##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM180773v1 #!genome-build-accession NCBI_Assembly:GCA_001807735.1 #!annotation-date 04/22/2016 15:14:49 #!annotation-source NCBI ##sequence-region KV790750.1 1 32309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790750.1 Genbank region 1 32309 . + . ID=KV790750.1:1..32309;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790750.1 Genbank gene 77 766 . - . ID=gene-HMPREF3107_00005;Name=HMPREF3107_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00005 KV790750.1 Protein Homology CDS 77 766 . - 0 ID=cds-OFT04554.1;Parent=gene-HMPREF3107_00005;Dbxref=NCBI_GP:OFT04554.1;Name=OFT04554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285640.1;locus_tag=HMPREF3107_00005;product=mannose-1-phosphate guanylyltransferase;protein_id=OFT04554.1;transl_table=11 KV790750.1 Genbank gene 910 2274 . - . ID=gene-HMPREF3107_00010;Name=HMPREF3107_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00010 KV790750.1 Protein Homology CDS 910 2274 . - 0 ID=cds-OFT04555.1;Parent=gene-HMPREF3107_00010;Dbxref=NCBI_GP:OFT04555.1;Name=OFT04555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779690.1;locus_tag=HMPREF3107_00010;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis GTPase MnmE;protein_id=OFT04555.1;transl_table=11 KV790750.1 Genbank gene 2504 5929 . - . ID=gene-HMPREF3107_00015;Name=HMPREF3107_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00015 KV790750.1 Protein Homology CDS 2504 5929 . - 0 ID=cds-OFT04556.1;Parent=gene-HMPREF3107_00015;Dbxref=NCBI_GP:OFT04556.1;Name=OFT04556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574209.1;locus_tag=HMPREF3107_00015;product=DNA polymerase III subunit alpha;protein_id=OFT04556.1;transl_table=11 KV790750.1 Genbank gene 6072 6374 . - . ID=gene-HMPREF3107_00020;Name=HMPREF3107_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00020 KV790750.1 Protein Homology CDS 6072 6374 . - 0 ID=cds-OFT04580.1;Parent=gene-HMPREF3107_00020;Dbxref=NCBI_GP:OFT04580.1;Name=OFT04580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746310.1;locus_tag=HMPREF3107_00020;product=transcriptional regulator;protein_id=OFT04580.1;transl_table=11 KV790750.1 Genbank gene 6461 6982 . - . ID=gene-HMPREF3107_00025;Name=HMPREF3107_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00025 KV790750.1 Protein Homology CDS 6461 6982 . - 0 ID=cds-OFT04557.1;Parent=gene-HMPREF3107_00025;Dbxref=NCBI_GP:OFT04557.1;Name=OFT04557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688074.1;locus_tag=HMPREF3107_00025;product=hypothetical protein;protein_id=OFT04557.1;transl_table=11 KV790750.1 Genbank gene 6995 7189 . - . ID=gene-HMPREF3107_00030;Name=HMPREF3107_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00030 KV790750.1 Protein Homology CDS 6995 7189 . - 0 ID=cds-OFT04558.1;Parent=gene-HMPREF3107_00030;Dbxref=NCBI_GP:OFT04558.1;Name=OFT04558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746314.1;locus_tag=HMPREF3107_00030;product=hypothetical protein;protein_id=OFT04558.1;transl_table=11 KV790750.1 Genbank gene 7456 7692 . + . ID=gene-HMPREF3107_00035;Name=HMPREF3107_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00035 KV790750.1 Protein Homology CDS 7456 7692 . + 0 ID=cds-OFT04559.1;Parent=gene-HMPREF3107_00035;Dbxref=NCBI_GP:OFT04559.1;Name=OFT04559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775393.1;locus_tag=HMPREF3107_00035;product=RNA-binding protein;protein_id=OFT04559.1;transl_table=11 KV790750.1 Genbank gene 7667 7852 . + . ID=gene-HMPREF3107_00040;Name=HMPREF3107_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00040 KV790750.1 Protein Homology CDS 7667 7852 . + 0 ID=cds-OFT04560.1;Parent=gene-HMPREF3107_00040;Dbxref=NCBI_GP:OFT04560.1;Name=OFT04560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285489.1;locus_tag=HMPREF3107_00040;product=hypothetical protein;protein_id=OFT04560.1;transl_table=11 KV790750.1 Genbank gene 8018 8935 . + . ID=gene-HMPREF3107_00045;Name=HMPREF3107_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00045 KV790750.1 Protein Homology CDS 8018 8935 . + 0 ID=cds-OFT04561.1;Parent=gene-HMPREF3107_00045;Dbxref=NCBI_GP:OFT04561.1;Name=OFT04561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775395.1;locus_tag=HMPREF3107_00045;product=fatty acid desaturase;protein_id=OFT04561.1;transl_table=11 KV790750.1 Genbank gene 8932 10533 . + . ID=gene-HMPREF3107_00050;Name=HMPREF3107_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00050 KV790750.1 Protein Homology CDS 8932 10533 . + 0 ID=cds-OFT04562.1;Parent=gene-HMPREF3107_00050;Dbxref=NCBI_GP:OFT04562.1;Name=OFT04562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775396.1;locus_tag=HMPREF3107_00050;product=phosphoesterase;protein_id=OFT04562.1;transl_table=11 KV790750.1 Genbank gene 10809 11594 . + . ID=gene-HMPREF3107_00055;Name=HMPREF3107_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00055 KV790750.1 Protein Homology CDS 10809 11594 . + 0 ID=cds-OFT04563.1;Parent=gene-HMPREF3107_00055;Dbxref=NCBI_GP:OFT04563.1;Name=OFT04563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519214.1;locus_tag=HMPREF3107_00055;product=methyltransferase;protein_id=OFT04563.1;transl_table=11 KV790750.1 Genbank gene 11692 12585 . + . ID=gene-HMPREF3107_00060;Name=HMPREF3107_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00060 KV790750.1 Protein Homology CDS 11692 12585 . + 0 ID=cds-OFT04564.1;Parent=gene-HMPREF3107_00060;Dbxref=NCBI_GP:OFT04564.1;Name=OFT04564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240132.1;locus_tag=HMPREF3107_00060;product=esterase;protein_id=OFT04564.1;transl_table=11 KV790750.1 Genbank gene 12683 13828 . + . ID=gene-HMPREF3107_00065;Name=HMPREF3107_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00065 KV790750.1 GeneMarkS+ CDS 12683 13828 . + 0 ID=cds-OFT04565.1;Parent=gene-HMPREF3107_00065;Dbxref=NCBI_GP:OFT04565.1;Name=OFT04565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00065;product=hypothetical protein;protein_id=OFT04565.1;transl_table=11 KV790750.1 Genbank gene 14150 15418 . + . ID=gene-HMPREF3107_00070;Name=HMPREF3107_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00070 KV790750.1 Protein Homology CDS 14150 15418 . + 0 ID=cds-OFT04566.1;Parent=gene-HMPREF3107_00070;Dbxref=NCBI_GP:OFT04566.1;Name=OFT04566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775403.1;locus_tag=HMPREF3107_00070;product=hypothetical protein;protein_id=OFT04566.1;transl_table=11 KV790750.1 Genbank gene 15502 16389 . + . ID=gene-HMPREF3107_00075;Name=HMPREF3107_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00075 KV790750.1 Protein Homology CDS 15502 16389 . + 0 ID=cds-OFT04567.1;Parent=gene-HMPREF3107_00075;Dbxref=NCBI_GP:OFT04567.1;Name=OFT04567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775404.1;locus_tag=HMPREF3107_00075;product=lauroyl acyltransferase;protein_id=OFT04567.1;transl_table=11 KV790750.1 Genbank gene 16988 17992 . - . ID=gene-HMPREF3107_00080;Name=HMPREF3107_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00080 KV790750.1 Protein Homology CDS 16988 17992 . - 0 ID=cds-OFT04568.1;Parent=gene-HMPREF3107_00080;Dbxref=NCBI_GP:OFT04568.1;Name=OFT04568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312645.1;locus_tag=HMPREF3107_00080;product=aminoglycoside phosphotransferase;protein_id=OFT04568.1;transl_table=11 KV790750.1 Genbank gene 18062 20392 . + . ID=gene-HMPREF3107_00085;Name=HMPREF3107_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00085 KV790750.1 Protein Homology CDS 18062 20392 . + 0 ID=cds-OFT04569.1;Parent=gene-HMPREF3107_00085;Dbxref=NCBI_GP:OFT04569.1;Name=OFT04569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284460.1;locus_tag=HMPREF3107_00085;product=LPS biosynthesis protein;protein_id=OFT04569.1;transl_table=11 KV790750.1 Genbank gene 20389 21351 . + . ID=gene-HMPREF3107_00090;Name=HMPREF3107_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00090 KV790750.1 Protein Homology CDS 20389 21351 . + 0 ID=cds-OFT04570.1;Parent=gene-HMPREF3107_00090;Dbxref=NCBI_GP:OFT04570.1;Name=OFT04570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775410.1;locus_tag=HMPREF3107_00090;product=peptidylprolyl isomerase;protein_id=OFT04570.1;transl_table=11 KV790750.1 Genbank gene 21495 21770 . + . ID=gene-HMPREF3107_00095;Name=HMPREF3107_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00095 KV790750.1 Protein Homology CDS 21495 21770 . + 0 ID=cds-OFT04571.1;Parent=gene-HMPREF3107_00095;Dbxref=NCBI_GP:OFT04571.1;Name=OFT04571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775411.1;locus_tag=HMPREF3107_00095;product=hypothetical protein;protein_id=OFT04571.1;transl_table=11 KV790750.1 Genbank gene 21959 22702 . - . ID=gene-HMPREF3107_00100;Name=HMPREF3107_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00100 KV790750.1 GeneMarkS+ CDS 21959 22702 . - 0 ID=cds-OFT04572.1;Parent=gene-HMPREF3107_00100;Dbxref=NCBI_GP:OFT04572.1;Name=OFT04572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00100;product=hypothetical protein;protein_id=OFT04572.1;transl_table=11 KV790750.1 Genbank gene 22705 23187 . - . ID=gene-HMPREF3107_00105;Name=HMPREF3107_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00105 KV790750.1 Protein Homology CDS 22705 23187 . - 0 ID=cds-OFT04573.1;Parent=gene-HMPREF3107_00105;Dbxref=NCBI_GP:OFT04573.1;Name=OFT04573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013535792.1;locus_tag=HMPREF3107_00105;product=diguanylate cyclase;protein_id=OFT04573.1;transl_table=11 KV790750.1 Genbank gene 23184 23567 . - . ID=gene-HMPREF3107_00110;Name=HMPREF3107_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00110 KV790750.1 Protein Homology CDS 23184 23567 . - 0 ID=cds-OFT04574.1;Parent=gene-HMPREF3107_00110;Dbxref=NCBI_GP:OFT04574.1;Name=OFT04574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343910.1;locus_tag=HMPREF3107_00110;product=hypothetical protein;protein_id=OFT04574.1;transl_table=11 KV790750.1 Genbank gene 24335 26395 . - . ID=gene-HMPREF3107_00115;Name=HMPREF3107_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00115 KV790750.1 Protein Homology CDS 24335 26395 . - 0 ID=cds-OFT04575.1;Parent=gene-HMPREF3107_00115;Dbxref=NCBI_GP:OFT04575.1;Name=OFT04575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341556.1;locus_tag=HMPREF3107_00115;product=RNA degradosome polyphosphate kinase;protein_id=OFT04575.1;transl_table=11 KV790750.1 Genbank gene 26669 27052 . + . ID=gene-HMPREF3107_00120;Name=HMPREF3107_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00120 KV790750.1 Protein Homology CDS 26669 27052 . + 0 ID=cds-OFT04576.1;Parent=gene-HMPREF3107_00120;Dbxref=NCBI_GP:OFT04576.1;Name=OFT04576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775415.1;locus_tag=HMPREF3107_00120;product=hypothetical protein;protein_id=OFT04576.1;transl_table=11 KV790750.1 Genbank gene 27145 27420 . - . ID=gene-HMPREF3107_00125;Name=HMPREF3107_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00125 KV790750.1 Protein Homology CDS 27145 27420 . - 0 ID=cds-OFT04577.1;Parent=gene-HMPREF3107_00125;Dbxref=NCBI_GP:OFT04577.1;Name=OFT04577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174919.1;locus_tag=HMPREF3107_00125;product=oxidative damage protection protein;protein_id=OFT04577.1;transl_table=11 KV790750.1 Genbank gene 27459 28388 . - . ID=gene-HMPREF3107_00130;Name=HMPREF3107_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00130 KV790750.1 Protein Homology CDS 27459 28388 . - 0 ID=cds-OFT04578.1;Parent=gene-HMPREF3107_00130;Dbxref=NCBI_GP:OFT04578.1;Name=OFT04578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341341.1;locus_tag=HMPREF3107_00130;product=LysR family transcriptional regulator;protein_id=OFT04578.1;transl_table=11 KV790750.1 Genbank gene 28628 29233 . + . ID=gene-HMPREF3107_00135;Name=HMPREF3107_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00135 KV790750.1 Protein Homology CDS 28628 29233 . + 0 ID=cds-OFT04579.1;Parent=gene-HMPREF3107_00135;Dbxref=NCBI_GP:OFT04579.1;Name=OFT04579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115232.1;locus_tag=HMPREF3107_00135;product=nitroreductase;protein_id=OFT04579.1;transl_table=11 KV790750.1 Genbank pseudogene 30370 32309 . + . ID=gene-HMPREF3107_00140;Name=HMPREF3107_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00140;pseudo=true KV790750.1 GeneMarkS+ CDS 30370 32309 . + 0 ID=cds-HMPREF3107_00140;Parent=gene-HMPREF3107_00140;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00140;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790751.1 1 13739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790751.1 Genbank region 1 13739 . + . ID=KV790751.1:1..13739;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790751.1 Genbank gene 70 438 . + . ID=gene-HMPREF3107_00145;Name=HMPREF3107_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00145 KV790751.1 Protein Homology CDS 70 438 . + 0 ID=cds-OFT04536.1;Parent=gene-HMPREF3107_00145;Dbxref=NCBI_GP:OFT04536.1;Name=OFT04536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749158.1;locus_tag=HMPREF3107_00145;product=hypothetical protein;protein_id=OFT04536.1;transl_table=11 KV790751.1 Genbank gene 641 1675 . + . ID=gene-HMPREF3107_00150;Name=HMPREF3107_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00150 KV790751.1 Protein Homology CDS 641 1675 . + 0 ID=cds-OFT04537.1;Parent=gene-HMPREF3107_00150;Dbxref=NCBI_GP:OFT04537.1;Name=OFT04537.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687600.1;locus_tag=HMPREF3107_00150;product=dihydroorotase;protein_id=OFT04537.1;transl_table=11 KV790751.1 Genbank gene 1867 2409 . + . ID=gene-HMPREF3107_00155;Name=HMPREF3107_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00155 KV790751.1 Protein Homology CDS 1867 2409 . + 0 ID=cds-OFT04538.1;Parent=gene-HMPREF3107_00155;Dbxref=NCBI_GP:OFT04538.1;Name=OFT04538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341934.1;locus_tag=HMPREF3107_00155;product=alkylhydroperoxidase;protein_id=OFT04538.1;transl_table=11 KV790751.1 Genbank gene 2523 3629 . + . ID=gene-HMPREF3107_00160;Name=HMPREF3107_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00160 KV790751.1 Protein Homology CDS 2523 3629 . + 0 ID=cds-OFT04539.1;Parent=gene-HMPREF3107_00160;Dbxref=NCBI_GP:OFT04539.1;Name=OFT04539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774200.1;locus_tag=HMPREF3107_00160;product=acyl-CoA dehydrogenase;protein_id=OFT04539.1;transl_table=11 KV790751.1 Genbank gene 3973 4143 . + . ID=gene-HMPREF3107_00165;Name=HMPREF3107_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00165 KV790751.1 Protein Homology CDS 3973 4143 . + 0 ID=cds-OFT04540.1;Parent=gene-HMPREF3107_00165;Dbxref=NCBI_GP:OFT04540.1;Name=OFT04540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425754.1;locus_tag=HMPREF3107_00165;product=rubredoxin;protein_id=OFT04540.1;transl_table=11 KV790751.1 Genbank gene 4235 5647 . + . ID=gene-HMPREF3107_00170;Name=HMPREF3107_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00170 KV790751.1 Protein Homology CDS 4235 5647 . + 0 ID=cds-OFT04541.1;Parent=gene-HMPREF3107_00170;Dbxref=NCBI_GP:OFT04541.1;Name=OFT04541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774207.1;locus_tag=HMPREF3107_00170;product=replicative DNA helicase;protein_id=OFT04541.1;transl_table=11 KV790751.1 Genbank gene 5764 6489 . + . ID=gene-HMPREF3107_00175;Name=HMPREF3107_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00175 KV790751.1 GeneMarkS+ CDS 5764 6489 . + 0 ID=cds-OFT04542.1;Parent=gene-HMPREF3107_00175;Dbxref=NCBI_GP:OFT04542.1;Name=OFT04542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00175;product=hypothetical protein;protein_id=OFT04542.1;transl_table=11 KV790751.1 Genbank gene 6476 7060 . + . ID=gene-HMPREF3107_00180;Name=HMPREF3107_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00180 KV790751.1 GeneMarkS+ CDS 6476 7060 . + 0 ID=cds-OFT04543.1;Parent=gene-HMPREF3107_00180;Dbxref=NCBI_GP:OFT04543.1;Name=OFT04543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00180;product=hypothetical protein;protein_id=OFT04543.1;transl_table=11 KV790751.1 Genbank gene 7066 8160 . + . ID=gene-HMPREF3107_00185;Name=HMPREF3107_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00185 KV790751.1 Protein Homology CDS 7066 8160 . + 0 ID=cds-OFT04544.1;Parent=gene-HMPREF3107_00185;Dbxref=NCBI_GP:OFT04544.1;Name=OFT04544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341940.1;locus_tag=HMPREF3107_00185;product=prepilin-type N;protein_id=OFT04544.1;transl_table=11 KV790751.1 Genbank gene 8160 8663 . + . ID=gene-HMPREF3107_00190;Name=HMPREF3107_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00190 KV790751.1 GeneMarkS+ CDS 8160 8663 . + 0 ID=cds-OFT04545.1;Parent=gene-HMPREF3107_00190;Dbxref=NCBI_GP:OFT04545.1;Name=OFT04545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00190;product=hypothetical protein;protein_id=OFT04545.1;transl_table=11 KV790751.1 Genbank gene 8673 9173 . + . ID=gene-HMPREF3107_00195;Name=HMPREF3107_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00195 KV790751.1 GeneMarkS+ CDS 8673 9173 . + 0 ID=cds-OFT04546.1;Parent=gene-HMPREF3107_00195;Dbxref=NCBI_GP:OFT04546.1;Name=OFT04546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00195;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=OFT04546.1;transl_table=11 KV790751.1 Genbank gene 9273 10121 . + . ID=gene-HMPREF3107_00200;Name=HMPREF3107_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00200 KV790751.1 Protein Homology CDS 9273 10121 . + 0 ID=cds-OFT04547.1;Parent=gene-HMPREF3107_00200;Dbxref=NCBI_GP:OFT04547.1;Name=OFT04547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520626.1;locus_tag=HMPREF3107_00200;product=squalene synthase HpnD;protein_id=OFT04547.1;transl_table=11 KV790751.1 Genbank gene 10118 11419 . + . ID=gene-HMPREF3107_00205;Name=HMPREF3107_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00205 KV790751.1 Protein Homology CDS 10118 11419 . + 0 ID=cds-OFT04548.1;Parent=gene-HMPREF3107_00205;Dbxref=NCBI_GP:OFT04548.1;Name=OFT04548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774223.1;locus_tag=HMPREF3107_00205;product=oxidoreductase;protein_id=OFT04548.1;transl_table=11 KV790751.1 Genbank gene 11523 12275 . + . ID=gene-HMPREF3107_00210;Name=HMPREF3107_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00210 KV790751.1 Protein Homology CDS 11523 12275 . + 0 ID=cds-OFT04549.1;Parent=gene-HMPREF3107_00210;Dbxref=NCBI_GP:OFT04549.1;Name=OFT04549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774227.1;locus_tag=HMPREF3107_00210;product=5'/3'-nucleotidase SurE;protein_id=OFT04549.1;transl_table=11 KV790751.1 Genbank gene 12400 13377 . + . ID=gene-HMPREF3107_00215;Name=HMPREF3107_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00215 KV790751.1 Protein Homology CDS 12400 13377 . + 0 ID=cds-OFT04550.1;Parent=gene-HMPREF3107_00215;Dbxref=NCBI_GP:OFT04550.1;Name=OFT04550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686291.1;locus_tag=HMPREF3107_00215;product=peptidoglycan-binding protein LysM;protein_id=OFT04550.1;transl_table=11 ##sequence-region KV790752.1 1 2575 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790752.1 Genbank region 1 2575 . + . ID=KV790752.1:1..2575;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790752.1 Genbank gene 46 2334 . - . ID=gene-HMPREF3107_00220;Name=HMPREF3107_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00220 KV790752.1 Protein Homology CDS 46 2334 . - 0 ID=cds-OFT04492.1;Parent=gene-HMPREF3107_00220;Dbxref=NCBI_GP:OFT04492.1;Name=OFT04492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686219.1;locus_tag=HMPREF3107_00220;product=ligand-gated channel;protein_id=OFT04492.1;transl_table=11 ##sequence-region KV790753.1 1 6724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790753.1 Genbank region 1 6724 . + . ID=KV790753.1:1..6724;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790753.1 Genbank gene 420 2186 . + . ID=gene-HMPREF3107_00225;Name=HMPREF3107_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00225 KV790753.1 Protein Homology CDS 420 2186 . + 0 ID=cds-OFT04486.1;Parent=gene-HMPREF3107_00225;Dbxref=NCBI_GP:OFT04486.1;Name=OFT04486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273535.1;locus_tag=HMPREF3107_00225;product=KAP family P-loop domain protein;protein_id=OFT04486.1;transl_table=11 KV790753.1 Genbank gene 2190 2930 . + . ID=gene-HMPREF3107_00230;Name=HMPREF3107_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00230 KV790753.1 Protein Homology CDS 2190 2930 . + 0 ID=cds-OFT04487.1;Parent=gene-HMPREF3107_00230;Dbxref=NCBI_GP:OFT04487.1;Name=OFT04487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526534.1;locus_tag=HMPREF3107_00230;product=hypothetical protein;protein_id=OFT04487.1;transl_table=11 KV790753.1 Genbank gene 4243 4974 . + . ID=gene-HMPREF3107_00235;Name=HMPREF3107_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00235 KV790753.1 Protein Homology CDS 4243 4974 . + 0 ID=cds-OFT04488.1;Parent=gene-HMPREF3107_00235;Dbxref=NCBI_GP:OFT04488.1;Name=OFT04488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685459.1;locus_tag=HMPREF3107_00235;product=hydrolase TatD;protein_id=OFT04488.1;transl_table=11 KV790753.1 Genbank pseudogene 4995 5386 . + . ID=gene-HMPREF3107_00240;Name=HMPREF3107_00240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00240;pseudo=true KV790753.1 Protein Homology CDS 4995 5386 . + 0 ID=cds-HMPREF3107_00240;Parent=gene-HMPREF3107_00240;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756659.1;locus_tag=HMPREF3107_00240;product=hypothetical protein;pseudo=true;transl_table=11 KV790753.1 Genbank pseudogene 5491 5785 . - . ID=gene-HMPREF3107_00245;Name=HMPREF3107_00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00245;pseudo=true KV790753.1 Protein Homology CDS 5491 5785 . - 1 ID=cds-HMPREF3107_00245;Parent=gene-HMPREF3107_00245;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756627.1;locus_tag=HMPREF3107_00245;product=hypothetical protein;pseudo=true;transl_table=11 KV790753.1 Genbank gene 5806 6508 . - . ID=gene-HMPREF3107_00250;Name=HMPREF3107_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00250;partial=true;start_range=.,5806 KV790753.1 Protein Homology CDS 5806 6508 . - 0 ID=cds-OFT04480.1;Parent=gene-HMPREF3107_00250;Dbxref=NCBI_GP:OFT04480.1;Name=OFT04480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684692.1;locus_tag=HMPREF3107_00250;partial=true;product=integrase;protein_id=OFT04480.1;start_range=.,5806;transl_table=11 ##sequence-region KV790754.1 1 4437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790754.1 Genbank region 1 4437 . + . ID=KV790754.1:1..4437;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790754.1 Genbank gene 161 523 . + . ID=gene-HMPREF3107_00255;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=HMPREF3107_00255 KV790754.1 cmsearch tmRNA 161 523 . + . ID=rna-HMPREF3107_00255;Parent=gene-HMPREF3107_00255;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_00255;product=transfer-messenger RNA KV790754.1 cmsearch exon 161 523 . + . ID=exon-HMPREF3107_00255-1;Parent=rna-HMPREF3107_00255;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_00255;product=transfer-messenger RNA KV790754.1 Genbank gene 803 991 . + . ID=gene-HMPREF3107_00260;Name=HMPREF3107_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00260 KV790754.1 GeneMarkS+ CDS 803 991 . + 0 ID=cds-OFT04460.1;Parent=gene-HMPREF3107_00260;Dbxref=NCBI_GP:OFT04460.1;Name=OFT04460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00260;product=hypothetical protein;protein_id=OFT04460.1;transl_table=11 KV790754.1 Genbank gene 978 1325 . + . ID=gene-HMPREF3107_00265;Name=HMPREF3107_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00265 KV790754.1 GeneMarkS+ CDS 978 1325 . + 0 ID=cds-OFT04461.1;Parent=gene-HMPREF3107_00265;Dbxref=NCBI_GP:OFT04461.1;Name=OFT04461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00265;product=hypothetical protein;protein_id=OFT04461.1;transl_table=11 KV790754.1 Genbank pseudogene 1656 1979 . + . ID=gene-HMPREF3107_00270;Name=HMPREF3107_00270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00270;pseudo=true KV790754.1 Protein Homology CDS 1656 1979 . + 0 ID=cds-HMPREF3107_00270;Parent=gene-HMPREF3107_00270;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711969.1;locus_tag=HMPREF3107_00270;product=hypothetical protein;pseudo=true;transl_table=11 KV790754.1 Genbank gene 2405 2665 . + . ID=gene-HMPREF3107_00275;Name=HMPREF3107_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00275 KV790754.1 GeneMarkS+ CDS 2405 2665 . + 0 ID=cds-OFT04462.1;Parent=gene-HMPREF3107_00275;Dbxref=NCBI_GP:OFT04462.1;Name=OFT04462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00275;product=hypothetical protein;protein_id=OFT04462.1;transl_table=11 KV790754.1 Genbank gene 2788 3060 . + . ID=gene-HMPREF3107_00280;Name=HMPREF3107_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00280 KV790754.1 GeneMarkS+ CDS 2788 3060 . + 0 ID=cds-OFT04463.1;Parent=gene-HMPREF3107_00280;Dbxref=NCBI_GP:OFT04463.1;Name=OFT04463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00280;product=hypothetical protein;protein_id=OFT04463.1;transl_table=11 KV790754.1 Genbank gene 3057 4103 . + . ID=gene-HMPREF3107_00285;Name=HMPREF3107_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00285 KV790754.1 Protein Homology CDS 3057 4103 . + 0 ID=cds-OFT04464.1;Parent=gene-HMPREF3107_00285;Dbxref=NCBI_GP:OFT04464.1;Name=OFT04464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283760.1;locus_tag=HMPREF3107_00285;product=hypothetical protein;protein_id=OFT04464.1;transl_table=11 KV790754.1 Genbank pseudogene 4100 4437 . + . ID=gene-HMPREF3107_00290;Name=HMPREF3107_00290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00290;pseudo=true KV790754.1 GeneMarkS+ CDS 4100 4437 . + 0 ID=cds-HMPREF3107_00290;Parent=gene-HMPREF3107_00290;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00290;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790755.1 1 89112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790755.1 Genbank region 1 89112 . + . ID=KV790755.1:1..89112;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790755.1 Genbank gene 79 747 . - . ID=gene-HMPREF3107_00295;Name=HMPREF3107_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00295 KV790755.1 Protein Homology CDS 79 747 . - 0 ID=cds-OFT04398.1;Parent=gene-HMPREF3107_00295;Dbxref=NCBI_GP:OFT04398.1;Name=OFT04398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310982.1;locus_tag=HMPREF3107_00295;product=DNA alkylation repair protein;protein_id=OFT04398.1;transl_table=11 KV790755.1 Genbank gene 832 1197 . - . ID=gene-HMPREF3107_00300;Name=HMPREF3107_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00300 KV790755.1 Protein Homology CDS 832 1197 . - 0 ID=cds-OFT04399.1;Parent=gene-HMPREF3107_00300;Dbxref=NCBI_GP:OFT04399.1;Name=OFT04399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684509.1;locus_tag=HMPREF3107_00300;product=hypothetical protein;protein_id=OFT04399.1;transl_table=11 KV790755.1 Genbank pseudogene 1481 1627 . - . ID=gene-HMPREF3107_00305;Name=HMPREF3107_00305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00305;pseudo=true KV790755.1 Protein Homology CDS 1481 1627 . - 0 ID=cds-HMPREF3107_00305;Parent=gene-HMPREF3107_00305;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784229.1;locus_tag=HMPREF3107_00305;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11 KV790755.1 Genbank gene 1699 2472 . - . ID=gene-HMPREF3107_00310;Name=HMPREF3107_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00310 KV790755.1 Protein Homology CDS 1699 2472 . - 0 ID=cds-OFT04424.1;Parent=gene-HMPREF3107_00310;Dbxref=NCBI_GP:OFT04424.1;Name=OFT04424.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746768.1;locus_tag=HMPREF3107_00310;product=4%2C5-DOPA dioxygenase extradiol;protein_id=OFT04424.1;transl_table=11 KV790755.1 Genbank gene 2765 3655 . - . ID=gene-HMPREF3107_00315;Name=HMPREF3107_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00315 KV790755.1 Protein Homology CDS 2765 3655 . - 0 ID=cds-OFT04400.1;Parent=gene-HMPREF3107_00315;Dbxref=NCBI_GP:OFT04400.1;Name=OFT04400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644161.1;locus_tag=HMPREF3107_00315;product=LysR family transcriptional regulator;protein_id=OFT04400.1;transl_table=11 KV790755.1 Genbank gene 3778 4359 . + . ID=gene-HMPREF3107_00320;Name=HMPREF3107_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00320 KV790755.1 Protein Homology CDS 3778 4359 . + 0 ID=cds-OFT04401.1;Parent=gene-HMPREF3107_00320;Dbxref=NCBI_GP:OFT04401.1;Name=OFT04401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012073808.1;locus_tag=HMPREF3107_00320;product=NAD-dependent dehydratase;protein_id=OFT04401.1;transl_table=11 KV790755.1 Genbank gene 4394 4837 . + . ID=gene-HMPREF3107_00325;Name=HMPREF3107_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00325 KV790755.1 Protein Homology CDS 4394 4837 . + 0 ID=cds-OFT04402.1;Parent=gene-HMPREF3107_00325;Dbxref=NCBI_GP:OFT04402.1;Name=OFT04402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015432992.1;locus_tag=HMPREF3107_00325;product=bile acid 7-alpha dehydratase;protein_id=OFT04402.1;transl_table=11 KV790755.1 Genbank gene 4951 5799 . + . ID=gene-HMPREF3107_00330;Name=HMPREF3107_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00330 KV790755.1 Protein Homology CDS 4951 5799 . + 0 ID=cds-OFT04403.1;Parent=gene-HMPREF3107_00330;Dbxref=NCBI_GP:OFT04403.1;Name=OFT04403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754528.1;locus_tag=HMPREF3107_00330;product=2%2C5-diketo-D-gluconic acid reductase;protein_id=OFT04403.1;transl_table=11 KV790755.1 Genbank gene 5849 6427 . + . ID=gene-HMPREF3107_00335;Name=HMPREF3107_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00335 KV790755.1 Protein Homology CDS 5849 6427 . + 0 ID=cds-OFT04404.1;Parent=gene-HMPREF3107_00335;Dbxref=NCBI_GP:OFT04404.1;Name=OFT04404.1;Note=involved in drug resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44803.1;locus_tag=HMPREF3107_00335;product=NADPH quinone reductase MdaB;protein_id=OFT04404.1;transl_table=11 KV790755.1 Genbank gene 6427 6732 . + . ID=gene-HMPREF3107_00340;Name=HMPREF3107_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00340 KV790755.1 Protein Homology CDS 6427 6732 . + 0 ID=cds-OFT04405.1;Parent=gene-HMPREF3107_00340;Dbxref=NCBI_GP:OFT04405.1;Name=OFT04405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641727.1;locus_tag=HMPREF3107_00340;product=aldo/keto reductase;protein_id=OFT04405.1;transl_table=11 KV790755.1 Genbank gene 6764 7279 . + . ID=gene-HMPREF3107_00345;Name=HMPREF3107_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00345 KV790755.1 Protein Homology CDS 6764 7279 . + 0 ID=cds-OFT04406.1;Parent=gene-HMPREF3107_00345;Dbxref=NCBI_GP:OFT04406.1;Name=OFT04406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824816.1;locus_tag=HMPREF3107_00345;product=hypothetical protein;protein_id=OFT04406.1;transl_table=11 KV790755.1 Genbank gene 7371 7706 . + . ID=gene-HMPREF3107_00350;Name=HMPREF3107_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00350 KV790755.1 Protein Homology CDS 7371 7706 . + 0 ID=cds-OFT04407.1;Parent=gene-HMPREF3107_00350;Dbxref=NCBI_GP:OFT04407.1;Name=OFT04407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677584.1;locus_tag=HMPREF3107_00350;product=thiol reductase thioredoxin;protein_id=OFT04407.1;transl_table=11 KV790755.1 Genbank gene 7840 8046 . + . ID=gene-HMPREF3107_00355;Name=HMPREF3107_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00355 KV790755.1 GeneMarkS+ CDS 7840 8046 . + 0 ID=cds-OFT04408.1;Parent=gene-HMPREF3107_00355;Dbxref=NCBI_GP:OFT04408.1;Name=OFT04408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00355;product=hypothetical protein;protein_id=OFT04408.1;transl_table=11 KV790755.1 Genbank gene 8403 9881 . - . ID=gene-HMPREF3107_00360;Name=HMPREF3107_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00360 KV790755.1 Protein Homology CDS 8403 9881 . - 0 ID=cds-OFT04425.1;Parent=gene-HMPREF3107_00360;Dbxref=NCBI_GP:OFT04425.1;Name=OFT04425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680302.1;locus_tag=HMPREF3107_00360;product=catalase;protein_id=OFT04425.1;transl_table=11 KV790755.1 Genbank gene 10256 12163 . - . ID=gene-HMPREF3107_00365;Name=HMPREF3107_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00365 KV790755.1 Protein Homology CDS 10256 12163 . - 0 ID=cds-OFT04409.1;Parent=gene-HMPREF3107_00365;Dbxref=NCBI_GP:OFT04409.1;Name=OFT04409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769782.1;locus_tag=HMPREF3107_00365;product=ABC transporter ATP-binding protein;protein_id=OFT04409.1;transl_table=11 KV790755.1 Genbank gene 12312 13298 . - . ID=gene-HMPREF3107_00370;Name=HMPREF3107_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00370 KV790755.1 Protein Homology CDS 12312 13298 . - 0 ID=cds-OFT04410.1;Parent=gene-HMPREF3107_00370;Dbxref=NCBI_GP:OFT04410.1;Name=OFT04410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678479.1;locus_tag=HMPREF3107_00370;product=AraC family transcriptional regulator;protein_id=OFT04410.1;transl_table=11 KV790755.1 Genbank gene 13396 14247 . + . ID=gene-HMPREF3107_00375;Name=HMPREF3107_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00375 KV790755.1 Protein Homology CDS 13396 14247 . + 0 ID=cds-OFT04411.1;Parent=gene-HMPREF3107_00375;Dbxref=NCBI_GP:OFT04411.1;Name=OFT04411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823631.1;locus_tag=HMPREF3107_00375;product=hypothetical protein;protein_id=OFT04411.1;transl_table=11 KV790755.1 Genbank gene 14321 15028 . - . ID=gene-HMPREF3107_00380;Name=HMPREF3107_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00380 KV790755.1 Protein Homology CDS 14321 15028 . - 0 ID=cds-OFT04412.1;Parent=gene-HMPREF3107_00380;Dbxref=NCBI_GP:OFT04412.1;Name=OFT04412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311734.1;locus_tag=HMPREF3107_00380;product=methyltransferase;protein_id=OFT04412.1;transl_table=11 KV790755.1 Genbank gene 15130 15783 . - . ID=gene-HMPREF3107_00385;Name=HMPREF3107_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00385 KV790755.1 Protein Homology CDS 15130 15783 . - 0 ID=cds-OFT04413.1;Parent=gene-HMPREF3107_00385;Dbxref=NCBI_GP:OFT04413.1;Name=OFT04413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173363.1;locus_tag=HMPREF3107_00385;product=methyltransferase;protein_id=OFT04413.1;transl_table=11 KV790755.1 Genbank gene 15891 16871 . - . ID=gene-HMPREF3107_00390;Name=HMPREF3107_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00390 KV790755.1 Protein Homology CDS 15891 16871 . - 0 ID=cds-OFT04414.1;Parent=gene-HMPREF3107_00390;Dbxref=NCBI_GP:OFT04414.1;Name=OFT04414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173631.1;locus_tag=HMPREF3107_00390;product=pyrroline-5-carboxylate reductase;protein_id=OFT04414.1;transl_table=11 KV790755.1 Genbank gene 16902 17348 . - . ID=gene-HMPREF3107_00395;Name=HMPREF3107_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00395 KV790755.1 Protein Homology CDS 16902 17348 . - 0 ID=cds-OFT04415.1;Parent=gene-HMPREF3107_00395;Dbxref=NCBI_GP:OFT04415.1;Name=OFT04415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173630.1;locus_tag=HMPREF3107_00395;product=hypothetical protein;protein_id=OFT04415.1;transl_table=11 KV790755.1 Genbank gene 17484 17894 . - . ID=gene-HMPREF3107_00400;Name=HMPREF3107_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00400 KV790755.1 Protein Homology CDS 17484 17894 . - 0 ID=cds-OFT04426.1;Parent=gene-HMPREF3107_00400;Dbxref=NCBI_GP:OFT04426.1;Name=OFT04426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002244572.1;locus_tag=HMPREF3107_00400;product=MarR family transcriptional regulator;protein_id=OFT04426.1;transl_table=11 KV790755.1 Genbank gene 18084 18551 . + . ID=gene-HMPREF3107_00405;Name=HMPREF3107_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00405 KV790755.1 Protein Homology CDS 18084 18551 . + 0 ID=cds-OFT04416.1;Parent=gene-HMPREF3107_00405;Dbxref=NCBI_GP:OFT04416.1;Name=OFT04416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173628.1;locus_tag=HMPREF3107_00405;product=hypothetical protein;protein_id=OFT04416.1;transl_table=11 KV790755.1 Genbank gene 18665 19744 . - . ID=gene-HMPREF3107_00410;Name=HMPREF3107_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00410 KV790755.1 Protein Homology CDS 18665 19744 . - 0 ID=cds-OFT04417.1;Parent=gene-HMPREF3107_00410;Dbxref=NCBI_GP:OFT04417.1;Name=OFT04417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784248.1;locus_tag=HMPREF3107_00410;product=hypothetical protein;protein_id=OFT04417.1;transl_table=11 KV790755.1 Genbank gene 19906 20985 . - . ID=gene-HMPREF3107_00415;Name=HMPREF3107_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00415 KV790755.1 Protein Homology CDS 19906 20985 . - 0 ID=cds-OFT04418.1;Parent=gene-HMPREF3107_00415;Dbxref=NCBI_GP:OFT04418.1;Name=OFT04418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769794.1;locus_tag=HMPREF3107_00415;product=hypothetical protein;protein_id=OFT04418.1;transl_table=11 KV790755.1 Genbank gene 21324 22607 . - . ID=gene-HMPREF3107_00420;Name=HMPREF3107_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00420 KV790755.1 Protein Homology CDS 21324 22607 . - 0 ID=cds-OFT04427.1;Parent=gene-HMPREF3107_00420;Dbxref=NCBI_GP:OFT04427.1;Name=OFT04427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003793531.1;locus_tag=HMPREF3107_00420;product=alpha/beta hydrolase;protein_id=OFT04427.1;transl_table=11 KV790755.1 Genbank gene 22956 24428 . - . ID=gene-HMPREF3107_00425;Name=HMPREF3107_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00425 KV790755.1 GeneMarkS+ CDS 22956 24428 . - 0 ID=cds-OFT04419.1;Parent=gene-HMPREF3107_00425;Dbxref=NCBI_GP:OFT04419.1;Name=OFT04419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00425;product=hypothetical protein;protein_id=OFT04419.1;transl_table=11 KV790755.1 Genbank gene 24693 27056 . - . ID=gene-HMPREF3107_00430;Name=HMPREF3107_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00430 KV790755.1 Protein Homology CDS 24693 27056 . - 0 ID=cds-OFT04420.1;Parent=gene-HMPREF3107_00430;Dbxref=NCBI_GP:OFT04420.1;Name=OFT04420.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781312.1;locus_tag=HMPREF3107_00430;product=outer membrane receptor protein;protein_id=OFT04420.1;transl_table=11 KV790755.1 Genbank gene 27235 27960 . + . ID=gene-HMPREF3107_00435;Name=HMPREF3107_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00435 KV790755.1 Protein Homology CDS 27235 27960 . + 0 ID=cds-OFT04421.1;Parent=gene-HMPREF3107_00435;Dbxref=NCBI_GP:OFT04421.1;Name=OFT04421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686937.1;locus_tag=HMPREF3107_00435;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=OFT04421.1;transl_table=11 KV790755.1 Genbank gene 28093 30306 . - . ID=gene-HMPREF3107_00440;Name=HMPREF3107_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00440 KV790755.1 Protein Homology CDS 28093 30306 . - 0 ID=cds-OFT04422.1;Parent=gene-HMPREF3107_00440;Dbxref=NCBI_GP:OFT04422.1;Name=OFT04422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520657.1;locus_tag=HMPREF3107_00440;product=GTP pyrophosphokinase;protein_id=OFT04422.1;transl_table=11 KV790755.1 Genbank gene 30296 30481 . + . ID=gene-HMPREF3107_00445;Name=HMPREF3107_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00445 KV790755.1 GeneMarkS+ CDS 30296 30481 . + 0 ID=cds-OFT04423.1;Parent=gene-HMPREF3107_00445;Dbxref=NCBI_GP:OFT04423.1;Name=OFT04423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00445;product=hypothetical protein;protein_id=OFT04423.1;transl_table=11 KV790755.1 Genbank pseudogene 30529 30758 . - . ID=gene-HMPREF3107_00450;Name=HMPREF3107_00450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00450;pseudo=true KV790755.1 Protein Homology CDS 30529 30758 . - 0 ID=cds-HMPREF3107_00450;Parent=gene-HMPREF3107_00450;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003785259.1;locus_tag=HMPREF3107_00450;product=hypothetical protein;pseudo=true;transl_table=11 KV790755.1 Genbank gene 30937 31293 . - . ID=gene-HMPREF3107_00455;Name=HMPREF3107_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00455 KV790755.1 Protein Homology CDS 30937 31293 . - 0 ID=cds-OFT04281.1;Parent=gene-HMPREF3107_00455;Dbxref=NCBI_GP:OFT04281.1;Name=OFT04281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003785259.1;locus_tag=HMPREF3107_00455;product=hypothetical protein;protein_id=OFT04281.1;transl_table=11 KV790755.1 Genbank gene 31776 32423 . + . ID=gene-HMPREF3107_00460;Name=HMPREF3107_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00460 KV790755.1 Protein Homology CDS 31776 32423 . + 0 ID=cds-OFT04282.1;Parent=gene-HMPREF3107_00460;Dbxref=NCBI_GP:OFT04282.1;Name=OFT04282.1;Note=cofactor involved in the reduction of disulfides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283726.1;locus_tag=HMPREF3107_00460;product=glutaredoxin;protein_id=OFT04282.1;transl_table=11 KV790755.1 Genbank gene 32632 33735 . - . ID=gene-HMPREF3107_00465;Name=HMPREF3107_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00465 KV790755.1 Protein Homology CDS 32632 33735 . - 0 ID=cds-OFT04283.1;Parent=gene-HMPREF3107_00465;Dbxref=NCBI_GP:OFT04283.1;Name=OFT04283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341454.1;locus_tag=HMPREF3107_00465;product=A/G-specific adenine glycosylase;protein_id=OFT04283.1;transl_table=11 KV790755.1 Genbank gene 33835 34479 . - . ID=gene-HMPREF3107_00470;Name=HMPREF3107_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00470 KV790755.1 Protein Homology CDS 33835 34479 . - 0 ID=cds-OFT04284.1;Parent=gene-HMPREF3107_00470;Dbxref=NCBI_GP:OFT04284.1;Name=OFT04284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769806.1;locus_tag=HMPREF3107_00470;product=endonuclease III;protein_id=OFT04284.1;transl_table=11 KV790755.1 Genbank gene 34476 35072 . - . ID=gene-HMPREF3107_00475;Name=HMPREF3107_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00475 KV790755.1 Protein Homology CDS 34476 35072 . - 0 ID=cds-OFT04285.1;Parent=gene-HMPREF3107_00475;Dbxref=NCBI_GP:OFT04285.1;Name=OFT04285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769808.1;locus_tag=HMPREF3107_00475;product=nuclease;protein_id=OFT04285.1;transl_table=11 KV790755.1 Genbank gene 35236 35904 . - . ID=gene-HMPREF3107_00480;Name=HMPREF3107_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00480 KV790755.1 Protein Homology CDS 35236 35904 . - 0 ID=cds-OFT04286.1;Parent=gene-HMPREF3107_00480;Dbxref=NCBI_GP:OFT04286.1;Name=OFT04286.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769809.1;locus_tag=HMPREF3107_00480;product=ribose 5-phosphate isomerase A;protein_id=OFT04286.1;transl_table=11 KV790755.1 Genbank gene 36113 38053 . - . ID=gene-HMPREF3107_00485;Name=HMPREF3107_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00485 KV790755.1 Protein Homology CDS 36113 38053 . - 0 ID=cds-OFT04302.1;Parent=gene-HMPREF3107_00485;Dbxref=NCBI_GP:OFT04302.1;Name=OFT04302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312671.1;locus_tag=HMPREF3107_00485;product=phosphoenolpyruvate synthase;protein_id=OFT04302.1;transl_table=11 KV790755.1 Genbank gene 38216 39160 . + . ID=gene-HMPREF3107_00490;Name=HMPREF3107_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00490 KV790755.1 Protein Homology CDS 38216 39160 . + 0 ID=cds-OFT04287.1;Parent=gene-HMPREF3107_00490;Dbxref=NCBI_GP:OFT04287.1;Name=OFT04287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312670.1;locus_tag=HMPREF3107_00490;product=hypothetical protein;protein_id=OFT04287.1;transl_table=11 KV790755.1 Genbank gene 39380 40774 . - . ID=gene-HMPREF3107_00495;Name=HMPREF3107_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00495 KV790755.1 Protein Homology CDS 39380 40774 . - 0 ID=cds-OFT04288.1;Parent=gene-HMPREF3107_00495;Dbxref=NCBI_GP:OFT04288.1;Name=OFT04288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745770.1;locus_tag=HMPREF3107_00495;product=RNA helicase;protein_id=OFT04288.1;transl_table=11 KV790755.1 Genbank pseudogene 41025 42113 . + . ID=gene-HMPREF3107_00500;Name=HMPREF3107_00500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00500;pseudo=true KV790755.1 Protein Homology CDS 41025 42113 . + 0 ID=cds-HMPREF3107_00500;Parent=gene-HMPREF3107_00500;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003705279.1;locus_tag=HMPREF3107_00500;product=cytochrome-c peroxidase;pseudo=true;transl_table=11 KV790755.1 Genbank gene 42251 42802 . + . ID=gene-HMPREF3107_00505;Name=HMPREF3107_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00505 KV790755.1 Protein Homology CDS 42251 42802 . + 0 ID=cds-OFT04303.1;Parent=gene-HMPREF3107_00505;Dbxref=NCBI_GP:OFT04303.1;Name=OFT04303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520668.1;locus_tag=HMPREF3107_00505;product=nucleotide exchange factor GrpE;protein_id=OFT04303.1;transl_table=11 KV790755.1 Genbank gene 43043 44974 . + . ID=gene-HMPREF3107_00510;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HMPREF3107_00510 KV790755.1 Protein Homology CDS 43043 44974 . + 0 ID=cds-OFT04289.1;Parent=gene-HMPREF3107_00510;Dbxref=NCBI_GP:OFT04289.1;Name=OFT04289.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753851.1;locus_tag=HMPREF3107_00510;product=molecular chaperone DnaK;protein_id=OFT04289.1;transl_table=11 KV790755.1 Genbank gene 45140 45589 . - . ID=gene-HMPREF3107_00515;Name=HMPREF3107_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00515 KV790755.1 Protein Homology CDS 45140 45589 . - 0 ID=cds-OFT04304.1;Parent=gene-HMPREF3107_00515;Dbxref=NCBI_GP:OFT04304.1;Name=OFT04304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226109.1;locus_tag=HMPREF3107_00515;product=transposase;protein_id=OFT04304.1;transl_table=11 KV790755.1 Genbank gene 45959 46405 . - . ID=gene-HMPREF3107_00520;Name=HMPREF3107_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00520 KV790755.1 GeneMarkS+ CDS 45959 46405 . - 0 ID=cds-OFT04290.1;Parent=gene-HMPREF3107_00520;Dbxref=NCBI_GP:OFT04290.1;Name=OFT04290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00520;product=hypothetical protein;protein_id=OFT04290.1;transl_table=11 KV790755.1 Genbank gene 46530 48302 . - . ID=gene-HMPREF3107_00525;Name=HMPREF3107_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00525 KV790755.1 Protein Homology CDS 46530 48302 . - 0 ID=cds-OFT04291.1;Parent=gene-HMPREF3107_00525;Dbxref=NCBI_GP:OFT04291.1;Name=OFT04291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769832.1;locus_tag=HMPREF3107_00525;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=OFT04291.1;transl_table=11 KV790755.1 Genbank gene 48558 49394 . - . ID=gene-HMPREF3107_00530;Name=HMPREF3107_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00530 KV790755.1 GeneMarkS+ CDS 48558 49394 . - 0 ID=cds-OFT04292.1;Parent=gene-HMPREF3107_00530;Dbxref=NCBI_GP:OFT04292.1;Name=OFT04292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00530;product=hypothetical protein;protein_id=OFT04292.1;transl_table=11 KV790755.1 Genbank gene 49495 50130 . - . ID=gene-HMPREF3107_00535;Name=HMPREF3107_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00535 KV790755.1 Protein Homology CDS 49495 50130 . - 0 ID=cds-OFT04293.1;Parent=gene-HMPREF3107_00535;Dbxref=NCBI_GP:OFT04293.1;Name=OFT04293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769836.1;locus_tag=HMPREF3107_00535;product=hypothetical protein;protein_id=OFT04293.1;transl_table=11 KV790755.1 Genbank gene 50230 51036 . + . ID=gene-HMPREF3107_00540;Name=HMPREF3107_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00540 KV790755.1 Protein Homology CDS 50230 51036 . + 0 ID=cds-OFT04305.1;Parent=gene-HMPREF3107_00540;Dbxref=NCBI_GP:OFT04305.1;Name=OFT04305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270762.1;locus_tag=HMPREF3107_00540;product=ATP-dependent DNA ligase;protein_id=OFT04305.1;transl_table=11 KV790755.1 Genbank gene 51112 51828 . - . ID=gene-HMPREF3107_00545;Name=HMPREF3107_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00545 KV790755.1 Protein Homology CDS 51112 51828 . - 0 ID=cds-OFT04306.1;Parent=gene-HMPREF3107_00545;Dbxref=NCBI_GP:OFT04306.1;Name=OFT04306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769839.1;locus_tag=HMPREF3107_00545;product=hypothetical protein;protein_id=OFT04306.1;transl_table=11 KV790755.1 Genbank gene 52037 52618 . + . ID=gene-HMPREF3107_00550;Name=HMPREF3107_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00550 KV790755.1 Protein Homology CDS 52037 52618 . + 0 ID=cds-OFT04307.1;Parent=gene-HMPREF3107_00550;Dbxref=NCBI_GP:OFT04307.1;Name=OFT04307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273283.1;locus_tag=HMPREF3107_00550;product=D-glycero-beta-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=OFT04307.1;transl_table=11 KV790755.1 Genbank gene 52602 53333 . + . ID=gene-HMPREF3107_00555;Name=HMPREF3107_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00555 KV790755.1 Protein Homology CDS 52602 53333 . + 0 ID=cds-OFT04294.1;Parent=gene-HMPREF3107_00555;Dbxref=NCBI_GP:OFT04294.1;Name=OFT04294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769846.1;locus_tag=HMPREF3107_00555;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFT04294.1;transl_table=11 KV790755.1 Genbank gene 53444 54937 . - . ID=gene-HMPREF3107_00560;Name=HMPREF3107_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00560 KV790755.1 Protein Homology CDS 53444 54937 . - 0 ID=cds-OFT04295.1;Parent=gene-HMPREF3107_00560;Dbxref=NCBI_GP:OFT04295.1;Name=OFT04295.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754268.1;locus_tag=HMPREF3107_00560;product=ribonuclease G;protein_id=OFT04295.1;transl_table=11 KV790755.1 Genbank gene 55084 55503 . - . ID=gene-HMPREF3107_00565;Name=HMPREF3107_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00565 KV790755.1 GeneMarkS+ CDS 55084 55503 . - 0 ID=cds-OFT04296.1;Parent=gene-HMPREF3107_00565;Dbxref=NCBI_GP:OFT04296.1;Name=OFT04296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00565;product=hypothetical protein;protein_id=OFT04296.1;transl_table=11 KV790755.1 Genbank gene 55528 55941 . - . ID=gene-HMPREF3107_00570;Name=HMPREF3107_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00570 KV790755.1 Protein Homology CDS 55528 55941 . - 0 ID=cds-OFT04297.1;Parent=gene-HMPREF3107_00570;Dbxref=NCBI_GP:OFT04297.1;Name=OFT04297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712563.1;locus_tag=HMPREF3107_00570;product=multidrug transporter;protein_id=OFT04297.1;transl_table=11 KV790755.1 Genbank gene 56006 58657 . - . ID=gene-HMPREF3107_00575;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=HMPREF3107_00575 KV790755.1 Protein Homology CDS 56006 58657 . - 0 ID=cds-OFT04298.1;Parent=gene-HMPREF3107_00575;Dbxref=NCBI_GP:OFT04298.1;Name=OFT04298.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769850.1;locus_tag=HMPREF3107_00575;product=aminopeptidase N;protein_id=OFT04298.1;transl_table=11 KV790755.1 Genbank gene 58663 58845 . - . ID=gene-HMPREF3107_00580;Name=HMPREF3107_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00580 KV790755.1 GeneMarkS+ CDS 58663 58845 . - 0 ID=cds-OFT04299.1;Parent=gene-HMPREF3107_00580;Dbxref=NCBI_GP:OFT04299.1;Name=OFT04299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00580;product=hypothetical protein;protein_id=OFT04299.1;transl_table=11 KV790755.1 Genbank gene 58936 59880 . - . ID=gene-HMPREF3107_00585;Name=HMPREF3107_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00585 KV790755.1 GeneMarkS+ CDS 58936 59880 . - 0 ID=cds-OFT04300.1;Parent=gene-HMPREF3107_00585;Dbxref=NCBI_GP:OFT04300.1;Name=OFT04300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00585;product=hypothetical protein;protein_id=OFT04300.1;transl_table=11 KV790755.1 Genbank pseudogene 60074 60971 . - . ID=gene-HMPREF3107_00590;Name=HMPREF3107_00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00590;pseudo=true KV790755.1 Protein Homology CDS 60074 60971 . - 0 ID=cds-HMPREF3107_00590;Parent=gene-HMPREF3107_00590;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769855.1;locus_tag=HMPREF3107_00590;product=transporter;pseudo=true;transl_table=11 KV790755.1 Genbank gene 61154 61642 . - . ID=gene-HMPREF3107_00595;Name=HMPREF3107_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00595 KV790755.1 Protein Homology CDS 61154 61642 . - 0 ID=cds-OFT04301.1;Parent=gene-HMPREF3107_00595;Dbxref=NCBI_GP:OFT04301.1;Name=OFT04301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426857.1;locus_tag=HMPREF3107_00595;product=acetyltransferase;protein_id=OFT04301.1;transl_table=11 KV790755.1 Genbank gene 61951 62463 . + . ID=gene-HMPREF3107_00600;Name=HMPREF3107_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00600 KV790755.1 Protein Homology CDS 61951 62463 . + 0 ID=cds-OFT04259.1;Parent=gene-HMPREF3107_00600;Dbxref=NCBI_GP:OFT04259.1;Name=OFT04259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758322.1;locus_tag=HMPREF3107_00600;product=pantetheine-phosphate adenylyltransferase;protein_id=OFT04259.1;transl_table=11 KV790755.1 Genbank gene 62569 63858 . + . ID=gene-HMPREF3107_00605;Name=HMPREF3107_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00605 KV790755.1 Protein Homology CDS 62569 63858 . + 0 ID=cds-OFT04260.1;Parent=gene-HMPREF3107_00605;Dbxref=NCBI_GP:OFT04260.1;Name=OFT04260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769861.1;locus_tag=HMPREF3107_00605;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=OFT04260.1;transl_table=11 KV790755.1 Genbank gene 63848 64531 . + . ID=gene-HMPREF3107_00610;Name=HMPREF3107_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00610 KV790755.1 Protein Homology CDS 63848 64531 . + 0 ID=cds-OFT04261.1;Parent=gene-HMPREF3107_00610;Dbxref=NCBI_GP:OFT04261.1;Name=OFT04261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769863.1;locus_tag=HMPREF3107_00610;product=dethiobiotin synthase;protein_id=OFT04261.1;transl_table=11 KV790755.1 Genbank gene 64528 65079 . + . ID=gene-HMPREF3107_00615;Name=HMPREF3107_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00615 KV790755.1 Protein Homology CDS 64528 65079 . + 0 ID=cds-OFT04262.1;Parent=gene-HMPREF3107_00615;Dbxref=NCBI_GP:OFT04262.1;Name=OFT04262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714345.1;locus_tag=HMPREF3107_00615;product=DNA-3-methyladenine glycosylase;protein_id=OFT04262.1;transl_table=11 KV790755.1 Genbank gene 65133 66971 . - . ID=gene-HMPREF3107_00620;Name=HMPREF3107_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00620 KV790755.1 Protein Homology CDS 65133 66971 . - 0 ID=cds-OFT04263.1;Parent=gene-HMPREF3107_00620;Dbxref=NCBI_GP:OFT04263.1;Name=OFT04263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201253.1;locus_tag=HMPREF3107_00620;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=OFT04263.1;transl_table=11 KV790755.1 Genbank gene 67135 68508 . - . ID=gene-HMPREF3107_00625;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF3107_00625 KV790755.1 Protein Homology CDS 67135 68508 . - 0 ID=cds-OFT04264.1;Parent=gene-HMPREF3107_00625;Dbxref=NCBI_GP:OFT04264.1;Name=OFT04264.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687856.1;locus_tag=HMPREF3107_00625;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=OFT04264.1;transl_table=11 KV790755.1 Genbank gene 68605 68862 . - . ID=gene-HMPREF3107_00630;Name=HMPREF3107_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00630 KV790755.1 Protein Homology CDS 68605 68862 . - 0 ID=cds-OFT04265.1;Parent=gene-HMPREF3107_00630;Dbxref=NCBI_GP:OFT04265.1;Name=OFT04265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215237.1;locus_tag=HMPREF3107_00630;product=spore cortex protein;protein_id=OFT04265.1;transl_table=11 KV790755.1 Genbank gene 68973 69740 . - . ID=gene-HMPREF3107_00635;Name=HMPREF3107_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00635 KV790755.1 Protein Homology CDS 68973 69740 . - 0 ID=cds-OFT04266.1;Parent=gene-HMPREF3107_00635;Dbxref=NCBI_GP:OFT04266.1;Name=OFT04266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426217.1;locus_tag=HMPREF3107_00635;product=hypothetical protein;protein_id=OFT04266.1;transl_table=11 KV790755.1 Genbank gene 70025 70513 . + . ID=gene-HMPREF3107_00640;Name=HMPREF3107_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00640 KV790755.1 Protein Homology CDS 70025 70513 . + 0 ID=cds-OFT04267.1;Parent=gene-HMPREF3107_00640;Dbxref=NCBI_GP:OFT04267.1;Name=OFT04267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769882.1;locus_tag=HMPREF3107_00640;product=exclusion suppressor FxsA;protein_id=OFT04267.1;transl_table=11 KV790755.1 Genbank gene 70654 71781 . + . ID=gene-HMPREF3107_00645;Name=HMPREF3107_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00645 KV790755.1 Protein Homology CDS 70654 71781 . + 0 ID=cds-OFT04268.1;Parent=gene-HMPREF3107_00645;Dbxref=NCBI_GP:OFT04268.1;Name=OFT04268.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761069.1;locus_tag=HMPREF3107_00645;product=molecular chaperone DnaJ;protein_id=OFT04268.1;transl_table=11 KV790755.1 Genbank gene 71948 72250 . + . ID=gene-HMPREF3107_00650;Name=HMPREF3107_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00650 KV790755.1 GeneMarkS+ CDS 71948 72250 . + 0 ID=cds-OFT04269.1;Parent=gene-HMPREF3107_00650;Dbxref=NCBI_GP:OFT04269.1;Name=OFT04269.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00650;product=hypothetical protein;protein_id=OFT04269.1;transl_table=11 KV790755.1 Genbank gene 72287 73501 . + . ID=gene-HMPREF3107_00655;Name=HMPREF3107_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00655 KV790755.1 GeneMarkS+ CDS 72287 73501 . + 0 ID=cds-OFT04270.1;Parent=gene-HMPREF3107_00655;Dbxref=NCBI_GP:OFT04270.1;Name=OFT04270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00655;product=hypothetical protein;protein_id=OFT04270.1;transl_table=11 KV790755.1 Genbank gene 73640 74380 . + . ID=gene-HMPREF3107_00660;Name=HMPREF3107_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00660 KV790755.1 Protein Homology CDS 73640 74380 . + 0 ID=cds-OFT04279.1;Parent=gene-HMPREF3107_00660;Dbxref=NCBI_GP:OFT04279.1;Name=OFT04279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282821.1;locus_tag=HMPREF3107_00660;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=OFT04279.1;transl_table=11 KV790755.1 Genbank gene 74530 74763 . + . ID=gene-HMPREF3107_00665;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HMPREF3107_00665 KV790755.1 Protein Homology CDS 74530 74763 . + 0 ID=cds-OFT04271.1;Parent=gene-HMPREF3107_00665;Dbxref=NCBI_GP:OFT04271.1;Name=OFT04271.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=HMPREF3107_00665;product=50S ribosomal protein L28;protein_id=OFT04271.1;transl_table=11 KV790755.1 Genbank gene 74795 74950 . + . ID=gene-HMPREF3107_00670;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF3107_00670 KV790755.1 Protein Homology CDS 74795 74950 . + 0 ID=cds-OFT04272.1;Parent=gene-HMPREF3107_00670;Dbxref=NCBI_GP:OFT04272.1;Name=OFT04272.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012696028.1;locus_tag=HMPREF3107_00670;product=50S ribosomal protein L33;protein_id=OFT04272.1;transl_table=11 KV790755.1 Genbank gene 75354 75563 . + . ID=gene-HMPREF3107_00675;Name=HMPREF3107_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00675 KV790755.1 Protein Homology CDS 75354 75563 . + 0 ID=cds-OFT04273.1;Parent=gene-HMPREF3107_00675;Dbxref=NCBI_GP:OFT04273.1;Name=OFT04273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769892.1;locus_tag=HMPREF3107_00675;product=molybdenum-pterin-binding protein;protein_id=OFT04273.1;transl_table=11 KV790755.1 Genbank gene 75742 76629 . - . ID=gene-HMPREF3107_00680;Name=HMPREF3107_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00680 KV790755.1 Protein Homology CDS 75742 76629 . - 0 ID=cds-OFT04280.1;Parent=gene-HMPREF3107_00680;Dbxref=NCBI_GP:OFT04280.1;Name=OFT04280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824002.1;locus_tag=HMPREF3107_00680;product=LysR family transcriptional regulator;protein_id=OFT04280.1;transl_table=11 KV790755.1 Genbank gene 76818 77474 . + . ID=gene-HMPREF3107_00685;Name=HMPREF3107_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00685 KV790755.1 Protein Homology CDS 76818 77474 . + 0 ID=cds-OFT04274.1;Parent=gene-HMPREF3107_00685;Dbxref=NCBI_GP:OFT04274.1;Name=OFT04274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744778.1;locus_tag=HMPREF3107_00685;product=histidine kinase;protein_id=OFT04274.1;transl_table=11 KV790755.1 Genbank gene 77528 77707 . - . ID=gene-HMPREF3107_00690;Name=HMPREF3107_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00690 KV790755.1 GeneMarkS+ CDS 77528 77707 . - 0 ID=cds-OFT04275.1;Parent=gene-HMPREF3107_00690;Dbxref=NCBI_GP:OFT04275.1;Name=OFT04275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00690;product=hypothetical protein;protein_id=OFT04275.1;transl_table=11 KV790755.1 Genbank gene 77778 79340 . + . ID=gene-HMPREF3107_00695;Name=HMPREF3107_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00695 KV790755.1 Protein Homology CDS 77778 79340 . + 0 ID=cds-OFT04276.1;Parent=gene-HMPREF3107_00695;Dbxref=NCBI_GP:OFT04276.1;Name=OFT04276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282597.1;locus_tag=HMPREF3107_00695;product=hypothetical protein;protein_id=OFT04276.1;transl_table=11 KV790755.1 Genbank gene 79519 79594 . + . ID=gene-HMPREF3107_00700;Name=HMPREF3107_00700;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00700 KV790755.1 tRNAscan-SE tRNA 79519 79594 . + . ID=rna-HMPREF3107_00700;Parent=gene-HMPREF3107_00700;anticodon=(pos:79552..79554);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00700;product=tRNA-Asn KV790755.1 tRNAscan-SE exon 79519 79594 . + . ID=exon-HMPREF3107_00700-1;Parent=rna-HMPREF3107_00700;anticodon=(pos:79552..79554);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00700;product=tRNA-Asn KV790755.1 Genbank gene 79797 80015 . + . ID=gene-HMPREF3107_00705;Name=HMPREF3107_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00705 KV790755.1 Protein Homology CDS 79797 80015 . + 0 ID=cds-OFT04277.1;Parent=gene-HMPREF3107_00705;Dbxref=NCBI_GP:OFT04277.1;Name=OFT04277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311044.1;locus_tag=HMPREF3107_00705;product=cell division protein;protein_id=OFT04277.1;transl_table=11 KV790755.1 Genbank gene 80086 80775 . + . ID=gene-HMPREF3107_00710;Name=HMPREF3107_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00710 KV790755.1 Protein Homology CDS 80086 80775 . + 0 ID=cds-OFT04278.1;Parent=gene-HMPREF3107_00710;Dbxref=NCBI_GP:OFT04278.1;Name=OFT04278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769907.1;locus_tag=HMPREF3107_00710;product=hypothetical protein;protein_id=OFT04278.1;transl_table=11 KV790755.1 Genbank gene 80951 81040 . - . ID=gene-HMPREF3107_00715;Name=HMPREF3107_00715;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00715 KV790755.1 tRNAscan-SE tRNA 80951 81040 . - . ID=rna-HMPREF3107_00715;Parent=gene-HMPREF3107_00715;anticodon=(pos:complement(81004..81006));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00715;product=tRNA-Leu KV790755.1 tRNAscan-SE exon 80951 81040 . - . ID=exon-HMPREF3107_00715-1;Parent=rna-HMPREF3107_00715;anticodon=(pos:complement(81004..81006));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00715;product=tRNA-Leu KV790755.1 Genbank gene 81171 81244 . - . ID=gene-HMPREF3107_00720;Name=HMPREF3107_00720;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00720 KV790755.1 tRNAscan-SE tRNA 81171 81244 . - . ID=rna-HMPREF3107_00720;Parent=gene-HMPREF3107_00720;anticodon=(pos:complement(81210..81212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00720;product=tRNA-Cys KV790755.1 tRNAscan-SE exon 81171 81244 . - . ID=exon-HMPREF3107_00720-1;Parent=rna-HMPREF3107_00720;anticodon=(pos:complement(81210..81212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00720;product=tRNA-Cys KV790755.1 Genbank gene 81285 81360 . - . ID=gene-HMPREF3107_00725;Name=HMPREF3107_00725;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00725 KV790755.1 tRNAscan-SE tRNA 81285 81360 . - . ID=rna-HMPREF3107_00725;Parent=gene-HMPREF3107_00725;anticodon=(pos:complement(81325..81327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00725;product=tRNA-Gly KV790755.1 tRNAscan-SE exon 81285 81360 . - . ID=exon-HMPREF3107_00725-1;Parent=rna-HMPREF3107_00725;anticodon=(pos:complement(81325..81327));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00725;product=tRNA-Gly KV790755.1 Genbank gene 81383 81458 . - . ID=gene-HMPREF3107_00730;Name=HMPREF3107_00730;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00730 KV790755.1 tRNAscan-SE tRNA 81383 81458 . - . ID=rna-HMPREF3107_00730;Parent=gene-HMPREF3107_00730;anticodon=(pos:complement(81423..81425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00730;product=tRNA-Gly KV790755.1 tRNAscan-SE exon 81383 81458 . - . ID=exon-HMPREF3107_00730-1;Parent=rna-HMPREF3107_00730;anticodon=(pos:complement(81423..81425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00730;product=tRNA-Gly KV790755.1 Genbank gene 81645 82208 . - . ID=gene-HMPREF3107_00735;Name=HMPREF3107_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00735 KV790755.1 Protein Homology CDS 81645 82208 . - 0 ID=cds-OFT04198.1;Parent=gene-HMPREF3107_00735;Dbxref=NCBI_GP:OFT04198.1;Name=OFT04198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270169.1;locus_tag=HMPREF3107_00735;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=OFT04198.1;transl_table=11 KV790755.1 Genbank gene 82419 83234 . + . ID=gene-HMPREF3107_00740;Name=HMPREF3107_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00740 KV790755.1 Protein Homology CDS 82419 83234 . + 0 ID=cds-OFT04199.1;Parent=gene-HMPREF3107_00740;Dbxref=NCBI_GP:OFT04199.1;Name=OFT04199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685783.1;locus_tag=HMPREF3107_00740;product=squalene synthase HpnC;protein_id=OFT04199.1;transl_table=11 KV790755.1 Genbank gene 83284 84840 . + . ID=gene-HMPREF3107_00745;Name=HMPREF3107_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00745 KV790755.1 Protein Homology CDS 83284 84840 . + 0 ID=cds-OFT04200.1;Parent=gene-HMPREF3107_00745;Dbxref=NCBI_GP:OFT04200.1;Name=OFT04200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573924.1;locus_tag=HMPREF3107_00745;product=hypothetical protein;protein_id=OFT04200.1;transl_table=11 KV790755.1 Genbank gene 85011 87050 . - . ID=gene-HMPREF3107_00750;Name=HMPREF3107_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00750 KV790755.1 Protein Homology CDS 85011 87050 . - 0 ID=cds-OFT04201.1;Parent=gene-HMPREF3107_00750;Dbxref=NCBI_GP:OFT04201.1;Name=OFT04201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286145.1;locus_tag=HMPREF3107_00750;product=ATP-dependent DNA helicase RecG;protein_id=OFT04201.1;transl_table=11 KV790755.1 Genbank gene 87467 88912 . + . ID=gene-HMPREF3107_00755;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=HMPREF3107_00755 KV790755.1 Protein Homology CDS 87467 88912 . + 0 ID=cds-OFT04202.1;Parent=gene-HMPREF3107_00755;Dbxref=NCBI_GP:OFT04202.1;Name=OFT04202.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019390314.1;locus_tag=HMPREF3107_00755;product=metalloprotease TldD;protein_id=OFT04202.1;transl_table=11 ##sequence-region KV790756.1 1 29578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790756.1 Genbank region 1 29578 . + . ID=KV790756.1:1..29578;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790756.1 Genbank gene 172 441 . + . ID=gene-HMPREF3107_00760;Name=HMPREF3107_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00760 KV790756.1 GeneMarkS+ CDS 172 441 . + 0 ID=cds-OFT04132.1;Parent=gene-HMPREF3107_00760;Dbxref=NCBI_GP:OFT04132.1;Name=OFT04132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00760;product=hypothetical protein;protein_id=OFT04132.1;transl_table=11 KV790756.1 Genbank gene 470 1051 . + . ID=gene-HMPREF3107_00765;Name=HMPREF3107_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00765 KV790756.1 Protein Homology CDS 470 1051 . + 0 ID=cds-OFT04133.1;Parent=gene-HMPREF3107_00765;Dbxref=NCBI_GP:OFT04133.1;Name=OFT04133.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767156.1;locus_tag=HMPREF3107_00765;product=anthranilate synthase component 2;protein_id=OFT04133.1;transl_table=11 KV790756.1 Genbank gene 1082 1936 . + . ID=gene-HMPREF3107_00770;Name=HMPREF3107_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00770 KV790756.1 Protein Homology CDS 1082 1936 . + 0 ID=cds-OFT04134.1;Parent=gene-HMPREF3107_00770;Dbxref=NCBI_GP:OFT04134.1;Name=OFT04134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282944.1;locus_tag=HMPREF3107_00770;product=hypothetical protein;protein_id=OFT04134.1;transl_table=11 KV790756.1 Genbank gene 2196 2843 . - . ID=gene-HMPREF3107_00775;Name=HMPREF3107_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00775 KV790756.1 Protein Homology CDS 2196 2843 . - 0 ID=cds-OFT04135.1;Parent=gene-HMPREF3107_00775;Dbxref=NCBI_GP:OFT04135.1;Name=OFT04135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232195.1;locus_tag=HMPREF3107_00775;product=adenylate kinase;protein_id=OFT04135.1;transl_table=11 KV790756.1 Genbank gene 3096 3935 . + . ID=gene-HMPREF3107_00780;Name=HMPREF3107_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00780 KV790756.1 Protein Homology CDS 3096 3935 . + 0 ID=cds-OFT04154.1;Parent=gene-HMPREF3107_00780;Dbxref=NCBI_GP:OFT04154.1;Name=OFT04154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283926.1;locus_tag=HMPREF3107_00780;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=OFT04154.1;transl_table=11 KV790756.1 Genbank gene 3992 4513 . - . ID=gene-HMPREF3107_00785;Name=HMPREF3107_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00785 KV790756.1 GeneMarkS+ CDS 3992 4513 . - 0 ID=cds-OFT04136.1;Parent=gene-HMPREF3107_00785;Dbxref=NCBI_GP:OFT04136.1;Name=OFT04136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00785;product=hypothetical protein;protein_id=OFT04136.1;transl_table=11 KV790756.1 Genbank gene 4635 6011 . - . ID=gene-HMPREF3107_00790;Name=HMPREF3107_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00790 KV790756.1 Protein Homology CDS 4635 6011 . - 0 ID=cds-OFT04137.1;Parent=gene-HMPREF3107_00790;Dbxref=NCBI_GP:OFT04137.1;Name=OFT04137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213982.1;locus_tag=HMPREF3107_00790;product=phosphoglucomutase;protein_id=OFT04137.1;transl_table=11 KV790756.1 Genbank gene 6096 8150 . - . ID=gene-HMPREF3107_00795;Name=HMPREF3107_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00795 KV790756.1 Protein Homology CDS 6096 8150 . - 0 ID=cds-OFT04138.1;Parent=gene-HMPREF3107_00795;Dbxref=NCBI_GP:OFT04138.1;Name=OFT04138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685128.1;locus_tag=HMPREF3107_00795;product=lytic transglycosylase;protein_id=OFT04138.1;transl_table=11 KV790756.1 Genbank gene 8345 8977 . + . ID=gene-HMPREF3107_00800;Name=HMPREF3107_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00800 KV790756.1 Protein Homology CDS 8345 8977 . + 0 ID=cds-OFT04139.1;Parent=gene-HMPREF3107_00800;Dbxref=NCBI_GP:OFT04139.1;Name=OFT04139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774729.1;locus_tag=HMPREF3107_00800;product=generic methyl-transferase;protein_id=OFT04139.1;transl_table=11 KV790756.1 Genbank gene 9260 9559 . - . ID=gene-HMPREF3107_00805;Name=HMPREF3107_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00805 KV790756.1 Protein Homology CDS 9260 9559 . - 0 ID=cds-OFT04140.1;Parent=gene-HMPREF3107_00805;Dbxref=NCBI_GP:OFT04140.1;Name=OFT04140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774731.1;locus_tag=HMPREF3107_00805;product=hypothetical protein;protein_id=OFT04140.1;transl_table=11 KV790756.1 Genbank gene 9556 10275 . - . ID=gene-HMPREF3107_00810;Name=HMPREF3107_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00810 KV790756.1 Protein Homology CDS 9556 10275 . - 0 ID=cds-OFT04141.1;Parent=gene-HMPREF3107_00810;Dbxref=NCBI_GP:OFT04141.1;Name=OFT04141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774733.1;locus_tag=HMPREF3107_00810;product=branched-chain amino acid ABC transporter permease;protein_id=OFT04141.1;transl_table=11 KV790756.1 Genbank gene 10376 10879 . - . ID=gene-HMPREF3107_00815;Name=HMPREF3107_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00815 KV790756.1 Protein Homology CDS 10376 10879 . - 0 ID=cds-OFT04142.1;Parent=gene-HMPREF3107_00815;Dbxref=NCBI_GP:OFT04142.1;Name=OFT04142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778919.1;locus_tag=HMPREF3107_00815;product=hypothetical protein;protein_id=OFT04142.1;transl_table=11 KV790756.1 Genbank gene 11065 11751 . - . ID=gene-HMPREF3107_00820;Name=HMPREF3107_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00820 KV790756.1 Protein Homology CDS 11065 11751 . - 0 ID=cds-OFT04143.1;Parent=gene-HMPREF3107_00820;Dbxref=NCBI_GP:OFT04143.1;Name=OFT04143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774737.1;locus_tag=HMPREF3107_00820;product=TetR family transcriptional regulator;protein_id=OFT04143.1;transl_table=11 KV790756.1 Genbank gene 11828 13054 . - . ID=gene-HMPREF3107_00825;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=HMPREF3107_00825 KV790756.1 Protein Homology CDS 11828 13054 . - 0 ID=cds-OFT04144.1;Parent=gene-HMPREF3107_00825;Dbxref=NCBI_GP:OFT04144.1;Name=OFT04144.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774738.1;locus_tag=HMPREF3107_00825;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=OFT04144.1;transl_table=11 KV790756.1 Genbank gene 13410 13919 . - . ID=gene-HMPREF3107_00830;Name=HMPREF3107_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00830 KV790756.1 GeneMarkS+ CDS 13410 13919 . - 0 ID=cds-OFT04145.1;Parent=gene-HMPREF3107_00830;Dbxref=NCBI_GP:OFT04145.1;Name=OFT04145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00830;product=hypothetical protein;protein_id=OFT04145.1;transl_table=11 KV790756.1 Genbank gene 14115 15998 . - . ID=gene-HMPREF3107_00835;Name=HMPREF3107_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00835 KV790756.1 GeneMarkS+ CDS 14115 15998 . - 0 ID=cds-OFT04146.1;Parent=gene-HMPREF3107_00835;Dbxref=NCBI_GP:OFT04146.1;Name=OFT04146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00835;product=hypothetical protein;protein_id=OFT04146.1;transl_table=11 KV790756.1 Genbank gene 16057 17034 . - . ID=gene-HMPREF3107_00840;Name=HMPREF3107_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00840 KV790756.1 Protein Homology CDS 16057 17034 . - 0 ID=cds-OFT04147.1;Parent=gene-HMPREF3107_00840;Dbxref=NCBI_GP:OFT04147.1;Name=OFT04147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774743.1;locus_tag=HMPREF3107_00840;product=oxidoreductase;protein_id=OFT04147.1;transl_table=11 KV790756.1 Genbank gene 17372 18715 . + . ID=gene-HMPREF3107_00845;Name=HMPREF3107_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00845 KV790756.1 Protein Homology CDS 17372 18715 . + 0 ID=cds-OFT04148.1;Parent=gene-HMPREF3107_00845;Dbxref=NCBI_GP:OFT04148.1;Name=OFT04148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273049.1;locus_tag=HMPREF3107_00845;product=RNA helicase;protein_id=OFT04148.1;transl_table=11 KV790756.1 Genbank gene 19073 21658 . - . ID=gene-HMPREF3107_00850;Name=HMPREF3107_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00850 KV790756.1 Protein Homology CDS 19073 21658 . - 0 ID=cds-OFT04149.1;Parent=gene-HMPREF3107_00850;Dbxref=NCBI_GP:OFT04149.1;Name=OFT04149.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686102.1;locus_tag=HMPREF3107_00850;product=aconitate hydratase B;protein_id=OFT04149.1;transl_table=11 KV790756.1 Genbank gene 21989 22807 . - . ID=gene-HMPREF3107_00855;Name=HMPREF3107_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00855 KV790756.1 Protein Homology CDS 21989 22807 . - 0 ID=cds-OFT04150.1;Parent=gene-HMPREF3107_00855;Dbxref=NCBI_GP:OFT04150.1;Name=OFT04150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774758.1;locus_tag=HMPREF3107_00855;product=RNA methyltransferase;protein_id=OFT04150.1;transl_table=11 KV790756.1 Genbank gene 23482 24270 . + . ID=gene-HMPREF3107_00860;Name=HMPREF3107_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00860 KV790756.1 Protein Homology CDS 23482 24270 . + 0 ID=cds-OFT04151.1;Parent=gene-HMPREF3107_00860;Dbxref=NCBI_GP:OFT04151.1;Name=OFT04151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774762.1;locus_tag=HMPREF3107_00860;product=inositol monophosphatase;protein_id=OFT04151.1;transl_table=11 KV790756.1 Genbank gene 24515 26140 . - . ID=gene-HMPREF3107_00865;Name=HMPREF3107_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00865 KV790756.1 Protein Homology CDS 24515 26140 . - 0 ID=cds-OFT04152.1;Parent=gene-HMPREF3107_00865;Dbxref=NCBI_GP:OFT04152.1;Name=OFT04152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774765.1;locus_tag=HMPREF3107_00865;product=paraquat-inducible protein B;protein_id=OFT04152.1;transl_table=11 KV790756.1 Genbank gene 26499 27482 . + . ID=gene-HMPREF3107_00870;Name=HMPREF3107_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00870 KV790756.1 GeneMarkS+ CDS 26499 27482 . + 0 ID=cds-OFT04153.1;Parent=gene-HMPREF3107_00870;Dbxref=NCBI_GP:OFT04153.1;Name=OFT04153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00870;product=hypothetical protein;protein_id=OFT04153.1;transl_table=11 KV790756.1 Genbank pseudogene 27475 29578 . + . ID=gene-HMPREF3107_00875;Name=HMPREF3107_00875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00875;pseudo=true KV790756.1 GeneMarkS+ CDS 27475 29578 . + 0 ID=cds-HMPREF3107_00875;Parent=gene-HMPREF3107_00875;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00875;product=TonB-dependent receptor;pseudo=true;transl_table=11 ##sequence-region KV790757.1 1 18141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790757.1 Genbank region 1 18141 . + . ID=KV790757.1:1..18141;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790757.1 Genbank gene 28 216 . - . ID=gene-HMPREF3107_00880;Name=HMPREF3107_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00880 KV790757.1 GeneMarkS+ CDS 28 216 . - 0 ID=cds-OFT04031.1;Parent=gene-HMPREF3107_00880;Dbxref=NCBI_GP:OFT04031.1;Name=OFT04031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00880;product=hypothetical protein;protein_id=OFT04031.1;transl_table=11 KV790757.1 Genbank gene 404 796 . - . ID=gene-HMPREF3107_00885;Name=HMPREF3107_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00885 KV790757.1 Protein Homology CDS 404 796 . - 0 ID=cds-OFT04032.1;Parent=gene-HMPREF3107_00885;Dbxref=NCBI_GP:OFT04032.1;Name=OFT04032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004694783.1;locus_tag=HMPREF3107_00885;product=hypothetical protein;protein_id=OFT04032.1;transl_table=11 KV790757.1 Genbank gene 915 2159 . - . ID=gene-HMPREF3107_00890;Name=HMPREF3107_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00890 KV790757.1 Protein Homology CDS 915 2159 . - 0 ID=cds-OFT04033.1;Parent=gene-HMPREF3107_00890;Dbxref=NCBI_GP:OFT04033.1;Name=OFT04033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772795.1;locus_tag=HMPREF3107_00890;product=FAD-dependent oxidoreductase;protein_id=OFT04033.1;transl_table=11 KV790757.1 Genbank gene 2409 3758 . - . ID=gene-HMPREF3107_00895;Name=HMPREF3107_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00895 KV790757.1 Protein Homology CDS 2409 3758 . - 0 ID=cds-OFT04034.1;Parent=gene-HMPREF3107_00895;Dbxref=NCBI_GP:OFT04034.1;Name=OFT04034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824477.1;locus_tag=HMPREF3107_00895;product=hypothetical protein;protein_id=OFT04034.1;transl_table=11 KV790757.1 Genbank gene 3938 6250 . - . ID=gene-HMPREF3107_00900;Name=HMPREF3107_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00900 KV790757.1 Protein Homology CDS 3938 6250 . - 0 ID=cds-OFT04035.1;Parent=gene-HMPREF3107_00900;Dbxref=NCBI_GP:OFT04035.1;Name=OFT04035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824479.1;locus_tag=HMPREF3107_00900;product=hypothetical protein;protein_id=OFT04035.1;transl_table=11 KV790757.1 Genbank gene 6243 7898 . - . ID=gene-HMPREF3107_00905;Name=HMPREF3107_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00905 KV790757.1 Protein Homology CDS 6243 7898 . - 0 ID=cds-OFT04046.1;Parent=gene-HMPREF3107_00905;Dbxref=NCBI_GP:OFT04046.1;Name=OFT04046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746409.1;locus_tag=HMPREF3107_00905;product=hypothetical protein;protein_id=OFT04046.1;transl_table=11 KV790757.1 Genbank gene 8250 9323 . - . ID=gene-HMPREF3107_00910;Name=HMPREF3107_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00910 KV790757.1 Protein Homology CDS 8250 9323 . - 0 ID=cds-OFT04036.1;Parent=gene-HMPREF3107_00910;Dbxref=NCBI_GP:OFT04036.1;Name=OFT04036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771919.1;locus_tag=HMPREF3107_00910;product=multidrug transporter;protein_id=OFT04036.1;transl_table=11 KV790757.1 Genbank gene 9524 10420 . - . ID=gene-HMPREF3107_00915;Name=HMPREF3107_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00915 KV790757.1 Protein Homology CDS 9524 10420 . - 0 ID=cds-OFT04037.1;Parent=gene-HMPREF3107_00915;Dbxref=NCBI_GP:OFT04037.1;Name=OFT04037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771924.1;locus_tag=HMPREF3107_00915;product=4-hydroxybenzoate octaprenyltransferase;protein_id=OFT04037.1;transl_table=11 KV790757.1 Genbank gene 10685 10915 . + . ID=gene-HMPREF3107_00920;Name=HMPREF3107_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00920 KV790757.1 Protein Homology CDS 10685 10915 . + 0 ID=cds-OFT04047.1;Parent=gene-HMPREF3107_00920;Dbxref=NCBI_GP:OFT04047.1;Name=OFT04047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771925.1;locus_tag=HMPREF3107_00920;product=hypothetical protein;protein_id=OFT04047.1;transl_table=11 KV790757.1 Genbank gene 10940 11782 . - . ID=gene-HMPREF3107_00925;Name=HMPREF3107_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00925 KV790757.1 Protein Homology CDS 10940 11782 . - 0 ID=cds-OFT04038.1;Parent=gene-HMPREF3107_00925;Dbxref=NCBI_GP:OFT04038.1;Name=OFT04038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771929.1;locus_tag=HMPREF3107_00925;product=hypothetical protein;protein_id=OFT04038.1;transl_table=11 KV790757.1 Genbank gene 12020 12640 . + . ID=gene-HMPREF3107_00930;Name=HMPREF3107_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00930 KV790757.1 Protein Homology CDS 12020 12640 . + 0 ID=cds-OFT04039.1;Parent=gene-HMPREF3107_00930;Dbxref=NCBI_GP:OFT04039.1;Name=OFT04039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427224.1;locus_tag=HMPREF3107_00930;product=outer membrane lipoprotein carrier protein LolA;protein_id=OFT04039.1;transl_table=11 KV790757.1 Genbank gene 12750 13304 . + . ID=gene-HMPREF3107_00935;Name=HMPREF3107_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00935 KV790757.1 Protein Homology CDS 12750 13304 . + 0 ID=cds-OFT04040.1;Parent=gene-HMPREF3107_00935;Dbxref=NCBI_GP:OFT04040.1;Name=OFT04040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018678788.1;locus_tag=HMPREF3107_00935;product=NADH:ubiquinone oxidoreductase%2C Na;protein_id=OFT04040.1;transl_table=11 KV790757.1 Genbank pseudogene 13352 13534 . + . ID=gene-HMPREF3107_00940;Name=HMPREF3107_00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00940;pseudo=true KV790757.1 Protein Homology CDS 13352 13534 . + 0 ID=cds-HMPREF3107_00940;Parent=gene-HMPREF3107_00940;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747714.1;locus_tag=HMPREF3107_00940;product=methionine-binding protein;pseudo=true;transl_table=11 KV790757.1 Genbank gene 13852 13944 . + . ID=gene-HMPREF3107_00945;Name=HMPREF3107_00945;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00945 KV790757.1 tRNAscan-SE tRNA 13852 13944 . + . ID=rna-HMPREF3107_00945;Parent=gene-HMPREF3107_00945;anticodon=(pos:13886..13888);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00945;product=tRNA-Ser KV790757.1 tRNAscan-SE exon 13852 13944 . + . ID=exon-HMPREF3107_00945-1;Parent=rna-HMPREF3107_00945;anticodon=(pos:13886..13888);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00945;product=tRNA-Ser KV790757.1 Genbank gene 14007 15062 . + . ID=gene-HMPREF3107_00950;Name=HMPREF3107_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00950 KV790757.1 Protein Homology CDS 14007 15062 . + 0 ID=cds-OFT04041.1;Parent=gene-HMPREF3107_00950;Dbxref=NCBI_GP:OFT04041.1;Name=OFT04041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771935.1;locus_tag=HMPREF3107_00950;product=thiamine biosynthesis protein ApbE;protein_id=OFT04041.1;transl_table=11 KV790757.1 Genbank gene 15059 15271 . + . ID=gene-HMPREF3107_00955;Name=HMPREF3107_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00955 KV790757.1 Protein Homology CDS 15059 15271 . + 0 ID=cds-OFT04042.1;Parent=gene-HMPREF3107_00955;Dbxref=NCBI_GP:OFT04042.1;Name=OFT04042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214367.1;locus_tag=HMPREF3107_00955;product=hypothetical protein;protein_id=OFT04042.1;transl_table=11 KV790757.1 Genbank gene 15340 16341 . + . ID=gene-HMPREF3107_00960;Name=HMPREF3107_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00960 KV790757.1 Protein Homology CDS 15340 16341 . + 0 ID=cds-OFT04043.1;Parent=gene-HMPREF3107_00960;Dbxref=NCBI_GP:OFT04043.1;Name=OFT04043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284721.1;locus_tag=HMPREF3107_00960;product=DNA polymerase III subunit delta;protein_id=OFT04043.1;transl_table=11 KV790757.1 Genbank gene 16487 16945 . + . ID=gene-HMPREF3107_00965;Name=HMPREF3107_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00965 KV790757.1 Protein Homology CDS 16487 16945 . + 0 ID=cds-OFT04044.1;Parent=gene-HMPREF3107_00965;Dbxref=NCBI_GP:OFT04044.1;Name=OFT04044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771941.1;locus_tag=HMPREF3107_00965;product=hypothetical protein;protein_id=OFT04044.1;transl_table=11 KV790757.1 Genbank gene 17035 17535 . + . ID=gene-HMPREF3107_00970;Name=HMPREF3107_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00970 KV790757.1 Protein Homology CDS 17035 17535 . + 0 ID=cds-OFT04045.1;Parent=gene-HMPREF3107_00970;Dbxref=NCBI_GP:OFT04045.1;Name=OFT04045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771943.1;locus_tag=HMPREF3107_00970;product=hypothetical protein;protein_id=OFT04045.1;transl_table=11 KV790757.1 Genbank gene 17680 18018 . + . ID=gene-HMPREF3107_00975;Name=HMPREF3107_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00975 KV790757.1 Protein Homology CDS 17680 18018 . + 0 ID=cds-OFT04048.1;Parent=gene-HMPREF3107_00975;Dbxref=NCBI_GP:OFT04048.1;Name=OFT04048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341781.1;locus_tag=HMPREF3107_00975;product=hypothetical protein;protein_id=OFT04048.1;transl_table=11 ##sequence-region KV790758.1 1 981 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790758.1 Genbank region 1 981 . + . ID=KV790758.1:1..981;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790758.1 Genbank pseudogene 1 981 . + . ID=gene-HMPREF3107_00980;Name=HMPREF3107_00980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00980;pseudo=true KV790758.1 GeneMarkS+ CDS 1 981 . + 2 ID=cds-HMPREF3107_00980;Parent=gene-HMPREF3107_00980;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_00980;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790759.1 1 55728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790759.1 Genbank region 1 55728 . + . ID=KV790759.1:1..55728;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790759.1 Genbank pseudogene 1 233 . - . ID=gene-HMPREF3107_00985;Name=HMPREF3107_00985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_00985;pseudo=true KV790759.1 Protein Homology CDS 1 233 . - 0 ID=cds-HMPREF3107_00985;Parent=gene-HMPREF3107_00985;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146759.1;locus_tag=HMPREF3107_00985;product=hypothetical protein;pseudo=true;transl_table=11 KV790759.1 Genbank gene 435 1634 . - . ID=gene-HMPREF3107_00990;Name=HMPREF3107_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_00990 KV790759.1 Protein Homology CDS 435 1634 . - 0 ID=cds-OFT03986.1;Parent=gene-HMPREF3107_00990;Dbxref=NCBI_GP:OFT03986.1;Name=OFT03986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146746.1;locus_tag=HMPREF3107_00990;product=integrase;protein_id=OFT03986.1;transl_table=11 KV790759.1 Genbank gene 1805 1895 . - . ID=gene-HMPREF3107_00995;Name=HMPREF3107_00995;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_00995 KV790759.1 tRNAscan-SE tRNA 1805 1895 . - . ID=rna-HMPREF3107_00995;Parent=gene-HMPREF3107_00995;anticodon=(pos:complement(1859..1861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00995;product=tRNA-Ser KV790759.1 tRNAscan-SE exon 1805 1895 . - . ID=exon-HMPREF3107_00995-1;Parent=rna-HMPREF3107_00995;anticodon=(pos:complement(1859..1861));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_00995;product=tRNA-Ser KV790759.1 Genbank gene 2138 3517 . - . ID=gene-HMPREF3107_01000;Name=HMPREF3107_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01000 KV790759.1 Protein Homology CDS 2138 3517 . - 0 ID=cds-OFT03987.1;Parent=gene-HMPREF3107_01000;Dbxref=NCBI_GP:OFT03987.1;Name=OFT03987.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311883.1;locus_tag=HMPREF3107_01000;product=argininosuccinate lyase;protein_id=OFT03987.1;transl_table=11 KV790759.1 Genbank gene 3558 4607 . + . ID=gene-HMPREF3107_01005;Name=HMPREF3107_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01005 KV790759.1 Protein Homology CDS 3558 4607 . + 0 ID=cds-OFT03988.1;Parent=gene-HMPREF3107_01005;Dbxref=NCBI_GP:OFT03988.1;Name=OFT03988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755259.1;locus_tag=HMPREF3107_01005;product=histidine kinase;protein_id=OFT03988.1;transl_table=11 KV790759.1 Genbank gene 4734 5066 . + . ID=gene-HMPREF3107_01010;Name=HMPREF3107_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01010 KV790759.1 Protein Homology CDS 4734 5066 . + 0 ID=cds-OFT03989.1;Parent=gene-HMPREF3107_01010;Dbxref=NCBI_GP:OFT03989.1;Name=OFT03989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009857169.1;locus_tag=HMPREF3107_01010;product=thioredoxin;protein_id=OFT03989.1;transl_table=11 KV790759.1 Genbank gene 5183 5749 . - . ID=gene-HMPREF3107_01015;Name=HMPREF3107_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01015 KV790759.1 Protein Homology CDS 5183 5749 . - 0 ID=cds-OFT03990.1;Parent=gene-HMPREF3107_01015;Dbxref=NCBI_GP:OFT03990.1;Name=OFT03990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284906.1;locus_tag=HMPREF3107_01015;product=peptidylprolyl isomerase;protein_id=OFT03990.1;transl_table=11 KV790759.1 Genbank gene 5983 6417 . + . ID=gene-HMPREF3107_01020;Name=HMPREF3107_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01020 KV790759.1 Protein Homology CDS 5983 6417 . + 0 ID=cds-OFT03991.1;Parent=gene-HMPREF3107_01020;Dbxref=NCBI_GP:OFT03991.1;Name=OFT03991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770723.1;locus_tag=HMPREF3107_01020;product=pyruvate kinase;protein_id=OFT03991.1;transl_table=11 KV790759.1 Genbank gene 6479 6892 . + . ID=gene-HMPREF3107_01025;Name=HMPREF3107_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01025 KV790759.1 GeneMarkS+ CDS 6479 6892 . + 0 ID=cds-OFT03992.1;Parent=gene-HMPREF3107_01025;Dbxref=NCBI_GP:OFT03992.1;Name=OFT03992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01025;product=hypothetical protein;protein_id=OFT03992.1;transl_table=11 KV790759.1 Genbank gene 6980 7522 . + . ID=gene-HMPREF3107_01030;Name=HMPREF3107_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01030 KV790759.1 Protein Homology CDS 6980 7522 . + 0 ID=cds-OFT03993.1;Parent=gene-HMPREF3107_01030;Dbxref=NCBI_GP:OFT03993.1;Name=OFT03993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006216016.1;locus_tag=HMPREF3107_01030;product=5'-3'-deoxyribonucleotidase;protein_id=OFT03993.1;transl_table=11 KV790759.1 Genbank gene 7665 8393 . - . ID=gene-HMPREF3107_01035;Name=HMPREF3107_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01035 KV790759.1 Protein Homology CDS 7665 8393 . - 0 ID=cds-OFT03994.1;Parent=gene-HMPREF3107_01035;Dbxref=NCBI_GP:OFT03994.1;Name=OFT03994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770732.1;locus_tag=HMPREF3107_01035;product=ribonuclease III;protein_id=OFT03994.1;transl_table=11 KV790759.1 Genbank gene 8586 11003 . - . ID=gene-HMPREF3107_01040;Name=HMPREF3107_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01040 KV790759.1 Protein Homology CDS 8586 11003 . - 0 ID=cds-OFT03995.1;Parent=gene-HMPREF3107_01040;Dbxref=NCBI_GP:OFT03995.1;Name=OFT03995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770734.1;locus_tag=HMPREF3107_01040;product=transporter;protein_id=OFT03995.1;transl_table=11 KV790759.1 Genbank gene 11312 12106 . - . ID=gene-HMPREF3107_01045;Name=HMPREF3107_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01045 KV790759.1 Protein Homology CDS 11312 12106 . - 0 ID=cds-OFT03996.1;Parent=gene-HMPREF3107_01045;Dbxref=NCBI_GP:OFT03996.1;Name=OFT03996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770738.1;locus_tag=HMPREF3107_01045;product=ABC transporter ATP-binding protein;protein_id=OFT03996.1;transl_table=11 KV790759.1 Genbank gene 12103 13008 . - . ID=gene-HMPREF3107_01050;Name=HMPREF3107_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01050 KV790759.1 Protein Homology CDS 12103 13008 . - 0 ID=cds-OFT03997.1;Parent=gene-HMPREF3107_01050;Dbxref=NCBI_GP:OFT03997.1;Name=OFT03997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770739.1;locus_tag=HMPREF3107_01050;product=ABC transporter permease;protein_id=OFT03997.1;transl_table=11 KV790759.1 Genbank gene 13219 14244 . - . ID=gene-HMPREF3107_01055;Name=HMPREF3107_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01055 KV790759.1 Protein Homology CDS 13219 14244 . - 0 ID=cds-OFT03998.1;Parent=gene-HMPREF3107_01055;Dbxref=NCBI_GP:OFT03998.1;Name=OFT03998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425193.1;locus_tag=HMPREF3107_01055;product=ABC transporter substrate-binding protein;protein_id=OFT03998.1;transl_table=11 KV790759.1 Genbank gene 14345 14617 . - . ID=gene-HMPREF3107_01060;Name=HMPREF3107_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01060 KV790759.1 Protein Homology CDS 14345 14617 . - 0 ID=cds-OFT03999.1;Parent=gene-HMPREF3107_01060;Dbxref=NCBI_GP:OFT03999.1;Name=OFT03999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770747.1;locus_tag=HMPREF3107_01060;product=hypothetical protein;protein_id=OFT03999.1;transl_table=11 KV790759.1 Genbank gene 14696 18265 . - . ID=gene-HMPREF3107_01065;Name=HMPREF3107_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01065 KV790759.1 Protein Homology CDS 14696 18265 . - 0 ID=cds-OFT04000.1;Parent=gene-HMPREF3107_01065;Dbxref=NCBI_GP:OFT04000.1;Name=OFT04000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770749.1;locus_tag=HMPREF3107_01065;product=exodeoxyribonuclease V subunit beta;protein_id=OFT04000.1;transl_table=11 KV790759.1 Genbank gene 18404 18892 . + . ID=gene-HMPREF3107_01070;Name=HMPREF3107_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01070 KV790759.1 Protein Homology CDS 18404 18892 . + 0 ID=cds-OFT04001.1;Parent=gene-HMPREF3107_01070;Dbxref=NCBI_GP:OFT04001.1;Name=OFT04001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770752.1;locus_tag=HMPREF3107_01070;product=transcription elongation factor GreB;protein_id=OFT04001.1;transl_table=11 KV790759.1 Genbank gene 18965 19420 . - . ID=gene-HMPREF3107_01075;Name=HMPREF3107_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01075 KV790759.1 GeneMarkS+ CDS 18965 19420 . - 0 ID=cds-OFT04002.1;Parent=gene-HMPREF3107_01075;Dbxref=NCBI_GP:OFT04002.1;Name=OFT04002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01075;product=hypothetical protein;protein_id=OFT04002.1;transl_table=11 KV790759.1 Genbank gene 19513 20373 . - . ID=gene-HMPREF3107_01080;Name=HMPREF3107_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01080 KV790759.1 Protein Homology CDS 19513 20373 . - 0 ID=cds-OFT04004.1;Parent=gene-HMPREF3107_01080;Dbxref=NCBI_GP:OFT04004.1;Name=OFT04004.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449252.1;locus_tag=HMPREF3107_01080;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=OFT04004.1;transl_table=11 KV790759.1 Genbank gene 20577 21896 . - . ID=gene-HMPREF3107_01085;Name=HMPREF3107_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01085 KV790759.1 Protein Homology CDS 20577 21896 . - 0 ID=cds-OFT04003.1;Parent=gene-HMPREF3107_01085;Dbxref=NCBI_GP:OFT04003.1;Name=OFT04003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286002.1;locus_tag=HMPREF3107_01085;product=twitching motility protein PilT;protein_id=OFT04003.1;transl_table=11 KV790759.1 Genbank gene 22417 23205 . - . ID=gene-HMPREF3107_01090;Name=HMPREF3107_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01090 KV790759.1 Protein Homology CDS 22417 23205 . - 0 ID=cds-OFT03963.1;Parent=gene-HMPREF3107_01090;Dbxref=NCBI_GP:OFT03963.1;Name=OFT03963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242497.1;locus_tag=HMPREF3107_01090;product=laccase;protein_id=OFT03963.1;transl_table=11 KV790759.1 Genbank gene 23333 24082 . + . ID=gene-HMPREF3107_01095;Name=HMPREF3107_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01095 KV790759.1 Protein Homology CDS 23333 24082 . + 0 ID=cds-OFT03981.1;Parent=gene-HMPREF3107_01095;Dbxref=NCBI_GP:OFT03981.1;Name=OFT03981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687677.1;locus_tag=HMPREF3107_01095;product=hemolysin;protein_id=OFT03981.1;transl_table=11 KV790759.1 Genbank gene 24157 24903 . + . ID=gene-HMPREF3107_01100;Name=HMPREF3107_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01100 KV790759.1 Protein Homology CDS 24157 24903 . + 0 ID=cds-OFT03964.1;Parent=gene-HMPREF3107_01100;Dbxref=NCBI_GP:OFT03964.1;Name=OFT03964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774059.1;locus_tag=HMPREF3107_01100;product=acyltransferase;protein_id=OFT03964.1;transl_table=11 KV790759.1 Genbank gene 25291 27633 . + . ID=gene-HMPREF3107_01105;Name=HMPREF3107_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01105 KV790759.1 Protein Homology CDS 25291 27633 . + 0 ID=cds-OFT03965.1;Parent=gene-HMPREF3107_01105;Dbxref=NCBI_GP:OFT03965.1;Name=OFT03965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776773.1;locus_tag=HMPREF3107_01105;product=hemin receptor;protein_id=OFT03965.1;transl_table=11 KV790759.1 Genbank gene 27984 28601 . + . ID=gene-HMPREF3107_01110;Name=HMPREF3107_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01110 KV790759.1 Protein Homology CDS 27984 28601 . + 0 ID=cds-OFT03966.1;Parent=gene-HMPREF3107_01110;Dbxref=NCBI_GP:OFT03966.1;Name=OFT03966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425684.1;locus_tag=HMPREF3107_01110;product=heme oxygenase;protein_id=OFT03966.1;transl_table=11 KV790759.1 Genbank gene 28969 30501 . - . ID=gene-HMPREF3107_01115;Name=HMPREF3107_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01115 KV790759.1 Protein Homology CDS 28969 30501 . - 0 ID=cds-OFT03967.1;Parent=gene-HMPREF3107_01115;Dbxref=NCBI_GP:OFT03967.1;Name=OFT03967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285924.1;locus_tag=HMPREF3107_01115;product=MFS transporter;protein_id=OFT03967.1;transl_table=11 KV790759.1 Genbank gene 30699 31499 . - . ID=gene-HMPREF3107_01120;Name=HMPREF3107_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01120 KV790759.1 Protein Homology CDS 30699 31499 . - 0 ID=cds-OFT03968.1;Parent=gene-HMPREF3107_01120;Dbxref=NCBI_GP:OFT03968.1;Name=OFT03968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174582.1;locus_tag=HMPREF3107_01120;product=NTP pyrophosphohydrolase;protein_id=OFT03968.1;transl_table=11 KV790759.1 Genbank gene 31546 32646 . - . ID=gene-HMPREF3107_01125;Name=HMPREF3107_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01125 KV790759.1 Protein Homology CDS 31546 32646 . - 0 ID=cds-OFT03969.1;Parent=gene-HMPREF3107_01125;Dbxref=NCBI_GP:OFT03969.1;Name=OFT03969.