 . + 0 ID=cds-EIE29325.1;Parent=gene-HP17_01353;Dbxref=NCBI_GP:EIE29325.1;Name=EIE29325.1;Note=COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K);gbkey=CDS;locus_tag=HP17_01353;product=NADH:ubiquinone oxidoreductase subunit K;protein_id=EIE29325.1;transl_table=11 AIHX01000084.1 Genbank gene 21884 23722 . + . ID=gene-HP17_01358;Name=HP17_01358;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01358 AIHX01000084.1 Genbank CDS 21884 23722 . + 0 ID=cds-EIE29326.1;Parent=gene-HP17_01358;Dbxref=NCBI_GP:EIE29326.1;Name=EIE29326.1;Note=COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter%2C MnhA subunit;gbkey=CDS;locus_tag=HP17_01358;product=NADH:ubiquinone oxidoreductase subunit L;protein_id=EIE29326.1;transl_table=11 AIHX01000084.1 Genbank gene 23726 25264 . + . ID=gene-HP17_01363;Name=HP17_01363;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01363 AIHX01000084.1 Genbank CDS 23726 25264 . + 0 ID=cds-EIE29327.1;Parent=gene-HP17_01363;Dbxref=NCBI_GP:EIE29327.1;Name=EIE29327.1;Note=COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M);gbkey=CDS;locus_tag=HP17_01363;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=EIE29327.1;transl_table=11 AIHX01000084.1 Genbank gene 25251 26723 . + . ID=gene-HP17_01368;Name=HP17_01368;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01368 AIHX01000084.1 Genbank CDS 25251 26723 . + 0 ID=cds-EIE29328.1;Parent=gene-HP17_01368;Dbxref=NCBI_GP:EIE29328.1;Name=EIE29328.1;Note=COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N);gbkey=CDS;locus_tag=HP17_01368;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=EIE29328.1;transl_table=11 AIHX01000084.1 Genbank gene 26713 29118 . + . ID=gene-HP17_01373;Name=HP17_01373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01373 AIHX01000084.1 Genbank CDS 26713 29118 . + 0 ID=cds-EIE29329.1;Parent=gene-HP17_01373;Dbxref=NCBI_GP:EIE29329.1;Name=EIE29329.1;Note=COG1729 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_01373;product=paralysed flagella protein PflA;protein_id=EIE29329.1;transl_table=11 AIHX01000084.1 Genbank pseudogene 29120 30498 . + . ID=gene-HP17_01378;Name=HP17_01378;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_01378;pseudo=true AIHX01000084.1 Genbank sequence_feature 29120 30498 . + . ID=id-HP17_01378;Note=potential frameshift: common BLAST hit: gi|15645889|ref|NP_208067.1| phosphomannomutase;gbkey=misc_feature;locus_tag=HP17_01378;pseudo=true AIHX01000084.1 Genbank gene 30675 30935 . + . ID=gene-HP17_01388;Name=HP17_01388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01388 AIHX01000084.1 Genbank CDS 30675 30935 . + 0 ID=cds-EIE29330.1;Parent=gene-HP17_01388;Dbxref=NCBI_GP:EIE29330.1;Name=EIE29330.1;gbkey=CDS;locus_tag=HP17_01388;product=Hypothetical protein;protein_id=EIE29330.1;transl_table=11 AIHX01000084.1 Genbank gene 31288 31512 . - . ID=gene-HP17_01393;Name=HP17_01393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01393 AIHX01000084.1 Genbank CDS 31288 31512 . - 0 ID=cds-EIE29331.1;Parent=gene-HP17_01393;Dbxref=NCBI_GP:EIE29331.1;Name=EIE29331.1;gbkey=CDS;locus_tag=HP17_01393;product=Hypothetical protein;protein_id=EIE29331.1;transl_table=11 AIHX01000084.1 Genbank gene 31740 32528 . - . ID=gene-HP17_01398;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=HP17_01398 AIHX01000084.1 Genbank CDS 31740 32528 . - 0 ID=cds-EIE29332.1;Parent=gene-HP17_01398;Dbxref=NCBI_GP:EIE29332.1;Name=EIE29332.1;Note=COG0159 Tryptophan synthase alpha chain;gbkey=CDS;gene=trpA;locus_tag=HP17_01398;product=tryptophan synthase subunit alpha;protein_id=EIE29332.1;transl_table=11 AIHX01000084.1 Genbank gene 32525 33706 . - . ID=gene-HP17_01403;Name=HP17_01403;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01403 AIHX01000084.1 Genbank CDS 32525 33706 . - 0 ID=cds-EIE29333.1;Parent=gene-HP17_01403;Dbxref=NCBI_GP:EIE29333.1;Name=EIE29333.1;Note=COG0133 Tryptophan synthase beta chain;gbkey=CDS;locus_tag=HP17_01403;product=tryptophan synthase subunit beta;protein_id=EIE29333.1;transl_table=11 AIHX01000084.1 Genbank gene 33708 35066 . - . ID=gene-HP17_01408;Name=HP17_01408;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01408 AIHX01000084.1 Genbank CDS 33708 35066 . - 0 ID=cds-EIE29334.1;Parent=gene-HP17_01408;Dbxref=NCBI_GP:EIE29334.1;Name=EIE29334.1;Note=COG0134 Indole-3-glycerol phosphate synthase;gbkey=CDS;locus_tag=HP17_01408;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=EIE29334.1;transl_table=11 AIHX01000084.1 Genbank gene 35059 36066 . - . ID=gene-HP17_01413;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=HP17_01413 AIHX01000084.1 Genbank CDS 35059 36066 . - 0 ID=cds-EIE29335.1;Parent=gene-HP17_01413;Dbxref=NCBI_GP:EIE29335.1;Name=EIE29335.1;Note=COG0547 Anthranilate phosphoribosyltransferase;gbkey=CDS;gene=trpD;locus_tag=HP17_01413;product=anthranilate phosphoribosyltransferase;protein_id=EIE29335.1;transl_table=11 AIHX01000084.1 Genbank gene 36063 36647 . - . ID=gene-HP17_01418;Name=HP17_01418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01418 AIHX01000084.1 Genbank CDS 36063 36647 . - 0 ID=cds-EIE29336.1;Parent=gene-HP17_01418;Dbxref=NCBI_GP:EIE29336.1;Name=EIE29336.1;Note=COG0512 Anthranilate/para-aminobenzoate synthases component II;gbkey=CDS;locus_tag=HP17_01418;product=anthranilate synthase component II;protein_id=EIE29336.1;transl_table=11 AIHX01000084.1 Genbank gene 36644 38146 . - . ID=gene-HP17_01423;Name=HP17_01423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01423 AIHX01000084.1 Genbank CDS 36644 38146 . - 0 ID=cds-EIE29337.1;Parent=gene-HP17_01423;Dbxref=NCBI_GP:EIE29337.1;Name=EIE29337.1;Note=COG0147 Anthranilate/para-aminobenzoate synthases component I;gbkey=CDS;locus_tag=HP17_01423;product=anthranilate synthase component I;protein_id=EIE29337.1;transl_table=11 AIHX01000084.1 Genbank gene 38377 38628 . - . ID=gene-HP17_01428;Name=HP17_01428;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01428 AIHX01000084.1 Genbank CDS 38377 38628 . - 0 ID=cds-EIE29338.1;Parent=gene-HP17_01428;Dbxref=NCBI_GP:EIE29338.1;Name=EIE29338.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_01428;product=Hypothetical protein;protein_id=EIE29338.1;transl_table=11 AIHX01000084.1 Genbank gene 38791 40053 . + . ID=gene-HP17_01433;Name=HP17_01433;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01433 AIHX01000084.1 Genbank CDS 38791 40053 . + 0 ID=cds-EIE29339.1;Parent=gene-HP17_01433;Dbxref=NCBI_GP:EIE29339.1;Name=EIE29339.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_01433;product=Hypothetical protein;protein_id=EIE29339.1;transl_table=11 AIHX01000084.1 Genbank gene 40272 41177 . - . ID=gene-HP17_01438;Name=HP17_01438;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01438 AIHX01000084.1 Genbank CDS 40272 41177 . - 0 ID=cds-EIE29340.1;Parent=gene-HP17_01438;Dbxref=NCBI_GP:EIE29340.1;Name=EIE29340.1;Note=COG0338 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_01438;product=DNA adenine methylase;protein_id=EIE29340.1;transl_table=11 AIHX01000084.1 Genbank gene 41177 42019 . - . ID=gene-HP17_01443;Name=HP17_01443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01443 AIHX01000084.1 Genbank CDS 41177 42019 . - 0 ID=cds-EIE29341.1;Parent=gene-HP17_01443;Dbxref=NCBI_GP:EIE29341.1;Name=EIE29341.1;gbkey=CDS;locus_tag=HP17_01443;product=type II restriction endonuclease;protein_id=EIE29341.1;transl_table=11 AIHX01000084.1 Genbank gene 42114 42281 . - . ID=gene-HP17_01448;Name=HP17_01448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01448 AIHX01000084.1 Genbank CDS 42114 42281 . - 0 ID=cds-EIE29342.1;Parent=gene-HP17_01448;Dbxref=NCBI_GP:EIE29342.1;Name=EIE29342.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_01448;product=adenine-specific DNA methylase;protein_id=EIE29342.1;transl_table=11 AIHX01000084.1 Genbank gene 42283 42660 . - . ID=gene-HP17_01453;Name=HP17_01453;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01453 AIHX01000084.1 Genbank CDS 42283 42660 . - 0 ID=cds-EIE29343.1;Parent=gene-HP17_01453;Dbxref=NCBI_GP:EIE29343.1;Name=EIE29343.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_01453;product=adenine-specific DNA methylase;protein_id=EIE29343.1;transl_table=11 AIHX01000084.1 Genbank gene 42723 44180 . - . ID=gene-HP17_01458;Name=HP17_01458;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01458 AIHX01000084.1 Genbank CDS 42723 44180 . - 0 ID=cds-EIE29344.1;Parent=gene-HP17_01458;Dbxref=NCBI_GP:EIE29344.1;Name=EIE29344.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_01458;product=Hypothetical protein;protein_id=EIE29344.1;transl_table=11 AIHX01000084.1 Genbank gene 44277 45317 . - . ID=gene-HP17_01463;Name=HP17_01463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01463 AIHX01000084.1 Genbank CDS 44277 45317 . - 0 ID=cds-EIE29345.1;Parent=gene-HP17_01463;Dbxref=NCBI_GP:EIE29345.1;Name=EIE29345.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_01463;product=Hypothetical protein;protein_id=EIE29345.1;transl_table=11 AIHX01000084.1 Genbank gene 45385 46077 . - . ID=gene-HP17_01468;Name=HP17_01468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01468 AIHX01000084.1 Genbank CDS 45385 46077 . - 0 ID=cds-EIE29346.1;Parent=gene-HP17_01468;Dbxref=NCBI_GP:EIE29346.1;Name=EIE29346.1;Note=COG2503 Predicted secreted acid phosphatase;gbkey=CDS;locus_tag=HP17_01468;product=Hypothetical protein;protein_id=EIE29346.1;transl_table=11 AIHX01000084.1 Genbank gene 46247 46795 . + . ID=gene-HP17_01473;Name=HP17_01473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01473 AIHX01000084.1 Genbank CDS 46247 46795 . + 0 ID=cds-EIE29347.1;Parent=gene-HP17_01473;Dbxref=NCBI_GP:EIE29347.1;Name=EIE29347.1;Note=COG2353 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_01473;product=Hypothetical protein;protein_id=EIE29347.1;transl_table=11 AIHX01000084.1 Genbank gene 46859 47512 . - . ID=gene-HP17_01478;Name=HP17_01478;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01478 AIHX01000084.1 Genbank CDS 46859 47512 . - 0 ID=cds-EIE29348.1;Parent=gene-HP17_01478;Dbxref=NCBI_GP:EIE29348.1;Name=EIE29348.1;Note=COG0819 Putative transcription activator;gbkey=CDS;locus_tag=HP17_01478;product=transcriptional regulator (tenA);protein_id=EIE29348.1;transl_table=11 AIHX01000084.1 Genbank gene 48233 48568 . + . ID=gene-HP17_01483;Name=HP17_01483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01483 AIHX01000084.1 Genbank CDS 48233 48568 . + 0 ID=cds-EIE29349.1;Parent=gene-HP17_01483;Dbxref=NCBI_GP:EIE29349.1;Name=EIE29349.1;gbkey=CDS;locus_tag=HP17_01483;product=Hypothetical protein;protein_id=EIE29349.1;transl_table=11 AIHX01000084.1 Genbank gene 48592 49062 . + . ID=gene-HP17_01488;Name=HP17_01488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01488 AIHX01000084.1 Genbank CDS 48592 49062 . + 0 ID=cds-EIE29350.1;Parent=gene-HP17_01488;Dbxref=NCBI_GP:EIE29350.1;Name=EIE29350.1;gbkey=CDS;locus_tag=HP17_01488;product=Hypothetical protein;protein_id=EIE29350.1;transl_table=11 AIHX01000084.1 Genbank gene 49073 49174 . + . ID=gene-HP17_01493;Name=HP17_01493;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01493 AIHX01000084.1 Genbank CDS 49073 49174 . + 0 ID=cds-EIE29351.1;Parent=gene-HP17_01493;Dbxref=NCBI_GP:EIE29351.1;Name=EIE29351.1;gbkey=CDS;locus_tag=HP17_01493;product=Hypothetical protein;protein_id=EIE29351.1;transl_table=11 AIHX01000084.1 Genbank gene 49248 49910 . + . ID=gene-HP17_01498;Name=HP17_01498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01498 AIHX01000084.1 Genbank CDS 49248 49910 . + 0 ID=cds-EIE29352.1;Parent=gene-HP17_01498;Dbxref=NCBI_GP:EIE29352.1;Name=EIE29352.1;Note=COG3201 Nicotinamide mononucleotide transporter;gbkey=CDS;locus_tag=HP17_01498;product=nicotinamide mononucleotide transporter;protein_id=EIE29352.1;transl_table=11 AIHX01000084.1 Genbank gene 49898 50512 . + . ID=gene-HP17_01503;Name=HP17_01503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01503 AIHX01000084.1 Genbank CDS 49898 50512 . + 0 ID=cds-EIE29353.1;Parent=gene-HP17_01503;Dbxref=NCBI_GP:EIE29353.1;Name=EIE29353.1;Note=COG1564 Thiamine pyrophosphokinase;gbkey=CDS;locus_tag=HP17_01503;product=thiamine pyrophosphokinase;protein_id=EIE29353.1;transl_table=11 AIHX01000084.1 Genbank gene 51055 51189 . - . ID=gene-HP17_01508;Name=HP17_01508;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01508 AIHX01000084.1 Genbank CDS 51055 51189 . - 0 ID=cds-EIE29354.1;Parent=gene-HP17_01508;Dbxref=NCBI_GP:EIE29354.1;Name=EIE29354.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_01508;product=Hypothetical protein;protein_id=EIE29354.1;transl_table=11 AIHX01000084.1 Genbank gene 51221 51571 . - . ID=gene-HP17_01513;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=HP17_01513 AIHX01000084.1 Genbank CDS 51221 51571 . - 0 ID=cds-EIE29355.1;Parent=gene-HP17_01513;Dbxref=NCBI_GP:EIE29355.1;Name=EIE29355.1;Note=COG0203 Ribosomal protein L17;gbkey=CDS;gene=rplQ;locus_tag=HP17_01513;product=50S ribosomal protein L17;protein_id=EIE29355.1;transl_table=11 AIHX01000084.1 Genbank gene 51571 52605 . - . ID=gene-HP17_01518;Name=HP17_01518;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01518 AIHX01000084.1 Genbank CDS 51571 52605 . - 0 ID=cds-EIE29356.1;Parent=gene-HP17_01518;Dbxref=NCBI_GP:EIE29356.1;Name=EIE29356.1;Note=COG0202 DNA-directed RNA polymerase%2C alpha subunit/40 kD subunit;gbkey=CDS;locus_tag=HP17_01518;product=DNA-directed RNA polymerase subunit alpha;protein_id=EIE29356.1;transl_table=11 AIHX01000084.1 Genbank gene 52617 53243 . - . ID=gene-HP17_01523;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=HP17_01523 AIHX01000084.1 Genbank CDS 52617 53243 . - 0 ID=cds-EIE29357.1;Parent=gene-HP17_01523;Dbxref=NCBI_GP:EIE29357.1;Name=EIE29357.1;Note=COG0522 Ribosomal protein S4 and related proteins;gbkey=CDS;gene=rpsD;locus_tag=HP17_01523;product=30S ribosomal protein S4;protein_id=EIE29357.1;transl_table=11 AIHX01000084.1 Genbank gene 53253 53525 . - . ID=gene-HP17_01528;Name=HP17_01528;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01528 AIHX01000084.1 Genbank CDS 53253 53525 . - 0 ID=cds-EIE29358.1;Parent=gene-HP17_01528;Dbxref=NCBI_GP:EIE29358.1;Name=EIE29358.1;Note=COG0100 Ribosomal protein S11;gbkey=CDS;locus_tag=HP17_01528;product=30S ribosomal protein S11;protein_id=EIE29358.1;transl_table=11 AIHX01000084.1 Genbank gene 53522 53647 . - . ID=gene-HP17_01533;Name=HP17_01533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01533 AIHX01000084.1 Genbank CDS 53522 53647 . - 0 ID=cds-EIE29359.1;Parent=gene-HP17_01533;Dbxref=NCBI_GP:EIE29359.1;Name=EIE29359.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_01533;product=Hypothetical protein;protein_id=EIE29359.1;transl_table=11 AIHX01000084.1 Genbank gene 53670 54032 . - . ID=gene-HP17_01538;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=HP17_01538 AIHX01000084.1 Genbank CDS 53670 54032 . - 0 ID=cds-EIE29360.1;Parent=gene-HP17_01538;Dbxref=NCBI_GP:EIE29360.1;Name=EIE29360.1;Note=COG0099 Ribosomal protein S13;gbkey=CDS;gene=rpsM;locus_tag=HP17_01538;product=30S ribosomal protein S13;protein_id=EIE29360.1;transl_table=11 AIHX01000084.1 Genbank gene 54036 54149 . - . ID=gene-HP17_01543;Name=HP17_01543;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01543 AIHX01000084.1 Genbank CDS 54036 54149 . - 0 ID=cds-EIE29361.1;Parent=gene-HP17_01543;Dbxref=NCBI_GP:EIE29361.1;Name=EIE29361.1;Note=COG0257 Ribosomal protein L36;gbkey=CDS;locus_tag=HP17_01543;product=Hypothetical protein;protein_id=EIE29361.1;transl_table=11 AIHX01000084.1 Genbank gene 54228 54446 . - . ID=gene-HP17_01548;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HP17_01548 AIHX01000084.1 Genbank CDS 54228 54446 . - 0 ID=cds-EIE29362.1;Parent=gene-HP17_01548;Dbxref=NCBI_GP:EIE29362.1;Name=EIE29362.1;Note=COG0361 Translation initiation factor 1 (IF-1);gbkey=CDS;gene=infA;locus_tag=HP17_01548;product=translation initiation factor IF-1;protein_id=EIE29362.1;transl_table=11 AIHX01000084.1 Genbank gene 54446 55207 . - . ID=gene-HP17_01553;Name=HP17_01553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01553 AIHX01000084.1 Genbank CDS 54446 55207 . - 0 ID=cds-EIE29363.1;Parent=gene-HP17_01553;Dbxref=NCBI_GP:EIE29363.1;Name=EIE29363.1;Note=COG0024 Methionine aminopeptidase;gbkey=CDS;locus_tag=HP17_01553;product=methionine aminopeptidase;protein_id=EIE29363.1;transl_table=11 AIHX01000084.1 Genbank gene 55207 56469 . - . ID=gene-HP17_01558;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HP17_01558 AIHX01000084.1 Genbank CDS 55207 56469 . - 0 ID=cds-EIE29364.1;Parent=gene-HP17_01558;Dbxref=NCBI_GP:EIE29364.1;Name=EIE29364.1;Note=COG0201 Preprotein translocase subunit SecY;gbkey=CDS;gene=secY;locus_tag=HP17_01558;product=preprotein translocase subunit SecY;protein_id=EIE29364.1;transl_table=11 AIHX01000084.1 Genbank gene 56512 56913 . - . ID=gene-HP17_01563;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=HP17_01563 AIHX01000084.1 Genbank CDS 56512 56913 . - 0 ID=cds-EIE29365.1;Parent=gene-HP17_01563;Dbxref=NCBI_GP:EIE29365.1;Name=EIE29365.1;Note=COG0200 Ribosomal protein L15;gbkey=CDS;gene=rplO;locus_tag=HP17_01563;product=50S ribosomal protein L15;protein_id=EIE29365.1;transl_table=11 AIHX01000084.1 Genbank gene 56933 57376 . - . ID=gene-HP17_01568;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=HP17_01568 AIHX01000084.1 Genbank CDS 56933 57376 . - 0 ID=cds-EIE29366.1;Parent=gene-HP17_01568;Dbxref=NCBI_GP:EIE29366.1;Name=EIE29366.1;Note=COG0098 Ribosomal protein S5;gbkey=CDS;gene=rpsE;locus_tag=HP17_01568;product=30S ribosomal protein S5;protein_id=EIE29366.1;transl_table=11 AIHX01000084.1 Genbank gene 57391 57747 . - . ID=gene-HP17_01573;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=HP17_01573 AIHX01000084.1 Genbank CDS 57391 57747 . - 0 ID=cds-EIE29367.1;Parent=gene-HP17_01573;Dbxref=NCBI_GP:EIE29367.1;Name=EIE29367.1;Note=COG0256 Ribosomal protein L18;gbkey=CDS;gene=rplR;locus_tag=HP17_01573;product=50S ribosomal protein L18;protein_id=EIE29367.1;transl_table=11 AIHX01000084.1 Genbank gene 57761 58297 . - . ID=gene-HP17_01578;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=HP17_01578 AIHX01000084.1 Genbank CDS 57761 58297 . - 0 ID=cds-EIE29368.1;Parent=gene-HP17_01578;Dbxref=NCBI_GP:EIE29368.1;Name=EIE29368.1;Note=COG0097 Ribosomal protein L6P/L9E;gbkey=CDS;gene=rplF;locus_tag=HP17_01578;product=50S ribosomal protein L6;protein_id=EIE29368.1;transl_table=11 AIHX01000084.1 Genbank gene 58308 58703 . - . ID=gene-HP17_01583;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=HP17_01583 AIHX01000084.1 Genbank CDS 58308 58703 . - 0 ID=cds-EIE29369.1;Parent=gene-HP17_01583;Dbxref=NCBI_GP:EIE29369.1;Name=EIE29369.1;Note=COG0096 Ribosomal protein S8;gbkey=CDS;gene=rpsH;locus_tag=HP17_01583;product=30S ribosomal protein S8;protein_id=EIE29369.1;transl_table=11 AIHX01000084.1 Genbank gene 58713 58898 . - . ID=gene-HP17_01588;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HP17_01588 AIHX01000084.1 Genbank CDS 58713 58898 . - 0 ID=cds-EIE29370.1;Parent=gene-HP17_01588;Dbxref=NCBI_GP:EIE29370.1;Name=EIE29370.1;Note=COG0199 Ribosomal protein S14;gbkey=CDS;gene=rpsN;locus_tag=HP17_01588;product=30S ribosomal protein S14;protein_id=EIE29370.1;transl_table=11 AIHX01000084.1 Genbank gene 58908 59453 . - . ID=gene-HP17_01593;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=HP17_01593 AIHX01000084.1 Genbank CDS 58908 59453 . - 0 ID=cds-EIE29371.1;Parent=gene-HP17_01593;Dbxref=NCBI_GP:EIE29371.1;Name=EIE29371.1;Note=COG0094 Ribosomal protein L5;gbkey=CDS;gene=rplE;locus_tag=HP17_01593;product=50S ribosomal protein L5;protein_id=EIE29371.1;transl_table=11 AIHX01000084.1 Genbank gene 59466 59687 . - . ID=gene-HP17_01598;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HP17_01598 AIHX01000084.1 Genbank CDS 59466 59687 . - 0 ID=cds-EIE29372.1;Parent=gene-HP17_01598;Dbxref=NCBI_GP:EIE29372.1;Name=EIE29372.1;Note=COG0198 Ribosomal protein L24;gbkey=CDS;gene=rplX;locus_tag=HP17_01598;product=50S ribosomal protein L24;protein_id=EIE29372.1;transl_table=11 AIHX01000084.1 Genbank gene 59687 60055 . - . ID=gene-HP17_01603;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=HP17_01603 AIHX01000084.1 Genbank CDS 59687 60055 . - 0 ID=cds-EIE29373.1;Parent=gene-HP17_01603;Dbxref=NCBI_GP:EIE29373.1;Name=EIE29373.1;Note=COG0093 Ribosomal protein L14;gbkey=CDS;gene=rplN;locus_tag=HP17_01603;product=50S ribosomal protein L14;protein_id=EIE29373.1;transl_table=11 AIHX01000084.1 Genbank gene 60058 60318 . - . ID=gene-HP17_01608;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=HP17_01608 AIHX01000084.1 Genbank CDS 60058 60318 . - 0 ID=cds-EIE29374.1;Parent=gene-HP17_01608;Dbxref=NCBI_GP:EIE29374.1;Name=EIE29374.1;Note=COG0186 Ribosomal protein S17;gbkey=CDS;gene=rpsQ;locus_tag=HP17_01608;product=30S ribosomal protein S17;protein_id=EIE29374.1;transl_table=11 AIHX01000084.1 Genbank gene 60332 60532 . - . ID=gene-HP17_01613;Name=HP17_01613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01613 AIHX01000084.1 Genbank CDS 60332 60532 . - 0 ID=cds-EIE29375.1;Parent=gene-HP17_01613;Dbxref=NCBI_GP:EIE29375.1;Name=EIE29375.1;Note=COG0255 Ribosomal protein L29;gbkey=CDS;locus_tag=HP17_01613;product=50S ribosomal protein L29;protein_id=EIE29375.1;transl_table=11 AIHX01000084.1 Genbank gene 60519 60944 . - . ID=gene-HP17_01618;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=HP17_01618 AIHX01000084.1 Genbank CDS 60519 60944 . - 0 ID=cds-EIE29376.1;Parent=gene-HP17_01618;Dbxref=NCBI_GP:EIE29376.1;Name=EIE29376.1;Note=COG0197 Ribosomal protein L16/L10E;gbkey=CDS;gene=rplP;locus_tag=HP17_01618;product=50S ribosomal protein L16;protein_id=EIE29376.1;transl_table=11 AIHX01000084.1 Genbank gene 60947 61651 . - . ID=gene-HP17_01623;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=HP17_01623 AIHX01000084.1 Genbank CDS 60947 61651 . - 0 ID=cds-EIE29377.1;Parent=gene-HP17_01623;Dbxref=NCBI_GP:EIE29377.1;Name=EIE29377.1;Note=COG0092 Ribosomal protein S3;gbkey=CDS;gene=rpsC;locus_tag=HP17_01623;product=30S ribosomal protein S3;protein_id=EIE29377.1;transl_table=11 AIHX01000084.1 Genbank gene 61655 62023 . - . ID=gene-HP17_01628;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=HP17_01628 AIHX01000084.1 Genbank CDS 61655 62023 . - 0 ID=cds-EIE29378.1;Parent=gene-HP17_01628;Dbxref=NCBI_GP:EIE29378.1;Name=EIE29378.1;Note=COG0091 Ribosomal protein L22;gbkey=CDS;gene=rplV;locus_tag=HP17_01628;product=50S ribosomal protein L22;protein_id=EIE29378.1;transl_table=11 AIHX01000084.1 Genbank gene 62033 62314 . - . ID=gene-HP17_01633;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=HP17_01633 AIHX01000084.1 Genbank CDS 62033 62314 . - 0 ID=cds-EIE29379.1;Parent=gene-HP17_01633;Dbxref=NCBI_GP:EIE29379.1;Name=EIE29379.1;Note=COG0185 Ribosomal protein S19;gbkey=CDS;gene=rpsS;locus_tag=HP17_01633;product=30S ribosomal protein S19;protein_id=EIE29379.1;transl_table=11 AIHX01000084.1 Genbank gene 62326 62521 . - . ID=gene-HP17_01638;Name=rplB;end_range=62521,.;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=HP17_01638;partial=true AIHX01000084.1 Genbank CDS 62326 62521 . - 1 ID=cds-EIE29380.1;Parent=gene-HP17_01638;Dbxref=NCBI_GP:EIE29380.1;Name=EIE29380.1;Note=COG0090 Ribosomal protein L2;end_range=62521,.;gbkey=CDS;gene=rplB;locus_tag=HP17_01638;partial=true;product=50S ribosomal protein L2;protein_id=EIE29380.1;transl_table=11 ##sequence-region AIHX01000085.1 1 4692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000085.1 Genbank region 1 4692 . + . ID=AIHX01000085.1:1..4692;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000085.1 Genbank gene 1 596 . - . ID=gene-HP17_01643;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=HP17_01643;partial=true;start_range=.,1 AIHX01000085.1 Genbank CDS 1 596 . - 0 ID=cds-EIE29275.1;Parent=gene-HP17_01643;Dbxref=NCBI_GP:EIE29275.1;Name=EIE29275.1;Note=COG0090 Ribosomal protein L2;gbkey=CDS;gene=rplB;locus_tag=HP17_01643;partial=true;product=50S ribosomal protein L2;protein_id=EIE29275.1;start_range=.,1;transl_table=11 AIHX01000085.1 Genbank gene 612 893 . - . ID=gene-HP17_01648;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=HP17_01648 AIHX01000085.1 Genbank CDS 612 893 . - 0 ID=cds-EIE29276.1;Parent=gene-HP17_01648;Dbxref=NCBI_GP:EIE29276.1;Name=EIE29276.1;Note=COG0089 Ribosomal protein L23;gbkey=CDS;gene=rplW;locus_tag=HP17_01648;product=50S ribosomal protein L23;protein_id=EIE29276.1;transl_table=11 AIHX01000085.1 Genbank gene 897 1544 . - . ID=gene-HP17_01653;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=HP17_01653 AIHX01000085.1 Genbank CDS 897 1544 . - 0 ID=cds-EIE29277.1;Parent=gene-HP17_01653;Dbxref=NCBI_GP:EIE29277.1;Name=EIE29277.1;Note=COG0088 Ribosomal protein L4;gbkey=CDS;gene=rplD;locus_tag=HP17_01653;product=50S ribosomal protein L4;protein_id=EIE29277.1;transl_table=11 AIHX01000085.1 Genbank gene 1578 2153 . - . ID=gene-HP17_01658;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=HP17_01658 AIHX01000085.1 Genbank CDS 1578 2153 . - 0 ID=cds-EIE29278.1;Parent=gene-HP17_01658;Dbxref=NCBI_GP:EIE29278.1;Name=EIE29278.1;Note=COG0087 Ribosomal protein L3;gbkey=CDS;gene=rplC;locus_tag=HP17_01658;product=50S ribosomal protein L3;protein_id=EIE29278.1;transl_table=11 AIHX01000085.1 Genbank gene 2190 2504 . - . ID=gene-HP17_01663;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HP17_01663 AIHX01000085.1 Genbank CDS 2190 2504 . - 0 ID=cds-EIE29279.1;Parent=gene-HP17_01663;Dbxref=NCBI_GP:EIE29279.1;Name=EIE29279.1;Note=COG0051 Ribosomal protein S10;gbkey=CDS;gene=rpsJ;locus_tag=HP17_01663;product=30S ribosomal protein S10;protein_id=EIE29279.1;transl_table=11 AIHX01000085.1 Genbank gene 2714 3802 . + . ID=gene-HP17_01668;Name=HP17_01668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01668 AIHX01000085.1 Genbank CDS 2714 3802 . + 0 ID=cds-EIE29280.1;Parent=gene-HP17_01668;Dbxref=NCBI_GP:EIE29280.1;Name=EIE29280.1;Note=COG1373 Predicted ATPase (AAA+ superfamily);gbkey=CDS;locus_tag=HP17_01668;product=Hypothetical protein;protein_id=EIE29280.1;transl_table=11 AIHX01000085.1 Genbank gene 3999 4577 . + . ID=gene-HP17_01673;Name=HP17_01673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01673 AIHX01000085.1 Genbank CDS 3999 4577 . + 0 ID=cds-EIE29281.1;Parent=gene-HP17_01673;Dbxref=NCBI_GP:EIE29281.1;Name=EIE29281.1;gbkey=CDS;locus_tag=HP17_01673;product=Hypothetical protein;protein_id=EIE29281.1;transl_table=11 AIHX01000085.1 Genbank gene 4551 4692 . - . ID=gene-HP17_01678;Name=rnhB;end_range=4692,.;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HP17_01678;partial=true AIHX01000085.1 Genbank CDS 4551 4692 . - 1 ID=cds-EIE29282.1;Parent=gene-HP17_01678;Dbxref=NCBI_GP:EIE29282.1;Name=EIE29282.1;Note=COG0164 Ribonuclease HII;end_range=4692,.;gbkey=CDS;gene=rnhB;locus_tag=HP17_01678;partial=true;product=ribonuclease HII;protein_id=EIE29282.1;transl_table=11 ##sequence-region AIHX01000086.1 1 1093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000086.1 Genbank region 1 1093 . + . ID=AIHX01000086.1:1..1093;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000086.1 Genbank gene 1 456 . - . ID=gene-HP17_01683;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HP17_01683;partial=true;start_range=.,1 AIHX01000086.1 Genbank CDS 1 456 . - 0 ID=cds-EIE29269.1;Parent=gene-HP17_01683;Dbxref=NCBI_GP:EIE29269.1;Name=EIE29269.1;Note=COG0164 Ribonuclease HII;gbkey=CDS;gene=rnhB;locus_tag=HP17_01683;partial=true;product=ribonuclease HII;protein_id=EIE29269.1;start_range=.,1;transl_table=11 AIHX01000086.1 Genbank gene 487 777 . - . ID=gene-HP17_01688;Name=HP17_01688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01688 AIHX01000086.1 Genbank CDS 487 777 . - 0 ID=cds-EIE29270.1;Parent=gene-HP17_01688;Dbxref=NCBI_GP:EIE29270.1;Name=EIE29270.1;gbkey=CDS;locus_tag=HP17_01688;product=Hypothetical protein;protein_id=EIE29270.1;transl_table=11 AIHX01000086.1 Genbank gene 761 1093 . - . ID=gene-HP17_01693;Name=fumC;end_range=1093,.;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HP17_01693;partial=true AIHX01000086.1 Genbank CDS 761 1093 . - 0 ID=cds-EIE29271.1;Parent=gene-HP17_01693;Dbxref=NCBI_GP:EIE29271.1;Name=EIE29271.1;Note=COG0114 Fumarase;end_range=1093,.;gbkey=CDS;gene=fumC;locus_tag=HP17_01693;partial=true;product=fumarate hydratase;protein_id=EIE29271.1;transl_table=11 ##sequence-region AIHX01000087.1 1 16222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000087.1 Genbank region 1 16222 . + . ID=AIHX01000087.1:1..16222;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000087.1 Genbank gene 1 1026 . - . ID=gene-HP17_01698;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HP17_01698;partial=true;start_range=.,1 AIHX01000087.1 Genbank CDS 1 1026 . - 0 ID=cds-EIE29230.1;Parent=gene-HP17_01698;Dbxref=NCBI_GP:EIE29230.1;Name=EIE29230.1;Note=COG0114 Fumarase;gbkey=CDS;gene=fumC;locus_tag=HP17_01698;partial=true;product=fumarate hydratase;protein_id=EIE29230.1;start_range=.,1;transl_table=11 AIHX01000087.1 Genbank gene 1201 1578 . + . ID=gene-HP17_01703;Name=HP17_01703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01703 AIHX01000087.1 Genbank CDS 1201 1578 . + 0 ID=cds-EIE29231.1;Parent=gene-HP17_01703;Dbxref=NCBI_GP:EIE29231.1;Name=EIE29231.1;gbkey=CDS;locus_tag=HP17_01703;product=Hypothetical protein;protein_id=EIE29231.1;transl_table=11 AIHX01000087.1 Genbank gene 1583 2821 . + . ID=gene-HP17_01708;Name=HP17_01708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01708 AIHX01000087.1 Genbank CDS 1583 2821 . + 0 ID=cds-EIE29232.1;Parent=gene-HP17_01708;Dbxref=NCBI_GP:EIE29232.1;Name=EIE29232.1;gbkey=CDS;locus_tag=HP17_01708;product=Hypothetical protein;protein_id=EIE29232.1;transl_table=11 AIHX01000087.1 Genbank gene 2818 3834 . + . ID=gene-HP17_01713;Name=HP17_01713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01713 AIHX01000087.1 Genbank CDS 2818 3834 . + 0 ID=cds-EIE29233.1;Parent=gene-HP17_01713;Dbxref=NCBI_GP:EIE29233.1;Name=EIE29233.1;Note=COG0845 Membrane-fusion protein;gbkey=CDS;locus_tag=HP17_01713;product=putative cobalt-zinc-cadmium resistance protein CzcB;protein_id=EIE29233.1;transl_table=11 AIHX01000087.1 Genbank gene 3837 6944 . + . ID=gene-HP17_01718;Name=HP17_01718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01718 AIHX01000087.1 Genbank CDS 3837 6944 . + 0 ID=cds-EIE29234.1;Parent=gene-HP17_01718;Dbxref=NCBI_GP:EIE29234.1;Name=EIE29234.1;Note=COG3696 Putative silver efflux pump;gbkey=CDS;locus_tag=HP17_01718;product=cation efflux system protein;protein_id=EIE29234.1;transl_table=11 AIHX01000087.1 Genbank gene 6925 7281 . - . ID=gene-HP17_01723;Name=HP17_01723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01723 AIHX01000087.1 Genbank CDS 6925 7281 . - 0 ID=cds-EIE29235.1;Parent=gene-HP17_01723;Dbxref=NCBI_GP:EIE29235.1;Name=EIE29235.1;Note=COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance);gbkey=CDS;locus_tag=HP17_01723;product=Hypothetical protein;protein_id=EIE29235.1;transl_table=11 AIHX01000087.1 Genbank gene 7275 7961 . - . ID=gene-HP17_01728;Name=HP17_01728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01728 AIHX01000087.1 Genbank CDS 7275 7961 . - 0 ID=cds-EIE29236.1;Parent=gene-HP17_01728;Dbxref=NCBI_GP:EIE29236.1;Name=EIE29236.1;Note=COG1296 Predicted branched-chain amino acid permease (azaleucine resistance);gbkey=CDS;locus_tag=HP17_01728;product=branched-chain amino acid transport protein;protein_id=EIE29236.1;transl_table=11 AIHX01000087.1 Genbank gene 7972 9081 . - . ID=gene-HP17_01733;Name=HP17_01733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01733 AIHX01000087.1 Genbank CDS 7972 9081 . - 0 ID=cds-EIE29237.1;Parent=gene-HP17_01733;Dbxref=NCBI_GP:EIE29237.1;Name=EIE29237.1;Note=COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain;gbkey=CDS;locus_tag=HP17_01733;product=chaperone protein DnaJ;protein_id=EIE29237.1;transl_table=11 AIHX01000087.1 Genbank gene 9205 10335 . + . ID=gene-HP17_01738;Name=HP17_01738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01738 AIHX01000087.1 Genbank CDS 9205 10335 . + 0 ID=cds-EIE29238.1;Parent=gene-HP17_01738;Dbxref=NCBI_GP:EIE29238.1;Name=EIE29238.1;gbkey=CDS;locus_tag=HP17_01738;product=Hypothetical protein;protein_id=EIE29238.1;transl_table=11 AIHX01000087.1 Genbank gene 10863 11222 . + . ID=gene-HP17_01743;Name=HP17_01743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01743 AIHX01000087.1 Genbank CDS 10863 11222 . + 0 ID=cds-EIE29239.1;Parent=gene-HP17_01743;Dbxref=NCBI_GP:EIE29239.1;Name=EIE29239.1;Note=COG1432 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_01743;product=Hypothetical protein;protein_id=EIE29239.1;transl_table=11 AIHX01000087.1 Genbank gene 11286 12314 . - . ID=gene-HP17_01748;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=HP17_01748 AIHX01000087.1 Genbank CDS 11286 12314 . - 0 ID=cds-EIE29240.1;Parent=gene-HP17_01748;Dbxref=NCBI_GP:EIE29240.1;Name=EIE29240.1;Note=COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase%2C contains the PP-loop ATPase domain;gbkey=CDS;gene=mnmA;locus_tag=HP17_01748;product=tRNA-specific 2-thiouridylase MnmA;protein_id=EIE29240.1;transl_table=11 AIHX01000087.1 Genbank gene 12456 13217 . + . ID=gene-HP17_01753;Name=HP17_01753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01753 AIHX01000087.1 Genbank CDS 12456 13217 . + 0 ID=cds-EIE29241.1;Parent=gene-HP17_01753;Dbxref=NCBI_GP:EIE29241.1;Name=EIE29241.1;Note=COG2214 DnaJ-class molecular chaperone;gbkey=CDS;locus_tag=HP17_01753;product=Hypothetical protein;protein_id=EIE29241.1;transl_table=11 AIHX01000087.1 Genbank gene 13214 13729 . - . ID=gene-HP17_01758;Name=HP17_01758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01758 AIHX01000087.1 Genbank CDS 13214 13729 . - 0 ID=cds-EIE29242.1;Parent=gene-HP17_01758;Dbxref=NCBI_GP:EIE29242.1;Name=EIE29242.1;Note=COG1057 Nicotinic acid mononucleotide adenylyltransferase;gbkey=CDS;locus_tag=HP17_01758;product=putative nicotinate-nucleotide adenylyltransferase;protein_id=EIE29242.1;transl_table=11 AIHX01000087.1 Genbank gene 13722 14168 . - . ID=gene-HP17_01763;Name=HP17_01763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01763 AIHX01000087.1 Genbank CDS 13722 14168 . - 0 ID=cds-EIE29243.1;Parent=gene-HP17_01763;Dbxref=NCBI_GP:EIE29243.1;Name=EIE29243.1;Note=COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain;gbkey=CDS;locus_tag=HP17_01763;product=nickel responsive regulator;protein_id=EIE29243.1;transl_table=11 AIHX01000087.1 Genbank gene 14491 14928 . + . ID=gene-HP17_01768;Name=HP17_01768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01768 AIHX01000087.1 Genbank CDS 14491 14928 . + 0 ID=cds-EIE29244.1;Parent=gene-HP17_01768;Dbxref=NCBI_GP:EIE29244.1;Name=EIE29244.1;Note=COG0811 Biopolymer transport proteins;gbkey=CDS;locus_tag=HP17_01768;product=biopolymer transport protein;protein_id=EIE29244.1;transl_table=11 AIHX01000087.1 Genbank gene 14925 15314 . + . ID=gene-HP17_01773;Name=HP17_01773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01773 AIHX01000087.1 Genbank CDS 14925 15314 . + 0 ID=cds-EIE29245.1;Parent=gene-HP17_01773;Dbxref=NCBI_GP:EIE29245.1;Name=EIE29245.1;Note=COG0848 Biopolymer transport protein;gbkey=CDS;locus_tag=HP17_01773;product=biopolymer transport protein ExbD;protein_id=EIE29245.1;transl_table=11 AIHX01000087.1 Genbank gene 15280 16134 . + . ID=gene-HP17_01778;Name=HP17_01778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01778 AIHX01000087.1 Genbank CDS 15280 16134 . + 0 ID=cds-EIE29246.1;Parent=gene-HP17_01778;Dbxref=NCBI_GP:EIE29246.1;Name=EIE29246.1;Note=COG0810 Periplasmic protein TonB%2C links inner and outer membranes;gbkey=CDS;locus_tag=HP17_01778;product=siderophore-mediated iron transport protein;protein_id=EIE29246.1;transl_table=11 ##sequence-region AIHX01000088.1 1 1339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000088.1 Genbank region 1 1339 . + . ID=AIHX01000088.1:1..1339;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000088.1 Genbank gene 1 1131 . - . ID=gene-HP17_01788;Name=HP17_01788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01788;partial=true;start_range=.,1 AIHX01000088.1 Genbank CDS 1 1131 . - 0 ID=cds-EIE29223.1;Parent=gene-HP17_01788;Dbxref=NCBI_GP:EIE29223.1;Name=EIE29223.1;gbkey=CDS;locus_tag=HP17_01788;partial=true;product=outer membrane protein;protein_id=EIE29223.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000089.1 1 3684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000089.1 Genbank region 1 3684 . + . ID=AIHX01000089.1:1..3684;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000089.1 Genbank gene 139 273 . + . ID=gene-HP17_00085;Name=HP17_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00085 AIHX01000089.1 Genbank CDS 139 273 . + 0 ID=cds-EIE29218.1;Parent=gene-HP17_00085;Dbxref=NCBI_GP:EIE29218.1;Name=EIE29218.1;gbkey=CDS;locus_tag=HP17_00085;product=Hypothetical protein;protein_id=EIE29218.1;transl_table=11 AIHX01000089.1 Genbank gene 503 961 . - . ID=gene-HP17_00090;Name=HP17_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00090 AIHX01000089.1 Genbank CDS 503 961 . - 0 ID=cds-EIE29219.1;Parent=gene-HP17_00090;Dbxref=NCBI_GP:EIE29219.1;Name=EIE29219.1;Note=COG1225 Peroxiredoxin;gbkey=CDS;locus_tag=HP17_00090;product=bacterioferritin comigratory protein;protein_id=EIE29219.1;transl_table=11 AIHX01000089.1 Genbank gene 971 1606 . - . ID=gene-HP17_00095;Name=HP17_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00095 AIHX01000089.1 Genbank CDS 971 1606 . - 0 ID=cds-EIE29220.1;Parent=gene-HP17_00095;Dbxref=NCBI_GP:EIE29220.1;Name=EIE29220.1;Note=COG1556 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_00095;product=Hypothetical protein;protein_id=EIE29220.1;transl_table=11 AIHX01000089.1 Genbank pseudogene 1599 3043 . - . ID=gene-HP17_00100;Name=HP17_00100;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_00100;pseudo=true AIHX01000089.1 Genbank sequence_feature 1599 3043 . - . ID=id-HP17_00100;Note=potential frameshift: common BLAST hit: gi|308182312|ref|YP_003926439.1| iron-sulfur cluster binding protein;gbkey=misc_feature;locus_tag=HP17_00100;pseudo=true AIHX01000089.1 Genbank gene 3072 3684 . - . ID=gene-HP17_00110;Name=HP17_00110;end_range=3684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00110;partial=true AIHX01000089.1 Genbank CDS 3072 3684 . - 1 ID=cds-EIE29221.1;Parent=gene-HP17_00110;Dbxref=NCBI_GP:EIE29221.1;Name=EIE29221.1;Note=COG0247 Fe-S oxidoreductase;end_range=3684,.;gbkey=CDS;locus_tag=HP17_00110;partial=true;product=Fe-S oxidoreductase;protein_id=EIE29221.1;transl_table=11 ##sequence-region AIHX01000090.1 1 1135 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000090.1 Genbank region 1 1135 . + . ID=AIHX01000090.1:1..1135;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000090.1 Genbank gene 126 881 . - . ID=gene-HP17_01793;Name=HP17_01793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01793 AIHX01000090.1 Genbank CDS 126 881 . - 0 ID=cds-EIE29215.1;Parent=gene-HP17_01793;Dbxref=NCBI_GP:EIE29215.1;Name=EIE29215.1;Note=COG0748 Putative heme iron utilization protein;gbkey=CDS;locus_tag=HP17_01793;product=putative heme iron utilization protein;protein_id=EIE29215.1;transl_table=11 AIHX01000090.1 Genbank gene 942 1133 . - . ID=gene-HP17_01798;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=HP17_01798 AIHX01000090.1 Genbank CDS 942 1133 . - 0 ID=cds-EIE29216.1;Parent=gene-HP17_01798;Dbxref=NCBI_GP:EIE29216.1;Name=EIE29216.1;Note=COG0018 Arginyl-tRNA synthetase;gbkey=CDS;gene=argS;locus_tag=HP17_01798;product=arginyl-tRNA synthetase;protein_id=EIE29216.1;transl_table=11 ##sequence-region AIHX01000091.1 1 13543 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000091.1 Genbank region 1 13543 . + . ID=AIHX01000091.1:1..13543;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000091.1 Genbank gene 1 1414 . - . ID=gene-HP17_01803;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=HP17_01803;partial=true;start_range=.,1 AIHX01000091.1 Genbank CDS 1 1414 . - 0 ID=cds-EIE29195.1;Parent=gene-HP17_01803;Dbxref=NCBI_GP:EIE29195.1;Name=EIE29195.1;Note=COG0018 Arginyl-tRNA synthetase;gbkey=CDS;gene=argS;locus_tag=HP17_01803;partial=true;product=arginyl-tRNA synthetase;protein_id=EIE29195.1;start_range=.,1;transl_table=11 AIHX01000091.1 Genbank gene 1417 1656 . - . ID=gene-HP17_01808;Name=HP17_01808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01808 AIHX01000091.1 Genbank CDS 1417 1656 . - 0 ID=cds-EIE29196.1;Parent=gene-HP17_01808;Dbxref=NCBI_GP:EIE29196.1;Name=EIE29196.1;Note=COG1826 Sec-independent protein secretion pathway components;gbkey=CDS;locus_tag=HP17_01808;product=Sec-independent protein translocase protein tatA/E-like protein;protein_id=EIE29196.1;transl_table=11 AIHX01000091.1 Genbank gene 1727 2347 . - . ID=gene-HP17_01813;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=HP17_01813 AIHX01000091.1 Genbank CDS 1727 2347 . - 0 ID=cds-EIE29197.1;Parent=gene-HP17_01813;Dbxref=NCBI_GP:EIE29197.1;Name=EIE29197.1;Note=COG0194 Guanylate kinase;gbkey=CDS;gene=gmk;locus_tag=HP17_01813;product=guanylate kinase;protein_id=EIE29197.1;transl_table=11 AIHX01000091.1 Genbank gene 2340 3767 . - . ID=gene-HP17_01818;Name=HP17_01818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01818 AIHX01000091.1 Genbank CDS 2340 3767 . - 0 ID=cds-EIE29198.1;Parent=gene-HP17_01818;Dbxref=NCBI_GP:EIE29198.1;Name=EIE29198.1;gbkey=CDS;locus_tag=HP17_01818;product=poly E-rich protein;protein_id=EIE29198.1;transl_table=11 AIHX01000091.1 Genbank gene 3780 3905 . - . ID=gene-HP17_01823;Name=HP17_01823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01823 AIHX01000091.1 Genbank CDS 3780 3905 . - 0 ID=cds-EIE29199.1;Parent=gene-HP17_01823;Dbxref=NCBI_GP:EIE29199.1;Name=EIE29199.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_01823;product=Hypothetical protein;protein_id=EIE29199.1;transl_table=11 AIHX01000091.1 Genbank gene 3909 4451 . + . ID=gene-HP17_01828;Name=HP17_01828;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01828 AIHX01000091.1 Genbank CDS 3909 4451 . + 0 ID=cds-EIE29200.1;Parent=gene-HP17_01828;Dbxref=NCBI_GP:EIE29200.1;Name=EIE29200.1;Note=COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes;gbkey=CDS;locus_tag=HP17_01828;product=nuclease NucT;protein_id=EIE29200.1;transl_table=11 AIHX01000091.1 Genbank gene 4460 5197 . - . ID=gene-HP17_01833;Name=HP17_01833;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01833 AIHX01000091.1 Genbank CDS 4460 5197 . - 0 ID=cds-EIE29201.1;Parent=gene-HP17_01833;Dbxref=NCBI_GP:EIE29201.1;Name=EIE29201.1;gbkey=CDS;locus_tag=HP17_01833;product=outer membrane protein HorC;protein_id=EIE29201.1;transl_table=11 AIHX01000091.1 Genbank gene 5335 6048 . + . ID=gene-HP17_01838;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=HP17_01838 AIHX01000091.1 Genbank CDS 5335 6048 . + 0 ID=cds-EIE29202.1;Parent=gene-HP17_01838;Dbxref=NCBI_GP:EIE29202.1;Name=EIE29202.1;Note=COG2063 Flagellar basal body L-ring protein;gbkey=CDS;gene=flgH;locus_tag=HP17_01838;product=flagellar basal body L-ring protein;protein_id=EIE29202.1;transl_table=11 AIHX01000091.1 Genbank gene 6072 6755 . + . ID=gene-HP17_01843;Name=HP17_01843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01843 AIHX01000091.1 Genbank CDS 6072 6755 . + 0 ID=cds-EIE29203.1;Parent=gene-HP17_01843;Dbxref=NCBI_GP:EIE29203.1;Name=EIE29203.1;Note=COG1083 CMP-N-acetylneuraminic acid synthetase;gbkey=CDS;locus_tag=HP17_01843;product=CMP-N-acetylneuraminic acid synthetase;protein_id=EIE29203.1;transl_table=11 AIHX01000091.1 Genbank gene 6746 7618 . + . ID=gene-HP17_01848;Name=HP17_01848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01848 AIHX01000091.1 Genbank CDS 6746 7618 . + 0 ID=cds-EIE29204.1;Parent=gene-HP17_01848;Dbxref=NCBI_GP:EIE29204.1;Name=EIE29204.1;Note=COG3980 Spore coat polysaccharide biosynthesis protein%2C predicted glycosyltransferase;gbkey=CDS;locus_tag=HP17_01848;product=CMP-N-acetylneuraminic acid synthetase (neuA);protein_id=EIE29204.1;transl_table=11 AIHX01000091.1 Genbank gene 7615 8157 . + . ID=gene-HP17_01853;Name=HP17_01853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01853 AIHX01000091.1 Genbank CDS 7615 8157 . + 0 ID=cds-EIE29205.1;Parent=gene-HP17_01853;Dbxref=NCBI_GP:EIE29205.1;Name=EIE29205.1;Note=COG1670 Acetyltransferases%2C including N-acetylases of ribosomal proteins;gbkey=CDS;locus_tag=HP17_01853;product=flagellar biosynthesis protein;protein_id=EIE29205.1;transl_table=11 AIHX01000091.1 Genbank gene 8090 9028 . - . ID=gene-HP17_01858;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=HP17_01858 AIHX01000091.1 Genbank CDS 8090 9028 . - 0 ID=cds-EIE29206.1;Parent=gene-HP17_01858;Dbxref=NCBI_GP:EIE29206.1;Name=EIE29206.1;Note=COG1663 Tetraacyldisaccharide-1-P 4'-kinase;gbkey=CDS;gene=lpxK;locus_tag=HP17_01858;product=tetraacyldisaccharide 4'-kinase;protein_id=EIE29206.1;transl_table=11 AIHX01000091.1 Genbank gene 9025 9807 . - . ID=gene-HP17_01863;Name=HP17_01863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01863 AIHX01000091.1 Genbank CDS 9025 9807 . - 0 ID=cds-EIE29207.1;Parent=gene-HP17_01863;Dbxref=NCBI_GP:EIE29207.1;Name=EIE29207.1;Note=COG0171 NAD synthase;gbkey=CDS;locus_tag=HP17_01863;product=NAD synthetase;protein_id=EIE29207.1;transl_table=11 AIHX01000091.1 Genbank gene 9892 9968 . + . ID=gene-HP17_t01900;Name=HP17_t01900;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t01900;product=tRNA-Arg AIHX01000091.1 Genbank tRNA 9892 9968 . + . ID=rna-HP17_t01900;Parent=gene-HP17_t01900;gbkey=tRNA;locus_tag=HP17_t01900;product=tRNA-Arg AIHX01000091.1 Genbank exon 9892 9968 . + . ID=exon-HP17_t01900-1;Parent=rna-HP17_t01900;gbkey=tRNA;locus_tag=HP17_t01900;product=tRNA-Arg AIHX01000091.1 Genbank gene 10056 11048 . + . ID=gene-HP17_01868;Name=HP17_01868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01868 AIHX01000091.1 Genbank CDS 10056 11048 . + 0 ID=cds-EIE29208.1;Parent=gene-HP17_01868;Dbxref=NCBI_GP:EIE29208.1;Name=EIE29208.1;Note=COG0059 Ketol-acid reductoisomerase;gbkey=CDS;locus_tag=HP17_01868;product=ketol-acid reductoisomerase;protein_id=EIE29208.1;transl_table=11 AIHX01000091.1 Genbank gene 11072 11878 . + . ID=gene-HP17_01873;Name=HP17_01873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01873 AIHX01000091.1 Genbank CDS 11072 11878 . + 0 ID=cds-EIE29209.1;Parent=gene-HP17_01873;Dbxref=NCBI_GP:EIE29209.1;Name=EIE29209.1;Note=COG2894 Septum formation inhibitor-activating ATPase;gbkey=CDS;locus_tag=HP17_01873;product=cell division inhibitor;protein_id=EIE29209.1;transl_table=11 AIHX01000091.1 Genbank gene 11875 12108 . + . ID=gene-HP17_01878;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=HP17_01878 AIHX01000091.1 Genbank CDS 11875 12108 . + 0 ID=cds-EIE29210.1;Parent=gene-HP17_01878;Dbxref=NCBI_GP:EIE29210.1;Name=EIE29210.1;Note=COG0851 Septum formation topological specificity factor;gbkey=CDS;gene=minE;locus_tag=HP17_01878;product=cell division topological specificity factor MinE;protein_id=EIE29210.1;transl_table=11 AIHX01000091.1 Genbank gene 12120 12920 . + . ID=gene-HP17_01883;Name=HP17_01883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01883 AIHX01000091.1 Genbank CDS 12120 12920 . + 0 ID=cds-EIE29211.1;Parent=gene-HP17_01883;Dbxref=NCBI_GP:EIE29211.1;Name=EIE29211.1;Note=COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake;gbkey=CDS;locus_tag=HP17_01883;product=Hypothetical protein;protein_id=EIE29211.1;transl_table=11 AIHX01000091.1 Genbank gene 12917 13321 . + . ID=gene-HP17_01888;Name=HP17_01888;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01888 AIHX01000091.1 Genbank CDS 12917 13321 . + 0 ID=cds-EIE29212.1;Parent=gene-HP17_01888;Dbxref=NCBI_GP:EIE29212.1;Name=EIE29212.1;Note=COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis);gbkey=CDS;locus_tag=HP17_01888;product=Holliday junction resolvase-like protein;protein_id=EIE29212.1;transl_table=11 AIHX01000091.1 Genbank gene 13428 13543 . - . ID=gene-HP17_01893;Name=HP17_01893;end_range=13543,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01893;partial=true AIHX01000091.1 Genbank CDS 13428 13543 . - 2 ID=cds-EIE29213.1;Parent=gene-HP17_01893;Dbxref=NCBI_GP:EIE29213.1;Name=EIE29213.1;Note=not present in 26695~not present in J99~not present in P79;end_range=13543,.;gbkey=CDS;locus_tag=HP17_01893;partial=true;product=Hypothetical protein;protein_id=EIE29213.1;transl_table=11 ##sequence-region AIHX01000092.1 1 9195 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000092.1 Genbank region 1 9195 . + . ID=AIHX01000092.1:1..9195;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000092.1 Genbank gene 1 655 . + . ID=gene-HP17_01900;Name=HP17_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01900;partial=true;start_range=.,1 AIHX01000092.1 Genbank CDS 1 655 . + 1 ID=cds-EIE29175.1;Parent=gene-HP17_01900;Dbxref=NCBI_GP:EIE29175.1;Name=EIE29175.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_01900;partial=true;product=cysteine-rich protein C;protein_id=EIE29175.1;start_range=.,1;transl_table=11 AIHX01000092.1 Genbank gene 770 1108 . + . ID=gene-HP17_01905;Name=HP17_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01905 AIHX01000092.1 Genbank CDS 770 1108 . + 0 ID=cds-EIE29176.1;Parent=gene-HP17_01905;Dbxref=NCBI_GP:EIE29176.1;Name=EIE29176.1;gbkey=CDS;locus_tag=HP17_01905;product=Hypothetical protein;protein_id=EIE29176.1;transl_table=11 AIHX01000092.1 Genbank gene 1092 1652 . + . ID=gene-HP17_01910;Name=HP17_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01910 AIHX01000092.1 Genbank CDS 1092 1652 . + 0 ID=cds-EIE29177.1;Parent=gene-HP17_01910;Dbxref=NCBI_GP:EIE29177.1;Name=EIE29177.1;gbkey=CDS;locus_tag=HP17_01910;product=Hypothetical protein;protein_id=EIE29177.1;transl_table=11 AIHX01000092.1 Genbank gene 2350 2445 . + . ID=gene-HP17_01925;Name=HP17_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01925 AIHX01000092.1 Genbank CDS 2350 2445 . + 0 ID=cds-EIE29178.1;Parent=gene-HP17_01925;Dbxref=NCBI_GP:EIE29178.1;Name=EIE29178.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_01925;product=Hypothetical protein;protein_id=EIE29178.1;transl_table=11 AIHX01000092.1 Genbank gene 2546 2674 . + . ID=gene-HP17_01930;Name=HP17_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01930 AIHX01000092.1 Genbank CDS 2546 2674 . + 0 ID=cds-EIE29179.1;Parent=gene-HP17_01930;Dbxref=NCBI_GP:EIE29179.1;Name=EIE29179.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_01930;product=Hypothetical protein;protein_id=EIE29179.1;transl_table=11 AIHX01000092.1 Genbank gene 2798 3022 . + . ID=gene-HP17_01935;Name=HP17_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01935 AIHX01000092.1 Genbank CDS 2798 3022 . + 0 ID=cds-EIE29180.1;Parent=gene-HP17_01935;Dbxref=NCBI_GP:EIE29180.1;Name=EIE29180.1;gbkey=CDS;locus_tag=HP17_01935;product=Hypothetical protein;protein_id=EIE29180.1;transl_table=11 AIHX01000092.1 Genbank gene 3022 3807 . + . ID=gene-HP17_01940;Name=HP17_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01940 AIHX01000092.1 Genbank CDS 3022 3807 . + 0 ID=cds-EIE29181.1;Parent=gene-HP17_01940;Dbxref=NCBI_GP:EIE29181.1;Name=EIE29181.1;gbkey=CDS;locus_tag=HP17_01940;product=Hypothetical protein;protein_id=EIE29181.1;transl_table=11 AIHX01000092.1 Genbank gene 3797 4021 . + . ID=gene-HP17_01945;Name=HP17_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01945 AIHX01000092.1 Genbank CDS 3797 4021 . + 0 ID=cds-EIE29182.1;Parent=gene-HP17_01945;Dbxref=NCBI_GP:EIE29182.1;Name=EIE29182.