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116719.1;locus_tag=HMPREF3107_01125;product=chorismate synthase;protein_id=OFT03969.1;transl_table=11 KV790759.1 Genbank gene 32810 34582 . - . ID=gene-HMPREF3107_01130;Name=HMPREF3107_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01130 KV790759.1 Protein Homology CDS 32810 34582 . - 0 ID=cds-OFT03982.1;Parent=gene-HMPREF3107_01130;Dbxref=NCBI_GP:OFT03982.1;Name=OFT03982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707572.1;locus_tag=HMPREF3107_01130;product=ABC transporter ATP-binding protein;protein_id=OFT03982.1;transl_table=11 KV790759.1 Genbank gene 34962 37250 . + . ID=gene-HMPREF3107_01135;Name=HMPREF3107_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01135 KV790759.1 Protein Homology CDS 34962 37250 . + 0 ID=cds-OFT03970.1;Parent=gene-HMPREF3107_01135;Dbxref=NCBI_GP:OFT03970.1;Name=OFT03970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685727.1;locus_tag=HMPREF3107_01135;product=ligand-gated channel protein;protein_id=OFT03970.1;transl_table=11 KV790759.1 Genbank gene 37613 38473 . - . ID=gene-HMPREF3107_01140;Name=HMPREF3107_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01140 KV790759.1 Protein Homology CDS 37613 38473 . - 0 ID=cds-OFT03971.1;Parent=gene-HMPREF3107_01140;Dbxref=NCBI_GP:OFT03971.1;Name=OFT03971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770366.1;locus_tag=HMPREF3107_01140;product=tellurite resistance methyltransferase TehB;protein_id=OFT03971.1;transl_table=11 KV790759.1 Genbank gene 38532 39986 . - . ID=gene-HMPREF3107_01145;Name=HMPREF3107_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01145 KV790759.1 Protein Homology CDS 38532 39986 . - 0 ID=cds-OFT03972.1;Parent=gene-HMPREF3107_01145;Dbxref=NCBI_GP:OFT03972.1;Name=OFT03972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284026.1;locus_tag=HMPREF3107_01145;product=potassium transporter Trk;protein_id=OFT03972.1;transl_table=11 KV790759.1 Genbank gene 40033 41427 . - . ID=gene-HMPREF3107_01150;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF3107_01150 KV790759.1 Protein Homology CDS 40033 41427 . - 0 ID=cds-OFT03973.1;Parent=gene-HMPREF3107_01150;Dbxref=NCBI_GP:OFT03973.1;Name=OFT03973.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740742.1;locus_tag=HMPREF3107_01150;product=potassium transporter peripheral membrane component;protein_id=OFT03973.1;transl_table=11 KV790759.1 Genbank gene 41573 41648 . - . ID=gene-HMPREF3107_01155;Name=HMPREF3107_01155;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01155 KV790759.1 tRNAscan-SE tRNA 41573 41648 . - . ID=rna-HMPREF3107_01155;Parent=gene-HMPREF3107_01155;anticodon=(pos:complement(41613..41615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01155;product=tRNA-Asn KV790759.1 tRNAscan-SE exon 41573 41648 . - . ID=exon-HMPREF3107_01155-1;Parent=rna-HMPREF3107_01155;anticodon=(pos:complement(41613..41615));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01155;product=tRNA-Asn KV790759.1 Genbank gene 41728 42270 . - . ID=gene-HMPREF3107_01160;Name=HMPREF3107_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01160 KV790759.1 Protein Homology CDS 41728 42270 . - 0 ID=cds-OFT03974.1;Parent=gene-HMPREF3107_01160;Dbxref=NCBI_GP:OFT03974.1;Name=OFT03974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770374.1;locus_tag=HMPREF3107_01160;product=type IV secretion protein Rhs;protein_id=OFT03974.1;transl_table=11 KV790759.1 Genbank gene 42269 42457 . + . ID=gene-HMPREF3107_01165;Name=HMPREF3107_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01165 KV790759.1 GeneMarkS+ CDS 42269 42457 . + 0 ID=cds-OFT03975.1;Parent=gene-HMPREF3107_01165;Dbxref=NCBI_GP:OFT03975.1;Name=OFT03975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01165;product=hypothetical protein;protein_id=OFT03975.1;transl_table=11 KV790759.1 Genbank gene 42454 43803 . + . ID=gene-HMPREF3107_01170;Name=HMPREF3107_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01170 KV790759.1 Protein Homology CDS 42454 43803 . + 0 ID=cds-OFT03976.1;Parent=gene-HMPREF3107_01170;Dbxref=NCBI_GP:OFT03976.1;Name=OFT03976.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770376.1;locus_tag=HMPREF3107_01170;product=GTP-binding protein;protein_id=OFT03976.1;transl_table=11 KV790759.1 Genbank gene 43934 46564 . + . ID=gene-HMPREF3107_01175;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF3107_01175 KV790759.1 Protein Homology CDS 43934 46564 . + 0 ID=cds-OFT03983.1;Parent=gene-HMPREF3107_01175;Dbxref=NCBI_GP:OFT03983.1;Name=OFT03983.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RNT1.1;locus_tag=HMPREF3107_01175;product=leucine--tRNA ligase;protein_id=OFT03983.1;transl_table=11 KV790759.1 Genbank gene 46651 47229 . + . ID=gene-HMPREF3107_01180;Name=HMPREF3107_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01180 KV790759.1 Protein Homology CDS 46651 47229 . + 0 ID=cds-OFT03977.1;Parent=gene-HMPREF3107_01180;Dbxref=NCBI_GP:OFT03977.1;Name=OFT03977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770384.1;locus_tag=HMPREF3107_01180;product=serine acetyltransferase;protein_id=OFT03977.1;transl_table=11 KV790759.1 Genbank gene 47269 48354 . + . ID=gene-HMPREF3107_01185;Name=HMPREF3107_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01185 KV790759.1 Protein Homology CDS 47269 48354 . + 0 ID=cds-OFT03984.1;Parent=gene-HMPREF3107_01185;Dbxref=NCBI_GP:OFT03984.1;Name=OFT03984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174615.1;locus_tag=HMPREF3107_01185;product=aminotransferase DegT;protein_id=OFT03984.1;transl_table=11 KV790759.1 Genbank gene 48477 48797 . + . ID=gene-HMPREF3107_01190;Name=HMPREF3107_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01190 KV790759.1 GeneMarkS+ CDS 48477 48797 . + 0 ID=cds-OFT03978.1;Parent=gene-HMPREF3107_01190;Dbxref=NCBI_GP:OFT03978.1;Name=OFT03978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01190;product=hypothetical protein;protein_id=OFT03978.1;transl_table=11 KV790759.1 Genbank gene 48861 50339 . + . ID=gene-HMPREF3107_01195;Name=HMPREF3107_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01195 KV790759.1 Protein Homology CDS 48861 50339 . + 0 ID=cds-OFT03979.1;Parent=gene-HMPREF3107_01195;Dbxref=NCBI_GP:OFT03979.1;Name=OFT03979.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245667.1;locus_tag=HMPREF3107_01195;product=3-octaprenyl-4-hydroxybenzoate decarboxylase;protein_id=OFT03979.1;transl_table=11 KV790759.1 Genbank gene 50458 50724 . - . ID=gene-HMPREF3107_01200;Name=HMPREF3107_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01200 KV790759.1 Protein Homology CDS 50458 50724 . - 0 ID=cds-OFT03980.1;Parent=gene-HMPREF3107_01200;Dbxref=NCBI_GP:OFT03980.1;Name=OFT03980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518970.1;locus_tag=HMPREF3107_01200;product=hypothetical protein;protein_id=OFT03980.1;transl_table=11 KV790759.1 Genbank pseudogene 50811 50992 . + . ID=gene-HMPREF3107_01205;Name=HMPREF3107_01205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01205;pseudo=true KV790759.1 GeneMarkS+ CDS 50811 50992 . + 0 ID=cds-HMPREF3107_01205;Parent=gene-HMPREF3107_01205;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01205;product=hypothetical protein;pseudo=true;transl_table=11 KV790759.1 Genbank gene 51223 51585 . + . ID=gene-HMPREF3107_01210;Name=HMPREF3107_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01210 KV790759.1 GeneMarkS+ CDS 51223 51585 . + 0 ID=cds-OFT03949.1;Parent=gene-HMPREF3107_01210;Dbxref=NCBI_GP:OFT03949.1;Name=OFT03949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01210;product=hypothetical protein;protein_id=OFT03949.1;transl_table=11 KV790759.1 Genbank gene 51836 53632 . - . ID=gene-HMPREF3107_01215;Name=HMPREF3107_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01215 KV790759.1 Protein Homology CDS 51836 53632 . - 0 ID=cds-OFT03950.1;Parent=gene-HMPREF3107_01215;Dbxref=NCBI_GP:OFT03950.1;Name=OFT03950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464453.1;locus_tag=HMPREF3107_01215;product=aminobenzoate synthetase;protein_id=OFT03950.1;transl_table=11 KV790759.1 Genbank gene 53878 54807 . + . ID=gene-HMPREF3107_01220;Name=HMPREF3107_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01220 KV790759.1 Protein Homology CDS 53878 54807 . + 0 ID=cds-OFT03951.1;Parent=gene-HMPREF3107_01220;Dbxref=NCBI_GP:OFT03951.1;Name=OFT03951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464452.1;locus_tag=HMPREF3107_01220;product=polyphosphate kinase 2;protein_id=OFT03951.1;transl_table=11 KV790759.1 Genbank gene 54936 55688 . + . ID=gene-HMPREF3107_01225;Name=HMPREF3107_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01225 KV790759.1 Protein Homology CDS 54936 55688 . + 0 ID=cds-OFT03952.1;Parent=gene-HMPREF3107_01225;Dbxref=NCBI_GP:OFT03952.1;Name=OFT03952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770411.1;locus_tag=HMPREF3107_01225;product=hypothetical protein;protein_id=OFT03952.1;transl_table=11 ##sequence-region KV790760.1 1 3903 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790760.1 Genbank region 1 3903 . + . ID=KV790760.1:1..3903;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790760.1 Genbank pseudogene 49 996 . - . ID=gene-HMPREF3107_01230;Name=HMPREF3107_01230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01230;pseudo=true KV790760.1 Protein Homology CDS 49 996 . - 0 ID=cds-HMPREF3107_01230;Parent=gene-HMPREF3107_01230;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824597.1;locus_tag=HMPREF3107_01230;product=two-component sensor histidine kinase;pseudo=true;transl_table=11 KV790760.1 Genbank gene 1146 1592 . - . ID=gene-HMPREF3107_01235;Name=HMPREF3107_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01235 KV790760.1 Protein Homology CDS 1146 1592 . - 0 ID=cds-OFT03942.1;Parent=gene-HMPREF3107_01235;Dbxref=NCBI_GP:OFT03942.1;Name=OFT03942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746726.1;locus_tag=HMPREF3107_01235;product=hypothetical protein;protein_id=OFT03942.1;transl_table=11 KV790760.1 Genbank gene 1729 2481 . - . ID=gene-HMPREF3107_01240;Name=HMPREF3107_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01240 KV790760.1 Protein Homology CDS 1729 2481 . - 0 ID=cds-OFT03944.1;Parent=gene-HMPREF3107_01240;Dbxref=NCBI_GP:OFT03944.1;Name=OFT03944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770023.1;locus_tag=HMPREF3107_01240;product=alpha/beta hydrolase;protein_id=OFT03944.1;transl_table=11 KV790760.1 Genbank gene 2719 2913 . - . ID=gene-HMPREF3107_01245;Name=HMPREF3107_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01245 KV790760.1 Protein Homology CDS 2719 2913 . - 0 ID=cds-OFT03943.1;Parent=gene-HMPREF3107_01245;Dbxref=NCBI_GP:OFT03943.1;Name=OFT03943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773432.1;locus_tag=HMPREF3107_01245;product=hypothetical protein;protein_id=OFT03943.1;transl_table=11 KV790760.1 Genbank pseudogene 3467 3903 . + . ID=gene-HMPREF3107_01250;Name=HMPREF3107_01250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01250;pseudo=true KV790760.1 Protein Homology CDS 3467 3903 . + 0 ID=cds-HMPREF3107_01250;Parent=gene-HMPREF3107_01250;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773425.1;locus_tag=HMPREF3107_01250;product=repressor;pseudo=true;transl_table=11 ##sequence-region KV790761.1 1 31810 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790761.1 Genbank region 1 31810 . + . ID=KV790761.1:1..31810;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790761.1 Genbank gene 162 1028 . - . ID=gene-HMPREF3107_01255;Name=HMPREF3107_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01255 KV790761.1 Protein Homology CDS 162 1028 . - 0 ID=cds-OFT03811.1;Parent=gene-HMPREF3107_01255;Dbxref=NCBI_GP:OFT03811.1;Name=OFT03811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXE3.1;locus_tag=HMPREF3107_01255;product=rRNA (cytidine-2'-O-)-methyltransferase;protein_id=OFT03811.1;transl_table=11 KV790761.1 Genbank gene 1236 1583 . + . ID=gene-HMPREF3107_01260;Name=HMPREF3107_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01260 KV790761.1 Protein Homology CDS 1236 1583 . + 0 ID=cds-OFT03812.1;Parent=gene-HMPREF3107_01260;Dbxref=NCBI_GP:OFT03812.1;Name=OFT03812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JWJ8.1;locus_tag=HMPREF3107_01260;product=hypothetical protein;protein_id=OFT03812.1;transl_table=11 KV790761.1 Genbank gene 1590 2183 . + . ID=gene-HMPREF3107_01265;Name=HMPREF3107_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01265 KV790761.1 Protein Homology CDS 1590 2183 . + 0 ID=cds-OFT03813.1;Parent=gene-HMPREF3107_01265;Dbxref=NCBI_GP:OFT03813.1;Name=OFT03813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686872.1;locus_tag=HMPREF3107_01265;product=phosphoheptose isomerase;protein_id=OFT03813.1;transl_table=11 KV790761.1 Genbank gene 2342 3484 . + . ID=gene-HMPREF3107_01270;Name=HMPREF3107_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01270 KV790761.1 Protein Homology CDS 2342 3484 . + 0 ID=cds-OFT03814.1;Parent=gene-HMPREF3107_01270;Dbxref=NCBI_GP:OFT03814.1;Name=OFT03814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683579.1;locus_tag=HMPREF3107_01270;product=DNA methylase;protein_id=OFT03814.1;transl_table=11 KV790761.1 Genbank gene 3618 4355 . + . ID=gene-HMPREF3107_01275;Name=HMPREF3107_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01275 KV790761.1 Protein Homology CDS 3618 4355 . + 0 ID=cds-OFT03815.1;Parent=gene-HMPREF3107_01275;Dbxref=NCBI_GP:OFT03815.1;Name=OFT03815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773551.1;locus_tag=HMPREF3107_01275;product=pseudouridylate synthase;protein_id=OFT03815.1;transl_table=11 KV790761.1 Genbank pseudogene 4510 4854 . + . ID=gene-HMPREF3107_01280;Name=HMPREF3107_01280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01280;pseudo=true KV790761.1 Protein Homology CDS 4510 4854 . + 0 ID=cds-HMPREF3107_01280;Parent=gene-HMPREF3107_01280;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174100.1;locus_tag=HMPREF3107_01280;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 KV790761.1 Genbank gene 4851 5471 . + . ID=gene-HMPREF3107_01285;Name=HMPREF3107_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01285 KV790761.1 Protein Homology CDS 4851 5471 . + 0 ID=cds-OFT03816.1;Parent=gene-HMPREF3107_01285;Dbxref=NCBI_GP:OFT03816.1;Name=OFT03816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174099.1;locus_tag=HMPREF3107_01285;product=glutathione S-transferase;protein_id=OFT03816.1;transl_table=11 KV790761.1 Genbank gene 5607 7295 . + . ID=gene-HMPREF3107_01290;Name=HMPREF3107_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01290 KV790761.1 Protein Homology CDS 5607 7295 . + 0 ID=cds-OFT03817.1;Parent=gene-HMPREF3107_01290;Dbxref=NCBI_GP:OFT03817.1;Name=OFT03817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118034.1;locus_tag=HMPREF3107_01290;product=glutamine--tRNA ligase;protein_id=OFT03817.1;transl_table=11 KV790761.1 Genbank gene 7379 8281 . + . ID=gene-HMPREF3107_01295;Name=HMPREF3107_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01295 KV790761.1 Protein Homology CDS 7379 8281 . + 0 ID=cds-OFT03818.1;Parent=gene-HMPREF3107_01295;Dbxref=NCBI_GP:OFT03818.1;Name=OFT03818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687401.1;locus_tag=HMPREF3107_01295;product=hypothetical protein;protein_id=OFT03818.1;transl_table=11 KV790761.1 Genbank gene 8342 8635 . - . ID=gene-HMPREF3107_01300;Name=HMPREF3107_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01300 KV790761.1 Protein Homology CDS 8342 8635 . - 0 ID=cds-OFT03819.1;Parent=gene-HMPREF3107_01300;Dbxref=NCBI_GP:OFT03819.1;Name=OFT03819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773569.1;locus_tag=HMPREF3107_01300;product=hypothetical protein;protein_id=OFT03819.1;transl_table=11 KV790761.1 Genbank gene 8927 9682 . + . ID=gene-HMPREF3107_01305;Name=HMPREF3107_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01305 KV790761.1 Protein Homology CDS 8927 9682 . + 0 ID=cds-OFT03820.1;Parent=gene-HMPREF3107_01305;Dbxref=NCBI_GP:OFT03820.1;Name=OFT03820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214323.1;locus_tag=HMPREF3107_01305;product=ABC transporter ATP-binding protein;protein_id=OFT03820.1;transl_table=11 KV790761.1 Genbank gene 9767 10642 . + . ID=gene-HMPREF3107_01310;Name=HMPREF3107_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01310 KV790761.1 Protein Homology CDS 9767 10642 . + 0 ID=cds-OFT03839.1;Parent=gene-HMPREF3107_01310;Dbxref=NCBI_GP:OFT03839.1;Name=OFT03839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747573.1;locus_tag=HMPREF3107_01310;product=zinc ABC transporter permease;protein_id=OFT03839.1;transl_table=11 KV790761.1 Genbank gene 10767 11669 . + . ID=gene-HMPREF3107_01315;Name=HMPREF3107_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01315 KV790761.1 Protein Homology CDS 10767 11669 . + 0 ID=cds-OFT03821.1;Parent=gene-HMPREF3107_01315;Dbxref=NCBI_GP:OFT03821.1;Name=OFT03821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270985.1;locus_tag=HMPREF3107_01315;product=ABC transporter substrate-binding protein;protein_id=OFT03821.1;transl_table=11 KV790761.1 Genbank gene 12038 12775 . + . ID=gene-HMPREF3107_01320;Name=HMPREF3107_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01320 KV790761.1 Protein Homology CDS 12038 12775 . + 0 ID=cds-OFT03822.1;Parent=gene-HMPREF3107_01320;Dbxref=NCBI_GP:OFT03822.1;Name=OFT03822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006227331.1;locus_tag=HMPREF3107_01320;product=ABC transporter ATP-binding protein;protein_id=OFT03822.1;transl_table=11 KV790761.1 Genbank gene 12777 13463 . + . ID=gene-HMPREF3107_01325;Name=HMPREF3107_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01325 KV790761.1 Protein Homology CDS 12777 13463 . + 0 ID=cds-OFT03823.1;Parent=gene-HMPREF3107_01325;Dbxref=NCBI_GP:OFT03823.1;Name=OFT03823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219875.1;locus_tag=HMPREF3107_01325;product=methionine ABC transporter ATP-binding protein;protein_id=OFT03823.1;transl_table=11 KV790761.1 Genbank gene 13781 14707 . + . ID=gene-HMPREF3107_01330;Name=HMPREF3107_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01330 KV790761.1 Protein Homology CDS 13781 14707 . + 0 ID=cds-OFT03824.1;Parent=gene-HMPREF3107_01330;Dbxref=NCBI_GP:OFT03824.1;Name=OFT03824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282775.1;locus_tag=HMPREF3107_01330;product=hypothetical protein;protein_id=OFT03824.1;transl_table=11 KV790761.1 Genbank gene 14779 16167 . - . ID=gene-HMPREF3107_01335;Name=HMPREF3107_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01335 KV790761.1 Protein Homology CDS 14779 16167 . - 0 ID=cds-OFT03825.1;Parent=gene-HMPREF3107_01335;Dbxref=NCBI_GP:OFT03825.1;Name=OFT03825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311574.1;locus_tag=HMPREF3107_01335;product=class II fumarate hydratase;protein_id=OFT03825.1;transl_table=11 KV790761.1 Genbank gene 16360 17604 . + . ID=gene-HMPREF3107_01340;Name=HMPREF3107_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01340 KV790761.1 Protein Homology CDS 16360 17604 . + 0 ID=cds-OFT03826.1;Parent=gene-HMPREF3107_01340;Dbxref=NCBI_GP:OFT03826.1;Name=OFT03826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341923.1;locus_tag=HMPREF3107_01340;product=nicotinate phosphoribosyltransferase;protein_id=OFT03826.1;transl_table=11 KV790761.1 Genbank gene 17645 18106 . + . ID=gene-HMPREF3107_01345;Name=HMPREF3107_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01345 KV790761.1 GeneMarkS+ CDS 17645 18106 . + 0 ID=cds-OFT03827.1;Parent=gene-HMPREF3107_01345;Dbxref=NCBI_GP:OFT03827.1;Name=OFT03827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01345;product=hypothetical protein;protein_id=OFT03827.1;transl_table=11 KV790761.1 Genbank gene 18176 19819 . + . ID=gene-HMPREF3107_01350;Name=HMPREF3107_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01350 KV790761.1 Protein Homology CDS 18176 19819 . + 0 ID=cds-OFT03840.1;Parent=gene-HMPREF3107_01350;Dbxref=NCBI_GP:OFT03840.1;Name=OFT03840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779108.1;locus_tag=HMPREF3107_01350;product=hypothetical protein;protein_id=OFT03840.1;transl_table=11 KV790761.1 Genbank gene 19907 21124 . - . ID=gene-HMPREF3107_01355;Name=HMPREF3107_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01355 KV790761.1 Protein Homology CDS 19907 21124 . - 0 ID=cds-OFT03828.1;Parent=gene-HMPREF3107_01355;Dbxref=NCBI_GP:OFT03828.1;Name=OFT03828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427384.1;locus_tag=HMPREF3107_01355;product=heme biosynthesis protein HemY;protein_id=OFT03828.1;transl_table=11 KV790761.1 Genbank gene 21121 22605 . - . ID=gene-HMPREF3107_01360;Name=HMPREF3107_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01360 KV790761.1 Protein Homology CDS 21121 22605 . - 0 ID=cds-OFT03842.1;Parent=gene-HMPREF3107_01360;Dbxref=NCBI_GP:OFT03842.1;Name=OFT03842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245525.1;locus_tag=HMPREF3107_01360;product=hypothetical protein;protein_id=OFT03842.1;transl_table=11 KV790761.1 Genbank gene 22650 23372 . - . ID=gene-HMPREF3107_01365;Name=HMPREF3107_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01365 KV790761.1 Protein Homology CDS 22650 23372 . - 0 ID=cds-OFT03841.1;Parent=gene-HMPREF3107_01365;Dbxref=NCBI_GP:OFT03841.1;Name=OFT03841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773602.1;locus_tag=HMPREF3107_01365;product=uroporphyrinogen-III synthase;protein_id=OFT03841.1;transl_table=11 KV790761.1 Genbank gene 23651 24589 . - . ID=gene-HMPREF3107_01370;Name=HMPREF3107_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01370 KV790761.1 Protein Homology CDS 23651 24589 . - 0 ID=cds-OFT03829.1;Parent=gene-HMPREF3107_01370;Dbxref=NCBI_GP:OFT03829.1;Name=OFT03829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773606.1;locus_tag=HMPREF3107_01370;product=hydroxymethylbilane synthase;protein_id=OFT03829.1;transl_table=11 KV790761.1 Genbank gene 24663 25112 . - . ID=gene-HMPREF3107_01375;Name=HMPREF3107_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01375 KV790761.1 Protein Homology CDS 24663 25112 . - 0 ID=cds-OFT03830.1;Parent=gene-HMPREF3107_01375;Dbxref=NCBI_GP:OFT03830.1;Name=OFT03830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773607.1;locus_tag=HMPREF3107_01375;product=Rrf2 family transcriptional regulator;protein_id=OFT03830.1;transl_table=11 KV790761.1 Genbank gene 25192 25560 . + . ID=gene-HMPREF3107_01380;Name=HMPREF3107_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01380 KV790761.1 Protein Homology CDS 25192 25560 . + 0 ID=cds-OFT03831.1;Parent=gene-HMPREF3107_01380;Dbxref=NCBI_GP:OFT03831.1;Name=OFT03831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773609.1;locus_tag=HMPREF3107_01380;product=hypothetical protein;protein_id=OFT03831.1;transl_table=11 KV790761.1 Genbank gene 25749 26261 . - . ID=gene-HMPREF3107_01385;Name=HMPREF3107_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01385 KV790761.1 Protein Homology CDS 25749 26261 . - 0 ID=cds-OFT03832.1;Parent=gene-HMPREF3107_01385;Dbxref=NCBI_GP:OFT03832.1;Name=OFT03832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426197.1;locus_tag=HMPREF3107_01385;product=cation-binding protein;protein_id=OFT03832.1;transl_table=11 KV790761.1 Genbank gene 26422 27009 . - . ID=gene-HMPREF3107_01390;Name=HMPREF3107_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01390 KV790761.1 Protein Homology CDS 26422 27009 . - 0 ID=cds-OFT03833.1;Parent=gene-HMPREF3107_01390;Dbxref=NCBI_GP:OFT03833.1;Name=OFT03833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773614.1;locus_tag=HMPREF3107_01390;product=azurin;protein_id=OFT03833.1;transl_table=11 KV790761.1 Genbank gene 27137 27583 . - . ID=gene-HMPREF3107_01395;Name=HMPREF3107_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01395 KV790761.1 Protein Homology CDS 27137 27583 . - 0 ID=cds-OFT03834.1;Parent=gene-HMPREF3107_01395;Dbxref=NCBI_GP:OFT03834.1;Name=OFT03834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773617.1;locus_tag=HMPREF3107_01395;product=hypothetical protein;protein_id=OFT03834.1;transl_table=11 KV790761.1 Genbank gene 27610 28410 . - . ID=gene-HMPREF3107_01400;Name=HMPREF3107_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01400 KV790761.1 Protein Homology CDS 27610 28410 . - 0 ID=cds-OFT03835.1;Parent=gene-HMPREF3107_01400;Dbxref=NCBI_GP:OFT03835.1;Name=OFT03835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773619.1;locus_tag=HMPREF3107_01400;product=damage-inducible protein CinA;protein_id=OFT03835.1;transl_table=11 KV790761.1 Genbank gene 28525 29874 . + . ID=gene-HMPREF3107_01405;Name=HMPREF3107_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01405 KV790761.1 Protein Homology CDS 28525 29874 . + 0 ID=cds-OFT03836.1;Parent=gene-HMPREF3107_01405;Dbxref=NCBI_GP:OFT03836.1;Name=OFT03836.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749378.1;locus_tag=HMPREF3107_01405;product=argininosuccinate synthase;protein_id=OFT03836.1;transl_table=11 KV790761.1 Genbank gene 30008 31210 . + . ID=gene-HMPREF3107_01410;Name=HMPREF3107_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01410 KV790761.1 Protein Homology CDS 30008 31210 . + 0 ID=cds-OFT03837.1;Parent=gene-HMPREF3107_01410;Dbxref=NCBI_GP:OFT03837.1;Name=OFT03837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270865.1;locus_tag=HMPREF3107_01410;product=tryptophan synthase subunit beta;protein_id=OFT03837.1;transl_table=11 KV790761.1 Genbank gene 31257 31810 . + . ID=gene-HMPREF3107_01415;Name=HMPREF3107_01415;end_range=31810,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01415;partial=true KV790761.1 Protein Homology CDS 31257 31810 . + 0 ID=cds-OFT03838.1;Parent=gene-HMPREF3107_01415;Dbxref=NCBI_GP:OFT03838.1;Name=OFT03838.1;end_range=31810,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776801.1;locus_tag=HMPREF3107_01415;partial=true;product=hypothetical protein;protein_id=OFT03838.1;transl_table=11 ##sequence-region KV790762.1 1 2355 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790762.1 Genbank region 1 2355 . + . ID=KV790762.1:1..2355;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790762.1 Genbank pseudogene 64 552 . - . ID=gene-HMPREF3107_01420;Name=HMPREF3107_01420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01420;pseudo=true KV790762.1 Protein Homology CDS 64 552 . - 0 ID=cds-HMPREF3107_01420;Parent=gene-HMPREF3107_01420;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311297.1;locus_tag=HMPREF3107_01420;product=hypothetical protein;pseudo=true;transl_table=11 KV790762.1 Genbank pseudogene 565 1458 . - . ID=gene-HMPREF3107_01425;Name=HMPREF3107_01425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01425;pseudo=true KV790762.1 Protein Homology CDS 565 1458 . - 0 ID=cds-HMPREF3107_01425;Parent=gene-HMPREF3107_01425;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311296.1;locus_tag=HMPREF3107_01425;product=type VI secretion protein Vgr;pseudo=true;transl_table=11 KV790762.1 Genbank gene 1712 2314 . + . ID=gene-HMPREF3107_01430;Name=HMPREF3107_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01430 KV790762.1 Protein Homology CDS 1712 2314 . + 0 ID=cds-OFT03802.1;Parent=gene-HMPREF3107_01430;Dbxref=NCBI_GP:OFT03802.1;Name=OFT03802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743435.1;locus_tag=HMPREF3107_01430;product=RHS family protein;protein_id=OFT03802.1;transl_table=11 ##sequence-region KV790763.1 1 31338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790763.1 Genbank region 1 31338 . + . ID=KV790763.1:1..31338;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790763.1 Genbank gene 79 153 . - . ID=gene-HMPREF3107_01435;Name=HMPREF3107_01435;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01435 KV790763.1 tRNAscan-SE tRNA 79 153 . - . ID=rna-HMPREF3107_01435;Parent=gene-HMPREF3107_01435;anticodon=(pos:complement(119..121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01435;product=tRNA-Thr KV790763.1 tRNAscan-SE exon 79 153 . - . ID=exon-HMPREF3107_01435-1;Parent=rna-HMPREF3107_01435;anticodon=(pos:complement(119..121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01435;product=tRNA-Thr KV790763.1 Genbank gene 163 236 . - . ID=gene-HMPREF3107_01440;Name=HMPREF3107_01440;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01440 KV790763.1 tRNAscan-SE tRNA 163 236 . - . ID=rna-HMPREF3107_01440;Parent=gene-HMPREF3107_01440;anticodon=(pos:complement(202..204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01440;product=tRNA-Gly KV790763.1 tRNAscan-SE exon 163 236 . - . ID=exon-HMPREF3107_01440-1;Parent=rna-HMPREF3107_01440;anticodon=(pos:complement(202..204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01440;product=tRNA-Gly KV790763.1 Genbank gene 273 356 . - . ID=gene-HMPREF3107_01445;Name=HMPREF3107_01445;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01445 KV790763.1 tRNAscan-SE tRNA 273 356 . - . ID=rna-HMPREF3107_01445;Parent=gene-HMPREF3107_01445;anticodon=(pos:complement(320..322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01445;product=tRNA-Tyr KV790763.1 tRNAscan-SE exon 273 356 . - . ID=exon-HMPREF3107_01445-1;Parent=rna-HMPREF3107_01445;anticodon=(pos:complement(320..322));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01445;product=tRNA-Tyr KV790763.1 Genbank gene 418 801 . + . ID=gene-HMPREF3107_01450;Name=HMPREF3107_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01450 KV790763.1 GeneMarkS+ CDS 418 801 . + 0 ID=cds-OFT03718.1;Parent=gene-HMPREF3107_01450;Dbxref=NCBI_GP:OFT03718.1;Name=OFT03718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01450;product=hypothetical protein;protein_id=OFT03718.1;transl_table=11 KV790763.1 Genbank gene 812 1381 . - . ID=gene-HMPREF3107_01455;Name=HMPREF3107_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01455 KV790763.1 Protein Homology CDS 812 1381 . - 0 ID=cds-OFT03743.1;Parent=gene-HMPREF3107_01455;Dbxref=NCBI_GP:OFT03743.1;Name=OFT03743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175239.1;locus_tag=HMPREF3107_01455;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=OFT03743.1;transl_table=11 KV790763.1 Genbank gene 1503 1889 . - . ID=gene-HMPREF3107_01460;Name=HMPREF3107_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01460 KV790763.1 Protein Homology CDS 1503 1889 . - 0 ID=cds-OFT03719.1;Parent=gene-HMPREF3107_01460;Dbxref=NCBI_GP:OFT03719.1;Name=OFT03719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284590.1;locus_tag=HMPREF3107_01460;product=transcriptional regulator;protein_id=OFT03719.1;transl_table=11 KV790763.1 Genbank gene 2047 2997 . + . ID=gene-HMPREF3107_01465;Name=HMPREF3107_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01465 KV790763.1 Protein Homology CDS 2047 2997 . + 0 ID=cds-OFT03720.1;Parent=gene-HMPREF3107_01465;Dbxref=NCBI_GP:OFT03720.1;Name=OFT03720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218555.1;locus_tag=HMPREF3107_01465;product=hypothetical protein;protein_id=OFT03720.1;transl_table=11 KV790763.1 Genbank gene 2994 3416 . + . ID=gene-HMPREF3107_01470;Name=HMPREF3107_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01470 KV790763.1 Protein Homology CDS 2994 3416 . + 0 ID=cds-OFT03721.1;Parent=gene-HMPREF3107_01470;Dbxref=NCBI_GP:OFT03721.1;Name=OFT03721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754397.1;locus_tag=HMPREF3107_01470;product=hypothetical protein;protein_id=OFT03721.1;transl_table=11 KV790763.1 Genbank gene 3748 6054 . - . ID=gene-HMPREF3107_01475;Name=HMPREF3107_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01475 KV790763.1 Protein Homology CDS 3748 6054 . - 0 ID=cds-OFT03722.1;Parent=gene-HMPREF3107_01475;Dbxref=NCBI_GP:OFT03722.1;Name=OFT03722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016670597.1;locus_tag=HMPREF3107_01475;product=DNA topoisomerase I;protein_id=OFT03722.1;transl_table=11 KV790763.1 Genbank gene 6188 6643 . - . ID=gene-HMPREF3107_01480;Name=HMPREF3107_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01480 KV790763.1 Protein Homology CDS 6188 6643 . - 0 ID=cds-OFT03723.1;Parent=gene-HMPREF3107_01480;Dbxref=NCBI_GP:OFT03723.1;Name=OFT03723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690295.1;locus_tag=HMPREF3107_01480;product=hypothetical protein;protein_id=OFT03723.1;transl_table=11 KV790763.1 Genbank gene 6683 7900 . - . ID=gene-HMPREF3107_01485;Name=HMPREF3107_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01485 KV790763.1 Protein Homology CDS 6683 7900 . - 0 ID=cds-OFT03724.1;Parent=gene-HMPREF3107_01485;Dbxref=NCBI_GP:OFT03724.1;Name=OFT03724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775241.1;locus_tag=HMPREF3107_01485;product=DNA processing protein DprA;protein_id=OFT03724.1;transl_table=11 KV790763.1 Genbank gene 8024 9874 . - . ID=gene-HMPREF3107_01490;Name=HMPREF3107_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01490 KV790763.1 Protein Homology CDS 8024 9874 . - 0 ID=cds-OFT03725.1;Parent=gene-HMPREF3107_01490;Dbxref=NCBI_GP:OFT03725.1;Name=OFT03725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775239.1;locus_tag=HMPREF3107_01490;product=multidrug ABC transporter ATP-binding protein;protein_id=OFT03725.1;transl_table=11 KV790763.1 Genbank gene 9937 10140 . + . ID=gene-HMPREF3107_01495;Name=HMPREF3107_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01495 KV790763.1 GeneMarkS+ CDS 9937 10140 . + 0 ID=cds-OFT03726.1;Parent=gene-HMPREF3107_01495;Dbxref=NCBI_GP:OFT03726.1;Name=OFT03726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01495;product=hypothetical protein;protein_id=OFT03726.1;transl_table=11 KV790763.1 Genbank gene 10266 11777 . - . ID=gene-HMPREF3107_01500;Name=HMPREF3107_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01500 KV790763.1 Protein Homology CDS 10266 11777 . - 0 ID=cds-OFT03727.1;Parent=gene-HMPREF3107_01500;Dbxref=NCBI_GP:OFT03727.1;Name=OFT03727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313040.1;locus_tag=HMPREF3107_01500;product=lysine--tRNA ligase;protein_id=OFT03727.1;transl_table=11 KV790763.1 Genbank gene 11935 13554 . - . ID=gene-HMPREF3107_01505;Name=HMPREF3107_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01505 KV790763.1 Protein Homology CDS 11935 13554 . - 0 ID=cds-OFT03728.1;Parent=gene-HMPREF3107_01505;Dbxref=NCBI_GP:OFT03728.1;Name=OFT03728.1;Note=sigma 54-dependent%3B regulates genes involved in forming a 2'%2C3'-cyclic phosphodiester on RNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775233.1;locus_tag=HMPREF3107_01505;product=transcriptional regulator;protein_id=OFT03728.1;transl_table=11 KV790763.1 Genbank gene 13568 14323 . - . ID=gene-HMPREF3107_01510;Name=HMPREF3107_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01510 KV790763.1 Protein Homology CDS 13568 14323 . - 0 ID=cds-OFT03729.1;Parent=gene-HMPREF3107_01510;Dbxref=NCBI_GP:OFT03729.1;Name=OFT03729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311869.1;locus_tag=HMPREF3107_01510;product=guanylyltransferase;protein_id=OFT03729.1;transl_table=11 KV790763.1 Genbank gene 14926 15390 . + . ID=gene-HMPREF3107_01515;Name=HMPREF3107_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01515 KV790763.1 Protein Homology CDS 14926 15390 . + 0 ID=cds-OFT03730.1;Parent=gene-HMPREF3107_01515;Dbxref=NCBI_GP:OFT03730.1;Name=OFT03730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764067.1;locus_tag=HMPREF3107_01515;product=hypothetical protein;protein_id=OFT03730.1;transl_table=11 KV790763.1 Genbank gene 15400 15774 . + . ID=gene-HMPREF3107_01520;Name=HMPREF3107_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01520 KV790763.1 Protein Homology CDS 15400 15774 . + 0 ID=cds-OFT03731.1;Parent=gene-HMPREF3107_01520;Dbxref=NCBI_GP:OFT03731.1;Name=OFT03731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003821739.1;locus_tag=HMPREF3107_01520;product=hypothetical protein;protein_id=OFT03731.1;transl_table=11 KV790763.1 Genbank gene 16280 17854 . + . ID=gene-HMPREF3107_01525;Name=HMPREF3107_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01525 KV790763.1 Protein Homology CDS 16280 17854 . + 0 ID=cds-OFT03732.1;Parent=gene-HMPREF3107_01525;Dbxref=NCBI_GP:OFT03732.1;Name=OFT03732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778254.1;locus_tag=HMPREF3107_01525;product=RNA-binding protein;protein_id=OFT03732.1;transl_table=11 KV790763.1 Genbank gene 17922 19079 . - . ID=gene-HMPREF3107_01530;Name=HMPREF3107_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01530 KV790763.1 Protein Homology CDS 17922 19079 . - 0 ID=cds-OFT03744.1;Parent=gene-HMPREF3107_01530;Dbxref=NCBI_GP:OFT03744.1;Name=OFT03744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678648.1;locus_tag=HMPREF3107_01530;product=hypothetical protein;protein_id=OFT03744.1;transl_table=11 KV790763.1 Genbank gene 19631 21109 . + . ID=gene-HMPREF3107_01535;Name=HMPREF3107_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01535 KV790763.1 Protein Homology CDS 19631 21109 . + 0 ID=cds-OFT03733.1;Parent=gene-HMPREF3107_01535;Dbxref=NCBI_GP:OFT03733.1;Name=OFT03733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678644.1;locus_tag=HMPREF3107_01535;product=2'-5' RNA ligase;protein_id=OFT03733.1;transl_table=11 KV790763.1 Genbank gene 21144 21761 . + . ID=gene-HMPREF3107_01540;Name=HMPREF3107_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01540 KV790763.1 Protein Homology CDS 21144 21761 . + 0 ID=cds-OFT03734.1;Parent=gene-HMPREF3107_01540;Dbxref=NCBI_GP:OFT03734.1;Name=OFT03734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760348.1;locus_tag=HMPREF3107_01540;product=hypothetical protein;protein_id=OFT03734.1;transl_table=11 KV790763.1 Genbank gene 21840 22283 . - . ID=gene-HMPREF3107_01545;Name=HMPREF3107_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01545 KV790763.1 Protein Homology CDS 21840 22283 . - 0 ID=cds-OFT03735.1;Parent=gene-HMPREF3107_01545;Dbxref=NCBI_GP:OFT03735.1;Name=OFT03735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762931.1;locus_tag=HMPREF3107_01545;product=D-erythrulose-4-phosphate isomerase 1;protein_id=OFT03735.1;transl_table=11 KV790763.1 Genbank gene 22395 23048 . + . ID=gene-HMPREF3107_01550;Name=HMPREF3107_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01550 KV790763.1 Protein Homology CDS 22395 23048 . + 0 ID=cds-OFT03736.1;Parent=gene-HMPREF3107_01550;Dbxref=NCBI_GP:OFT03736.1;Name=OFT03736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520016.1;locus_tag=HMPREF3107_01550;product=phosphoesterase;protein_id=OFT03736.1;transl_table=11 KV790763.1 Genbank gene 23272 24972 . + . ID=gene-HMPREF3107_01555;Name=HMPREF3107_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01555 KV790763.1 Protein Homology CDS 23272 24972 . + 0 ID=cds-OFT03737.1;Parent=gene-HMPREF3107_01555;Dbxref=NCBI_GP:OFT03737.1;Name=OFT03737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581495.1;locus_tag=HMPREF3107_01555;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=OFT03737.1;transl_table=11 KV790763.1 Genbank gene 25059 25490 . + . ID=gene-HMPREF3107_01560;Name=HMPREF3107_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01560 KV790763.1 Protein Homology CDS 25059 25490 . + 0 ID=cds-OFT03738.1;Parent=gene-HMPREF3107_01560;Dbxref=NCBI_GP:OFT03738.1;Name=OFT03738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775200.1;locus_tag=HMPREF3107_01560;product=hypothetical protein;protein_id=OFT03738.1;transl_table=11 KV790763.1 Genbank gene 25616 26416 . + . ID=gene-HMPREF3107_01565;Name=HMPREF3107_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01565 KV790763.1 Protein Homology CDS 25616 26416 . + 0 ID=cds-OFT03739.1;Parent=gene-HMPREF3107_01565;Dbxref=NCBI_GP:OFT03739.1;Name=OFT03739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775198.1;locus_tag=HMPREF3107_01565;product=dioxygenase;protein_id=OFT03739.1;transl_table=11 KV790763.1 Genbank gene 26499 27401 . + . ID=gene-HMPREF3107_01570;Name=HMPREF3107_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01570 KV790763.1 GeneMarkS+ CDS 26499 27401 . + 0 ID=cds-OFT03740.1;Parent=gene-HMPREF3107_01570;Dbxref=NCBI_GP:OFT03740.1;Name=OFT03740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01570;product=hypothetical protein;protein_id=OFT03740.1;transl_table=11 KV790763.1 Genbank gene 27760 29046 . - . ID=gene-HMPREF3107_01575;Name=HMPREF3107_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01575 KV790763.1 Protein Homology CDS 27760 29046 . - 0 ID=cds-OFT03741.1;Parent=gene-HMPREF3107_01575;Dbxref=NCBI_GP:OFT03741.1;Name=OFT03741.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174208.1;locus_tag=HMPREF3107_01575;product=glutamate-1-semialdehyde aminotransferase;protein_id=OFT03741.1;transl_table=11 KV790763.1 Genbank gene 29276 29977 . + . ID=gene-HMPREF3107_01580;Name=HMPREF3107_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01580 KV790763.1 Protein Homology CDS 29276 29977 . + 0 ID=cds-OFT03742.1;Parent=gene-HMPREF3107_01580;Dbxref=NCBI_GP:OFT03742.1;Name=OFT03742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683752.1;locus_tag=HMPREF3107_01580;product=hypothetical protein;protein_id=OFT03742.1;transl_table=11 KV790763.1 Genbank gene 30070 30939 . - . ID=gene-HMPREF3107_01585;Name=HMPREF3107_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01585 KV790763.1 Protein Homology CDS 30070 30939 . - 0 ID=cds-OFT03745.1;Parent=gene-HMPREF3107_01585;Dbxref=NCBI_GP:OFT03745.1;Name=OFT03745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341504.1;locus_tag=HMPREF3107_01585;product=endonuclease;protein_id=OFT03745.1;transl_table=11 KV790763.1 Genbank pseudogene 31087 31338 . + . ID=gene-HMPREF3107_01590;Name=HMPREF3107_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_01590;pseudo=true KV790763.1 GeneMarkS+ CDS 31087 31338 . + 0 ID=cds-HMPREF3107_01590;Parent=gene-HMPREF3107_01590;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01590;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790764.1 1 3947 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790764.1 Genbank region 1 3947 . + . ID=KV790764.1:1..3947;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790764.1 Genbank gene 68 748 . - . ID=gene-HMPREF3107_01595;Name=HMPREF3107_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01595 KV790764.1 Protein Homology CDS 68 748 . - 0 ID=cds-OFT03654.1;Parent=gene-HMPREF3107_01595;Dbxref=NCBI_GP:OFT03654.1;Name=OFT03654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174872.1;locus_tag=HMPREF3107_01595;product=DNA-binding response regulator;protein_id=OFT03654.1;transl_table=11 KV790764.1 Genbank gene 973 1599 . + . ID=gene-HMPREF3107_01600;Name=HMPREF3107_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01600 KV790764.1 Protein Homology CDS 973 1599 . + 0 ID=cds-OFT03655.1;Parent=gene-HMPREF3107_01600;Dbxref=NCBI_GP:OFT03655.1;Name=OFT03655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795834.1;locus_tag=HMPREF3107_01600;product=hypothetical protein;protein_id=OFT03655.1;transl_table=11 KV790764.1 Genbank gene 1658 2845 . - . ID=gene-HMPREF3107_01605;Name=HMPREF3107_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01605 KV790764.1 Protein Homology CDS 1658 2845 . - 0 ID=cds-OFT03651.1;Parent=gene-HMPREF3107_01605;Dbxref=NCBI_GP:OFT03651.1;Name=OFT03651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282840.1;locus_tag=HMPREF3107_01605;product=Bcr/CflA family drug resistance efflux transporter;protein_id=OFT03651.1;transl_table=11 KV790764.1 Genbank gene 3200 3403 . + . ID=gene-HMPREF3107_01610;Name=HMPREF3107_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01610 KV790764.1 Protein Homology CDS 3200 3403 . + 0 ID=cds-OFT03652.1;Parent=gene-HMPREF3107_01610;Dbxref=NCBI_GP:OFT03652.1;Name=OFT03652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006478030.1;locus_tag=HMPREF3107_01610;product=cold-shock protein;protein_id=OFT03652.1;transl_table=11 KV790764.1 Genbank gene 3500 3712 . + . ID=gene-HMPREF3107_01615;Name=HMPREF3107_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01615 KV790764.1 Protein Homology CDS 3500 3712 . + 0 ID=cds-OFT03653.1;Parent=gene-HMPREF3107_01615;Dbxref=NCBI_GP:OFT03653.1;Name=OFT03653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770036.1;locus_tag=HMPREF3107_01615;product=hypothetical protein;protein_id=OFT03653.1;transl_table=11 ##sequence-region KV790765.1 1 22964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790765.1 Genbank region 1 22964 . + . ID=KV790765.1:1..22964;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790765.1 Genbank gene 29 1039 . - . ID=gene-HMPREF3107_01620;Name=HMPREF3107_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01620 KV790765.1 GeneMarkS+ CDS 29 1039 . - 0 ID=cds-OFT03626.1;Parent=gene-HMPREF3107_01620;Dbxref=NCBI_GP:OFT03626.1;Name=OFT03626.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01620;product=poly-beta-1%2C6 N-acetyl-D-glucosamine synthase;protein_id=OFT03626.1;transl_table=11 KV790765.1 Genbank gene 1096 1428 . - . ID=gene-HMPREF3107_01625;Name=HMPREF3107_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01625 KV790765.1 Protein Homology CDS 1096 1428 . - 0 ID=cds-OFT03627.1;Parent=gene-HMPREF3107_01625;Dbxref=NCBI_GP:OFT03627.1;Name=OFT03627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218469.1;locus_tag=HMPREF3107_01625;product=alkylphosphonate utilization protein;protein_id=OFT03627.1;transl_table=11 KV790765.1 Genbank gene 1646 3709 . - . ID=gene-HMPREF3107_01630;Name=HMPREF3107_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01630 KV790765.1 Protein Homology CDS 1646 3709 . - 0 ID=cds-OFT03628.1;Parent=gene-HMPREF3107_01630;Dbxref=NCBI_GP:OFT03628.1;Name=OFT03628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285752.1;locus_tag=HMPREF3107_01630;product=methionine--tRNA ligase;protein_id=OFT03628.1;transl_table=11 KV790765.1 Genbank gene 3844 4518 . - . ID=gene-HMPREF3107_01635;Name=HMPREF3107_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01635 KV790765.1 Protein Homology CDS 3844 4518 . - 0 ID=cds-OFT03629.1;Parent=gene-HMPREF3107_01635;Dbxref=NCBI_GP:OFT03629.1;Name=OFT03629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774795.1;locus_tag=HMPREF3107_01635;product=peptidase M50;protein_id=OFT03629.1;transl_table=11 KV790765.1 Genbank gene 4576 5292 . - . ID=gene-HMPREF3107_01640;Name=HMPREF3107_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01640 KV790765.1 GeneMarkS+ CDS 4576 5292 . - 0 ID=cds-OFT03630.1;Parent=gene-HMPREF3107_01640;Dbxref=NCBI_GP:OFT03630.1;Name=OFT03630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01640;product=hypothetical protein;protein_id=OFT03630.1;transl_table=11 KV790765.1 Genbank gene 5327 5947 . - . ID=gene-HMPREF3107_01645;Name=HMPREF3107_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01645 KV790765.1 Protein Homology CDS 5327 5947 . - 0 ID=cds-OFT03631.1;Parent=gene-HMPREF3107_01645;Dbxref=NCBI_GP:OFT03631.1;Name=OFT03631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680049.1;locus_tag=HMPREF3107_01645;product=threonylcarbamoyl-AMP synthase;protein_id=OFT03631.1;transl_table=11 KV790765.1 Genbank gene 6051 6644 . + . ID=gene-HMPREF3107_01650;Name=HMPREF3107_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01650 KV790765.1 Protein Homology CDS 6051 6644 . + 0 ID=cds-OFT03632.1;Parent=gene-HMPREF3107_01650;Dbxref=NCBI_GP:OFT03632.1;Name=OFT03632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774801.1;locus_tag=HMPREF3107_01650;product=protein-tyrosine-phosphatase;protein_id=OFT03632.1;transl_table=11 KV790765.1 Genbank gene 6734 6809 . + . ID=gene-HMPREF3107_01655;Name=HMPREF3107_01655;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01655 KV790765.1 tRNAscan-SE tRNA 6734 6809 . + . ID=rna-HMPREF3107_01655;Parent=gene-HMPREF3107_01655;anticodon=(pos:6767..6769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01655;product=tRNA-Lys KV790765.1 tRNAscan-SE exon 6734 6809 . + . ID=exon-HMPREF3107_01655-1;Parent=rna-HMPREF3107_01655;anticodon=(pos:6767..6769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01655;product=tRNA-Lys KV790765.1 Genbank gene 7113 7589 . + . ID=gene-HMPREF3107_01660;Name=HMPREF3107_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01660 KV790765.1 Protein Homology CDS 7113 7589 . + 0 ID=cds-OFT03633.1;Parent=gene-HMPREF3107_01660;Dbxref=NCBI_GP:OFT03633.1;Name=OFT03633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686342.1;locus_tag=HMPREF3107_01660;product=transcription elongation factor GreA;protein_id=OFT03633.1;transl_table=11 KV790765.1 Genbank gene 7694 7957 . + . ID=gene-HMPREF3107_01665;Name=HMPREF3107_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01665 KV790765.1 Protein Homology CDS 7694 7957 . + 0 ID=cds-OFT03634.1;Parent=gene-HMPREF3107_01665;Dbxref=NCBI_GP:OFT03634.1;Name=OFT03634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774806.1;locus_tag=HMPREF3107_01665;product=RNA chaperone Hfq;protein_id=OFT03634.1;transl_table=11 KV790765.1 Genbank gene 8276 9730 . + . ID=gene-HMPREF3107_01670;Name=HMPREF3107_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01670 KV790765.1 Protein Homology CDS 8276 9730 . + 0 ID=cds-OFT03635.1;Parent=gene-HMPREF3107_01670;Dbxref=NCBI_GP:OFT03635.1;Name=OFT03635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218534.1;locus_tag=HMPREF3107_01670;product=pyruvate kinase;protein_id=OFT03635.1;transl_table=11 KV790765.1 Genbank gene 10001 11155 . + . ID=gene-HMPREF3107_01675;Name=HMPREF3107_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01675 KV790765.1 Protein Homology CDS 10001 11155 . + 0 ID=cds-OFT03636.1;Parent=gene-HMPREF3107_01675;Dbxref=NCBI_GP:OFT03636.1;Name=OFT03636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5D9.1;locus_tag=HMPREF3107_01675;product=GTPase ObgE;protein_id=OFT03636.1;transl_table=11 KV790765.1 Genbank gene 11235 11423 . + . ID=gene-HMPREF3107_01680;Name=HMPREF3107_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01680 KV790765.1 Protein Homology CDS 11235 11423 . + 0 ID=cds-OFT03637.1;Parent=gene-HMPREF3107_01680;Dbxref=NCBI_GP:OFT03637.1;Name=OFT03637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681797.1;locus_tag=HMPREF3107_01680;product=hypothetical protein;protein_id=OFT03637.1;transl_table=11 KV790765.1 Genbank gene 11404 12018 . + . ID=gene-HMPREF3107_01685;Name=HMPREF3107_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01685 KV790765.1 Protein Homology CDS 11404 12018 . + 0 ID=cds-OFT03638.1;Parent=gene-HMPREF3107_01685;Dbxref=NCBI_GP:OFT03638.1;Name=OFT03638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741445.1;locus_tag=HMPREF3107_01685;product=hypothetical protein;protein_id=OFT03638.1;transl_table=11 KV790765.1 Genbank gene 12086 13507 . + . ID=gene-HMPREF3107_01690;Name=HMPREF3107_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01690 KV790765.1 Protein Homology CDS 12086 13507 . + 0 ID=cds-OFT03639.1;Parent=gene-HMPREF3107_01690;Dbxref=NCBI_GP:OFT03639.1;Name=OFT03639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXE6.1;locus_tag=HMPREF3107_01690;product=cysteine--tRNA ligase;protein_id=OFT03639.1;transl_table=11 KV790765.1 Genbank gene 13578 14282 . - . ID=gene-HMPREF3107_01695;Name=HMPREF3107_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01695 KV790765.1 Protein Homology CDS 13578 14282 . - 0 ID=cds-OFT03640.1;Parent=gene-HMPREF3107_01695;Dbxref=NCBI_GP:OFT03640.1;Name=OFT03640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774824.1;locus_tag=HMPREF3107_01695;product=hypothetical protein;protein_id=OFT03640.1;transl_table=11 KV790765.1 Genbank gene 14372 15103 . - . ID=gene-HMPREF3107_01700;Name=HMPREF3107_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01700 KV790765.1 Protein Homology CDS 14372 15103 . - 0 ID=cds-OFT03641.1;Parent=gene-HMPREF3107_01700;Dbxref=NCBI_GP:OFT03641.1;Name=OFT03641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774826.1;locus_tag=HMPREF3107_01700;product=hypothetical protein;protein_id=OFT03641.1;transl_table=11 KV790765.1 Genbank gene 15691 16518 . - . ID=gene-HMPREF3107_01705;Name=HMPREF3107_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01705 KV790765.1 GeneMarkS+ CDS 15691 16518 . - 0 ID=cds-OFT03642.1;Parent=gene-HMPREF3107_01705;Dbxref=NCBI_GP:OFT03642.1;Name=OFT03642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01705;product=hypothetical protein;protein_id=OFT03642.1;transl_table=11 KV790765.1 Genbank gene 16627 17109 . - . ID=gene-HMPREF3107_01710;Name=HMPREF3107_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01710 KV790765.1 GeneMarkS+ CDS 16627 17109 . - 0 ID=cds-OFT03643.1;Parent=gene-HMPREF3107_01710;Dbxref=NCBI_GP:OFT03643.1;Name=OFT03643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01710;product=hypothetical protein;protein_id=OFT03643.1;transl_table=11 KV790765.1 Genbank gene 17184 17552 . - . ID=gene-HMPREF3107_01715;Name=HMPREF3107_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01715 KV790765.1 Protein Homology CDS 17184 17552 . - 0 ID=cds-OFT03644.1;Parent=gene-HMPREF3107_01715;Dbxref=NCBI_GP:OFT03644.1;Name=OFT03644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778388.1;locus_tag=HMPREF3107_01715;product=hypothetical protein;protein_id=OFT03644.1;transl_table=11 KV790765.1 Genbank gene 17606 18721 . - . ID=gene-HMPREF3107_01720;Name=HMPREF3107_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01720 KV790765.1 Protein Homology CDS 17606 18721 . - 0 ID=cds-OFT03645.1;Parent=gene-HMPREF3107_01720;Dbxref=NCBI_GP:OFT03645.1;Name=OFT03645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357167.1;locus_tag=HMPREF3107_01720;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=OFT03645.1;transl_table=11 KV790765.1 Genbank gene 18945 20579 . - . ID=gene-HMPREF3107_01725;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=HMPREF3107_01725 KV790765.1 Protein Homology CDS 18945 20579 . - 0 ID=cds-OFT03649.1;Parent=gene-HMPREF3107_01725;Dbxref=NCBI_GP:OFT03649.1;Name=OFT03649.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271863.1;locus_tag=HMPREF3107_01725;product=molecular chaperone GroEL;protein_id=OFT03649.1;transl_table=11 KV790765.1 Genbank gene 20677 20964 . - . ID=gene-HMPREF3107_01730;Name=HMPREF3107_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01730 KV790765.1 Protein Homology CDS 20677 20964 . - 0 ID=cds-OFT03646.1;Parent=gene-HMPREF3107_01730;Dbxref=NCBI_GP:OFT03646.1;Name=OFT03646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270883.1;locus_tag=HMPREF3107_01730;product=co-chaperone GroES;protein_id=OFT03646.1;transl_table=11 KV790765.1 Genbank gene 21159 21743 . - . ID=gene-HMPREF3107_01735;Name=HMPREF3107_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01735 KV790765.1 Protein Homology CDS 21159 21743 . - 0 ID=cds-OFT03647.1;Parent=gene-HMPREF3107_01735;Dbxref=NCBI_GP:OFT03647.1;Name=OFT03647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774862.1;locus_tag=HMPREF3107_01735;product=GTP cyclohydrolase II;protein_id=OFT03647.1;transl_table=11 KV790765.1 Genbank gene 21736 22386 . - . ID=gene-HMPREF3107_01740;Name=HMPREF3107_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01740 KV790765.1 Protein Homology CDS 21736 22386 . - 0 ID=cds-OFT03648.1;Parent=gene-HMPREF3107_01740;Dbxref=NCBI_GP:OFT03648.1;Name=OFT03648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774864.1;locus_tag=HMPREF3107_01740;product=hypothetical protein;protein_id=OFT03648.1;transl_table=11 KV790765.1 Genbank gene 22562 22646 . + . ID=gene-HMPREF3107_01745;Name=HMPREF3107_01745;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01745 KV790765.1 tRNAscan-SE tRNA 22562 22646 . + . ID=rna-HMPREF3107_01745;Parent=gene-HMPREF3107_01745;anticodon=(pos:22596..22598);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01745;product=tRNA-Leu KV790765.1 tRNAscan-SE exon 22562 22646 . + . ID=exon-HMPREF3107_01745-1;Parent=rna-HMPREF3107_01745;anticodon=(pos:22596..22598);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01745;product=tRNA-Leu ##sequence-region KV790766.1 1 25976 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790766.1 Genbank region 1 25976 . + . ID=KV790766.1:1..25976;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790766.1 Genbank gene 503 1192 . + . ID=gene-HMPREF3107_01750;Name=HMPREF3107_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01750 KV790766.1 Protein Homology CDS 503 1192 . + 0 ID=cds-OFT03525.1;Parent=gene-HMPREF3107_01750;Dbxref=NCBI_GP:OFT03525.1;Name=OFT03525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342343.1;locus_tag=HMPREF3107_01750;product=hypothetical protein;protein_id=OFT03525.1;transl_table=11 KV790766.1 Genbank gene 1426 2499 . + . ID=gene-HMPREF3107_01755;Name=HMPREF3107_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01755 KV790766.1 Protein Homology CDS 1426 2499 . + 0 ID=cds-OFT03526.1;Parent=gene-HMPREF3107_01755;Dbxref=NCBI_GP:OFT03526.1;Name=OFT03526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774926.1;locus_tag=HMPREF3107_01755;product=histidinol-phosphate aminotransferase;protein_id=OFT03526.1;transl_table=11 KV790766.1 Genbank gene 2505 3407 . + . ID=gene-HMPREF3107_01760;Name=HMPREF3107_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01760 KV790766.1 Protein Homology CDS 2505 3407 . + 0 ID=cds-OFT03527.1;Parent=gene-HMPREF3107_01760;Dbxref=NCBI_GP:OFT03527.1;Name=OFT03527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748659.1;locus_tag=HMPREF3107_01760;product=imidazoleglycerol-phosphate dehydratase;protein_id=OFT03527.1;transl_table=11 KV790766.1 Genbank gene 3507 3686 . - . ID=gene-HMPREF3107_01765;Name=HMPREF3107_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01765 KV790766.1 GeneMarkS+ CDS 3507 3686 . - 0 ID=cds-OFT03528.1;Parent=gene-HMPREF3107_01765;Dbxref=NCBI_GP:OFT03528.1;Name=OFT03528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_01765;product=hypothetical protein;protein_id=OFT03528.1;transl_table=11 KV790766.1 Genbank gene 3765 4958 . + . ID=gene-HMPREF3107_01770;Name=HMPREF3107_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01770 KV790766.1 Protein Homology CDS 3765 4958 . + 0 ID=cds-OFT03529.1;Parent=gene-HMPREF3107_01770;Dbxref=NCBI_GP:OFT03529.1;Name=OFT03529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427279.1;locus_tag=HMPREF3107_01770;product=aromatic amino acid aminotransferase;protein_id=OFT03529.1;transl_table=11 KV790766.1 Genbank gene 5307 7487 . - . ID=gene-HMPREF3107_01775;Name=HMPREF3107_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01775 KV790766.1 Protein Homology CDS 5307 7487 . - 0 ID=cds-OFT03530.1;Parent=gene-HMPREF3107_01775;Dbxref=NCBI_GP:OFT03530.1;Name=OFT03530.1;Note=catalyzes the formation of malate from glyoxylate and acetyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019957585.1;locus_tag=HMPREF3107_01775;product=malate synthase G;protein_id=OFT03530.1;transl_table=11 KV790766.1 Genbank gene 7694 8443 . - . ID=gene-HMPREF3107_01780;Name=HMPREF3107_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01780 KV790766.1 Protein Homology CDS 7694 8443 . - 0 ID=cds-OFT03544.1;Parent=gene-HMPREF3107_01780;Dbxref=NCBI_GP:OFT03544.1;Name=OFT03544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779096.1;locus_tag=HMPREF3107_01780;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=OFT03544.1;transl_table=11 KV790766.1 Genbank gene 8597 9643 . - . ID=gene-HMPREF3107_01785;Name=HMPREF3107_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01785 KV790766.1 Protein Homology CDS 8597 9643 . - 0 ID=cds-OFT03531.1;Parent=gene-HMPREF3107_01785;Dbxref=NCBI_GP:OFT03531.1;Name=OFT03531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774947.1;locus_tag=HMPREF3107_01785;product=ADP-L-glycero-D-mannoheptose-6-epimerase;protein_id=OFT03531.1;transl_table=11 KV790766.1 Genbank gene 9793 10848 . - . ID=gene-HMPREF3107_01790;Name=HMPREF3107_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01790 KV790766.1 Protein Homology CDS 9793 10848 . - 0 ID=cds-OFT03532.1;Parent=gene-HMPREF3107_01790;Dbxref=NCBI_GP:OFT03532.1;Name=OFT03532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742950.1;locus_tag=HMPREF3107_01790;product=S26 family signal peptidase;protein_id=OFT03532.1;transl_table=11 KV790766.1 Genbank gene 10849 12642 . - . ID=gene-HMPREF3107_01795;Name=HMPREF3107_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01795 KV790766.1 Protein Homology CDS 10849 12642 . - 0 ID=cds-OFT03545.1;Parent=gene-HMPREF3107_01795;Dbxref=NCBI_GP:OFT03545.1;Name=OFT03545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342446.1;locus_tag=HMPREF3107_01795;product=elongation factor 4;protein_id=OFT03545.1;transl_table=11 KV790766.1 Genbank gene 12880 14370 . + . ID=gene-HMPREF3107_01800;Name=HMPREF3107_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01800 KV790766.1 Protein Homology CDS 12880 14370 . + 0 ID=cds-OFT03533.1;Parent=gene-HMPREF3107_01800;Dbxref=NCBI_GP:OFT03533.1;Name=OFT03533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774954.1;locus_tag=HMPREF3107_01800;product=glycolate oxidase subunit GlcD;protein_id=OFT03533.1;transl_table=11 KV790766.1 Genbank gene 14470 15141 . + . ID=gene-HMPREF3107_01805;Name=HMPREF3107_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01805 KV790766.1 Protein Homology CDS 14470 15141 . + 0 ID=cds-OFT03534.1;Parent=gene-HMPREF3107_01805;Dbxref=NCBI_GP:OFT03534.1;Name=OFT03534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684102.1;locus_tag=HMPREF3107_01805;product=hypothetical protein;protein_id=OFT03534.1;transl_table=11 KV790766.1 Genbank gene 15268 16086 . - . ID=gene-HMPREF3107_01810;Name=HMPREF3107_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01810 KV790766.1 Protein Homology CDS 15268 16086 . - 0 ID=cds-OFT03535.1;Parent=gene-HMPREF3107_01810;Dbxref=NCBI_GP:OFT03535.1;Name=OFT03535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425841.1;locus_tag=HMPREF3107_01810;product=hypothetical protein;protein_id=OFT03535.1;transl_table=11 KV790766.1 Genbank gene 16088 17497 . - . ID=gene-HMPREF3107_01815;Name=HMPREF3107_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01815 KV790766.1 Protein Homology CDS 16088 17497 . - 0 ID=cds-OFT03536.1;Parent=gene-HMPREF3107_01815;Dbxref=NCBI_GP:OFT03536.1;Name=OFT03536.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270932.1;locus_tag=HMPREF3107_01815;product=threonine synthase;protein_id=OFT03536.1;transl_table=11 KV790766.1 Genbank gene 17551 17964 . - . ID=gene-HMPREF3107_01820;Name=HMPREF3107_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01820 KV790766.1 Protein Homology CDS 17551 17964 . - 0 ID=cds-OFT03537.1;Parent=gene-HMPREF3107_01820;Dbxref=NCBI_GP:OFT03537.1;Name=OFT03537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774963.1;locus_tag=HMPREF3107_01820;product=hypothetical protein;protein_id=OFT03537.1;transl_table=11 KV790766.1 Genbank gene 18119 19444 . + . ID=gene-HMPREF3107_01825;Name=HMPREF3107_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01825 KV790766.1 Protein Homology CDS 18119 19444 . + 0 ID=cds-OFT03538.1;Parent=gene-HMPREF3107_01825;Dbxref=NCBI_GP:OFT03538.1;Name=OFT03538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003791488.1;locus_tag=HMPREF3107_01825;product=recombination factor protein RarA;protein_id=OFT03538.1;transl_table=11 KV790766.1 Genbank gene 20272 21408 . + . ID=gene-HMPREF3107_01830;Name=HMPREF3107_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01830 KV790766.1 Protein Homology CDS 20272 21408 . + 0 ID=cds-OFT03539.1;Parent=gene-HMPREF3107_01830;Dbxref=NCBI_GP:OFT03539.1;Name=OFT03539.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054862.1;locus_tag=HMPREF3107_01830;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=OFT03539.1;transl_table=11 KV790766.1 Genbank gene 21417 22244 . + . ID=gene-HMPREF3107_01835;Name=HMPREF3107_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01835 KV790766.1 Protein Homology CDS 21417 22244 . + 0 ID=cds-OFT03540.1;Parent=gene-HMPREF3107_01835;Dbxref=NCBI_GP:OFT03540.1;Name=OFT03540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961786.1;locus_tag=HMPREF3107_01835;product=S-formylglutathione hydrolase;protein_id=OFT03540.1;transl_table=11 KV790766.1 Genbank gene 22716 23342 . - . ID=gene-HMPREF3107_01840;Name=HMPREF3107_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01840 KV790766.1 Protein Homology CDS 22716 23342 . - 0 ID=cds-OFT03541.1;Parent=gene-HMPREF3107_01840;Dbxref=NCBI_GP:OFT03541.1;Name=OFT03541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685518.1;locus_tag=HMPREF3107_01840;product=NAD(P)H-hydrate epimerase;protein_id=OFT03541.1;transl_table=11 KV790766.1 Genbank gene 23660 23926 . + . ID=gene-HMPREF3107_01845;Name=HMPREF3107_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01845 KV790766.1 Protein Homology CDS 23660 23926 . + 0 ID=cds-OFT03542.1;Parent=gene-HMPREF3107_01845;Dbxref=NCBI_GP:OFT03542.1;Name=OFT03542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173694.1;locus_tag=HMPREF3107_01845;product=iron transporter;protein_id=OFT03542.1;transl_table=11 KV790766.1 Genbank gene 24203 25976 . + . ID=gene-HMPREF3107_01850;Name=HMPREF3107_01850;end_range=25976,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01850;partial=true KV790766.1 Protein Homology CDS 24203 25976 . + 0 ID=cds-OFT03543.1;Parent=gene-HMPREF3107_01850;Dbxref=NCBI_GP:OFT03543.1;Name=OFT03543.1;end_range=25976,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783833.1;locus_tag=HMPREF3107_01850;partial=true;product=ferrous iron transporter B;protein_id=OFT03543.1;transl_table=11 ##sequence-region KV790767.1 1 6921 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790767.1 Genbank region 1 6921 . + . ID=KV790767.1:1..6921;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790767.1 Genbank gene 377 856 . + . ID=gene-HMPREF3107_01855;Name=HMPREF3107_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01855 KV790767.1 Protein Homology CDS 377 856 . + 0 ID=cds-OFT03516.1;Parent=gene-HMPREF3107_01855;Dbxref=NCBI_GP:OFT03516.1;Name=OFT03516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771718.1;locus_tag=HMPREF3107_01855;product=S-ribosylhomocysteine lyase;protein_id=OFT03516.1;transl_table=11 KV790767.1 Genbank gene 875 1579 . + . ID=gene-HMPREF3107_01860;Name=HMPREF3107_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01860 KV790767.1 Protein Homology CDS 875 1579 . + 0 ID=cds-OFT03517.1;Parent=gene-HMPREF3107_01860;Dbxref=NCBI_GP:OFT03517.1;Name=OFT03517.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771717.1;locus_tag=HMPREF3107_01860;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=OFT03517.1;transl_table=11 KV790767.1 Genbank gene 1664 2380 . + . ID=gene-HMPREF3107_01865;Name=HMPREF3107_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01865 KV790767.1 Protein Homology CDS 1664 2380 . + 0 ID=cds-OFT03518.1;Parent=gene-HMPREF3107_01865;Dbxref=NCBI_GP:OFT03518.1;Name=OFT03518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282761.1;locus_tag=HMPREF3107_01865;product=phosphoglycolate phosphatase;protein_id=OFT03518.1;transl_table=11 KV790767.1 Genbank gene 2461 2910 . + . ID=gene-HMPREF3107_01870;Name=HMPREF3107_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01870 KV790767.1 Protein Homology CDS 2461 2910 . + 0 ID=cds-OFT03519.1;Parent=gene-HMPREF3107_01870;Dbxref=NCBI_GP:OFT03519.1;Name=OFT03519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682288.1;locus_tag=HMPREF3107_01870;product=recombination regulator RecX;protein_id=OFT03519.1;transl_table=11 KV790767.1 Genbank gene 3057 3878 . + . ID=gene-HMPREF3107_01875;Name=HMPREF3107_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01875 KV790767.1 Protein Homology CDS 3057 3878 . + 0 ID=cds-OFT03520.1;Parent=gene-HMPREF3107_01875;Dbxref=NCBI_GP:OFT03520.1;Name=OFT03520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214207.1;locus_tag=HMPREF3107_01875;product=diadenosine tetraphosphatase;protein_id=OFT03520.1;transl_table=11 KV790767.1 Genbank gene 4140 5621 . + . ID=gene-HMPREF3107_01880;Name=HMPREF3107_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01880 KV790767.1 Protein Homology CDS 4140 5621 . + 0 ID=cds-OFT03521.1;Parent=gene-HMPREF3107_01880;Dbxref=NCBI_GP:OFT03521.1;Name=OFT03521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771708.1;locus_tag=HMPREF3107_01880;product=transporter;protein_id=OFT03521.1;transl_table=11 KV790767.1 Genbank gene 5957 6853 . + . ID=gene-HMPREF3107_01885;Name=HMPREF3107_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01885 KV790767.1 Protein Homology CDS 5957 6853 . + 0 ID=cds-OFT03522.1;Parent=gene-HMPREF3107_01885;Dbxref=NCBI_GP:OFT03522.1;Name=OFT03522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JWC8.2;locus_tag=HMPREF3107_01885;product=molecular chaperone Hsp33;protein_id=OFT03522.1;transl_table=11 ##sequence-region KV790768.1 1 6001 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790768.1 Genbank region 1 6001 . + . ID=KV790768.1:1..6001;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790768.1 Genbank gene 32 361 . - . ID=gene-HMPREF3107_01890;Name=HMPREF3107_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01890 KV790768.1 Protein Homology CDS 32 361 . - 0 ID=cds-OFT03512.1;Parent=gene-HMPREF3107_01890;Dbxref=NCBI_GP:OFT03512.1;Name=OFT03512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775734.1;locus_tag=HMPREF3107_01890;product=topoisomerase;protein_id=OFT03512.1;transl_table=11 KV790768.1 Genbank gene 613 726 . - . ID=gene-HMPREF3107_01895;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF3107_01895 KV790768.1 cmsearch rRNA 613 726 . - . ID=rna-HMPREF3107_01895;Parent=gene-HMPREF3107_01895;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_01895;product=5S ribosomal RNA KV790768.1 cmsearch exon 613 726 . - . ID=exon-HMPREF3107_01895-1;Parent=rna-HMPREF3107_01895;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_01895;product=5S ribosomal RNA KV790768.1 Genbank gene 819 3716 . - . ID=gene-HMPREF3107_01900;Name=HMPREF3107_01900;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF3107_01900 KV790768.1 Genbank rRNA 819 3716 . - . ID=rna-HMPREF3107_01900;Parent=gene-HMPREF3107_01900;gbkey=rRNA;locus_tag=HMPREF3107_01900;product=23S ribosomal RNA KV790768.1 Genbank exon 819 3716 . - . ID=exon-HMPREF3107_01900-1;Parent=rna-HMPREF3107_01900;gbkey=rRNA;locus_tag=HMPREF3107_01900;product=23S ribosomal RNA KV790768.1 Genbank gene 4067 4142 . - . ID=gene-HMPREF3107_01905;Name=HMPREF3107_01905;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01905 KV790768.1 tRNAscan-SE tRNA 4067 4142 . - . ID=rna-HMPREF3107_01905;Parent=gene-HMPREF3107_01905;anticodon=(pos:complement(4107..4109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01905;product=tRNA-Ala KV790768.1 tRNAscan-SE exon 4067 4142 . - . ID=exon-HMPREF3107_01905-1;Parent=rna-HMPREF3107_01905;anticodon=(pos:complement(4107..4109));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01905;product=tRNA-Ala KV790768.1 Genbank gene 4191 4267 . - . ID=gene-HMPREF3107_01910;Name=HMPREF3107_01910;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_01910 KV790768.1 tRNAscan-SE tRNA 4191 4267 . - . ID=rna-HMPREF3107_01910;Parent=gene-HMPREF3107_01910;anticodon=(pos:complement(4231..4233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01910;product=tRNA-Ile KV790768.1 tRNAscan-SE exon 4191 4267 . - . ID=exon-HMPREF3107_01910-1;Parent=rna-HMPREF3107_01910;anticodon=(pos:complement(4231..4233));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_01910;product=tRNA-Ile KV790768.1 Genbank gene 4322 5872 . - . ID=gene-HMPREF3107_01915;Name=HMPREF3107_01915;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF3107_01915 KV790768.1 Genbank rRNA 4322 5872 . - . ID=rna-HMPREF3107_01915;Parent=gene-HMPREF3107_01915;gbkey=rRNA;locus_tag=HMPREF3107_01915;product=16S ribosomal RNA KV790768.1 Genbank exon 4322 5872 . - . ID=exon-HMPREF3107_01915-1;Parent=rna-HMPREF3107_01915;gbkey=rRNA;locus_tag=HMPREF3107_01915;product=16S ribosomal RNA ##sequence-region KV790769.1 1 17224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790769.1 Genbank region 1 17224 . + . ID=KV790769.1:1..17224;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790769.1 Genbank gene 543 1919 . - . ID=gene-HMPREF3107_01920;Name=HMPREF3107_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01920 KV790769.1 Protein Homology CDS 543 1919 . - 0 ID=cds-OFT03478.1;Parent=gene-HMPREF3107_01920;Dbxref=NCBI_GP:OFT03478.1;Name=OFT03478.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687526.1;locus_tag=HMPREF3107_01920;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=OFT03478.1;transl_table=11 KV790769.1 Genbank gene 2214 2873 . - . ID=gene-HMPREF3107_01925;Name=HMPREF3107_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01925 KV790769.1 Protein Homology CDS 2214 2873 . - 0 ID=cds-OFT03479.1;Parent=gene-HMPREF3107_01925;Dbxref=NCBI_GP:OFT03479.1;Name=OFT03479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258257.1;locus_tag=HMPREF3107_01925;product=hypothetical protein;protein_id=OFT03479.1;transl_table=11 KV790769.1 Genbank gene 2986 3747 . - . ID=gene-HMPREF3107_01930;Name=HMPREF3107_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01930 KV790769.1 Protein Homology CDS 2986 3747 . - 0 ID=cds-OFT03480.1;Parent=gene-HMPREF3107_01930;Dbxref=NCBI_GP:OFT03480.1;Name=OFT03480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010359827.1;locus_tag=HMPREF3107_01930;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=OFT03480.1;transl_table=11 KV790769.1 Genbank gene 3744 3926 . - . ID=gene-HMPREF3107_01935;Name=HMPREF3107_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01935 KV790769.1 Protein Homology CDS 3744 3926 . - 0 ID=cds-OFT03481.1;Parent=gene-HMPREF3107_01935;Dbxref=NCBI_GP:OFT03481.1;Name=OFT03481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679524.1;locus_tag=HMPREF3107_01935;product=hypothetical protein;protein_id=OFT03481.1;transl_table=11 KV790769.1 Genbank gene 3997 4572 . - . ID=gene-HMPREF3107_01940;Name=HMPREF3107_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01940 KV790769.1 Protein Homology CDS 3997 4572 . - 0 ID=cds-OFT03482.1;Parent=gene-HMPREF3107_01940;Dbxref=NCBI_GP:OFT03482.1;Name=OFT03482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270541.1;locus_tag=HMPREF3107_01940;product=hypothetical protein;protein_id=OFT03482.1;transl_table=11 KV790769.1 Genbank gene 4779 5804 . - . ID=gene-HMPREF3107_01945;Name=HMPREF3107_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01945 KV790769.1 Protein Homology CDS 4779 5804 . - 0 ID=cds-OFT03483.1;Parent=gene-HMPREF3107_01945;Dbxref=NCBI_GP:OFT03483.1;Name=OFT03483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774999.1;locus_tag=HMPREF3107_01945;product=tetraacyldisaccharide 4'-kinase;protein_id=OFT03483.1;transl_table=11 KV790769.1 Genbank gene 6037 6594 . - . ID=gene-HMPREF3107_01950;Name=HMPREF3107_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01950 KV790769.1 Protein Homology CDS 6037 6594 . - 0 ID=cds-OFT03484.1;Parent=gene-HMPREF3107_01950;Dbxref=NCBI_GP:OFT03484.1;Name=OFT03484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768250.1;locus_tag=HMPREF3107_01950;product=hypothetical protein;protein_id=OFT03484.1;transl_table=11 KV790769.1 Genbank gene 6709 8370 . - . ID=gene-HMPREF3107_01955;Name=HMPREF3107_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01955 KV790769.1 Protein Homology CDS 6709 8370 . - 0 ID=cds-OFT03485.1;Parent=gene-HMPREF3107_01955;Dbxref=NCBI_GP:OFT03485.1;Name=OFT03485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449263.1;locus_tag=HMPREF3107_01955;product=DNA repair protein RecN;protein_id=OFT03485.1;transl_table=11 KV790769.1 Genbank gene 8522 9421 . + . ID=gene-HMPREF3107_01960;Name=HMPREF3107_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01960 KV790769.1 Protein Homology CDS 8522 9421 . + 0 ID=cds-OFT03486.1;Parent=gene-HMPREF3107_01960;Dbxref=NCBI_GP:OFT03486.1;Name=OFT03486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580280.1;locus_tag=HMPREF3107_01960;product=ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=OFT03486.1;transl_table=11 KV790769.1 Genbank gene 9527 10174 . - . ID=gene-HMPREF3107_01965;Name=HMPREF3107_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01965 KV790769.1 Protein Homology CDS 9527 10174 . - 0 ID=cds-OFT03487.1;Parent=gene-HMPREF3107_01965;Dbxref=NCBI_GP:OFT03487.1;Name=OFT03487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775007.1;locus_tag=HMPREF3107_01965;product=alpha/beta hydrolase;protein_id=OFT03487.1;transl_table=11 KV790769.1 Genbank gene 10331 12358 . + . ID=gene-HMPREF3107_01970;Name=HMPREF3107_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01970 KV790769.1 Protein Homology CDS 10331 12358 . + 0 ID=cds-OFT03488.1;Parent=gene-HMPREF3107_01970;Dbxref=NCBI_GP:OFT03488.1;Name=OFT03488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683466.1;locus_tag=HMPREF3107_01970;product=recombinase;protein_id=OFT03488.1;transl_table=11 KV790769.1 Genbank gene 12399 13022 . + . ID=gene-HMPREF3107_01975;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=HMPREF3107_01975 KV790769.1 Protein Homology CDS 12399 13022 . + 0 ID=cds-OFT03489.1;Parent=gene-HMPREF3107_01975;Dbxref=NCBI_GP:OFT03489.1;Name=OFT03489.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;gene=tmk;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775012.1;locus_tag=HMPREF3107_01975;product=dTMP kinase;protein_id=OFT03489.1;transl_table=11 KV790769.1 Genbank gene 13305 13793 . - . ID=gene-HMPREF3107_01980;Name=HMPREF3107_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01980 KV790769.1 Protein Homology CDS 13305 13793 . - 0 ID=cds-OFT03490.1;Parent=gene-HMPREF3107_01980;Dbxref=NCBI_GP:OFT03490.1;Name=OFT03490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775019.1;locus_tag=HMPREF3107_01980;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=OFT03490.1;transl_table=11 KV790769.1 Genbank gene 13937 14545 . - . ID=gene-HMPREF3107_01985;Name=HMPREF3107_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01985 KV790769.1 Protein Homology CDS 13937 14545 . - 0 ID=cds-OFT03491.1;Parent=gene-HMPREF3107_01985;Dbxref=NCBI_GP:OFT03491.1;Name=OFT03491.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775021.1;locus_tag=HMPREF3107_01985;product=hemerythrin HHE cation-binding protein;protein_id=OFT03491.1;transl_table=11 KV790769.1 Genbank gene 14905 16986 . + . ID=gene-HMPREF3107_01990;Name=HMPREF3107_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01990 KV790769.1 Protein Homology CDS 14905 16986 . + 0 ID=cds-OFT03492.1;Parent=gene-HMPREF3107_01990;Dbxref=NCBI_GP:OFT03492.1;Name=OFT03492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713845.1;locus_tag=HMPREF3107_01990;product=carbon starvation protein A;protein_id=OFT03492.1;transl_table=11 KV790769.1 Genbank gene 16976 17170 . + . ID=gene-HMPREF3107_01995;Name=HMPREF3107_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_01995 KV790769.1 Protein Homology CDS 16976 17170 . + 0 ID=cds-OFT03493.1;Parent=gene-HMPREF3107_01995;Dbxref=NCBI_GP:OFT03493.1;Name=OFT03493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222250.1;locus_tag=HMPREF3107_01995;product=hypothetical protein;protein_id=OFT03493.1;transl_table=11 ##sequence-region KV790770.1 1 19317 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790770.1 Genbank region 1 19317 . + . ID=KV790770.1:1..19317;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790770.1 Genbank pseudogene 87 2222 . + . ID=gene-HMPREF3107_02000;Name=HMPREF3107_02000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02000;pseudo=true KV790770.1 Protein Homology CDS 87 2222 . + 0 ID=cds-HMPREF3107_02000;Parent=gene-HMPREF3107_02000;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764581.1;locus_tag=HMPREF3107_02000;product=hypothetical protein;pseudo=true;transl_table=11 KV790770.1 Genbank gene 2649 3140 . - . ID=gene-HMPREF3107_02005;Name=HMPREF3107_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02005 KV790770.1 GeneMarkS+ CDS 2649 3140 . - 0 ID=cds-OFT03347.1;Parent=gene-HMPREF3107_02005;Dbxref=NCBI_GP:OFT03347.1;Name=OFT03347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02005;product=hypothetical protein;protein_id=OFT03347.1;transl_table=11 KV790770.1 Genbank gene 3228 3698 . - . ID=gene-HMPREF3107_02010;Name=HMPREF3107_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02010 KV790770.1 Protein Homology CDS 3228 3698 . - 0 ID=cds-OFT03348.1;Parent=gene-HMPREF3107_02010;Dbxref=NCBI_GP:OFT03348.1;Name=OFT03348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWA0.1;locus_tag=HMPREF3107_02010;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=OFT03348.1;transl_table=11 KV790770.1 Genbank gene 3738 4328 . - . ID=gene-HMPREF3107_02015;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF3107_02015 KV790770.1 Protein Homology CDS 3738 4328 . - 0 ID=cds-OFT03349.1;Parent=gene-HMPREF3107_02015;Dbxref=NCBI_GP:OFT03349.1;Name=OFT03349.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769726.1;locus_tag=HMPREF3107_02015;product=ribonuclease HII;protein_id=OFT03349.1;transl_table=11 KV790770.1 Genbank gene 4539 5561 . + . ID=gene-HMPREF3107_02020;Name=HMPREF3107_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02020 KV790770.1 Protein Homology CDS 4539 5561 . + 0 ID=cds-OFT03350.1;Parent=gene-HMPREF3107_02020;Dbxref=NCBI_GP:OFT03350.1;Name=OFT03350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018623423.1;locus_tag=HMPREF3107_02020;product=tRNA-dihydrouridine synthase B;protein_id=OFT03350.1;transl_table=11 KV790770.1 Genbank gene 5686 5925 . + . ID=gene-HMPREF3107_02025;Name=HMPREF3107_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02025 KV790770.1 Protein Homology CDS 5686 5925 . + 0 ID=cds-OFT03351.1;Parent=gene-HMPREF3107_02025;Dbxref=NCBI_GP:OFT03351.1;Name=OFT03351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711291.1;locus_tag=HMPREF3107_02025;product=Fis family transcriptional regulator;protein_id=OFT03351.1;transl_table=11 KV790770.1 Genbank gene 6013 6450 . - . ID=gene-HMPREF3107_02030;Name=HMPREF3107_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02030 KV790770.1 Protein Homology CDS 6013 6450 . - 0 ID=cds-OFT03352.1;Parent=gene-HMPREF3107_02030;Dbxref=NCBI_GP:OFT03352.1;Name=OFT03352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769719.1;locus_tag=HMPREF3107_02030;product=3-dehydroquinate dehydratase;protein_id=OFT03352.1;transl_table=11 KV790770.1 Genbank gene 6767 10981 . - . ID=gene-HMPREF3107_02035;Name=HMPREF3107_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02035 KV790770.1 Protein Homology CDS 6767 10981 . - 0 ID=cds-OFT03353.1;Parent=gene-HMPREF3107_02035;Dbxref=NCBI_GP:OFT03353.1;Name=OFT03353.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117514.1;locus_tag=HMPREF3107_02035;product=DNA-directed RNA polymerase subunit beta';protein_id=OFT03353.1;transl_table=11 KV790770.1 Genbank gene 11193 15389 . - . ID=gene-HMPREF3107_02040;Name=HMPREF3107_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02040 KV790770.1 Protein Homology CDS 11193 15389 . - 0 ID=cds-OFT03354.1;Parent=gene-HMPREF3107_02040;Dbxref=NCBI_GP:OFT03354.1;Name=OFT03354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235366.1;locus_tag=HMPREF3107_02040;product=DNA-directed RNA polymerase subunit beta;protein_id=OFT03354.1;transl_table=11 KV790770.1 Genbank gene 15599 15970 . - . ID=gene-HMPREF3107_02045;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF3107_02045 KV790770.1 Protein Homology CDS 15599 15970 . - 0 ID=cds-OFT03355.1;Parent=gene-HMPREF3107_02045;Dbxref=NCBI_GP:OFT03355.1;Name=OFT03355.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749262.1;locus_tag=HMPREF3107_02045;product=50S ribosomal protein L7/L12;protein_id=OFT03355.1;transl_table=11 KV790770.1 Genbank gene 16029 16529 . - . ID=gene-HMPREF3107_02050;Name=HMPREF3107_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02050 KV790770.1 Protein Homology CDS 16029 16529 . - 0 ID=cds-OFT03356.1;Parent=gene-HMPREF3107_02050;Dbxref=NCBI_GP:OFT03356.1;Name=OFT03356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690107.1;locus_tag=HMPREF3107_02050;product=50S ribosomal protein L10;protein_id=OFT03356.1;transl_table=11 KV790770.1 Genbank gene 16755 17450 . - . ID=gene-HMPREF3107_02055;Name=HMPREF3107_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02055 KV790770.1 Protein Homology CDS 16755 17450 . - 0 ID=cds-OFT03357.1;Parent=gene-HMPREF3107_02055;Dbxref=NCBI_GP:OFT03357.1;Name=OFT03357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270605.1;locus_tag=HMPREF3107_02055;product=50S ribosomal protein L1;protein_id=OFT03357.1;transl_table=11 KV790770.1 Genbank gene 17450 17884 . - . ID=gene-HMPREF3107_02060;Name=HMPREF3107_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02060 KV790770.1 Protein Homology CDS 17450 17884 . - 0 ID=cds-OFT03358.1;Parent=gene-HMPREF3107_02060;Dbxref=NCBI_GP:OFT03358.1;Name=OFT03358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218414.1;locus_tag=HMPREF3107_02060;product=50S ribosomal protein L11;protein_id=OFT03358.1;transl_table=11 KV790770.1 Genbank gene 18053 18586 . - . ID=gene-HMPREF3107_02065;Name=HMPREF3107_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02065 KV790770.1 Protein Homology CDS 18053 18586 . - 0 ID=cds-OFT03359.1;Parent=gene-HMPREF3107_02065;Dbxref=NCBI_GP:OFT03359.1;Name=OFT03359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769696.1;locus_tag=HMPREF3107_02065;product=transcription termination/antitermination protein NusG;protein_id=OFT03359.1;transl_table=11 KV790770.1 Genbank gene 18589 19032 . - . ID=gene-HMPREF3107_02070;Name=HMPREF3107_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02070 KV790770.1 GeneMarkS+ CDS 18589 19032 . - 0 ID=cds-OFT03360.1;Parent=gene-HMPREF3107_02070;Dbxref=NCBI_GP:OFT03360.1;Name=OFT03360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02070;product=hypothetical protein;protein_id=OFT03360.1;transl_table=11 KV790770.1 Genbank gene 19089 19164 . - . ID=gene-HMPREF3107_02075;Name=HMPREF3107_02075;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_02075 KV790770.1 tRNAscan-SE tRNA 19089 19164 . - . ID=rna-HMPREF3107_02075;Parent=gene-HMPREF3107_02075;anticodon=(pos:complement(19129..19131));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_02075;product=tRNA-Trp KV790770.1 tRNAscan-SE exon 19089 19164 . - . ID=exon-HMPREF3107_02075-1;Parent=rna-HMPREF3107_02075;anticodon=(pos:complement(19129..19131));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_02075;product=tRNA-Trp ##sequence-region KV790771.1 1 5544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790771.1 Genbank region 1 5544 . + . ID=KV790771.1:1..5544;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790771.1 Genbank pseudogene 165 4684 . + . ID=gene-HMPREF3107_02080;Name=HMPREF3107_02080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02080;pseudo=true KV790771.1 Protein Homology CDS 165 4684 . + 0 ID=cds-HMPREF3107_02080;Parent=gene-HMPREF3107_02080;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003799012.1;locus_tag=HMPREF3107_02080;product=autotransporter outer membrane beta-barrel domain-containing protein;pseudo=true;transl_table=11 KV790771.1 Genbank gene 4739 5275 . + . ID=gene-HMPREF3107_02085;Name=HMPREF3107_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02085 KV790771.1 Protein Homology CDS 4739 5275 . + 0 ID=cds-OFT03343.1;Parent=gene-HMPREF3107_02085;Dbxref=NCBI_GP:OFT03343.1;Name=OFT03343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003799013.1;locus_tag=HMPREF3107_02085;product=hypothetical protein;protein_id=OFT03343.1;transl_table=11 ##sequence-region KV790772.1 1 741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790772.1 Genbank region 1 741 . + . ID=KV790772.1:1..741;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790772.1 Genbank gene 153 572 . + . ID=gene-HMPREF3107_02090;Name=HMPREF3107_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02090 KV790772.1 Protein Homology CDS 153 572 . + 0 ID=cds-OFT03341.1;Parent=gene-HMPREF3107_02090;Dbxref=NCBI_GP:OFT03341.1;Name=OFT03341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747296.1;locus_tag=HMPREF3107_02090;product=hypothetical protein;protein_id=OFT03341.1;transl_table=11 ##sequence-region KV790773.1 1 7452 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790773.1 Genbank region 1 7452 . + . ID=KV790773.1:1..7452;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790773.1 Genbank pseudogene 1 471 . + . ID=gene-HMPREF3107_02095;Name=HMPREF3107_02095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02095;pseudo=true KV790773.1 GeneMarkS+ CDS 1 471 . + 0 ID=cds-HMPREF3107_02095;Parent=gene-HMPREF3107_02095;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02095;product=hypothetical protein;pseudo=true;transl_table=11 KV790773.1 Genbank pseudogene 710 1213 . - . ID=gene-HMPREF3107_02100;Name=HMPREF3107_02100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02100;pseudo=true KV790773.1 Protein Homology CDS 710 1213 . - 0 ID=cds-HMPREF3107_02100;Parent=gene-HMPREF3107_02100;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016153322.1;locus_tag=HMPREF3107_02100;product=hypothetical protein;pseudo=true;transl_table=11 KV790773.1 Genbank gene 1429 2634 . + . ID=gene-HMPREF3107_02105;Name=HMPREF3107_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02105 KV790773.1 Protein Homology CDS 1429 2634 . + 0 ID=cds-OFT03338.1;Parent=gene-HMPREF3107_02105;Dbxref=NCBI_GP:OFT03338.1;Name=OFT03338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632879.1;locus_tag=HMPREF3107_02105;product=nucleoside triphosphate hydrolase;protein_id=OFT03338.1;transl_table=11 KV790773.1 Genbank pseudogene 2693 4260 . + . ID=gene-HMPREF3107_02110;Name=HMPREF3107_02110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02110;pseudo=true KV790773.1 Protein Homology CDS 2693 4260 . + 0 ID=cds-HMPREF3107_02110;Parent=gene-HMPREF3107_02110;Note=frameshifted%3B internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019975394.1;locus_tag=HMPREF3107_02110;product=hypothetical protein;pseudo=true;transl_table=11 KV790773.1 Genbank gene 4287 4808 . + . ID=gene-HMPREF3107_02115;Name=HMPREF3107_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02115 KV790773.1 GeneMarkS+ CDS 4287 4808 . + 0 ID=cds-OFT03339.1;Parent=gene-HMPREF3107_02115;Dbxref=NCBI_GP:OFT03339.1;Name=OFT03339.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02115;product=hypothetical protein;protein_id=OFT03339.1;transl_table=11 KV790773.1 Genbank pseudogene 5404 5825 . - . ID=gene-HMPREF3107_02120;Name=HMPREF3107_02120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02120;pseudo=true KV790773.1 Protein Homology CDS 5404 5825 . - 0 ID=cds-HMPREF3107_02120;Parent=gene-HMPREF3107_02120;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822039.1;locus_tag=HMPREF3107_02120;product=hypothetical protein;pseudo=true;transl_table=11 KV790773.1 Genbank pseudogene 6878 7452 . + . ID=gene-HMPREF3107_02125;Name=HMPREF3107_02125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02125;pseudo=true KV790773.1 Protein Homology CDS 6878 7452 . + 0 ID=cds-HMPREF3107_02125;Parent=gene-HMPREF3107_02125;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273003.1;locus_tag=HMPREF3107_02125;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region KV790774.1 1 26068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790774.1 Genbank region 1 26068 . + . ID=KV790774.1:1..26068;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790774.1 Genbank gene 294 2102 . - . ID=gene-HMPREF3107_02130;Name=HMPREF3107_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02130 KV790774.1 Protein Homology CDS 294 2102 . - 0 ID=cds-OFT03224.1;Parent=gene-HMPREF3107_02130;Dbxref=NCBI_GP:OFT03224.1;Name=OFT03224.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269822.1;locus_tag=HMPREF3107_02130;product=aspartate--tRNA ligase;protein_id=OFT03224.1;transl_table=11 KV790774.1 Genbank gene 2165 2863 . - . ID=gene-HMPREF3107_02135;Name=HMPREF3107_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02135 KV790774.1 Protein Homology CDS 2165 2863 . - 0 ID=cds-OFT03225.1;Parent=gene-HMPREF3107_02135;Dbxref=NCBI_GP:OFT03225.1;Name=OFT03225.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686836.1;locus_tag=HMPREF3107_02135;product=hypothetical protein;protein_id=OFT03225.1;transl_table=11 KV790774.1 Genbank gene 2970 4106 . - . ID=gene-HMPREF3107_02140;Name=HMPREF3107_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02140 KV790774.1 Protein Homology CDS 2970 4106 . - 0 ID=cds-OFT03226.1;Parent=gene-HMPREF3107_02140;Dbxref=NCBI_GP:OFT03226.1;Name=OFT03226.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774186.1;locus_tag=HMPREF3107_02140;product=phospholipase;protein_id=OFT03226.1;transl_table=11 KV790774.1 Genbank gene 4224 4487 . - . ID=gene-HMPREF3107_02145;Name=HMPREF3107_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02145 KV790774.1 Protein Homology CDS 4224 4487 . - 0 ID=cds-OFT03227.1;Parent=gene-HMPREF3107_02145;Dbxref=NCBI_GP:OFT03227.1;Name=OFT03227.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116575.1;locus_tag=HMPREF3107_02145;product=30S ribosomal protein S20;protein_id=OFT03227.1;transl_table=11 KV790774.1 Genbank gene 4766 5908 . + . ID=gene-HMPREF3107_02150;Name=HMPREF3107_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02150 KV790774.1 Protein Homology CDS 4766 5908 . + 0 ID=cds-OFT03242.1;Parent=gene-HMPREF3107_02150;Dbxref=NCBI_GP:OFT03242.1;Name=OFT03242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686757.1;locus_tag=HMPREF3107_02150;product=polyamine ABC transporter substrate-binding protein;protein_id=OFT03242.1;transl_table=11 KV790774.1 Genbank gene 5978 7855 . - . ID=gene-HMPREF3107_02155;Name=HMPREF3107_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02155 KV790774.1 Protein Homology CDS 5978 7855 . - 0 ID=cds-OFT03228.1;Parent=gene-HMPREF3107_02155;Dbxref=NCBI_GP:OFT03228.1;Name=OFT03228.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343749.1;locus_tag=HMPREF3107_02155;product=potassium transporter;protein_id=OFT03228.1;transl_table=11 KV790774.1 Genbank gene 8663 10798 . - . ID=gene-HMPREF3107_02160;Name=HMPREF3107_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02160 KV790774.1 Protein Homology CDS 8663 10798 . - 0 ID=cds-OFT03229.1;Parent=gene-HMPREF3107_02160;Dbxref=NCBI_GP:OFT03229.1;Name=OFT03229.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682217.1;locus_tag=HMPREF3107_02160;product=pilus assembly protein PilQ;protein_id=OFT03229.1;transl_table=11 KV790774.1 Genbank gene 11355 11981 . - . ID=gene-HMPREF3107_02165;Name=HMPREF3107_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02165 KV790774.1 Protein Homology CDS 11355 11981 . - 0 ID=cds-OFT03243.1;Parent=gene-HMPREF3107_02165;Dbxref=NCBI_GP:OFT03243.1;Name=OFT03243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285026.1;locus_tag=HMPREF3107_02165;product=pilus assembly protein PilO;protein_id=OFT03243.1;transl_table=11 KV790774.1 Genbank gene 11983 12642 . - . ID=gene-HMPREF3107_02170;Name=HMPREF3107_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02170 KV790774.1 Protein Homology CDS 11983 12642 . - 0 ID=cds-OFT03230.1;Parent=gene-HMPREF3107_02170;Dbxref=NCBI_GP:OFT03230.1;Name=OFT03230.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774168.1;locus_tag=HMPREF3107_02170;product=pilus assembly protein PilP;protein_id=OFT03230.1;transl_table=11 KV790774.1 Genbank gene 12645 13736 . - . ID=gene-HMPREF3107_02175;Name=HMPREF3107_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02175 KV790774.1 Protein Homology CDS 12645 13736 . - 0 ID=cds-OFT03244.1;Parent=gene-HMPREF3107_02175;Dbxref=NCBI_GP:OFT03244.1;Name=OFT03244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684494.1;locus_tag=HMPREF3107_02175;product=pilus assembly protein PilM;protein_id=OFT03244.1;transl_table=11 KV790774.1 Genbank gene 13886 16294 . + . ID=gene-HMPREF3107_02180;Name=HMPREF3107_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02180 KV790774.1 Protein Homology CDS 13886 16294 . + 0 ID=cds-OFT03231.1;Parent=gene-HMPREF3107_02180;Dbxref=NCBI_GP:OFT03231.1;Name=OFT03231.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285029.1;locus_tag=HMPREF3107_02180;product=peptidase;protein_id=OFT03231.1;transl_table=11 KV790774.1 Genbank gene 16525 17388 . + . ID=gene-HMPREF3107_02185;Name=HMPREF3107_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02185 KV790774.1 Protein Homology CDS 16525 17388 . + 0 ID=cds-OFT03232.1;Parent=gene-HMPREF3107_02185;Dbxref=NCBI_GP:OFT03232.1;Name=OFT03232.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774163.1;locus_tag=HMPREF3107_02185;product=RNA polymerase factor sigma-32;protein_id=OFT03232.1;transl_table=11 KV790774.1 Genbank gene 17556 18431 . + . ID=gene-HMPREF3107_02190;Name=HMPREF3107_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02190 KV790774.1 Protein Homology CDS 17556 18431 . + 0 ID=cds-OFT03233.1;Parent=gene-HMPREF3107_02190;Dbxref=NCBI_GP:OFT03233.1;Name=OFT03233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774159.1;locus_tag=HMPREF3107_02190;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=OFT03233.1;transl_table=11 KV790774.1 Genbank gene 18449 19570 . + . ID=gene-HMPREF3107_02195;Name=HMPREF3107_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02195 KV790774.1 Protein Homology CDS 18449 19570 . + 0 ID=cds-OFT03234.1;Parent=gene-HMPREF3107_02195;Dbxref=NCBI_GP:OFT03234.1;Name=OFT03234.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679020.1;locus_tag=HMPREF3107_02195;product=hypothetical protein;protein_id=OFT03234.1;transl_table=11 KV790774.1 Genbank gene 19879 20148 . + . ID=gene-HMPREF3107_02200;Name=HMPREF3107_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02200 KV790774.1 Protein Homology CDS 19879 20148 . + 0 ID=cds-OFT03235.1;Parent=gene-HMPREF3107_02200;Dbxref=NCBI_GP:OFT03235.1;Name=OFT03235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426731.1;locus_tag=HMPREF3107_02200;product=hypothetical protein;protein_id=OFT03235.1;transl_table=11 KV790774.1 Genbank gene 20376 21305 . + . ID=gene-HMPREF3107_02205;Name=HMPREF3107_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02205 KV790774.1 Protein Homology CDS 20376 21305 . + 0 ID=cds-OFT03245.1;Parent=gene-HMPREF3107_02205;Dbxref=NCBI_GP:OFT03245.1;Name=OFT03245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755169.1;locus_tag=HMPREF3107_02205;product=transcriptional regulator;protein_id=OFT03245.1;transl_table=11 KV790774.1 Genbank gene 21368 22294 . + . ID=gene-HMPREF3107_02210;Name=HMPREF3107_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02210 KV790774.1 Protein Homology CDS 21368 22294 . + 0 ID=cds-OFT03236.1;Parent=gene-HMPREF3107_02210;Dbxref=NCBI_GP:OFT03236.1;Name=OFT03236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774148.1;locus_tag=HMPREF3107_02210;product=GTPase Era;protein_id=OFT03236.1;transl_table=11 KV790774.1 Genbank gene 22472 23485 . + . ID=gene-HMPREF3107_02215;Name=HMPREF3107_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02215 KV790774.1 Protein Homology CDS 22472 23485 . + 0 ID=cds-OFT03237.1;Parent=gene-HMPREF3107_02215;Dbxref=NCBI_GP:OFT03237.1;Name=OFT03237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774145.1;locus_tag=HMPREF3107_02215;product=PTS sugar transporter subunit IID;protein_id=OFT03237.1;transl_table=11 KV790774.1 Genbank gene 23635 24213 . + . ID=gene-HMPREF3107_02220;Name=HMPREF3107_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02220 KV790774.1 Protein Homology CDS 23635 24213 . + 0 ID=cds-OFT03238.1;Parent=gene-HMPREF3107_02220;Dbxref=NCBI_GP:OFT03238.1;Name=OFT03238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519437.1;locus_tag=HMPREF3107_02220;product=rRNA methyltransferase;protein_id=OFT03238.1;transl_table=11 KV790774.1 Genbank gene 24230 24601 . + . ID=gene-HMPREF3107_02225;Name=HMPREF3107_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02225 KV790774.1 Protein Homology CDS 24230 24601 . + 0 ID=cds-OFT03239.1;Parent=gene-HMPREF3107_02225;Dbxref=NCBI_GP:OFT03239.1;Name=OFT03239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769982.1;locus_tag=HMPREF3107_02225;product=SirB family protein;protein_id=OFT03239.1;transl_table=11 KV790774.1 Genbank gene 24702 25079 . - . ID=gene-HMPREF3107_02230;Name=HMPREF3107_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02230 KV790774.1 GeneMarkS+ CDS 24702 25079 . - 0 ID=cds-OFT03240.1;Parent=gene-HMPREF3107_02230;Dbxref=NCBI_GP:OFT03240.1;Name=OFT03240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02230;product=hypothetical protein;protein_id=OFT03240.1;transl_table=11 KV790774.1 Genbank gene 25244 25627 . + . ID=gene-HMPREF3107_02235;Name=HMPREF3107_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02235 KV790774.1 Protein Homology CDS 25244 25627 . + 0 ID=cds-OFT03241.1;Parent=gene-HMPREF3107_02235;Dbxref=NCBI_GP:OFT03241.1;Name=OFT03241.