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_01945;product=Hypothetical protein;protein_id=EIE29182.1;transl_table=11 AIHX01000092.1 Genbank gene 4022 5002 . + . ID=gene-HP17_01950;Name=HP17_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01950 AIHX01000092.1 Genbank CDS 4022 5002 . + 0 ID=cds-EIE29183.1;Parent=gene-HP17_01950;Dbxref=NCBI_GP:EIE29183.1;Name=EIE29183.1;gbkey=CDS;locus_tag=HP17_01950;product=Hypothetical protein;protein_id=EIE29183.1;transl_table=11 AIHX01000092.1 Genbank gene 5020 5913 . - . ID=gene-HP17_01955;Name=HP17_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01955 AIHX01000092.1 Genbank CDS 5020 5913 . - 0 ID=cds-EIE29184.1;Parent=gene-HP17_01955;Dbxref=NCBI_GP:EIE29184.1;Name=EIE29184.1;Note=COG0564 Pseudouridylate synthases%2C 23S RNA-specific;gbkey=CDS;locus_tag=HP17_01955;product=pseudouridine synthase D;protein_id=EIE29184.1;transl_table=11 AIHX01000092.1 Genbank gene 5913 7463 . - . ID=gene-HP17_01960;Name=HP17_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01960 AIHX01000092.1 Genbank CDS 5913 7463 . - 0 ID=cds-EIE29185.1;Parent=gene-HP17_01960;Dbxref=NCBI_GP:EIE29185.1;Name=EIE29185.1;Note=COG0608 Single-stranded DNA-specific exonuclease;gbkey=CDS;locus_tag=HP17_01960;product=single-stranded-DNA-specific exonuclease;protein_id=EIE29185.1;transl_table=11 AIHX01000092.1 Genbank gene 7472 9088 . - . ID=gene-HP17_01965;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HP17_01965 AIHX01000092.1 Genbank CDS 7472 9088 . - 0 ID=cds-EIE29186.1;Parent=gene-HP17_01965;Dbxref=NCBI_GP:EIE29186.1;Name=EIE29186.1;Note=COG0504 CTP synthase (UTP-ammonia lyase);gbkey=CDS;gene=pyrG;locus_tag=HP17_01965;product=CTP synthetase;protein_id=EIE29186.1;transl_table=11 ##sequence-region AIHX01000093.1 1 20270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000093.1 Genbank region 1 20270 . + . ID=AIHX01000093.1:1..20270;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000093.1 Genbank gene 131 799 . + . ID=gene-HP17_01970;Name=HP17_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01970 AIHX01000093.1 Genbank CDS 131 799 . + 0 ID=cds-EIE29159.1;Parent=gene-HP17_01970;Dbxref=NCBI_GP:EIE29159.1;Name=EIE29159.1;Note=COG0671 Membrane-associated phospholipid phosphatase;gbkey=CDS;locus_tag=HP17_01970;product=Hypothetical protein;protein_id=EIE29159.1;transl_table=11 AIHX01000093.1 Genbank gene 843 2546 . + . ID=gene-HP17_01975;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=HP17_01975 AIHX01000093.1 Genbank CDS 843 2546 . + 0 ID=cds-EIE29160.1;Parent=gene-HP17_01975;Dbxref=NCBI_GP:EIE29160.1;Name=EIE29160.1;Note=COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein;gbkey=CDS;gene=fliF;locus_tag=HP17_01975;product=flagellar MS-ring protein;protein_id=EIE29160.1;transl_table=11 AIHX01000093.1 Genbank gene 2564 3595 . + . ID=gene-HP17_01980;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=HP17_01980 AIHX01000093.1 Genbank CDS 2564 3595 . + 0 ID=cds-EIE29161.1;Parent=gene-HP17_01980;Dbxref=NCBI_GP:EIE29161.1;Name=EIE29161.1;Note=COG1536 Flagellar motor switch protein;gbkey=CDS;gene=fliG;locus_tag=HP17_01980;product=flagellar motor switch protein G;protein_id=EIE29161.1;transl_table=11 AIHX01000093.1 Genbank gene 3582 4358 . + . ID=gene-HP17_01985;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=HP17_01985 AIHX01000093.1 Genbank CDS 3582 4358 . + 0 ID=cds-EIE29162.1;Parent=gene-HP17_01985;Dbxref=NCBI_GP:EIE29162.1;Name=EIE29162.1;Note=COG1317 Flagellar biosynthesis/type III secretory pathway protein;gbkey=CDS;gene=fliH;locus_tag=HP17_01985;product=flagellar assembly protein H;protein_id=EIE29162.1;transl_table=11 AIHX01000093.1 Genbank gene 4361 6211 . + . ID=gene-HP17_01990;Name=HP17_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01990 AIHX01000093.1 Genbank CDS 4361 6211 . + 0 ID=cds-EIE29163.1;Parent=gene-HP17_01990;Dbxref=NCBI_GP:EIE29163.1;Name=EIE29163.1;Note=COG1154 Deoxyxylulose-5-phosphate synthase;gbkey=CDS;locus_tag=HP17_01990;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=EIE29163.1;transl_table=11 AIHX01000093.1 Genbank gene 6226 8016 . + . ID=gene-HP17_01995;Name=HP17_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_01995 AIHX01000093.1 Genbank CDS 6226 8016 . + 0 ID=cds-EIE29164.1;Parent=gene-HP17_01995;Dbxref=NCBI_GP:EIE29164.1;Name=EIE29164.1;Note=COG0481 Membrane GTPase LepA;gbkey=CDS;locus_tag=HP17_01995;product=GTP-binding protein LepA;protein_id=EIE29164.1;transl_table=11 AIHX01000093.1 Genbank pseudogene 8031 8787 . + . ID=gene-HP17_01200;Name=HP17_01200;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_01200;pseudo=true AIHX01000093.1 Genbank sequence_feature 8031 8787 . + . ID=id-HP17_01200;Note=potential frameshift: common BLAST hit: gb|AAD07426.1|ref|NP_207154.1| Hypothetical protein;gbkey=misc_feature;locus_tag=HP17_01200;pseudo=true AIHX01000093.1 Genbank gene 9141 9743 . + . ID=gene-HP17_02010;Name=HP17_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02010 AIHX01000093.1 Genbank CDS 9141 9743 . + 0 ID=cds-EIE29165.1;Parent=gene-HP17_02010;Dbxref=NCBI_GP:EIE29165.1;Name=EIE29165.1;Note=COG2874 Predicted ATPases involved in biogenesis of archaeal flagella;gbkey=CDS;locus_tag=HP17_02010;product=Hypothetical protein;protein_id=EIE29165.1;transl_table=11 AIHX01000093.1 Genbank gene 9840 10289 . + . ID=gene-HP17_02015;Name=HP17_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02015 AIHX01000093.1 Genbank CDS 9840 10289 . + 0 ID=cds-EIE29166.1;Parent=gene-HP17_02015;Dbxref=NCBI_GP:EIE29166.1;Name=EIE29166.1;gbkey=CDS;locus_tag=HP17_02015;product=Hypothetical protein;protein_id=EIE29166.1;transl_table=11 AIHX01000093.1 Genbank gene 10289 11176 . + . ID=gene-HP17_02020;Name=HP17_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02020 AIHX01000093.1 Genbank CDS 10289 11176 . + 0 ID=cds-EIE29167.1;Parent=gene-HP17_02020;Dbxref=NCBI_GP:EIE29167.1;Name=EIE29167.1;Note=COG1131 ABC-type multidrug transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_02020;product=Hypothetical protein;protein_id=EIE29167.1;transl_table=11 AIHX01000093.1 Genbank gene 11448 12257 . - . ID=gene-HP17_02025;Name=HP17_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02025 AIHX01000093.1 Genbank CDS 11448 12257 . - 0 ID=cds-EIE29168.1;Parent=gene-HP17_02025;Dbxref=NCBI_GP:EIE29168.1;Name=EIE29168.1;Note=COG4786 Flagellar basal body rod protein;gbkey=CDS;locus_tag=HP17_02025;product=flagellar basal-body rod protein;protein_id=EIE29168.1;transl_table=11 AIHX01000093.1 Genbank gene 12311 13597 . - . ID=gene-HP17_02030;Name=HP17_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02030 AIHX01000093.1 Genbank CDS 12311 13597 . - 0 ID=cds-EIE29169.1;Parent=gene-HP17_02030;Dbxref=NCBI_GP:EIE29169.1;Name=EIE29169.1;Note=COG0477 Permeases of the major facilitator superfamily;gbkey=CDS;locus_tag=HP17_02030;product=Putative alpha-ketoglutarate permease;protein_id=EIE29169.1;transl_table=11 AIHX01000093.1 Genbank gene 13675 13779 . - . ID=gene-HP17_02035;Name=HP17_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02035 AIHX01000093.1 Genbank CDS 13675 13779 . - 0 ID=cds-EIE29170.1;Parent=gene-HP17_02035;Dbxref=NCBI_GP:EIE29170.1;Name=EIE29170.1;gbkey=CDS;locus_tag=HP17_02035;product=Hypothetical protein;protein_id=EIE29170.1;transl_table=11 AIHX01000093.1 Genbank gene 13857 16406 . - . ID=gene-HP17_02040;Name=HP17_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02040 AIHX01000093.1 Genbank CDS 13857 16406 . - 0 ID=cds-EIE29171.1;Parent=gene-HP17_02040;Dbxref=NCBI_GP:EIE29171.1;Name=EIE29171.1;Note=COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins;gbkey=CDS;locus_tag=HP17_02040;product=cell division protein;protein_id=EIE29171.1;transl_table=11 AIHX01000093.1 Genbank gene 16403 18739 . - . ID=gene-HP17_02045;Name=HP17_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02045 AIHX01000093.1 Genbank CDS 16403 18739 . - 0 ID=cds-EIE29172.1;Parent=gene-HP17_02045;Dbxref=NCBI_GP:EIE29172.1;Name=EIE29172.1;Note=COG3893 Inactivated superfamily I helicase;gbkey=CDS;locus_tag=HP17_02045;product=Hypothetical protein;protein_id=EIE29172.1;transl_table=11 AIHX01000093.1 Genbank gene 18736 20270 . - . ID=gene-HP17_02050;Name=HP17_02050;end_range=20270,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02050;partial=true AIHX01000093.1 Genbank CDS 18736 20270 . - 2 ID=cds-EIE29173.1;Parent=gene-HP17_02050;Dbxref=NCBI_GP:EIE29173.1;Name=EIE29173.1;Note=COG0021 Transketolase;end_range=20270,.;gbkey=CDS;locus_tag=HP17_02050;partial=true;product=transketolase;protein_id=EIE29173.1;transl_table=11 ##sequence-region AIHX01000094.1 1 16093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000094.1 Genbank region 1 16093 . + . ID=AIHX01000094.1:1..16093;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000094.1 Genbank gene 1 373 . - . ID=gene-HP17_02055;Name=HP17_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02055;partial=true;start_range=.,1 AIHX01000094.1 Genbank CDS 1 373 . - 0 ID=cds-EIE29140.1;Parent=gene-HP17_02055;Dbxref=NCBI_GP:EIE29140.1;Name=EIE29140.1;Note=COG0021 Transketolase;gbkey=CDS;locus_tag=HP17_02055;partial=true;product=transketolase;protein_id=EIE29140.1;start_range=.,1;transl_table=11 AIHX01000094.1 Genbank gene 420 1262 . - . ID=gene-HP17_02060;Name=HP17_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02060 AIHX01000094.1 Genbank CDS 420 1262 . - 0 ID=cds-EIE29141.1;Parent=gene-HP17_02060;Dbxref=NCBI_GP:EIE29141.1;Name=EIE29141.1;Note=COG0196 FAD synthase;gbkey=CDS;locus_tag=HP17_02060;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=EIE29141.1;transl_table=11 AIHX01000094.1 Genbank gene 1228 1935 . - . ID=gene-HP17_02065;Name=HP17_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02065 AIHX01000094.1 Genbank CDS 1228 1935 . - 0 ID=cds-EIE29142.1;Parent=gene-HP17_02065;Dbxref=NCBI_GP:EIE29142.1;Name=EIE29142.1;Note=COG1189 Predicted rRNA methylase;gbkey=CDS;locus_tag=HP17_02065;product=Pore-forming cytolysin;protein_id=EIE29142.1;transl_table=11 AIHX01000094.1 Genbank gene 1935 2450 . - . ID=gene-HP17_02070;Name=HP17_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02070 AIHX01000094.1 Genbank CDS 1935 2450 . - 0 ID=cds-EIE29143.1;Parent=gene-HP17_02070;Dbxref=NCBI_GP:EIE29143.1;Name=EIE29143.1;gbkey=CDS;locus_tag=HP17_02070;product=Hypothetical protein;protein_id=EIE29143.1;transl_table=11 AIHX01000094.1 Genbank gene 2517 3440 . + . ID=gene-HP17_02075;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=HP17_02075 AIHX01000094.1 Genbank CDS 2517 3440 . + 0 ID=cds-EIE29144.1;Parent=gene-HP17_02075;Dbxref=NCBI_GP:EIE29144.1;Name=EIE29144.1;Note=COG0540 Aspartate carbamoyltransferase%2C catalytic chain;gbkey=CDS;gene=pyrB;locus_tag=HP17_02075;product=aspartate carbamoyltransferase catalytic subunit;protein_id=EIE29144.1;transl_table=11 AIHX01000094.1 Genbank gene 3721 5160 . + . ID=gene-HP17_02080;Name=HP17_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02080 AIHX01000094.1 Genbank CDS 3721 5160 . + 0 ID=cds-EIE29145.1;Parent=gene-HP17_02080;Dbxref=NCBI_GP:EIE29145.1;Name=EIE29145.1;gbkey=CDS;locus_tag=HP17_02080;product=outer membrane protein HofB;protein_id=EIE29145.1;transl_table=11 AIHX01000094.1 Genbank gene 5251 6906 . + . ID=gene-HP17_02085;Name=HP17_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02085 AIHX01000094.1 Genbank CDS 5251 6906 . + 0 ID=cds-EIE29146.1;Parent=gene-HP17_02085;Dbxref=NCBI_GP:EIE29146.1;Name=EIE29146.1;Note=COG1132 ABC-type multidrug transport system%2C ATPase and permease components;gbkey=CDS;locus_tag=HP17_02085;product=lipid A and glycerophospholipid transporter;protein_id=EIE29146.1;transl_table=11 AIHX01000094.1 Genbank gene 6900 7523 . + . ID=gene-HP17_02090;Name=HP17_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02090 AIHX01000094.1 Genbank CDS 6900 7523 . + 0 ID=cds-EIE29147.1;Parent=gene-HP17_02090;Dbxref=NCBI_GP:EIE29147.1;Name=EIE29147.1;gbkey=CDS;locus_tag=HP17_02090;product=Hypothetical protein;protein_id=EIE29147.1;transl_table=11 AIHX01000094.1 Genbank gene 7527 8105 . + . ID=gene-HP17_02095;Name=HP17_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02095 AIHX01000094.1 Genbank CDS 7527 8105 . + 0 ID=cds-EIE29148.1;Parent=gene-HP17_02095;Dbxref=NCBI_GP:EIE29148.1;Name=EIE29148.1;Note=COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes;gbkey=CDS;locus_tag=HP17_02095;product=Putative endonuclease;protein_id=EIE29148.1;transl_table=11 AIHX01000094.1 Genbank gene 8221 9216 . + . ID=gene-HP17_02100;Name=HP17_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02100 AIHX01000094.1 Genbank CDS 8221 9216 . + 0 ID=cds-EIE29149.1;Parent=gene-HP17_02100;Dbxref=NCBI_GP:EIE29149.1;Name=EIE29149.1;Note=COG3376 High-affinity nickel permease;gbkey=CDS;locus_tag=HP17_02100;product=high-affinity nickel-transport protein;protein_id=EIE29149.1;transl_table=11 AIHX01000094.1 Genbank gene 9220 9741 . - . ID=gene-HP17_02105;Name=HP17_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02105 AIHX01000094.1 Genbank CDS 9220 9741 . - 0 ID=cds-EIE29150.1;Parent=gene-HP17_02105;Dbxref=NCBI_GP:EIE29150.1;Name=EIE29150.1;gbkey=CDS;locus_tag=HP17_02105;product=Hypothetical protein;protein_id=EIE29150.1;transl_table=11 AIHX01000094.1 Genbank gene 9877 11193 . + . ID=gene-HP17_02110;Name=HP17_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02110 AIHX01000094.1 Genbank CDS 9877 11193 . + 0 ID=cds-EIE29151.1;Parent=gene-HP17_02110;Dbxref=NCBI_GP:EIE29151.1;Name=EIE29151.1;gbkey=CDS;locus_tag=HP17_02110;product=Hypothetical protein;protein_id=EIE29151.1;transl_table=11 AIHX01000094.1 Genbank gene 11410 11571 . + . ID=gene-HP17_02115;Name=HP17_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02115 AIHX01000094.1 Genbank CDS 11410 11571 . + 0 ID=cds-EIE29152.1;Parent=gene-HP17_02115;Dbxref=NCBI_GP:EIE29152.1;Name=EIE29152.1;gbkey=CDS;locus_tag=HP17_02115;product=Hypothetical protein;protein_id=EIE29152.1;transl_table=11 AIHX01000094.1 Genbank gene 11843 12043 . - . ID=gene-HP17_02120;Name=HP17_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02120 AIHX01000094.1 Genbank CDS 11843 12043 . - 0 ID=cds-EIE29153.1;Parent=gene-HP17_02120;Dbxref=NCBI_GP:EIE29153.1;Name=EIE29153.1;Note=COG2608 Copper chaperone;gbkey=CDS;locus_tag=HP17_02120;product=copper ion binding protein;protein_id=EIE29153.1;transl_table=11 AIHX01000094.1 Genbank gene 12044 14281 . - . ID=gene-HP17_02125;Name=HP17_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02125 AIHX01000094.1 Genbank CDS 12044 14281 . - 0 ID=cds-EIE29154.1;Parent=gene-HP17_02125;Dbxref=NCBI_GP:EIE29154.1;Name=EIE29154.1;Note=COG2217 Cation transport ATPase;gbkey=CDS;locus_tag=HP17_02125;product=copper-transporting ATPase;protein_id=EIE29154.1;transl_table=11 AIHX01000094.1 Genbank gene 14278 14991 . - . ID=gene-HP17_02130;Name=HP17_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02130 AIHX01000094.1 Genbank CDS 14278 14991 . - 0 ID=cds-EIE29155.1;Parent=gene-HP17_02130;Dbxref=NCBI_GP:EIE29155.1;Name=EIE29155.1;Note=COG1183 Phosphatidylserine synthase;gbkey=CDS;locus_tag=HP17_02130;product=Phosphatidylserine synthase;protein_id=EIE29155.1;transl_table=11 AIHX01000094.1 Genbank gene 14981 15235 . - . ID=gene-HP17_02135;Name=HP17_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02135 AIHX01000094.1 Genbank CDS 14981 15235 . - 0 ID=cds-EIE29156.1;Parent=gene-HP17_02135;Dbxref=NCBI_GP:EIE29156.1;Name=EIE29156.1;gbkey=CDS;locus_tag=HP17_02135;product=Hypothetical protein;protein_id=EIE29156.1;transl_table=11 AIHX01000094.1 Genbank gene 15238 16093 . - . ID=gene-HP17_02140;Name=HP17_02140;end_range=16093,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02140;partial=true AIHX01000094.1 Genbank CDS 15238 16093 . - 1 ID=cds-EIE29157.1;Parent=gene-HP17_02140;Dbxref=NCBI_GP:EIE29157.1;Name=EIE29157.1;Note=COG0465 ATP-dependent Zn proteases;end_range=16093,.;gbkey=CDS;locus_tag=HP17_02140;partial=true;product=cell division protein;protein_id=EIE29157.1;transl_table=11 ##sequence-region AIHX01000095.1 1 18134 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000095.1 Genbank region 1 18134 . + . ID=AIHX01000095.1:1..18134;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000095.1 Genbank gene 1 1027 . - . ID=gene-HP17_02145;Name=HP17_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02145;partial=true;start_range=.,1 AIHX01000095.1 Genbank CDS 1 1027 . - 0 ID=cds-EIE29107.1;Parent=gene-HP17_02145;Dbxref=NCBI_GP:EIE29107.1;Name=EIE29107.1;Note=COG0465 ATP-dependent Zn proteases;gbkey=CDS;locus_tag=HP17_02145;partial=true;product=cell division protein FtsH;protein_id=EIE29107.1;start_range=.,1;transl_table=11 AIHX01000095.1 Genbank gene 1036 2037 . - . ID=gene-HP17_02150;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=HP17_02150 AIHX01000095.1 Genbank CDS 1036 2037 . - 0 ID=cds-EIE29108.1;Parent=gene-HP17_02150;Dbxref=NCBI_GP:EIE29108.1;Name=EIE29108.1;Note=COG2264 Ribosomal protein L11 methylase;gbkey=CDS;gene=prmA;locus_tag=HP17_02150;product=ribosomal protein L11 methyltransferase;protein_id=EIE29108.1;transl_table=11 AIHX01000095.1 Genbank gene 2038 2412 . - . ID=gene-HP17_02155;Name=HP17_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02155 AIHX01000095.1 Genbank CDS 2038 2412 . - 0 ID=cds-EIE29109.1;Parent=gene-HP17_02155;Dbxref=NCBI_GP:EIE29109.1;Name=EIE29109.1;Note=COG0784 FOG: CheY-like receiver;gbkey=CDS;locus_tag=HP17_02155;product=Chemotactic response regulator%2C two-component system;protein_id=EIE29109.1;transl_table=11 AIHX01000095.1 Genbank gene 2702 3304 . + . ID=gene-HP17_02160;Name=HP17_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02160 AIHX01000095.1 Genbank CDS 2702 3304 . + 0 ID=cds-EIE29110.1;Parent=gene-HP17_02160;Dbxref=NCBI_GP:EIE29110.1;Name=EIE29110.1;gbkey=CDS;locus_tag=HP17_02160;product=outer membrane protein HorD;protein_id=EIE29110.1;transl_table=11 AIHX01000095.1 Genbank gene 3306 3393 . - . ID=gene-HP17_t02257;Name=HP17_t02257;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02257 AIHX01000095.1 Genbank tRNA 3306 3393 . - . ID=rna-HP17_t02257;Parent=gene-HP17_t02257;gbkey=tRNA;locus_tag=HP17_t02257;product=tRNA-Ser AIHX01000095.1 Genbank exon 3306 3393 . - . ID=exon-HP17_t02257-1;Parent=rna-HP17_t02257;gbkey=tRNA;locus_tag=HP17_t02257;product=tRNA-Ser AIHX01000095.1 Genbank gene 3436 3843 . - . ID=gene-HP17_02165;Name=HP17_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02165 AIHX01000095.1 Genbank CDS 3436 3843 . - 0 ID=cds-EIE29111.1;Parent=gene-HP17_02165;Dbxref=NCBI_GP:EIE29111.1;Name=EIE29111.1;gbkey=CDS;locus_tag=HP17_02165;product=Hypothetical protein;protein_id=EIE29111.1;transl_table=11 AIHX01000095.1 Genbank gene 3846 4088 . - . ID=gene-HP17_02170;Name=HP17_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02170 AIHX01000095.1 Genbank CDS 3846 4088 . - 0 ID=cds-EIE29112.1;Parent=gene-HP17_02170;Dbxref=NCBI_GP:EIE29112.1;Name=EIE29112.1;gbkey=CDS;locus_tag=HP17_02170;product=Hypothetical protein;protein_id=EIE29112.1;transl_table=11 AIHX01000095.1 Genbank gene 4082 4618 . - . ID=gene-HP17_02175;Name=gidB;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=HP17_02175 AIHX01000095.1 Genbank CDS 4082 4618 . - 0 ID=cds-EIE29113.1;Parent=gene-HP17_02175;Dbxref=NCBI_GP:EIE29113.1;Name=EIE29113.1;Note=COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division;gbkey=CDS;gene=gidB;locus_tag=HP17_02175;product=16S rRNA methyltransferase GidB;protein_id=EIE29113.1;transl_table=11 AIHX01000095.1 Genbank gene 4615 5652 . - . ID=gene-HP17_02180;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=HP17_02180 AIHX01000095.1 Genbank CDS 4615 5652 . - 0 ID=cds-EIE29114.1;Parent=gene-HP17_02180;Dbxref=NCBI_GP:EIE29114.1;Name=EIE29114.1;Note=COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase);gbkey=CDS;gene=queA;locus_tag=HP17_02180;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=EIE29114.1;transl_table=11 AIHX01000095.1 Genbank gene 5653 6375 . - . ID=gene-HP17_02185;Name=HP17_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02185 AIHX01000095.1 Genbank CDS 5653 6375 . - 0 ID=cds-EIE29115.1;Parent=gene-HP17_02185;Dbxref=NCBI_GP:EIE29115.1;Name=EIE29115.1;Note=COG0805 Sec-independent protein secretion pathway component TatC;gbkey=CDS;locus_tag=HP17_02185;product=Sec-independent protein translocase protein tatC-like protein;protein_id=EIE29115.1;transl_table=11 AIHX01000095.1 Genbank gene 6368 6835 . - . ID=gene-HP17_02190;Name=HP17_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02190 AIHX01000095.1 Genbank CDS 6368 6835 . - 0 ID=cds-EIE29116.1;Parent=gene-HP17_02190;Dbxref=NCBI_GP:EIE29116.1;Name=EIE29116.1;Note=COG1826 Sec-independent protein secretion pathway components;gbkey=CDS;locus_tag=HP17_02190;product=sec-independent translocase;protein_id=EIE29116.1;transl_table=11 AIHX01000095.1 Genbank gene 6903 7913 . - . ID=gene-HP17_02195;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=HP17_02195 AIHX01000095.1 Genbank CDS 6903 7913 . - 0 ID=cds-EIE29117.1;Parent=gene-HP17_02195;Dbxref=NCBI_GP:EIE29117.1;Name=EIE29117.1;Note=COG2255 Holliday junction resolvasome%2C helicase subunit;gbkey=CDS;gene=ruvB;locus_tag=HP17_02195;product=Holliday junction DNA helicase RuvB;protein_id=EIE29117.1;transl_table=11 AIHX01000095.1 Genbank gene 7914 8726 . - . ID=gene-HP17_02200;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HP17_02200 AIHX01000095.1 Genbank CDS 7914 8726 . - 0 ID=cds-EIE29118.1;Parent=gene-HP17_02200;Dbxref=NCBI_GP:EIE29118.1;Name=EIE29118.1;Note=COG0413 Ketopantoate hydroxymethyltransferase;gbkey=CDS;gene=panB;locus_tag=HP17_02200;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=EIE29118.1;transl_table=11 AIHX01000095.1 Genbank gene 8875 9597 . + . ID=gene-HP17_02205;Name=HP17_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02205 AIHX01000095.1 Genbank CDS 8875 9597 . + 0 ID=cds-EIE29119.1;Parent=gene-HP17_02205;Dbxref=NCBI_GP:EIE29119.1;Name=EIE29119.1;gbkey=CDS;locus_tag=HP17_02205;product=Hypothetical protein;protein_id=EIE29119.1;transl_table=11 AIHX01000095.1 Genbank gene 9587 10429 . + . ID=gene-HP17_02210;Name=HP17_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02210 AIHX01000095.1 Genbank CDS 9587 10429 . + 0 ID=cds-EIE29120.1;Parent=gene-HP17_02210;Dbxref=NCBI_GP:EIE29120.1;Name=EIE29120.1;Note=COG1132 ABC-type multidrug transport system%2C ATPase and permease components;gbkey=CDS;locus_tag=HP17_02210;product=Hypothetical protein;protein_id=EIE29120.1;transl_table=11 AIHX01000095.1 Genbank gene 10441 11382 . + . ID=gene-HP17_02215;Name=HP17_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02215 AIHX01000095.1 Genbank CDS 10441 11382 . + 0 ID=cds-EIE29121.1;Parent=gene-HP17_02215;Dbxref=NCBI_GP:EIE29121.1;Name=EIE29121.1;gbkey=CDS;locus_tag=HP17_02215;product=Hypothetical protein;protein_id=EIE29121.1;transl_table=11 AIHX01000095.1 Genbank gene 11392 12714 . + . ID=gene-HP17_02220;Name=HP17_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02220 AIHX01000095.1 Genbank CDS 11392 12714 . + 0 ID=cds-EIE29122.1;Parent=gene-HP17_02220;Dbxref=NCBI_GP:EIE29122.1;Name=EIE29122.1;Note=COG0739 Membrane proteins related to metalloendopeptidases;gbkey=CDS;locus_tag=HP17_02220;product=Hypothetical protein;protein_id=EIE29122.1;transl_table=11 AIHX01000095.1 Genbank gene 12717 13304 . + . ID=gene-HP17_02225;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=HP17_02225 AIHX01000095.1 Genbank CDS 12717 13304 . + 0 ID=cds-EIE29123.1;Parent=gene-HP17_02225;Dbxref=NCBI_GP:EIE29123.1;Name=EIE29123.1;Note=COG0850 Septum formation inhibitor;gbkey=CDS;gene=minC;locus_tag=HP17_02225;product=septum formation inhibitor;protein_id=EIE29123.1;transl_table=11 AIHX01000095.1 Genbank gene 13301 14188 . + . ID=gene-HP17_02230;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=HP17_02230 AIHX01000095.1 Genbank CDS 13301 14188 . + 0 ID=cds-EIE29124.1;Parent=gene-HP17_02230;Dbxref=NCBI_GP:EIE29124.1;Name=EIE29124.1;Note=COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase;gbkey=CDS;gene=lpxC;locus_tag=HP17_02230;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=EIE29124.1;transl_table=11 AIHX01000095.1 Genbank gene 14210 14683 . + . ID=gene-HP17_02235;Name=HP17_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02235 AIHX01000095.1 Genbank CDS 14210 14683 . + 0 ID=cds-EIE29125.1;Parent=gene-HP17_02235;Dbxref=NCBI_GP:EIE29125.1;Name=EIE29125.1;Note=COG1214 Inactive homolog of metal-dependent proteases%2C putative molecular chaperone;gbkey=CDS;locus_tag=HP17_02235;product=Hypothetical protein;protein_id=EIE29125.1;transl_table=11 AIHX01000095.1 Genbank gene 14737 15618 . + . ID=gene-HP17_02240;Name=HP17_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02240 AIHX01000095.1 Genbank CDS 14737 15618 . + 0 ID=cds-EIE29126.1;Parent=gene-HP17_02240;Dbxref=NCBI_GP:EIE29126.1;Name=EIE29126.1;Note=COG0083 Homoserine kinase;gbkey=CDS;locus_tag=HP17_02240;product=homoserine kinase;protein_id=EIE29126.1;transl_table=11 AIHX01000095.1 Genbank gene 15605 15859 . + . ID=gene-HP17_02245;Name=HP17_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02245 AIHX01000095.1 Genbank CDS 15605 15859 . + 0 ID=cds-EIE29127.1;Parent=gene-HP17_02245;Dbxref=NCBI_GP:EIE29127.1;Name=EIE29127.1;Note=COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination;gbkey=CDS;locus_tag=HP17_02245;product=Hypothetical protein;protein_id=EIE29127.1;transl_table=11 AIHX01000095.1 Genbank gene 15856 18134 . + . ID=gene-HP17_02250;Name=infB;end_range=18134,.;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=HP17_02250;partial=true AIHX01000095.1 Genbank CDS 15856 18134 . + 0 ID=cds-EIE29128.1;Parent=gene-HP17_02250;Dbxref=NCBI_GP:EIE29128.1;Name=EIE29128.1;Note=COG0532 Translation initiation factor 2 (IF-2%3B GTPase);end_range=18134,.;gbkey=CDS;gene=infB;locus_tag=HP17_02250;partial=true;product=translation initiation factor IF-2;protein_id=EIE29128.1;transl_table=11 ##sequence-region AIHX01000096.1 1 30113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000096.1 Genbank region 1 30113 . + . ID=AIHX01000096.1:1..30113;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000096.1 Genbank gene 2 553 . + . ID=gene-HP17_02257;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=HP17_02257 AIHX01000096.1 Genbank CDS 2 553 . + 0 ID=cds-EIE29064.1;Parent=gene-HP17_02257;Dbxref=NCBI_GP:EIE29064.1;Name=EIE29064.1;Note=COG0532 Translation initiation factor 2 (IF-2%3B GTPase);gbkey=CDS;gene=infB;locus_tag=HP17_02257;product=translation initiation factor IF-2;protein_id=EIE29064.1;transl_table=11 AIHX01000096.1 Genbank gene 553 888 . + . ID=gene-HP17_02262;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=HP17_02262 AIHX01000096.1 Genbank CDS 553 888 . + 0 ID=cds-EIE29065.1;Parent=gene-HP17_02262;Dbxref=NCBI_GP:EIE29065.1;Name=EIE29065.1;Note=COG0858 Ribosome-binding factor A;gbkey=CDS;gene=rbfA;locus_tag=HP17_02262;product=ribosome-binding factor A;protein_id=EIE29065.1;transl_table=11 AIHX01000096.1 Genbank gene 881 1321 . + . ID=gene-HP17_02267;Name=HP17_02267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02267 AIHX01000096.1 Genbank CDS 881 1321 . + 0 ID=cds-EIE29066.1;Parent=gene-HP17_02267;Dbxref=NCBI_GP:EIE29066.1;Name=EIE29066.1;Note=COG0779 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_02267;product=Ribosome maturation factor rimP;protein_id=EIE29066.1;transl_table=11 AIHX01000096.1 Genbank gene 1430 3418 . - . ID=gene-HP17_02272;Name=HP17_02272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02272 AIHX01000096.1 Genbank CDS 1430 3418 . - 0 ID=cds-EIE29067.1;Parent=gene-HP17_02272;Dbxref=NCBI_GP:EIE29067.1;Name=EIE29067.1;Note=COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases;gbkey=CDS;locus_tag=HP17_02272;product=acetyl-CoA synthetase;protein_id=EIE29067.1;transl_table=11 AIHX01000096.1 Genbank gene 3616 4728 . + . ID=gene-HP17_02277;Name=HP17_02277;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02277 AIHX01000096.1 Genbank CDS 3616 4728 . + 0 ID=cds-EIE29068.1;Parent=gene-HP17_02277;Dbxref=NCBI_GP:EIE29068.1;Name=EIE29068.1;Note=COG1408 Predicted phosphohydrolases;gbkey=CDS;locus_tag=HP17_02277;product=phosphodiesterase domain-containing protein;protein_id=EIE29068.1;transl_table=11 AIHX01000096.1 Genbank gene 5106 5777 . + . ID=gene-HP17_02282;Name=HP17_02282;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02282 AIHX01000096.1 Genbank CDS 5106 5777 . + 0 ID=cds-EIE29069.1;Parent=gene-HP17_02282;Dbxref=NCBI_GP:EIE29069.1;Name=EIE29069.1;Note=COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain;gbkey=CDS;locus_tag=HP17_02282;product=transcriptional regulator;protein_id=EIE29069.1;transl_table=11 AIHX01000096.1 Genbank gene 5888 6082 . + . ID=gene-HP17_02287;Name=HP17_02287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02287 AIHX01000096.1 Genbank CDS 5888 6082 . + 0 ID=cds-EIE29070.1;Parent=gene-HP17_02287;Dbxref=NCBI_GP:EIE29070.1;Name=EIE29070.1;gbkey=CDS;locus_tag=HP17_02287;product=Hypothetical protein;protein_id=EIE29070.1;transl_table=11 AIHX01000096.1 Genbank gene 6571 7614 . - . ID=gene-HP17_02292;Name=HP17_02292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02292 AIHX01000096.1 Genbank CDS 6571 7614 . - 0 ID=cds-EIE29071.1;Parent=gene-HP17_02292;Dbxref=NCBI_GP:EIE29071.1;Name=EIE29071.1;Note=COG2404 Predicted phosphohydrolase (DHH superfamily);gbkey=CDS;locus_tag=HP17_02292;product=Hypothetical protein;protein_id=EIE29071.1;transl_table=11 AIHX01000096.1 Genbank gene 7645 9846 . - . ID=gene-HP17_02297;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=HP17_02297 AIHX01000096.1 Genbank CDS 7645 9846 . - 0 ID=cds-EIE29072.1;Parent=gene-HP17_02297;Dbxref=NCBI_GP:EIE29072.1;Name=EIE29072.1;Note=COG1298 Flagellar biosynthesis pathway%2C component FlhA;gbkey=CDS;gene=flhA;locus_tag=HP17_02297;product=flagellar biosynthesis protein FlhA;protein_id=EIE29072.1;transl_table=11 AIHX01000096.1 Genbank gene 9982 10254 . + . ID=gene-HP17_02302;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=HP17_02302 AIHX01000096.1 Genbank CDS 9982 10254 . + 0 ID=cds-EIE29073.1;Parent=gene-HP17_02302;Dbxref=NCBI_GP:EIE29073.1;Name=EIE29073.1;Note=COG0184 Ribosomal protein S15P/S13E;gbkey=CDS;gene=rpsO;locus_tag=HP17_02302;product=30S ribosomal protein S15;protein_id=EIE29073.1;transl_table=11 AIHX01000096.1 Genbank gene 10284 11573 . + . ID=gene-HP17_02307;Name=HP17_02307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02307 AIHX01000096.1 Genbank CDS 10284 11573 . + 0 ID=cds-EIE29074.1;Parent=gene-HP17_02307;Dbxref=NCBI_GP:EIE29074.1;Name=EIE29074.1;Note=COG3307 Lipid A core - O-antigen ligase and related enzymes;gbkey=CDS;locus_tag=HP17_02307;product=Hypothetical protein;protein_id=EIE29074.1;transl_table=11 AIHX01000096.1 Genbank gene 11702 12205 . + . ID=gene-HP17_02312;Name=HP17_02312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02312 AIHX01000096.1 Genbank CDS 11702 12205 . + 0 ID=cds-EIE29075.1;Parent=gene-HP17_02312;Dbxref=NCBI_GP:EIE29075.1;Name=EIE29075.1;Note=COG0757 3-dehydroquinate dehydratase II;gbkey=CDS;locus_tag=HP17_02312;product=3-dehydroquinate dehydratase;protein_id=EIE29075.1;transl_table=11 AIHX01000096.1 Genbank gene 12219 13292 . + . ID=gene-HP17_02317;Name=HP17_02317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02317 AIHX01000096.1 Genbank CDS 12219 13292 . + 0 ID=cds-EIE29076.1;Parent=gene-HP17_02317;Dbxref=NCBI_GP:EIE29076.1;Name=EIE29076.1;Note=COG0006 Xaa-Pro aminopeptidase;gbkey=CDS;locus_tag=HP17_02317;product=X-Pro aminopeptidase;protein_id=EIE29076.1;transl_table=11 AIHX01000096.1 Genbank gene 13289 13780 . + . ID=gene-HP17_02322;Name=HP17_02322;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02322 AIHX01000096.1 Genbank CDS 13289 13780 . + 0 ID=cds-EIE29077.1;Parent=gene-HP17_02322;Dbxref=NCBI_GP:EIE29077.1;Name=EIE29077.1;Note=COG0801 7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase;gbkey=CDS;locus_tag=HP17_02322;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=EIE29077.1;transl_table=11 AIHX01000096.1 Genbank gene 13777 15153 . + . ID=gene-HP17_02327;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=HP17_02327 AIHX01000096.1 Genbank CDS 13777 15153 . + 0 ID=cds-EIE29078.1;Parent=gene-HP17_02327;Dbxref=NCBI_GP:EIE29078.1;Name=EIE29078.1;Note=COG1419 Flagellar GTP-binding protein;gbkey=CDS;gene=flhF;locus_tag=HP17_02327;product=flagellar biosynthesis regulator FlhF;protein_id=EIE29078.1;transl_table=11 AIHX01000096.1 Genbank gene 15150 16034 . + . ID=gene-HP17_02332;Name=HP17_02332;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02332 AIHX01000096.1 Genbank CDS 15150 16034 . + 0 ID=cds-EIE29079.1;Parent=gene-HP17_02332;Dbxref=NCBI_GP:EIE29079.1;Name=EIE29079.1;Note=COG0455 ATPases involved in chromosome partitioning;gbkey=CDS;locus_tag=HP17_02332;product=flagellar biosynthesis protein FlhG;protein_id=EIE29079.1;transl_table=11 AIHX01000096.1 Genbank gene 16039 16353 . + . ID=gene-HP17_02337;Name=HP17_02337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02337 AIHX01000096.1 Genbank CDS 16039 16353 . + 0 ID=cds-EIE29080.1;Parent=gene-HP17_02337;Dbxref=NCBI_GP:EIE29080.1;Name=EIE29080.1;gbkey=CDS;locus_tag=HP17_02337;product=Hypothetical protein;protein_id=EIE29080.1;transl_table=11 AIHX01000096.1 Genbank gene 16331 17098 . + . ID=gene-HP17_02342;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=HP17_02342 AIHX01000096.1 Genbank CDS 16331 17098 . + 0 ID=cds-EIE29081.1;Parent=gene-HP17_02342;Dbxref=NCBI_GP:EIE29081.1;Name=EIE29081.1;Note=COG1191 DNA-directed RNA polymerase specialized sigma subunit;gbkey=CDS;gene=fliA;locus_tag=HP17_02342;product=flagellar biosynthesis sigma factor;protein_id=EIE29081.1;transl_table=11 AIHX01000096.1 Genbank gene 17091 18155 . + . ID=gene-HP17_02347;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=HP17_02347 AIHX01000096.1 Genbank CDS 17091 18155 . + 0 ID=cds-EIE29082.1;Parent=gene-HP17_02347;Dbxref=NCBI_GP:EIE29082.1;Name=EIE29082.1;Note=COG1868 Flagellar motor switch protein;gbkey=CDS;gene=fliM;locus_tag=HP17_02347;product=flagellar motor switch protein FliM;protein_id=EIE29082.1;transl_table=11 AIHX01000096.1 Genbank gene 18159 19022 . + . ID=gene-HP17_02352;Name=HP17_02352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02352 AIHX01000096.1 Genbank CDS 18159 19022 . + 0 ID=cds-EIE29083.1;Parent=gene-HP17_02352;Dbxref=NCBI_GP:EIE29083.1;Name=EIE29083.1;Note=COG1776 Chemotaxis protein CheC%2C inhibitor of MCP methylation;gbkey=CDS;locus_tag=HP17_02352;product=flagellar motor switch protein FliY;protein_id=EIE29083.1;transl_table=11 AIHX01000096.1 Genbank gene 19049 19585 . + . ID=gene-HP17_02357;Name=HP17_02357;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02357 AIHX01000096.1 Genbank CDS 19049 19585 . + 0 ID=cds-EIE29084.1;Parent=gene-HP17_02357;Dbxref=NCBI_GP:EIE29084.1;Name=EIE29084.1;Note=COG2731 Beta-galactosidase%2C beta subunit;gbkey=CDS;locus_tag=HP17_02357;product=Hypothetical protein;protein_id=EIE29084.1;transl_table=11 AIHX01000096.1 Genbank gene 19582 20079 . + . ID=gene-HP17_02362;Name=HP17_02362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02362 AIHX01000096.1 Genbank CDS 19582 20079 . + 0 ID=cds-EIE29085.1;Parent=gene-HP17_02362;Dbxref=NCBI_GP:EIE29085.1;Name=EIE29085.1;Note=COG4731 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_02362;product=Hypothetical protein;protein_id=EIE29085.1;transl_table=11 AIHX01000096.1 Genbank gene 20100 20552 . - . ID=gene-HP17_02367;Name=HP17_02367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02367 AIHX01000096.1 Genbank CDS 20100 20552 . - 0 ID=cds-EIE29086.1;Parent=gene-HP17_02367;Dbxref=NCBI_GP:EIE29086.1;Name=EIE29086.1;Note=COG0735 Fe2+/Zn2+ uptake regulation proteins;gbkey=CDS;locus_tag=HP17_02367;product=ferric uptake regulation protein;protein_id=EIE29086.1;transl_table=11 AIHX01000096.1 Genbank gene 20712 21887 . - . ID=gene-HP17_02372;Name=HP17_02372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02372 AIHX01000096.1 Genbank CDS 20712 21887 . - 0 ID=cds-EIE29087.1;Parent=gene-HP17_02372;Dbxref=NCBI_GP:EIE29087.1;Name=EIE29087.1;Note=COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase;gbkey=CDS;locus_tag=HP17_02372;product=recombination factor protein RarA;protein_id=EIE29087.1;transl_table=11 AIHX01000096.1 Genbank gene 21884 22255 . - . ID=gene-HP17_02377;Name=HP17_02377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02377 AIHX01000096.1 Genbank CDS 21884 22255 . - 0 ID=cds-EIE29088.1;Parent=gene-HP17_02377;Dbxref=NCBI_GP:EIE29088.1;Name=EIE29088.1;Note=COG0789 Predicted transcriptional regulators;gbkey=CDS;locus_tag=HP17_02377;product=putative transcriptional regulator%2C MerR family protein;protein_id=EIE29088.1;transl_table=11 AIHX01000096.1 Genbank gene 22265 23131 . - . ID=gene-HP17_02382;Name=HP17_02382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02382 AIHX01000096.1 Genbank CDS 22265 23131 . - 0 ID=cds-EIE29089.1;Parent=gene-HP17_02382;Dbxref=NCBI_GP:EIE29089.1;Name=EIE29089.1;Note=COG2214 DnaJ-class molecular chaperone;gbkey=CDS;locus_tag=HP17_02382;product=co-chaperone-curved DNA binding protein A;protein_id=EIE29089.1;transl_table=11 AIHX01000096.1 Genbank gene 23299 24549 . + . ID=gene-HP17_02387;Name=HP17_02387;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02387 AIHX01000096.1 Genbank CDS 23299 24549 . + 0 ID=cds-EIE29090.1;Parent=gene-HP17_02387;Dbxref=NCBI_GP:EIE29090.1;Name=EIE29090.1;gbkey=CDS;locus_tag=HP17_02387;product=Hypothetical protein;protein_id=EIE29090.1;transl_table=11 AIHX01000096.1 Genbank gene 24658 25494 . - . ID=gene-HP17_02392;Name=HP17_02392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02392 AIHX01000096.1 Genbank CDS 24658 25494 . - 0 ID=cds-EIE29091.1;Parent=gene-HP17_02392;Dbxref=NCBI_GP:EIE29091.1;Name=EIE29091.1;Note=COG0258 5'-3' exonuclease (including N-terminal domain of PolI);gbkey=CDS;locus_tag=HP17_02392;product=5'-3' exonuclease;protein_id=EIE29091.1;transl_table=11 AIHX01000096.1 Genbank gene 25749 26645 . - . ID=gene-HP17_02397;Name=HP17_02397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02397 AIHX01000096.1 Genbank CDS 25749 26645 . - 0 ID=cds-EIE29092.1;Parent=gene-HP17_02397;Dbxref=NCBI_GP:EIE29092.1;Name=EIE29092.1;Note=COG0784 FOG: CheY-like receiver;gbkey=CDS;locus_tag=HP17_02397;product=response regulator;protein_id=EIE29092.1;transl_table=11 AIHX01000096.1 Genbank gene 26667 27887 . - . ID=gene-HP17_02402;Name=ispDF;gbkey=Gene;gene=ispDF;gene_biotype=protein_coding;locus_tag=HP17_02402 AIHX01000096.1 Genbank CDS 26667 27887 . - 0 ID=cds-EIE29093.1;Parent=gene-HP17_02402;Dbxref=NCBI_GP:EIE29093.1;Name=EIE29093.1;Note=COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase;gbkey=CDS;gene=ispDF;locus_tag=HP17_02402;product=bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase protein;protein_id=EIE29093.1;transl_table=11 AIHX01000096.1 Genbank gene 27909 29339 . - . ID=gene-HP17_02407;Name=HP17_02407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02407 AIHX01000096.1 Genbank CDS 27909 29339 . - 0 ID=cds-EIE29094.1;Parent=gene-HP17_02407;Dbxref=NCBI_GP:EIE29094.1;Name=EIE29094.1;Note=COG0265 Trypsin-like serine proteases%2C typically periplasmic%2C contain C-terminal PDZ domain;gbkey=CDS;locus_tag=HP17_02407;product=protease DO;protein_id=EIE29094.1;transl_table=11 AIHX01000096.1 Genbank gene 29383 30113 . - . ID=gene-HP17_02412;Name=HP17_02412;end_range=30113,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02412;partial=true AIHX01000096.1 Genbank CDS 29383 30113 . - 2 ID=cds-EIE29095.1;Parent=gene-HP17_02412;Dbxref=NCBI_GP:EIE29095.1;Name=EIE29095.1;Note=COG0833 Amino acid transporters;end_range=30113,.;gbkey=CDS;locus_tag=HP17_02412;partial=true;product=amino acid permease;protein_id=EIE29095.1;transl_table=11 ##sequence-region AIHX01000097.1 1 4297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000097.1 Genbank region 1 4297 . + . ID=AIHX01000097.1:1..4297;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000097.1 Genbank gene 1 681 . - . ID=gene-HP17_02417;Name=HP17_02417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02417;partial=true;start_range=.,1 AIHX01000097.1 Genbank CDS 1 681 . - 0 ID=cds-EIE29044.1;Parent=gene-HP17_02417;Dbxref=NCBI_GP:EIE29044.1;Name=EIE29044.1;Note=COG0833 Amino acid transporters;gbkey=CDS;locus_tag=HP17_02417;partial=true;product=amino acid permease;protein_id=EIE29044.1;start_range=.,1;transl_table=11 AIHX01000097.1 Genbank gene 896 1435 . - . ID=gene-HP17_02422;Name=HP17_02422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02422 AIHX01000097.1 Genbank CDS 896 1435 . - 0 ID=cds-EIE29045.1;Parent=gene-HP17_02422;Dbxref=NCBI_GP:EIE29045.1;Name=EIE29045.1;Note=COG0558 Phosphatidylglycerophosphate synthase;gbkey=CDS;locus_tag=HP17_02422;product=phosphatidylglycerophosphate synthase;protein_id=EIE29045.1;transl_table=11 AIHX01000097.1 Genbank gene 1432 2040 . - . ID=gene-HP17_02427;Name=HP17_02427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02427 AIHX01000097.1 Genbank CDS 1432 2040 . - 0 ID=cds-EIE29046.1;Parent=gene-HP17_02427;Dbxref=NCBI_GP:EIE29046.1;Name=EIE29046.1;gbkey=CDS;locus_tag=HP17_02427;product=Hypothetical protein;protein_id=EIE29046.1;transl_table=11 AIHX01000097.1 Genbank gene 2050 2838 . - . ID=gene-HP17_02432;Name=HP17_02432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02432 AIHX01000097.1 Genbank CDS 2050 2838 . - 0 ID=cds-EIE29047.1;Parent=gene-HP17_02432;Dbxref=NCBI_GP:EIE29047.1;Name=EIE29047.1;Note=COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases);gbkey=CDS;locus_tag=HP17_02432;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=EIE29047.1;transl_table=11 AIHX01000097.1 Genbank gene 2835 3737 . - . ID=gene-HP17_02437;Name=HP17_02437;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02437 AIHX01000097.1 Genbank CDS 2835 3737 . - 0 ID=cds-EIE29048.1;Parent=gene-HP17_02437;Dbxref=NCBI_GP:EIE29048.1;Name=EIE29048.1;Note=COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase;gbkey=CDS;locus_tag=HP17_02437;product=dihydrodipicolinate synthase;protein_id=EIE29048.1;transl_table=11 AIHX01000097.1 Genbank gene 3752 4297 . - . ID=gene-HP17_02442;Name=HP17_02442;end_range=4297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02442;partial=true AIHX01000097.1 Genbank CDS 3752 4297 . - 0 ID=cds-EIE29049.1;Parent=gene-HP17_02442;Dbxref=NCBI_GP:EIE29049.1;Name=EIE29049.1;Note=COG0612 Predicted Zn-dependent peptidases;end_range=4297,.;gbkey=CDS;locus_tag=HP17_02442;partial=true;product=protease (pqqE);protein_id=EIE29049.1;transl_table=11 ##sequence-region AIHX01000098.1 1 4271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000098.1 Genbank region 1 4271 . + . ID=AIHX01000098.1:1..4271;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000098.1 Genbank gene 1 784 . - . ID=gene-HP17_02447;Name=HP17_02447;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02447;partial=true;start_range=.,1 AIHX01000098.1 Genbank CDS 1 784 . - 0 ID=cds-EIE29040.1;Parent=gene-HP17_02447;Dbxref=NCBI_GP:EIE29040.1;Name=EIE29040.1;Note=COG0612 Predicted Zn-dependent peptidases;gbkey=CDS;locus_tag=HP17_02447;partial=true;product=putative zinc protease;protein_id=EIE29040.1;start_range=.,1;transl_table=11 AIHX01000098.1 Genbank gene 781 1836 . - . ID=gene-HP17_02452;Name=HP17_02452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02452 AIHX01000098.1 Genbank CDS 781 1836 . - 0 ID=cds-EIE29041.1;Parent=gene-HP17_02452;Dbxref=NCBI_GP:EIE29041.1;Name=EIE29041.1;Note=COG0167 Dihydroorotate dehydrogenase;gbkey=CDS;locus_tag=HP17_02452;product=dihydroorotate dehydrogenase 2;protein_id=EIE29041.1;transl_table=11 AIHX01000098.1 Genbank gene 1873 3900 . - . ID=gene-HP17_02457;Name=HP17_02457;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02457 AIHX01000098.1 Genbank CDS 1873 3900 . - 0 ID=cds-EIE29042.1;Parent=gene-HP17_02457;Dbxref=NCBI_GP:EIE29042.1;Name=EIE29042.1;Note=COG0855 Polyphosphate kinase;gbkey=CDS;locus_tag=HP17_02457;product=polyphosphate kinase;protein_id=EIE29042.1;transl_table=11 AIHX01000098.1 Genbank gene 3995 4072 . - . ID=gene-HP17_t02464;Name=HP17_t02464;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02464 AIHX01000098.1 Genbank tRNA 3995 4072 . - . ID=rna-HP17_t02464;Parent=gene-HP17_t02464;gbkey=tRNA;locus_tag=HP17_t02464;product=tRNA-Pro AIHX01000098.1 Genbank exon 3995 4072 . - . ID=exon-HP17_t02464-1;Parent=rna-HP17_t02464;gbkey=tRNA;locus_tag=HP17_t02464;product=tRNA-Pro ##sequence-region AIHX01000099.1 1 4587 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000099.1 Genbank region 1 4587 . + . ID=AIHX01000099.1:1..4587;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000099.1 Genbank gene 38 1231 . - . ID=gene-HP17_02464;Name=HP17_02464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02464 AIHX01000099.1 Genbank CDS 38 1231 . - 0 ID=cds-EIE29020.1;Parent=gene-HP17_02464;Dbxref=NCBI_GP:EIE29020.1;Name=EIE29020.1;Note=COG0732 Restriction endonuclease S subunits;gbkey=CDS;locus_tag=HP17_02464;product=type I restriction/modification specificity protein;protein_id=EIE29020.1;transl_table=11 AIHX01000099.1 Genbank gene 1224 2855 . - . ID=gene-HP17_02469;Name=HP17_02469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02469 AIHX01000099.1 Genbank CDS 1224 2855 . - 0 ID=cds-EIE29021.1;Parent=gene-HP17_02469;Dbxref=NCBI_GP:EIE29021.1;Name=EIE29021.1;Note=COG0286 Type I restriction-modification system methyltransferase subunit;gbkey=CDS;locus_tag=HP17_02469;product=type I restriction enzyme M protein;protein_id=EIE29021.1;transl_table=11 AIHX01000099.1 Genbank gene 2848 4485 . - . ID=gene-HP17_02474;Name=HP17_02474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02474 AIHX01000099.1 Genbank CDS 2848 4485 . - 0 ID=cds-EIE29022.1;Parent=gene-HP17_02474;Dbxref=NCBI_GP:EIE29022.1;Name=EIE29022.1;Note=COG0610 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases;gbkey=CDS;locus_tag=HP17_02474;product=type I restriction enzyme R protein;protein_id=EIE29022.1;transl_table=11 ##sequence-region AIHX01000100.1 1 22086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000100.1 Genbank region 1 22086 . + . ID=AIHX01000100.1:1..22086;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000100.1 Genbank gene 1 101 . - . ID=gene-HP17_00115;Name=HP17_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00115;partial=true;start_range=.,1 AIHX01000100.1 Genbank CDS 1 101 . - 0 ID=cds-EIE28972.1;Parent=gene-HP17_00115;Dbxref=NCBI_GP:EIE28972.1;Name=EIE28972.1;Note=COG0247 Fe-S oxidoreductase;gbkey=CDS;locus_tag=HP17_00115;partial=true;product=(S)-2-hydroxy-acid oxidase;protein_id=EIE28972.1;start_range=.,1;transl_table=11 AIHX01000100.1 Genbank gene 321 1970 . + . ID=gene-HP17_00120;Name=HP17_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00120 AIHX01000100.1 Genbank CDS 321 1970 . + 0 ID=cds-EIE28973.1;Parent=gene-HP17_00120;Dbxref=NCBI_GP:EIE28973.1;Name=EIE28973.1;Note=COG1620 L-lactate permease;gbkey=CDS;locus_tag=HP17_00120;product=L-lactate permease;protein_id=EIE28973.1;transl_table=11 AIHX01000100.1 Genbank gene 2026 3681 . + . ID=gene-HP17_00125;Name=HP17_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00125 AIHX01000100.1 Genbank CDS 2026 3681 . + 0 ID=cds-EIE28974.1;Parent=gene-HP17_00125;Dbxref=NCBI_GP:EIE28974.1;Name=EIE28974.1;Note=COG1620 L-lactate permease;gbkey=CDS;locus_tag=HP17_00125;product=L-lactate permease (lctP);protein_id=EIE28974.1;transl_table=11 AIHX01000100.1 Genbank gene 3705 4574 . - . ID=gene-HP17_00130;Name=HP17_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00130 AIHX01000100.1 Genbank CDS 3705 4574 . - 0 ID=cds-EIE28975.1;Parent=gene-HP17_00130;Dbxref=NCBI_GP:EIE28975.1;Name=EIE28975.1;Note=COG1194 A/G-specific DNA glycosylase;gbkey=CDS;locus_tag=HP17_00130;product=DNA glycosylase MutY;protein_id=EIE28975.1;transl_table=11 AIHX01000100.1 Genbank gene 4692 6140 . - . ID=gene-HP17_00135;Name=HP17_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00135 AIHX01000100.1 Genbank CDS 4692 6140 . - 0 ID=cds-EIE28976.1;Parent=gene-HP17_00135;Dbxref=NCBI_GP:EIE28976.1;Name=EIE28976.1;Note=COG0471 Di- and tricarboxylate transporters;gbkey=CDS;locus_tag=HP17_00135;product=sodium:sulfate symporter transmembrane region domain-containing protein;protein_id=EIE28976.1;transl_table=11 AIHX01000100.1 Genbank gene 6310 7776 . + . ID=gene-HP17_00140;Name=HP17_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00140 AIHX01000100.1 Genbank CDS 6310 7776 . + 0 ID=cds-EIE28977.1;Parent=gene-HP17_00140;Dbxref=NCBI_GP:EIE28977.1;Name=EIE28977.1;Note=COG3278 Cbb3-type cytochrome oxidase%2C subunit 1;gbkey=CDS;locus_tag=HP17_00140;product=cbb3-type cytochrome c oxidase subunit I;protein_id=EIE28977.1;transl_table=11 AIHX01000100.1 Genbank gene 7789 8487 . + . ID=gene-HP17_00145;Name=HP17_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00145 AIHX01000100.1 Genbank CDS 7789 8487 . + 0 ID=cds-EIE28978.1;Parent=gene-HP17_00145;Dbxref=NCBI_GP:EIE28978.1;Name=EIE28978.1;Note=COG2993 Cbb3-type cytochrome oxidase%2C cytochrome c subunit;gbkey=CDS;locus_tag=HP17_00145;product=cbb3-type cytochrome c oxidase subunit II;protein_id=EIE28978.1;transl_table=11 AIHX01000100.1 Genbank gene 8498 8716 . + . ID=gene-HP17_00150;Name=HP17_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00150 AIHX01000100.1 Genbank CDS 8498 8716 . + 0 ID=cds-EIE28979.1;Parent=gene-HP17_00150;Dbxref=NCBI_GP:EIE28979.1;Name=EIE28979.1;gbkey=CDS;locus_tag=HP17_00150;product=cytochrome c oxidase%2C cbb3-type%2C CcoQ subunit;protein_id=EIE28979.1;transl_table=11 AIHX01000100.1 Genbank gene 8718 9596 . + . ID=gene-HP17_00155;Name=HP17_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00155 AIHX01000100.1 Genbank CDS 8718 9596 . + 0 ID=cds-EIE28980.1;Parent=gene-HP17_00155;Dbxref=NCBI_GP:EIE28980.1;Name=EIE28980.1;Note=COG2010 Cytochrome c%2C mono- and diheme variants;gbkey=CDS;locus_tag=HP17_00155;product=cytochrome c oxidase%2C cbb3-type%2C subunit III;protein_id=EIE28980.1;transl_table=11 AIHX01000100.1 Genbank gene 9607 9813 . + . ID=gene-HP17_00160;Name=HP17_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00160 AIHX01000100.1 Genbank CDS 9607 9813 . + 0 ID=cds-EIE28981.1;Parent=gene-HP17_00160;Dbxref=NCBI_GP:EIE28981.1;Name=EIE28981.1;gbkey=CDS;locus_tag=HP17_00160;product=Hypothetical protein;protein_id=EIE28981.1;transl_table=11 AIHX01000100.1 Genbank gene 9810 9917 . + . ID=gene-HP17_00165;Name=HP17_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00165 AIHX01000100.1 Genbank CDS 9810 9917 . + 0 ID=cds-EIE28982.1;Parent=gene-HP17_00165;Dbxref=NCBI_GP:EIE28982.1;Name=EIE28982.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_00165;product=Hypothetical protein;protein_id=EIE28982.1;transl_table=11 AIHX01000100.1 Genbank gene 9953 10498 . + . ID=gene-HP17_00170;Name=HP17_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00170 AIHX01000100.1 Genbank CDS 9953 10498 . + 0 ID=cds-EIE28983.1;Parent=gene-HP17_00170;Dbxref=NCBI_GP:EIE28983.1;Name=EIE28983.1;Note=COG0443 Molecular chaperone;gbkey=CDS;locus_tag=HP17_00170;product=Hypothetical protein;protein_id=EIE28983.1;transl_table=11 AIHX01000100.1 Genbank gene 10511 11092 . + . ID=gene-HP17_00175;Name=HP17_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00175 AIHX01000100.1 Genbank CDS 10511 11092 . + 0 ID=cds-EIE28984.1;Parent=gene-HP17_00175;Dbxref=NCBI_GP:EIE28984.1;Name=EIE28984.1;gbkey=CDS;locus_tag=HP17_00175;product=Hypothetical protein;protein_id=EIE28984.1;transl_table=11 AIHX01000100.1 Genbank gene 11181 11948 . + . ID=gene-HP17_00180;Name=HP17_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00180 AIHX01000100.1 Genbank CDS 11181 11948 . + 0 ID=cds-EIE28985.1;Parent=gene-HP17_00180;Dbxref=NCBI_GP:EIE28985.1;Name=EIE28985.1;gbkey=CDS;locus_tag=HP17_00180;product=putative membrane protein;protein_id=EIE28985.1;transl_table=11 AIHX01000100.1 Genbank gene 11945 12808 . - . ID=gene-HP17_00185;Name=HP17_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00185 AIHX01000100.1 Genbank CDS 11945 12808 . - 0 ID=cds-EIE28986.1;Parent=gene-HP17_00185;Dbxref=NCBI_GP:EIE28986.1;Name=EIE28986.1;Note=COG2107 Predicted periplasmic solute-binding protein;gbkey=CDS;locus_tag=HP17_00185;product=Hypothetical protein;protein_id=EIE28986.1;transl_table=11 AIHX01000100.1 Genbank gene 12906 13949 . + . ID=gene-HP17_00190;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HP17_00190 AIHX01000100.1 Genbank CDS 12906 13949 . + 0 ID=cds-EIE28987.1;Parent=gene-HP17_00190;Dbxref=NCBI_GP:EIE28987.1;Name=EIE28987.1;Note=COG0468 RecA/RadA recombinase;gbkey=CDS;gene=recA;locus_tag=HP17_00190;product=recombinase A;protein_id=EIE28987.1;transl_table=11 AIHX01000100.1 Genbank gene 13960 15240 . + . ID=gene-HP17_00195;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HP17_00195 AIHX01000100.1 Genbank CDS 13960 15240 . + 0 ID=cds-EIE28988.1;Parent=gene-HP17_00195;Dbxref=NCBI_GP:EIE28988.1;Name=EIE28988.1;Note=COG0148 Enolase;gbkey=CDS;gene=eno;locus_tag=HP17_00195;product=enolase;protein_id=EIE28988.1;transl_table=11 AIHX01000100.1 Genbank gene 15233 15508 . + . ID=gene-HP17_00200;Name=HP17_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00200 AIHX01000100.1 Genbank CDS 15233 15508 . + 0 ID=cds-EIE28989.1;Parent=gene-HP17_00200;Dbxref=NCBI_GP:EIE28989.1;Name=EIE28989.1;gbkey=CDS;locus_tag=HP17_00200;product=Hypothetical protein;protein_id=EIE28989.1;transl_table=11 AIHX01000100.1 Genbank gene 15525 16121 . + . ID=gene-HP17_00205;Name=HP17_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00205 AIHX01000100.1 Genbank CDS 15525 16121 . + 0 ID=cds-EIE28990.1;Parent=gene-HP17_00205;Dbxref=NCBI_GP:EIE28990.1;Name=EIE28990.1;gbkey=CDS;locus_tag=HP17_00205;product=Hypothetical protein;protein_id=EIE28990.1;transl_table=11 AIHX01000100.1 Genbank gene 16126 16614 . + . ID=gene-HP17_00210;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HP17_00210 AIHX01000100.1 Genbank CDS 16126 16614 . + 0 ID=cds-EIE28991.1;Parent=gene-HP17_00210;Dbxref=NCBI_GP:EIE28991.1;Name=EIE28991.1;Note=COG0703 Shikimate kinase;gbkey=CDS;gene=aroK;locus_tag=HP17_00210;product=shikimate kinase;protein_id=EIE28991.1;transl_table=11 AIHX01000100.1 Genbank gene 16636 17592 . + . ID=gene-HP17_00215;Name=HP17_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00215 AIHX01000100.1 Genbank CDS 16636 17592 . + 0 ID=cds-EIE28992.1;Parent=gene-HP17_00215;Dbxref=NCBI_GP:EIE28992.1;Name=EIE28992.1;gbkey=CDS;locus_tag=HP17_00215;product=Hypothetical protein;protein_id=EIE28992.1;transl_table=11 AIHX01000100.1 Genbank gene 17589 18707 . - . ID=gene-HP17_00220;Name=HP17_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00220 AIHX01000100.1 Genbank CDS 17589 18707 . - 0 ID=cds-EIE28993.1;Parent=gene-HP17_00220;Dbxref=NCBI_GP:EIE28993.1;Name=EIE28993.1;Note=COG1442 Lipopolysaccharide biosynthesis proteins%2C LPS:glycosyltransferases;gbkey=CDS;locus_tag=HP17_00220;product=lipopolysaccharide 1%2C2-glucosyltransferase (rfaJ);protein_id=EIE28993.1;transl_table=11 AIHX01000100.1 Genbank gene 18860 19780 . + . ID=gene-HP17_00225;Name=HP17_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00225 AIHX01000100.1 Genbank CDS 18860 19780 . + 0 ID=cds-EIE28994.1;Parent=gene-HP17_00225;Dbxref=NCBI_GP:EIE28994.1;Name=EIE28994.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_00225;product=Hypothetical protein;protein_id=EIE28994.1;transl_table=11 AIHX01000100.1 Genbank gene 20058 20150 . - . ID=gene-HP17_00230;Name=HP17_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00230 AIHX01000100.1 Genbank CDS 20058 20150 . - 0 ID=cds-EIE28995.1;Parent=gene-HP17_00230;Dbxref=NCBI_GP:EIE28995.1;Name=EIE28995.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_00230;product=Hypothetical protein;protein_id=EIE28995.1;transl_table=11 AIHX01000100.1 Genbank gene 20300 21022 . - . ID=gene-HP17_00235;Name=HP17_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00235 AIHX01000100.1 Genbank CDS 20300 21022 . - 0 ID=cds-EIE28996.1;Parent=gene-HP17_00235;Dbxref=NCBI_GP:EIE28996.1;Name=EIE28996.1;Note=COG0217 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_00235;product=Hypothetical protein;protein_id=EIE28996.1;transl_table=11 AIHX01000100.1 Genbank gene 21023 21994 . - . ID=gene-HP17_00240;Name=HP17_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00240 AIHX01000100.1 Genbank CDS 21023 21994 . - 0 ID=cds-EIE28997.1;Parent=gene-HP17_00240;Dbxref=NCBI_GP:EIE28997.1;Name=EIE28997.1;Note=COG0113 Delta-aminolevulinic acid dehydratase;gbkey=CDS;locus_tag=HP17_00240;product=delta-aminolevulinic acid dehydratase;protein_id=EIE28997.1;transl_table=11 AIHX01000100.1 Genbank gene 22004 22086 . - . ID=gene-HP17_00245;Name=HP17_00245;end_range=22086,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00245;partial=true AIHX01000100.1 Genbank CDS 22004 22086 . - 2 ID=cds-EIE28998.1;Parent=gene-HP17_00245;Dbxref=NCBI_GP:EIE28998.1;Name=EIE28998.1;end_range=22086,.;gbkey=CDS;locus_tag=HP17_00245;partial=true;product=OmpR family two-component system sensor kinase;protein_id=EIE28998.1;transl_table=11 ##sequence-region AIHX01000101.1 1 13239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000101.1 Genbank region 1 13239 . + . ID=AIHX01000101.1:1..13239;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000101.1 Genbank gene 72 7202 . - . ID=gene-HP17_02479;Name=HP17_02479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02479 AIHX01000101.1 Genbank CDS 72 7202 . - 0 ID=cds-EIE28963.1;Parent=gene-HP17_02479;Dbxref=NCBI_GP:EIE28963.1;Name=EIE28963.1;gbkey=CDS;locus_tag=HP17_02479;product=vacuolating cytotoxin VacA-like protein;protein_id=EIE28963.1;transl_table=11 AIHX01000101.1 Genbank gene 7282 8280 . - . ID=gene-HP17_02484;Name=HP17_02484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02484 AIHX01000101.1 Genbank CDS 7282 8280 . - 0 ID=cds-EIE28964.1;Parent=gene-HP17_02484;Dbxref=NCBI_GP:EIE28964.1;Name=EIE28964.1;Note=COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase;gbkey=CDS;locus_tag=HP17_02484;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=EIE28964.1;transl_table=11 AIHX01000101.1 Genbank gene 8424 9116 . + . ID=gene-HP17_02489;Name=HP17_02489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02489 AIHX01000101.1 Genbank CDS 8424 9116 . + 0 ID=cds-EIE28965.1;Parent=gene-HP17_02489;Dbxref=NCBI_GP:EIE28965.1;Name=EIE28965.1;Note=COG0670 Integral membrane protein%2C interacts with FtsH;gbkey=CDS;locus_tag=HP17_02489;product=integral membrane protein;protein_id=EIE28965.1;transl_table=11 AIHX01000101.1 Genbank gene 9214 12471 . + . ID=gene-HP17_02494;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HP17_02494 AIHX01000101.1 Genbank CDS 9214 12471 . + 0 ID=cds-EIE28966.1;Parent=gene-HP17_02494;Dbxref=NCBI_GP:EIE28966.1;Name=EIE28966.1;Note=COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ);gbkey=CDS;gene=carB;locus_tag=HP17_02494;product=carbamoyl phosphate synthase large subunit;protein_id=EIE28966.1;transl_table=11 AIHX01000101.1 Genbank gene 12476 12907 . + . ID=gene-HP17_02499;Name=HP17_02499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02499 AIHX01000101.1 Genbank CDS 12476 12907 . + 0 ID=cds-EIE28967.1;Parent=gene-HP17_02499;Dbxref=NCBI_GP:EIE28967.1;Name=EIE28967.1;gbkey=CDS;locus_tag=HP17_02499;product=Hypothetical protein;protein_id=EIE28967.1;transl_table=11 AIHX01000101.1 Genbank gene 13084 13239 . + . ID=gene-HP17_02504;Name=HP17_02504;end_range=13239,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02504;partial=true AIHX01000101.1 Genbank CDS 13084 13239 . + 0 ID=cds-EIE28968.1;Parent=gene-HP17_02504;Dbxref=NCBI_GP:EIE28968.1;Name=EIE28968.1;end_range=13239,.;gbkey=CDS;locus_tag=HP17_02504;partial=true;product=iron-regulated outer membrane protein;protein_id=EIE28968.1;transl_table=11 ##sequence-region AIHX01000102.1 1 17352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000102.1 Genbank region 1 17352 . + . ID=AIHX01000102.1:1..17352;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000102.1 Genbank gene 1 2232 . + . ID=gene-HP17_02509;Name=HP17_02509;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02509;partial=true;start_range=.,1 AIHX01000102.1 Genbank CDS 1 2232 . + 0 ID=cds-EIE28946.1;Parent=gene-HP17_02509;Dbxref=NCBI_GP:EIE28946.1;Name=EIE28946.1;Note=COG1629 Outer membrane receptor proteins%2C mostly Fe transport;gbkey=CDS;locus_tag=HP17_02509;partial=true;product=iron-regulated outer membrane protein;protein_id=EIE28946.1;start_range=.,1;transl_table=11 AIHX01000102.1 Genbank gene 2229 2387 . - . ID=gene-HP17_02514;Name=HP17_02514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02514 AIHX01000102.1 Genbank CDS 2229 2387 . - 0 ID=cds-EIE28947.1;Parent=gene-HP17_02514;Dbxref=NCBI_GP:EIE28947.1;Name=EIE28947.1;gbkey=CDS;locus_tag=HP17_02514;product=Hypothetical protein;protein_id=EIE28947.1;transl_table=11 AIHX01000102.1 Genbank gene 2564 4108 . + . ID=gene-HP17_02519;Name=HP17_02519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02519 AIHX01000102.1 Genbank CDS 2564 4108 . + 0 ID=cds-EIE28948.1;Parent=gene-HP17_02519;Dbxref=NCBI_GP:EIE28948.1;Name=EIE28948.1;Note=COG1190 Lysyl-tRNA synthetase (class II);gbkey=CDS;locus_tag=HP17_02519;product=outer membrane protein;protein_id=EIE28948.1;transl_table=11 AIHX01000102.1 Genbank gene 4907 6502 . - . ID=gene-HP17_02524;Name=HP17_02524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02524 AIHX01000102.1 Genbank CDS 4907 6502 . - 0 ID=cds-EIE28949.1;Parent=gene-HP17_02524;Dbxref=NCBI_GP:EIE28949.1;Name=EIE28949.1;gbkey=CDS;locus_tag=HP17_02524;product=outer membrane protein HopB;protein_id=EIE28949.1;transl_table=11 AIHX01000102.1 Genbank gene 6524 8080 . - . ID=gene-HP17_02529;Name=HP17_02529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02529 AIHX01000102.1 Genbank CDS 6524 8080 . - 0 ID=cds-EIE28950.1;Parent=gene-HP17_02529;Dbxref=NCBI_GP:EIE28950.1;Name=EIE28950.1;gbkey=CDS;locus_tag=HP17_02529;product=outer membrane porin and adhesin HopC;protein_id=EIE28950.1;transl_table=11 AIHX01000102.1 Genbank gene 8247 8393 . - . ID=gene-HP17_02534;Name=HP17_02534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02534 AIHX01000102.1 Genbank CDS 8247 8393 . - 0 ID=cds-EIE28951.1;Parent=gene-HP17_02534;Dbxref=NCBI_GP:EIE28951.1;Name=EIE28951.1;gbkey=CDS;locus_tag=HP17_02534;product=Hypothetical protein;protein_id=EIE28951.1;transl_table=11 AIHX01000102.1 Genbank gene 8657 8815 . + . ID=gene-HP17_02539;Name=HP17_02539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02539 AIHX01000102.1 Genbank CDS 8657 8815 . + 0 ID=cds-EIE28952.1;Parent=gene-HP17_02539;Dbxref=NCBI_GP:EIE28952.1;Name=EIE28952.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_02539;product=Hypothetical protein;protein_id=EIE28952.1;transl_table=11 AIHX01000102.1 Genbank gene 8909 10936 . - . ID=gene-HP17_02544;Name=HP17_02544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02544 AIHX01000102.1 Genbank CDS 8909 10936 . - 0 ID=cds-EIE28953.1;Parent=gene-HP17_02544;Dbxref=NCBI_GP:EIE28953.1;Name=EIE28953.1;Note=COG0210 Superfamily I DNA and RNA helicases;gbkey=CDS;locus_tag=HP17_02544;product=Rep helicase;protein_id=EIE28953.1;transl_table=11 AIHX01000102.1 Genbank gene 10945 12090 . - . ID=gene-HP17_02549;Name=HP17_02549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02549 AIHX01000102.1 Genbank CDS 10945 12090 . - 0 ID=cds-EIE28954.1;Parent=gene-HP17_02549;Dbxref=NCBI_GP:EIE28954.1;Name=EIE28954.1;Note=COG0827 Adenine-specific DNA methylase;gbkey=CDS;locus_tag=HP17_02549;product=adenine specific DNA methyltransferase;protein_id=EIE28954.1;transl_table=11 AIHX01000102.1 Genbank gene 12071 12688 . - . ID=gene-HP17_02554;Name=HP17_02554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02554 AIHX01000102.1 Genbank CDS 12071 12688 . - 0 ID=cds-EIE28955.1;Parent=gene-HP17_02554;Dbxref=NCBI_GP:EIE28955.1;Name=EIE28955.1;gbkey=CDS;locus_tag=HP17_02554;product=restriction endonuclease Hpy8I;protein_id=EIE28955.1;transl_table=11 AIHX01000102.1 Genbank gene 12740 14557 . - . ID=gene-HP17_02559;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=HP17_02559 AIHX01000102.1 Genbank CDS 12740 14557 . - 0 ID=cds-EIE28956.1;Parent=gene-HP17_02559;Dbxref=NCBI_GP:EIE28956.1;Name=EIE28956.1;Note=COG1749 Flagellar hook protein FlgE;gbkey=CDS;gene=flgE;locus_tag=HP17_02559;product=flagellar hook protein FlgE;protein_id=EIE28956.1;transl_table=11 AIHX01000102.1 Genbank gene 14554 15519 . - . ID=gene-HP17_02564;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=HP17_02564 AIHX01000102.1 Genbank CDS 14554 15519 . - 0 ID=cds-EIE28957.1;Parent=gene-HP17_02564;Dbxref=NCBI_GP:EIE28957.1;Name=EIE28957.1;Note=COG1843 Flagellar hook capping protein;gbkey=CDS;gene=flgD;locus_tag=HP17_02564;product=flagellar basal body rod modification protein;protein_id=EIE28957.1;transl_table=11 AIHX01000102.1 Genbank gene 15570 17138 . - . ID=gene-HP17_02565;Name=fliK;gbkey=Gene;gene=fliK;gene_biotype=protein_coding;locus_tag=HP17_02565 AIHX01000102.1 Genbank CDS 15570 17138 . - 0 ID=cds-EIE28958.1;Parent=gene-HP17_02565;Dbxref=NCBI_GP:EIE28958.1;Name=EIE28958.1;gbkey=CDS;gene=fliK;locus_tag=HP17_02565;product=FliK;protein_id=EIE28958.1;transl_table=11 ##sequence-region AIHX01000103.1 1 4613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000103.1 Genbank region 1 4613 . + . ID=AIHX01000103.1:1..4613;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000103.1 Genbank pseudogene 1 872 . + . ID=gene-HP17_02579;Name=HP17_02579;Note=non-functional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_02579;partial=true;pseudo=true;start_range=.,1 AIHX01000103.1 Genbank sequence_feature 1 872 . + . ID=id-HP17_02579;Note=non-functional due to frameshift;gbkey=misc_feature;locus_tag=HP17_02579;partial=true;pseudo=true;start_range=.,1 AIHX01000103.1 Genbank gene 970 1269 . + . ID=gene-HP17_02594;Name=HP17_02594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02594 AIHX01000103.1 Genbank CDS 970 1269 . + 0 ID=cds-EIE28929.1;Parent=gene-HP17_02594;Dbxref=NCBI_GP:EIE28929.1;Name=EIE28929.1;Note=COG1917 Uncharacterized conserved protein%2C contains double-stranded beta-helix domain;gbkey=CDS;locus_tag=HP17_02594;product=Hypothetical protein;protein_id=EIE28929.1;transl_table=11 AIHX01000103.1 Genbank gene 1280 1408 . + . ID=gene-HP17_02599;Name=HP17_02599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02599 AIHX01000103.1 Genbank CDS 1280 1408 . + 0 ID=cds-EIE28930.1;Parent=gene-HP17_02599;Dbxref=NCBI_GP:EIE28930.1;Name=EIE28930.1;gbkey=CDS;locus_tag=HP17_02599;product=Hypothetical protein;protein_id=EIE28930.1;transl_table=11 AIHX01000103.1 Genbank gene 1520 2248 . + . ID=gene-HP17_02604;Name=HP17_02604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02604 AIHX01000103.1 Genbank CDS 1520 2248 . + 0 ID=cds-EIE28931.1;Parent=gene-HP17_02604;Dbxref=NCBI_GP:EIE28931.1;Name=EIE28931.1;Note=COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase;gbkey=CDS;locus_tag=HP17_02604;product=hydrogenase/urease nickel incorporation protein hypB;protein_id=EIE28931.1;transl_table=11 AIHX01000103.1 Genbank gene 2248 2484 . + . ID=gene-HP17_02609;Name=HP17_02609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02609 AIHX01000103.1 Genbank CDS 2248 2484 . + 0 ID=cds-EIE28932.1;Parent=gene-HP17_02609;Dbxref=NCBI_GP:EIE28932.1;Name=EIE28932.1;Note=COG0298 Hydrogenase maturation factor;gbkey=CDS;locus_tag=HP17_02609;product=hydrogenase assembly chaperone;protein_id=EIE28932.1;transl_table=11 AIHX01000103.1 Genbank gene 2499 3611 . + . ID=gene-HP17_02614;Name=HP17_02614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02614 AIHX01000103.1 Genbank CDS 2499 3611 . + 0 ID=cds-EIE28933.1;Parent=gene-HP17_02614;Dbxref=NCBI_GP:EIE28933.1;Name=EIE28933.1;Note=COG0409 Hydrogenase maturation factor;gbkey=CDS;locus_tag=HP17_02614;product=hydrogenase isoenzymes formation protein HypD;protein_id=EIE28933.1;transl_table=11 AIHX01000103.1 Genbank gene 3578 3841 . + . ID=gene-HP17_02619;Name=HP17_02619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02619 AIHX01000103.1 Genbank CDS 3578 3841 . + 0 ID=cds-EIE28934.1;Parent=gene-HP17_02619;Dbxref=NCBI_GP:EIE28934.1;Name=EIE28934.1;Note=COG0409 Hydrogenase maturation factor;gbkey=CDS;locus_tag=HP17_02619;product=Hypothetical protein;protein_id=EIE28934.1;transl_table=11 AIHX01000103.1 Genbank gene 4287 4361 . + . ID=gene-HP17_t02631;Name=HP17_t02631;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02631 AIHX01000103.1 Genbank tRNA 4287 4361 . + . ID=rna-HP17_t02631;Parent=gene-HP17_t02631;gbkey=tRNA;locus_tag=HP17_t02631;product=tRNA-Gln AIHX01000103.1 Genbank exon 4287 4361 . + . ID=exon-HP17_t02631-1;Parent=rna-HP17_t02631;gbkey=tRNA;locus_tag=HP17_t02631;product=tRNA-Gln AIHX01000103.1 Genbank gene 4380 4456 . + . ID=gene-HP17_t02633;Name=HP17_t02633;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02633 AIHX01000103.1 Genbank tRNA 4380 4456 . + . ID=rna-HP17_t02633;Parent=gene-HP17_t02633;gbkey=tRNA;locus_tag=HP17_t02633;product=tRNA-Met AIHX01000103.1 Genbank exon 4380 4456 . + . ID=exon-HP17_t02633-1;Parent=rna-HP17_t02633;gbkey=tRNA;locus_tag=HP17_t02633;product=tRNA-Met AIHX01000103.1 Genbank gene 4472 4613 . - . ID=gene-HP17_02624;Name=HP17_02624;end_range=4613,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02624;partial=true AIHX01000103.1 Genbank CDS 4472 4613 . - 1 ID=cds-EIE28935.1;Parent=gene-HP17_02624;Dbxref=NCBI_GP:EIE28935.1;Name=EIE28935.1;Note=not present in 26695~not present in J99~not present in P79;end_range=4613,.;gbkey=CDS;locus_tag=HP17_02624;partial=true;product=Hypothetical protein;protein_id=EIE28935.1;transl_table=11 ##sequence-region AIHX01000104.1 1 5830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000104.1 Genbank region 1 5830 . + . ID=AIHX01000104.1:1..5830;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000104.1 Genbank gene 1 104 . + . ID=gene-HP17_02633;Name=HP17_02633;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02633;partial=true;start_range=.,1 AIHX01000104.1 Genbank CDS 1 104 . + 2 ID=cds-EIE28903.1;Parent=gene-HP17_02633;Dbxref=NCBI_GP:EIE28903.1;Name=EIE28903.1;gbkey=CDS;locus_tag=HP17_02633;partial=true;product=Hypothetical protein;protein_id=EIE28903.1;start_range=.,1;transl_table=11 AIHX01000104.1 Genbank gene 338 568 . - . ID=gene-HP17_02638;Name=HP17_02638;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02638 AIHX01000104.1 Genbank CDS 338 568 . - 0 ID=cds-EIE28904.1;Parent=gene-HP17_02638;Dbxref=NCBI_GP:EIE28904.1;Name=EIE28904.1;Note=COG2841 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_02638;product=Hypothetical protein;protein_id=EIE28904.1;transl_table=11 AIHX01000104.1 Genbank gene 687 3230 . + . ID=gene-HP17_02643;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=HP17_02643 AIHX01000104.1 Genbank CDS 687 3230 . + 0 ID=cds-EIE28905.1;Parent=gene-HP17_02643;Dbxref=NCBI_GP:EIE28905.1;Name=EIE28905.1;Note=COG0013 Alanyl-tRNA synthetase;gbkey=CDS;gene=alaS;locus_tag=HP17_02643;product=alanyl-tRNA synthetase;protein_id=EIE28905.1;transl_table=11 AIHX01000104.1 Genbank gene 3232 3804 . + . ID=gene-HP17_02648;Name=HP17_02648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02648 AIHX01000104.1 Genbank CDS 3232 3804 . + 0 ID=cds-EIE28906.1;Parent=gene-HP17_02648;Dbxref=NCBI_GP:EIE28906.1;Name=EIE28906.1;Note=COG0424 Nucleotide-binding protein implicated in inhibition of septum formation;gbkey=CDS;locus_tag=HP17_02648;product=Maf-like protein;protein_id=EIE28906.1;transl_table=11 AIHX01000104.1 Genbank gene 3915 4391 . + . ID=gene-HP17_02653;Name=HP17_02653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02653 AIHX01000104.1 Genbank CDS 3915 4391 . + 0 ID=cds-EIE28907.1;Parent=gene-HP17_02653;Dbxref=NCBI_GP:EIE28907.1;Name=EIE28907.1;gbkey=CDS;locus_tag=HP17_02653;product=Hypothetical protein;protein_id=EIE28907.1;transl_table=11 AIHX01000104.1 Genbank gene 4537 4794 . + . ID=gene-HP17_02658;Name=HP17_02658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02658 AIHX01000104.1 Genbank CDS 4537 4794 . + 0 ID=cds-EIE28908.1;Parent=gene-HP17_02658;Dbxref=NCBI_GP:EIE28908.1;Name=EIE28908.1;gbkey=CDS;locus_tag=HP17_02658;product=Hypothetical protein;protein_id=EIE28908.1;transl_table=11 AIHX01000104.1 Genbank gene 4876 5830 . - . ID=gene-HP17_02663;Name=amiF;end_range=5830,.;gbkey=Gene;gene=amiF;gene_biotype=protein_coding;locus_tag=HP17_02663;partial=true AIHX01000104.1 Genbank CDS 4876 5830 . - 1 ID=cds-EIE28909.1;Parent=gene-HP17_02663;Dbxref=NCBI_GP:EIE28909.1;Name=EIE28909.1;Note=COG0388 Predicted amidohydrolase;end_range=5830,.;gbkey=CDS;gene=amiF;locus_tag=HP17_02663;partial=true;product=formamidase;protein_id=EIE28909.1;transl_table=11 ##sequence-region AIHX01000105.1 1 42505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000105.1 Genbank region 1 42505 . + . ID=AIHX01000105.1:1..42505;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000105.1 Genbank gene 185 1312 . - . ID=gene-HP17_02668;Name=HP17_02668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02668 AIHX01000105.1 Genbank CDS 185 1312 . - 0 ID=cds-EIE28859.1;Parent=gene-HP17_02668;Dbxref=NCBI_GP:EIE28859.1;Name=EIE28859.1;Note=COG0505 Carbamoylphosphate synthase small subunit;gbkey=CDS;locus_tag=HP17_02668;product=carbamoyl phosphate synthase small subunit;protein_id=EIE28859.1;transl_table=11 AIHX01000105.1 Genbank gene 1312 1863 . - . ID=gene-HP17_02673;Name=HP17_02673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02673 AIHX01000105.1 Genbank CDS 1312 1863 . - 0 ID=cds-EIE28860.1;Parent=gene-HP17_02673;Dbxref=NCBI_GP:EIE28860.1;Name=EIE28860.1;Note=COG2952 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_02673;product=Hypothetical protein;protein_id=EIE28860.1;transl_table=11 AIHX01000105.1 Genbank gene 1942 3189 . - . ID=gene-HP17_02678;Name=HP17_02678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02678 AIHX01000105.1 Genbank CDS 1942 3189 . - 0 ID=cds-EIE28861.1;Parent=gene-HP17_02678;Dbxref=NCBI_GP:EIE28861.1;Name=EIE28861.1;gbkey=CDS;locus_tag=HP17_02678;product=integral membrane protein;protein_id=EIE28861.1;transl_table=11 AIHX01000105.1 Genbank gene 3193 4089 . - . ID=gene-HP17_02683;Name=HP17_02683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02683 AIHX01000105.1 Genbank CDS 3193 4089 . - 0 ID=cds-EIE28862.1;Parent=gene-HP17_02683;Dbxref=NCBI_GP:EIE28862.1;Name=EIE28862.1;Note=COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily;gbkey=CDS;locus_tag=HP17_02683;product=membrane transport protein;protein_id=EIE28862.1;transl_table=11 AIHX01000105.1 Genbank gene 4452 4913 . + . ID=gene-HP17_02688;Name=HP17_02688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02688 AIHX01000105.1 Genbank CDS 4452 4913 . + 0 ID=cds-EIE28863.1;Parent=gene-HP17_02688;Dbxref=NCBI_GP:EIE28863.1;Name=EIE28863.1;gbkey=CDS;locus_tag=HP17_02688;product=Hypothetical protein;protein_id=EIE28863.1;transl_table=11 AIHX01000105.1 Genbank gene 4935 6077 . - . ID=gene-HP17_02693;Name=HP17_02693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02693 AIHX01000105.1 Genbank CDS 4935 6077 . - 0 ID=cds-EIE28864.1;Parent=gene-HP17_02693;Dbxref=NCBI_GP:EIE28864.1;Name=EIE28864.1;Note=COG0294 Dihydropteroate synthase and related enzymes;gbkey=CDS;locus_tag=HP17_02693;product=dihydropteroate synthase;protein_id=EIE28864.1;transl_table=11 AIHX01000105.1 Genbank gene 6074 6730 . - . ID=gene-HP17_02698;Name=HP17_02698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02698 AIHX01000105.1 Genbank CDS 6074 6730 . - 0 ID=cds-EIE28865.1;Parent=gene-HP17_02698;Dbxref=NCBI_GP:EIE28865.1;Name=EIE28865.1;Note=COG0470 ATPase involved in DNA replication;gbkey=CDS;locus_tag=HP17_02698;product=DNA polymerase III subunit delta';protein_id=EIE28865.1;transl_table=11 AIHX01000105.1 Genbank gene 6727 7269 . - . ID=gene-HP17_02703;Name=HP17_02703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02703 AIHX01000105.1 Genbank CDS 6727 7269 . - 0 ID=cds-EIE28866.1;Parent=gene-HP17_02703;Dbxref=NCBI_GP:EIE28866.1;Name=EIE28866.1;gbkey=CDS;locus_tag=HP17_02703;product=Hypothetical protein;protein_id=EIE28866.1;transl_table=11 AIHX01000105.1 Genbank gene 7266 8483 . - . ID=gene-HP17_02708;Name=HP17_02708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02708 AIHX01000105.1 Genbank CDS 7266 8483 . - 0 ID=cds-EIE28867.1;Parent=gene-HP17_02708;Dbxref=NCBI_GP:EIE28867.1;Name=EIE28867.1;Note=COG0527 Aspartokinases;gbkey=CDS;locus_tag=HP17_02708;product=aspartate kinase;protein_id=EIE28867.1;transl_table=11 AIHX01000105.1 Genbank gene 8485 8952 . - . ID=gene-HP17_02713;Name=HP17_02713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02713 AIHX01000105.1 Genbank CDS 8485 8952 . - 0 ID=cds-EIE28868.1;Parent=gene-HP17_02713;Dbxref=NCBI_GP:EIE28868.1;Name=EIE28868.1;Note=COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes;gbkey=CDS;locus_tag=HP17_02713;product=RNA pyrophosphohydrolase;protein_id=EIE28868.1;transl_table=11 AIHX01000105.1 Genbank gene 9028 9120 . + . ID=gene-HP17_02718;Name=HP17_02718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02718 AIHX01000105.1 Genbank CDS 9028 9120 . + 0 ID=cds-EIE28869.1;Parent=gene-HP17_02718;Dbxref=NCBI_GP:EIE28869.1;Name=EIE28869.1;gbkey=CDS;locus_tag=HP17_02718;product=Hypothetical protein;protein_id=EIE28869.1;transl_table=11 AIHX01000105.1 Genbank gene 9113 9403 . - . ID=gene-HP17_02723;Name=HP17_02723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02723 AIHX01000105.1 Genbank CDS 9113 9403 . - 0 ID=cds-EIE28870.1;Parent=gene-HP17_02723;Dbxref=NCBI_GP:EIE28870.1;Name=EIE28870.1;Note=COG2863 Cytochrome c553;gbkey=CDS;locus_tag=HP17_02723;product=cytochrome c-553;protein_id=EIE28870.1;transl_table=11 AIHX01000105.1 Genbank gene 9499 10536 . + . ID=gene-HP17_02728;Name=HP17_02728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02728 AIHX01000105.1 Genbank CDS 9499 10536 . + 0 ID=cds-EIE28871.1;Parent=gene-HP17_02728;Dbxref=NCBI_GP:EIE28871.1;Name=EIE28871.1;Note=COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases;gbkey=CDS;locus_tag=HP17_02728;product=coproporphyrinogen III oxidase;protein_id=EIE28871.1;transl_table=11 AIHX01000105.1 Genbank gene 10594 10974 . - . ID=gene-HP17_02733;Name=HP17_02733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02733 AIHX01000105.1 Genbank CDS 10594 10974 . - 0 ID=cds-EIE28872.1;Parent=gene-HP17_02733;Dbxref=NCBI_GP:EIE28872.1;Name=EIE28872.1;Note=COG0239 Integral membrane protein possibly involved in chromosome condensation;gbkey=CDS;locus_tag=HP17_02733;product=camphor resistance protein CrcB;protein_id=EIE28872.1;transl_table=11 AIHX01000105.1 Genbank gene 11021 11701 . - . ID=gene-HP17_02738;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=HP17_02738 AIHX01000105.1 Genbank CDS 11021 11701 . - 0 ID=cds-EIE28873.1;Parent=gene-HP17_02738;Dbxref=NCBI_GP:EIE28873.1;Name=EIE28873.1;Note=COG1587 Uroporphyrinogen-III synthase;gbkey=CDS;gene=hemD;locus_tag=HP17_02738;product=uroporphyrinogen-III synthase;protein_id=EIE28873.1;transl_table=11 AIHX01000105.1 Genbank gene 11704 12042 . - . ID=gene-HP17_02743;Name=HP17_02743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02743 AIHX01000105.1 Genbank CDS 11704 12042 . - 0 ID=cds-EIE28874.1;Parent=gene-HP17_02743;Dbxref=NCBI_GP:EIE28874.1;Name=EIE28874.1;Note=COG0607 Rhodanese-related sulfurtransferase;gbkey=CDS;locus_tag=HP17_02743;product=Hypothetical protein;protein_id=EIE28874.1;transl_table=11 AIHX01000105.1 Genbank gene 12114 12350 . + . ID=gene-HP17_02748;Name=HP17_02748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02748 AIHX01000105.1 Genbank CDS 12114 12350 . + 0 ID=cds-EIE28875.1;Parent=gene-HP17_02748;Dbxref=NCBI_GP:EIE28875.1;Name=EIE28875.1;Note=COG0277 FAD/FMN-containing dehydrogenases;gbkey=CDS;locus_tag=HP17_02748;product=D-lactate dehydrogenase;protein_id=EIE28875.1;transl_table=11 AIHX01000105.1 Genbank gene 12372 14954 . + . ID=gene-HP17_02753;Name=HP17_02753;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02753 AIHX01000105.1 Genbank CDS 12372 14954 . + 0 ID=cds-EIE28876.1;Parent=gene-HP17_02753;Dbxref=NCBI_GP:EIE28876.1;Name=EIE28876.1;Note=COG0277 FAD/FMN-containing dehydrogenases;gbkey=CDS;locus_tag=HP17_02753;product=D-lactate dehydrogenase;protein_id=EIE28876.1;transl_table=11 AIHX01000105.1 Genbank gene 14995 15639 . + . ID=gene-HP17_02758;Name=HP17_02758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02758 AIHX01000105.1 Genbank CDS 14995 15639 . + 0 ID=cds-EIE28877.1;Parent=gene-HP17_02758;Dbxref=NCBI_GP:EIE28877.1;Name=EIE28877.1;Note=COG0020 Undecaprenyl pyrophosphate synthase;gbkey=CDS;locus_tag=HP17_02758;product=undecaprenyl pyrophosphate synthase;protein_id=EIE28877.1;transl_table=11 AIHX01000105.1 Genbank gene 15692 16378 . + . ID=gene-HP17_02763;Name=HP17_02763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02763 AIHX01000105.1 Genbank CDS 15692 16378 . + 0 ID=cds-EIE28878.1;Parent=gene-HP17_02763;Dbxref=NCBI_GP:EIE28878.1;Name=EIE28878.1;Note=COG1131 ABC-type multidrug transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_02763;product=ABC-2 type transport system ATP-binding protein;protein_id=EIE28878.1;transl_table=11 AIHX01000105.1 Genbank gene 16691 17965 . + . ID=gene-HP17_02768;Name=HP17_02768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02768 AIHX01000105.1 Genbank CDS 16691 17965 . + 0 ID=cds-EIE28879.1;Parent=gene-HP17_02768;Dbxref=NCBI_GP:EIE28879.1;Name=EIE28879.1;Note=COG0151 Phosphoribosylamine-glycine ligase;gbkey=CDS;locus_tag=HP17_02768;product=glycinamide ribonucleotide synthetase;protein_id=EIE28879.1;transl_table=11 AIHX01000105.1 Genbank gene 18007 18486 . + . ID=gene-HP17_02773;Name=HP17_02773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02773 AIHX01000105.1 Genbank CDS 18007 18486 . + 0 ID=cds-EIE28880.1;Parent=gene-HP17_02773;Dbxref=NCBI_GP:EIE28880.1;Name=EIE28880.1;gbkey=CDS;locus_tag=HP17_02773;product=Hypothetical protein;protein_id=EIE28880.1;transl_table=11 AIHX01000105.1 Genbank gene 18489 20750 . + . ID=gene-HP17_02778;Name=HP17_02778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02778 AIHX01000105.1 Genbank CDS 18489 20750 . + 0 ID=cds-EIE28881.1;Parent=gene-HP17_02778;Dbxref=NCBI_GP:EIE28881.1;Name=EIE28881.1;Note=COG1452 Organic solvent tolerance protein OstA;gbkey=CDS;locus_tag=HP17_02778;product=organic solvent tolerance protein;protein_id=EIE28881.1;transl_table=11 AIHX01000105.1 Genbank gene 20766 21470 . + . ID=gene-HP17_02783;Name=HP17_02783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02783 AIHX01000105.1 Genbank CDS 20766 21470 . + 0 ID=cds-EIE28882.1;Parent=gene-HP17_02783;Dbxref=NCBI_GP:EIE28882.1;Name=EIE28882.1;Note=COG1926 Predicted phosphoribosyltransferases;gbkey=CDS;locus_tag=HP17_02783;product=phosphoribosyltransferase;protein_id=EIE28882.1;transl_table=11 AIHX01000105.1 Genbank gene 21473 23539 . + . ID=gene-HP17_02788;Name=HP17_02788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02788 AIHX01000105.1 Genbank CDS 21473 23539 . + 0 ID=cds-EIE28883.1;Parent=gene-HP17_02788;Dbxref=NCBI_GP:EIE28883.1;Name=EIE28883.1;Note=COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase);gbkey=CDS;locus_tag=HP17_02788;product=polynucleotide phosphorylase/polyadenylase;protein_id=EIE28883.1;transl_table=11 AIHX01000105.1 Genbank gene 23672 23989 . + . ID=gene-HP17_02793;Name=HP17_02793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02793 AIHX01000105.1 Genbank CDS 23672 23989 . + 0 ID=cds-EIE28884.1;Parent=gene-HP17_02793;Dbxref=NCBI_GP:EIE28884.1;Name=EIE28884.1;Note=COG0636 F0F1-type ATP synthase%2C subunit c/Archaeal/vacuolar-type H+-ATPase%2C subunit K;gbkey=CDS;locus_tag=HP17_02793;product=F0F1 ATP synthase subunit C;protein_id=EIE28884.1;transl_table=11 AIHX01000105.1 Genbank gene 24060 24146 . + . ID=gene-HP17_t02870;Name=HP17_t02870;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02870 AIHX01000105.1 Genbank tRNA 24060 24146 . + . ID=rna-HP17_t02870;Parent=gene-HP17_t02870;gbkey=tRNA;locus_tag=HP17_t02870;product=tRNA-Leu AIHX01000105.1 Genbank exon 24060 24146 . + . ID=exon-HP17_t02870-1;Parent=rna-HP17_t02870;gbkey=tRNA;locus_tag=HP17_t02870;product=tRNA-Leu AIHX01000105.1 Genbank gene 24200 24286 . + . ID=gene-HP17_t02872;Name=HP17_t02872;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02872 AIHX01000105.1 Genbank tRNA 24200 24286 . + . ID=rna-HP17_t02872;Parent=gene-HP17_t02872;gbkey=tRNA;locus_tag=HP17_t02872;product=tRNA-Leu AIHX01000105.1 Genbank exon 24200 24286 . + . ID=exon-HP17_t02872-1;Parent=rna-HP17_t02872;gbkey=tRNA;locus_tag=HP17_t02872;product=tRNA-Leu AIHX01000105.1 Genbank gene 24606 25127 . + . ID=gene-HP17_02798;Name=HP17_02798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02798 AIHX01000105.1 Genbank CDS 24606 25127 . + 0 ID=cds-EIE28885.1;Parent=gene-HP17_02798;Dbxref=NCBI_GP:EIE28885.1;Name=EIE28885.1;Note=COG1045 Serine acetyltransferase;gbkey=CDS;locus_tag=HP17_02798;product=serine acetyltransferase;protein_id=EIE28885.1;transl_table=11 AIHX01000105.1 Genbank gene 25342 25626 . + . ID=gene-HP17_02803;Name=HP17_02803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02803 AIHX01000105.1 Genbank CDS 25342 25626 . + 0 ID=cds-EIE28886.1;Parent=gene-HP17_02803;Dbxref=NCBI_GP:EIE28886.1;Name=EIE28886.1;gbkey=CDS;locus_tag=HP17_02803;product=Hypothetical protein;protein_id=EIE28886.1;transl_table=11 AIHX01000105.1 Genbank gene 25954 26943 . + . ID=gene-HP17_02808;Name=HP17_02808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02808 AIHX01000105.1 Genbank CDS 25954 26943 . + 0 ID=cds-EIE28887.1;Parent=gene-HP17_02808;Dbxref=NCBI_GP:EIE28887.1;Name=EIE28887.1;Note=COG3392 Adenine-specific DNA methylase;gbkey=CDS;locus_tag=HP17_02808;product=Site-specific DNA-methyltransferase;protein_id=EIE28887.1;transl_table=11 AIHX01000105.1 Genbank gene 27046 27714 . + . ID=gene-HP17_02813;Name=HP17_02813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02813 AIHX01000105.1 Genbank CDS 27046 27714 . + 0 ID=cds-EIE28888.1;Parent=gene-HP17_02813;Dbxref=NCBI_GP:EIE28888.1;Name=EIE28888.1;Note=COG0546 Predicted phosphatases;gbkey=CDS;locus_tag=HP17_02813;product=Hypothetical protein;protein_id=EIE28888.1;transl_table=11 AIHX01000105.1 Genbank gene 27725 29461 . - . ID=gene-HP17_02818;Name=HP17_02818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02818 AIHX01000105.1 Genbank CDS 27725 29461 . - 0 ID=cds-EIE28889.1;Parent=gene-HP17_02818;Dbxref=NCBI_GP:EIE28889.1;Name=EIE28889.1;Note=COG1132 ABC-type multidrug transport system%2C ATPase and permease components;gbkey=CDS;locus_tag=HP17_02818;product=ABC transporter ATP-binding protein;protein_id=EIE28889.1;transl_table=11 AIHX01000105.1 Genbank gene 29652 29727 . + . ID=gene-HP17_t02874;Name=HP17_t02874;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02874 AIHX01000105.1 Genbank tRNA 29652 29727 . + . ID=rna-HP17_t02874;Parent=gene-HP17_t02874;gbkey=tRNA;locus_tag=HP17_t02874;product=tRNA-Thr AIHX01000105.1 Genbank exon 29652 29727 . + . ID=exon-HP17_t02874-1;Parent=rna-HP17_t02874;gbkey=tRNA;locus_tag=HP17_t02874;product=tRNA-Thr AIHX01000105.1 Genbank gene 29755 29839 . + . ID=gene-HP17_t02876;Name=HP17_t02876;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02876 AIHX01000105.1 Genbank tRNA 29755 29839 . + . ID=rna-HP17_t02876;Parent=gene-HP17_t02876;gbkey=tRNA;locus_tag=HP17_t02876;product=tRNA-Tyr AIHX01000105.1 Genbank exon 29755 29839 . + . ID=exon-HP17_t02876-1;Parent=rna-HP17_t02876;gbkey=tRNA;locus_tag=HP17_t02876;product=tRNA-Tyr AIHX01000105.1 Genbank gene 29855 29931 . + . ID=gene-HP17_t02878;Name=HP17_t02878;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02878 AIHX01000105.1 Genbank tRNA 29855 29931 . + . ID=rna-HP17_t02878;Parent=gene-HP17_t02878;gbkey=tRNA;locus_tag=HP17_t02878;product=tRNA-Gly AIHX01000105.1 Genbank exon 29855 29931 . + . ID=exon-HP17_t02878-1;Parent=rna-HP17_t02878;gbkey=tRNA;locus_tag=HP17_t02878;product=tRNA-Gly AIHX01000105.1 Genbank gene 29962 30036 . + . ID=gene-HP17_t02880;Name=HP17_t02880;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02880 AIHX01000105.1 Genbank tRNA 29962 30036 . + . ID=rna-HP17_t02880;Parent=gene-HP17_t02880;gbkey=tRNA;locus_tag=HP17_t02880;product=tRNA-Thr AIHX01000105.1 Genbank exon 29962 30036 . + . ID=exon-HP17_t02880-1;Parent=rna-HP17_t02880;gbkey=tRNA;locus_tag=HP17_t02880;product=tRNA-Thr AIHX01000105.1 Genbank gene 30163 31362 . + . ID=gene-HP17_02823;Name=HP17_02823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02823 AIHX01000105.1 Genbank CDS 30163 31362 . + 0 ID=cds-EIE28890.1;Parent=gene-HP17_02823;Dbxref=NCBI_GP:EIE28890.1;Name=EIE28890.1;Note=COG0050 GTPases - translation elongation factors;gbkey=CDS;locus_tag=HP17_02823;product=elongation factor Tu;protein_id=EIE28890.1;transl_table=11 AIHX01000105.1 Genbank gene 31396 31554 . + . ID=gene-HP17_02828;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HP17_02828 AIHX01000105.1 Genbank CDS 31396 31554 . + 0 ID=cds-EIE28891.1;Parent=gene-HP17_02828;Dbxref=NCBI_GP:EIE28891.1;Name=EIE28891.1;Note=COG0267 Ribosomal protein L33;gbkey=CDS;gene=rpmG;locus_tag=HP17_02828;product=50S ribosomal protein L33;protein_id=EIE28891.1;transl_table=11 AIHX01000105.1 Genbank gene 31594 31669 . + . ID=gene-HP17_t02882;Name=HP17_t02882;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t02882 AIHX01000105.1 Genbank tRNA 31594 31669 . + . ID=rna-HP17_t02882;Parent=gene-HP17_t02882;gbkey=tRNA;locus_tag=HP17_t02882;product=tRNA-Trp AIHX01000105.1 Genbank exon 31594 31669 . + . ID=exon-HP17_t02882-1;Parent=rna-HP17_t02882;gbkey=tRNA;locus_tag=HP17_t02882;product=tRNA-Trp AIHX01000105.1 Genbank gene 31812 31991 . + . ID=gene-HP17_02833;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=HP17_02833 AIHX01000105.1 Genbank CDS 31812 31991 . + 0 ID=cds-EIE28892.1;Parent=gene-HP17_02833;Dbxref=NCBI_GP:EIE28892.1;Name=EIE28892.1;Note=COG0690 Preprotein translocase subunit SecE;gbkey=CDS;gene=secE;locus_tag=HP17_02833;product=preprotein translocase subunit SecE;protein_id=EIE28892.1;transl_table=11 AIHX01000105.1 Genbank gene 32021 32548 . + . ID=gene-HP17_02838;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=HP17_02838 AIHX01000105.1 Genbank CDS 32021 32548 . + 0 ID=cds-EIE28893.1;Parent=gene-HP17_02838;Dbxref=NCBI_GP:EIE28893.1;Name=EIE28893.1;Note=COG0250 Transcription antiterminator;gbkey=CDS;gene=nusG;locus_tag=HP17_02838;product=transcription antitermination protein NusG;protein_id=EIE28893.1;transl_table=11 AIHX01000105.1 Genbank gene 32566 32991 . + . ID=gene-HP17_02843;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=HP17_02843 AIHX01000105.1 Genbank CDS 32566 32991 . + 0 ID=cds-EIE28894.1;Parent=gene-HP17_02843;Dbxref=NCBI_GP:EIE28894.1;Name=EIE28894.1;Note=COG0080 Ribosomal protein L11;gbkey=CDS;gene=rplK;locus_tag=HP17_02843;product=50S ribosomal protein L11;protein_id=EIE28894.1;transl_table=11 AIHX01000105.1 Genbank gene 33036 33740 . + . ID=gene-HP17_02848;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=HP17_02848 AIHX01000105.1 Genbank CDS 33036 33740 . + 0 ID=cds-EIE28895.1;Parent=gene-HP17_02848;Dbxref=NCBI_GP:EIE28895.1;Name=EIE28895.1;Note=COG0081 Ribosomal protein L1;gbkey=CDS;gene=rplA;locus_tag=HP17_02848;product=50S ribosomal protein L1;protein_id=EIE28895.1;transl_table=11 AIHX01000105.1 Genbank gene 33849 34343 . + . ID=gene-HP17_02853;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=HP17_02853 AIHX01000105.1 Genbank CDS 33849 34343 . + 0 ID=cds-EIE28896.1;Parent=gene-HP17_02853;Dbxref=NCBI_GP:EIE28896.1;Name=EIE28896.1;Note=COG0244 Ribosomal protein L10;gbkey=CDS;gene=rplJ;locus_tag=HP17_02853;product=50S ribosomal protein L10;protein_id=EIE28896.1;transl_table=11 AIHX01000105.1 Genbank gene 34388 34765 . + . ID=gene-HP17_02858;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HP17_02858 AIHX01000105.1 Genbank CDS 34388 34765 . + 0 ID=cds-EIE28897.1;Parent=gene-HP17_02858;Dbxref=NCBI_GP:EIE28897.1;Name=EIE28897.1;Note=COG0222 Ribosomal protein L7/L12;gbkey=CDS;gene=rplL;locus_tag=HP17_02858;product=50S ribosomal protein L7/L12;protein_id=EIE28897.1;transl_table=11 AIHX01000105.1 Genbank gene 34995 42505 . + . ID=gene-HP17_02863;Name=HP17_02863;end_range=42505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02863;partial=true AIHX01000105.1 Genbank CDS 34995 42505 . + 0 ID=cds-EIE28898.1;Parent=gene-HP17_02863;Dbxref=NCBI_GP:EIE28898.1;Name=EIE28898.1;Note=COG0085 DNA-directed RNA polymerase%2C beta subunit/140 kD subunit;end_range=42505,.;gbkey=CDS;locus_tag=HP17_02863;partial=true;product=bifunctional DNA-directed RNA polymerase subunit beta/beta';protein_id=EIE28898.1;transl_table=11 ##sequence-region AIHX01000106.1 1 1916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000106.1 Genbank region 1 1916 . + . ID=AIHX01000106.1:1..1916;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000106.1 Genbank gene 1 1122 . + . ID=gene-HP17_02882;Name=HP17_02882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02882;partial=true;start_range=.,1 AIHX01000106.1 Genbank CDS 1 1122 . + 0 ID=cds-EIE28841.1;Parent=gene-HP17_02882;Dbxref=NCBI_GP:EIE28841.1;Name=EIE28841.1;Note=COG0086 DNA-directed RNA polymerase%2C beta' subunit/160 kD subunit;gbkey=CDS;locus_tag=HP17_02882;partial=true;product=bifunctional DNA-directed RNA polymerase subunit beta/beta';protein_id=EIE28841.1;start_range=.,1;transl_table=11 AIHX01000106.1 Genbank gene 1210 1617 . + . ID=gene-HP17_02887;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=HP17_02887 AIHX01000106.1 Genbank CDS 1210 1617 . + 0 ID=cds-EIE28842.1;Parent=gene-HP17_02887;Dbxref=NCBI_GP:EIE28842.1;Name=EIE28842.1;Note=COG0048 Ribosomal protein S12;gbkey=CDS;gene=rpsL;locus_tag=HP17_02887;product=30S ribosomal protein S12;protein_id=EIE28842.1;transl_table=11 AIHX01000106.1 Genbank gene 1633 1916 . + . ID=gene-HP17_02892;Name=HP17_02892;end_range=1916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02892;partial=true AIHX01000106.1 Genbank CDS 1633 1916 . + 0 ID=cds-EIE28843.1;Parent=gene-HP17_02892;Dbxref=NCBI_GP:EIE28843.1;Name=EIE28843.1;Note=COG0049 Ribosomal protein S7;end_range=1916,.;gbkey=CDS;locus_tag=HP17_02892;partial=true;product=30S ribosomal protein S7;protein_id=EIE28843.1;transl_table=11 ##sequence-region AIHX01000107.1 1 7172 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000107.1 Genbank region 1 7172 . + . ID=AIHX01000107.1:1..7172;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000107.1 Genbank gene 1 181 . + . ID=gene-HP17_02897;Name=HP17_02897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02897;partial=true;start_range=.,1 AIHX01000107.1 Genbank CDS 1 181 . + 1 ID=cds-EIE28822.1;Parent=gene-HP17_02897;Dbxref=NCBI_GP:EIE28822.1;Name=EIE28822.1;Note=COG0049 Ribosomal protein S7;gbkey=CDS;locus_tag=HP17_02897;partial=true;product=30S ribosomal protein S7;protein_id=EIE28822.1;start_range=.,1;transl_table=11 AIHX01000107.1 Genbank gene 193 2271 . + . ID=gene-HP17_02902;Name=HP17_02902;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02902 AIHX01000107.1 Genbank CDS 193 2271 . + 0 ID=cds-EIE28823.1;Parent=gene-HP17_02902;Dbxref=NCBI_GP:EIE28823.1;Name=EIE28823.1;Note=COG0480 Translation elongation factors (GTPases);gbkey=CDS;locus_tag=HP17_02902;product=elongation factor G;protein_id=EIE28823.1;transl_table=11 AIHX01000107.1 Genbank pseudogene 2814 3715 . - . ID=gene-HP17_02907;Name=HP17_02907;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_02907;pseudo=true AIHX01000107.1 Genbank sequence_feature 2814 3715 . - . ID=id-HP17_02907;Note=potential frameshift: common BLAST hit: gi|210135352|ref|YP_002301791.1| aldo-keto reductase;gbkey=misc_feature;locus_tag=HP17_02907;pseudo=true AIHX01000107.1 Genbank gene 3697 3945 . - . ID=gene-HP17_02922;Name=HP17_02922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02922 AIHX01000107.1 Genbank CDS 3697 3945 . - 0 ID=cds-EIE28824.1;Parent=gene-HP17_02922;Dbxref=NCBI_GP:EIE28824.1;Name=EIE28824.1;gbkey=CDS;locus_tag=HP17_02922;product=Hypothetical protein;protein_id=EIE28824.1;transl_table=11 AIHX01000107.1 Genbank gene 3934 4098 . + . ID=gene-HP17_02927;Name=HP17_02927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02927 AIHX01000107.1 Genbank CDS 3934 4098 . + 0 ID=cds-EIE28825.1;Parent=gene-HP17_02927;Dbxref=NCBI_GP:EIE28825.1;Name=EIE28825.1;gbkey=CDS;locus_tag=HP17_02927;product=Hypothetical protein;protein_id=EIE28825.1;transl_table=11 AIHX01000107.1 Genbank gene 4282 5331 . - . ID=gene-HP17_02932;Name=HP17_02932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02932 AIHX01000107.1 Genbank CDS 4282 5331 . - 0 ID=cds-EIE28826.1;Parent=gene-HP17_02932;Dbxref=NCBI_GP:EIE28826.1;Name=EIE28826.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_02932;product=ADP-heptose--LPS heptosyltransferase II;protein_id=EIE28826.1;transl_table=11 AIHX01000107.1 Genbank gene 5393 6721 . + . ID=gene-HP17_02937;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=HP17_02937 AIHX01000107.1 Genbank CDS 5393 6721 . + 0 ID=cds-EIE28827.1;Parent=gene-HP17_02937;Dbxref=NCBI_GP:EIE28827.1;Name=EIE28827.1;Note=COG0124 Histidyl-tRNA synthetase;gbkey=CDS;gene=hisS;locus_tag=HP17_02937;product=histidyl-tRNA synthetase;protein_id=EIE28827.1;transl_table=11 AIHX01000107.1 Genbank gene 6708 7172 . + . ID=gene-HP17_02942;Name=HP17_02942;end_range=7172,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02942;partial=true AIHX01000107.1 Genbank CDS 6708 7172 . + 0 ID=cds-EIE28828.1;Parent=gene-HP17_02942;Dbxref=NCBI_GP:EIE28828.1;Name=EIE28828.1;Note=COG0136 Aspartate-semialdehyde dehydrogenase;end_range=7172,.;gbkey=CDS;locus_tag=HP17_02942;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=EIE28828.1;transl_table=11 ##sequence-region AIHX01000108.1 1 1464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000108.1 Genbank region 1 1464 . + . ID=AIHX01000108.1:1..1464;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000108.1 Genbank gene 1 542 . + . ID=gene-HP17_02947;Name=HP17_02947;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02947;partial=true;start_range=.,1 AIHX01000108.1 Genbank CDS 1 542 . + 2 ID=cds-EIE28819.1;Parent=gene-HP17_02947;Dbxref=NCBI_GP:EIE28819.1;Name=EIE28819.1;Note=COG0136 Aspartate-semialdehyde dehydrogenase;gbkey=CDS;locus_tag=HP17_02947;partial=true;product=aspartate-semialdehyde dehydrogenase;protein_id=EIE28819.1;start_range=.,1;transl_table=11 AIHX01000108.1 Genbank gene 956 1464 . + . ID=gene-HP17_02952;Name=HP17_02952;end_range=1464,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02952;partial=true AIHX01000108.1 Genbank CDS 956 1464 . + 0 ID=cds-EIE28820.1;Parent=gene-HP17_02952;Dbxref=NCBI_GP:EIE28820.1;Name=EIE28820.1;end_range=1464,.;gbkey=CDS;locus_tag=HP17_02952;partial=true;product=Hypothetical protein;protein_id=EIE28820.1;transl_table=11 ##sequence-region AIHX01000109.1 1 1728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000109.1 Genbank region 1 1728 . + . ID=AIHX01000109.1:1..1728;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000109.1 Genbank gene 1 1701 . - . ID=gene-HP17_02957;Name=HP17_02957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02957;partial=true;start_range=.,1 AIHX01000109.1 Genbank CDS 1 1701 . - 0 ID=cds-EIE28813.1;Parent=gene-HP17_02957;Dbxref=NCBI_GP:EIE28813.1;Name=EIE28813.1;gbkey=CDS;locus_tag=HP17_02957;partial=true;product=outer membrane protein;protein_id=EIE28813.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000110.1 1 210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000110.1 Genbank region 1 210 . + . ID=AIHX01000110.1:1..210;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000110.1 Genbank gene 1 126 . + . ID=gene-HP17_02962;Name=HP17_02962;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02962;partial=true;start_range=.,1 AIHX01000110.1 Genbank CDS 1 126 . + 0 ID=cds-EIE28796.1;Parent=gene-HP17_02962;Dbxref=NCBI_GP:EIE28796.1;Name=EIE28796.1;gbkey=CDS;locus_tag=HP17_02962;partial=true;product=Hypothetical protein;protein_id=EIE28796.