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769977.1;locus_tag=HMPREF3107_02235;product=glycine cleavage system protein H;protein_id=OFT03241.1;transl_table=11 KV790774.1 Genbank pseudogene 25646 26068 . + . ID=gene-HMPREF3107_02240;Name=HMPREF3107_02240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02240;pseudo=true KV790774.1 GeneMarkS+ CDS 25646 26068 . + 0 ID=cds-HMPREF3107_02240;Parent=gene-HMPREF3107_02240;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02240;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790775.1 1 665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790775.1 Genbank region 1 665 . + . ID=KV790775.1:1..665;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790775.1 Genbank pseudogene 46 665 . + . ID=gene-HMPREF3107_02245;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=HMPREF3107_02245;pseudo=true KV790775.1 Protein Homology CDS 46 665 . + 0 ID=cds-HMPREF3107_02245;Parent=gene-HMPREF3107_02245;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242184.1;locus_tag=HMPREF3107_02245;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region KV790776.1 1 6662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790776.1 Genbank region 1 6662 . + . ID=KV790776.1:1..6662;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790776.1 Genbank pseudogene 1 122 . + . ID=gene-HMPREF3107_02250;Name=HMPREF3107_02250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02250;pseudo=true KV790776.1 Protein Homology CDS 1 122 . + 2 ID=cds-HMPREF3107_02250;Parent=gene-HMPREF3107_02250;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003782610.1;locus_tag=HMPREF3107_02250;product=excisionase;pseudo=true;transl_table=11 KV790776.1 Genbank gene 107 1303 . + . ID=gene-HMPREF3107_02255;Name=HMPREF3107_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02255 KV790776.1 GeneMarkS+ CDS 107 1303 . + 0 ID=cds-OFT03204.1;Parent=gene-HMPREF3107_02255;Dbxref=NCBI_GP:OFT03204.1;Name=OFT03204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02255;product=hypothetical protein;protein_id=OFT03204.1;transl_table=11 KV790776.1 Genbank gene 1502 1912 . - . ID=gene-HMPREF3107_02260;Name=HMPREF3107_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02260 KV790776.1 Protein Homology CDS 1502 1912 . - 0 ID=cds-OFT03205.1;Parent=gene-HMPREF3107_02260;Dbxref=NCBI_GP:OFT03205.1;Name=OFT03205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005624913.1;locus_tag=HMPREF3107_02260;product=twitching motility protein PilT;protein_id=OFT03205.1;transl_table=11 KV790776.1 Genbank gene 1915 2190 . - . ID=gene-HMPREF3107_02265;Name=HMPREF3107_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02265 KV790776.1 Protein Homology CDS 1915 2190 . - 0 ID=cds-OFT03206.1;Parent=gene-HMPREF3107_02265;Dbxref=NCBI_GP:OFT03206.1;Name=OFT03206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234121.1;locus_tag=HMPREF3107_02265;product=prevent-host-death protein;protein_id=OFT03206.1;transl_table=11 KV790776.1 Genbank gene 2893 6483 . + . ID=gene-HMPREF3107_02270;Name=HMPREF3107_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02270 KV790776.1 GeneMarkS+ CDS 2893 6483 . + 0 ID=cds-OFT03207.1;Parent=gene-HMPREF3107_02270;Dbxref=NCBI_GP:OFT03207.1;Name=OFT03207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02270;product=hypothetical protein;protein_id=OFT03207.1;transl_table=11 ##sequence-region KV790777.1 1 13164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790777.1 Genbank region 1 13164 . + . ID=KV790777.1:1..13164;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790777.1 Genbank gene 61 426 . - . ID=gene-HMPREF3107_02275;Name=HMPREF3107_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02275 KV790777.1 Protein Homology CDS 61 426 . - 0 ID=cds-OFT03174.1;Parent=gene-HMPREF3107_02275;Dbxref=NCBI_GP:OFT03174.1;Name=OFT03174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284080.1;locus_tag=HMPREF3107_02275;product=DNA-binding protein;protein_id=OFT03174.1;transl_table=11 KV790777.1 Genbank gene 547 1842 . - . ID=gene-HMPREF3107_02280;Name=HMPREF3107_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02280 KV790777.1 Protein Homology CDS 547 1842 . - 0 ID=cds-OFT03175.1;Parent=gene-HMPREF3107_02280;Dbxref=NCBI_GP:OFT03175.1;Name=OFT03175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343743.1;locus_tag=HMPREF3107_02280;product=hypothetical protein;protein_id=OFT03175.1;transl_table=11 KV790777.1 Genbank gene 1858 2052 . - . ID=gene-HMPREF3107_02285;Name=HMPREF3107_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02285 KV790777.1 Protein Homology CDS 1858 2052 . - 0 ID=cds-OFT03176.1;Parent=gene-HMPREF3107_02285;Dbxref=NCBI_GP:OFT03176.1;Name=OFT03176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773124.1;locus_tag=HMPREF3107_02285;product=nitrogen fixation protein FixS;protein_id=OFT03176.1;transl_table=11 KV790777.1 Genbank gene 2055 2372 . - . ID=gene-HMPREF3107_02290;Name=HMPREF3107_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02290 KV790777.1 Protein Homology CDS 2055 2372 . - 0 ID=cds-OFT03177.1;Parent=gene-HMPREF3107_02290;Dbxref=NCBI_GP:OFT03177.1;Name=OFT03177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284931.1;locus_tag=HMPREF3107_02290;product=hypothetical protein;protein_id=OFT03177.1;transl_table=11 KV790777.1 Genbank gene 2450 3589 . - . ID=gene-HMPREF3107_02295;Name=HMPREF3107_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02295 KV790777.1 Protein Homology CDS 2450 3589 . - 0 ID=cds-OFT03186.1;Parent=gene-HMPREF3107_02295;Dbxref=NCBI_GP:OFT03186.1;Name=OFT03186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773128.1;locus_tag=HMPREF3107_02295;product=type IV pili twitching motility protein PilT;protein_id=OFT03186.1;transl_table=11 KV790777.1 Genbank gene 3865 4338 . + . ID=gene-HMPREF3107_02300;Name=HMPREF3107_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02300 KV790777.1 Protein Homology CDS 3865 4338 . + 0 ID=cds-OFT03178.1;Parent=gene-HMPREF3107_02300;Dbxref=NCBI_GP:OFT03178.1;Name=OFT03178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312447.1;locus_tag=HMPREF3107_02300;product=peroxiredoxin;protein_id=OFT03178.1;transl_table=11 KV790777.1 Genbank gene 4494 5717 . - . ID=gene-HMPREF3107_02305;Name=HMPREF3107_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02305 KV790777.1 Protein Homology CDS 4494 5717 . - 0 ID=cds-OFT03179.1;Parent=gene-HMPREF3107_02305;Dbxref=NCBI_GP:OFT03179.1;Name=OFT03179.1;Note=FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824785.1;locus_tag=HMPREF3107_02305;product=beta-ketoacyl-ACP synthase II;protein_id=OFT03179.1;transl_table=11 KV790777.1 Genbank gene 5717 6445 . - . ID=gene-HMPREF3107_02310;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF3107_02310 KV790777.1 Protein Homology CDS 5717 6445 . - 0 ID=cds-OFT03180.1;Parent=gene-HMPREF3107_02310;Dbxref=NCBI_GP:OFT03180.1;Name=OFT03180.1;Note=Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009424949.1;locus_tag=HMPREF3107_02310;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=OFT03180.1;transl_table=11 KV790777.1 Genbank gene 6723 7379 . - . ID=gene-HMPREF3107_02315;Name=HMPREF3107_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02315 KV790777.1 GeneMarkS+ CDS 6723 7379 . - 0 ID=cds-OFT03181.1;Parent=gene-HMPREF3107_02315;Dbxref=NCBI_GP:OFT03181.1;Name=OFT03181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02315;product=hypothetical protein;protein_id=OFT03181.1;transl_table=11 KV790777.1 Genbank gene 7584 8087 . - . ID=gene-HMPREF3107_02320;Name=HMPREF3107_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02320 KV790777.1 Protein Homology CDS 7584 8087 . - 0 ID=cds-OFT03182.1;Parent=gene-HMPREF3107_02320;Dbxref=NCBI_GP:OFT03182.1;Name=OFT03182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773140.1;locus_tag=HMPREF3107_02320;product=thioester dehydrase;protein_id=OFT03182.1;transl_table=11 KV790777.1 Genbank gene 8068 9294 . - . ID=gene-HMPREF3107_02325;Name=HMPREF3107_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02325 KV790777.1 Protein Homology CDS 8068 9294 . - 0 ID=cds-OFT03183.1;Parent=gene-HMPREF3107_02325;Dbxref=NCBI_GP:OFT03183.1;Name=OFT03183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824608.1;locus_tag=HMPREF3107_02325;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=OFT03183.1;transl_table=11 KV790777.1 Genbank gene 9287 9709 . - . ID=gene-HMPREF3107_02330;Name=HMPREF3107_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02330 KV790777.1 Protein Homology CDS 9287 9709 . - 0 ID=cds-OFT03184.1;Parent=gene-HMPREF3107_02330;Dbxref=NCBI_GP:OFT03184.1;Name=OFT03184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824606.1;locus_tag=HMPREF3107_02330;product=hypothetical protein;protein_id=OFT03184.1;transl_table=11 KV790777.1 Genbank gene 10116 12389 . + . ID=gene-HMPREF3107_02335;Name=HMPREF3107_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02335 KV790777.1 Protein Homology CDS 10116 12389 . + 0 ID=cds-OFT03187.1;Parent=gene-HMPREF3107_02335;Dbxref=NCBI_GP:OFT03187.1;Name=OFT03187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783910.1;locus_tag=HMPREF3107_02335;product=TonB-dependent receptor;protein_id=OFT03187.1;transl_table=11 KV790777.1 Genbank gene 12506 13164 . - . ID=gene-HMPREF3107_02340;Name=HMPREF3107_02340;end_range=13164,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02340;partial=true KV790777.1 Protein Homology CDS 12506 13164 . - 2 ID=cds-OFT03185.1;Parent=gene-HMPREF3107_02340;Dbxref=NCBI_GP:OFT03185.1;Name=OFT03185.1;end_range=13164,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759878.1;locus_tag=HMPREF3107_02340;partial=true;product=hypothetical protein;protein_id=OFT03185.1;transl_table=11 ##sequence-region KV790778.1 1 5380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790778.1 Genbank region 1 5380 . + . ID=KV790778.1:1..5380;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790778.1 Genbank gene 75 947 . - . ID=gene-HMPREF3107_02345;Name=HMPREF3107_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02345 KV790778.1 Protein Homology CDS 75 947 . - 0 ID=cds-OFT03076.1;Parent=gene-HMPREF3107_02345;Dbxref=NCBI_GP:OFT03076.1;Name=OFT03076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756659.1;locus_tag=HMPREF3107_02345;product=serine/threonine protein phosphatase;protein_id=OFT03076.1;transl_table=11 KV790778.1 Genbank gene 1204 1545 . - . ID=gene-HMPREF3107_02350;Name=HMPREF3107_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02350 KV790778.1 Protein Homology CDS 1204 1545 . - 0 ID=cds-OFT03077.1;Parent=gene-HMPREF3107_02350;Dbxref=NCBI_GP:OFT03077.1;Name=OFT03077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822222.1;locus_tag=HMPREF3107_02350;product=hypothetical protein;protein_id=OFT03077.1;transl_table=11 KV790778.1 Genbank gene 1601 3166 . + . ID=gene-HMPREF3107_02355;Name=HMPREF3107_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02355 KV790778.1 Protein Homology CDS 1601 3166 . + 0 ID=cds-OFT03078.1;Parent=gene-HMPREF3107_02355;Dbxref=NCBI_GP:OFT03078.1;Name=OFT03078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822223.1;locus_tag=HMPREF3107_02355;product=serine recombinase;protein_id=OFT03078.1;transl_table=11 KV790778.1 Genbank gene 3169 4056 . + . ID=gene-HMPREF3107_02360;Name=HMPREF3107_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02360 KV790778.1 Protein Homology CDS 3169 4056 . + 0 ID=cds-OFT03080.1;Parent=gene-HMPREF3107_02360;Dbxref=NCBI_GP:OFT03080.1;Name=OFT03080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005571821.1;locus_tag=HMPREF3107_02360;product=chromosome partitioning protein ParB;protein_id=OFT03080.1;transl_table=11 KV790778.1 Genbank gene 4043 4942 . + . ID=gene-HMPREF3107_02365;Name=HMPREF3107_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02365 KV790778.1 Protein Homology CDS 4043 4942 . + 0 ID=cds-OFT03079.1;Parent=gene-HMPREF3107_02365;Dbxref=NCBI_GP:OFT03079.1;Name=OFT03079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448787.1;locus_tag=HMPREF3107_02365;product=RepB plasmid partition;protein_id=OFT03079.1;transl_table=11 ##sequence-region KV790779.1 1 805 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790779.1 Genbank region 1 805 . + . ID=KV790779.1:1..805;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790779.1 Genbank gene 1 805 . - . ID=gene-HMPREF3107_02370;Name=HMPREF3107_02370;end_range=805,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02370;partial=true;start_range=.,1 KV790779.1 Protein Homology CDS 1 805 . - 0 ID=cds-OFT03074.1;Parent=gene-HMPREF3107_02370;Dbxref=NCBI_GP:OFT03074.1;Name=OFT03074.1;end_range=805,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247434.1;locus_tag=HMPREF3107_02370;partial=true;product=transposase;protein_id=OFT03074.1;start_range=.,1;transl_table=11 ##sequence-region KV790780.1 1 1375 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790780.1 Genbank region 1 1375 . + . ID=KV790780.1:1..1375;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790780.1 Genbank gene 925 1116 . + . ID=gene-HMPREF3107_02375;Name=HMPREF3107_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02375 KV790780.1 GeneMarkS+ CDS 925 1116 . + 0 ID=cds-OFT03071.1;Parent=gene-HMPREF3107_02375;Dbxref=NCBI_GP:OFT03071.1;Name=OFT03071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02375;product=hypothetical protein;protein_id=OFT03071.1;transl_table=11 ##sequence-region KV790781.1 1 4147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790781.1 Genbank region 1 4147 . + . ID=KV790781.1:1..4147;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790781.1 Genbank pseudogene 1 342 . + . ID=gene-HMPREF3107_02380;Name=HMPREF3107_02380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02380;pseudo=true KV790781.1 GeneMarkS+ CDS 1 342 . + 0 ID=cds-HMPREF3107_02380;Parent=gene-HMPREF3107_02380;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02380;product=hypothetical protein;pseudo=true;transl_table=11 KV790781.1 Genbank gene 349 1305 . + . ID=gene-HMPREF3107_02385;Name=HMPREF3107_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02385 KV790781.1 Protein Homology CDS 349 1305 . + 0 ID=cds-OFT03062.1;Parent=gene-HMPREF3107_02385;Dbxref=NCBI_GP:OFT03062.1;Name=OFT03062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425201.1;locus_tag=HMPREF3107_02385;product=RNA polymerase subunit sigma;protein_id=OFT03062.1;transl_table=11 KV790781.1 Genbank gene 1408 2310 . + . ID=gene-HMPREF3107_02390;Name=HMPREF3107_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02390 KV790781.1 GeneMarkS+ CDS 1408 2310 . + 0 ID=cds-OFT03063.1;Parent=gene-HMPREF3107_02390;Dbxref=NCBI_GP:OFT03063.1;Name=OFT03063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02390;product=hypothetical protein;protein_id=OFT03063.1;transl_table=11 KV790781.1 Genbank gene 2699 3124 . - . ID=gene-HMPREF3107_02395;Name=HMPREF3107_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02395 KV790781.1 Protein Homology CDS 2699 3124 . - 0 ID=cds-OFT03064.1;Parent=gene-HMPREF3107_02395;Dbxref=NCBI_GP:OFT03064.1;Name=OFT03064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448798.1;locus_tag=HMPREF3107_02395;product=hypothetical protein;protein_id=OFT03064.1;transl_table=11 KV790781.1 Genbank gene 3121 3972 . - . ID=gene-HMPREF3107_02400;Name=HMPREF3107_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02400 KV790781.1 GeneMarkS+ CDS 3121 3972 . - 0 ID=cds-OFT03065.1;Parent=gene-HMPREF3107_02400;Dbxref=NCBI_GP:OFT03065.1;Name=OFT03065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02400;product=hypothetical protein;protein_id=OFT03065.1;transl_table=11 ##sequence-region KV790782.1 1 12359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790782.1 Genbank region 1 12359 . + . ID=KV790782.1:1..12359;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790782.1 Genbank gene 78 1583 . - . ID=gene-HMPREF3107_02405;Name=HMPREF3107_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02405 KV790782.1 Protein Homology CDS 78 1583 . - 0 ID=cds-OFT02937.1;Parent=gene-HMPREF3107_02405;Dbxref=NCBI_GP:OFT02937.1;Name=OFT02937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343191.1;locus_tag=HMPREF3107_02405;product=peptidase S41;protein_id=OFT02937.1;transl_table=11 KV790782.1 Genbank gene 1764 3056 . - . ID=gene-HMPREF3107_02410;Name=HMPREF3107_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02410 KV790782.1 Protein Homology CDS 1764 3056 . - 0 ID=cds-OFT02938.1;Parent=gene-HMPREF3107_02410;Dbxref=NCBI_GP:OFT02938.1;Name=OFT02938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425059.1;locus_tag=HMPREF3107_02410;product=peptidase M23;protein_id=OFT02938.1;transl_table=11 KV790782.1 Genbank gene 3206 4300 . + . ID=gene-HMPREF3107_02415;Name=HMPREF3107_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02415 KV790782.1 Protein Homology CDS 3206 4300 . + 0 ID=cds-OFT02939.1;Parent=gene-HMPREF3107_02415;Dbxref=NCBI_GP:OFT02939.1;Name=OFT02939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343195.1;locus_tag=HMPREF3107_02415;product=hypothetical protein;protein_id=OFT02939.1;transl_table=11 KV790782.1 Genbank gene 4480 5274 . - . ID=gene-HMPREF3107_02420;Name=HMPREF3107_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02420 KV790782.1 Protein Homology CDS 4480 5274 . - 0 ID=cds-OFT02940.1;Parent=gene-HMPREF3107_02420;Dbxref=NCBI_GP:OFT02940.1;Name=OFT02940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JY72.1;locus_tag=HMPREF3107_02420;product=thymidylate synthase;protein_id=OFT02940.1;transl_table=11 KV790782.1 Genbank gene 5351 5911 . - . ID=gene-HMPREF3107_02425;Name=HMPREF3107_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02425 KV790782.1 Protein Homology CDS 5351 5911 . - 0 ID=cds-OFT02941.1;Parent=gene-HMPREF3107_02425;Dbxref=NCBI_GP:OFT02941.1;Name=OFT02941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425693.1;locus_tag=HMPREF3107_02425;product=nitroreductase;protein_id=OFT02941.1;transl_table=11 KV790782.1 Genbank gene 5927 6913 . - . ID=gene-HMPREF3107_02430;Name=HMPREF3107_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02430 KV790782.1 Protein Homology CDS 5927 6913 . - 0 ID=cds-OFT02949.1;Parent=gene-HMPREF3107_02430;Dbxref=NCBI_GP:OFT02949.1;Name=OFT02949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771963.1;locus_tag=HMPREF3107_02430;product=tRNA dihydrouridine synthase DusA;protein_id=OFT02949.1;transl_table=11 KV790782.1 Genbank gene 6966 7592 . - . ID=gene-HMPREF3107_02435;Name=HMPREF3107_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02435 KV790782.1 Protein Homology CDS 6966 7592 . - 0 ID=cds-OFT02950.1;Parent=gene-HMPREF3107_02435;Dbxref=NCBI_GP:OFT02950.1;Name=OFT02950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256786.1;locus_tag=HMPREF3107_02435;product=phosphoribosylglycinamide formyltransferase;protein_id=OFT02950.1;transl_table=11 KV790782.1 Genbank gene 7784 9505 . + . ID=gene-HMPREF3107_02440;Name=HMPREF3107_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02440 KV790782.1 Protein Homology CDS 7784 9505 . + 0 ID=cds-OFT02942.1;Parent=gene-HMPREF3107_02440;Dbxref=NCBI_GP:OFT02942.1;Name=OFT02942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771958.1;locus_tag=HMPREF3107_02440;product=exodeoxyribonuclease V subunit alpha;protein_id=OFT02942.1;transl_table=11 KV790782.1 Genbank gene 9620 10117 . + . ID=gene-HMPREF3107_02445;Name=HMPREF3107_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02445 KV790782.1 GeneMarkS+ CDS 9620 10117 . + 0 ID=cds-OFT02943.1;Parent=gene-HMPREF3107_02445;Dbxref=NCBI_GP:OFT02943.1;Name=OFT02943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02445;product=hypothetical protein;protein_id=OFT02943.1;transl_table=11 KV790782.1 Genbank gene 10301 10744 . + . ID=gene-HMPREF3107_02450;Name=HMPREF3107_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02450 KV790782.1 Protein Homology CDS 10301 10744 . + 0 ID=cds-OFT02944.1;Parent=gene-HMPREF3107_02450;Dbxref=NCBI_GP:OFT02944.1;Name=OFT02944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771955.1;locus_tag=HMPREF3107_02450;product=DNA polymerase III subunit chi;protein_id=OFT02944.1;transl_table=11 KV790782.1 Genbank gene 10749 11000 . + . ID=gene-HMPREF3107_02455;Name=HMPREF3107_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02455 KV790782.1 Protein Homology CDS 10749 11000 . + 0 ID=cds-OFT02945.1;Parent=gene-HMPREF3107_02455;Dbxref=NCBI_GP:OFT02945.1;Name=OFT02945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771954.1;locus_tag=HMPREF3107_02455;product=DNA mismatch repair protein MutT;protein_id=OFT02945.1;transl_table=11 KV790782.1 Genbank gene 11083 11541 . + . ID=gene-HMPREF3107_02460;Name=HMPREF3107_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02460 KV790782.1 Protein Homology CDS 11083 11541 . + 0 ID=cds-OFT02946.1;Parent=gene-HMPREF3107_02460;Dbxref=NCBI_GP:OFT02946.1;Name=OFT02946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766722.1;locus_tag=HMPREF3107_02460;product=hypothetical protein;protein_id=OFT02946.1;transl_table=11 KV790782.1 Genbank gene 11692 12021 . - . ID=gene-HMPREF3107_02465;Name=HMPREF3107_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02465 KV790782.1 Protein Homology CDS 11692 12021 . - 0 ID=cds-OFT02947.1;Parent=gene-HMPREF3107_02465;Dbxref=NCBI_GP:OFT02947.1;Name=OFT02947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675295.1;locus_tag=HMPREF3107_02465;product=hypothetical protein;protein_id=OFT02947.1;transl_table=11 KV790782.1 Genbank gene 12065 12313 . - . ID=gene-HMPREF3107_02470;Name=HMPREF3107_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02470 KV790782.1 Protein Homology CDS 12065 12313 . - 0 ID=cds-OFT02948.1;Parent=gene-HMPREF3107_02470;Dbxref=NCBI_GP:OFT02948.1;Name=OFT02948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761186.1;locus_tag=HMPREF3107_02470;product=hypothetical protein;protein_id=OFT02948.1;transl_table=11 ##sequence-region KV790783.1 1 37056 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790783.1 Genbank region 1 37056 . + . ID=KV790783.1:1..37056;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790783.1 Genbank pseudogene 272 2014 . + . ID=gene-HMPREF3107_02475;Name=HMPREF3107_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02475;pseudo=true KV790783.1 GeneMarkS+ CDS 272 2014 . + 0 ID=cds-HMPREF3107_02475;Parent=gene-HMPREF3107_02475;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02475;product=hypothetical protein;pseudo=true;transl_table=11 KV790783.1 Genbank gene 2035 5400 . + . ID=gene-HMPREF3107_02480;Name=HMPREF3107_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02480;partial=true;start_range=.,2035 KV790783.1 GeneMarkS+ CDS 2035 5400 . + 0 ID=cds-OFT02860.1;Parent=gene-HMPREF3107_02480;Dbxref=NCBI_GP:OFT02860.1;Name=OFT02860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02480;partial=true;product=hypothetical protein;protein_id=OFT02860.1;start_range=.,2035;transl_table=11 KV790783.1 Genbank gene 5429 6214 . + . ID=gene-HMPREF3107_02485;Name=HMPREF3107_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02485 KV790783.1 Protein Homology CDS 5429 6214 . + 0 ID=cds-OFT02861.1;Parent=gene-HMPREF3107_02485;Dbxref=NCBI_GP:OFT02861.1;Name=OFT02861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822760.1;locus_tag=HMPREF3107_02485;product=hydrolase TatD;protein_id=OFT02861.1;transl_table=11 KV790783.1 Genbank gene 6463 7233 . - . ID=gene-HMPREF3107_02490;Name=HMPREF3107_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02490 KV790783.1 Protein Homology CDS 6463 7233 . - 0 ID=cds-OFT02862.1;Parent=gene-HMPREF3107_02490;Dbxref=NCBI_GP:OFT02862.1;Name=OFT02862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771233.1;locus_tag=HMPREF3107_02490;product=hypothetical protein;protein_id=OFT02862.1;transl_table=11 KV790783.1 Genbank gene 7292 10480 . - . ID=gene-HMPREF3107_02495;Name=HMPREF3107_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02495 KV790783.1 Protein Homology CDS 7292 10480 . - 0 ID=cds-OFT02863.1;Parent=gene-HMPREF3107_02495;Dbxref=NCBI_GP:OFT02863.1;Name=OFT02863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425058.1;locus_tag=HMPREF3107_02495;product=exodeoxyribonuclease V subunit gamma;protein_id=OFT02863.1;transl_table=11 KV790783.1 Genbank gene 10577 10759 . - . ID=gene-HMPREF3107_02500;Name=HMPREF3107_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02500 KV790783.1 GeneMarkS+ CDS 10577 10759 . - 0 ID=cds-OFT02864.1;Parent=gene-HMPREF3107_02500;Dbxref=NCBI_GP:OFT02864.1;Name=OFT02864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02500;product=hypothetical protein;protein_id=OFT02864.1;transl_table=11 KV790783.1 Genbank gene 11140 12546 . - . ID=gene-HMPREF3107_02505;Name=HMPREF3107_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02505 KV790783.1 Protein Homology CDS 11140 12546 . - 0 ID=cds-OFT02885.1;Parent=gene-HMPREF3107_02505;Dbxref=NCBI_GP:OFT02885.1;Name=OFT02885.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771224.1;locus_tag=HMPREF3107_02505;product=isopropylmalate isomerase;protein_id=OFT02885.1;transl_table=11 KV790783.1 Genbank gene 12768 14105 . + . ID=gene-HMPREF3107_02510;Name=HMPREF3107_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02510 KV790783.1 Protein Homology CDS 12768 14105 . + 0 ID=cds-OFT02865.1;Parent=gene-HMPREF3107_02510;Dbxref=NCBI_GP:OFT02865.1;Name=OFT02865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771222.1;locus_tag=HMPREF3107_02510;product=glutamate--cysteine ligase;protein_id=OFT02865.1;transl_table=11 KV790783.1 Genbank gene 14328 15038 . + . ID=gene-HMPREF3107_02515;Name=HMPREF3107_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02515 KV790783.1 Protein Homology CDS 14328 15038 . + 0 ID=cds-OFT02866.1;Parent=gene-HMPREF3107_02515;Dbxref=NCBI_GP:OFT02866.1;Name=OFT02866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779331.1;locus_tag=HMPREF3107_02515;product=SAM-dependent methyltransferase;protein_id=OFT02866.1;transl_table=11 KV790783.1 Genbank gene 15043 15669 . + . ID=gene-HMPREF3107_02520;Name=HMPREF3107_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02520 KV790783.1 Protein Homology CDS 15043 15669 . + 0 ID=cds-OFT02867.1;Parent=gene-HMPREF3107_02520;Dbxref=NCBI_GP:OFT02867.1;Name=OFT02867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746266.1;locus_tag=HMPREF3107_02520;product=hypothetical protein;protein_id=OFT02867.1;transl_table=11 KV790783.1 Genbank gene 15790 16374 . + . ID=gene-HMPREF3107_02525;Name=HMPREF3107_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02525 KV790783.1 Protein Homology CDS 15790 16374 . + 0 ID=cds-OFT02886.1;Parent=gene-HMPREF3107_02525;Dbxref=NCBI_GP:OFT02886.1;Name=OFT02886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762719.1;locus_tag=HMPREF3107_02525;product=hypothetical protein;protein_id=OFT02886.1;transl_table=11 KV790783.1 Genbank gene 16377 16880 . + . ID=gene-HMPREF3107_02530;Name=HMPREF3107_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02530 KV790783.1 Protein Homology CDS 16377 16880 . + 0 ID=cds-OFT02868.1;Parent=gene-HMPREF3107_02530;Dbxref=NCBI_GP:OFT02868.1;Name=OFT02868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771209.1;locus_tag=HMPREF3107_02530;product=hypothetical protein;protein_id=OFT02868.1;transl_table=11 KV790783.1 Genbank gene 16982 19813 . + . ID=gene-HMPREF3107_02535;Name=HMPREF3107_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02535 KV790783.1 Protein Homology CDS 16982 19813 . + 0 ID=cds-OFT02869.1;Parent=gene-HMPREF3107_02535;Dbxref=NCBI_GP:OFT02869.1;Name=OFT02869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173261.1;locus_tag=HMPREF3107_02535;product=ABC transporter;protein_id=OFT02869.1;transl_table=11 KV790783.1 Genbank gene 19891 20241 . + . ID=gene-HMPREF3107_02540;Name=HMPREF3107_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02540 KV790783.1 Protein Homology CDS 19891 20241 . + 0 ID=cds-OFT02870.1;Parent=gene-HMPREF3107_02540;Dbxref=NCBI_GP:OFT02870.1;Name=OFT02870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312027.1;locus_tag=HMPREF3107_02540;product=MmcQ protein;protein_id=OFT02870.1;transl_table=11 KV790783.1 Genbank gene 20279 20971 . + . ID=gene-HMPREF3107_02545;Name=HMPREF3107_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02545 KV790783.1 Protein Homology CDS 20279 20971 . + 0 ID=cds-OFT02871.1;Parent=gene-HMPREF3107_02545;Dbxref=NCBI_GP:OFT02871.1;Name=OFT02871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173263.1;locus_tag=HMPREF3107_02545;product=racemase;protein_id=OFT02871.1;transl_table=11 KV790783.1 Genbank gene 21079 22191 . + . ID=gene-HMPREF3107_02550;Name=HMPREF3107_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02550 KV790783.1 Protein Homology CDS 21079 22191 . + 0 ID=cds-OFT02872.1;Parent=gene-HMPREF3107_02550;Dbxref=NCBI_GP:OFT02872.1;Name=OFT02872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173264.1;locus_tag=HMPREF3107_02550;product=hypothetical protein;protein_id=OFT02872.1;transl_table=11 KV790783.1 Genbank gene 22281 22961 . + . ID=gene-HMPREF3107_02555;Name=HMPREF3107_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02555 KV790783.1 Protein Homology CDS 22281 22961 . + 0 ID=cds-OFT02873.1;Parent=gene-HMPREF3107_02555;Dbxref=NCBI_GP:OFT02873.1;Name=OFT02873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016420541.1;locus_tag=HMPREF3107_02555;product=GNAT family acetyltransferase;protein_id=OFT02873.1;transl_table=11 KV790783.1 Genbank gene 23000 23890 . + . ID=gene-HMPREF3107_02560;Name=HMPREF3107_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02560 KV790783.1 Protein Homology CDS 23000 23890 . + 0 ID=cds-OFT02874.1;Parent=gene-HMPREF3107_02560;Dbxref=NCBI_GP:OFT02874.1;Name=OFT02874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771199.1;locus_tag=HMPREF3107_02560;product=polyphosphate kinase 2;protein_id=OFT02874.1;transl_table=11 KV790783.1 Genbank gene 23963 24289 . - . ID=gene-HMPREF3107_02565;Name=HMPREF3107_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02565 KV790783.1 Protein Homology CDS 23963 24289 . - 0 ID=cds-OFT02875.1;Parent=gene-HMPREF3107_02565;Dbxref=NCBI_GP:OFT02875.1;Name=OFT02875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686426.1;locus_tag=HMPREF3107_02565;product=stress response protein;protein_id=OFT02875.1;transl_table=11 KV790783.1 Genbank gene 24570 26036 . + . ID=gene-HMPREF3107_02570;Name=HMPREF3107_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02570 KV790783.1 Protein Homology CDS 24570 26036 . + 0 ID=cds-OFT02876.1;Parent=gene-HMPREF3107_02570;Dbxref=NCBI_GP:OFT02876.1;Name=OFT02876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771197.1;locus_tag=HMPREF3107_02570;product=hypothetical protein;protein_id=OFT02876.1;transl_table=11 KV790783.1 Genbank gene 26285 27817 . - . ID=gene-HMPREF3107_02575;Name=HMPREF3107_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02575 KV790783.1 Protein Homology CDS 26285 27817 . - 0 ID=cds-OFT02887.1;Parent=gene-HMPREF3107_02575;Dbxref=NCBI_GP:OFT02887.1;Name=OFT02887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748746.1;locus_tag=HMPREF3107_02575;product=hypothetical protein;protein_id=OFT02887.1;transl_table=11 KV790783.1 Genbank gene 28253 30070 . + . ID=gene-HMPREF3107_02580;Name=HMPREF3107_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02580 KV790783.1 Protein Homology CDS 28253 30070 . + 0 ID=cds-OFT02877.1;Parent=gene-HMPREF3107_02580;Dbxref=NCBI_GP:OFT02877.1;Name=OFT02877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426838.1;locus_tag=HMPREF3107_02580;product=peptidylprolyl isomerase;protein_id=OFT02877.1;transl_table=11 KV790783.1 Genbank gene 30201 30782 . + . ID=gene-HMPREF3107_02585;Name=HMPREF3107_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02585 KV790783.1 Protein Homology CDS 30201 30782 . + 0 ID=cds-OFT02878.1;Parent=gene-HMPREF3107_02585;Dbxref=NCBI_GP:OFT02878.1;Name=OFT02878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580810.1;locus_tag=HMPREF3107_02585;product=hypothetical protein;protein_id=OFT02878.1;transl_table=11 KV790783.1 Genbank gene 30864 31814 . + . ID=gene-HMPREF3107_02590;Name=HMPREF3107_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02590 KV790783.1 Protein Homology CDS 30864 31814 . + 0 ID=cds-OFT02879.1;Parent=gene-HMPREF3107_02590;Dbxref=NCBI_GP:OFT02879.1;Name=OFT02879.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342427.1;locus_tag=HMPREF3107_02590;product=thioredoxin-disulfide reductase;protein_id=OFT02879.1;transl_table=11 KV790783.1 Genbank gene 31891 32382 . + . ID=gene-HMPREF3107_02595;Name=HMPREF3107_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02595 KV790783.1 Protein Homology CDS 31891 32382 . + 0 ID=cds-OFT02880.1;Parent=gene-HMPREF3107_02595;Dbxref=NCBI_GP:OFT02880.1;Name=OFT02880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117147.1;locus_tag=HMPREF3107_02595;product=peptidylprolyl isomerase;protein_id=OFT02880.1;transl_table=11 KV790783.1 Genbank gene 32479 33549 . + . ID=gene-HMPREF3107_02600;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HMPREF3107_02600 KV790783.1 Protein Homology CDS 32479 33549 . + 0 ID=cds-OFT02881.1;Parent=gene-HMPREF3107_02600;Dbxref=NCBI_GP:OFT02881.1;Name=OFT02881.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009119521.1;locus_tag=HMPREF3107_02600;product=DNA recombination/repair protein RecA;protein_id=OFT02881.1;transl_table=11 KV790783.1 Genbank gene 33884 34516 . + . ID=gene-HMPREF3107_02605;Name=HMPREF3107_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02605 KV790783.1 Protein Homology CDS 33884 34516 . + 0 ID=cds-OFT02882.1;Parent=gene-HMPREF3107_02605;Dbxref=NCBI_GP:OFT02882.1;Name=OFT02882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770708.1;locus_tag=HMPREF3107_02605;product=sugar ABC transporter permease;protein_id=OFT02882.1;transl_table=11 KV790783.1 Genbank gene 34785 35660 . - . ID=gene-HMPREF3107_02610;Name=HMPREF3107_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02610 KV790783.1 GeneMarkS+ CDS 34785 35660 . - 0 ID=cds-OFT02883.1;Parent=gene-HMPREF3107_02610;Dbxref=NCBI_GP:OFT02883.1;Name=OFT02883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02610;product=hypothetical protein;protein_id=OFT02883.1;transl_table=11 KV790783.1 Genbank pseudogene 35842 36171 . + . ID=gene-HMPREF3107_02615;Name=HMPREF3107_02615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02615;pseudo=true KV790783.1 Protein Homology CDS 35842 36171 . + 0 ID=cds-HMPREF3107_02615;Parent=gene-HMPREF3107_02615;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580667.1;locus_tag=HMPREF3107_02615;product=hypothetical protein;pseudo=true;transl_table=11 KV790783.1 Genbank gene 36168 37022 . + . ID=gene-HMPREF3107_02620;Name=HMPREF3107_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02620 KV790783.1 Protein Homology CDS 36168 37022 . + 0 ID=cds-OFT02884.1;Parent=gene-HMPREF3107_02620;Dbxref=NCBI_GP:OFT02884.1;Name=OFT02884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357642.1;locus_tag=HMPREF3107_02620;product=hypothetical protein;protein_id=OFT02884.1;transl_table=11 ##sequence-region KV790784.1 1 49830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790784.1 Genbank region 1 49830 . + . ID=KV790784.1:1..49830;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790784.1 Genbank gene 313 2166 . - . ID=gene-HMPREF3107_02625;Name=HMPREF3107_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02625 KV790784.1 Protein Homology CDS 313 2166 . - 0 ID=cds-OFT02804.1;Parent=gene-HMPREF3107_02625;Dbxref=NCBI_GP:OFT02804.1;Name=OFT02804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519251.1;locus_tag=HMPREF3107_02625;product=Fe-S protein assembly chaperone HscA;protein_id=OFT02804.1;transl_table=11 KV790784.1 Genbank gene 2208 2708 . - . ID=gene-HMPREF3107_02630;Name=HMPREF3107_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02630 KV790784.1 Protein Homology CDS 2208 2708 . - 0 ID=cds-OFT02805.1;Parent=gene-HMPREF3107_02630;Dbxref=NCBI_GP:OFT02805.1;Name=OFT02805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248857.1;locus_tag=HMPREF3107_02630;product=Fe-S protein assembly co-chaperone HscB;protein_id=OFT02805.1;transl_table=11 KV790784.1 Genbank gene 2908 3138 . + . ID=gene-HMPREF3107_02635;Name=HMPREF3107_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02635 KV790784.1 Protein Homology CDS 2908 3138 . + 0 ID=cds-OFT02806.1;Parent=gene-HMPREF3107_02635;Dbxref=NCBI_GP:OFT02806.1;Name=OFT02806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685510.1;locus_tag=HMPREF3107_02635;product=hypothetical protein;protein_id=OFT02806.1;transl_table=11 KV790784.1 Genbank gene 3106 3426 . - . ID=gene-HMPREF3107_02640;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=HMPREF3107_02640 KV790784.1 Protein Homology CDS 3106 3426 . - 0 ID=cds-OFT02807.1;Parent=gene-HMPREF3107_02640;Dbxref=NCBI_GP:OFT02807.1;Name=OFT02807.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019882636.1;locus_tag=HMPREF3107_02640;product=iron-sulfur cluster assembly protein IscA;protein_id=OFT02807.1;transl_table=11 KV790784.1 Genbank gene 3473 3727 . - . ID=gene-HMPREF3107_02645;Name=HMPREF3107_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02645 KV790784.1 Protein Homology CDS 3473 3727 . - 0 ID=cds-OFT02808.1;Parent=gene-HMPREF3107_02645;Dbxref=NCBI_GP:OFT02808.1;Name=OFT02808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770452.1;locus_tag=HMPREF3107_02645;product=recombinase RecA;protein_id=OFT02808.1;transl_table=11 KV790784.1 Genbank gene 3869 4255 . - . ID=gene-HMPREF3107_02650;Name=HMPREF3107_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02650 KV790784.1 Protein Homology CDS 3869 4255 . - 0 ID=cds-OFT02809.1;Parent=gene-HMPREF3107_02650;Dbxref=NCBI_GP:OFT02809.1;Name=OFT02809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770455.1;locus_tag=HMPREF3107_02650;product=Fe-S cluster assembly scaffold IscU;protein_id=OFT02809.1;transl_table=11 KV790784.1 Genbank gene 4696 5010 . - . ID=gene-HMPREF3107_02655;Name=HMPREF3107_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02655 KV790784.1 Protein Homology CDS 4696 5010 . - 0 ID=cds-OFT02810.1;Parent=gene-HMPREF3107_02655;Dbxref=NCBI_GP:OFT02810.1;Name=OFT02810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688887.1;locus_tag=HMPREF3107_02655;product=hypothetical protein;protein_id=OFT02810.1;transl_table=11 KV790784.1 Genbank gene 4995 6209 . - . ID=gene-HMPREF3107_02660;Name=HMPREF3107_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02660 KV790784.1 Protein Homology CDS 4995 6209 . - 0 ID=cds-OFT02811.1;Parent=gene-HMPREF3107_02660;Dbxref=NCBI_GP:OFT02811.1;Name=OFT02811.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687546.1;locus_tag=HMPREF3107_02660;product=cysteine desulfurase IscS;protein_id=OFT02811.1;transl_table=11 KV790784.1 Genbank gene 6236 6679 . - . ID=gene-HMPREF3107_02665;Name=HMPREF3107_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02665 KV790784.1 Protein Homology CDS 6236 6679 . - 0 ID=cds-OFT02812.1;Parent=gene-HMPREF3107_02665;Dbxref=NCBI_GP:OFT02812.1;Name=OFT02812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519894.1;locus_tag=HMPREF3107_02665;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=OFT02812.1;transl_table=11 KV790784.1 Genbank gene 6910 8079 . + . ID=gene-HMPREF3107_02670;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=HMPREF3107_02670 KV790784.1 Protein Homology CDS 6910 8079 . + 0 ID=cds-OFT02813.1;Parent=gene-HMPREF3107_02670;Dbxref=NCBI_GP:OFT02813.1;Name=OFT02813.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425388.1;locus_tag=HMPREF3107_02670;product=alpha-hydroxy-acid oxidizing enzyme;protein_id=OFT02813.1;transl_table=11 KV790784.1 Genbank gene 8208 9245 . - . ID=gene-HMPREF3107_02675;Name=HMPREF3107_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02675 KV790784.1 Protein Homology CDS 8208 9245 . - 0 ID=cds-OFT02814.1;Parent=gene-HMPREF3107_02675;Dbxref=NCBI_GP:OFT02814.1;Name=OFT02814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770466.1;locus_tag=HMPREF3107_02675;product=deacetylase;protein_id=OFT02814.1;transl_table=11 KV790784.1 Genbank gene 9512 11197 . - . ID=gene-HMPREF3107_02680;Name=HMPREF3107_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02680 KV790784.1 Protein Homology CDS 9512 11197 . - 0 ID=cds-OFT02815.1;Parent=gene-HMPREF3107_02680;Dbxref=NCBI_GP:OFT02815.1;Name=OFT02815.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425252.1;locus_tag=HMPREF3107_02680;product=long-chain-fatty-acid--CoA ligase;protein_id=OFT02815.1;transl_table=11 KV790784.1 Genbank gene 11276 12379 . - . ID=gene-HMPREF3107_02685;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=HMPREF3107_02685 KV790784.1 Protein Homology CDS 11276 12379 . - 0 ID=cds-OFT02816.1;Parent=gene-HMPREF3107_02685;Dbxref=NCBI_GP:OFT02816.1;Name=OFT02816.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754482.1;locus_tag=HMPREF3107_02685;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=OFT02816.1;transl_table=11 KV790784.1 Genbank gene 12553 12628 . + . ID=gene-HMPREF3107_02690;Name=HMPREF3107_02690;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_02690 KV790784.1 tRNAscan-SE tRNA 12553 12628 . + . ID=rna-HMPREF3107_02690;Parent=gene-HMPREF3107_02690;anticodon=(pos:12586..12588);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_02690;product=tRNA-Met KV790784.1 tRNAscan-SE exon 12553 12628 . + . ID=exon-HMPREF3107_02690-1;Parent=rna-HMPREF3107_02690;anticodon=(pos:12586..12588);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_02690;product=tRNA-Met KV790784.1 Genbank gene 13019 13471 . - . ID=gene-HMPREF3107_02695;Name=HMPREF3107_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02695 KV790784.1 GeneMarkS+ CDS 13019 13471 . - 0 ID=cds-OFT02817.1;Parent=gene-HMPREF3107_02695;Dbxref=NCBI_GP:OFT02817.1;Name=OFT02817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02695;product=hypothetical protein;protein_id=OFT02817.1;transl_table=11 KV790784.1 Genbank gene 13596 13886 . - . ID=gene-HMPREF3107_02700;Name=HMPREF3107_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02700 KV790784.1 Protein Homology CDS 13596 13886 . - 0 ID=cds-OFT02818.1;Parent=gene-HMPREF3107_02700;Dbxref=NCBI_GP:OFT02818.1;Name=OFT02818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232332.1;locus_tag=HMPREF3107_02700;product=DNA-binding protein;protein_id=OFT02818.1;transl_table=11 KV790784.1 Genbank gene 14191 14562 . + . ID=gene-HMPREF3107_02705;Name=HMPREF3107_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02705 KV790784.1 Protein Homology CDS 14191 14562 . + 0 ID=cds-OFT02819.1;Parent=gene-HMPREF3107_02705;Dbxref=NCBI_GP:OFT02819.1;Name=OFT02819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688243.1;locus_tag=HMPREF3107_02705;product=transcriptional regulator;protein_id=OFT02819.1;transl_table=11 KV790784.1 Genbank gene 14564 15187 . + . ID=gene-HMPREF3107_02710;Name=HMPREF3107_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02710 KV790784.1 Protein Homology CDS 14564 15187 . + 0 ID=cds-OFT02854.1;Parent=gene-HMPREF3107_02710;Dbxref=NCBI_GP:OFT02854.1;Name=OFT02854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222574.1;locus_tag=HMPREF3107_02710;product=hypothetical protein;protein_id=OFT02854.1;transl_table=11 KV790784.1 Genbank pseudogene 15180 15375 . + . ID=gene-HMPREF3107_02715;Name=HMPREF3107_02715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02715;pseudo=true KV790784.1 Protein Homology CDS 15180 15375 . + 0 ID=cds-HMPREF3107_02715;Parent=gene-HMPREF3107_02715;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233797.1;locus_tag=HMPREF3107_02715;product=hypothetical protein;pseudo=true;transl_table=11 KV790784.1 Genbank gene 15430 16398 . + . ID=gene-HMPREF3107_02720;Name=HMPREF3107_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02720 KV790784.1 Protein Homology CDS 15430 16398 . + 0 ID=cds-OFT02820.1;Parent=gene-HMPREF3107_02720;Dbxref=NCBI_GP:OFT02820.1;Name=OFT02820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213684.1;locus_tag=HMPREF3107_02720;product=hypothetical protein;protein_id=OFT02820.1;transl_table=11 KV790784.1 Genbank gene 16395 16877 . + . ID=gene-HMPREF3107_02725;Name=HMPREF3107_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02725 KV790784.1 Protein Homology CDS 16395 16877 . + 0 ID=cds-OFT02821.1;Parent=gene-HMPREF3107_02725;Dbxref=NCBI_GP:OFT02821.1;Name=OFT02821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213683.1;locus_tag=HMPREF3107_02725;product=hypothetical protein;protein_id=OFT02821.1;transl_table=11 KV790784.1 Genbank gene 16967 17464 . + . ID=gene-HMPREF3107_02730;Name=HMPREF3107_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02730 KV790784.1 Protein Homology CDS 16967 17464 . + 0 ID=cds-OFT02822.1;Parent=gene-HMPREF3107_02730;Dbxref=NCBI_GP:OFT02822.1;Name=OFT02822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761667.1;locus_tag=HMPREF3107_02730;product=peptidoglycan domain protein;protein_id=OFT02822.1;transl_table=11 KV790784.1 Genbank gene 17448 17834 . + . ID=gene-HMPREF3107_02735;Name=HMPREF3107_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02735 KV790784.1 GeneMarkS+ CDS 17448 17834 . + 0 ID=cds-OFT02823.1;Parent=gene-HMPREF3107_02735;Dbxref=NCBI_GP:OFT02823.1;Name=OFT02823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02735;product=hypothetical protein;protein_id=OFT02823.1;transl_table=11 KV790784.1 Genbank gene 17830 18033 . + . ID=gene-HMPREF3107_02740;Name=HMPREF3107_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02740 KV790784.1 Protein Homology CDS 17830 18033 . + 0 ID=cds-OFT02855.1;Parent=gene-HMPREF3107_02740;Dbxref=NCBI_GP:OFT02855.1;Name=OFT02855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282956.1;locus_tag=HMPREF3107_02740;product=hypothetical protein;protein_id=OFT02855.1;transl_table=11 KV790784.1 Genbank gene 18235 18555 . + . ID=gene-HMPREF3107_02745;Name=HMPREF3107_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02745 KV790784.1 Protein Homology CDS 18235 18555 . + 0 ID=cds-OFT02824.1;Parent=gene-HMPREF3107_02745;Dbxref=NCBI_GP:OFT02824.1;Name=OFT02824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448349.1;locus_tag=HMPREF3107_02745;product=hypothetical protein;protein_id=OFT02824.1;transl_table=11 KV790784.1 Genbank pseudogene 18552 18779 . + . ID=gene-HMPREF3107_02750;Name=HMPREF3107_02750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02750;pseudo=true KV790784.1 Protein Homology CDS 18552 18779 . + 0 ID=cds-HMPREF3107_02750;Parent=gene-HMPREF3107_02750;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282953.1;locus_tag=HMPREF3107_02750;product=hypothetical protein;pseudo=true;transl_table=11 KV790784.1 Genbank pseudogene 18794 19120 . + . ID=gene-HMPREF3107_02755;Name=HMPREF3107_02755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02755;pseudo=true KV790784.1 Protein Homology CDS 18794 19120 . + 0 ID=cds-HMPREF3107_02755;Parent=gene-HMPREF3107_02755;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753475.1;locus_tag=HMPREF3107_02755;product=phage head morphogenesis protein;pseudo=true;transl_table=11 KV790784.1 Genbank gene 19123 19566 . + . ID=gene-HMPREF3107_02760;Name=HMPREF3107_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02760 KV790784.1 Protein Homology CDS 19123 19566 . + 0 ID=cds-OFT02825.1;Parent=gene-HMPREF3107_02760;Dbxref=NCBI_GP:OFT02825.1;Name=OFT02825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426260.1;locus_tag=HMPREF3107_02760;product=phage morphogenesis protein;protein_id=OFT02825.1;transl_table=11 KV790784.1 Genbank gene 19869 21254 . - . ID=gene-HMPREF3107_02765;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=HMPREF3107_02765 KV790784.1 Protein Homology CDS 19869 21254 . - 0 ID=cds-OFT02826.1;Parent=gene-HMPREF3107_02765;Dbxref=NCBI_GP:OFT02826.1;Name=OFT02826.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676645.1;locus_tag=HMPREF3107_02765;product=NAD(P) transhydrogenase subunit beta;protein_id=OFT02826.1;transl_table=11 KV790784.1 Genbank gene 21353 22894 . - . ID=gene-HMPREF3107_02770;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=HMPREF3107_02770 KV790784.1 Protein Homology CDS 21353 22894 . - 0 ID=cds-OFT02827.1;Parent=gene-HMPREF3107_02770;Dbxref=NCBI_GP:OFT02827.1;Name=OFT02827.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002246831.1;locus_tag=HMPREF3107_02770;product=NAD(P) transhydrogenase subunit alpha;protein_id=OFT02827.1;transl_table=11 KV790784.1 Genbank gene 23182 23589 . + . ID=gene-HMPREF3107_02775;Name=HMPREF3107_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02775 KV790784.1 Protein Homology CDS 23182 23589 . + 0 ID=cds-OFT02828.1;Parent=gene-HMPREF3107_02775;Dbxref=NCBI_GP:OFT02828.1;Name=OFT02828.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425306.1;locus_tag=HMPREF3107_02775;product=lactoylglutathione lyase;protein_id=OFT02828.1;transl_table=11 KV790784.1 Genbank gene 23674 24966 . - . ID=gene-HMPREF3107_02780;Name=HMPREF3107_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02780 KV790784.1 Protein Homology CDS 23674 24966 . - 0 ID=cds-OFT02829.1;Parent=gene-HMPREF3107_02780;Dbxref=NCBI_GP:OFT02829.1;Name=OFT02829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448595.1;locus_tag=HMPREF3107_02780;product=serine--tRNA ligase;protein_id=OFT02829.1;transl_table=11 KV790784.1 Genbank gene 25089 26501 . - . ID=gene-HMPREF3107_02785;Name=HMPREF3107_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02785 KV790784.1 Protein Homology CDS 25089 26501 . - 0 ID=cds-OFT02830.1;Parent=gene-HMPREF3107_02785;Dbxref=NCBI_GP:OFT02830.1;Name=OFT02830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781927.1;locus_tag=HMPREF3107_02785;product=anion:sodium symporter;protein_id=OFT02830.1;transl_table=11 KV790784.1 Genbank gene 26681 27124 . - . ID=gene-HMPREF3107_02790;Name=HMPREF3107_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02790 KV790784.1 GeneMarkS+ CDS 26681 27124 . - 0 ID=cds-OFT02831.1;Parent=gene-HMPREF3107_02790;Dbxref=NCBI_GP:OFT02831.1;Name=OFT02831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02790;product=hypothetical protein;protein_id=OFT02831.1;transl_table=11 KV790784.1 Genbank gene 27143 27340 . - . ID=gene-HMPREF3107_02795;Name=HMPREF3107_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02795 KV790784.1 GeneMarkS+ CDS 27143 27340 . - 0 ID=cds-OFT02832.1;Parent=gene-HMPREF3107_02795;Dbxref=NCBI_GP:OFT02832.1;Name=OFT02832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02795;product=hypothetical protein;protein_id=OFT02832.1;transl_table=11 KV790784.1 Genbank gene 27406 27900 . - . ID=gene-HMPREF3107_02800;Name=HMPREF3107_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02800 KV790784.1 Protein Homology CDS 27406 27900 . - 0 ID=cds-OFT02833.1;Parent=gene-HMPREF3107_02800;Dbxref=NCBI_GP:OFT02833.1;Name=OFT02833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770536.1;locus_tag=HMPREF3107_02800;product=hypothetical protein;protein_id=OFT02833.1;transl_table=11 KV790784.1 Genbank pseudogene 28005 28283 . - . ID=gene-HMPREF3107_02805;Name=HMPREF3107_02805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02805;pseudo=true KV790784.1 Protein Homology CDS 28005 28283 . - 0 ID=cds-HMPREF3107_02805;Parent=gene-HMPREF3107_02805;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781936.1;locus_tag=HMPREF3107_02805;product=hypothetical protein;pseudo=true;transl_table=11 KV790784.1 Genbank gene 28334 29959 . - . ID=gene-HMPREF3107_02810;Name=HMPREF3107_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02810 KV790784.1 Protein Homology CDS 28334 29959 . - 0 ID=cds-OFT02834.1;Parent=gene-HMPREF3107_02810;Dbxref=NCBI_GP:OFT02834.1;Name=OFT02834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641409.1;locus_tag=HMPREF3107_02810;product=ABC-F family ATPase;protein_id=OFT02834.1;transl_table=11 KV790784.1 Genbank gene 30060 30551 . - . ID=gene-HMPREF3107_02815;Name=HMPREF3107_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02815 KV790784.1 Protein Homology CDS 30060 30551 . - 0 ID=cds-OFT02835.1;Parent=gene-HMPREF3107_02815;Dbxref=NCBI_GP:OFT02835.1;Name=OFT02835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770543.1;locus_tag=HMPREF3107_02815;product=hypothetical protein;protein_id=OFT02835.1;transl_table=11 KV790784.1 Genbank gene 30691 31797 . - . ID=gene-HMPREF3107_02820;Name=HMPREF3107_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02820 KV790784.1 Protein Homology CDS 30691 31797 . - 0 ID=cds-OFT02836.1;Parent=gene-HMPREF3107_02820;Dbxref=NCBI_GP:OFT02836.1;Name=OFT02836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770545.1;locus_tag=HMPREF3107_02820;product=rod shape-determining protein RodA;protein_id=OFT02836.1;transl_table=11 KV790784.1 Genbank gene 31794 33848 . - . ID=gene-HMPREF3107_02825;Name=HMPREF3107_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02825 KV790784.1 Protein Homology CDS 31794 33848 . - 0 ID=cds-OFT02837.1;Parent=gene-HMPREF3107_02825;Dbxref=NCBI_GP:OFT02837.1;Name=OFT02837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770547.1;locus_tag=HMPREF3107_02825;product=penicillin-binding protein 2;protein_id=OFT02837.1;transl_table=11 KV790784.1 Genbank gene 33845 34348 . - . ID=gene-HMPREF3107_02830;Name=HMPREF3107_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02830 KV790784.1 Protein Homology CDS 33845 34348 . - 0 ID=cds-OFT02838.1;Parent=gene-HMPREF3107_02830;Dbxref=NCBI_GP:OFT02838.1;Name=OFT02838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770550.1;locus_tag=HMPREF3107_02830;product=rod shape-determining protein MreD;protein_id=OFT02838.1;transl_table=11 KV790784.1 Genbank gene 34355 35230 . - . ID=gene-HMPREF3107_02835;Name=HMPREF3107_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02835 KV790784.1 Protein Homology CDS 34355 35230 . - 0 ID=cds-OFT02839.1;Parent=gene-HMPREF3107_02835;Dbxref=NCBI_GP:OFT02839.1;Name=OFT02839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770552.1;locus_tag=HMPREF3107_02835;product=rod shape-determining protein MreC;protein_id=OFT02839.1;transl_table=11 KV790784.1 Genbank gene 35249 36292 . - . ID=gene-HMPREF3107_02840;Name=HMPREF3107_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02840 KV790784.1 Protein Homology CDS 35249 36292 . - 0 ID=cds-OFT02840.1;Parent=gene-HMPREF3107_02840;Dbxref=NCBI_GP:OFT02840.1;Name=OFT02840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770554.1;locus_tag=HMPREF3107_02840;product=rod shape-determining protein;protein_id=OFT02840.1;transl_table=11 KV790784.1 Genbank gene 36489 36779 . + . ID=gene-HMPREF3107_02845;Name=HMPREF3107_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02845 KV790784.1 Protein Homology CDS 36489 36779 . + 0 ID=cds-OFT02841.1;Parent=gene-HMPREF3107_02845;Dbxref=NCBI_GP:OFT02841.1;Name=OFT02841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117012.1;locus_tag=HMPREF3107_02845;product=asparaginyl/glutamyl-tRNA amidotransferase subunit C;protein_id=OFT02841.1;transl_table=11 KV790784.1 Genbank gene 36809 37294 . + . ID=gene-HMPREF3107_02850;Name=HMPREF3107_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02850 KV790784.1 Protein Homology CDS 36809 37294 . + 0 ID=cds-OFT02856.1;Parent=gene-HMPREF3107_02850;Dbxref=NCBI_GP:OFT02856.1;Name=OFT02856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312922.1;locus_tag=HMPREF3107_02850;product=hypothetical protein;protein_id=OFT02856.1;transl_table=11 KV790784.1 Genbank pseudogene 37512 38022 . + . ID=gene-HMPREF3107_02855;Name=HMPREF3107_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_02855;pseudo=true KV790784.1 Protein Homology CDS 37512 38022 . + 0 ID=cds-HMPREF3107_02855;Parent=gene-HMPREF3107_02855;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312920.1;locus_tag=HMPREF3107_02855;product=hypothetical protein;pseudo=true;transl_table=11 KV790784.1 Genbank gene 38146 38724 . + . ID=gene-HMPREF3107_02860;Name=HMPREF3107_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02860 KV790784.1 Protein Homology CDS 38146 38724 . + 0 ID=cds-OFT02842.1;Parent=gene-HMPREF3107_02860;Dbxref=NCBI_GP:OFT02842.1;Name=OFT02842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763632.1;locus_tag=HMPREF3107_02860;product=hypothetical protein;protein_id=OFT02842.1;transl_table=11 KV790784.1 Genbank gene 38802 40250 . + . ID=gene-HMPREF3107_02865;Name=HMPREF3107_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02865 KV790784.1 Protein Homology CDS 38802 40250 . + 0 ID=cds-OFT02843.1;Parent=gene-HMPREF3107_02865;Dbxref=NCBI_GP:OFT02843.1;Name=OFT02843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770565.1;locus_tag=HMPREF3107_02865;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=OFT02843.1;transl_table=11 KV790784.1 Genbank gene 40456 40908 . + . ID=gene-HMPREF3107_02870;Name=HMPREF3107_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02870 KV790784.1 GeneMarkS+ CDS 40456 40908 . + 0 ID=cds-OFT02844.1;Parent=gene-HMPREF3107_02870;Dbxref=NCBI_GP:OFT02844.1;Name=OFT02844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02870;product=hypothetical protein;protein_id=OFT02844.1;transl_table=11 KV790784.1 Genbank gene 41044 41400 . + . ID=gene-HMPREF3107_02875;Name=HMPREF3107_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02875 KV790784.1 Protein Homology CDS 41044 41400 . + 0 ID=cds-OFT02845.1;Parent=gene-HMPREF3107_02875;Dbxref=NCBI_GP:OFT02845.1;Name=OFT02845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115546.1;locus_tag=HMPREF3107_02875;product=hypothetical protein;protein_id=OFT02845.1;transl_table=11 KV790784.1 Genbank gene 41415 42035 . + . ID=gene-HMPREF3107_02880;Name=HMPREF3107_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02880 KV790784.1 Protein Homology CDS 41415 42035 . + 0 ID=cds-OFT02846.1;Parent=gene-HMPREF3107_02880;Dbxref=NCBI_GP:OFT02846.1;Name=OFT02846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824373.1;locus_tag=HMPREF3107_02880;product=hypothetical protein;protein_id=OFT02846.1;transl_table=11 KV790784.1 Genbank gene 42246 43676 . + . ID=gene-HMPREF3107_02885;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HMPREF3107_02885 KV790784.1 Protein Homology CDS 42246 43676 . + 0 ID=cds-OFT02847.1;Parent=gene-HMPREF3107_02885;Dbxref=NCBI_GP:OFT02847.1;Name=OFT02847.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756307.1;locus_tag=HMPREF3107_02885;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=OFT02847.1;transl_table=11 KV790784.1 Genbank gene 43801 44049 . + . ID=gene-HMPREF3107_02890;Name=HMPREF3107_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02890 KV790784.1 GeneMarkS+ CDS 43801 44049 . + 0 ID=cds-OFT02848.1;Parent=gene-HMPREF3107_02890;Dbxref=NCBI_GP:OFT02848.1;Name=OFT02848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02890;product=hypothetical protein;protein_id=OFT02848.1;transl_table=11 KV790784.1 Genbank gene 44207 45145 . + . ID=gene-HMPREF3107_02895;Name=HMPREF3107_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02895 KV790784.1 Protein Homology CDS 44207 45145 . + 0 ID=cds-OFT02849.1;Parent=gene-HMPREF3107_02895;Dbxref=NCBI_GP:OFT02849.1;Name=OFT02849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784704.1;locus_tag=HMPREF3107_02895;product=nuclease;protein_id=OFT02849.1;transl_table=11 KV790784.1 Genbank gene 45270 45479 . + . ID=gene-HMPREF3107_02900;Name=HMPREF3107_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02900 KV790784.1 GeneMarkS+ CDS 45270 45479 . + 0 ID=cds-OFT02850.1;Parent=gene-HMPREF3107_02900;Dbxref=NCBI_GP:OFT02850.1;Name=OFT02850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02900;product=hypothetical protein;protein_id=OFT02850.1;transl_table=11 KV790784.1 Genbank gene 45625 46161 . - . ID=gene-HMPREF3107_02905;Name=HMPREF3107_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02905 KV790784.1 Protein Homology CDS 45625 46161 . - 0 ID=cds-OFT02851.1;Parent=gene-HMPREF3107_02905;Dbxref=NCBI_GP:OFT02851.1;Name=OFT02851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770585.1;locus_tag=HMPREF3107_02905;product=hypothetical protein;protein_id=OFT02851.1;transl_table=11 KV790784.1 Genbank gene 46231 46518 . + . ID=gene-HMPREF3107_02910;Name=HMPREF3107_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02910 KV790784.1 Protein Homology CDS 46231 46518 . + 0 ID=cds-OFT02852.1;Parent=gene-HMPREF3107_02910;Dbxref=NCBI_GP:OFT02852.1;Name=OFT02852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770587.1;locus_tag=HMPREF3107_02910;product=hypothetical protein;protein_id=OFT02852.1;transl_table=11 KV790784.1 Genbank gene 46583 47227 . + . ID=gene-HMPREF3107_02915;Name=HMPREF3107_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02915 KV790784.1 GeneMarkS+ CDS 46583 47227 . + 0 ID=cds-OFT02853.1;Parent=gene-HMPREF3107_02915;Dbxref=NCBI_GP:OFT02853.1;Name=OFT02853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02915;product=hypothetical protein;protein_id=OFT02853.1;transl_table=11 KV790784.1 Genbank pseudogene 47296 47874 . - . ID=gene-HMPREF3107_02920;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=pseudogene;locus_tag=HMPREF3107_02920;pseudo=true KV790784.1 Protein Homology CDS 47296 47874 . - 0 ID=cds-HMPREF3107_02920;Parent=gene-HMPREF3107_02920;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis%3B internal stop;gbkey=CDS;gene=mogA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744807.1;locus_tag=HMPREF3107_02920;product=molybdopterin adenylyltransferase;pseudo=true;transl_table=11 KV790784.1 Genbank gene 48234 48800 . - . ID=gene-HMPREF3107_02925;Name=HMPREF3107_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02925 KV790784.1 Protein Homology CDS 48234 48800 . - 0 ID=cds-OFT02857.1;Parent=gene-HMPREF3107_02925;Dbxref=NCBI_GP:OFT02857.1;Name=OFT02857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770597.1;locus_tag=HMPREF3107_02925;product=molybdopterin dinucleotide-binding protein;protein_id=OFT02857.1;transl_table=11 KV790784.1 Genbank pseudogene 48971 49783 . - . ID=gene-HMPREF3107_02930;Name=narH;gbkey=Gene;gene=narH;gene_biotype=pseudogene;locus_tag=HMPREF3107_02930;pseudo=true KV790784.1 Protein Homology CDS 48971 49783 . - 0 ID=cds-HMPREF3107_02930;Parent=gene-HMPREF3107_02930;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;gene=narH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342921.1;locus_tag=HMPREF3107_02930;product=nitrate reductase subunit beta;pseudo=true;transl_table=11 ##sequence-region KV790785.1 1 22518 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790785.1 Genbank region 1 22518 . + . ID=KV790785.1:1..22518;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790785.1 Genbank gene 148 1470 . + . ID=gene-HMPREF3107_02935;Name=HMPREF3107_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02935 KV790785.1 Protein Homology CDS 148 1470 . + 0 ID=cds-OFT02776.1;Parent=gene-HMPREF3107_02935;Dbxref=NCBI_GP:OFT02776.1;Name=OFT02776.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217970.1;locus_tag=HMPREF3107_02935;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=OFT02776.1;transl_table=11 KV790785.1 Genbank gene 1722 2336 . + . ID=gene-HMPREF3107_02940;Name=HMPREF3107_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02940 KV790785.1 Protein Homology CDS 1722 2336 . + 0 ID=cds-OFT02777.1;Parent=gene-HMPREF3107_02940;Dbxref=NCBI_GP:OFT02777.1;Name=OFT02777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772603.1;locus_tag=HMPREF3107_02940;product=hemolysin;protein_id=OFT02777.1;transl_table=11 KV790785.1 Genbank gene 2482 3075 . + . ID=gene-HMPREF3107_02945;Name=HMPREF3107_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02945 KV790785.1 Protein Homology CDS 2482 3075 . + 0 ID=cds-OFT02778.1;Parent=gene-HMPREF3107_02945;Dbxref=NCBI_GP:OFT02778.1;Name=OFT02778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426608.1;locus_tag=HMPREF3107_02945;product=hypothetical protein;protein_id=OFT02778.1;transl_table=11 KV790785.1 Genbank gene 3216 4709 . + . ID=gene-HMPREF3107_02950;Name=HMPREF3107_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02950 KV790785.1 Protein Homology CDS 3216 4709 . + 0 ID=cds-OFT02779.1;Parent=gene-HMPREF3107_02950;Dbxref=NCBI_GP:OFT02779.1;Name=OFT02779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282903.1;locus_tag=HMPREF3107_02950;product=protease Do;protein_id=OFT02779.1;transl_table=11 KV790785.1 Genbank gene 4775 5860 . + . ID=gene-HMPREF3107_02955;Name=HMPREF3107_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02955 KV790785.1 Protein Homology CDS 4775 5860 . + 0 ID=cds-OFT02780.1;Parent=gene-HMPREF3107_02955;Dbxref=NCBI_GP:OFT02780.1;Name=OFT02780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282906.1;locus_tag=HMPREF3107_02955;product=beta-N-acetylhexosaminidase;protein_id=OFT02780.1;transl_table=11 KV790785.1 Genbank gene 6006 7409 . - . ID=gene-HMPREF3107_02960;Name=HMPREF3107_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02960 KV790785.1 GeneMarkS+ CDS 6006 7409 . - 0 ID=cds-OFT02781.1;Parent=gene-HMPREF3107_02960;Dbxref=NCBI_GP:OFT02781.1;Name=OFT02781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02960;product=hypothetical protein;protein_id=OFT02781.1;transl_table=11 KV790785.1 Genbank gene 7657 8349 . - . ID=gene-HMPREF3107_02965;Name=HMPREF3107_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02965 KV790785.1 Protein Homology CDS 7657 8349 . - 0 ID=cds-OFT02782.1;Parent=gene-HMPREF3107_02965;Dbxref=NCBI_GP:OFT02782.1;Name=OFT02782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772621.1;locus_tag=HMPREF3107_02965;product=hypothetical protein;protein_id=OFT02782.1;transl_table=11 KV790785.1 Genbank gene 8534 8776 . - . ID=gene-HMPREF3107_02970;Name=HMPREF3107_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02970 KV790785.1 Protein Homology CDS 8534 8776 . - 0 ID=cds-OFT02783.1;Parent=gene-HMPREF3107_02970;Dbxref=NCBI_GP:OFT02783.1;Name=OFT02783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427599.1;locus_tag=HMPREF3107_02970;product=transglycosylase;protein_id=OFT02783.1;transl_table=11 KV790785.1 Genbank gene 8934 10580 . - . ID=gene-HMPREF3107_02975;Name=HMPREF3107_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02975 KV790785.1 Protein Homology CDS 8934 10580 . - 0 ID=cds-OFT02792.1;Parent=gene-HMPREF3107_02975;Dbxref=NCBI_GP:OFT02792.1;Name=OFT02792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313064.1;locus_tag=HMPREF3107_02975;product=ubiquinone biosynthesis protein;protein_id=OFT02792.1;transl_table=11 KV790785.1 Genbank gene 10732 11880 . + . ID=gene-HMPREF3107_02980;Name=HMPREF3107_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02980 KV790785.1 Protein Homology CDS 10732 11880 . + 0 ID=cds-OFT02784.1;Parent=gene-HMPREF3107_02980;Dbxref=NCBI_GP:OFT02784.1;Name=OFT02784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343913.1;locus_tag=HMPREF3107_02980;product=hypothetical protein;protein_id=OFT02784.1;transl_table=11 KV790785.1 Genbank gene 11907 12122 . + . ID=gene-HMPREF3107_02985;Name=HMPREF3107_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02985 KV790785.1 Protein Homology CDS 11907 12122 . + 0 ID=cds-OFT02785.1;Parent=gene-HMPREF3107_02985;Dbxref=NCBI_GP:OFT02785.1;Name=OFT02785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772629.1;locus_tag=HMPREF3107_02985;product=hypothetical protein;protein_id=OFT02785.1;transl_table=11 KV790785.1 Genbank gene 12226 12966 . + . ID=gene-HMPREF3107_02990;Name=HMPREF3107_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02990 KV790785.1 Protein Homology CDS 12226 12966 . + 0 ID=cds-OFT02786.1;Parent=gene-HMPREF3107_02990;Dbxref=NCBI_GP:OFT02786.1;Name=OFT02786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518939.1;locus_tag=HMPREF3107_02990;product=hypothetical protein;protein_id=OFT02786.1;transl_table=11 KV790785.1 Genbank gene 12948 13712 . + . ID=gene-HMPREF3107_02995;Name=HMPREF3107_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_02995 KV790785.1 GeneMarkS+ CDS 12948 13712 . + 0 ID=cds-OFT02787.1;Parent=gene-HMPREF3107_02995;Dbxref=NCBI_GP:OFT02787.1;Name=OFT02787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_02995;product=hypothetical protein;protein_id=OFT02787.1;transl_table=11 KV790785.1 Genbank gene 13840 15363 . + . ID=gene-HMPREF3107_03000;Name=HMPREF3107_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03000 KV790785.1 Protein Homology CDS 13840 15363 . + 0 ID=cds-OFT02793.1;Parent=gene-HMPREF3107_03000;Dbxref=NCBI_GP:OFT02793.1;Name=OFT02793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784320.1;locus_tag=HMPREF3107_03000;product=MFS transporter;protein_id=OFT02793.1;transl_table=11 KV790785.1 Genbank gene 15386 16195 . + . ID=gene-HMPREF3107_03005;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=HMPREF3107_03005 KV790785.1 Protein Homology CDS 15386 16195 . + 0 ID=cds-OFT02788.1;Parent=gene-HMPREF3107_03005;Dbxref=NCBI_GP:OFT02788.1;Name=OFT02788.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772637.1;locus_tag=HMPREF3107_03005;product=shikimate dehydrogenase;protein_id=OFT02788.1;transl_table=11 KV790785.1 Genbank gene 16198 16881 . + . ID=gene-HMPREF3107_03010;Name=HMPREF3107_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03010 KV790785.1 Protein Homology CDS 16198 16881 . + 0 ID=cds-OFT02789.1;Parent=gene-HMPREF3107_03010;Dbxref=NCBI_GP:OFT02789.1;Name=OFT02789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343652.1;locus_tag=HMPREF3107_03010;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=OFT02789.1;transl_table=11 KV790785.1 Genbank gene 17079 17693 . + . ID=gene-HMPREF3107_03015;Name=HMPREF3107_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03015 KV790785.1 Protein Homology CDS 17079 17693 . + 0 ID=cds-OFT02794.1;Parent=gene-HMPREF3107_03015;Dbxref=NCBI_GP:OFT02794.1;Name=OFT02794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772642.1;locus_tag=HMPREF3107_03015;product=diadenosine tetraphosphatase;protein_id=OFT02794.1;transl_table=11 KV790785.1 Genbank gene 17907 18782 . - . ID=gene-HMPREF3107_03020;Name=HMPREF3107_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03020 KV790785.1 Protein Homology CDS 17907 18782 . - 0 ID=cds-OFT02790.1;Parent=gene-HMPREF3107_03020;Dbxref=NCBI_GP:OFT02790.1;Name=OFT02790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772644.1;locus_tag=HMPREF3107_03020;product=fatty acid-binding protein DegV;protein_id=OFT02790.1;transl_table=11 KV790785.1 Genbank gene 18914 19411 . - . ID=gene-HMPREF3107_03025;Name=HMPREF3107_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03025 KV790785.1 Protein Homology CDS 18914 19411 . - 0 ID=cds-OFT02791.1;Parent=gene-HMPREF3107_03025;Dbxref=NCBI_GP:OFT02791.1;Name=OFT02791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772646.1;locus_tag=HMPREF3107_03025;product=damage-inducible protein CinA;protein_id=OFT02791.1;transl_table=11 KV790785.1 Genbank gene 19714 20217 . - . ID=gene-HMPREF3107_03030;Name=HMPREF3107_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03030 KV790785.1 Protein Homology CDS 19714 20217 . - 0 ID=cds-OFT02770.1;Parent=gene-HMPREF3107_03030;Dbxref=NCBI_GP:OFT02770.1;Name=OFT02770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772648.1;locus_tag=HMPREF3107_03030;product=hypothetical protein;protein_id=OFT02770.1;transl_table=11 KV790785.1 Genbank gene 20384 21151 . + . ID=gene-HMPREF3107_03035;Name=HMPREF3107_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03035 KV790785.1 Protein Homology CDS 20384 21151 . + 0 ID=cds-OFT02772.1;Parent=gene-HMPREF3107_03035;Dbxref=NCBI_GP:OFT02772.1;Name=OFT02772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216273.1;locus_tag=HMPREF3107_03035;product=chromosome partitioning protein;protein_id=OFT02772.1;transl_table=11 KV790785.1 Genbank gene 21289 22443 . + . ID=gene-HMPREF3107_03040;Name=HMPREF3107_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03040 KV790785.1 Protein Homology CDS 21289 22443 . + 0 ID=cds-OFT02771.1;Parent=gene-HMPREF3107_03040;Dbxref=NCBI_GP:OFT02771.1;Name=OFT02771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772655.1;locus_tag=HMPREF3107_03040;product=lipid-A-disaccharide synthase;protein_id=OFT02771.1;transl_table=11 ##sequence-region KV790786.1 1 127497 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790786.1 Genbank region 1 127497 . + . ID=KV790786.1:1..127497;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790786.1 Genbank gene 126 722 . - . ID=gene-HMPREF3107_03045;Name=HMPREF3107_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03045 KV790786.1 Protein Homology CDS 126 722 . - 0 ID=cds-OFT02656.1;Parent=gene-HMPREF3107_03045;Dbxref=NCBI_GP:OFT02656.1;Name=OFT02656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824483.1;locus_tag=HMPREF3107_03045;product=hypothetical protein;protein_id=OFT02656.1;transl_table=11 KV790786.1 Genbank gene 949 1395 . - . ID=gene-HMPREF3107_03050;Name=HMPREF3107_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03050 KV790786.1 Protein Homology CDS 949 1395 . - 0 ID=cds-OFT02657.1;Parent=gene-HMPREF3107_03050;Dbxref=NCBI_GP:OFT02657.1;Name=OFT02657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823658.1;locus_tag=HMPREF3107_03050;product=4-hydroxybenzoyl-CoA thioesterase;protein_id=OFT02657.1;transl_table=11 KV790786.1 Genbank gene 1388 2344 . - . ID=gene-HMPREF3107_03055;Name=HMPREF3107_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03055 KV790786.1 Protein Homology CDS 1388 2344 . - 0 ID=cds-OFT02753.1;Parent=gene-HMPREF3107_03055;Dbxref=NCBI_GP:OFT02753.1;Name=OFT02753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003790509.1;locus_tag=HMPREF3107_03055;product=glycosyl transferase family 2;protein_id=OFT02753.1;transl_table=11 KV790786.1 Genbank gene 3161 3709 . - . ID=gene-HMPREF3107_03060;Name=HMPREF3107_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03060 KV790786.1 Protein Homology CDS 3161 3709 . - 0 ID=cds-OFT02658.1;Parent=gene-HMPREF3107_03060;Dbxref=NCBI_GP:OFT02658.1;Name=OFT02658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824587.1;locus_tag=HMPREF3107_03060;product=hypothetical protein;protein_id=OFT02658.1;transl_table=11 KV790786.1 Genbank gene 3833 4474 . + . ID=gene-HMPREF3107_03065;Name=HMPREF3107_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03065 KV790786.1 Protein Homology CDS 3833 4474 . + 0 ID=cds-OFT02659.1;Parent=gene-HMPREF3107_03065;Dbxref=NCBI_GP:OFT02659.1;Name=OFT02659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770994.1;locus_tag=HMPREF3107_03065;product=4'-phosphopantetheinyl transferase;protein_id=OFT02659.1;transl_table=11 KV790786.1 Genbank gene 4471 5043 . - . ID=gene-HMPREF3107_03070;Name=HMPREF3107_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03070 KV790786.1 Protein Homology CDS 4471 5043 . - 0 ID=cds-OFT02660.1;Parent=gene-HMPREF3107_03070;Dbxref=NCBI_GP:OFT02660.1;Name=OFT02660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770996.1;locus_tag=HMPREF3107_03070;product=hypothetical protein;protein_id=OFT02660.1;transl_table=11 KV790786.1 Genbank gene 5040 5300 . - . ID=gene-HMPREF3107_03075;Name=HMPREF3107_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03075 KV790786.1 Protein Homology CDS 5040 5300 . - 0 ID=cds-OFT02661.1;Parent=gene-HMPREF3107_03075;Dbxref=NCBI_GP:OFT02661.1;Name=OFT02661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770998.1;locus_tag=HMPREF3107_03075;product=acyl carrier protein;protein_id=OFT02661.1;transl_table=11 KV790786.1 Genbank gene 5471 5731 . - . ID=gene-HMPREF3107_03080;Name=HMPREF3107_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03080 KV790786.1 Protein Homology CDS 5471 5731 . - 0 ID=cds-OFT02754.1;Parent=gene-HMPREF3107_03080;Dbxref=NCBI_GP:OFT02754.1;Name=OFT02754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750043.1;locus_tag=HMPREF3107_03080;product=acyl carrier protein;protein_id=OFT02754.1;transl_table=11 KV790786.1 Genbank gene 5724 6506 . - . ID=gene-HMPREF3107_03085;Name=HMPREF3107_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03085 KV790786.1 Protein Homology CDS 5724 6506 . - 0 ID=cds-OFT02662.1;Parent=gene-HMPREF3107_03085;Dbxref=NCBI_GP:OFT02662.1;Name=OFT02662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771004.1;locus_tag=HMPREF3107_03085;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFT02662.1;transl_table=11 KV790786.1 Genbank gene 6485 7228 . - . ID=gene-HMPREF3107_03090;Name=HMPREF3107_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03090 KV790786.1 Protein Homology CDS 6485 7228 . - 0 ID=cds-OFT02755.1;Parent=gene-HMPREF3107_03090;Dbxref=NCBI_GP:OFT02755.1;Name=OFT02755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771005.1;locus_tag=HMPREF3107_03090;product=3-oxoacyl-ACP synthase;protein_id=OFT02755.1;transl_table=11 KV790786.1 Genbank gene 7499 8968 . - . ID=gene-HMPREF3107_03095;Name=HMPREF3107_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03095 KV790786.1 Protein Homology CDS 7499 8968 . - 0 ID=cds-OFT02663.1;Parent=gene-HMPREF3107_03095;Dbxref=NCBI_GP:OFT02663.1;Name=OFT02663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425616.1;locus_tag=HMPREF3107_03095;product=hypothetical protein;protein_id=OFT02663.1;transl_table=11 KV790786.1 Genbank gene 9219 9827 . - . ID=gene-HMPREF3107_03100;Name=HMPREF3107_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03100 KV790786.1 Protein Homology CDS 9219 9827 . - 0 ID=cds-OFT02664.1;Parent=gene-HMPREF3107_03100;Dbxref=NCBI_GP:OFT02664.1;Name=OFT02664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771011.1;locus_tag=HMPREF3107_03100;product=NAD(P)H-quinone oxidoreductase;protein_id=OFT02664.1;transl_table=11 KV790786.1 Genbank gene 9943 11208 . + . ID=gene-HMPREF3107_03105;Name=HMPREF3107_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03105 KV790786.1 Protein Homology CDS 9943 11208 . + 0 ID=cds-OFT02665.1;Parent=gene-HMPREF3107_03105;Dbxref=NCBI_GP:OFT02665.1;Name=OFT02665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771013.1;locus_tag=HMPREF3107_03105;product=hypothetical protein;protein_id=OFT02665.1;transl_table=11 KV790786.1 Genbank gene 11324 11818 . + . ID=gene-HMPREF3107_03110;Name=HMPREF3107_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03110 KV790786.1 Protein Homology CDS 11324 11818 . + 0 ID=cds-OFT02666.1;Parent=gene-HMPREF3107_03110;Dbxref=NCBI_GP:OFT02666.1;Name=OFT02666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771017.1;locus_tag=HMPREF3107_03110;product=MarR family transcriptional regulator;protein_id=OFT02666.1;transl_table=11 KV790786.1 Genbank gene 11940 12812 . + . ID=gene-HMPREF3107_03115;Name=HMPREF3107_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03115 KV790786.1 Protein Homology CDS 11940 12812 . + 0 ID=cds-OFT02667.1;Parent=gene-HMPREF3107_03115;Dbxref=NCBI_GP:OFT02667.1;Name=OFT02667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173903.1;locus_tag=HMPREF3107_03115;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=OFT02667.1;transl_table=11 KV790786.1 Genbank gene 12967 14814 . + . ID=gene-HMPREF3107_03120;Name=HMPREF3107_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03120 KV790786.1 Protein Homology CDS 12967 14814 . + 0 ID=cds-OFT02668.1;Parent=gene-HMPREF3107_03120;Dbxref=NCBI_GP:OFT02668.1;Name=OFT02668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756602.1;locus_tag=HMPREF3107_03120;product=lipid A export permease/ATP-binding protein MsbA;protein_id=OFT02668.1;transl_table=11 KV790786.1 Genbank gene 14918 16981 . + . ID=gene-HMPREF3107_03125;Name=HMPREF3107_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03125 KV790786.1 Protein Homology CDS 14918 16981 . + 0 ID=cds-OFT02756.1;Parent=gene-HMPREF3107_03125;Dbxref=NCBI_GP:OFT02756.1;Name=OFT02756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240026.1;locus_tag=HMPREF3107_03125;product=glycine--tRNA ligase subunit beta;protein_id=OFT02756.1;transl_table=11 KV790786.1 Genbank pseudogene 17036 17812 . + . ID=gene-HMPREF3107_03130;Name=HMPREF3107_03130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_03130;pseudo=true KV790786.1 Protein Homology CDS 17036 17812 . + 0 ID=cds-HMPREF3107_03130;Parent=gene-HMPREF3107_03130;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015667800.1;locus_tag=HMPREF3107_03130;product=FkbM family methyltransferase;pseudo=true;transl_table=11 KV790786.1 Genbank gene 18048 19112 . + . ID=gene-HMPREF3107_03135;Name=HMPREF3107_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03135 KV790786.1 GeneMarkS+ CDS 18048 19112 . + 0 ID=cds-OFT02669.1;Parent=gene-HMPREF3107_03135;Dbxref=NCBI_GP:OFT02669.1;Name=OFT02669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03135;product=hypothetical protein;protein_id=OFT02669.1;transl_table=11 KV790786.1 Genbank gene 19135 20394 . + . ID=gene-HMPREF3107_03140;Name=HMPREF3107_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03140 KV790786.1 GeneMarkS+ CDS 19135 20394 . + 0 ID=cds-OFT02670.1;Parent=gene-HMPREF3107_03140;Dbxref=NCBI_GP:OFT02670.1;Name=OFT02670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03140;product=hypothetical protein;protein_id=OFT02670.1;transl_table=11 KV790786.1 Genbank gene 20408 21535 . + . ID=gene-HMPREF3107_03145;Name=HMPREF3107_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03145 KV790786.1 GeneMarkS+ CDS 20408 21535 . + 0 ID=cds-OFT02671.1;Parent=gene-HMPREF3107_03145;Dbxref=NCBI_GP:OFT02671.1;Name=OFT02671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03145;product=hypothetical protein;protein_id=OFT02671.1;transl_table=11 KV790786.1 Genbank gene 21535 22599 . + . ID=gene-HMPREF3107_03150;Name=HMPREF3107_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03150 KV790786.1 Protein Homology CDS 21535 22599 . + 0 ID=cds-OFT02672.1;Parent=gene-HMPREF3107_03150;Dbxref=NCBI_GP:OFT02672.1;Name=OFT02672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771036.1;locus_tag=HMPREF3107_03150;product=dTDP-glucose 4%2C6-dehydratase;protein_id=OFT02672.1;transl_table=11 KV790786.1 Genbank gene 22728 23594 . + . ID=gene-HMPREF3107_03155;Name=HMPREF3107_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03155 KV790786.1 Protein Homology CDS 22728 23594 . + 0 ID=cds-OFT02673.1;Parent=gene-HMPREF3107_03155;Dbxref=NCBI_GP:OFT02673.1;Name=OFT02673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231451.1;locus_tag=HMPREF3107_03155;product=glucose-1-phosphate thymidylyltransferase;protein_id=OFT02673.1;transl_table=11 KV790786.1 Genbank gene 23649 24191 . + . ID=gene-HMPREF3107_03160;Name=HMPREF3107_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03160 KV790786.1 Protein Homology CDS 23649 24191 . + 0 ID=cds-OFT02757.1;Parent=gene-HMPREF3107_03160;Dbxref=NCBI_GP:OFT02757.1;Name=OFT02757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686570.1;locus_tag=HMPREF3107_03160;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=OFT02757.1;transl_table=11 KV790786.1 Genbank gene 24387 25436 . + . ID=gene-HMPREF3107_03165;Name=HMPREF3107_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03165 KV790786.1 Protein Homology CDS 24387 25436 . + 0 ID=cds-OFT02674.1;Parent=gene-HMPREF3107_03165;Dbxref=NCBI_GP:OFT02674.1;Name=OFT02674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683783.1;locus_tag=HMPREF3107_03165;product=glycosyl transferase family 1;protein_id=OFT02674.1;transl_table=11 KV790786.1 Genbank gene 25493 26926 . - . ID=gene-HMPREF3107_03170;Name=HMPREF3107_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03170 KV790786.1 GeneMarkS+ CDS 25493 26926 . - 0 ID=cds-OFT02675.1;Parent=gene-HMPREF3107_03170;Dbxref=NCBI_GP:OFT02675.1;Name=OFT02675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03170;product=hypothetical protein;protein_id=OFT02675.1;transl_table=11 KV790786.1 Genbank gene 27088 29559 . - . ID=gene-HMPREF3107_03175;Name=HMPREF3107_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03175 KV790786.1 Protein Homology CDS 27088 29559 . - 0 ID=cds-OFT02676.1;Parent=gene-HMPREF3107_03175;Dbxref=NCBI_GP:OFT02676.1;Name=OFT02676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763940.1;locus_tag=HMPREF3107_03175;product=DNA ligase (NAD(+)) LigA;protein_id=OFT02676.1;transl_table=11 KV790786.1 Genbank gene 29651 31120 . - . ID=gene-HMPREF3107_03180;Name=HMPREF3107_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03180 KV790786.1 Protein Homology CDS 29651 31120 . - 0 ID=cds-OFT02758.1;Parent=gene-HMPREF3107_03180;Dbxref=NCBI_GP:OFT02758.1;Name=OFT02758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283687.1;locus_tag=HMPREF3107_03180;product=cell division protein ZipA;protein_id=OFT02758.1;transl_table=11 KV790786.1 Genbank gene 31203 31751 . - . ID=gene-HMPREF3107_03185;Name=HMPREF3107_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03185 KV790786.1 Protein Homology CDS 31203 31751 . - 0 ID=cds-OFT02677.1;Parent=gene-HMPREF3107_03185;Dbxref=NCBI_GP:OFT02677.1;Name=OFT02677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771057.1;locus_tag=HMPREF3107_03185;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=OFT02677.1;transl_table=11 KV790786.1 Genbank gene 31841 32152 . - . ID=gene-HMPREF3107_03190;Name=HMPREF3107_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03190 KV790786.1 Protein Homology CDS 31841 32152 . - 0 ID=cds-OFT02759.1;Parent=gene-HMPREF3107_03190;Dbxref=NCBI_GP:OFT02759.1;Name=OFT02759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005602899.1;locus_tag=HMPREF3107_03190;product=hypothetical protein;protein_id=OFT02759.1;transl_table=11 KV790786.1 Genbank gene 32416 33411 . + . ID=gene-HMPREF3107_03195;Name=HMPREF3107_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03195 KV790786.1 Protein Homology CDS 32416 33411 . + 0 ID=cds-OFT02760.1;Parent=gene-HMPREF3107_03195;Dbxref=NCBI_GP:OFT02760.1;Name=OFT02760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771061.1;locus_tag=HMPREF3107_03195;product=aminodeoxychorismate lyase;protein_id=OFT02760.1;transl_table=11 KV790786.1 Genbank gene 33499 34392 . + . ID=gene-HMPREF3107_03200;Name=HMPREF3107_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03200 KV790786.1 Protein Homology CDS 33499 34392 . + 0 ID=cds-OFT02678.1;Parent=gene-HMPREF3107_03200;Dbxref=NCBI_GP:OFT02678.1;Name=OFT02678.1;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771063.1;locus_tag=HMPREF3107_03200;product=acetylglutamate kinase;protein_id=OFT02678.1;transl_table=11 KV790786.1 Genbank gene 34618 35151 . + . ID=gene-HMPREF3107_03205;Name=HMPREF3107_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03205 KV790786.1 Protein Homology CDS 34618 35151 . + 0 ID=cds-OFT02679.1;Parent=gene-HMPREF3107_03205;Dbxref=NCBI_GP:OFT02679.1;Name=OFT02679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448313.1;locus_tag=HMPREF3107_03205;product=serine hydrolase;protein_id=OFT02679.1;transl_table=11 KV790786.1 Genbank gene 35354 35728 . + . ID=gene-HMPREF3107_03210;Name=HMPREF3107_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03210 KV790786.1 Protein Homology CDS 35354 35728 . + 0 ID=cds-OFT02680.1;Parent=gene-HMPREF3107_03210;Dbxref=NCBI_GP:OFT02680.1;Name=OFT02680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771068.1;locus_tag=HMPREF3107_03210;product=hypothetical protein;protein_id=OFT02680.1;transl_table=11 KV790786.1 Genbank gene 35901 36953 . + . ID=gene-HMPREF3107_03215;Name=HMPREF3107_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03215 KV790786.1 Protein Homology CDS 35901 36953 . + 0 ID=cds-OFT02681.1;Parent=gene-HMPREF3107_03215;Dbxref=NCBI_GP:OFT02681.1;Name=OFT02681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582003.1;locus_tag=HMPREF3107_03215;product=biotin synthase BioB;protein_id=OFT02681.1;transl_table=11 KV790786.1 Genbank gene 37234 39027 . + . ID=gene-HMPREF3107_03220;Name=HMPREF3107_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03220 KV790786.1 Protein Homology CDS 37234 39027 . + 0 ID=cds-OFT02682.1;Parent=gene-HMPREF3107_03220;Dbxref=NCBI_GP:OFT02682.1;Name=OFT02682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519891.1;locus_tag=HMPREF3107_03220;product=protein-disulfide reductase DsbD;protein_id=OFT02682.1;transl_table=11 KV790786.1 Genbank gene 39451 40176 . - . ID=gene-HMPREF3107_03225;Name=HMPREF3107_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03225 KV790786.1 Protein Homology CDS 39451 40176 . - 0 ID=cds-OFT02683.1;Parent=gene-HMPREF3107_03225;Dbxref=NCBI_GP:OFT02683.1;Name=OFT02683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771079.1;locus_tag=HMPREF3107_03225;product=hypothetical protein;protein_id=OFT02683.1;transl_table=11 KV790786.1 Genbank gene 40311 41213 . + . ID=gene-HMPREF3107_03230;Name=HMPREF3107_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03230 KV790786.1 Protein Homology CDS 40311 41213 . + 0 ID=cds-OFT02684.1;Parent=gene-HMPREF3107_03230;Dbxref=NCBI_GP:OFT02684.1;Name=OFT02684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P67029.1;locus_tag=HMPREF3107_03230;product=glycine--tRNA ligase subunit alpha;protein_id=OFT02684.1;transl_table=11 KV790786.1 Genbank gene 41225 42028 . + . ID=gene-HMPREF3107_03235;Name=HMPREF3107_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03235 KV790786.1 Protein Homology CDS 41225 42028 . + 0 ID=cds-OFT02685.1;Parent=gene-HMPREF3107_03235;Dbxref=NCBI_GP:OFT02685.1;Name=OFT02685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771081.1;locus_tag=HMPREF3107_03235;product=hypothetical protein;protein_id=OFT02685.1;transl_table=11 KV790786.1 Genbank gene 42118 42852 . - . ID=gene-HMPREF3107_03240;Name=HMPREF3107_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03240 KV790786.1 Protein Homology CDS 42118 42852 . - 0 ID=cds-OFT02686.1;Parent=gene-HMPREF3107_03240;Dbxref=NCBI_GP:OFT02686.1;Name=OFT02686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771083.1;locus_tag=HMPREF3107_03240;product=hypothetical protein;protein_id=OFT02686.1;transl_table=11 KV790786.1 Genbank gene 42861 43736 . - . ID=gene-HMPREF3107_03245;Name=HMPREF3107_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03245 KV790786.1 Protein Homology CDS 42861 43736 . - 0 ID=cds-OFT02687.1;Parent=gene-HMPREF3107_03245;Dbxref=NCBI_GP:OFT02687.1;Name=OFT02687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771084.1;locus_tag=HMPREF3107_03245;product=hypothetical protein;protein_id=OFT02687.1;transl_table=11 KV790786.1 Genbank gene 43749 44030 . - . ID=gene-HMPREF3107_03250;Name=HMPREF3107_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03250 KV790786.1 Protein Homology CDS 43749 44030 . - 0 ID=cds-OFT02688.1;Parent=gene-HMPREF3107_03250;Dbxref=NCBI_GP:OFT02688.1;Name=OFT02688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771086.1;locus_tag=HMPREF3107_03250;product=BolA family transcriptional regulator;protein_id=OFT02688.1;transl_table=11 KV790786.1 Genbank gene 44027 44323 . - . ID=gene-HMPREF3107_03255;Name=HMPREF3107_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03255 KV790786.1 Protein Homology CDS 44027 44323 . - 0 ID=cds-OFT02689.1;Parent=gene-HMPREF3107_03255;Dbxref=NCBI_GP:OFT02689.1;Name=OFT02689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343639.1;locus_tag=HMPREF3107_03255;product=hypothetical protein;protein_id=OFT02689.1;transl_table=11 KV790786.1 Genbank gene 44316 44867 . - . ID=gene-HMPREF3107_03260;Name=HMPREF3107_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03260 KV790786.1 Protein Homology CDS 44316 44867 . - 0 ID=cds-OFT02690.1;Parent=gene-HMPREF3107_03260;Dbxref=NCBI_GP:OFT02690.1;Name=OFT02690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343638.1;locus_tag=HMPREF3107_03260;product=septation protein A;protein_id=OFT02690.1;transl_table=11 KV790786.1 Genbank gene 45444 47936 . + . ID=gene-HMPREF3107_03265;Name=HMPREF3107_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03265 KV790786.1 GeneMarkS+ CDS 45444 47936 . + 0 ID=cds-OFT02691.1;Parent=gene-HMPREF3107_03265;Dbxref=NCBI_GP:OFT02691.1;Name=OFT02691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03265;product=hypothetical protein;protein_id=OFT02691.1;transl_table=11 KV790786.1 Genbank gene 48078 48926 . + . ID=gene-HMPREF3107_03270;Name=HMPREF3107_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03270 KV790786.1 Protein Homology CDS 48078 48926 . + 0 ID=cds-OFT02692.1;Parent=gene-HMPREF3107_03270;Dbxref=NCBI_GP:OFT02692.1;Name=OFT02692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742789.1;locus_tag=HMPREF3107_03270;product=tRNA pseudouridine(38%2C39%2C40) synthase TruA;protein_id=OFT02692.1;transl_table=11 KV790786.1 Genbank gene 48926 49300 . + . ID=gene-HMPREF3107_03275;Name=HMPREF3107_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03275 KV790786.1 GeneMarkS+ CDS 48926 49300 . + 0 ID=cds-OFT02693.1;Parent=gene-HMPREF3107_03275;Dbxref=NCBI_GP:OFT02693.1;Name=OFT02693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03275;product=hypothetical protein;protein_id=OFT02693.1;transl_table=11 KV790786.1 Genbank gene 49433 50053 . + . ID=gene-HMPREF3107_03280;Name=HMPREF3107_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03280 KV790786.1 Protein Homology CDS 49433 50053 . + 0 ID=cds-OFT02694.1;Parent=gene-HMPREF3107_03280;Dbxref=NCBI_GP:OFT02694.1;Name=OFT02694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685122.1;locus_tag=HMPREF3107_03280;product=N-(5'-phosphoribosyl)anthranilate isomerase;protein_id=OFT02694.1;transl_table=11 KV790786.1 Genbank gene 50076 50999 . + . ID=gene-HMPREF3107_03285;Name=HMPREF3107_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03285 KV790786.1 GeneMarkS+ CDS 50076 50999 . + 0 ID=cds-OFT02695.1;Parent=gene-HMPREF3107_03285;Dbxref=NCBI_GP:OFT02695.1;Name=OFT02695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03285;product=hypothetical protein;protein_id=OFT02695.1;transl_table=11 KV790786.1 Genbank gene 51030 51920 . + . ID=gene-HMPREF3107_03290;Name=HMPREF3107_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03290 KV790786.1 GeneMarkS+ CDS 51030 51920 . + 0 ID=cds-OFT02696.1;Parent=gene-HMPREF3107_03290;Dbxref=NCBI_GP:OFT02696.1;Name=OFT02696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03290;product=hypothetical protein;protein_id=OFT02696.1;transl_table=11 KV790786.1 Genbank gene 52075 52665 . + . ID=gene-HMPREF3107_03295;Name=HMPREF3107_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03295 KV790786.1 Protein Homology CDS 52075 52665 . + 0 ID=cds-OFT02697.1;Parent=gene-HMPREF3107_03295;Dbxref=NCBI_GP:OFT02697.1;Name=OFT02697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771108.1;locus_tag=HMPREF3107_03295;product=DNA glycosylase;protein_id=OFT02697.1;transl_table=11 KV790786.1 Genbank gene 52765 53949 . + . ID=gene-HMPREF3107_03300;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=HMPREF3107_03300 KV790786.1 Protein Homology CDS 52765 53949 . + 0 ID=cds-OFT02698.1;Parent=gene-HMPREF3107_03300;Dbxref=NCBI_GP:OFT02698.1;Name=OFT02698.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771110.1;locus_tag=HMPREF3107_03300;product=acetylornithine aminotransferase;protein_id=OFT02698.1;transl_table=11 KV790786.1 Genbank gene 53980 54309 . + . ID=gene-HMPREF3107_03305;Name=HMPREF3107_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03305 KV790786.1 GeneMarkS+ CDS 53980 54309 . + 0 ID=cds-OFT02699.1;Parent=gene-HMPREF3107_03305;Dbxref=NCBI_GP:OFT02699.1;Name=OFT02699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03305;product=hypothetical protein;protein_id=OFT02699.1;transl_table=11 KV790786.1 Genbank gene 54458 55036 . + . ID=gene-HMPREF3107_03310;Name=HMPREF3107_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03310 KV790786.1 Protein Homology CDS 54458 55036 . + 0 ID=cds-OFT02761.1;Parent=gene-HMPREF3107_03310;Dbxref=NCBI_GP:OFT02761.1;Name=OFT02761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004878717.1;locus_tag=HMPREF3107_03310;product=hypothetical protein;protein_id=OFT02761.1;transl_table=11 KV790786.1 Genbank gene 55114 55719 . + . ID=gene-HMPREF3107_03315;Name=HMPREF3107_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03315 KV790786.1 Protein Homology CDS 55114 55719 . + 0 ID=cds-OFT02700.1;Parent=gene-HMPREF3107_03315;Dbxref=NCBI_GP:OFT02700.1;Name=OFT02700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823329.1;locus_tag=HMPREF3107_03315;product=hypothetical protein;protein_id=OFT02700.1;transl_table=11 KV790786.1 Genbank gene 55885 56685 . + . ID=gene-HMPREF3107_03320;Name=HMPREF3107_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03320 KV790786.1 Protein Homology CDS 55885 56685 . + 0 ID=cds-OFT02701.1;Parent=gene-HMPREF3107_03320;Dbxref=NCBI_GP:OFT02701.1;Name=OFT02701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771117.1;locus_tag=HMPREF3107_03320;product=HAD family hydrolase;protein_id=OFT02701.1;transl_table=11 KV790786.1 Genbank gene 56788 57405 . + . ID=gene-HMPREF3107_03325;Name=HMPREF3107_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03325 KV790786.1 Protein Homology CDS 56788 57405 . + 0 ID=cds-OFT02702.1;Parent=gene-HMPREF3107_03325;Dbxref=NCBI_GP:OFT02702.1;Name=OFT02702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003796650.1;locus_tag=HMPREF3107_03325;product=glucan synthase;protein_id=OFT02702.1;transl_table=11 KV790786.1 Genbank gene 57452 57823 . - . ID=gene-HMPREF3107_03330;Name=HMPREF3107_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03330 KV790786.1 Protein Homology CDS 57452 57823 . - 0 ID=cds-OFT02703.1;Parent=gene-HMPREF3107_03330;Dbxref=NCBI_GP:OFT02703.1;Name=OFT02703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742446.1;locus_tag=HMPREF3107_03330;product=hypothetical protein;protein_id=OFT02703.1;transl_table=11 KV790786.1 Genbank gene 57820 58026 . - . ID=gene-HMPREF3107_03335;Name=HMPREF3107_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03335 KV790786.1 Protein Homology CDS 57820 58026 . - 0 ID=cds-OFT02704.1;Parent=gene-HMPREF3107_03335;Dbxref=NCBI_GP:OFT02704.1;Name=OFT02704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002243416.1;locus_tag=HMPREF3107_03335;product=dioxygenase;protein_id=OFT02704.1;transl_table=11 KV790786.1 Genbank gene 58055 59551 . - . ID=gene-HMPREF3107_03340;Name=HMPREF3107_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03340 KV790786.1 Protein Homology CDS 58055 59551 . - 0 ID=cds-OFT02705.1;Parent=gene-HMPREF3107_03340;Dbxref=NCBI_GP:OFT02705.1;Name=OFT02705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682499.1;locus_tag=HMPREF3107_03340;product=6-aminohexanoate hydrolase;protein_id=OFT02705.1;transl_table=11 KV790786.1 Genbank gene 59793 60191 . - . ID=gene-HMPREF3107_03345;Name=HMPREF3107_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03345 KV790786.1 Protein Homology CDS 59793 60191 . - 0 ID=cds-OFT02706.1;Parent=gene-HMPREF3107_03345;Dbxref=NCBI_GP:OFT02706.1;Name=OFT02706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771127.1;locus_tag=HMPREF3107_03345;product=hypothetical protein;protein_id=OFT02706.1;transl_table=11 KV790786.1 Genbank gene 60181 60957 . - . ID=gene-HMPREF3107_03350;Name=HMPREF3107_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03350 KV790786.1 Protein Homology CDS 60181 60957 . - 0 ID=cds-OFT02762.1;Parent=gene-HMPREF3107_03350;Dbxref=NCBI_GP:OFT02762.1;Name=OFT02762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286175.1;locus_tag=HMPREF3107_03350;product=exodeoxyribonuclease III;protein_id=OFT02762.1;transl_table=11 KV790786.1 Genbank gene 61079 61483 . - . ID=gene-HMPREF3107_03355;Name=HMPREF3107_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03355 KV790786.1 Protein Homology CDS 61079 61483 . - 0 ID=cds-OFT02763.1;Parent=gene-HMPREF3107_03355;Dbxref=NCBI_GP:OFT02763.1;Name=OFT02763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270821.1;locus_tag=HMPREF3107_03355;product=transcriptional regulator;protein_id=OFT02763.1;transl_table=11 KV790786.1 Genbank gene 62088 62486 . + . ID=gene-HMPREF3107_03360;Name=HMPREF3107_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03360 KV790786.1 GeneMarkS+ CDS 62088 62486 . + 0 ID=cds-OFT02707.1;Parent=gene-HMPREF3107_03360;Dbxref=NCBI_GP:OFT02707.1;Name=OFT02707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03360;product=hypothetical protein;protein_id=OFT02707.1;transl_table=11 KV790786.1 Genbank gene 62661 63302 . + . ID=gene-HMPREF3107_03365;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF3107_03365 KV790786.1 Protein Homology CDS 62661 63302 . + 0 ID=cds-OFT02708.1;Parent=gene-HMPREF3107_03365;Dbxref=NCBI_GP:OFT02708.1;Name=OFT02708.