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000111.1 1 5154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000111.1 Genbank region 1 5154 . + . ID=AIHX01000111.1:1..5154;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000111.1 Genbank gene 1 1229 . - . ID=gene-HP17_00250;Name=HP17_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00250;partial=true;start_range=.,1 AIHX01000111.1 Genbank CDS 1 1229 . - 0 ID=cds-EIE28789.1;Parent=gene-HP17_00250;Dbxref=NCBI_GP:EIE28789.1;Name=EIE28789.1;Note=COG0642 Signal transduction histidine kinase;gbkey=CDS;locus_tag=HP17_00250;partial=true;product=histidine kinase sensor protein;protein_id=EIE28789.1;start_range=.,1;transl_table=11 AIHX01000111.1 Genbank gene 1255 1932 . - . ID=gene-HP17_00255;Name=HP17_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00255 AIHX01000111.1 Genbank CDS 1255 1932 . - 0 ID=cds-EIE28790.1;Parent=gene-HP17_00255;Dbxref=NCBI_GP:EIE28790.1;Name=EIE28790.1;Note=COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain;gbkey=CDS;locus_tag=HP17_00255;product=response regulator OmpR;protein_id=EIE28790.1;transl_table=11 AIHX01000111.1 Genbank gene 2168 2644 . - . ID=gene-HP17_00260;Name=HP17_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00260 AIHX01000111.1 Genbank CDS 2168 2644 . - 0 ID=cds-EIE28791.1;Parent=gene-HP17_00260;Dbxref=NCBI_GP:EIE28791.1;Name=EIE28791.1;gbkey=CDS;locus_tag=HP17_00260;product=Hypothetical protein;protein_id=EIE28791.1;transl_table=11 AIHX01000111.1 Genbank gene 2635 2898 . - . ID=gene-HP17_00265;Name=HP17_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00265 AIHX01000111.1 Genbank CDS 2635 2898 . - 0 ID=cds-EIE28792.1;Parent=gene-HP17_00265;Dbxref=NCBI_GP:EIE28792.1;Name=EIE28792.1;Note=COG0457 FOG: TPR repeat;gbkey=CDS;locus_tag=HP17_00265;product=Hypothetical protein;protein_id=EIE28792.1;transl_table=11 AIHX01000111.1 Genbank gene 2932 4212 . - . ID=gene-HP17_00270;Name=HP17_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00270 AIHX01000111.1 Genbank CDS 2932 4212 . - 0 ID=cds-EIE28793.1;Parent=gene-HP17_00270;Dbxref=NCBI_GP:EIE28793.1;Name=EIE28793.1;Note=COG0826 Collagenase and related proteases;gbkey=CDS;locus_tag=HP17_00270;product=collagenase;protein_id=EIE28793.1;transl_table=11 AIHX01000111.1 Genbank gene 4215 4958 . - . ID=gene-HP17_00275;Name=HP17_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00275 AIHX01000111.1 Genbank CDS 4215 4958 . - 0 ID=cds-EIE28794.1;Parent=gene-HP17_00275;Dbxref=NCBI_GP:EIE28794.1;Name=EIE28794.1;gbkey=CDS;locus_tag=HP17_00275;product=Hypothetical protein;protein_id=EIE28794.1;transl_table=11 AIHX01000111.1 Genbank gene 5028 5154 . - . ID=gene-HP17_00280;Name=prfB;end_range=5154,.;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=HP17_00280;partial=true AIHX01000111.1 Genbank CDS 5028 5154 . - 1 ID=cds-EIE28795.1;Parent=gene-HP17_00280;Dbxref=NCBI_GP:EIE28795.1;Name=EIE28795.1;Note=COG1186 Protein chain release factor B;end_range=5154,.;gbkey=CDS;gene=prfB;locus_tag=HP17_00280;partial=true;product=peptide chain release factor 2;protein_id=EIE28795.1;transl_table=11 ##sequence-region AIHX01000112.1 1 2347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000112.1 Genbank region 1 2347 . + . ID=AIHX01000112.1:1..2347;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000112.1 Genbank gene 1 1273 . + . ID=gene-HP17_02967;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=HP17_02967;partial=true;start_range=.,1 AIHX01000112.1 Genbank CDS 1 1273 . + 1 ID=cds-EIE28778.1;Parent=gene-HP17_02967;Dbxref=NCBI_GP:EIE28778.1;Name=EIE28778.1;Note=COG0008 Glutamyl- and glutaminyl-tRNA synthetases;gbkey=CDS;gene=gltX;locus_tag=HP17_02967;partial=true;product=glutamyl-tRNA synthetase;protein_id=EIE28778.1;start_range=.,1;transl_table=11 AIHX01000112.1 Genbank gene 1388 2011 . - . ID=gene-HP17_02972;Name=HP17_02972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02972 AIHX01000112.1 Genbank CDS 1388 2011 . - 0 ID=cds-EIE28779.1;Parent=gene-HP17_02972;Dbxref=NCBI_GP:EIE28779.1;Name=EIE28779.1;Note=COG1118 ABC-type sulfate/molybdate transport systems%2C ATPase component;gbkey=CDS;locus_tag=HP17_02972;product=molybdenum ABC transporter ATP-binding protein (modD);protein_id=EIE28779.1;transl_table=11 AIHX01000112.1 Genbank gene 2183 2347 . - . ID=gene-HP17_02977;Name=HP17_02977;end_range=2347,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02977;partial=true AIHX01000112.1 Genbank CDS 2183 2347 . - 0 ID=cds-EIE28780.1;Parent=gene-HP17_02977;Dbxref=NCBI_GP:EIE28780.1;Name=EIE28780.1;end_range=2347,.;gbkey=CDS;locus_tag=HP17_02977;partial=true;product=molybdenum ABC transporter ModB;protein_id=EIE28780.1;transl_table=11 ##sequence-region AIHX01000113.1 1 2381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000113.1 Genbank region 1 2381 . + . ID=AIHX01000113.1:1..2381;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000113.1 Genbank gene 1 509 . - . ID=gene-HP17_02982;Name=HP17_02982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02982;partial=true;start_range=.,1 AIHX01000113.1 Genbank CDS 1 509 . - 0 ID=cds-EIE28773.1;Parent=gene-HP17_02982;Dbxref=NCBI_GP:EIE28773.1;Name=EIE28773.1;Note=COG4149 ABC-type molybdate transport system%2C permease component;gbkey=CDS;locus_tag=HP17_02982;partial=true;product=molybdenum ABC transporter ModB;protein_id=EIE28773.1;start_range=.,1;transl_table=11 AIHX01000113.1 Genbank gene 531 1271 . - . ID=gene-HP17_02987;Name=HP17_02987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02987 AIHX01000113.1 Genbank CDS 531 1271 . - 0 ID=cds-EIE28774.1;Parent=gene-HP17_02987;Dbxref=NCBI_GP:EIE28774.1;Name=EIE28774.1;Note=COG0725 ABC-type molybdate transport system%2C periplasmic component;gbkey=CDS;locus_tag=HP17_02987;product=molybdenum ABC transporter;protein_id=EIE28774.1;transl_table=11 AIHX01000113.1 Genbank gene 1494 2054 . + . ID=gene-HP17_02992;Name=HP17_02992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02992 AIHX01000113.1 Genbank CDS 1494 2054 . + 0 ID=cds-EIE28775.1;Parent=gene-HP17_02992;Dbxref=NCBI_GP:EIE28775.1;Name=EIE28775.1;gbkey=CDS;locus_tag=HP17_02992;product=Hypothetical protein;protein_id=EIE28775.1;transl_table=11 ##sequence-region AIHX01000114.1 1 9427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000114.1 Genbank region 1 9427 . + . ID=AIHX01000114.1:1..9427;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000114.1 Genbank gene 1 1129 . + . ID=gene-HP17_02997;Name=HP17_02997;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_02997;partial=true;start_range=.,1 AIHX01000114.1 Genbank CDS 1 1129 . + 1 ID=cds-EIE28761.1;Parent=gene-HP17_02997;Dbxref=NCBI_GP:EIE28761.1;Name=EIE28761.1;Note=COG0475 Kef-type K+ transport systems%2C membrane components;gbkey=CDS;locus_tag=HP17_02997;partial=true;product=glutathione-regulated potassium-efflux system protein;protein_id=EIE28761.1;start_range=.,1;transl_table=11 AIHX01000114.1 Genbank gene 1227 2963 . + . ID=gene-HP17_03002;Name=HP17_03002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03002 AIHX01000114.1 Genbank CDS 1227 2963 . + 0 ID=cds-EIE28762.1;Parent=gene-HP17_03002;Dbxref=NCBI_GP:EIE28762.1;Name=EIE28762.1;Note=COG1164 Oligoendopeptidase F;gbkey=CDS;locus_tag=HP17_03002;product=oligoendopeptidase F;protein_id=EIE28762.1;transl_table=11 AIHX01000114.1 Genbank gene 2948 3436 . + . ID=gene-HP17_03007;Name=HP17_03007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03007 AIHX01000114.1 Genbank CDS 2948 3436 . + 0 ID=cds-EIE28763.1;Parent=gene-HP17_03007;Dbxref=NCBI_GP:EIE28763.1;Name=EIE28763.1;gbkey=CDS;locus_tag=HP17_03007;product=Hypothetical protein;protein_id=EIE28763.1;transl_table=11 AIHX01000114.1 Genbank gene 3448 4935 . + . ID=gene-HP17_03012;Name=HP17_03012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03012 AIHX01000114.1 Genbank CDS 3448 4935 . + 0 ID=cds-EIE28764.1;Parent=gene-HP17_03012;Dbxref=NCBI_GP:EIE28764.1;Name=EIE28764.1;Note=COG2048 Heterodisulfide reductase%2C subunit B;gbkey=CDS;locus_tag=HP17_03012;product=Hypothetical protein;protein_id=EIE28764.1;transl_table=11 AIHX01000114.1 Genbank gene 4937 5251 . + . ID=gene-HP17_03017;Name=HP17_03017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03017 AIHX01000114.1 Genbank CDS 4937 5251 . + 0 ID=cds-EIE28765.1;Parent=gene-HP17_03017;Dbxref=NCBI_GP:EIE28765.1;Name=EIE28765.1;gbkey=CDS;locus_tag=HP17_03017;product=Hypothetical protein;protein_id=EIE28765.1;transl_table=11 AIHX01000114.1 Genbank gene 5261 6028 . + . ID=gene-HP17_03022;Name=HP17_03022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03022 AIHX01000114.1 Genbank CDS 5261 6028 . + 0 ID=cds-EIE28766.1;Parent=gene-HP17_03022;Dbxref=NCBI_GP:EIE28766.1;Name=EIE28766.1;gbkey=CDS;locus_tag=HP17_03022;product=Hypothetical protein;protein_id=EIE28766.1;transl_table=11 AIHX01000114.1 Genbank gene 6053 7948 . + . ID=gene-HP17_03027;Name=HP17_03027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03027 AIHX01000114.1 Genbank CDS 6053 7948 . + 0 ID=cds-EIE28767.1;Parent=gene-HP17_03027;Dbxref=NCBI_GP:EIE28767.1;Name=EIE28767.1;Note=COG2604 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_03027;product=Hypothetical protein;protein_id=EIE28767.1;transl_table=11 AIHX01000114.1 Genbank gene 7996 8616 . + . ID=gene-HP17_03032;Name=HP17_03032;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03032 AIHX01000114.1 Genbank CDS 7996 8616 . + 0 ID=cds-EIE28768.1;Parent=gene-HP17_03032;Dbxref=NCBI_GP:EIE28768.1;Name=EIE28768.1;Note=COG0610 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases;gbkey=CDS;locus_tag=HP17_03032;product=type I restriction enzyme R protein (hsdR);protein_id=EIE28768.1;transl_table=11 AIHX01000114.1 Genbank gene 8843 9418 . + . ID=gene-HP17_03037;Name=HP17_03037;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03037 AIHX01000114.1 Genbank CDS 8843 9418 . + 0 ID=cds-EIE28769.1;Parent=gene-HP17_03037;Dbxref=NCBI_GP:EIE28769.1;Name=EIE28769.1;Note=COG0610 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases;gbkey=CDS;locus_tag=HP17_03037;product=type I restriction enzyme R protein;protein_id=EIE28769.1;transl_table=11 ##sequence-region AIHX01000115.1 1 5400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000115.1 Genbank region 1 5400 . + . ID=AIHX01000115.1:1..5400;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000115.1 Genbank gene 228 971 . - . ID=gene-HP17_03042;Name=HP17_03042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03042 AIHX01000115.1 Genbank CDS 228 971 . - 0 ID=cds-EIE28755.1;Parent=gene-HP17_03042;Dbxref=NCBI_GP:EIE28755.1;Name=EIE28755.1;Note=COG3338 Carbonic anhydrase;gbkey=CDS;locus_tag=HP17_03042;product=alpha-carbonic anhydrase;protein_id=EIE28755.1;transl_table=11 AIHX01000115.1 Genbank gene 1248 2423 . + . ID=gene-HP17_03047;Name=HP17_03047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03047 AIHX01000115.1 Genbank CDS 1248 2423 . + 0 ID=cds-EIE28756.1;Parent=gene-HP17_03047;Dbxref=NCBI_GP:EIE28756.1;Name=EIE28756.1;Note=COG2814 Arabinose efflux permease;gbkey=CDS;locus_tag=HP17_03047;product=putative arabinose transporter;protein_id=EIE28756.1;transl_table=11 AIHX01000115.1 Genbank gene 2590 3969 . + . ID=gene-HP17_03052;Name=HP17_03052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03052 AIHX01000115.1 Genbank CDS 2590 3969 . + 0 ID=cds-EIE28757.1;Parent=gene-HP17_03052;Dbxref=NCBI_GP:EIE28757.1;Name=EIE28757.1;Note=COG0534 Na+-driven multidrug efflux pump;gbkey=CDS;locus_tag=HP17_03052;product=Hypothetical protein;protein_id=EIE28757.1;transl_table=11 AIHX01000115.1 Genbank gene 3995 5146 . + . ID=gene-HP17_03057;Name=HP17_03057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03057 AIHX01000115.1 Genbank CDS 3995 5146 . + 0 ID=cds-EIE28758.1;Parent=gene-HP17_03057;Dbxref=NCBI_GP:EIE28758.1;Name=EIE28758.1;Note=COG0475 Kef-type K+ transport systems%2C membrane components;gbkey=CDS;locus_tag=HP17_03057;product=Na+/H+ antiporter;protein_id=EIE28758.1;transl_table=11 AIHX01000115.1 Genbank gene 5155 5400 . - . ID=gene-HP17_03062;Name=HP17_03062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03062 AIHX01000115.1 Genbank CDS 5155 5400 . - 0 ID=cds-EIE28759.1;Parent=gene-HP17_03062;Dbxref=NCBI_GP:EIE28759.1;Name=EIE28759.1;gbkey=CDS;locus_tag=HP17_03062;product=PP-loop family ATPase;protein_id=EIE28759.1;transl_table=11 ##sequence-region AIHX01000116.1 1 6433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000116.1 Genbank region 1 6433 . + . ID=AIHX01000116.1:1..6433;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000116.1 Genbank gene 1 485 . - . ID=gene-HP17_03067;Name=HP17_03067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03067;partial=true;start_range=.,1 AIHX01000116.1 Genbank CDS 1 485 . - 0 ID=cds-EIE28746.1;Parent=gene-HP17_03067;Dbxref=NCBI_GP:EIE28746.1;Name=EIE28746.1;Note=COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control;gbkey=CDS;locus_tag=HP17_03067;partial=true;product=putative PP-loop family ATPase;protein_id=EIE28746.1;start_range=.,1;transl_table=11 AIHX01000116.1 Genbank gene 505 1836 . - . ID=gene-HP17_03072;Name=HP17_03072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03072 AIHX01000116.1 Genbank CDS 505 1836 . - 0 ID=cds-EIE28747.1;Parent=gene-HP17_03072;Dbxref=NCBI_GP:EIE28747.1;Name=EIE28747.1;Note=COG0477 Permeases of the major facilitator superfamily;gbkey=CDS;locus_tag=HP17_03072;product=multidrug-efflux transporter;protein_id=EIE28747.1;transl_table=11 AIHX01000116.1 Genbank gene 1970 2047 . + . ID=gene-HP17_t03109;Name=HP17_t03109;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t03109 AIHX01000116.1 Genbank tRNA 1970 2047 . + . ID=rna-HP17_t03109;Parent=gene-HP17_t03109;gbkey=tRNA;locus_tag=HP17_t03109;product=tRNA-Met AIHX01000116.1 Genbank exon 1970 2047 . + . ID=exon-HP17_t03109-1;Parent=rna-HP17_t03109;gbkey=tRNA;locus_tag=HP17_t03109;product=tRNA-Met AIHX01000116.1 Genbank gene 2152 3408 . + . ID=gene-HP17_03077;Name=HP17_03077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03077 AIHX01000116.1 Genbank CDS 2152 3408 . + 0 ID=cds-EIE28748.1;Parent=gene-HP17_03077;Dbxref=NCBI_GP:EIE28748.1;Name=EIE28748.1;Note=COG1972 Nucleoside permease;gbkey=CDS;locus_tag=HP17_03077;product=nucleoside transporter;protein_id=EIE28748.1;transl_table=11 AIHX01000116.1 Genbank gene 3420 4661 . + . ID=gene-HP17_03082;Name=HP17_03082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03082 AIHX01000116.1 Genbank CDS 3420 4661 . + 0 ID=cds-EIE28749.1;Parent=gene-HP17_03082;Dbxref=NCBI_GP:EIE28749.1;Name=EIE28749.1;Note=COG1015 Phosphopentomutase;gbkey=CDS;locus_tag=HP17_03082;product=phosphopentomutase;protein_id=EIE28749.1;transl_table=11 AIHX01000116.1 Genbank gene 4658 5359 . + . ID=gene-HP17_03087;Name=HP17_03087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03087 AIHX01000116.1 Genbank CDS 4658 5359 . + 0 ID=cds-EIE28750.1;Parent=gene-HP17_03087;Dbxref=NCBI_GP:EIE28750.1;Name=EIE28750.1;Note=COG0813 Purine-nucleoside phosphorylase;gbkey=CDS;locus_tag=HP17_03087;product=purine-nucleoside phosphorylase;protein_id=EIE28750.1;transl_table=11 AIHX01000116.1 Genbank gene 5481 5573 . - . ID=gene-HP17_03092;Name=HP17_03092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03092 AIHX01000116.1 Genbank CDS 5481 5573 . - 0 ID=cds-EIE28751.1;Parent=gene-HP17_03092;Dbxref=NCBI_GP:EIE28751.1;Name=EIE28751.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_03092;product=Hypothetical protein;protein_id=EIE28751.1;transl_table=11 AIHX01000116.1 Genbank gene 5800 6051 . + . ID=gene-HP17_03097;Name=HP17_03097;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03097 AIHX01000116.1 Genbank CDS 5800 6051 . + 0 ID=cds-EIE28752.1;Parent=gene-HP17_03097;Dbxref=NCBI_GP:EIE28752.1;Name=EIE28752.1;gbkey=CDS;locus_tag=HP17_03097;product=Hypothetical protein;protein_id=EIE28752.1;transl_table=11 AIHX01000116.1 Genbank gene 6183 6433 . + . ID=gene-HP17_03102;Name=HP17_03102;end_range=6433,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03102;partial=true AIHX01000116.1 Genbank CDS 6183 6433 . + 0 ID=cds-EIE28753.1;Parent=gene-HP17_03102;Dbxref=NCBI_GP:EIE28753.1;Name=EIE28753.1;end_range=6433,.;gbkey=CDS;locus_tag=HP17_03102;partial=true;product=outer membrane protein (omp27);protein_id=EIE28753.1;transl_table=11 ##sequence-region AIHX01000117.1 1 5474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000117.1 Genbank region 1 5474 . + . ID=AIHX01000117.1:1..5474;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000117.1 Genbank gene 1 900 . + . ID=gene-HP17_03109;Name=HP17_03109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03109;partial=true;start_range=.,1 AIHX01000117.1 Genbank CDS 1 900 . + 0 ID=cds-EIE28721.1;Parent=gene-HP17_03109;Dbxref=NCBI_GP:EIE28721.1;Name=EIE28721.1;gbkey=CDS;locus_tag=HP17_03109;partial=true;product=Hypothetical protein;protein_id=EIE28721.1;start_range=.,1;transl_table=11 AIHX01000117.1 Genbank gene 992 1297 . + . ID=gene-HP17_03114;Name=HP17_03114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03114 AIHX01000117.1 Genbank CDS 992 1297 . + 0 ID=cds-EIE28722.1;Parent=gene-HP17_03114;Dbxref=NCBI_GP:EIE28722.1;Name=EIE28722.1;Note=COG0621 2-methylthioadenine synthetase;gbkey=CDS;locus_tag=HP17_03114;product=Hypothetical protein;protein_id=EIE28722.1;transl_table=11 AIHX01000117.1 Genbank gene 1306 2373 . + . ID=gene-HP17_03119;Name=HP17_03119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03119 AIHX01000117.1 Genbank CDS 1306 2373 . + 0 ID=cds-EIE28723.1;Parent=gene-HP17_03119;Dbxref=NCBI_GP:EIE28723.1;Name=EIE28723.1;gbkey=CDS;locus_tag=HP17_03119;product=Hypothetical protein;protein_id=EIE28723.1;transl_table=11 AIHX01000117.1 Genbank gene 2366 3433 . + . ID=gene-HP17_03124;Name=HP17_03124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03124 AIHX01000117.1 Genbank CDS 2366 3433 . + 0 ID=cds-EIE28724.1;Parent=gene-HP17_03124;Dbxref=NCBI_GP:EIE28724.1;Name=EIE28724.1;Note=COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control;gbkey=CDS;locus_tag=HP17_03124;product=tRNA(Ile)-lysidine synthase;protein_id=EIE28724.1;transl_table=11 AIHX01000117.1 Genbank gene 3527 4513 . + . ID=gene-HP17_03129;Name=HP17_03129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03129 AIHX01000117.1 Genbank CDS 3527 4513 . + 0 ID=cds-EIE28725.1;Parent=gene-HP17_03129;Dbxref=NCBI_GP:EIE28725.1;Name=EIE28725.1;Note=COG0042 tRNA-dihydrouridine synthase;gbkey=CDS;locus_tag=HP17_03129;product=tRNA-dihydrouridine synthase B;protein_id=EIE28725.1;transl_table=11 AIHX01000117.1 Genbank gene 4483 5400 . + . ID=gene-HP17_03134;Name=HP17_03134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03134 AIHX01000117.1 Genbank CDS 4483 5400 . + 0 ID=cds-EIE28726.1;Parent=gene-HP17_03134;Dbxref=NCBI_GP:EIE28726.1;Name=EIE28726.1;gbkey=CDS;locus_tag=HP17_03134;product=Hypothetical protein;protein_id=EIE28726.1;transl_table=11 ##sequence-region AIHX01000118.1 1 1571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000118.1 Genbank region 1 1571 . + . ID=AIHX01000118.1:1..1571;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000118.1 Genbank gene 1 1571 . + . ID=gene-HP17_03139;Name=HP17_03139;end_range=1571,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03139;partial=true;start_range=.,1 AIHX01000118.1 Genbank CDS 1 1571 . + 2 ID=cds-EIE28713.1;Parent=gene-HP17_03139;Dbxref=NCBI_GP:EIE28713.1;Name=EIE28713.1;end_range=1571,.;gbkey=CDS;locus_tag=HP17_03139;partial=true;product=outer membrane protein HopQ;protein_id=EIE28713.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000119.1 1 8560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000119.1 Genbank region 1 8560 . + . ID=AIHX01000119.1:1..8560;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000119.1 Genbank gene 2 109 . + . ID=gene-HP17_03144;Name=HP17_03144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03144 AIHX01000119.1 Genbank CDS 2 109 . + 0 ID=cds-EIE28703.1;Parent=gene-HP17_03144;Dbxref=NCBI_GP:EIE28703.1;Name=EIE28703.1;gbkey=CDS;locus_tag=HP17_03144;product=Hypothetical protein;protein_id=EIE28703.1;transl_table=11 AIHX01000119.1 Genbank gene 281 880 . + . ID=gene-HP17_03149;Name=HP17_03149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03149 AIHX01000119.1 Genbank CDS 281 880 . + 0 ID=cds-EIE28704.1;Parent=gene-HP17_03149;Dbxref=NCBI_GP:EIE28704.1;Name=EIE28704.1;gbkey=CDS;locus_tag=HP17_03149;product=CAG pathogenicity island protein S;protein_id=EIE28704.1;transl_table=11 AIHX01000119.1 Genbank gene 1077 1919 . - . ID=gene-HP17_03154;Name=HP17_03154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03154 AIHX01000119.1 Genbank CDS 1077 1919 . - 0 ID=cds-EIE28705.1;Parent=gene-HP17_03154;Dbxref=NCBI_GP:EIE28705.1;Name=EIE28705.1;gbkey=CDS;locus_tag=HP17_03154;product=CAG pathogenicity island protein T;protein_id=EIE28705.1;transl_table=11 AIHX01000119.1 Genbank gene 1932 2582 . - . ID=gene-HP17_03159;Name=HP17_03159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03159 AIHX01000119.1 Genbank CDS 1932 2582 . - 0 ID=cds-EIE28706.1;Parent=gene-HP17_03159;Dbxref=NCBI_GP:EIE28706.1;Name=EIE28706.1;gbkey=CDS;locus_tag=HP17_03159;product=cag pathogenicity island protein U;protein_id=EIE28706.1;transl_table=11 AIHX01000119.1 Genbank gene 2962 3720 . + . ID=gene-HP17_03164;Name=HP17_03164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03164 AIHX01000119.1 Genbank CDS 2962 3720 . + 0 ID=cds-EIE28707.1;Parent=gene-HP17_03164;Dbxref=NCBI_GP:EIE28707.1;Name=EIE28707.1;Note=COG3736 Type IV secretory pathway%2C component VirB8;gbkey=CDS;locus_tag=HP17_03164;product=cag pathogenicity island protein V;protein_id=EIE28707.1;transl_table=11 AIHX01000119.1 Genbank gene 3725 5332 . + . ID=gene-HP17_03169;Name=HP17_03169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03169 AIHX01000119.1 Genbank CDS 3725 5332 . + 0 ID=cds-EIE28708.1;Parent=gene-HP17_03169;Dbxref=NCBI_GP:EIE28708.1;Name=EIE28708.1;gbkey=CDS;locus_tag=HP17_03169;product=cag pathogenicity island protein W;protein_id=EIE28708.1;transl_table=11 AIHX01000119.1 Genbank gene 5385 6953 . + . ID=gene-HP17_03174;Name=HP17_03174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03174 AIHX01000119.1 Genbank CDS 5385 6953 . + 0 ID=cds-EIE28709.1;Parent=gene-HP17_03174;Dbxref=NCBI_GP:EIE28709.1;Name=EIE28709.1;Note=COG3504 Type IV secretory pathway%2C VirB9 components;gbkey=CDS;locus_tag=HP17_03174;product=cag pathogenicity island protein X;protein_id=EIE28709.1;transl_table=11 AIHX01000119.1 Genbank gene 6968 8560 . + . ID=gene-HP17_03179;Name=HP17_03179;end_range=8560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03179;partial=true AIHX01000119.1 Genbank CDS 6968 8560 . + 0 ID=cds-EIE28710.1;Parent=gene-HP17_03179;Dbxref=NCBI_GP:EIE28710.1;Name=EIE28710.1;end_range=8560,.;gbkey=CDS;locus_tag=HP17_03179;partial=true;product=cag pathogenicity island protein Y VirB10-like protein;protein_id=EIE28710.1;transl_table=11 ##sequence-region AIHX01000120.1 1 441 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000120.1 Genbank region 1 441 . + . ID=AIHX01000120.1:1..441;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000120.1 Genbank gene 1 441 . + . ID=gene-HP17_03184;Name=HP17_03184;end_range=441,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03184;partial=true;start_range=.,1 AIHX01000120.1 Genbank CDS 1 441 . + 1 ID=cds-EIE28701.1;Parent=gene-HP17_03184;Dbxref=NCBI_GP:EIE28701.1;Name=EIE28701.1;end_range=441,.;gbkey=CDS;locus_tag=HP17_03184;partial=true;product=cag pathogenicity island protein Y VirB10-like protein;protein_id=EIE28701.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000121.1 1 7957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000121.1 Genbank region 1 7957 . + . ID=AIHX01000121.1:1..7957;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000121.1 Genbank gene 1 523 . - . ID=gene-HP17_03189;Name=HP17_03189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03189;partial=true;start_range=.,1 AIHX01000121.1 Genbank CDS 1 523 . - 0 ID=cds-EIE28689.1;Parent=gene-HP17_03189;Dbxref=NCBI_GP:EIE28689.1;Name=EIE28689.1;Note=COG0732 Restriction endonuclease S subunits;gbkey=CDS;locus_tag=HP17_03189;partial=true;product=putative type I restriction-modification enzyme specificity subunit S;protein_id=EIE28689.1;start_range=.,1;transl_table=11 AIHX01000121.1 Genbank gene 516 2123 . - . ID=gene-HP17_03194;Name=HP17_03194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03194 AIHX01000121.1 Genbank CDS 516 2123 . - 0 ID=cds-EIE28690.1;Parent=gene-HP17_03194;Dbxref=NCBI_GP:EIE28690.1;Name=EIE28690.1;Note=COG0286 Type I restriction-modification system methyltransferase subunit;gbkey=CDS;locus_tag=HP17_03194;product=type I restriction enzyme M protein;protein_id=EIE28690.1;transl_table=11 AIHX01000121.1 Genbank gene 2095 2280 . - . ID=gene-HP17_03199;Name=HP17_03199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03199 AIHX01000121.1 Genbank CDS 2095 2280 . - 0 ID=cds-EIE28691.1;Parent=gene-HP17_03199;Dbxref=NCBI_GP:EIE28691.1;Name=EIE28691.1;gbkey=CDS;locus_tag=HP17_03199;product=Hypothetical protein;protein_id=EIE28691.1;transl_table=11 AIHX01000121.1 Genbank gene 2305 2991 . + . ID=gene-HP17_03204;Name=HP17_03204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03204 AIHX01000121.1 Genbank CDS 2305 2991 . + 0 ID=cds-EIE28692.1;Parent=gene-HP17_03204;Dbxref=NCBI_GP:EIE28692.1;Name=EIE28692.1;Note=COG0671 Membrane-associated phospholipid phosphatase;gbkey=CDS;locus_tag=HP17_03204;product=integral membrane protein;protein_id=EIE28692.1;transl_table=11 AIHX01000121.1 Genbank gene 3115 3942 . - . ID=gene-HP17_03209;Name=HP17_03209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03209 AIHX01000121.1 Genbank CDS 3115 3942 . - 0 ID=cds-EIE28693.1;Parent=gene-HP17_03209;Dbxref=NCBI_GP:EIE28693.1;Name=EIE28693.1;Note=COG2958 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_03209;product=Hypothetical protein;protein_id=EIE28693.1;transl_table=11 AIHX01000121.1 Genbank gene 3939 5540 . - . ID=gene-HP17_03214;Name=HP17_03214;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03214 AIHX01000121.1 Genbank CDS 3939 5540 . - 0 ID=cds-EIE28694.1;Parent=gene-HP17_03214;Dbxref=NCBI_GP:EIE28694.1;Name=EIE28694.1;Note=COG0488 ATPase components of ABC transporters with duplicated ATPase domains;gbkey=CDS;locus_tag=HP17_03214;product=ABC transporter%2C ATP-binding protein;protein_id=EIE28694.1;transl_table=11 AIHX01000121.1 Genbank gene 5738 6715 . + . ID=gene-HP17_03219;Name=HP17_03219;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03219 AIHX01000121.1 Genbank CDS 5738 6715 . + 0 ID=cds-EIE28695.1;Parent=gene-HP17_03219;Dbxref=NCBI_GP:EIE28695.1;Name=EIE28695.1;Note=COG0516 IMP dehydrogenase/GMP reductase;gbkey=CDS;locus_tag=HP17_03219;product=guanosine 5'-monophosphate oxidoreductase;protein_id=EIE28695.1;transl_table=11 AIHX01000121.1 Genbank gene 6696 6899 . - . ID=gene-HP17_03224;Name=HP17_03224;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03224 AIHX01000121.1 Genbank CDS 6696 6899 . - 0 ID=cds-EIE28696.1;Parent=gene-HP17_03224;Dbxref=NCBI_GP:EIE28696.1;Name=EIE28696.1;gbkey=CDS;locus_tag=HP17_03224;product=Hypothetical protein;protein_id=EIE28696.1;transl_table=11 AIHX01000121.1 Genbank gene 6871 7449 . - . ID=gene-HP17_03229;Name=HP17_03229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03229 AIHX01000121.1 Genbank CDS 6871 7449 . - 0 ID=cds-EIE28697.1;Parent=gene-HP17_03229;Dbxref=NCBI_GP:EIE28697.1;Name=EIE28697.1;Note=COG0279 Phosphoheptose isomerase;gbkey=CDS;locus_tag=HP17_03229;product=phosphoheptose isomerase;protein_id=EIE28697.1;transl_table=11 AIHX01000121.1 Genbank gene 7442 7957 . - . ID=gene-HP17_03234;Name=HP17_03234;end_range=7957,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03234;partial=true AIHX01000121.1 Genbank CDS 7442 7957 . - 0 ID=cds-EIE28698.1;Parent=gene-HP17_03234;Dbxref=NCBI_GP:EIE28698.1;Name=EIE28698.1;Note=COG2870 ADP-heptose synthase%2C bifunctional sugar kinase/adenylyltransferase;end_range=7957,.;gbkey=CDS;locus_tag=HP17_03234;partial=true;product=ADP-heptose synthase;protein_id=EIE28698.1;transl_table=11 ##sequence-region AIHX01000122.1 1 3946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000122.1 Genbank region 1 3946 . + . ID=AIHX01000122.1:1..3946;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000122.1 Genbank gene 1 934 . - . ID=gene-HP17_00285;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=HP17_00285;partial=true;start_range=.,1 AIHX01000122.1 Genbank CDS 1 934 . - 0 ID=cds-EIE28678.1;Parent=gene-HP17_00285;Dbxref=NCBI_GP:EIE28678.1;Name=EIE28678.1;Note=COG1186 Protein chain release factor B;gbkey=CDS;gene=prfB;locus_tag=HP17_00285;partial=true;product=peptide chain release factor 2;protein_id=EIE28678.1;start_range=.,1;transl_table=11 AIHX01000122.1 Genbank gene 995 2170 . - . ID=gene-HP17_00290;Name=HP17_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00290 AIHX01000122.1 Genbank CDS 995 2170 . - 0 ID=cds-EIE28679.1;Parent=gene-HP17_00290;Dbxref=NCBI_GP:EIE28679.1;Name=EIE28679.1;Note=COG0303 Molybdopterin biosynthesis enzyme;gbkey=CDS;locus_tag=HP17_00290;product=molybdopterin biosynthesis protein;protein_id=EIE28679.1;transl_table=11 AIHX01000122.1 Genbank gene 2180 2947 . - . ID=gene-HP17_00295;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=HP17_00295 AIHX01000122.1 Genbank CDS 2180 2947 . - 0 ID=cds-EIE28680.1;Parent=gene-HP17_00295;Dbxref=NCBI_GP:EIE28680.1;Name=EIE28680.1;Note=COG1684 Flagellar biosynthesis pathway%2C component FliR;gbkey=CDS;gene=fliR;locus_tag=HP17_00295;product=flagellar biosynthesis protein FliR;protein_id=EIE28680.1;transl_table=11 AIHX01000122.1 Genbank gene 2941 3669 . - . ID=gene-HP17_00300;Name=HP17_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00300 AIHX01000122.1 Genbank CDS 2941 3669 . - 0 ID=cds-EIE28681.1;Parent=gene-HP17_00300;Dbxref=NCBI_GP:EIE28681.1;Name=EIE28681.1;gbkey=CDS;locus_tag=HP17_00300;product=Hypothetical protein;protein_id=EIE28681.1;transl_table=11 AIHX01000122.1 Genbank gene 3778 3946 . - . ID=gene-HP17_00305;Name=HP17_00305;end_range=3946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00305;partial=true AIHX01000122.1 Genbank CDS 3778 3946 . - 1 ID=cds-EIE28682.1;Parent=gene-HP17_00305;Dbxref=NCBI_GP:EIE28682.1;Name=EIE28682.1;end_range=3946,.;gbkey=CDS;locus_tag=HP17_00305;partial=true;product=Hypothetical protein;protein_id=EIE28682.1;transl_table=11 ##sequence-region AIHX01000123.1 1 9217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000123.1 Genbank region 1 9217 . + . ID=AIHX01000123.1:1..9217;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000123.1 Genbank gene 1 835 . - . ID=gene-HP17_03239;Name=HP17_03239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03239;partial=true;start_range=.,1 AIHX01000123.1 Genbank CDS 1 835 . - 0 ID=cds-EIE28659.1;Parent=gene-HP17_03239;Dbxref=NCBI_GP:EIE28659.1;Name=EIE28659.1;Note=COG2870 ADP-heptose synthase%2C bifunctional sugar kinase/adenylyltransferase;gbkey=CDS;locus_tag=HP17_03239;partial=true;product=ADP-heptose synthase;protein_id=EIE28659.1;start_range=.,1;transl_table=11 AIHX01000123.1 Genbank gene 832 1824 . - . ID=gene-HP17_03244;Name=HP17_03244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03244 AIHX01000123.1 Genbank CDS 832 1824 . - 0 ID=cds-EIE28660.1;Parent=gene-HP17_03244;Dbxref=NCBI_GP:EIE28660.1;Name=EIE28660.1;Note=COG0451 Nucleoside-diphosphate-sugar epimerases;gbkey=CDS;locus_tag=HP17_03244;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=EIE28660.1;transl_table=11 AIHX01000123.1 Genbank gene 1833 2354 . - . ID=gene-HP17_03249;Name=HP17_03249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03249 AIHX01000123.1 Genbank CDS 1833 2354 . - 0 ID=cds-EIE28661.1;Parent=gene-HP17_03249;Dbxref=NCBI_GP:EIE28661.1;Name=EIE28661.1;Note=COG0241 Histidinol phosphatase and related phosphatases;gbkey=CDS;locus_tag=HP17_03249;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=EIE28661.1;transl_table=11 AIHX01000123.1 Genbank gene 2344 3084 . - . ID=gene-HP17_03254;Name=HP17_03254;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03254 AIHX01000123.1 Genbank CDS 2344 3084 . - 0 ID=cds-EIE28662.1;Parent=gene-HP17_03254;Dbxref=NCBI_GP:EIE28662.1;Name=EIE28662.1;Note=COG2836 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_03254;product=Hypothetical protein;protein_id=EIE28662.1;transl_table=11 AIHX01000123.1 Genbank gene 3075 3746 . - . ID=gene-HP17_03259;Name=HP17_03259;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03259 AIHX01000123.1 Genbank CDS 3075 3746 . - 0 ID=cds-EIE28663.1;Parent=gene-HP17_03259;Dbxref=NCBI_GP:EIE28663.1;Name=EIE28663.1;Note=COG1521 Putative transcriptional regulator%2C homolog of Bvg accessory factor;gbkey=CDS;locus_tag=HP17_03259;product=pantothenate kinase;protein_id=EIE28663.1;transl_table=11 AIHX01000123.1 Genbank gene 3751 5418 . - . ID=gene-HP17_03264;Name=HP17_03264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03264 AIHX01000123.1 Genbank CDS 3751 5418 . - 0 ID=cds-EIE28664.1;Parent=gene-HP17_03264;Dbxref=NCBI_GP:EIE28664.1;Name=EIE28664.1;gbkey=CDS;locus_tag=HP17_03264;product=Hypothetical protein;protein_id=EIE28664.1;transl_table=11 AIHX01000123.1 Genbank gene 5423 6079 . - . ID=gene-HP17_03269;Name=HP17_03269;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03269 AIHX01000123.1 Genbank CDS 5423 6079 . - 0 ID=cds-EIE28665.1;Parent=gene-HP17_03269;Dbxref=NCBI_GP:EIE28665.1;Name=EIE28665.1;gbkey=CDS;locus_tag=HP17_03269;product=Hypothetical protein;protein_id=EIE28665.1;transl_table=11 AIHX01000123.1 Genbank gene 6076 6513 . - . ID=gene-HP17_03274;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=HP17_03274 AIHX01000123.1 Genbank CDS 6076 6513 . - 0 ID=cds-EIE28666.1;Parent=gene-HP17_03274;Dbxref=NCBI_GP:EIE28666.1;Name=EIE28666.1;Note=COG0756 dUTPase;gbkey=CDS;gene=dut;locus_tag=HP17_03274;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=EIE28666.1;transl_table=11 AIHX01000123.1 Genbank gene 6503 6997 . - . ID=gene-HP17_03279;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=HP17_03279 AIHX01000123.1 Genbank CDS 6503 6997 . - 0 ID=cds-EIE28667.1;Parent=gene-HP17_03279;Dbxref=NCBI_GP:EIE28667.1;Name=EIE28667.1;Note=COG0782 Transcription elongation factor;gbkey=CDS;gene=greA;locus_tag=HP17_03279;product=transcription elongation factor GreA;protein_id=EIE28667.1;transl_table=11 AIHX01000123.1 Genbank gene 7038 8120 . - . ID=gene-HP17_03284;Name=HP17_03284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03284 AIHX01000123.1 Genbank CDS 7038 8120 . - 0 ID=cds-EIE28668.1;Parent=gene-HP17_03284;Dbxref=NCBI_GP:EIE28668.1;Name=EIE28668.1;Note=COG0763 Lipid A disaccharide synthetase;gbkey=CDS;locus_tag=HP17_03284;product=ipid-A-disaccharide synthase;protein_id=EIE28668.1;transl_table=11 AIHX01000123.1 Genbank gene 8120 8581 . - . ID=gene-HP17_03289;Name=HP17_03289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03289 AIHX01000123.1 Genbank CDS 8120 8581 . - 0 ID=cds-EIE28669.1;Parent=gene-HP17_03289;Dbxref=NCBI_GP:EIE28669.1;Name=EIE28669.1;gbkey=CDS;locus_tag=HP17_03289;product=Hypothetical protein;protein_id=EIE28669.1;transl_table=11 AIHX01000123.1 Genbank gene 8588 8941 . - . ID=gene-HP17_03294;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=HP17_03294 AIHX01000123.1 Genbank CDS 8588 8941 . - 0 ID=cds-EIE28670.1;Parent=gene-HP17_03294;Dbxref=NCBI_GP:EIE28670.1;Name=EIE28670.1;Note=COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression);gbkey=CDS;gene=hypA;locus_tag=HP17_03294;product=hydrogenase nickel incorporation protein;protein_id=EIE28670.1;transl_table=11 AIHX01000123.1 Genbank gene 9000 9217 . - . ID=gene-HP17_03299;Name=flgE;end_range=9217,.;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=HP17_03299;partial=true AIHX01000123.1 Genbank CDS 9000 9217 . - 2 ID=cds-EIE28671.1;Parent=gene-HP17_03299;Dbxref=NCBI_GP:EIE28671.1;Name=EIE28671.1;Note=COG1749 Flagellar hook protein FlgE;end_range=9217,.;gbkey=CDS;gene=flgE;locus_tag=HP17_03299;partial=true;product=flagellar hook protein FlgE;protein_id=EIE28671.1;transl_table=11 ##sequence-region AIHX01000124.1 1 284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000124.1 Genbank region 1 284 . + . ID=AIHX01000124.1:1..284;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000124.1 Genbank gene 1 284 . - . ID=gene-HP17_03304;Name=flgE;end_range=284,.;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=HP17_03304;partial=true;start_range=.,1 AIHX01000124.1 Genbank CDS 1 284 . - 0 ID=cds-EIE28657.1;Parent=gene-HP17_03304;Dbxref=NCBI_GP:EIE28657.1;Name=EIE28657.1;Note=COG1749 Flagellar hook protein FlgE;end_range=284,.;gbkey=CDS;gene=flgE;locus_tag=HP17_03304;partial=true;product=flagellar hook protein FlgE;protein_id=EIE28657.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000125.1 1 1225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000125.1 Genbank region 1 1225 . + . ID=AIHX01000125.1:1..1225;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000125.1 Genbank gene 1 1225 . - . ID=gene-HP17_03309;Name=flgE;end_range=1225,.;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=HP17_03309;partial=true;start_range=.,1 AIHX01000125.1 Genbank CDS 1 1225 . - 2 ID=cds-EIE28647.1;Parent=gene-HP17_03309;Dbxref=NCBI_GP:EIE28647.1;Name=EIE28647.1;end_range=1225,.;gbkey=CDS;gene=flgE;locus_tag=HP17_03309;partial=true;product=flagellar hook protein FlgE;protein_id=EIE28647.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000126.1 1 5179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000126.1 Genbank region 1 5179 . + . ID=AIHX01000126.1:1..5179;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000126.1 Genbank gene 1 377 . - . ID=gene-HP17_03314;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=HP17_03314;partial=true;start_range=.,1 AIHX01000126.1 Genbank CDS 1 377 . - 0 ID=cds-EIE28640.1;Parent=gene-HP17_03314;Dbxref=NCBI_GP:EIE28640.1;Name=EIE28640.1;Note=COG1749 Flagellar hook protein FlgE;gbkey=CDS;gene=flgE;locus_tag=HP17_03314;partial=true;product=flagellar hook protein FlgE;protein_id=EIE28640.1;start_range=.,1;transl_table=11 AIHX01000126.1 Genbank gene 588 1322 . - . ID=gene-HP17_03319;Name=HP17_03319;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03319 AIHX01000126.1 Genbank CDS 588 1322 . - 0 ID=cds-EIE28641.1;Parent=gene-HP17_03319;Dbxref=NCBI_GP:EIE28641.1;Name=EIE28641.1;Note=COG2134 CDP-diacylglycerol pyrophosphatase;gbkey=CDS;locus_tag=HP17_03319;product=CDP-diacylglycerol pyrophosphatase;protein_id=EIE28641.1;transl_table=11 AIHX01000126.1 Genbank gene 1674 2003 . + . ID=gene-HP17_03324;Name=HP17_03324;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03324 AIHX01000126.1 Genbank CDS 1674 2003 . + 0 ID=cds-EIE28642.1;Parent=gene-HP17_03324;Dbxref=NCBI_GP:EIE28642.1;Name=EIE28642.1;Note=COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism;gbkey=CDS;locus_tag=HP17_03324;product=alkylphosphonate uptake protein;protein_id=EIE28642.1;transl_table=11 AIHX01000126.1 Genbank gene 2061 2276 . - . ID=gene-HP17_03329;Name=HP17_03329;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03329 AIHX01000126.1 Genbank CDS 2061 2276 . - 0 ID=cds-EIE28643.1;Parent=gene-HP17_03329;Dbxref=NCBI_GP:EIE28643.1;Name=EIE28643.1;gbkey=CDS;locus_tag=HP17_03329;product=Hypothetical protein;protein_id=EIE28643.1;transl_table=11 AIHX01000126.1 Genbank gene 2359 3237 . - . ID=gene-HP17_03334;Name=HP17_03334;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03334 AIHX01000126.1 Genbank CDS 2359 3237 . - 0 ID=cds-EIE28644.1;Parent=gene-HP17_03334;Dbxref=NCBI_GP:EIE28644.1;Name=EIE28644.1;gbkey=CDS;locus_tag=HP17_03334;product=Hypothetical protein;protein_id=EIE28644.1;transl_table=11 AIHX01000126.1 Genbank gene 3382 4899 . - . ID=gene-HP17_03339;Name=HP17_03339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03339 AIHX01000126.1 Genbank CDS 3382 4899 . - 0 ID=cds-EIE28645.1;Parent=gene-HP17_03339;Dbxref=NCBI_GP:EIE28645.1;Name=EIE28645.1;Note=COG0753 Catalase;gbkey=CDS;locus_tag=HP17_03339;product=catalase;protein_id=EIE28645.1;transl_table=11 ##sequence-region AIHX01000127.1 1 1918 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000127.1 Genbank region 1 1918 . + . ID=AIHX01000127.1:1..1918;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000127.1 Genbank gene 1 1918 . + . ID=gene-HP17_03344;Name=HP17_03344;end_range=1918,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03344;partial=true;start_range=.,1 AIHX01000127.1 Genbank CDS 1 1918 . + 2 ID=cds-EIE28638.1;Parent=gene-HP17_03344;Dbxref=NCBI_GP:EIE28638.1;Name=EIE28638.1;Note=COG1629 Outer membrane receptor proteins%2C mostly Fe transport;end_range=1918,.;gbkey=CDS;locus_tag=HP17_03344;partial=true;product=iron-regulated outer membrane protein;protein_id=EIE28638.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000128.1 1 8680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000128.1 Genbank region 1 8680 . + . ID=AIHX01000128.1:1..8680;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000128.1 Genbank gene 1 460 . + . ID=gene-HP17_03349;Name=HP17_03349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03349;partial=true;start_range=.,1 AIHX01000128.1 Genbank CDS 1 460 . + 1 ID=cds-EIE28626.1;Parent=gene-HP17_03349;Dbxref=NCBI_GP:EIE28626.1;Name=EIE28626.1;Note=COG1629 Outer membrane receptor proteins%2C mostly Fe transport;gbkey=CDS;locus_tag=HP17_03349;partial=true;product=iron-regulated outer membrane protein;protein_id=EIE28626.1;start_range=.,1;transl_table=11 AIHX01000128.1 Genbank gene 461 934 . - . ID=gene-HP17_03354;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=HP17_03354 AIHX01000128.1 Genbank CDS 461 934 . - 0 ID=cds-EIE28627.1;Parent=gene-HP17_03354;Dbxref=NCBI_GP:EIE28627.1;Name=EIE28627.1;Note=COG0817 Holliday junction resolvasome%2C endonuclease subunit;gbkey=CDS;gene=ruvC;locus_tag=HP17_03354;product=Holliday junction resolvase;protein_id=EIE28627.1;transl_table=11 AIHX01000128.1 Genbank gene 1066 1791 . + . ID=gene-HP17_03359;Name=HP17_03359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03359 AIHX01000128.1 Genbank CDS 1066 1791 . + 0 ID=cds-EIE28628.1;Parent=gene-HP17_03359;Dbxref=NCBI_GP:EIE28628.1;Name=EIE28628.1;Note=COG1432 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_03359;product=Hypothetical protein;protein_id=EIE28628.1;transl_table=11 AIHX01000128.1 Genbank gene 1945 2133 . - . ID=gene-HP17_03364;Name=HP17_03364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03364 AIHX01000128.1 Genbank CDS 1945 2133 . - 0 ID=cds-EIE28629.1;Parent=gene-HP17_03364;Dbxref=NCBI_GP:EIE28629.1;Name=EIE28629.1;gbkey=CDS;locus_tag=HP17_03364;product=Hypothetical protein;protein_id=EIE28629.1;transl_table=11 AIHX01000128.1 Genbank gene 2278 2475 . - . ID=gene-HP17_03369;Name=HP17_03369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03369 AIHX01000128.1 Genbank CDS 2278 2475 . - 0 ID=cds-EIE28630.1;Parent=gene-HP17_03369;Dbxref=NCBI_GP:EIE28630.1;Name=EIE28630.1;gbkey=CDS;locus_tag=HP17_03369;product=Hypothetical protein;protein_id=EIE28630.1;transl_table=11 AIHX01000128.1 Genbank gene 2623 2772 . - . ID=gene-HP17_03374;Name=HP17_03374;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03374 AIHX01000128.1 Genbank CDS 2623 2772 . - 0 ID=cds-EIE28631.1;Parent=gene-HP17_03374;Dbxref=NCBI_GP:EIE28631.1;Name=EIE28631.1;gbkey=CDS;locus_tag=HP17_03374;product=Hypothetical protein;protein_id=EIE28631.1;transl_table=11 AIHX01000128.1 Genbank gene 2794 2925 . - . ID=gene-HP17_03379;Name=HP17_03379;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03379 AIHX01000128.1 Genbank CDS 2794 2925 . - 0 ID=cds-EIE28632.1;Parent=gene-HP17_03379;Dbxref=NCBI_GP:EIE28632.1;Name=EIE28632.1;gbkey=CDS;locus_tag=HP17_03379;product=Hypothetical protein;protein_id=EIE28632.1;transl_table=11 AIHX01000128.1 Genbank gene 2955 3506 . - . ID=gene-HP17_03384;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=HP17_03384 AIHX01000128.1 Genbank CDS 2955 3506 . - 0 ID=cds-EIE28633.1;Parent=gene-HP17_03384;Dbxref=NCBI_GP:EIE28633.1;Name=EIE28633.1;Note=COG0632 Holliday junction resolvasome%2C DNA-binding subunit;gbkey=CDS;gene=ruvA;locus_tag=HP17_03384;product=Holliday junction DNA helicase RuvA;protein_id=EIE28633.1;transl_table=11 AIHX01000128.1 Genbank gene 3532 5376 . - . ID=gene-HP17_03389;Name=HP17_03389;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03389 AIHX01000128.1 Genbank CDS 3532 5376 . - 0 ID=cds-EIE28634.1;Parent=gene-HP17_03389;Dbxref=NCBI_GP:EIE28634.1;Name=EIE28634.1;gbkey=CDS;locus_tag=HP17_03389;product=Hypothetical protein;protein_id=EIE28634.1;transl_table=11 AIHX01000128.1 Genbank gene 5469 6929 . + . ID=gene-HP17_03394;Name=HP17_03394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03394 AIHX01000128.1 Genbank CDS 5469 6929 . + 0 ID=cds-EIE28635.1;Parent=gene-HP17_03394;Dbxref=NCBI_GP:EIE28635.1;Name=EIE28635.1;Note=COG0728 Uncharacterized membrane protein%2C putative virulence factor;gbkey=CDS;locus_tag=HP17_03394;product=virulence factor mviN protein;protein_id=EIE28635.1;transl_table=11 AIHX01000128.1 Genbank gene 6930 8327 . + . ID=gene-HP17_03399;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=HP17_03399 AIHX01000128.1 Genbank CDS 6930 8327 . + 0 ID=cds-EIE28636.1;Parent=gene-HP17_03399;Dbxref=NCBI_GP:EIE28636.1;Name=EIE28636.1;Note=COG0215 Cysteinyl-tRNA synthetase;gbkey=CDS;gene=cysS;locus_tag=HP17_03399;product=cysteinyl-tRNA synthetase;protein_id=EIE28636.1;transl_table=11 ##sequence-region AIHX01000129.1 1 8591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000129.1 Genbank region 1 8591 . + . ID=AIHX01000129.1:1..8591;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000129.1 Genbank gene 1 3751 . + . ID=gene-HP17_03404;Name=HP17_03404;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03404;partial=true;start_range=.,1 AIHX01000129.1 Genbank CDS 1 3751 . + 1 ID=cds-EIE28616.1;Parent=gene-HP17_03404;Dbxref=NCBI_GP:EIE28616.1;Name=EIE28616.1;gbkey=CDS;locus_tag=HP17_03404;partial=true;product=vacuolating cytotoxin;protein_id=EIE28616.1;start_range=.,1;transl_table=11 AIHX01000129.1 Genbank gene 3812 4579 . - . ID=gene-HP17_03409;Name=HP17_03409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03409 AIHX01000129.1 Genbank CDS 3812 4579 . - 0 ID=cds-EIE28617.1;Parent=gene-HP17_03409;Dbxref=NCBI_GP:EIE28617.1;Name=EIE28617.1;Note=COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems%2C ATPase components;gbkey=CDS;locus_tag=HP17_03409;product=IRON(III) dicitrate transport system ATP-binding protein;protein_id=EIE28617.1;transl_table=11 AIHX01000129.1 Genbank gene 4579 5559 . - . ID=gene-HP17_03414;Name=HP17_03414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03414 AIHX01000129.1 Genbank CDS 4579 5559 . - 0 ID=cds-EIE28618.1;Parent=gene-HP17_03414;Dbxref=NCBI_GP:EIE28618.1;Name=EIE28618.1;Note=COG0609 ABC-type Fe3+-siderophore transport system%2C permease component;gbkey=CDS;locus_tag=HP17_03414;product=iron(III) dicitrate ABC transporter permease protein (fecD);protein_id=EIE28618.1;transl_table=11 AIHX01000129.1 Genbank gene 5552 6406 . - . ID=gene-HP17_03419;Name=HP17_03419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03419 AIHX01000129.1 Genbank CDS 5552 6406 . - 0 ID=cds-EIE28619.1;Parent=gene-HP17_03419;Dbxref=NCBI_GP:EIE28619.1;Name=EIE28619.1;Note=COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases);gbkey=CDS;locus_tag=HP17_03419;product=short-chain oxidoreductase;protein_id=EIE28619.1;transl_table=11 AIHX01000129.1 Genbank gene 6546 7070 . + . ID=gene-HP17_03424;Name=HP17_03424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03424 AIHX01000129.1 Genbank CDS 6546 7070 . + 0 ID=cds-EIE28620.1;Parent=gene-HP17_03424;Dbxref=NCBI_GP:EIE28620.1;Name=EIE28620.1;Note=COG1607 Acyl-CoA hydrolase;gbkey=CDS;locus_tag=HP17_03424;product=Hypothetical protein;protein_id=EIE28620.1;transl_table=11 AIHX01000129.1 Genbank gene 7176 7448 . - . ID=gene-HP17_03429;Name=HP17_03429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03429 AIHX01000129.1 Genbank CDS 7176 7448 . - 0 ID=cds-EIE28621.1;Parent=gene-HP17_03429;Dbxref=NCBI_GP:EIE28621.1;Name=EIE28621.1;Note=COG3041 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_03429;product=Hypothetical protein;protein_id=EIE28621.1;transl_table=11 AIHX01000129.1 Genbank gene 7435 7746 . - . ID=gene-HP17_03434;Name=HP17_03434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03434 AIHX01000129.1 Genbank CDS 7435 7746 . - 0 ID=cds-EIE28622.1;Parent=gene-HP17_03434;Dbxref=NCBI_GP:EIE28622.1;Name=EIE28622.1;gbkey=CDS;locus_tag=HP17_03434;product=Hypothetical protein;protein_id=EIE28622.1;transl_table=11 AIHX01000129.1 Genbank gene 7825 8085 . - . ID=gene-HP17_03439;Name=HP17_03439;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03439 AIHX01000129.1 Genbank CDS 7825 8085 . - 0 ID=cds-EIE28623.1;Parent=gene-HP17_03439;Dbxref=NCBI_GP:EIE28623.1;Name=EIE28623.1;Note=COG3041 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_03439;product=Hypothetical protein;protein_id=EIE28623.1;transl_table=11 AIHX01000129.1 Genbank gene 8066 8443 . - . ID=gene-HP17_03444;Name=HP17_03444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03444 AIHX01000129.1 Genbank CDS 8066 8443 . - 0 ID=cds-EIE28624.1;Parent=gene-HP17_03444;Dbxref=NCBI_GP:EIE28624.1;Name=EIE28624.1;gbkey=CDS;locus_tag=HP17_03444;product=Hypothetical protein;protein_id=EIE28624.1;transl_table=11 ##sequence-region AIHX01000130.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000130.1 Genbank region 1 229 . + . ID=AIHX01000130.1:1..229;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori ##sequence-region AIHX01000131.1 1 19937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000131.1 Genbank region 1 19937 . + . ID=AIHX01000131.1:1..19937;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000131.1 Genbank gene 1 123 . + . ID=gene-HP17_03449;Name=HP17_03449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03449;partial=true;start_range=.,1 AIHX01000131.1 Genbank CDS 1 123 . + 0 ID=cds-EIE28574.1;Parent=gene-HP17_03449;Dbxref=NCBI_GP:EIE28574.1;Name=EIE28574.1;gbkey=CDS;locus_tag=HP17_03449;partial=true;product=Hypothetical protein;protein_id=EIE28574.1;start_range=.,1;transl_table=11 AIHX01000131.1 Genbank gene 259 1029 . - . ID=gene-HP17_03454;Name=HP17_03454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03454 AIHX01000131.1 Genbank CDS 259 1029 . - 0 ID=cds-EIE28575.1;Parent=gene-HP17_03454;Dbxref=NCBI_GP:EIE28575.1;Name=EIE28575.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_03454;product=Cysteine-rich protein X;protein_id=EIE28575.1;transl_table=11 AIHX01000131.1 Genbank gene 1098 1298 . + . ID=gene-HP17_03459;Name=HP17_03459;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03459 AIHX01000131.1 Genbank CDS 1098 1298 . + 0 ID=cds-EIE28576.1;Parent=gene-HP17_03459;Dbxref=NCBI_GP:EIE28576.1;Name=EIE28576.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_03459;product=Hypothetical protein;protein_id=EIE28576.1;transl_table=11 AIHX01000131.1 Genbank gene 1295 2998 . - . ID=gene-HP17_03464;Name=HP17_03464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03464 AIHX01000131.1 Genbank CDS 1295 2998 . - 0 ID=cds-EIE28577.1;Parent=gene-HP17_03464;Dbxref=NCBI_GP:EIE28577.1;Name=EIE28577.1;Note=COG0405 Gamma-glutamyltransferase;gbkey=CDS;locus_tag=HP17_03464;product=gamma-glutamyltranspeptidase;protein_id=EIE28577.1;transl_table=11 AIHX01000131.1 Genbank gene 3214 5034 . - . ID=gene-HP17_03469;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=HP17_03469 AIHX01000131.1 Genbank CDS 3214 5034 . - 0 ID=cds-EIE28578.1;Parent=gene-HP17_03469;Dbxref=NCBI_GP:EIE28578.1;Name=EIE28578.1;Note=COG1256 Flagellar hook-associated protein;gbkey=CDS;gene=flgK;locus_tag=HP17_03469;product=flagellar hook-associated protein FlgK;protein_id=EIE28578.1;transl_table=11 AIHX01000131.1 Genbank gene 5036 5470 . - . ID=gene-HP17_03474;Name=HP17_03474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03474 AIHX01000131.1 Genbank CDS 5036 5470 . - 0 ID=cds-EIE28579.1;Parent=gene-HP17_03474;Dbxref=NCBI_GP:EIE28579.1;Name=EIE28579.1;gbkey=CDS;locus_tag=HP17_03474;product=Hypothetical protein;protein_id=EIE28579.1;transl_table=11 AIHX01000131.1 Genbank gene 5599 6540 . - . ID=gene-HP17_03479;Name=HP17_03479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03479 AIHX01000131.1 Genbank CDS 5599 6540 . - 0 ID=cds-EIE28580.1;Parent=gene-HP17_03479;Dbxref=NCBI_GP:EIE28580.1;Name=EIE28580.1;Note=COG0270 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_03479;product=M.HpyAVIII%2C a type II cytosine specific DNA methyltransferase;protein_id=EIE28580.1;transl_table=11 AIHX01000131.1 Genbank gene 6702 6905 . - . ID=gene-HP17_03484;Name=HP17_03484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03484 AIHX01000131.1 Genbank CDS 6702 6905 . - 0 ID=cds-EIE28581.1;Parent=gene-HP17_03484;Dbxref=NCBI_GP:EIE28581.1;Name=EIE28581.1;gbkey=CDS;locus_tag=HP17_03484;product=Hypothetical protein;protein_id=EIE28581.1;transl_table=11 AIHX01000131.1 Genbank gene 6969 7175 . - . ID=gene-HP17_03489;Name=HP17_03489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03489 AIHX01000131.1 Genbank CDS 6969 7175 . - 0 ID=cds-EIE28582.1;Parent=gene-HP17_03489;Dbxref=NCBI_GP:EIE28582.1;Name=EIE28582.1;gbkey=CDS;locus_tag=HP17_03489;product=Hypothetical protein;protein_id=EIE28582.1;transl_table=11 AIHX01000131.1 Genbank gene 7207 7764 . - . ID=gene-HP17_03494;Name=HP17_03494;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03494 AIHX01000131.1 Genbank CDS 7207 7764 . - 0 ID=cds-EIE28583.1;Parent=gene-HP17_03494;Dbxref=NCBI_GP:EIE28583.1;Name=EIE28583.1;Note=COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2;gbkey=CDS;locus_tag=HP17_03494;product=FKBP-type peptidyl-prolyl cis-trans isomerase slyD;protein_id=EIE28583.1;transl_table=11 AIHX01000131.1 Genbank gene 7751 8746 . - . ID=gene-HP17_03499;Name=HP17_03499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03499 AIHX01000131.1 Genbank CDS 7751 8746 . - 0 ID=cds-EIE28584.1;Parent=gene-HP17_03499;Dbxref=NCBI_GP:EIE28584.1;Name=EIE28584.1;gbkey=CDS;locus_tag=HP17_03499;product=Hypothetical protein;protein_id=EIE28584.1;transl_table=11 AIHX01000131.1 Genbank gene 8754 9293 . - . ID=gene-HP17_03504;Name=HP17_03504;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03504 AIHX01000131.1 Genbank CDS 8754 9293 . - 0 ID=cds-EIE28585.1;Parent=gene-HP17_03504;Dbxref=NCBI_GP:EIE28585.1;Name=EIE28585.1;Note=COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins;gbkey=CDS;locus_tag=HP17_03504;product=peptidoglycan-associated lipoprotein precursor;protein_id=EIE28585.1;transl_table=11 AIHX01000131.1 Genbank gene 9360 10613 . - . ID=gene-HP17_03509;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=HP17_03509 AIHX01000131.1 Genbank CDS 9360 10613 . - 0 ID=cds-EIE28586.1;Parent=gene-HP17_03509;Dbxref=NCBI_GP:EIE28586.1;Name=EIE28586.1;Note=COG0823 Periplasmic component of the Tol biopolymer transport system;gbkey=CDS;gene=tolB;locus_tag=HP17_03509;product=translocation protein TolB;protein_id=EIE28586.1;transl_table=11 AIHX01000131.1 Genbank gene 10610 11422 . - . ID=gene-HP17_03514;Name=HP17_03514;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03514 AIHX01000131.1 Genbank CDS 10610 11422 . - 0 ID=cds-EIE28587.1;Parent=gene-HP17_03514;Dbxref=NCBI_GP:EIE28587.1;Name=EIE28587.1;gbkey=CDS;locus_tag=HP17_03514;product=Hypothetical protein;protein_id=EIE28587.1;transl_table=11 AIHX01000131.1 Genbank gene 11441 11842 . - . ID=gene-HP17_03519;Name=HP17_03519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03519 AIHX01000131.1 Genbank CDS 11441 11842 . - 0 ID=cds-EIE28588.1;Parent=gene-HP17_03519;Dbxref=NCBI_GP:EIE28588.1;Name=EIE28588.1;Note=COG0848 Biopolymer transport protein;gbkey=CDS;locus_tag=HP17_03519;product=Biopolymer transport protein ExbD/TolR;protein_id=EIE28588.1;transl_table=11 AIHX01000131.1 Genbank gene 11895 12464 . - . ID=gene-HP17_03524;Name=HP17_03524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03524 AIHX01000131.1 Genbank CDS 11895 12464 . - 0 ID=cds-EIE28589.1;Parent=gene-HP17_03524;Dbxref=NCBI_GP:EIE28589.1;Name=EIE28589.1;Note=COG0811 Biopolymer transport proteins;gbkey=CDS;locus_tag=HP17_03524;product=biopolymer transport protein;protein_id=EIE28589.1;transl_table=11 AIHX01000131.1 Genbank gene 12475 12846 . - . ID=gene-HP17_03529;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=HP17_03529 AIHX01000131.1 Genbank CDS 12475 12846 . - 0 ID=cds-EIE28590.1;Parent=gene-HP17_03529;Dbxref=NCBI_GP:EIE28590.1;Name=EIE28590.1;Note=COG0355 F0F1-type ATP synthase%2C epsilon subunit (mitochondrial delta subunit);gbkey=CDS;gene=atpC;locus_tag=HP17_03529;product=F0F1 ATP synthase subunit epsilon;protein_id=EIE28590.1;transl_table=11 AIHX01000131.1 Genbank gene 12857 14257 . - . ID=gene-HP17_03534;Name=HP17_03534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03534 AIHX01000131.1 Genbank CDS 12857 14257 . - 0 ID=cds-EIE28591.1;Parent=gene-HP17_03534;Dbxref=NCBI_GP:EIE28591.1;Name=EIE28591.1;Note=COG0055 F0F1-type ATP synthase%2C beta subunit;gbkey=CDS;locus_tag=HP17_03534;product=F0F1 ATP synthase subunit beta;protein_id=EIE28591.1;transl_table=11 AIHX01000131.1 Genbank gene 14286 15191 . - . ID=gene-HP17_03539;Name=HP17_03539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03539 AIHX01000131.1 Genbank CDS 14286 15191 . - 0 ID=cds-EIE28592.1;Parent=gene-HP17_03539;Dbxref=NCBI_GP:EIE28592.1;Name=EIE28592.1;Note=COG0224 F0F1-type ATP synthase%2C gamma subunit;gbkey=CDS;locus_tag=HP17_03539;product=F0F1 ATP synthase subunit gamma;protein_id=EIE28592.1;transl_table=11 AIHX01000131.1 Genbank gene 15206 16717 . - . ID=gene-HP17_03544;Name=HP17_03544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03544 AIHX01000131.1 Genbank CDS 15206 16717 . - 0 ID=cds-EIE28593.1;Parent=gene-HP17_03544;Dbxref=NCBI_GP:EIE28593.1;Name=EIE28593.1;Note=COG0056 F0F1-type ATP synthase%2C alpha subunit;gbkey=CDS;locus_tag=HP17_03544;product=F0F1 ATP synthase subunit alpha;protein_id=EIE28593.1;transl_table=11 AIHX01000131.1 Genbank gene 16740 17282 . - . ID=gene-HP17_03549;Name=HP17_03549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03549 AIHX01000131.1 Genbank CDS 16740 17282 . - 0 ID=cds-EIE28594.1;Parent=gene-HP17_03549;Dbxref=NCBI_GP:EIE28594.1;Name=EIE28594.1;gbkey=CDS;locus_tag=HP17_03549;product=F0F1 ATP synthase subunit delta;protein_id=EIE28594.1;transl_table=11 AIHX01000131.1 Genbank gene 17283 17798 . - . ID=gene-HP17_03554;Name=HP17_03554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03554 AIHX01000131.1 Genbank CDS 17283 17798 . - 0 ID=cds-EIE28595.1;Parent=gene-HP17_03554;Dbxref=NCBI_GP:EIE28595.1;Name=EIE28595.1;gbkey=CDS;locus_tag=HP17_03554;product=F0F1 ATP synthase subunit B;protein_id=EIE28595.1;transl_table=11 AIHX01000131.1 Genbank gene 17802 18236 . - . ID=gene-HP17_03559;Name=HP17_03559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03559 AIHX01000131.1 Genbank CDS 17802 18236 . - 0 ID=cds-EIE28596.1;Parent=gene-HP17_03559;Dbxref=NCBI_GP:EIE28596.1;Name=EIE28596.1;gbkey=CDS;locus_tag=HP17_03559;product=F0F1 ATP synthase subunit B';protein_id=EIE28596.1;transl_table=11 AIHX01000131.1 Genbank gene 18347 19219 . - . ID=gene-HP17_03564;Name=HP17_03564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03564 AIHX01000131.1 Genbank CDS 18347 19219 . - 0 ID=cds-EIE28597.1;Parent=gene-HP17_03564;Dbxref=NCBI_GP:EIE28597.1;Name=EIE28597.1;Note=COG1475 Predicted transcriptional regulators;gbkey=CDS;locus_tag=HP17_03564;product=plasmid replication-partition-like protein;protein_id=EIE28597.1;transl_table=11 AIHX01000131.1 Genbank gene 19223 19937 . - . ID=gene-HP17_03569;Name=HP17_03569;end_range=19937,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03569;partial=true AIHX01000131.1 Genbank CDS 19223 19937 . - 1 ID=cds-EIE28598.1;Parent=gene-HP17_03569;Dbxref=NCBI_GP:EIE28598.1;Name=EIE28598.1;Note=COG1192 ATPases involved in chromosome partitioning;end_range=19937,.;gbkey=CDS;locus_tag=HP17_03569;partial=true;product=spoOJ regulator;protein_id=EIE28598.1;transl_table=11 ##sequence-region AIHX01000132.1 1 2824 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000132.1 Genbank region 1 2824 . + . ID=AIHX01000132.1:1..2824;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000132.1 Genbank gene 1 58 . - . ID=gene-HP17_03574;Name=HP17_03574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03574;partial=true;start_range=.,1 AIHX01000132.1 Genbank CDS 1 58 . - 0 ID=cds-EIE28563.1;Parent=gene-HP17_03574;Dbxref=NCBI_GP:EIE28563.1;Name=EIE28563.1;gbkey=CDS;locus_tag=HP17_03574;partial=true;product=Hypothetical protein;protein_id=EIE28563.1;start_range=.,1;transl_table=11 AIHX01000132.1 Genbank gene 61 699 . - . ID=gene-HP17_03579;Name=HP17_03579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03579 AIHX01000132.1 Genbank CDS 61 699 . - 0 ID=cds-EIE28564.1;Parent=gene-HP17_03579;Dbxref=NCBI_GP:EIE28564.1;Name=EIE28564.1;Note=COG0340 Biotin-(acetyl-CoA carboxylase) ligase;gbkey=CDS;locus_tag=HP17_03579;product=biotin--protein ligase;protein_id=EIE28564.1;transl_table=11 AIHX01000132.1 Genbank gene 696 1607 . - . ID=gene-HP17_03584;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=HP17_03584 AIHX01000132.1 Genbank CDS 696 1607 . - 0 ID=cds-EIE28565.1;Parent=gene-HP17_03584;Dbxref=NCBI_GP:EIE28565.1;Name=EIE28565.1;Note=COG0223 Methionyl-tRNA formyltransferase;gbkey=CDS;gene=fmt;locus_tag=HP17_03584;product=methionyl-tRNA formyltransferase;protein_id=EIE28565.1;transl_table=11 AIHX01000132.1 Genbank gene 1609 2808 . - . ID=gene-HP17_03589;Name=HP17_03589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03589 AIHX01000132.1 Genbank CDS 1609 2808 . - 0 ID=cds-EIE28566.1;Parent=gene-HP17_03589;Dbxref=NCBI_GP:EIE28566.1;Name=EIE28566.1;Note=COG4694 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_03589;product=Hypothetical protein;protein_id=EIE28566.1;transl_table=11 ##sequence-region AIHX01000133.1 1 4700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000133.1 Genbank region 1 4700 . + . ID=AIHX01000133.1:1..4700;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000133.1 Genbank gene 1 136 . + . ID=gene-HP17_00310;Name=HP17_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00310;partial=true;start_range=.,1 AIHX01000133.1 Genbank CDS 1 136 . + 1 ID=cds-EIE28548.1;Parent=gene-HP17_00310;Dbxref=NCBI_GP:EIE28548.1;Name=EIE28548.1;gbkey=CDS;locus_tag=HP17_00310;partial=true;product=Hypothetical protein;protein_id=EIE28548.1;start_range=.,1;transl_table=11 AIHX01000133.1 Genbank gene 206 2182 . + . ID=gene-HP17_00315;Name=HP17_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00315 AIHX01000133.1 Genbank CDS 206 2182 . + 0 ID=cds-EIE28549.1;Parent=gene-HP17_00315;Dbxref=NCBI_GP:EIE28549.1;Name=EIE28549.1;Note=COG0556 Helicase subunit of the DNA excision repair complex;gbkey=CDS;locus_tag=HP17_00315;product=excinuclease ABC subunit B;protein_id=EIE28549.1;transl_table=11 AIHX01000133.1 Genbank gene 2193 3026 . - . ID=gene-HP17_00320;Name=HP17_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00320 AIHX01000133.1 Genbank CDS 2193 3026 . - 0 ID=cds-EIE28550.1;Parent=gene-HP17_00320;Dbxref=NCBI_GP:EIE28550.1;Name=EIE28550.1;gbkey=CDS;locus_tag=HP17_00320;product=outer membrane protein;protein_id=EIE28550.1;transl_table=11 AIHX01000133.1 Genbank gene 3091 4413 . - . ID=gene-HP17_00325;Name=HP17_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00325 AIHX01000133.1 Genbank CDS 3091 4413 . - 0 ID=cds-EIE28551.1;Parent=gene-HP17_00325;Dbxref=NCBI_GP:EIE28551.1;Name=EIE28551.1;Note=COG0015 Adenylosuccinate lyase;gbkey=CDS;locus_tag=HP17_00325;product=adenylosuccinate lyase;protein_id=EIE28551.1;transl_table=11 AIHX01000133.1 Genbank gene 4523 4700 . - . ID=gene-HP17_00330;Name=HP17_00330;end_range=4700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00330;partial=true AIHX01000133.1 Genbank CDS 4523 4700 . - 1 ID=cds-EIE28552.1;Parent=gene-HP17_00330;Dbxref=NCBI_GP:EIE28552.1;Name=EIE28552.1;Note=COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C beta subunit;end_range=4700,.;gbkey=CDS;locus_tag=HP17_00330;partial=true;product=pyruvate ferredoxin oxidoreductase%2C beta subunit;protein_id=EIE28552.1;transl_table=11 ##sequence-region AIHX01000134.1 1 7453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000134.1 Genbank region 1 7453 . + . ID=AIHX01000134.1:1..7453;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000134.1 Genbank gene 1 93 . + . ID=gene-HP17_03594;Name=HP17_03594;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03594;partial=true;start_range=.,1 AIHX01000134.1 Genbank CDS 1 93 . + 0 ID=cds-EIE28526.1;Parent=gene-HP17_03594;Dbxref=NCBI_GP:EIE28526.1;Name=EIE28526.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_03594;partial=true;product=Hypothetical protein;protein_id=EIE28526.1;start_range=.,1;transl_table=11 AIHX01000134.1 Genbank gene 120 1430 . + . ID=gene-HP17_03599;Name=HP17_03599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03599 AIHX01000134.1 Genbank CDS 120 1430 . + 0 ID=cds-EIE28527.1;Parent=gene-HP17_03599;Dbxref=NCBI_GP:EIE28527.1;Name=EIE28527.1;gbkey=CDS;locus_tag=HP17_03599;product=Hypothetical protein;protein_id=EIE28527.1;transl_table=11 AIHX01000134.1 Genbank gene 1491 3662 . + . ID=gene-HP17_03604;Name=HP17_03604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03604 AIHX01000134.1 Genbank CDS 1491 3662 . + 0 ID=cds-EIE28528.1;Parent=gene-HP17_03604;Dbxref=NCBI_GP:EIE28528.1;Name=EIE28528.1;gbkey=CDS;locus_tag=HP17_03604;product=periplasmic competence protein-like protein;protein_id=EIE28528.1;transl_table=11 AIHX01000134.1 Genbank gene 3666 5051 . + . ID=gene-HP17_03609;Name=HP17_03609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03609 AIHX01000134.1 Genbank CDS 3666 5051 . + 0 ID=cds-EIE28529.1;Parent=gene-HP17_03609;Dbxref=NCBI_GP:EIE28529.1;Name=EIE28529.1;gbkey=CDS;locus_tag=HP17_03609;product=Hypothetical protein;protein_id=EIE28529.1;transl_table=11 AIHX01000134.1 Genbank gene 5051 6253 . + . ID=gene-HP17_03614;Name=HP17_03614;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03614 AIHX01000134.1 Genbank CDS 5051 6253 . + 0 ID=cds-EIE28530.1;Parent=gene-HP17_03614;Dbxref=NCBI_GP:EIE28530.1;Name=EIE28530.1;gbkey=CDS;locus_tag=HP17_03614;product=Hypothetical protein;protein_id=EIE28530.1;transl_table=11 AIHX01000134.1 Genbank gene 6317 7393 . - . ID=gene-HP17_03619;Name=HP17_03619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03619 AIHX01000134.1 Genbank CDS 6317 7393 . - 0 ID=cds-EIE28531.1;Parent=gene-HP17_03619;Dbxref=NCBI_GP:EIE28531.1;Name=EIE28531.1;Note=COG0582 Integrase;gbkey=CDS;locus_tag=HP17_03619;product=integrase-recombinase protein;protein_id=EIE28531.1;transl_table=11 ##sequence-region AIHX01000135.1 1 26174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000135.1 Genbank region 1 26174 . + . ID=AIHX01000135.1:1..26174;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000135.1 Genbank gene 30 818 . - . ID=gene-HP17_03624;Name=HP17_03624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03624 AIHX01000135.1 Genbank CDS 30 818 . - 0 ID=cds-EIE28492.1;Parent=gene-HP17_03624;Dbxref=NCBI_GP:EIE28492.1;Name=EIE28492.1;gbkey=CDS;locus_tag=HP17_03624;product=Hypothetical protein;protein_id=EIE28492.1;transl_table=11 AIHX01000135.1 Genbank gene 942 1430 . + . ID=gene-HP17_03629;Name=HP17_03629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03629 AIHX01000135.1 Genbank CDS 942 1430 . + 0 ID=cds-EIE28493.1;Parent=gene-HP17_03629;Dbxref=NCBI_GP:EIE28493.1;Name=EIE28493.1;Note=COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family;gbkey=CDS;locus_tag=HP17_03629;product=peptidyl-prolyl cis-trans isomerase B%2C cyclosporin-type rotamase (ppi);protein_id=EIE28493.1;transl_table=11 AIHX01000135.1 Genbank gene 1449 1679 . + . ID=gene-HP17_03634;Name=HP17_03634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03634 AIHX01000135.1 Genbank CDS 1449 1679 . + 0 ID=cds-EIE28494.1;Parent=gene-HP17_03634;Dbxref=NCBI_GP:EIE28494.1;Name=EIE28494.1;Note=COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing);gbkey=CDS;locus_tag=HP17_03634;product=carbon storage regulator;protein_id=EIE28494.1;transl_table=11 AIHX01000135.1 Genbank gene 1676 2482 . + . ID=gene-HP17_03639;Name=HP17_03639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03639 AIHX01000135.1 Genbank CDS 1676 2482 . + 0 ID=cds-EIE28495.1;Parent=gene-HP17_03639;Dbxref=NCBI_GP:EIE28495.1;Name=EIE28495.1;Note=COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase;gbkey=CDS;locus_tag=HP17_03639;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=EIE28495.1;transl_table=11 AIHX01000135.1 Genbank gene 2479 2937 . + . ID=gene-HP17_03644;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=HP17_03644 AIHX01000135.1 Genbank CDS 2479 2937 . + 0 ID=cds-EIE28496.1;Parent=gene-HP17_03644;Dbxref=NCBI_GP:EIE28496.1;Name=EIE28496.1;Note=COG0691 tmRNA-binding protein;gbkey=CDS;gene=smpB;locus_tag=HP17_03644;product=SsrA-binding protein;protein_id=EIE28496.1;transl_table=11 AIHX01000135.1 Genbank gene 2943 3395 . + . ID=gene-HP17_03649;Name=HP17_03649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03649 AIHX01000135.1 Genbank CDS 2943 3395 . + 0 ID=cds-EIE28497.1;Parent=gene-HP17_03649;Dbxref=NCBI_GP:EIE28497.1;Name=EIE28497.1;Note=COG0811 Biopolymer transport proteins;gbkey=CDS;locus_tag=HP17_03649;product=biopolymer transport protein;protein_id=EIE28497.1;transl_table=11 AIHX01000135.1 Genbank gene 3406 3807 . + . ID=gene-HP17_03654;Name=HP17_03654;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03654 AIHX01000135.1 Genbank CDS 3406 3807 . + 0 ID=cds-EIE28498.1;Parent=gene-HP17_03654;Dbxref=NCBI_GP:EIE28498.1;Name=EIE28498.1;Note=COG0848 Biopolymer transport protein;gbkey=CDS;locus_tag=HP17_03654;product=biopolymer transport protein;protein_id=EIE28498.1;transl_table=11 AIHX01000135.1 Genbank gene 3879 4013 . + . ID=gene-HP17_03659;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=HP17_03659 AIHX01000135.1 Genbank CDS 3879 4013 . + 0 ID=cds-EIE28499.1;Parent=gene-HP17_03659;Dbxref=NCBI_GP:EIE28499.1;Name=EIE28499.1;Note=COG0230 Ribosomal protein L34;gbkey=CDS;gene=rpmH;locus_tag=HP17_03659;product=50S ribosomal protein L34;protein_id=EIE28499.1;transl_table=11 AIHX01000135.1 Genbank gene 3973 4458 . + . ID=gene-HP17_03664;Name=HP17_03664;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03664 AIHX01000135.1 Genbank CDS 3973 4458 . + 0 ID=cds-EIE28500.1;Parent=gene-HP17_03664;Dbxref=NCBI_GP:EIE28500.1;Name=EIE28500.1;Note=COG0594 RNase P protein component;gbkey=CDS;locus_tag=HP17_03664;product=ribonuclease P protein component;protein_id=EIE28500.1;transl_table=11 AIHX01000135.1 Genbank gene 4445 4798 . + . ID=gene-HP17_03669;Name=HP17_03669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03669 AIHX01000135.1 Genbank CDS 4445 4798 . + 0 ID=cds-EIE28501.1;Parent=gene-HP17_03669;Dbxref=NCBI_GP:EIE28501.1;Name=EIE28501.1;Note=COG0759 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_03669;product=Hypothetical protein;protein_id=EIE28501.1;transl_table=11 AIHX01000135.1 Genbank gene 4804 6450 . + . ID=gene-HP17_03674;Name=HP17_03674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03674 AIHX01000135.1 Genbank CDS 4804 6450 . + 0 ID=cds-EIE28502.1;Parent=gene-HP17_03674;Dbxref=NCBI_GP:EIE28502.1;Name=EIE28502.1;Note=COG0706 Preprotein translocase subunit YidC;gbkey=CDS;locus_tag=HP17_03674;product=membrane protein insertase;protein_id=EIE28502.1;transl_table=11 AIHX01000135.1 Genbank gene 6450 7244 . + . ID=gene-HP17_03679;Name=HP17_03679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03679 AIHX01000135.1 Genbank CDS 6450 7244 . + 0 ID=cds-EIE28503.1;Parent=gene-HP17_03679;Dbxref=NCBI_GP:EIE28503.1;Name=EIE28503.1;Note=COG1315 Predicted polymerase%2C most proteins contain PALM domain%2C HD hydrolase domain and Zn-ribbon domain;gbkey=CDS;locus_tag=HP17_03679;product=Hypothetical protein;protein_id=EIE28503.1;transl_table=11 AIHX01000135.1 Genbank gene 7237 8589 . + . ID=gene-HP17_03684;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=HP17_03684 AIHX01000135.1 Genbank CDS 7237 8589 . + 0 ID=cds-EIE28504.1;Parent=gene-HP17_03684;Dbxref=NCBI_GP:EIE28504.1;Name=EIE28504.1;Note=COG0486 Predicted GTPase;gbkey=CDS;gene=trmE;locus_tag=HP17_03684;product=tRNA modification GTPase TrmE;protein_id=EIE28504.1;transl_table=11 AIHX01000135.1 Genbank gene 8793 11039 . + . ID=gene-HP17_03689;Name=HP17_03689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03689 AIHX01000135.1 Genbank CDS 8793 11039 . + 0 ID=cds-EIE28505.1;Parent=gene-HP17_03689;Dbxref=NCBI_GP:EIE28505.1;Name=EIE28505.1;gbkey=CDS;locus_tag=HP17_03689;product=outer membrane protein HomD;protein_id=EIE28505.1;transl_table=11 AIHX01000135.1 Genbank gene 11036 11242 . - . ID=gene-HP17_03694;Name=HP17_03694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03694 AIHX01000135.1 Genbank CDS 11036 11242 . - 0 ID=cds-EIE28506.1;Parent=gene-HP17_03694;Dbxref=NCBI_GP:EIE28506.1;Name=EIE28506.1;gbkey=CDS;locus_tag=HP17_03694;product=Hypothetical protein;protein_id=EIE28506.1;transl_table=11 AIHX01000135.1 Genbank gene 11552 11668 . + . ID=gene-HP17_03699;Name=HP17_03699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03699 AIHX01000135.1 Genbank CDS 11552 11668 . + 0 ID=cds-EIE28507.1;Parent=gene-HP17_03699;Dbxref=NCBI_GP:EIE28507.1;Name=EIE28507.1;Note=not present in 26695;gbkey=CDS;locus_tag=HP17_03699;product=Hypothetical protein;protein_id=EIE28507.1;transl_table=11 AIHX01000135.1 Genbank gene 11711 11812 . + . ID=gene-HP17_03704;Name=HP17_03704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03704 AIHX01000135.1 Genbank CDS 11711 11812 . + 0 ID=cds-EIE28508.1;Parent=gene-HP17_03704;Dbxref=NCBI_GP:EIE28508.1;Name=EIE28508.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_03704;product=Hypothetical protein;protein_id=EIE28508.1;transl_table=11 AIHX01000135.1 Genbank gene 11852 12763 . - . ID=gene-HP17_03709;Name=HP17_03709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03709 AIHX01000135.1 Genbank CDS 11852 12763 . - 0 ID=cds-EIE28509.1;Parent=gene-HP17_03709;Dbxref=NCBI_GP:EIE28509.1;Name=EIE28509.1;gbkey=CDS;locus_tag=HP17_03709;product=Hypothetical protein;protein_id=EIE28509.1;transl_table=11 AIHX01000135.1 Genbank gene 12773 13114 . - . ID=gene-HP17_03714;Name=HP17_03714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03714 AIHX01000135.1 Genbank CDS 12773 13114 . - 0 ID=cds-EIE28510.1;Parent=gene-HP17_03714;Dbxref=NCBI_GP:EIE28510.1;Name=EIE28510.1;Note=COG0481 Membrane GTPase LepA;gbkey=CDS;locus_tag=HP17_03714;product=Hypothetical protein;protein_id=EIE28510.1;transl_table=11 AIHX01000135.1 Genbank gene 13122 13649 . - . ID=gene-HP17_03719;Name=HP17_03719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03719 AIHX01000135.1 Genbank CDS 13122 13649 . - 0 ID=cds-EIE28511.1;Parent=gene-HP17_03719;Dbxref=NCBI_GP:EIE28511.1;Name=EIE28511.1;gbkey=CDS;locus_tag=HP17_03719;product=membrane-associated lipoprotein;protein_id=EIE28511.1;transl_table=11 AIHX01000135.1 Genbank gene 13673 14305 . - . ID=gene-HP17_03724;Name=HP17_03724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03724 AIHX01000135.1 Genbank CDS 13673 14305 . - 0 ID=cds-EIE28512.1;Parent=gene-HP17_03724;Dbxref=NCBI_GP:EIE28512.1;Name=EIE28512.1;gbkey=CDS;locus_tag=HP17_03724;product=collagen-binding surface adhesin SpaP;protein_id=EIE28512.1;transl_table=11 AIHX01000135.1 Genbank gene 14720 15034 . - . ID=gene-HP17_03729;Name=HP17_03729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03729 AIHX01000135.1 Genbank CDS 14720 15034 . - 0 ID=cds-EIE28513.1;Parent=gene-HP17_03729;Dbxref=NCBI_GP:EIE28513.1;Name=EIE28513.1;Note=COG0526 Thiol-disulfide isomerase and thioredoxins;gbkey=CDS;locus_tag=HP17_03729;product=thioredoxin;protein_id=EIE28513.1;transl_table=11 AIHX01000135.1 Genbank gene 15090 15863 . - . ID=gene-HP17_03734;Name=HP17_03734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03734 AIHX01000135.1 Genbank CDS 15090 15863 . - 0 ID=cds-EIE28514.1;Parent=gene-HP17_03734;Dbxref=NCBI_GP:EIE28514.1;Name=EIE28514.1;Note=COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases;gbkey=CDS;locus_tag=HP17_03734;product=ribosomal large subunit pseudouridine synthase B;protein_id=EIE28514.1;transl_table=11 AIHX01000135.1 Genbank gene 15860 19495 . - . ID=gene-HP17_03739;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=HP17_03739 AIHX01000135.1 Genbank CDS 15860 19495 . - 0 ID=cds-EIE28515.1;Parent=gene-HP17_03739;Dbxref=NCBI_GP:EIE28515.1;Name=EIE28515.1;Note=COG0587 DNA polymerase III%2C alpha subunit;gbkey=CDS;gene=dnaE;locus_tag=HP17_03739;product=DNA polymerase III subunit alpha;protein_id=EIE28515.1;transl_table=11 AIHX01000135.1 Genbank gene 19643 20695 . + . ID=gene-HP17_03744;Name=HP17_03744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03744 AIHX01000135.1 Genbank CDS 19643 20695 . + 0 ID=cds-EIE28516.1;Parent=gene-HP17_03744;Dbxref=NCBI_GP:EIE28516.1;Name=EIE28516.1;Note=COG1858 Cytochrome c peroxidase;gbkey=CDS;locus_tag=HP17_03744;product=cytochrome c551 peroxidase;protein_id=EIE28516.1;transl_table=11 AIHX01000135.1 Genbank gene 20692 20799 . + . ID=gene-HP17_03749;Name=HP17_03749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03749 AIHX01000135.1 Genbank CDS 20692 20799 . + 0 ID=cds-EIE28517.1;Parent=gene-HP17_03749;Dbxref=NCBI_GP:EIE28517.1;Name=EIE28517.1;Note=not present in 26695~not present in P79;gbkey=CDS;locus_tag=HP17_03749;product=Hypothetical protein;protein_id=EIE28517.1;transl_table=11 AIHX01000135.1 Genbank gene 20878 21465 . - . ID=gene-HP17_03754;Name=HP17_03754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03754 AIHX01000135.1 Genbank CDS 20878 21465 . - 0 ID=cds-EIE28518.1;Parent=gene-HP17_03754;Dbxref=NCBI_GP:EIE28518.1;Name=EIE28518.1;Note=COG3187 Heat shock protein;gbkey=CDS;locus_tag=HP17_03754;product=putative secreted motility protein;protein_id=EIE28518.1;transl_table=11 AIHX01000135.1 Genbank gene 21477 22154 . - . ID=gene-HP17_03759;Name=HP17_03759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03759 AIHX01000135.1 Genbank CDS 21477 22154 . - 0 ID=cds-EIE28519.1;Parent=gene-HP17_03759;Dbxref=NCBI_GP:EIE28519.1;Name=EIE28519.1;gbkey=CDS;locus_tag=HP17_03759;product=Hypothetical protein;protein_id=EIE28519.1;transl_table=11 AIHX01000135.1 Genbank gene 22157 22972 . - . ID=gene-HP17_03764;Name=HP17_03764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03764 AIHX01000135.1 Genbank CDS 22157 22972 . - 0 ID=cds-EIE28520.1;Parent=gene-HP17_03764;Dbxref=NCBI_GP:EIE28520.1;Name=EIE28520.1;Note=COG1463 ABC-type transport system involved in resistance to organic solvents%2C periplasmic component;gbkey=CDS;locus_tag=HP17_03764;product=ABC transport system substrate binding protein;protein_id=EIE28520.1;transl_table=11 AIHX01000135.1 Genbank gene 22957 23742 . - . ID=gene-HP17_03769;Name=HP17_03769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03769 AIHX01000135.1 Genbank CDS 22957 23742 . - 0 ID=cds-EIE28521.1;Parent=gene-HP17_03769;Dbxref=NCBI_GP:EIE28521.1;Name=EIE28521.1;Note=COG1127 ABC-type transport system involved in resistance to organic solvents%2C ATPase component;gbkey=CDS;locus_tag=HP17_03769;product=ABC transporter ATP-binding protein;protein_id=EIE28521.1;transl_table=11 AIHX01000135.1 Genbank gene 23742 24875 . - . ID=gene-HP17_03774;Name=HP17_03774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03774 AIHX01000135.1 Genbank CDS 23742 24875 . - 0 ID=cds-EIE28522.1;Parent=gene-HP17_03774;Dbxref=NCBI_GP:EIE28522.1;Name=EIE28522.1;Note=COG0767 ABC-type transport system involved in resistance to organic solvents%2C permease component;gbkey=CDS;locus_tag=HP17_03774;product=ABC transporter permease protein;protein_id=EIE28522.1;transl_table=11 AIHX01000135.1 Genbank gene 24897 25025 . - . ID=gene-HP17_03779;Name=HP17_03779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03779 AIHX01000135.1 Genbank CDS 24897 25025 . - 0 ID=cds-EIE28523.1;Parent=gene-HP17_03779;Dbxref=NCBI_GP:EIE28523.1;Name=EIE28523.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_03779;product=Hypothetical protein;protein_id=EIE28523.1;transl_table=11 AIHX01000135.1 Genbank gene 25009 25704 . + . ID=gene-HP17_03784;Name=HP17_03784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03784 AIHX01000135.1 Genbank CDS 25009 25704 . + 0 ID=cds-EIE28524.1;Parent=gene-HP17_03784;Dbxref=NCBI_GP:EIE28524.1;Name=EIE28524.1;gbkey=CDS;locus_tag=HP17_03784;product=outer membrane protein;protein_id=EIE28524.1;transl_table=11 AIHX01000135.1 Genbank gene 25709 26174 . - . ID=gene-HP17_03789;Name=HP17_03789;end_range=26174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03789;partial=true AIHX01000135.1 Genbank CDS 25709 26174 . - 1 ID=cds-EIE28525.1;Parent=gene-HP17_03789;Dbxref=NCBI_GP:EIE28525.1;Name=EIE28525.1;Note=COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase;end_range=26174,.;gbkey=CDS;locus_tag=HP17_03789;partial=true;product=branched-chain amino acid aminotransferase;protein_id=EIE28525.1;transl_table=11 ##sequence-region AIHX01000136.1 1 26596 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000136.1 Genbank region 1 26596 . + . ID=AIHX01000136.1:1..26596;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000136.1 Genbank gene 1 477 . - . ID=gene-HP17_03794;Name=HP17_03794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03794;partial=true;start_range=.,1 AIHX01000136.1 Genbank CDS 1 477 . - 0 ID=cds-EIE28427.1;Parent=gene-HP17_03794;Dbxref=NCBI_GP:EIE28427.1;Name=EIE28427.1;Note=COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase;gbkey=CDS;locus_tag=HP17_03794;partial=true;product=branched-chain amino acid aminotransferase;protein_id=EIE28427.1;start_range=.,1;transl_table=11 AIHX01000136.1 Genbank gene 528 1274 . - . ID=gene-HP17_03799;Name=HP17_03799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03799 AIHX01000136.1 Genbank CDS 528 1274 . - 0 ID=cds-EIE28428.1;Parent=gene-HP17_03799;Dbxref=NCBI_GP:EIE28428.1;Name=EIE28428.1;gbkey=CDS;locus_tag=HP17_03799;product=outer membrane protein HorJ;protein_id=EIE28428.1;transl_table=11 AIHX01000136.1 Genbank gene 1389 4058 . - . ID=gene-HP17_03804;Name=HP17_03804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03804 AIHX01000136.1 Genbank CDS 1389 4058 . - 0 ID=cds-EIE28429.1;Parent=gene-HP17_03804;Dbxref=NCBI_GP:EIE28429.1;Name=EIE28429.1;Note=COG0258 5'-3' exonuclease (including N-terminal domain of PolI);gbkey=CDS;locus_tag=HP17_03804;product=DNA polymerase I;protein_id=EIE28429.1;transl_table=11 AIHX01000136.1 Genbank gene 4129 5391 . - . ID=gene-HP17_03809;Name=HP17_03809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03809 AIHX01000136.1 Genbank CDS 4129 5391 . - 0 ID=cds-EIE28430.1;Parent=gene-HP17_03809;Dbxref=NCBI_GP:EIE28430.1;Name=EIE28430.1;gbkey=CDS;locus_tag=HP17_03809;product=type IIS R-M system restriction enzyme;protein_id=EIE28430.1;transl_table=11 AIHX01000136.1 Genbank gene 5388 7448 . - . ID=gene-HP17_03814;Name=HP17_03814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03814 AIHX01000136.1 Genbank CDS 5388 7448 . - 0 ID=cds-EIE28431.1;Parent=gene-HP17_03814;Dbxref=NCBI_GP:EIE28431.1;Name=EIE28431.1;Note=COG0286 Type I restriction-modification system methyltransferase subunit;gbkey=CDS;locus_tag=HP17_03814;product=type IIS restriction enzyme M protein (mod);protein_id=EIE28431.1;transl_table=11 AIHX01000136.1 Genbank gene 7458 8033 . - . ID=gene-HP17_03819;Name=HP17_03819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03819 AIHX01000136.1 Genbank CDS 7458 8033 . - 0 ID=cds-EIE28432.1;Parent=gene-HP17_03819;Dbxref=NCBI_GP:EIE28432.1;Name=EIE28432.1;gbkey=CDS;locus_tag=HP17_03819;product=Hypothetical protein;protein_id=EIE28432.1;transl_table=11 AIHX01000136.1 Genbank gene 8021 8596 . - . ID=gene-HP17_03824;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=HP17_03824 AIHX01000136.1 Genbank CDS 8021 8596 . - 0 ID=cds-EIE28433.1;Parent=gene-HP17_03824;Dbxref=NCBI_GP:EIE28433.1;Name=EIE28433.1;Note=COG0125 Thymidylate kinase;gbkey=CDS;gene=tmk;locus_tag=HP17_03824;product=thymidylate kinase;protein_id=EIE28433.1;transl_table=11 AIHX01000136.1 Genbank gene 8598 9071 . - . ID=gene-HP17_03829;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=HP17_03829 AIHX01000136.1 Genbank CDS 8598 9071 . - 0 ID=cds-EIE28434.1;Parent=gene-HP17_03829;Dbxref=NCBI_GP:EIE28434.1;Name=EIE28434.1;Note=COG0669 Phosphopantetheine adenylyltransferase;gbkey=CDS;gene=coaD;locus_tag=HP17_03829;product=phosphopantetheine adenylyltransferase;protein_id=EIE28434.1;transl_table=11 AIHX01000136.1 Genbank gene 9071 9634 . - . ID=gene-HP17_03834;Name=HP17_03834;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03834 AIHX01000136.1 Genbank CDS 9071 9634 . - 0 ID=cds-EIE28435.1;Parent=gene-HP17_03834;Dbxref=NCBI_GP:EIE28435.1;Name=EIE28435.1;Note=COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase;gbkey=CDS;locus_tag=HP17_03834;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=EIE28435.1;transl_table=11 AIHX01000136.1 Genbank gene 9615 9719 . + . ID=gene-HP17_03839;Name=HP17_03839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03839 AIHX01000136.1 Genbank CDS 9615 9719 . + 0 ID=cds-EIE28436.1;Parent=gene-HP17_03839;Dbxref=NCBI_GP:EIE28436.1;Name=EIE28436.1;gbkey=CDS;locus_tag=HP17_03839;product=Hypothetical protein;protein_id=EIE28436.1;transl_table=11 AIHX01000136.1 Genbank gene 9644 10300 . - . ID=gene-HP17_03844;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=HP17_03844 AIHX01000136.1 Genbank CDS 9644 10300 . - 0 ID=cds-EIE28437.1;Parent=gene-HP17_03844;Dbxref=NCBI_GP:EIE28437.1;Name=EIE28437.1;Note=COG4108 Peptide chain release factor RF-3;gbkey=CDS;gene=flgA;locus_tag=HP17_03844;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=EIE28437.1;transl_table=11 AIHX01000136.1 Genbank gene 10297 12342 . - . ID=gene-HP17_03849;Name=HP17_03849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03849 AIHX01000136.1 Genbank CDS 10297 12342 . - 0 ID=cds-EIE28438.1;Parent=gene-HP17_03849;Dbxref=NCBI_GP:EIE28438.1;Name=EIE28438.1;Note=COG0210 Superfamily I DNA and RNA helicases;gbkey=CDS;locus_tag=HP17_03849;product=DNA helicase II (UvrD);protein_id=EIE28438.1;transl_table=11 AIHX01000136.1 Genbank gene 12342 14876 . - . ID=gene-HP17_03854;Name=HP17_03854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03854 AIHX01000136.1 Genbank CDS 12342 14876 . - 0 ID=cds-EIE28439.1;Parent=gene-HP17_03854;Dbxref=NCBI_GP:EIE28439.1;Name=EIE28439.1;Note=COG0457 FOG: TPR repeat;gbkey=CDS;locus_tag=HP17_03854;product=Hypothetical protein;protein_id=EIE28439.1;transl_table=11 AIHX01000136.1 Genbank gene 14886 16133 . - . ID=gene-HP17_03859;Name=HP17_03859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03859 AIHX01000136.1 Genbank CDS 14886 16133 . - 0 ID=cds-EIE28440.1;Parent=gene-HP17_03859;Dbxref=NCBI_GP:EIE28440.1;Name=EIE28440.1;Note=COG0172 Seryl-tRNA synthetase;gbkey=CDS;locus_tag=HP17_03859;product=seryl-tRNA synthetase;protein_id=EIE28440.1;transl_table=11 AIHX01000136.1 Genbank gene 16134 16931 . - . ID=gene-HP17_03864;Name=HP17_03864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03864 AIHX01000136.1 Genbank CDS 16134 16931 . - 0 ID=cds-EIE28441.1;Parent=gene-HP17_03864;Dbxref=NCBI_GP:EIE28441.1;Name=EIE28441.1;Note=COG0388 Predicted amidohydrolase;gbkey=CDS;locus_tag=HP17_03864;product=Hypothetical protein;protein_id=EIE28441.1;transl_table=11 AIHX01000136.1 Genbank gene 16935 17195 . - . ID=gene-HP17_03869;Name=HP17_03869;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03869 AIHX01000136.1 Genbank CDS 16935 17195 . - 0 ID=cds-EIE28442.1;Parent=gene-HP17_03869;Dbxref=NCBI_GP:EIE28442.1;Name=EIE28442.1;Note=COG1722 Exonuclease VII small subunit;gbkey=CDS;locus_tag=HP17_03869;product=exodeoxyribonuclease VII small subunit;protein_id=EIE28442.1;transl_table=11 AIHX01000136.1 Genbank gene 17205 17945 . - . ID=gene-HP17_03874;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=HP17_03874 AIHX01000136.1 Genbank CDS 17205 17945 . - 0 ID=cds-EIE28443.1;Parent=gene-HP17_03874;Dbxref=NCBI_GP:EIE28443.1;Name=EIE28443.1;Note=COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis;gbkey=CDS;gene=ubiE;locus_tag=HP17_03874;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=EIE28443.1;transl_table=11 AIHX01000136.1 Genbank gene 17972 18418 . - . ID=gene-HP17_03879;Name=HP17_03879;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03879 AIHX01000136.1 Genbank CDS 17972 18418 . - 0 ID=cds-EIE28444.1;Parent=gene-HP17_03879;Dbxref=NCBI_GP:EIE28444.1;Name=EIE28444.1;Note=COG1981 Predicted membrane protein;gbkey=CDS;locus_tag=HP17_03879;product=Hypothetical protein;protein_id=EIE28444.1;transl_table=11 AIHX01000136.1 Genbank gene 18429 19001 . - . ID=gene-HP17_03884;Name=HP17_03884;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03884 AIHX01000136.1 Genbank CDS 18429 19001 . - 0 ID=cds-EIE28445.1;Parent=gene-HP17_03884;Dbxref=NCBI_GP:EIE28445.1;Name=EIE28445.1;Note=COG1739 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_03884;product=X-Pro dipeptidase;protein_id=EIE28445.1;transl_table=11 AIHX01000136.1 Genbank gene 18988 20118 . - . ID=gene-HP17_03889;Name=HP17_03889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03889 AIHX01000136.1 Genbank CDS 18988 20118 . - 0 ID=cds-EIE28446.1;Parent=gene-HP17_03889;Dbxref=NCBI_GP:EIE28446.1;Name=EIE28446.1;Note=COG0842 ABC-type multidrug transport system%2C permease component;gbkey=CDS;locus_tag=HP17_03889;product=antibiotic transport system permease protein;protein_id=EIE28446.1;transl_table=11 AIHX01000136.1 Genbank gene 20115 21212 . - . ID=gene-HP17_03894;Name=HP17_03894;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03894 AIHX01000136.1 Genbank CDS 20115 21212 . - 0 ID=cds-EIE28447.1;Parent=gene-HP17_03894;Dbxref=NCBI_GP:EIE28447.1;Name=EIE28447.1;Note=COG0842 ABC-type multidrug transport system%2C permease component;gbkey=CDS;locus_tag=HP17_03894;product=Hypothetical protein;protein_id=EIE28447.1;transl_table=11 AIHX01000136.1 Genbank gene 21224 22213 . - . ID=gene-HP17_03899;Name=HP17_03899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03899 AIHX01000136.1 Genbank CDS 21224 22213 . - 0 ID=cds-EIE28448.1;Parent=gene-HP17_03899;Dbxref=NCBI_GP:EIE28448.1;Name=EIE28448.1;Note=COG0845 Membrane-fusion protein;gbkey=CDS;locus_tag=HP17_03899;product=Hypothetical protein;protein_id=EIE28448.1;transl_table=11 AIHX01000136.1 Genbank gene 22224 23756 . - . ID=gene-HP17_03904;Name=HP17_03904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03904 AIHX01000136.1 Genbank CDS 22224 23756 . - 0 ID=cds-EIE28449.1;Parent=gene-HP17_03904;Dbxref=NCBI_GP:EIE28449.1;Name=EIE28449.1;Note=COG1538 Outer membrane protein;gbkey=CDS;locus_tag=HP17_03904;product=lipase-like protein;protein_id=EIE28449.1;transl_table=11 AIHX01000136.1 Genbank gene 23772 25109 . - . ID=gene-HP17_03909;Name=HP17_03909;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03909 AIHX01000136.1 Genbank CDS 23772 25109 . - 0 ID=cds-EIE28450.1;Parent=gene-HP17_03909;Dbxref=NCBI_GP:EIE28450.1;Name=EIE28450.1;Note=COG1253 Hemolysins and related proteins containing CBS domains;gbkey=CDS;locus_tag=HP17_03909;product=hemolysin domain-containing protein;protein_id=EIE28450.1;transl_table=11 AIHX01000136.1 Genbank gene 25215 26596 . - . ID=gene-HP17_03914;Name=HP17_03914;end_range=26596,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03914;partial=true AIHX01000136.1 Genbank CDS 25215 26596 . - 2 ID=cds-EIE28451.1;Parent=gene-HP17_03914;Dbxref=NCBI_GP:EIE28451.1;Name=EIE28451.1;Note=COG0306 Phosphate/sulphate permeases;end_range=26596,.;gbkey=CDS;locus_tag=HP17_03914;partial=true;product=phosphate permease;protein_id=EIE28451.1;transl_table=11 ##sequence-region AIHX01000137.1 1 28166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000137.1 Genbank region 1 28166 . + . ID=AIHX01000137.1:1..28166;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000137.1 Genbank gene 1 182 . - . ID=gene-HP17_03919;Name=HP17_03919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03919;partial=true;start_range=.,1 AIHX01000137.1 Genbank CDS 1 182 . - 0 ID=cds-EIE28393.1;Parent=gene-HP17_03919;Dbxref=NCBI_GP:EIE28393.1;Name=EIE28393.1;gbkey=CDS;locus_tag=HP17_03919;partial=true;product=Putative phosphate transporter;protein_id=EIE28393.1;start_range=.,1;transl_table=11 AIHX01000137.1 Genbank gene 323 592 . + . ID=gene-HP17_03924;Name=HP17_03924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03924 AIHX01000137.1 Genbank CDS 323 592 . + 0 ID=cds-EIE28394.1;Parent=gene-HP17_03924;Dbxref=NCBI_GP:EIE28394.1;Name=EIE28394.1;Note=COG0694 Thioredoxin-like proteins and domains;gbkey=CDS;locus_tag=HP17_03924;product=putative nifU-like protein;protein_id=EIE28394.1;transl_table=11 AIHX01000137.1 Genbank gene 604 1215 . + . ID=gene-HP17_03929;Name=HP17_03929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03929 AIHX01000137.1 Genbank CDS 604 1215 . + 0 ID=cds-EIE28395.1;Parent=gene-HP17_03929;Dbxref=NCBI_GP:EIE28395.1;Name=EIE28395.1;gbkey=CDS;locus_tag=HP17_03929;product=Hypothetical protein;protein_id=EIE28395.1;transl_table=11 AIHX01000137.1 Genbank gene 1219 2562 . + . ID=gene-HP17_03934;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=HP17_03934 AIHX01000137.1 Genbank CDS 1219 2562 . + 0 ID=cds-EIE28396.1;Parent=gene-HP17_03934;Dbxref=NCBI_GP:EIE28396.1;Name=EIE28396.1;Note=COG0769 UDP-N-acetylmuramyl tripeptide synthase;gbkey=CDS;gene=murE;locus_tag=HP17_03934;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase;protein_id=EIE28396.1;transl_table=11 AIHX01000137.1 Genbank gene 2566 3516 . + . ID=gene-HP17_03939;Name=HP17_03939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03939 AIHX01000137.1 Genbank CDS 2566 3516 . + 0 ID=cds-EIE28397.1;Parent=gene-HP17_03939;Dbxref=NCBI_GP:EIE28397.1;Name=EIE28397.1;Note=COG0176 Transaldolase;gbkey=CDS;locus_tag=HP17_03939;product=transaldolase;protein_id=EIE28397.1;transl_table=11 AIHX01000137.1 Genbank gene 3571 4107 . + . ID=gene-HP17_03944;Name=HP17_03944;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03944 AIHX01000137.1 Genbank CDS 3571 4107 . + 0 ID=cds-EIE28398.1;Parent=gene-HP17_03944;Dbxref=NCBI_GP:EIE28398.1;Name=EIE28398.1;Note=COG1825 Ribosomal protein L25 (general stress protein Ctc);gbkey=CDS;locus_tag=HP17_03944;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=EIE28398.1;transl_table=11 AIHX01000137.1 Genbank gene 4117 4677 . + . ID=gene-HP17_03949;Name=HP17_03949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03949 AIHX01000137.1 Genbank CDS 4117 4677 . + 0 ID=cds-EIE28399.1;Parent=gene-HP17_03949;Dbxref=NCBI_GP:EIE28399.1;Name=EIE28399.1;Note=COG0193 Peptidyl-tRNA hydrolase;gbkey=CDS;locus_tag=HP17_03949;product=peptidyl-tRNA hydrolase;protein_id=EIE28399.1;transl_table=11 AIHX01000137.1 Genbank gene 4687 5754 . + . ID=gene-HP17_03954;Name=HP17_03954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03954 AIHX01000137.1 Genbank CDS 4687 5754 . + 0 ID=cds-EIE28400.1;Parent=gene-HP17_03954;Dbxref=NCBI_GP:EIE28400.1;Name=EIE28400.1;Note=COG0795 Predicted permeases;gbkey=CDS;locus_tag=HP17_03954;product=Putative permease;protein_id=EIE28400.1;transl_table=11 AIHX01000137.1 Genbank gene 5811 6812 . + . ID=gene-HP17_03959;Name=HP17_03959;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03959 AIHX01000137.1 Genbank CDS 5811 6812 . + 0 ID=cds-EIE28401.1;Parent=gene-HP17_03959;Dbxref=NCBI_GP:EIE28401.1;Name=EIE28401.1;Note=COG3392 Adenine-specific DNA methylase;gbkey=CDS;locus_tag=HP17_03959;product=type II methylase;protein_id=EIE28401.1;transl_table=11 AIHX01000137.1 Genbank gene 6863 7708 . + . ID=gene-HP17_03964;Name=HP17_03964;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03964 AIHX01000137.1 Genbank CDS 6863 7708 . + 0 ID=cds-EIE28402.1;Parent=gene-HP17_03964;Dbxref=NCBI_GP:EIE28402.1;Name=EIE28402.1;Note=COG0338 Site-specific DNA methylase;gbkey=CDS;locus_tag=HP17_03964;product=type II adenine specific DNA methyltransferase;protein_id=EIE28402.1;transl_table=11 AIHX01000137.1 Genbank pseudogene 7714 9331 . + . ID=gene-HP17_03969;Name=HP17_03969;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_03969;pseudo=true AIHX01000137.1 Genbank sequence_feature 7714 9331 . + . ID=id-HP17_03969;Note=potential frameshift: common BLAST hit: gi|298735529|ref|YP_003728050.1| putative endonuclease;gbkey=misc_feature;locus_tag=HP17_03969;pseudo=true AIHX01000137.1 Genbank gene 9386 10552 . - . ID=gene-HP17_03979;Name=HP17_03979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03979 AIHX01000137.1 Genbank CDS 9386 10552 . - 0 ID=cds-EIE28403.1;Parent=gene-HP17_03979;Dbxref=NCBI_GP:EIE28403.1;Name=EIE28403.1;gbkey=CDS;locus_tag=HP17_03979;product=outer membrane protein (omp32);protein_id=EIE28403.1;transl_table=11 AIHX01000137.1 Genbank gene 11178 13529 . - . ID=gene-HP17_03994;Name=HP17_03994;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03994 AIHX01000137.1 Genbank CDS 11178 13529 . - 0 ID=cds-EIE28404.1;Parent=gene-HP17_03994;Dbxref=NCBI_GP:EIE28404.1;Name=EIE28404.1;Note=COG2217 Cation transport ATPase;gbkey=CDS;locus_tag=HP17_03994;product=putative component of cation transport for cbb3-type oxidase;protein_id=EIE28404.1;transl_table=11 AIHX01000137.1 Genbank gene 13554 14270 . - . ID=gene-HP17_03999;Name=HP17_03999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_03999 AIHX01000137.1 Genbank CDS 13554 14270 . - 0 ID=cds-EIE28405.1;Parent=gene-HP17_03999;Dbxref=NCBI_GP:EIE28405.1;Name=EIE28405.1;Note=COG4123 Predicted O-methyltransferase;gbkey=CDS;locus_tag=HP17_03999;product=Hypothetical protein;protein_id=EIE28405.1;transl_table=11 AIHX01000137.1 Genbank gene 14252 15286 . - . ID=gene-HP17_04004;Name=HP17_04004;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04004 AIHX01000137.1 Genbank CDS 14252 15286 . - 0 ID=cds-EIE28406.1;Parent=gene-HP17_04004;Dbxref=NCBI_GP:EIE28406.1;Name=EIE28406.1;Note=COG0117 Pyrimidine deaminase;gbkey=CDS;locus_tag=HP17_04004;product=riboflavin biosynthesis protein;protein_id=EIE28406.1;transl_table=11 AIHX01000137.1 Genbank gene 15283 16509 . - . ID=gene-HP17_04009;Name=HP17_04009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04009 AIHX01000137.1 Genbank CDS 15283 16509 . - 0 ID=cds-EIE28407.1;Parent=gene-HP17_04009;Dbxref=NCBI_GP:EIE28407.1;Name=EIE28407.1;Note=COG0786 Na+/glutamate symporter;gbkey=CDS;locus_tag=HP17_04009;product=sodium/glutamate symport carrier protein/glutamate permease;protein_id=EIE28407.1;transl_table=11 AIHX01000137.1 Genbank gene 16595 17794 . + . ID=gene-HP17_04014;Name=HP17_04014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04014 AIHX01000137.1 Genbank CDS 16595 17794 . + 0 ID=cds-EIE28408.1;Parent=gene-HP17_04014;Dbxref=NCBI_GP:EIE28408.1;Name=EIE28408.1;Note=COG1748 Saccharopine dehydrogenase and related proteins;gbkey=CDS;locus_tag=HP17_04014;product=saccharopine dehydrogenase;protein_id=EIE28408.1;transl_table=11 AIHX01000137.1 Genbank gene 17804 19180 . - . ID=gene-HP17_04019;Name=HP17_04019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04019 AIHX01000137.1 Genbank CDS 17804 19180 . - 0 ID=cds-EIE28409.1;Parent=gene-HP17_04019;Dbxref=NCBI_GP:EIE28409.1;Name=EIE28409.1;Note=COG0348 Polyferredoxin;gbkey=CDS;locus_tag=HP17_04019;product=ferrodoxin-like protein;protein_id=EIE28409.1;transl_table=11 AIHX01000137.1 Genbank gene 19286 19948 . + . ID=gene-HP17_04024;Name=HP17_04024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04024 AIHX01000137.1 Genbank CDS 19286 19948 . + 0 ID=cds-EIE28410.1;Parent=gene-HP17_04024;Dbxref=NCBI_GP:EIE28410.1;Name=EIE28410.1;Note=COG0344 Predicted membrane protein;gbkey=CDS;locus_tag=HP17_04024;product=putative glycerol-3-phosphate acyltransferase PlsY;protein_id=EIE28410.1;transl_table=11 AIHX01000137.1 Genbank gene 19945 20298 . + . ID=gene-HP17_04029;Name=HP17_04029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04029 AIHX01000137.1 Genbank CDS 19945 20298 . + 0 ID=cds-EIE28411.1;Parent=gene-HP17_04029;Dbxref=NCBI_GP:EIE28411.1;Name=EIE28411.1;Note=COG1539 Dihydroneopterin aldolase;gbkey=CDS;locus_tag=HP17_04029;product=Hypothetical protein;protein_id=EIE28411.1;transl_table=11 AIHX01000137.1 Genbank gene 20282 20608 . + . ID=gene-HP17_04034;Name=HP17_04034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04034 AIHX01000137.1 Genbank CDS 20282 20608 . + 0 ID=cds-EIE28412.1;Parent=gene-HP17_04034;Dbxref=NCBI_GP:EIE28412.1;Name=EIE28412.1;gbkey=CDS;locus_tag=HP17_04034;product=FrpB-like protein;protein_id=EIE28412.1;transl_table=11 AIHX01000137.1 Genbank gene 20777 23416 . + . ID=gene-HP17_04039;Name=HP17_04039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04039 AIHX01000137.1 Genbank CDS 20777 23416 . + 0 ID=cds-EIE28413.1;Parent=gene-HP17_04039;Dbxref=NCBI_GP:EIE28413.1;Name=EIE28413.1;Note=COG1629 Outer membrane receptor proteins%2C mostly Fe transport;gbkey=CDS;locus_tag=HP17_04039;product=iron-regulated outer membrane protein;protein_id=EIE28413.1;transl_table=11 AIHX01000137.1 Genbank gene 23468 23563 . + . ID=gene-HP17_04044;Name=HP17_04044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04044 AIHX01000137.1 Genbank CDS 23468 23563 . + 0 ID=cds-EIE28414.1;Parent=gene-HP17_04044;Dbxref=NCBI_GP:EIE28414.1;Name=EIE28414.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_04044;product=Hypothetical protein;protein_id=EIE28414.1;transl_table=11 AIHX01000137.1 Genbank gene 23644 24804 . + . ID=gene-HP17_04049;Name=HP17_04049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04049 AIHX01000137.1 Genbank CDS 23644 24804 . + 0 ID=cds-EIE28415.1;Parent=gene-HP17_04049;Dbxref=NCBI_GP:EIE28415.1;Name=EIE28415.1;Note=COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase];gbkey=CDS;locus_tag=HP17_04049;product=selenocysteine synthase;protein_id=EIE28415.1;transl_table=11 AIHX01000137.1 Genbank gene 24900 26087 . + . ID=gene-HP17_04054;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HP17_04054 AIHX01000137.1 Genbank CDS 24900 26087 . + 0 ID=cds-EIE28416.1;Parent=gene-HP17_04054;Dbxref=NCBI_GP:EIE28416.1;Name=EIE28416.1;Note=COG0195 Transcription elongation factor;gbkey=CDS;gene=nusA;locus_tag=HP17_04054;product=transcription elongation factor NusA;protein_id=EIE28416.1;transl_table=11 AIHX01000137.1 Genbank gene 27037 27474 . - . ID=gene-HP17_04069;Name=HP17_04069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04069 AIHX01000137.1 Genbank CDS 27037 27474 . - 0 ID=cds-EIE28417.1;Parent=gene-HP17_04069;Dbxref=NCBI_GP:EIE28417.1;Name=EIE28417.1;Note=COG3600 Uncharacterized phage-associated protein;gbkey=CDS;locus_tag=HP17_04069;product=phage-associated protein;protein_id=EIE28417.1;transl_table=11 AIHX01000137.1 Genbank gene 27825 27944 . + . ID=gene-HP17_04074;Name=HP17_04074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04074 AIHX01000137.1 Genbank CDS 27825 27944 . + 0 ID=cds-EIE28418.1;Parent=gene-HP17_04074;Dbxref=NCBI_GP:EIE28418.1;Name=EIE28418.1;Note=not present in 26695~not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_04074;product=Hypothetical protein;protein_id=EIE28418.1;transl_table=11 AIHX01000137.1 Genbank gene 27976 28166 . - . ID=gene-HP17_04079;Name=HP17_04079;end_range=28166,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04079;partial=true AIHX01000137.1 Genbank CDS 27976 28166 . - 2 ID=cds-EIE28419.1;Parent=gene-HP17_04079;Dbxref=NCBI_GP:EIE28419.1;Name=EIE28419.1;end_range=28166,.;gbkey=CDS;locus_tag=HP17_04079;partial=true;product=type II S restriction-modification protein;protein_id=EIE28419.1;transl_table=11 ##sequence-region AIHX01000138.1 1 7174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000138.1 Genbank region 1 7174 . + . ID=AIHX01000138.1:1..7174;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000138.1 Genbank gene 1 3541 . - . ID=gene-HP17_04084;Name=HP17_04084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04084;partial=true;start_range=.,1 AIHX01000138.1 Genbank CDS 1 3541 . - 0 ID=cds-EIE28379.1;Parent=gene-HP17_04084;Dbxref=NCBI_GP:EIE28379.1;Name=EIE28379.1;Note=COG1002 Type II restriction enzyme%2C methylase subunits;gbkey=CDS;locus_tag=HP17_04084;partial=true;product=type IIS restriction-modification protein;protein_id=EIE28379.1;start_range=.,1;transl_table=11 AIHX01000138.1 Genbank pseudogene 3650 6561 . - . ID=gene-HP17_04089;Name=HP17_04089;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_04089;pseudo=true AIHX01000138.1 Genbank sequence_feature 3650 6561 . - . ID=id-HP17_04089;Note=potential frameshift: common BLAST hit: gi|298735509|ref|YP_003728030.1| type III restriction enzyme;gbkey=misc_feature;locus_tag=HP17_04089;pseudo=true AIHX01000138.1 Genbank gene 6564 7174 . - . ID=gene-HP17_04099;Name=HP17_04099;end_range=7174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04099;partial=true AIHX01000138.1 Genbank CDS 6564 7174 . - 2 ID=cds-EIE28380.1;Parent=gene-HP17_04099;Dbxref=NCBI_GP:EIE28380.1;Name=EIE28380.1;Note=COG2189 Adenine specific DNA methylase Mod;end_range=7174,.;gbkey=CDS;locus_tag=HP17_04099;partial=true;product=type III R-M system modification enzyme;protein_id=EIE28380.1;transl_table=11 ##sequence-region AIHX01000139.1 1 24148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000139.1 Genbank region 1 24148 . + . ID=AIHX01000139.1:1..24148;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000139.1 Genbank gene 1 1333 . - . ID=gene-HP17_04104;Name=HP17_04104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04104;partial=true;start_range=.,1 AIHX01000139.1 Genbank CDS 1 1333 . - 0 ID=cds-EIE28359.1;Parent=gene-HP17_04104;Dbxref=NCBI_GP:EIE28359.1;Name=EIE28359.