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759231.1;locus_tag=HMPREF3107_03365;product=orotate phosphoribosyltransferase;protein_id=OFT02708.1;transl_table=11 KV790786.1 Genbank gene 63380 63844 . + . ID=gene-HMPREF3107_03370;Name=HMPREF3107_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03370 KV790786.1 Protein Homology CDS 63380 63844 . + 0 ID=cds-OFT02709.1;Parent=gene-HMPREF3107_03370;Dbxref=NCBI_GP:OFT02709.1;Name=OFT02709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751815.1;locus_tag=HMPREF3107_03370;product=hypothetical protein;protein_id=OFT02709.1;transl_table=11 KV790786.1 Genbank gene 63864 65186 . + . ID=gene-HMPREF3107_03375;Name=HMPREF3107_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03375 KV790786.1 Protein Homology CDS 63864 65186 . + 0 ID=cds-OFT02710.1;Parent=gene-HMPREF3107_03375;Dbxref=NCBI_GP:OFT02710.1;Name=OFT02710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283993.1;locus_tag=HMPREF3107_03375;product=amino-acid N-acetyltransferase;protein_id=OFT02710.1;transl_table=11 KV790786.1 Genbank gene 65271 66569 . - . ID=gene-HMPREF3107_03380;Name=HMPREF3107_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03380 KV790786.1 Protein Homology CDS 65271 66569 . - 0 ID=cds-OFT02711.1;Parent=gene-HMPREF3107_03380;Dbxref=NCBI_GP:OFT02711.1;Name=OFT02711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427090.1;locus_tag=HMPREF3107_03380;product=transcriptional regulator;protein_id=OFT02711.1;transl_table=11 KV790786.1 Genbank gene 66559 68694 . - . ID=gene-HMPREF3107_03385;Name=HMPREF3107_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03385 KV790786.1 Protein Homology CDS 66559 68694 . - 0 ID=cds-OFT02712.1;Parent=gene-HMPREF3107_03385;Dbxref=NCBI_GP:OFT02712.1;Name=OFT02712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679493.1;locus_tag=HMPREF3107_03385;product=PAS domain-containing sensor histidine kinase;protein_id=OFT02712.1;transl_table=11 KV790786.1 Genbank gene 68698 69285 . - . ID=gene-HMPREF3107_03390;Name=HMPREF3107_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03390 KV790786.1 Protein Homology CDS 68698 69285 . - 0 ID=cds-OFT02764.1;Parent=gene-HMPREF3107_03390;Dbxref=NCBI_GP:OFT02764.1;Name=OFT02764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012504040.1;locus_tag=HMPREF3107_03390;product=hypothetical protein;protein_id=OFT02764.1;transl_table=11 KV790786.1 Genbank gene 69302 70564 . - . ID=gene-HMPREF3107_03395;Name=HMPREF3107_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03395 KV790786.1 Protein Homology CDS 69302 70564 . - 0 ID=cds-OFT02713.1;Parent=gene-HMPREF3107_03395;Dbxref=NCBI_GP:OFT02713.1;Name=OFT02713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771147.1;locus_tag=HMPREF3107_03395;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=OFT02713.1;transl_table=11 KV790786.1 Genbank gene 70647 71285 . - . ID=gene-HMPREF3107_03400;Name=HMPREF3107_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03400 KV790786.1 GeneMarkS+ CDS 70647 71285 . - 0 ID=cds-OFT02714.1;Parent=gene-HMPREF3107_03400;Dbxref=NCBI_GP:OFT02714.1;Name=OFT02714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03400;product=hypothetical protein;protein_id=OFT02714.1;transl_table=11 KV790786.1 Genbank gene 71275 71706 . - . ID=gene-HMPREF3107_03405;Name=HMPREF3107_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03405 KV790786.1 Protein Homology CDS 71275 71706 . - 0 ID=cds-OFT02715.1;Parent=gene-HMPREF3107_03405;Dbxref=NCBI_GP:OFT02715.1;Name=OFT02715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018203992.1;locus_tag=HMPREF3107_03405;product=hypothetical protein;protein_id=OFT02715.1;transl_table=11 KV790786.1 Genbank gene 71742 72668 . - . ID=gene-HMPREF3107_03410;Name=HMPREF3107_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03410 KV790786.1 Protein Homology CDS 71742 72668 . - 0 ID=cds-OFT02716.1;Parent=gene-HMPREF3107_03410;Dbxref=NCBI_GP:OFT02716.1;Name=OFT02716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A9M463.1;locus_tag=HMPREF3107_03410;product=methionyl-tRNA formyltransferase;protein_id=OFT02716.1;transl_table=11 KV790786.1 Genbank gene 72801 73304 . - . ID=gene-HMPREF3107_03415;Name=HMPREF3107_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03415 KV790786.1 Protein Homology CDS 72801 73304 . - 0 ID=cds-OFT02717.1;Parent=gene-HMPREF3107_03415;Dbxref=NCBI_GP:OFT02717.1;Name=OFT02717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312688.1;locus_tag=HMPREF3107_03415;product=peptide deformylase;protein_id=OFT02717.1;transl_table=11 KV790786.1 Genbank gene 73477 74745 . + . ID=gene-HMPREF3107_03420;Name=HMPREF3107_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03420 KV790786.1 Protein Homology CDS 73477 74745 . + 0 ID=cds-OFT02718.1;Parent=gene-HMPREF3107_03420;Dbxref=NCBI_GP:OFT02718.1;Name=OFT02718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688304.1;locus_tag=HMPREF3107_03420;product=peptidoglycan-binding protein LysM;protein_id=OFT02718.1;transl_table=11 KV790786.1 Genbank gene 75124 75492 . + . ID=gene-HMPREF3107_03425;Name=HMPREF3107_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03425 KV790786.1 Protein Homology CDS 75124 75492 . + 0 ID=cds-OFT02719.1;Parent=gene-HMPREF3107_03425;Dbxref=NCBI_GP:OFT02719.1;Name=OFT02719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642681.1;locus_tag=HMPREF3107_03425;product=NADH-quinone oxidoreductase subunit A;protein_id=OFT02719.1;transl_table=11 KV790786.1 Genbank gene 75483 75962 . + . ID=gene-HMPREF3107_03430;Name=HMPREF3107_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03430 KV790786.1 Protein Homology CDS 75483 75962 . + 0 ID=cds-OFT02720.1;Parent=gene-HMPREF3107_03430;Dbxref=NCBI_GP:OFT02720.1;Name=OFT02720.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783526.1;locus_tag=HMPREF3107_03430;product=NADH dehydrogenase;protein_id=OFT02720.1;transl_table=11 KV790786.1 Genbank gene 75972 76562 . + . ID=gene-HMPREF3107_03435;Name=HMPREF3107_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03435 KV790786.1 Protein Homology CDS 75972 76562 . + 0 ID=cds-OFT02721.1;Parent=gene-HMPREF3107_03435;Dbxref=NCBI_GP:OFT02721.1;Name=OFT02721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822949.1;locus_tag=HMPREF3107_03435;product=NADH-quinone oxidoreductase subunit C;protein_id=OFT02721.1;transl_table=11 KV790786.1 Genbank gene 76552 77808 . + . ID=gene-HMPREF3107_03440;Name=HMPREF3107_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03440 KV790786.1 Protein Homology CDS 76552 77808 . + 0 ID=cds-OFT02722.1;Parent=gene-HMPREF3107_03440;Dbxref=NCBI_GP:OFT02722.1;Name=OFT02722.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573729.1;locus_tag=HMPREF3107_03440;product=NADH dehydrogenase;protein_id=OFT02722.1;transl_table=11 KV790786.1 Genbank gene 77808 78281 . + . ID=gene-HMPREF3107_03445;Name=HMPREF3107_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03445 KV790786.1 Protein Homology CDS 77808 78281 . + 0 ID=cds-OFT02723.1;Parent=gene-HMPREF3107_03445;Dbxref=NCBI_GP:OFT02723.1;Name=OFT02723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822947.1;locus_tag=HMPREF3107_03445;product=NADH dehydrogenase;protein_id=OFT02723.1;transl_table=11 KV790786.1 Genbank gene 78466 79761 . + . ID=gene-HMPREF3107_03450;Name=HMPREF3107_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03450 KV790786.1 Protein Homology CDS 78466 79761 . + 0 ID=cds-OFT02724.1;Parent=gene-HMPREF3107_03450;Dbxref=NCBI_GP:OFT02724.1;Name=OFT02724.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822945.1;locus_tag=HMPREF3107_03450;product=NADH-quinone oxidoreductase subunit F;protein_id=OFT02724.1;transl_table=11 KV790786.1 Genbank gene 79903 82161 . + . ID=gene-HMPREF3107_03455;Name=HMPREF3107_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03455 KV790786.1 Protein Homology CDS 79903 82161 . + 0 ID=cds-OFT02725.1;Parent=gene-HMPREF3107_03455;Dbxref=NCBI_GP:OFT02725.1;Name=OFT02725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822944.1;locus_tag=HMPREF3107_03455;product=NADH-quinone oxidoreductase subunit G;protein_id=OFT02725.1;transl_table=11 KV790786.1 Genbank gene 82164 83234 . + . ID=gene-HMPREF3107_03460;Name=HMPREF3107_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03460 KV790786.1 Protein Homology CDS 82164 83234 . + 0 ID=cds-OFT02726.1;Parent=gene-HMPREF3107_03460;Dbxref=NCBI_GP:OFT02726.1;Name=OFT02726.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272039.1;locus_tag=HMPREF3107_03460;product=NADH-quinone oxidoreductase subunit H;protein_id=OFT02726.1;transl_table=11 KV790786.1 Genbank gene 83309 83704 . + . ID=gene-HMPREF3107_03465;Name=HMPREF3107_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03465 KV790786.1 Protein Homology CDS 83309 83704 . + 0 ID=cds-OFT02727.1;Parent=gene-HMPREF3107_03465;Dbxref=NCBI_GP:OFT02727.1;Name=OFT02727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686531.1;locus_tag=HMPREF3107_03465;product=aldehyde-activating protein;protein_id=OFT02727.1;transl_table=11 KV790786.1 Genbank gene 83759 84238 . + . ID=gene-HMPREF3107_03470;Name=HMPREF3107_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03470 KV790786.1 Protein Homology CDS 83759 84238 . + 0 ID=cds-OFT02728.1;Parent=gene-HMPREF3107_03470;Dbxref=NCBI_GP:OFT02728.1;Name=OFT02728.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F623.1;locus_tag=HMPREF3107_03470;product=NADH-quinone oxidoreductase subunit I;protein_id=OFT02728.1;transl_table=11 KV790786.1 Genbank gene 84315 84917 . + . ID=gene-HMPREF3107_03475;Name=HMPREF3107_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03475 KV790786.1 GeneMarkS+ CDS 84315 84917 . + 0 ID=cds-OFT02729.1;Parent=gene-HMPREF3107_03475;Dbxref=NCBI_GP:OFT02729.1;Name=OFT02729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03475;product=hypothetical protein;protein_id=OFT02729.1;transl_table=11 KV790786.1 Genbank gene 84988 85650 . + . ID=gene-HMPREF3107_03480;Name=HMPREF3107_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03480 KV790786.1 Protein Homology CDS 84988 85650 . + 0 ID=cds-OFT02730.1;Parent=gene-HMPREF3107_03480;Dbxref=NCBI_GP:OFT02730.1;Name=OFT02730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750564.1;locus_tag=HMPREF3107_03480;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=OFT02730.1;transl_table=11 KV790786.1 Genbank gene 85647 85952 . + . ID=gene-HMPREF3107_03485;Name=HMPREF3107_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03485 KV790786.1 Protein Homology CDS 85647 85952 . + 0 ID=cds-OFT02731.1;Parent=gene-HMPREF3107_03485;Dbxref=NCBI_GP:OFT02731.1;Name=OFT02731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003787972.1;locus_tag=HMPREF3107_03485;product=NADH-quinone oxidoreductase subunit K;protein_id=OFT02731.1;transl_table=11 KV790786.1 Genbank gene 86071 88080 . + . ID=gene-HMPREF3107_03490;Name=HMPREF3107_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03490 KV790786.1 Protein Homology CDS 86071 88080 . + 0 ID=cds-OFT02732.1;Parent=gene-HMPREF3107_03490;Dbxref=NCBI_GP:OFT02732.1;Name=OFT02732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822936.1;locus_tag=HMPREF3107_03490;product=NADH-quinone oxidoreductase subunit L;protein_id=OFT02732.1;transl_table=11 KV790786.1 Genbank gene 88095 88406 . + . ID=gene-HMPREF3107_03495;Name=HMPREF3107_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03495 KV790786.1 Protein Homology CDS 88095 88406 . + 0 ID=cds-OFT02733.1;Parent=gene-HMPREF3107_03495;Dbxref=NCBI_GP:OFT02733.1;Name=OFT02733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822935.1;locus_tag=HMPREF3107_03495;product=chorismate mutase;protein_id=OFT02733.1;transl_table=11 KV790786.1 Genbank gene 88459 88779 . + . ID=gene-HMPREF3107_03500;Name=HMPREF3107_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03500 KV790786.1 Protein Homology CDS 88459 88779 . + 0 ID=cds-OFT02734.1;Parent=gene-HMPREF3107_03500;Dbxref=NCBI_GP:OFT02734.1;Name=OFT02734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822934.1;locus_tag=HMPREF3107_03500;product=cupin;protein_id=OFT02734.1;transl_table=11 KV790786.1 Genbank gene 88855 90357 . + . ID=gene-HMPREF3107_03505;Name=HMPREF3107_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03505 KV790786.1 Protein Homology CDS 88855 90357 . + 0 ID=cds-OFT02735.1;Parent=gene-HMPREF3107_03505;Dbxref=NCBI_GP:OFT02735.1;Name=OFT02735.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449632.1;locus_tag=HMPREF3107_03505;product=NADH-quinone oxidoreductase subunit M;protein_id=OFT02735.1;transl_table=11 KV790786.1 Genbank gene 90367 91812 . + . ID=gene-HMPREF3107_03510;Name=HMPREF3107_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03510 KV790786.1 Protein Homology CDS 90367 91812 . + 0 ID=cds-OFT02736.1;Parent=gene-HMPREF3107_03510;Dbxref=NCBI_GP:OFT02736.1;Name=OFT02736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773723.1;locus_tag=HMPREF3107_03510;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=OFT02736.1;transl_table=11 KV790786.1 Genbank gene 92033 92749 . - . ID=gene-HMPREF3107_03515;Name=HMPREF3107_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03515 KV790786.1 GeneMarkS+ CDS 92033 92749 . - 0 ID=cds-OFT02737.1;Parent=gene-HMPREF3107_03515;Dbxref=NCBI_GP:OFT02737.1;Name=OFT02737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03515;product=hypothetical protein;protein_id=OFT02737.1;transl_table=11 KV790786.1 Genbank gene 92832 93635 . - . ID=gene-HMPREF3107_03520;Name=HMPREF3107_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03520 KV790786.1 Protein Homology CDS 92832 93635 . - 0 ID=cds-OFT02738.1;Parent=gene-HMPREF3107_03520;Dbxref=NCBI_GP:OFT02738.1;Name=OFT02738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002253021.1;locus_tag=HMPREF3107_03520;product=acyltransferase;protein_id=OFT02738.1;transl_table=11 KV790786.1 Genbank gene 93669 94541 . - . ID=gene-HMPREF3107_03525;Name=HMPREF3107_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03525 KV790786.1 Protein Homology CDS 93669 94541 . - 0 ID=cds-OFT02739.1;Parent=gene-HMPREF3107_03525;Dbxref=NCBI_GP:OFT02739.1;Name=OFT02739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688345.1;locus_tag=HMPREF3107_03525;product=hypothetical protein;protein_id=OFT02739.1;transl_table=11 KV790786.1 Genbank gene 94692 94952 . - . ID=gene-HMPREF3107_03530;Name=HMPREF3107_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03530 KV790786.1 Protein Homology CDS 94692 94952 . - 0 ID=cds-OFT02740.1;Parent=gene-HMPREF3107_03530;Dbxref=NCBI_GP:OFT02740.1;Name=OFT02740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773714.1;locus_tag=HMPREF3107_03530;product=hypothetical protein;protein_id=OFT02740.1;transl_table=11 KV790786.1 Genbank gene 95040 96104 . - . ID=gene-HMPREF3107_03535;Name=HMPREF3107_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03535 KV790786.1 Protein Homology CDS 95040 96104 . - 0 ID=cds-OFT02741.1;Parent=gene-HMPREF3107_03535;Dbxref=NCBI_GP:OFT02741.1;Name=OFT02741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342357.1;locus_tag=HMPREF3107_03535;product=serine endopeptidase;protein_id=OFT02741.1;transl_table=11 KV790786.1 Genbank gene 96246 97511 . - . ID=gene-HMPREF3107_03540;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF3107_03540 KV790786.1 Protein Homology CDS 96246 97511 . - 0 ID=cds-OFT02742.1;Parent=gene-HMPREF3107_03540;Dbxref=NCBI_GP:OFT02742.1;Name=OFT02742.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743516.1;locus_tag=HMPREF3107_03540;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=OFT02742.1;transl_table=11 KV790786.1 Genbank gene 97861 98802 . + . ID=gene-HMPREF3107_03545;Name=HMPREF3107_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03545 KV790786.1 Protein Homology CDS 97861 98802 . + 0 ID=cds-OFT02743.1;Parent=gene-HMPREF3107_03545;Dbxref=NCBI_GP:OFT02743.1;Name=OFT02743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312204.1;locus_tag=HMPREF3107_03545;product=D-alanyl-D-alanine endopeptidase;protein_id=OFT02743.1;transl_table=11 KV790786.1 Genbank gene 99041 99607 . - . ID=gene-HMPREF3107_03550;Name=HMPREF3107_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03550 KV790786.1 Protein Homology CDS 99041 99607 . - 0 ID=cds-OFT02765.1;Parent=gene-HMPREF3107_03550;Dbxref=NCBI_GP:OFT02765.1;Name=OFT02765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343606.1;locus_tag=HMPREF3107_03550;product=adenine phosphoribosyltransferase;protein_id=OFT02765.1;transl_table=11 KV790786.1 Genbank gene 99715 100335 . + . ID=gene-HMPREF3107_03555;Name=HMPREF3107_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03555 KV790786.1 Protein Homology CDS 99715 100335 . + 0 ID=cds-OFT02744.1;Parent=gene-HMPREF3107_03555;Dbxref=NCBI_GP:OFT02744.1;Name=OFT02744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773696.1;locus_tag=HMPREF3107_03555;product=guanylate kinase;protein_id=OFT02744.1;transl_table=11 KV790786.1 Genbank gene 100379 100585 . + . ID=gene-HMPREF3107_03560;Name=HMPREF3107_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03560 KV790786.1 Protein Homology CDS 100379 100585 . + 0 ID=cds-OFT02745.1;Parent=gene-HMPREF3107_03560;Dbxref=NCBI_GP:OFT02745.1;Name=OFT02745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773694.1;locus_tag=HMPREF3107_03560;product=DNA-directed RNA polymerase subunit omega;protein_id=OFT02745.1;transl_table=11 KV790786.1 Genbank gene 100607 102763 . + . ID=gene-HMPREF3107_03565;Name=HMPREF3107_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03565 KV790786.1 Protein Homology CDS 100607 102763 . + 0 ID=cds-OFT02746.1;Parent=gene-HMPREF3107_03565;Dbxref=NCBI_GP:OFT02746.1;Name=OFT02746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426128.1;locus_tag=HMPREF3107_03565;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=OFT02746.1;transl_table=11 KV790786.1 Genbank gene 102850 103176 . - . ID=gene-HMPREF3107_03570;Name=HMPREF3107_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03570 KV790786.1 Protein Homology CDS 102850 103176 . - 0 ID=cds-OFT02747.1;Parent=gene-HMPREF3107_03570;Dbxref=NCBI_GP:OFT02747.1;Name=OFT02747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225793.1;locus_tag=HMPREF3107_03570;product=sulfurtransferase;protein_id=OFT02747.1;transl_table=11 KV790786.1 Genbank gene 103285 103941 . - . ID=gene-HMPREF3107_03575;Name=HMPREF3107_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03575 KV790786.1 Protein Homology CDS 103285 103941 . - 0 ID=cds-OFT02748.1;Parent=gene-HMPREF3107_03575;Dbxref=NCBI_GP:OFT02748.1;Name=OFT02748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449510.1;locus_tag=HMPREF3107_03575;product=protein-L-isoaspartate O-methyltransferase;protein_id=OFT02748.1;transl_table=11 KV790786.1 Genbank gene 104080 104619 . - . ID=gene-HMPREF3107_03580;Name=HMPREF3107_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03580 KV790786.1 Protein Homology CDS 104080 104619 . - 0 ID=cds-OFT02749.1;Parent=gene-HMPREF3107_03580;Dbxref=NCBI_GP:OFT02749.1;Name=OFT02749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773682.1;locus_tag=HMPREF3107_03580;product=ADP-ribose pyrophosphatase;protein_id=OFT02749.1;transl_table=11 KV790786.1 Genbank gene 104779 105222 . + . ID=gene-HMPREF3107_03585;Name=HMPREF3107_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03585 KV790786.1 GeneMarkS+ CDS 104779 105222 . + 0 ID=cds-OFT02750.1;Parent=gene-HMPREF3107_03585;Dbxref=NCBI_GP:OFT02750.1;Name=OFT02750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03585;product=hypothetical protein;protein_id=OFT02750.1;transl_table=11 KV790786.1 Genbank gene 105605 106078 . - . ID=gene-HMPREF3107_03590;Name=HMPREF3107_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03590 KV790786.1 Protein Homology CDS 105605 106078 . - 0 ID=cds-OFT02751.1;Parent=gene-HMPREF3107_03590;Dbxref=NCBI_GP:OFT02751.1;Name=OFT02751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773678.1;locus_tag=HMPREF3107_03590;product=peptidylprolyl isomerase;protein_id=OFT02751.1;transl_table=11 KV790786.1 Genbank gene 106576 106824 . + . ID=gene-HMPREF3107_03595;Name=HMPREF3107_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03595 KV790786.1 Protein Homology CDS 106576 106824 . + 0 ID=cds-OFT02752.1;Parent=gene-HMPREF3107_03595;Dbxref=NCBI_GP:OFT02752.1;Name=OFT02752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285065.1;locus_tag=HMPREF3107_03595;product=hypothetical protein;protein_id=OFT02752.1;transl_table=11 KV790786.1 Genbank gene 107071 108447 . + . ID=gene-HMPREF3107_03600;Name=HMPREF3107_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03600 KV790786.1 Protein Homology CDS 107071 108447 . + 0 ID=cds-OFT02620.1;Parent=gene-HMPREF3107_03600;Dbxref=NCBI_GP:OFT02620.1;Name=OFT02620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773670.1;locus_tag=HMPREF3107_03600;product=oxidoreductase;protein_id=OFT02620.1;transl_table=11 KV790786.1 Genbank gene 108447 108656 . + . ID=gene-HMPREF3107_03605;Name=HMPREF3107_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03605 KV790786.1 GeneMarkS+ CDS 108447 108656 . + 0 ID=cds-OFT02621.1;Parent=gene-HMPREF3107_03605;Dbxref=NCBI_GP:OFT02621.1;Name=OFT02621.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03605;product=hypothetical protein;protein_id=OFT02621.1;transl_table=11 KV790786.1 Genbank gene 108687 109391 . + . ID=gene-HMPREF3107_03610;Name=HMPREF3107_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03610 KV790786.1 GeneMarkS+ CDS 108687 109391 . + 0 ID=cds-OFT02622.1;Parent=gene-HMPREF3107_03610;Dbxref=NCBI_GP:OFT02622.1;Name=OFT02622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03610;product=hypothetical protein;protein_id=OFT02622.1;transl_table=11 KV790786.1 Genbank gene 109436 109882 . + . ID=gene-HMPREF3107_03615;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=HMPREF3107_03615 KV790786.1 Protein Homology CDS 109436 109882 . + 0 ID=cds-OFT02636.1;Parent=gene-HMPREF3107_03615;Dbxref=NCBI_GP:OFT02636.1;Name=OFT02636.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343808.1;locus_tag=HMPREF3107_03615;product=ribonuclease HI;protein_id=OFT02636.1;transl_table=11 KV790786.1 Genbank gene 110262 110783 . + . ID=gene-HMPREF3107_03620;Name=HMPREF3107_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03620 KV790786.1 Protein Homology CDS 110262 110783 . + 0 ID=cds-OFT02637.1;Parent=gene-HMPREF3107_03620;Dbxref=NCBI_GP:OFT02637.1;Name=OFT02637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311714.1;locus_tag=HMPREF3107_03620;product=hypothetical protein;protein_id=OFT02637.1;transl_table=11 KV790786.1 Genbank gene 110809 111003 . + . ID=gene-HMPREF3107_03625;Name=HMPREF3107_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03625 KV790786.1 GeneMarkS+ CDS 110809 111003 . + 0 ID=cds-OFT02623.1;Parent=gene-HMPREF3107_03625;Dbxref=NCBI_GP:OFT02623.1;Name=OFT02623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03625;product=hypothetical protein;protein_id=OFT02623.1;transl_table=11 KV790786.1 Genbank gene 111026 112336 . + . ID=gene-HMPREF3107_03630;Name=HMPREF3107_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03630 KV790786.1 Protein Homology CDS 111026 112336 . + 0 ID=cds-OFT02624.1;Parent=gene-HMPREF3107_03630;Dbxref=NCBI_GP:OFT02624.1;Name=OFT02624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742150.1;locus_tag=HMPREF3107_03630;product=trigger factor;protein_id=OFT02624.1;transl_table=11 KV790786.1 Genbank gene 112410 113045 . + . ID=gene-HMPREF3107_03635;Name=HMPREF3107_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03635 KV790786.1 Protein Homology CDS 112410 113045 . + 0 ID=cds-OFT02625.1;Parent=gene-HMPREF3107_03635;Dbxref=NCBI_GP:OFT02625.1;Name=OFT02625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773657.1;locus_tag=HMPREF3107_03635;product=ATP-dependent Clp protease proteolytic subunit;protein_id=OFT02625.1;transl_table=11 KV790786.1 Genbank gene 113328 114353 . - . ID=gene-HMPREF3107_03640;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=HMPREF3107_03640 KV790786.1 Protein Homology CDS 113328 114353 . - 0 ID=cds-OFT02626.1;Parent=gene-HMPREF3107_03640;Dbxref=NCBI_GP:OFT02626.1;Name=OFT02626.1;Note=Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=trpD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773656.1;locus_tag=HMPREF3107_03640;product=anthranilate phosphoribosyltransferase;protein_id=OFT02626.1;transl_table=11 KV790786.1 Genbank gene 114759 115319 . - . ID=gene-HMPREF3107_03645;Name=HMPREF3107_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03645 KV790786.1 Protein Homology CDS 114759 115319 . - 0 ID=cds-OFT02627.1;Parent=gene-HMPREF3107_03645;Dbxref=NCBI_GP:OFT02627.1;Name=OFT02627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZQ8.1;locus_tag=HMPREF3107_03645;product=elongation factor P;protein_id=OFT02627.1;transl_table=11 KV790786.1 Genbank gene 115366 116508 . - . ID=gene-HMPREF3107_03650;Name=HMPREF3107_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03650 KV790786.1 Protein Homology CDS 115366 116508 . - 0 ID=cds-OFT02628.1;Parent=gene-HMPREF3107_03650;Dbxref=NCBI_GP:OFT02628.1;Name=OFT02628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685349.1;locus_tag=HMPREF3107_03650;product=hypothetical protein;protein_id=OFT02628.1;transl_table=11 KV790786.1 Genbank gene 117067 117142 . + . ID=gene-HMPREF3107_03655;Name=HMPREF3107_03655;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_03655 KV790786.1 tRNAscan-SE tRNA 117067 117142 . + . ID=rna-HMPREF3107_03655;Parent=gene-HMPREF3107_03655;anticodon=(pos:117100..117102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_03655;product=tRNA-Thr KV790786.1 tRNAscan-SE exon 117067 117142 . + . ID=exon-HMPREF3107_03655-1;Parent=rna-HMPREF3107_03655;anticodon=(pos:117100..117102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_03655;product=tRNA-Thr KV790786.1 Genbank gene 117440 118966 . + . ID=gene-HMPREF3107_03660;Name=HMPREF3107_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03660 KV790786.1 Protein Homology CDS 117440 118966 . + 0 ID=cds-OFT02629.1;Parent=gene-HMPREF3107_03660;Dbxref=NCBI_GP:OFT02629.1;Name=OFT02629.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773641.1;locus_tag=HMPREF3107_03660;product=sodium:proline symporter;protein_id=OFT02629.1;transl_table=11 KV790786.1 Genbank gene 119156 122764 . + . ID=gene-HMPREF3107_03665;Name=HMPREF3107_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03665 KV790786.1 Protein Homology CDS 119156 122764 . + 0 ID=cds-OFT02630.1;Parent=gene-HMPREF3107_03665;Dbxref=NCBI_GP:OFT02630.1;Name=OFT02630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747536.1;locus_tag=HMPREF3107_03665;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=OFT02630.1;transl_table=11 KV790786.1 Genbank gene 122964 123317 . + . ID=gene-HMPREF3107_03670;Name=HMPREF3107_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03670 KV790786.1 GeneMarkS+ CDS 122964 123317 . + 0 ID=cds-OFT02631.1;Parent=gene-HMPREF3107_03670;Dbxref=NCBI_GP:OFT02631.1;Name=OFT02631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03670;product=hypothetical protein;protein_id=OFT02631.1;transl_table=11 KV790786.1 Genbank gene 123492 124556 . + . ID=gene-HMPREF3107_03675;Name=HMPREF3107_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03675 KV790786.1 Protein Homology CDS 123492 124556 . + 0 ID=cds-OFT02632.1;Parent=gene-HMPREF3107_03675;Dbxref=NCBI_GP:OFT02632.1;Name=OFT02632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273070.1;locus_tag=HMPREF3107_03675;product=butanediol dehydrogenase;protein_id=OFT02632.1;transl_table=11 KV790786.1 Genbank gene 124628 125842 . - . ID=gene-HMPREF3107_03680;Name=HMPREF3107_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03680 KV790786.1 Protein Homology CDS 124628 125842 . - 0 ID=cds-OFT02633.1;Parent=gene-HMPREF3107_03680;Dbxref=NCBI_GP:OFT02633.1;Name=OFT02633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773628.1;locus_tag=HMPREF3107_03680;product=uracil permease;protein_id=OFT02633.1;transl_table=11 KV790786.1 Genbank gene 126271 127089 . + . ID=gene-HMPREF3107_03685;Name=HMPREF3107_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03685 KV790786.1 GeneMarkS+ CDS 126271 127089 . + 0 ID=cds-OFT02634.1;Parent=gene-HMPREF3107_03685;Dbxref=NCBI_GP:OFT02634.1;Name=OFT02634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03685;product=hypothetical protein;protein_id=OFT02634.1;transl_table=11 KV790786.1 Genbank gene 127267 127446 . - . ID=gene-HMPREF3107_03690;Name=HMPREF3107_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03690 KV790786.1 GeneMarkS+ CDS 127267 127446 . - 0 ID=cds-OFT02635.1;Parent=gene-HMPREF3107_03690;Dbxref=NCBI_GP:OFT02635.1;Name=OFT02635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03690;product=hypothetical protein;protein_id=OFT02635.1;transl_table=11 ##sequence-region KV790787.1 1 39509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790787.1 Genbank region 1 39509 . + . ID=KV790787.1:1..39509;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790787.1 Genbank pseudogene 1 266 . - . ID=gene-HMPREF3107_03695;Name=HMPREF3107_03695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_03695;pseudo=true KV790787.1 GeneMarkS+ CDS 1 266 . - 0 ID=cds-HMPREF3107_03695;Parent=gene-HMPREF3107_03695;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03695;product=hypothetical protein;pseudo=true;transl_table=11 KV790787.1 Genbank gene 278 571 . - . ID=gene-HMPREF3107_03700;Name=HMPREF3107_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03700 KV790787.1 Protein Homology CDS 278 571 . - 0 ID=cds-OFT02615.1;Parent=gene-HMPREF3107_03700;Dbxref=NCBI_GP:OFT02615.1;Name=OFT02615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774562.1;locus_tag=HMPREF3107_03700;product=hypothetical protein;protein_id=OFT02615.1;transl_table=11 KV790787.1 Genbank gene 671 1198 . - . ID=gene-HMPREF3107_03705;Name=HMPREF3107_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03705 KV790787.1 Protein Homology CDS 671 1198 . - 0 ID=cds-OFT02593.1;Parent=gene-HMPREF3107_03705;Dbxref=NCBI_GP:OFT02593.1;Name=OFT02593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774563.1;locus_tag=HMPREF3107_03705;product=hypothetical protein;protein_id=OFT02593.1;transl_table=11 KV790787.1 Genbank gene 1520 1855 . - . ID=gene-HMPREF3107_03710;Name=HMPREF3107_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03710 KV790787.1 Protein Homology CDS 1520 1855 . - 0 ID=cds-OFT02594.1;Parent=gene-HMPREF3107_03710;Dbxref=NCBI_GP:OFT02594.1;Name=OFT02594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011189540.1;locus_tag=HMPREF3107_03710;product=hypothetical protein;protein_id=OFT02594.1;transl_table=11 KV790787.1 Genbank gene 1885 2559 . - . ID=gene-HMPREF3107_03715;Name=HMPREF3107_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03715 KV790787.1 Protein Homology CDS 1885 2559 . - 0 ID=cds-OFT02595.1;Parent=gene-HMPREF3107_03715;Dbxref=NCBI_GP:OFT02595.1;Name=OFT02595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KU78.1;locus_tag=HMPREF3107_03715;product=hypothetical protein;protein_id=OFT02595.1;transl_table=11 KV790787.1 Genbank gene 2606 3895 . - . ID=gene-HMPREF3107_03720;Name=HMPREF3107_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03720 KV790787.1 Protein Homology CDS 2606 3895 . - 0 ID=cds-OFT02596.1;Parent=gene-HMPREF3107_03720;Dbxref=NCBI_GP:OFT02596.1;Name=OFT02596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019390369.1;locus_tag=HMPREF3107_03720;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=OFT02596.1;transl_table=11 KV790787.1 Genbank gene 4019 4687 . + . ID=gene-HMPREF3107_03725;Name=HMPREF3107_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03725 KV790787.1 Protein Homology CDS 4019 4687 . + 0 ID=cds-OFT02597.1;Parent=gene-HMPREF3107_03725;Dbxref=NCBI_GP:OFT02597.1;Name=OFT02597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774569.1;locus_tag=HMPREF3107_03725;product=cytidylate kinase;protein_id=OFT02597.1;transl_table=11 KV790787.1 Genbank gene 4842 6521 . + . ID=gene-HMPREF3107_03730;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=HMPREF3107_03730 KV790787.1 Protein Homology CDS 4842 6521 . + 0 ID=cds-OFT02616.1;Parent=gene-HMPREF3107_03730;Dbxref=NCBI_GP:OFT02616.1;Name=OFT02616.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343488.1;locus_tag=HMPREF3107_03730;product=30S ribosomal protein S1;protein_id=OFT02616.1;transl_table=11 KV790787.1 Genbank gene 6537 6851 . + . ID=gene-HMPREF3107_03735;Name=HMPREF3107_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03735 KV790787.1 Protein Homology CDS 6537 6851 . + 0 ID=cds-OFT02598.1;Parent=gene-HMPREF3107_03735;Dbxref=NCBI_GP:OFT02598.1;Name=OFT02598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774573.1;locus_tag=HMPREF3107_03735;product=integration host factor subunit beta;protein_id=OFT02598.1;transl_table=11 KV790787.1 Genbank gene 6979 8124 . + . ID=gene-HMPREF3107_03740;Name=HMPREF3107_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03740 KV790787.1 Protein Homology CDS 6979 8124 . + 0 ID=cds-OFT02599.1;Parent=gene-HMPREF3107_03740;Dbxref=NCBI_GP:OFT02599.1;Name=OFT02599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774574.1;locus_tag=HMPREF3107_03740;product=ATPase;protein_id=OFT02599.1;transl_table=11 KV790787.1 Genbank gene 8242 8667 . + . ID=gene-HMPREF3107_03745;Name=HMPREF3107_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03745 KV790787.1 Protein Homology CDS 8242 8667 . + 0 ID=cds-OFT02600.1;Parent=gene-HMPREF3107_03745;Dbxref=NCBI_GP:OFT02600.1;Name=OFT02600.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RMG0.1;locus_tag=HMPREF3107_03745;product=nucleoside-diphosphate kinase;protein_id=OFT02600.1;transl_table=11 KV790787.1 Genbank gene 8800 9888 . + . ID=gene-HMPREF3107_03750;Name=HMPREF3107_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03750 KV790787.1 Protein Homology CDS 8800 9888 . + 0 ID=cds-OFT02617.1;Parent=gene-HMPREF3107_03750;Dbxref=NCBI_GP:OFT02617.1;Name=OFT02617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427259.1;locus_tag=HMPREF3107_03750;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=OFT02617.1;transl_table=11 KV790787.1 Genbank gene 9899 10657 . + . ID=gene-HMPREF3107_03755;Name=HMPREF3107_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03755 KV790787.1 Protein Homology CDS 9899 10657 . + 0 ID=cds-OFT02601.1;Parent=gene-HMPREF3107_03755;Dbxref=NCBI_GP:OFT02601.1;Name=OFT02601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774583.1;locus_tag=HMPREF3107_03755;product=type IV pilus biogenesis/stability protein PilW;protein_id=OFT02601.1;transl_table=11 KV790787.1 Genbank gene 10662 11504 . + . ID=gene-HMPREF3107_03760;Name=HMPREF3107_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03760 KV790787.1 Protein Homology CDS 10662 11504 . + 0 ID=cds-OFT02602.1;Parent=gene-HMPREF3107_03760;Dbxref=NCBI_GP:OFT02602.1;Name=OFT02602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774586.1;locus_tag=HMPREF3107_03760;product=hypothetical protein;protein_id=OFT02602.1;transl_table=11 KV790787.1 Genbank gene 11511 12779 . + . ID=gene-HMPREF3107_03765;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HMPREF3107_03765 KV790787.1 Protein Homology CDS 11511 12779 . + 0 ID=cds-OFT02603.1;Parent=gene-HMPREF3107_03765;Dbxref=NCBI_GP:OFT02603.1;Name=OFT02603.1;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;gbkey=CDS;gene=ispG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427256.1;locus_tag=HMPREF3107_03765;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=OFT02603.1;transl_table=11 KV790787.1 Genbank gene 12806 13180 . + . ID=gene-HMPREF3107_03770;Name=HMPREF3107_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03770 KV790787.1 Protein Homology CDS 12806 13180 . + 0 ID=cds-OFT02604.1;Parent=gene-HMPREF3107_03770;Dbxref=NCBI_GP:OFT02604.1;Name=OFT02604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774591.1;locus_tag=HMPREF3107_03770;product=hypothetical protein;protein_id=OFT02604.1;transl_table=11 KV790787.1 Genbank gene 13261 14553 . + . ID=gene-HMPREF3107_03775;Name=HMPREF3107_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03775 KV790787.1 Protein Homology CDS 13261 14553 . + 0 ID=cds-OFT02605.1;Parent=gene-HMPREF3107_03775;Dbxref=NCBI_GP:OFT02605.1;Name=OFT02605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774593.1;locus_tag=HMPREF3107_03775;product=histidine--tRNA ligase;protein_id=OFT02605.1;transl_table=11 KV790787.1 Genbank gene 14554 15183 . + . ID=gene-HMPREF3107_03780;Name=HMPREF3107_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03780 KV790787.1 Protein Homology CDS 14554 15183 . + 0 ID=cds-OFT02606.1;Parent=gene-HMPREF3107_03780;Dbxref=NCBI_GP:OFT02606.1;Name=OFT02606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742838.1;locus_tag=HMPREF3107_03780;product=hypothetical protein;protein_id=OFT02606.1;transl_table=11 KV790787.1 Genbank gene 15469 16944 . + . ID=gene-HMPREF3107_03785;Name=HMPREF3107_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03785 KV790787.1 Protein Homology CDS 15469 16944 . + 0 ID=cds-OFT02607.1;Parent=gene-HMPREF3107_03785;Dbxref=NCBI_GP:OFT02607.1;Name=OFT02607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774596.1;locus_tag=HMPREF3107_03785;product=ribosome biogenesis GTPase Der;protein_id=OFT02607.1;transl_table=11 KV790787.1 Genbank gene 17056 17235 . + . ID=gene-HMPREF3107_03790;Name=HMPREF3107_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03790 KV790787.1 GeneMarkS+ CDS 17056 17235 . + 0 ID=cds-OFT02608.1;Parent=gene-HMPREF3107_03790;Dbxref=NCBI_GP:OFT02608.1;Name=OFT02608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03790;product=hypothetical protein;protein_id=OFT02608.1;transl_table=11 KV790787.1 Genbank gene 17489 18133 . - . ID=gene-HMPREF3107_03795;Name=HMPREF3107_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03795 KV790787.1 Protein Homology CDS 17489 18133 . - 0 ID=cds-OFT02609.1;Parent=gene-HMPREF3107_03795;Dbxref=NCBI_GP:OFT02609.1;Name=OFT02609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774623.1;locus_tag=HMPREF3107_03795;product=acyltransferase;protein_id=OFT02609.1;transl_table=11 KV790787.1 Genbank gene 18150 19415 . - . ID=gene-HMPREF3107_03800;Name=HMPREF3107_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03800 KV790787.1 Protein Homology CDS 18150 19415 . - 0 ID=cds-OFT02610.1;Parent=gene-HMPREF3107_03800;Dbxref=NCBI_GP:OFT02610.1;Name=OFT02610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774625.1;locus_tag=HMPREF3107_03800;product=SAM-dependent methyltransferase;protein_id=OFT02610.1;transl_table=11 KV790787.1 Genbank gene 19778 20866 . + . ID=gene-HMPREF3107_03805;Name=HMPREF3107_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03805 KV790787.1 Protein Homology CDS 19778 20866 . + 0 ID=cds-OFT02611.1;Parent=gene-HMPREF3107_03805;Dbxref=NCBI_GP:OFT02611.1;Name=OFT02611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774630.1;locus_tag=HMPREF3107_03805;product=methyltransferase;protein_id=OFT02611.1;transl_table=11 KV790787.1 Genbank gene 21035 21679 . - . ID=gene-HMPREF3107_03810;Name=HMPREF3107_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03810 KV790787.1 Protein Homology CDS 21035 21679 . - 0 ID=cds-OFT02612.1;Parent=gene-HMPREF3107_03810;Dbxref=NCBI_GP:OFT02612.1;Name=OFT02612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774631.1;locus_tag=HMPREF3107_03810;product=hypothetical protein;protein_id=OFT02612.1;transl_table=11 KV790787.1 Genbank gene 21799 22146 . + . ID=gene-HMPREF3107_03815;Name=HMPREF3107_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03815 KV790787.1 Protein Homology CDS 21799 22146 . + 0 ID=cds-OFT02618.1;Parent=gene-HMPREF3107_03815;Dbxref=NCBI_GP:OFT02618.1;Name=OFT02618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343420.1;locus_tag=HMPREF3107_03815;product=arsenate reductase;protein_id=OFT02618.1;transl_table=11 KV790787.1 Genbank gene 22328 24112 . + . ID=gene-HMPREF3107_03820;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=HMPREF3107_03820 KV790787.1 Protein Homology CDS 22328 24112 . + 0 ID=cds-OFT02613.1;Parent=gene-HMPREF3107_03820;Dbxref=NCBI_GP:OFT02613.1;Name=OFT02613.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774636.1;locus_tag=HMPREF3107_03820;product=sulfite reductase subunit alpha;protein_id=OFT02613.1;transl_table=11 KV790787.1 Genbank gene 24190 24669 . - . ID=gene-HMPREF3107_03825;Name=HMPREF3107_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03825 KV790787.1 Protein Homology CDS 24190 24669 . - 0 ID=cds-OFT02614.1;Parent=gene-HMPREF3107_03825;Dbxref=NCBI_GP:OFT02614.1;Name=OFT02614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216871.1;locus_tag=HMPREF3107_03825;product=acyl-CoA thioesterase;protein_id=OFT02614.1;transl_table=11 KV790787.1 Genbank gene 25017 26087 . - . ID=gene-HMPREF3107_03830;Name=HMPREF3107_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03830 KV790787.1 Protein Homology CDS 25017 26087 . - 0 ID=cds-OFT02579.1;Parent=gene-HMPREF3107_03830;Dbxref=NCBI_GP:OFT02579.1;Name=OFT02579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520352.1;locus_tag=HMPREF3107_03830;product=magnesium and cobalt transport protein CorA;protein_id=OFT02579.1;transl_table=11 KV790787.1 Genbank gene 26461 28272 . - . ID=gene-HMPREF3107_03835;Name=HMPREF3107_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03835 KV790787.1 Protein Homology CDS 26461 28272 . - 0 ID=cds-OFT02580.1;Parent=gene-HMPREF3107_03835;Dbxref=NCBI_GP:OFT02580.1;Name=OFT02580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712017.1;locus_tag=HMPREF3107_03835;product=GTP-binding protein TypA;protein_id=OFT02580.1;transl_table=11 KV790787.1 Genbank gene 28671 29135 . + . ID=gene-HMPREF3107_03840;Name=HMPREF3107_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03840 KV790787.1 Protein Homology CDS 28671 29135 . + 0 ID=cds-OFT02581.1;Parent=gene-HMPREF3107_03840;Dbxref=NCBI_GP:OFT02581.1;Name=OFT02581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675404.1;locus_tag=HMPREF3107_03840;product=bacterioferritin;protein_id=OFT02581.1;transl_table=11 KV790787.1 Genbank gene 29157 29630 . + . ID=gene-HMPREF3107_03845;Name=HMPREF3107_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03845 KV790787.1 Protein Homology CDS 29157 29630 . + 0 ID=cds-OFT02582.1;Parent=gene-HMPREF3107_03845;Dbxref=NCBI_GP:OFT02582.1;Name=OFT02582.1;Note=iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687569.1;locus_tag=HMPREF3107_03845;product=bacterioferritin;protein_id=OFT02582.1;transl_table=11 KV790787.1 Genbank gene 29770 30423 . + . ID=gene-HMPREF3107_03850;Name=HMPREF3107_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03850 KV790787.1 Protein Homology CDS 29770 30423 . + 0 ID=cds-OFT02591.1;Parent=gene-HMPREF3107_03850;Dbxref=NCBI_GP:OFT02591.1;Name=OFT02591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774657.1;locus_tag=HMPREF3107_03850;product=isomerase/hydrolase;protein_id=OFT02591.1;transl_table=11 KV790787.1 Genbank gene 30575 31807 . + . ID=gene-HMPREF3107_03855;Name=HMPREF3107_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03855 KV790787.1 Protein Homology CDS 30575 31807 . + 0 ID=cds-OFT02583.1;Parent=gene-HMPREF3107_03855;Dbxref=NCBI_GP:OFT02583.1;Name=OFT02583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774660.1;locus_tag=HMPREF3107_03855;product=sodium/glutamate symporter;protein_id=OFT02583.1;transl_table=11 KV790787.1 Genbank gene 32118 33026 . + . ID=gene-HMPREF3107_03860;Name=HMPREF3107_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03860 KV790787.1 Protein Homology CDS 32118 33026 . + 0 ID=cds-OFT02592.1;Parent=gene-HMPREF3107_03860;Dbxref=NCBI_GP:OFT02592.1;Name=OFT02592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774663.1;locus_tag=HMPREF3107_03860;product=hypothetical protein;protein_id=OFT02592.1;transl_table=11 KV790787.1 Genbank gene 33146 33565 . - . ID=gene-HMPREF3107_03865;Name=HMPREF3107_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03865 KV790787.1 GeneMarkS+ CDS 33146 33565 . - 0 ID=cds-OFT02584.1;Parent=gene-HMPREF3107_03865;Dbxref=NCBI_GP:OFT02584.1;Name=OFT02584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03865;product=hypothetical protein;protein_id=OFT02584.1;transl_table=11 KV790787.1 Genbank gene 33813 34598 . - . ID=gene-HMPREF3107_03870;Name=HMPREF3107_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03870 KV790787.1 Protein Homology CDS 33813 34598 . - 0 ID=cds-OFT02585.1;Parent=gene-HMPREF3107_03870;Dbxref=NCBI_GP:OFT02585.1;Name=OFT02585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774669.1;locus_tag=HMPREF3107_03870;product=exodeoxyribonuclease III;protein_id=OFT02585.1;transl_table=11 KV790787.1 Genbank gene 34667 34945 . - . ID=gene-HMPREF3107_03875;Name=HMPREF3107_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03875 KV790787.1 Protein Homology CDS 34667 34945 . - 0 ID=cds-OFT02586.1;Parent=gene-HMPREF3107_03875;Dbxref=NCBI_GP:OFT02586.1;Name=OFT02586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774674.1;locus_tag=HMPREF3107_03875;product=biofilm growth-associated repressor family protein;protein_id=OFT02586.1;transl_table=11 KV790787.1 Genbank gene 35301 36026 . - . ID=gene-HMPREF3107_03880;Name=HMPREF3107_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03880 KV790787.1 Protein Homology CDS 35301 36026 . - 0 ID=cds-OFT02587.1;Parent=gene-HMPREF3107_03880;Dbxref=NCBI_GP:OFT02587.1;Name=OFT02587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774676.1;locus_tag=HMPREF3107_03880;product=hypothetical protein;protein_id=OFT02587.1;transl_table=11 KV790787.1 Genbank gene 36023 36601 . - . ID=gene-HMPREF3107_03885;Name=HMPREF3107_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03885 KV790787.1 Protein Homology CDS 36023 36601 . - 0 ID=cds-OFT02588.1;Parent=gene-HMPREF3107_03885;Dbxref=NCBI_GP:OFT02588.1;Name=OFT02588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774677.1;locus_tag=HMPREF3107_03885;product=hypothetical protein;protein_id=OFT02588.1;transl_table=11 KV790787.1 Genbank gene 36598 37632 . - . ID=gene-HMPREF3107_03890;Name=HMPREF3107_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03890 KV790787.1 Protein Homology CDS 36598 37632 . - 0 ID=cds-OFT02589.1;Parent=gene-HMPREF3107_03890;Dbxref=NCBI_GP:OFT02589.1;Name=OFT02589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342657.1;locus_tag=HMPREF3107_03890;product=Rieske family iron-sulfur cluster-binding protein;protein_id=OFT02589.1;transl_table=11 KV790787.1 Genbank gene 37786 39282 . - . ID=gene-HMPREF3107_03895;Name=HMPREF3107_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03895 KV790787.1 Protein Homology CDS 37786 39282 . - 0 ID=cds-OFT02590.1;Parent=gene-HMPREF3107_03895;Dbxref=NCBI_GP:OFT02590.1;Name=OFT02590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774693.1;locus_tag=HMPREF3107_03895;product=GH3 auxin-responsive promoter;protein_id=OFT02590.1;transl_table=11 ##sequence-region KV790788.1 1 31255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790788.1 Genbank region 1 31255 . + . ID=KV790788.1:1..31255;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790788.1 Genbank gene 39 458 . - . ID=gene-HMPREF3107_03900;Name=HMPREF3107_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03900 KV790788.1 GeneMarkS+ CDS 39 458 . - 0 ID=cds-OFT02552.1;Parent=gene-HMPREF3107_03900;Dbxref=NCBI_GP:OFT02552.1;Name=OFT02552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03900;product=hypothetical protein;protein_id=OFT02552.1;transl_table=11 KV790788.1 Genbank gene 787 1566 . + . ID=gene-HMPREF3107_03905;Name=HMPREF3107_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03905 KV790788.1 Protein Homology CDS 787 1566 . + 0 ID=cds-OFT02553.1;Parent=gene-HMPREF3107_03905;Dbxref=NCBI_GP:OFT02553.1;Name=OFT02553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271458.1;locus_tag=HMPREF3107_03905;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=OFT02553.1;transl_table=11 KV790788.1 Genbank gene 1578 2303 . + . ID=gene-HMPREF3107_03910;Name=HMPREF3107_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03910 KV790788.1 Protein Homology CDS 1578 2303 . + 0 ID=cds-OFT02554.1;Parent=gene-HMPREF3107_03910;Dbxref=NCBI_GP:OFT02554.1;Name=OFT02554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427561.1;locus_tag=HMPREF3107_03910;product=polar amino acid ABC transporter ATP-binding protein;protein_id=OFT02554.1;transl_table=11 KV790788.1 Genbank gene 2382 3260 . - . ID=gene-HMPREF3107_03915;Name=HMPREF3107_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03915 KV790788.1 Protein Homology CDS 2382 3260 . - 0 ID=cds-OFT02555.1;Parent=gene-HMPREF3107_03915;Dbxref=NCBI_GP:OFT02555.1;Name=OFT02555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741690.1;locus_tag=HMPREF3107_03915;product=oxidoreductase;protein_id=OFT02555.1;transl_table=11 KV790788.1 Genbank gene 3373 3696 . - . ID=gene-HMPREF3107_03920;Name=HMPREF3107_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03920 KV790788.1 Protein Homology CDS 3373 3696 . - 0 ID=cds-OFT02556.1;Parent=gene-HMPREF3107_03920;Dbxref=NCBI_GP:OFT02556.1;Name=OFT02556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213914.1;locus_tag=HMPREF3107_03920;product=hypothetical protein;protein_id=OFT02556.1;transl_table=11 KV790788.1 Genbank gene 3991 5004 . - . ID=gene-HMPREF3107_03925;Name=HMPREF3107_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03925 KV790788.1 Protein Homology CDS 3991 5004 . - 0 ID=cds-OFT02557.1;Parent=gene-HMPREF3107_03925;Dbxref=NCBI_GP:OFT02557.1;Name=OFT02557.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7P0H9.1;locus_tag=HMPREF3107_03925;product=ketol-acid reductoisomerase;protein_id=OFT02557.1;transl_table=11 KV790788.1 Genbank gene 5051 5353 . - . ID=gene-HMPREF3107_03930;Name=HMPREF3107_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03930 KV790788.1 Protein Homology CDS 5051 5353 . - 0 ID=cds-OFT02558.1;Parent=gene-HMPREF3107_03930;Dbxref=NCBI_GP:OFT02558.1;Name=OFT02558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772003.1;locus_tag=HMPREF3107_03930;product=antibiotic biosynthesis monooxygenase;protein_id=OFT02558.1;transl_table=11 KV790788.1 Genbank gene 5424 5915 . - . ID=gene-HMPREF3107_03935;Name=HMPREF3107_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03935 KV790788.1 Protein Homology CDS 5424 5915 . - 0 ID=cds-OFT02559.1;Parent=gene-HMPREF3107_03935;Dbxref=NCBI_GP:OFT02559.1;Name=OFT02559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003706746.1;locus_tag=HMPREF3107_03935;product=acetolactate synthase small subunit;protein_id=OFT02559.1;transl_table=11 KV790788.1 Genbank gene 5912 7693 . - . ID=gene-HMPREF3107_03940;Name=HMPREF3107_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03940 KV790788.1 Protein Homology CDS 5912 7693 . - 0 ID=cds-OFT02560.1;Parent=gene-HMPREF3107_03940;Dbxref=NCBI_GP:OFT02560.1;Name=OFT02560.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781177.1;locus_tag=HMPREF3107_03940;product=acetolactate synthase 3 catalytic subunit;protein_id=OFT02560.1;transl_table=11 KV790788.1 Genbank gene 7985 8060 . - . ID=gene-HMPREF3107_03945;Name=HMPREF3107_03945;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_03945 KV790788.1 tRNAscan-SE tRNA 7985 8060 . - . ID=rna-HMPREF3107_03945;Parent=gene-HMPREF3107_03945;anticodon=(pos:complement(8025..8027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_03945;product=tRNA-Arg KV790788.1 tRNAscan-SE exon 7985 8060 . - . ID=exon-HMPREF3107_03945-1;Parent=rna-HMPREF3107_03945;anticodon=(pos:complement(8025..8027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_03945;product=tRNA-Arg KV790788.1 Genbank gene 8330 9199 . + . ID=gene-HMPREF3107_03950;Name=HMPREF3107_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03950 KV790788.1 Protein Homology CDS 8330 9199 . + 0 ID=cds-OFT02561.1;Parent=gene-HMPREF3107_03950;Dbxref=NCBI_GP:OFT02561.1;Name=OFT02561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582195.1;locus_tag=HMPREF3107_03950;product=cytochrome C;protein_id=OFT02561.1;transl_table=11 KV790788.1 Genbank gene 9478 10611 . + . ID=gene-HMPREF3107_03955;Name=HMPREF3107_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03955 KV790788.1 Protein Homology CDS 9478 10611 . + 0 ID=cds-OFT02562.1;Parent=gene-HMPREF3107_03955;Dbxref=NCBI_GP:OFT02562.1;Name=OFT02562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756525.1;locus_tag=HMPREF3107_03955;product=anhydro-N-acetylmuramic acid kinase;protein_id=OFT02562.1;transl_table=11 KV790788.1 Genbank gene 10708 13113 . + . ID=gene-HMPREF3107_03960;Name=HMPREF3107_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03960 KV790788.1 Protein Homology CDS 10708 13113 . + 0 ID=cds-OFT02563.1;Parent=gene-HMPREF3107_03960;Dbxref=NCBI_GP:OFT02563.1;Name=OFT02563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427075.1;locus_tag=HMPREF3107_03960;product=cell division protein FtsK;protein_id=OFT02563.1;transl_table=11 KV790788.1 Genbank gene 13169 13702 . + . ID=gene-HMPREF3107_03965;Name=HMPREF3107_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03965 KV790788.1 GeneMarkS+ CDS 13169 13702 . + 0 ID=cds-OFT02564.1;Parent=gene-HMPREF3107_03965;Dbxref=NCBI_GP:OFT02564.1;Name=OFT02564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03965;product=hypothetical protein;protein_id=OFT02564.1;transl_table=11 KV790788.1 Genbank gene 13699 14130 . + . ID=gene-HMPREF3107_03970;Name=HMPREF3107_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03970 KV790788.1 Protein Homology CDS 13699 14130 . + 0 ID=cds-OFT02565.1;Parent=gene-HMPREF3107_03970;Dbxref=NCBI_GP:OFT02565.1;Name=OFT02565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772020.1;locus_tag=HMPREF3107_03970;product=hypothetical protein;protein_id=OFT02565.1;transl_table=11 KV790788.1 Genbank gene 14246 14458 . + . ID=gene-HMPREF3107_03975;Name=HMPREF3107_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03975 KV790788.1 GeneMarkS+ CDS 14246 14458 . + 0 ID=cds-OFT02566.1;Parent=gene-HMPREF3107_03975;Dbxref=NCBI_GP:OFT02566.1;Name=OFT02566.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_03975;product=hypothetical protein;protein_id=OFT02566.1;transl_table=11 KV790788.1 Genbank gene 14504 15514 . + . ID=gene-HMPREF3107_03980;Name=HMPREF3107_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03980 KV790788.1 Protein Homology CDS 14504 15514 . + 0 ID=cds-OFT02567.1;Parent=gene-HMPREF3107_03980;Dbxref=NCBI_GP:OFT02567.1;Name=OFT02567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745958.1;locus_tag=HMPREF3107_03980;product=ferrochelatase;protein_id=OFT02567.1;transl_table=11 KV790788.1 Genbank gene 15587 16825 . - . ID=gene-HMPREF3107_03985;Name=HMPREF3107_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03985 KV790788.1 Protein Homology CDS 15587 16825 . - 0 ID=cds-OFT02568.1;Parent=gene-HMPREF3107_03985;Dbxref=NCBI_GP:OFT02568.1;Name=OFT02568.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284814.1;locus_tag=HMPREF3107_03985;product=isocitrate dehydrogenase (NADP(+));protein_id=OFT02568.1;transl_table=11 KV790788.1 Genbank gene 16988 17308 . + . ID=gene-HMPREF3107_03990;Name=HMPREF3107_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03990 KV790788.1 Protein Homology CDS 16988 17308 . + 0 ID=cds-OFT02569.1;Parent=gene-HMPREF3107_03990;Dbxref=NCBI_GP:OFT02569.1;Name=OFT02569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772032.1;locus_tag=HMPREF3107_03990;product=hypothetical protein;protein_id=OFT02569.1;transl_table=11 KV790788.1 Genbank gene 17607 18989 . + . ID=gene-HMPREF3107_03995;Name=HMPREF3107_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_03995 KV790788.1 Protein Homology CDS 17607 18989 . + 0 ID=cds-OFT02570.1;Parent=gene-HMPREF3107_03995;Dbxref=NCBI_GP:OFT02570.1;Name=OFT02570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003782742.1;locus_tag=HMPREF3107_03995;product=xanthine permease;protein_id=OFT02570.1;transl_table=11 KV790788.1 Genbank gene 19183 19572 . + . ID=gene-HMPREF3107_04000;Name=HMPREF3107_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04000 KV790788.1 Protein Homology CDS 19183 19572 . + 0 ID=cds-OFT02571.1;Parent=gene-HMPREF3107_04000;Dbxref=NCBI_GP:OFT02571.1;Name=OFT02571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686761.1;locus_tag=HMPREF3107_04000;product=endonuclease;protein_id=OFT02571.1;transl_table=11 KV790788.1 Genbank gene 20762 21268 . + . ID=gene-HMPREF3107_04005;Name=HMPREF3107_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04005 KV790788.1 GeneMarkS+ CDS 20762 21268 . + 0 ID=cds-OFT02572.1;Parent=gene-HMPREF3107_04005;Dbxref=NCBI_GP:OFT02572.1;Name=OFT02572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04005;product=hypothetical protein;protein_id=OFT02572.1;transl_table=11 KV790788.1 Genbank gene 21290 24505 . + . ID=gene-HMPREF3107_04010;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HMPREF3107_04010 KV790788.1 Protein Homology CDS 21290 24505 . + 0 ID=cds-OFT02573.1;Parent=gene-HMPREF3107_04010;Dbxref=NCBI_GP:OFT02573.1;Name=OFT02573.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772042.1;locus_tag=HMPREF3107_04010;product=carbamoyl phosphate synthase large subunit;protein_id=OFT02573.1;transl_table=11 KV790788.1 Genbank gene 24755 25354 . - . ID=gene-HMPREF3107_04015;Name=HMPREF3107_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04015 KV790788.1 Protein Homology CDS 24755 25354 . - 0 ID=cds-OFT02574.1;Parent=gene-HMPREF3107_04015;Dbxref=NCBI_GP:OFT02574.1;Name=OFT02574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772046.1;locus_tag=HMPREF3107_04015;product=methyltransferase type 11;protein_id=OFT02574.1;transl_table=11 KV790788.1 Genbank gene 25592 27349 . - . ID=gene-HMPREF3107_04020;Name=HMPREF3107_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04020 KV790788.1 Protein Homology CDS 25592 27349 . - 0 ID=cds-OFT02577.1;Parent=gene-HMPREF3107_04020;Dbxref=NCBI_GP:OFT02577.1;Name=OFT02577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012823183.1;locus_tag=HMPREF3107_04020;product=hypothetical protein;protein_id=OFT02577.1;transl_table=11 KV790788.1 Genbank gene 27458 30085 . - . ID=gene-HMPREF3107_04025;Name=HMPREF3107_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04025 KV790788.1 Protein Homology CDS 27458 30085 . - 0 ID=cds-OFT02575.1;Parent=gene-HMPREF3107_04025;Dbxref=NCBI_GP:OFT02575.1;Name=OFT02575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425894.1;locus_tag=HMPREF3107_04025;product=alanine--tRNA ligase;protein_id=OFT02575.1;transl_table=11 KV790788.1 Genbank gene 30273 31115 . + . ID=gene-HMPREF3107_04030;Name=HMPREF3107_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04030 KV790788.1 Protein Homology CDS 30273 31115 . + 0 ID=cds-OFT02576.1;Parent=gene-HMPREF3107_04030;Dbxref=NCBI_GP:OFT02576.1;Name=OFT02576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519838.1;locus_tag=HMPREF3107_04030;product=competence protein ComJ;protein_id=OFT02576.1;transl_table=11 ##sequence-region KV790789.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790789.1 Genbank region 1 662 . + . ID=KV790789.1:1..662;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 ##sequence-region KV790790.1 1 24897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790790.1 Genbank region 1 24897 . + . ID=KV790790.1:1..24897;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790790.1 Genbank gene 80 643 . - . ID=gene-HMPREF3107_04035;Name=HMPREF3107_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04035 KV790790.1 Protein Homology CDS 80 643 . - 0 ID=cds-OFT02507.1;Parent=gene-HMPREF3107_04035;Dbxref=NCBI_GP:OFT02507.1;Name=OFT02507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311439.1;locus_tag=HMPREF3107_04035;product=hypothetical protein;protein_id=OFT02507.1;transl_table=11 KV790790.1 Genbank gene 849 2744 . + . ID=gene-HMPREF3107_04040;Name=HMPREF3107_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04040 KV790790.1 Protein Homology CDS 849 2744 . + 0 ID=cds-OFT02508.1;Parent=gene-HMPREF3107_04040;Dbxref=NCBI_GP:OFT02508.1;Name=OFT02508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426874.1;locus_tag=HMPREF3107_04040;product=hypothetical protein;protein_id=OFT02508.1;transl_table=11 KV790790.1 Genbank gene 3030 3467 . - . ID=gene-HMPREF3107_04045;Name=HMPREF3107_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04045 KV790790.1 Protein Homology CDS 3030 3467 . - 0 ID=cds-OFT02512.1;Parent=gene-HMPREF3107_04045;Dbxref=NCBI_GP:OFT02512.1;Name=OFT02512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173326.1;locus_tag=HMPREF3107_04045;product=hypothetical protein;protein_id=OFT02512.1;transl_table=11 KV790790.1 Genbank gene 3581 3706 . - . ID=gene-HMPREF3107_04050;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF3107_04050 KV790790.1 Protein Homology CDS 3581 3706 . - 0 ID=cds-OFT02509.1;Parent=gene-HMPREF3107_04050;Dbxref=NCBI_GP:OFT02509.1;Name=OFT02509.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:SwissProt:A9M4E0.1;locus_tag=HMPREF3107_04050;product=50S ribosomal protein L36;protein_id=OFT02509.1;transl_table=11 KV790790.1 Genbank gene 3706 3981 . - . ID=gene-HMPREF3107_04055;Name=HMPREF3107_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04055 KV790790.1 Protein Homology CDS 3706 3981 . - 0 ID=cds-OFT02510.1;Parent=gene-HMPREF3107_04055;Dbxref=NCBI_GP:OFT02510.1;Name=OFT02510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271952.1;locus_tag=HMPREF3107_04055;product=50S ribosomal protein L31;protein_id=OFT02510.1;transl_table=11 KV790790.1 Genbank gene 4161 5186 . + . ID=gene-HMPREF3107_04060;Name=HMPREF3107_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04060 KV790790.1 Protein Homology CDS 4161 5186 . + 0 ID=cds-OFT02513.1;Parent=gene-HMPREF3107_04060;Dbxref=NCBI_GP:OFT02513.1;Name=OFT02513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740704.1;locus_tag=HMPREF3107_04060;product=peptide ABC transporter permease;protein_id=OFT02513.1;transl_table=11 KV790790.1 Genbank gene 5186 6751 . + . ID=gene-HMPREF3107_04065;Name=HMPREF3107_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04065 KV790790.1 Protein Homology CDS 5186 6751 . + 0 ID=cds-OFT02511.1;Parent=gene-HMPREF3107_04065;Dbxref=NCBI_GP:OFT02511.1;Name=OFT02511.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746052.1;locus_tag=HMPREF3107_04065;product=microcin ABC transporter ATP-binding protein;protein_id=OFT02511.1;transl_table=11 KV790790.1 Genbank gene 6974 7762 . - . ID=gene-HMPREF3107_04070;Name=HMPREF3107_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04070 KV790790.1 Protein Homology CDS 6974 7762 . - 0 ID=cds-OFT02439.1;Parent=gene-HMPREF3107_04070;Dbxref=NCBI_GP:OFT02439.1;Name=OFT02439.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285934.1;locus_tag=HMPREF3107_04070;product=spermidine synthase;protein_id=OFT02439.1;transl_table=11 KV790790.1 Genbank gene 7907 9421 . + . ID=gene-HMPREF3107_04075;Name=HMPREF3107_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04075 KV790790.1 Protein Homology CDS 7907 9421 . + 0 ID=cds-OFT02440.1;Parent=gene-HMPREF3107_04075;Dbxref=NCBI_GP:OFT02440.1;Name=OFT02440.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680923.1;locus_tag=HMPREF3107_04075;product=spermidine synthase;protein_id=OFT02440.1;transl_table=11 KV790790.1 Genbank gene 9735 10496 . + . ID=gene-HMPREF3107_04080;Name=HMPREF3107_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04080 KV790790.1 Protein Homology CDS 9735 10496 . + 0 ID=cds-OFT02441.1;Parent=gene-HMPREF3107_04080;Dbxref=NCBI_GP:OFT02441.1;Name=OFT02441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774433.1;locus_tag=HMPREF3107_04080;product=beta-1%2C4-glucosyltransferase;protein_id=OFT02441.1;transl_table=11 KV790790.1 Genbank gene 10498 11307 . + . ID=gene-HMPREF3107_04085;Name=HMPREF3107_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04085 KV790790.1 Protein Homology CDS 10498 11307 . + 0 ID=cds-OFT02442.1;Parent=gene-HMPREF3107_04085;Dbxref=NCBI_GP:OFT02442.1;Name=OFT02442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774435.1;locus_tag=HMPREF3107_04085;product=family 2 glycosyl transferase;protein_id=OFT02442.1;transl_table=11 KV790790.1 Genbank gene 11475 12917 . - . ID=gene-HMPREF3107_04090;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=HMPREF3107_04090 KV790790.1 Protein Homology CDS 11475 12917 . - 0 ID=cds-OFT02443.1;Parent=gene-HMPREF3107_04090;Dbxref=NCBI_GP:OFT02443.1;Name=OFT02443.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282629.1;locus_tag=HMPREF3107_04090;product=succinate-semialdehyde dehydrogenase (NADP(+));protein_id=OFT02443.1;transl_table=11 KV790790.1 Genbank gene 13071 13544 . - . ID=gene-HMPREF3107_04095;Name=HMPREF3107_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04095 KV790790.1 Protein Homology CDS 13071 13544 . - 0 ID=cds-OFT02444.1;Parent=gene-HMPREF3107_04095;Dbxref=NCBI_GP:OFT02444.1;Name=OFT02444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774441.1;locus_tag=HMPREF3107_04095;product=iron-sulfur cluster repair protein;protein_id=OFT02444.1;transl_table=11 KV790790.1 Genbank gene 13687 14034 . - . ID=gene-HMPREF3107_04100;Name=HMPREF3107_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04100 KV790790.1 Protein Homology CDS 13687 14034 . - 0 ID=cds-OFT02445.1;Parent=gene-HMPREF3107_04100;Dbxref=NCBI_GP:OFT02445.1;Name=OFT02445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283376.1;locus_tag=HMPREF3107_04100;product=hypothetical protein;protein_id=OFT02445.1;transl_table=11 KV790790.1 Genbank gene 14060 14920 . - . ID=gene-HMPREF3107_04105;Name=HMPREF3107_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04105 KV790790.1 Protein Homology CDS 14060 14920 . - 0 ID=cds-OFT02446.1;Parent=gene-HMPREF3107_04105;Dbxref=NCBI_GP:OFT02446.1;Name=OFT02446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116918.1;locus_tag=HMPREF3107_04105;product=hypothetical protein;protein_id=OFT02446.1;transl_table=11 KV790790.1 Genbank gene 15200 15559 . + . ID=gene-HMPREF3107_04110;Name=HMPREF3107_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04110 KV790790.1 Protein Homology CDS 15200 15559 . + 0 ID=cds-OFT02447.1;Parent=gene-HMPREF3107_04110;Dbxref=NCBI_GP:OFT02447.1;Name=OFT02447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251194.1;locus_tag=HMPREF3107_04110;product=hypothetical protein;protein_id=OFT02447.1;transl_table=11 KV790790.1 Genbank gene 15564 15998 . + . ID=gene-HMPREF3107_04115;Name=HMPREF3107_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04115 KV790790.1 Protein Homology CDS 15564 15998 . + 0 ID=cds-OFT02448.1;Parent=gene-HMPREF3107_04115;Dbxref=NCBI_GP:OFT02448.1;Name=OFT02448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425077.1;locus_tag=HMPREF3107_04115;product=hypothetical protein;protein_id=OFT02448.1;transl_table=11 KV790790.1 Genbank gene 15995 17071 . + . ID=gene-HMPREF3107_04120;Name=HMPREF3107_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04120 KV790790.1 Protein Homology CDS 15995 17071 . + 0 ID=cds-OFT02449.1;Parent=gene-HMPREF3107_04120;Dbxref=NCBI_GP:OFT02449.1;Name=OFT02449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312226.1;locus_tag=HMPREF3107_04120;product=lytic murein transglycosylase B;protein_id=OFT02449.1;transl_table=11 KV790790.1 Genbank gene 17188 18087 . - . ID=gene-HMPREF3107_04125;Name=HMPREF3107_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04125 KV790790.1 Protein Homology CDS 17188 18087 . - 0 ID=cds-OFT02450.1;Parent=gene-HMPREF3107_04125;Dbxref=NCBI_GP:OFT02450.1;Name=OFT02450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269974.1;locus_tag=HMPREF3107_04125;product=peroxidase;protein_id=OFT02450.1;transl_table=11 KV790790.1 Genbank gene 18172 19863 . - . ID=gene-HMPREF3107_04130;Name=HMPREF3107_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04130 KV790790.1 Protein Homology CDS 18172 19863 . - 0 ID=cds-OFT02451.1;Parent=gene-HMPREF3107_04130;Dbxref=NCBI_GP:OFT02451.1;Name=OFT02451.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688490.1;locus_tag=HMPREF3107_04130;product=D-lactate dehydrogenase;protein_id=OFT02451.1;transl_table=11 KV790790.1 Genbank gene 20337 21014 . + . ID=gene-HMPREF3107_04135;Name=HMPREF3107_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04135 KV790790.1 Protein Homology CDS 20337 21014 . + 0 ID=cds-OFT02452.1;Parent=gene-HMPREF3107_04135;Dbxref=NCBI_GP:OFT02452.1;Name=OFT02452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684348.1;locus_tag=HMPREF3107_04135;product=DNA-binding response regulator;protein_id=OFT02452.1;transl_table=11 KV790790.1 Genbank gene 21034 22437 . + . ID=gene-HMPREF3107_04140;Name=HMPREF3107_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04140 KV790790.1 Protein Homology CDS 21034 22437 . + 0 ID=cds-OFT02453.1;Parent=gene-HMPREF3107_04140;Dbxref=NCBI_GP:OFT02453.1;Name=OFT02453.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774464.1;locus_tag=HMPREF3107_04140;product=two-component sensor histidine kinase;protein_id=OFT02453.1;transl_table=11 KV790790.1 Genbank gene 22692 24797 . + . ID=gene-HMPREF3107_04145;Name=HMPREF3107_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04145 KV790790.1 Protein Homology CDS 22692 24797 . + 0 ID=cds-OFT02454.1;Parent=gene-HMPREF3107_04145;Dbxref=NCBI_GP:OFT02454.1;Name=OFT02454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426338.1;locus_tag=HMPREF3107_04145;product=polyribonucleotide nucleotidyltransferase;protein_id=OFT02454.1;transl_table=11 ##sequence-region KV790791.1 1 3516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790791.1 Genbank region 1 3516 . + . ID=KV790791.1:1..3516;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790791.1 Genbank gene 116 562 . - . ID=gene-HMPREF3107_04150;Name=HMPREF3107_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04150 KV790791.1 Protein Homology CDS 116 562 . - 0 ID=cds-OFT02409.1;Parent=gene-HMPREF3107_04150;Dbxref=NCBI_GP:OFT02409.1;Name=OFT02409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312024.1;locus_tag=HMPREF3107_04150;product=phage tail protein;protein_id=OFT02409.1;transl_table=11 KV790791.1 Genbank gene 678 3263 . - . ID=gene-HMPREF3107_04155;Name=HMPREF3107_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04155 KV790791.1 Protein Homology CDS 678 3263 . - 0 ID=cds-OFT02410.1;Parent=gene-HMPREF3107_04155;Dbxref=NCBI_GP:OFT02410.1;Name=OFT02410.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761010.1;locus_tag=HMPREF3107_04155;product=DNA mismatch repair protein MutS;protein_id=OFT02410.1;transl_table=11 ##sequence-region KV790792.1 1 41879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790792.1 Genbank region 1 41879 . + . ID=KV790792.1:1..41879;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790792.1 Genbank gene 19 642 . + . ID=gene-HMPREF3107_04160;Name=HMPREF3107_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04160 KV790792.1 Protein Homology CDS 19 642 . + 0 ID=cds-OFT02371.1;Parent=gene-HMPREF3107_04160;Dbxref=NCBI_GP:OFT02371.1;Name=OFT02371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115509.1;locus_tag=HMPREF3107_04160;product=FMN-dependent NADH-azoreductase;protein_id=OFT02371.1;transl_table=11 KV790792.1 Genbank gene 849 945 . - . ID=gene-HMPREF3107_04165;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=HMPREF3107_04165 KV790792.1 cmsearch SRP_RNA 849 945 . - . ID=rna-HMPREF3107_04165;Parent=gene-HMPREF3107_04165;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_04165;product=signal recognition particle sRNA small type KV790792.1 cmsearch exon 849 945 . - . ID=exon-HMPREF3107_04165-1;Parent=rna-HMPREF3107_04165;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_04165;product=signal recognition particle sRNA small type KV790792.1 Genbank gene 1169 4999 . + . ID=gene-HMPREF3107_04170;Name=HMPREF3107_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04170 KV790792.1 Protein Homology CDS 1169 4999 . + 0 ID=cds-OFT02388.1;Parent=gene-HMPREF3107_04170;Dbxref=NCBI_GP:OFT02388.1;Name=OFT02388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951146.1;locus_tag=HMPREF3107_04170;product=FAD-linked oxidase;protein_id=OFT02388.1;transl_table=11 KV790792.1 Genbank gene 5538 6263 . + . ID=gene-HMPREF3107_04175;Name=HMPREF3107_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04175 KV790792.1 Protein Homology CDS 5538 6263 . + 0 ID=cds-OFT02372.1;Parent=gene-HMPREF3107_04175;Dbxref=NCBI_GP:OFT02372.1;Name=OFT02372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772155.1;locus_tag=HMPREF3107_04175;product=phosphoadenosine phosphosulfate reductase;protein_id=OFT02372.1;transl_table=11 KV790792.1 Genbank gene 6342 7049 . + . ID=gene-HMPREF3107_04180;Name=HMPREF3107_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04180 KV790792.1 Protein Homology CDS 6342 7049 . + 0 ID=cds-OFT02373.1;Parent=gene-HMPREF3107_04180;Dbxref=NCBI_GP:OFT02373.1;Name=OFT02373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173568.1;locus_tag=HMPREF3107_04180;product=DNA-binding protein;protein_id=OFT02373.1;transl_table=11 KV790792.1 Genbank gene 7071 7310 . - . ID=gene-HMPREF3107_04185;Name=HMPREF3107_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04185 KV790792.1 Protein Homology CDS 7071 7310 . - 0 ID=cds-OFT02374.1;Parent=gene-HMPREF3107_04185;Dbxref=NCBI_GP:OFT02374.1;Name=OFT02374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753302.1;locus_tag=HMPREF3107_04185;product=hypothetical protein;protein_id=OFT02374.1;transl_table=11 KV790792.1 Genbank gene 7400 8053 . + . ID=gene-HMPREF3107_04190;Name=HMPREF3107_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04190 KV790792.1 Protein Homology CDS 7400 8053 . + 0 ID=cds-OFT02375.1;Parent=gene-HMPREF3107_04190;Dbxref=NCBI_GP:OFT02375.1;Name=OFT02375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173569.1;locus_tag=HMPREF3107_04190;product=glutathione S-transferase;protein_id=OFT02375.1;transl_table=11 KV790792.1 Genbank gene 8252 9961 . + . ID=gene-HMPREF3107_04195;Name=HMPREF3107_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04195 KV790792.1 Protein Homology CDS 8252 9961 . + 0 ID=cds-OFT02389.1;Parent=gene-HMPREF3107_04195;Dbxref=NCBI_GP:OFT02389.1;Name=OFT02389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758806.1;locus_tag=HMPREF3107_04195;product=molecular chaperone HscC;protein_id=OFT02389.1;transl_table=11 KV790792.1 Genbank gene 10044 10508 . + . ID=gene-HMPREF3107_04200;Name=HMPREF3107_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04200 KV790792.1 Protein Homology CDS 10044 10508 . + 0 ID=cds-OFT02376.1;Parent=gene-HMPREF3107_04200;Dbxref=NCBI_GP:OFT02376.1;Name=OFT02376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343589.1;locus_tag=HMPREF3107_04200;product=hypothetical protein;protein_id=OFT02376.1;transl_table=11 KV790792.1 Genbank gene 10588 10767 . - . ID=gene-HMPREF3107_04205;Name=HMPREF3107_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04205 KV790792.1 Protein Homology CDS 10588 10767 . - 0 ID=cds-OFT02390.1;Parent=gene-HMPREF3107_04205;Dbxref=NCBI_GP:OFT02390.1;Name=OFT02390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343590.1;locus_tag=HMPREF3107_04205;product=hypothetical protein;protein_id=OFT02390.1;transl_table=11 KV790792.1 Genbank gene 10851 11987 . + . ID=gene-HMPREF3107_04210;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=HMPREF3107_04210 KV790792.1 Protein Homology CDS 10851 11987 . + 0 ID=cds-OFT02377.1;Parent=gene-HMPREF3107_04210;Dbxref=NCBI_GP:OFT02377.1;Name=OFT02377.1;Note=Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine;gbkey=CDS;gene=metX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759892.1;locus_tag=HMPREF3107_04210;product=homoserine O-acetyltransferase;protein_id=OFT02377.1;transl_table=11 KV790792.1 Genbank gene 11984 12568 . + . ID=gene-HMPREF3107_04215;Name=HMPREF3107_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04215 KV790792.1 Protein Homology CDS 11984 12568 . + 0 ID=cds-OFT02378.1;Parent=gene-HMPREF3107_04215;Dbxref=NCBI_GP:OFT02378.1;Name=OFT02378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283415.1;locus_tag=HMPREF3107_04215;product=methionine biosynthesis protein MetW;protein_id=OFT02378.1;transl_table=11 KV790792.1 Genbank gene 12650 14746 . + . ID=gene-HMPREF3107_04220;Name=HMPREF3107_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04220 KV790792.1 Protein Homology CDS 12650 14746 . + 0 ID=cds-OFT02379.1;Parent=gene-HMPREF3107_04220;Dbxref=NCBI_GP:OFT02379.1;Name=OFT02379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286107.1;locus_tag=HMPREF3107_04220;product=hypothetical protein;protein_id=OFT02379.1;transl_table=11 KV790792.1 Genbank gene 14818 15153 . + . ID=gene-HMPREF3107_04225;Name=HMPREF3107_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04225 KV790792.1 Protein Homology CDS 14818 15153 . + 0 ID=cds-OFT02380.1;Parent=gene-HMPREF3107_04225;Dbxref=NCBI_GP:OFT02380.1;Name=OFT02380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425350.1;locus_tag=HMPREF3107_04225;product=nucleoid-associated protein;protein_id=OFT02380.1;transl_table=11 KV790792.1 Genbank gene 15408 15935 . + . ID=gene-HMPREF3107_04230;Name=HMPREF3107_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04230 KV790792.1 Protein Homology CDS 15408 15935 . + 0 ID=cds-OFT02381.1;Parent=gene-HMPREF3107_04230;Dbxref=NCBI_GP:OFT02381.1;Name=OFT02381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342654.1;locus_tag=HMPREF3107_04230;product=beta-hydroxydecanoyl-ACP dehydratase;protein_id=OFT02381.1;transl_table=11 KV790792.1 Genbank gene 16003 17217 . + . ID=gene-HMPREF3107_04235;Name=HMPREF3107_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04235 KV790792.1 Protein Homology CDS 16003 17217 . + 0 ID=cds-OFT02382.1;Parent=gene-HMPREF3107_04235;Dbxref=NCBI_GP:OFT02382.1;Name=OFT02382.1;Note=FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173547.1;locus_tag=HMPREF3107_04235;product=beta-ketoacyl-[acyl-carrier-protein] synthase I;protein_id=OFT02382.1;transl_table=11 KV790792.1 Genbank gene 17357 18709 . - . ID=gene-HMPREF3107_04240;Name=HMPREF3107_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04240 KV790792.1 Protein Homology CDS 17357 18709 . - 0 ID=cds-OFT02383.1;Parent=gene-HMPREF3107_04240;Dbxref=NCBI_GP:OFT02383.1;Name=OFT02383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116364.1;locus_tag=HMPREF3107_04240;product=exodeoxyribonuclease VII large subunit;protein_id=OFT02383.1;transl_table=11 KV790792.1 Genbank gene 19115 20719 . + . ID=gene-HMPREF3107_04245;Name=HMPREF3107_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04245 KV790792.1 Protein Homology CDS 19115 20719 . + 0 ID=cds-OFT02384.1;Parent=gene-HMPREF3107_04245;Dbxref=NCBI_GP:OFT02384.1;Name=OFT02384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342797.1;locus_tag=HMPREF3107_04245;product=twin-arginine translocation pathway signal;protein_id=OFT02384.1;transl_table=11 KV790792.1 Genbank gene 20788 21096 . + . ID=gene-HMPREF3107_04250;Name=HMPREF3107_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04250 KV790792.1 Protein Homology CDS 20788 21096 . + 0 ID=cds-OFT02385.1;Parent=gene-HMPREF3107_04250;Dbxref=NCBI_GP:OFT02385.1;Name=OFT02385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342796.1;locus_tag=HMPREF3107_04250;product=hypothetical protein;protein_id=OFT02385.1;transl_table=11 KV790792.1 Genbank gene 21375 23816 . - . ID=gene-HMPREF3107_04255;Name=HMPREF3107_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04255 KV790792.1 Protein Homology CDS 21375 23816 . - 0 ID=cds-OFT02386.1;Parent=gene-HMPREF3107_04255;Dbxref=NCBI_GP:OFT02386.1;Name=OFT02386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116704.1;locus_tag=HMPREF3107_04255;product=ribonuclease R;protein_id=OFT02386.1;transl_table=11 KV790792.1 Genbank gene 23914 24000 . + . ID=gene-HMPREF3107_04260;Name=HMPREF3107_04260;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04260 KV790792.1 tRNAscan-SE tRNA 23914 24000 . + . ID=rna-HMPREF3107_04260;Parent=gene-HMPREF3107_04260;anticodon=(pos:23948..23950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04260;product=tRNA-Leu KV790792.1 tRNAscan-SE exon 23914 24000 . + . ID=exon-HMPREF3107_04260-1;Parent=rna-HMPREF3107_04260;anticodon=(pos:23948..23950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04260;product=tRNA-Leu KV790792.1 Genbank gene 24029 24115 . + . ID=gene-HMPREF3107_04265;Name=HMPREF3107_04265;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04265 KV790792.1 tRNAscan-SE tRNA 24029 24115 . + . ID=rna-HMPREF3107_04265;Parent=gene-HMPREF3107_04265;anticodon=(pos:24063..24065);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04265;product=tRNA-Leu KV790792.1 tRNAscan-SE exon 24029 24115 . + . ID=exon-HMPREF3107_04265-1;Parent=rna-HMPREF3107_04265;anticodon=(pos:24063..24065);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04265;product=tRNA-Leu KV790792.1 Genbank gene 24224 24646 . - . ID=gene-HMPREF3107_04270;Name=HMPREF3107_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04270 KV790792.1 Protein Homology CDS 24224 24646 . - 0 ID=cds-OFT02391.1;Parent=gene-HMPREF3107_04270;Dbxref=NCBI_GP:OFT02391.1;Name=OFT02391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426685.1;locus_tag=HMPREF3107_04270;product=ester cyclase;protein_id=OFT02391.1;transl_table=11 KV790792.1 Genbank gene 25105 26847 . + . ID=gene-HMPREF3107_04275;Name=HMPREF3107_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04275 KV790792.1 Protein Homology CDS 25105 26847 . + 0 ID=cds-OFT02387.1;Parent=gene-HMPREF3107_04275;Dbxref=NCBI_GP:OFT02387.1;Name=OFT02387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824866.1;locus_tag=HMPREF3107_04275;product=hypothetical protein;protein_id=OFT02387.1;transl_table=11 KV790792.1 Genbank gene 27127 27948 . - . ID=gene-HMPREF3107_04280;Name=HMPREF3107_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04280 KV790792.1 Protein Homology CDS 27127 27948 . - 0 ID=cds-OFT02335.1;Parent=gene-HMPREF3107_04280;Dbxref=NCBI_GP:OFT02335.1;Name=OFT02335.1;Note=catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772088.1;locus_tag=HMPREF3107_04280;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=OFT02335.1;transl_table=11 KV790792.1 Genbank gene 27984 28616 . - . ID=gene-HMPREF3107_04285;Name=HMPREF3107_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04285 KV790792.1 Protein Homology CDS 27984 28616 . - 0 ID=cds-OFT02336.1;Parent=gene-HMPREF3107_04285;Dbxref=NCBI_GP:OFT02336.1;Name=OFT02336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449040.1;locus_tag=HMPREF3107_04285;product=pyridoxamine 5'-phosphate oxidase;protein_id=OFT02336.1;transl_table=11 KV790792.1 Genbank gene 28705 29511 . - . ID=gene-HMPREF3107_04290;Name=HMPREF3107_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04290 KV790792.1 Protein Homology CDS 28705 29511 . - 0 ID=cds-OFT02337.1;Parent=gene-HMPREF3107_04290;Dbxref=NCBI_GP:OFT02337.1;Name=OFT02337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343543.1;locus_tag=HMPREF3107_04290;product=competence protein ComL;protein_id=OFT02337.1;transl_table=11 KV790792.1 Genbank gene 29510 30628 . + . ID=gene-HMPREF3107_04295;Name=HMPREF3107_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04295 KV790792.1 Protein Homology CDS 29510 30628 . + 0 ID=cds-OFT02338.1;Parent=gene-HMPREF3107_04295;Dbxref=NCBI_GP:OFT02338.1;Name=OFT02338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258136.1;locus_tag=HMPREF3107_04295;product=RNA pseudouridine synthase;protein_id=OFT02338.1;transl_table=11 KV790792.1 Genbank gene 30841 32352 . - . ID=gene-HMPREF3107_04300;Name=HMPREF3107_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04300 KV790792.1 Protein Homology CDS 30841 32352 . - 0 ID=cds-OFT02339.1;Parent=gene-HMPREF3107_04300;Dbxref=NCBI_GP:OFT02339.1;Name=OFT02339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772081.1;locus_tag=HMPREF3107_04300;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=OFT02339.1;transl_table=11 KV790792.1 Genbank gene 32544 32975 . + . ID=gene-HMPREF3107_04305;Name=HMPREF3107_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04305 KV790792.1 Protein Homology CDS 32544 32975 . + 0 ID=cds-OFT02340.1;Parent=gene-HMPREF3107_04305;Dbxref=NCBI_GP:OFT02340.1;Name=OFT02340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683578.1;locus_tag=HMPREF3107_04305;product=hypothetical protein;protein_id=OFT02340.1;transl_table=11 KV790792.1 Genbank gene 33073 33531 . + . ID=gene-HMPREF3107_04310;Name=HMPREF3107_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04310 KV790792.1 GeneMarkS+ CDS 33073 33531 . + 0 ID=cds-OFT02341.1;Parent=gene-HMPREF3107_04310;Dbxref=NCBI_GP:OFT02341.1;Name=OFT02341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04310;product=hypothetical protein;protein_id=OFT02341.1;transl_table=11 KV790792.1 Genbank gene 33619 35271 . + . ID=gene-HMPREF3107_04315;Name=HMPREF3107_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04315 KV790792.1 Protein Homology CDS 33619 35271 . + 0 ID=cds-OFT02342.1;Parent=gene-HMPREF3107_04315;Dbxref=NCBI_GP:OFT02342.1;Name=OFT02342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002236772.1;locus_tag=HMPREF3107_04315;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=OFT02342.1;transl_table=11 KV790792.1 Genbank gene 35333 36148 . - . ID=gene-HMPREF3107_04320;Name=HMPREF3107_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04320 KV790792.1 Protein Homology CDS 35333 36148 . - 0 ID=cds-OFT02343.1;Parent=gene-HMPREF3107_04320;Dbxref=NCBI_GP:OFT02343.1;Name=OFT02343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772073.1;locus_tag=HMPREF3107_04320;product=undecaprenyl-diphosphatase;protein_id=OFT02343.1;transl_table=11 KV790792.1 Genbank gene 36335 37330 . + . ID=gene-HMPREF3107_04325;Name=HMPREF3107_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04325 KV790792.1 Protein Homology CDS 36335 37330 . + 0 ID=cds-OFT02344.1;Parent=gene-HMPREF3107_04325;Dbxref=NCBI_GP:OFT02344.1;Name=OFT02344.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772071.1;locus_tag=HMPREF3107_04325;product=ornithine carbamoyltransferase;protein_id=OFT02344.1;transl_table=11 KV790792.1 Genbank gene 37421 37873 . - . ID=gene-HMPREF3107_04330;Name=HMPREF3107_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04330 KV790792.1 Protein Homology CDS 37421 37873 . - 0 ID=cds-OFT02349.1;Parent=gene-HMPREF3107_04330;Dbxref=NCBI_GP:OFT02349.1;Name=OFT02349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674647.1;locus_tag=HMPREF3107_04330;product=crossover junction endodeoxyribonuclease RuvA;protein_id=OFT02349.1;transl_table=11 KV790792.1 Genbank gene 37878 38429 . - . ID=gene-HMPREF3107_04335;Name=HMPREF3107_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04335 KV790792.1 Protein Homology CDS 37878 38429 . - 0 ID=cds-OFT02345.1;Parent=gene-HMPREF3107_04335;Dbxref=NCBI_GP:OFT02345.1;Name=OFT02345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285110.1;locus_tag=HMPREF3107_04335;product=hypothetical protein;protein_id=OFT02345.1;transl_table=11 KV790792.1 Genbank gene 38620 39345 . + . ID=gene-HMPREF3107_04340;Name=HMPREF3107_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04340 KV790792.1 Protein Homology CDS 38620 39345 . + 0 ID=cds-OFT02346.1;Parent=gene-HMPREF3107_04340;Dbxref=NCBI_GP:OFT02346.1;Name=OFT02346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118596.1;locus_tag=HMPREF3107_04340;product=hypothetical protein;protein_id=OFT02346.1;transl_table=11 KV790792.1 Genbank gene 39431 40132 . + . ID=gene-HMPREF3107_04345;Name=HMPREF3107_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04345 KV790792.1 Protein Homology CDS 39431 40132 . + 0 ID=cds-OFT02347.1;Parent=gene-HMPREF3107_04345;Dbxref=NCBI_GP:OFT02347.1;Name=OFT02347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772061.1;locus_tag=HMPREF3107_04345;product=hypothetical protein;protein_id=OFT02347.1;transl_table=11 KV790792.1 Genbank gene 40215 41639 . + . ID=gene-HMPREF3107_04350;Name=HMPREF3107_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04350 KV790792.1 Protein Homology CDS 40215 41639 . + 0 ID=cds-OFT02348.1;Parent=gene-HMPREF3107_04350;Dbxref=NCBI_GP:OFT02348.1;Name=OFT02348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772060.1;locus_tag=HMPREF3107_04350;product=cardiolipin synthase B;protein_id=OFT02348.1;transl_table=11 ##sequence-region KV790793.1 1 142623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790793.1 Genbank region 1 142623 . + . ID=KV790793.1:1..142623;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790793.1 Genbank gene 84 1664 . - . ID=gene-HMPREF3107_04355;Name=HMPREF3107_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04355 KV790793.1 Protein Homology CDS 84 1664 . - 0 ID=cds-OFT02283.1;Parent=gene-HMPREF3107_04355;Dbxref=NCBI_GP:OFT02283.1;Name=OFT02283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773756.1;locus_tag=HMPREF3107_04355;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=OFT02283.1;transl_table=11 KV790793.1 Genbank gene 1896 2723 . + . ID=gene-HMPREF3107_04360;Name=HMPREF3107_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04360 KV790793.1 GeneMarkS+ CDS 1896 2723 . + 0 ID=cds-OFT02284.1;Parent=gene-HMPREF3107_04360;Dbxref=NCBI_GP:OFT02284.1;Name=OFT02284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04360;product=hypothetical protein;protein_id=OFT02284.1;transl_table=11 KV790793.1 Genbank gene 2880 4286 . + . ID=gene-HMPREF3107_04365;Name=HMPREF3107_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04365 KV790793.1 Protein Homology CDS 2880 4286 . + 0 ID=cds-OFT02285.1;Parent=gene-HMPREF3107_04365;Dbxref=NCBI_GP:OFT02285.1;Name=OFT02285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773762.1;locus_tag=HMPREF3107_04365;product=hypothetical protein;protein_id=OFT02285.1;transl_table=11 KV790793.1 Genbank gene 4286 5452 . + . ID=gene-HMPREF3107_04370;Name=HMPREF3107_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04370 KV790793.1 Protein Homology CDS 4286 5452 . + 0 ID=cds-OFT02286.1;Parent=gene-HMPREF3107_04370;Dbxref=NCBI_GP:OFT02286.1;Name=OFT02286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271049.1;locus_tag=HMPREF3107_04370;product=glycosyl transferase;protein_id=OFT02286.1;transl_table=11 KV790793.1 Genbank gene 5603 6391 . + . ID=gene-HMPREF3107_04375;Name=HMPREF3107_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04375 KV790793.1 Protein Homology CDS 5603 6391 . + 0 ID=cds-OFT02323.1;Parent=gene-HMPREF3107_04375;Dbxref=NCBI_GP:OFT02323.1;Name=OFT02323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004157898.1;locus_tag=HMPREF3107_04375;product=hypothetical protein;protein_id=OFT02323.1;transl_table=11 KV790793.1 Genbank gene 6632 7969 . + . ID=gene-HMPREF3107_04380;Name=HMPREF3107_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04380 KV790793.1 Protein Homology CDS 6632 7969 . + 0 ID=cds-OFT02287.1;Parent=gene-HMPREF3107_04380;Dbxref=NCBI_GP:OFT02287.1;Name=OFT02287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773769.1;locus_tag=HMPREF3107_04380;product=transporter;protein_id=OFT02287.1;transl_table=11 KV790793.1 Genbank gene 8048 8851 . - . ID=gene-HMPREF3107_04385;Name=HMPREF3107_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04385 KV790793.1 Protein Homology CDS 8048 8851 . - 0 ID=cds-OFT02288.1;Parent=gene-HMPREF3107_04385;Dbxref=NCBI_GP:OFT02288.1;Name=OFT02288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767744.1;locus_tag=HMPREF3107_04385;product=thiol:disulfide interchange protein;protein_id=OFT02288.1;transl_table=11 KV790793.1 Genbank gene 9013 9807 . + . ID=gene-HMPREF3107_04390;Name=HMPREF3107_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04390 KV790793.1 Protein Homology CDS 9013 9807 . + 0 ID=cds-OFT02289.1;Parent=gene-HMPREF3107_04390;Dbxref=NCBI_GP:OFT02289.1;Name=OFT02289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773773.1;locus_tag=HMPREF3107_04390;product=3'-5' exonuclease;protein_id=OFT02289.1;transl_table=11 KV790793.1 Genbank gene 9995 10813 . + . ID=gene-HMPREF3107_04395;Name=HMPREF3107_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04395 KV790793.1 Protein Homology CDS 9995 10813 . + 0 ID=cds-OFT02290.1;Parent=gene-HMPREF3107_04395;Dbxref=NCBI_GP:OFT02290.1;Name=OFT02290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773776.1;locus_tag=HMPREF3107_04395;product=hypothetical protein;protein_id=OFT02290.1;transl_table=11 KV790793.1 Genbank gene 10888 11718 . - . ID=gene-HMPREF3107_04400;Name=HMPREF3107_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04400 KV790793.1 Protein Homology CDS 10888 11718 . - 0 ID=cds-OFT02291.1;Parent=gene-HMPREF3107_04400;Dbxref=NCBI_GP:OFT02291.1;Name=OFT02291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283906.1;locus_tag=HMPREF3107_04400;product=magnesium/cobalt efflux protein;protein_id=OFT02291.1;transl_table=11 KV790793.1 Genbank gene 11718 12236 . - . ID=gene-HMPREF3107_04405;Name=HMPREF3107_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04405 KV790793.1 Protein Homology CDS 11718 12236 . - 0 ID=cds-OFT02292.1;Parent=gene-HMPREF3107_04405;Dbxref=NCBI_GP:OFT02292.1;Name=OFT02292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773778.1;locus_tag=HMPREF3107_04405;product=rRNA maturation factor;protein_id=OFT02292.1;transl_table=11 KV790793.1 Genbank gene 12324 12983 . - . ID=gene-HMPREF3107_04410;Name=HMPREF3107_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04410 KV790793.1 Protein Homology CDS 12324 12983 . - 0 ID=cds-OFT02324.1;Parent=gene-HMPREF3107_04410;Dbxref=NCBI_GP:OFT02324.1;Name=OFT02324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285265.1;locus_tag=HMPREF3107_04410;product=uracil-DNA glycosylase;protein_id=OFT02324.1;transl_table=11 KV790793.1 Genbank gene 13059 14063 . - . ID=gene-HMPREF3107_04415;Name=HMPREF3107_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04415 KV790793.1 Protein Homology CDS 13059 14063 . - 0 ID=cds-OFT02293.1;Parent=gene-HMPREF3107_04415;Dbxref=NCBI_GP:OFT02293.1;Name=OFT02293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773782.1;locus_tag=HMPREF3107_04415;product=hypothetical protein;protein_id=OFT02293.1;transl_table=11 KV790793.1 Genbank gene 14365 14955 . - . ID=gene-HMPREF3107_04420;Name=HMPREF3107_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04420 KV790793.1 Protein Homology CDS 14365 14955 . - 0 ID=cds-OFT02294.1;Parent=gene-HMPREF3107_04420;Dbxref=NCBI_GP:OFT02294.1;Name=OFT02294.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762923.1;locus_tag=HMPREF3107_04420;product=hypothetical protein;protein_id=OFT02294.1;transl_table=11 KV790793.1 Genbank gene 14952 15398 . - . ID=gene-HMPREF3107_04425;Name=HMPREF3107_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04425 KV790793.1 GeneMarkS+ CDS 14952 15398 . - 0 ID=cds-OFT02295.1;Parent=gene-HMPREF3107_04425;Dbxref=NCBI_GP:OFT02295.1;Name=OFT02295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04425;product=hypothetical protein;protein_id=OFT02295.1;transl_table=11 KV790793.1 Genbank gene 15606 16667 . - . ID=gene-HMPREF3107_04430;Name=HMPREF3107_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04430 KV790793.1 Protein Homology CDS 15606 16667 . - 0 ID=cds-OFT02296.1;Parent=gene-HMPREF3107_04430;Dbxref=NCBI_GP:OFT02296.1;Name=OFT02296.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773791.1;locus_tag=HMPREF3107_04430;product=uroporphyrinogen decarboxylase;protein_id=OFT02296.1;transl_table=11 KV790793.1 Genbank gene 16828 17685 . + . ID=gene-HMPREF3107_04435;Name=HMPREF3107_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04435 KV790793.1 Protein Homology CDS 16828 17685 . + 0 ID=cds-OFT02297.1;Parent=gene-HMPREF3107_04435;Dbxref=NCBI_GP:OFT02297.1;Name=OFT02297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773793.1;locus_tag=HMPREF3107_04435;product=prolipoprotein diacylglyceryl transferase;protein_id=OFT02297.1;transl_table=11 KV790793.1 Genbank gene 17783 17859 . + . ID=gene-HMPREF3107_04440;Name=HMPREF3107_04440;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04440 KV790793.1 tRNAscan-SE tRNA 17783 17859 . + . ID=rna-HMPREF3107_04440;Parent=gene-HMPREF3107_04440;anticodon=(pos:17817..17819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04440;product=tRNA-Val KV790793.1 tRNAscan-SE exon 17783 17859 . + . ID=exon-HMPREF3107_04440-1;Parent=rna-HMPREF3107_04440;anticodon=(pos:17817..17819);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04440;product=tRNA-Val KV790793.1 Genbank gene 17914 19827 . + . ID=gene-HMPREF3107_04445;Name=HMPREF3107_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04445 KV790793.1 Protein Homology CDS 17914 19827 . + 0 ID=cds-OFT02325.1;Parent=gene-HMPREF3107_04445;Dbxref=NCBI_GP:OFT02325.1;Name=OFT02325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312109.1;locus_tag=HMPREF3107_04445;product=threonine--tRNA ligase;protein_id=OFT02325.1;transl_table=11 KV790793.1 Genbank gene 19962 20366 . + . ID=gene-HMPREF3107_04450;Name=HMPREF3107_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04450 KV790793.1 Protein Homology CDS 19962 20366 . + 0 ID=cds-OFT02298.1;Parent=gene-HMPREF3107_04450;Dbxref=NCBI_GP:OFT02298.1;Name=OFT02298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214107.1;locus_tag=HMPREF3107_04450;product=translation initiation factor IF-3;protein_id=OFT02298.1;transl_table=11 KV790793.1 Genbank gene 20513 20710 . + . ID=gene-HMPREF3107_04455;Name=HMPREF3107_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04455 KV790793.1 Protein Homology CDS 20513 20710 . + 0 ID=cds-OFT02299.1;Parent=gene-HMPREF3107_04455;Dbxref=NCBI_GP:OFT02299.1;Name=OFT02299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641005.1;locus_tag=HMPREF3107_04455;product=50S ribosomal protein L35;protein_id=OFT02299.1;transl_table=11 KV790793.1 Genbank gene 20723 21082 . + . ID=gene-HMPREF3107_04460;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF3107_04460 KV790793.1 Protein Homology CDS 20723 21082 . + 0 ID=cds-OFT02300.1;Parent=gene-HMPREF3107_04460;Dbxref=NCBI_GP:OFT02300.1;Name=OFT02300.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K093.1;locus_tag=HMPREF3107_04460;product=50S ribosomal protein L20;protein_id=OFT02300.1;transl_table=11 KV790793.1 Genbank gene 21331 22323 . + . ID=gene-HMPREF3107_04465;Name=HMPREF3107_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04465 KV790793.1 Protein Homology CDS 21331 22323 . + 0 ID=cds-OFT02301.1;Parent=gene-HMPREF3107_04465;Dbxref=NCBI_GP:OFT02301.1;Name=OFT02301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744233.1;locus_tag=HMPREF3107_04465;product=phenylalanine--tRNA ligase subunit alpha;protein_id=OFT02301.1;transl_table=11 KV790793.1 Genbank gene 22494 24857 . + . ID=gene-HMPREF3107_04470;Name=HMPREF3107_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04470 KV790793.1 Protein Homology CDS 22494 24857 . + 0 ID=cds-OFT02302.1;Parent=gene-HMPREF3107_04470;Dbxref=NCBI_GP:OFT02302.1;Name=OFT02302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F9T6.1;locus_tag=HMPREF3107_04470;product=phenylalanine--tRNA ligase subunit beta;protein_id=OFT02302.1;transl_table=11 KV790793.1 Genbank gene 25005 25313 . + . ID=gene-HMPREF3107_04475;Name=HMPREF3107_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04475 KV790793.1 Protein Homology CDS 25005 25313 . + 0 ID=cds-OFT02303.1;Parent=gene-HMPREF3107_04475;Dbxref=NCBI_GP:OFT02303.1;Name=OFT02303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003788688.1;locus_tag=HMPREF3107_04475;product=integration host factor subunit alpha;protein_id=OFT02303.1;transl_table=11 KV790793.1 Genbank gene 25291 25626 . + . ID=gene-HMPREF3107_04480;Name=HMPREF3107_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04480 KV790793.1 Protein Homology CDS 25291 25626 . + 0 ID=cds-OFT02304.1;Parent=gene-HMPREF3107_04480;Dbxref=NCBI_GP:OFT02304.1;Name=OFT02304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773822.1;locus_tag=HMPREF3107_04480;product=hypothetical protein;protein_id=OFT02304.1;transl_table=11 KV790793.1 Genbank gene 25656 25732 . + . ID=gene-HMPREF3107_04485;Name=HMPREF3107_04485;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04485 KV790793.1 tRNAscan-SE tRNA 25656 25732 . + . ID=rna-HMPREF3107_04485;Parent=gene-HMPREF3107_04485;anticodon=(pos:25690..25692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04485;product=tRNA-Pro KV790793.1 tRNAscan-SE exon 25656 25732 . + . ID=exon-HMPREF3107_04485-1;Parent=rna-HMPREF3107_04485;anticodon=(pos:25690..25692);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04485;product=tRNA-Pro KV790793.1 Genbank gene 25911 26717 . - . ID=gene-HMPREF3107_04490;Name=HMPREF3107_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04490 KV790793.1 Protein Homology CDS 25911 26717 . - 0 ID=cds-OFT02305.1;Parent=gene-HMPREF3107_04490;Dbxref=NCBI_GP:OFT02305.1;Name=OFT02305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773826.1;locus_tag=HMPREF3107_04490;product=glycosyltransferase;protein_id=OFT02305.1;transl_table=11 KV790793.1 Genbank gene 27068 27535 . + . ID=gene-HMPREF3107_04495;Name=HMPREF3107_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04495 KV790793.1 GeneMarkS+ CDS 27068 27535 . + 0 ID=cds-OFT02306.1;Parent=gene-HMPREF3107_04495;Dbxref=NCBI_GP:OFT02306.1;Name=OFT02306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04495;product=hypothetical protein;protein_id=OFT02306.1;transl_table=11 KV790793.1 Genbank gene 27678 28793 . - . ID=gene-HMPREF3107_04500;Name=HMPREF3107_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04500 KV790793.1 Protein Homology CDS 27678 28793 . - 0 ID=cds-OFT02307.1;Parent=gene-HMPREF3107_04500;Dbxref=NCBI_GP:OFT02307.1;Name=OFT02307.