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_04104;partial=true;product=type III R-M system modification enzyme;protein_id=EIE28359.1;start_range=.,1;transl_table=11 AIHX01000139.1 Genbank gene 1390 3261 . - . ID=gene-HP17_04109;Name=HP17_04109;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04109 AIHX01000139.1 Genbank CDS 1390 3261 . - 0 ID=cds-EIE28360.1;Parent=gene-HP17_04109;Dbxref=NCBI_GP:EIE28360.1;Name=EIE28360.1;Note=COG1200 RecG-like helicase;gbkey=CDS;locus_tag=HP17_04109;product=ATP-dependent DNA helicase RecG;protein_id=EIE28360.1;transl_table=11 AIHX01000139.1 Genbank gene 3343 3696 . + . ID=gene-HP17_04114;Name=HP17_04114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04114 AIHX01000139.1 Genbank CDS 3343 3696 . + 0 ID=cds-EIE28361.1;Parent=gene-HP17_04114;Dbxref=NCBI_GP:EIE28361.1;Name=EIE28361.1;gbkey=CDS;locus_tag=HP17_04114;product=Hypothetical protein;protein_id=EIE28361.1;transl_table=11 AIHX01000139.1 Genbank gene 3700 4335 . + . ID=gene-HP17_04119;Name=HP17_04119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04119 AIHX01000139.1 Genbank CDS 3700 4335 . + 0 ID=cds-EIE28362.1;Parent=gene-HP17_04119;Dbxref=NCBI_GP:EIE28362.1;Name=EIE28362.1;gbkey=CDS;locus_tag=HP17_04119;product=Hypothetical protein;protein_id=EIE28362.1;transl_table=11 AIHX01000139.1 Genbank gene 4332 5084 . - . ID=gene-HP17_04124;Name=HP17_04124;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04124 AIHX01000139.1 Genbank CDS 4332 5084 . - 0 ID=cds-EIE28363.1;Parent=gene-HP17_04124;Dbxref=NCBI_GP:EIE28363.1;Name=EIE28363.1;Note=COG0708 Exonuclease III;gbkey=CDS;locus_tag=HP17_04124;product=exodeoxyribonuclease III;protein_id=EIE28363.1;transl_table=11 AIHX01000139.1 Genbank gene 5186 5261 . + . ID=gene-HP17_t04211;Name=HP17_t04211;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04211 AIHX01000139.1 Genbank tRNA 5186 5261 . + . ID=rna-HP17_t04211;Parent=gene-HP17_t04211;gbkey=tRNA;locus_tag=HP17_t04211;product=tRNA-Phe AIHX01000139.1 Genbank exon 5186 5261 . + . ID=exon-HP17_t04211-1;Parent=rna-HP17_t04211;gbkey=tRNA;locus_tag=HP17_t04211;product=tRNA-Phe AIHX01000139.1 Genbank gene 5263 6702 . - . ID=gene-HP17_04129;Name=HP17_04129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04129 AIHX01000139.1 Genbank CDS 5263 6702 . - 0 ID=cds-EIE28364.1;Parent=gene-HP17_04129;Dbxref=NCBI_GP:EIE28364.1;Name=EIE28364.1;gbkey=CDS;locus_tag=HP17_04129;product=Hypothetical protein;protein_id=EIE28364.1;transl_table=11 AIHX01000139.1 Genbank pseudogene 6922 8288 . - . ID=gene-HP17_04134;Name=HP17_04134;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_04134;pseudo=true AIHX01000139.1 Genbank sequence_feature 6922 8288 . - . ID=id-HP17_04134;Note=potential frameshift: common BLAST hit: gi|108563812|ref|YP_628128.1| chromosomal replication initiation protein;gbkey=misc_feature;locus_tag=HP17_04134;pseudo=true AIHX01000139.1 Genbank gene 8441 8983 . + . ID=gene-HP17_04144;Name=HP17_04144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04144 AIHX01000139.1 Genbank CDS 8441 8983 . + 0 ID=cds-EIE28365.1;Parent=gene-HP17_04144;Dbxref=NCBI_GP:EIE28365.1;Name=EIE28365.1;Note=COG0813 Purine-nucleoside phosphorylase;gbkey=CDS;locus_tag=HP17_04144;product=purine nucleoside phosphorylase (punB);protein_id=EIE28365.1;transl_table=11 AIHX01000139.1 Genbank gene 9028 9267 . + . ID=gene-HP17_04149;Name=HP17_04149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04149 AIHX01000139.1 Genbank CDS 9028 9267 . + 0 ID=cds-EIE28366.1;Parent=gene-HP17_04149;Dbxref=NCBI_GP:EIE28366.1;Name=EIE28366.1;gbkey=CDS;locus_tag=HP17_04149;product=Hypothetical protein;protein_id=EIE28366.1;transl_table=11 AIHX01000139.1 Genbank gene 9268 11061 . + . ID=gene-HP17_04154;Name=HP17_04154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04154 AIHX01000139.1 Genbank CDS 9268 11061 . + 0 ID=cds-EIE28367.1;Parent=gene-HP17_04154;Dbxref=NCBI_GP:EIE28367.1;Name=EIE28367.1;Note=COG0449 Glucosamine 6-phosphate synthetase%2C contains amidotransferase and phosphosugar isomerase domains;gbkey=CDS;locus_tag=HP17_04154;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=EIE28367.1;transl_table=11 AIHX01000139.1 Genbank gene 11085 11711 . + . ID=gene-HP17_04159;Name=thyX;gbkey=Gene;gene=thyX;gene_biotype=protein_coding;locus_tag=HP17_04159 AIHX01000139.1 Genbank CDS 11085 11711 . + 0 ID=cds-EIE28368.1;Parent=gene-HP17_04159;Dbxref=NCBI_GP:EIE28368.1;Name=EIE28368.1;Note=COG1351 Predicted alternative thymidylate synthase;gbkey=CDS;gene=thyX;locus_tag=HP17_04159;product=FAD-dependent thymidylate synthase;protein_id=EIE28368.1;transl_table=11 AIHX01000139.1 Genbank gene 11861 11953 . + . ID=gene-HP17_04164;Name=HP17_04164;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04164 AIHX01000139.1 Genbank CDS 11861 11953 . + 0 ID=cds-EIE28369.1;Parent=gene-HP17_04164;Dbxref=NCBI_GP:EIE28369.1;Name=EIE28369.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_04164;product=Hypothetical protein;protein_id=EIE28369.1;transl_table=11 AIHX01000139.1 Genbank gene 12054 13250 . - . ID=gene-HP17_04169;Name=HP17_04169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04169 AIHX01000139.1 Genbank CDS 12054 13250 . - 0 ID=cds-EIE28370.1;Parent=gene-HP17_04169;Dbxref=NCBI_GP:EIE28370.1;Name=EIE28370.1;Note=COG0732 Restriction endonuclease S subunits;gbkey=CDS;locus_tag=HP17_04169;product=restriction modification system DNA specificity domain protein;protein_id=EIE28370.1;transl_table=11 AIHX01000139.1 Genbank gene 13255 15708 . - . ID=gene-HP17_04174;Name=HP17_04174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04174 AIHX01000139.1 Genbank CDS 13255 15708 . - 0 ID=cds-EIE28371.1;Parent=gene-HP17_04174;Dbxref=NCBI_GP:EIE28371.1;Name=EIE28371.1;Note=COG0286 Type I restriction-modification system methyltransferase subunit;gbkey=CDS;locus_tag=HP17_04174;product=type I restriction enzyme M protein (hsdM);protein_id=EIE28371.1;transl_table=11 AIHX01000139.1 Genbank gene 15778 18741 . + . ID=gene-HP17_04179;Name=HP17_04179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04179 AIHX01000139.1 Genbank CDS 15778 18741 . + 0 ID=cds-EIE28372.1;Parent=gene-HP17_04179;Dbxref=NCBI_GP:EIE28372.1;Name=EIE28372.1;Note=COG0610 Type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases;gbkey=CDS;locus_tag=HP17_04179;product=type I restriction-modification enzyme subunit R;protein_id=EIE28372.1;transl_table=11 AIHX01000139.1 Genbank gene 18741 19448 . + . ID=gene-HP17_04184;Name=HP17_04184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04184 AIHX01000139.1 Genbank CDS 18741 19448 . + 0 ID=cds-EIE28373.1;Parent=gene-HP17_04184;Dbxref=NCBI_GP:EIE28373.1;Name=EIE28373.1;Note=COG1451 Predicted metal-dependent hydrolase;gbkey=CDS;locus_tag=HP17_04184;product=Hypothetical protein;protein_id=EIE28373.1;transl_table=11 AIHX01000139.1 Genbank gene 19547 22072 . - . ID=gene-HP17_04189;Name=HP17_04189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04189 AIHX01000139.1 Genbank CDS 19547 22072 . - 0 ID=cds-EIE28374.1;Parent=gene-HP17_04189;Dbxref=NCBI_GP:EIE28374.1;Name=EIE28374.1;Note=COG1629 Outer membrane receptor proteins%2C mostly Fe transport;gbkey=CDS;locus_tag=HP17_04189;product=iron (III) dicitrate transport protein;protein_id=EIE28374.1;transl_table=11 AIHX01000139.1 Genbank gene 22129 22272 . - . ID=gene-HP17_04194;Name=HP17_04194;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04194 AIHX01000139.1 Genbank CDS 22129 22272 . - 0 ID=cds-EIE28375.1;Parent=gene-HP17_04194;Dbxref=NCBI_GP:EIE28375.1;Name=EIE28375.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_04194;product=Hypothetical protein;protein_id=EIE28375.1;transl_table=11 AIHX01000139.1 Genbank gene 22423 23391 . - . ID=gene-HP17_04199;Name=HP17_04199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04199 AIHX01000139.1 Genbank CDS 22423 23391 . - 0 ID=cds-EIE28376.1;Parent=gene-HP17_04199;Dbxref=NCBI_GP:EIE28376.1;Name=EIE28376.1;Note=COG0010 Arginase/agmatinase/formimionoglutamate hydrolase%2C arginase family;gbkey=CDS;locus_tag=HP17_04199;product=arginase;protein_id=EIE28376.1;transl_table=11 AIHX01000139.1 Genbank gene 23596 24148 . + . ID=gene-HP17_04204;Name=HP17_04204;end_range=24148,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04204;partial=true AIHX01000139.1 Genbank CDS 23596 24148 . + 0 ID=cds-EIE28377.1;Parent=gene-HP17_04204;Dbxref=NCBI_GP:EIE28377.1;Name=EIE28377.1;Note=COG0686 Alanine dehydrogenase;end_range=24148,.;gbkey=CDS;locus_tag=HP17_04204;partial=true;product=alanine dehydrogenase;protein_id=EIE28377.1;transl_table=11 ##sequence-region AIHX01000140.1 1 223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000140.1 Genbank region 1 223 . + . ID=AIHX01000140.1:1..223;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000140.1 Genbank gene 3 223 . + . ID=gene-HP17_04211;Name=HP17_04211;end_range=223,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04211;partial=true AIHX01000140.1 Genbank CDS 3 223 . + 0 ID=cds-EIE28348.1;Parent=gene-HP17_04211;Dbxref=NCBI_GP:EIE28348.1;Name=EIE28348.1;end_range=223,.;gbkey=CDS;locus_tag=HP17_04211;partial=true;product=alanine dehydrogenase;protein_id=EIE28348.1;transl_table=11 ##sequence-region AIHX01000141.1 1 375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000141.1 Genbank region 1 375 . + . ID=AIHX01000141.1:1..375;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000141.1 Genbank gene 1 295 . + . ID=gene-HP17_04216;Name=HP17_04216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04216;partial=true;start_range=.,1 AIHX01000141.1 Genbank CDS 1 295 . + 1 ID=cds-EIE28346.1;Parent=gene-HP17_04216;Dbxref=NCBI_GP:EIE28346.1;Name=EIE28346.1;Note=COG0686 Alanine dehydrogenase;gbkey=CDS;locus_tag=HP17_04216;partial=true;product=alanine dehydrogenase;protein_id=EIE28346.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000142.1 1 2208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000142.1 Genbank region 1 2208 . + . ID=AIHX01000142.1:1..2208;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000142.1 Genbank gene 34 1791 . + . ID=gene-HP17_04221;Name=HP17_04221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04221 AIHX01000142.1 Genbank CDS 34 1791 . + 0 ID=cds-EIE28338.1;Parent=gene-HP17_04221;Dbxref=NCBI_GP:EIE28338.1;Name=EIE28338.1;Note=COG1479 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_04221;product=Hypothetical protein;protein_id=EIE28338.1;transl_table=11 AIHX01000142.1 Genbank gene 1802 2208 . - . ID=gene-HP17_04226;Name=HP17_04226;end_range=2208,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04226;partial=true AIHX01000142.1 Genbank CDS 1802 2208 . - 2 ID=cds-EIE28339.1;Parent=gene-HP17_04226;Dbxref=NCBI_GP:EIE28339.1;Name=EIE28339.1;end_range=2208,.;gbkey=CDS;locus_tag=HP17_04226;partial=true;product=outer membrane protein;protein_id=EIE28339.1;transl_table=11 ##sequence-region AIHX01000143.1 1 8055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000143.1 Genbank region 1 8055 . + . ID=AIHX01000143.1:1..8055;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000143.1 Genbank gene 1 697 . - . ID=gene-HP17_00335;Name=HP17_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00335;partial=true;start_range=.,1 AIHX01000143.1 Genbank CDS 1 697 . - 0 ID=cds-EIE28316.1;Parent=gene-HP17_00335;Dbxref=NCBI_GP:EIE28316.1;Name=EIE28316.1;Note=COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C beta subunit;gbkey=CDS;locus_tag=HP17_00335;partial=true;product=pyruvate ferredoxin oxidoreductase%2C beta subunit;protein_id=EIE28316.1;start_range=.,1;transl_table=11 AIHX01000143.1 Genbank gene 710 1933 . - . ID=gene-HP17_00340;Name=porA;gbkey=Gene;gene=porA;gene_biotype=protein_coding;locus_tag=HP17_00340 AIHX01000143.1 Genbank CDS 710 1933 . - 0 ID=cds-EIE28317.1;Parent=gene-HP17_00340;Dbxref=NCBI_GP:EIE28317.1;Name=EIE28317.1;Note=COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C alpha subunit;gbkey=CDS;gene=porA;locus_tag=HP17_00340;product=pyruvate flavodoxin oxidoreductase subunit alpha;protein_id=EIE28317.1;transl_table=11 AIHX01000143.1 Genbank gene 1943 2335 . - . ID=gene-HP17_00345;Name=porD;gbkey=Gene;gene=porD;gene_biotype=protein_coding;locus_tag=HP17_00345 AIHX01000143.1 Genbank CDS 1943 2335 . - 0 ID=cds-EIE28318.1;Parent=gene-HP17_00345;Dbxref=NCBI_GP:EIE28318.1;Name=EIE28318.1;Note=COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C delta subunit;gbkey=CDS;gene=porD;locus_tag=HP17_00345;product=pyruvate flavodoxin oxidoreductase subunit delta;protein_id=EIE28318.1;transl_table=11 AIHX01000143.1 Genbank gene 2351 2911 . - . ID=gene-HP17_00350;Name=HP17_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00350 AIHX01000143.1 Genbank CDS 2351 2911 . - 0 ID=cds-EIE28319.1;Parent=gene-HP17_00350;Dbxref=NCBI_GP:EIE28319.1;Name=EIE28319.1;Note=COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C gamma subunit;gbkey=CDS;locus_tag=HP17_00350;product=pyruvate flavodoxin oxidoreductase subunit gamma;protein_id=EIE28319.1;transl_table=11 AIHX01000143.1 Genbank gene 3187 3849 . + . ID=gene-HP17_00355;Name=HP17_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00355 AIHX01000143.1 Genbank CDS 3187 3849 . + 0 ID=cds-EIE28320.1;Parent=gene-HP17_00355;Dbxref=NCBI_GP:EIE28320.1;Name=EIE28320.1;gbkey=CDS;locus_tag=HP17_00355;product=outer membrane protein HorH;protein_id=EIE28320.1;transl_table=11 AIHX01000143.1 Genbank gene 3856 5163 . - . ID=gene-HP17_00360;Name=HP17_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00360 AIHX01000143.1 Genbank CDS 3856 5163 . - 0 ID=cds-EIE28321.1;Parent=gene-HP17_00360;Dbxref=NCBI_GP:EIE28321.1;Name=EIE28321.1;gbkey=CDS;locus_tag=HP17_00360;product=Hypothetical protein;protein_id=EIE28321.1;transl_table=11 AIHX01000143.1 Genbank gene 5345 6640 . + . ID=gene-HP17_00365;Name=HP17_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00365 AIHX01000143.1 Genbank CDS 5345 6640 . + 0 ID=cds-EIE28322.1;Parent=gene-HP17_00365;Dbxref=NCBI_GP:EIE28322.1;Name=EIE28322.1;Note=COG1442 Lipopolysaccharide biosynthesis proteins%2C LPS:glycosyltransferases;gbkey=CDS;locus_tag=HP17_00365;product=LPS biosynthesis protein;protein_id=EIE28322.1;transl_table=11 AIHX01000143.1 Genbank gene 6652 7698 . - . ID=gene-HP17_00370;Name=HP17_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00370 AIHX01000143.1 Genbank CDS 6652 7698 . - 0 ID=cds-EIE28323.1;Parent=gene-HP17_00370;Dbxref=NCBI_GP:EIE28323.1;Name=EIE28323.1;Note=COG1064 Zn-dependent alcohol dehydrogenases;gbkey=CDS;locus_tag=HP17_00370;product=NADP-dependent alcohol dehydrogenase;protein_id=EIE28323.1;transl_table=11 AIHX01000143.1 Genbank gene 7868 8055 . - . ID=gene-HP17_00375;Name=glk;end_range=8055,.;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=HP17_00375;partial=true AIHX01000143.1 Genbank CDS 7868 8055 . - 2 ID=cds-EIE28324.1;Parent=gene-HP17_00375;Dbxref=NCBI_GP:EIE28324.1;Name=EIE28324.1;Note=COG0837 Glucokinase;end_range=8055,.;gbkey=CDS;gene=glk;locus_tag=HP17_00375;partial=true;product=glucokinase;protein_id=EIE28324.1;transl_table=11 ##sequence-region AIHX01000144.1 1 23602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000144.1 Genbank region 1 23602 . + . ID=AIHX01000144.1:1..23602;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000144.1 Genbank gene 75 242 . - . ID=gene-HP17_04236;Name=HP17_04236;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04236 AIHX01000144.1 Genbank CDS 75 242 . - 0 ID=cds-EIE28281.1;Parent=gene-HP17_04236;Dbxref=NCBI_GP:EIE28281.1;Name=EIE28281.1;gbkey=CDS;locus_tag=HP17_04236;product=Hypothetical protein;protein_id=EIE28281.1;transl_table=11 AIHX01000144.1 Genbank gene 264 1118 . + . ID=gene-HP17_04241;Name=HP17_04241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04241 AIHX01000144.1 Genbank CDS 264 1118 . + 0 ID=cds-EIE28282.1;Parent=gene-HP17_04241;Dbxref=NCBI_GP:EIE28282.1;Name=EIE28282.1;Note=COG0061 Predicted sugar kinase;gbkey=CDS;locus_tag=HP17_04241;product=putative inorganic polyphosphate/ATP-NAD kinase;protein_id=EIE28282.1;transl_table=11 AIHX01000144.1 Genbank gene 1131 2705 . + . ID=gene-HP17_04246;Name=HP17_04246;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04246 AIHX01000144.1 Genbank CDS 1131 2705 . + 0 ID=cds-EIE28283.1;Parent=gene-HP17_04246;Dbxref=NCBI_GP:EIE28283.1;Name=EIE28283.1;Note=COG0497 ATPase involved in DNA repair;gbkey=CDS;locus_tag=HP17_04246;product=DNA repair protein;protein_id=EIE28283.1;transl_table=11 AIHX01000144.1 Genbank gene 2702 4009 . + . ID=gene-HP17_04251;Name=HP17_04251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04251 AIHX01000144.1 Genbank CDS 2702 4009 . + 0 ID=cds-EIE28284.1;Parent=gene-HP17_04251;Dbxref=NCBI_GP:EIE28284.1;Name=EIE28284.1;Note=COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP;gbkey=CDS;locus_tag=HP17_04251;product=Hypothetical protein;protein_id=EIE28284.1;transl_table=11 AIHX01000144.1 Genbank gene 4028 4324 . + . ID=gene-HP17_04256;Name=HP17_04256;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04256 AIHX01000144.1 Genbank CDS 4028 4324 . + 0 ID=cds-EIE28285.1;Parent=gene-HP17_04256;Dbxref=NCBI_GP:EIE28285.1;Name=EIE28285.1;gbkey=CDS;locus_tag=HP17_04256;product=Hypothetical protein;protein_id=EIE28285.1;transl_table=11 AIHX01000144.1 Genbank gene 4461 5438 . + . ID=gene-HP17_04261;Name=HP17_04261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04261 AIHX01000144.1 Genbank CDS 4461 5438 . + 0 ID=cds-EIE28286.1;Parent=gene-HP17_04261;Dbxref=NCBI_GP:EIE28286.1;Name=EIE28286.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_04261;product=Cysteine-rich protein G;protein_id=EIE28286.1;transl_table=11 AIHX01000144.1 Genbank gene 5477 6340 . - . ID=gene-HP17_04266;Name=HP17_04266;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04266 AIHX01000144.1 Genbank CDS 5477 6340 . - 0 ID=cds-EIE28287.1;Parent=gene-HP17_04266;Dbxref=NCBI_GP:EIE28287.1;Name=EIE28287.1;Note=COG0847 DNA polymerase III%2C epsilon subunit and related 3'-5' exonucleases;gbkey=CDS;locus_tag=HP17_04266;product=DNA polymerase III subunit epsilon;protein_id=EIE28287.1;transl_table=11 AIHX01000144.1 Genbank gene 6318 6971 . - . ID=gene-HP17_04271;Name=HP17_04271;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04271 AIHX01000144.1 Genbank CDS 6318 6971 . - 0 ID=cds-EIE28288.1;Parent=gene-HP17_04271;Dbxref=NCBI_GP:EIE28288.1;Name=EIE28288.1;Note=COG0036 Pentose-5-phosphate-3-epimerase;gbkey=CDS;locus_tag=HP17_04271;product=ribulose-phosphate 3-epimerase;protein_id=EIE28288.1;transl_table=11 AIHX01000144.1 Genbank gene 7042 7914 . + . ID=gene-HP17_04276;Name=HP17_04276;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04276 AIHX01000144.1 Genbank CDS 7042 7914 . + 0 ID=cds-EIE28289.1;Parent=gene-HP17_04276;Dbxref=NCBI_GP:EIE28289.1;Name=EIE28289.1;Note=COG0158 Fructose-1%2C6-bisphosphatase;gbkey=CDS;locus_tag=HP17_04276;product=fructose-1%2C6-bisphosphatase;protein_id=EIE28289.1;transl_table=11 AIHX01000144.1 Genbank gene 7914 8117 . + . ID=gene-HP17_04281;Name=HP17_04281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04281 AIHX01000144.1 Genbank CDS 7914 8117 . + 0 ID=cds-EIE28290.1;Parent=gene-HP17_04281;Dbxref=NCBI_GP:EIE28290.1;Name=EIE28290.1;gbkey=CDS;locus_tag=HP17_04281;product=Hypothetical protein;protein_id=EIE28290.1;transl_table=11 AIHX01000144.1 Genbank gene 8130 9026 . + . ID=gene-HP17_04286;Name=HP17_04286;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04286 AIHX01000144.1 Genbank CDS 8130 9026 . + 0 ID=cds-EIE28291.1;Parent=gene-HP17_04286;Dbxref=NCBI_GP:EIE28291.1;Name=EIE28291.1;Note=COG0827 Adenine-specific DNA methylase;gbkey=CDS;locus_tag=HP17_04286;product=putative type II methylase protein;protein_id=EIE28291.1;transl_table=11 AIHX01000144.1 Genbank gene 9019 9750 . + . ID=gene-HP17_04291;Name=HP17_04291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04291 AIHX01000144.1 Genbank CDS 9019 9750 . + 0 ID=cds-EIE28292.1;Parent=gene-HP17_04291;Dbxref=NCBI_GP:EIE28292.1;Name=EIE28292.1;gbkey=CDS;locus_tag=HP17_04291;product=Hypothetical protein;protein_id=EIE28292.1;transl_table=11 AIHX01000144.1 Genbank gene 9870 10727 . - . ID=gene-HP17_04296;Name=HP17_04296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04296 AIHX01000144.1 Genbank CDS 9870 10727 . - 0 ID=cds-EIE28293.1;Parent=gene-HP17_04296;Dbxref=NCBI_GP:EIE28293.1;Name=EIE28293.1;Note=COG2857 Cytochrome c1;gbkey=CDS;locus_tag=HP17_04296;product=ubiquinol cytochrome c oxidoreductase%2C cytochrome c1 subunit;protein_id=EIE28293.1;transl_table=11 AIHX01000144.1 Genbank gene 10724 11962 . - . ID=gene-HP17_04301;Name=HP17_04301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04301 AIHX01000144.1 Genbank CDS 10724 11962 . - 0 ID=cds-EIE28294.1;Parent=gene-HP17_04301;Dbxref=NCBI_GP:EIE28294.1;Name=EIE28294.1;Note=COG1290 Cytochrome b subunit of the bc complex;gbkey=CDS;locus_tag=HP17_04301;product=ubiquinol-cytochrome c reductase cytochrome b subunit;protein_id=EIE28294.1;transl_table=11 AIHX01000144.1 Genbank gene 11973 12476 . - . ID=gene-HP17_04306;Name=HP17_04306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04306 AIHX01000144.1 Genbank CDS 11973 12476 . - 0 ID=cds-EIE28295.1;Parent=gene-HP17_04306;Dbxref=NCBI_GP:EIE28295.1;Name=EIE28295.1;Note=COG0723 Rieske Fe-S protein;gbkey=CDS;locus_tag=HP17_04306;product=ubiquinol-cytochrome c reductase%2C iron-sulfur subunit;protein_id=EIE28295.1;transl_table=11 AIHX01000144.1 Genbank gene 12602 15601 . - . ID=gene-HP17_04311;Name=HP17_04311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04311 AIHX01000144.1 Genbank CDS 12602 15601 . - 0 ID=cds-EIE28296.1;Parent=gene-HP17_04311;Dbxref=NCBI_GP:EIE28296.1;Name=EIE28296.1;Note=COG1197 Transcription-repair coupling factor (superfamily II helicase);gbkey=CDS;locus_tag=HP17_04311;product=transcription-repair coupling factor;protein_id=EIE28296.1;transl_table=11 AIHX01000144.1 Genbank gene 15605 16015 . - . ID=gene-HP17_04316;Name=HP17_04316;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04316 AIHX01000144.1 Genbank CDS 15605 16015 . - 0 ID=cds-EIE28297.1;Parent=gene-HP17_04316;Dbxref=NCBI_GP:EIE28297.1;Name=EIE28297.1;Note=COG1664 Integral membrane protein CcmA involved in cell shape determination;gbkey=CDS;locus_tag=HP17_04316;product=Hypothetical protein;protein_id=EIE28297.1;transl_table=11 AIHX01000144.1 Genbank gene 15934 16869 . - . ID=gene-HP17_04321;Name=HP17_04321;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04321 AIHX01000144.1 Genbank CDS 15934 16869 . - 0 ID=cds-EIE28298.1;Parent=gene-HP17_04321;Dbxref=NCBI_GP:EIE28298.1;Name=EIE28298.1;Note=COG0739 Membrane proteins related to metalloendopeptidases;gbkey=CDS;locus_tag=HP17_04321;product=membrane-bound metallopeptidase;protein_id=EIE28298.1;transl_table=11 AIHX01000144.1 Genbank gene 16878 17804 . - . ID=gene-HP17_04326;Name=HP17_04326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04326 AIHX01000144.1 Genbank CDS 16878 17804 . - 0 ID=cds-EIE28299.1;Parent=gene-HP17_04326;Dbxref=NCBI_GP:EIE28299.1;Name=EIE28299.1;Note=COG0739 Membrane proteins related to metalloendopeptidases;gbkey=CDS;locus_tag=HP17_04326;product=Hypothetical protein;protein_id=EIE28299.1;transl_table=11 AIHX01000144.1 Genbank gene 17804 18973 . - . ID=gene-HP17_04331;Name=HP17_04331;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04331 AIHX01000144.1 Genbank CDS 17804 18973 . - 0 ID=cds-EIE28300.1;Parent=gene-HP17_04331;Dbxref=NCBI_GP:EIE28300.1;Name=EIE28300.1;Note=COG0285 Folylpolyglutamate synthase;gbkey=CDS;locus_tag=HP17_04331;product=folylpolyglutamate synthase;protein_id=EIE28300.1;transl_table=11 AIHX01000144.1 Genbank gene 18963 19475 . - . ID=gene-HP17_04336;Name=HP17_04336;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04336 AIHX01000144.1 Genbank CDS 18963 19475 . - 0 ID=cds-EIE28301.1;Parent=gene-HP17_04336;Dbxref=NCBI_GP:EIE28301.1;Name=EIE28301.1;gbkey=CDS;locus_tag=HP17_04336;product=Hypothetical protein;protein_id=EIE28301.1;transl_table=11 AIHX01000144.1 Genbank gene 19472 21892 . - . ID=gene-HP17_04341;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HP17_04341 AIHX01000144.1 Genbank CDS 19472 21892 . - 0 ID=cds-EIE28302.1;Parent=gene-HP17_04341;Dbxref=NCBI_GP:EIE28302.1;Name=EIE28302.1;Note=COG0495 Leucyl-tRNA synthetase;gbkey=CDS;gene=leuS;locus_tag=HP17_04341;product=leucyl-tRNA synthetase;protein_id=EIE28302.1;transl_table=11 AIHX01000144.1 Genbank gene 21903 22241 . - . ID=gene-HP17_04346;Name=HP17_04346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04346 AIHX01000144.1 Genbank CDS 21903 22241 . - 0 ID=cds-EIE28303.1;Parent=gene-HP17_04346;Dbxref=NCBI_GP:EIE28303.1;Name=EIE28303.1;gbkey=CDS;locus_tag=HP17_04346;product=integral membrane protein;protein_id=EIE28303.1;transl_table=11 AIHX01000144.1 Genbank gene 22251 23222 . - . ID=gene-HP17_04351;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=HP17_04351 AIHX01000144.1 Genbank CDS 22251 23222 . - 0 ID=cds-EIE28304.1;Parent=gene-HP17_04351;Dbxref=NCBI_GP:EIE28304.1;Name=EIE28304.1;Note=COG0341 Preprotein translocase subunit SecF;gbkey=CDS;gene=secF;locus_tag=HP17_04351;product=preprotein translocase subunit SecF;protein_id=EIE28304.1;transl_table=11 AIHX01000144.1 Genbank gene 23231 23590 . - . ID=gene-HP17_04356;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=HP17_04356 AIHX01000144.1 Genbank CDS 23231 23590 . - 0 ID=cds-EIE28305.1;Parent=gene-HP17_04356;Dbxref=NCBI_GP:EIE28305.1;Name=EIE28305.1;Note=COG0342 Preprotein translocase subunit SecD;gbkey=CDS;gene=secD;locus_tag=HP17_04356;product=preprotein translocase subunit SecD;protein_id=EIE28305.1;transl_table=11 ##sequence-region AIHX01000145.1 1 29536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000145.1 Genbank region 1 29536 . + . ID=AIHX01000145.1:1..29536;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000145.1 Genbank pseudogene 1 1177 . - . ID=gene-HP17_04361;Name=HP17_04361;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_04361;pseudo=true AIHX01000145.1 Genbank sequence_feature 1 1177 . - . ID=id-HP17_04361;Note=potential frameshift: common BLAST hit: gi|108563924|ref|YP_628240.1| preprotein translocase subunit SecD;gbkey=misc_feature;locus_tag=HP17_04361;pseudo=true AIHX01000145.1 Genbank gene 1174 1557 . - . ID=gene-HP17_04371;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=HP17_04371 AIHX01000145.1 Genbank CDS 1174 1557 . - 0 ID=cds-EIE28243.1;Parent=gene-HP17_04371;Dbxref=NCBI_GP:EIE28243.1;Name=EIE28243.1;Note=COG1862 Preprotein translocase subunit YajC;gbkey=CDS;gene=yajC;locus_tag=HP17_04371;product=preprotein translocase subunit YajC;protein_id=EIE28243.1;transl_table=11 AIHX01000145.1 Genbank gene 1605 2921 . - . ID=gene-HP17_04376;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=HP17_04376 AIHX01000145.1 Genbank CDS 1605 2921 . - 0 ID=cds-EIE28244.1;Parent=gene-HP17_04376;Dbxref=NCBI_GP:EIE28244.1;Name=EIE28244.1;Note=COG3004 Na+/H+ antiporter;gbkey=CDS;gene=nhaA;locus_tag=HP17_04376;product=pH-dependent sodium/proton antiporter;protein_id=EIE28244.1;transl_table=11 AIHX01000145.1 Genbank gene 2945 5824 . - . ID=gene-HP17_04381;Name=HP17_04381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04381 AIHX01000145.1 Genbank CDS 2945 5824 . - 0 ID=cds-EIE28245.1;Parent=gene-HP17_04381;Dbxref=NCBI_GP:EIE28245.1;Name=EIE28245.1;Note=COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains);gbkey=CDS;locus_tag=HP17_04381;product=putative recombination protein RecB;protein_id=EIE28245.1;transl_table=11 AIHX01000145.1 Genbank gene 6075 6869 . + . ID=gene-HP17_04386;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=HP17_04386 AIHX01000145.1 Genbank CDS 6075 6869 . + 0 ID=cds-EIE28246.1;Parent=gene-HP17_04386;Dbxref=NCBI_GP:EIE28246.1;Name=EIE28246.1;Note=COG0052 Ribosomal protein S2;gbkey=CDS;gene=rpsB;locus_tag=HP17_04386;product=30S ribosomal protein S2;protein_id=EIE28246.1;transl_table=11 AIHX01000145.1 Genbank gene 6869 7936 . + . ID=gene-HP17_04391;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=HP17_04391 AIHX01000145.1 Genbank CDS 6869 7936 . + 0 ID=cds-EIE28247.1;Parent=gene-HP17_04391;Dbxref=NCBI_GP:EIE28247.1;Name=EIE28247.1;Note=COG0264 Translation elongation factor Ts;gbkey=CDS;gene=tsf;locus_tag=HP17_04391;product=elongation factor Ts;protein_id=EIE28247.1;transl_table=11 AIHX01000145.1 Genbank gene 8380 10227 . - . ID=gene-HP17_04396;Name=HP17_04396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04396 AIHX01000145.1 Genbank CDS 8380 10227 . - 0 ID=cds-EIE28248.1;Parent=gene-HP17_04396;Dbxref=NCBI_GP:EIE28248.1;Name=EIE28248.1;Note=COG0768 Cell division protein FtsI/penicillin-binding protein 2;gbkey=CDS;locus_tag=HP17_04396;product=cell division protein;protein_id=EIE28248.1;transl_table=11 AIHX01000145.1 Genbank gene 10383 10712 . - . ID=gene-HP17_04401;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=HP17_04401 AIHX01000145.1 Genbank CDS 10383 10712 . - 0 ID=cds-EIE28249.1;Parent=gene-HP17_04401;Dbxref=NCBI_GP:EIE28249.1;Name=EIE28249.1;Note=COG1677 Flagellar hook-basal body protein;gbkey=CDS;gene=fliE;locus_tag=HP17_04401;product=flagellar hook-basal body protein FliE;protein_id=EIE28249.1;transl_table=11 AIHX01000145.1 Genbank gene 10840 11325 . - . ID=gene-HP17_04406;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=HP17_04406 AIHX01000145.1 Genbank CDS 10840 11325 . - 0 ID=cds-EIE28250.1;Parent=gene-HP17_04406;Dbxref=NCBI_GP:EIE28250.1;Name=EIE28250.1;Note=COG1558 Flagellar basal body rod protein;gbkey=CDS;gene=flgC;locus_tag=HP17_04406;product=flagellar basal body rod protein FlgC;protein_id=EIE28250.1;transl_table=11 AIHX01000145.1 Genbank gene 11338 11760 . - . ID=gene-HP17_04411;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=HP17_04411 AIHX01000145.1 Genbank CDS 11338 11760 . - 0 ID=cds-EIE28251.1;Parent=gene-HP17_04411;Dbxref=NCBI_GP:EIE28251.1;Name=EIE28251.1;Note=COG1815 Flagellar basal body protein;gbkey=CDS;gene=flgB;locus_tag=HP17_04411;product=flagellar basal body rod protein FlgB;protein_id=EIE28251.1;transl_table=11 AIHX01000145.1 Genbank gene 11964 13130 . + . ID=gene-HP17_04416;Name=HP17_04416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04416 AIHX01000145.1 Genbank CDS 11964 13130 . + 0 ID=cds-EIE28252.1;Parent=gene-HP17_04416;Dbxref=NCBI_GP:EIE28252.1;Name=EIE28252.1;Note=COG0772 Bacterial cell division membrane protein;gbkey=CDS;locus_tag=HP17_04416;product=cell division protein FtsW;protein_id=EIE28252.1;transl_table=11 AIHX01000145.1 Genbank gene 13154 14161 . - . ID=gene-HP17_04421;Name=HP17_04421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04421 AIHX01000145.1 Genbank CDS 13154 14161 . - 0 ID=cds-EIE28253.1;Parent=gene-HP17_04421;Dbxref=NCBI_GP:EIE28253.1;Name=EIE28253.1;Note=COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component;gbkey=CDS;locus_tag=HP17_04421;product=iron(III) ABC transporter periplasmic iron-binding protein (ceuE);protein_id=EIE28253.1;transl_table=11 AIHX01000145.1 Genbank gene 14362 15363 . - . ID=gene-HP17_04426;Name=HP17_04426;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04426 AIHX01000145.1 Genbank CDS 14362 15363 . - 0 ID=cds-EIE28254.1;Parent=gene-HP17_04426;Dbxref=NCBI_GP:EIE28254.1;Name=EIE28254.1;Note=COG0614 ABC-type Fe3+-hydroxamate transport system%2C periplasmic component;gbkey=CDS;locus_tag=HP17_04426;product=iron(III) ABC transporter periplasmic iron-binding protein;protein_id=EIE28254.1;transl_table=11 AIHX01000145.1 Genbank gene 15602 16198 . + . ID=gene-HP17_04431;Name=HP17_04431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04431 AIHX01000145.1 Genbank CDS 15602 16198 . + 0 ID=cds-EIE28255.1;Parent=gene-HP17_04431;Dbxref=NCBI_GP:EIE28255.1;Name=EIE28255.1;Note=COG0450 Peroxiredoxin;gbkey=CDS;locus_tag=HP17_04431;product=alkyl hydroperoxide reductase;protein_id=EIE28255.1;transl_table=11 AIHX01000145.1 Genbank gene 16346 17161 . + . ID=gene-HP17_04436;Name=HP17_04436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04436 AIHX01000145.1 Genbank CDS 16346 17161 . + 0 ID=cds-EIE28256.1;Parent=gene-HP17_04436;Dbxref=NCBI_GP:EIE28256.1;Name=EIE28256.1;Note=COG1464 ABC-type metal ion transport system%2C periplasmic component/surface antigen;gbkey=CDS;locus_tag=HP17_04436;product=outer membrane protein;protein_id=EIE28256.1;transl_table=11 AIHX01000145.1 Genbank gene 17651 19417 . - . ID=gene-HP17_04441;Name=HP17_04441;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04441 AIHX01000145.1 Genbank CDS 17651 19417 . - 0 ID=cds-EIE28257.1;Parent=gene-HP17_04441;Dbxref=NCBI_GP:EIE28257.1;Name=EIE28257.1;Note=COG0768 Cell division protein FtsI/penicillin-binding protein 2;gbkey=CDS;locus_tag=HP17_04441;product=penicillin-binding protein 2;protein_id=EIE28257.1;transl_table=11 AIHX01000145.1 Genbank gene 19398 19841 . - . ID=gene-HP17_04446;Name=HP17_04446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04446 AIHX01000145.1 Genbank CDS 19398 19841 . - 0 ID=cds-EIE28258.1;Parent=gene-HP17_04446;Dbxref=NCBI_GP:EIE28258.1;Name=EIE28258.1;gbkey=CDS;locus_tag=HP17_04446;product=Hypothetical protein;protein_id=EIE28258.1;transl_table=11 AIHX01000145.1 Genbank gene 19854 20480 . - . ID=gene-HP17_04451;Name=engB;gbkey=Gene;gene=engB;gene_biotype=protein_coding;locus_tag=HP17_04451 AIHX01000145.1 Genbank CDS 19854 20480 . - 0 ID=cds-EIE28259.1;Parent=gene-HP17_04451;Dbxref=NCBI_GP:EIE28259.1;Name=EIE28259.1;Note=COG0218 Predicted GTPase;gbkey=CDS;gene=engB;locus_tag=HP17_04451;product=GTP-binding protein YsxC;protein_id=EIE28259.1;transl_table=11 AIHX01000145.1 Genbank gene 20477 21034 . - . ID=gene-HP17_04456;Name=HP17_04456;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04456 AIHX01000145.1 Genbank CDS 20477 21034 . - 0 ID=cds-EIE28260.1;Parent=gene-HP17_04456;Dbxref=NCBI_GP:EIE28260.1;Name=EIE28260.1;Note=COG1934 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_04456;product=Hypothetical protein;protein_id=EIE28260.1;transl_table=11 AIHX01000145.1 Genbank gene 21034 21627 . - . ID=gene-HP17_04461;Name=HP17_04461;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04461 AIHX01000145.1 Genbank CDS 21034 21627 . - 0 ID=cds-EIE28261.1;Parent=gene-HP17_04461;Dbxref=NCBI_GP:EIE28261.1;Name=EIE28261.1;gbkey=CDS;locus_tag=HP17_04461;product=Hypothetical protein;protein_id=EIE28261.1;transl_table=11 AIHX01000145.1 Genbank gene 21602 22096 . - . ID=gene-HP17_04466;Name=HP17_04466;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04466 AIHX01000145.1 Genbank CDS 21602 22096 . - 0 ID=cds-EIE28262.1;Parent=gene-HP17_04466;Dbxref=NCBI_GP:EIE28262.1;Name=EIE28262.1;Note=COG1778 Low specificity phosphatase (HAD superfamily);gbkey=CDS;locus_tag=HP17_04466;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase);protein_id=EIE28262.1;transl_table=11 AIHX01000145.1 Genbank gene 22093 23040 . - . ID=gene-HP17_04471;Name=HP17_04471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04471 AIHX01000145.1 Genbank CDS 22093 23040 . - 0 ID=cds-EIE28263.1;Parent=gene-HP17_04471;Dbxref=NCBI_GP:EIE28263.1;Name=EIE28263.1;Note=COG0797 Lipoproteins;gbkey=CDS;locus_tag=HP17_04471;product=rare lipoprotein A;protein_id=EIE28263.1;transl_table=11 AIHX01000145.1 Genbank gene 23040 24152 . - . ID=gene-HP17_04476;Name=HP17_04476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04476 AIHX01000145.1 Genbank CDS 23040 24152 . - 0 ID=cds-EIE28264.1;Parent=gene-HP17_04476;Dbxref=NCBI_GP:EIE28264.1;Name=EIE28264.1;Note=COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains);gbkey=CDS;locus_tag=HP17_04476;product=regulatory protein DniR;protein_id=EIE28264.1;transl_table=11 AIHX01000145.1 Genbank gene 24246 25010 . - . ID=gene-HP17_04481;Name=HP17_04481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04481 AIHX01000145.1 Genbank CDS 24246 25010 . - 0 ID=cds-EIE28265.1;Parent=gene-HP17_04481;Dbxref=NCBI_GP:EIE28265.1;Name=EIE28265.1;Note=COG0084 Mg-dependent DNase;gbkey=CDS;locus_tag=HP17_04481;product=DNAse;protein_id=EIE28265.1;transl_table=11 AIHX01000145.1 Genbank gene 25085 25705 . + . ID=gene-HP17_04486;Name=HP17_04486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04486 AIHX01000145.1 Genbank CDS 25085 25705 . + 0 ID=cds-EIE28266.1;Parent=gene-HP17_04486;Dbxref=NCBI_GP:EIE28266.1;Name=EIE28266.1;Note=COG0307 Riboflavin synthase alpha chain;gbkey=CDS;locus_tag=HP17_04486;product=riboflavin synthase subunit alpha;protein_id=EIE28266.1;transl_table=11 AIHX01000145.1 Genbank gene 25706 25978 . + . ID=gene-HP17_04491;Name=HP17_04491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04491 AIHX01000145.1 Genbank CDS 25706 25978 . + 0 ID=cds-EIE28267.1;Parent=gene-HP17_04491;Dbxref=NCBI_GP:EIE28267.1;Name=EIE28267.1;Note=COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB;gbkey=CDS;locus_tag=HP17_04491;product=Hypothetical protein;protein_id=EIE28267.1;transl_table=11 AIHX01000145.1 Genbank gene 26000 26983 . + . ID=gene-HP17_04496;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=HP17_04496 AIHX01000145.1 Genbank CDS 26000 26983 . + 0 ID=cds-EIE28268.1;Parent=gene-HP17_04496;Dbxref=NCBI_GP:EIE28268.1;Name=EIE28268.1;Note=COG1135 ABC-type metal ion transport system%2C ATPase component;gbkey=CDS;gene=metN;locus_tag=HP17_04496;product=DL-methionine transporter ATP-binding subunit;protein_id=EIE28268.1;transl_table=11 AIHX01000145.1 Genbank gene 26985 27632 . + . ID=gene-HP17_04501;Name=HP17_04501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04501 AIHX01000145.1 Genbank CDS 26985 27632 . + 0 ID=cds-EIE28269.1;Parent=gene-HP17_04501;Dbxref=NCBI_GP:EIE28269.1;Name=EIE28269.1;Note=COG2011 ABC-type metal ion transport system%2C permease component;gbkey=CDS;locus_tag=HP17_04501;product=ABC-type transport system%2C permease;protein_id=EIE28269.1;transl_table=11 AIHX01000145.1 Genbank gene 27664 28782 . - . ID=gene-HP17_04506;Name=HP17_04506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04506 AIHX01000145.1 Genbank CDS 27664 28782 . - 0 ID=cds-EIE28270.1;Parent=gene-HP17_04506;Dbxref=NCBI_GP:EIE28270.1;Name=EIE28270.1;Note=COG1442 Lipopolysaccharide biosynthesis proteins%2C LPS:glycosyltransferases;gbkey=CDS;locus_tag=HP17_04506;product=putative lipopolysaccharide biosynthesis protein;protein_id=EIE28270.1;transl_table=11 AIHX01000145.1 Genbank gene 28831 29259 . - . ID=gene-HP17_04511;Name=HP17_04511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04511 AIHX01000145.1 Genbank CDS 28831 29259 . - 0 ID=cds-EIE28271.1;Parent=gene-HP17_04511;Dbxref=NCBI_GP:EIE28271.1;Name=EIE28271.1;gbkey=CDS;locus_tag=HP17_04511;product=Hypothetical protein;protein_id=EIE28271.1;transl_table=11 AIHX01000145.1 Genbank gene 29269 29536 . - . ID=gene-HP17_04516;Name=HP17_04516;end_range=29536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04516;partial=true AIHX01000145.1 Genbank CDS 29269 29536 . - 1 ID=cds-EIE28272.1;Parent=gene-HP17_04516;Dbxref=NCBI_GP:EIE28272.1;Name=EIE28272.1;Note=COG0671 Membrane-associated phospholipid phosphatase;end_range=29536,.;gbkey=CDS;locus_tag=HP17_04516;partial=true;product=Hypothetical protein;protein_id=EIE28272.1;transl_table=11 ##sequence-region AIHX01000146.1 1 16509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000146.1 Genbank region 1 16509 . + . ID=AIHX01000146.1:1..16509;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000146.1 Genbank gene 1 305 . - . ID=gene-HP17_04521;Name=HP17_04521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04521;partial=true;start_range=.,1 AIHX01000146.1 Genbank CDS 1 305 . - 0 ID=cds-EIE28205.1;Parent=gene-HP17_04521;Dbxref=NCBI_GP:EIE28205.1;Name=EIE28205.1;gbkey=CDS;locus_tag=HP17_04521;partial=true;product=Hypothetical protein;protein_id=EIE28205.1;start_range=.,1;transl_table=11 AIHX01000146.1 Genbank pseudogene 302 1239 . - . ID=gene-HP17_04526;Name=HP17_04526;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_04526;pseudo=true AIHX01000146.1 Genbank sequence_feature 302 1239 . - . ID=id-HP17_04526;Note=potential frameshift: common BLAST hit: gi|308183736|ref|YP_003927863.1| undecaprenyl phosphate N-acetylglucosaminyltransferase;gbkey=misc_feature;locus_tag=HP17_04526;pseudo=true AIHX01000146.1 Genbank gene 1446 2234 . + . ID=gene-HP17_04536;Name=HP17_04536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04536 AIHX01000146.1 Genbank CDS 1446 2234 . + 0 ID=cds-EIE28206.1;Parent=gene-HP17_04536;Dbxref=NCBI_GP:EIE28206.1;Name=EIE28206.1;Note=COG0854 Pyridoxal phosphate biosynthesis protein;gbkey=CDS;locus_tag=HP17_04536;product=pyridoxine 5'-phosphate synthase;protein_id=EIE28206.1;transl_table=11 AIHX01000146.1 Genbank gene 2236 3159 . + . ID=gene-HP17_04541;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=HP17_04541 AIHX01000146.1 Genbank CDS 2236 3159 . + 0 ID=cds-EIE28207.1;Parent=gene-HP17_04541;Dbxref=NCBI_GP:EIE28207.1;Name=EIE28207.1;Note=COG1995 Pyridoxal phosphate biosynthesis protein;gbkey=CDS;gene=pdxA;locus_tag=HP17_04541;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=EIE28207.1;transl_table=11 AIHX01000146.1 Genbank gene 3224 4246 . + . ID=gene-HP17_04546;Name=HP17_04546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04546 AIHX01000146.1 Genbank CDS 3224 4246 . + 0 ID=cds-EIE28208.1;Parent=gene-HP17_04546;Dbxref=NCBI_GP:EIE28208.1;Name=EIE28208.1;Note=COG0533 Metal-dependent proteases with possible chaperone activity;gbkey=CDS;locus_tag=HP17_04546;product=UGMP family protein;protein_id=EIE28208.1;transl_table=11 AIHX01000146.1 Genbank gene 4938 5033 . + . ID=gene-HP17_04551;Name=HP17_04551;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04551 AIHX01000146.1 Genbank CDS 4938 5033 . + 0 ID=cds-EIE28209.1;Parent=gene-HP17_04551;Dbxref=NCBI_GP:EIE28209.1;Name=EIE28209.1;gbkey=CDS;locus_tag=HP17_04551;product=Hypothetical protein;protein_id=EIE28209.1;transl_table=11 AIHX01000146.1 Genbank gene 5087 5875 . + . ID=gene-HP17_04556;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=HP17_04556 AIHX01000146.1 Genbank CDS 5087 5875 . + 0 ID=cds-EIE28210.1;Parent=gene-HP17_04556;Dbxref=NCBI_GP:EIE28210.1;Name=EIE28210.1;Note=COG4786 Flagellar basal body rod protein;gbkey=CDS;gene=flgG;locus_tag=HP17_04556;product=flagellar basal body rod protein FlgG;protein_id=EIE28210.1;transl_table=11 AIHX01000146.1 Genbank gene 5972 6250 . - . ID=gene-HP17_04561;Name=HP17_04561;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04561 AIHX01000146.1 Genbank CDS 5972 6250 . - 0 ID=cds-EIE28211.1;Parent=gene-HP17_04561;Dbxref=NCBI_GP:EIE28211.1;Name=EIE28211.1;gbkey=CDS;locus_tag=HP17_04561;product=Hypothetical protein;protein_id=EIE28211.1;transl_table=11 AIHX01000146.1 Genbank pseudogene 7248 7390 . - . ID=gene-HP17_04576;Name=HP17_04576;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_04576;pseudo=true AIHX01000146.1 Genbank sequence_feature 7248 7390 . - . ID=id-HP17_04576;Note=potential frameshift: common BLAST hit: gb|ACD49035.1|ref|YP_001911065.1| Hypothetical protein;gbkey=misc_feature;locus_tag=HP17_04576;pseudo=true AIHX01000146.1 Genbank gene 7475 8236 . - . ID=gene-HP17_04581;Name=HP17_04581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04581 AIHX01000146.1 Genbank CDS 7475 8236 . - 0 ID=cds-EIE28212.1;Parent=gene-HP17_04581;Dbxref=NCBI_GP:EIE28212.1;Name=EIE28212.1;Note=COG4735 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_04581;product=Hypothetical protein;protein_id=EIE28212.1;transl_table=11 AIHX01000146.1 Genbank gene 8497 9048 . - . ID=gene-HP17_04586;Name=HP17_04586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04586 AIHX01000146.1 Genbank CDS 8497 9048 . - 0 ID=cds-EIE28213.1;Parent=gene-HP17_04586;Dbxref=NCBI_GP:EIE28213.1;Name=EIE28213.1;Note=COG4735 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_04586;product=Hypothetical protein;protein_id=EIE28213.1;transl_table=11 AIHX01000146.1 Genbank gene 9049 9267 . - . ID=gene-HP17_04591;Name=HP17_04591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04591 AIHX01000146.1 Genbank CDS 9049 9267 . - 0 ID=cds-EIE28214.1;Parent=gene-HP17_04591;Dbxref=NCBI_GP:EIE28214.1;Name=EIE28214.1;Note=COG4735 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_04591;product=Hypothetical protein;protein_id=EIE28214.1;transl_table=11 AIHX01000146.1 Genbank gene 9369 9785 . - . ID=gene-HP17_04596;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=HP17_04596 AIHX01000146.1 Genbank CDS 9369 9785 . - 0 ID=cds-EIE28215.1;Parent=gene-HP17_04596;Dbxref=NCBI_GP:EIE28215.1;Name=EIE28215.1;Note=COG0781 Transcription termination factor;gbkey=CDS;gene=nusB;locus_tag=HP17_04596;product=transcription antitermination protein NusB;protein_id=EIE28215.1;transl_table=11 AIHX01000146.1 Genbank gene 9787 10257 . - . ID=gene-HP17_04601;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=HP17_04601 AIHX01000146.1 Genbank CDS 9787 10257 . - 0 ID=cds-EIE28216.1;Parent=gene-HP17_04601;Dbxref=NCBI_GP:EIE28216.1;Name=EIE28216.1;Note=COG0054 Riboflavin synthase beta-chain;gbkey=CDS;gene=ribH;locus_tag=HP17_04601;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=EIE28216.1;transl_table=11 AIHX01000146.1 Genbank gene 10267 11097 . - . ID=gene-HP17_04606;Name=HP17_04606;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04606 AIHX01000146.1 Genbank CDS 10267 11097 . - 0 ID=cds-EIE28217.1;Parent=gene-HP17_04606;Dbxref=NCBI_GP:EIE28217.1;Name=EIE28217.1;Note=COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase;gbkey=CDS;locus_tag=HP17_04606;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=EIE28217.1;transl_table=11 AIHX01000146.1 Genbank gene 11084 11749 . - . ID=gene-HP17_04611;Name=HP17_04611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04611 AIHX01000146.1 Genbank CDS 11084 11749 . - 0 ID=cds-EIE28218.1;Parent=gene-HP17_04611;Dbxref=NCBI_GP:EIE28218.1;Name=EIE28218.1;Note=COG0288 Carbonic anhydrase;gbkey=CDS;locus_tag=HP17_04611;product=carbonic anhydrase;protein_id=EIE28218.1;transl_table=11 AIHX01000146.1 Genbank gene 11871 12554 . + . ID=gene-HP17_04616;Name=HP17_04616;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04616 AIHX01000146.1 Genbank CDS 11871 12554 . + 0 ID=cds-EIE28219.1;Parent=gene-HP17_04616;Dbxref=NCBI_GP:EIE28219.1;Name=EIE28219.1;Note=COG0284 Orotidine-5'-phosphate decarboxylase;gbkey=CDS;locus_tag=HP17_04616;product=orotidine 5'-phosphate decarboxylase;protein_id=EIE28219.1;transl_table=11 AIHX01000146.1 Genbank gene 12555 13385 . + . ID=gene-HP17_04621;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=HP17_04621 AIHX01000146.1 Genbank CDS 12555 13385 . + 0 ID=cds-EIE28220.1;Parent=gene-HP17_04621;Dbxref=NCBI_GP:EIE28220.1;Name=EIE28220.1;Note=COG0414 Panthothenate synthetase;gbkey=CDS;gene=panC;locus_tag=HP17_04621;product=pantoate--beta-alanine ligase;protein_id=EIE28220.1;transl_table=11 AIHX01000146.1 Genbank gene 13399 13474 . - . ID=gene-HP17_t04638;Name=HP17_t04638;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04638 AIHX01000146.1 Genbank tRNA 13399 13474 . - . ID=rna-HP17_t04638;Parent=gene-HP17_t04638;gbkey=tRNA;locus_tag=HP17_t04638;product=tRNA-Glu AIHX01000146.1 Genbank exon 13399 13474 . - . ID=exon-HP17_t04638-1;Parent=rna-HP17_t04638;gbkey=tRNA;locus_tag=HP17_t04638;product=tRNA-Glu AIHX01000146.1 Genbank gene 13537 13613 . - . ID=gene-HP17_t04640;Name=HP17_t04640;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04640 AIHX01000146.1 Genbank tRNA 13537 13613 . - . ID=rna-HP17_t04640;Parent=gene-HP17_t04640;gbkey=tRNA;locus_tag=HP17_t04640;product=tRNA-Asp AIHX01000146.1 Genbank exon 13537 13613 . - . ID=exon-HP17_t04640-1;Parent=rna-HP17_t04640;gbkey=tRNA;locus_tag=HP17_t04640;product=tRNA-Asp AIHX01000146.1 Genbank gene 13653 13728 . - . ID=gene-HP17_t04642;Name=HP17_t04642;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04642 AIHX01000146.1 Genbank tRNA 13653 13728 . - . ID=rna-HP17_t04642;Parent=gene-HP17_t04642;gbkey=tRNA;locus_tag=HP17_t04642;product=tRNA-Val AIHX01000146.1 Genbank exon 13653 13728 . - . ID=exon-HP17_t04642-1;Parent=rna-HP17_t04642;gbkey=tRNA;locus_tag=HP17_t04642;product=tRNA-Val AIHX01000146.1 Genbank gene 13770 13844 . - . ID=gene-HP17_t04644;Name=HP17_t04644;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04644 AIHX01000146.1 Genbank tRNA 13770 13844 . - . ID=rna-HP17_t04644;Parent=gene-HP17_t04644;gbkey=tRNA;locus_tag=HP17_t04644;product=tRNA-Glu AIHX01000146.1 Genbank exon 13770 13844 . - . ID=exon-HP17_t04644-1;Parent=rna-HP17_t04644;gbkey=tRNA;locus_tag=HP17_t04644;product=tRNA-Glu AIHX01000146.1 Genbank gene 13855 13930 . - . ID=gene-HP17_t04646;Name=HP17_t04646;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04646 AIHX01000146.1 Genbank tRNA 13855 13930 . - . ID=rna-HP17_t04646;Parent=gene-HP17_t04646;gbkey=tRNA;locus_tag=HP17_t04646;product=tRNA-Lys AIHX01000146.1 Genbank exon 13855 13930 . - . ID=exon-HP17_t04646-1;Parent=rna-HP17_t04646;gbkey=tRNA;locus_tag=HP17_t04646;product=tRNA-Lys AIHX01000146.1 Genbank gene 14097 14237 . + . ID=gene-HP17_04626;Name=HP17_04626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04626 AIHX01000146.1 Genbank CDS 14097 14237 . + 0 ID=cds-EIE28221.1;Parent=gene-HP17_04626;Dbxref=NCBI_GP:EIE28221.1;Name=EIE28221.1;Note=not present in J99;gbkey=CDS;locus_tag=HP17_04626;product=Hypothetical protein;protein_id=EIE28221.1;transl_table=11 AIHX01000146.1 Genbank gene 14413 16299 . - . ID=gene-HP17_04631;Name=HP17_04631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04631 AIHX01000146.1 Genbank CDS 14413 16299 . - 0 ID=cds-EIE28222.1;Parent=gene-HP17_04631;Dbxref=NCBI_GP:EIE28222.1;Name=EIE28222.1;gbkey=CDS;locus_tag=HP17_04631;product=outer membrane protein;protein_id=EIE28222.1;transl_table=11 ##sequence-region AIHX01000147.1 1 18219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000147.1 Genbank region 1 18219 . + . ID=AIHX01000147.1:1..18219;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000147.1 Genbank gene 222 1862 . - . ID=gene-HP17_04646;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=HP17_04646 AIHX01000147.1 Genbank CDS 222 1862 . - 0 ID=cds-EIE28183.1;Parent=gene-HP17_04646;Dbxref=NCBI_GP:EIE28183.1;Name=EIE28183.1;Note=COG0459 Chaperonin GroEL (HSP60 family);gbkey=CDS;gene=groEL;locus_tag=HP17_04646;product=chaperonin GroEL;protein_id=EIE28183.1;transl_table=11 AIHX01000147.1 Genbank gene 1888 2244 . - . ID=gene-HP17_04651;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=HP17_04651 AIHX01000147.1 Genbank CDS 1888 2244 . - 0 ID=cds-EIE28184.1;Parent=gene-HP17_04651;Dbxref=NCBI_GP:EIE28184.1;Name=EIE28184.1;Note=COG0234 Co-chaperonin GroES (HSP10);gbkey=CDS;gene=groES;locus_tag=HP17_04651;product=co-chaperonin GroES;protein_id=EIE28184.1;transl_table=11 AIHX01000147.1 Genbank gene 2530 4209 . + . ID=gene-HP17_04656;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=HP17_04656 AIHX01000147.1 Genbank CDS 2530 4209 . + 0 ID=cds-EIE28185.1;Parent=gene-HP17_04656;Dbxref=NCBI_GP:EIE28185.1;Name=EIE28185.1;Note=COG0358 DNA primase (bacterial type);gbkey=CDS;gene=dnaG;locus_tag=HP17_04656;product=DNA primase;protein_id=EIE28185.1;transl_table=11 AIHX01000147.1 Genbank gene 4206 5258 . + . ID=gene-HP17_04661;Name=HP17_04661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04661 AIHX01000147.1 Genbank CDS 4206 5258 . + 0 ID=cds-EIE28186.1;Parent=gene-HP17_04661;Dbxref=NCBI_GP:EIE28186.1;Name=EIE28186.1;Note=COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase%2C contains the PP-loop ATPase domain;gbkey=CDS;locus_tag=HP17_04661;product=Hypothetical protein;protein_id=EIE28186.1;transl_table=11 AIHX01000147.1 Genbank gene 5348 6175 . + . ID=gene-HP17_04666;Name=HP17_04666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04666 AIHX01000147.1 Genbank CDS 5348 6175 . + 0 ID=cds-EIE28187.1;Parent=gene-HP17_04666;Dbxref=NCBI_GP:EIE28187.1;Name=EIE28187.1;gbkey=CDS;locus_tag=HP17_04666;product=Hypothetical protein;protein_id=EIE28187.1;transl_table=11 AIHX01000147.1 Genbank gene 6321 6602 . + . ID=gene-HP17_04671;Name=HP17_04671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04671 AIHX01000147.1 Genbank CDS 6321 6602 . + 0 ID=cds-EIE28188.1;Parent=gene-HP17_04671;Dbxref=NCBI_GP:EIE28188.1;Name=EIE28188.1;gbkey=CDS;locus_tag=HP17_04671;product=Hypothetical protein;protein_id=EIE28188.1;transl_table=11 AIHX01000147.1 Genbank gene 6602 6865 . + . ID=gene-HP17_04676;Name=HP17_04676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04676 AIHX01000147.1 Genbank CDS 6602 6865 . + 0 ID=cds-EIE28189.1;Parent=gene-HP17_04676;Dbxref=NCBI_GP:EIE28189.1;Name=EIE28189.1;gbkey=CDS;locus_tag=HP17_04676;product=Hypothetical protein;protein_id=EIE28189.1;transl_table=11 AIHX01000147.1 Genbank gene 6867 9230 . + . ID=gene-HP17_04681;Name=HP17_04681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04681 AIHX01000147.1 Genbank CDS 6867 9230 . + 0 ID=cds-EIE28190.1;Parent=gene-HP17_04681;Dbxref=NCBI_GP:EIE28190.1;Name=EIE28190.1;Note=COG3451 Type IV secretory pathway%2C VirB4 components;gbkey=CDS;locus_tag=HP17_04681;product=ATPase/DNA transfer protein;protein_id=EIE28190.1;transl_table=11 AIHX01000147.1 Genbank gene 9537 10877 . + . ID=gene-HP17_04686;Name=HP17_04686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04686 AIHX01000147.1 Genbank CDS 9537 10877 . + 0 ID=cds-EIE28191.1;Parent=gene-HP17_04686;Dbxref=NCBI_GP:EIE28191.1;Name=EIE28191.1;Note=COG3014 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_04686;product=Hypothetical protein;protein_id=EIE28191.1;transl_table=11 AIHX01000147.1 Genbank gene 10985 11950 . + . ID=gene-HP17_04691;Name=HP17_04691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04691 AIHX01000147.1 Genbank CDS 10985 11950 . + 0 ID=cds-EIE28192.1;Parent=gene-HP17_04691;Dbxref=NCBI_GP:EIE28192.1;Name=EIE28192.1;Note=COG0835 Chemotaxis signal transduction protein;gbkey=CDS;locus_tag=HP17_04691;product=chemotaxis protein;protein_id=EIE28192.1;transl_table=11 AIHX01000147.1 Genbank gene 11947 13164 . + . ID=gene-HP17_04696;Name=HP17_04696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04696 AIHX01000147.1 Genbank CDS 11947 13164 . + 0 ID=cds-EIE28193.1;Parent=gene-HP17_04696;Dbxref=NCBI_GP:EIE28193.1;Name=EIE28193.1;Note=COG0019 Diaminopimelate decarboxylase;gbkey=CDS;locus_tag=HP17_04696;product=carboxynorspermidine decarboxylase;protein_id=EIE28193.1;transl_table=11 AIHX01000147.1 Genbank gene 13174 13746 . - . ID=gene-HP17_04701;Name=HP17_04701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04701 AIHX01000147.1 Genbank CDS 13174 13746 . - 0 ID=cds-EIE28194.1;Parent=gene-HP17_04701;Dbxref=NCBI_GP:EIE28194.1;Name=EIE28194.1;Note=COG0671 Membrane-associated phospholipid phosphatase;gbkey=CDS;locus_tag=HP17_04701;product=lipid A 1-phosphatase;protein_id=EIE28194.1;transl_table=11 AIHX01000147.1 Genbank gene 13756 15321 . - . ID=gene-HP17_04706;Name=HP17_04706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04706 AIHX01000147.1 Genbank CDS 13756 15321 . - 0 ID=cds-EIE28195.1;Parent=gene-HP17_04706;Dbxref=NCBI_GP:EIE28195.1;Name=EIE28195.1;Note=COG2194 Predicted membrane-associated%2C metal-dependent hydrolase;gbkey=CDS;locus_tag=HP17_04706;product=lipid A phosphoethanolamine transferase;protein_id=EIE28195.1;transl_table=11 AIHX01000147.1 Genbank gene 15653 15754 . + . ID=gene-HP17_04711;Name=HP17_04711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04711 AIHX01000147.1 Genbank CDS 15653 15754 . + 0 ID=cds-EIE28196.1;Parent=gene-HP17_04711;Dbxref=NCBI_GP:EIE28196.1;Name=EIE28196.1;gbkey=CDS;locus_tag=HP17_04711;product=Hypothetical protein;protein_id=EIE28196.1;transl_table=11 AIHX01000147.1 Genbank gene 15923 18219 . - . ID=gene-HP17_04716;Name=HP17_04716;end_range=18219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04716;partial=true AIHX01000147.1 Genbank CDS 15923 18219 . - 2 ID=cds-EIE28197.1;Parent=gene-HP17_04716;Dbxref=NCBI_GP:EIE28197.1;Name=EIE28197.1;end_range=18219,.;gbkey=CDS;locus_tag=HP17_04716;partial=true;product=outer membrane protein (omp2);protein_id=EIE28197.1;transl_table=11 ##sequence-region AIHX01000148.1 1 18693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000148.1 Genbank region 1 18693 . + . ID=AIHX01000148.1:1..18693;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000148.1 Genbank pseudogene 475 1756 . - . ID=gene-HP17_04721;Name=HP17_04721;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_04721;pseudo=true AIHX01000148.1 Genbank sequence_feature 475 1756 . - . ID=id-HP17_04721;Note=potential frameshift: common BLAST hit: gi|15644659|ref|NP_206828.1| type II citrate synthase;gbkey=misc_feature;locus_tag=HP17_04721;pseudo=true AIHX01000148.1 Genbank gene 1957 3234 . + . ID=gene-HP17_04731;Name=HP17_04731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04731 AIHX01000148.1 Genbank CDS 1957 3234 . + 0 ID=cds-EIE28163.1;Parent=gene-HP17_04731;Dbxref=NCBI_GP:EIE28163.1;Name=EIE28163.1;Note=COG0538 Isocitrate dehydrogenases;gbkey=CDS;locus_tag=HP17_04731;product=isocitrate dehydrogenase;protein_id=EIE28163.1;transl_table=11 AIHX01000148.1 Genbank gene 3301 3828 . + . ID=gene-HP17_04736;Name=HP17_04736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04736 AIHX01000148.1 Genbank CDS 3301 3828 . + 0 ID=cds-EIE28164.1;Parent=gene-HP17_04736;Dbxref=NCBI_GP:EIE28164.1;Name=EIE28164.1;gbkey=CDS;locus_tag=HP17_04736;product=Hypothetical protein;protein_id=EIE28164.1;transl_table=11 AIHX01000148.1 Genbank gene 3805 4461 . - . ID=gene-HP17_04741;Name=HP17_04741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04741 AIHX01000148.1 Genbank CDS 3805 4461 . - 0 ID=cds-EIE28165.1;Parent=gene-HP17_04741;Dbxref=NCBI_GP:EIE28165.1;Name=EIE28165.1;Note=COG0132 Dethiobiotin synthetase;gbkey=CDS;locus_tag=HP17_04741;product=dethiobiotin synthetase;protein_id=EIE28165.1;transl_table=11 AIHX01000148.1 Genbank gene 4465 6252 . - . ID=gene-HP17_04746;Name=HP17_04746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04746 AIHX01000148.1 Genbank CDS 4465 6252 . - 0 ID=cds-EIE28166.1;Parent=gene-HP17_04746;Dbxref=NCBI_GP:EIE28166.1;Name=EIE28166.1;gbkey=CDS;locus_tag=HP17_04746;product=Hypothetical protein;protein_id=EIE28166.1;transl_table=11 AIHX01000148.1 Genbank gene 6361 6774 . + . ID=gene-HP17_04751;Name=HP17_04751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04751 AIHX01000148.1 Genbank CDS 6361 6774 . + 0 ID=cds-EIE28167.1;Parent=gene-HP17_04751;Dbxref=NCBI_GP:EIE28167.1;Name=EIE28167.1;Note=COG0589 Universal stress protein UspA and related nucleotide-binding proteins;gbkey=CDS;locus_tag=HP17_04751;product=putative universal stress global response regulator UspA;protein_id=EIE28167.1;transl_table=11 AIHX01000148.1 Genbank gene 6805 7080 . + . ID=gene-HP17_04756;Name=HP17_04756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04756 AIHX01000148.1 Genbank CDS 6805 7080 . + 0 ID=cds-EIE28168.1;Parent=gene-HP17_04756;Dbxref=NCBI_GP:EIE28168.1;Name=EIE28168.1;Note=COG2127 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_04756;product=ATP-dependent Clp protease adapter protein ClpS;protein_id=EIE28168.1;transl_table=11 AIHX01000148.1 Genbank gene 7080 9305 . + . ID=gene-HP17_04761;Name=HP17_04761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04761 AIHX01000148.1 Genbank CDS 7080 9305 . + 0 ID=cds-EIE28169.1;Parent=gene-HP17_04761;Dbxref=NCBI_GP:EIE28169.1;Name=EIE28169.1;Note=COG0542 ATPases with chaperone activity%2C ATP-binding subunit;gbkey=CDS;locus_tag=HP17_04761;product=ATP-dependent C1p protease (clpA);protein_id=EIE28169.1;transl_table=11 AIHX01000148.1 Genbank gene 9295 9645 . + . ID=gene-HP17_04766;Name=HP17_04766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04766 AIHX01000148.1 Genbank CDS 9295 9645 . + 0 ID=cds-EIE28170.1;Parent=gene-HP17_04766;Dbxref=NCBI_GP:EIE28170.1;Name=EIE28170.1;Note=COG0853 Aspartate 1-decarboxylase;gbkey=CDS;locus_tag=HP17_04766;product=aspartate alpha-decarboxylase;protein_id=EIE28170.1;transl_table=11 AIHX01000148.1 Genbank gene 9656 9949 . + . ID=gene-HP17_04771;Name=HP17_04771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04771 AIHX01000148.1 Genbank CDS 9656 9949 . + 0 ID=cds-EIE28171.1;Parent=gene-HP17_04771;Dbxref=NCBI_GP:EIE28171.1;Name=EIE28171.1;Note=COG0718 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_04771;product=Hypothetical protein;protein_id=EIE28171.1;transl_table=11 AIHX01000148.1 Genbank gene 9949 10944 . + . ID=gene-HP17_04776;Name=HP17_04776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04776 AIHX01000148.1 Genbank CDS 9949 10944 . + 0 ID=cds-EIE28172.1;Parent=gene-HP17_04776;Dbxref=NCBI_GP:EIE28172.1;Name=EIE28172.1;gbkey=CDS;locus_tag=HP17_04776;product=Hypothetical protein;protein_id=EIE28172.1;transl_table=11 AIHX01000148.1 Genbank gene 10952 12007 . + . ID=gene-HP17_04781;Name=HP17_04781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04781 AIHX01000148.1 Genbank CDS 10952 12007 . + 0 ID=cds-EIE28173.1;Parent=gene-HP17_04781;Dbxref=NCBI_GP:EIE28173.1;Name=EIE28173.1;gbkey=CDS;locus_tag=HP17_04781;product=Hypothetical protein;protein_id=EIE28173.1;transl_table=11 AIHX01000148.1 Genbank gene 12023 12136 . + . ID=gene-HP17_04786;Name=HP17_04786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04786 AIHX01000148.1 Genbank CDS 12023 12136 . + 0 ID=cds-EIE28174.1;Parent=gene-HP17_04786;Dbxref=NCBI_GP:EIE28174.1;Name=EIE28174.1;gbkey=CDS;locus_tag=HP17_04786;product=Comb7 competence protein;protein_id=EIE28174.1;transl_table=11 AIHX01000148.1 Genbank gene 12133 12870 . + . ID=gene-HP17_04791;Name=HP17_04791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04791 AIHX01000148.1 Genbank CDS 12133 12870 . + 0 ID=cds-EIE28175.1;Parent=gene-HP17_04791;Dbxref=NCBI_GP:EIE28175.1;Name=EIE28175.1;Note=COG3736 Type IV secretory pathway%2C component VirB8;gbkey=CDS;locus_tag=HP17_04791;product=Hypothetical protein;protein_id=EIE28175.1;transl_table=11 AIHX01000148.1 Genbank gene 12870 13865 . + . ID=gene-HP17_04796;Name=HP17_04796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04796 AIHX01000148.1 Genbank CDS 12870 13865 . + 0 ID=cds-EIE28176.1;Parent=gene-HP17_04796;Dbxref=NCBI_GP:EIE28176.1;Name=EIE28176.1;Note=COG3504 Type IV secretory pathway%2C VirB9 components;gbkey=CDS;locus_tag=HP17_04796;product=comB9 competence protein;protein_id=EIE28176.1;transl_table=11 AIHX01000148.1 Genbank gene 13858 14988 . + . ID=gene-HP17_04801;Name=HP17_04801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04801 AIHX01000148.1 Genbank CDS 13858 14988 . + 0 ID=cds-EIE28177.1;Parent=gene-HP17_04801;Dbxref=NCBI_GP:EIE28177.1;Name=EIE28177.1;Note=COG2948 Type IV secretory pathway%2C VirB10 components;gbkey=CDS;locus_tag=HP17_04801;product=comB10 competence protein;protein_id=EIE28177.1;transl_table=11 AIHX01000148.1 Genbank gene 15058 16485 . + . ID=gene-HP17_04806;Name=HP17_04806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04806 AIHX01000148.1 Genbank CDS 15058 16485 . + 0 ID=cds-EIE28178.1;Parent=gene-HP17_04806;Dbxref=NCBI_GP:EIE28178.1;Name=EIE28178.1;Note=COG0836 Mannose-1-phosphate guanylyltransferase;gbkey=CDS;locus_tag=HP17_04806;product=mannose-1-phosphate guanyltransferase;protein_id=EIE28178.1;transl_table=11 AIHX01000148.1 Genbank gene 16485 17630 . + . ID=gene-HP17_04811;Name=HP17_04811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04811 AIHX01000148.1 Genbank CDS 16485 17630 . + 0 ID=cds-EIE28179.1;Parent=gene-HP17_04811;Dbxref=NCBI_GP:EIE28179.1;Name=EIE28179.1;Note=COG1089 GDP-D-mannose dehydratase;gbkey=CDS;locus_tag=HP17_04811;product=GDP-D-mannose dehydratase;protein_id=EIE28179.1;transl_table=11 AIHX01000148.1 Genbank gene 17623 18555 . + . ID=gene-HP17_04816;Name=HP17_04816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04816 AIHX01000148.1 Genbank CDS 17623 18555 . + 0 ID=cds-EIE28180.1;Parent=gene-HP17_04816;Dbxref=NCBI_GP:EIE28180.1;Name=EIE28180.1;Note=COG0451 Nucleoside-diphosphate-sugar epimerases;gbkey=CDS;locus_tag=HP17_04816;product=nodulation protein (nolK);protein_id=EIE28180.1;transl_table=11 ##sequence-region AIHX01000149.1 1 19305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000149.1 Genbank region 1 19305 . + . ID=AIHX01000149.1:1..19305;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000149.1 Genbank gene 1 1266 . + . ID=gene-HP17_04821;Name=HP17_04821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04821;partial=true;start_range=.,1 AIHX01000149.1 Genbank CDS 1 1266 . + 0 ID=cds-EIE28133.1;Parent=gene-HP17_04821;Dbxref=NCBI_GP:EIE28133.1;Name=EIE28133.1;Note=COG0659 Sulfate permease and related transporters (MFS superfamily);gbkey=CDS;locus_tag=HP17_04821;partial=true;product=Hypothetical protein;protein_id=EIE28133.1;start_range=.,1;transl_table=11 AIHX01000149.1 Genbank gene 1299 1373 . - . ID=gene-HP17_t04923;Name=HP17_t04923;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04923 AIHX01000149.1 Genbank tRNA 1299 1373 . - . ID=rna-HP17_t04923;Parent=gene-HP17_t04923;gbkey=tRNA;locus_tag=HP17_t04923;product=tRNA-Asn AIHX01000149.1 Genbank exon 1299 1373 . - . ID=exon-HP17_t04923-1;Parent=rna-HP17_t04923;gbkey=tRNA;locus_tag=HP17_t04923;product=tRNA-Asn AIHX01000149.1 Genbank gene 1501 2952 . - . ID=gene-HP17_04826;Name=HP17_04826;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04826 AIHX01000149.1 Genbank CDS 1501 2952 . - 0 ID=cds-EIE28134.1;Parent=gene-HP17_04826;Dbxref=NCBI_GP:EIE28134.1;Name=EIE28134.1;gbkey=CDS;locus_tag=HP17_04826;product=outer membrane protein HopA;protein_id=EIE28134.1;transl_table=11 AIHX01000149.1 Genbank gene 3143 3868 . - . ID=gene-HP17_04831;Name=HP17_04831;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04831 AIHX01000149.1 Genbank CDS 3143 3868 . - 0 ID=cds-EIE28135.1;Parent=gene-HP17_04831;Dbxref=NCBI_GP:EIE28135.1;Name=EIE28135.1;Note=COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase;gbkey=CDS;locus_tag=HP17_04831;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=EIE28135.1;transl_table=11 AIHX01000149.1 Genbank gene 3978 4775 . + . ID=gene-HP17_04836;Name=HP17_04836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04836 AIHX01000149.1 Genbank CDS 3978 4775 . + 0 ID=cds-EIE28136.1;Parent=gene-HP17_04836;Dbxref=NCBI_GP:EIE28136.1;Name=EIE28136.1;Note=COG1651 Protein-disulfide isomerase;gbkey=CDS;locus_tag=HP17_04836;product=disulfide isomerase;protein_id=EIE28136.1;transl_table=11 AIHX01000149.1 Genbank gene 4791 5441 . + . ID=gene-HP17_04841;Name=HP17_04841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04841 AIHX01000149.1 Genbank CDS 4791 5441 . + 0 ID=cds-EIE28137.1;Parent=gene-HP17_04841;Dbxref=NCBI_GP:EIE28137.1;Name=EIE28137.1;gbkey=CDS;locus_tag=HP17_04841;product=Hypothetical protein;protein_id=EIE28137.1;transl_table=11 AIHX01000149.1 Genbank gene 5464 6636 . + . ID=gene-HP17_04846;Name=HP17_04846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04846 AIHX01000149.1 Genbank CDS 5464 6636 . + 0 ID=cds-EIE28138.1;Parent=gene-HP17_04846;Dbxref=NCBI_GP:EIE28138.1;Name=EIE28138.1;Note=COG0754 Glutathionylspermidine synthase;gbkey=CDS;locus_tag=HP17_04846;product=Hypothetical protein;protein_id=EIE28138.1;transl_table=11 AIHX01000149.1 Genbank gene 6636 7166 . + . ID=gene-HP17_04851;Name=HP17_04851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04851 AIHX01000149.1 Genbank CDS 6636 7166 . + 0 ID=cds-EIE28139.1;Parent=gene-HP17_04851;Dbxref=NCBI_GP:EIE28139.1;Name=EIE28139.1;gbkey=CDS;locus_tag=HP17_04851;product=Hypothetical protein;protein_id=EIE28139.1;transl_table=11 AIHX01000149.1 Genbank gene 7882 8943 . - . ID=gene-HP17_04856;Name=HP17_04856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04856 AIHX01000149.1 Genbank CDS 7882 8943 . - 0 ID=cds-EIE28140.1;Parent=gene-HP17_04856;Dbxref=NCBI_GP:EIE28140.1;Name=EIE28140.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_04856;product=Cysteine-rich protein E;protein_id=EIE28140.1;transl_table=11 AIHX01000149.1 Genbank gene 9037 9408 . - . ID=gene-HP17_04861;Name=HP17_04861;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04861 AIHX01000149.1 Genbank CDS 9037 9408 . - 0 ID=cds-EIE28141.1;Parent=gene-HP17_04861;Dbxref=NCBI_GP:EIE28141.1;Name=EIE28141.1;gbkey=CDS;locus_tag=HP17_04861;product=Hypothetical protein;protein_id=EIE28141.1;transl_table=11 AIHX01000149.1 Genbank gene 9408 10328 . - . ID=gene-HP17_04866;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=HP17_04866 AIHX01000149.1 Genbank CDS 9408 10328 . - 0 ID=cds-EIE28142.1;Parent=gene-HP17_04866;Dbxref=NCBI_GP:EIE28142.1;Name=EIE28142.1;Note=COG0181 Porphobilinogen deaminase;gbkey=CDS;gene=hemC;locus_tag=HP17_04866;product=porphobilinogen deaminase;protein_id=EIE28142.1;transl_table=11 AIHX01000149.1 Genbank gene 10339 12072 . - . ID=gene-HP17_04871;Name=HP17_04871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04871 AIHX01000149.1 Genbank CDS 10339 12072 . - 0 ID=cds-EIE28143.1;Parent=gene-HP17_04871;Dbxref=NCBI_GP:EIE28143.1;Name=EIE28143.1;Note=COG0442 Prolyl-tRNA synthetase;gbkey=CDS;locus_tag=HP17_04871;product=prolyl-tRNA synthetase;protein_id=EIE28143.1;transl_table=11 AIHX01000149.1 Genbank gene 12076 13425 . - . ID=gene-HP17_04876;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=HP17_04876 AIHX01000149.1 Genbank CDS 12076 13425 . - 0 ID=cds-EIE28144.1;Parent=gene-HP17_04876;Dbxref=NCBI_GP:EIE28144.1;Name=EIE28144.1;Note=COG0373 Glutamyl-tRNA reductase;gbkey=CDS;gene=hemA;locus_tag=HP17_04876;product=glutamyl-tRNA reductase;protein_id=EIE28144.1;transl_table=11 AIHX01000149.1 Genbank gene 13425 14348 . - . ID=gene-HP17_04881;Name=HP17_04881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04881 AIHX01000149.1 Genbank CDS 13425 14348 . - 0 ID=cds-EIE28145.1;Parent=gene-HP17_04881;Dbxref=NCBI_GP:EIE28145.1;Name=EIE28145.1;Note=COG0142 Geranylgeranyl pyrophosphate synthase;gbkey=CDS;locus_tag=HP17_04881;product=Octaprenyl-diphosphate synthase;protein_id=EIE28145.1;transl_table=11 AIHX01000149.1 Genbank gene 14358 14753 . - . ID=gene-HP17_04886;Name=HP17_04886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04886 AIHX01000149.1 Genbank CDS 14358 14753 . - 0 ID=cds-EIE28146.1;Parent=gene-HP17_04886;Dbxref=NCBI_GP:EIE28146.1;Name=EIE28146.1;gbkey=CDS;locus_tag=HP17_04886;product=Hypothetical protein;protein_id=EIE28146.1;transl_table=11 AIHX01000149.1 Genbank gene 14746 15030 . - . ID=gene-HP17_04891;Name=HP17_04891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04891 AIHX01000149.1 Genbank CDS 14746 15030 . - 0 ID=cds-EIE28147.1;Parent=gene-HP17_04891;Dbxref=NCBI_GP:EIE28147.1;Name=EIE28147.1;gbkey=CDS;locus_tag=HP17_04891;product=Hypothetical protein;protein_id=EIE28147.1;transl_table=11 AIHX01000149.1 Genbank gene 15051 15485 . - . ID=gene-HP17_04896;Name=HP17_04896;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04896 AIHX01000149.1 Genbank CDS 15051 15485 . - 0 ID=cds-EIE28148.1;Parent=gene-HP17_04896;Dbxref=NCBI_GP:EIE28148.1;Name=EIE28148.1;Note=COG0783 DNA-binding ferritin-like protein (oxidative damage protectant);gbkey=CDS;locus_tag=HP17_04896;product=Neutrophil activating protein NapA (bacterioferritin);protein_id=EIE28148.1;transl_table=11 AIHX01000149.1 Genbank gene 15693 16838 . - . ID=gene-HP17_04901;Name=HP17_04901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04901 AIHX01000149.1 Genbank CDS 15693 16838 . - 0 ID=cds-EIE28149.1;Parent=gene-HP17_04901;Dbxref=NCBI_GP:EIE28149.1;Name=EIE28149.1;Note=COG0642 Signal transduction histidine kinase;gbkey=CDS;locus_tag=HP17_04901;product=histidine kinase sensor protein;protein_id=EIE28149.1;transl_table=11 AIHX01000149.1 Genbank gene 16835 17152 . - . ID=gene-HP17_04906;Name=HP17_04906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04906 AIHX01000149.1 Genbank CDS 16835 17152 . - 0 ID=cds-EIE28150.1;Parent=gene-HP17_04906;Dbxref=NCBI_GP:EIE28150.1;Name=EIE28150.1;gbkey=CDS;locus_tag=HP17_04906;product=Hypothetical protein;protein_id=EIE28150.1;transl_table=11 AIHX01000149.1 Genbank gene 17149 18177 . - . ID=gene-HP17_04911;Name=flgI;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=HP17_04911 AIHX01000149.1 Genbank CDS 17149 18177 . - 0 ID=cds-EIE28151.1;Parent=gene-HP17_04911;Dbxref=NCBI_GP:EIE28151.1;Name=EIE28151.1;Note=COG1706 Flagellar basal-body P-ring protein;gbkey=CDS;gene=flgI;locus_tag=HP17_04911;product=flagellar basal body P-ring protein;protein_id=EIE28151.1;transl_table=11 AIHX01000149.1 Genbank gene 18366 19305 . + . ID=gene-HP17_04916;Name=HP17_04916;end_range=19305,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04916;partial=true AIHX01000149.1 Genbank CDS 18366 19305 . + 0 ID=cds-EIE28152.1;Parent=gene-HP17_04916;Dbxref=NCBI_GP:EIE28152.1;Name=EIE28152.1;Note=COG0513 Superfamily II DNA and RNA helicases;end_range=19305,.;gbkey=CDS;locus_tag=HP17_04916;partial=true;product=ATP-dependent RNA helicase;protein_id=EIE28152.1;transl_table=11 ##sequence-region AIHX01000150.1 1 6803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000150.1 Genbank region 1 6803 . + . ID=AIHX01000150.1:1..6803;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000150.1 Genbank gene 1 452 . + . ID=gene-HP17_04923;Name=HP17_04923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04923;partial=true;start_range=.,1 AIHX01000150.1 Genbank CDS 1 452 . + 2 ID=cds-EIE28115.1;Parent=gene-HP17_04923;Dbxref=NCBI_GP:EIE28115.1;Name=EIE28115.1;Note=COG0513 Superfamily II DNA and RNA helicases;gbkey=CDS;locus_tag=HP17_04923;partial=true;product=ATP-dependent RNA helicase;protein_id=EIE28115.1;start_range=.,1;transl_table=11 AIHX01000150.1 Genbank gene 473 1561 . + . ID=gene-HP17_04928;Name=HP17_04928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04928 AIHX01000150.1 Genbank CDS 473 1561 . + 0 ID=cds-EIE28116.1;Parent=gene-HP17_04928;Dbxref=NCBI_GP:EIE28116.1;Name=EIE28116.1;Note=COG0330 Membrane protease subunits%2C stomatin/prohibitin homologs;gbkey=CDS;locus_tag=HP17_04928;product=spfH domain-containing protein;protein_id=EIE28116.1;transl_table=11 AIHX01000150.1 Genbank gene 1568 2107 . + . ID=gene-HP17_04933;Name=HP17_04933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04933 AIHX01000150.1 Genbank CDS 1568 2107 . + 0 ID=cds-EIE28117.1;Parent=gene-HP17_04933;Dbxref=NCBI_GP:EIE28117.1;Name=EIE28117.1;gbkey=CDS;locus_tag=HP17_04933;product=Hypothetical protein;protein_id=EIE28117.1;transl_table=11 AIHX01000150.1 Genbank gene 2156 3706 . - . ID=gene-HP17_04938;Name=HP17_04938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04938 AIHX01000150.1 Genbank CDS 2156 3706 . - 0 ID=cds-EIE28118.1;Parent=gene-HP17_04938;Dbxref=NCBI_GP:EIE28118.1;Name=EIE28118.1;Note=COG1123 ATPase components of various ABC-type transport systems%2C contain duplicated ATPase;gbkey=CDS;locus_tag=HP17_04938;product=oligopeptide permease ATPase protein;protein_id=EIE28118.1;transl_table=11 AIHX01000150.1 Genbank gene 3716 4738 . - . ID=gene-HP17_04943;Name=HP17_04943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04943 AIHX01000150.1 Genbank CDS 3716 4738 . - 0 ID=cds-EIE28119.1;Parent=gene-HP17_04943;Dbxref=NCBI_GP:EIE28119.1;Name=EIE28119.1;Note=COG4239 ABC-type uncharacterized transport system%2C permease component;gbkey=CDS;locus_tag=HP17_04943;product=oligopeptide permease integral membrane protein;protein_id=EIE28119.1;transl_table=11 AIHX01000150.1 Genbank gene 4840 4915 . - . ID=gene-HP17_t04965;Name=HP17_t04965;gbkey=Gene;gene_biotype=tRNA;locus_tag=HP17_t04965 AIHX01000150.1 Genbank tRNA 4840 4915 . - . ID=rna-HP17_t04965;Parent=gene-HP17_t04965;gbkey=tRNA;locus_tag=HP17_t04965;product=tRNA-Ala AIHX01000150.1 Genbank exon 4840 4915 . - . ID=exon-HP17_t04965-1;Parent=rna-HP17_t04965;gbkey=tRNA;locus_tag=HP17_t04965;product=tRNA-Ala AIHX01000150.1 Genbank gene 5001 5093 . + . ID=gene-HP17_04948;Name=HP17_04948;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04948 AIHX01000150.1 Genbank CDS 5001 5093 . + 0 ID=cds-EIE28120.1;Parent=gene-HP17_04948;Dbxref=NCBI_GP:EIE28120.1;Name=EIE28120.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_04948;product=Hypothetical protein;protein_id=EIE28120.1;transl_table=11 AIHX01000150.1 Genbank gene 5074 6522 . + . ID=gene-HP17_04953;Name=HP17_04953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04953 AIHX01000150.1 Genbank CDS 5074 6522 . + 0 ID=cds-EIE28121.1;Parent=gene-HP17_04953;Dbxref=NCBI_GP:EIE28121.1;Name=EIE28121.1;gbkey=CDS;locus_tag=HP17_04953;product=Outer membrane protein HopF;protein_id=EIE28121.1;transl_table=11 AIHX01000150.1 Genbank gene 6535 6803 . + . ID=gene-HP17_04958;Name=HP17_04958;end_range=6803,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04958;partial=true AIHX01000150.1 Genbank CDS 6535 6803 . + 0 ID=cds-EIE28122.1;Parent=gene-HP17_04958;Dbxref=NCBI_GP:EIE28122.1;Name=EIE28122.1;end_range=6803,.;gbkey=CDS;locus_tag=HP17_04958;partial=true;product=outer membrane protein HopG;protein_id=EIE28122.1;transl_table=11 ##sequence-region AIHX01000151.1 1 38315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000151.1 Genbank region 1 38315 . + . ID=AIHX01000151.1:1..38315;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000151.1 Genbank gene 1 1122 . + . ID=gene-HP17_04965;Name=HP17_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04965;partial=true;start_range=.,1 AIHX01000151.1 Genbank CDS 1 1122 . + 0 ID=cds-EIE28072.1;Parent=gene-HP17_04965;Dbxref=NCBI_GP:EIE28072.1;Name=EIE28072.1;gbkey=CDS;locus_tag=HP17_04965;partial=true;product=Hypothetical protein;protein_id=EIE28072.1;start_range=.,1;transl_table=11 AIHX01000151.1 Genbank gene 1221 2456 . + . ID=gene-HP17_04970;Name=HP17_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04970 AIHX01000151.1 Genbank CDS 1221 2456 . + 0 ID=cds-EIE28073.1;Parent=gene-HP17_04970;Dbxref=NCBI_GP:EIE28073.1;Name=EIE28073.1;Note=COG0104 Adenylosuccinate synthase;gbkey=CDS;locus_tag=HP17_04970;product=adenylosuccinate synthetase;protein_id=EIE28073.1;transl_table=11 AIHX01000151.1 Genbank gene 2453 2881 . + . ID=gene-HP17_04975;Name=HP17_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04975 AIHX01000151.1 Genbank CDS 2453 2881 . + 0 ID=cds-EIE28074.1;Parent=gene-HP17_04975;Dbxref=NCBI_GP:EIE28074.1;Name=EIE28074.1;gbkey=CDS;locus_tag=HP17_04975;product=Hypothetical protein;protein_id=EIE28074.1;transl_table=11 AIHX01000151.1 Genbank gene 2874 3545 . + . ID=gene-HP17_04980;Name=HP17_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04980 AIHX01000151.1 Genbank CDS 2874 3545 . + 0 ID=cds-EIE28075.1;Parent=gene-HP17_04980;Dbxref=NCBI_GP:EIE28075.1;Name=EIE28075.1;Note=COG3334 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_04980;product=Hypothetical protein;protein_id=EIE28075.1;transl_table=11 AIHX01000151.1 Genbank gene 3545 4597 . + . ID=gene-HP17_04985;Name=HP17_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04985 AIHX01000151.1 Genbank CDS 3545 4597 . + 0 ID=cds-EIE28076.1;Parent=gene-HP17_04985;Dbxref=NCBI_GP:EIE28076.1;Name=EIE28076.1;Note=COG0750 Predicted membrane-associated Zn-dependent proteases 1;gbkey=CDS;locus_tag=HP17_04985;product=Hypothetical protein;protein_id=EIE28076.1;transl_table=11 AIHX01000151.1 Genbank gene 4610 5872 . + . ID=gene-HP17_04990;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=HP17_04990 AIHX01000151.1 Genbank CDS 4610 5872 . + 0 ID=cds-EIE28077.1;Parent=gene-HP17_04990;Dbxref=NCBI_GP:EIE28077.1;Name=EIE28077.1;Note=COG1570 Exonuclease VII%2C large subunit;gbkey=CDS;gene=xseA;locus_tag=HP17_04990;product=exodeoxyribonuclease VII large subunit;protein_id=EIE28077.1;transl_table=11 AIHX01000151.1 Genbank gene 5889 7061 . - . ID=gene-HP17_04995;Name=HP17_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_04995 AIHX01000151.1 Genbank CDS 5889 7061 . - 0 ID=cds-EIE28078.1;Parent=gene-HP17_04995;Dbxref=NCBI_GP:EIE28078.1;Name=EIE28078.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_04995;product=type II DNA modification methyltransferase;protein_id=EIE28078.1;transl_table=11 AIHX01000151.1 Genbank gene 7054 7668 . - . ID=gene-HP17_05000;Name=HP17_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05000 AIHX01000151.1 Genbank CDS 7054 7668 . - 0 ID=cds-EIE28079.1;Parent=gene-HP17_05000;Dbxref=NCBI_GP:EIE28079.1;Name=EIE28079.1;gbkey=CDS;locus_tag=HP17_05000;product=Hypothetical protein;protein_id=EIE28079.1;transl_table=11 AIHX01000151.1 Genbank gene 7901 8338 . + . ID=gene-HP17_05005;Name=HP17_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05005 AIHX01000151.1 Genbank CDS 7901 8338 . + 0 ID=cds-EIE28080.1;Parent=gene-HP17_05005;Dbxref=NCBI_GP:EIE28080.1;Name=EIE28080.1;gbkey=CDS;locus_tag=HP17_05005;product=type II R-M system restriction endonuclease;protein_id=EIE28080.1;transl_table=11 AIHX01000151.1 Genbank gene 8535 9248 . + . ID=gene-HP17_05010;Name=HP17_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05010 AIHX01000151.1 Genbank CDS 8535 9248 . + 0 ID=cds-EIE28081.1;Parent=gene-HP17_05010;Dbxref=NCBI_GP:EIE28081.1;Name=EIE28081.1;Note=COG0863 DNA modification methylase;gbkey=CDS;locus_tag=HP17_05010;product=type II DNA modification (methyltransferase);protein_id=EIE28081.1;transl_table=11 AIHX01000151.1 Genbank gene 9366 11936 . + . ID=gene-HP17_05015;Name=HP17_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05015 AIHX01000151.1 Genbank CDS 9366 11936 . + 0 ID=cds-EIE28082.1;Parent=gene-HP17_05015;Dbxref=NCBI_GP:EIE28082.1;Name=EIE28082.1;Note=COG0542 ATPases with chaperone activity%2C ATP-binding subunit;gbkey=CDS;locus_tag=HP17_05015;product=ATP-dependent protease binding subunit/heat shock protein;protein_id=EIE28082.1;transl_table=11 AIHX01000151.1 Genbank gene 11991 12623 . + . ID=gene-HP17_05020;Name=HP17_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05020 AIHX01000151.1 Genbank CDS 11991 12623 . + 0 ID=cds-EIE28083.1;Parent=gene-HP17_05020;Dbxref=NCBI_GP:EIE28083.1;Name=EIE28083.1;Note=COG0785 Cytochrome c biogenesis protein;gbkey=CDS;locus_tag=HP17_05020;product=cytochrome c biogenesis protein;protein_id=EIE28083.1;transl_table=11 AIHX01000151.1 Genbank gene 12721 13854 . + . ID=gene-HP17_05025;Name=HP17_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05025 AIHX01000151.1 Genbank CDS 12721 13854 . + 0 ID=cds-EIE28084.1;Parent=gene-HP17_05025;Dbxref=NCBI_GP:EIE28084.1;Name=EIE28084.1;Note=COG0044 Dihydroorotase and related cyclic amidohydrolases;gbkey=CDS;locus_tag=HP17_05025;product=dihydroorotase;protein_id=EIE28084.1;transl_table=11 AIHX01000151.1 Genbank gene 13842 15068 . + . ID=gene-HP17_05030;Name=HP17_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05030 AIHX01000151.1 Genbank CDS 13842 15068 . + 0 ID=cds-EIE28085.1;Parent=gene-HP17_05030;Dbxref=NCBI_GP:EIE28085.1;Name=EIE28085.1;Note=COG0402 Cytosine deaminase and related metal-dependent hydrolases;gbkey=CDS;locus_tag=HP17_05030;product=chlorohydrolase;protein_id=EIE28085.1;transl_table=11 AIHX01000151.1 Genbank gene 15129 15371 . + . ID=gene-HP17_05035;Name=HP17_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05035 AIHX01000151.1 Genbank CDS 15129 15371 . + 0 ID=cds-EIE28086.1;Parent=gene-HP17_05035;Dbxref=NCBI_GP:EIE28086.1;Name=EIE28086.1;gbkey=CDS;locus_tag=HP17_05035;product=Hypothetical protein;protein_id=EIE28086.1;transl_table=11 AIHX01000151.1 Genbank gene 15381 16694 . + . ID=gene-HP17_05040;Name=HP17_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05040 AIHX01000151.1 Genbank CDS 15381 16694 . + 0 ID=cds-EIE28087.1;Parent=gene-HP17_05040;Dbxref=NCBI_GP:EIE28087.1;Name=EIE28087.1;Note=COG0621 2-methylthioadenine synthetase;gbkey=CDS;locus_tag=HP17_05040;product=(dimethylallyl)adenosine tRNA methylthiotransferase;protein_id=EIE28087.1;transl_table=11 AIHX01000151.1 Genbank gene 16734 17387 . + . ID=gene-HP17_05045;Name=HP17_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05045 AIHX01000151.1 Genbank CDS 16734 17387 . + 0 ID=cds-EIE28088.1;Parent=gene-HP17_05045;Dbxref=NCBI_GP:EIE28088.1;Name=EIE28088.1;Note=COG2121 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_05045;product=Hypothetical protein;protein_id=EIE28088.1;transl_table=11 AIHX01000151.1 Genbank gene 17380 18354 . + . ID=gene-HP17_05050;Name=HP17_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05050 AIHX01000151.1 Genbank CDS 17380 18354 . + 0 ID=cds-EIE28089.1;Parent=gene-HP17_05050;Dbxref=NCBI_GP:EIE28089.1;Name=EIE28089.1;gbkey=CDS;locus_tag=HP17_05050;product=Hypothetical protein;protein_id=EIE28089.1;transl_table=11 AIHX01000151.1 Genbank gene 18344 18877 . + . ID=gene-HP17_05055;Name=HP17_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05055 AIHX01000151.1 Genbank CDS 18344 18877 . + 0 ID=cds-EIE28090.1;Parent=gene-HP17_05055;Dbxref=NCBI_GP:EIE28090.1;Name=EIE28090.1;gbkey=CDS;locus_tag=HP17_05055;product=Hypothetical protein;protein_id=EIE28090.1;transl_table=11 AIHX01000151.1 Genbank gene 18874 19413 . + . ID=gene-HP17_05060;Name=HP17_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05060 AIHX01000151.1 Genbank CDS 18874 19413 . + 0 ID=cds-EIE28091.1;Parent=gene-HP17_05060;Dbxref=NCBI_GP:EIE28091.1;Name=EIE28091.1;gbkey=CDS;locus_tag=HP17_05060;product=Hypothetical protein;protein_id=EIE28091.1;transl_table=11 AIHX01000151.1 Genbank gene 19430 19828 . + . ID=gene-HP17_05065;Name=HP17_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05065 AIHX01000151.1 Genbank CDS 19430 19828 . + 0 ID=cds-EIE28092.1;Parent=gene-HP17_05065;Dbxref=NCBI_GP:EIE28092.1;Name=EIE28092.1;Note=COG0727 Predicted Fe-S-cluster oxidoreductase;gbkey=CDS;locus_tag=HP17_05065;product=Hypothetical protein;protein_id=EIE28092.1;transl_table=11 AIHX01000151.1 Genbank gene 19865 21157 . + . ID=gene-HP17_05070;Name=HP17_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05070 AIHX01000151.1 Genbank CDS 19865 21157 . + 0 ID=cds-EIE28093.1;Parent=gene-HP17_05070;Dbxref=NCBI_GP:EIE28093.1;Name=EIE28093.1;Note=COG0457 FOG: TPR repeat;gbkey=CDS;locus_tag=HP17_05070;product=ATP-dependent nuclease;protein_id=EIE28093.1;transl_table=11 AIHX01000151.1 Genbank gene 21145 21702 . + . ID=gene-HP17_05075;Name=HP17_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05075 AIHX01000151.1 Genbank CDS 21145 21702 . + 0 ID=cds-EIE28094.1;Parent=gene-HP17_05075;Dbxref=NCBI_GP:EIE28094.1;Name=EIE28094.1;Note=COG0134 Indole-3-glycerol phosphate synthase;gbkey=CDS;locus_tag=HP17_05075;product=Hypothetical protein;protein_id=EIE28094.1;transl_table=11 AIHX01000151.1 Genbank gene 21759 22013 . + . ID=gene-HP17_05080;Name=HP17_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05080 AIHX01000151.1 Genbank CDS 21759 22013 . + 0 ID=cds-EIE28095.1;Parent=gene-HP17_05080;Dbxref=NCBI_GP:EIE28095.1;Name=EIE28095.1;Note=COG1145 Ferredoxin;gbkey=CDS;locus_tag=HP17_05080;product=putative 4Fe-4S ferredoxin-type protein;protein_id=EIE28095.1;transl_table=11 AIHX01000151.1 Genbank gene 22023 23477 . + . ID=gene-HP17_05085;Name=HP17_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05085 AIHX01000151.1 Genbank CDS 22023 23477 . + 0 ID=cds-EIE28096.1;Parent=gene-HP17_05085;Dbxref=NCBI_GP:EIE28096.1;Name=EIE28096.1;Note=COG0248 Exopolyphosphatase;gbkey=CDS;locus_tag=HP17_05085;product=guanosine pentaphosphate phosphohydrolase;protein_id=EIE28096.1;transl_table=11 AIHX01000151.1 Genbank gene 23474 24484 . + . ID=gene-HP17_05090;Name=HP17_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05090 AIHX01000151.1 Genbank CDS 23474 24484 . + 0 ID=cds-EIE28097.1;Parent=gene-HP17_05090;Dbxref=NCBI_GP:EIE28097.1;Name=EIE28097.1;Note=COG0859 ADP-heptose:LPS heptosyltransferase;gbkey=CDS;locus_tag=HP17_05090;product=lipopolysaccharide heptosyltransferase-1;protein_id=EIE28097.1;transl_table=11 AIHX01000151.1 Genbank gene 24481 25467 . + . ID=gene-HP17_05095;Name=HP17_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05095 AIHX01000151.1 Genbank CDS 24481 25467 . + 0 ID=cds-EIE28098.1;Parent=gene-HP17_05095;Dbxref=NCBI_GP:EIE28098.1;Name=EIE28098.1;Note=COG1560 Lauroyl/myristoyl acyltransferase;gbkey=CDS;locus_tag=HP17_05095;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=EIE28098.1;transl_table=11 AIHX01000151.1 Genbank gene 25567 26682 . - . ID=gene-HP17_05100;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=HP17_05100 AIHX01000151.1 Genbank CDS 25567 26682 . - 0 ID=cds-EIE28099.1;Parent=gene-HP17_05100;Dbxref=NCBI_GP:EIE28099.1;Name=EIE28099.1;Note=COG0343 Queuine/archaeosine tRNA-ribosyltransferase;gbkey=CDS;gene=tgt;locus_tag=HP17_05100;product=queuine tRNA-ribosyltransferase;protein_id=EIE28099.1;transl_table=11 AIHX01000151.1 Genbank gene 28179 29210 . + . ID=gene-HP17_05115;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=HP17_05115 AIHX01000151.1 Genbank CDS 28179 29210 . + 0 ID=cds-EIE28100.1;Parent=gene-HP17_05115;Dbxref=NCBI_GP:EIE28100.1;Name=EIE28100.1;Note=COG0337 3-dehydroquinate synthetase;gbkey=CDS;gene=aroB;locus_tag=HP17_05115;product=3-dehydroquinate synthase;protein_id=EIE28100.1;transl_table=11 AIHX01000151.1 Genbank gene 29201 30772 . + . ID=gene-HP17_05120;Name=HP17_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05120 AIHX01000151.1 Genbank CDS 29201 30772 . + 0 ID=cds-EIE28101.1;Parent=gene-HP17_05120;Dbxref=NCBI_GP:EIE28101.1;Name=EIE28101.1;Note=COG0668 Small-conductance mechanosensitive channel;gbkey=CDS;locus_tag=HP17_05120;product=Hypothetical protein;protein_id=EIE28101.1;transl_table=11 AIHX01000151.1 Genbank gene 30769 32025 . + . ID=gene-HP17_05125;Name=HP17_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05125 AIHX01000151.1 Genbank CDS 30769 32025 . + 0 ID=cds-EIE28102.1;Parent=gene-HP17_05125;Dbxref=NCBI_GP:EIE28102.1;Name=EIE28102.1;Note=COG0621 2-methylthioadenine synthetase;gbkey=CDS;locus_tag=HP17_05125;product=Hypothetical protein;protein_id=EIE28102.1;transl_table=11 AIHX01000151.1 Genbank gene 32012 33664 . + . ID=gene-HP17_05130;Name=HP17_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05130 AIHX01000151.1 Genbank CDS 32012 33664 . + 0 ID=cds-EIE28103.1;Parent=gene-HP17_05130;Dbxref=NCBI_GP:EIE28103.1;Name=EIE28103.1;Note=COG0465 ATP-dependent Zn proteases;gbkey=CDS;locus_tag=HP17_05130;product=Cell division protein FtsH;protein_id=EIE28103.1;transl_table=11 AIHX01000151.1 Genbank gene 33667 34185 . + . ID=gene-HP17_05135;Name=HP17_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05135 AIHX01000151.1 Genbank CDS 33667 34185 . + 0 ID=cds-EIE28104.1;Parent=gene-HP17_05135;Dbxref=NCBI_GP:EIE28104.1;Name=EIE28104.1;gbkey=CDS;locus_tag=HP17_05135;product=Hypothetical protein;protein_id=EIE28104.1;transl_table=11 AIHX01000151.1 Genbank gene 34198 34671 . + . ID=gene-HP17_05140;Name=HP17_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05140 AIHX01000151.1 Genbank CDS 34198 34671 . + 0 ID=cds-EIE28105.1;Parent=gene-HP17_05140;Dbxref=NCBI_GP:EIE28105.1;Name=EIE28105.1;gbkey=CDS;locus_tag=HP17_05140;product=Hypothetical protein;protein_id=EIE28105.1;transl_table=11 AIHX01000151.1 Genbank gene 34725 38315 . + . ID=gene-HP17_05145;Name=HP17_05145;end_range=38315,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05145;partial=true AIHX01000151.1 Genbank CDS 34725 38315 . + 0 ID=cds-EIE28106.1;Parent=gene-HP17_05145;Dbxref=NCBI_GP:EIE28106.1;Name=EIE28106.1;end_range=38315,.;gbkey=CDS;locus_tag=HP17_05145;partial=true;product=putative vacuolating cytotoxin (VacA)-like protein;protein_id=EIE28106.1;transl_table=11 ##sequence-region AIHX01000152.1 1 2054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000152.1 Genbank region 1 2054 . + . ID=AIHX01000152.1:1..2054;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000152.1 Genbank gene 1 2054 . + . ID=gene-HP17_05150;Name=HP17_05150;end_range=2054,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05150;partial=true;start_range=.,1 AIHX01000152.1 Genbank CDS 1 2054 . + 2 ID=cds-EIE28051.1;Parent=gene-HP17_05150;Dbxref=NCBI_GP:EIE28051.1;Name=EIE28051.1;end_range=2054,.;gbkey=CDS;locus_tag=HP17_05150;partial=true;product=toxin-like outer membrane protein;protein_id=EIE28051.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000153.1 1 4631 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000153.1 Genbank region 1 4631 . + . ID=AIHX01000153.1:1..4631;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000153.1 Genbank gene 1 786 . - . ID=gene-HP17_00380;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=HP17_00380;partial=true;start_range=.,1 AIHX01000153.1 Genbank CDS 1 786 . - 0 ID=cds-EIE28046.1;Parent=gene-HP17_00380;Dbxref=NCBI_GP:EIE28046.1;Name=EIE28046.1;Note=COG0837 Glucokinase;gbkey=CDS;gene=glk;locus_tag=HP17_00380;partial=true;product=glucokinase;protein_id=EIE28046.1;start_range=.,1;transl_table=11 AIHX01000153.1 Genbank gene 773 1456 . - . ID=gene-HP17_00385;Name=HP17_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00385 AIHX01000153.1 Genbank CDS 773 1456 . - 0 ID=cds-EIE28047.1;Parent=gene-HP17_00385;Dbxref=NCBI_GP:EIE28047.1;Name=EIE28047.1;Note=COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase;gbkey=CDS;locus_tag=HP17_00385;product=6-phosphogluconolactonase;protein_id=EIE28047.1;transl_table=11 AIHX01000153.1 Genbank gene 1467 2744 . - . ID=gene-HP17_00390;Name=HP17_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00390 AIHX01000153.1 Genbank CDS 1467 2744 . - 0 ID=cds-EIE28048.1;Parent=gene-HP17_00390;Dbxref=NCBI_GP:EIE28048.1;Name=EIE28048.1;Note=COG0364 Glucose-6-phosphate 1-dehydrogenase;gbkey=CDS;locus_tag=HP17_00390;product=glucose-6-phosphate 1-dehydrogenase;protein_id=EIE28048.1;transl_table=11 AIHX01000153.1 Genbank gene 2810 4631 . + . ID=gene-HP17_00395;Name=HP17_00395;end_range=4631,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_00395;partial=true AIHX01000153.1 Genbank CDS 2810 4631 . + 0 ID=cds-EIE28049.1;Parent=gene-HP17_00395;Dbxref=NCBI_GP:EIE28049.1;Name=EIE28049.1;Note=COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase;end_range=4631,.;gbkey=CDS;locus_tag=HP17_00395;partial=true;product=phosphogluconate dehydratase;protein_id=EIE28049.1;transl_table=11 ##sequence-region AIHX01000154.1 1 17425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000154.1 Genbank region 1 17425 . + . ID=AIHX01000154.1:1..17425;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000154.1 Genbank gene 1 3005 . + . ID=gene-HP17_05155;Name=HP17_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05155;partial=true;start_range=.,1 AIHX01000154.1 Genbank CDS 1 3005 . + 2 ID=cds-EIE28026.1;Parent=gene-HP17_05155;Dbxref=NCBI_GP:EIE28026.1;Name=EIE28026.1;gbkey=CDS;locus_tag=HP17_05155;partial=true;product=putative vacuolating cytotoxin(VacA)-like protein;protein_id=EIE28026.1;start_range=.,1;transl_table=11 AIHX01000154.1 Genbank gene 3053 4270 . + . ID=gene-HP17_05160;Name=HP17_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05160 AIHX01000154.1 Genbank CDS 3053 4270 . + 0 ID=cds-EIE28027.1;Parent=gene-HP17_05160;Dbxref=NCBI_GP:EIE28027.1;Name=EIE28027.1;Note=COG0019 Diaminopimelate decarboxylase;gbkey=CDS;locus_tag=HP17_05160;product=diaminopimelate decarboxylase;protein_id=EIE28027.1;transl_table=11 AIHX01000154.1 Genbank gene 4275 4565 . + . ID=gene-HP17_05165;Name=HP17_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05165 AIHX01000154.1 Genbank CDS 4275 4565 . + 0 ID=cds-EIE28028.1;Parent=gene-HP17_05165;Dbxref=NCBI_GP:EIE28028.1;Name=EIE28028.1;Note=COG1605 Chorismate mutase;gbkey=CDS;locus_tag=HP17_05165;product=chorismate mutase;protein_id=EIE28028.1;transl_table=11 AIHX01000154.1 Genbank gene 4578 5450 . + . ID=gene-HP17_05170;Name=HP17_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05170 AIHX01000154.1 Genbank CDS 4578 5450 . + 0 ID=cds-EIE28029.1;Parent=gene-HP17_05170;Dbxref=NCBI_GP:EIE28029.1;Name=EIE28029.1;Note=COG4866 Uncharacterized conserved protein;gbkey=CDS;locus_tag=HP17_05170;product=Hypothetical protein;protein_id=EIE28029.1;transl_table=11 AIHX01000154.1 Genbank gene 5451 7130 . + . ID=gene-HP17_05175;Name=HP17_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05175 AIHX01000154.1 Genbank CDS 5451 7130 . + 0 ID=cds-EIE28030.1;Parent=gene-HP17_05175;Dbxref=NCBI_GP:EIE28030.1;Name=EIE28030.1;Note=COG0147 Anthranilate/para-aminobenzoate synthases component I;gbkey=CDS;locus_tag=HP17_05175;product=para-aminobenzoate synthetase;protein_id=EIE28030.1;transl_table=11 AIHX01000154.1 Genbank gene 7324 8343 . + . ID=gene-HP17_05180;Name=amiE;gbkey=Gene;gene=amiE;gene_biotype=protein_coding;locus_tag=HP17_05180 AIHX01000154.1 Genbank CDS 7324 8343 . + 0 ID=cds-EIE28031.1;Parent=gene-HP17_05180;Dbxref=NCBI_GP:EIE28031.1;Name=EIE28031.1;Note=COG0388 Predicted amidohydrolase;gbkey=CDS;gene=amiE;locus_tag=HP17_05180;product=acylamide amidohydrolase;protein_id=EIE28031.1;transl_table=11 AIHX01000154.1 Genbank gene 8425 10911 . - . ID=gene-HP17_05185;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=HP17_05185 AIHX01000154.1 Genbank CDS 8425 10911 . - 0 ID=cds-EIE28032.1;Parent=gene-HP17_05185;Dbxref=NCBI_GP:EIE28032.1;Name=EIE28032.1;Note=COG1344 Flagellin and related hook-associated proteins;gbkey=CDS;gene=flgL;locus_tag=HP17_05185;product=flagellar hook-associated protein FlgL;protein_id=EIE28032.1;transl_table=11 AIHX01000154.1 Genbank gene 11154 11468 . + . ID=gene-HP17_05190;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=HP17_05190 AIHX01000154.1 Genbank CDS 11154 11468 . + 0 ID=cds-EIE28033.1;Parent=gene-HP17_05190;Dbxref=NCBI_GP:EIE28033.1;Name=EIE28033.1;Note=COG0261 Ribosomal protein L21;gbkey=CDS;gene=rplU;locus_tag=HP17_05190;product=50S ribosomal protein L21;protein_id=EIE28033.1;transl_table=11 AIHX01000154.1 Genbank gene 11483 11749 . + . ID=gene-HP17_05195;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HP17_05195 AIHX01000154.1 Genbank CDS 11483 11749 . + 0 ID=cds-EIE28034.1;Parent=gene-HP17_05195;Dbxref=NCBI_GP:EIE28034.1;Name=EIE28034.1;Note=COG0211 Ribosomal protein L27;gbkey=CDS;gene=rpmA;locus_tag=HP17_05195;product=50S ribosomal protein L27;protein_id=EIE28034.1;transl_table=11 AIHX01000154.1 Genbank gene 11866 13515 . + . ID=gene-HP17_05200;Name=HP17_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05200 AIHX01000154.1 Genbank CDS 11866 13515 . + 0 ID=cds-EIE28035.1;Parent=gene-HP17_05200;Dbxref=NCBI_GP:EIE28035.1;Name=EIE28035.1;Note=COG0747 ABC-type dipeptide transport system%2C periplasmic component;gbkey=CDS;locus_tag=HP17_05200;product=peptide ABC transporter substrate-binding protein;protein_id=EIE28035.1;transl_table=11 AIHX01000154.1 Genbank gene 13526 14530 . + . ID=gene-HP17_05205;Name=HP17_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05205 AIHX01000154.1 Genbank CDS 13526 14530 . + 0 ID=cds-EIE28036.1;Parent=gene-HP17_05205;Dbxref=NCBI_GP:EIE28036.1;Name=EIE28036.1;Note=COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components;gbkey=CDS;locus_tag=HP17_05205;product=peptide ABC transporter permease;protein_id=EIE28036.1;transl_table=11 AIHX01000154.1 Genbank gene 14530 15387 . + . ID=gene-HP17_05210;Name=HP17_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05210 AIHX01000154.1 Genbank CDS 14530 15387 . + 0 ID=cds-EIE28037.1;Parent=gene-HP17_05210;Dbxref=NCBI_GP:EIE28037.1;Name=EIE28037.1;Note=COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components;gbkey=CDS;locus_tag=HP17_05210;product=ABC-type transport system%2C permease;protein_id=EIE28037.1;transl_table=11 AIHX01000154.1 Genbank gene 15399 16262 . + . ID=gene-HP17_05215;Name=HP17_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05215 AIHX01000154.1 Genbank CDS 15399 16262 . + 0 ID=cds-EIE28038.1;Parent=gene-HP17_05215;Dbxref=NCBI_GP:EIE28038.1;Name=EIE28038.1;Note=COG0444 ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_05215;product=ABC-type transport system%2C ATP-binding protein;protein_id=EIE28038.1;transl_table=11 AIHX01000154.1 Genbank gene 16259 17065 . + . ID=gene-HP17_05220;Name=HP17_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05220 AIHX01000154.1 Genbank CDS 16259 17065 . + 0 ID=cds-EIE28039.1;Parent=gene-HP17_05220;Dbxref=NCBI_GP:EIE28039.1;Name=EIE28039.1;Note=COG4608 ABC-type oligopeptide transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_05220;product=dipeptide ABC transporter;protein_id=EIE28039.1;transl_table=11 AIHX01000154.1 Genbank gene 17084 17425 . + . ID=gene-HP17_05225;Name=obgE;end_range=17425,.;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=HP17_05225;partial=true AIHX01000154.1 Genbank CDS 17084 17425 . + 0 ID=cds-EIE28040.1;Parent=gene-HP17_05225;Dbxref=NCBI_GP:EIE28040.1;Name=EIE28040.1;Note=COG0536 Predicted GTPase;end_range=17425,.;gbkey=CDS;gene=obgE;locus_tag=HP17_05225;partial=true;product=GTPase CgtA;protein_id=EIE28040.1;transl_table=11 ##sequence-region AIHX01000155.1 1 12251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000155.1 Genbank region 1 12251 . + . ID=AIHX01000155.1:1..12251;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000155.1 Genbank gene 1 720 . + . ID=gene-HP17_05230;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=HP17_05230;partial=true;start_range=.,1 AIHX01000155.1 Genbank CDS 1 720 . + 0 ID=cds-EIE28009.1;Parent=gene-HP17_05230;Dbxref=NCBI_GP:EIE28009.1;Name=EIE28009.1;Note=COG0536 Predicted GTPase;gbkey=CDS;gene=obgE;locus_tag=HP17_05230;partial=true;product=GTPase CgtA;protein_id=EIE28009.1;start_range=.,1;transl_table=11 AIHX01000155.1 