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238429.1;locus_tag=HMPREF3107_04500;product=aspartate-semialdehyde dehydrogenase;protein_id=OFT02307.1;transl_table=11 KV790793.1 Genbank gene 29167 30573 . - . ID=gene-HMPREF3107_04505;Name=HMPREF3107_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04505 KV790793.1 Protein Homology CDS 29167 30573 . - 0 ID=cds-OFT02308.1;Parent=gene-HMPREF3107_04505;Dbxref=NCBI_GP:OFT02308.1;Name=OFT02308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773836.1;locus_tag=HMPREF3107_04505;product=coproporphyrinogen III oxidase;protein_id=OFT02308.1;transl_table=11 KV790793.1 Genbank gene 30708 31442 . + . ID=gene-HMPREF3107_04510;Name=HMPREF3107_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04510 KV790793.1 Protein Homology CDS 30708 31442 . + 0 ID=cds-OFT02309.1;Parent=gene-HMPREF3107_04510;Dbxref=NCBI_GP:OFT02309.1;Name=OFT02309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448471.1;locus_tag=HMPREF3107_04510;product=transcriptional regulator;protein_id=OFT02309.1;transl_table=11 KV790793.1 Genbank gene 31487 32437 . - . ID=gene-HMPREF3107_04515;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=HMPREF3107_04515 KV790793.1 Protein Homology CDS 31487 32437 . - 0 ID=cds-OFT02310.1;Parent=gene-HMPREF3107_04515;Dbxref=NCBI_GP:OFT02310.1;Name=OFT02310.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230250.1;locus_tag=HMPREF3107_04515;product=transcriptional regulator CysB;protein_id=OFT02310.1;transl_table=11 KV790793.1 Genbank gene 32876 33628 . + . ID=gene-HMPREF3107_04520;Name=HMPREF3107_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04520 KV790793.1 Protein Homology CDS 32876 33628 . + 0 ID=cds-OFT02326.1;Parent=gene-HMPREF3107_04520;Dbxref=NCBI_GP:OFT02326.1;Name=OFT02326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426136.1;locus_tag=HMPREF3107_04520;product=hypothetical protein;protein_id=OFT02326.1;transl_table=11 KV790793.1 Genbank gene 33938 34897 . + . ID=gene-HMPREF3107_04525;Name=HMPREF3107_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04525 KV790793.1 Protein Homology CDS 33938 34897 . + 0 ID=cds-OFT02311.1;Parent=gene-HMPREF3107_04525;Dbxref=NCBI_GP:OFT02311.1;Name=OFT02311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773844.1;locus_tag=HMPREF3107_04525;product=thiamine-phosphate kinase;protein_id=OFT02311.1;transl_table=11 KV790793.1 Genbank gene 35017 35349 . - . ID=gene-HMPREF3107_04530;Name=HMPREF3107_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04530 KV790793.1 GeneMarkS+ CDS 35017 35349 . - 0 ID=cds-OFT02312.1;Parent=gene-HMPREF3107_04530;Dbxref=NCBI_GP:OFT02312.1;Name=OFT02312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04530;product=hypothetical protein;protein_id=OFT02312.1;transl_table=11 KV790793.1 Genbank gene 35360 36553 . - . ID=gene-HMPREF3107_04535;Name=HMPREF3107_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04535 KV790793.1 Protein Homology CDS 35360 36553 . - 0 ID=cds-OFT02313.1;Parent=gene-HMPREF3107_04535;Dbxref=NCBI_GP:OFT02313.1;Name=OFT02313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773848.1;locus_tag=HMPREF3107_04535;product=MFS transporter;protein_id=OFT02313.1;transl_table=11 KV790793.1 Genbank gene 36897 37358 . - . ID=gene-HMPREF3107_04540;Name=HMPREF3107_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04540 KV790793.1 Protein Homology CDS 36897 37358 . - 0 ID=cds-OFT02314.1;Parent=gene-HMPREF3107_04540;Dbxref=NCBI_GP:OFT02314.1;Name=OFT02314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742782.1;locus_tag=HMPREF3107_04540;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=OFT02314.1;transl_table=11 KV790793.1 Genbank gene 37440 38192 . - . ID=gene-HMPREF3107_04545;Name=HMPREF3107_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04545 KV790793.1 Protein Homology CDS 37440 38192 . - 0 ID=cds-OFT02315.1;Parent=gene-HMPREF3107_04545;Dbxref=NCBI_GP:OFT02315.1;Name=OFT02315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174279.1;locus_tag=HMPREF3107_04545;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=OFT02315.1;transl_table=11 KV790793.1 Genbank gene 38192 38683 . - . ID=gene-HMPREF3107_04550;Name=HMPREF3107_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04550 KV790793.1 GeneMarkS+ CDS 38192 38683 . - 0 ID=cds-OFT02316.1;Parent=gene-HMPREF3107_04550;Dbxref=NCBI_GP:OFT02316.1;Name=OFT02316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04550;product=hypothetical protein;protein_id=OFT02316.1;transl_table=11 KV790793.1 Genbank gene 38858 39709 . - . ID=gene-HMPREF3107_04555;Name=HMPREF3107_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04555 KV790793.1 Protein Homology CDS 38858 39709 . - 0 ID=cds-OFT02327.1;Parent=gene-HMPREF3107_04555;Dbxref=NCBI_GP:OFT02327.1;Name=OFT02327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574295.1;locus_tag=HMPREF3107_04555;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;protein_id=OFT02327.1;transl_table=11 KV790793.1 Genbank gene 39919 39996 . + . ID=gene-HMPREF3107_04560;Name=HMPREF3107_04560;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04560 KV790793.1 tRNAscan-SE tRNA 39919 39996 . + . ID=rna-HMPREF3107_04560;Parent=gene-HMPREF3107_04560;anticodon=(pos:39954..39956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04560;product=tRNA-Pro KV790793.1 tRNAscan-SE exon 39919 39996 . + . ID=exon-HMPREF3107_04560-1;Parent=rna-HMPREF3107_04560;anticodon=(pos:39954..39956);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04560;product=tRNA-Pro KV790793.1 Genbank gene 40030 40106 . + . ID=gene-HMPREF3107_04565;Name=HMPREF3107_04565;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04565 KV790793.1 tRNAscan-SE tRNA 40030 40106 . + . ID=rna-HMPREF3107_04565;Parent=gene-HMPREF3107_04565;anticodon=(pos:40064..40066);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04565;product=tRNA-Arg KV790793.1 tRNAscan-SE exon 40030 40106 . + . ID=exon-HMPREF3107_04565-1;Parent=rna-HMPREF3107_04565;anticodon=(pos:40064..40066);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04565;product=tRNA-Arg KV790793.1 Genbank gene 40127 40202 . + . ID=gene-HMPREF3107_04570;Name=HMPREF3107_04570;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_04570 KV790793.1 tRNAscan-SE tRNA 40127 40202 . + . ID=rna-HMPREF3107_04570;Parent=gene-HMPREF3107_04570;anticodon=(pos:40160..40162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04570;product=tRNA-His KV790793.1 tRNAscan-SE exon 40127 40202 . + . ID=exon-HMPREF3107_04570-1;Parent=rna-HMPREF3107_04570;anticodon=(pos:40160..40162);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_04570;product=tRNA-His KV790793.1 Genbank gene 40438 40938 . + . ID=gene-HMPREF3107_04575;Name=HMPREF3107_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04575 KV790793.1 Protein Homology CDS 40438 40938 . + 0 ID=cds-OFT02317.1;Parent=gene-HMPREF3107_04575;Dbxref=NCBI_GP:OFT02317.1;Name=OFT02317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117122.1;locus_tag=HMPREF3107_04575;product=ADP-heptose synthase;protein_id=OFT02317.1;transl_table=11 KV790793.1 Genbank gene 40939 42657 . + . ID=gene-HMPREF3107_04580;Name=HMPREF3107_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04580 KV790793.1 Protein Homology CDS 40939 42657 . + 0 ID=cds-OFT02318.1;Parent=gene-HMPREF3107_04580;Dbxref=NCBI_GP:OFT02318.1;Name=OFT02318.1;Note=activates biotin to form biotinyl-5'-adenylate and transfers the biotin moiety to biotin-accepting proteins and catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis%3B type III%3B type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271128.1;locus_tag=HMPREF3107_04580;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/pantothenate kinase;protein_id=OFT02318.1;transl_table=11 KV790793.1 Genbank gene 42654 43565 . + . ID=gene-HMPREF3107_04585;Name=HMPREF3107_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04585 KV790793.1 Protein Homology CDS 42654 43565 . + 0 ID=cds-OFT02319.1;Parent=gene-HMPREF3107_04585;Dbxref=NCBI_GP:OFT02319.1;Name=OFT02319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773864.1;locus_tag=HMPREF3107_04585;product=hypothetical protein;protein_id=OFT02319.1;transl_table=11 KV790793.1 Genbank gene 44053 45219 . + . ID=gene-HMPREF3107_04590;Name=HMPREF3107_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04590 KV790793.1 Protein Homology CDS 44053 45219 . + 0 ID=cds-OFT02320.1;Parent=gene-HMPREF3107_04590;Dbxref=NCBI_GP:OFT02320.1;Name=OFT02320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283795.1;locus_tag=HMPREF3107_04590;product=hypothetical protein;protein_id=OFT02320.1;transl_table=11 KV790793.1 Genbank gene 45432 48248 . + . ID=gene-HMPREF3107_04595;Name=HMPREF3107_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04595 KV790793.1 Protein Homology CDS 45432 48248 . + 0 ID=cds-OFT02321.1;Parent=gene-HMPREF3107_04595;Dbxref=NCBI_GP:OFT02321.1;Name=OFT02321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427280.1;locus_tag=HMPREF3107_04595;product=isoleucine--tRNA ligase;protein_id=OFT02321.1;transl_table=11 KV790793.1 Genbank gene 48474 49058 . + . ID=gene-HMPREF3107_04600;Name=HMPREF3107_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04600 KV790793.1 Protein Homology CDS 48474 49058 . + 0 ID=cds-OFT02322.1;Parent=gene-HMPREF3107_04600;Dbxref=NCBI_GP:OFT02322.1;Name=OFT02322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427281.1;locus_tag=HMPREF3107_04600;product=hypothetical protein;protein_id=OFT02322.1;transl_table=11 KV790793.1 Genbank gene 49321 50571 . - . ID=gene-HMPREF3107_04605;Name=HMPREF3107_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04605 KV790793.1 Protein Homology CDS 49321 50571 . - 0 ID=cds-OFT02265.1;Parent=gene-HMPREF3107_04605;Dbxref=NCBI_GP:OFT02265.1;Name=OFT02265.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773889.1;locus_tag=HMPREF3107_04605;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=OFT02265.1;transl_table=11 KV790793.1 Genbank gene 50607 50852 . - . ID=gene-HMPREF3107_04610;Name=HMPREF3107_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04610 KV790793.1 Protein Homology CDS 50607 50852 . - 0 ID=cds-OFT02266.1;Parent=gene-HMPREF3107_04610;Dbxref=NCBI_GP:OFT02266.1;Name=OFT02266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773891.1;locus_tag=HMPREF3107_04610;product=BolA family transcriptional regulator;protein_id=OFT02266.1;transl_table=11 KV790793.1 Genbank gene 51012 51314 . - . ID=gene-HMPREF3107_04615;Name=HMPREF3107_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04615 KV790793.1 Protein Homology CDS 51012 51314 . - 0 ID=cds-OFT02267.1;Parent=gene-HMPREF3107_04615;Dbxref=NCBI_GP:OFT02267.1;Name=OFT02267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773893.1;locus_tag=HMPREF3107_04615;product=hypothetical protein;protein_id=OFT02267.1;transl_table=11 KV790793.1 Genbank gene 51416 52342 . - . ID=gene-HMPREF3107_04620;Name=HMPREF3107_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04620 KV790793.1 Protein Homology CDS 51416 52342 . - 0 ID=cds-OFT02268.1;Parent=gene-HMPREF3107_04620;Dbxref=NCBI_GP:OFT02268.1;Name=OFT02268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341584.1;locus_tag=HMPREF3107_04620;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=OFT02268.1;transl_table=11 KV790793.1 Genbank gene 52528 53274 . + . ID=gene-HMPREF3107_04625;Name=HMPREF3107_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04625 KV790793.1 Protein Homology CDS 52528 53274 . + 0 ID=cds-OFT02275.1;Parent=gene-HMPREF3107_04625;Dbxref=NCBI_GP:OFT02275.1;Name=OFT02275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235972.1;locus_tag=HMPREF3107_04625;product=amino acid ABC transporter permease;protein_id=OFT02275.1;transl_table=11 KV790793.1 Genbank gene 53362 53850 . - . ID=gene-HMPREF3107_04630;Name=HMPREF3107_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04630 KV790793.1 Protein Homology CDS 53362 53850 . - 0 ID=cds-OFT02269.1;Parent=gene-HMPREF3107_04630;Dbxref=NCBI_GP:OFT02269.1;Name=OFT02269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773898.1;locus_tag=HMPREF3107_04630;product=hypothetical protein;protein_id=OFT02269.1;transl_table=11 KV790793.1 Genbank gene 54155 54526 . - . ID=gene-HMPREF3107_04635;Name=HMPREF3107_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04635 KV790793.1 Protein Homology CDS 54155 54526 . - 0 ID=cds-OFT02270.1;Parent=gene-HMPREF3107_04635;Dbxref=NCBI_GP:OFT02270.1;Name=OFT02270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740765.1;locus_tag=HMPREF3107_04635;product=sulfurtransferase;protein_id=OFT02270.1;transl_table=11 KV790793.1 Genbank gene 54718 55053 . - . ID=gene-HMPREF3107_04640;Name=HMPREF3107_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04640 KV790793.1 Protein Homology CDS 54718 55053 . - 0 ID=cds-OFT02271.1;Parent=gene-HMPREF3107_04640;Dbxref=NCBI_GP:OFT02271.1;Name=OFT02271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341467.1;locus_tag=HMPREF3107_04640;product=hypothetical protein;protein_id=OFT02271.1;transl_table=11 KV790793.1 Genbank gene 55225 56154 . + . ID=gene-HMPREF3107_04645;Name=HMPREF3107_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04645 KV790793.1 Protein Homology CDS 55225 56154 . + 0 ID=cds-OFT02272.1;Parent=gene-HMPREF3107_04645;Dbxref=NCBI_GP:OFT02272.1;Name=OFT02272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773907.1;locus_tag=HMPREF3107_04645;product=AraC family transcriptional regulator;protein_id=OFT02272.1;transl_table=11 KV790793.1 Genbank gene 56279 56962 . - . ID=gene-HMPREF3107_04650;Name=HMPREF3107_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04650 KV790793.1 Protein Homology CDS 56279 56962 . - 0 ID=cds-OFT02273.1;Parent=gene-HMPREF3107_04650;Dbxref=NCBI_GP:OFT02273.1;Name=OFT02273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773912.1;locus_tag=HMPREF3107_04650;product=hypothetical protein;protein_id=OFT02273.1;transl_table=11 KV790793.1 Genbank gene 57051 57728 . - . ID=gene-HMPREF3107_04655;Name=HMPREF3107_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04655 KV790793.1 Protein Homology CDS 57051 57728 . - 0 ID=cds-OFT02274.1;Parent=gene-HMPREF3107_04655;Dbxref=NCBI_GP:OFT02274.1;Name=OFT02274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682209.1;locus_tag=HMPREF3107_04655;product=DNA-binding response regulator;protein_id=OFT02274.1;transl_table=11 KV790793.1 Genbank gene 58022 59296 . - . ID=gene-HMPREF3107_04660;Name=HMPREF3107_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04660 KV790793.1 GeneMarkS+ CDS 58022 59296 . - 0 ID=cds-OFT02163.1;Parent=gene-HMPREF3107_04660;Dbxref=NCBI_GP:OFT02163.1;Name=OFT02163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04660;product=hypothetical protein;protein_id=OFT02163.1;transl_table=11 KV790793.1 Genbank gene 59394 60350 . - . ID=gene-HMPREF3107_04665;Name=HMPREF3107_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04665 KV790793.1 Protein Homology CDS 59394 60350 . - 0 ID=cds-OFT02164.1;Parent=gene-HMPREF3107_04665;Dbxref=NCBI_GP:OFT02164.1;Name=OFT02164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784617.1;locus_tag=HMPREF3107_04665;product=alpha/beta hydrolase;protein_id=OFT02164.1;transl_table=11 KV790793.1 Genbank gene 60355 60867 . - . ID=gene-HMPREF3107_04670;Name=HMPREF3107_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04670 KV790793.1 Protein Homology CDS 60355 60867 . - 0 ID=cds-OFT02165.1;Parent=gene-HMPREF3107_04670;Dbxref=NCBI_GP:OFT02165.1;Name=OFT02165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772889.1;locus_tag=HMPREF3107_04670;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFT02165.1;transl_table=11 KV790793.1 Genbank gene 60922 61254 . - . ID=gene-HMPREF3107_04675;Name=HMPREF3107_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04675 KV790793.1 GeneMarkS+ CDS 60922 61254 . - 0 ID=cds-OFT02166.1;Parent=gene-HMPREF3107_04675;Dbxref=NCBI_GP:OFT02166.1;Name=OFT02166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04675;product=hypothetical protein;protein_id=OFT02166.1;transl_table=11 KV790793.1 Genbank gene 61332 61838 . - . ID=gene-HMPREF3107_04680;Name=HMPREF3107_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04680 KV790793.1 GeneMarkS+ CDS 61332 61838 . - 0 ID=cds-OFT02167.1;Parent=gene-HMPREF3107_04680;Dbxref=NCBI_GP:OFT02167.1;Name=OFT02167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04680;product=hypothetical protein;protein_id=OFT02167.1;transl_table=11 KV790793.1 Genbank gene 61869 62558 . - . ID=gene-HMPREF3107_04685;Name=HMPREF3107_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04685 KV790793.1 Protein Homology CDS 61869 62558 . - 0 ID=cds-OFT02168.1;Parent=gene-HMPREF3107_04685;Dbxref=NCBI_GP:OFT02168.1;Name=OFT02168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273595.1;locus_tag=HMPREF3107_04685;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFT02168.1;transl_table=11 KV790793.1 Genbank gene 62555 63289 . - . ID=gene-HMPREF3107_04690;Name=HMPREF3107_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04690 KV790793.1 Protein Homology CDS 62555 63289 . - 0 ID=cds-OFT02169.1;Parent=gene-HMPREF3107_04690;Dbxref=NCBI_GP:OFT02169.1;Name=OFT02169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772896.1;locus_tag=HMPREF3107_04690;product=DNA polymerase III subunit epsilon;protein_id=OFT02169.1;transl_table=11 KV790793.1 Genbank gene 63570 64049 . + . ID=gene-HMPREF3107_04695;Name=HMPREF3107_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04695 KV790793.1 Protein Homology CDS 63570 64049 . + 0 ID=cds-OFT02170.1;Parent=gene-HMPREF3107_04695;Dbxref=NCBI_GP:OFT02170.1;Name=OFT02170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772901.1;locus_tag=HMPREF3107_04695;product=hypothetical protein;protein_id=OFT02170.1;transl_table=11 KV790793.1 Genbank gene 64180 64866 . + . ID=gene-HMPREF3107_04700;Name=HMPREF3107_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04700 KV790793.1 Protein Homology CDS 64180 64866 . + 0 ID=cds-OFT02171.1;Parent=gene-HMPREF3107_04700;Dbxref=NCBI_GP:OFT02171.1;Name=OFT02171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746953.1;locus_tag=HMPREF3107_04700;product=16S rRNA pseudouridine(516) synthase;protein_id=OFT02171.1;transl_table=11 KV790793.1 Genbank gene 65554 66468 . + . ID=gene-HMPREF3107_04705;Name=HMPREF3107_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04705 KV790793.1 Protein Homology CDS 65554 66468 . + 0 ID=cds-OFT02210.1;Parent=gene-HMPREF3107_04705;Dbxref=NCBI_GP:OFT02210.1;Name=OFT02210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426825.1;locus_tag=HMPREF3107_04705;product=tRNA glutamyl-Q synthetase;protein_id=OFT02210.1;transl_table=11 KV790793.1 Genbank gene 66540 66755 . - . ID=gene-HMPREF3107_04710;Name=HMPREF3107_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04710 KV790793.1 GeneMarkS+ CDS 66540 66755 . - 0 ID=cds-OFT02172.1;Parent=gene-HMPREF3107_04710;Dbxref=NCBI_GP:OFT02172.1;Name=OFT02172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04710;product=hypothetical protein;protein_id=OFT02172.1;transl_table=11 KV790793.1 Genbank gene 66927 67490 . - . ID=gene-HMPREF3107_04715;Name=HMPREF3107_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04715 KV790793.1 Protein Homology CDS 66927 67490 . - 0 ID=cds-OFT02173.1;Parent=gene-HMPREF3107_04715;Dbxref=NCBI_GP:OFT02173.1;Name=OFT02173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341530.1;locus_tag=HMPREF3107_04715;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=OFT02173.1;transl_table=11 KV790793.1 Genbank gene 67611 68114 . - . ID=gene-HMPREF3107_04720;Name=HMPREF3107_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04720 KV790793.1 Protein Homology CDS 67611 68114 . - 0 ID=cds-OFT02174.1;Parent=gene-HMPREF3107_04720;Dbxref=NCBI_GP:OFT02174.1;Name=OFT02174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283168.1;locus_tag=HMPREF3107_04720;product=phosphinothricin acetyltransferase;protein_id=OFT02174.1;transl_table=11 KV790793.1 Genbank gene 68126 68665 . - . ID=gene-HMPREF3107_04725;Name=HMPREF3107_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04725 KV790793.1 Protein Homology CDS 68126 68665 . - 0 ID=cds-OFT02175.1;Parent=gene-HMPREF3107_04725;Dbxref=NCBI_GP:OFT02175.1;Name=OFT02175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117611.1;locus_tag=HMPREF3107_04725;product=isochorismatase;protein_id=OFT02175.1;transl_table=11 KV790793.1 Genbank gene 68769 70193 . - . ID=gene-HMPREF3107_04730;Name=HMPREF3107_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04730 KV790793.1 Protein Homology CDS 68769 70193 . - 0 ID=cds-OFT02176.1;Parent=gene-HMPREF3107_04730;Dbxref=NCBI_GP:OFT02176.1;Name=OFT02176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772986.1;locus_tag=HMPREF3107_04730;product=hypothetical protein;protein_id=OFT02176.1;transl_table=11 KV790793.1 Genbank gene 70355 71197 . - . ID=gene-HMPREF3107_04735;Name=HMPREF3107_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04735 KV790793.1 Protein Homology CDS 70355 71197 . - 0 ID=cds-OFT02177.1;Parent=gene-HMPREF3107_04735;Dbxref=NCBI_GP:OFT02177.1;Name=OFT02177.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752673.1;locus_tag=HMPREF3107_04735;product=3-deoxy-8-phosphooctulonate synthase;protein_id=OFT02177.1;transl_table=11 KV790793.1 Genbank gene 71260 72276 . - . ID=gene-HMPREF3107_04740;Name=HMPREF3107_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04740 KV790793.1 Protein Homology CDS 71260 72276 . - 0 ID=cds-OFT02178.1;Parent=gene-HMPREF3107_04740;Dbxref=NCBI_GP:OFT02178.1;Name=OFT02178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714176.1;locus_tag=HMPREF3107_04740;product=UDP-glucose 4-epimerase;protein_id=OFT02178.1;transl_table=11 KV790793.1 Genbank gene 72394 72834 . - . ID=gene-HMPREF3107_04745;Name=HMPREF3107_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04745 KV790793.1 Protein Homology CDS 72394 72834 . - 0 ID=cds-OFT02179.1;Parent=gene-HMPREF3107_04745;Dbxref=NCBI_GP:OFT02179.1;Name=OFT02179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748784.1;locus_tag=HMPREF3107_04745;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=OFT02179.1;transl_table=11 KV790793.1 Genbank gene 72867 73559 . - . ID=gene-HMPREF3107_04750;Name=HMPREF3107_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04750 KV790793.1 Protein Homology CDS 72867 73559 . - 0 ID=cds-OFT02180.1;Parent=gene-HMPREF3107_04750;Dbxref=NCBI_GP:OFT02180.1;Name=OFT02180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777007.1;locus_tag=HMPREF3107_04750;product=hypothetical protein;protein_id=OFT02180.1;transl_table=11 KV790793.1 Genbank gene 73624 75387 . - . ID=gene-HMPREF3107_04755;Name=HMPREF3107_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04755 KV790793.1 Protein Homology CDS 73624 75387 . - 0 ID=cds-OFT02181.1;Parent=gene-HMPREF3107_04755;Dbxref=NCBI_GP:OFT02181.1;Name=OFT02181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757992.1;locus_tag=HMPREF3107_04755;product=peptidase;protein_id=OFT02181.1;transl_table=11 KV790793.1 Genbank gene 75718 77163 . + . ID=gene-HMPREF3107_04760;Name=HMPREF3107_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04760 KV790793.1 Protein Homology CDS 75718 77163 . + 0 ID=cds-OFT02182.1;Parent=gene-HMPREF3107_04760;Dbxref=NCBI_GP:OFT02182.1;Name=OFT02182.1;Note=CcoN%3B FixN;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425113.1;locus_tag=HMPREF3107_04760;product=cytochrome C oxidase Cbb3;protein_id=OFT02182.1;transl_table=11 KV790793.1 Genbank gene 77185 77796 . + . ID=gene-HMPREF3107_04765;Name=HMPREF3107_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04765 KV790793.1 Protein Homology CDS 77185 77796 . + 0 ID=cds-OFT02183.1;Parent=gene-HMPREF3107_04765;Dbxref=NCBI_GP:OFT02183.1;Name=OFT02183.1;Note=CcoO%3B FixO;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242940.1;locus_tag=HMPREF3107_04765;product=cytochrome C oxidase Cbb3;protein_id=OFT02183.1;transl_table=11 KV790793.1 Genbank gene 77801 77980 . + . ID=gene-HMPREF3107_04770;Name=HMPREF3107_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04770 KV790793.1 Protein Homology CDS 77801 77980 . + 0 ID=cds-OFT02184.1;Parent=gene-HMPREF3107_04770;Dbxref=NCBI_GP:OFT02184.1;Name=OFT02184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772978.1;locus_tag=HMPREF3107_04770;product=cytochrome C oxidase subunit IV;protein_id=OFT02184.1;transl_table=11 KV790793.1 Genbank pseudogene 78004 78951 . + . ID=gene-HMPREF3107_04775;Name=HMPREF3107_04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_04775;pseudo=true KV790793.1 Protein Homology CDS 78004 78951 . + 0 ID=cds-HMPREF3107_04775;Parent=gene-HMPREF3107_04775;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008953114.1;locus_tag=HMPREF3107_04775;product=cytochrome oxidase subunit III;pseudo=true;transl_table=11 KV790793.1 Genbank gene 79531 80367 . - . ID=gene-HMPREF3107_04780;Name=HMPREF3107_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04780 KV790793.1 Protein Homology CDS 79531 80367 . - 0 ID=cds-OFT02185.1;Parent=gene-HMPREF3107_04780;Dbxref=NCBI_GP:OFT02185.1;Name=OFT02185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747096.1;locus_tag=HMPREF3107_04780;product=hypothetical protein;protein_id=OFT02185.1;transl_table=11 KV790793.1 Genbank gene 80565 80957 . - . ID=gene-HMPREF3107_04785;Name=HMPREF3107_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04785 KV790793.1 Protein Homology CDS 80565 80957 . - 0 ID=cds-OFT02186.1;Parent=gene-HMPREF3107_04785;Dbxref=NCBI_GP:OFT02186.1;Name=OFT02186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772972.1;locus_tag=HMPREF3107_04785;product=RNA-binding protein;protein_id=OFT02186.1;transl_table=11 KV790793.1 Genbank gene 81153 82112 . + . ID=gene-HMPREF3107_04790;Name=HMPREF3107_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04790 KV790793.1 Protein Homology CDS 81153 82112 . + 0 ID=cds-OFT02187.1;Parent=gene-HMPREF3107_04790;Dbxref=NCBI_GP:OFT02187.1;Name=OFT02187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343070.1;locus_tag=HMPREF3107_04790;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=OFT02187.1;transl_table=11 KV790793.1 Genbank gene 82214 83785 . + . ID=gene-HMPREF3107_04795;Name=HMPREF3107_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04795 KV790793.1 Protein Homology CDS 82214 83785 . + 0 ID=cds-OFT02188.1;Parent=gene-HMPREF3107_04795;Dbxref=NCBI_GP:OFT02188.1;Name=OFT02188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214054.1;locus_tag=HMPREF3107_04795;product=oxidoreductase;protein_id=OFT02188.1;transl_table=11 KV790793.1 Genbank gene 83997 84512 . + . ID=gene-HMPREF3107_04800;Name=HMPREF3107_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04800 KV790793.1 Protein Homology CDS 83997 84512 . + 0 ID=cds-OFT02189.1;Parent=gene-HMPREF3107_04800;Dbxref=NCBI_GP:OFT02189.1;Name=OFT02189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771842.1;locus_tag=HMPREF3107_04800;product=signal peptidase II;protein_id=OFT02189.1;transl_table=11 KV790793.1 Genbank gene 84509 85459 . + . ID=gene-HMPREF3107_04805;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF3107_04805 KV790793.1 Protein Homology CDS 84509 85459 . + 0 ID=cds-OFT02190.1;Parent=gene-HMPREF3107_04805;Dbxref=NCBI_GP:OFT02190.1;Name=OFT02190.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771837.1;locus_tag=HMPREF3107_04805;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=OFT02190.1;transl_table=11 KV790793.1 Genbank pseudogene 85665 86705 . + . ID=gene-HMPREF3107_04810;Name=HMPREF3107_04810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_04810;pseudo=true KV790793.1 Protein Homology CDS 85665 86705 . + 0 ID=cds-HMPREF3107_04810;Parent=gene-HMPREF3107_04810;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225132.1;locus_tag=HMPREF3107_04810;product=alcohol dehydrogenase;pseudo=true;transl_table=11 KV790793.1 Genbank gene 86934 90827 . - . ID=gene-HMPREF3107_04815;Name=HMPREF3107_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04815 KV790793.1 Protein Homology CDS 86934 90827 . - 0 ID=cds-OFT02191.1;Parent=gene-HMPREF3107_04815;Dbxref=NCBI_GP:OFT02191.1;Name=OFT02191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342458.1;locus_tag=HMPREF3107_04815;product=hypothetical protein;protein_id=OFT02191.1;transl_table=11 KV790793.1 Genbank gene 90828 92681 . - . ID=gene-HMPREF3107_04820;Name=HMPREF3107_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04820 KV790793.1 Protein Homology CDS 90828 92681 . - 0 ID=cds-OFT02192.1;Parent=gene-HMPREF3107_04820;Dbxref=NCBI_GP:OFT02192.1;Name=OFT02192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312531.1;locus_tag=HMPREF3107_04820;product=hypothetical protein;protein_id=OFT02192.1;transl_table=11 KV790793.1 Genbank gene 92855 93916 . + . ID=gene-HMPREF3107_04825;Name=HMPREF3107_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04825 KV790793.1 Protein Homology CDS 92855 93916 . + 0 ID=cds-OFT02211.1;Parent=gene-HMPREF3107_04825;Dbxref=NCBI_GP:OFT02211.1;Name=OFT02211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518799.1;locus_tag=HMPREF3107_04825;product=putative lipopolysaccharide heptosyltransferase III;protein_id=OFT02211.1;transl_table=11 KV790793.1 Genbank gene 94005 96680 . + . ID=gene-HMPREF3107_04830;Name=HMPREF3107_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04830 KV790793.1 Protein Homology CDS 94005 96680 . + 0 ID=cds-OFT02193.1;Parent=gene-HMPREF3107_04830;Dbxref=NCBI_GP:OFT02193.1;Name=OFT02193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771822.1;locus_tag=HMPREF3107_04830;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=OFT02193.1;transl_table=11 KV790793.1 Genbank gene 96972 97469 . + . ID=gene-HMPREF3107_04835;Name=HMPREF3107_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04835 KV790793.1 Protein Homology CDS 96972 97469 . + 0 ID=cds-OFT02194.1;Parent=gene-HMPREF3107_04835;Dbxref=NCBI_GP:OFT02194.1;Name=OFT02194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015674483.1;locus_tag=HMPREF3107_04835;product=phosphatidylethanolamine-binding protein;protein_id=OFT02194.1;transl_table=11 KV790793.1 Genbank gene 97539 98915 . + . ID=gene-HMPREF3107_04840;Name=HMPREF3107_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04840 KV790793.1 GeneMarkS+ CDS 97539 98915 . + 0 ID=cds-OFT02195.1;Parent=gene-HMPREF3107_04840;Dbxref=NCBI_GP:OFT02195.1;Name=OFT02195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04840;product=hypothetical protein;protein_id=OFT02195.1;transl_table=11 KV790793.1 Genbank gene 99071 100123 . - . ID=gene-HMPREF3107_04845;Name=HMPREF3107_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04845 KV790793.1 Protein Homology CDS 99071 100123 . - 0 ID=cds-OFT02196.1;Parent=gene-HMPREF3107_04845;Dbxref=NCBI_GP:OFT02196.1;Name=OFT02196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174612.1;locus_tag=HMPREF3107_04845;product=oxidoreductase;protein_id=OFT02196.1;transl_table=11 KV790793.1 Genbank gene 100138 101442 . - . ID=gene-HMPREF3107_04850;Name=HMPREF3107_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04850 KV790793.1 Protein Homology CDS 100138 101442 . - 0 ID=cds-OFT02212.1;Parent=gene-HMPREF3107_04850;Dbxref=NCBI_GP:OFT02212.1;Name=OFT02212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520865.1;locus_tag=HMPREF3107_04850;product=UDP-N-acetyl-D-glucosamine dehydrogenase;protein_id=OFT02212.1;transl_table=11 KV790793.1 Genbank gene 101642 102817 . - . ID=gene-HMPREF3107_04855;Name=HMPREF3107_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04855 KV790793.1 Protein Homology CDS 101642 102817 . - 0 ID=cds-OFT02197.1;Parent=gene-HMPREF3107_04855;Dbxref=NCBI_GP:OFT02197.1;Name=OFT02197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687196.1;locus_tag=HMPREF3107_04855;product=aminotransferase;protein_id=OFT02197.1;transl_table=11 KV790793.1 Genbank gene 102941 103609 . - . ID=gene-HMPREF3107_04860;Name=HMPREF3107_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04860 KV790793.1 Protein Homology CDS 102941 103609 . - 0 ID=cds-OFT02198.1;Parent=gene-HMPREF3107_04860;Dbxref=NCBI_GP:OFT02198.1;Name=OFT02198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771795.1;locus_tag=HMPREF3107_04860;product=pilus assembly protein;protein_id=OFT02198.1;transl_table=11 KV790793.1 Genbank gene 103625 104233 . - . ID=gene-HMPREF3107_04865;Name=HMPREF3107_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04865 KV790793.1 Protein Homology CDS 103625 104233 . - 0 ID=cds-OFT02199.1;Parent=gene-HMPREF3107_04865;Dbxref=NCBI_GP:OFT02199.1;Name=OFT02199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771794.1;locus_tag=HMPREF3107_04865;product=sugar transferase;protein_id=OFT02199.1;transl_table=11 KV790793.1 Genbank gene 104250 104642 . - . ID=gene-HMPREF3107_04870;Name=HMPREF3107_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04870 KV790793.1 Protein Homology CDS 104250 104642 . - 0 ID=cds-OFT02200.1;Parent=gene-HMPREF3107_04870;Dbxref=NCBI_GP:OFT02200.1;Name=OFT02200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771790.1;locus_tag=HMPREF3107_04870;product=hypothetical protein;protein_id=OFT02200.1;transl_table=11 KV790793.1 Genbank gene 104701 105096 . - . ID=gene-HMPREF3107_04875;Name=HMPREF3107_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04875 KV790793.1 GeneMarkS+ CDS 104701 105096 . - 0 ID=cds-OFT02201.1;Parent=gene-HMPREF3107_04875;Dbxref=NCBI_GP:OFT02201.1;Name=OFT02201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04875;product=hypothetical protein;protein_id=OFT02201.1;transl_table=11 KV790793.1 Genbank gene 105210 105605 . - . ID=gene-HMPREF3107_04880;Name=HMPREF3107_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04880 KV790793.1 GeneMarkS+ CDS 105210 105605 . - 0 ID=cds-OFT02202.1;Parent=gene-HMPREF3107_04880;Dbxref=NCBI_GP:OFT02202.1;Name=OFT02202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04880;product=hypothetical protein;protein_id=OFT02202.1;transl_table=11 KV790793.1 Genbank gene 105660 106829 . - . ID=gene-HMPREF3107_04885;Name=HMPREF3107_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04885 KV790793.1 Protein Homology CDS 105660 106829 . - 0 ID=cds-OFT02213.1;Parent=gene-HMPREF3107_04885;Dbxref=NCBI_GP:OFT02213.1;Name=OFT02213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016670743.1;locus_tag=HMPREF3107_04885;product=hypothetical protein;protein_id=OFT02213.1;transl_table=11 KV790793.1 Genbank gene 107121 108191 . - . ID=gene-HMPREF3107_04890;Name=HMPREF3107_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04890 KV790793.1 Protein Homology CDS 107121 108191 . - 0 ID=cds-OFT02203.1;Parent=gene-HMPREF3107_04890;Dbxref=NCBI_GP:OFT02203.1;Name=OFT02203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258336.1;locus_tag=HMPREF3107_04890;product=hypothetical protein;protein_id=OFT02203.1;transl_table=11 KV790793.1 Genbank gene 108359 109402 . - . ID=gene-HMPREF3107_04895;Name=HMPREF3107_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04895 KV790793.1 Protein Homology CDS 108359 109402 . - 0 ID=cds-OFT02204.1;Parent=gene-HMPREF3107_04895;Dbxref=NCBI_GP:OFT02204.1;Name=OFT02204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761677.1;locus_tag=HMPREF3107_04895;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=OFT02204.1;transl_table=11 KV790793.1 Genbank gene 109706 111043 . - . ID=gene-HMPREF3107_04900;Name=HMPREF3107_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04900 KV790793.1 Protein Homology CDS 109706 111043 . - 0 ID=cds-OFT02205.1;Parent=gene-HMPREF3107_04900;Dbxref=NCBI_GP:OFT02205.1;Name=OFT02205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285744.1;locus_tag=HMPREF3107_04900;product=murein transglycosylase;protein_id=OFT02205.1;transl_table=11 KV790793.1 Genbank gene 111175 111957 . - . ID=gene-HMPREF3107_04905;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=HMPREF3107_04905 KV790793.1 Protein Homology CDS 111175 111957 . - 0 ID=cds-OFT02206.1;Parent=gene-HMPREF3107_04905;Dbxref=NCBI_GP:OFT02206.1;Name=OFT02206.1;Note=involved in tryptophan biosynthesis%3B amino acid biosynthesis%3B converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water;gbkey=CDS;gene=trpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520236.1;locus_tag=HMPREF3107_04905;product=indole-3-glycerol-phosphate synthase;protein_id=OFT02206.1;transl_table=11 KV790793.1 Genbank gene 112184 112570 . - . ID=gene-HMPREF3107_04910;Name=HMPREF3107_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04910 KV790793.1 Protein Homology CDS 112184 112570 . - 0 ID=cds-OFT02214.1;Parent=gene-HMPREF3107_04910;Dbxref=NCBI_GP:OFT02214.1;Name=OFT02214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681338.1;locus_tag=HMPREF3107_04910;product=MarR family transcriptional regulator;protein_id=OFT02214.1;transl_table=11 KV790793.1 Genbank gene 112745 114160 . + . ID=gene-HMPREF3107_04915;Name=HMPREF3107_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04915 KV790793.1 Protein Homology CDS 112745 114160 . + 0 ID=cds-OFT02207.1;Parent=gene-HMPREF3107_04915;Dbxref=NCBI_GP:OFT02207.1;Name=OFT02207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341644.1;locus_tag=HMPREF3107_04915;product=sodium:alanine symporter;protein_id=OFT02207.1;transl_table=11 KV790793.1 Genbank gene 114444 115610 . - . ID=gene-HMPREF3107_04920;Name=HMPREF3107_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04920 KV790793.1 Protein Homology CDS 114444 115610 . - 0 ID=cds-OFT02208.1;Parent=gene-HMPREF3107_04920;Dbxref=NCBI_GP:OFT02208.1;Name=OFT02208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342463.1;locus_tag=HMPREF3107_04920;product=cystathionine gamma-synthase;protein_id=OFT02208.1;transl_table=11 KV790793.1 Genbank gene 115820 116593 . + . ID=gene-HMPREF3107_04925;Name=HMPREF3107_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04925 KV790793.1 Protein Homology CDS 115820 116593 . + 0 ID=cds-OFT02209.1;Parent=gene-HMPREF3107_04925;Dbxref=NCBI_GP:OFT02209.1;Name=OFT02209.1;Note=similar protein in Methanocaldococcus converts GTP to 7%2C8-dihydro-D-neopterin 2'%2C3'-cyclic phosphate as the first step in methanopterin biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425833.1;locus_tag=HMPREF3107_04925;product=GTP cyclohydrolase FolE2;protein_id=OFT02209.1;transl_table=11 KV790793.1 Genbank gene 116926 117378 . - . ID=gene-HMPREF3107_04930;Name=HMPREF3107_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04930 KV790793.1 Protein Homology CDS 116926 117378 . - 0 ID=cds-OFT02141.1;Parent=gene-HMPREF3107_04930;Dbxref=NCBI_GP:OFT02141.1;Name=OFT02141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341326.1;locus_tag=HMPREF3107_04930;product=mechanosensitive ion channel protein MscL;protein_id=OFT02141.1;transl_table=11 KV790793.1 Genbank gene 117591 118373 . - . ID=gene-HMPREF3107_04935;Name=HMPREF3107_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04935 KV790793.1 Protein Homology CDS 117591 118373 . - 0 ID=cds-OFT02142.1;Parent=gene-HMPREF3107_04935;Dbxref=NCBI_GP:OFT02142.1;Name=OFT02142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772951.1;locus_tag=HMPREF3107_04935;product=enoyl-ACP reductase;protein_id=OFT02142.1;transl_table=11 KV790793.1 Genbank gene 118499 120292 . + . ID=gene-HMPREF3107_04940;Name=HMPREF3107_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04940 KV790793.1 Protein Homology CDS 118499 120292 . + 0 ID=cds-OFT02159.1;Parent=gene-HMPREF3107_04940;Dbxref=NCBI_GP:OFT02159.1;Name=OFT02159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772953.1;locus_tag=HMPREF3107_04940;product=peptide ABC transporter substrate-binding protein;protein_id=OFT02159.1;transl_table=11 KV790793.1 Genbank gene 120533 121213 . - . ID=gene-HMPREF3107_04945;Name=HMPREF3107_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04945 KV790793.1 Protein Homology CDS 120533 121213 . - 0 ID=cds-OFT02143.1;Parent=gene-HMPREF3107_04945;Dbxref=NCBI_GP:OFT02143.1;Name=OFT02143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283908.1;locus_tag=HMPREF3107_04945;product=hypothetical protein;protein_id=OFT02143.1;transl_table=11 KV790793.1 Genbank gene 121303 122139 . - . ID=gene-HMPREF3107_04950;Name=HMPREF3107_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04950 KV790793.1 Protein Homology CDS 121303 122139 . - 0 ID=cds-OFT02144.1;Parent=gene-HMPREF3107_04950;Dbxref=NCBI_GP:OFT02144.1;Name=OFT02144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641700.1;locus_tag=HMPREF3107_04950;product=hypothetical protein;protein_id=OFT02144.1;transl_table=11 KV790793.1 Genbank gene 122210 123469 . - . ID=gene-HMPREF3107_04955;Name=HMPREF3107_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04955 KV790793.1 Protein Homology CDS 122210 123469 . - 0 ID=cds-OFT02145.1;Parent=gene-HMPREF3107_04955;Dbxref=NCBI_GP:OFT02145.1;Name=OFT02145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688384.1;locus_tag=HMPREF3107_04955;product=gamma-glutamyl-phosphate reductase;protein_id=OFT02145.1;transl_table=11 KV790793.1 Genbank gene 123616 123894 . - . ID=gene-HMPREF3107_04960;Name=HMPREF3107_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04960 KV790793.1 Protein Homology CDS 123616 123894 . - 0 ID=cds-OFT02146.1;Parent=gene-HMPREF3107_04960;Dbxref=NCBI_GP:OFT02146.1;Name=OFT02146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769678.1;locus_tag=HMPREF3107_04960;product=cell division protein FtsB;protein_id=OFT02146.1;transl_table=11 KV790793.1 Genbank gene 123904 125190 . - . ID=gene-HMPREF3107_04965;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF3107_04965 KV790793.1 Protein Homology CDS 123904 125190 . - 0 ID=cds-OFT02147.1;Parent=gene-HMPREF3107_04965;Dbxref=NCBI_GP:OFT02147.1;Name=OFT02147.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270954.1;locus_tag=HMPREF3107_04965;product=phosphopyruvate hydratase;protein_id=OFT02147.1;transl_table=11 KV790793.1 Genbank gene 125371 125871 . - . ID=gene-HMPREF3107_04970;Name=HMPREF3107_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04970 KV790793.1 GeneMarkS+ CDS 125371 125871 . - 0 ID=cds-OFT02148.1;Parent=gene-HMPREF3107_04970;Dbxref=NCBI_GP:OFT02148.1;Name=OFT02148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04970;product=hypothetical protein;protein_id=OFT02148.1;transl_table=11 KV790793.1 Genbank gene 125968 127434 . - . ID=gene-HMPREF3107_04975;Name=HMPREF3107_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04975 KV790793.1 Protein Homology CDS 125968 127434 . - 0 ID=cds-OFT02160.1;Parent=gene-HMPREF3107_04975;Dbxref=NCBI_GP:OFT02160.1;Name=OFT02160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642279.1;locus_tag=HMPREF3107_04975;product=IMP dehydrogenase;protein_id=OFT02160.1;transl_table=11 KV790793.1 Genbank gene 127598 128074 . + . ID=gene-HMPREF3107_04980;Name=HMPREF3107_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04980 KV790793.1 Protein Homology CDS 127598 128074 . + 0 ID=cds-OFT02149.1;Parent=gene-HMPREF3107_04980;Dbxref=NCBI_GP:OFT02149.1;Name=OFT02149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769666.1;locus_tag=HMPREF3107_04980;product=YSIRK family Signal peptide;protein_id=OFT02149.1;transl_table=11 KV790793.1 Genbank gene 128086 128313 . - . ID=gene-HMPREF3107_04985;Name=HMPREF3107_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04985 KV790793.1 GeneMarkS+ CDS 128086 128313 . - 0 ID=cds-OFT02150.1;Parent=gene-HMPREF3107_04985;Dbxref=NCBI_GP:OFT02150.1;Name=OFT02150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_04985;product=hypothetical protein;protein_id=OFT02150.1;transl_table=11 KV790793.1 Genbank gene 128297 130753 . - . ID=gene-HMPREF3107_04990;Name=HMPREF3107_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04990 KV790793.1 Protein Homology CDS 128297 130753 . - 0 ID=cds-OFT02151.1;Parent=gene-HMPREF3107_04990;Dbxref=NCBI_GP:OFT02151.1;Name=OFT02151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769661.1;locus_tag=HMPREF3107_04990;product=ATPase P;protein_id=OFT02151.1;transl_table=11 KV790793.1 Genbank gene 130970 133813 . + . ID=gene-HMPREF3107_04995;Name=HMPREF3107_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_04995 KV790793.1 Protein Homology CDS 130970 133813 . + 0 ID=cds-OFT02152.1;Parent=gene-HMPREF3107_04995;Dbxref=NCBI_GP:OFT02152.1;Name=OFT02152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763958.1;locus_tag=HMPREF3107_04995;product=restriction endonuclease subunit R;protein_id=OFT02152.1;transl_table=11 KV790793.1 Genbank gene 133801 135234 . + . ID=gene-HMPREF3107_05000;Name=HMPREF3107_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05000 KV790793.1 GeneMarkS+ CDS 133801 135234 . + 0 ID=cds-OFT02153.1;Parent=gene-HMPREF3107_05000;Dbxref=NCBI_GP:OFT02153.1;Name=OFT02153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05000;product=hypothetical protein;protein_id=OFT02153.1;transl_table=11 KV790793.1 Genbank gene 135253 136749 . + . ID=gene-HMPREF3107_05005;Name=HMPREF3107_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05005 KV790793.1 Protein Homology CDS 135253 136749 . + 0 ID=cds-OFT02154.1;Parent=gene-HMPREF3107_05005;Dbxref=NCBI_GP:OFT02154.1;Name=OFT02154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778323.1;locus_tag=HMPREF3107_05005;product=DNA methyltransferase;protein_id=OFT02154.1;transl_table=11 KV790793.1 Genbank gene 137043 138311 . + . ID=gene-HMPREF3107_05010;Name=HMPREF3107_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05010 KV790793.1 Protein Homology CDS 137043 138311 . + 0 ID=cds-OFT02155.1;Parent=gene-HMPREF3107_05010;Dbxref=NCBI_GP:OFT02155.1;Name=OFT02155.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769631.1;locus_tag=HMPREF3107_05010;product=phosphoribosylamine--glycine ligase;protein_id=OFT02155.1;transl_table=11 KV790793.1 Genbank gene 138495 140522 . + . ID=gene-HMPREF3107_05015;Name=HMPREF3107_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05015 KV790793.1 Protein Homology CDS 138495 140522 . + 0 ID=cds-OFT02156.1;Parent=gene-HMPREF3107_05015;Dbxref=NCBI_GP:OFT02156.1;Name=OFT02156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P56996.1;locus_tag=HMPREF3107_05015;product=excinuclease ABC subunit B;protein_id=OFT02156.1;transl_table=11 KV790793.1 Genbank gene 140558 141442 . + . ID=gene-HMPREF3107_05020;Name=HMPREF3107_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05020 KV790793.1 Protein Homology CDS 140558 141442 . + 0 ID=cds-OFT02157.1;Parent=gene-HMPREF3107_05020;Dbxref=NCBI_GP:OFT02157.1;Name=OFT02157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219155.1;locus_tag=HMPREF3107_05020;product=hypothetical protein;protein_id=OFT02157.1;transl_table=11 KV790793.1 Genbank gene 141972 142367 . + . ID=gene-HMPREF3107_05025;Name=HMPREF3107_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05025 KV790793.1 Protein Homology CDS 141972 142367 . + 0 ID=cds-OFT02158.1;Parent=gene-HMPREF3107_05025;Dbxref=NCBI_GP:OFT02158.1;Name=OFT02158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002643072.1;locus_tag=HMPREF3107_05025;product=DUF305 domain-containing protein;protein_id=OFT02158.1;transl_table=11 ##sequence-region KV790794.1 1 16086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790794.1 Genbank region 1 16086 . + . ID=KV790794.1:1..16086;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790794.1 Genbank pseudogene 33 407 . - . ID=gene-HMPREF3107_05030;Name=HMPREF3107_05030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05030;pseudo=true KV790794.1 Protein Homology CDS 33 407 . - 0 ID=cds-HMPREF3107_05030;Parent=gene-HMPREF3107_05030;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773210.1;locus_tag=HMPREF3107_05030;product=cupin;pseudo=true;transl_table=11 KV790794.1 Genbank gene 648 1379 . + . ID=gene-HMPREF3107_05035;Name=HMPREF3107_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05035 KV790794.1 Protein Homology CDS 648 1379 . + 0 ID=cds-OFT02084.1;Parent=gene-HMPREF3107_05035;Dbxref=NCBI_GP:OFT02084.1;Name=OFT02084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773212.1;locus_tag=HMPREF3107_05035;product=DNA-binding response regulator;protein_id=OFT02084.1;transl_table=11 KV790794.1 Genbank gene 1666 2925 . + . ID=gene-HMPREF3107_05040;Name=HMPREF3107_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05040 KV790794.1 Protein Homology CDS 1666 2925 . + 0 ID=cds-OFT02085.1;Parent=gene-HMPREF3107_05040;Dbxref=NCBI_GP:OFT02085.1;Name=OFT02085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343524.1;locus_tag=HMPREF3107_05040;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=OFT02085.1;transl_table=11 KV790794.1 Genbank gene 3547 4386 . - . ID=gene-HMPREF3107_05045;Name=HMPREF3107_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05045 KV790794.1 Protein Homology CDS 3547 4386 . - 0 ID=cds-OFT02086.1;Parent=gene-HMPREF3107_05045;Dbxref=NCBI_GP:OFT02086.1;Name=OFT02086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760644.1;locus_tag=HMPREF3107_05045;product=epimerase;protein_id=OFT02086.1;transl_table=11 KV790794.1 Genbank gene 4614 5441 . - . ID=gene-HMPREF3107_05050;Name=HMPREF3107_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05050 KV790794.1 GeneMarkS+ CDS 4614 5441 . - 0 ID=cds-OFT02087.1;Parent=gene-HMPREF3107_05050;Dbxref=NCBI_GP:OFT02087.1;Name=OFT02087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05050;product=hypothetical protein;protein_id=OFT02087.1;transl_table=11 KV790794.1 Genbank gene 5438 5836 . - . ID=gene-HMPREF3107_05055;Name=HMPREF3107_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05055 KV790794.1 Protein Homology CDS 5438 5836 . - 0 ID=cds-OFT02088.1;Parent=gene-HMPREF3107_05055;Dbxref=NCBI_GP:OFT02088.1;Name=OFT02088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770783.1;locus_tag=HMPREF3107_05055;product=hypothetical protein;protein_id=OFT02088.1;transl_table=11 KV790794.1 Genbank gene 5864 6241 . - . ID=gene-HMPREF3107_05060;Name=HMPREF3107_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05060 KV790794.1 GeneMarkS+ CDS 5864 6241 . - 0 ID=cds-OFT02089.1;Parent=gene-HMPREF3107_05060;Dbxref=NCBI_GP:OFT02089.1;Name=OFT02089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05060;product=hypothetical protein;protein_id=OFT02089.1;transl_table=11 KV790794.1 Genbank gene 6238 6651 . - . ID=gene-HMPREF3107_05065;Name=HMPREF3107_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05065 KV790794.1 Protein Homology CDS 6238 6651 . - 0 ID=cds-OFT02090.1;Parent=gene-HMPREF3107_05065;Dbxref=NCBI_GP:OFT02090.1;Name=OFT02090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770786.1;locus_tag=HMPREF3107_05065;product=hypothetical protein;protein_id=OFT02090.1;transl_table=11 KV790794.1 Genbank gene 6702 7172 . - . ID=gene-HMPREF3107_05070;Name=HMPREF3107_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05070 KV790794.1 Protein Homology CDS 6702 7172 . - 0 ID=cds-OFT02091.1;Parent=gene-HMPREF3107_05070;Dbxref=NCBI_GP:OFT02091.1;Name=OFT02091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342239.1;locus_tag=HMPREF3107_05070;product=hypothetical protein;protein_id=OFT02091.1;transl_table=11 KV790794.1 Genbank gene 7200 7583 . - . ID=gene-HMPREF3107_05075;Name=HMPREF3107_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05075 KV790794.1 Protein Homology CDS 7200 7583 . - 0 ID=cds-OFT02092.1;Parent=gene-HMPREF3107_05075;Dbxref=NCBI_GP:OFT02092.1;Name=OFT02092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770792.1;locus_tag=HMPREF3107_05075;product=epimerase;protein_id=OFT02092.1;transl_table=11 KV790794.1 Genbank gene 7992 8957 . + . ID=gene-HMPREF3107_05080;Name=HMPREF3107_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05080 KV790794.1 Protein Homology CDS 7992 8957 . + 0 ID=cds-OFT02093.1;Parent=gene-HMPREF3107_05080;Dbxref=NCBI_GP:OFT02093.1;Name=OFT02093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770795.1;locus_tag=HMPREF3107_05080;product=iron ABC transporter substrate-binding protein;protein_id=OFT02093.1;transl_table=11 KV790794.1 Genbank gene 9146 10114 . + . ID=gene-HMPREF3107_05085;Name=HMPREF3107_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05085 KV790794.1 Protein Homology CDS 9146 10114 . + 0 ID=cds-OFT02094.1;Parent=gene-HMPREF3107_05085;Dbxref=NCBI_GP:OFT02094.1;Name=OFT02094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201296.1;locus_tag=HMPREF3107_05085;product=iron ABC transporter permease;protein_id=OFT02094.1;transl_table=11 KV790794.1 Genbank gene 10131 11102 . + . ID=gene-HMPREF3107_05090;Name=HMPREF3107_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05090 KV790794.1 Protein Homology CDS 10131 11102 . + 0 ID=cds-OFT02095.1;Parent=gene-HMPREF3107_05090;Dbxref=NCBI_GP:OFT02095.1;Name=OFT02095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342216.1;locus_tag=HMPREF3107_05090;product=iron ABC transporter permease;protein_id=OFT02095.1;transl_table=11 KV790794.1 Genbank gene 11185 11943 . + . ID=gene-HMPREF3107_05095;Name=HMPREF3107_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05095 KV790794.1 Protein Homology CDS 11185 11943 . + 0 ID=cds-OFT02096.1;Parent=gene-HMPREF3107_05095;Dbxref=NCBI_GP:OFT02096.1;Name=OFT02096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678423.1;locus_tag=HMPREF3107_05095;product=iron ABC transporter ATP-binding protein;protein_id=OFT02096.1;transl_table=11 KV790794.1 Genbank gene 12045 12956 . + . ID=gene-HMPREF3107_05100;Name=HMPREF3107_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05100 KV790794.1 Protein Homology CDS 12045 12956 . + 0 ID=cds-OFT02097.1;Parent=gene-HMPREF3107_05100;Dbxref=NCBI_GP:OFT02097.1;Name=OFT02097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341018.1;locus_tag=HMPREF3107_05100;product=AAA family ATPase;protein_id=OFT02097.1;transl_table=11 KV790794.1 Genbank gene 12940 13887 . + . ID=gene-HMPREF3107_05105;Name=HMPREF3107_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05105 KV790794.1 Protein Homology CDS 12940 13887 . + 0 ID=cds-OFT02098.1;Parent=gene-HMPREF3107_05105;Dbxref=NCBI_GP:OFT02098.1;Name=OFT02098.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285583.1;locus_tag=HMPREF3107_05105;product=hypothetical protein;protein_id=OFT02098.1;transl_table=11 KV790794.1 Genbank gene 14004 15986 . + . ID=gene-HMPREF3107_05110;Name=HMPREF3107_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05110 KV790794.1 Protein Homology CDS 14004 15986 . + 0 ID=cds-OFT02099.1;Parent=gene-HMPREF3107_05110;Dbxref=NCBI_GP:OFT02099.1;Name=OFT02099.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427642.1;locus_tag=HMPREF3107_05110;product=transglutaminase;protein_id=OFT02099.1;transl_table=11 ##sequence-region KV790795.1 1 1179 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790795.1 Genbank region 1 1179 . + . ID=KV790795.1:1..1179;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790795.1 Genbank pseudogene 1 309 . + . ID=gene-HMPREF3107_05115;Name=HMPREF3107_05115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05115;pseudo=true KV790795.1 GeneMarkS+ CDS 1 309 . + 0 ID=cds-HMPREF3107_05115;Parent=gene-HMPREF3107_05115;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05115;product=hypothetical protein;pseudo=true;transl_table=11 KV790795.1 Genbank gene 294 743 . - . ID=gene-HMPREF3107_05120;Name=HMPREF3107_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05120 KV790795.1 Protein Homology CDS 294 743 . - 0 ID=cds-OFT02055.1;Parent=gene-HMPREF3107_05120;Dbxref=NCBI_GP:OFT02055.1;Name=OFT02055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771983.1;locus_tag=HMPREF3107_05120;product=hypothetical protein;protein_id=OFT02055.1;transl_table=11 KV790795.1 Genbank gene 867 1073 . + . ID=gene-HMPREF3107_05125;Name=HMPREF3107_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05125 KV790795.1 Protein Homology CDS 867 1073 . + 0 ID=cds-OFT02056.1;Parent=gene-HMPREF3107_05125;Dbxref=NCBI_GP:OFT02056.1;Name=OFT02056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688219.1;locus_tag=HMPREF3107_05125;product=hypothetical protein;protein_id=OFT02056.1;transl_table=11 ##sequence-region KV790796.1 1 74142 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790796.1 Genbank region 1 74142 . + . ID=KV790796.1:1..74142;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790796.1 Genbank gene 159 524 . - . ID=gene-HMPREF3107_05130;Name=HMPREF3107_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05130 KV790796.1 Protein Homology CDS 159 524 . - 0 ID=cds-OFT01996.1;Parent=gene-HMPREF3107_05130;Dbxref=NCBI_GP:OFT01996.1;Name=OFT01996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679470.1;locus_tag=HMPREF3107_05130;product=50S ribosomal protein L19;protein_id=OFT01996.1;transl_table=11 KV790796.1 Genbank gene 521 1291 . - . ID=gene-HMPREF3107_05135;Name=HMPREF3107_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05135 KV790796.1 Protein Homology CDS 521 1291 . - 0 ID=cds-OFT01997.1;Parent=gene-HMPREF3107_05135;Dbxref=NCBI_GP:OFT01997.1;Name=OFT01997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343853.1;locus_tag=HMPREF3107_05135;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=OFT01997.1;transl_table=11 KV790796.1 Genbank gene 1291 1800 . - . ID=gene-HMPREF3107_05140;Name=HMPREF3107_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05140 KV790796.1 Protein Homology CDS 1291 1800 . - 0 ID=cds-OFT01998.1;Parent=gene-HMPREF3107_05140;Dbxref=NCBI_GP:OFT01998.1;Name=OFT01998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748672.1;locus_tag=HMPREF3107_05140;product=ribosome maturation factor RimM;protein_id=OFT01998.1;transl_table=11 KV790796.1 Genbank gene 1807 2055 . - . ID=gene-HMPREF3107_05145;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF3107_05145 KV790796.1 Protein Homology CDS 1807 2055 . - 0 ID=cds-OFT01999.1;Parent=gene-HMPREF3107_05145;Dbxref=NCBI_GP:OFT01999.1;Name=OFT01999.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772296.1;locus_tag=HMPREF3107_05145;product=30S ribosomal protein S16;protein_id=OFT01999.1;transl_table=11 KV790796.1 Genbank gene 2134 4323 . - . ID=gene-HMPREF3107_05150;Name=HMPREF3107_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05150 KV790796.1 GeneMarkS+ CDS 2134 4323 . - 0 ID=cds-OFT02000.1;Parent=gene-HMPREF3107_05150;Dbxref=NCBI_GP:OFT02000.1;Name=OFT02000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05150;product=hypothetical protein;protein_id=OFT02000.1;transl_table=11 KV790796.1 Genbank gene 4477 4998 . - . ID=gene-HMPREF3107_05155;Name=HMPREF3107_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05155 KV790796.1 GeneMarkS+ CDS 4477 4998 . - 0 ID=cds-OFT02001.1;Parent=gene-HMPREF3107_05155;Dbxref=NCBI_GP:OFT02001.1;Name=OFT02001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05155;product=hypothetical protein;protein_id=OFT02001.1;transl_table=11 KV790796.1 Genbank gene 5074 6159 . - . ID=gene-HMPREF3107_05160;Name=HMPREF3107_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05160 KV790796.1 Protein Homology CDS 5074 6159 . - 0 ID=cds-OFT02002.1;Parent=gene-HMPREF3107_05160;Dbxref=NCBI_GP:OFT02002.1;Name=OFT02002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772292.1;locus_tag=HMPREF3107_05160;product=3-dehydroquinate synthase;protein_id=OFT02002.1;transl_table=11 KV790796.1 Genbank gene 6163 6681 . - . ID=gene-HMPREF3107_05165;Name=HMPREF3107_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05165 KV790796.1 Protein Homology CDS 6163 6681 . - 0 ID=cds-OFT02003.1;Parent=gene-HMPREF3107_05165;Dbxref=NCBI_GP:OFT02003.1;Name=OFT02003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772290.1;locus_tag=HMPREF3107_05165;product=shikimate kinase;protein_id=OFT02003.1;transl_table=11 KV790796.1 Genbank gene 6884 7450 . - . ID=gene-HMPREF3107_05170;Name=HMPREF3107_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05170 KV790796.1 GeneMarkS+ CDS 6884 7450 . - 0 ID=cds-OFT02004.1;Parent=gene-HMPREF3107_05170;Dbxref=NCBI_GP:OFT02004.1;Name=OFT02004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05170;product=hypothetical protein;protein_id=OFT02004.1;transl_table=11 KV790796.1 Genbank gene 7605 8258 . - . ID=gene-HMPREF3107_05175;Name=HMPREF3107_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05175 KV790796.1 Protein Homology CDS 7605 8258 . - 0 ID=cds-OFT02005.1;Parent=gene-HMPREF3107_05175;Dbxref=NCBI_GP:OFT02005.1;Name=OFT02005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772285.1;locus_tag=HMPREF3107_05175;product=hypothetical protein;protein_id=OFT02005.1;transl_table=11 KV790796.1 Genbank gene 8404 9744 . - . ID=gene-HMPREF3107_05180;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF3107_05180 KV790796.1 Protein Homology CDS 8404 9744 . - 0 ID=cds-OFT02006.1;Parent=gene-HMPREF3107_05180;Dbxref=NCBI_GP:OFT02006.1;Name=OFT02006.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772281.1;locus_tag=HMPREF3107_05180;product=phosphoglucosamine mutase;protein_id=OFT02006.1;transl_table=11 KV790796.1 Genbank gene 9838 10695 . - . ID=gene-HMPREF3107_05185;Name=HMPREF3107_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05185 KV790796.1 Protein Homology CDS 9838 10695 . - 0 ID=cds-OFT02007.1;Parent=gene-HMPREF3107_05185;Dbxref=NCBI_GP:OFT02007.1;Name=OFT02007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772279.1;locus_tag=HMPREF3107_05185;product=dihydropteroate synthase;protein_id=OFT02007.1;transl_table=11 KV790796.1 Genbank gene 10937 12916 . - . ID=gene-HMPREF3107_05190;Name=HMPREF3107_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05190 KV790796.1 Protein Homology CDS 10937 12916 . - 0 ID=cds-OFT02008.1;Parent=gene-HMPREF3107_05190;Dbxref=NCBI_GP:OFT02008.1;Name=OFT02008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772275.1;locus_tag=HMPREF3107_05190;product=cell division protein FtsH;protein_id=OFT02008.1;transl_table=11 KV790796.1 Genbank gene 12983 13603 . - . ID=gene-HMPREF3107_05195;Name=HMPREF3107_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05195 KV790796.1 Protein Homology CDS 12983 13603 . - 0 ID=cds-OFT02009.1;Parent=gene-HMPREF3107_05195;Dbxref=NCBI_GP:OFT02009.1;Name=OFT02009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688282.1;locus_tag=HMPREF3107_05195;product=23S rRNA methyltransferase;protein_id=OFT02009.1;transl_table=11 KV790796.1 Genbank gene 13699 14013 . + . ID=gene-HMPREF3107_05200;Name=HMPREF3107_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05200 KV790796.1 Protein Homology CDS 13699 14013 . + 0 ID=cds-OFT02010.1;Parent=gene-HMPREF3107_05200;Dbxref=NCBI_GP:OFT02010.1;Name=OFT02010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750834.1;locus_tag=HMPREF3107_05200;product=ribosome assembly protein YhbY;protein_id=OFT02010.1;transl_table=11 KV790796.1 Genbank gene 14074 14733 . - . ID=gene-HMPREF3107_05205;Name=HMPREF3107_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05205 KV790796.1 Protein Homology CDS 14074 14733 . - 0 ID=cds-OFT02011.1;Parent=gene-HMPREF3107_05205;Dbxref=NCBI_GP:OFT02011.1;Name=OFT02011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772270.1;locus_tag=HMPREF3107_05205;product=hypothetical protein;protein_id=OFT02011.1;transl_table=11 KV790796.1 Genbank gene 14899 16419 . - . ID=gene-HMPREF3107_05210;Name=HMPREF3107_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05210 KV790796.1 Protein Homology CDS 14899 16419 . - 0 ID=cds-OFT01872.1;Parent=gene-HMPREF3107_05210;Dbxref=NCBI_GP:OFT01872.1;Name=OFT01872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003790222.1;locus_tag=HMPREF3107_05210;product=acetyl-CoA hydrolase;protein_id=OFT01872.1;transl_table=11 KV790796.1 Genbank gene 16681 17502 . + . ID=gene-HMPREF3107_05215;Name=HMPREF3107_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05215 KV790796.1 Protein Homology CDS 16681 17502 . + 0 ID=cds-OFT01873.1;Parent=gene-HMPREF3107_05215;Dbxref=NCBI_GP:OFT01873.1;Name=OFT01873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772266.1;locus_tag=HMPREF3107_05215;product=peptidylprolyl isomerase;protein_id=OFT01873.1;transl_table=11 KV790796.1 Genbank gene 17661 18674 . + . ID=gene-HMPREF3107_05220;Name=HMPREF3107_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05220 KV790796.1 Protein Homology CDS 17661 18674 . + 0 ID=cds-OFT01874.1;Parent=gene-HMPREF3107_05220;Dbxref=NCBI_GP:OFT01874.1;Name=OFT01874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270027.1;locus_tag=HMPREF3107_05220;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=OFT01874.1;transl_table=11 KV790796.1 Genbank gene 18898 20868 . - . ID=gene-HMPREF3107_05225;Name=HMPREF3107_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05225 KV790796.1 Protein Homology CDS 18898 20868 . - 0 ID=cds-OFT01875.1;Parent=gene-HMPREF3107_05225;Dbxref=NCBI_GP:OFT01875.1;Name=OFT01875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747567.1;locus_tag=HMPREF3107_05225;product=TonB-dependent copper receptor;protein_id=OFT01875.1;transl_table=11 KV790796.1 Genbank gene 21329 22864 . + . ID=gene-HMPREF3107_05230;Name=HMPREF3107_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05230 KV790796.1 Protein Homology CDS 21329 22864 . + 0 ID=cds-OFT01876.1;Parent=gene-HMPREF3107_05230;Dbxref=NCBI_GP:OFT01876.1;Name=OFT01876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747487.1;locus_tag=HMPREF3107_05230;product=ATP-binding protein;protein_id=OFT01876.1;transl_table=11 KV790796.1 Genbank gene 22925 23566 . + . ID=gene-HMPREF3107_05235;Name=HMPREF3107_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05235 KV790796.1 Protein Homology CDS 22925 23566 . + 0 ID=cds-OFT01880.1;Parent=gene-HMPREF3107_05235;Dbxref=NCBI_GP:OFT01880.1;Name=OFT01880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343515.1;locus_tag=HMPREF3107_05235;product=hypothetical protein;protein_id=OFT01880.1;transl_table=11 KV790796.1 Genbank gene 23692 24531 . + . ID=gene-HMPREF3107_05240;Name=HMPREF3107_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05240 KV790796.1 Protein Homology CDS 23692 24531 . + 0 ID=cds-OFT01877.1;Parent=gene-HMPREF3107_05240;Dbxref=NCBI_GP:OFT01877.1;Name=OFT01877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772249.1;locus_tag=HMPREF3107_05240;product=phosphoserine phosphatase SerB;protein_id=OFT01877.1;transl_table=11 KV790796.1 Genbank gene 24847 26784 . + . ID=gene-HMPREF3107_05245;Name=HMPREF3107_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05245 KV790796.1 Protein Homology CDS 24847 26784 . + 0 ID=cds-OFT01878.1;Parent=gene-HMPREF3107_05245;Dbxref=NCBI_GP:OFT01878.1;Name=OFT01878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241797.1;locus_tag=HMPREF3107_05245;product=RNA polymerase sigma factor RpoD;protein_id=OFT01878.1;transl_table=11 KV790796.1 Genbank pseudogene 27059 27720 . + . ID=gene-HMPREF3107_05250;Name=HMPREF3107_05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05250;pseudo=true KV790796.1 Protein Homology CDS 27059 27720 . + 0 ID=cds-HMPREF3107_05250;Parent=gene-HMPREF3107_05250;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010981114.1;locus_tag=HMPREF3107_05250;product=transposase;pseudo=true;transl_table=11 KV790796.1 Genbank gene 28010 28393 . + . ID=gene-HMPREF3107_05255;Name=HMPREF3107_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05255 KV790796.1 Protein Homology CDS 28010 28393 . + 0 ID=cds-OFT01879.1;Parent=gene-HMPREF3107_05255;Dbxref=NCBI_GP:OFT01879.1;Name=OFT01879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741924.1;locus_tag=HMPREF3107_05255;product=hypothetical protein;protein_id=OFT01879.1;transl_table=11 KV790796.1 Genbank pseudogene 28470 28874 . - . ID=gene-HMPREF3107_05260;Name=HMPREF3107_05260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05260;pseudo=true KV790796.1 Protein Homology CDS 28470 28874 . - 1 ID=cds-HMPREF3107_05260;Parent=gene-HMPREF3107_05260;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581578.1;locus_tag=HMPREF3107_05260;product=transposase;pseudo=true;transl_table=11 KV790796.1 Genbank pseudogene 28895 29029 . - . ID=gene-HMPREF3107_05265;Name=HMPREF3107_05265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05265;pseudo=true KV790796.1 Protein Homology CDS 28895 29029 . - 0 ID=cds-HMPREF3107_05265;Parent=gene-HMPREF3107_05265;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252191.1;locus_tag=HMPREF3107_05265;product=transposase;pseudo=true;transl_table=11 KV790796.1 Genbank gene 29202 31118 . - . ID=gene-HMPREF3107_05270;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=HMPREF3107_05270 KV790796.1 Protein Homology CDS 29202 31118 . - 0 ID=cds-OFT01802.1;Parent=gene-HMPREF3107_05270;Dbxref=NCBI_GP:OFT01802.1;Name=OFT01802.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235944.1;locus_tag=HMPREF3107_05270;product=DNA mismatch repair protein MutL;protein_id=OFT01802.1;transl_table=11 KV790796.1 Genbank gene 31218 31844 . - . ID=gene-HMPREF3107_05275;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF3107_05275 KV790796.1 Protein Homology CDS 31218 31844 . - 0 ID=cds-OFT01803.1;Parent=gene-HMPREF3107_05275;Dbxref=NCBI_GP:OFT01803.1;Name=OFT01803.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K048.1;locus_tag=HMPREF3107_05275;product=uracil phosphoribosyltransferase;protein_id=OFT01803.1;transl_table=11 KV790796.1 Genbank gene 31941 32474 . + . ID=gene-HMPREF3107_05280;Name=HMPREF3107_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05280 KV790796.1 Protein Homology CDS 31941 32474 . + 0 ID=cds-OFT01804.1;Parent=gene-HMPREF3107_05280;Dbxref=NCBI_GP:OFT01804.1;Name=OFT01804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772238.1;locus_tag=HMPREF3107_05280;product=MarR family transcriptional regulator;protein_id=OFT01804.1;transl_table=11 KV790796.1 Genbank gene 32600 33214 . + . ID=gene-HMPREF3107_05285;Name=HMPREF3107_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05285 KV790796.1 Protein Homology CDS 32600 33214 . + 0 ID=cds-OFT01805.1;Parent=gene-HMPREF3107_05285;Dbxref=NCBI_GP:OFT01805.1;Name=OFT01805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286031.1;locus_tag=HMPREF3107_05285;product=transglycosylase;protein_id=OFT01805.1;transl_table=11 KV790796.1 Genbank pseudogene 33340 33528 . + . ID=gene-HMPREF3107_05290;Name=HMPREF3107_05290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05290;pseudo=true KV790796.1 Protein Homology CDS 33340 33528 . + 0 ID=cds-HMPREF3107_05290;Parent=gene-HMPREF3107_05290;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010378557.1;locus_tag=HMPREF3107_05290;product=hypothetical protein;pseudo=true;transl_table=11 KV790796.1 Genbank gene 34011 35093 . - . ID=gene-HMPREF3107_05295;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=HMPREF3107_05295 KV790796.1 Protein Homology CDS 34011 35093 . - 0 ID=cds-OFT01806.1;Parent=gene-HMPREF3107_05295;Dbxref=NCBI_GP:OFT01806.1;Name=OFT01806.1;gbkey=CDS;gene=glcE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018311522.1;locus_tag=HMPREF3107_05295;product=glycolate oxidase subunit GlcE;protein_id=OFT01806.1;transl_table=11 KV790796.1 Genbank gene 35462 38836 . - . ID=gene-HMPREF3107_05300;Name=HMPREF3107_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05300 KV790796.1 Protein Homology CDS 35462 38836 . - 0 ID=cds-OFT01838.1;Parent=gene-HMPREF3107_05300;Dbxref=NCBI_GP:OFT01838.1;Name=OFT01838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425703.1;locus_tag=HMPREF3107_05300;product=cell division protein FtsK;protein_id=OFT01838.1;transl_table=11 KV790796.1 Genbank gene 38961 39659 . + . ID=gene-HMPREF3107_05305;Name=HMPREF3107_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05305 KV790796.1 Protein Homology CDS 38961 39659 . + 0 ID=cds-OFT01839.1;Parent=gene-HMPREF3107_05305;Dbxref=NCBI_GP:OFT01839.1;Name=OFT01839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342536.1;locus_tag=HMPREF3107_05305;product=hypothetical protein;protein_id=OFT01839.1;transl_table=11 KV790796.1 Genbank gene 39656 40057 . + . ID=gene-HMPREF3107_05310;Name=HMPREF3107_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05310 KV790796.1 Protein Homology CDS 39656 40057 . + 0 ID=cds-OFT01807.1;Parent=gene-HMPREF3107_05310;Dbxref=NCBI_GP:OFT01807.1;Name=OFT01807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425705.1;locus_tag=HMPREF3107_05310;product=fluoride ion transporter CrcB;protein_id=OFT01807.1;transl_table=11 KV790796.1 Genbank gene 40175 40381 . + . ID=gene-HMPREF3107_05315;Name=HMPREF3107_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05315 KV790796.1 Protein Homology CDS 40175 40381 . + 0 ID=cds-OFT01808.1;Parent=gene-HMPREF3107_05315;Dbxref=NCBI_GP:OFT01808.1;Name=OFT01808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772222.1;locus_tag=HMPREF3107_05315;product=bacterioferritin;protein_id=OFT01808.1;transl_table=11 KV790796.1 Genbank gene 40514 41491 . + . ID=gene-HMPREF3107_05320;Name=HMPREF3107_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05320 KV790796.1 Protein Homology CDS 40514 41491 . + 0 ID=cds-OFT01809.1;Parent=gene-HMPREF3107_05320;Dbxref=NCBI_GP:OFT01809.1;Name=OFT01809.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283693.1;locus_tag=HMPREF3107_05320;product=DNA polymerase III subunit delta';protein_id=OFT01809.1;transl_table=11 KV790796.1 Genbank gene 41503 41889 . + . ID=gene-HMPREF3107_05325;Name=HMPREF3107_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05325 KV790796.1 Protein Homology CDS 41503 41889 . + 0 ID=cds-OFT01810.1;Parent=gene-HMPREF3107_05325;Dbxref=NCBI_GP:OFT01810.1;Name=OFT01810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772219.1;locus_tag=HMPREF3107_05325;product=pilus assembly protein;protein_id=OFT01810.1;transl_table=11 KV790796.1 Genbank gene 41957 42730 . + . ID=gene-HMPREF3107_05330;Name=HMPREF3107_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05330 KV790796.1 Protein Homology CDS 41957 42730 . + 0 ID=cds-OFT01811.1;Parent=gene-HMPREF3107_05330;Dbxref=NCBI_GP:OFT01811.1;Name=OFT01811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772218.1;locus_tag=HMPREF3107_05330;product=DNAase;protein_id=OFT01811.1;transl_table=11 KV790796.1 Genbank gene 42915 43496 . - . ID=gene-HMPREF3107_05335;Name=HMPREF3107_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05335 KV790796.1 GeneMarkS+ CDS 42915 43496 . - 0 ID=cds-OFT01812.1;Parent=gene-HMPREF3107_05335;Dbxref=NCBI_GP:OFT01812.1;Name=OFT01812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05335;product=hypothetical protein;protein_id=OFT01812.1;transl_table=11 KV790796.1 Genbank gene 43497 45503 . - . ID=gene-HMPREF3107_05340;Name=HMPREF3107_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05340 KV790796.1 Protein Homology CDS 43497 45503 . - 0 ID=cds-OFT01840.1;Parent=gene-HMPREF3107_05340;Dbxref=NCBI_GP:OFT01840.1;Name=OFT01840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519327.1;locus_tag=HMPREF3107_05340;product=arginine--tRNA ligase;protein_id=OFT01840.1;transl_table=11 KV790796.1 Genbank gene 45699 46613 . + . ID=gene-HMPREF3107_05345;Name=HMPREF3107_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05345 KV790796.1 Protein Homology CDS 45699 46613 . + 0 ID=cds-OFT01813.1;Parent=gene-HMPREF3107_05345;Dbxref=NCBI_GP:OFT01813.1;Name=OFT01813.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772213.1;locus_tag=HMPREF3107_05345;product=coproporphyrinogen III oxidase;protein_id=OFT01813.1;transl_table=11 KV790796.1 Genbank gene 46822 48375 . - . ID=gene-HMPREF3107_05350;Name=HMPREF3107_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05350 KV790796.1 Protein Homology CDS 46822 48375 . - 0 ID=cds-OFT01814.1;Parent=gene-HMPREF3107_05350;Dbxref=NCBI_GP:OFT01814.1;Name=OFT01814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519814.1;locus_tag=HMPREF3107_05350;product=hypothetical protein;protein_id=OFT01814.1;transl_table=11 KV790796.1 Genbank gene 48526 48717 . + . ID=gene-HMPREF3107_05355;Name=HMPREF3107_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05355 KV790796.1 Protein Homology CDS 48526 48717 . + 0 ID=cds-OFT01815.1;Parent=gene-HMPREF3107_05355;Dbxref=NCBI_GP:OFT01815.1;Name=OFT01815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772210.1;locus_tag=HMPREF3107_05355;product=hypothetical protein;protein_id=OFT01815.1;transl_table=11 KV790796.1 Genbank gene 48727 49395 . + . ID=gene-HMPREF3107_05360;Name=HMPREF3107_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05360 KV790796.1 Protein Homology CDS 48727 49395 . + 0 ID=cds-OFT01816.1;Parent=gene-HMPREF3107_05360;Dbxref=NCBI_GP:OFT01816.1;Name=OFT01816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213029.1;locus_tag=HMPREF3107_05360;product=methyltransferase;protein_id=OFT01816.1;transl_table=11 KV790796.1 Genbank gene 49438 50109 . + . ID=gene-HMPREF3107_05365;Name=HMPREF3107_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05365 KV790796.1 Protein Homology CDS 49438 50109 . + 0 ID=cds-OFT01817.1;Parent=gene-HMPREF3107_05365;Dbxref=NCBI_GP:OFT01817.1;Name=OFT01817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426661.1;locus_tag=HMPREF3107_05365;product=hypothetical protein;protein_id=OFT01817.1;transl_table=11 KV790796.1 Genbank gene 50554 53115 . + . ID=gene-HMPREF3107_05370;Name=HMPREF3107_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05370 KV790796.1 Protein Homology CDS 50554 53115 . + 0 ID=cds-OFT01841.1;Parent=gene-HMPREF3107_05370;Dbxref=NCBI_GP:OFT01841.1;Name=OFT01841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762906.1;locus_tag=HMPREF3107_05370;product=protein-P-II uridylyltransferase;protein_id=OFT01841.1;transl_table=11 KV790796.1 Genbank pseudogene 53196 54148 . + . ID=gene-HMPREF3107_05375;Name=HMPREF3107_05375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05375;pseudo=true KV790796.1 Protein Homology CDS 53196 54148 . + 0 ID=cds-HMPREF3107_05375;Parent=gene-HMPREF3107_05375;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772205.1;locus_tag=HMPREF3107_05375;product=hypothetical protein;pseudo=true;transl_table=11 KV790796.1 Genbank gene 54245 54451 . - . ID=gene-HMPREF3107_05380;Name=HMPREF3107_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05380 KV790796.1 GeneMarkS+ CDS 54245 54451 . - 0 ID=cds-OFT01818.1;Parent=gene-HMPREF3107_05380;Dbxref=NCBI_GP:OFT01818.1;Name=OFT01818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05380;product=hypothetical protein;protein_id=OFT01818.1;transl_table=11 KV790796.1 Genbank gene 54582 54926 . + . ID=gene-HMPREF3107_05385;Name=HMPREF3107_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05385 KV790796.1 GeneMarkS+ CDS 54582 54926 . + 0 ID=cds-OFT01819.1;Parent=gene-HMPREF3107_05385;Dbxref=NCBI_GP:OFT01819.1;Name=OFT01819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05385;product=hypothetical protein;protein_id=OFT01819.1;transl_table=11 KV790796.1 Genbank gene 55159 56874 . + . ID=gene-HMPREF3107_05390;Name=HMPREF3107_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05390 KV790796.1 Protein Homology CDS 55159 56874 . + 0 ID=cds-OFT01820.1;Parent=gene-HMPREF3107_05390;Dbxref=NCBI_GP:OFT01820.1;Name=OFT01820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283140.1;locus_tag=HMPREF3107_05390;product=K+/H+ antiporter;protein_id=OFT01820.1;transl_table=11 KV790796.1 Genbank gene 57259 57711 . - . ID=gene-HMPREF3107_05395;Name=HMPREF3107_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05395 KV790796.1 Protein Homology CDS 57259 57711 . - 0 ID=cds-OFT01821.1;Parent=gene-HMPREF3107_05395;Dbxref=NCBI_GP:OFT01821.1;Name=OFT01821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743490.1;locus_tag=HMPREF3107_05395;product=50S ribosomal protein L9;protein_id=OFT01821.1;transl_table=11 KV790796.1 Genbank gene 57728 57958 . - . ID=gene-HMPREF3107_05400;Name=HMPREF3107_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05400 KV790796.1 Protein Homology CDS 57728 57958 . - 0 ID=cds-OFT01822.1;Parent=gene-HMPREF3107_05400;Dbxref=NCBI_GP:OFT01822.1;Name=OFT01822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009120066.1;locus_tag=HMPREF3107_05400;product=30S ribosomal protein S18;protein_id=OFT01822.1;transl_table=11 KV790796.1 Genbank gene 57964 58260 . - . ID=gene-HMPREF3107_05405;Name=HMPREF3107_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05405 KV790796.1 Protein Homology CDS 57964 58260 . - 0 ID=cds-OFT01823.1;Parent=gene-HMPREF3107_05405;Dbxref=NCBI_GP:OFT01823.1;Name=OFT01823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519253.1;locus_tag=HMPREF3107_05405;product=primosomal replication protein N;protein_id=OFT01823.1;transl_table=11 KV790796.1 Genbank gene 58261 58626 . - . ID=gene-HMPREF3107_05410;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF3107_05410 KV790796.1 Protein Homology CDS 58261 58626 . - 0 ID=cds-OFT01824.1;Parent=gene-HMPREF3107_05410;Dbxref=NCBI_GP:OFT01824.1;Name=OFT01824.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427510.1;locus_tag=HMPREF3107_05410;product=30S ribosomal protein S6;protein_id=OFT01824.1;transl_table=11 KV790796.1 Genbank gene 58730 59035 . - . ID=gene-HMPREF3107_05415;Name=HMPREF3107_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05415 KV790796.1 Protein Homology CDS 58730 59035 . - 0 ID=cds-OFT01825.1;Parent=gene-HMPREF3107_05415;Dbxref=NCBI_GP:OFT01825.1;Name=OFT01825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772195.1;locus_tag=HMPREF3107_05415;product=[Fe-S]-binding protein;protein_id=OFT01825.1;transl_table=11 KV790796.1 Genbank gene 59121 60254 . - . ID=gene-HMPREF3107_05420;Name=HMPREF3107_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05420 KV790796.1 Protein Homology CDS 59121 60254 . - 0 ID=cds-OFT01826.1;Parent=gene-HMPREF3107_05420;Dbxref=NCBI_GP:OFT01826.1;Name=OFT01826.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017009633.1;locus_tag=HMPREF3107_05420;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=OFT01826.1;transl_table=11 KV790796.1 Genbank gene 60361 61878 . - . ID=gene-HMPREF3107_05425;Name=HMPREF3107_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05425 KV790796.1 Protein Homology CDS 60361 61878 . - 0 ID=cds-OFT01842.1;Parent=gene-HMPREF3107_05425;Dbxref=NCBI_GP:OFT01842.1;Name=OFT01842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237731.1;locus_tag=HMPREF3107_05425;product=Na+/H+ antiporter;protein_id=OFT01842.1;transl_table=11 KV790796.1 Genbank gene 62080 64359 . - . ID=gene-HMPREF3107_05430;Name=HMPREF3107_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05430 KV790796.1 Protein Homology CDS 62080 64359 . - 0 ID=cds-OFT01827.1;Parent=gene-HMPREF3107_05430;Dbxref=NCBI_GP:OFT01827.1;Name=OFT01827.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756856.1;locus_tag=HMPREF3107_05430;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=OFT01827.1;transl_table=11 KV790796.1 Genbank gene 64866 65051 . + . ID=gene-HMPREF3107_05435;Name=HMPREF3107_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05435 KV790796.1 Protein Homology CDS 64866 65051 . + 0 ID=cds-OFT01828.1;Parent=gene-HMPREF3107_05435;Dbxref=NCBI_GP:OFT01828.1;Name=OFT01828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464402.1;locus_tag=HMPREF3107_05435;product=hypothetical protein;protein_id=OFT01828.1;transl_table=11 KV790796.1 Genbank gene 65133 65774 . + . ID=gene-HMPREF3107_05440;Name=HMPREF3107_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05440 KV790796.1 Protein Homology CDS 65133 65774 . + 0 ID=cds-OFT01829.1;Parent=gene-HMPREF3107_05440;Dbxref=NCBI_GP:OFT01829.1;Name=OFT01829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JU81.1;locus_tag=HMPREF3107_05440;product=3-isopropylmalate dehydratase small subunit;protein_id=OFT01829.1;transl_table=11 KV790796.1 Genbank gene 65799 66143 . + . ID=gene-HMPREF3107_05445;Name=HMPREF3107_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05445 KV790796.1 GeneMarkS+ CDS 65799 66143 . + 0 ID=cds-OFT01830.1;Parent=gene-HMPREF3107_05445;Dbxref=NCBI_GP:OFT01830.1;Name=OFT01830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05445;product=hypothetical protein;protein_id=OFT01830.1;transl_table=11 KV790796.1 Genbank pseudogene 66156 66505 . + . ID=gene-HMPREF3107_05450;Name=HMPREF3107_05450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05450;pseudo=true KV790796.1 Protein Homology CDS 66156 66505 . + 0 ID=cds-HMPREF3107_05450;Parent=gene-HMPREF3107_05450;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772184.1;locus_tag=HMPREF3107_05450;product=hypothetical protein;pseudo=true;transl_table=11 KV790796.1 Genbank gene 66866 67468 . + . ID=gene-HMPREF3107_05455;Name=HMPREF3107_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05455 KV790796.1 GeneMarkS+ CDS 66866 67468 . + 0 ID=cds-OFT01831.1;Parent=gene-HMPREF3107_05455;Dbxref=NCBI_GP:OFT01831.1;Name=OFT01831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05455;product=hypothetical protein;protein_id=OFT01831.1;transl_table=11 KV790796.1 Genbank gene 67831 68499 . + . ID=gene-HMPREF3107_05460;Name=HMPREF3107_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05460 KV790796.1 Protein Homology CDS 67831 68499 . + 0 ID=cds-OFT01832.1;Parent=gene-HMPREF3107_05460;Dbxref=NCBI_GP:OFT01832.1;Name=OFT01832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002670067.1;locus_tag=HMPREF3107_05460;product=hypothetical protein;protein_id=OFT01832.1;transl_table=11 KV790796.1 Genbank gene 68538 68990 . + . ID=gene-HMPREF3107_05465;Name=HMPREF3107_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05465 KV790796.1 Protein Homology CDS 68538 68990 . + 0 ID=cds-OFT01833.1;Parent=gene-HMPREF3107_05465;Dbxref=NCBI_GP:OFT01833.1;Name=OFT01833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772174.1;locus_tag=HMPREF3107_05465;product=YhcH/YjgK/YiaL family protein;protein_id=OFT01833.1;transl_table=11 KV790796.1 Genbank gene 69001 69864 . + . ID=gene-HMPREF3107_05470;Name=HMPREF3107_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05470 KV790796.1 GeneMarkS+ CDS 69001 69864 . + 0 ID=cds-OFT01834.1;Parent=gene-HMPREF3107_05470;Dbxref=NCBI_GP:OFT01834.1;Name=OFT01834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05470;product=hypothetical protein;protein_id=OFT01834.1;transl_table=11 KV790796.1 Genbank gene 69974 71044 . + . ID=gene-HMPREF3107_05475;Name=HMPREF3107_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05475 KV790796.1 Protein Homology CDS 69974 71044 . + 0 ID=cds-OFT01835.1;Parent=gene-HMPREF3107_05475;Dbxref=NCBI_GP:OFT01835.1;Name=OFT01835.1;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311437.1;locus_tag=HMPREF3107_05475;product=3-isopropylmalate dehydrogenase;protein_id=OFT01835.1;transl_table=11 KV790796.1 Genbank gene 71152 71907 . + . ID=gene-HMPREF3107_05480;Name=HMPREF3107_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05480 KV790796.1 GeneMarkS+ CDS 71152 71907 . + 0 ID=cds-OFT01836.1;Parent=gene-HMPREF3107_05480;Dbxref=NCBI_GP:OFT01836.1;Name=OFT01836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05480;product=hypothetical protein;protein_id=OFT01836.1;transl_table=11 KV790796.1 Genbank gene 72120 73979 . + . ID=gene-HMPREF3107_05485;Name=HMPREF3107_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05485 KV790796.1 Protein Homology CDS 72120 73979 . + 0 ID=cds-OFT01837.1;Parent=gene-HMPREF3107_05485;Dbxref=NCBI_GP:OFT01837.1;Name=OFT01837.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448882.1;locus_tag=HMPREF3107_05485;product=dihydroxy-acid dehydratase;protein_id=OFT01837.1;transl_table=11 ##sequence-region KV790797.1 1 44792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790797.1 Genbank region 1 44792 . + . ID=KV790797.1:1..44792;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790797.1 Genbank gene 693 1172 . + . ID=gene-HMPREF3107_05490;Name=HMPREF3107_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05490 KV790797.1 Protein Homology CDS 693 1172 . + 0 ID=cds-OFT01738.1;Parent=gene-HMPREF3107_05490;Dbxref=NCBI_GP:OFT01738.1;Name=OFT01738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783611.1;locus_tag=HMPREF3107_05490;product=hypothetical protein;protein_id=OFT01738.1;transl_table=11 KV790797.1 Genbank gene 1285 2865 . + . ID=gene-HMPREF3107_05495;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=HMPREF3107_05495 KV790797.1 Protein Homology CDS 1285 2865 . + 0 ID=cds-OFT01739.1;Parent=gene-HMPREF3107_05495;Dbxref=NCBI_GP:OFT01739.1;Name=OFT01739.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448532.1;locus_tag=HMPREF3107_05495;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=OFT01739.1;transl_table=11 KV790797.1 Genbank pseudogene 3600 5057 . - . ID=gene-HMPREF3107_05500;Name=HMPREF3107_05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05500;pseudo=true KV790797.1 Protein Homology CDS 3600 5057 . - 0 ID=cds-HMPREF3107_05500;Parent=gene-HMPREF3107_05500;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768676.1;locus_tag=HMPREF3107_05500;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 KV790797.1 Genbank gene 5345 5689 . + . ID=gene-HMPREF3107_05505;Name=HMPREF3107_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05505 KV790797.1 Protein Homology CDS 5345 5689 . + 0 ID=cds-OFT01740.1;Parent=gene-HMPREF3107_05505;Dbxref=NCBI_GP:OFT01740.1;Name=OFT01740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743670.1;locus_tag=HMPREF3107_05505;product=hypothetical protein;protein_id=OFT01740.1;transl_table=11 KV790797.1 Genbank gene 5736 6203 . + . ID=gene-HMPREF3107_05510;Name=HMPREF3107_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05510 KV790797.1 Protein Homology CDS 5736 6203 . + 0 ID=cds-OFT01741.1;Parent=gene-HMPREF3107_05510;Dbxref=NCBI_GP:OFT01741.1;Name=OFT01741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687486.1;locus_tag=HMPREF3107_05510;product=hypothetical protein;protein_id=OFT01741.1;transl_table=11 KV790797.1 Genbank gene 6436 6888 . + . ID=gene-HMPREF3107_05515;Name=HMPREF3107_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05515 KV790797.1 Protein Homology CDS 6436 6888 . + 0 ID=cds-OFT01742.1;Parent=gene-HMPREF3107_05515;Dbxref=NCBI_GP:OFT01742.1;Name=OFT01742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009502116.1;locus_tag=HMPREF3107_05515;product=nuclear export factor GLE1;protein_id=OFT01742.1;transl_table=11 KV790797.1 Genbank gene 7412 8074 . - . ID=gene-HMPREF3107_05520;Name=HMPREF3107_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05520 KV790797.1 Protein Homology CDS 7412 8074 . - 0 ID=cds-OFT01743.1;Parent=gene-HMPREF3107_05520;Dbxref=NCBI_GP:OFT01743.1;Name=OFT01743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015431919.1;locus_tag=HMPREF3107_05520;product=hypothetical protein;protein_id=OFT01743.1;transl_table=11 KV790797.1 Genbank gene 8096 8512 . - . ID=gene-HMPREF3107_05525;Name=HMPREF3107_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05525 KV790797.1 GeneMarkS+ CDS 8096 8512 . - 0 ID=cds-OFT01744.1;Parent=gene-HMPREF3107_05525;Dbxref=NCBI_GP:OFT01744.1;Name=OFT01744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05525;product=hypothetical protein;protein_id=OFT01744.1;transl_table=11 KV790797.1 Genbank gene 8705 10912 . - . ID=gene-HMPREF3107_05530;Name=HMPREF3107_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05530 KV790797.1 Protein Homology CDS 8705 10912 . - 0 ID=cds-OFT01745.1;Parent=gene-HMPREF3107_05530;Dbxref=NCBI_GP:OFT01745.1;Name=OFT01745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215598.1;locus_tag=HMPREF3107_05530;product=DNA helicase II;protein_id=OFT01745.1;transl_table=11 KV790797.1 Genbank gene 11021 11473 . - . ID=gene-HMPREF3107_05535;Name=HMPREF3107_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05535 KV790797.1 Protein Homology CDS 11021 11473 . - 0 ID=cds-OFT01746.1;Parent=gene-HMPREF3107_05535;Dbxref=NCBI_GP:OFT01746.1;Name=OFT01746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771885.1;locus_tag=HMPREF3107_05535;product=peptidylprolyl isomerase;protein_id=OFT01746.1;transl_table=11 KV790797.1 Genbank gene 11483 12895 . - . ID=gene-HMPREF3107_05540;Name=HMPREF3107_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05540 KV790797.1 Protein Homology CDS 11483 12895 . - 0 ID=cds-OFT01747.1;Parent=gene-HMPREF3107_05540;Dbxref=NCBI_GP:OFT01747.1;Name=OFT01747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771882.1;locus_tag=HMPREF3107_05540;product=peptidase S13;protein_id=OFT01747.1;transl_table=11 KV790797.1 Genbank gene 12968 14473 . - . ID=gene-HMPREF3107_05545;Name=HMPREF3107_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05545 KV790797.1 Protein Homology CDS 12968 14473 . - 0 ID=cds-OFT01748.1;Parent=gene-HMPREF3107_05545;Dbxref=NCBI_GP:OFT01748.1;Name=OFT01748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285177.1;locus_tag=HMPREF3107_05545;product=signal recognition particle-docking protein FtsY;protein_id=OFT01748.1;transl_table=11 KV790797.1 Genbank gene 14490 14708 . - . ID=gene-HMPREF3107_05550;Name=HMPREF3107_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05550 KV790797.1 Protein Homology CDS 14490 14708 . - 0 ID=cds-OFT01749.1;Parent=gene-HMPREF3107_05550;Dbxref=NCBI_GP:OFT01749.1;Name=OFT01749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771878.1;locus_tag=HMPREF3107_05550;product=phosphoglucosamine mutase;protein_id=OFT01749.1;transl_table=11 KV790797.1 Genbank gene 14864 16225 . + . ID=gene-HMPREF3107_05555;Name=HMPREF3107_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05555 KV790797.1 Protein Homology CDS 14864 16225 . + 0 ID=cds-OFT01750.1;Parent=gene-HMPREF3107_05555;Dbxref=NCBI_GP:OFT01750.1;Name=OFT01750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771877.1;locus_tag=HMPREF3107_05555;product=peptidase M16;protein_id=OFT01750.1;transl_table=11 KV790797.1 Genbank gene 16222 17538 . + . ID=gene-HMPREF3107_05560;Name=HMPREF3107_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05560 KV790797.1 Protein Homology CDS 16222 17538 . + 0 ID=cds-OFT01751.1;Parent=gene-HMPREF3107_05560;Dbxref=NCBI_GP:OFT01751.1;Name=OFT01751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175128.1;locus_tag=HMPREF3107_05560;product=zinc protease;protein_id=OFT01751.1;transl_table=11 KV790797.1 Genbank gene 18001 20280 . - . ID=gene-HMPREF3107_05565;Name=HMPREF3107_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05565 KV790797.1 Protein Homology CDS 18001 20280 . - 0 ID=cds-OFT01752.1;Parent=gene-HMPREF3107_05565;Dbxref=NCBI_GP:OFT01752.1;Name=OFT01752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771869.1;locus_tag=HMPREF3107_05565;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=OFT01752.1;transl_table=11 KV790797.1 Genbank gene 20393 20704 . + . ID=gene-HMPREF3107_05570;Name=HMPREF3107_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05570 KV790797.1 GeneMarkS+ CDS 20393 20704 . + 0 ID=cds-OFT01753.1;Parent=gene-HMPREF3107_05570;Dbxref=NCBI_GP:OFT01753.1;Name=OFT01753.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05570;product=hypothetical protein;protein_id=OFT01753.1;transl_table=11 KV790797.1 Genbank gene 20997 21671 . - . ID=gene-HMPREF3107_05575;Name=HMPREF3107_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05575 KV790797.1 Protein Homology CDS 20997 21671 . - 0 ID=cds-OFT01756.1;Parent=gene-HMPREF3107_05575;Dbxref=NCBI_GP:OFT01756.1;Name=OFT01756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771861.1;locus_tag=HMPREF3107_05575;product=hypothetical protein;protein_id=OFT01756.1;transl_table=11 KV790797.1 Genbank gene 22013 23689 . - . ID=gene-HMPREF3107_05580;Name=HMPREF3107_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05580 KV790797.1 Protein Homology CDS 22013 23689 . - 0 ID=cds-OFT01754.1;Parent=gene-HMPREF3107_05580;Dbxref=NCBI_GP:OFT01754.1;Name=OFT01754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742723.1;locus_tag=HMPREF3107_05580;product=formate--tetrahydrofolate ligase;protein_id=OFT01754.1;transl_table=11 KV790797.1 Genbank gene 24019 24336 . - . ID=gene-HMPREF3107_05585;Name=HMPREF3107_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05585 KV790797.1 GeneMarkS+ CDS 24019 24336 . - 0 ID=cds-OFT01755.1;Parent=gene-HMPREF3107_05585;Dbxref=NCBI_GP:OFT01755.1;Name=OFT01755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05585;product=hypothetical protein;protein_id=OFT01755.1;transl_table=11 KV790797.1 Genbank pseudogene 24390 24659 . - . ID=gene-HMPREF3107_05590;Name=HMPREF3107_05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05590;pseudo=true KV790797.1 GeneMarkS+ CDS 24390 24659 . - 0 ID=cds-HMPREF3107_05590;Parent=gene-HMPREF3107_05590;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05590;product=hypothetical protein;pseudo=true;transl_table=11 KV790797.1 Genbank pseudogene 24970 25197 . - . ID=gene-HMPREF3107_05595;Name=HMPREF3107_05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05595;pseudo=true KV790797.1 Protein Homology CDS 24970 25197 . - 0 ID=cds-HMPREF3107_05595;Parent=gene-HMPREF3107_05595;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342191.1;locus_tag=HMPREF3107_05595;product=hypothetical protein;pseudo=true;transl_table=11 KV790797.1 Genbank gene 25647 26540 . - . ID=gene-HMPREF3107_05600;Name=HMPREF3107_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05600 KV790797.1 Protein Homology CDS 25647 26540 . - 0 ID=cds-OFT01651.1;Parent=gene-HMPREF3107_05600;Dbxref=NCBI_GP:OFT01651.1;Name=OFT01651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115302.1;locus_tag=HMPREF3107_05600;product=geranyl transferase;protein_id=OFT01651.1;transl_table=11 KV790797.1 Genbank gene 26527 26757 . - . ID=gene-HMPREF3107_05605;Name=HMPREF3107_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05605 KV790797.1 Protein Homology CDS 26527 26757 . - 0 ID=cds-OFT01652.1;Parent=gene-HMPREF3107_05605;Dbxref=NCBI_GP:OFT01652.1;Name=OFT01652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JSM1.1;locus_tag=HMPREF3107_05605;product=exodeoxyribonuclease VII small subunit;protein_id=OFT01652.1;transl_table=11 KV790797.1 Genbank gene 26949 28319 . + . ID=gene-HMPREF3107_05610;Name=HMPREF3107_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05610 KV790797.1 Protein Homology CDS 26949 28319 . + 0 ID=cds-OFT01653.1;Parent=gene-HMPREF3107_05610;Dbxref=NCBI_GP:OFT01653.1;Name=OFT01653.