Genbank gene 757 1752 . + . ID=gene-HP17_05235;Name=HP17_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05235 AIHX01000155.1 Genbank CDS 757 1752 . + 0 ID=cds-EIE28010.1;Parent=gene-HP17_05235;Dbxref=NCBI_GP:EIE28010.1;Name=EIE28010.1;gbkey=CDS;locus_tag=HP17_05235;product=Hypothetical protein;protein_id=EIE28010.1;transl_table=11 AIHX01000155.1 Genbank gene 1993 2547 . + . ID=gene-HP17_05240;Name=HP17_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05240 AIHX01000155.1 Genbank CDS 1993 2547 . + 0 ID=cds-EIE28011.1;Parent=gene-HP17_05240;Dbxref=NCBI_GP:EIE28011.1;Name=EIE28011.1;gbkey=CDS;locus_tag=HP17_05240;product=Hypothetical protein;protein_id=EIE28011.1;transl_table=11 AIHX01000155.1 Genbank gene 2557 3849 . + . ID=gene-HP17_05245;Name=HP17_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05245 AIHX01000155.1 Genbank CDS 2557 3849 . + 0 ID=cds-EIE28012.1;Parent=gene-HP17_05245;Dbxref=NCBI_GP:EIE28012.1;Name=EIE28012.1;Note=COG0001 Glutamate-1-semialdehyde aminotransferase;gbkey=CDS;locus_tag=HP17_05245;product=glutamate-1-semialdehyde aminotransferase;protein_id=EIE28012.1;transl_table=11 AIHX01000155.1 Genbank gene 3855 4118 . + . ID=gene-HP17_05250;Name=HP17_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05250 AIHX01000155.1 Genbank CDS 3855 4118 . + 0 ID=cds-EIE28013.1;Parent=gene-HP17_05250;Dbxref=NCBI_GP:EIE28013.1;Name=EIE28013.1;gbkey=CDS;locus_tag=HP17_05250;product=Hypothetical protein;protein_id=EIE28013.1;transl_table=11 AIHX01000155.1 Genbank gene 4134 4538 . + . ID=gene-HP17_05255;Name=HP17_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05255 AIHX01000155.1 Genbank CDS 4134 4538 . + 0 ID=cds-EIE28014.1;Parent=gene-HP17_05255;Dbxref=NCBI_GP:EIE28014.1;Name=EIE28014.1;gbkey=CDS;locus_tag=HP17_05255;product=Hypothetical protein;protein_id=EIE28014.1;transl_table=11 AIHX01000155.1 Genbank gene 4622 5506 . + . ID=gene-HP17_05260;Name=HP17_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05260 AIHX01000155.1 Genbank CDS 4622 5506 . + 0 ID=cds-EIE28015.1;Parent=gene-HP17_05260;Dbxref=NCBI_GP:EIE28015.1;Name=EIE28015.1;Note=COG0388 Predicted amidohydrolase;gbkey=CDS;locus_tag=HP17_05260;product=putative N-carbamoyl-D-amino acid amidohydrolase;protein_id=EIE28015.1;transl_table=11 AIHX01000155.1 Genbank gene 5519 6406 . + . ID=gene-HP17_05265;Name=HP17_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05265 AIHX01000155.1 Genbank CDS 5519 6406 . + 0 ID=cds-EIE28016.1;Parent=gene-HP17_05265;Dbxref=NCBI_GP:EIE28016.1;Name=EIE28016.1;Note=COG0726 Predicted xylanase/chitin deacetylase;gbkey=CDS;locus_tag=HP17_05265;product=polysaccharide deacetylase;protein_id=EIE28016.1;transl_table=11 AIHX01000155.1 Genbank pseudogene 6453 7160 . - . ID=gene-HP17_05270;Name=HP17_05270;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_05270;pseudo=true AIHX01000155.1 Genbank sequence_feature 6453 7160 . - . ID=id-HP17_05270;Note=potential frameshift: common BLAST hit: gi|208434257|ref|YP_002265923.1| typeII restriction enzyme;gbkey=misc_feature;locus_tag=HP17_05270;pseudo=true AIHX01000155.1 Genbank gene 7147 8265 . - . ID=gene-HP17_05280;Name=HP17_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05280 AIHX01000155.1 Genbank CDS 7147 8265 . - 0 ID=cds-EIE28017.1;Parent=gene-HP17_05280;Dbxref=NCBI_GP:EIE28017.1;Name=EIE28017.1;Note=COG0863 DNA modification methylase;gbkey=CDS;locus_tag=HP17_05280;product=DNA methylase;protein_id=EIE28017.1;transl_table=11 AIHX01000155.1 Genbank gene 8361 8729 . + . ID=gene-HP17_05285;Name=HP17_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05285 AIHX01000155.1 Genbank CDS 8361 8729 . + 0 ID=cds-EIE28018.1;Parent=gene-HP17_05285;Dbxref=NCBI_GP:EIE28018.1;Name=EIE28018.1;gbkey=CDS;locus_tag=HP17_05285;product=Hypothetical protein;protein_id=EIE28018.1;transl_table=11 AIHX01000155.1 Genbank gene 8729 9691 . + . ID=gene-HP17_05290;Name=HP17_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05290 AIHX01000155.1 Genbank CDS 8729 9691 . + 0 ID=cds-EIE28019.1;Parent=gene-HP17_05290;Dbxref=NCBI_GP:EIE28019.1;Name=EIE28019.1;Note=COG0523 Putative GTPases (G3E family);gbkey=CDS;locus_tag=HP17_05290;product=conserved ATP/GTP binding protein;protein_id=EIE28019.1;transl_table=11 AIHX01000155.1 Genbank gene 9697 10842 . - . ID=gene-HP17_05295;Name=HP17_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05295 AIHX01000155.1 Genbank CDS 9697 10842 . - 0 ID=cds-EIE28020.1;Parent=gene-HP17_05295;Dbxref=NCBI_GP:EIE28020.1;Name=EIE28020.1;Note=COG0477 Permeases of the major facilitator superfamily;gbkey=CDS;locus_tag=HP17_05295;product=nitrite extrusion protein;protein_id=EIE28020.1;transl_table=11 AIHX01000155.1 Genbank gene 11180 11500 . - . ID=gene-HP17_05300;Name=HP17_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05300 AIHX01000155.1 Genbank CDS 11180 11500 . - 0 ID=cds-EIE28021.1;Parent=gene-HP17_05300;Dbxref=NCBI_GP:EIE28021.1;Name=EIE28021.1;Note=COG3041 Uncharacterized protein conserved in bacteria;gbkey=CDS;locus_tag=HP17_05300;product=Hypothetical protein;protein_id=EIE28021.1;transl_table=11 AIHX01000155.1 Genbank gene 11487 11843 . - . ID=gene-HP17_05305;Name=HP17_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05305 AIHX01000155.1 Genbank CDS 11487 11843 . - 0 ID=cds-EIE28022.1;Parent=gene-HP17_05305;Dbxref=NCBI_GP:EIE28022.1;Name=EIE28022.1;gbkey=CDS;locus_tag=HP17_05305;product=Hypothetical protein;protein_id=EIE28022.1;transl_table=11 ##sequence-region AIHX01000156.1 1 11920 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000156.1 Genbank region 1 11920 . + . ID=AIHX01000156.1:1..11920;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000156.1 Genbank gene 1 87 . + . ID=gene-HP17_05310;Name=HP17_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05310;partial=true;start_range=.,1 AIHX01000156.1 Genbank CDS 1 87 . + 0 ID=cds-EIE27991.1;Parent=gene-HP17_05310;Dbxref=NCBI_GP:EIE27991.1;Name=EIE27991.1;gbkey=CDS;locus_tag=HP17_05310;partial=true;product=alpha-(1%2C3)-fucosyltransferase;protein_id=EIE27991.1;start_range=.,1;transl_table=11 AIHX01000156.1 Genbank gene 96 674 . - . ID=gene-HP17_05315;Name=HP17_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05315 AIHX01000156.1 Genbank CDS 96 674 . - 0 ID=cds-EIE27992.1;Parent=gene-HP17_05315;Dbxref=NCBI_GP:EIE27992.1;Name=EIE27992.1;Note=COG1573 Uracil-DNA glycosylase;gbkey=CDS;locus_tag=HP17_05315;product=Hypothetical protein;protein_id=EIE27992.1;transl_table=11 AIHX01000156.1 Genbank gene 731 2137 . - . ID=gene-HP17_05320;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=HP17_05320 AIHX01000156.1 Genbank CDS 731 2137 . - 0 ID=cds-EIE27993.1;Parent=gene-HP17_05320;Dbxref=NCBI_GP:EIE27993.1;Name=EIE27993.1;Note=COG1027 Aspartate ammonia-lyase;gbkey=CDS;gene=aspA;locus_tag=HP17_05320;product=aspartate ammonia-lyase;protein_id=EIE27993.1;transl_table=11 AIHX01000156.1 Genbank gene 2195 3463 . - . ID=gene-HP17_05325;Name=HP17_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05325 AIHX01000156.1 Genbank CDS 2195 3463 . - 0 ID=cds-EIE27994.1;Parent=gene-HP17_05325;Dbxref=NCBI_GP:EIE27994.1;Name=EIE27994.1;Note=COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase;gbkey=CDS;locus_tag=HP17_05325;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=EIE27994.1;transl_table=11 AIHX01000156.1 Genbank gene 3466 3873 . - . ID=gene-HP17_05330;Name=HP17_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05330 AIHX01000156.1 Genbank CDS 3466 3873 . - 0 ID=cds-EIE27995.1;Parent=gene-HP17_05330;Dbxref=NCBI_GP:EIE27995.1;Name=EIE27995.1;gbkey=CDS;locus_tag=HP17_05330;product=Hypothetical protein;protein_id=EIE27995.1;transl_table=11 AIHX01000156.1 Genbank gene 3885 4706 . - . ID=gene-HP17_05335;Name=HP17_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05335 AIHX01000156.1 Genbank CDS 3885 4706 . - 0 ID=cds-EIE27996.1;Parent=gene-HP17_05335;Dbxref=NCBI_GP:EIE27996.1;Name=EIE27996.1;Note=COG1210 UDP-glucose pyrophosphorylase;gbkey=CDS;locus_tag=HP17_05335;product=UTP--glucose-1-phosphate uridylyltransferase subunit GalU;protein_id=EIE27996.1;transl_table=11 AIHX01000156.1 Genbank gene 4703 6385 . - . ID=gene-HP17_05340;Name=HP17_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05340 AIHX01000156.1 Genbank CDS 4703 6385 . - 0 ID=cds-EIE27997.1;Parent=gene-HP17_05340;Dbxref=NCBI_GP:EIE27997.1;Name=EIE27997.1;Note=COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains);gbkey=CDS;locus_tag=HP17_05340;product=soluble lytic murein transglycosylase;protein_id=EIE27997.1;transl_table=11 AIHX01000156.1 Genbank gene 6394 6687 . - . ID=gene-HP17_05345;Name=HP17_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05345 AIHX01000156.1 Genbank CDS 6394 6687 . - 0 ID=cds-EIE27998.1;Parent=gene-HP17_05345;Dbxref=NCBI_GP:EIE27998.1;Name=EIE27998.1;Note=COG0762 Predicted integral membrane protein;gbkey=CDS;locus_tag=HP17_05345;product=Hypothetical protein;protein_id=EIE27998.1;transl_table=11 AIHX01000156.1 Genbank gene 6684 8003 . - . ID=gene-HP17_05350;Name=HP17_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05350 AIHX01000156.1 Genbank CDS 6684 8003 . - 0 ID=cds-EIE27999.1;Parent=gene-HP17_05350;Dbxref=NCBI_GP:EIE27999.1;Name=EIE27999.1;Note=COG0008 Glutamyl- and glutaminyl-tRNA synthetases;gbkey=CDS;locus_tag=HP17_05350;product=glutamylglutaminyl-tRNA synthetase;protein_id=EIE27999.1;transl_table=11 AIHX01000156.1 Genbank gene 8168 8821 . - . ID=gene-HP17_05355;Name=HP17_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05355 AIHX01000156.1 Genbank CDS 8168 8821 . - 0 ID=cds-EIE28000.1;Parent=gene-HP17_05355;Dbxref=NCBI_GP:EIE28000.1;Name=EIE28000.1;Note=COG0778 Nitroreductase;gbkey=CDS;locus_tag=HP17_05355;product=NAD(P)H-flavin oxidoreductase;protein_id=EIE28000.1;transl_table=11 AIHX01000156.1 Genbank gene 8823 9680 . - . ID=gene-HP17_05360;Name=HP17_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05360 AIHX01000156.1 Genbank CDS 8823 9680 . - 0 ID=cds-EIE28001.1;Parent=gene-HP17_05360;Dbxref=NCBI_GP:EIE28001.1;Name=EIE28001.1;Note=COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases;gbkey=CDS;locus_tag=HP17_05360;product=3-hydroxyacid dehydrogenase;protein_id=EIE28001.1;transl_table=11 AIHX01000156.1 Genbank gene 9695 10189 . - . ID=gene-HP17_05365;Name=HP17_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05365 AIHX01000156.1 Genbank CDS 9695 10189 . - 0 ID=cds-EIE28002.1;Parent=gene-HP17_05365;Dbxref=NCBI_GP:EIE28002.1;Name=EIE28002.1;gbkey=CDS;locus_tag=HP17_05365;product=Hypothetical protein;protein_id=EIE28002.1;transl_table=11 AIHX01000156.1 Genbank gene 10212 11420 . - . ID=gene-HP17_05370;Name=HP17_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05370 AIHX01000156.1 Genbank CDS 10212 11420 . - 0 ID=cds-EIE28003.1;Parent=gene-HP17_05370;Dbxref=NCBI_GP:EIE28003.1;Name=EIE28003.1;Note=COG0617 tRNA nucleotidyltransferase/poly(A) polymerase;gbkey=CDS;locus_tag=HP17_05370;product=polynucleotide adenylyltransferase;protein_id=EIE28003.1;transl_table=11 AIHX01000156.1 Genbank gene 11483 11920 . + . ID=gene-HP17_05375;Name=HP17_05375;end_range=11920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05375;partial=true AIHX01000156.1 Genbank CDS 11483 11920 . + 0 ID=cds-EIE28004.1;Parent=gene-HP17_05375;Dbxref=NCBI_GP:EIE28004.1;Name=EIE28004.1;Note=COG0603 Predicted PP-loop superfamily ATPase;end_range=11920,.;gbkey=CDS;locus_tag=HP17_05375;partial=true;product=Hypothetical protein;protein_id=EIE28004.1;transl_table=11 ##sequence-region AIHX01000157.1 1 6092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000157.1 Genbank region 1 6092 . + . ID=AIHX01000157.1:1..6092;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000157.1 Genbank gene 1 230 . + . ID=gene-HP17_05380;Name=HP17_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05380;partial=true;start_range=.,1 AIHX01000157.1 Genbank CDS 1 230 . + 2 ID=cds-EIE27978.1;Parent=gene-HP17_05380;Dbxref=NCBI_GP:EIE27978.1;Name=EIE27978.1;Note=COG0603 Predicted PP-loop superfamily ATPase;gbkey=CDS;locus_tag=HP17_05380;partial=true;product=Hypothetical protein;protein_id=EIE27978.1;start_range=.,1;transl_table=11 AIHX01000157.1 Genbank gene 299 1222 . - . ID=gene-HP17_05385;Name=HP17_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05385 AIHX01000157.1 Genbank CDS 299 1222 . - 0 ID=cds-EIE27979.1;Parent=gene-HP17_05385;Dbxref=NCBI_GP:EIE27979.1;Name=EIE27979.1;gbkey=CDS;locus_tag=HP17_05385;product=outer membrane protein;protein_id=EIE27979.1;transl_table=11 AIHX01000157.1 Genbank gene 1415 1867 . + . ID=gene-HP17_05390;Name=HP17_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05390 AIHX01000157.1 Genbank CDS 1415 1867 . + 0 ID=cds-EIE27980.1;Parent=gene-HP17_05390;Dbxref=NCBI_GP:EIE27980.1;Name=EIE27980.1;gbkey=CDS;locus_tag=HP17_05390;product=Hypothetical protein;protein_id=EIE27980.1;transl_table=11 AIHX01000157.1 Genbank gene 2004 2417 . + . ID=gene-HP17_05395;Name=HP17_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05395 AIHX01000157.1 Genbank CDS 2004 2417 . + 0 ID=cds-EIE27981.1;Parent=gene-HP17_05395;Dbxref=NCBI_GP:EIE27981.1;Name=EIE27981.1;gbkey=CDS;locus_tag=HP17_05395;product=Hypothetical protein;protein_id=EIE27981.1;transl_table=11 AIHX01000157.1 Genbank gene 2422 3960 . - . ID=gene-HP17_05400;Name=HP17_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05400 AIHX01000157.1 Genbank CDS 2422 3960 . - 0 ID=cds-EIE27982.1;Parent=gene-HP17_05400;Dbxref=NCBI_GP:EIE27982.1;Name=EIE27982.1;gbkey=CDS;locus_tag=HP17_05400;product=Hypothetical protein;protein_id=EIE27982.1;transl_table=11 AIHX01000157.1 Genbank gene 3962 4498 . - . ID=gene-HP17_05405;Name=HP17_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05405 AIHX01000157.1 Genbank CDS 3962 4498 . - 0 ID=cds-EIE27983.1;Parent=gene-HP17_05405;Dbxref=NCBI_GP:EIE27983.1;Name=EIE27983.1;Note=COG0680 Ni%2CFe-hydrogenase maturation factor;gbkey=CDS;locus_tag=HP17_05405;product=quinone-reactive Ni/Fe hydrogenase (hydD);protein_id=EIE27983.1;transl_table=11 AIHX01000157.1 Genbank gene 4495 5169 . - . ID=gene-HP17_05410;Name=HP17_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05410 AIHX01000157.1 Genbank CDS 4495 5169 . - 0 ID=cds-EIE27984.1;Parent=gene-HP17_05410;Dbxref=NCBI_GP:EIE27984.1;Name=EIE27984.1;Note=COG1969 Ni%2CFe-hydrogenase I cytochrome b subunit;gbkey=CDS;locus_tag=HP17_05410;product=Ni/Fe-hydrogenase%2C b-type cytochrome subunit;protein_id=EIE27984.1;transl_table=11 AIHX01000157.1 Genbank gene 5182 6092 . - . ID=gene-HP17_05415;Name=HP17_05415;end_range=6092,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05415;partial=true AIHX01000157.1 Genbank CDS 5182 6092 . - 2 ID=cds-EIE27985.1;Parent=gene-HP17_05415;Dbxref=NCBI_GP:EIE27985.1;Name=EIE27985.1;Note=COG0374 Ni%2CFe-hydrogenase I large subunit;end_range=6092,.;gbkey=CDS;locus_tag=HP17_05415;partial=true;product=nickel-dependent hydrogenase%2C large subunit;protein_id=EIE27985.1;transl_table=11 ##sequence-region AIHX01000158.1 1 14916 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000158.1 Genbank region 1 14916 . + . ID=AIHX01000158.1:1..14916;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000158.1 Genbank gene 1 764 . - . ID=gene-HP17_05420;Name=HP17_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05420;partial=true;start_range=.,1 AIHX01000158.1 Genbank CDS 1 764 . - 0 ID=cds-EIE27956.1;Parent=gene-HP17_05420;Dbxref=NCBI_GP:EIE27956.1;Name=EIE27956.1;Note=COG0374 Ni%2CFe-hydrogenase I large subunit;gbkey=CDS;locus_tag=HP17_05420;partial=true;product=nickel-dependent hydrogenase%2C large subunit;protein_id=EIE27956.1;start_range=.,1;transl_table=11 AIHX01000158.1 Genbank gene 774 1928 . - . ID=gene-HP17_05425;Name=HP17_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05425 AIHX01000158.1 Genbank CDS 774 1928 . - 0 ID=cds-EIE27957.1;Parent=gene-HP17_05425;Dbxref=NCBI_GP:EIE27957.1;Name=EIE27957.1;Note=COG1740 Ni%2CFe-hydrogenase I small subunit;gbkey=CDS;locus_tag=HP17_05425;product=hydrogenase (NiFe) small subunit HydA;protein_id=EIE27957.1;transl_table=11 AIHX01000158.1 Genbank gene 2088 2672 . + . ID=gene-HP17_05430;Name=HP17_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05430 AIHX01000158.1 Genbank CDS 2088 2672 . + 0 ID=cds-EIE27958.1;Parent=gene-HP17_05430;Dbxref=NCBI_GP:EIE27958.1;Name=EIE27958.1;Note=COG2249 Putative NADPH-quinone reductase (modulator of drug activity B);gbkey=CDS;locus_tag=HP17_05430;product=modulator of drug activity;protein_id=EIE27958.1;transl_table=11 AIHX01000158.1 Genbank gene 4914 5972 . - . ID=gene-HP17_05445;Name=HP17_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05445 AIHX01000158.1 Genbank CDS 4914 5972 . - 0 ID=cds-EIE27959.1;Parent=gene-HP17_05445;Dbxref=NCBI_GP:EIE27959.1;Name=EIE27959.1;Note=COG0790 FOG: TPR repeat%2C SEL1 subfamily;gbkey=CDS;locus_tag=HP17_05445;product=cysteine-rich protein F;protein_id=EIE27959.1;transl_table=11 AIHX01000158.1 Genbank gene 5984 7189 . - . ID=gene-HP17_05450;Name=HP17_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05450 AIHX01000158.1 Genbank CDS 5984 7189 . - 0 ID=cds-EIE27960.1;Parent=gene-HP17_05450;Dbxref=NCBI_GP:EIE27960.1;Name=EIE27960.1;Note=COG2171 Tetrahydrodipicolinate N-succinyltransferase;gbkey=CDS;locus_tag=HP17_05450;product=tetrahydrodipicolinate N-succinyltransferase;protein_id=EIE27960.1;transl_table=11 AIHX01000158.1 Genbank gene 7192 8271 . - . ID=gene-HP17_05455;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HP17_05455 AIHX01000158.1 Genbank CDS 7192 8271 . - 0 ID=cds-EIE27961.1;Parent=gene-HP17_05455;Dbxref=NCBI_GP:EIE27961.1;Name=EIE27961.1;Note=COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis;gbkey=CDS;gene=ispG;locus_tag=HP17_05455;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=EIE27961.1;transl_table=11 AIHX01000158.1 Genbank gene 8391 9518 . + . ID=gene-HP17_05460;Name=HP17_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05460 AIHX01000158.1 Genbank CDS 8391 9518 . + 0 ID=cds-EIE27962.1;Parent=gene-HP17_05460;Dbxref=NCBI_GP:EIE27962.1;Name=EIE27962.1;Note=COG0436 Aspartate/tyrosine/aromatic aminotransferase;gbkey=CDS;locus_tag=HP17_05460;product=Hypothetical protein;protein_id=EIE27962.1;transl_table=11 AIHX01000158.1 Genbank gene 9511 10860 . + . ID=gene-HP17_05465;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HP17_05465 AIHX01000158.1 Genbank CDS 9511 10860 . + 0 ID=cds-EIE27963.1;Parent=gene-HP17_05465;Dbxref=NCBI_GP:EIE27963.1;Name=EIE27963.1;Note=COG0773 UDP-N-acetylmuramate-alanine ligase;gbkey=CDS;gene=murC;locus_tag=HP17_05465;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=EIE27963.1;transl_table=11 AIHX01000158.1 Genbank gene 10860 11237 . + . ID=gene-HP17_05470;Name=HP17_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05470 AIHX01000158.1 Genbank CDS 10860 11237 . + 0 ID=cds-EIE27964.1;Parent=gene-HP17_05470;Dbxref=NCBI_GP:EIE27964.1;Name=EIE27964.1;gbkey=CDS;locus_tag=HP17_05470;product=Hypothetical protein;protein_id=EIE27964.1;transl_table=11 AIHX01000158.1 Genbank gene 11244 13487 . + . ID=gene-HP17_05475;Name=HP17_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05475 AIHX01000158.1 Genbank CDS 11244 13487 . + 0 ID=cds-EIE27965.1;Parent=gene-HP17_05475;Dbxref=NCBI_GP:EIE27965.1;Name=EIE27965.1;Note=COG1193 Mismatch repair ATPase (MutS family);gbkey=CDS;locus_tag=HP17_05475;product=recombination and DNA strand exchange inhibitor protein;protein_id=EIE27965.1;transl_table=11 AIHX01000158.1 Genbank gene 13631 14152 . - . ID=gene-HP17_05480;Name=HP17_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05480 AIHX01000158.1 Genbank CDS 13631 14152 . - 0 ID=cds-EIE27966.1;Parent=gene-HP17_05480;Dbxref=NCBI_GP:EIE27966.1;Name=EIE27966.1;Note=COG0221 Inorganic pyrophosphatase;gbkey=CDS;locus_tag=HP17_05480;product=inorganic pyrophosphatase;protein_id=EIE27966.1;transl_table=11 AIHX01000158.1 Genbank gene 14204 14916 . - . ID=gene-HP17_05485;Name=HP17_05485;end_range=14916,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05485;partial=true AIHX01000158.1 Genbank CDS 14204 14916 . - 2 ID=cds-EIE27967.1;Parent=gene-HP17_05485;Dbxref=NCBI_GP:EIE27967.1;Name=EIE27967.1;end_range=14916,.;gbkey=CDS;locus_tag=HP17_05485;partial=true;product=family 25 glycosyl transferase;protein_id=EIE27967.1;transl_table=11 ##sequence-region AIHX01000159.1 1 15153 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000159.1 Genbank region 1 15153 . + . ID=AIHX01000159.1:1..15153;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000159.1 Genbank gene 1 529 . - . ID=gene-HP17_05490;Name=HP17_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05490;partial=true;start_range=.,1 AIHX01000159.1 Genbank CDS 1 529 . - 0 ID=cds-EIE27936.1;Parent=gene-HP17_05490;Dbxref=NCBI_GP:EIE27936.1;Name=EIE27936.1;Note=COG3306 Glycosyltransferase involved in LPS biosynthesis;gbkey=CDS;locus_tag=HP17_05490;partial=true;product=family 25 glycosyl transferase;protein_id=EIE27936.1;start_range=.,1;transl_table=11 AIHX01000159.1 Genbank gene 554 1129 . - . ID=gene-HP17_05495;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=HP17_05495 AIHX01000159.1 Genbank CDS 554 1129 . - 0 ID=cds-EIE27937.1;Parent=gene-HP17_05495;Dbxref=NCBI_GP:EIE27937.1;Name=EIE27937.1;Note=COG0563 Adenylate kinase and related kinases;gbkey=CDS;gene=adk;locus_tag=HP17_05495;product=adenylate kinase;protein_id=EIE27937.1;transl_table=11 AIHX01000159.1 Genbank gene 1146 2879 . - . ID=gene-HP17_05500;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=HP17_05500 AIHX01000159.1 Genbank CDS 1146 2879 . - 0 ID=cds-EIE27938.1;Parent=gene-HP17_05500;Dbxref=NCBI_GP:EIE27938.1;Name=EIE27938.1;Note=COG0173 Aspartyl-tRNA synthetase;gbkey=CDS;gene=aspS;locus_tag=HP17_05500;product=aspartyl-tRNA synthetase;protein_id=EIE27938.1;transl_table=11 AIHX01000159.1 Genbank gene 2914 3855 . - . ID=gene-HP17_05505;Name=HP17_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05505 AIHX01000159.1 Genbank CDS 2914 3855 . - 0 ID=cds-EIE27939.1;Parent=gene-HP17_05505;Dbxref=NCBI_GP:EIE27939.1;Name=EIE27939.1;Note=COG0835 Chemotaxis signal transduction protein;gbkey=CDS;locus_tag=HP17_05505;product=chemotaxis protein (cheV);protein_id=EIE27939.1;transl_table=11 AIHX01000159.1 Genbank gene 3933 5903 . + . ID=gene-HP17_05510;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=HP17_05510 AIHX01000159.1 Genbank CDS 3933 5903 . + 0 ID=cds-EIE27940.1;Parent=gene-HP17_05510;Dbxref=NCBI_GP:EIE27940.1;Name=EIE27940.1;Note=COG0272 NAD-dependent DNA ligase (contains BRCT domain type II);gbkey=CDS;gene=ligA;locus_tag=HP17_05510;product=NAD-dependent DNA ligase LigA;protein_id=EIE27940.1;transl_table=11 AIHX01000159.1 Genbank gene 6057 6389 . + . ID=gene-HP17_05515;Name=HP17_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05515 AIHX01000159.1 Genbank CDS 6057 6389 . + 0 ID=cds-EIE27941.1;Parent=gene-HP17_05515;Dbxref=NCBI_GP:EIE27941.1;Name=EIE27941.1;Note=COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain;gbkey=CDS;locus_tag=HP17_05515;product=Hypothetical protein;protein_id=EIE27941.1;transl_table=11 AIHX01000159.1 Genbank gene 6690 6926 . + . ID=gene-HP17_05520;Name=HP17_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05520 AIHX01000159.1 Genbank CDS 6690 6926 . + 0 ID=cds-EIE27942.1;Parent=gene-HP17_05520;Dbxref=NCBI_GP:EIE27942.1;Name=EIE27942.1;Note=COG1131 ABC-type multidrug transport system%2C ATPase component;gbkey=CDS;locus_tag=HP17_05520;product=ABC transporter%2C ATP-binding protein;protein_id=EIE27942.1;transl_table=11 AIHX01000159.1 Genbank gene 7385 7624 . + . ID=gene-HP17_05525;Name=HP17_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05525 AIHX01000159.1 Genbank CDS 7385 7624 . + 0 ID=cds-EIE27943.1;Parent=gene-HP17_05525;Dbxref=NCBI_GP:EIE27943.1;Name=EIE27943.1;Note=COG0842 ABC-type multidrug transport system%2C permease component;gbkey=CDS;locus_tag=HP17_05525;product=ABC transporter%2C permease;protein_id=EIE27943.1;transl_table=11 AIHX01000159.1 Genbank gene 7632 8141 . + . ID=gene-HP17_05530;Name=HP17_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05530 AIHX01000159.1 Genbank CDS 7632 8141 . + 0 ID=cds-EIE27944.1;Parent=gene-HP17_05530;Dbxref=NCBI_GP:EIE27944.1;Name=EIE27944.1;Note=COG0842 ABC-type multidrug transport system%2C permease component;gbkey=CDS;locus_tag=HP17_05530;product=putative ABC transporter permease;protein_id=EIE27944.1;transl_table=11 AIHX01000159.1 Genbank gene 8200 15153 . - . ID=gene-HP17_05535;Name=HP17_05535;end_range=15153,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05535;partial=true AIHX01000159.1 Genbank CDS 8200 15153 . - 0 ID=cds-EIE27945.1;Parent=gene-HP17_05535;Dbxref=NCBI_GP:EIE27945.1;Name=EIE27945.1;Note=COG0119 Isopropylmalate/homocitrate/citramalate synthases;end_range=15153,.;gbkey=CDS;locus_tag=HP17_05535;partial=true;product=putative vacuolating cytotoxin VacA;protein_id=EIE27945.1;transl_table=11 ##sequence-region AIHX01000160.1 1 917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000160.1 Genbank region 1 917 . + . ID=AIHX01000160.1:1..917;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000160.1 Genbank gene 1 917 . - . ID=gene-HP17_05540;Name=HP17_05540;end_range=917,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05540;partial=true;start_range=.,1 AIHX01000160.1 Genbank CDS 1 917 . - 0 ID=cds-EIE27922.1;Parent=gene-HP17_05540;Dbxref=NCBI_GP:EIE27922.1;Name=EIE27922.1;end_range=917,.;gbkey=CDS;locus_tag=HP17_05540;partial=true;product=putative vacuolating cytotoxin (VacA)-like protein;protein_id=EIE27922.1;start_range=.,1;transl_table=11 ##sequence-region AIHX01000161.1 1 9139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000161.1 Genbank region 1 9139 . + . ID=AIHX01000161.1:1..9139;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000161.1 Genbank gene 1 1659 . - . ID=gene-HP17_05545;Name=HP17_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05545;partial=true;start_range=.,1 AIHX01000161.1 Genbank CDS 1 1659 . - 0 ID=cds-EIE27910.1;Parent=gene-HP17_05545;Dbxref=NCBI_GP:EIE27910.1;Name=EIE27910.1;gbkey=CDS;locus_tag=HP17_05545;partial=true;product=vacuolating cytotoxin VacA-like protein;protein_id=EIE27910.1;start_range=.,1;transl_table=11 AIHX01000161.1 Genbank gene 1811 2380 . - . ID=gene-HP17_05550;Name=HP17_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05550 AIHX01000161.1 Genbank CDS 1811 2380 . - 0 ID=cds-EIE27911.1;Parent=gene-HP17_05550;Dbxref=NCBI_GP:EIE27911.1;Name=EIE27911.1;Note=COG0015 Adenylosuccinate lyase;gbkey=CDS;locus_tag=HP17_05550;product=Hypothetical protein;protein_id=EIE27911.1;transl_table=11 AIHX01000161.1 Genbank gene 2377 5457 . - . ID=gene-HP17_05555;Name=HP17_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05555 AIHX01000161.1 Genbank CDS 2377 5457 . - 0 ID=cds-EIE27912.1;Parent=gene-HP17_05555;Dbxref=NCBI_GP:EIE27912.1;Name=EIE27912.1;Note=COG0841 Cation/multidrug efflux pump;gbkey=CDS;locus_tag=HP17_05555;product=cytoplasmic pump protein of the hefABC efflux system HefC;protein_id=EIE27912.1;transl_table=11 AIHX01000161.1 Genbank gene 5470 6174 . - . ID=gene-HP17_05560;Name=HP17_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05560 AIHX01000161.1 Genbank CDS 5470 6174 . - 0 ID=cds-EIE27913.1;Parent=gene-HP17_05560;Dbxref=NCBI_GP:EIE27913.1;Name=EIE27913.1;Note=COG0845 Membrane-fusion protein;gbkey=CDS;locus_tag=HP17_05560;product=membrane fusion protein (mtrC);protein_id=EIE27913.1;transl_table=11 AIHX01000161.1 Genbank gene 6185 7618 . - . ID=gene-HP17_05565;Name=HP17_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05565 AIHX01000161.1 Genbank CDS 6185 7618 . - 0 ID=cds-EIE27914.1;Parent=gene-HP17_05565;Dbxref=NCBI_GP:EIE27914.1;Name=EIE27914.1;Note=COG1538 Outer membrane protein;gbkey=CDS;locus_tag=HP17_05565;product=outer-membrane protein of the hefABC efflux system;protein_id=EIE27914.1;transl_table=11 AIHX01000161.1 Genbank pseudogene 7627 8782 . - . ID=gene-HP17_05570;Name=hemE;Note=note nonfunctional due to frameshift;gbkey=Gene;gene=hemE;gene_biotype=pseudogene;locus_tag=HP17_05570;pseudo=true AIHX01000161.1 Genbank sequence_feature 7627 8782 . - . ID=id-HP17_05570;Note=potential frameshift;gbkey=misc_feature;gene=hemE;locus_tag=HP17_05570;pseudo=true AIHX01000161.1 Genbank gene 8851 9139 . - . ID=gene-HP17_05580;Name=HP17_05580;end_range=9139,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05580;partial=true AIHX01000161.1 Genbank CDS 8851 9139 . - 1 ID=cds-EIE27915.1;Parent=gene-HP17_05580;Dbxref=NCBI_GP:EIE27915.1;Name=EIE27915.1;end_range=9139,.;gbkey=CDS;locus_tag=HP17_05580;partial=true;product=Hypothetical protein;protein_id=EIE27915.1;transl_table=11 ##sequence-region AIHX01000162.1 1 1128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000162.1 Genbank region 1 1128 . + . ID=AIHX01000162.1:1..1128;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000162.1 Genbank gene 1 309 . - . ID=gene-HP17_05585;Name=HP17_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05585;partial=true;start_range=.,1 AIHX01000162.1 Genbank CDS 1 309 . - 0 ID=cds-EIE27904.1;Parent=gene-HP17_05585;Dbxref=NCBI_GP:EIE27904.1;Name=EIE27904.1;gbkey=CDS;locus_tag=HP17_05585;partial=true;product=Hypothetical protein;protein_id=EIE27904.1;start_range=.,1;transl_table=11 AIHX01000162.1 Genbank gene 306 962 . - . ID=gene-HP17_05590;Name=HP17_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05590 AIHX01000162.1 Genbank CDS 306 962 . - 0 ID=cds-EIE27905.1;Parent=gene-HP17_05590;Dbxref=NCBI_GP:EIE27905.1;Name=EIE27905.1;Note=COG2231 Uncharacterized protein related to Endonuclease III;gbkey=CDS;locus_tag=HP17_05590;product=3-methyladenine DNA glycosylase;protein_id=EIE27905.1;transl_table=11 ##sequence-region AIHX01000163.1 1 49615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=102618 AIHX01000163.1 Genbank region 1 49615 . + . ID=AIHX01000163.1:1..49615;Dbxref=taxon:102618;country=Australia;culture-collection=CCUG:17874;gbkey=Src;isolation-source=gastric antrum sample from patient;mol_type=genomic DNA;nat-host=Homo sapiens;old-name=Helicobacter pylori CCUG 17874;strain=CCUG 17874;type-material=type strain of Helicobacter pylori AIHX01000163.1 Genbank gene 1 1458 . - . ID=gene-HP17_05595;Name=HP17_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05595;partial=true;start_range=.,1 AIHX01000163.1 Genbank CDS 1 1458 . - 0 ID=cds-EIE27846.1;Parent=gene-HP17_05595;Dbxref=NCBI_GP:EIE27846.1;Name=EIE27846.1;Note=COG1344 Flagellin and related hook-associated proteins;gbkey=CDS;locus_tag=HP17_05595;partial=true;product=flagellin A;protein_id=EIE27846.1;start_range=.,1;transl_table=11 AIHX01000163.1 Genbank gene 1872 2516 . + . ID=gene-HP17_05600;Name=HP17_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05600 AIHX01000163.1 Genbank CDS 1872 2516 . + 0 ID=cds-EIE27847.1;Parent=gene-HP17_05600;Dbxref=NCBI_GP:EIE27847.1;Name=EIE27847.1;Note=COG1132 ABC-type multidrug transport system%2C ATPase and permease components;gbkey=CDS;locus_tag=HP17_05600;product=multidrug resistance protein SpaB;protein_id=EIE27847.1;transl_table=11 AIHX01000163.1 Genbank gene 2482 3396 . + . ID=gene-HP17_05605;Name=HP17_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05605 AIHX01000163.1 Genbank CDS 2482 3396 . + 0 ID=cds-EIE27848.1;Parent=gene-HP17_05605;Dbxref=NCBI_GP:EIE27848.1;Name=EIE27848.1;Note=COG1132 ABC-type multidrug transport system%2C ATPase and permease components;gbkey=CDS;locus_tag=HP17_05605;product=ABC-type transport system%2C permease and ATP-binding protein;protein_id=EIE27848.1;transl_table=11 AIHX01000163.1 Genbank gene 3467 4768 . + . ID=gene-HP17_05610;Name=HP17_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05610 AIHX01000163.1 Genbank CDS 3467 4768 . + 0 ID=cds-EIE27849.1;Parent=gene-HP17_05610;Dbxref=NCBI_GP:EIE27849.1;Name=EIE27849.1;Note=COG0840 Methyl-accepting chemotaxis protein;gbkey=CDS;locus_tag=HP17_05610;product=methyl-accepting chemotaxis transmembrane sensory protein (MCP-like protein);protein_id=EIE27849.1;transl_table=11 AIHX01000163.1 Genbank gene 4791 5912 . + . ID=gene-HP17_05615;Name=HP17_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05615 AIHX01000163.1 Genbank CDS 4791 5912 . + 0 ID=cds-EIE27850.1;Parent=gene-HP17_05615;Dbxref=NCBI_GP:EIE27850.1;Name=EIE27850.1;Note=COG0156 7-keto-8-aminopelargonate synthetase and related enzymes;gbkey=CDS;locus_tag=HP17_05615;product=8-amino-7-oxononanoate synthase;protein_id=EIE27850.1;transl_table=11 AIHX01000163.1 Genbank gene 5913 7892 . + . ID=gene-HP17_05620;Name=HP17_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05620 AIHX01000163.1 Genbank CDS 5913 7892 . + 0 ID=cds-EIE27851.1;Parent=gene-HP17_05620;Dbxref=NCBI_GP:EIE27851.1;Name=EIE27851.1;Note=COG0744 Membrane carboxypeptidase (penicillin-binding protein);gbkey=CDS;locus_tag=HP17_05620;product=penicillin-binding protein 1A (PBP-1A);protein_id=EIE27851.1;transl_table=11 AIHX01000163.1 Genbank gene 7895 8473 . - . ID=gene-HP17_05625;Name=HP17_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05625 AIHX01000163.1 Genbank CDS 7895 8473 . - 0 ID=cds-EIE27852.1;Parent=gene-HP17_05625;Dbxref=NCBI_GP:EIE27852.1;Name=EIE27852.1;gbkey=CDS;locus_tag=HP17_05625;product=tumor necrosis factor alpha-inducing protein;protein_id=EIE27852.1;transl_table=11 AIHX01000163.1 Genbank gene 8631 8750 . + . ID=gene-HP17_05630;Name=HP17_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05630 AIHX01000163.1 Genbank CDS 8631 8750 . + 0 ID=cds-EIE27853.1;Parent=gene-HP17_05630;Dbxref=NCBI_GP:EIE27853.1;Name=EIE27853.1;Note=not present in 26695~not present in J99;gbkey=CDS;locus_tag=HP17_05630;product=Hypothetical protein;protein_id=EIE27853.1;transl_table=11 AIHX01000163.1 Genbank gene 8948 10420 . - . ID=gene-HP17_05635;Name=HP17_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05635 AIHX01000163.1 Genbank CDS 8948 10420 . - 0 ID=cds-EIE27854.1;Parent=gene-HP17_05635;Dbxref=NCBI_GP:EIE27854.1;Name=EIE27854.1;Note=COG1495 Disulfide bond formation protein DsbB;gbkey=CDS;locus_tag=HP17_05635;product=dsbb-like protein;protein_id=EIE27854.1;transl_table=11 AIHX01000163.1 Genbank gene 10429 10593 . - . ID=gene-HP17_05640;Name=HP17_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05640 AIHX01000163.1 Genbank CDS 10429 10593 . - 0 ID=cds-EIE27855.1;Parent=gene-HP17_05640;Dbxref=NCBI_GP:EIE27855.1;Name=EIE27855.1;gbkey=CDS;locus_tag=HP17_05640;product=Hypothetical protein;protein_id=EIE27855.1;transl_table=11 AIHX01000163.1 Genbank gene 10696 12624 . - . ID=gene-HP17_05645;Name=HP17_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05645 AIHX01000163.1 Genbank CDS 10696 12624 . - 0 ID=cds-EIE27856.1;Parent=gene-HP17_05645;Dbxref=NCBI_GP:EIE27856.1;Name=EIE27856.1;Note=COG2189 Adenine specific DNA methylase Mod;gbkey=CDS;locus_tag=HP17_05645;product=adenine specific DNA methyltransferase;protein_id=EIE27856.1;transl_table=11 AIHX01000163.1 Genbank gene 12621 15563 . - . ID=gene-HP17_05650;Name=HP17_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05650 AIHX01000163.1 Genbank CDS 12621 15563 . - 0 ID=cds-EIE27857.1;Parent=gene-HP17_05650;Dbxref=NCBI_GP:EIE27857.1;Name=EIE27857.1;Note=COG3587 Restriction endonuclease;gbkey=CDS;locus_tag=HP17_05650;product=type III restriction enzyme R protein (Res);protein_id=EIE27857.1;transl_table=11 AIHX01000163.1 Genbank gene 15739 16299 . - . ID=gene-HP17_05655;Name=oorC;gbkey=Gene;gene=oorC;gene_biotype=protein_coding;locus_tag=HP17_05655 AIHX01000163.1 Genbank CDS 15739 16299 . - 0 ID=cds-EIE27858.1;Parent=gene-HP17_05655;Dbxref=NCBI_GP:EIE27858.1;Name=EIE27858.1;Note=COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C gamma subunit;gbkey=CDS;gene=oorC;locus_tag=HP17_05655;product=2-oxoglutarate-acceptor oxidoreductase subunit OorC;protein_id=EIE27858.1;transl_table=11 AIHX01000163.1 Genbank gene 16299 17120 . - . ID=gene-HP17_05660;Name=oorB;gbkey=Gene;gene=oorB;gene_biotype=protein_coding;locus_tag=HP17_05660 AIHX01000163.1 Genbank CDS 16299 17120 . - 0 ID=cds-EIE27859.1;Parent=gene-HP17_05660;Dbxref=NCBI_GP:EIE27859.1;Name=EIE27859.1;Note=COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C beta subunit;gbkey=CDS;gene=oorB;locus_tag=HP17_05660;product=2-oxoglutarate-acceptor oxidoreductase subunit OorB;protein_id=EIE27859.1;transl_table=11 AIHX01000163.1 Genbank gene 17122 18249 . - . ID=gene-HP17_05665;Name=oorA;gbkey=Gene;gene=oorA;gene_biotype=protein_coding;locus_tag=HP17_05665 AIHX01000163.1 Genbank CDS 17122 18249 . - 0 ID=cds-EIE27860.1;Parent=gene-HP17_05665;Dbxref=NCBI_GP:EIE27860.1;Name=EIE27860.1;Note=COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases%2C alpha subunit;gbkey=CDS;gene=oorA;locus_tag=HP17_05665;product=2-oxoglutarate-acceptor oxidoreductase subunit OorA;protein_id=EIE27860.1;transl_table=11 AIHX01000163.1 Genbank gene 18249 18590 . - . ID=gene-HP17_05670;Name=oorD;gbkey=Gene;gene=oorD;gene_biotype=protein_coding;locus_tag=HP17_05670 AIHX01000163.1 Genbank CDS 18249 18590 . - 0 ID=cds-EIE27861.1;Parent=gene-HP17_05670;Dbxref=NCBI_GP:EIE27861.1;Name=EIE27861.1;Note=COG1146 Ferredoxin;gbkey=CDS;gene=oorD;locus_tag=HP17_05670;product=2-oxoglutarate-acceptor oxidoreductase subunit OorD;protein_id=EIE27861.1;transl_table=11 AIHX01000163.1 Genbank gene 18775 19764 . - . ID=gene-HP17_05675;Name=HP17_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05675 AIHX01000163.1 Genbank CDS 18775 19764 . - 0 ID=cds-EIE27862.1;Parent=gene-HP17_05675;Dbxref=NCBI_GP:EIE27862.1;Name=EIE27862.1;Note=COG1559 Predicted periplasmic solute-binding protein;gbkey=CDS;locus_tag=HP17_05675;product=aminodeoxychorismate lyase (pabC);protein_id=EIE27862.1;transl_table=11 AIHX01000163.1 Genbank gene 19682 22615 . + . ID=gene-HP17_05680;Name=HP17_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05680 AIHX01000163.1 Genbank CDS 19682 22615 . + 0 ID=cds-EIE27863.1;Parent=gene-HP17_05680;Dbxref=NCBI_GP:EIE27863.1;Name=EIE27863.1;gbkey=CDS;locus_tag=HP17_05680;product=Hypothetical protein;protein_id=EIE27863.1;transl_table=11 AIHX01000163.1 Genbank gene 22617 22847 . + . ID=gene-HP17_05685;Name=HP17_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05685 AIHX01000163.1 Genbank CDS 22617 22847 . + 0 ID=cds-EIE27864.1;Parent=gene-HP17_05685;Dbxref=NCBI_GP:EIE27864.1;Name=EIE27864.1;Note=COG1918 Fe2+ transport system protein A;gbkey=CDS;locus_tag=HP17_05685;product=ferrous iron transport protein A;protein_id=EIE27864.1;transl_table=11 AIHX01000163.1 Genbank gene 22849 23493 . + . ID=gene-HP17_05690;Name=HP17_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05690 AIHX01000163.1 Genbank CDS 22849 23493 . + 0 ID=cds-EIE27865.1;Parent=gene-HP17_05690;Dbxref=NCBI_GP:EIE27865.1;Name=EIE27865.1;Note=COG0177 Predicted EndoIII-related endonuclease;gbkey=CDS;locus_tag=HP17_05690;product=endonuclease III;protein_id=EIE27865.1;transl_table=11 AIHX01000163.1 Genbank gene 23575 23946 . + . ID=gene-HP17_05695;Name=HP17_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05695 AIHX01000163.1 Genbank CDS 23575 23946 . + 0 ID=cds-EIE27866.1;Parent=gene-HP17_05695;Dbxref=NCBI_GP:EIE27866.1;Name=EIE27866.1;Note=COG1886 Flagellar motor switch/type III secretory pathway protein;gbkey=CDS;locus_tag=HP17_05695;product=flagellar motor switch protein (fliN);protein_id=EIE27866.1;transl_table=11 AIHX01000163.1 Genbank gene 24822 25796 . + . ID=gene-HP17_05710;Name=HP17_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05710 AIHX01000163.1 Genbank CDS 24822 25796 . + 0 ID=cds-EIE27867.1;Parent=gene-HP17_05710;Dbxref=NCBI_GP:EIE27867.1;Name=EIE27867.1;Note=COG0810 Periplasmic protein TonB%2C links inner and outer membranes;gbkey=CDS;locus_tag=HP17_05710;product=siderophore-mediated iron transport protein;protein_id=EIE27867.1;transl_table=11 AIHX01000163.1 Genbank gene 25800 26819 . + . ID=gene-HP17_05715;Name=HP17_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05715 AIHX01000163.1 Genbank CDS 25800 26819 . + 0 ID=cds-EIE27868.1;Parent=gene-HP17_05715;Dbxref=NCBI_GP:EIE27868.1;Name=EIE27868.1;Note=COG0418 Dihydroorotase;gbkey=CDS;locus_tag=HP17_05715;product=dihydroorotase;protein_id=EIE27868.1;transl_table=11 AIHX01000163.1 Genbank gene 26795 27913 . + . ID=gene-HP17_05720;Name=HP17_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05720 AIHX01000163.1 Genbank CDS 26795 27913 . + 0 ID=cds-EIE27869.1;Parent=gene-HP17_05720;Dbxref=NCBI_GP:EIE27869.1;Name=EIE27869.1;Note=COG4692 Predicted neuraminidase (sialidase);gbkey=CDS;locus_tag=HP17_05720;product=Hypothetical protein;protein_id=EIE27869.1;transl_table=11 AIHX01000163.1 Genbank gene 27920 28474 . + . ID=gene-HP17_05725;Name=HP17_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05725 AIHX01000163.1 Genbank CDS 27920 28474 . + 0 ID=cds-EIE27870.1;Parent=gene-HP17_05725;Dbxref=NCBI_GP:EIE27870.1;Name=EIE27870.1;gbkey=CDS;locus_tag=HP17_05725;product=Hypothetical protein;protein_id=EIE27870.1;transl_table=11 AIHX01000163.1 Genbank gene 28480 30531 . + . ID=gene-HP17_05730;Name=HP17_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05730 AIHX01000163.1 Genbank CDS 28480 30531 . + 0 ID=cds-EIE27871.1;Parent=gene-HP17_05730;Dbxref=NCBI_GP:EIE27871.1;Name=EIE27871.1;Note=COG1368 Phosphoglycerol transferase and related proteins%2C alkaline phosphatase superfamily;gbkey=CDS;locus_tag=HP17_05730;product=Hypothetical protein;protein_id=EIE27871.1;transl_table=11 AIHX01000163.1 Genbank gene 30612 31484 . + . ID=gene-HP17_05735;Name=HP17_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05735 AIHX01000163.1 Genbank CDS 30612 31484 . + 0 ID=cds-EIE27872.1;Parent=gene-HP17_05735;Dbxref=NCBI_GP:EIE27872.1;Name=EIE27872.1;Note=COG0190 5%2C10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase;gbkey=CDS;locus_tag=HP17_05735;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=EIE27872.1;transl_table=11 AIHX01000163.1 Genbank gene 31484 32356 . + . ID=gene-HP17_05740;Name=HP17_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05740 AIHX01000163.1 Genbank CDS 31484 32356 . + 0 ID=cds-EIE27873.1;Parent=gene-HP17_05740;Dbxref=NCBI_GP:EIE27873.1;Name=EIE27873.1;Note=COG0681 Signal peptidase I;gbkey=CDS;locus_tag=HP17_05740;product=signal peptidase I (lepB);protein_id=EIE27873.1;transl_table=11 AIHX01000163.1 Genbank gene 32365 33063 . + . ID=gene-HP17_05745;Name=HP17_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05745 AIHX01000163.1 Genbank CDS 32365 33063 . + 0 ID=cds-EIE27874.1;Parent=gene-HP17_05745;Dbxref=NCBI_GP:EIE27874.1;Name=EIE27874.1;Note=COG1994 Zn-dependent proteases;gbkey=CDS;locus_tag=HP17_05745;product=Hypothetical protein;protein_id=EIE27874.1;transl_table=11 AIHX01000163.1 Genbank gene 33084 33545 . + . ID=gene-HP17_05750;Name=HP17_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05750 AIHX01000163.1 Genbank CDS 33084 33545 . + 0 ID=cds-EIE27875.1;Parent=gene-HP17_05750;Dbxref=NCBI_GP:EIE27875.1;Name=EIE27875.1;Note=COG0698 Ribose 5-phosphate isomerase RpiB;gbkey=CDS;locus_tag=HP17_05750;product=ribose-5-phosphate isomerase B;protein_id=EIE27875.1;transl_table=11 AIHX01000163.1 Genbank gene 33590 33922 . + . ID=gene-HP17_05755;Name=HP17_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05755 AIHX01000163.1 Genbank CDS 33590 33922 . + 0 ID=cds-EIE27876.1;Parent=gene-HP17_05755;Dbxref=NCBI_GP:EIE27876.1;Name=EIE27876.1;gbkey=CDS;locus_tag=HP17_05755;product=Hypothetical protein;protein_id=EIE27876.1;transl_table=11 AIHX01000163.1 Genbank gene 33980 34519 . + . ID=gene-HP17_05760;Name=HP17_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05760 AIHX01000163.1 Genbank CDS 33980 34519 . + 0 ID=cds-EIE27877.1;Parent=gene-HP17_05760;Dbxref=NCBI_GP:EIE27877.1;Name=EIE27877.1;Note=COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins;gbkey=CDS;locus_tag=HP17_05760;product=adenine phosphoribosyltransferase;protein_id=EIE27877.1;transl_table=11 AIHX01000163.1 Genbank gene 34534 35112 . + . ID=gene-HP17_05765;Name=HP17_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05765 AIHX01000163.1 Genbank CDS 34534 35112 . + 0 ID=cds-EIE27878.1;Parent=gene-HP17_05765;Dbxref=NCBI_GP:EIE27878.1;Name=EIE27878.1;Note=COG0586 Uncharacterized membrane-associated protein;gbkey=CDS;locus_tag=HP17_05765;product=Hypothetical protein;protein_id=EIE27878.1;transl_table=11 AIHX01000163.1 Genbank gene 35160 36650 . + . ID=gene-HP17_05770;Name=HP17_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05770 AIHX01000163.1 Genbank CDS 35160 36650 . + 0 ID=cds-EIE27879.1;Parent=gene-HP17_05770;Dbxref=NCBI_GP:EIE27879.1;Name=EIE27879.1;Note=COG0260 Leucyl aminopeptidase;gbkey=CDS;locus_tag=HP17_05770;product=multifunctional aminopeptidase A;protein_id=EIE27879.1;transl_table=11 AIHX01000163.1 Genbank gene 36652 37752 . + . ID=gene-HP17_05775;Name=HP17_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05775 AIHX01000163.1 Genbank CDS 36652 37752 . + 0 ID=cds-EIE27880.1;Parent=gene-HP17_05775;Dbxref=NCBI_GP:EIE27880.1;Name=EIE27880.1;Note=COG0012 Predicted GTPase%2C putative translation factor;gbkey=CDS;locus_tag=HP17_05775;product=GTP-binding protein YchF;protein_id=EIE27880.1;transl_table=11 AIHX01000163.1 Genbank gene 37896 38663 . + . ID=gene-HP17_05780;Name=HP17_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05780 AIHX01000163.1 Genbank CDS 37896 38663 . + 0 ID=cds-EIE27881.1;Parent=gene-HP17_05780;Dbxref=NCBI_GP:EIE27881.1;Name=EIE27881.1;Note=COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase;gbkey=CDS;locus_tag=HP17_05780;product=Hypothetical protein;protein_id=EIE27881.1;transl_table=11 AIHX01000163.1 Genbank gene 38795 39841 . - . ID=gene-HP17_05785;Name=HP17_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05785 AIHX01000163.1 Genbank CDS 38795 39841 . - 0 ID=cds-EIE27882.1;Parent=gene-HP17_05785;Dbxref=NCBI_GP:EIE27882.1;Name=EIE27882.1;Note=COG0628 Predicted permease;gbkey=CDS;locus_tag=HP17_05785;product=outer membrane protein;protein_id=EIE27882.1;transl_table=11 AIHX01000163.1 Genbank gene 39957 40775 . + . ID=gene-HP17_05790;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HP17_05790 AIHX01000163.1 Genbank CDS 39957 40775 . + 0 ID=cds-EIE27883.1;Parent=gene-HP17_05790;Dbxref=NCBI_GP:EIE27883.1;Name=EIE27883.1;Note=COG0253 Diaminopimelate epimerase;gbkey=CDS;gene=dapF;locus_tag=HP17_05790;product=diaminopimelate epimerase;protein_id=EIE27883.1;transl_table=11 AIHX01000163.1 Genbank gene 40882 41529 . + . ID=gene-HP17_05795;Name=HP17_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05795 AIHX01000163.1 Genbank CDS 40882 41529 . + 0 ID=cds-EIE27884.1;Parent=gene-HP17_05795;Dbxref=NCBI_GP:EIE27884.1;Name=EIE27884.1;Note=COG3059 Predicted membrane protein;gbkey=CDS;locus_tag=HP17_05795;product=Hypothetical protein;protein_id=EIE27884.1;transl_table=11 AIHX01000163.1 Genbank gene 41553 41795 . - . ID=gene-HP17_05800;Name=HP17_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05800 AIHX01000163.1 Genbank CDS 41553 41795 . - 0 ID=cds-EIE27885.1;Parent=gene-HP17_05800;Dbxref=NCBI_GP:EIE27885.1;Name=EIE27885.1;gbkey=CDS;locus_tag=HP17_05800;product=Hypothetical protein;protein_id=EIE27885.1;transl_table=11 AIHX01000163.1 Genbank gene 41968 43218 . + . ID=gene-HP17_05805;Name=HP17_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05805 AIHX01000163.1 Genbank CDS 41968 43218 . + 0 ID=cds-EIE27886.1;Parent=gene-HP17_05805;Dbxref=NCBI_GP:EIE27886.1;Name=EIE27886.1;gbkey=CDS;locus_tag=HP17_05805;product=Hypothetical protein;protein_id=EIE27886.1;transl_table=11 AIHX01000163.1 Genbank gene 43319 43531 . + . ID=gene-HP17_05810;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=HP17_05810 AIHX01000163.1 Genbank CDS 43319 43531 . + 0 ID=cds-EIE27887.1;Parent=gene-HP17_05810;Dbxref=NCBI_GP:EIE27887.1;Name=EIE27887.1;Note=COG0828 Ribosomal protein S21;gbkey=CDS;gene=rpsU;locus_tag=HP17_05810;product=30S ribosomal protein S21;protein_id=EIE27887.1;transl_table=11 AIHX01000163.1 Genbank gene 43573 44316 . + . ID=gene-HP17_05815;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HP17_05815 AIHX01000163.1 Genbank CDS 43573 44316 . + 0 ID=cds-EIE27888.1;Parent=gene-HP17_05815;Dbxref=NCBI_GP:EIE27888.1;Name=EIE27888.1;Note=COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases);gbkey=CDS;gene=fabG;locus_tag=HP17_05815;product=3-ketoacyl-(acyl-carrier-protein) reductase;protein_id=EIE27888.1;transl_table=11 AIHX01000163.1 Genbank gene 44547 44783 . + . ID=gene-HP17_05820;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=HP17_05820 AIHX01000163.1 Genbank CDS 44547 44783 . + 0 ID=cds-EIE27889.1;Parent=gene-HP17_05820;Dbxref=NCBI_GP:EIE27889.1;Name=EIE27889.1;Note=COG0236 Acyl carrier protein;gbkey=CDS;gene=acpP;locus_tag=HP17_05820;product=acyl carrier protein;protein_id=EIE27889.1;transl_table=11 AIHX01000163.1 Genbank gene 44967 45074 . + . ID=gene-HP17_05825;Name=HP17_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05825 AIHX01000163.1 Genbank CDS 44967 45074 . + 0 ID=cds-EIE27890.1;Parent=gene-HP17_05825;Dbxref=NCBI_GP:EIE27890.1;Name=EIE27890.1;Note=not present in J99~not present in P79;gbkey=CDS;locus_tag=HP17_05825;product=Hypothetical protein;protein_id=EIE27890.1;transl_table=11 AIHX01000163.1 Genbank gene 45090 46328 . + . ID=gene-HP17_05830;Name=HP17_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05830 AIHX01000163.1 Genbank CDS 45090 46328 . + 0 ID=cds-EIE27891.1;Parent=gene-HP17_05830;Dbxref=NCBI_GP:EIE27891.1;Name=EIE27891.1;Note=COG0304 3-oxoacyl-(acyl-carrier-protein) synthase;gbkey=CDS;locus_tag=HP17_05830;product=3-oxoacyl-(acyl carrier protein) synthase II;protein_id=EIE27891.1;transl_table=11 AIHX01000163.1 Genbank gene 46351 47289 . + . ID=gene-HP17_05835;Name=HP17_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05835 AIHX01000163.1 Genbank CDS 46351 47289 . + 0 ID=cds-EIE27892.1;Parent=gene-HP17_05835;Dbxref=NCBI_GP:EIE27892.1;Name=EIE27892.1;Note=COG0825 Acetyl-CoA carboxylase alpha subunit;gbkey=CDS;locus_tag=HP17_05835;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=EIE27892.1;transl_table=11 AIHX01000163.1 Genbank gene 47716 48153 . + . ID=gene-HP17_05840;Name=HP17_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05840 AIHX01000163.1 Genbank CDS 47716 48153 . + 0 ID=cds-EIE27893.1;Parent=gene-HP17_05840;Dbxref=NCBI_GP:EIE27893.1;Name=EIE27893.1;gbkey=CDS;locus_tag=HP17_05840;product=Hypothetical protein;protein_id=EIE27893.1;transl_table=11 AIHX01000163.1 Genbank gene 48223 49044 . - . ID=gene-HP17_05845;Name=HP17_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HP17_05845 AIHX01000163.1 Genbank CDS 48223 49044 . - 0 ID=cds-EIE27894.1;Parent=gene-HP17_05845;Dbxref=NCBI_GP:EIE27894.1;Name=EIE27894.1;Note=COG1217 Predicted membrane GTPase involved in stress response;gbkey=CDS;locus_tag=HP17_05845;product=Hypothetical protein;protein_id=EIE27894.1;transl_table=11 AIHX01000163.1 Genbank pseudogene 49041 49615 . - . ID=gene-HP17_05850;Name=HP17_05850;Note=nonfunctional due to frameshift;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HP17_05850;pseudo=true AIHX01000163.1 Genbank sequence_feature 49041 49615 . - . ID=id-HP17_05850;Note=potential frameshift: common BLAST hit: gi|298736243|ref|YP_003728769.1| sialidase A;gbkey=misc_feature;locus_tag=HP17_05850;pseudo=true ###