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245843.1;locus_tag=HMPREF3107_05610;product=adenylosuccinate lyase;protein_id=OFT01653.1;transl_table=11 KV790797.1 Genbank gene 28586 29797 . + . ID=gene-HMPREF3107_05615;Name=HMPREF3107_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05615 KV790797.1 Protein Homology CDS 28586 29797 . + 0 ID=cds-OFT01654.1;Parent=gene-HMPREF3107_05615;Dbxref=NCBI_GP:OFT01654.1;Name=OFT01654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772541.1;locus_tag=HMPREF3107_05615;product=FAD-dependent oxidoreductase;protein_id=OFT01654.1;transl_table=11 KV790797.1 Genbank gene 29910 30974 . + . ID=gene-HMPREF3107_05620;Name=HMPREF3107_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05620 KV790797.1 Protein Homology CDS 29910 30974 . + 0 ID=cds-OFT01655.1;Parent=gene-HMPREF3107_05620;Dbxref=NCBI_GP:OFT01655.1;Name=OFT01655.1;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219833.1;locus_tag=HMPREF3107_05620;product=fructose-1%2C6-bisphosphate aldolase;protein_id=OFT01655.1;transl_table=11 KV790797.1 Genbank gene 31245 31889 . + . ID=gene-HMPREF3107_05625;Name=HMPREF3107_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05625 KV790797.1 Protein Homology CDS 31245 31889 . + 0 ID=cds-OFT01656.1;Parent=gene-HMPREF3107_05625;Dbxref=NCBI_GP:OFT01656.1;Name=OFT01656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272311.1;locus_tag=HMPREF3107_05625;product=50S ribosomal protein L3;protein_id=OFT01656.1;transl_table=11 KV790797.1 Genbank gene 31889 32509 . + . ID=gene-HMPREF3107_05630;Name=HMPREF3107_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05630 KV790797.1 Protein Homology CDS 31889 32509 . + 0 ID=cds-OFT01657.1;Parent=gene-HMPREF3107_05630;Dbxref=NCBI_GP:OFT01657.1;Name=OFT01657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P61056.1;locus_tag=HMPREF3107_05630;product=50S ribosomal protein L4;protein_id=OFT01657.1;transl_table=11 KV790797.1 Genbank gene 32536 33381 . - . ID=gene-HMPREF3107_05635;Name=HMPREF3107_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05635 KV790797.1 GeneMarkS+ CDS 32536 33381 . - 0 ID=cds-OFT01658.1;Parent=gene-HMPREF3107_05635;Dbxref=NCBI_GP:OFT01658.1;Name=OFT01658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05635;product=hypothetical protein;protein_id=OFT01658.1;transl_table=11 KV790797.1 Genbank gene 33955 34284 . + . ID=gene-HMPREF3107_05640;Name=HMPREF3107_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05640 KV790797.1 Protein Homology CDS 33955 34284 . + 0 ID=cds-OFT01659.1;Parent=gene-HMPREF3107_05640;Dbxref=NCBI_GP:OFT01659.1;Name=OFT01659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795898.1;locus_tag=HMPREF3107_05640;product=50S ribosomal protein L22;protein_id=OFT01659.1;transl_table=11 KV790797.1 Genbank gene 34294 34989 . + . ID=gene-HMPREF3107_05645;Name=HMPREF3107_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05645 KV790797.1 Protein Homology CDS 34294 34989 . + 0 ID=cds-OFT01660.1;Parent=gene-HMPREF3107_05645;Dbxref=NCBI_GP:OFT01660.1;Name=OFT01660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707143.1;locus_tag=HMPREF3107_05645;product=30S ribosomal protein S3;protein_id=OFT01660.1;transl_table=11 KV790797.1 Genbank gene 34973 35389 . + . ID=gene-HMPREF3107_05650;Name=HMPREF3107_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05650 KV790797.1 Protein Homology CDS 34973 35389 . + 0 ID=cds-OFT01661.1;Parent=gene-HMPREF3107_05650;Dbxref=NCBI_GP:OFT01661.1;Name=OFT01661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008955643.1;locus_tag=HMPREF3107_05650;product=50S ribosomal protein L16;protein_id=OFT01661.1;transl_table=11 KV790797.1 Genbank gene 35389 35580 . + . ID=gene-HMPREF3107_05655;Name=HMPREF3107_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05655 KV790797.1 Protein Homology CDS 35389 35580 . + 0 ID=cds-OFT01662.1;Parent=gene-HMPREF3107_05655;Dbxref=NCBI_GP:OFT01662.1;Name=OFT01662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175233.1;locus_tag=HMPREF3107_05655;product=50S ribosomal protein L29;protein_id=OFT01662.1;transl_table=11 KV790797.1 Genbank gene 35580 35843 . + . ID=gene-HMPREF3107_05660;Name=HMPREF3107_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05660 KV790797.1 Protein Homology CDS 35580 35843 . + 0 ID=cds-OFT01663.1;Parent=gene-HMPREF3107_05660;Dbxref=NCBI_GP:OFT01663.1;Name=OFT01663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175232.1;locus_tag=HMPREF3107_05660;product=30S ribosomal protein S17;protein_id=OFT01663.1;transl_table=11 KV790797.1 Genbank gene 36071 36439 . + . ID=gene-HMPREF3107_05665;Name=HMPREF3107_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05665 KV790797.1 Protein Homology CDS 36071 36439 . + 0 ID=cds-OFT01664.1;Parent=gene-HMPREF3107_05665;Dbxref=NCBI_GP:OFT01664.1;Name=OFT01664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642316.1;locus_tag=HMPREF3107_05665;product=50S ribosomal protein L14;protein_id=OFT01664.1;transl_table=11 KV790797.1 Genbank gene 36451 36774 . + . ID=gene-HMPREF3107_05670;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF3107_05670 KV790797.1 Protein Homology CDS 36451 36774 . + 0 ID=cds-OFT01665.1;Parent=gene-HMPREF3107_05670;Dbxref=NCBI_GP:OFT01665.1;Name=OFT01665.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:SwissProt:P60732.1;locus_tag=HMPREF3107_05670;product=50S ribosomal protein L24;protein_id=OFT01665.1;transl_table=11 KV790797.1 Genbank gene 36784 37323 . + . ID=gene-HMPREF3107_05675;Name=HMPREF3107_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05675 KV790797.1 Protein Homology CDS 36784 37323 . + 0 ID=cds-OFT01666.1;Parent=gene-HMPREF3107_05675;Dbxref=NCBI_GP:OFT01666.1;Name=OFT01666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008955648.1;locus_tag=HMPREF3107_05675;product=50S ribosomal protein L5;protein_id=OFT01666.1;transl_table=11 KV790797.1 Genbank gene 37326 37631 . + . ID=gene-HMPREF3107_05680;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF3107_05680 KV790797.1 Protein Homology CDS 37326 37631 . + 0 ID=cds-OFT01667.1;Parent=gene-HMPREF3107_05680;Dbxref=NCBI_GP:OFT01667.1;Name=OFT01667.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the Legionella proteins appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006464921.1;locus_tag=HMPREF3107_05680;product=30S ribosomal protein S14;protein_id=OFT01667.1;transl_table=11 KV790797.1 Genbank gene 37646 38038 . + . ID=gene-HMPREF3107_05685;Name=HMPREF3107_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05685 KV790797.1 Protein Homology CDS 37646 38038 . + 0 ID=cds-OFT01668.1;Parent=gene-HMPREF3107_05685;Dbxref=NCBI_GP:OFT01668.1;Name=OFT01668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66628.1;locus_tag=HMPREF3107_05685;product=30S ribosomal protein S8;protein_id=OFT01668.1;transl_table=11 KV790797.1 Genbank gene 38052 38585 . + . ID=gene-HMPREF3107_05690;Name=HMPREF3107_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05690 KV790797.1 Protein Homology CDS 38052 38585 . + 0 ID=cds-OFT01669.1;Parent=gene-HMPREF3107_05690;Dbxref=NCBI_GP:OFT01669.1;Name=OFT01669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520191.1;locus_tag=HMPREF3107_05690;product=50S ribosomal protein L6;protein_id=OFT01669.1;transl_table=11 KV790797.1 Genbank gene 38599 38952 . + . ID=gene-HMPREF3107_05695;Name=HMPREF3107_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05695 KV790797.1 Protein Homology CDS 38599 38952 . + 0 ID=cds-OFT01670.1;Parent=gene-HMPREF3107_05695;Dbxref=NCBI_GP:OFT01670.1;Name=OFT01670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5U3.1;locus_tag=HMPREF3107_05695;product=50S ribosomal protein L18;protein_id=OFT01670.1;transl_table=11 KV790797.1 Genbank gene 38970 39488 . + . ID=gene-HMPREF3107_05700;Name=HMPREF3107_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05700 KV790797.1 Protein Homology CDS 38970 39488 . + 0 ID=cds-OFT01671.1;Parent=gene-HMPREF3107_05700;Dbxref=NCBI_GP:OFT01671.1;Name=OFT01671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684704.1;locus_tag=HMPREF3107_05700;product=30S ribosomal protein S5;protein_id=OFT01671.1;transl_table=11 KV790797.1 Genbank gene 39669 40103 . + . ID=gene-HMPREF3107_05705;Name=HMPREF3107_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05705 KV790797.1 Protein Homology CDS 39669 40103 . + 0 ID=cds-OFT01672.1;Parent=gene-HMPREF3107_05705;Dbxref=NCBI_GP:OFT01672.1;Name=OFT01672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175229.1;locus_tag=HMPREF3107_05705;product=50S ribosomal protein L15;protein_id=OFT01672.1;transl_table=11 KV790797.1 Genbank gene 40117 41412 . + . ID=gene-HMPREF3107_05710;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF3107_05710 KV790797.1 Protein Homology CDS 40117 41412 . + 0 ID=cds-OFT01673.1;Parent=gene-HMPREF3107_05710;Dbxref=NCBI_GP:OFT01673.1;Name=OFT01673.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175228.1;locus_tag=HMPREF3107_05710;product=preprotein translocase subunit SecY;protein_id=OFT01673.1;transl_table=11 KV790797.1 Genbank gene 41836 42198 . + . ID=gene-HMPREF3107_05715;Name=HMPREF3107_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05715 KV790797.1 Protein Homology CDS 41836 42198 . + 0 ID=cds-OFT01674.1;Parent=gene-HMPREF3107_05715;Dbxref=NCBI_GP:OFT01674.1;Name=OFT01674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66386.1;locus_tag=HMPREF3107_05715;product=30S ribosomal protein S13;protein_id=OFT01674.1;transl_table=11 KV790797.1 Genbank gene 42243 42470 . + . ID=gene-HMPREF3107_05720;Name=HMPREF3107_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05720 KV790797.1 GeneMarkS+ CDS 42243 42470 . + 0 ID=cds-OFT01675.1;Parent=gene-HMPREF3107_05720;Dbxref=NCBI_GP:OFT01675.1;Name=OFT01675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05720;product=hypothetical protein;protein_id=OFT01675.1;transl_table=11 KV790797.1 Genbank gene 42634 43254 . + . ID=gene-HMPREF3107_05725;Name=HMPREF3107_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05725 KV790797.1 Protein Homology CDS 42634 43254 . + 0 ID=cds-OFT01676.1;Parent=gene-HMPREF3107_05725;Dbxref=NCBI_GP:OFT01676.1;Name=OFT01676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282443.1;locus_tag=HMPREF3107_05725;product=30S ribosomal protein S4;protein_id=OFT01676.1;transl_table=11 KV790797.1 Genbank gene 43281 44264 . + . ID=gene-HMPREF3107_05730;Name=HMPREF3107_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05730 KV790797.1 Protein Homology CDS 43281 44264 . + 0 ID=cds-OFT01677.1;Parent=gene-HMPREF3107_05730;Dbxref=NCBI_GP:OFT01677.1;Name=OFT01677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313011.1;locus_tag=HMPREF3107_05730;product=DNA-directed RNA polymerase subunit alpha;protein_id=OFT01677.1;transl_table=11 ##sequence-region KV790798.1 1 15291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790798.1 Genbank region 1 15291 . + . ID=KV790798.1:1..15291;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790798.1 Genbank gene 234 1154 . + . ID=gene-HMPREF3107_05735;Name=HMPREF3107_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05735 KV790798.1 Protein Homology CDS 234 1154 . + 0 ID=cds-OFT01585.1;Parent=gene-HMPREF3107_05735;Dbxref=NCBI_GP:OFT01585.1;Name=OFT01585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677959.1;locus_tag=HMPREF3107_05735;product=aspartate carbamoyltransferase;protein_id=OFT01585.1;transl_table=11 KV790798.1 Genbank gene 1165 1623 . + . ID=gene-HMPREF3107_05740;Name=HMPREF3107_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05740 KV790798.1 Protein Homology CDS 1165 1623 . + 0 ID=cds-OFT01586.1;Parent=gene-HMPREF3107_05740;Dbxref=NCBI_GP:OFT01586.1;Name=OFT01586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245387.1;locus_tag=HMPREF3107_05740;product=aspartate carbamoyltransferase regulatory subunit;protein_id=OFT01586.1;transl_table=11 KV790798.1 Genbank gene 1743 2300 . + . ID=gene-HMPREF3107_05745;Name=HMPREF3107_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05745 KV790798.1 Protein Homology CDS 1743 2300 . + 0 ID=cds-OFT01587.1;Parent=gene-HMPREF3107_05745;Dbxref=NCBI_GP:OFT01587.1;Name=OFT01587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761686.1;locus_tag=HMPREF3107_05745;product=oligoribonuclease;protein_id=OFT01587.1;transl_table=11 KV790798.1 Genbank gene 2365 3414 . + . ID=gene-HMPREF3107_05750;Name=HMPREF3107_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05750 KV790798.1 Protein Homology CDS 2365 3414 . + 0 ID=cds-OFT01588.1;Parent=gene-HMPREF3107_05750;Dbxref=NCBI_GP:OFT01588.1;Name=OFT01588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776532.1;locus_tag=HMPREF3107_05750;product=serine/threonine protein phosphatase;protein_id=OFT01588.1;transl_table=11 KV790798.1 Genbank gene 3684 4580 . - . ID=gene-HMPREF3107_05755;Name=HMPREF3107_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05755 KV790798.1 Protein Homology CDS 3684 4580 . - 0 ID=cds-OFT01589.1;Parent=gene-HMPREF3107_05755;Dbxref=NCBI_GP:OFT01589.1;Name=OFT01589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761911.1;locus_tag=HMPREF3107_05755;product=recombinase XerC;protein_id=OFT01589.1;transl_table=11 KV790798.1 Genbank gene 4644 5861 . - . ID=gene-HMPREF3107_05760;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=HMPREF3107_05760 KV790798.1 Protein Homology CDS 4644 5861 . - 0 ID=cds-OFT01590.1;Parent=gene-HMPREF3107_05760;Dbxref=NCBI_GP:OFT01590.1;Name=OFT01590.1;Note=bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate;gbkey=CDS;gene=argJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742788.1;locus_tag=HMPREF3107_05760;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=OFT01590.1;transl_table=11 KV790798.1 Genbank gene 6046 7107 . - . ID=gene-HMPREF3107_05765;Name=HMPREF3107_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05765 KV790798.1 GeneMarkS+ CDS 6046 7107 . - 0 ID=cds-OFT01591.1;Parent=gene-HMPREF3107_05765;Dbxref=NCBI_GP:OFT01591.1;Name=OFT01591.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05765;product=hypothetical protein;protein_id=OFT01591.1;transl_table=11 KV790798.1 Genbank gene 7306 8127 . - . ID=gene-HMPREF3107_05770;Name=HMPREF3107_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05770 KV790798.1 Protein Homology CDS 7306 8127 . - 0 ID=cds-OFT01592.1;Parent=gene-HMPREF3107_05770;Dbxref=NCBI_GP:OFT01592.1;Name=OFT01592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771311.1;locus_tag=HMPREF3107_05770;product=NADPH-dependent ferric siderophore reductase;protein_id=OFT01592.1;transl_table=11 KV790798.1 Genbank gene 8298 8963 . - . ID=gene-HMPREF3107_05775;Name=HMPREF3107_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05775 KV790798.1 Protein Homology CDS 8298 8963 . - 0 ID=cds-OFT01593.1;Parent=gene-HMPREF3107_05775;Dbxref=NCBI_GP:OFT01593.1;Name=OFT01593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771315.1;locus_tag=HMPREF3107_05775;product=transcriptional regulator;protein_id=OFT01593.1;transl_table=11 KV790798.1 Genbank gene 9147 10484 . + . ID=gene-HMPREF3107_05780;Name=HMPREF3107_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05780 KV790798.1 Protein Homology CDS 9147 10484 . + 0 ID=cds-OFT01596.1;Parent=gene-HMPREF3107_05780;Dbxref=NCBI_GP:OFT01596.1;Name=OFT01596.1;Note=MexX%3B AmrA%3B involved in resistance to antibiotics%3B periplasmic membrane fusion protein%3B functions along with MexY and OprM%3B part of an inducible system that appears to respond to interference with the cellular translation machinery;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520506.1;locus_tag=HMPREF3107_05780;product=efflux transporter periplasmic adaptor subunit;protein_id=OFT01596.1;transl_table=11 KV790798.1 Genbank gene 10497 13673 . + . ID=gene-HMPREF3107_05785;Name=HMPREF3107_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05785 KV790798.1 Protein Homology CDS 10497 13673 . + 0 ID=cds-OFT01594.1;Parent=gene-HMPREF3107_05785;Dbxref=NCBI_GP:OFT01594.1;Name=OFT01594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771320.1;locus_tag=HMPREF3107_05785;product=multidrug efflux RND transporter permease subunit;protein_id=OFT01594.1;transl_table=11 KV790798.1 Genbank gene 13740 15173 . + . ID=gene-HMPREF3107_05790;Name=HMPREF3107_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05790 KV790798.1 Protein Homology CDS 13740 15173 . + 0 ID=cds-OFT01595.1;Parent=gene-HMPREF3107_05790;Dbxref=NCBI_GP:OFT01595.1;Name=OFT01595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771321.1;locus_tag=HMPREF3107_05790;product=multidrug transporter;protein_id=OFT01595.1;transl_table=11 ##sequence-region KV790799.1 1 2627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790799.1 Genbank region 1 2627 . + . ID=KV790799.1:1..2627;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790799.1 Genbank pseudogene 1 2627 . + . ID=gene-HMPREF3107_05795;Name=HMPREF3107_05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05795;pseudo=true KV790799.1 GeneMarkS+ CDS 1 2627 . + 0 ID=cds-HMPREF3107_05795;Parent=gene-HMPREF3107_05795;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05795;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790800.1 1 1154 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790800.1 Genbank region 1 1154 . + . ID=KV790800.1:1..1154;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790800.1 Genbank pseudogene 1 293 . + . ID=gene-HMPREF3107_05800;Name=HMPREF3107_05800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_05800;pseudo=true KV790800.1 Protein Homology CDS 1 293 . + 2 ID=cds-HMPREF3107_05800;Parent=gene-HMPREF3107_05800;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684692.1;locus_tag=HMPREF3107_05800;product=integrase;pseudo=true;transl_table=11 KV790800.1 Genbank gene 429 1088 . + . ID=gene-HMPREF3107_05805;Name=HMPREF3107_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05805 KV790800.1 GeneMarkS+ CDS 429 1088 . + 0 ID=cds-OFT01577.1;Parent=gene-HMPREF3107_05805;Dbxref=NCBI_GP:OFT01577.1;Name=OFT01577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05805;product=hypothetical protein;protein_id=OFT01577.1;transl_table=11 ##sequence-region KV790801.1 1 26735 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790801.1 Genbank region 1 26735 . + . ID=KV790801.1:1..26735;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790801.1 Genbank gene 95 958 . - . ID=gene-HMPREF3107_05810;Name=HMPREF3107_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05810 KV790801.1 Protein Homology CDS 95 958 . - 0 ID=cds-OFT01554.1;Parent=gene-HMPREF3107_05810;Dbxref=NCBI_GP:OFT01554.1;Name=OFT01554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742214.1;locus_tag=HMPREF3107_05810;product=ferredoxin;protein_id=OFT01554.1;transl_table=11 KV790801.1 Genbank gene 1191 2984 . + . ID=gene-HMPREF3107_05815;Name=HMPREF3107_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05815 KV790801.1 Protein Homology CDS 1191 2984 . + 0 ID=cds-OFT01555.1;Parent=gene-HMPREF3107_05815;Dbxref=NCBI_GP:OFT01555.1;Name=OFT01555.1;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778014.1;locus_tag=HMPREF3107_05815;product=2-isopropylmalate synthase;protein_id=OFT01555.1;transl_table=11 KV790801.1 Genbank gene 3054 3389 . + . ID=gene-HMPREF3107_05820;Name=HMPREF3107_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05820 KV790801.1 GeneMarkS+ CDS 3054 3389 . + 0 ID=cds-OFT01556.1;Parent=gene-HMPREF3107_05820;Dbxref=NCBI_GP:OFT01556.1;Name=OFT01556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05820;product=hypothetical protein;protein_id=OFT01556.1;transl_table=11 KV790801.1 Genbank gene 3612 5207 . - . ID=gene-HMPREF3107_05825;Name=HMPREF3107_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05825 KV790801.1 Protein Homology CDS 3612 5207 . - 0 ID=cds-OFT01557.1;Parent=gene-HMPREF3107_05825;Dbxref=NCBI_GP:OFT01557.1;Name=OFT01557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425235.1;locus_tag=HMPREF3107_05825;product=lactate permease;protein_id=OFT01557.1;transl_table=11 KV790801.1 Genbank gene 5526 6968 . - . ID=gene-HMPREF3107_05830;Name=HMPREF3107_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05830 KV790801.1 Protein Homology CDS 5526 6968 . - 0 ID=cds-OFT01558.1;Parent=gene-HMPREF3107_05830;Dbxref=NCBI_GP:OFT01558.1;Name=OFT01558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687953.1;locus_tag=HMPREF3107_05830;product=(Fe-S)-binding protein;protein_id=OFT01558.1;transl_table=11 KV790801.1 Genbank gene 6965 7666 . - . ID=gene-HMPREF3107_05835;Name=HMPREF3107_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05835 KV790801.1 Protein Homology CDS 6965 7666 . - 0 ID=cds-OFT01559.1;Parent=gene-HMPREF3107_05835;Dbxref=NCBI_GP:OFT01559.1;Name=OFT01559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282792.1;locus_tag=HMPREF3107_05835;product=hypothetical protein;protein_id=OFT01559.1;transl_table=11 KV790801.1 Genbank gene 7663 8433 . - . ID=gene-HMPREF3107_05840;Name=HMPREF3107_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05840 KV790801.1 Protein Homology CDS 7663 8433 . - 0 ID=cds-OFT01560.1;Parent=gene-HMPREF3107_05840;Dbxref=NCBI_GP:OFT01560.1;Name=OFT01560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271230.1;locus_tag=HMPREF3107_05840;product=oxidoreductase;protein_id=OFT01560.1;transl_table=11 KV790801.1 Genbank gene 8651 9448 . + . ID=gene-HMPREF3107_05845;Name=HMPREF3107_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05845 KV790801.1 Protein Homology CDS 8651 9448 . + 0 ID=cds-OFT01561.1;Parent=gene-HMPREF3107_05845;Dbxref=NCBI_GP:OFT01561.1;Name=OFT01561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773064.1;locus_tag=HMPREF3107_05845;product=pyruvate dehydrogenase;protein_id=OFT01561.1;transl_table=11 KV790801.1 Genbank gene 9712 10251 . - . ID=gene-HMPREF3107_05850;Name=HMPREF3107_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05850 KV790801.1 GeneMarkS+ CDS 9712 10251 . - 0 ID=cds-OFT01562.1;Parent=gene-HMPREF3107_05850;Dbxref=NCBI_GP:OFT01562.1;Name=OFT01562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05850;product=hypothetical protein;protein_id=OFT01562.1;transl_table=11 KV790801.1 Genbank gene 10371 11678 . - . ID=gene-HMPREF3107_05855;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=HMPREF3107_05855 KV790801.1 Protein Homology CDS 10371 11678 . - 0 ID=cds-OFT01563.1;Parent=gene-HMPREF3107_05855;Dbxref=NCBI_GP:OFT01563.1;Name=OFT01563.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425247.1;locus_tag=HMPREF3107_05855;product=N-acetylmuramoyl-L-alanine amidase;protein_id=OFT01563.1;transl_table=11 KV790801.1 Genbank gene 11648 12133 . - . ID=gene-HMPREF3107_05860;Name=HMPREF3107_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05860 KV790801.1 Protein Homology CDS 11648 12133 . - 0 ID=cds-OFT01564.1;Parent=gene-HMPREF3107_05860;Dbxref=NCBI_GP:OFT01564.1;Name=OFT01564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773077.1;locus_tag=HMPREF3107_05860;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=OFT01564.1;transl_table=11 KV790801.1 Genbank gene 12333 13145 . + . ID=gene-HMPREF3107_05865;Name=HMPREF3107_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05865 KV790801.1 Protein Homology CDS 12333 13145 . + 0 ID=cds-OFT01565.1;Parent=gene-HMPREF3107_05865;Dbxref=NCBI_GP:OFT01565.1;Name=OFT01565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117382.1;locus_tag=HMPREF3107_05865;product=glutamate racemase;protein_id=OFT01565.1;transl_table=11 KV790801.1 Genbank gene 13368 15182 . - . ID=gene-HMPREF3107_05870;Name=HMPREF3107_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05870 KV790801.1 Protein Homology CDS 13368 15182 . - 0 ID=cds-OFT01566.1;Parent=gene-HMPREF3107_05870;Dbxref=NCBI_GP:OFT01566.1;Name=OFT01566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773084.1;locus_tag=HMPREF3107_05870;product=polymerase;protein_id=OFT01566.1;transl_table=11 KV790801.1 Genbank gene 15175 15537 . - . ID=gene-HMPREF3107_05875;Name=HMPREF3107_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05875 KV790801.1 Protein Homology CDS 15175 15537 . - 0 ID=cds-OFT01567.1;Parent=gene-HMPREF3107_05875;Dbxref=NCBI_GP:OFT01567.1;Name=OFT01567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226594.1;locus_tag=HMPREF3107_05875;product=hypothetical protein;protein_id=OFT01567.1;transl_table=11 KV790801.1 Genbank gene 15877 16107 . + . ID=gene-HMPREF3107_05880;Name=HMPREF3107_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05880 KV790801.1 GeneMarkS+ CDS 15877 16107 . + 0 ID=cds-OFT01568.1;Parent=gene-HMPREF3107_05880;Dbxref=NCBI_GP:OFT01568.1;Name=OFT01568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_05880;product=hypothetical protein;protein_id=OFT01568.1;transl_table=11 KV790801.1 Genbank gene 16101 17441 . + . ID=gene-HMPREF3107_05885;Name=HMPREF3107_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05885 KV790801.1 Protein Homology CDS 16101 17441 . + 0 ID=cds-OFT01569.1;Parent=gene-HMPREF3107_05885;Dbxref=NCBI_GP:OFT01569.1;Name=OFT01569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173555.1;locus_tag=HMPREF3107_05885;product=poly(A) polymerase;protein_id=OFT01569.1;transl_table=11 KV790801.1 Genbank gene 17551 18327 . + . ID=gene-HMPREF3107_05890;Name=HMPREF3107_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05890 KV790801.1 Protein Homology CDS 17551 18327 . + 0 ID=cds-OFT01570.1;Parent=gene-HMPREF3107_05890;Dbxref=NCBI_GP:OFT01570.1;Name=OFT01570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575386.1;locus_tag=HMPREF3107_05890;product=ferredoxin--NADP(+) reductase;protein_id=OFT01570.1;transl_table=11 KV790801.1 Genbank gene 18575 18988 . + . ID=gene-HMPREF3107_05895;Name=HMPREF3107_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05895 KV790801.1 Protein Homology CDS 18575 18988 . + 0 ID=cds-OFT01571.1;Parent=gene-HMPREF3107_05895;Dbxref=NCBI_GP:OFT01571.1;Name=OFT01571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768927.1;locus_tag=HMPREF3107_05895;product=flagellar motor protein MotB;protein_id=OFT01571.1;transl_table=11 KV790801.1 Genbank gene 19067 22552 . - . ID=gene-HMPREF3107_05900;Name=HMPREF3107_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05900 KV790801.1 Protein Homology CDS 19067 22552 . - 0 ID=cds-OFT01572.1;Parent=gene-HMPREF3107_05900;Dbxref=NCBI_GP:OFT01572.1;Name=OFT01572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341190.1;locus_tag=HMPREF3107_05900;product=chromosome segregation protein SMC;protein_id=OFT01572.1;transl_table=11 KV790801.1 Genbank gene 22956 23726 . + . ID=gene-HMPREF3107_05905;Name=HMPREF3107_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05905 KV790801.1 Protein Homology CDS 22956 23726 . + 0 ID=cds-OFT01575.1;Parent=gene-HMPREF3107_05905;Dbxref=NCBI_GP:OFT01575.1;Name=OFT01575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425345.1;locus_tag=HMPREF3107_05905;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFT01575.1;transl_table=11 KV790801.1 Genbank gene 23875 24627 . + . ID=gene-HMPREF3107_05910;Name=HMPREF3107_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05910 KV790801.1 Protein Homology CDS 23875 24627 . + 0 ID=cds-OFT01573.1;Parent=gene-HMPREF3107_05910;Dbxref=NCBI_GP:OFT01573.1;Name=OFT01573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282665.1;locus_tag=HMPREF3107_05910;product=glutathione peroxidase;protein_id=OFT01573.1;transl_table=11 KV790801.1 Genbank gene 24916 26364 . + . ID=gene-HMPREF3107_05915;Name=HMPREF3107_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05915 KV790801.1 Protein Homology CDS 24916 26364 . + 0 ID=cds-OFT01574.1;Parent=gene-HMPREF3107_05915;Dbxref=NCBI_GP:OFT01574.1;Name=OFT01574.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285848.1;locus_tag=HMPREF3107_05915;product=dihydrolipoamide dehydrogenase;protein_id=OFT01574.1;transl_table=11 ##sequence-region KV790802.1 1 67490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790802.1 Genbank region 1 67490 . + . ID=KV790802.1:1..67490;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790802.1 Genbank gene 235 621 . + . ID=gene-HMPREF3107_05920;Name=HMPREF3107_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05920 KV790802.1 Protein Homology CDS 235 621 . + 0 ID=cds-OFT01447.1;Parent=gene-HMPREF3107_05920;Dbxref=NCBI_GP:OFT01447.1;Name=OFT01447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744140.1;locus_tag=HMPREF3107_05920;product=hypothetical protein;protein_id=OFT01447.1;transl_table=11 KV790802.1 Genbank gene 700 1140 . - . ID=gene-HMPREF3107_05925;Name=HMPREF3107_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05925 KV790802.1 Protein Homology CDS 700 1140 . - 0 ID=cds-OFT01448.1;Parent=gene-HMPREF3107_05925;Dbxref=NCBI_GP:OFT01448.1;Name=OFT01448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342786.1;locus_tag=HMPREF3107_05925;product=lipoic acid synthetase;protein_id=OFT01448.1;transl_table=11 KV790802.1 Genbank gene 1164 1364 . - . ID=gene-HMPREF3107_05930;Name=HMPREF3107_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05930 KV790802.1 Protein Homology CDS 1164 1364 . - 0 ID=cds-OFT01449.1;Parent=gene-HMPREF3107_05930;Dbxref=NCBI_GP:OFT01449.1;Name=OFT01449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742028.1;locus_tag=HMPREF3107_05930;product=hypothetical protein;protein_id=OFT01449.1;transl_table=11 KV790802.1 Genbank gene 1492 2469 . - . ID=gene-HMPREF3107_05935;Name=HMPREF3107_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05935 KV790802.1 Protein Homology CDS 1492 2469 . - 0 ID=cds-OFT01450.1;Parent=gene-HMPREF3107_05935;Dbxref=NCBI_GP:OFT01450.1;Name=OFT01450.1;Note=catalyzes the oxidation of malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284118.1;locus_tag=HMPREF3107_05935;product=malate dehydrogenase;protein_id=OFT01450.1;transl_table=11 KV790802.1 Genbank gene 3087 3470 . + . ID=gene-HMPREF3107_05940;Name=HMPREF3107_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05940 KV790802.1 Protein Homology CDS 3087 3470 . + 0 ID=cds-OFT01451.1;Parent=gene-HMPREF3107_05940;Dbxref=NCBI_GP:OFT01451.1;Name=OFT01451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687984.1;locus_tag=HMPREF3107_05940;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=OFT01451.1;transl_table=11 KV790802.1 Genbank gene 3464 3808 . + . ID=gene-HMPREF3107_05945;Name=HMPREF3107_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05945 KV790802.1 Protein Homology CDS 3464 3808 . + 0 ID=cds-OFT01452.1;Parent=gene-HMPREF3107_05945;Dbxref=NCBI_GP:OFT01452.1;Name=OFT01452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343356.1;locus_tag=HMPREF3107_05945;product=succinate dehydrogenase;protein_id=OFT01452.1;transl_table=11 KV790802.1 Genbank gene 3825 5588 . + . ID=gene-HMPREF3107_05950;Name=HMPREF3107_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05950 KV790802.1 Protein Homology CDS 3825 5588 . + 0 ID=cds-OFT01453.1;Parent=gene-HMPREF3107_05950;Dbxref=NCBI_GP:OFT01453.1;Name=OFT01453.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118267.1;locus_tag=HMPREF3107_05950;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=OFT01453.1;transl_table=11 KV790802.1 Genbank gene 5601 6308 . + . ID=gene-HMPREF3107_05955;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=HMPREF3107_05955 KV790802.1 Protein Homology CDS 5601 6308 . + 0 ID=cds-OFT01454.1;Parent=gene-HMPREF3107_05955;Dbxref=NCBI_GP:OFT01454.1;Name=OFT01454.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116985.1;locus_tag=HMPREF3107_05955;product=succinate dehydrogenase iron-sulfur subunit;protein_id=OFT01454.1;transl_table=11 KV790802.1 Genbank gene 6311 6559 . + . ID=gene-HMPREF3107_05960;Name=HMPREF3107_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05960 KV790802.1 Protein Homology CDS 6311 6559 . + 0 ID=cds-OFT01455.1;Parent=gene-HMPREF3107_05960;Dbxref=NCBI_GP:OFT01455.1;Name=OFT01455.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213764.1;locus_tag=HMPREF3107_05960;product=hypothetical protein;protein_id=OFT01455.1;transl_table=11 KV790802.1 Genbank gene 6621 7904 . + . ID=gene-HMPREF3107_05965;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=HMPREF3107_05965 KV790802.1 Protein Homology CDS 6621 7904 . + 0 ID=cds-OFT01456.1;Parent=gene-HMPREF3107_05965;Dbxref=NCBI_GP:OFT01456.1;Name=OFT01456.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116987.1;locus_tag=HMPREF3107_05965;product=citrate (Si)-synthase;protein_id=OFT01456.1;transl_table=11 KV790802.1 Genbank gene 8072 10903 . + . ID=gene-HMPREF3107_05970;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=HMPREF3107_05970 KV790802.1 Protein Homology CDS 8072 10903 . + 0 ID=cds-OFT01457.1;Parent=gene-HMPREF3107_05970;Dbxref=NCBI_GP:OFT01457.1;Name=OFT01457.1;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;gbkey=CDS;gene=sucA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775345.1;locus_tag=HMPREF3107_05970;product=2-oxoglutarate dehydrogenase E1 component;protein_id=OFT01457.1;transl_table=11 KV790802.1 Genbank gene 10967 12151 . + . ID=gene-HMPREF3107_05975;Name=HMPREF3107_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05975 KV790802.1 Protein Homology CDS 10967 12151 . + 0 ID=cds-OFT01458.1;Parent=gene-HMPREF3107_05975;Dbxref=NCBI_GP:OFT01458.1;Name=OFT01458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425667.1;locus_tag=HMPREF3107_05975;product=dihydrolipoamide succinyltransferase;protein_id=OFT01458.1;transl_table=11 KV790802.1 Genbank gene 12321 13754 . + . ID=gene-HMPREF3107_05980;Name=HMPREF3107_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05980 KV790802.1 Protein Homology CDS 12321 13754 . + 0 ID=cds-OFT01459.1;Parent=gene-HMPREF3107_05980;Dbxref=NCBI_GP:OFT01459.1;Name=OFT01459.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745605.1;locus_tag=HMPREF3107_05980;product=dihydrolipoyl dehydrogenase;protein_id=OFT01459.1;transl_table=11 KV790802.1 Genbank gene 14103 15236 . + . ID=gene-HMPREF3107_05985;Name=HMPREF3107_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05985 KV790802.1 Protein Homology CDS 14103 15236 . + 0 ID=cds-OFT01460.1;Parent=gene-HMPREF3107_05985;Dbxref=NCBI_GP:OFT01460.1;Name=OFT01460.1;Note=mutations in this gene result in a compromised ability for drug-inducible mexXY expression%3B expression is inducible by the same ribosome-targeting agents that induce mexXY;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765980.1;locus_tag=HMPREF3107_05985;product=RNA ligase RtcB family protein;protein_id=OFT01460.1;transl_table=11 KV790802.1 Genbank gene 15233 15931 . + . ID=gene-HMPREF3107_05990;Name=HMPREF3107_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05990 KV790802.1 Protein Homology CDS 15233 15931 . + 0 ID=cds-OFT01461.1;Parent=gene-HMPREF3107_05990;Dbxref=NCBI_GP:OFT01461.1;Name=OFT01461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766012.1;locus_tag=HMPREF3107_05990;product=hypothetical protein;protein_id=OFT01461.1;transl_table=11 KV790802.1 Genbank gene 15931 16545 . + . ID=gene-HMPREF3107_05995;Name=HMPREF3107_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_05995 KV790802.1 Protein Homology CDS 15931 16545 . + 0 ID=cds-OFT01471.1;Parent=gene-HMPREF3107_05995;Dbxref=NCBI_GP:OFT01471.1;Name=OFT01471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004238240.1;locus_tag=HMPREF3107_05995;product=hypothetical protein;protein_id=OFT01471.1;transl_table=11 KV790802.1 Genbank gene 16870 17364 . - . ID=gene-HMPREF3107_06000;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=HMPREF3107_06000 KV790802.1 Protein Homology CDS 16870 17364 . - 0 ID=cds-OFT01462.1;Parent=gene-HMPREF3107_06000;Dbxref=NCBI_GP:OFT01462.1;Name=OFT01462.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173739.1;locus_tag=HMPREF3107_06000;product=lipid hydroperoxide peroxidase;protein_id=OFT01462.1;transl_table=11 KV790802.1 Genbank gene 17462 18058 . - . ID=gene-HMPREF3107_06005;Name=HMPREF3107_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06005 KV790802.1 Protein Homology CDS 17462 18058 . - 0 ID=cds-OFT01463.1;Parent=gene-HMPREF3107_06005;Dbxref=NCBI_GP:OFT01463.1;Name=OFT01463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770935.1;locus_tag=HMPREF3107_06005;product=toluene tolerance protein;protein_id=OFT01463.1;transl_table=11 KV790802.1 Genbank gene 18240 18713 . - . ID=gene-HMPREF3107_06010;Name=HMPREF3107_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06010 KV790802.1 Protein Homology CDS 18240 18713 . - 0 ID=cds-OFT01472.1;Parent=gene-HMPREF3107_06010;Dbxref=NCBI_GP:OFT01472.1;Name=OFT01472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284088.1;locus_tag=HMPREF3107_06010;product=prokaryotic membrane lipolipid attachment site family protein;protein_id=OFT01472.1;transl_table=11 KV790802.1 Genbank gene 18735 19037 . - . ID=gene-HMPREF3107_06015;Name=HMPREF3107_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06015 KV790802.1 GeneMarkS+ CDS 18735 19037 . - 0 ID=cds-OFT01464.1;Parent=gene-HMPREF3107_06015;Dbxref=NCBI_GP:OFT01464.1;Name=OFT01464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06015;product=hypothetical protein;protein_id=OFT01464.1;transl_table=11 KV790802.1 Genbank gene 19077 20009 . - . ID=gene-HMPREF3107_06020;Name=HMPREF3107_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06020 KV790802.1 Protein Homology CDS 19077 20009 . - 0 ID=cds-OFT01465.1;Parent=gene-HMPREF3107_06020;Dbxref=NCBI_GP:OFT01465.1;Name=OFT01465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426564.1;locus_tag=HMPREF3107_06020;product=cysteine synthase A;protein_id=OFT01465.1;transl_table=11 KV790802.1 Genbank gene 20117 20710 . - . ID=gene-HMPREF3107_06025;Name=HMPREF3107_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06025 KV790802.1 Protein Homology CDS 20117 20710 . - 0 ID=cds-OFT01466.1;Parent=gene-HMPREF3107_06025;Dbxref=NCBI_GP:OFT01466.1;Name=OFT01466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770945.1;locus_tag=HMPREF3107_06025;product=hypothetical protein;protein_id=OFT01466.1;transl_table=11 KV790802.1 Genbank gene 20718 21566 . - . ID=gene-HMPREF3107_06030;Name=HMPREF3107_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06030 KV790802.1 Protein Homology CDS 20718 21566 . - 0 ID=cds-OFT01467.1;Parent=gene-HMPREF3107_06030;Dbxref=NCBI_GP:OFT01467.1;Name=OFT01467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234768.1;locus_tag=HMPREF3107_06030;product=diaminopimelate epimerase;protein_id=OFT01467.1;transl_table=11 KV790802.1 Genbank gene 21670 21900 . - . ID=gene-HMPREF3107_06035;Name=HMPREF3107_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06035 KV790802.1 Protein Homology CDS 21670 21900 . - 0 ID=cds-OFT01468.1;Parent=gene-HMPREF3107_06035;Dbxref=NCBI_GP:OFT01468.1;Name=OFT01468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426567.1;locus_tag=HMPREF3107_06035;product=hypothetical protein;protein_id=OFT01468.1;transl_table=11 KV790802.1 Genbank gene 22233 23096 . + . ID=gene-HMPREF3107_06040;Name=HMPREF3107_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06040 KV790802.1 Protein Homology CDS 22233 23096 . + 0 ID=cds-OFT01469.1;Parent=gene-HMPREF3107_06040;Dbxref=NCBI_GP:OFT01469.1;Name=OFT01469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770951.1;locus_tag=HMPREF3107_06040;product=NAD(P)-dependent oxidoreductase;protein_id=OFT01469.1;transl_table=11 KV790802.1 Genbank gene 23168 24520 . + . ID=gene-HMPREF3107_06045;Name=HMPREF3107_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06045 KV790802.1 Protein Homology CDS 23168 24520 . + 0 ID=cds-OFT01470.1;Parent=gene-HMPREF3107_06045;Dbxref=NCBI_GP:OFT01470.1;Name=OFT01470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519554.1;locus_tag=HMPREF3107_06045;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=OFT01470.1;transl_table=11 KV790802.1 Genbank gene 24748 26139 . - . ID=gene-HMPREF3107_06050;Name=HMPREF3107_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06050 KV790802.1 Protein Homology CDS 24748 26139 . - 0 ID=cds-OFT01426.1;Parent=gene-HMPREF3107_06050;Dbxref=NCBI_GP:OFT01426.1;Name=OFT01426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283330.1;locus_tag=HMPREF3107_06050;product=DNA polymerase III subunit epsilon;protein_id=OFT01426.1;transl_table=11 KV790802.1 Genbank gene 26253 26329 . + . ID=gene-HMPREF3107_06055;Name=HMPREF3107_06055;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_06055 KV790802.1 tRNAscan-SE tRNA 26253 26329 . + . ID=rna-HMPREF3107_06055;Parent=gene-HMPREF3107_06055;anticodon=(pos:26287..26289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06055;product=tRNA-Arg KV790802.1 tRNAscan-SE exon 26253 26329 . + . ID=exon-HMPREF3107_06055-1;Parent=rna-HMPREF3107_06055;anticodon=(pos:26287..26289);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06055;product=tRNA-Arg KV790802.1 Genbank gene 26349 26423 . + . ID=gene-HMPREF3107_06060;Name=HMPREF3107_06060;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_06060 KV790802.1 tRNAscan-SE tRNA 26349 26423 . + . ID=rna-HMPREF3107_06060;Parent=gene-HMPREF3107_06060;anticodon=(pos:26382..26384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06060;product=tRNA-Glu KV790802.1 tRNAscan-SE exon 26349 26423 . + . ID=exon-HMPREF3107_06060-1;Parent=rna-HMPREF3107_06060;anticodon=(pos:26382..26384);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06060;product=tRNA-Glu KV790802.1 Genbank gene 26798 27724 . + . ID=gene-HMPREF3107_06065;Name=HMPREF3107_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06065 KV790802.1 GeneMarkS+ CDS 26798 27724 . + 0 ID=cds-OFT01427.1;Parent=gene-HMPREF3107_06065;Dbxref=NCBI_GP:OFT01427.1;Name=OFT01427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06065;product=hypothetical protein;protein_id=OFT01427.1;transl_table=11 KV790802.1 Genbank gene 28247 28768 . - . ID=gene-HMPREF3107_06070;Name=HMPREF3107_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06070 KV790802.1 Protein Homology CDS 28247 28768 . - 0 ID=cds-OFT01374.1;Parent=gene-HMPREF3107_06070;Dbxref=NCBI_GP:OFT01374.1;Name=OFT01374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710541.1;locus_tag=HMPREF3107_06070;product=single-stranded DNA-binding protein;protein_id=OFT01374.1;transl_table=11 KV790802.1 Genbank gene 28772 30154 . - . ID=gene-HMPREF3107_06075;Name=HMPREF3107_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06075 KV790802.1 Protein Homology CDS 28772 30154 . - 0 ID=cds-OFT01375.1;Parent=gene-HMPREF3107_06075;Dbxref=NCBI_GP:OFT01375.1;Name=OFT01375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951164.1;locus_tag=HMPREF3107_06075;product=hypothetical protein;protein_id=OFT01375.1;transl_table=11 KV790802.1 Genbank gene 30432 31442 . + . ID=gene-HMPREF3107_06080;Name=HMPREF3107_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06080 KV790802.1 Protein Homology CDS 30432 31442 . + 0 ID=cds-OFT01376.1;Parent=gene-HMPREF3107_06080;Dbxref=NCBI_GP:OFT01376.1;Name=OFT01376.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520609.1;locus_tag=HMPREF3107_06080;product=tryptophan--tRNA ligase;protein_id=OFT01376.1;transl_table=11 KV790802.1 Genbank gene 31512 32300 . + . ID=gene-HMPREF3107_06085;Name=HMPREF3107_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06085 KV790802.1 GeneMarkS+ CDS 31512 32300 . + 0 ID=cds-OFT01377.1;Parent=gene-HMPREF3107_06085;Dbxref=NCBI_GP:OFT01377.1;Name=OFT01377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06085;product=hypothetical protein;protein_id=OFT01377.1;transl_table=11 KV790802.1 Genbank gene 32405 32782 . + . ID=gene-HMPREF3107_06090;Name=HMPREF3107_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06090 KV790802.1 Protein Homology CDS 32405 32782 . + 0 ID=cds-OFT01406.1;Parent=gene-HMPREF3107_06090;Dbxref=NCBI_GP:OFT01406.1;Name=OFT01406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273255.1;locus_tag=HMPREF3107_06090;product=holo-ACP synthase;protein_id=OFT01406.1;transl_table=11 KV790802.1 Genbank gene 32962 33429 . - . ID=gene-HMPREF3107_06095;Name=HMPREF3107_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06095 KV790802.1 Protein Homology CDS 32962 33429 . - 0 ID=cds-OFT01378.1;Parent=gene-HMPREF3107_06095;Dbxref=NCBI_GP:OFT01378.1;Name=OFT01378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425037.1;locus_tag=HMPREF3107_06095;product=pilin;protein_id=OFT01378.1;transl_table=11 KV790802.1 Genbank gene 33506 33892 . - . ID=gene-HMPREF3107_06100;Name=HMPREF3107_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06100 KV790802.1 Protein Homology CDS 33506 33892 . - 0 ID=cds-OFT01379.1;Parent=gene-HMPREF3107_06100;Dbxref=NCBI_GP:OFT01379.1;Name=OFT01379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769618.1;locus_tag=HMPREF3107_06100;product=pilus assembly protein PilV;protein_id=OFT01379.1;transl_table=11 KV790802.1 Genbank gene 34324 35499 . + . ID=gene-HMPREF3107_06105;Name=HMPREF3107_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06105 KV790802.1 Protein Homology CDS 34324 35499 . + 0 ID=cds-OFT01407.1;Parent=gene-HMPREF3107_06105;Dbxref=NCBI_GP:OFT01407.1;Name=OFT01407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519696.1;locus_tag=HMPREF3107_06105;product=efflux transporter periplasmic adaptor subunit;protein_id=OFT01407.1;transl_table=11 KV790802.1 Genbank gene 35596 37533 . + . ID=gene-HMPREF3107_06110;Name=HMPREF3107_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06110 KV790802.1 Protein Homology CDS 35596 37533 . + 0 ID=cds-OFT01380.1;Parent=gene-HMPREF3107_06110;Dbxref=NCBI_GP:OFT01380.1;Name=OFT01380.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683017.1;locus_tag=HMPREF3107_06110;product=macrolide ABC transporter permease/ATP-binding protein MacB;protein_id=OFT01380.1;transl_table=11 KV790802.1 Genbank gene 37781 38455 . + . ID=gene-HMPREF3107_06115;Name=HMPREF3107_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06115 KV790802.1 Protein Homology CDS 37781 38455 . + 0 ID=cds-OFT01381.1;Parent=gene-HMPREF3107_06115;Dbxref=NCBI_GP:OFT01381.1;Name=OFT01381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682634.1;locus_tag=HMPREF3107_06115;product=glutathione S-transferase;protein_id=OFT01381.1;transl_table=11 KV790802.1 Genbank gene 38775 39251 . + . ID=gene-HMPREF3107_06120;Name=HMPREF3107_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06120 KV790802.1 Protein Homology CDS 38775 39251 . + 0 ID=cds-OFT01382.1;Parent=gene-HMPREF3107_06120;Dbxref=NCBI_GP:OFT01382.1;Name=OFT01382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174634.1;locus_tag=HMPREF3107_06120;product=hypothetical protein;protein_id=OFT01382.1;transl_table=11 KV790802.1 Genbank pseudogene 39465 39770 . + . ID=gene-HMPREF3107_06125;Name=HMPREF3107_06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06125;pseudo=true KV790802.1 Protein Homology CDS 39465 39770 . + 0 ID=cds-HMPREF3107_06125;Parent=gene-HMPREF3107_06125;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174632.1;locus_tag=HMPREF3107_06125;product=mitomycin resistance protein;pseudo=true;transl_table=11 KV790802.1 Genbank gene 39969 41351 . + . ID=gene-HMPREF3107_06130;Name=HMPREF3107_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06130 KV790802.1 Protein Homology CDS 39969 41351 . + 0 ID=cds-OFT01383.1;Parent=gene-HMPREF3107_06130;Dbxref=NCBI_GP:OFT01383.1;Name=OFT01383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425033.1;locus_tag=HMPREF3107_06130;product=transporter;protein_id=OFT01383.1;transl_table=11 KV790802.1 Genbank gene 41406 41876 . - . ID=gene-HMPREF3107_06135;Name=HMPREF3107_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06135 KV790802.1 Protein Homology CDS 41406 41876 . - 0 ID=cds-OFT01408.1;Parent=gene-HMPREF3107_06135;Dbxref=NCBI_GP:OFT01408.1;Name=OFT01408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312809.1;locus_tag=HMPREF3107_06135;product=thioredoxin;protein_id=OFT01408.1;transl_table=11 KV790802.1 Genbank gene 41985 43118 . - . ID=gene-HMPREF3107_06140;Name=HMPREF3107_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06140 KV790802.1 Protein Homology CDS 41985 43118 . - 0 ID=cds-OFT01384.1;Parent=gene-HMPREF3107_06140;Dbxref=NCBI_GP:OFT01384.1;Name=OFT01384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519969.1;locus_tag=HMPREF3107_06140;product=poly(A) polymerase;protein_id=OFT01384.1;transl_table=11 KV790802.1 Genbank gene 43151 43951 . - . ID=gene-HMPREF3107_06145;Name=HMPREF3107_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06145 KV790802.1 Protein Homology CDS 43151 43951 . - 0 ID=cds-OFT01385.1;Parent=gene-HMPREF3107_06145;Dbxref=NCBI_GP:OFT01385.1;Name=OFT01385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519970.1;locus_tag=HMPREF3107_06145;product=2'-5' RNA ligase;protein_id=OFT01385.1;transl_table=11 KV790802.1 Genbank gene 44667 45866 . - . ID=gene-HMPREF3107_06150;Name=HMPREF3107_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06150 KV790802.1 Protein Homology CDS 44667 45866 . - 0 ID=cds-OFT01386.1;Parent=gene-HMPREF3107_06150;Dbxref=NCBI_GP:OFT01386.1;Name=OFT01386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687020.1;locus_tag=HMPREF3107_06150;product=hypothetical protein;protein_id=OFT01386.1;transl_table=11 KV790802.1 Genbank gene 45969 47387 . - . ID=gene-HMPREF3107_06155;Name=HMPREF3107_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06155 KV790802.1 Protein Homology CDS 45969 47387 . - 0 ID=cds-OFT01387.1;Parent=gene-HMPREF3107_06155;Dbxref=NCBI_GP:OFT01387.1;Name=OFT01387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245865.1;locus_tag=HMPREF3107_06155;product=type I glutamate--ammonia ligase;protein_id=OFT01387.1;transl_table=11 KV790802.1 Genbank gene 47512 47916 . - . ID=gene-HMPREF3107_06160;Name=HMPREF3107_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06160 KV790802.1 Protein Homology CDS 47512 47916 . - 0 ID=cds-OFT01388.1;Parent=gene-HMPREF3107_06160;Dbxref=NCBI_GP:OFT01388.1;Name=OFT01388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773522.1;locus_tag=HMPREF3107_06160;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=OFT01388.1;transl_table=11 KV790802.1 Genbank gene 47913 49592 . - . ID=gene-HMPREF3107_06165;Name=HMPREF3107_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06165 KV790802.1 Protein Homology CDS 47913 49592 . - 0 ID=cds-OFT01389.1;Parent=gene-HMPREF3107_06165;Dbxref=NCBI_GP:OFT01389.1;Name=OFT01389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342281.1;locus_tag=HMPREF3107_06165;product=hypothetical protein;protein_id=OFT01389.1;transl_table=11 KV790802.1 Genbank gene 49684 50784 . - . ID=gene-HMPREF3107_06170;Name=HMPREF3107_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06170 KV790802.1 GeneMarkS+ CDS 49684 50784 . - 0 ID=cds-OFT01390.1;Parent=gene-HMPREF3107_06170;Dbxref=NCBI_GP:OFT01390.1;Name=OFT01390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06170;product=hypothetical protein;protein_id=OFT01390.1;transl_table=11 KV790802.1 Genbank gene 51038 52066 . - . ID=gene-HMPREF3107_06175;Name=HMPREF3107_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06175 KV790802.1 Protein Homology CDS 51038 52066 . - 0 ID=cds-OFT01391.1;Parent=gene-HMPREF3107_06175;Dbxref=NCBI_GP:OFT01391.1;Name=OFT01391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342283.1;locus_tag=HMPREF3107_06175;product=hypothetical protein;protein_id=OFT01391.1;transl_table=11 KV790802.1 Genbank gene 52082 52480 . - . ID=gene-HMPREF3107_06180;Name=HMPREF3107_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06180 KV790802.1 Protein Homology CDS 52082 52480 . - 0 ID=cds-OFT01392.1;Parent=gene-HMPREF3107_06180;Dbxref=NCBI_GP:OFT01392.1;Name=OFT01392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745716.1;locus_tag=HMPREF3107_06180;product=hypothetical protein;protein_id=OFT01392.1;transl_table=11 KV790802.1 Genbank gene 52721 53779 . + . ID=gene-HMPREF3107_06185;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=HMPREF3107_06185 KV790802.1 Protein Homology CDS 52721 53779 . + 0 ID=cds-OFT01393.1;Parent=gene-HMPREF3107_06185;Dbxref=NCBI_GP:OFT01393.1;Name=OFT01393.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426738.1;locus_tag=HMPREF3107_06185;product=alanine racemase;protein_id=OFT01393.1;transl_table=11 KV790802.1 Genbank gene 53855 54991 . + . ID=gene-HMPREF3107_06190;Name=HMPREF3107_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06190 KV790802.1 Protein Homology CDS 53855 54991 . + 0 ID=cds-OFT01394.1;Parent=gene-HMPREF3107_06190;Dbxref=NCBI_GP:OFT01394.1;Name=OFT01394.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770063.1;locus_tag=HMPREF3107_06190;product=succinyl-diaminopimelate desuccinylase;protein_id=OFT01394.1;transl_table=11 KV790802.1 Genbank gene 55341 57512 . + . ID=gene-HMPREF3107_06195;Name=HMPREF3107_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06195 KV790802.1 Protein Homology CDS 55341 57512 . + 0 ID=cds-OFT01395.1;Parent=gene-HMPREF3107_06195;Dbxref=NCBI_GP:OFT01395.1;Name=OFT01395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770058.1;locus_tag=HMPREF3107_06195;product=outer membrane ferripyoverdine receptor;protein_id=OFT01395.1;transl_table=11 KV790802.1 Genbank gene 57644 59053 . + . ID=gene-HMPREF3107_06200;Name=HMPREF3107_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06200 KV790802.1 Protein Homology CDS 57644 59053 . + 0 ID=cds-OFT01396.1;Parent=gene-HMPREF3107_06200;Dbxref=NCBI_GP:OFT01396.1;Name=OFT01396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693752.1;locus_tag=HMPREF3107_06200;product=hypothetical protein;protein_id=OFT01396.1;transl_table=11 KV790802.1 Genbank gene 59142 59813 . - . ID=gene-HMPREF3107_06205;Name=HMPREF3107_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06205 KV790802.1 Protein Homology CDS 59142 59813 . - 0 ID=cds-OFT01397.1;Parent=gene-HMPREF3107_06205;Dbxref=NCBI_GP:OFT01397.1;Name=OFT01397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770055.1;locus_tag=HMPREF3107_06205;product=hypothetical protein;protein_id=OFT01397.1;transl_table=11 KV790802.1 Genbank gene 59810 60301 . - . ID=gene-HMPREF3107_06210;Name=HMPREF3107_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06210 KV790802.1 Protein Homology CDS 59810 60301 . - 0 ID=cds-OFT01398.1;Parent=gene-HMPREF3107_06210;Dbxref=NCBI_GP:OFT01398.1;Name=OFT01398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770053.1;locus_tag=HMPREF3107_06210;product=transcriptional regulator NrdR;protein_id=OFT01398.1;transl_table=11 KV790802.1 Genbank gene 60317 61159 . - . ID=gene-HMPREF3107_06215;Name=HMPREF3107_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06215 KV790802.1 Protein Homology CDS 60317 61159 . - 0 ID=cds-OFT01399.1;Parent=gene-HMPREF3107_06215;Dbxref=NCBI_GP:OFT01399.1;Name=OFT01399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017629283.1;locus_tag=HMPREF3107_06215;product=class II glutamine amidotransferase;protein_id=OFT01399.1;transl_table=11 KV790802.1 Genbank gene 61590 62933 . + . ID=gene-HMPREF3107_06220;Name=HMPREF3107_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06220 KV790802.1 Protein Homology CDS 61590 62933 . + 0 ID=cds-OFT01400.1;Parent=gene-HMPREF3107_06220;Dbxref=NCBI_GP:OFT01400.1;Name=OFT01400.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273106.1;locus_tag=HMPREF3107_06220;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=OFT01400.1;transl_table=11 KV790802.1 Genbank gene 62936 64168 . + . ID=gene-HMPREF3107_06225;Name=HMPREF3107_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06225 KV790802.1 Protein Homology CDS 62936 64168 . + 0 ID=cds-OFT01401.1;Parent=gene-HMPREF3107_06225;Dbxref=NCBI_GP:OFT01401.1;Name=OFT01401.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214356.1;locus_tag=HMPREF3107_06225;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=OFT01401.1;transl_table=11 KV790802.1 Genbank gene 64161 64937 . + . ID=gene-HMPREF3107_06230;Name=HMPREF3107_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06230 KV790802.1 Protein Homology CDS 64161 64937 . + 0 ID=cds-OFT01402.1;Parent=gene-HMPREF3107_06230;Dbxref=NCBI_GP:OFT01402.1;Name=OFT01402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768357.1;locus_tag=HMPREF3107_06230;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=OFT01402.1;transl_table=11 KV790802.1 Genbank gene 64937 65563 . + . ID=gene-HMPREF3107_06235;Name=HMPREF3107_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06235 KV790802.1 Protein Homology CDS 64937 65563 . + 0 ID=cds-OFT01403.1;Parent=gene-HMPREF3107_06235;Dbxref=NCBI_GP:OFT01403.1;Name=OFT01403.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709559.1;locus_tag=HMPREF3107_06235;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=OFT01403.1;transl_table=11 KV790802.1 Genbank gene 65567 66160 . + . ID=gene-HMPREF3107_06240;Name=HMPREF3107_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06240 KV790802.1 Protein Homology CDS 65567 66160 . + 0 ID=cds-OFT01404.1;Parent=gene-HMPREF3107_06240;Dbxref=NCBI_GP:OFT01404.1;Name=OFT01404.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255459.1;locus_tag=HMPREF3107_06240;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=OFT01404.1;transl_table=11 KV790802.1 Genbank gene 66174 67391 . + . ID=gene-HMPREF3107_06245;Name=HMPREF3107_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06245 KV790802.1 Protein Homology CDS 66174 67391 . + 0 ID=cds-OFT01405.1;Parent=gene-HMPREF3107_06245;Dbxref=NCBI_GP:OFT01405.1;Name=OFT01405.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241210.1;locus_tag=HMPREF3107_06245;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=OFT01405.1;transl_table=11 ##sequence-region KV790803.1 1 2513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790803.1 Genbank region 1 2513 . + . ID=KV790803.1:1..2513;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790803.1 Genbank gene 77 550 . - . ID=gene-HMPREF3107_06250;Name=HMPREF3107_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06250 KV790803.1 GeneMarkS+ CDS 77 550 . - 0 ID=cds-OFT01347.1;Parent=gene-HMPREF3107_06250;Dbxref=NCBI_GP:OFT01347.1;Name=OFT01347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06250;product=hypothetical protein;protein_id=OFT01347.1;transl_table=11 KV790803.1 Genbank gene 740 1195 . - . ID=gene-HMPREF3107_06255;Name=HMPREF3107_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06255 KV790803.1 Protein Homology CDS 740 1195 . - 0 ID=cds-OFT01348.1;Parent=gene-HMPREF3107_06255;Dbxref=NCBI_GP:OFT01348.1;Name=OFT01348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255809.1;locus_tag=HMPREF3107_06255;product=hypothetical protein;protein_id=OFT01348.1;transl_table=11 KV790803.1 Genbank gene 2149 2394 . + . ID=gene-HMPREF3107_06260;Name=HMPREF3107_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06260 KV790803.1 Protein Homology CDS 2149 2394 . + 0 ID=cds-OFT01349.1;Parent=gene-HMPREF3107_06260;Dbxref=NCBI_GP:OFT01349.1;Name=OFT01349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680187.1;locus_tag=HMPREF3107_06260;product=hypothetical protein;protein_id=OFT01349.1;transl_table=11 ##sequence-region KV790804.1 1 1552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790804.1 Genbank region 1 1552 . + . ID=KV790804.1:1..1552;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790804.1 Genbank gene 739 1254 . + . ID=gene-HMPREF3107_06265;Name=HMPREF3107_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06265 KV790804.1 Protein Homology CDS 739 1254 . + 0 ID=cds-OFT01340.1;Parent=gene-HMPREF3107_06265;Dbxref=NCBI_GP:OFT01340.1;Name=OFT01340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675606.1;locus_tag=HMPREF3107_06265;product=cytochrome C;protein_id=OFT01340.1;transl_table=11 ##sequence-region KV790805.1 1 5005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790805.1 Genbank region 1 5005 . + . ID=KV790805.1:1..5005;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790805.1 Genbank gene 33 455 . + . ID=gene-HMPREF3107_06270;Name=HMPREF3107_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06270 KV790805.1 Protein Homology CDS 33 455 . + 0 ID=cds-OFT01316.1;Parent=gene-HMPREF3107_06270;Dbxref=NCBI_GP:OFT01316.1;Name=OFT01316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238687.1;locus_tag=HMPREF3107_06270;product=hypothetical protein;protein_id=OFT01316.1;transl_table=11 KV790805.1 Genbank gene 467 748 . - . ID=gene-HMPREF3107_06275;Name=HMPREF3107_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06275 KV790805.1 Protein Homology CDS 467 748 . - 0 ID=cds-OFT01317.1;Parent=gene-HMPREF3107_06275;Dbxref=NCBI_GP:OFT01317.1;Name=OFT01317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015723145.1;locus_tag=HMPREF3107_06275;product=transcriptional regulator;protein_id=OFT01317.1;transl_table=11 KV790805.1 Genbank gene 745 1071 . - . ID=gene-HMPREF3107_06280;Name=HMPREF3107_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06280 KV790805.1 Protein Homology CDS 745 1071 . - 0 ID=cds-OFT01313.1;Parent=gene-HMPREF3107_06280;Dbxref=NCBI_GP:OFT01313.1;Name=OFT01313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238686.1;locus_tag=HMPREF3107_06280;product=hypothetical protein;protein_id=OFT01313.1;transl_table=11 KV790805.1 Genbank pseudogene 1145 2926 . + . ID=gene-HMPREF3107_06285;Name=HMPREF3107_06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06285;pseudo=true KV790805.1 Protein Homology CDS 1145 2926 . + 0 ID=cds-HMPREF3107_06285;Parent=gene-HMPREF3107_06285;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017147109.1;locus_tag=HMPREF3107_06285;product=phage tail protein;pseudo=true;transl_table=11 KV790805.1 Genbank gene 3154 3441 . - . ID=gene-HMPREF3107_06290;Name=HMPREF3107_06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06290 KV790805.1 GeneMarkS+ CDS 3154 3441 . - 0 ID=cds-OFT01314.1;Parent=gene-HMPREF3107_06290;Dbxref=NCBI_GP:OFT01314.1;Name=OFT01314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06290;product=hypothetical protein;protein_id=OFT01314.1;transl_table=11 KV790805.1 Genbank pseudogene 3639 3914 . + . ID=gene-HMPREF3107_06295;Name=HMPREF3107_06295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06295;pseudo=true KV790805.1 Protein Homology CDS 3639 3914 . + 0 ID=cds-HMPREF3107_06295;Parent=gene-HMPREF3107_06295;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686402.1;locus_tag=HMPREF3107_06295;product=hypothetical protein;pseudo=true;transl_table=11 KV790805.1 Genbank gene 4102 4596 . + . ID=gene-HMPREF3107_06300;Name=HMPREF3107_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06300 KV790805.1 Protein Homology CDS 4102 4596 . + 0 ID=cds-OFT01315.1;Parent=gene-HMPREF3107_06300;Dbxref=NCBI_GP:OFT01315.1;Name=OFT01315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219426.1;locus_tag=HMPREF3107_06300;product=hypothetical protein;protein_id=OFT01315.1;transl_table=11 KV790805.1 Genbank pseudogene 4652 5005 . - . ID=gene-HMPREF3107_06305;Name=HMPREF3107_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06305;pseudo=true KV790805.1 Protein Homology CDS 4652 5005 . - 0 ID=cds-HMPREF3107_06305;Parent=gene-HMPREF3107_06305;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220685.1;locus_tag=HMPREF3107_06305;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790806.1 1 109053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790806.1 Genbank region 1 109053 . + . ID=KV790806.1:1..109053;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790806.1 Genbank gene 1 461 . - . ID=gene-HMPREF3107_06310;Name=HMPREF3107_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06310;partial=true;start_range=.,1 KV790806.1 Protein Homology CDS 1 461 . - 0 ID=cds-OFT01119.1;Parent=gene-HMPREF3107_06310;Dbxref=NCBI_GP:OFT01119.1;Name=OFT01119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688753.1%2CRefSeq:WP_002234991.1;locus_tag=HMPREF3107_06310;partial=true;product=hypothetical protein;protein_id=OFT01119.1;start_range=.,1;transl_table=11 KV790806.1 Genbank gene 743 1888 . - . ID=gene-HMPREF3107_06315;Name=HMPREF3107_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06315 KV790806.1 Protein Homology CDS 743 1888 . - 0 ID=cds-OFT01120.1;Parent=gene-HMPREF3107_06315;Dbxref=NCBI_GP:OFT01120.1;Name=OFT01120.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771598.1;locus_tag=HMPREF3107_06315;product=galactokinase;protein_id=OFT01120.1;transl_table=11 KV790806.1 Genbank gene 1952 2206 . - . ID=gene-HMPREF3107_06320;Name=HMPREF3107_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06320 KV790806.1 GeneMarkS+ CDS 1952 2206 . - 0 ID=cds-OFT01121.1;Parent=gene-HMPREF3107_06320;Dbxref=NCBI_GP:OFT01121.1;Name=OFT01121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06320;product=hypothetical protein;protein_id=OFT01121.1;transl_table=11 KV790806.1 Genbank gene 2337 2708 . - . ID=gene-HMPREF3107_06325;Name=HMPREF3107_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06325 KV790806.1 Protein Homology CDS 2337 2708 . - 0 ID=cds-OFT01122.1;Parent=gene-HMPREF3107_06325;Dbxref=NCBI_GP:OFT01122.1;Name=OFT01122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012205719.1;locus_tag=HMPREF3107_06325;product=hypothetical protein;protein_id=OFT01122.1;transl_table=11 KV790806.1 Genbank gene 2938 3279 . - . ID=gene-HMPREF3107_06330;Name=HMPREF3107_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06330 KV790806.1 GeneMarkS+ CDS 2938 3279 . - 0 ID=cds-OFT01123.1;Parent=gene-HMPREF3107_06330;Dbxref=NCBI_GP:OFT01123.1;Name=OFT01123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06330;product=hypothetical protein;protein_id=OFT01123.1;transl_table=11 KV790806.1 Genbank gene 3330 3806 . - . ID=gene-HMPREF3107_06335;Name=HMPREF3107_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06335 KV790806.1 GeneMarkS+ CDS 3330 3806 . - 0 ID=cds-OFT01124.1;Parent=gene-HMPREF3107_06335;Dbxref=NCBI_GP:OFT01124.1;Name=OFT01124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06335;product=hypothetical protein;protein_id=OFT01124.1;transl_table=11 KV790806.1 Genbank gene 3821 4336 . - . ID=gene-HMPREF3107_06340;Name=HMPREF3107_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06340 KV790806.1 GeneMarkS+ CDS 3821 4336 . - 0 ID=cds-OFT01125.1;Parent=gene-HMPREF3107_06340;Dbxref=NCBI_GP:OFT01125.1;Name=OFT01125.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06340;product=hypothetical protein;protein_id=OFT01125.1;transl_table=11 KV790806.1 Genbank gene 4342 5379 . - . ID=gene-HMPREF3107_06345;Name=HMPREF3107_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06345 KV790806.1 Protein Homology CDS 4342 5379 . - 0 ID=cds-OFT01126.1;Parent=gene-HMPREF3107_06345;Dbxref=NCBI_GP:OFT01126.1;Name=OFT01126.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003794263.1;locus_tag=HMPREF3107_06345;product=galactose-1-phosphate uridylyltransferase;protein_id=OFT01126.1;transl_table=11 KV790806.1 Genbank gene 5438 5911 . - . ID=gene-HMPREF3107_06350;Name=HMPREF3107_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06350 KV790806.1 Protein Homology CDS 5438 5911 . - 0 ID=cds-OFT01127.1;Parent=gene-HMPREF3107_06350;Dbxref=NCBI_GP:OFT01127.1;Name=OFT01127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771583.1;locus_tag=HMPREF3107_06350;product=hypothetical protein;protein_id=OFT01127.1;transl_table=11 KV790806.1 Genbank gene 6106 6513 . + . ID=gene-HMPREF3107_06355;Name=HMPREF3107_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06355 KV790806.1 Protein Homology CDS 6106 6513 . + 0 ID=cds-OFT01128.1;Parent=gene-HMPREF3107_06355;Dbxref=NCBI_GP:OFT01128.1;Name=OFT01128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771582.1;locus_tag=HMPREF3107_06355;product=nodulation efficiency NfeD family protein;protein_id=OFT01128.1;transl_table=11 KV790806.1 Genbank gene 6523 7491 . + . ID=gene-HMPREF3107_06360;Name=HMPREF3107_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06360 KV790806.1 Protein Homology CDS 6523 7491 . + 0 ID=cds-OFT01129.1;Parent=gene-HMPREF3107_06360;Dbxref=NCBI_GP:OFT01129.1;Name=OFT01129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771580.1;locus_tag=HMPREF3107_06360;product=stomatin 2;protein_id=OFT01129.1;transl_table=11 KV790806.1 Genbank gene 7582 8055 . - . ID=gene-HMPREF3107_06365;Name=HMPREF3107_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06365 KV790806.1 Protein Homology CDS 7582 8055 . - 0 ID=cds-OFT01130.1;Parent=gene-HMPREF3107_06365;Dbxref=NCBI_GP:OFT01130.1;Name=OFT01130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713854.1;locus_tag=HMPREF3107_06365;product=universal stress protein;protein_id=OFT01130.1;transl_table=11 KV790806.1 Genbank gene 8176 8994 . + . ID=gene-HMPREF3107_06370;Name=HMPREF3107_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06370 KV790806.1 Protein Homology CDS 8176 8994 . + 0 ID=cds-OFT01131.1;Parent=gene-HMPREF3107_06370;Dbxref=NCBI_GP:OFT01131.1;Name=OFT01131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771575.1;locus_tag=HMPREF3107_06370;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=OFT01131.1;transl_table=11 KV790806.1 Genbank gene 9119 9505 . + . ID=gene-HMPREF3107_06375;Name=HMPREF3107_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06375 KV790806.1 Protein Homology CDS 9119 9505 . + 0 ID=cds-OFT01132.1;Parent=gene-HMPREF3107_06375;Dbxref=NCBI_GP:OFT01132.1;Name=OFT01132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771573.1;locus_tag=HMPREF3107_06375;product=hypothetical protein;protein_id=OFT01132.1;transl_table=11 KV790806.1 Genbank gene 9606 10961 . + . ID=gene-HMPREF3107_06380;Name=HMPREF3107_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06380 KV790806.1 Protein Homology CDS 9606 10961 . + 0 ID=cds-OFT01133.1;Parent=gene-HMPREF3107_06380;Dbxref=NCBI_GP:OFT01133.1;Name=OFT01133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575501.1;locus_tag=HMPREF3107_06380;product=U32 family peptidase;protein_id=OFT01133.1;transl_table=11 KV790806.1 Genbank gene 11054 11476 . + . ID=gene-HMPREF3107_06385;Name=HMPREF3107_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06385 KV790806.1 Protein Homology CDS 11054 11476 . + 0 ID=cds-OFT01134.1;Parent=gene-HMPREF3107_06385;Dbxref=NCBI_GP:OFT01134.1;Name=OFT01134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214424.1;locus_tag=HMPREF3107_06385;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=OFT01134.1;transl_table=11 KV790806.1 Genbank gene 11850 12488 . + . ID=gene-HMPREF3107_06390;Name=HMPREF3107_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06390 KV790806.1 Protein Homology CDS 11850 12488 . + 0 ID=cds-OFT01135.1;Parent=gene-HMPREF3107_06390;Dbxref=NCBI_GP:OFT01135.1;Name=OFT01135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777273.1;locus_tag=HMPREF3107_06390;product=7-carboxy-7-deazaguanine synthase;protein_id=OFT01135.1;transl_table=11 KV790806.1 Genbank gene 12617 13738 . + . ID=gene-HMPREF3107_06395;Name=HMPREF3107_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06395 KV790806.1 Protein Homology CDS 12617 13738 . + 0 ID=cds-OFT01191.1;Parent=gene-HMPREF3107_06395;Dbxref=NCBI_GP:OFT01191.1;Name=OFT01191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282672.1;locus_tag=HMPREF3107_06395;product=GTPase HflX;protein_id=OFT01191.1;transl_table=11 KV790806.1 Genbank gene 13788 15194 . + . ID=gene-HMPREF3107_06400;Name=HMPREF3107_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06400 KV790806.1 Protein Homology CDS 13788 15194 . + 0 ID=cds-OFT01136.1;Parent=gene-HMPREF3107_06400;Dbxref=NCBI_GP:OFT01136.1;Name=OFT01136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771560.1;locus_tag=HMPREF3107_06400;product=hypothetical protein;protein_id=OFT01136.1;transl_table=11 KV790806.1 Genbank gene 15466 15747 . + . ID=gene-HMPREF3107_06405;Name=HMPREF3107_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06405 KV790806.1 GeneMarkS+ CDS 15466 15747 . + 0 ID=cds-OFT01137.1;Parent=gene-HMPREF3107_06405;Dbxref=NCBI_GP:OFT01137.1;Name=OFT01137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06405;product=hypothetical protein;protein_id=OFT01137.1;transl_table=11 KV790806.1 Genbank gene 15878 16402 . - . ID=gene-HMPREF3107_06410;Name=HMPREF3107_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06410 KV790806.1 Protein Homology CDS 15878 16402 . - 0 ID=cds-OFT01192.1;Parent=gene-HMPREF3107_06410;Dbxref=NCBI_GP:OFT01192.1;Name=OFT01192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771555.1;locus_tag=HMPREF3107_06410;product=hypothetical protein;protein_id=OFT01192.1;transl_table=11 KV790806.1 Genbank gene 16407 18326 . - . ID=gene-HMPREF3107_06415;Name=HMPREF3107_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06415 KV790806.1 Protein Homology CDS 16407 18326 . - 0 ID=cds-OFT01138.1;Parent=gene-HMPREF3107_06415;Dbxref=NCBI_GP:OFT01138.1;Name=OFT01138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714320.1;locus_tag=HMPREF3107_06415;product=ABC transporter;protein_id=OFT01138.1;transl_table=11 KV790806.1 Genbank gene 18468 18776 . + . ID=gene-HMPREF3107_06420;Name=HMPREF3107_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06420 KV790806.1 Protein Homology CDS 18468 18776 . + 0 ID=cds-OFT01139.1;Parent=gene-HMPREF3107_06420;Dbxref=NCBI_GP:OFT01139.1;Name=OFT01139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427191.1;locus_tag=HMPREF3107_06420;product=monothiol glutaredoxin%2C Grx4 family;protein_id=OFT01139.1;transl_table=11 KV790806.1 Genbank gene 18917 19729 . + . ID=gene-HMPREF3107_06425;Name=HMPREF3107_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06425 KV790806.1 Protein Homology CDS 18917 19729 . + 0 ID=cds-OFT01140.1;Parent=gene-HMPREF3107_06425;Dbxref=NCBI_GP:OFT01140.1;Name=OFT01140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771547.1;locus_tag=HMPREF3107_06425;product=hypothetical protein;protein_id=OFT01140.1;transl_table=11 KV790806.1 Genbank gene 19817 22072 . - . ID=gene-HMPREF3107_06430;Name=HMPREF3107_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06430 KV790806.1 Protein Homology CDS 19817 22072 . - 0 ID=cds-OFT01141.1;Parent=gene-HMPREF3107_06430;Dbxref=NCBI_GP:OFT01141.1;Name=OFT01141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311926.1;locus_tag=HMPREF3107_06430;product=competence protein ComA;protein_id=OFT01141.1;transl_table=11 KV790806.1 Genbank gene 22166 22564 . - . ID=gene-HMPREF3107_06435;Name=HMPREF3107_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06435 KV790806.1 GeneMarkS+ CDS 22166 22564 . - 0 ID=cds-OFT01142.1;Parent=gene-HMPREF3107_06435;Dbxref=NCBI_GP:OFT01142.1;Name=OFT01142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06435;product=hypothetical protein;protein_id=OFT01142.1;transl_table=11 KV790806.1 Genbank gene 22671 23747 . - . ID=gene-HMPREF3107_06440;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF3107_06440 KV790806.1 Protein Homology CDS 22671 23747 . - 0 ID=cds-OFT01143.1;Parent=gene-HMPREF3107_06440;Dbxref=NCBI_GP:OFT01143.1;Name=OFT01143.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003790927.1;locus_tag=HMPREF3107_06440;product=peptide chain release factor 1;protein_id=OFT01143.1;transl_table=11 KV790806.1 Genbank gene 23841 24503 . - . ID=gene-HMPREF3107_06445;Name=HMPREF3107_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06445 KV790806.1 Protein Homology CDS 23841 24503 . - 0 ID=cds-OFT01144.1;Parent=gene-HMPREF3107_06445;Dbxref=NCBI_GP:OFT01144.1;Name=OFT01144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771348.1;locus_tag=HMPREF3107_06445;product=hypothetical protein;protein_id=OFT01144.1;transl_table=11 KV790806.1 Genbank gene 24530 25561 . - . ID=gene-HMPREF3107_06450;Name=HMPREF3107_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06450 KV790806.1 Protein Homology CDS 24530 25561 . - 0 ID=cds-OFT01145.1;Parent=gene-HMPREF3107_06450;Dbxref=NCBI_GP:OFT01145.1;Name=OFT01145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686789.1;locus_tag=HMPREF3107_06450;product=Holliday junction DNA helicase RuvB;protein_id=OFT01145.1;transl_table=11 KV790806.1 Genbank gene 25753 26070 . + . ID=gene-HMPREF3107_06455;Name=HMPREF3107_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06455 KV790806.1 Protein Homology CDS 25753 26070 . + 0 ID=cds-OFT01193.1;Parent=gene-HMPREF3107_06455;Dbxref=NCBI_GP:OFT01193.1;Name=OFT01193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747758.1;locus_tag=HMPREF3107_06455;product=hypothetical protein;protein_id=OFT01193.1;transl_table=11 KV790806.1 Genbank gene 26153 26590 . + . ID=gene-HMPREF3107_06460;Name=HMPREF3107_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06460 KV790806.1 GeneMarkS+ CDS 26153 26590 . + 0 ID=cds-OFT01146.1;Parent=gene-HMPREF3107_06460;Dbxref=NCBI_GP:OFT01146.1;Name=OFT01146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06460;product=hypothetical protein;protein_id=OFT01146.1;transl_table=11 KV790806.1 Genbank gene 26659 26898 . - . ID=gene-HMPREF3107_06465;Name=HMPREF3107_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06465 KV790806.1 Protein Homology CDS 26659 26898 . - 0 ID=cds-OFT01147.1;Parent=gene-HMPREF3107_06465;Dbxref=NCBI_GP:OFT01147.1;Name=OFT01147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771360.1;locus_tag=HMPREF3107_06465;product=hemolysin;protein_id=OFT01147.1;transl_table=11 KV790806.1 Genbank gene 26895 27635 . - . ID=gene-HMPREF3107_06470;Name=HMPREF3107_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06470 KV790806.1 Protein Homology CDS 26895 27635 . - 0 ID=cds-OFT01148.1;Parent=gene-HMPREF3107_06470;Dbxref=NCBI_GP:OFT01148.1;Name=OFT01148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771361.1;locus_tag=HMPREF3107_06470;product=cytidine deaminase;protein_id=OFT01148.1;transl_table=11 KV790806.1 Genbank gene 27756 28676 . - . ID=gene-HMPREF3107_06475;Name=HMPREF3107_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06475 KV790806.1 Protein Homology CDS 27756 28676 . - 0 ID=cds-OFT01149.1;Parent=gene-HMPREF3107_06475;Dbxref=NCBI_GP:OFT01149.1;Name=OFT01149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519428.1;locus_tag=HMPREF3107_06475;product=pseudouridine synthase;protein_id=OFT01149.1;transl_table=11 KV790806.1 Genbank gene 28768 29775 . + . ID=gene-HMPREF3107_06480;Name=HMPREF3107_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06480 KV790806.1 Protein Homology CDS 28768 29775 . + 0 ID=cds-OFT01194.1;Parent=gene-HMPREF3107_06480;Dbxref=NCBI_GP:OFT01194.1;Name=OFT01194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519382.1;locus_tag=HMPREF3107_06480;product=L-asparaginase;protein_id=OFT01194.1;transl_table=11 KV790806.1 Genbank gene 29837 30124 . - . ID=gene-HMPREF3107_06485;Name=HMPREF3107_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06485 KV790806.1 Protein Homology CDS 29837 30124 . - 0 ID=cds-OFT01150.1;Parent=gene-HMPREF3107_06485;Dbxref=NCBI_GP:OFT01150.1;Name=OFT01150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343027.1;locus_tag=HMPREF3107_06485;product=hypothetical protein;protein_id=OFT01150.1;transl_table=11 KV790806.1 Genbank gene 30262 31233 . + . ID=gene-HMPREF3107_06490;Name=HMPREF3107_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06490 KV790806.1 Protein Homology CDS 30262 31233 . + 0 ID=cds-OFT01151.1;Parent=gene-HMPREF3107_06490;Dbxref=NCBI_GP:OFT01151.1;Name=OFT01151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771385.1;locus_tag=HMPREF3107_06490;product=sodium transporter;protein_id=OFT01151.1;transl_table=11 KV790806.1 Genbank gene 31269 32081 . + . ID=gene-HMPREF3107_06495;Name=HMPREF3107_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06495 KV790806.1 Protein Homology CDS 31269 32081 . + 0 ID=cds-OFT01152.1;Parent=gene-HMPREF3107_06495;Dbxref=NCBI_GP:OFT01152.1;Name=OFT01152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771386.1;locus_tag=HMPREF3107_06495;product=hypothetical protein;protein_id=OFT01152.1;transl_table=11 KV790806.1 Genbank gene 32116 32853 . + . ID=gene-HMPREF3107_06500;Name=HMPREF3107_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06500 KV790806.1 Protein Homology CDS 32116 32853 . + 0 ID=cds-OFT01153.1;Parent=gene-HMPREF3107_06500;Dbxref=NCBI_GP:OFT01153.1;Name=OFT01153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771390.1;locus_tag=HMPREF3107_06500;product=orotidine 5'-phosphate decarboxylase;protein_id=OFT01153.1;transl_table=11 KV790806.1 Genbank gene 33005 33952 . + . ID=gene-HMPREF3107_06505;Name=HMPREF3107_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06505 KV790806.1 GeneMarkS+ CDS 33005 33952 . + 0 ID=cds-OFT01154.1;Parent=gene-HMPREF3107_06505;Dbxref=NCBI_GP:OFT01154.1;Name=OFT01154.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06505;product=hypothetical protein;protein_id=OFT01154.1;transl_table=11 KV790806.1 Genbank gene 34081 34485 . + . ID=gene-HMPREF3107_06510;Name=HMPREF3107_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06510 KV790806.1 Protein Homology CDS 34081 34485 . + 0 ID=cds-OFT01155.1;Parent=gene-HMPREF3107_06510;Dbxref=NCBI_GP:OFT01155.1;Name=OFT01155.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342627.1;locus_tag=HMPREF3107_06510;product=hypothetical protein;protein_id=OFT01155.1;transl_table=11 KV790806.1 Genbank gene 34630 35079 . + . ID=gene-HMPREF3107_06515;Name=HMPREF3107_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06515 KV790806.1 Protein Homology CDS 34630 35079 . + 0 ID=cds-OFT01156.1;Parent=gene-HMPREF3107_06515;Dbxref=NCBI_GP:OFT01156.1;Name=OFT01156.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687701.1;locus_tag=HMPREF3107_06515;product=PTS sugar transporter subunit IIA;protein_id=OFT01156.1;transl_table=11 KV790806.1 Genbank gene 35079 36041 . + . ID=gene-HMPREF3107_06520;Name=HMPREF3107_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06520 KV790806.1 Protein Homology CDS 35079 36041 . + 0 ID=cds-OFT01157.1;Parent=gene-HMPREF3107_06520;Dbxref=NCBI_GP:OFT01157.1;Name=OFT01157.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581160.1;locus_tag=HMPREF3107_06520;product=HPr kinase/phosphorylase;protein_id=OFT01157.1;transl_table=11 KV790806.1 Genbank gene 36022 36870 . + . ID=gene-HMPREF3107_06525;Name=HMPREF3107_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06525 KV790806.1 Protein Homology CDS 36022 36870 . + 0 ID=cds-OFT01158.1;Parent=gene-HMPREF3107_06525;Dbxref=NCBI_GP:OFT01158.1;Name=OFT01158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771399.1;locus_tag=HMPREF3107_06525;product=RNase adaptor protein RapZ;protein_id=OFT01158.1;transl_table=11 KV790806.1 Genbank gene 36971 37903 . + . ID=gene-HMPREF3107_06530;Name=HMPREF3107_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06530 KV790806.1 Protein Homology CDS 36971 37903 . + 0 ID=cds-OFT01159.1;Parent=gene-HMPREF3107_06530;Dbxref=NCBI_GP:OFT01159.1;Name=OFT01159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771401.1;locus_tag=HMPREF3107_06530;product=ribosome biogenesis GTPase YlqF;protein_id=OFT01159.1;transl_table=11 KV790806.1 Genbank gene 38019 39254 . + . ID=gene-HMPREF3107_06535;Name=HMPREF3107_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06535 KV790806.1 Protein Homology CDS 38019 39254 . + 0 ID=cds-OFT01160.1;Parent=gene-HMPREF3107_06535;Dbxref=NCBI_GP:OFT01160.1;Name=OFT01160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781527.1;locus_tag=HMPREF3107_06535;product=hypothetical protein;protein_id=OFT01160.1;transl_table=11 KV790806.1 Genbank gene 39324 40052 . + . ID=gene-HMPREF3107_06540;Name=HMPREF3107_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06540 KV790806.1 Protein Homology CDS 39324 40052 . + 0 ID=cds-OFT01161.1;Parent=gene-HMPREF3107_06540;Dbxref=NCBI_GP:OFT01161.1;Name=OFT01161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771408.1;locus_tag=HMPREF3107_06540;product=pyridoxine 5'-phosphate synthase;protein_id=OFT01161.1;transl_table=11 KV790806.1 Genbank gene 40150 41373 . + . ID=gene-HMPREF3107_06545;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=HMPREF3107_06545 KV790806.1 Protein Homology CDS 40150 41373 . + 0 ID=cds-OFT01162.1;Parent=gene-HMPREF3107_06545;Dbxref=NCBI_GP:OFT01162.1;Name=OFT01162.1;gbkey=CDS;gene=glcF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011486842.1;locus_tag=HMPREF3107_06545;product=glycolate oxidase iron-sulfur subunit;protein_id=OFT01162.1;transl_table=11 KV790806.1 Genbank gene 41500 42666 . + . ID=gene-HMPREF3107_06550;Name=HMPREF3107_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06550 KV790806.1 Protein Homology CDS 41500 42666 . + 0 ID=cds-OFT01163.1;Parent=gene-HMPREF3107_06550;Dbxref=NCBI_GP:OFT01163.1;Name=OFT01163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771413.1;locus_tag=HMPREF3107_06550;product=sugar transporter;protein_id=OFT01163.1;transl_table=11 KV790806.1 Genbank gene 42791 43249 . - . ID=gene-HMPREF3107_06555;Name=HMPREF3107_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06555 KV790806.1 Protein Homology CDS 42791 43249 . - 0 ID=cds-OFT01195.1;Parent=gene-HMPREF3107_06555;Dbxref=NCBI_GP:OFT01195.1;Name=OFT01195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239008.1;locus_tag=HMPREF3107_06555;product=cytochrome C;protein_id=OFT01195.1;transl_table=11 KV790806.1 Genbank gene 43341 44093 . + . ID=gene-HMPREF3107_06560;Name=HMPREF3107_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06560 KV790806.1 Protein Homology CDS 43341 44093 . + 0 ID=cds-OFT01164.1;Parent=gene-HMPREF3107_06560;Dbxref=NCBI_GP:OFT01164.1;Name=OFT01164.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426919.1;locus_tag=HMPREF3107_06560;product=NAD(P)-dependent oxidoreductase;protein_id=OFT01164.1;transl_table=11 KV790806.1 Genbank gene 44408 45019 . - . ID=gene-HMPREF3107_06565;Name=HMPREF3107_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06565 KV790806.1 Protein Homology CDS 44408 45019 . - 0 ID=cds-OFT01165.1;Parent=gene-HMPREF3107_06565;Dbxref=NCBI_GP:OFT01165.1;Name=OFT01165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003785701.1;locus_tag=HMPREF3107_06565;product=riboflavin synthase subunit alpha;protein_id=OFT01165.1;transl_table=11 KV790806.1 Genbank gene 45210 46073 . - . ID=gene-HMPREF3107_06570;Name=HMPREF3107_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06570 KV790806.1 Protein Homology CDS 45210 46073 . - 0 ID=cds-OFT01166.1;Parent=gene-HMPREF3107_06570;Dbxref=NCBI_GP:OFT01166.1;Name=OFT01166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519954.1;locus_tag=HMPREF3107_06570;product=tRNA-modifying protein;protein_id=OFT01166.1;transl_table=11 KV790806.1 Genbank gene 46187 46525 . - . ID=gene-HMPREF3107_06575;Name=HMPREF3107_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06575 KV790806.1 Protein Homology CDS 46187 46525 . - 0 ID=cds-OFT01167.1;Parent=gene-HMPREF3107_06575;Dbxref=NCBI_GP:OFT01167.1;Name=OFT01167.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271856.1;locus_tag=HMPREF3107_06575;product=transcriptional regulator;protein_id=OFT01167.1;transl_table=11 KV790806.1 Genbank gene 46687 50583 . + . ID=gene-HMPREF3107_06580;Name=HMPREF3107_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06580 KV790806.1 Protein Homology CDS 46687 50583 . + 0 ID=cds-OFT01168.1;Parent=gene-HMPREF3107_06580;Dbxref=NCBI_GP:OFT01168.1;Name=OFT01168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235254.1;locus_tag=HMPREF3107_06580;product=phosphoribosylformylglycinamidine synthase;protein_id=OFT01168.1;transl_table=11 KV790806.1 Genbank gene 50853 51356 . - . ID=gene-HMPREF3107_06585;Name=HMPREF3107_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06585 KV790806.1 Protein Homology CDS 50853 51356 . - 0 ID=cds-OFT01169.1;Parent=gene-HMPREF3107_06585;Dbxref=NCBI_GP:OFT01169.1;Name=OFT01169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283479.1;locus_tag=HMPREF3107_06585;product=hypothetical protein;protein_id=OFT01169.1;transl_table=11 KV790806.1 Genbank gene 51365 52435 . - . ID=gene-HMPREF3107_06590;Name=HMPREF3107_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06590 KV790806.1 Protein Homology CDS 51365 52435 . - 0 ID=cds-OFT01170.1;Parent=gene-HMPREF3107_06590;Dbxref=NCBI_GP:OFT01170.1;Name=OFT01170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742466.1;locus_tag=HMPREF3107_06590;product=AI-2E family transporter;protein_id=OFT01170.1;transl_table=11 KV790806.1 Genbank gene 52627 53661 . + . ID=gene-HMPREF3107_06595;Name=HMPREF3107_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06595 KV790806.1 Protein Homology CDS 52627 53661 . + 0 ID=cds-OFT01196.1;Parent=gene-HMPREF3107_06595;Dbxref=NCBI_GP:OFT01196.1;Name=OFT01196.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213482.1;locus_tag=HMPREF3107_06595;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=OFT01196.1;transl_table=11 KV790806.1 Genbank gene 53826 56105 . + . ID=gene-HMPREF3107_06600;Name=HMPREF3107_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06600 KV790806.1 Protein Homology CDS 53826 56105 . + 0 ID=cds-OFT01171.1;Parent=gene-HMPREF3107_06600;Dbxref=NCBI_GP:OFT01171.1;Name=OFT01171.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427490.1;locus_tag=HMPREF3107_06600;product=malic enzyme;protein_id=OFT01171.1;transl_table=11 KV790806.1 Genbank gene 56313 56723 . + . ID=gene-HMPREF3107_06605;Name=HMPREF3107_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06605 KV790806.1 Protein Homology CDS 56313 56723 . + 0 ID=cds-OFT01172.1;Parent=gene-HMPREF3107_06605;Dbxref=NCBI_GP:OFT01172.1;Name=OFT01172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283666.1;locus_tag=HMPREF3107_06605;product=HIT domain-containing protein;protein_id=OFT01172.1;transl_table=11 KV790806.1 Genbank gene 56829 58001 . + . ID=gene-HMPREF3107_06610;Name=HMPREF3107_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06610 KV790806.1 Protein Homology CDS 56829 58001 . + 0 ID=cds-OFT01173.1;Parent=gene-HMPREF3107_06610;Dbxref=NCBI_GP:OFT01173.1;Name=OFT01173.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771450.1;locus_tag=HMPREF3107_06610;product=LD-carboxypeptidase;protein_id=OFT01173.1;transl_table=11 KV790806.1 Genbank gene 58079 58999 . + . ID=gene-HMPREF3107_06615;Name=HMPREF3107_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06615 KV790806.1 Protein Homology CDS 58079 58999 . + 0 ID=cds-OFT01174.1;Parent=gene-HMPREF3107_06615;Dbxref=NCBI_GP:OFT01174.1;Name=OFT01174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771451.1;locus_tag=HMPREF3107_06615;product=transporter;protein_id=OFT01174.1;transl_table=11 KV790806.1 Genbank gene 59030 59458 . + . ID=gene-HMPREF3107_06620;Name=HMPREF3107_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06620 KV790806.1 Protein Homology CDS 59030 59458 . + 0 ID=cds-OFT01175.1;Parent=gene-HMPREF3107_06620;Dbxref=NCBI_GP:OFT01175.1;Name=OFT01175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173434.1;locus_tag=HMPREF3107_06620;product=hypothetical protein;protein_id=OFT01175.1;transl_table=11 KV790806.1 Genbank gene 59479 60402 . + . ID=gene-HMPREF3107_06625;Name=HMPREF3107_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06625 KV790806.1 Protein Homology CDS 59479 60402 . + 0 ID=cds-OFT01176.1;Parent=gene-HMPREF3107_06625;Dbxref=NCBI_GP:OFT01176.1;Name=OFT01176.1;Note=RNase BN%3B member of metallo-beta-lactamase family%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003706484.1;locus_tag=HMPREF3107_06625;product=ribonuclease Z;protein_id=OFT01176.1;transl_table=11 KV790806.1 Genbank gene 60432 61169 . + . ID=gene-HMPREF3107_06630;Name=HMPREF3107_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06630 KV790806.1 Protein Homology CDS 60432 61169 . + 0 ID=cds-OFT01177.1;Parent=gene-HMPREF3107_06630;Dbxref=NCBI_GP:OFT01177.1;Name=OFT01177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173436.1;locus_tag=HMPREF3107_06630;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=OFT01177.1;transl_table=11 KV790806.1 Genbank gene 61226 61477 . - . ID=gene-HMPREF3107_06635;Name=HMPREF3107_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06635 KV790806.1 GeneMarkS+ CDS 61226 61477 . - 0 ID=cds-OFT01178.1;Parent=gene-HMPREF3107_06635;Dbxref=NCBI_GP:OFT01178.1;Name=OFT01178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06635;product=hypothetical protein;protein_id=OFT01178.1;transl_table=11 KV790806.1 Genbank gene 61712 62335 . - . ID=gene-HMPREF3107_06640;Name=HMPREF3107_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06640 KV790806.1 Protein Homology CDS 61712 62335 . - 0 ID=cds-OFT01179.1;Parent=gene-HMPREF3107_06640;Dbxref=NCBI_GP:OFT01179.1;Name=OFT01179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003700499.1;locus_tag=HMPREF3107_06640;product=3-hydroxyisobutyrate dehydrogenase;protein_id=OFT01179.1;transl_table=11 KV790806.1 Genbank gene 62372 63052 . - . ID=gene-HMPREF3107_06645;Name=HMPREF3107_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06645 KV790806.1 Protein Homology CDS 62372 63052 . - 0 ID=cds-OFT01180.1;Parent=gene-HMPREF3107_06645;Dbxref=NCBI_GP:OFT01180.1;Name=OFT01180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771466.1;locus_tag=HMPREF3107_06645;product=DUF4440 domain-containing protein;protein_id=OFT01180.1;transl_table=11 KV790806.1 Genbank gene 63097 63582 . - . ID=gene-HMPREF3107_06650;Name=HMPREF3107_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06650 KV790806.1 Protein Homology CDS 63097 63582 . - 0 ID=cds-OFT01181.1;Parent=gene-HMPREF3107_06650;Dbxref=NCBI_GP:OFT01181.1;Name=OFT01181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771471.1;locus_tag=HMPREF3107_06650;product=hypothetical protein;protein_id=OFT01181.1;transl_table=11 KV790806.1 Genbank gene 63746 64918 . - . ID=gene-HMPREF3107_06655;Name=HMPREF3107_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06655 KV790806.1 Protein Homology CDS 63746 64918 . - 0 ID=cds-OFT01182.1;Parent=gene-HMPREF3107_06655;Dbxref=NCBI_GP:OFT01182.1;Name=OFT01182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235442.1;locus_tag=HMPREF3107_06655;product=lipopolysaccharide assembly protein LapB;protein_id=OFT01182.1;transl_table=11 KV790806.1 Genbank gene 64925 65269 . - . ID=gene-HMPREF3107_06660;Name=HMPREF3107_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06660 KV790806.1 Protein Homology CDS 64925 65269 . - 0 ID=cds-OFT01183.1;Parent=gene-HMPREF3107_06660;Dbxref=NCBI_GP:OFT01183.1;Name=OFT01183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241070.1;locus_tag=HMPREF3107_06660;product=hypothetical protein;protein_id=OFT01183.1;transl_table=11 KV790806.1 Genbank gene 65462 66463 . + . ID=gene-HMPREF3107_06665;Name=HMPREF3107_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06665 KV790806.1 Protein Homology CDS 65462 66463 . + 0 ID=cds-OFT01197.1;Parent=gene-HMPREF3107_06665;Dbxref=NCBI_GP:OFT01197.1;Name=OFT01197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771483.1;locus_tag=HMPREF3107_06665;product=branched chain amino acid aminotransferase;protein_id=OFT01197.1;transl_table=11 KV790806.1 Genbank gene 66555 68558 . + . ID=gene-HMPREF3107_06670;Name=HMPREF3107_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06670 KV790806.1 Protein Homology CDS 66555 68558 . + 0 ID=cds-OFT01184.1;Parent=gene-HMPREF3107_06670;Dbxref=NCBI_GP:OFT01184.1;Name=OFT01184.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759174.1;locus_tag=HMPREF3107_06670;product=ATP-dependent DNA helicase Rep;protein_id=OFT01184.1;transl_table=11 KV790806.1 Genbank gene 68681 70174 . - . ID=gene-HMPREF3107_06675;Name=HMPREF3107_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06675 KV790806.1 Protein Homology CDS 68681 70174 . - 0 ID=cds-OFT01185.1;Parent=gene-HMPREF3107_06675;Dbxref=NCBI_GP:OFT01185.1;Name=OFT01185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951081.1;locus_tag=HMPREF3107_06675;product=hypothetical protein;protein_id=OFT01185.1;transl_table=11 KV790806.1 Genbank gene 70290 71237 . - . ID=gene-HMPREF3107_06680;Name=HMPREF3107_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06680 KV790806.1 Protein Homology CDS 70290 71237 . - 0 ID=cds-OFT01186.1;Parent=gene-HMPREF3107_06680;Dbxref=NCBI_GP:OFT01186.1;Name=OFT01186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771492.1;locus_tag=HMPREF3107_06680;product=hypothetical protein;protein_id=OFT01186.1;transl_table=11 KV790806.1 Genbank gene 71427 74873 . - . ID=gene-HMPREF3107_06685;Name=HMPREF3107_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06685 KV790806.1 Protein Homology CDS 71427 74873 . - 0 ID=cds-OFT01187.1;Parent=gene-HMPREF3107_06685;Dbxref=NCBI_GP:OFT01187.1;Name=OFT01187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770928.1;locus_tag=HMPREF3107_06685;product=TonB-dependent receptor;protein_id=OFT01187.1;transl_table=11 KV790806.1 Genbank gene 75194 75664 . + . ID=gene-HMPREF3107_06690;Name=HMPREF3107_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06690 KV790806.1 Protein Homology CDS 75194 75664 . + 0 ID=cds-OFT01188.1;Parent=gene-HMPREF3107_06690;Dbxref=NCBI_GP:OFT01188.1;Name=OFT01188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764386.1;locus_tag=HMPREF3107_06690;product=osmoprotectant transport activator ProQ;protein_id=OFT01188.1;transl_table=11 KV790806.1 Genbank gene 75737 76147 . + . ID=gene-HMPREF3107_06695;Name=HMPREF3107_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06695 KV790806.1 Protein Homology CDS 75737 76147 . + 0 ID=cds-OFT01189.1;Parent=gene-HMPREF3107_06695;Dbxref=NCBI_GP:OFT01189.1;Name=OFT01189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684623.1;locus_tag=HMPREF3107_06695;product=hypothetical protein;protein_id=OFT01189.1;transl_table=11 KV790806.1 Genbank gene 76272 77033 . + . ID=gene-HMPREF3107_06700;Name=HMPREF3107_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06700 KV790806.1 Protein Homology CDS 76272 77033 . + 0 ID=cds-OFT01198.1;Parent=gene-HMPREF3107_06700;Dbxref=NCBI_GP:OFT01198.1;Name=OFT01198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251375.1;locus_tag=HMPREF3107_06700;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=OFT01198.1;transl_table=11 KV790806.1 Genbank gene 77107 77841 . + . ID=gene-HMPREF3107_06705;Name=HMPREF3107_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06705 KV790806.1 Protein Homology CDS 77107 77841 . + 0 ID=cds-OFT01190.1;Parent=gene-HMPREF3107_06705;Dbxref=NCBI_GP:OFT01190.1;Name=OFT01190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688798.1;locus_tag=HMPREF3107_06705;product=hypothetical protein;protein_id=OFT01190.1;transl_table=11 KV790806.1 Genbank gene 78041 79105 . - . ID=gene-HMPREF3107_06710;Name=HMPREF3107_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06710 KV790806.1 Protein Homology CDS 78041 79105 . - 0 ID=cds-OFT01046.1;Parent=gene-HMPREF3107_06710;Dbxref=NCBI_GP:OFT01046.1;Name=OFT01046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771512.1;locus_tag=HMPREF3107_06710;product=DNA polymerase IV;protein_id=OFT01046.1;transl_table=11 KV790806.1 Genbank gene 79199 80500 . - . ID=gene-HMPREF3107_06715;Name=HMPREF3107_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06715 KV790806.1 Protein Homology CDS 79199 80500 . - 0 ID=cds-OFT01047.1;Parent=gene-HMPREF3107_06715;Dbxref=NCBI_GP:OFT01047.1;Name=OFT01047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311973.1;locus_tag=HMPREF3107_06715;product=hypothetical protein;protein_id=OFT01047.1;transl_table=11 KV790806.1 Genbank gene 80583 80843 . - . ID=gene-HMPREF3107_06720;Name=HMPREF3107_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06720 KV790806.1 Protein Homology CDS 80583 80843 . - 0 ID=cds-OFT01048.1;Parent=gene-HMPREF3107_06720;Dbxref=NCBI_GP:OFT01048.1;Name=OFT01048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771518.1;locus_tag=HMPREF3107_06720;product=hypothetical protein;protein_id=OFT01048.1;transl_table=11 KV790806.1 Genbank gene 81132 82613 . - . ID=gene-HMPREF3107_06725;Name=HMPREF3107_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06725 KV790806.1 Protein Homology CDS 81132 82613 . - 0 ID=cds-OFT01049.1;Parent=gene-HMPREF3107_06725;Dbxref=NCBI_GP:OFT01049.1;Name=OFT01049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003789388.1;locus_tag=HMPREF3107_06725;product=phosphate acetyltransferase;protein_id=OFT01049.1;transl_table=11 KV790806.1 Genbank gene 82775 83194 . - . ID=gene-HMPREF3107_06730;Name=HMPREF3107_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06730 KV790806.1 Protein Homology CDS 82775 83194 . - 0 ID=cds-OFT01050.1;Parent=gene-HMPREF3107_06730;Dbxref=NCBI_GP:OFT01050.1;Name=OFT01050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771526.1;locus_tag=HMPREF3107_06730;product=peroxiredoxin;protein_id=OFT01050.1;transl_table=11 KV790806.1 Genbank gene 83198 83689 . - . ID=gene-HMPREF3107_06735;Name=HMPREF3107_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06735 KV790806.1 Protein Homology CDS 83198 83689 . - 0 ID=cds-OFT01051.1;Parent=gene-HMPREF3107_06735;Dbxref=NCBI_GP:OFT01051.1;Name=OFT01051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771529.1;locus_tag=HMPREF3107_06735;product=regulator of ribonuclease activity;protein_id=OFT01051.1;transl_table=11 KV790806.1 Genbank gene 83923 84996 . + . ID=gene-HMPREF3107_06740;Name=HMPREF3107_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06740 KV790806.1 Protein Homology CDS 83923 84996 . + 0 ID=cds-OFT01052.1;Parent=gene-HMPREF3107_06740;Dbxref=NCBI_GP:OFT01052.1;Name=OFT01052.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425012.1;locus_tag=HMPREF3107_06740;product=tRNA N6-adenosine(37)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=OFT01052.1;transl_table=11 KV790806.1 Genbank gene 85066 85641 . + . ID=gene-HMPREF3107_06745;Name=HMPREF3107_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06745 KV790806.1 GeneMarkS+ CDS 85066 85641 . + 0 ID=cds-OFT01053.1;Parent=gene-HMPREF3107_06745;Dbxref=NCBI_GP:OFT01053.1;Name=OFT01053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06745;product=hypothetical protein;protein_id=OFT01053.1;transl_table=11 KV790806.1 Genbank gene 86016 87131 . - . ID=gene-HMPREF3107_06750;Name=HMPREF3107_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06750 KV790806.1 Protein Homology CDS 86016 87131 . - 0 ID=cds-OFT01054.1;Parent=gene-HMPREF3107_06750;Dbxref=NCBI_GP:OFT01054.1;Name=OFT01054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823974.1;locus_tag=HMPREF3107_06750;product=NADH-dependent flavin oxidoreductase;protein_id=OFT01054.1;transl_table=11 KV790806.1 Genbank pseudogene 87186 87523 . - . ID=gene-HMPREF3107_06755;Name=HMPREF3107_06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06755;pseudo=true KV790806.1 Protein Homology CDS 87186 87523 . - 0 ID=cds-HMPREF3107_06755;Parent=gene-HMPREF3107_06755;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743409.1;locus_tag=HMPREF3107_06755;product=RNA polymerase subunit sigma;pseudo=true;transl_table=11 KV790806.1 Genbank gene 87620 88696 . - . ID=gene-HMPREF3107_06760;Name=HMPREF3107_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06760 KV790806.1 Protein Homology CDS 87620 88696 . - 0 ID=cds-OFT01076.1;Parent=gene-HMPREF3107_06760;Dbxref=NCBI_GP:OFT01076.1;Name=OFT01076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010200582.1;locus_tag=HMPREF3107_06760;product=acriflavin resistance protein;protein_id=OFT01076.1;transl_table=11 KV790806.1 Genbank gene 88941 91652 . + . ID=gene-HMPREF3107_06765;Name=HMPREF3107_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06765 KV790806.1 Protein Homology CDS 88941 91652 . + 0 ID=cds-OFT01055.1;Parent=gene-HMPREF3107_06765;Dbxref=NCBI_GP:OFT01055.1;Name=OFT01055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426592.1;locus_tag=HMPREF3107_06765;product=hypothetical protein;protein_id=OFT01055.1;transl_table=11 KV790806.1 Genbank gene 92029 93795 . - . ID=gene-HMPREF3107_06770;Name=HMPREF3107_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06770 KV790806.1 Protein Homology CDS 92029 93795 . - 0 ID=cds-OFT01056.1;Parent=gene-HMPREF3107_06770;Dbxref=NCBI_GP:OFT01056.1;Name=OFT01056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565765.1;locus_tag=HMPREF3107_06770;product=sodium:phosphate symporter;protein_id=OFT01056.1;transl_table=11 KV790806.1 Genbank gene 94089 94544 . + . ID=gene-HMPREF3107_06775;Name=HMPREF3107_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06775 KV790806.1 Protein Homology CDS 94089 94544 . + 0 ID=cds-OFT01057.1;Parent=gene-HMPREF3107_06775;Dbxref=NCBI_GP:OFT01057.1;Name=OFT01057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679671.1;locus_tag=HMPREF3107_06775;product=hypothetical protein;protein_id=OFT01057.1;transl_table=11 KV790806.1 Genbank gene 95023 95112 . - . ID=gene-HMPREF3107_06780;Name=HMPREF3107_06780;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_06780 KV790806.1 tRNAscan-SE tRNA 95023 95112 . - . ID=rna-HMPREF3107_06780;Parent=gene-HMPREF3107_06780;anticodon=(pos:complement(95076..95078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06780;product=tRNA-Ser KV790806.1 tRNAscan-SE exon 95023 95112 . - . ID=exon-HMPREF3107_06780-1;Parent=rna-HMPREF3107_06780;anticodon=(pos:complement(95076..95078));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06780;product=tRNA-Ser KV790806.1 Genbank gene 95135 95225 . - . ID=gene-HMPREF3107_06785;Name=HMPREF3107_06785;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_06785 KV790806.1 tRNAscan-SE tRNA 95135 95225 . - . ID=rna-HMPREF3107_06785;Parent=gene-HMPREF3107_06785;anticodon=(pos:complement(95189..95191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06785;product=tRNA-Ser KV790806.1 tRNAscan-SE exon 95135 95225 . - . ID=exon-HMPREF3107_06785-1;Parent=rna-HMPREF3107_06785;anticodon=(pos:complement(95189..95191));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06785;product=tRNA-Ser KV790806.1 Genbank gene 95286 96062 . - . ID=gene-HMPREF3107_06790;Name=HMPREF3107_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06790 KV790806.1 Protein Homology CDS 95286 96062 . - 0 ID=cds-OFT01058.1;Parent=gene-HMPREF3107_06790;Dbxref=NCBI_GP:OFT01058.1;Name=OFT01058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565762.1;locus_tag=HMPREF3107_06790;product=hypothetical protein;protein_id=OFT01058.1;transl_table=11 KV790806.1 Genbank gene 96125 96691 . - . ID=gene-HMPREF3107_06795;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HMPREF3107_06795 KV790806.1 Protein Homology CDS 96125 96691 . - 0 ID=cds-OFT01059.1;Parent=gene-HMPREF3107_06795;Dbxref=NCBI_GP:OFT01059.1;Name=OFT01059.1;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;gbkey=CDS;gene=dcd;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670287.1;locus_tag=HMPREF3107_06795;product=deoxycytidine triphosphate deaminase;protein_id=OFT01059.1;transl_table=11 KV790806.1 Genbank gene 96767 97183 . - . ID=gene-HMPREF3107_06800;Name=HMPREF3107_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06800 KV790806.1 Protein Homology CDS 96767 97183 . - 0 ID=cds-OFT01060.1;Parent=gene-HMPREF3107_06800;Dbxref=NCBI_GP:OFT01060.1;Name=OFT01060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565760.1;locus_tag=HMPREF3107_06800;product=hypothetical protein;protein_id=OFT01060.1;transl_table=11 KV790806.1 Genbank gene 97180 97989 . - . ID=gene-HMPREF3107_06805;Name=HMPREF3107_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06805 KV790806.1 Protein Homology CDS 97180 97989 . - 0 ID=cds-OFT01061.1;Parent=gene-HMPREF3107_06805;Dbxref=NCBI_GP:OFT01061.1;Name=OFT01061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565759.1;locus_tag=HMPREF3107_06805;product=ADP-ribosylglycohydrolase;protein_id=OFT01061.1;transl_table=11 KV790806.1 Genbank gene 98031 98399 . - . ID=gene-HMPREF3107_06810;Name=HMPREF3107_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06810 KV790806.1 Protein Homology CDS 98031 98399 . - 0 ID=cds-OFT01062.1;Parent=gene-HMPREF3107_06810;Dbxref=NCBI_GP:OFT01062.1;Name=OFT01062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002668882.1;locus_tag=HMPREF3107_06810;product=hypothetical protein;protein_id=OFT01062.1;transl_table=11 KV790806.1 Genbank gene 98420 99319 . - . ID=gene-HMPREF3107_06815;Name=HMPREF3107_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06815 KV790806.1 Protein Homology CDS 98420 99319 . - 0 ID=cds-OFT01063.1;Parent=gene-HMPREF3107_06815;Dbxref=NCBI_GP:OFT01063.1;Name=OFT01063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O87408.1;locus_tag=HMPREF3107_06815;product=recombination-associated protein RdgC;protein_id=OFT01063.1;transl_table=11 KV790806.1 Genbank gene 99444 99519 . + . ID=gene-HMPREF3107_06820;Name=HMPREF3107_06820;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_06820 KV790806.1 tRNAscan-SE tRNA 99444 99519 . + . ID=rna-HMPREF3107_06820;Parent=gene-HMPREF3107_06820;anticodon=(pos:99478..99480);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06820;product=tRNA-Glu KV790806.1 tRNAscan-SE exon 99444 99519 . + . ID=exon-HMPREF3107_06820-1;Parent=rna-HMPREF3107_06820;anticodon=(pos:99478..99480);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_06820;product=tRNA-Glu KV790806.1 Genbank gene 99889 100164 . + . ID=gene-HMPREF3107_06825;Name=HMPREF3107_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06825 KV790806.1 GeneMarkS+ CDS 99889 100164 . + 0 ID=cds-OFT01064.1;Parent=gene-HMPREF3107_06825;Dbxref=NCBI_GP:OFT01064.1;Name=OFT01064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06825;product=hypothetical protein;protein_id=OFT01064.1;transl_table=11 KV790806.1 Genbank gene 101124 102071 . + . ID=gene-HMPREF3107_06830;Name=HMPREF3107_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06830 KV790806.1 GeneMarkS+ CDS 101124 102071 . + 0 ID=cds-OFT01065.1;Parent=gene-HMPREF3107_06830;Dbxref=NCBI_GP:OFT01065.1;Name=OFT01065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06830;product=hypothetical protein;protein_id=OFT01065.1;transl_table=11 KV790806.1 Genbank pseudogene 102211 103857 . + . ID=gene-HMPREF3107_06835;Name=HMPREF3107_06835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06835;pseudo=true KV790806.1 Protein Homology CDS 102211 103857 . + 0 ID=cds-HMPREF3107_06835;Parent=gene-HMPREF3107_06835;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000840804.1;locus_tag=HMPREF3107_06835;product=hypothetical protein;pseudo=true;transl_table=11 KV790806.1 Genbank gene 104011 104196 . - . ID=gene-HMPREF3107_06840;Name=HMPREF3107_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06840 KV790806.1 GeneMarkS+ CDS 104011 104196 . - 0 ID=cds-OFT01066.1;Parent=gene-HMPREF3107_06840;Dbxref=NCBI_GP:OFT01066.1;Name=OFT01066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06840;product=hypothetical protein;protein_id=OFT01066.1;transl_table=11 KV790806.1 Genbank gene 104346 104819 . - . ID=gene-HMPREF3107_06845;Name=HMPREF3107_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06845 KV790806.1 GeneMarkS+ CDS 104346 104819 . - 0 ID=cds-OFT01067.1;Parent=gene-HMPREF3107_06845;Dbxref=NCBI_GP:OFT01067.1;Name=OFT01067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06845;product=hypothetical protein;protein_id=OFT01067.1;transl_table=11 KV790806.1 Genbank gene 104886 105089 . - . ID=gene-HMPREF3107_06850;Name=HMPREF3107_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06850 KV790806.1 GeneMarkS+ CDS 104886 105089 . - 0 ID=cds-OFT01068.1;Parent=gene-HMPREF3107_06850;Dbxref=NCBI_GP:OFT01068.1;Name=OFT01068.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06850;product=hypothetical protein;protein_id=OFT01068.1;transl_table=11 KV790806.1 Genbank gene 105225 105572 . + . ID=gene-HMPREF3107_06855;Name=HMPREF3107_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06855 KV790806.1 GeneMarkS+ CDS 105225 105572 . + 0 ID=cds-OFT01069.1;Parent=gene-HMPREF3107_06855;Dbxref=NCBI_GP:OFT01069.1;Name=OFT01069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06855;product=hypothetical protein;protein_id=OFT01069.1;transl_table=11 KV790806.1 Genbank gene 105663 106163 . - . ID=gene-HMPREF3107_06860;Name=HMPREF3107_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06860 KV790806.1 GeneMarkS+ CDS 105663 106163 . - 0 ID=cds-OFT01070.1;Parent=gene-HMPREF3107_06860;Dbxref=NCBI_GP:OFT01070.1;Name=OFT01070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06860;product=hypothetical protein;protein_id=OFT01070.1;transl_table=11 KV790806.1 Genbank gene 106175 106702 . - . ID=gene-HMPREF3107_06865;Name=HMPREF3107_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06865 KV790806.1 Protein Homology CDS 106175 106702 . - 0 ID=cds-OFT01071.1;Parent=gene-HMPREF3107_06865;Dbxref=NCBI_GP:OFT01071.1;Name=OFT01071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822412.1;locus_tag=HMPREF3107_06865;product=ATP-binding protein;protein_id=OFT01071.1;transl_table=11 KV790806.1 Genbank gene 106837 107202 . - . ID=gene-HMPREF3107_06870;Name=HMPREF3107_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06870 KV790806.1 GeneMarkS+ CDS 106837 107202 . - 0 ID=cds-OFT01072.1;Parent=gene-HMPREF3107_06870;Dbxref=NCBI_GP:OFT01072.1;Name=OFT01072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06870;product=hypothetical protein;protein_id=OFT01072.1;transl_table=11 KV790806.1 Genbank gene 107202 107663 . - . ID=gene-HMPREF3107_06875;Name=HMPREF3107_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06875 KV790806.1 GeneMarkS+ CDS 107202 107663 . - 0 ID=cds-OFT01073.1;Parent=gene-HMPREF3107_06875;Dbxref=NCBI_GP:OFT01073.1;Name=OFT01073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06875;product=hypothetical protein;protein_id=OFT01073.1;transl_table=11 KV790806.1 Genbank gene 107838 108590 . - . ID=gene-HMPREF3107_06880;Name=HMPREF3107_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06880 KV790806.1 GeneMarkS+ CDS 107838 108590 . - 0 ID=cds-OFT01074.1;Parent=gene-HMPREF3107_06880;Dbxref=NCBI_GP:OFT01074.1;Name=OFT01074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06880;product=hypothetical protein;protein_id=OFT01074.1;transl_table=11 KV790806.1 Genbank gene 108595 109014 . - . ID=gene-HMPREF3107_06885;Name=HMPREF3107_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06885 KV790806.1 GeneMarkS+ CDS 108595 109014 . - 0 ID=cds-OFT01075.1;Parent=gene-HMPREF3107_06885;Dbxref=NCBI_GP:OFT01075.1;Name=OFT01075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06885;product=hypothetical protein;protein_id=OFT01075.1;transl_table=11 ##sequence-region KV790807.1 1 9814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790807.1 Genbank region 1 9814 . + . ID=KV790807.1:1..9814;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790807.1 Genbank pseudogene 59 606 . - . ID=gene-HMPREF3107_06890;Name=HMPREF3107_06890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06890;pseudo=true KV790807.1 Protein Homology CDS 59 606 . - 2 ID=cds-HMPREF3107_06890;Parent=gene-HMPREF3107_06890;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002244123.1;locus_tag=HMPREF3107_06890;product=transposase;pseudo=true;transl_table=11 KV790807.1 Genbank pseudogene 627 1149 . - . ID=gene-HMPREF3107_06895;Name=HMPREF3107_06895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06895;pseudo=true KV790807.1 Protein Homology CDS 627 1149 . - 2 ID=cds-HMPREF3107_06895;Parent=gene-HMPREF3107_06895;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247434.1;locus_tag=HMPREF3107_06895;product=transposase;pseudo=true;transl_table=11 KV790807.1 Genbank gene 1348 2037 . + . ID=gene-HMPREF3107_06900;Name=HMPREF3107_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06900 KV790807.1 GeneMarkS+ CDS 1348 2037 . + 0 ID=cds-OFT00995.1;Parent=gene-HMPREF3107_06900;Dbxref=NCBI_GP:OFT00995.1;Name=OFT00995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06900;product=hypothetical protein;protein_id=OFT00995.1;transl_table=11 KV790807.1 Genbank gene 2157 2555 . + . ID=gene-HMPREF3107_06905;Name=HMPREF3107_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06905 KV790807.1 GeneMarkS+ CDS 2157 2555 . + 0 ID=cds-OFT00996.1;Parent=gene-HMPREF3107_06905;Dbxref=NCBI_GP:OFT00996.1;Name=OFT00996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06905;product=hypothetical protein;protein_id=OFT00996.1;transl_table=11 KV790807.1 Genbank gene 2721 3782 . - . ID=gene-HMPREF3107_06910;Name=HMPREF3107_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06910 KV790807.1 Protein Homology CDS 2721 3782 . - 0 ID=cds-OFT00997.1;Parent=gene-HMPREF3107_06910;Dbxref=NCBI_GP:OFT00997.1;Name=OFT00997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774770.1;locus_tag=HMPREF3107_06910;product=nucleotidyltransferase;protein_id=OFT00997.1;transl_table=11 KV790807.1 Genbank gene 3817 4503 . - . ID=gene-HMPREF3107_06915;Name=HMPREF3107_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06915 KV790807.1 Protein Homology CDS 3817 4503 . - 0 ID=cds-OFT00998.1;Parent=gene-HMPREF3107_06915;Dbxref=NCBI_GP:OFT00998.1;Name=OFT00998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743556.1;locus_tag=HMPREF3107_06915;product=cysteine synthase;protein_id=OFT00998.1;transl_table=11 KV790807.1 Genbank gene 4666 5424 . - . ID=gene-HMPREF3107_06920;Name=HMPREF3107_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06920 KV790807.1 Protein Homology CDS 4666 5424 . - 0 ID=cds-OFT00999.1;Parent=gene-HMPREF3107_06920;Dbxref=NCBI_GP:OFT00999.1;Name=OFT00999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758993.1;locus_tag=HMPREF3107_06920;product=hypothetical protein;protein_id=OFT00999.1;transl_table=11 KV790807.1 Genbank gene 5515 6807 . - . ID=gene-HMPREF3107_06925;Name=HMPREF3107_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06925 KV790807.1 Protein Homology CDS 5515 6807 . - 0 ID=cds-OFT01000.1;Parent=gene-HMPREF3107_06925;Dbxref=NCBI_GP:OFT01000.1;Name=OFT01000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688028.1;locus_tag=HMPREF3107_06925;product=histidinol dehydrogenase;protein_id=OFT01000.1;transl_table=11 KV790807.1 Genbank gene 6941 7387 . - . ID=gene-HMPREF3107_06930;Name=HMPREF3107_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06930 KV790807.1 Protein Homology CDS 6941 7387 . - 0 ID=cds-OFT01001.1;Parent=gene-HMPREF3107_06930;Dbxref=NCBI_GP:OFT01001.1;Name=OFT01001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285603.1;locus_tag=HMPREF3107_06930;product=biopolymer transporter ExbD;protein_id=OFT01001.1;transl_table=11 KV790807.1 Genbank gene 7391 8059 . - . ID=gene-HMPREF3107_06935;Name=HMPREF3107_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06935 KV790807.1 Protein Homology CDS 7391 8059 . - 0 ID=cds-OFT01002.1;Parent=gene-HMPREF3107_06935;Dbxref=NCBI_GP:OFT01002.1;Name=OFT01002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426004.1;locus_tag=HMPREF3107_06935;product=biopolymer transporter ExbB;protein_id=OFT01002.1;transl_table=11 KV790807.1 Genbank gene 8144 9058 . - . ID=gene-HMPREF3107_06940;Name=HMPREF3107_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06940 KV790807.1 Protein Homology CDS 8144 9058 . - 0 ID=cds-OFT01003.1;Parent=gene-HMPREF3107_06940;Dbxref=NCBI_GP:OFT01003.1;Name=OFT01003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774782.1;locus_tag=HMPREF3107_06940;product=transporter;protein_id=OFT01003.1;transl_table=11 KV790807.1 Genbank gene 9175 9516 . - . ID=gene-HMPREF3107_06945;Name=HMPREF3107_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06945 KV790807.1 GeneMarkS+ CDS 9175 9516 . - 0 ID=cds-OFT01004.1;Parent=gene-HMPREF3107_06945;Dbxref=NCBI_GP:OFT01004.1;Name=OFT01004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06945;product=hypothetical protein;protein_id=OFT01004.1;transl_table=11 KV790807.1 Genbank gene 9570 9749 . - . ID=gene-HMPREF3107_06950;Name=HMPREF3107_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06950 KV790807.1 GeneMarkS+ CDS 9570 9749 . - 0 ID=cds-OFT01005.1;Parent=gene-HMPREF3107_06950;Dbxref=NCBI_GP:OFT01005.1;Name=OFT01005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06950;product=hypothetical protein;protein_id=OFT01005.1;transl_table=11 ##sequence-region KV790808.1 1 529 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790808.1 Genbank region 1 529 . + . ID=KV790808.1:1..529;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 ##sequence-region KV790809.1 1 34404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790809.1 Genbank region 1 34404 . + . ID=KV790809.1:1..34404;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790809.1 Genbank gene 91 1674 . + . ID=gene-HMPREF3107_06955;Name=HMPREF3107_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06955 KV790809.1 GeneMarkS+ CDS 91 1674 . + 0 ID=cds-OFT00945.1;Parent=gene-HMPREF3107_06955;Dbxref=NCBI_GP:OFT00945.1;Name=OFT00945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_06955;product=hypothetical protein;protein_id=OFT00945.1;transl_table=11 KV790809.1 Genbank gene 1750 2274 . + . ID=gene-HMPREF3107_06960;Name=HMPREF3107_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06960 KV790809.1 Protein Homology CDS 1750 2274 . + 0 ID=cds-OFT00946.1;Parent=gene-HMPREF3107_06960;Dbxref=NCBI_GP:OFT00946.1;Name=OFT00946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426477.1;locus_tag=HMPREF3107_06960;product=cell envelope protein SmpA;protein_id=OFT00946.1;transl_table=11 KV790809.1 Genbank gene 2284 2712 . + . ID=gene-HMPREF3107_06965;Name=HMPREF3107_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06965 KV790809.1 Protein Homology CDS 2284 2712 . + 0 ID=cds-OFT00947.1;Parent=gene-HMPREF3107_06965;Dbxref=NCBI_GP:OFT00947.1;Name=OFT00947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743152.1;locus_tag=HMPREF3107_06965;product=hypothetical protein;protein_id=OFT00947.1;transl_table=11 KV790809.1 Genbank gene 2874 3377 . + . ID=gene-HMPREF3107_06970;Name=HMPREF3107_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06970 KV790809.1 Protein Homology CDS 2874 3377 . + 0 ID=cds-OFT00948.1;Parent=gene-HMPREF3107_06970;Dbxref=NCBI_GP:OFT00948.1;Name=OFT00948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426474.1;locus_tag=HMPREF3107_06970;product=phosphatidylglycerophosphatase;protein_id=OFT00948.1;transl_table=11 KV790809.1 Genbank pseudogene 3685 4878 . + . ID=gene-HMPREF3107_06975;Name=HMPREF3107_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06975;pseudo=true KV790809.1 Protein Homology CDS 3685 4878 . + 0 ID=cds-HMPREF3107_06975;Parent=gene-HMPREF3107_06975;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003706711.1;locus_tag=HMPREF3107_06975;product=ATP-dependent helicase;pseudo=true;transl_table=11 KV790809.1 Genbank pseudogene 6826 8370 . + . ID=gene-HMPREF3107_06980;Name=HMPREF3107_06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06980;pseudo=true KV790809.1 Protein Homology CDS 6826 8370 . + 0 ID=cds-HMPREF3107_06980;Parent=gene-HMPREF3107_06980;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251642.1;locus_tag=HMPREF3107_06980;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 KV790809.1 Genbank gene 8714 10351 . + . ID=gene-HMPREF3107_06985;Name=HMPREF3107_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_06985 KV790809.1 Protein Homology CDS 8714 10351 . + 0 ID=cds-OFT00949.1;Parent=gene-HMPREF3107_06985;Dbxref=NCBI_GP:OFT00949.1;Name=OFT00949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427308.1;locus_tag=HMPREF3107_06985;product=NAD-dependent malic enzyme;protein_id=OFT00949.1;transl_table=11 KV790809.1 Genbank pseudogene 10535 10738 . + . ID=gene-HMPREF3107_06990;Name=HMPREF3107_06990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_06990;pseudo=true KV790809.1 Protein Homology CDS 10535 10738 . + 0 ID=cds-HMPREF3107_06990;Parent=gene-HMPREF3107_06990;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002254507.1;locus_tag=HMPREF3107_06990;product=hypothetical protein;pseudo=true;transl_table=11 KV790809.1 Genbank gene 11215 11487 . - . ID=gene-HMPREF3107_06995;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF3107_06995 KV790809.1 Protein Homology CDS 11215 11487 . - 0 ID=cds-OFT00950.1;Parent=gene-HMPREF3107_06995;Dbxref=NCBI_GP:OFT00950.1;Name=OFT00950.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686478.1;locus_tag=HMPREF3107_06995;product=50S ribosomal protein L27;protein_id=OFT00950.1;transl_table=11 KV790809.1 Genbank gene 11513 11833 . - . ID=gene-HMPREF3107_07000;Name=HMPREF3107_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07000 KV790809.1 Protein Homology CDS 11513 11833 . - 0 ID=cds-OFT00951.1;Parent=gene-HMPREF3107_07000;Dbxref=NCBI_GP:OFT00951.1;Name=OFT00951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341688.1;locus_tag=HMPREF3107_07000;product=50S ribosomal protein L21;protein_id=OFT00951.1;transl_table=11 KV790809.1 Genbank gene 12037 13011 . + . ID=gene-HMPREF3107_07005;Name=HMPREF3107_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07005 KV790809.1 Protein Homology CDS 12037 13011 . + 0 ID=cds-OFT00952.1;Parent=gene-HMPREF3107_07005;Dbxref=NCBI_GP:OFT00952.1;Name=OFT00952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341690.1;locus_tag=HMPREF3107_07005;product=octaprenyl diphosphate synthase;protein_id=OFT00952.1;transl_table=11 KV790809.1 Genbank gene 13050 13124 . + . ID=gene-HMPREF3107_07010;Name=HMPREF3107_07010;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_07010 KV790809.1 tRNAscan-SE tRNA 13050 13124 . + . ID=rna-HMPREF3107_07010;Parent=gene-HMPREF3107_07010;anticodon=(pos:13083..13085);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_07010;product=tRNA-Arg KV790809.1 tRNAscan-SE exon 13050 13124 . + . ID=exon-HMPREF3107_07010-1;Parent=rna-HMPREF3107_07010;anticodon=(pos:13083..13085);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_07010;product=tRNA-Arg KV790809.1 Genbank gene 13268 14488 . - . ID=gene-HMPREF3107_07015;Name=HMPREF3107_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07015 KV790809.1 Protein Homology CDS 13268 14488 . - 0 ID=cds-OFT00953.1;Parent=gene-HMPREF3107_07015;Dbxref=NCBI_GP:OFT00953.1;Name=OFT00953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010356219.1;locus_tag=HMPREF3107_07015;product=diaminopimelate decarboxylase;protein_id=OFT00953.1;transl_table=11 KV790809.1 Genbank gene 14716 15045 . + . ID=gene-HMPREF3107_07020;Name=HMPREF3107_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07020 KV790809.1 Protein Homology CDS 14716 15045 . + 0 ID=cds-OFT00954.1;Parent=gene-HMPREF3107_07020;Dbxref=NCBI_GP:OFT00954.1;Name=OFT00954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775661.1;locus_tag=HMPREF3107_07020;product=iron donor protein CyaY;protein_id=OFT00954.1;transl_table=11 KV790809.1 Genbank gene 15102 15722 . + . ID=gene-HMPREF3107_07025;Name=HMPREF3107_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07025 KV790809.1 GeneMarkS+ CDS 15102 15722 . + 0 ID=cds-OFT00955.1;Parent=gene-HMPREF3107_07025;Dbxref=NCBI_GP:OFT00955.1;Name=OFT00955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07025;product=hypothetical protein;protein_id=OFT00955.1;transl_table=11 KV790809.1 Genbank gene 15751 16650 . - . ID=gene-HMPREF3107_07030;Name=HMPREF3107_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07030 KV790809.1 Protein Homology CDS 15751 16650 . - 0 ID=cds-OFT00956.1;Parent=gene-HMPREF3107_07030;Dbxref=NCBI_GP:OFT00956.1;Name=OFT00956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775667.1;locus_tag=HMPREF3107_07030;product=transporter;protein_id=OFT00956.1;transl_table=11 KV790809.1 Genbank gene 16805 18295 . - . ID=gene-HMPREF3107_07035;Name=HMPREF3107_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07035 KV790809.1 Protein Homology CDS 16805 18295 . - 0 ID=cds-OFT00976.1;Parent=gene-HMPREF3107_07035;Dbxref=NCBI_GP:OFT00976.1;Name=OFT00976.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004953961.1;locus_tag=HMPREF3107_07035;product=C4-dicarboxylate ABC transporter;protein_id=OFT00976.1;transl_table=11 KV790809.1 Genbank gene 18651 18977 . - . ID=gene-HMPREF3107_07040;Name=HMPREF3107_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07040 KV790809.1 Protein Homology CDS 18651 18977 . - 0 ID=cds-OFT00957.1;Parent=gene-HMPREF3107_07040;Dbxref=NCBI_GP:OFT00957.1;Name=OFT00957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284489.1;locus_tag=HMPREF3107_07040;product=peptidylprolyl isomerase;protein_id=OFT00957.1;transl_table=11 KV790809.1 Genbank gene 19095 20939 . - . ID=gene-HMPREF3107_07045;Name=HMPREF3107_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07045 KV790809.1 Protein Homology CDS 19095 20939 . - 0 ID=cds-OFT00958.1;Parent=gene-HMPREF3107_07045;Dbxref=NCBI_GP:OFT00958.1;Name=OFT00958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519175.1;locus_tag=HMPREF3107_07045;product=ribonuclease II;protein_id=OFT00958.1;transl_table=11 KV790809.1 Genbank gene 21016 21432 . - . ID=gene-HMPREF3107_07050;Name=HMPREF3107_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07050 KV790809.1 Protein Homology CDS 21016 21432 . - 0 ID=cds-OFT00959.1;Parent=gene-HMPREF3107_07050;Dbxref=NCBI_GP:OFT00959.1;Name=OFT00959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224742.1;locus_tag=HMPREF3107_07050;product=RNA polymerase-binding protein DksA;protein_id=OFT00959.1;transl_table=11 KV790809.1 Genbank gene 21660 22211 . - . ID=gene-HMPREF3107_07055;Name=HMPREF3107_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07055 KV790809.1 GeneMarkS+ CDS 21660 22211 . - 0 ID=cds-OFT00960.1;Parent=gene-HMPREF3107_07055;Dbxref=NCBI_GP:OFT00960.1;Name=OFT00960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07055;product=hypothetical protein;protein_id=OFT00960.1;transl_table=11 KV790809.1 Genbank gene 22214 23011 . - . ID=gene-HMPREF3107_07060;Name=HMPREF3107_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07060 KV790809.1 Protein Homology CDS 22214 23011 . - 0 ID=cds-OFT00961.1;Parent=gene-HMPREF3107_07060;Dbxref=NCBI_GP:OFT00961.1;Name=OFT00961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747647.1;locus_tag=HMPREF3107_07060;product=pyrroline-5-carboxylate reductase;protein_id=OFT00961.1;transl_table=11 KV790809.1 Genbank gene 23083 23778 . - . ID=gene-HMPREF3107_07065;Name=HMPREF3107_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07065 KV790809.1 Protein Homology CDS 23083 23778 . - 0 ID=cds-OFT00962.1;Parent=gene-HMPREF3107_07065;Dbxref=NCBI_GP:OFT00962.1;Name=OFT00962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775683.1;locus_tag=HMPREF3107_07065;product=YggS family pyridoxal phosphate enzyme;protein_id=OFT00962.1;transl_table=11 KV790809.1 Genbank gene 23908 24945 . + . ID=gene-HMPREF3107_07070;Name=HMPREF3107_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07070 KV790809.1 Protein Homology CDS 23908 24945 . + 0 ID=cds-OFT00963.1;Parent=gene-HMPREF3107_07070;Dbxref=NCBI_GP:OFT00963.1;Name=OFT00963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270746.1;locus_tag=HMPREF3107_07070;product=twitching motility protein PilT;protein_id=OFT00963.1;transl_table=11 KV790809.1 Genbank gene 24966 26198 . + . ID=gene-HMPREF3107_07075;Name=HMPREF3107_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07075 KV790809.1 Protein Homology CDS 24966 26198 . + 0 ID=cds-OFT00964.1;Parent=gene-HMPREF3107_07075;Dbxref=NCBI_GP:OFT00964.1;Name=OFT00964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759784.1;locus_tag=HMPREF3107_07075;product=type IV pili twitching motility protein PilT;protein_id=OFT00964.1;transl_table=11 KV790809.1 Genbank gene 26305 26904 . - . ID=gene-HMPREF3107_07080;Name=HMPREF3107_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07080 KV790809.1 Protein Homology CDS 26305 26904 . - 0 ID=cds-OFT00965.1;Parent=gene-HMPREF3107_07080;Dbxref=NCBI_GP:OFT00965.1;Name=OFT00965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341679.1;locus_tag=HMPREF3107_07080;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=OFT00965.1;transl_table=11 KV790809.1 Genbank gene 26964 27494 . - . ID=gene-HMPREF3107_07085;Name=HMPREF3107_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07085 KV790809.1 Protein Homology CDS 26964 27494 . - 0 ID=cds-OFT00966.1;Parent=gene-HMPREF3107_07085;Dbxref=NCBI_GP:OFT00966.1;Name=OFT00966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009120192.1;locus_tag=HMPREF3107_07085;product=inorganic pyrophosphatase;protein_id=OFT00966.1;transl_table=11 KV790809.1 Genbank gene 27622 27825 . + . ID=gene-HMPREF3107_07090;Name=HMPREF3107_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07090 KV790809.1 Protein Homology CDS 27622 27825 . + 0 ID=cds-OFT00977.1;Parent=gene-HMPREF3107_07090;Dbxref=NCBI_GP:OFT00977.1;Name=OFT00977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775558.1;locus_tag=HMPREF3107_07090;product=hypothetical protein;protein_id=OFT00977.1;transl_table=11 KV790809.1 Genbank gene 27968 28699 . + . ID=gene-HMPREF3107_07095;Name=HMPREF3107_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07095 KV790809.1 Protein Homology CDS 27968 28699 . + 0 ID=cds-OFT00967.1;Parent=gene-HMPREF3107_07095;Dbxref=NCBI_GP:OFT00967.1;Name=OFT00967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822732.1;locus_tag=HMPREF3107_07095;product=30S ribosomal protein S2;protein_id=OFT00967.1;transl_table=11 KV790809.1 Genbank gene 28770 29624 . + . ID=gene-HMPREF3107_07100;Name=HMPREF3107_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07100 KV790809.1 Protein Homology CDS 28770 29624 . + 0 ID=cds-OFT00968.1;Parent=gene-HMPREF3107_07100;Dbxref=NCBI_GP:OFT00968.1;Name=OFT00968.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795802.1;locus_tag=HMPREF3107_07100;product=elongation factor Ts;protein_id=OFT00968.1;transl_table=11 KV790809.1 Genbank gene 29614 29877 . - . ID=gene-HMPREF3107_07105;Name=HMPREF3107_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07105 KV790809.1 GeneMarkS+ CDS 29614 29877 . - 0 ID=cds-OFT00969.1;Parent=gene-HMPREF3107_07105;Dbxref=NCBI_GP:OFT00969.1;Name=OFT00969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07105;product=hypothetical protein;protein_id=OFT00969.1;transl_table=11 KV790809.1 Genbank gene 30084 30659 . - . ID=gene-HMPREF3107_07110;Name=HMPREF3107_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07110 KV790809.1 Protein Homology CDS 30084 30659 . - 0 ID=cds-OFT00970.1;Parent=gene-HMPREF3107_07110;Dbxref=NCBI_GP:OFT00970.1;Name=OFT00970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006559786.1;locus_tag=HMPREF3107_07110;product=aromatic acid decarboxylase;protein_id=OFT00970.1;transl_table=11 KV790809.1 Genbank gene 30717 31307 . - . ID=gene-HMPREF3107_07115;Name=HMPREF3107_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07115 KV790809.1 Protein Homology CDS 30717 31307 . - 0 ID=cds-OFT00971.1;Parent=gene-HMPREF3107_07115;Dbxref=NCBI_GP:OFT00971.1;Name=OFT00971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775906.1;locus_tag=HMPREF3107_07115;product=hypothetical protein;protein_id=OFT00971.1;transl_table=11 KV790809.1 Genbank gene 31600 32175 . + . ID=gene-HMPREF3107_07120;Name=HMPREF3107_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07120 KV790809.1 Protein Homology CDS 31600 32175 . + 0 ID=cds-OFT00972.1;Parent=gene-HMPREF3107_07120;Dbxref=NCBI_GP:OFT00972.1;Name=OFT00972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775574.1;locus_tag=HMPREF3107_07120;product=hypothetical protein;protein_id=OFT00972.1;transl_table=11 KV790809.1 Genbank gene 32175 32909 . + . ID=gene-HMPREF3107_07125;Name=HMPREF3107_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07125 KV790809.1 GeneMarkS+ CDS 32175 32909 . + 0 ID=cds-OFT00973.1;Parent=gene-HMPREF3107_07125;Dbxref=NCBI_GP:OFT00973.1;Name=OFT00973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07125;product=hypothetical protein;protein_id=OFT00973.1;transl_table=11 KV790809.1 Genbank gene 33036 33869 . + . ID=gene-HMPREF3107_07130;Name=HMPREF3107_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07130 KV790809.1 GeneMarkS+ CDS 33036 33869 . + 0 ID=cds-OFT00974.1;Parent=gene-HMPREF3107_07130;Dbxref=NCBI_GP:OFT00974.1;Name=OFT00974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07130;product=hypothetical protein;protein_id=OFT00974.1;transl_table=11 KV790809.1 Genbank gene 33884 34114 . + . ID=gene-HMPREF3107_07135;Name=HMPREF3107_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07135 KV790809.1 Protein Homology CDS 33884 34114 . + 0 ID=cds-OFT00975.1;Parent=gene-HMPREF3107_07135;Dbxref=NCBI_GP:OFT00975.1;Name=OFT00975.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774375.1;locus_tag=HMPREF3107_07135;product=hypothetical protein;protein_id=OFT00975.1;transl_table=11 ##sequence-region KV790810.1 1 29945 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790810.1 Genbank region 1 29945 . + . ID=KV790810.1:1..29945;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790810.1 Genbank gene 85 861 . + . ID=gene-HMPREF3107_07140;Name=HMPREF3107_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07140 KV790810.1 Protein Homology CDS 85 861 . + 0 ID=cds-OFT00898.1;Parent=gene-HMPREF3107_07140;Dbxref=NCBI_GP:OFT00898.1;Name=OFT00898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343165.1;locus_tag=HMPREF3107_07140;product=ferredoxin--NADP(+) reductase;protein_id=OFT00898.1;transl_table=11 KV790810.1 Genbank gene 929 1888 . - . ID=gene-HMPREF3107_07145;Name=HMPREF3107_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07145 KV790810.1 GeneMarkS+ CDS 929 1888 . - 0 ID=cds-OFT00899.1;Parent=gene-HMPREF3107_07145;Dbxref=NCBI_GP:OFT00899.1;Name=OFT00899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07145;product=hypothetical protein;protein_id=OFT00899.1;transl_table=11 KV790810.1 Genbank gene 1979 2797 . - . ID=gene-HMPREF3107_07150;Name=HMPREF3107_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07150 KV790810.1 GeneMarkS+ CDS 1979 2797 . - 0 ID=cds-OFT00900.1;Parent=gene-HMPREF3107_07150;Dbxref=NCBI_GP:OFT00900.1;Name=OFT00900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07150;product=hypothetical protein;protein_id=OFT00900.1;transl_table=11 KV790810.1 Genbank gene 3207 4013 . - . ID=gene-HMPREF3107_07155;Name=HMPREF3107_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07155 KV790810.1 Protein Homology CDS 3207 4013 . - 0 ID=cds-OFT00901.1;Parent=gene-HMPREF3107_07155;Dbxref=NCBI_GP:OFT00901.1;Name=OFT00901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684009.1;locus_tag=HMPREF3107_07155;product=signal transduction protein;protein_id=OFT00901.1;transl_table=11 KV790810.1 Genbank gene 4118 5485 . + . ID=gene-HMPREF3107_07160;Name=HMPREF3107_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07160 KV790810.1 Protein Homology CDS 4118 5485 . + 0 ID=cds-OFT00902.1;Parent=gene-HMPREF3107_07160;Dbxref=NCBI_GP:OFT00902.1;Name=OFT00902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773298.1;locus_tag=HMPREF3107_07160;product=signal recognition particle protein;protein_id=OFT00902.1;transl_table=11 KV790810.1 Genbank gene 5732 6598 . - . ID=gene-HMPREF3107_07165;Name=HMPREF3107_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07165 KV790810.1 Protein Homology CDS 5732 6598 . - 0 ID=cds-OFT00903.1;Parent=gene-HMPREF3107_07165;Dbxref=NCBI_GP:OFT00903.1;Name=OFT00903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712931.1;locus_tag=HMPREF3107_07165;product=ABC transporter substrate-binding protein;protein_id=OFT00903.1;transl_table=11 KV790810.1 Genbank gene 6715 7470 . - . ID=gene-HMPREF3107_07170;Name=HMPREF3107_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07170 KV790810.1 Protein Homology CDS 6715 7470 . - 0 ID=cds-OFT00904.1;Parent=gene-HMPREF3107_07170;Dbxref=NCBI_GP:OFT00904.1;Name=OFT00904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005709358.1;locus_tag=HMPREF3107_07170;product=glutamine ABC transporter ATP-binding protein;protein_id=OFT00904.1;transl_table=11 KV790810.1 Genbank gene 7472 8140 . - . ID=gene-HMPREF3107_07175;Name=HMPREF3107_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07175 KV790810.1 Protein Homology CDS 7472 8140 . - 0 ID=cds-OFT00905.1;Parent=gene-HMPREF3107_07175;Dbxref=NCBI_GP:OFT00905.1;Name=OFT00905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748034.1;locus_tag=HMPREF3107_07175;product=amino acid ABC transporter permease;protein_id=OFT00905.1;transl_table=11 KV790810.1 Genbank gene 8130 8789 . - . ID=gene-HMPREF3107_07180;Name=HMPREF3107_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07180 KV790810.1 Protein Homology CDS 8130 8789 . - 0 ID=cds-OFT00925.1;Parent=gene-HMPREF3107_07180;Dbxref=NCBI_GP:OFT00925.1;Name=OFT00925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784019.1;locus_tag=HMPREF3107_07180;product=amino acid ABC transporter permease;protein_id=OFT00925.1;transl_table=11 KV790810.1 Genbank gene 9032 10663 . - . ID=gene-HMPREF3107_07185;Name=HMPREF3107_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07185 KV790810.1 Protein Homology CDS 9032 10663 . - 0 ID=cds-OFT00906.1;Parent=gene-HMPREF3107_07185;Dbxref=NCBI_GP:OFT00906.1;Name=OFT00906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282589.1;locus_tag=HMPREF3107_07185;product=recombinase RmuC;protein_id=OFT00906.1;transl_table=11 KV790810.1 Genbank gene 10736 11611 . - . ID=gene-HMPREF3107_07190;Name=HMPREF3107_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07190 KV790810.1 Protein Homology CDS 10736 11611 . - 0 ID=cds-OFT00907.1;Parent=gene-HMPREF3107_07190;Dbxref=NCBI_GP:OFT00907.1;Name=OFT00907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773321.1;locus_tag=HMPREF3107_07190;product=ribosome small subunit-dependent GTPase;protein_id=OFT00907.1;transl_table=11 KV790810.1 Genbank gene 11723 12655 . + . ID=gene-HMPREF3107_07195;Name=HMPREF3107_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07195 KV790810.1 Protein Homology CDS 11723 12655 . + 0 ID=cds-OFT00908.1;Parent=gene-HMPREF3107_07195;Dbxref=NCBI_GP:OFT00908.1;Name=OFT00908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003785488.1;locus_tag=HMPREF3107_07195;product=hypothetical protein;protein_id=OFT00908.1;transl_table=11 KV790810.1 Genbank gene 12939 13014 . - . ID=gene-HMPREF3107_07200;Name=HMPREF3107_07200;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_07200 KV790810.1 tRNAscan-SE tRNA 12939 13014 . - . ID=rna-HMPREF3107_07200;Parent=gene-HMPREF3107_07200;anticodon=(pos:complement(12979..12981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_07200;product=tRNA-Phe KV790810.1 tRNAscan-SE exon 12939 13014 . - . ID=exon-HMPREF3107_07200-1;Parent=rna-HMPREF3107_07200;anticodon=(pos:complement(12979..12981));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_07200;product=tRNA-Phe KV790810.1 Genbank gene 13187 13753 . - . ID=gene-HMPREF3107_07205;Name=HMPREF3107_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07205 KV790810.1 Protein Homology CDS 13187 13753 . - 0 ID=cds-OFT00909.1;Parent=gene-HMPREF3107_07205;Dbxref=NCBI_GP:OFT00909.1;Name=OFT00909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312712.1;locus_tag=HMPREF3107_07205;product=oxidoreductase;protein_id=OFT00909.1;transl_table=11 KV790810.1 Genbank gene 13909 14445 . + . ID=gene-HMPREF3107_07210;Name=HMPREF3107_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07210 KV790810.1 Protein Homology CDS 13909 14445 . + 0 ID=cds-OFT00910.1;Parent=gene-HMPREF3107_07210;Dbxref=NCBI_GP:OFT00910.1;Name=OFT00910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581333.1;locus_tag=HMPREF3107_07210;product=phenylphosphate carboxylase subunit delta;protein_id=OFT00910.1;transl_table=11 KV790810.1 Genbank gene 14442 15026 . + . ID=gene-HMPREF3107_07215;Name=HMPREF3107_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07215 KV790810.1 Protein Homology CDS 14442 15026 . + 0 ID=cds-OFT00911.1;Parent=gene-HMPREF3107_07215;Dbxref=NCBI_GP:OFT00911.1;Name=OFT00911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773335.1;locus_tag=HMPREF3107_07215;product=LPS export ABC transporter periplasmic protein LptC;protein_id=OFT00911.1;transl_table=11 KV790810.1 Genbank gene 15004 15528 . + . ID=gene-HMPREF3107_07220;Name=HMPREF3107_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07220 KV790810.1 Protein Homology CDS 15004 15528 . + 0 ID=cds-OFT00912.1;Parent=gene-HMPREF3107_07220;Dbxref=NCBI_GP:OFT00912.1;Name=OFT00912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426420.1;locus_tag=HMPREF3107_07220;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=OFT00912.1;transl_table=11 KV790810.1 Genbank gene 15959 16906 . + . ID=gene-HMPREF3107_07225;Name=HMPREF3107_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07225 KV790810.1 GeneMarkS+ CDS 15959 16906 . + 0 ID=cds-OFT00913.1;Parent=gene-HMPREF3107_07225;Dbxref=NCBI_GP:OFT00913.1;Name=OFT00913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07225;product=hypothetical protein;protein_id=OFT00913.1;transl_table=11 KV790810.1 Genbank gene 17038 18123 . - . ID=gene-HMPREF3107_07230;Name=HMPREF3107_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07230 KV790810.1 Protein Homology CDS 17038 18123 . - 0 ID=cds-OFT00926.1;Parent=gene-HMPREF3107_07230;Dbxref=NCBI_GP:OFT00926.1;Name=OFT00926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310897.1;locus_tag=HMPREF3107_07230;product=riboflavin biosynthesis protein RibD;protein_id=OFT00926.1;transl_table=11 KV790810.1 Genbank gene 18290 18862 . - . ID=gene-HMPREF3107_07235;Name=HMPREF3107_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07235 KV790810.1 Protein Homology CDS 18290 18862 . - 0 ID=cds-OFT00914.1;Parent=gene-HMPREF3107_07235;Dbxref=NCBI_GP:OFT00914.1;Name=OFT00914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773350.1;locus_tag=HMPREF3107_07235;product=hypothetical protein;protein_id=OFT00914.1;transl_table=11 KV790810.1 Genbank gene 19020 20396 . - . ID=gene-HMPREF3107_07240;Name=HMPREF3107_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07240 KV790810.1 Protein Homology CDS 19020 20396 . - 0 ID=cds-OFT00915.1;Parent=gene-HMPREF3107_07240;Dbxref=NCBI_GP:OFT00915.1;Name=OFT00915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252825.1;locus_tag=HMPREF3107_07240;product=Na+/H+ antiporter NhaC;protein_id=OFT00915.1;transl_table=11 KV790810.1 Genbank gene 20500 20685 . + . ID=gene-HMPREF3107_07245;Name=HMPREF3107_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07245 KV790810.1 GeneMarkS+ CDS 20500 20685 . + 0 ID=cds-OFT00916.1;Parent=gene-HMPREF3107_07245;Dbxref=NCBI_GP:OFT00916.1;Name=OFT00916.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07245;product=hypothetical protein;protein_id=OFT00916.1;transl_table=11 KV790810.1 Genbank gene 20701 22725 . + . ID=gene-HMPREF3107_07250;Name=HMPREF3107_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07250 KV790810.1 Protein Homology CDS 20701 22725 . + 0 ID=cds-OFT00917.1;Parent=gene-HMPREF3107_07250;Dbxref=NCBI_GP:OFT00917.1;Name=OFT00917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773356.1;locus_tag=HMPREF3107_07250;product=oligopeptide transporter%2C OPT family;protein_id=OFT00917.1;transl_table=11 KV790810.1 Genbank gene 22903 23253 . + . ID=gene-HMPREF3107_07255;Name=HMPREF3107_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07255 KV790810.1 Protein Homology CDS 22903 23253 . + 0 ID=cds-OFT00918.1;Parent=gene-HMPREF3107_07255;Dbxref=NCBI_GP:OFT00918.1;Name=OFT00918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773359.1;locus_tag=HMPREF3107_07255;product=peptidase;protein_id=OFT00918.1;transl_table=11 KV790810.1 Genbank gene 23324 24394 . - . ID=gene-HMPREF3107_07260;Name=HMPREF3107_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07260 KV790810.1 Protein Homology CDS 23324 24394 . - 0 ID=cds-OFT00919.1;Parent=gene-HMPREF3107_07260;Dbxref=NCBI_GP:OFT00919.1;Name=OFT00919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010358669.1;locus_tag=HMPREF3107_07260;product=LPS export ABC transporter permease LptG;protein_id=OFT00919.1;transl_table=11 KV790810.1 Genbank gene 24391 25503 . - . ID=gene-HMPREF3107_07265;Name=HMPREF3107_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07265 KV790810.1 Protein Homology CDS 24391 25503 . - 0 ID=cds-OFT00920.1;Parent=gene-HMPREF3107_07265;Dbxref=NCBI_GP:OFT00920.1;Name=OFT00920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773364.1;locus_tag=HMPREF3107_07265;product=LPS export ABC transporter permease LptF;protein_id=OFT00920.1;transl_table=11 KV790810.1 Genbank gene 25619 26074 . - . ID=gene-HMPREF3107_07270;Name=HMPREF3107_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07270 KV790810.1 GeneMarkS+ CDS 25619 26074 . - 0 ID=cds-OFT00921.1;Parent=gene-HMPREF3107_07270;Dbxref=NCBI_GP:OFT00921.1;Name=OFT00921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07270;product=hypothetical protein;protein_id=OFT00921.1;transl_table=11 KV790810.1 Genbank gene 26275 27690 . + . ID=gene-HMPREF3107_07275;Name=HMPREF3107_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07275 KV790810.1 Protein Homology CDS 26275 27690 . + 0 ID=cds-OFT00922.1;Parent=gene-HMPREF3107_07275;Dbxref=NCBI_GP:OFT00922.1;Name=OFT00922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822906.1;locus_tag=HMPREF3107_07275;product=aminopeptidase;protein_id=OFT00922.1;transl_table=11 KV790810.1 Genbank gene 27788 28912 . + . ID=gene-HMPREF3107_07280;Name=HMPREF3107_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07280 KV790810.1 GeneMarkS+ CDS 27788 28912 . + 0 ID=cds-OFT00923.1;Parent=gene-HMPREF3107_07280;Dbxref=NCBI_GP:OFT00923.1;Name=OFT00923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07280;product=hypothetical protein;protein_id=OFT00923.1;transl_table=11 KV790810.1 Genbank gene 29181 29867 . + . ID=gene-HMPREF3107_07285;Name=HMPREF3107_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07285 KV790810.1 Protein Homology CDS 29181 29867 . + 0 ID=cds-OFT00924.1;Parent=gene-HMPREF3107_07285;Dbxref=NCBI_GP:OFT00924.1;Name=OFT00924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773377.1;locus_tag=HMPREF3107_07285;product=NAD-dependent protein deacylase;protein_id=OFT00924.1;transl_table=11 ##sequence-region KV790811.1 1 33567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790811.1 Genbank region 1 33567 . + . ID=KV790811.1:1..33567;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790811.1 Genbank gene 117 539 . - . ID=gene-HMPREF3107_07290;Name=HMPREF3107_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07290 KV790811.1 Protein Homology CDS 117 539 . - 0 ID=cds-OFT00774.1;Parent=gene-HMPREF3107_07290;Dbxref=NCBI_GP:OFT00774.1;Name=OFT00774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772305.1;locus_tag=HMPREF3107_07290;product=hypothetical protein;protein_id=OFT00774.1;transl_table=11 KV790811.1 Genbank gene 660 1730 . - . ID=gene-HMPREF3107_07295;Name=HMPREF3107_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07295 KV790811.1 Protein Homology CDS 660 1730 . - 0 ID=cds-OFT00775.1;Parent=gene-HMPREF3107_07295;Dbxref=NCBI_GP:OFT00775.1;Name=OFT00775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173155.1;locus_tag=HMPREF3107_07295;product=sulfate ABC transporter ATP-binding protein;protein_id=OFT00775.1;transl_table=11 KV790811.1 Genbank gene 1727 2578 . - . ID=gene-HMPREF3107_07300;Name=HMPREF3107_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07300 KV790811.1 Protein Homology CDS 1727 2578 . - 0 ID=cds-OFT00776.1;Parent=gene-HMPREF3107_07300;Dbxref=NCBI_GP:OFT00776.1;Name=OFT00776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772309.1;locus_tag=HMPREF3107_07300;product=sulfate ABC transporter permease subunit CysW;protein_id=OFT00776.1;transl_table=11 KV790811.1 Genbank gene 2575 3402 . - . ID=gene-HMPREF3107_07305;Name=HMPREF3107_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07305 KV790811.1 Protein Homology CDS 2575 3402 . - 0 ID=cds-OFT00801.1;Parent=gene-HMPREF3107_07305;Dbxref=NCBI_GP:OFT00801.1;Name=OFT00801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425823.1;locus_tag=HMPREF3107_07305;product=sulfate/thiosulfate transporter subunit;protein_id=OFT00801.1;transl_table=11 KV790811.1 Genbank gene 3718 5061 . + . ID=gene-HMPREF3107_07310;Name=HMPREF3107_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07310 KV790811.1 Protein Homology CDS 3718 5061 . + 0 ID=cds-OFT00777.1;Parent=gene-HMPREF3107_07310;Dbxref=NCBI_GP:OFT00777.1;Name=OFT00777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219139.1;locus_tag=HMPREF3107_07310;product=aldehyde dehydrogenase;protein_id=OFT00777.1;transl_table=11 KV790811.1 Genbank gene 5061 5792 . + . ID=gene-HMPREF3107_07315;Name=HMPREF3107_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07315 KV790811.1 Protein Homology CDS 5061 5792 . + 0 ID=cds-OFT00778.1;Parent=gene-HMPREF3107_07315;Dbxref=NCBI_GP:OFT00778.1;Name=OFT00778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772315.1;locus_tag=HMPREF3107_07315;product=hypothetical protein;protein_id=OFT00778.1;transl_table=11 KV790811.1 Genbank gene 6021 6938 . - . ID=gene-HMPREF3107_07320;Name=HMPREF3107_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07320 KV790811.1 Protein Homology CDS 6021 6938 . - 0 ID=cds-OFT00779.1;Parent=gene-HMPREF3107_07320;Dbxref=NCBI_GP:OFT00779.1;Name=OFT00779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772319.1;locus_tag=HMPREF3107_07320;product=hypothetical protein;protein_id=OFT00779.1;transl_table=11 KV790811.1 Genbank gene 7012 8109 . - . ID=gene-HMPREF3107_07325;Name=HMPREF3107_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07325 KV790811.1 Protein Homology CDS 7012 8109 . - 0 ID=cds-OFT00802.1;Parent=gene-HMPREF3107_07325;Dbxref=NCBI_GP:OFT00802.1;Name=OFT00802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772320.1;locus_tag=HMPREF3107_07325;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=OFT00802.1;transl_table=11 KV790811.1 Genbank gene 8271 8459 . + . ID=gene-HMPREF3107_07330;Name=HMPREF3107_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07330 KV790811.1 GeneMarkS+ CDS 8271 8459 . + 0 ID=cds-OFT00780.1;Parent=gene-HMPREF3107_07330;Dbxref=NCBI_GP:OFT00780.1;Name=OFT00780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07330;product=hypothetical protein;protein_id=OFT00780.1;transl_table=11 KV790811.1 Genbank gene 8456 10225 . + . ID=gene-HMPREF3107_07335;Name=HMPREF3107_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07335 KV790811.1 Protein Homology CDS 8456 10225 . + 0 ID=cds-OFT00781.1;Parent=gene-HMPREF3107_07335;Dbxref=NCBI_GP:OFT00781.1;Name=OFT00781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342830.1;locus_tag=HMPREF3107_07335;product=DNA primase;protein_id=OFT00781.1;transl_table=11 KV790811.1 Genbank gene 10360 11031 . - . ID=gene-HMPREF3107_07340;Name=HMPREF3107_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07340 KV790811.1 Protein Homology CDS 10360 11031 . - 0 ID=cds-OFT00782.1;Parent=gene-HMPREF3107_07340;Dbxref=NCBI_GP:OFT00782.1;Name=OFT00782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117760.1;locus_tag=HMPREF3107_07340;product=hypothetical protein;protein_id=OFT00782.1;transl_table=11 KV790811.1 Genbank gene 11208 13781 . - . ID=gene-HMPREF3107_07345;Name=HMPREF3107_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07345 KV790811.1 Protein Homology CDS 11208 13781 . - 0 ID=cds-OFT00783.1;Parent=gene-HMPREF3107_07345;Dbxref=NCBI_GP:OFT00783.1;Name=OFT00783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766015.1;locus_tag=HMPREF3107_07345;product=ATP-dependent chaperone ClpB;protein_id=OFT00783.1;transl_table=11 KV790811.1 Genbank gene 13961 14398 . + . ID=gene-HMPREF3107_07350;Name=HMPREF3107_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07350 KV790811.1 Protein Homology CDS 13961 14398 . + 0 ID=cds-OFT00784.1;Parent=gene-HMPREF3107_07350;Dbxref=NCBI_GP:OFT00784.1;Name=OFT00784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772331.1;locus_tag=HMPREF3107_07350;product=thiol peroxidase;protein_id=OFT00784.1;transl_table=11 KV790811.1 Genbank gene 14404 15276 . + . ID=gene-HMPREF3107_07355;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=HMPREF3107_07355 KV790811.1 Protein Homology CDS 14404 15276 . + 0 ID=cds-OFT00785.1;Parent=gene-HMPREF3107_07355;Dbxref=NCBI_GP:OFT00785.1;Name=OFT00785.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772333.1;locus_tag=HMPREF3107_07355;product=site-specific tyrosine recombinase XerD;protein_id=OFT00785.1;transl_table=11 KV790811.1 Genbank gene 15379 16710 . + . ID=gene-HMPREF3107_07360;Name=HMPREF3107_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07360 KV790811.1 Protein Homology CDS 15379 16710 . + 0 ID=cds-OFT00786.1;Parent=gene-HMPREF3107_07360;Dbxref=NCBI_GP:OFT00786.1;Name=OFT00786.1;Note=bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein%3B functions in riboflavin synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270937.1;locus_tag=HMPREF3107_07360;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=OFT00786.1;transl_table=11 KV790811.1 Genbank gene 16843 17262 . - . ID=gene-HMPREF3107_07365;Name=HMPREF3107_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07365 KV790811.1 Protein Homology CDS 16843 17262 . - 0 ID=cds-OFT00787.1;Parent=gene-HMPREF3107_07365;Dbxref=NCBI_GP:OFT00787.1;Name=OFT00787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342095.1;locus_tag=HMPREF3107_07365;product=hypothetical protein;protein_id=OFT00787.1;transl_table=11 KV790811.1 Genbank gene 17555 18238 . + . ID=gene-HMPREF3107_07370;Name=HMPREF3107_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07370 KV790811.1 Protein Homology CDS 17555 18238 . + 0 ID=cds-OFT00788.1;Parent=gene-HMPREF3107_07370;Dbxref=NCBI_GP:OFT00788.1;Name=OFT00788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219237.1;locus_tag=HMPREF3107_07370;product=ribulose-phosphate 3-epimerase;protein_id=OFT00788.1;transl_table=11 KV790811.1 Genbank gene 18331 19647 . + . ID=gene-HMPREF3107_07375;Name=HMPREF3107_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07375 KV790811.1 Protein Homology CDS 18331 19647 . + 0 ID=cds-OFT00789.1;Parent=gene-HMPREF3107_07375;Dbxref=NCBI_GP:OFT00789.1;Name=OFT00789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772343.1;locus_tag=HMPREF3107_07375;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=OFT00789.1;transl_table=11 KV790811.1 Genbank gene 19689 21155 . + . ID=gene-HMPREF3107_07380;Name=HMPREF3107_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07380 KV790811.1 GeneMarkS+ CDS 19689 21155 . + 0 ID=cds-OFT00790.1;Parent=gene-HMPREF3107_07380;Dbxref=NCBI_GP:OFT00790.1;Name=OFT00790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07380;product=hypothetical protein;protein_id=OFT00790.1;transl_table=11 KV790811.1 Genbank gene 21271 21768 . + . ID=gene-HMPREF3107_07385;Name=HMPREF3107_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07385 KV790811.1 Protein Homology CDS 21271 21768 . + 0 ID=cds-OFT00791.1;Parent=gene-HMPREF3107_07385;Dbxref=NCBI_GP:OFT00791.1;Name=OFT00791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426528.1;locus_tag=HMPREF3107_07385;product=colicin V production protein;protein_id=OFT00791.1;transl_table=11 KV790811.1 Genbank gene 21787 23325 . + . ID=gene-HMPREF3107_07390;Name=HMPREF3107_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07390 KV790811.1 Protein Homology CDS 21787 23325 . + 0 ID=cds-OFT00792.1;Parent=gene-HMPREF3107_07390;Dbxref=NCBI_GP:OFT00792.1;Name=OFT00792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251190.1;locus_tag=HMPREF3107_07390;product=amidophosphoribosyltransferase;protein_id=OFT00792.1;transl_table=11 KV790811.1 Genbank gene 23396 24028 . + . ID=gene-HMPREF3107_07395;Name=HMPREF3107_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07395 KV790811.1 Protein Homology CDS 23396 24028 . + 0 ID=cds-OFT00793.1;Parent=gene-HMPREF3107_07395;Dbxref=NCBI_GP:OFT00793.1;Name=OFT00793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342088.1;locus_tag=HMPREF3107_07395;product=hypothetical protein;protein_id=OFT00793.1;transl_table=11 KV790811.1 Genbank gene 24119 24550 . - . ID=gene-HMPREF3107_07400;Name=HMPREF3107_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07400 KV790811.1 Protein Homology CDS 24119 24550 . - 0 ID=cds-OFT00794.1;Parent=gene-HMPREF3107_07400;Dbxref=NCBI_GP:OFT00794.1;Name=OFT00794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774335.1;locus_tag=HMPREF3107_07400;product=N utilization substance protein B;protein_id=OFT00794.1;transl_table=11 KV790811.1 Genbank gene 24573 25040 . - . ID=gene-HMPREF3107_07405;Name=HMPREF3107_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07405 KV790811.1 Protein Homology CDS 24573 25040 . - 0 ID=cds-OFT00795.1;Parent=gene-HMPREF3107_07405;Dbxref=NCBI_GP:OFT00795.1;Name=OFT00795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KSU7.1;locus_tag=HMPREF3107_07405;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=OFT00795.1;transl_table=11 KV790811.1 Genbank gene 25162 25479 . - . ID=gene-HMPREF3107_07410;Name=HMPREF3107_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07410 KV790811.1 Protein Homology CDS 25162 25479 . - 0 ID=cds-OFT00796.1;Parent=gene-HMPREF3107_07410;Dbxref=NCBI_GP:OFT00796.1;Name=OFT00796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231998.1;locus_tag=HMPREF3107_07410;product=hypothetical protein;protein_id=OFT00796.1;transl_table=11 KV790811.1 Genbank gene 25553 26434 . - . ID=gene-HMPREF3107_07415;Name=HMPREF3107_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07415 KV790811.1 Protein Homology CDS 25553 26434 . - 0 ID=cds-OFT00803.1;Parent=gene-HMPREF3107_07415;Dbxref=NCBI_GP:OFT00803.1;Name=OFT00803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774327.1;locus_tag=HMPREF3107_07415;product=hypothetical protein;protein_id=OFT00803.1;transl_table=11 KV790811.1 Genbank gene 26796 27326 . - . ID=gene-HMPREF3107_07420;Name=HMPREF3107_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07420 KV790811.1 Protein Homology CDS 26796 27326 . - 0 ID=cds-OFT00797.1;Parent=gene-HMPREF3107_07420;Dbxref=NCBI_GP:OFT00797.1;Name=OFT00797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774377.1;locus_tag=HMPREF3107_07420;product=restriction endonuclease;protein_id=OFT00797.1;transl_table=11 KV790811.1 Genbank gene 27491 28525 . + . ID=gene-HMPREF3107_07425;Name=HMPREF3107_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07425 KV790811.1 Protein Homology CDS 27491 28525 . + 0 ID=cds-OFT00798.1;Parent=gene-HMPREF3107_07425;Dbxref=NCBI_GP:OFT00798.1;Name=OFT00798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003793066.1;locus_tag=HMPREF3107_07425;product=fatty-acid synthase II;protein_id=OFT00798.1;transl_table=11 KV790811.1 Genbank gene 28904 29434 . - . ID=gene-HMPREF3107_07430;Name=HMPREF3107_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07430 KV790811.1 Protein Homology CDS 28904 29434 . - 0 ID=cds-OFT00804.1;Parent=gene-HMPREF3107_07430;Dbxref=NCBI_GP:OFT00804.1;Name=OFT00804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003788294.1;locus_tag=HMPREF3107_07430;product=transposase;protein_id=OFT00804.1;transl_table=11 KV790811.1 Genbank gene 29699 30541 . - . ID=gene-HMPREF3107_07435;Name=HMPREF3107_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07435 KV790811.1 GeneMarkS+ CDS 29699 30541 . - 0 ID=cds-OFT00799.1;Parent=gene-HMPREF3107_07435;Dbxref=NCBI_GP:OFT00799.1;Name=OFT00799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07435;product=hypothetical protein;protein_id=OFT00799.1;transl_table=11 KV790811.1 Genbank gene 30565 33438 . - . ID=gene-HMPREF3107_07440;Name=HMPREF3107_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07440 KV790811.1 Protein Homology CDS 30565 33438 . - 0 ID=cds-OFT00800.1;Parent=gene-HMPREF3107_07440;Dbxref=NCBI_GP:OFT00800.1;Name=OFT00800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765356.1;locus_tag=HMPREF3107_07440;product=excinuclease ABC subunit A;protein_id=OFT00800.1;transl_table=11 ##sequence-region KV790812.1 1 525 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790812.1 Genbank region 1 525 . + . ID=KV790812.1:1..525;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 ##sequence-region KV790813.1 1 14892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790813.1 Genbank region 1 14892 . + . ID=KV790813.1:1..14892;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790813.1 Genbank gene 230 1381 . - . ID=gene-HMPREF3107_07445;Name=HMPREF3107_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07445 KV790813.1 GeneMarkS+ CDS 230 1381 . - 0 ID=cds-OFT00756.1;Parent=gene-HMPREF3107_07445;Dbxref=NCBI_GP:OFT00756.1;Name=OFT00756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07445;product=hypothetical protein;protein_id=OFT00756.1;transl_table=11 KV790813.1 Genbank gene 1396 2844 . - . ID=gene-HMPREF3107_07450;Name=HMPREF3107_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07450 KV790813.1 Protein Homology CDS 1396 2844 . - 0 ID=cds-OFT00757.1;Parent=gene-HMPREF3107_07450;Dbxref=NCBI_GP:OFT00757.1;Name=OFT00757.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269816.1;locus_tag=HMPREF3107_07450;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=OFT00757.1;transl_table=11 KV790813.1 Genbank gene 3208 4128 . - . ID=gene-HMPREF3107_07455;Name=HMPREF3107_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07455 KV790813.1 Protein Homology CDS 3208 4128 . - 0 ID=cds-OFT00758.1;Parent=gene-HMPREF3107_07455;Dbxref=NCBI_GP:OFT00758.1;Name=OFT00758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775154.1;locus_tag=HMPREF3107_07455;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=OFT00758.1;transl_table=11 KV790813.1 Genbank gene 4577 5584 . + . ID=gene-HMPREF3107_07460;Name=HMPREF3107_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07460 KV790813.1 Protein Homology CDS 4577 5584 . + 0 ID=cds-OFT00759.1;Parent=gene-HMPREF3107_07460;Dbxref=NCBI_GP:OFT00759.1;Name=OFT00759.1;Note=NAD-dependent%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B active during glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115319.1;locus_tag=HMPREF3107_07460;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OFT00759.1;transl_table=11 KV790813.1 Genbank gene 5734 6453 . + . ID=gene-HMPREF3107_07465;Name=HMPREF3107_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07465 KV790813.1 Protein Homology CDS 5734 6453 . + 0 ID=cds-OFT00760.1;Parent=gene-HMPREF3107_07465;Dbxref=NCBI_GP:OFT00760.1;Name=OFT00760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775163.1;locus_tag=HMPREF3107_07465;product=bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase;protein_id=OFT00760.1;transl_table=11 KV790813.1 Genbank gene 6520 7200 . - . ID=gene-HMPREF3107_07470;Name=HMPREF3107_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07470 KV790813.1 Protein Homology CDS 6520 7200 . - 0 ID=cds-OFT00761.1;Parent=gene-HMPREF3107_07470;Dbxref=NCBI_GP:OFT00761.1;Name=OFT00761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775165.1;locus_tag=HMPREF3107_07470;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=OFT00761.1;transl_table=11 KV790813.1 Genbank gene 7301 7939 . + . ID=gene-HMPREF3107_07475;Name=HMPREF3107_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07475 KV790813.1 Protein Homology CDS 7301 7939 . + 0 ID=cds-OFT00762.1;Parent=gene-HMPREF3107_07475;Dbxref=NCBI_GP:OFT00762.1;Name=OFT00762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775166.1;locus_tag=HMPREF3107_07475;product=nicotinamidase;protein_id=OFT00762.1;transl_table=11 KV790813.1 Genbank gene 7996 8964 . + . ID=gene-HMPREF3107_07480;Name=HMPREF3107_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07480 KV790813.1 Protein Homology CDS 7996 8964 . + 0 ID=cds-OFT00763.1;Parent=gene-HMPREF3107_07480;Dbxref=NCBI_GP:OFT00763.1;Name=OFT00763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218264.1;locus_tag=HMPREF3107_07480;product=lipopolysaccharide heptosyltransferase I;protein_id=OFT00763.1;transl_table=11 KV790813.1 Genbank gene 8986 9312 . + . ID=gene-HMPREF3107_07485;Name=HMPREF3107_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07485 KV790813.1 GeneMarkS+ CDS 8986 9312 . + 0 ID=cds-OFT00764.1;Parent=gene-HMPREF3107_07485;Dbxref=NCBI_GP:OFT00764.1;Name=OFT00764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07485;product=hypothetical protein;protein_id=OFT00764.1;transl_table=11 KV790813.1 Genbank gene 9549 10295 . + . ID=gene-HMPREF3107_07490;Name=HMPREF3107_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07490 KV790813.1 Protein Homology CDS 9549 10295 . + 0 ID=cds-OFT00765.1;Parent=gene-HMPREF3107_07490;Dbxref=NCBI_GP:OFT00765.1;Name=OFT00765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519189.1;locus_tag=HMPREF3107_07490;product=EtfB protein;protein_id=OFT00765.1;transl_table=11 KV790813.1 Genbank gene 10306 11238 . + . ID=gene-HMPREF3107_07495;Name=HMPREF3107_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07495 KV790813.1 Protein Homology CDS 10306 11238 . + 0 ID=cds-OFT00766.1;Parent=gene-HMPREF3107_07495;Dbxref=NCBI_GP:OFT00766.1;Name=OFT00766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750631.1;locus_tag=HMPREF3107_07495;product=electron transfer flavoprotein subunit beta;protein_id=OFT00766.1;transl_table=11 KV790813.1 Genbank gene 11483 12100 . + . ID=gene-HMPREF3107_07500;Name=HMPREF3107_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07500 KV790813.1 Protein Homology CDS 11483 12100 . + 0 ID=cds-OFT00767.1;Parent=gene-HMPREF3107_07500;Dbxref=NCBI_GP:OFT00767.1;Name=OFT00767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341507.1;locus_tag=HMPREF3107_07500;product=YigZ family protein;protein_id=OFT00767.1;transl_table=11 KV790813.1 Genbank gene 12024 12650 . + . ID=gene-HMPREF3107_07505;Name=HMPREF3107_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07505 KV790813.1 Protein Homology CDS 12024 12650 . + 0 ID=cds-OFT00768.1;Parent=gene-HMPREF3107_07505;Dbxref=NCBI_GP:OFT00768.1;Name=OFT00768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775181.1;locus_tag=HMPREF3107_07505;product=cysteine methyltransferase;protein_id=OFT00768.1;transl_table=11 KV790813.1 Genbank gene 12683 14077 . + . ID=gene-HMPREF3107_07510;Name=HMPREF3107_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07510 KV790813.1 Protein Homology CDS 12683 14077 . + 0 ID=cds-OFT00769.1;Parent=gene-HMPREF3107_07510;Dbxref=NCBI_GP:OFT00769.1;Name=OFT00769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743614.1;locus_tag=HMPREF3107_07510;product=glutamate--tRNA ligase;protein_id=OFT00769.1;transl_table=11 KV790813.1 Genbank pseudogene 14131 14862 . - . ID=gene-HMPREF3107_07515;Name=HMPREF3107_07515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_07515;pseudo=true KV790813.1 Protein Homology CDS 14131 14862 . - 0 ID=cds-HMPREF3107_07515;Parent=gene-HMPREF3107_07515;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761053.1;locus_tag=HMPREF3107_07515;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790814.1 1 40245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790814.1 Genbank region 1 40245 . + . ID=KV790814.1:1..40245;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790814.1 Genbank gene 267 2531 . - . ID=gene-HMPREF3107_07520;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=HMPREF3107_07520 KV790814.1 Protein Homology CDS 267 2531 . - 0 ID=cds-OFT00716.1;Parent=gene-HMPREF3107_07520;Dbxref=NCBI_GP:OFT00716.1;Name=OFT00716.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770905.1;locus_tag=HMPREF3107_07520;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=OFT00716.1;transl_table=11 KV790814.1 Genbank gene 2528 2833 . - . ID=gene-HMPREF3107_07525;Name=HMPREF3107_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07525 KV790814.1 Protein Homology CDS 2528 2833 . - 0 ID=cds-OFT00717.1;Parent=gene-HMPREF3107_07525;Dbxref=NCBI_GP:OFT00717.1;Name=OFT00717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770903.1;locus_tag=HMPREF3107_07525;product=ATP-dependent Clp protease adaptor ClpS;protein_id=OFT00717.1;transl_table=11 KV790814.1 Genbank gene 3092 6496 . + . ID=gene-HMPREF3107_07530;Name=HMPREF3107_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07530 KV790814.1 Protein Homology CDS 3092 6496 . + 0 ID=cds-OFT00718.1;Parent=gene-HMPREF3107_07530;Dbxref=NCBI_GP:OFT00718.1;Name=OFT00718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675241.1;locus_tag=HMPREF3107_07530;product=transcription-repair coupling factor;protein_id=OFT00718.1;transl_table=11 KV790814.1 Genbank gene 6680 7078 . - . ID=gene-HMPREF3107_07535;Name=HMPREF3107_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07535 KV790814.1 Protein Homology CDS 6680 7078 . - 0 ID=cds-OFT00735.1;Parent=gene-HMPREF3107_07535;Dbxref=NCBI_GP:OFT00735.1;Name=OFT00735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710538.1;locus_tag=HMPREF3107_07535;product=hypothetical protein;protein_id=OFT00735.1;transl_table=11 KV790814.1 Genbank gene 7375 8001 . - . ID=gene-HMPREF3107_07540;Name=HMPREF3107_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07540 KV790814.1 Protein Homology CDS 7375 8001 . - 0 ID=cds-OFT00719.1;Parent=gene-HMPREF3107_07540;Dbxref=NCBI_GP:OFT00719.1;Name=OFT00719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686743.1;locus_tag=HMPREF3107_07540;product=hypothetical protein;protein_id=OFT00719.1;transl_table=11 KV790814.1 Genbank gene 8032 8247 . - . ID=gene-HMPREF3107_07545;Name=HMPREF3107_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07545 KV790814.1 GeneMarkS+ CDS 8032 8247 . - 0 ID=cds-OFT00720.1;Parent=gene-HMPREF3107_07545;Dbxref=NCBI_GP:OFT00720.1;Name=OFT00720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07545;product=hypothetical protein;protein_id=OFT00720.1;transl_table=11 KV790814.1 Genbank gene 8499 10166 . - . ID=gene-HMPREF3107_07550;Name=HMPREF3107_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07550 KV790814.1 Protein Homology CDS 8499 10166 . - 0 ID=cds-OFT00721.1;Parent=gene-HMPREF3107_07550;Dbxref=NCBI_GP:OFT00721.1;Name=OFT00721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770888.1;locus_tag=HMPREF3107_07550;product=glucose-6-phosphate isomerase;protein_id=OFT00721.1;transl_table=11 KV790814.1 Genbank gene 10218 11069 . - . ID=gene-HMPREF3107_07555;Name=HMPREF3107_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07555 KV790814.1 Protein Homology CDS 10218 11069 . - 0 ID=cds-OFT00736.1;Parent=gene-HMPREF3107_07555;Dbxref=NCBI_GP:OFT00736.1;Name=OFT00736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283317.1;locus_tag=HMPREF3107_07555;product=transcriptional regulator;protein_id=OFT00736.1;transl_table=11 KV790814.1 Genbank gene 11155 12093 . - . ID=gene-HMPREF3107_07560;Name=HMPREF3107_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07560 KV790814.1 Protein Homology CDS 11155 12093 . - 0 ID=cds-OFT00737.1;Parent=gene-HMPREF3107_07560;Dbxref=NCBI_GP:OFT00737.1;Name=OFT00737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283319.1;locus_tag=HMPREF3107_07560;product=glucokinase;protein_id=OFT00737.1;transl_table=11 KV790814.1 Genbank gene 12122 12808 . - . ID=gene-HMPREF3107_07565;Name=HMPREF3107_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07565 KV790814.1 Protein Homology CDS 12122 12808 . - 0 ID=cds-OFT00722.1;Parent=gene-HMPREF3107_07565;Dbxref=NCBI_GP:OFT00722.1;Name=OFT00722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770883.1;locus_tag=HMPREF3107_07565;product=6-phosphogluconolactonase;protein_id=OFT00722.1;transl_table=11 KV790814.1 Genbank gene 12903 13484 . - . ID=gene-HMPREF3107_07570;Name=HMPREF3107_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07570 KV790814.1 Protein Homology CDS 12903 13484 . - 0 ID=cds-OFT00723.1;Parent=gene-HMPREF3107_07570;Dbxref=NCBI_GP:OFT00723.1;Name=OFT00723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q48DQ3.1;locus_tag=HMPREF3107_07570;product=RNA 2'-phosphotransferase;protein_id=OFT00723.1;transl_table=11 KV790814.1 Genbank gene 13509 13940 . - . ID=gene-HMPREF3107_07575;Name=HMPREF3107_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07575 KV790814.1 GeneMarkS+ CDS 13509 13940 . - 0 ID=cds-OFT00724.1;Parent=gene-HMPREF3107_07575;Dbxref=NCBI_GP:OFT00724.1;Name=OFT00724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07575;product=hypothetical protein;protein_id=OFT00724.1;transl_table=11 KV790814.1 Genbank gene 13999 15432 . - . ID=gene-HMPREF3107_07580;Name=HMPREF3107_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07580 KV790814.1 Protein Homology CDS 13999 15432 . - 0 ID=cds-OFT00725.1;Parent=gene-HMPREF3107_07580;Dbxref=NCBI_GP:OFT00725.1;Name=OFT00725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770878.1;locus_tag=HMPREF3107_07580;product=glucose-6-phosphate dehydrogenase;protein_id=OFT00725.1;transl_table=11 KV790814.1 Genbank gene 15623 17452 . + . ID=gene-HMPREF3107_07585;Name=HMPREF3107_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07585 KV790814.1 Protein Homology CDS 15623 17452 . + 0 ID=cds-OFT00726.1;Parent=gene-HMPREF3107_07585;Dbxref=NCBI_GP:OFT00726.1;Name=OFT00726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003787430.1;locus_tag=HMPREF3107_07585;product=phosphogluconate dehydratase;protein_id=OFT00726.1;transl_table=11 KV790814.1 Genbank gene 17544 18179 . + . ID=gene-HMPREF3107_07590;Name=HMPREF3107_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07590 KV790814.1 Protein Homology CDS 17544 18179 . + 0 ID=cds-OFT00727.1;Parent=gene-HMPREF3107_07590;Dbxref=NCBI_GP:OFT00727.1;Name=OFT00727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389578.1;locus_tag=HMPREF3107_07590;product=2-dehydro-3-deoxyphosphogluconate aldolase;protein_id=OFT00727.1;transl_table=11 KV790814.1 Genbank gene 18190 18510 . + . ID=gene-HMPREF3107_07595;Name=HMPREF3107_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07595 KV790814.1 GeneMarkS+ CDS 18190 18510 . + 0 ID=cds-OFT00728.1;Parent=gene-HMPREF3107_07595;Dbxref=NCBI_GP:OFT00728.1;Name=OFT00728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07595;product=hypothetical protein;protein_id=OFT00728.1;transl_table=11 KV790814.1 Genbank gene 18587 18904 . - . ID=gene-HMPREF3107_07600;Name=HMPREF3107_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07600 KV790814.1 Protein Homology CDS 18587 18904 . - 0 ID=cds-OFT00729.1;Parent=gene-HMPREF3107_07600;Dbxref=NCBI_GP:OFT00729.1;Name=OFT00729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770869.1;locus_tag=HMPREF3107_07600;product=RNA polymerase subunit sigma-54;protein_id=OFT00729.1;transl_table=11 KV790814.1 Genbank gene 18976 20325 . - . ID=gene-HMPREF3107_07605;Name=HMPREF3107_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07605 KV790814.1 Protein Homology CDS 18976 20325 . - 0 ID=cds-OFT00730.1;Parent=gene-HMPREF3107_07605;Dbxref=NCBI_GP:OFT00730.1;Name=OFT00730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780181.1;locus_tag=HMPREF3107_07605;product=RNA polymerase sigma-54 factor;protein_id=OFT00730.1;transl_table=11 KV790814.1 Genbank gene 20414 21151 . - . ID=gene-HMPREF3107_07610;Name=HMPREF3107_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07610 KV790814.1 Protein Homology CDS 20414 21151 . - 0 ID=cds-OFT00731.1;Parent=gene-HMPREF3107_07610;Dbxref=NCBI_GP:OFT00731.1;Name=OFT00731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003789424.1;locus_tag=HMPREF3107_07610;product=ABC transporter ATP-binding protein;protein_id=OFT00731.1;transl_table=11 KV790814.1 Genbank gene 21269 21904 . + . ID=gene-HMPREF3107_07615;Name=HMPREF3107_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07615 KV790814.1 Protein Homology CDS 21269 21904 . + 0 ID=cds-OFT00732.1;Parent=gene-HMPREF3107_07615;Dbxref=NCBI_GP:OFT00732.1;Name=OFT00732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009120044.1;locus_tag=HMPREF3107_07615;product=arylesterase;protein_id=OFT00732.1;transl_table=11 KV790814.1 Genbank gene 21931 22122 . - . ID=gene-HMPREF3107_07620;Name=HMPREF3107_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07620 KV790814.1 GeneMarkS+ CDS 21931 22122 . - 0 ID=cds-OFT00733.1;Parent=gene-HMPREF3107_07620;Dbxref=NCBI_GP:OFT00733.1;Name=OFT00733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07620;product=hypothetical protein;protein_id=OFT00733.1;transl_table=11 KV790814.1 Genbank gene 22242 23366 . - . ID=gene-HMPREF3107_07625;Name=HMPREF3107_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07625 KV790814.1 Protein Homology CDS 22242 23366 . - 0 ID=cds-OFT00734.1;Parent=gene-HMPREF3107_07625;Dbxref=NCBI_GP:OFT00734.1;Name=OFT00734.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770861.1;locus_tag=HMPREF3107_07625;product=glutamate 5-kinase;protein_id=OFT00734.1;transl_table=11 KV790814.1 Genbank gene 23480 23779 . - . ID=gene-HMPREF3107_07630;Name=HMPREF3107_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07630 KV790814.1 Protein Homology CDS 23480 23779 . - 0 ID=cds-OFT00700.1;Parent=gene-HMPREF3107_07630;Dbxref=NCBI_GP:OFT00700.1;Name=OFT00700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002259571.1;locus_tag=HMPREF3107_07630;product=hypothetical protein;protein_id=OFT00700.1;transl_table=11 KV790814.1 Genbank gene 23897 24235 . - . ID=gene-HMPREF3107_07635;Name=HMPREF3107_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07635 KV790814.1 Protein Homology CDS 23897 24235 . - 0 ID=cds-OFT00701.1;Parent=gene-HMPREF3107_07635;Dbxref=NCBI_GP:OFT00701.1;Name=OFT00701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783043.1;locus_tag=HMPREF3107_07635;product=hypothetical protein;protein_id=OFT00701.1;transl_table=11 KV790814.1 Genbank gene 24328 24540 . + . ID=gene-HMPREF3107_07640;Name=HMPREF3107_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07640 KV790814.1 GeneMarkS+ CDS 24328 24540 . + 0 ID=cds-OFT00702.1;Parent=gene-HMPREF3107_07640;Dbxref=NCBI_GP:OFT00702.1;Name=OFT00702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07640;product=hypothetical protein;protein_id=OFT00702.1;transl_table=11 KV790814.1 Genbank gene 24516 25121 . - . ID=gene-HMPREF3107_07645;Name=HMPREF3107_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07645 KV790814.1 Protein Homology CDS 24516 25121 . - 0 ID=cds-OFT00703.1;Parent=gene-HMPREF3107_07645;Dbxref=NCBI_GP:OFT00703.1;Name=OFT00703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427577.1;locus_tag=HMPREF3107_07645;product=septum formation inhibitor Maf;protein_id=OFT00703.1;transl_table=11 KV790814.1 Genbank gene 25118 25963 . - . ID=gene-HMPREF3107_07650;Name=HMPREF3107_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07650 KV790814.1 Protein Homology CDS 25118 25963 . - 0 ID=cds-OFT00704.1;Parent=gene-HMPREF3107_07650;Dbxref=NCBI_GP:OFT00704.1;Name=OFT00704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770852.1;locus_tag=HMPREF3107_07650;product=short-chain dehydrogenase;protein_id=OFT00704.1;transl_table=11 KV790814.1 Genbank gene 26622 27332 . + . ID=gene-HMPREF3107_07655;Name=HMPREF3107_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07655 KV790814.1 Protein Homology CDS 26622 27332 . + 0 ID=cds-OFT00714.1;Parent=gene-HMPREF3107_07655;Dbxref=NCBI_GP:OFT00714.1;Name=OFT00714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757241.1;locus_tag=HMPREF3107_07655;product=hypothetical protein;protein_id=OFT00714.1;transl_table=11 KV790814.1 Genbank gene 27428 28375 . + . ID=gene-HMPREF3107_07660;Name=HMPREF3107_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07660 KV790814.1 Protein Homology CDS 27428 28375 . + 0 ID=cds-OFT00705.1;Parent=gene-HMPREF3107_07660;Dbxref=NCBI_GP:OFT00705.1;Name=OFT00705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770843.1;locus_tag=HMPREF3107_07660;product=hypothetical protein;protein_id=OFT00705.1;transl_table=11 KV790814.1 Genbank gene 28624 31434 . - . ID=gene-HMPREF3107_07665;Name=HMPREF3107_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07665 KV790814.1 Protein Homology CDS 28624 31434 . - 0 ID=cds-OFT00706.1;Parent=gene-HMPREF3107_07665;Dbxref=NCBI_GP:OFT00706.1;Name=OFT00706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212999.1;locus_tag=HMPREF3107_07665;product=TonB-dependent receptor;protein_id=OFT00706.1;transl_table=11 KV790814.1 Genbank gene 31849 33753 . - . ID=gene-HMPREF3107_07670;Name=HMPREF3107_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07670 KV790814.1 Protein Homology CDS 31849 33753 . - 0 ID=cds-OFT00707.1;Parent=gene-HMPREF3107_07670;Dbxref=NCBI_GP:OFT00707.1;Name=OFT00707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449459.1;locus_tag=HMPREF3107_07670;product=NADH-dependent dehydratase;protein_id=OFT00707.1;transl_table=11 KV790814.1 Genbank gene 33864 34073 . + . ID=gene-HMPREF3107_07675;Name=HMPREF3107_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07675 KV790814.1 GeneMarkS+ CDS 33864 34073 . + 0 ID=cds-OFT00708.1;Parent=gene-HMPREF3107_07675;Dbxref=NCBI_GP:OFT00708.1;Name=OFT00708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07675;product=hypothetical protein;protein_id=OFT00708.1;transl_table=11 KV790814.1 Genbank gene 34184 36430 . - . ID=gene-HMPREF3107_07680;Name=HMPREF3107_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07680 KV790814.1 Protein Homology CDS 34184 36430 . - 0 ID=cds-OFT00709.1;Parent=gene-HMPREF3107_07680;Dbxref=NCBI_GP:OFT00709.1;Name=OFT00709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009424881.1;locus_tag=HMPREF3107_07680;product=nitric oxide reductase large subunit;protein_id=OFT00709.1;transl_table=11 KV790814.1 Genbank gene 36779 38008 . + . ID=gene-HMPREF3107_07685;Name=HMPREF3107_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07685 KV790814.1 Protein Homology CDS 36779 38008 . + 0 ID=cds-OFT00710.1;Parent=gene-HMPREF3107_07685;Dbxref=NCBI_GP:OFT00710.1;Name=OFT00710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770823.1;locus_tag=HMPREF3107_07685;product=nitrite reductase%2C copper-containing;protein_id=OFT00710.1;transl_table=11 KV790814.1 Genbank gene 38223 38726 . + . ID=gene-HMPREF3107_07690;Name=HMPREF3107_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07690 KV790814.1 Protein Homology CDS 38223 38726 . + 0 ID=cds-OFT00711.1;Parent=gene-HMPREF3107_07690;Dbxref=NCBI_GP:OFT00711.1;Name=OFT00711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770821.1;locus_tag=HMPREF3107_07690;product=cytochrome c family protein;protein_id=OFT00711.1;transl_table=11 KV790814.1 Genbank gene 38776 39522 . + . ID=gene-HMPREF3107_07695;Name=HMPREF3107_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07695 KV790814.1 Protein Homology CDS 38776 39522 . + 0 ID=cds-OFT00712.1;Parent=gene-HMPREF3107_07695;Dbxref=NCBI_GP:OFT00712.1;Name=OFT00712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282839.1;locus_tag=HMPREF3107_07695;product=hypothetical protein;protein_id=OFT00712.1;transl_table=11 KV790814.1 Genbank gene 39770 40081 . - . ID=gene-HMPREF3107_07700;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF3107_07700 KV790814.1 Protein Homology CDS 39770 40081 . - 0 ID=cds-OFT00713.1;Parent=gene-HMPREF3107_07700;Dbxref=NCBI_GP:OFT00713.1;Name=OFT00713.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014235480.1;locus_tag=HMPREF3107_07700;product=30S ribosomal protein S10;protein_id=OFT00713.1;transl_table=11 ##sequence-region KV790815.1 1 1539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790815.1 Genbank region 1 1539 . + . ID=KV790815.1:1..1539;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790815.1 Genbank pseudogene 352 918 . + . ID=gene-HMPREF3107_07705;Name=HMPREF3107_07705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_07705;pseudo=true KV790815.1 Protein Homology CDS 352 918 . + 0 ID=cds-HMPREF3107_07705;Parent=gene-HMPREF3107_07705;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755178.1;locus_tag=HMPREF3107_07705;product=ATPase;pseudo=true;transl_table=11 KV790815.1 Genbank gene 1107 1526 . + . ID=gene-HMPREF3107_07710;Name=HMPREF3107_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07710 KV790815.1 GeneMarkS+ CDS 1107 1526 . + 0 ID=cds-OFT00669.1;Parent=gene-HMPREF3107_07710;Dbxref=NCBI_GP:OFT00669.1;Name=OFT00669.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07710;product=hypothetical protein;protein_id=OFT00669.1;transl_table=11 ##sequence-region KV790816.1 1 42578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790816.1 Genbank region 1 42578 . + . ID=KV790816.1:1..42578;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790816.1 Genbank gene 194 1171 . - . ID=gene-HMPREF3107_07715;Name=HMPREF3107_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07715 KV790816.1 Protein Homology CDS 194 1171 . - 0 ID=cds-OFT00563.1;Parent=gene-HMPREF3107_07715;Dbxref=NCBI_GP:OFT00563.1;Name=OFT00563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771602.1;locus_tag=HMPREF3107_07715;product=fructose-bisphosphatase;protein_id=OFT00563.1;transl_table=11 KV790816.1 Genbank gene 1405 1704 . + . ID=gene-HMPREF3107_07720;Name=HMPREF3107_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07720 KV790816.1 Protein Homology CDS 1405 1704 . + 0 ID=cds-OFT00564.1;Parent=gene-HMPREF3107_07720;Dbxref=NCBI_GP:OFT00564.1;Name=OFT00564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283285.1;locus_tag=HMPREF3107_07720;product=preprotein translocase subunit YajC;protein_id=OFT00564.1;transl_table=11 KV790816.1 Genbank gene 1779 3626 . + . ID=gene-HMPREF3107_07725;Name=HMPREF3107_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07725 KV790816.1 Protein Homology CDS 1779 3626 . + 0 ID=cds-OFT00565.1;Parent=gene-HMPREF3107_07725;Dbxref=NCBI_GP:OFT00565.1;Name=OFT00565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771604.1;locus_tag=HMPREF3107_07725;product=preprotein translocase subunit SecD;protein_id=OFT00565.1;transl_table=11 KV790816.1 Genbank gene 3629 4564 . + . ID=gene-HMPREF3107_07730;Name=HMPREF3107_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07730 KV790816.1 Protein Homology CDS 3629 4564 . + 0 ID=cds-OFT00566.1;Parent=gene-HMPREF3107_07730;Dbxref=NCBI_GP:OFT00566.1;Name=OFT00566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219655.1;locus_tag=HMPREF3107_07730;product=preprotein translocase subunit SecF;protein_id=OFT00566.1;transl_table=11 KV790816.1 Genbank gene 4631 4831 . - . ID=gene-HMPREF3107_07735;Name=HMPREF3107_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07735 KV790816.1 GeneMarkS+ CDS 4631 4831 . - 0 ID=cds-OFT00567.1;Parent=gene-HMPREF3107_07735;Dbxref=NCBI_GP:OFT00567.1;Name=OFT00567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07735;product=hypothetical protein;protein_id=OFT00567.1;transl_table=11 KV790816.1 Genbank gene 4852 6327 . + . ID=gene-HMPREF3107_07740;Name=HMPREF3107_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07740 KV790816.1 Protein Homology CDS 4852 6327 . + 0 ID=cds-OFT00568.1;Parent=gene-HMPREF3107_07740;Dbxref=NCBI_GP:OFT00568.1;Name=OFT00568.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173174.1;locus_tag=HMPREF3107_07740;product=anthranilate synthase;protein_id=OFT00568.1;transl_table=11 KV790816.1 Genbank pseudogene 6551 6841 . + . ID=gene-HMPREF3107_07745;Name=HMPREF3107_07745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_07745;pseudo=true KV790816.1 Protein Homology CDS 6551 6841 . + 0 ID=cds-HMPREF3107_07745;Parent=gene-HMPREF3107_07745;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742505.1;locus_tag=HMPREF3107_07745;product=GIY-YIG nuclease;pseudo=true;transl_table=11 KV790816.1 Genbank gene 7048 8184 . + . ID=gene-HMPREF3107_07750;Name=HMPREF3107_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07750 KV790816.1 Protein Homology CDS 7048 8184 . + 0 ID=cds-OFT00569.1;Parent=gene-HMPREF3107_07750;Dbxref=NCBI_GP:OFT00569.1;Name=OFT00569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286088.1;locus_tag=HMPREF3107_07750;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=OFT00569.1;transl_table=11 KV790816.1 Genbank gene 8334 8822 . + . ID=gene-HMPREF3107_07755;Name=HMPREF3107_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07755 KV790816.1 Protein Homology CDS 8334 8822 . + 0 ID=cds-OFT00570.1;Parent=gene-HMPREF3107_07755;Dbxref=NCBI_GP:OFT00570.1;Name=OFT00570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118846.1;locus_tag=HMPREF3107_07755;product=GNAT family acetyltransferase;protein_id=OFT00570.1;transl_table=11 KV790816.1 Genbank gene 8957 9310 . - . ID=gene-HMPREF3107_07760;Name=HMPREF3107_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07760 KV790816.1 Protein Homology CDS 8957 9310 . - 0 ID=cds-OFT00601.1;Parent=gene-HMPREF3107_07760;Dbxref=NCBI_GP:OFT00601.1;Name=OFT00601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217778.1;locus_tag=HMPREF3107_07760;product=cytochrome B;protein_id=OFT00601.1;transl_table=11 KV790816.1 Genbank gene 9955 11214 . + . ID=gene-HMPREF3107_07765;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=HMPREF3107_07765 KV790816.1 Protein Homology CDS 9955 11214 . + 0 ID=cds-OFT00571.1;Parent=gene-HMPREF3107_07765;Dbxref=NCBI_GP:OFT00571.1;Name=OFT00571.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823056.1;locus_tag=HMPREF3107_07765;product=transcription termination factor Rho;protein_id=OFT00571.1;transl_table=11 KV790816.1 Genbank gene 11340 11711 . - . ID=gene-HMPREF3107_07770;Name=HMPREF3107_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07770 KV790816.1 Protein Homology CDS 11340 11711 . - 0 ID=cds-OFT00572.1;Parent=gene-HMPREF3107_07770;Dbxref=NCBI_GP:OFT00572.1;Name=OFT00572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777800.1;locus_tag=HMPREF3107_07770;product=hypothetical protein;protein_id=OFT00572.1;transl_table=11 KV790816.1 Genbank gene 11944 13203 . - . ID=gene-HMPREF3107_07775;Name=HMPREF3107_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07775 KV790816.1 Protein Homology CDS 11944 13203 . - 0 ID=cds-OFT00573.1;Parent=gene-HMPREF3107_07775;Dbxref=NCBI_GP:OFT00573.1;Name=OFT00573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771625.1;locus_tag=HMPREF3107_07775;product=hypothetical protein;protein_id=OFT00573.1;transl_table=11 KV790816.1 Genbank gene 13336 14139 . - . ID=gene-HMPREF3107_07780;Name=HMPREF3107_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07780 KV790816.1 Protein Homology CDS 13336 14139 . - 0 ID=cds-OFT00574.1;Parent=gene-HMPREF3107_07780;Dbxref=NCBI_GP:OFT00574.1;Name=OFT00574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218962.1;locus_tag=HMPREF3107_07780;product=ABC transporter substrate-binding protein;protein_id=OFT00574.1;transl_table=11 KV790816.1 Genbank gene 14197 14445 . - . ID=gene-HMPREF3107_07785;Name=HMPREF3107_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07785 KV790816.1 Protein Homology CDS 14197 14445 . - 0 ID=cds-OFT00575.1;Parent=gene-HMPREF3107_07785;Dbxref=NCBI_GP:OFT00575.1;Name=OFT00575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234140.1;locus_tag=HMPREF3107_07785;product=hypothetical protein;protein_id=OFT00575.1;transl_table=11 KV790816.1 Genbank gene 14511 15233 . + . ID=gene-HMPREF3107_07790;Name=HMPREF3107_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07790 KV790816.1 Protein Homology CDS 14511 15233 . + 0 ID=cds-OFT00576.1;Parent=gene-HMPREF3107_07790;Dbxref=NCBI_GP:OFT00576.1;Name=OFT00576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425096.1;locus_tag=HMPREF3107_07790;product=hypothetical protein;protein_id=OFT00576.1;transl_table=11 KV790816.1 Genbank gene 15292 16026 . + . ID=gene-HMPREF3107_07795;Name=HMPREF3107_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07795 KV790816.1 Protein Homology CDS 15292 16026 . + 0 ID=cds-OFT00577.1;Parent=gene-HMPREF3107_07795;Dbxref=NCBI_GP:OFT00577.1;Name=OFT00577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283508.1;locus_tag=HMPREF3107_07795;product=DNA repair protein RecO;protein_id=OFT00577.1;transl_table=11 KV790816.1 Genbank gene 16099 16716 . + . ID=gene-HMPREF3107_07800;Name=HMPREF3107_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07800 KV790816.1 Protein Homology CDS 16099 16716 . + 0 ID=cds-OFT00602.1;Parent=gene-HMPREF3107_07800;Dbxref=NCBI_GP:OFT00602.1;Name=OFT00602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116367.1;locus_tag=HMPREF3107_07800;product=segregation and condensation protein B;protein_id=OFT00602.1;transl_table=11 KV790816.1 Genbank gene 16823 17890 . + . ID=gene-HMPREF3107_07805;Name=HMPREF3107_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07805 KV790816.1 Protein Homology CDS 16823 17890 . + 0 ID=cds-OFT00578.1;Parent=gene-HMPREF3107_07805;Dbxref=NCBI_GP:OFT00578.1;Name=OFT00578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680709.1;locus_tag=HMPREF3107_07805;product=23S rRNA pseudouridylate synthase B;protein_id=OFT00578.1;transl_table=11 KV790816.1 Genbank gene 17964 18881 . + . ID=gene-HMPREF3107_07810;Name=HMPREF3107_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07810 KV790816.1 GeneMarkS+ CDS 17964 18881 . + 0 ID=cds-OFT00579.1;Parent=gene-HMPREF3107_07810;Dbxref=NCBI_GP:OFT00579.1;Name=OFT00579.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07810;product=hypothetical protein;protein_id=OFT00579.1;transl_table=11 KV790816.1 Genbank gene 18960 21017 . + . ID=gene-HMPREF3107_07815;Name=HMPREF3107_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07815 KV790816.1 GeneMarkS+ CDS 18960 21017 . + 0 ID=cds-OFT00580.1;Parent=gene-HMPREF3107_07815;Dbxref=NCBI_GP:OFT00580.1;Name=OFT00580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07815;product=hypothetical protein;protein_id=OFT00580.1;transl_table=11 KV790816.1 Genbank gene 21164 22549 . - . ID=gene-HMPREF3107_07820;Name=HMPREF3107_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07820 KV790816.1 Protein Homology CDS 21164 22549 . - 0 ID=cds-OFT00581.1;Parent=gene-HMPREF3107_07820;Dbxref=NCBI_GP:OFT00581.1;Name=OFT00581.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771644.1;locus_tag=HMPREF3107_07820;product=DNA repair protein RadA;protein_id=OFT00581.1;transl_table=11 KV790816.1 Genbank gene 22630 23184 . - . ID=gene-HMPREF3107_07825;Name=HMPREF3107_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07825 KV790816.1 Protein Homology CDS 22630 23184 . - 0 ID=cds-OFT00582.1;Parent=gene-HMPREF3107_07825;Dbxref=NCBI_GP:OFT00582.1;Name=OFT00582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771646.1;locus_tag=HMPREF3107_07825;product=hypothetical protein;protein_id=OFT00582.1;transl_table=11 KV790816.1 Genbank gene 23305 24027 . - . ID=gene-HMPREF3107_07830;Name=HMPREF3107_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07830 KV790816.1 Protein Homology CDS 23305 24027 . - 0 ID=cds-OFT00583.1;Parent=gene-HMPREF3107_07830;Dbxref=NCBI_GP:OFT00583.1;Name=OFT00583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771648.1;locus_tag=HMPREF3107_07830;product=NAD(P)-dependent oxidoreductase;protein_id=OFT00583.1;transl_table=11 KV790816.1 Genbank gene 24119 25258 . - . ID=gene-HMPREF3107_07835;Name=HMPREF3107_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07835 KV790816.1 Protein Homology CDS 24119 25258 . - 0 ID=cds-OFT00584.1;Parent=gene-HMPREF3107_07835;Dbxref=NCBI_GP:OFT00584.1;Name=OFT00584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283658.1;locus_tag=HMPREF3107_07835;product=polyamine ABC transporter substrate-binding protein;protein_id=OFT00584.1;transl_table=11 KV790816.1 Genbank gene 25577 26098 . + . ID=gene-HMPREF3107_07840;Name=HMPREF3107_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07840 KV790816.1 Protein Homology CDS 25577 26098 . + 0 ID=cds-OFT00603.1;Parent=gene-HMPREF3107_07840;Dbxref=NCBI_GP:OFT00603.1;Name=OFT00603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771657.1;locus_tag=HMPREF3107_07840;product=RNA pyrophosphohydrolase;protein_id=OFT00603.1;transl_table=11 KV790816.1 Genbank gene 26268 28655 . - . ID=gene-HMPREF3107_07845;Name=HMPREF3107_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07845 KV790816.1 Protein Homology CDS 26268 28655 . - 0 ID=cds-OFT00585.1;Parent=gene-HMPREF3107_07845;Dbxref=NCBI_GP:OFT00585.1;Name=OFT00585.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753989.1;locus_tag=HMPREF3107_07845;product=phosphoenolpyruvate synthase;protein_id=OFT00585.1;transl_table=11 KV790816.1 Genbank gene 29078 29896 . + . ID=gene-HMPREF3107_07850;Name=HMPREF3107_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07850 KV790816.1 Protein Homology CDS 29078 29896 . + 0 ID=cds-OFT00586.1;Parent=gene-HMPREF3107_07850;Dbxref=NCBI_GP:OFT00586.1;Name=OFT00586.1;Note=mediates the activation of PEP synthetase by an inorganic phosphate pyrophosphorylation and inactivates PEP synthetase by ADP-dependent phosphorylation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009424978.1;locus_tag=HMPREF3107_07850;product=phosphoenolpyruvate synthase regulatory protein;protein_id=OFT00586.1;transl_table=11 KV790816.1 Genbank gene 29973 30197 . - . ID=gene-HMPREF3107_07855;Name=HMPREF3107_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07855 KV790816.1 Protein Homology CDS 29973 30197 . - 0 ID=cds-OFT00604.1;Parent=gene-HMPREF3107_07855;Dbxref=NCBI_GP:OFT00604.1;Name=OFT00604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214174.1;locus_tag=HMPREF3107_07855;product=hypothetical protein;protein_id=OFT00604.1;transl_table=11 KV790816.1 Genbank gene 30334 30954 . + . ID=gene-HMPREF3107_07860;Name=HMPREF3107_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07860 KV790816.1 Protein Homology CDS 30334 30954 . + 0 ID=cds-OFT00587.1;Parent=gene-HMPREF3107_07860;Dbxref=NCBI_GP:OFT00587.1;Name=OFT00587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771671.1;locus_tag=HMPREF3107_07860;product=cryptic protein cnp1;protein_id=OFT00587.1;transl_table=11 KV790816.1 Genbank gene 31210 32001 . - . ID=gene-HMPREF3107_07865;Name=HMPREF3107_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07865 KV790816.1 Protein Homology CDS 31210 32001 . - 0 ID=cds-OFT00588.1;Parent=gene-HMPREF3107_07865;Dbxref=NCBI_GP:OFT00588.1;Name=OFT00588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771673.1;locus_tag=HMPREF3107_07865;product=NAD(+) synthetase;protein_id=OFT00588.1;transl_table=11 KV790816.1 Genbank gene 32076 32258 . - . ID=gene-HMPREF3107_07870;Name=HMPREF3107_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07870 KV790816.1 Protein Homology CDS 32076 32258 . - 0 ID=cds-OFT00589.1;Parent=gene-HMPREF3107_07870;Dbxref=NCBI_GP:OFT00589.1;Name=OFT00589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771675.1;locus_tag=HMPREF3107_07870;product=hypothetical protein;protein_id=OFT00589.1;transl_table=11 KV790816.1 Genbank gene 32269 32859 . - . ID=gene-HMPREF3107_07875;Name=HMPREF3107_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07875 KV790816.1 Protein Homology CDS 32269 32859 . - 0 ID=cds-OFT00590.1;Parent=gene-HMPREF3107_07875;Dbxref=NCBI_GP:OFT00590.1;Name=OFT00590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771676.1;locus_tag=HMPREF3107_07875;product=RNA polymerase subunit sigma-70;protein_id=OFT00590.1;transl_table=11 KV790816.1 Genbank gene 32856 33611 . - . ID=gene-HMPREF3107_07880;Name=HMPREF3107_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07880 KV790816.1 Protein Homology CDS 32856 33611 . - 0 ID=cds-OFT00591.1;Parent=gene-HMPREF3107_07880;Dbxref=NCBI_GP:OFT00591.1;Name=OFT00591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771678.1;locus_tag=HMPREF3107_07880;product=DUF2063 domain-containing protein;protein_id=OFT00591.1;transl_table=11 KV790816.1 Genbank gene 33592 34452 . - . ID=gene-HMPREF3107_07885;Name=HMPREF3107_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07885 KV790816.1 Protein Homology CDS 33592 34452 . - 0 ID=cds-OFT00592.1;Parent=gene-HMPREF3107_07885;Dbxref=NCBI_GP:OFT00592.1;Name=OFT00592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771682.1;locus_tag=HMPREF3107_07885;product=hypothetical protein;protein_id=OFT00592.1;transl_table=11 KV790816.1 Genbank gene 34569 34886 . - . ID=gene-HMPREF3107_07890;Name=HMPREF3107_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07890 KV790816.1 Protein Homology CDS 34569 34886 . - 0 ID=cds-OFT00593.1;Parent=gene-HMPREF3107_07890;Dbxref=NCBI_GP:OFT00593.1;Name=OFT00593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771686.1;locus_tag=HMPREF3107_07890;product=hypothetical protein;protein_id=OFT00593.1;transl_table=11 KV790816.1 Genbank gene 34995 35438 . - . ID=gene-HMPREF3107_07895;Name=HMPREF3107_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07895 KV790816.1 Protein Homology CDS 34995 35438 . - 0 ID=cds-OFT00594.1;Parent=gene-HMPREF3107_07895;Dbxref=NCBI_GP:OFT00594.1;Name=OFT00594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283719.1;locus_tag=HMPREF3107_07895;product=hypothetical protein;protein_id=OFT00594.1;transl_table=11 KV790816.1 Genbank gene 35653 35985 . - . ID=gene-HMPREF3107_07900;Name=HMPREF3107_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07900 KV790816.1 Protein Homology CDS 35653 35985 . - 0 ID=cds-OFT00595.1;Parent=gene-HMPREF3107_07900;Dbxref=NCBI_GP:OFT00595.1;Name=OFT00595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771691.1;locus_tag=HMPREF3107_07900;product=general secretion pathway protein GspG;protein_id=OFT00595.1;transl_table=11 KV790816.1 Genbank gene 36006 36863 . - . ID=gene-HMPREF3107_07905;Name=HMPREF3107_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07905 KV790816.1 Protein Homology CDS 36006 36863 . - 0 ID=cds-OFT00596.1;Parent=gene-HMPREF3107_07905;Dbxref=NCBI_GP:OFT00596.1;Name=OFT00596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286005.1;locus_tag=HMPREF3107_07905;product=segregation and condensation protein A;protein_id=OFT00596.1;transl_table=11 KV790816.1 Genbank gene 36951 37661 . - . ID=gene-HMPREF3107_07910;Name=HMPREF3107_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07910 KV790816.1 Protein Homology CDS 36951 37661 . - 0 ID=cds-OFT00597.1;Parent=gene-HMPREF3107_07910;Dbxref=NCBI_GP:OFT00597.1;Name=OFT00597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771696.1;locus_tag=HMPREF3107_07910;product=5'-methylthioadenosine phosphorylase;protein_id=OFT00597.1;transl_table=11 KV790816.1 Genbank gene 37804 39639 . + . ID=gene-HMPREF3107_07915;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF3107_07915 KV790816.1 Protein Homology CDS 37804 39639 . + 0 ID=cds-OFT00605.1;Parent=gene-HMPREF3107_07915;Dbxref=NCBI_GP:OFT00605.1;Name=OFT00605.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688152.1;locus_tag=HMPREF3107_07915;product=excinuclease ABC subunit C;protein_id=OFT00605.1;transl_table=11 KV790816.1 Genbank gene 39714 40139 . - . ID=gene-HMPREF3107_07920;Name=HMPREF3107_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07920 KV790816.1 Protein Homology CDS 39714 40139 . - 0 ID=cds-OFT00598.1;Parent=gene-HMPREF3107_07920;Dbxref=NCBI_GP:OFT00598.1;Name=OFT00598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778495.1;locus_tag=HMPREF3107_07920;product=hypothetical protein;protein_id=OFT00598.1;transl_table=11 KV790816.1 Genbank gene 40354 42042 . - . ID=gene-HMPREF3107_07925;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=HMPREF3107_07925 KV790816.1 Protein Homology CDS 40354 42042 . - 0 ID=cds-OFT00599.1;Parent=gene-HMPREF3107_07925;Dbxref=NCBI_GP:OFT00599.1;Name=OFT00599.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341535.1;locus_tag=HMPREF3107_07925;product=cation acetate symporter;protein_id=OFT00599.1;transl_table=11 KV790816.1 Genbank gene 42039 42359 . - . ID=gene-HMPREF3107_07930;Name=HMPREF3107_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07930 KV790816.1 Protein Homology CDS 42039 42359 . - 0 ID=cds-OFT00600.1;Parent=gene-HMPREF3107_07930;Dbxref=NCBI_GP:OFT00600.1;Name=OFT00600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781017.1;locus_tag=HMPREF3107_07930;product=hypothetical protein;protein_id=OFT00600.1;transl_table=11 ##sequence-region KV790817.1 1 5472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790817.1 Genbank region 1 5472 . + . ID=KV790817.1:1..5472;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790817.1 Genbank pseudogene 1 277 . + . ID=gene-HMPREF3107_07935;Name=HMPREF3107_07935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_07935;pseudo=true KV790817.1 Protein Homology CDS 1 277 . + 1 ID=cds-HMPREF3107_07935;Parent=gene-HMPREF3107_07935;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism%3B incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283836.1;locus_tag=HMPREF3107_07935;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;pseudo=true;transl_table=11 KV790817.1 Genbank gene 355 552 . + . ID=gene-HMPREF3107_07940;Name=HMPREF3107_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07940 KV790817.1 Protein Homology CDS 355 552 . + 0 ID=cds-OFT00555.1;Parent=gene-HMPREF3107_07940;Dbxref=NCBI_GP:OFT00555.1;Name=OFT00555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008314286.1;locus_tag=HMPREF3107_07940;product=hypothetical protein;protein_id=OFT00555.1;transl_table=11 KV790817.1 Genbank gene 590 1954 . + . ID=gene-HMPREF3107_07945;Name=HMPREF3107_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07945 KV790817.1 Protein Homology CDS 590 1954 . + 0 ID=cds-OFT00556.1;Parent=gene-HMPREF3107_07945;Dbxref=NCBI_GP:OFT00556.1;Name=OFT00556.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770004.1;locus_tag=HMPREF3107_07945;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=OFT00556.1;transl_table=11 KV790817.1 Genbank gene 2340 3452 . - . ID=gene-HMPREF3107_07950;Name=HMPREF3107_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07950 KV790817.1 Protein Homology CDS 2340 3452 . - 0 ID=cds-OFT00557.1;Parent=gene-HMPREF3107_07950;Dbxref=NCBI_GP:OFT00557.1;Name=OFT00557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770009.1;locus_tag=HMPREF3107_07950;product=methyltransferase;protein_id=OFT00557.1;transl_table=11 KV790817.1 Genbank gene 3549 4358 . - . ID=gene-HMPREF3107_07955;Name=HMPREF3107_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07955 KV790817.1 Protein Homology CDS 3549 4358 . - 0 ID=cds-OFT00558.1;Parent=gene-HMPREF3107_07955;Dbxref=NCBI_GP:OFT00558.1;Name=OFT00558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713191.1;locus_tag=HMPREF3107_07955;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=OFT00558.1;transl_table=11 KV790817.1 Genbank gene 4365 4736 . - . ID=gene-HMPREF3107_07960;Name=HMPREF3107_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07960 KV790817.1 Protein Homology CDS 4365 4736 . - 0 ID=cds-OFT00560.1;Parent=gene-HMPREF3107_07960;Dbxref=NCBI_GP:OFT00560.1;Name=OFT00560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770012.1;locus_tag=HMPREF3107_07960;product=outer membrane assembly protein BamE;protein_id=OFT00560.1;transl_table=11 KV790817.1 Genbank gene 4887 5315 . + . ID=gene-HMPREF3107_07965;Name=HMPREF3107_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07965 KV790817.1 Protein Homology CDS 4887 5315 . + 0 ID=cds-OFT00559.1;Parent=gene-HMPREF3107_07965;Dbxref=NCBI_GP:OFT00559.1;Name=OFT00559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283740.1;locus_tag=HMPREF3107_07965;product=transcriptional repressor;protein_id=OFT00559.1;transl_table=11 ##sequence-region KV790818.1 1 8326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790818.1 Genbank region 1 8326 . + . ID=KV790818.1:1..8326;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790818.1 Genbank pseudogene 1 268 . - . ID=gene-HMPREF3107_07970;Name=HMPREF3107_07970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_07970;pseudo=true KV790818.1 GeneMarkS+ CDS 1 268 . - 0 ID=cds-HMPREF3107_07970;Parent=gene-HMPREF3107_07970;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_07970;product=hypothetical protein;pseudo=true;transl_table=11 KV790818.1 Genbank gene 483 971 . + . ID=gene-HMPREF3107_07975;Name=HMPREF3107_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07975 KV790818.1 Protein Homology CDS 483 971 . + 0 ID=cds-OFT00521.1;Parent=gene-HMPREF3107_07975;Dbxref=NCBI_GP:OFT00521.1;Name=OFT00521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565750.1;locus_tag=HMPREF3107_07975;product=hypothetical protein;protein_id=OFT00521.1;transl_table=11 KV790818.1 Genbank gene 1021 1413 . - . ID=gene-HMPREF3107_07980;Name=HMPREF3107_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07980 KV790818.1 Protein Homology CDS 1021 1413 . - 0 ID=cds-OFT00522.1;Parent=gene-HMPREF3107_07980;Dbxref=NCBI_GP:OFT00522.1;Name=OFT00522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687068.1;locus_tag=HMPREF3107_07980;product=Cu(I)-responsive transcriptional regulator;protein_id=OFT00522.1;transl_table=11 KV790818.1 Genbank gene 1561 1770 . + . ID=gene-HMPREF3107_07985;Name=HMPREF3107_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07985 KV790818.1 Protein Homology CDS 1561 1770 . + 0 ID=cds-OFT00523.1;Parent=gene-HMPREF3107_07985;Dbxref=NCBI_GP:OFT00523.1;Name=OFT00523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674677.1;locus_tag=HMPREF3107_07985;product=hypothetical protein;protein_id=OFT00523.1;transl_table=11 KV790818.1 Genbank gene 1870 4032 . + . ID=gene-HMPREF3107_07990;Name=HMPREF3107_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_07990 KV790818.1 Protein Homology CDS 1870 4032 . + 0 ID=cds-OFT00524.1;Parent=gene-HMPREF3107_07990;Dbxref=NCBI_GP:OFT00524.1;Name=OFT00524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822391.1;locus_tag=HMPREF3107_07990;product=copper-transporting ATPase;protein_id=OFT00524.1;transl_table=11 KV790818.1 Genbank pseudogene 4108 4469 . + . ID=gene-HMPREF3107_07995;Name=HMPREF3107_07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_07995;pseudo=true KV790818.1 Protein Homology CDS 4108 4469 . + 0 ID=cds-HMPREF3107_07995;Parent=gene-HMPREF3107_07995;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822392.1;locus_tag=HMPREF3107_07995;product=hypothetical protein;pseudo=true;transl_table=11 KV790818.1 Genbank gene 4633 4881 . + . ID=gene-HMPREF3107_08000;Name=HMPREF3107_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08000 KV790818.1 Protein Homology CDS 4633 4881 . + 0 ID=cds-OFT00525.1;Parent=gene-HMPREF3107_08000;Dbxref=NCBI_GP:OFT00525.1;Name=OFT00525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312114.1;locus_tag=HMPREF3107_08000;product=CsbD-like protein;protein_id=OFT00525.1;transl_table=11 KV790818.1 Genbank gene 4966 5445 . - . ID=gene-HMPREF3107_08005;Name=HMPREF3107_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08005 KV790818.1 Protein Homology CDS 4966 5445 . - 0 ID=cds-OFT00526.1;Parent=gene-HMPREF3107_08005;Dbxref=NCBI_GP:OFT00526.1;Name=OFT00526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565744.1;locus_tag=HMPREF3107_08005;product=NemA protein;protein_id=OFT00526.1;transl_table=11 KV790818.1 Genbank gene 5567 6616 . - . ID=gene-HMPREF3107_08010;Name=HMPREF3107_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08010 KV790818.1 Protein Homology CDS 5567 6616 . - 0 ID=cds-OFT00527.1;Parent=gene-HMPREF3107_08010;Dbxref=NCBI_GP:OFT00527.1;Name=OFT00527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565743.1;locus_tag=HMPREF3107_08010;product=sulfate ABC transporter substrate-binding protein;protein_id=OFT00527.1;transl_table=11 KV790818.1 Genbank gene 6811 8190 . + . ID=gene-HMPREF3107_08015;Name=HMPREF3107_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08015 KV790818.1 Protein Homology CDS 6811 8190 . + 0 ID=cds-OFT00528.1;Parent=gene-HMPREF3107_08015;Dbxref=NCBI_GP:OFT00528.1;Name=OFT00528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565742.1;locus_tag=HMPREF3107_08015;product=hypothetical protein;protein_id=OFT00528.1;transl_table=11 ##sequence-region KV790819.1 1 6733 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790819.1 Genbank region 1 6733 . + . ID=KV790819.1:1..6733;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790819.1 Genbank gene 47 703 . - . ID=gene-HMPREF3107_08020;Name=HMPREF3107_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08020 KV790819.1 Protein Homology CDS 47 703 . - 0 ID=cds-OFT00505.1;Parent=gene-HMPREF3107_08020;Dbxref=NCBI_GP:OFT00505.1;Name=OFT00505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775582.1;locus_tag=HMPREF3107_08020;product=hydrolase;protein_id=OFT00505.1;transl_table=11 KV790819.1 Genbank gene 756 1760 . + . ID=gene-HMPREF3107_08025;Name=HMPREF3107_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08025 KV790819.1 Protein Homology CDS 756 1760 . + 0 ID=cds-OFT00506.1;Parent=gene-HMPREF3107_08025;Dbxref=NCBI_GP:OFT00506.1;Name=OFT00506.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216162.1;locus_tag=HMPREF3107_08025;product=ABC transporter substrate-binding protein;protein_id=OFT00506.1;transl_table=11 KV790819.1 Genbank gene 1835 2830 . + . ID=gene-HMPREF3107_08030;Name=HMPREF3107_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08030 KV790819.1 Protein Homology CDS 1835 2830 . + 0 ID=cds-OFT00507.1;Parent=gene-HMPREF3107_08030;Dbxref=NCBI_GP:OFT00507.1;Name=OFT00507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341435.1;locus_tag=HMPREF3107_08030;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=OFT00507.1;transl_table=11 KV790819.1 Genbank gene 3192 3512 . + . ID=gene-HMPREF3107_08035;Name=HMPREF3107_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08035 KV790819.1 GeneMarkS+ CDS 3192 3512 . + 0 ID=cds-OFT00508.1;Parent=gene-HMPREF3107_08035;Dbxref=NCBI_GP:OFT00508.1;Name=OFT00508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08035;product=hypothetical protein;protein_id=OFT00508.1;transl_table=11 KV790819.1 Genbank gene 3581 4171 . + . ID=gene-HMPREF3107_08040;Name=HMPREF3107_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08040 KV790819.1 GeneMarkS+ CDS 3581 4171 . + 0 ID=cds-OFT00509.1;Parent=gene-HMPREF3107_08040;Dbxref=NCBI_GP:OFT00509.1;Name=OFT00509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08040;product=hypothetical protein;protein_id=OFT00509.1;transl_table=11 KV790819.1 Genbank gene 4173 4517 . + . ID=gene-HMPREF3107_08045;Name=HMPREF3107_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08045 KV790819.1 GeneMarkS+ CDS 4173 4517 . + 0 ID=cds-OFT00510.1;Parent=gene-HMPREF3107_08045;Dbxref=NCBI_GP:OFT00510.1;Name=OFT00510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08045;product=hypothetical protein;protein_id=OFT00510.1;transl_table=11 KV790819.1 Genbank gene 4540 4782 . + . ID=gene-HMPREF3107_08050;Name=HMPREF3107_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08050 KV790819.1 GeneMarkS+ CDS 4540 4782 . + 0 ID=cds-OFT00511.1;Parent=gene-HMPREF3107_08050;Dbxref=NCBI_GP:OFT00511.1;Name=OFT00511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08050;product=hypothetical protein;protein_id=OFT00511.1;transl_table=11 KV790819.1 Genbank gene 4851 5261 . + . ID=gene-HMPREF3107_08055;Name=HMPREF3107_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08055 KV790819.1 GeneMarkS+ CDS 4851 5261 . + 0 ID=cds-OFT00512.1;Parent=gene-HMPREF3107_08055;Dbxref=NCBI_GP:OFT00512.1;Name=OFT00512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08055;product=hypothetical protein;protein_id=OFT00512.1;transl_table=11 KV790819.1 Genbank gene 5258 5800 . + . ID=gene-HMPREF3107_08060;Name=HMPREF3107_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08060 KV790819.1 Protein Homology CDS 5258 5800 . + 0 ID=cds-OFT00513.1;Parent=gene-HMPREF3107_08060;Dbxref=NCBI_GP:OFT00513.1;Name=OFT00513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005845588.1;locus_tag=HMPREF3107_08060;product=chromosome partitioning protein ParB;protein_id=OFT00513.1;transl_table=11 KV790819.1 Genbank gene 5797 6150 . + . ID=gene-HMPREF3107_08065;Name=HMPREF3107_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08065 KV790819.1 GeneMarkS+ CDS 5797 6150 . + 0 ID=cds-OFT00514.1;Parent=gene-HMPREF3107_08065;Dbxref=NCBI_GP:OFT00514.1;Name=OFT00514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08065;product=hypothetical protein;protein_id=OFT00514.1;transl_table=11 KV790819.1 Genbank gene 6143 6358 . + . ID=gene-HMPREF3107_08070;Name=HMPREF3107_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08070 KV790819.1 GeneMarkS+ CDS 6143 6358 . + 0 ID=cds-OFT00515.1;Parent=gene-HMPREF3107_08070;Dbxref=NCBI_GP:OFT00515.1;Name=OFT00515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08070;product=hypothetical protein;protein_id=OFT00515.1;transl_table=11 KV790819.1 Genbank pseudogene 6517 6712 . - . ID=gene-HMPREF3107_08075;Name=HMPREF3107_08075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08075;pseudo=true KV790819.1 Protein Homology CDS 6517 6712 . - 0 ID=cds-HMPREF3107_08075;Parent=gene-HMPREF3107_08075;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213582.1;locus_tag=HMPREF3107_08075;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV790820.1 1 14371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790820.1 Genbank region 1 14371 . + . ID=KV790820.1:1..14371;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790820.1 Genbank pseudogene 161 667 . + . ID=gene-HMPREF3107_08080;Name=HMPREF3107_08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08080;pseudo=true KV790820.1 Protein Homology CDS 161 667 . + 0 ID=cds-HMPREF3107_08080;Parent=gene-HMPREF3107_08080;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776340.1;locus_tag=HMPREF3107_08080;product=hypothetical protein;pseudo=true;transl_table=11 KV790820.1 Genbank gene 765 3284 . + . ID=gene-HMPREF3107_08085;Name=HMPREF3107_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08085 KV790820.1 Protein Homology CDS 765 3284 . + 0 ID=cds-OFT00421.1;Parent=gene-HMPREF3107_08085;Dbxref=NCBI_GP:OFT00421.1;Name=OFT00421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759256.1;locus_tag=HMPREF3107_08085;product=hypothetical protein;protein_id=OFT00421.1;transl_table=11 KV790820.1 Genbank gene 3553 4161 . + . ID=gene-HMPREF3107_08090;Name=HMPREF3107_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08090 KV790820.1 Protein Homology CDS 3553 4161 . + 0 ID=cds-OFT00422.1;Parent=gene-HMPREF3107_08090;Dbxref=NCBI_GP:OFT00422.1;Name=OFT00422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759263.1;locus_tag=HMPREF3107_08090;product=hypothetical protein;protein_id=OFT00422.1;transl_table=11 KV790820.1 Genbank gene 4274 4681 . + . ID=gene-HMPREF3107_08095;Name=HMPREF3107_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08095 KV790820.1 Protein Homology CDS 4274 4681 . + 0 ID=cds-OFT00423.1;Parent=gene-HMPREF3107_08095;Dbxref=NCBI_GP:OFT00423.1;Name=OFT00423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776332.1;locus_tag=HMPREF3107_08095;product=hypothetical protein;protein_id=OFT00423.1;transl_table=11 KV790820.1 Genbank gene 4774 5517 . - . ID=gene-HMPREF3107_08100;Name=HMPREF3107_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08100 KV790820.1 Protein Homology CDS 4774 5517 . - 0 ID=cds-OFT00424.1;Parent=gene-HMPREF3107_08100;Dbxref=NCBI_GP:OFT00424.1;Name=OFT00424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768424.1;locus_tag=HMPREF3107_08100;product=stage II sporulation protein E;protein_id=OFT00424.1;transl_table=11 KV790820.1 cmsearch binding_site 5742 5851 . + . ID=id-KV790820.1:5742..5851;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV790820.1 Genbank gene 5959 7053 . + . ID=gene-HMPREF3107_08105;Name=HMPREF3107_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08105 KV790820.1 Protein Homology CDS 5959 7053 . + 0 ID=cds-OFT00425.1;Parent=gene-HMPREF3107_08105;Dbxref=NCBI_GP:OFT00425.1;Name=OFT00425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677212.1;locus_tag=HMPREF3107_08105;product=cytochrome C biogenesis protein CcdA;protein_id=OFT00425.1;transl_table=11 KV790820.1 Genbank gene 7105 7563 . + . ID=gene-HMPREF3107_08110;Name=HMPREF3107_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08110 KV790820.1 Protein Homology CDS 7105 7563 . + 0 ID=cds-OFT00426.1;Parent=gene-HMPREF3107_08110;Dbxref=NCBI_GP:OFT00426.1;Name=OFT00426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677210.1;locus_tag=HMPREF3107_08110;product=isoprenylcysteine carboxyl methyltransferase;protein_id=OFT00426.1;transl_table=11 KV790820.1 Genbank gene 7706 8353 . + . ID=gene-HMPREF3107_08115;Name=HMPREF3107_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08115 KV790820.1 Protein Homology CDS 7706 8353 . + 0 ID=cds-OFT00427.1;Parent=gene-HMPREF3107_08115;Dbxref=NCBI_GP:OFT00427.1;Name=OFT00427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712943.1;locus_tag=HMPREF3107_08115;product=nuclease;protein_id=OFT00427.1;transl_table=11 KV790820.1 Genbank gene 8370 8987 . + . ID=gene-HMPREF3107_08120;Name=HMPREF3107_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08120 KV790820.1 Protein Homology CDS 8370 8987 . + 0 ID=cds-OFT00428.1;Parent=gene-HMPREF3107_08120;Dbxref=NCBI_GP:OFT00428.1;Name=OFT00428.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776318.1;locus_tag=HMPREF3107_08120;product=thiamine-phosphate diphosphorylase;protein_id=OFT00428.1;transl_table=11 KV790820.1 Genbank gene 9094 9288 . + . ID=gene-HMPREF3107_08125;Name=HMPREF3107_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08125 KV790820.1 Protein Homology CDS 9094 9288 . + 0 ID=cds-OFT00429.1;Parent=gene-HMPREF3107_08125;Dbxref=NCBI_GP:OFT00429.1;Name=OFT00429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273559.1;locus_tag=HMPREF3107_08125;product=thiamine biosynthesis protein ThiS;protein_id=OFT00429.1;transl_table=11 KV790820.1 Genbank gene 9502 10290 . + . ID=gene-HMPREF3107_08130;Name=HMPREF3107_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08130 KV790820.1 Protein Homology CDS 9502 10290 . + 0 ID=cds-OFT00430.1;Parent=gene-HMPREF3107_08130;Dbxref=NCBI_GP:OFT00430.1;Name=OFT00430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218200.1;locus_tag=HMPREF3107_08130;product=thiazole synthase;protein_id=OFT00430.1;transl_table=11 KV790820.1 Genbank gene 10369 11565 . - . ID=gene-HMPREF3107_08135;Name=HMPREF3107_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08135 KV790820.1 Protein Homology CDS 10369 11565 . - 0 ID=cds-OFT00431.1;Parent=gene-HMPREF3107_08135;Dbxref=NCBI_GP:OFT00431.1;Name=OFT00431.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769752.1;locus_tag=HMPREF3107_08135;product=aromatic amino acid aminotransferase;protein_id=OFT00431.1;transl_table=11 KV790820.1 Genbank gene 11948 12631 . + . ID=gene-HMPREF3107_08140;Name=HMPREF3107_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08140 KV790820.1 Protein Homology CDS 11948 12631 . + 0 ID=cds-OFT00435.1;Parent=gene-HMPREF3107_08140;Dbxref=NCBI_GP:OFT00435.1;Name=OFT00435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427576.1;locus_tag=HMPREF3107_08140;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=OFT00435.1;transl_table=11 KV790820.1 Genbank gene 12628 13071 . + . ID=gene-HMPREF3107_08145;Name=HMPREF3107_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08145 KV790820.1 Protein Homology CDS 12628 13071 . + 0 ID=cds-OFT00432.1;Parent=gene-HMPREF3107_08145;Dbxref=NCBI_GP:OFT00432.1;Name=OFT00432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518961.1;locus_tag=HMPREF3107_08145;product=ribosomal-protein-alanine N-acetyltransferase RimI;protein_id=OFT00432.1;transl_table=11 KV790820.1 Genbank gene 13065 13841 . + . ID=gene-HMPREF3107_08150;Name=HMPREF3107_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08150 KV790820.1 GeneMarkS+ CDS 13065 13841 . + 0 ID=cds-OFT00433.1;Parent=gene-HMPREF3107_08150;Dbxref=NCBI_GP:OFT00433.1;Name=OFT00433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08150;product=hypothetical protein;protein_id=OFT00433.1;transl_table=11 KV790820.1 Genbank gene 13976 14320 . + . ID=gene-HMPREF3107_08155;Name=HMPREF3107_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08155 KV790820.1 Protein Homology CDS 13976 14320 . + 0 ID=cds-OFT00434.1;Parent=gene-HMPREF3107_08155;Dbxref=NCBI_GP:OFT00434.1;Name=OFT00434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271734.1;locus_tag=HMPREF3107_08155;product=hypothetical protein;protein_id=OFT00434.1;transl_table=11 ##sequence-region KV790821.1 1 15372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790821.1 Genbank region 1 15372 . + . ID=KV790821.1:1..15372;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790821.1 Genbank gene 366 1592 . + . ID=gene-HMPREF3107_08160;Name=HMPREF3107_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08160 KV790821.1 Protein Homology CDS 366 1592 . + 0 ID=cds-OFT00377.1;Parent=gene-HMPREF3107_08160;Dbxref=NCBI_GP:OFT00377.1;Name=OFT00377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000279862.1;locus_tag=HMPREF3107_08160;product=integrase;protein_id=OFT00377.1;transl_table=11 KV790821.1 Genbank gene 1657 3357 . - . ID=gene-HMPREF3107_08165;Name=HMPREF3107_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08165 KV790821.1 Protein Homology CDS 1657 3357 . - 0 ID=cds-OFT00378.1;Parent=gene-HMPREF3107_08165;Dbxref=NCBI_GP:OFT00378.1;Name=OFT00378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222958.1;locus_tag=HMPREF3107_08165;product=hemin transporter;protein_id=OFT00378.1;transl_table=11 KV790821.1 Genbank gene 5157 6632 . - . ID=gene-HMPREF3107_08170;Name=HMPREF3107_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08170 KV790821.1 GeneMarkS+ CDS 5157 6632 . - 0 ID=cds-OFT00379.1;Parent=gene-HMPREF3107_08170;Dbxref=NCBI_GP:OFT00379.1;Name=OFT00379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08170;product=hypothetical protein;protein_id=OFT00379.1;transl_table=11 KV790821.1 Genbank pseudogene 7561 14820 . - . ID=gene-HMPREF3107_08175;Name=HMPREF3107_08175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08175;pseudo=true KV790821.1 Protein Homology CDS 7561 14820 . - 0 ID=cds-HMPREF3107_08175;Parent=gene-HMPREF3107_08175;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227067.1;locus_tag=HMPREF3107_08175;product=hemagglutinin;pseudo=true;transl_table=11 KV790821.1 Genbank pseudogene 15073 15349 . - . ID=gene-HMPREF3107_08180;Name=HMPREF3107_08180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08180;pseudo=true KV790821.1 Protein Homology CDS 15073 15349 . - 0 ID=cds-HMPREF3107_08180;Parent=gene-HMPREF3107_08180;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449042.1;locus_tag=HMPREF3107_08180;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region KV790822.1 1 78919 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790822.1 Genbank region 1 78919 . + . ID=KV790822.1:1..78919;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790822.1 Genbank gene 128 2233 . - . ID=gene-HMPREF3107_08185;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08185 KV790822.1 Protein Homology CDS 128 2233 . - 0 ID=cds-OFT00303.1;Parent=gene-HMPREF3107_08185;Dbxref=NCBI_GP:OFT00303.1;Name=OFT00303.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273262.1;locus_tag=HMPREF3107_08185;product=elongation factor G;protein_id=OFT00303.1;transl_table=11 KV790822.1 Genbank gene 2252 2722 . - . ID=gene-HMPREF3107_08190;Name=HMPREF3107_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08190 KV790822.1 Protein Homology CDS 2252 2722 . - 0 ID=cds-OFT00304.1;Parent=gene-HMPREF3107_08190;Dbxref=NCBI_GP:OFT00304.1;Name=OFT00304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=HMPREF3107_08190;product=30S ribosomal protein S7;protein_id=OFT00304.1;transl_table=11 KV790822.1 Genbank gene 2840 3211 . - . ID=gene-HMPREF3107_08195;Name=HMPREF3107_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08195 KV790822.1 Protein Homology CDS 2840 3211 . - 0 ID=cds-OFT00305.1;Parent=gene-HMPREF3107_08195;Dbxref=NCBI_GP:OFT00305.1;Name=OFT00305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5S1.1;locus_tag=HMPREF3107_08195;product=30S ribosomal protein S12;protein_id=OFT00305.1;transl_table=11 KV790822.1 Genbank gene 3409 4656 . - . ID=gene-HMPREF3107_08200;Name=HMPREF3107_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08200 KV790822.1 Protein Homology CDS 3409 4656 . - 0 ID=cds-OFT00306.1;Parent=gene-HMPREF3107_08200;Dbxref=NCBI_GP:OFT00306.1;Name=OFT00306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565793.1;locus_tag=HMPREF3107_08200;product=cell division protein FtsZ;protein_id=OFT00306.1;transl_table=11 KV790822.1 Genbank gene 4793 6040 . - . ID=gene-HMPREF3107_08205;Name=HMPREF3107_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08205 KV790822.1 Protein Homology CDS 4793 6040 . - 0 ID=cds-OFT00307.1;Parent=gene-HMPREF3107_08205;Dbxref=NCBI_GP:OFT00307.1;Name=OFT00307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283214.1;locus_tag=HMPREF3107_08205;product=cell division protein FtsA;protein_id=OFT00307.1;transl_table=11 KV790822.1 Genbank gene 6065 6814 . - . ID=gene-HMPREF3107_08210;Name=HMPREF3107_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08210 KV790822.1 Protein Homology CDS 6065 6814 . - 0 ID=cds-OFT00308.1;Parent=gene-HMPREF3107_08210;Dbxref=NCBI_GP:OFT00308.1;Name=OFT00308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283215.1;locus_tag=HMPREF3107_08210;product=cell division protein FtsQ;protein_id=OFT00308.1;transl_table=11 KV790822.1 Genbank gene 6804 7715 . - . ID=gene-HMPREF3107_08215;Name=HMPREF3107_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08215 KV790822.1 Protein Homology CDS 6804 7715 . - 0 ID=cds-OFT00313.1;Parent=gene-HMPREF3107_08215;Dbxref=NCBI_GP:OFT00313.1;Name=OFT00313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009424940.1;locus_tag=HMPREF3107_08215;product=D-alanine--D-alanine ligase;protein_id=OFT00313.1;transl_table=11 KV790822.1 Genbank gene 7839 9251 . - . ID=gene-HMPREF3107_08220;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF3107_08220 KV790822.1 Protein Homology CDS 7839 9251 . - 0 ID=cds-OFT00309.1;Parent=gene-HMPREF3107_08220;Dbxref=NCBI_GP:OFT00309.1;Name=OFT00309.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682492.1;locus_tag=HMPREF3107_08220;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=OFT00309.1;transl_table=11 KV790822.1 Genbank gene 9553 10626 . - . ID=gene-HMPREF3107_08225;Name=HMPREF3107_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08225 KV790822.1 Protein Homology CDS 9553 10626 . - 0 ID=cds-OFT00310.1;Parent=gene-HMPREF3107_08225;Dbxref=NCBI_GP:OFT00310.1;Name=OFT00310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565787.1;locus_tag=HMPREF3107_08225;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=OFT00310.1;transl_table=11 KV790822.1 Genbank gene 10630 11796 . - . ID=gene-HMPREF3107_08230;Name=HMPREF3107_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08230 KV790822.1 Protein Homology CDS 10630 11796 . - 0 ID=cds-OFT00311.1;Parent=gene-HMPREF3107_08230;Dbxref=NCBI_GP:OFT00311.1;Name=OFT00311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565786.1;locus_tag=HMPREF3107_08230;product=cell division protein FtsW;protein_id=OFT00311.1;transl_table=11 KV790822.1 Genbank gene 11825 13162 . - . ID=gene-HMPREF3107_08235;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF3107_08235 KV790822.1 Protein Homology CDS 11825 13162 . - 0 ID=cds-OFT00312.1;Parent=gene-HMPREF3107_08235;Dbxref=NCBI_GP:OFT00312.1;Name=OFT00312.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312754.1;locus_tag=HMPREF3107_08235;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=OFT00312.1;transl_table=11 KV790822.1 Genbank pseudogene 13248 13528 . - . ID=gene-HMPREF3107_08240;Name=HMPREF3107_08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08240;pseudo=true KV790822.1 Protein Homology CDS 13248 13528 . - 2 ID=cds-HMPREF3107_08240;Parent=gene-HMPREF3107_08240;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003700334.1;locus_tag=HMPREF3107_08240;product=hypothetical protein;pseudo=true;transl_table=11 KV790822.1 Genbank pseudogene 13549 13778 . - . ID=gene-HMPREF3107_08245;Name=HMPREF3107_08245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08245;pseudo=true KV790822.1 Protein Homology CDS 13549 13778 . - 0 ID=cds-HMPREF3107_08245;Parent=gene-HMPREF3107_08245;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220370.1;locus_tag=HMPREF3107_08245;product=hypothetical protein;pseudo=true;transl_table=11 KV790822.1 Genbank gene 13799 14243 . - . ID=gene-HMPREF3107_08250;Name=HMPREF3107_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08250;partial=true;start_range=.,13799 KV790822.1 Protein Homology CDS 13799 14243 . - 0 ID=cds-OFT00171.1;Parent=gene-HMPREF3107_08250;Dbxref=NCBI_GP:OFT00171.1;Name=OFT00171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220370.1;locus_tag=HMPREF3107_08250;partial=true;product=hypothetical protein;protein_id=OFT00171.1;start_range=.,13799;transl_table=11 KV790822.1 Genbank gene 14369 15451 . - . ID=gene-HMPREF3107_08255;Name=HMPREF3107_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08255 KV790822.1 Protein Homology CDS 14369 15451 . - 0 ID=cds-OFT00172.1;Parent=gene-HMPREF3107_08255;Dbxref=NCBI_GP:OFT00172.1;Name=OFT00172.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310927.1;locus_tag=HMPREF3107_08255;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=OFT00172.1;transl_table=11 KV790822.1 Genbank gene 15543 15968 . - . ID=gene-HMPREF3107_08260;Name=HMPREF3107_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08260 KV790822.1 GeneMarkS+ CDS 15543 15968 . - 0 ID=cds-OFT00173.1;Parent=gene-HMPREF3107_08260;Dbxref=NCBI_GP:OFT00173.1;Name=OFT00173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08260;product=hypothetical protein;protein_id=OFT00173.1;transl_table=11 KV790822.1 Genbank gene 16150 17517 . - . ID=gene-HMPREF3107_08265;Name=HMPREF3107_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08265 KV790822.1 Protein Homology CDS 16150 17517 . - 0 ID=cds-OFT00174.1;Parent=gene-HMPREF3107_08265;Dbxref=NCBI_GP:OFT00174.1;Name=OFT00174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681884.1;locus_tag=HMPREF3107_08265;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=OFT00174.1;transl_table=11 KV790822.1 Genbank gene 17557 18417 . - . ID=gene-HMPREF3107_08270;Name=HMPREF3107_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08270 KV790822.1 Protein Homology CDS 17557 18417 . - 0 ID=cds-OFT00175.1;Parent=gene-HMPREF3107_08270;Dbxref=NCBI_GP:OFT00175.1;Name=OFT00175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518892.1;locus_tag=HMPREF3107_08270;product=peptidase;protein_id=OFT00175.1;transl_table=11 KV790822.1 Genbank gene 18445 18966 . - . ID=gene-HMPREF3107_08275;Name=HMPREF3107_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08275 KV790822.1 Protein Homology CDS 18445 18966 . - 0 ID=cds-OFT00176.1;Parent=gene-HMPREF3107_08275;Dbxref=NCBI_GP:OFT00176.1;Name=OFT00176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271183.1;locus_tag=HMPREF3107_08275;product=peptidase M23;protein_id=OFT00176.1;transl_table=11 KV790822.1 Genbank gene 19097 20113 . - . ID=gene-HMPREF3107_08280;Name=HMPREF3107_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08280 KV790822.1 Protein Homology CDS 19097 20113 . - 0 ID=cds-OFT00202.1;Parent=gene-HMPREF3107_08280;Dbxref=NCBI_GP:OFT00202.1;Name=OFT00202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687208.1;locus_tag=HMPREF3107_08280;product=hypothetical protein;protein_id=OFT00202.1;transl_table=11 KV790822.1 Genbank gene 20212 21690 . - . ID=gene-HMPREF3107_08285;Name=HMPREF3107_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08285 KV790822.1 Protein Homology CDS 20212 21690 . - 0 ID=cds-OFT00177.1;Parent=gene-HMPREF3107_08285;Dbxref=NCBI_GP:OFT00177.1;Name=OFT00177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743295.1;locus_tag=HMPREF3107_08285;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=OFT00177.1;transl_table=11 KV790822.1 Genbank gene 21721 23718 . - . ID=gene-HMPREF3107_08290;Name=HMPREF3107_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08290 KV790822.1 Protein Homology CDS 21721 23718 . - 0 ID=cds-OFT00178.1;Parent=gene-HMPREF3107_08290;Dbxref=NCBI_GP:OFT00178.1;Name=OFT00178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774036.1;locus_tag=HMPREF3107_08290;product=penicillin-binding protein;protein_id=OFT00178.1;transl_table=11 KV790822.1 Genbank gene 23740 24000 . - . ID=gene-HMPREF3107_08295;Name=HMPREF3107_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08295 KV790822.1 Protein Homology CDS 23740 24000 . - 0 ID=cds-OFT00179.1;Parent=gene-HMPREF3107_08295;Dbxref=NCBI_GP:OFT00179.1;Name=OFT00179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774035.1;locus_tag=HMPREF3107_08295;product=cell division protein FtsL;protein_id=OFT00179.1;transl_table=11 KV790822.1 Genbank gene 24016 24984 . - . ID=gene-HMPREF3107_08300;Name=HMPREF3107_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08300 KV790822.1 Protein Homology CDS 24016 24984 . - 0 ID=cds-OFT00180.1;Parent=gene-HMPREF3107_08300;Dbxref=NCBI_GP:OFT00180.1;Name=OFT00180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115448.1;locus_tag=HMPREF3107_08300;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=OFT00180.1;transl_table=11 KV790822.1 Genbank gene 24981 25436 . - . ID=gene-HMPREF3107_08305;Name=HMPREF3107_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08305 KV790822.1 Protein Homology CDS 24981 25436 . - 0 ID=cds-OFT00181.1;Parent=gene-HMPREF3107_08305;Dbxref=NCBI_GP:OFT00181.1;Name=OFT00181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774032.1;locus_tag=HMPREF3107_08305;product=cell division/cell wall cluster transcriptional repressor MraZ;protein_id=OFT00181.1;transl_table=11 KV790822.1 Genbank gene 25759 26913 . + . ID=gene-HMPREF3107_08310;Name=HMPREF3107_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08310 KV790822.1 Protein Homology CDS 25759 26913 . + 0 ID=cds-OFT00182.1;Parent=gene-HMPREF3107_08310;Dbxref=NCBI_GP:OFT00182.1;Name=OFT00182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341895.1;locus_tag=HMPREF3107_08310;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=OFT00182.1;transl_table=11 KV790822.1 Genbank gene 27011 27087 . + . ID=gene-HMPREF3107_08315;Name=HMPREF3107_08315;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_08315 KV790822.1 tRNAscan-SE tRNA 27011 27087 . + . ID=rna-HMPREF3107_08315;Parent=gene-HMPREF3107_08315;anticodon=(pos:27045..27047);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08315;product=tRNA-Met KV790822.1 tRNAscan-SE exon 27011 27087 . + . ID=exon-HMPREF3107_08315-1;Parent=rna-HMPREF3107_08315;anticodon=(pos:27045..27047);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08315;product=tRNA-Met KV790822.1 Genbank gene 27094 27169 . + . ID=gene-HMPREF3107_08320;Name=HMPREF3107_08320;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_08320 KV790822.1 tRNAscan-SE tRNA 27094 27169 . + . ID=rna-HMPREF3107_08320;Parent=gene-HMPREF3107_08320;anticodon=(pos:27127..27129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08320;product=tRNA-Ala KV790822.1 tRNAscan-SE exon 27094 27169 . + . ID=exon-HMPREF3107_08320-1;Parent=rna-HMPREF3107_08320;anticodon=(pos:27127..27129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08320;product=tRNA-Ala KV790822.1 Genbank gene 27307 28143 . + . ID=gene-HMPREF3107_08325;Name=HMPREF3107_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08325 KV790822.1 Protein Homology CDS 27307 28143 . + 0 ID=cds-OFT00183.1;Parent=gene-HMPREF3107_08325;Dbxref=NCBI_GP:OFT00183.1;Name=OFT00183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774030.1;locus_tag=HMPREF3107_08325;product=alpha/beta hydrolase;protein_id=OFT00183.1;transl_table=11 KV790822.1 Genbank gene 28186 29688 . - . ID=gene-HMPREF3107_08330;Name=HMPREF3107_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08330 KV790822.1 Protein Homology CDS 28186 29688 . - 0 ID=cds-OFT00184.1;Parent=gene-HMPREF3107_08330;Dbxref=NCBI_GP:OFT00184.1;Name=OFT00184.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774028.1;locus_tag=HMPREF3107_08330;product=ATP-dependent protease;protein_id=OFT00184.1;transl_table=11 KV790822.1 Genbank gene 29919 30692 . + . ID=gene-HMPREF3107_08335;Name=HMPREF3107_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08335 KV790822.1 Protein Homology CDS 29919 30692 . + 0 ID=cds-OFT00185.1;Parent=gene-HMPREF3107_08335;Dbxref=NCBI_GP:OFT00185.1;Name=OFT00185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774027.1;locus_tag=HMPREF3107_08335;product=cell division protein FtsN;protein_id=OFT00185.1;transl_table=11 KV790822.1 Genbank gene 30719 31417 . + . ID=gene-HMPREF3107_08340;Name=HMPREF3107_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08340 KV790822.1 Protein Homology CDS 30719 31417 . + 0 ID=cds-OFT00186.1;Parent=gene-HMPREF3107_08340;Dbxref=NCBI_GP:OFT00186.1;Name=OFT00186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283519.1;locus_tag=HMPREF3107_08340;product=disulfide bond formation protein DsbA;protein_id=OFT00186.1;transl_table=11 KV790822.1 Genbank gene 31663 32355 . - . ID=gene-HMPREF3107_08345;Name=HMPREF3107_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08345 KV790822.1 GeneMarkS+ CDS 31663 32355 . - 0 ID=cds-OFT00187.1;Parent=gene-HMPREF3107_08345;Dbxref=NCBI_GP:OFT00187.1;Name=OFT00187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08345;product=hypothetical protein;protein_id=OFT00187.1;transl_table=11 KV790822.1 Genbank gene 32588 33811 . + . ID=gene-HMPREF3107_08350;Name=HMPREF3107_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08350 KV790822.1 Protein Homology CDS 32588 33811 . + 0 ID=cds-OFT00203.1;Parent=gene-HMPREF3107_08350;Dbxref=NCBI_GP:OFT00203.1;Name=OFT00203.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%2C in Bacillus%2C lysine sensitive%3B regulated by response to starvation.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427353.1;locus_tag=HMPREF3107_08350;product=aspartate kinase;protein_id=OFT00203.1;transl_table=11 KV790822.1 Genbank gene 33891 34319 . - . ID=gene-HMPREF3107_08355;Name=HMPREF3107_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08355 KV790822.1 Protein Homology CDS 33891 34319 . - 0 ID=cds-OFT00188.1;Parent=gene-HMPREF3107_08355;Dbxref=NCBI_GP:OFT00188.1;Name=OFT00188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014992182.1;locus_tag=HMPREF3107_08355;product=hypothetical protein;protein_id=OFT00188.1;transl_table=11 KV790822.1 Genbank gene 34359 34865 . - . ID=gene-HMPREF3107_08360;Name=HMPREF3107_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08360 KV790822.1 Protein Homology CDS 34359 34865 . - 0 ID=cds-OFT00204.1;Parent=gene-HMPREF3107_08360;Dbxref=NCBI_GP:OFT00204.1;Name=OFT00204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270424.1;locus_tag=HMPREF3107_08360;product=thiol reductase thioredoxin;protein_id=OFT00204.1;transl_table=11 KV790822.1 Genbank gene 35003 36487 . - . ID=gene-HMPREF3107_08365;Name=HMPREF3107_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08365 KV790822.1 Protein Homology CDS 35003 36487 . - 0 ID=cds-OFT00189.1;Parent=gene-HMPREF3107_08365;Dbxref=NCBI_GP:OFT00189.1;Name=OFT00189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774020.1;locus_tag=HMPREF3107_08365;product=patatin;protein_id=OFT00189.1;transl_table=11 KV790822.1 Genbank gene 36575 37087 . + . ID=gene-HMPREF3107_08370;Name=HMPREF3107_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08370 KV790822.1 GeneMarkS+ CDS 36575 37087 . + 0 ID=cds-OFT00190.1;Parent=gene-HMPREF3107_08370;Dbxref=NCBI_GP:OFT00190.1;Name=OFT00190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08370;product=hypothetical protein;protein_id=OFT00190.1;transl_table=11 KV790822.1 Genbank gene 37246 37602 . + . ID=gene-HMPREF3107_08375;Name=HMPREF3107_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08375 KV790822.1 Protein Homology CDS 37246 37602 . + 0 ID=cds-OFT00191.1;Parent=gene-HMPREF3107_08375;Dbxref=NCBI_GP:OFT00191.1;Name=OFT00191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774007.1;locus_tag=HMPREF3107_08375;product=dienelactone hydrolase;protein_id=OFT00191.1;transl_table=11 KV790822.1 Genbank gene 38059 39168 . - . ID=gene-HMPREF3107_08380;Name=HMPREF3107_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08380 KV790822.1 Protein Homology CDS 38059 39168 . - 0 ID=cds-OFT00192.1;Parent=gene-HMPREF3107_08380;Dbxref=NCBI_GP:OFT00192.1;Name=OFT00192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227047.1;locus_tag=HMPREF3107_08380;product=addiction module protein;protein_id=OFT00192.1;transl_table=11 KV790822.1 Genbank gene 39171 40211 . - . ID=gene-HMPREF3107_08385;Name=HMPREF3107_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08385 KV790822.1 GeneMarkS+ CDS 39171 40211 . - 0 ID=cds-OFT00193.1;Parent=gene-HMPREF3107_08385;Dbxref=NCBI_GP:OFT00193.1;Name=OFT00193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08385;product=integrase;protein_id=OFT00193.1;transl_table=11 KV790822.1 Genbank gene 40432 40516 . - . ID=gene-HMPREF3107_08390;Name=HMPREF3107_08390;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_08390 KV790822.1 tRNAscan-SE tRNA 40432 40516 . - . ID=rna-HMPREF3107_08390;Parent=gene-HMPREF3107_08390;anticodon=(pos:complement(40480..40482));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08390;product=tRNA-Leu KV790822.1 tRNAscan-SE exon 40432 40516 . - . ID=exon-HMPREF3107_08390-1;Parent=rna-HMPREF3107_08390;anticodon=(pos:complement(40480..40482));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08390;product=tRNA-Leu KV790822.1 Genbank gene 40739 41425 . + . ID=gene-HMPREF3107_08395;Name=HMPREF3107_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08395 KV790822.1 Protein Homology CDS 40739 41425 . + 0 ID=cds-OFT00194.1;Parent=gene-HMPREF3107_08395;Dbxref=NCBI_GP:OFT00194.1;Name=OFT00194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774006.1;locus_tag=HMPREF3107_08395;product=ahpC/TSA family protein;protein_id=OFT00194.1;transl_table=11 KV790822.1 Genbank gene 41510 42160 . + . ID=gene-HMPREF3107_08400;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=HMPREF3107_08400 KV790822.1 Protein Homology CDS 41510 42160 . + 0 ID=cds-OFT00195.1;Parent=gene-HMPREF3107_08400;Dbxref=NCBI_GP:OFT00195.1;Name=OFT00195.1;Note=short form of enzyme%3B requires HisZ for function%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms heteromultimer of HisG and HisZ;gbkey=CDS;gene=hisG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285044.1;locus_tag=HMPREF3107_08400;product=ATP phosphoribosyltransferase;protein_id=OFT00195.1;transl_table=11 KV790822.1 Genbank gene 42201 42905 . + . ID=gene-HMPREF3107_08405;Name=HMPREF3107_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08405 KV790822.1 GeneMarkS+ CDS 42201 42905 . + 0 ID=cds-OFT00196.1;Parent=gene-HMPREF3107_08405;Dbxref=NCBI_GP:OFT00196.1;Name=OFT00196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08405;product=hypothetical protein;protein_id=OFT00196.1;transl_table=11 KV790822.1 Genbank gene 42999 44162 . + . ID=gene-HMPREF3107_08410;Name=HMPREF3107_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08410 KV790822.1 Protein Homology CDS 42999 44162 . + 0 ID=cds-OFT00197.1;Parent=gene-HMPREF3107_08410;Dbxref=NCBI_GP:OFT00197.1;Name=OFT00197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774000.1;locus_tag=HMPREF3107_08410;product=NnrS protein;protein_id=OFT00197.1;transl_table=11 KV790822.1 Genbank gene 44383 45573 . - . ID=gene-HMPREF3107_08415;Name=HMPREF3107_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08415 KV790822.1 Protein Homology CDS 44383 45573 . - 0 ID=cds-OFT00205.1;Parent=gene-HMPREF3107_08415;Dbxref=NCBI_GP:OFT00205.1;Name=OFT00205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752738.1;locus_tag=HMPREF3107_08415;product=succinyldiaminopimelate transaminase;protein_id=OFT00205.1;transl_table=11 KV790822.1 Genbank gene 45672 45875 . - . ID=gene-HMPREF3107_08420;Name=HMPREF3107_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08420 KV790822.1 Protein Homology CDS 45672 45875 . - 0 ID=cds-OFT00198.1;Parent=gene-HMPREF3107_08420;Dbxref=NCBI_GP:OFT00198.1;Name=OFT00198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427369.1;locus_tag=HMPREF3107_08420;product=hypothetical protein;protein_id=OFT00198.1;transl_table=11 KV790822.1 Genbank gene 46319 47866 . + . ID=gene-HMPREF3107_08425;Name=HMPREF3107_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08425 KV790822.1 Protein Homology CDS 46319 47866 . + 0 ID=cds-OFT00206.1;Parent=gene-HMPREF3107_08425;Dbxref=NCBI_GP:OFT00206.1;Name=OFT00206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343507.1;locus_tag=HMPREF3107_08425;product=apolipoprotein N-acyltransferase;protein_id=OFT00206.1;transl_table=11 KV790822.1 Genbank gene 48603 49703 . - . ID=gene-HMPREF3107_08430;Name=HMPREF3107_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08430 KV790822.1 Protein Homology CDS 48603 49703 . - 0 ID=cds-OFT00199.1;Parent=gene-HMPREF3107_08430;Dbxref=NCBI_GP:OFT00199.1;Name=OFT00199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773976.1;locus_tag=HMPREF3107_08430;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=OFT00199.1;transl_table=11 KV790822.1 Genbank gene 49994 50425 . + . ID=gene-HMPREF3107_08435;Name=HMPREF3107_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08435 KV790822.1 Protein Homology CDS 49994 50425 . + 0 ID=cds-OFT00207.1;Parent=gene-HMPREF3107_08435;Dbxref=NCBI_GP:OFT00207.1;Name=OFT00207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685973.1;locus_tag=HMPREF3107_08435;product=ribosome maturation factor RimP;protein_id=OFT00207.1;transl_table=11 KV790822.1 Genbank gene 50464 51966 . + . ID=gene-HMPREF3107_08440;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08440 KV790822.1 Protein Homology CDS 50464 51966 . + 0 ID=cds-OFT00200.1;Parent=gene-HMPREF3107_08440;Dbxref=NCBI_GP:OFT00200.1;Name=OFT00200.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116078.1;locus_tag=HMPREF3107_08440;product=transcription termination/antitermination protein NusA;protein_id=OFT00200.1;transl_table=11 KV790822.1 Genbank gene 51981 54749 . + . ID=gene-HMPREF3107_08445;Name=HMPREF3107_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08445 KV790822.1 Protein Homology CDS 51981 54749 . + 0 ID=cds-OFT00201.1;Parent=gene-HMPREF3107_08445;Dbxref=NCBI_GP:OFT00201.1;Name=OFT00201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575495.1;locus_tag=HMPREF3107_08445;product=translation initiation factor IF-2;protein_id=OFT00201.1;transl_table=11 KV790822.1 Genbank gene 54949 55689 . - . ID=gene-HMPREF3107_08450;Name=HMPREF3107_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08450 KV790822.1 Protein Homology CDS 54949 55689 . - 0 ID=cds-OFT00036.1;Parent=gene-HMPREF3107_08450;Dbxref=NCBI_GP:OFT00036.1;Name=OFT00036.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117546.1;locus_tag=HMPREF3107_08450;product=twin-arginine protein translocation system subunit TatC;protein_id=OFT00036.1;transl_table=11 KV790822.1 Genbank gene 55833 56336 . - . ID=gene-HMPREF3107_08455;Name=HMPREF3107_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08455 KV790822.1 Protein Homology CDS 55833 56336 . - 0 ID=cds-OFT00037.1;Parent=gene-HMPREF3107_08455;Dbxref=NCBI_GP:OFT00037.1;Name=OFT00037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773963.1;locus_tag=HMPREF3107_08455;product=twin arginine-targeting protein translocase TatB;protein_id=OFT00037.1;transl_table=11 KV790822.1 Genbank gene 56340 56546 . - . ID=gene-HMPREF3107_08460;Name=HMPREF3107_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08460 KV790822.1 Protein Homology CDS 56340 56546 . - 0 ID=cds-OFT00038.1;Parent=gene-HMPREF3107_08460;Dbxref=NCBI_GP:OFT00038.1;Name=OFT00038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710477.1;locus_tag=HMPREF3107_08460;product=preprotein translocase subunit TatA;protein_id=OFT00038.1;transl_table=11 KV790822.1 Genbank gene 56607 56930 . - . ID=gene-HMPREF3107_08465;Name=HMPREF3107_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08465 KV790822.1 Protein Homology CDS 56607 56930 . - 0 ID=cds-OFT00062.1;Parent=gene-HMPREF3107_08465;Dbxref=NCBI_GP:OFT00062.1;Name=OFT00062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283857.1;locus_tag=HMPREF3107_08465;product=histidine triad nucleotide-binding protein;protein_id=OFT00062.1;transl_table=11 KV790822.1 Genbank gene 57032 57355 . - . ID=gene-HMPREF3107_08470;Name=HMPREF3107_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08470 KV790822.1 Protein Homology CDS 57032 57355 . - 0 ID=cds-OFT00039.1;Parent=gene-HMPREF3107_08470;Dbxref=NCBI_GP:OFT00039.1;Name=OFT00039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313162.1;locus_tag=HMPREF3107_08470;product=phosphoribosyl-ATP pyrophosphatase;protein_id=OFT00039.1;transl_table=11 KV790822.1 Genbank gene 57431 57829 . - . ID=gene-HMPREF3107_08475;Name=HMPREF3107_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08475 KV790822.1 Protein Homology CDS 57431 57829 . - 0 ID=cds-OFT00040.1;Parent=gene-HMPREF3107_08475;Dbxref=NCBI_GP:OFT00040.1;Name=OFT00040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776868.1;locus_tag=HMPREF3107_08475;product=phosphoribosyl-AMP cyclohydrolase;protein_id=OFT00040.1;transl_table=11 KV790822.1 Genbank gene 57870 58421 . - . ID=gene-HMPREF3107_08480;Name=HMPREF3107_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08480 KV790822.1 Protein Homology CDS 57870 58421 . - 0 ID=cds-OFT00041.1;Parent=gene-HMPREF3107_08480;Dbxref=NCBI_GP:OFT00041.1;Name=OFT00041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773953.1;locus_tag=HMPREF3107_08480;product=hypothetical protein;protein_id=OFT00041.1;transl_table=11 KV790822.1 Genbank gene 58605 58886 . + . ID=gene-HMPREF3107_08485;Name=HMPREF3107_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08485 KV790822.1 GeneMarkS+ CDS 58605 58886 . + 0 ID=cds-OFT00042.1;Parent=gene-HMPREF3107_08485;Dbxref=NCBI_GP:OFT00042.1;Name=OFT00042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08485;product=hypothetical protein;protein_id=OFT00042.1;transl_table=11 KV790822.1 Genbank gene 59146 59967 . - . ID=gene-HMPREF3107_08490;Name=HMPREF3107_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08490 KV790822.1 Protein Homology CDS 59146 59967 . - 0 ID=cds-OFT00043.1;Parent=gene-HMPREF3107_08490;Dbxref=NCBI_GP:OFT00043.1;Name=OFT00043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341216.1;locus_tag=HMPREF3107_08490;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=OFT00043.1;transl_table=11 KV790822.1 Genbank gene 60066 61262 . - . ID=gene-HMPREF3107_08495;Name=HMPREF3107_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08495 KV790822.1 Protein Homology CDS 60066 61262 . - 0 ID=cds-OFT00044.1;Parent=gene-HMPREF3107_08495;Dbxref=NCBI_GP:OFT00044.1;Name=OFT00044.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773949.1;locus_tag=HMPREF3107_08495;product=acetate kinase;protein_id=OFT00044.1;transl_table=11 KV790822.1 Genbank gene 61474 62049 . - . ID=gene-HMPREF3107_08500;Name=HMPREF3107_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08500 KV790822.1 GeneMarkS+ CDS 61474 62049 . - 0 ID=cds-OFT00045.1;Parent=gene-HMPREF3107_08500;Dbxref=NCBI_GP:OFT00045.1;Name=OFT00045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08500;product=hypothetical protein;protein_id=OFT00045.1;transl_table=11 KV790822.1 Genbank gene 62155 63084 . - . ID=gene-HMPREF3107_08505;Name=HMPREF3107_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08505 KV790822.1 Protein Homology CDS 62155 63084 . - 0 ID=cds-OFT00046.1;Parent=gene-HMPREF3107_08505;Dbxref=NCBI_GP:OFT00046.1;Name=OFT00046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773945.1;locus_tag=HMPREF3107_08505;product=malonyl CoA-acyl carrier protein transacylase;protein_id=OFT00046.1;transl_table=11 KV790822.1 Genbank gene 63324 63899 . - . ID=gene-HMPREF3107_08510;Name=HMPREF3107_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08510 KV790822.1 Protein Homology CDS 63324 63899 . - 0 ID=cds-OFT00047.1;Parent=gene-HMPREF3107_08510;Dbxref=NCBI_GP:OFT00047.1;Name=OFT00047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773941.1;locus_tag=HMPREF3107_08510;product=hypothetical protein;protein_id=OFT00047.1;transl_table=11 KV790822.1 Genbank gene 63953 64912 . - . ID=gene-HMPREF3107_08515;Name=HMPREF3107_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08515 KV790822.1 Protein Homology CDS 63953 64912 . - 0 ID=cds-OFT00048.1;Parent=gene-HMPREF3107_08515;Dbxref=NCBI_GP:OFT00048.1;Name=OFT00048.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773939.1;locus_tag=HMPREF3107_08515;product=3-oxoacyl-ACP synthase;protein_id=OFT00048.1;transl_table=11 KV790822.1 Genbank gene 65071 66129 . - . ID=gene-HMPREF3107_08520;Name=HMPREF3107_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08520 KV790822.1 Protein Homology CDS 65071 66129 . - 0 ID=cds-OFT00049.1;Parent=gene-HMPREF3107_08520;Dbxref=NCBI_GP:OFT00049.1;Name=OFT00049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283535.1;locus_tag=HMPREF3107_08520;product=phosphate acyltransferase;protein_id=OFT00049.1;transl_table=11 KV790822.1 Genbank gene 66243 66776 . - . ID=gene-HMPREF3107_08525;Name=HMPREF3107_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08525 KV790822.1 Protein Homology CDS 66243 66776 . - 0 ID=cds-OFT00050.1;Parent=gene-HMPREF3107_08525;Dbxref=NCBI_GP:OFT00050.1;Name=OFT00050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783069.1;locus_tag=HMPREF3107_08525;product=phosphoribosyltransferase;protein_id=OFT00050.1;transl_table=11 KV790822.1 Genbank gene 66854 67033 . - . ID=gene-HMPREF3107_08530;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF3107_08530 KV790822.1 Protein Homology CDS 66854 67033 . - 0 ID=cds-OFT00051.1;Parent=gene-HMPREF3107_08530;Dbxref=NCBI_GP:OFT00051.1;Name=OFT00051.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642843.1;locus_tag=HMPREF3107_08530;product=50S ribosomal protein L32;protein_id=OFT00051.1;transl_table=11 KV790822.1 Genbank gene 67063 67566 . - . ID=gene-HMPREF3107_08535;Name=HMPREF3107_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08535 KV790822.1 Protein Homology CDS 67063 67566 . - 0 ID=cds-OFT00052.1;Parent=gene-HMPREF3107_08535;Dbxref=NCBI_GP:OFT00052.1;Name=OFT00052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773929.1;locus_tag=HMPREF3107_08535;product=hypothetical protein;protein_id=OFT00052.1;transl_table=11 KV790822.1 Genbank gene 67619 68209 . + . ID=gene-HMPREF3107_08540;Name=HMPREF3107_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08540 KV790822.1 Protein Homology CDS 67619 68209 . + 0 ID=cds-OFT00063.1;Parent=gene-HMPREF3107_08540;Dbxref=NCBI_GP:OFT00063.1;Name=OFT00063.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764642.1;locus_tag=HMPREF3107_08540;product=septum formation inhibitor Maf;protein_id=OFT00063.1;transl_table=11 KV790822.1 Genbank gene 68260 68967 . + . ID=gene-HMPREF3107_08545;Name=HMPREF3107_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08545 KV790822.1 Protein Homology CDS 68260 68967 . + 0 ID=cds-OFT00053.1;Parent=gene-HMPREF3107_08545;Dbxref=NCBI_GP:OFT00053.1;Name=OFT00053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283530.1;locus_tag=HMPREF3107_08545;product=tetrapyrrole methylase;protein_id=OFT00053.1;transl_table=11 KV790822.1 Genbank gene 69020 69096 . + . ID=gene-HMPREF3107_08550;Name=HMPREF3107_08550;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_08550 KV790822.1 tRNAscan-SE tRNA 69020 69096 . + . ID=rna-HMPREF3107_08550;Parent=gene-HMPREF3107_08550;anticodon=(pos:69054..69056);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08550;product=tRNA-Pro KV790822.1 tRNAscan-SE exon 69020 69096 . + . ID=exon-HMPREF3107_08550-1;Parent=rna-HMPREF3107_08550;anticodon=(pos:69054..69056);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08550;product=tRNA-Pro KV790822.1 Genbank gene 69310 70437 . - . ID=gene-HMPREF3107_08555;Name=HMPREF3107_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08555 KV790822.1 Protein Homology CDS 69310 70437 . - 0 ID=cds-OFT00054.1;Parent=gene-HMPREF3107_08555;Dbxref=NCBI_GP:OFT00054.1;Name=OFT00054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769958.1;locus_tag=HMPREF3107_08555;product=carbamoyl-phosphate synthase small subunit;protein_id=OFT00054.1;transl_table=11 KV790822.1 Genbank gene 70689 71051 . - . ID=gene-HMPREF3107_08560;Name=HMPREF3107_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08560 KV790822.1 Protein Homology CDS 70689 71051 . - 0 ID=cds-OFT00055.1;Parent=gene-HMPREF3107_08560;Dbxref=NCBI_GP:OFT00055.1;Name=OFT00055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769955.1;locus_tag=HMPREF3107_08560;product=hypothetical protein;protein_id=OFT00055.1;transl_table=11 KV790822.1 Genbank gene 71176 71811 . - . ID=gene-HMPREF3107_08565;Name=HMPREF3107_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08565 KV790822.1 Protein Homology CDS 71176 71811 . - 0 ID=cds-OFT00056.1;Parent=gene-HMPREF3107_08565;Dbxref=NCBI_GP:OFT00056.1;Name=OFT00056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232884.1;locus_tag=HMPREF3107_08565;product=peptidase M23;protein_id=OFT00056.1;transl_table=11 KV790822.1 Genbank gene 71813 72349 . - . ID=gene-HMPREF3107_08570;Name=HMPREF3107_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08570 KV790822.1 Protein Homology CDS 71813 72349 . - 0 ID=cds-OFT00057.1;Parent=gene-HMPREF3107_08570;Dbxref=NCBI_GP:OFT00057.1;Name=OFT00057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426309.1;locus_tag=HMPREF3107_08570;product=GTP-binding protein;protein_id=OFT00057.1;transl_table=11 KV790822.1 Genbank gene 72362 73471 . - . ID=gene-HMPREF3107_08575;Name=HMPREF3107_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08575 KV790822.1 Protein Homology CDS 72362 73471 . - 0 ID=cds-OFT00058.1;Parent=gene-HMPREF3107_08575;Dbxref=NCBI_GP:OFT00058.1;Name=OFT00058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686785.1;locus_tag=HMPREF3107_08575;product=alpha-glucan phosphorylase;protein_id=OFT00058.1;transl_table=11 KV790822.1 Genbank gene 73486 74889 . - . ID=gene-HMPREF3107_08580;Name=HMPREF3107_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08580 KV790822.1 Protein Homology CDS 73486 74889 . - 0 ID=cds-OFT00064.1;Parent=gene-HMPREF3107_08580;Dbxref=NCBI_GP:OFT00064.1;Name=OFT00064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174900.1;locus_tag=HMPREF3107_08580;product=23S rRNA methyltransferase;protein_id=OFT00064.1;transl_table=11 KV790822.1 Genbank gene 75110 76447 . - . ID=gene-HMPREF3107_08585;Name=HMPREF3107_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08585 KV790822.1 Protein Homology CDS 75110 76447 . - 0 ID=cds-OFT00065.1;Parent=gene-HMPREF3107_08585;Dbxref=NCBI_GP:OFT00065.1;Name=OFT00065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769938.1;locus_tag=HMPREF3107_08585;product=23S rRNA (uracil(1939)-C(5))-methyltransferase;protein_id=OFT00065.1;transl_table=11 KV790822.1 Genbank gene 76558 77517 . + . ID=gene-HMPREF3107_08590;Name=HMPREF3107_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08590 KV790822.1 Protein Homology CDS 76558 77517 . + 0 ID=cds-OFT00059.1;Parent=gene-HMPREF3107_08590;Dbxref=NCBI_GP:OFT00059.1;Name=OFT00059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769936.1;locus_tag=HMPREF3107_08590;product=L%2CD-transpeptidase catalytic domain protein;protein_id=OFT00059.1;transl_table=11 KV790822.1 Genbank gene 77682 78113 . + . ID=gene-HMPREF3107_08595;Name=HMPREF3107_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08595 KV790822.1 Protein Homology CDS 77682 78113 . + 0 ID=cds-OFT00060.1;Parent=gene-HMPREF3107_08595;Dbxref=NCBI_GP:OFT00060.1;Name=OFT00060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769932.1;locus_tag=HMPREF3107_08595;product=esterase;protein_id=OFT00060.1;transl_table=11 KV790822.1 Genbank gene 78364 78891 . + . ID=gene-HMPREF3107_08600;Name=HMPREF3107_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08600 KV790822.1 Protein Homology CDS 78364 78891 . + 0 ID=cds-OFT00061.1;Parent=gene-HMPREF3107_08600;Dbxref=NCBI_GP:OFT00061.1;Name=OFT00061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005701009.1;locus_tag=HMPREF3107_08600;product=hypothetical protein;protein_id=OFT00061.1;transl_table=11 ##sequence-region KV790823.1 1 171215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790823.1 Genbank region 1 171215 . + . ID=KV790823.1:1..171215;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790823.1 Genbank gene 261 1019 . + . ID=gene-HMPREF3107_08605;Name=HMPREF3107_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08605 KV790823.1 Protein Homology CDS 261 1019 . + 0 ID=cds-OFS99995.1;Parent=gene-HMPREF3107_08605;Dbxref=NCBI_GP:OFS99995.1;Name=OFS99995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311260.1;locus_tag=HMPREF3107_08605;product=carbonate dehydratase;protein_id=OFS99995.1;transl_table=11 KV790823.1 Genbank gene 1121 1468 . - . ID=gene-HMPREF3107_08610;Name=HMPREF3107_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08610 KV790823.1 Protein Homology CDS 1121 1468 . - 0 ID=cds-OFS99996.1;Parent=gene-HMPREF3107_08610;Dbxref=NCBI_GP:OFS99996.1;Name=OFS99996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770193.1;locus_tag=HMPREF3107_08610;product=hypothetical protein;protein_id=OFS99996.1;transl_table=11 KV790823.1 Genbank gene 1661 3199 . - . ID=gene-HMPREF3107_08615;Name=HMPREF3107_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08615 KV790823.1 Protein Homology CDS 1661 3199 . - 0 ID=cds-OFS99997.1;Parent=gene-HMPREF3107_08615;Dbxref=NCBI_GP:OFS99997.1;Name=OFS99997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115468.1;locus_tag=HMPREF3107_08615;product=lipid II flippase MurJ;protein_id=OFS99997.1;transl_table=11 KV790823.1 Genbank gene 3335 3814 . - . ID=gene-HMPREF3107_08620;Name=HMPREF3107_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08620 KV790823.1 GeneMarkS+ CDS 3335 3814 . - 0 ID=cds-OFS99998.1;Parent=gene-HMPREF3107_08620;Dbxref=NCBI_GP:OFS99998.1;Name=OFS99998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08620;product=hypothetical protein;protein_id=OFS99998.1;transl_table=11 KV790823.1 Genbank gene 3888 4499 . - . ID=gene-HMPREF3107_08625;Name=HMPREF3107_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08625 KV790823.1 Protein Homology CDS 3888 4499 . - 0 ID=cds-OFT00026.1;Parent=gene-HMPREF3107_08625;Dbxref=NCBI_GP:OFT00026.1;Name=OFT00026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273275.1;locus_tag=HMPREF3107_08625;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=OFT00026.1;transl_table=11 KV790823.1 Genbank gene 4496 5077 . - . ID=gene-HMPREF3107_08630;Name=HMPREF3107_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08630 KV790823.1 Protein Homology CDS 4496 5077 . - 0 ID=cds-OFS99999.1;Parent=gene-HMPREF3107_08630;Dbxref=NCBI_GP:OFS99999.1;Name=OFS99999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770203.1;locus_tag=HMPREF3107_08630;product=carbonic anhydrase;protein_id=OFS99999.1;transl_table=11 KV790823.1 Genbank gene 5152 5616 . - . ID=gene-HMPREF3107_08635;Name=HMPREF3107_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08635 KV790823.1 Protein Homology CDS 5152 5616 . - 0 ID=cds-OFT00027.1;Parent=gene-HMPREF3107_08635;Dbxref=NCBI_GP:OFT00027.1;Name=OFT00027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520884.1;locus_tag=HMPREF3107_08635;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=OFT00027.1;transl_table=11 KV790823.1 Genbank gene 5765 6208 . - . ID=gene-HMPREF3107_08640;Name=HMPREF3107_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08640 KV790823.1 Protein Homology CDS 5765 6208 . - 0 ID=cds-OFT00006.1;Parent=gene-HMPREF3107_08640;Dbxref=NCBI_GP:OFT00006.1;Name=OFT00006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770207.1;locus_tag=HMPREF3107_08640;product=transcriptional regulator;protein_id=OFT00006.1;transl_table=11 KV790823.1 Genbank gene 6433 7092 . - . ID=gene-HMPREF3107_08645;Name=HMPREF3107_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08645 KV790823.1 Protein Homology CDS 6433 7092 . - 0 ID=cds-OFT00007.1;Parent=gene-HMPREF3107_08645;Dbxref=NCBI_GP:OFT00007.1;Name=OFT00007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770209.1;locus_tag=HMPREF3107_08645;product=phosphoglycerate mutase;protein_id=OFT00007.1;transl_table=11 KV790823.1 Genbank gene 7239 8096 . + . ID=gene-HMPREF3107_08650;Name=HMPREF3107_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08650 KV790823.1 Protein Homology CDS 7239 8096 . + 0 ID=cds-OFT00008.1;Parent=gene-HMPREF3107_08650;Dbxref=NCBI_GP:OFT00008.1;Name=OFT00008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175077.1;locus_tag=HMPREF3107_08650;product=chromosome partitioning protein ParB;protein_id=OFT00008.1;transl_table=11 KV790823.1 Genbank gene 8407 8766 . + . ID=gene-HMPREF3107_08655;Name=HMPREF3107_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08655 KV790823.1 Protein Homology CDS 8407 8766 . + 0 ID=cds-OFT00009.1;Parent=gene-HMPREF3107_08655;Dbxref=NCBI_GP:OFT00009.1;Name=OFT00009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426364.1;locus_tag=HMPREF3107_08655;product=F0F1 ATP synthase subunit I;protein_id=OFT00009.1;transl_table=11 KV790823.1 Genbank gene 8750 9622 . + . ID=gene-HMPREF3107_08660;Name=HMPREF3107_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08660 KV790823.1 Protein Homology CDS 8750 9622 . + 0 ID=cds-OFT00010.1;Parent=gene-HMPREF3107_08660;Dbxref=NCBI_GP:OFT00010.1;Name=OFT00010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426365.1;locus_tag=HMPREF3107_08660;product=F0F1 ATP synthase subunit A;protein_id=OFT00010.1;transl_table=11 KV790823.1 Genbank gene 9736 9969 . + . ID=gene-HMPREF3107_08665;Name=HMPREF3107_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08665 KV790823.1 Protein Homology CDS 9736 9969 . + 0 ID=cds-OFT00011.1;Parent=gene-HMPREF3107_08665;Dbxref=NCBI_GP:OFT00011.1;Name=OFT00011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770218.1;locus_tag=HMPREF3107_08665;product=F0F1 ATP synthase subunit C;protein_id=OFT00011.1;transl_table=11 KV790823.1 Genbank gene 10043 10513 . + . ID=gene-HMPREF3107_08670;Name=HMPREF3107_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08670 KV790823.1 Protein Homology CDS 10043 10513 . + 0 ID=cds-OFT00012.1;Parent=gene-HMPREF3107_08670;Dbxref=NCBI_GP:OFT00012.1;Name=OFT00012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688126.1;locus_tag=HMPREF3107_08670;product=F0F1 ATP synthase subunit B;protein_id=OFT00012.1;transl_table=11 KV790823.1 Genbank gene 10517 11065 . + . ID=gene-HMPREF3107_08675;Name=HMPREF3107_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08675 KV790823.1 Protein Homology CDS 10517 11065 . + 0 ID=cds-OFT00013.1;Parent=gene-HMPREF3107_08675;Dbxref=NCBI_GP:OFT00013.1;Name=OFT00013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712708.1;locus_tag=HMPREF3107_08675;product=F0F1 ATP synthase subunit delta;protein_id=OFT00013.1;transl_table=11 KV790823.1 Genbank gene 11076 12623 . + . ID=gene-HMPREF3107_08680;Name=HMPREF3107_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08680 KV790823.1 Protein Homology CDS 11076 12623 . + 0 ID=cds-OFT00014.1;Parent=gene-HMPREF3107_08680;Dbxref=NCBI_GP:OFT00014.1;Name=OFT00014.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449548.1;locus_tag=HMPREF3107_08680;product=F0F1 ATP synthase subunit alpha;protein_id=OFT00014.1;transl_table=11 KV790823.1 Genbank gene 12646 13524 . + . ID=gene-HMPREF3107_08685;Name=HMPREF3107_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08685 KV790823.1 Protein Homology CDS 12646 13524 . + 0 ID=cds-OFT00015.1;Parent=gene-HMPREF3107_08685;Dbxref=NCBI_GP:OFT00015.1;Name=OFT00015.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770227.1;locus_tag=HMPREF3107_08685;product=F0F1 ATP synthase subunit gamma;protein_id=OFT00015.1;transl_table=11 KV790823.1 Genbank gene 13560 14957 . + . ID=gene-HMPREF3107_08690;Name=HMPREF3107_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08690 KV790823.1 Protein Homology CDS 13560 14957 . + 0 ID=cds-OFT00016.1;Parent=gene-HMPREF3107_08690;Dbxref=NCBI_GP:OFT00016.1;Name=OFT00016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688123.1;locus_tag=HMPREF3107_08690;product=F0F1 ATP synthase subunit beta;protein_id=OFT00016.1;transl_table=11 KV790823.1 Genbank gene 14970 15395 . + . ID=gene-HMPREF3107_08695;Name=HMPREF3107_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08695 KV790823.1 Protein Homology CDS 14970 15395 . + 0 ID=cds-OFT00017.1;Parent=gene-HMPREF3107_08695;Dbxref=NCBI_GP:OFT00017.1;Name=OFT00017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519002.1;locus_tag=HMPREF3107_08695;product=F0F1 ATP synthase subunit epsilon;protein_id=OFT00017.1;transl_table=11 KV790823.1 Genbank gene 15781 16176 . + . ID=gene-HMPREF3107_08700;Name=HMPREF3107_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08700 KV790823.1 Protein Homology CDS 15781 16176 . + 0 ID=cds-OFT00018.1;Parent=gene-HMPREF3107_08700;Dbxref=NCBI_GP:OFT00018.1;Name=OFT00018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770233.1;locus_tag=HMPREF3107_08700;product=meta domain protein;protein_id=OFT00018.1;transl_table=11 KV790823.1 Genbank gene 16304 17224 . - . ID=gene-HMPREF3107_08705;Name=HMPREF3107_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08705 KV790823.1 Protein Homology CDS 16304 17224 . - 0 ID=cds-OFT00019.1;Parent=gene-HMPREF3107_08705;Dbxref=NCBI_GP:OFT00019.1;Name=OFT00019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770238.1;locus_tag=HMPREF3107_08705;product=NUDIX hydrolase;protein_id=OFT00019.1;transl_table=11 KV790823.1 Genbank gene 17254 18015 . - . ID=gene-HMPREF3107_08710;Name=HMPREF3107_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08710 KV790823.1 Protein Homology CDS 17254 18015 . - 0 ID=cds-OFT00020.1;Parent=gene-HMPREF3107_08710;Dbxref=NCBI_GP:OFT00020.1;Name=OFT00020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770241.1;locus_tag=HMPREF3107_08710;product=16S rRNA methyltransferase;protein_id=OFT00020.1;transl_table=11 KV790823.1 Genbank gene 18115 18315 . - . ID=gene-HMPREF3107_08715;Name=HMPREF3107_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08715 KV790823.1 GeneMarkS+ CDS 18115 18315 . - 0 ID=cds-OFT00021.1;Parent=gene-HMPREF3107_08715;Dbxref=NCBI_GP:OFT00021.1;Name=OFT00021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08715;product=hypothetical protein;protein_id=OFT00021.1;transl_table=11 KV790823.1 Genbank gene 18567 19310 . - . ID=gene-HMPREF3107_08720;Name=HMPREF3107_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08720 KV790823.1 Protein Homology CDS 18567 19310 . - 0 ID=cds-OFT00022.1;Parent=gene-HMPREF3107_08720;Dbxref=NCBI_GP:OFT00022.1;Name=OFT00022.1;Note=NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770246.1;locus_tag=HMPREF3107_08720;product=nitroreductase A;protein_id=OFT00022.1;transl_table=11 KV790823.1 Genbank gene 19596 20780 . + . ID=gene-HMPREF3107_08725;Name=HMPREF3107_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08725 KV790823.1 Protein Homology CDS 19596 20780 . + 0 ID=cds-OFT00023.1;Parent=gene-HMPREF3107_08725;Dbxref=NCBI_GP:OFT00023.1;Name=OFT00023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235438.1;locus_tag=HMPREF3107_08725;product=ubiquinone biosynthesis protein UbiH;protein_id=OFT00023.1;transl_table=11 KV790823.1 Genbank gene 20872 21399 . + . ID=gene-HMPREF3107_08730;Name=HMPREF3107_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08730 KV790823.1 GeneMarkS+ CDS 20872 21399 . + 0 ID=cds-OFT00024.1;Parent=gene-HMPREF3107_08730;Dbxref=NCBI_GP:OFT00024.1;Name=OFT00024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08730;product=hypothetical protein;protein_id=OFT00024.1;transl_table=11 KV790823.1 Genbank gene 21486 22595 . - . ID=gene-HMPREF3107_08735;Name=HMPREF3107_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08735 KV790823.1 Protein Homology CDS 21486 22595 . - 0 ID=cds-OFT00025.1;Parent=gene-HMPREF3107_08735;Dbxref=NCBI_GP:OFT00025.1;Name=OFT00025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781810.1;locus_tag=HMPREF3107_08735;product=hypothetical protein;protein_id=OFT00025.1;transl_table=11 KV790823.1 Genbank gene 22735 22810 . + . ID=gene-HMPREF3107_08740;Name=HMPREF3107_08740;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_08740 KV790823.1 tRNAscan-SE tRNA 22735 22810 . + . ID=rna-HMPREF3107_08740;Parent=gene-HMPREF3107_08740;anticodon=(pos:22768..22770);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08740;product=tRNA-Thr KV790823.1 tRNAscan-SE exon 22735 22810 . + . ID=exon-HMPREF3107_08740-1;Parent=rna-HMPREF3107_08740;anticodon=(pos:22768..22770);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08740;product=tRNA-Thr KV790823.1 Genbank pseudogene 23152 23673 . - . ID=gene-HMPREF3107_08745;Name=HMPREF3107_08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08745;pseudo=true KV790823.1 Protein Homology CDS 23152 23673 . - 0 ID=cds-HMPREF3107_08745;Parent=gene-HMPREF3107_08745;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784179.1;locus_tag=HMPREF3107_08745;product=hypothetical protein;pseudo=true;transl_table=11 KV790823.1 Genbank pseudogene 23694 23959 . - . ID=gene-HMPREF3107_08750;Name=HMPREF3107_08750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_08750;pseudo=true KV790823.1 Protein Homology CDS 23694 23959 . - 0 ID=cds-HMPREF3107_08750;Parent=gene-HMPREF3107_08750;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003700334.1;locus_tag=HMPREF3107_08750;product=hypothetical protein;pseudo=true;transl_table=11 KV790823.1 Genbank gene 24100 25995 . - . ID=gene-HMPREF3107_08755;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08755 KV790823.1 Protein Homology CDS 24100 25995 . - 0 ID=cds-OFS99931.1;Parent=gene-HMPREF3107_08755;Dbxref=NCBI_GP:OFS99931.1;Name=OFS99931.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270047.1;locus_tag=HMPREF3107_08755;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG;protein_id=OFS99931.1;transl_table=11 KV790823.1 Genbank gene 26159 27040 . - . ID=gene-HMPREF3107_08760;Name=HMPREF3107_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08760 KV790823.1 Protein Homology CDS 26159 27040 . - 0 ID=cds-OFS99932.1;Parent=gene-HMPREF3107_08760;Dbxref=NCBI_GP:OFS99932.1;Name=OFS99932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693582.1;locus_tag=HMPREF3107_08760;product=hypothetical protein;protein_id=OFS99932.1;transl_table=11 KV790823.1 Genbank gene 27305 27886 . + . ID=gene-HMPREF3107_08765;Name=HMPREF3107_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08765 KV790823.1 Protein Homology CDS 27305 27886 . + 0 ID=cds-OFS99958.1;Parent=gene-HMPREF3107_08765;Dbxref=NCBI_GP:OFS99958.1;Name=OFS99958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684428.1;locus_tag=HMPREF3107_08765;product=peptidase;protein_id=OFS99958.1;transl_table=11 KV790823.1 Genbank gene 27883 28245 . + . ID=gene-HMPREF3107_08770;Name=HMPREF3107_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08770 KV790823.1 Protein Homology CDS 27883 28245 . + 0 ID=cds-OFS99933.1;Parent=gene-HMPREF3107_08770;Dbxref=NCBI_GP:OFS99933.1;Name=OFS99933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282808.1;locus_tag=HMPREF3107_08770;product=hypothetical protein;protein_id=OFS99933.1;transl_table=11 KV790823.1 Genbank gene 28343 29557 . + . ID=gene-HMPREF3107_08775;Name=HMPREF3107_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08775 KV790823.1 Protein Homology CDS 28343 29557 . + 0 ID=cds-OFS99934.1;Parent=gene-HMPREF3107_08775;Dbxref=NCBI_GP:OFS99934.1;Name=OFS99934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686565.1;locus_tag=HMPREF3107_08775;product=serine/threonine transporter SstT;protein_id=OFS99934.1;transl_table=11 KV790823.1 Genbank gene 29724 29799 . - . ID=gene-HMPREF3107_08780;Name=HMPREF3107_08780;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_08780 KV790823.1 tRNAscan-SE tRNA 29724 29799 . - . ID=rna-HMPREF3107_08780;Parent=gene-HMPREF3107_08780;anticodon=(pos:complement(29764..29766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08780;product=tRNA-Lys KV790823.1 tRNAscan-SE exon 29724 29799 . - . ID=exon-HMPREF3107_08780-1;Parent=rna-HMPREF3107_08780;anticodon=(pos:complement(29764..29766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_08780;product=tRNA-Lys KV790823.1 Genbank gene 29922 31955 . - . ID=gene-HMPREF3107_08785;Name=HMPREF3107_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08785 KV790823.1 Protein Homology CDS 29922 31955 . - 0 ID=cds-OFS99935.1;Parent=gene-HMPREF3107_08785;Dbxref=NCBI_GP:OFS99935.1;Name=OFS99935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770274.1;locus_tag=HMPREF3107_08785;product=oligopeptidase A;protein_id=OFS99935.1;transl_table=11 KV790823.1 Genbank gene 32137 34929 . + . ID=gene-HMPREF3107_08790;Name=HMPREF3107_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08790 KV790823.1 Protein Homology CDS 32137 34929 . + 0 ID=cds-OFS99959.1;Parent=gene-HMPREF3107_08790;Dbxref=NCBI_GP:OFS99959.1;Name=OFS99959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676015.1;locus_tag=HMPREF3107_08790;product=DNA polymerase I;protein_id=OFS99959.1;transl_table=11 KV790823.1 Genbank gene 34931 36346 . + . ID=gene-HMPREF3107_08795;Name=HMPREF3107_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08795 KV790823.1 GeneMarkS+ CDS 34931 36346 . + 0 ID=cds-OFS99936.1;Parent=gene-HMPREF3107_08795;Dbxref=NCBI_GP:OFS99936.1;Name=OFS99936.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08795;product=hypothetical protein;protein_id=OFS99936.1;transl_table=11 KV790823.1 Genbank gene 36465 36965 . + . ID=gene-HMPREF3107_08800;Name=HMPREF3107_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08800 KV790823.1 Protein Homology CDS 36465 36965 . + 0 ID=cds-OFS99937.1;Parent=gene-HMPREF3107_08800;Dbxref=NCBI_GP:OFS99937.1;Name=OFS99937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764578.1;locus_tag=HMPREF3107_08800;product=hypothetical protein;protein_id=OFS99937.1;transl_table=11 KV790823.1 Genbank gene 37148 37642 . + . ID=gene-HMPREF3107_08805;Name=HMPREF3107_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08805 KV790823.1 Protein Homology CDS 37148 37642 . + 0 ID=cds-OFS99938.1;Parent=gene-HMPREF3107_08805;Dbxref=NCBI_GP:OFS99938.1;Name=OFS99938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312456.1;locus_tag=HMPREF3107_08805;product=PduO protein;protein_id=OFS99938.1;transl_table=11 KV790823.1 Genbank gene 37841 40231 . + . ID=gene-HMPREF3107_08810;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF3107_08810 KV790823.1 Protein Homology CDS 37841 40231 . + 0 ID=cds-OFS99939.1;Parent=gene-HMPREF3107_08810;Dbxref=NCBI_GP:OFS99939.1;Name=OFS99939.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313090.1;locus_tag=HMPREF3107_08810;product=DNA gyrase subunit B;protein_id=OFS99939.1;transl_table=11 KV790823.1 Genbank gene 40296 41519 . - . ID=gene-HMPREF3107_08815;Name=HMPREF3107_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08815 KV790823.1 Protein Homology CDS 40296 41519 . - 0 ID=cds-OFS99940.1;Parent=gene-HMPREF3107_08815;Dbxref=NCBI_GP:OFS99940.1;Name=OFS99940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770282.1;locus_tag=HMPREF3107_08815;product=MFS transporter;protein_id=OFS99940.1;transl_table=11 KV790823.1 Genbank gene 42100 42279 . - . ID=gene-HMPREF3107_08820;Name=HMPREF3107_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08820 KV790823.1 GeneMarkS+ CDS 42100 42279 . - 0 ID=cds-OFS99941.1;Parent=gene-HMPREF3107_08820;Dbxref=NCBI_GP:OFS99941.1;Name=OFS99941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_08820;product=hypothetical protein;protein_id=OFS99941.1;transl_table=11 KV790823.1 Genbank gene 42356 42850 . - . ID=gene-HMPREF3107_08825;Name=HMPREF3107_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08825 KV790823.1 Protein Homology CDS 42356 42850 . - 0 ID=cds-OFS99942.1;Parent=gene-HMPREF3107_08825;Dbxref=NCBI_GP:OFS99942.1;Name=OFS99942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770289.1;locus_tag=HMPREF3107_08825;product=disulfide bond formation protein DsbB;protein_id=OFS99942.1;transl_table=11 KV790823.1 Genbank gene 42998 44329 . - . ID=gene-HMPREF3107_08830;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08830 KV790823.1 Protein Homology CDS 42998 44329 . - 0 ID=cds-OFS99960.1;Parent=gene-HMPREF3107_08830;Dbxref=NCBI_GP:OFS99960.1;Name=OFS99960.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285615.1;locus_tag=HMPREF3107_08830;product=metalloprotease PmbA;protein_id=OFS99960.1;transl_table=11 KV790823.1 Genbank gene 44445 44987 . + . ID=gene-HMPREF3107_08835;Name=HMPREF3107_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08835 KV790823.1 Protein Homology CDS 44445 44987 . + 0 ID=cds-OFS99943.1;Parent=gene-HMPREF3107_08835;Dbxref=NCBI_GP:OFS99943.1;Name=OFS99943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115957.1;locus_tag=HMPREF3107_08835;product=hypothetical protein;protein_id=OFS99943.1;transl_table=11 KV790823.1 Genbank gene 45079 45549 . + . ID=gene-HMPREF3107_08840;Name=HMPREF3107_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08840 KV790823.1 Protein Homology CDS 45079 45549 . + 0 ID=cds-OFS99944.1;Parent=gene-HMPREF3107_08840;Dbxref=NCBI_GP:OFS99944.1;Name=OFS99944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770297.1;locus_tag=HMPREF3107_08840;product=hypothetical protein;protein_id=OFS99944.1;transl_table=11 KV790823.1 Genbank gene 45805 47940 . + . ID=gene-HMPREF3107_08845;Name=HMPREF3107_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08845 KV790823.1 Protein Homology CDS 45805 47940 . + 0 ID=cds-OFS99945.1;Parent=gene-HMPREF3107_08845;Dbxref=NCBI_GP:OFS99945.1;Name=OFS99945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815907.1;locus_tag=HMPREF3107_08845;product=ATP-dependent DNA helicase DinG;protein_id=OFS99945.1;transl_table=11 KV790823.1 Genbank gene 48171 50063 . + . ID=gene-HMPREF3107_08850;Name=HMPREF3107_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08850 KV790823.1 Protein Homology CDS 48171 50063 . + 0 ID=cds-OFS99946.1;Parent=gene-HMPREF3107_08850;Dbxref=NCBI_GP:OFS99946.1;Name=OFS99946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341801.1;locus_tag=HMPREF3107_08850;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=OFS99946.1;transl_table=11 KV790823.1 Genbank gene 50143 50904 . + . ID=gene-HMPREF3107_08855;Name=HMPREF3107_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08855 KV790823.1 Protein Homology CDS 50143 50904 . + 0 ID=cds-OFS99961.1;Parent=gene-HMPREF3107_08855;Dbxref=NCBI_GP:OFS99961.1;Name=OFS99961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312489.1;locus_tag=HMPREF3107_08855;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=OFS99961.1;transl_table=11 KV790823.1 Genbank gene 51195 52226 . + . ID=gene-HMPREF3107_08860;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08860 KV790823.1 Protein Homology CDS 51195 52226 . + 0 ID=cds-OFS99947.1;Parent=gene-HMPREF3107_08860;Dbxref=NCBI_GP:OFS99947.1;Name=OFS99947.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448262.1;locus_tag=HMPREF3107_08860;product=erythrose-4-phosphate dehydrogenase;protein_id=OFS99947.1;transl_table=11 KV790823.1 Genbank gene 52310 53197 . - . ID=gene-HMPREF3107_08865;Name=HMPREF3107_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08865 KV790823.1 Protein Homology CDS 52310 53197 . - 0 ID=cds-OFS99948.1;Parent=gene-HMPREF3107_08865;Dbxref=NCBI_GP:OFS99948.1;Name=OFS99948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684134.1;locus_tag=HMPREF3107_08865;product=ribosomal protein L11 methyltransferase;protein_id=OFS99948.1;transl_table=11 KV790823.1 Genbank gene 53274 53993 . - . ID=gene-HMPREF3107_08870;Name=HMPREF3107_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08870 KV790823.1 Protein Homology CDS 53274 53993 . - 0 ID=cds-OFS99949.1;Parent=gene-HMPREF3107_08870;Dbxref=NCBI_GP:OFS99949.1;Name=OFS99949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283961.1;locus_tag=HMPREF3107_08870;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=OFS99949.1;transl_table=11 KV790823.1 Genbank gene 54135 54923 . + . ID=gene-HMPREF3107_08875;Name=HMPREF3107_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08875 KV790823.1 Protein Homology CDS 54135 54923 . + 0 ID=cds-OFS99950.1;Parent=gene-HMPREF3107_08875;Dbxref=NCBI_GP:OFS99950.1;Name=OFS99950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248144.1;locus_tag=HMPREF3107_08875;product=inositol monophosphatase;protein_id=OFS99950.1;transl_table=11 KV790823.1 Genbank gene 55932 57035 . - . ID=gene-HMPREF3107_08880;Name=HMPREF3107_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08880 KV790823.1 Protein Homology CDS 55932 57035 . - 0 ID=cds-OFS99951.1;Parent=gene-HMPREF3107_08880;Dbxref=NCBI_GP:OFS99951.1;Name=OFS99951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174415.1;locus_tag=HMPREF3107_08880;product=DNA polymerase III subunit beta;protein_id=OFS99951.1;transl_table=11 KV790823.1 Genbank gene 57055 58584 . - . ID=gene-HMPREF3107_08885;Name=HMPREF3107_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08885 KV790823.1 Protein Homology CDS 57055 58584 . - 0 ID=cds-OFS99962.1;Parent=gene-HMPREF3107_08885;Dbxref=NCBI_GP:OFS99962.1;Name=OFS99962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758099.1;locus_tag=HMPREF3107_08885;product=chromosomal replication initiation protein DnaA;protein_id=OFS99962.1;transl_table=11 KV790823.1 Genbank gene 58820 58954 . + . ID=gene-HMPREF3107_08890;Name=HMPREF3107_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08890 KV790823.1 Protein Homology CDS 58820 58954 . + 0 ID=cds-OFS99952.1;Parent=gene-HMPREF3107_08890;Dbxref=NCBI_GP:OFS99952.1;Name=OFS99952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958174.1;locus_tag=HMPREF3107_08890;product=50S ribosomal protein L34;protein_id=OFS99952.1;transl_table=11 KV790823.1 Genbank gene 58967 59305 . + . ID=gene-HMPREF3107_08895;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08895 KV790823.1 Protein Homology CDS 58967 59305 . + 0 ID=cds-OFS99953.1;Parent=gene-HMPREF3107_08895;Dbxref=NCBI_GP:OFS99953.1;Name=OFS99953.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427525.1;locus_tag=HMPREF3107_08895;product=ribonuclease P protein component;protein_id=OFS99953.1;transl_table=11 KV790823.1 Genbank gene 59302 59514 . + . ID=gene-HMPREF3107_08900;Name=HMPREF3107_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08900 KV790823.1 Protein Homology CDS 59302 59514 . + 0 ID=cds-OFS99954.1;Parent=gene-HMPREF3107_08900;Dbxref=NCBI_GP:OFS99954.1;Name=OFS99954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769318.1;locus_tag=HMPREF3107_08900;product=membrane protein insertion efficiency factor YidD;protein_id=OFS99954.1;transl_table=11 KV790823.1 Genbank gene 59759 61402 . + . ID=gene-HMPREF3107_08905;Name=HMPREF3107_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08905 KV790823.1 Protein Homology CDS 59759 61402 . + 0 ID=cds-OFS99955.1;Parent=gene-HMPREF3107_08905;Dbxref=NCBI_GP:OFS99955.1;Name=OFS99955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JW48.1;locus_tag=HMPREF3107_08905;product=membrane protein insertase YidC;protein_id=OFS99955.1;transl_table=11 KV790823.1 Genbank gene 61715 62257 . - . ID=gene-HMPREF3107_08910;Name=HMPREF3107_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08910 KV790823.1 Protein Homology CDS 61715 62257 . - 0 ID=cds-OFS99956.1;Parent=gene-HMPREF3107_08910;Dbxref=NCBI_GP:OFS99956.1;Name=OFS99956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769326.1;locus_tag=HMPREF3107_08910;product=hypothetical protein;protein_id=OFS99956.1;transl_table=11 KV790823.1 Genbank gene 62441 64078 . + . ID=gene-HMPREF3107_08915;Name=HMPREF3107_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08915 KV790823.1 Protein Homology CDS 62441 64078 . + 0 ID=cds-OFS99957.1;Parent=gene-HMPREF3107_08915;Dbxref=NCBI_GP:OFS99957.1;Name=OFS99957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218068.1;locus_tag=HMPREF3107_08915;product=hypothetical protein;protein_id=OFS99957.1;transl_table=11 KV790823.1 Genbank gene 64212 65750 . - . ID=gene-HMPREF3107_08920;Name=HMPREF3107_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08920 KV790823.1 Protein Homology CDS 64212 65750 . - 0 ID=cds-OFS99769.1;Parent=gene-HMPREF3107_08920;Dbxref=NCBI_GP:OFS99769.1;Name=OFS99769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271765.1;locus_tag=HMPREF3107_08920;product=trifunctional thioredoxin/methionine sulfoxide reductase A/B protein;protein_id=OFS99769.1;transl_table=11 KV790823.1 Genbank gene 66002 67444 . + . ID=gene-HMPREF3107_08925;Name=HMPREF3107_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08925 KV790823.1 Protein Homology CDS 66002 67444 . + 0 ID=cds-OFS99754.1;Parent=gene-HMPREF3107_08925;Dbxref=NCBI_GP:OFS99754.1;Name=OFS99754.1;Note=NAD-linked;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449564.1;locus_tag=HMPREF3107_08925;product=aldehyde dehydrogenase;protein_id=OFS99754.1;transl_table=11 KV790823.1 Genbank gene 67523 68560 . - . ID=gene-HMPREF3107_08930;Name=HMPREF3107_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08930 KV790823.1 Protein Homology CDS 67523 68560 . - 0 ID=cds-OFS99755.1;Parent=gene-HMPREF3107_08930;Dbxref=NCBI_GP:OFS99755.1;Name=OFS99755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769335.1;locus_tag=HMPREF3107_08930;product=2-nitropropane dioxygenase;protein_id=OFS99755.1;transl_table=11 KV790823.1 Genbank gene 68853 69956 . + . ID=gene-HMPREF3107_08935;Name=HMPREF3107_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08935 KV790823.1 Protein Homology CDS 68853 69956 . + 0 ID=cds-OFS99756.1;Parent=gene-HMPREF3107_08935;Dbxref=NCBI_GP:OFS99756.1;Name=OFS99756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449647.1;locus_tag=HMPREF3107_08935;product=peptide chain release factor 2;protein_id=OFS99756.1;transl_table=11 KV790823.1 Genbank gene 70022 70453 . + . ID=gene-HMPREF3107_08940;Name=HMPREF3107_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08940 KV790823.1 Protein Homology CDS 70022 70453 . + 0 ID=cds-OFS99757.1;Parent=gene-HMPREF3107_08940;Dbxref=NCBI_GP:OFS99757.1;Name=OFS99757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343826.1;locus_tag=HMPREF3107_08940;product=hypothetical protein;protein_id=OFS99757.1;transl_table=11 KV790823.1 Genbank gene 70515 70850 . + . ID=gene-HMPREF3107_08945;Name=HMPREF3107_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08945 KV790823.1 Protein Homology CDS 70515 70850 . + 0 ID=cds-OFS99758.1;Parent=gene-HMPREF3107_08945;Dbxref=NCBI_GP:OFS99758.1;Name=OFS99758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116541.1;locus_tag=HMPREF3107_08945;product=hypothetical protein;protein_id=OFS99758.1;transl_table=11 KV790823.1 Genbank gene 70905 71441 . + . ID=gene-HMPREF3107_08950;Name=HMPREF3107_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08950 KV790823.1 Protein Homology CDS 70905 71441 . + 0 ID=cds-OFS99759.1;Parent=gene-HMPREF3107_08950;Dbxref=NCBI_GP:OFS99759.1;Name=OFS99759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258268.1;locus_tag=HMPREF3107_08950;product=crossover junction endodeoxyribonuclease RuvC;protein_id=OFS99759.1;transl_table=11 KV790823.1 Genbank gene 71790 73589 . - . ID=gene-HMPREF3107_08955;Name=HMPREF3107_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08955 KV790823.1 Protein Homology CDS 71790 73589 . - 0 ID=cds-OFS99760.1;Parent=gene-HMPREF3107_08955;Dbxref=NCBI_GP:OFS99760.1;Name=OFS99760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285750.1;locus_tag=HMPREF3107_08955;product=ATP-dependent DNA helicase RecQ;protein_id=OFS99760.1;transl_table=11 KV790823.1 Genbank gene 73655 74095 . + . ID=gene-HMPREF3107_08960;Name=HMPREF3107_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08960 KV790823.1 Protein Homology CDS 73655 74095 . + 0 ID=cds-OFS99761.1;Parent=gene-HMPREF3107_08960;Dbxref=NCBI_GP:OFS99761.1;Name=OFS99761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769353.1;locus_tag=HMPREF3107_08960;product=hypothetical protein;protein_id=OFS99761.1;transl_table=11 KV790823.1 Genbank gene 74111 74431 . + . ID=gene-HMPREF3107_08965;Name=HMPREF3107_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08965 KV790823.1 Protein Homology CDS 74111 74431 . + 0 ID=cds-OFS99762.1;Parent=gene-HMPREF3107_08965;Dbxref=NCBI_GP:OFS99762.1;Name=OFS99762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769358.1;locus_tag=HMPREF3107_08965;product=hypothetical protein;protein_id=OFS99762.1;transl_table=11 KV790823.1 Genbank gene 74605 74970 . + . ID=gene-HMPREF3107_08970;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF3107_08970 KV790823.1 cmsearch RNase_P_RNA 74605 74970 . + . ID=rna-HMPREF3107_08970;Parent=gene-HMPREF3107_08970;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_08970;product=RNase P RNA component class A KV790823.1 cmsearch exon 74605 74970 . + . ID=exon-HMPREF3107_08970-1;Parent=rna-HMPREF3107_08970;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_08970;product=RNase P RNA component class A KV790823.1 Genbank gene 75003 75686 . + . ID=gene-HMPREF3107_08975;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=HMPREF3107_08975 KV790823.1 Protein Homology CDS 75003 75686 . + 0 ID=cds-OFS99763.1;Parent=gene-HMPREF3107_08975;Dbxref=NCBI_GP:OFS99763.1;Name=OFS99763.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270886.1;locus_tag=HMPREF3107_08975;product=phosphoglyceromutase;protein_id=OFS99763.1;transl_table=11 KV790823.1 Genbank gene 75787 77100 . - . ID=gene-HMPREF3107_08980;Name=HMPREF3107_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08980 KV790823.1 Protein Homology CDS 75787 77100 . - 0 ID=cds-OFS99764.1;Parent=gene-HMPREF3107_08980;Dbxref=NCBI_GP:OFS99764.1;Name=OFS99764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312668.1;locus_tag=HMPREF3107_08980;product=guanine permease;protein_id=OFS99764.1;transl_table=11 KV790823.1 Genbank gene 77185 78177 . - . ID=gene-HMPREF3107_08985;Name=HMPREF3107_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08985 KV790823.1 Protein Homology CDS 77185 78177 . - 0 ID=cds-OFS99765.1;Parent=gene-HMPREF3107_08985;Dbxref=NCBI_GP:OFS99765.1;Name=OFS99765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748049.1;locus_tag=HMPREF3107_08985;product=RNA pseudouridine synthase;protein_id=OFS99765.1;transl_table=11 KV790823.1 Genbank gene 78647 81514 . + . ID=gene-HMPREF3107_08990;Name=HMPREF3107_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08990 KV790823.1 Protein Homology CDS 78647 81514 . + 0 ID=cds-OFS99766.1;Parent=gene-HMPREF3107_08990;Dbxref=NCBI_GP:OFS99766.1;Name=OFS99766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769375.1;locus_tag=HMPREF3107_08990;product=ribonuclease E;protein_id=OFS99766.1;transl_table=11 KV790823.1 Genbank gene 81815 82450 . + . ID=gene-HMPREF3107_08995;Name=HMPREF3107_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_08995 KV790823.1 Protein Homology CDS 81815 82450 . + 0 ID=cds-OFS99770.1;Parent=gene-HMPREF3107_08995;Dbxref=NCBI_GP:OFS99770.1;Name=OFS99770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425961.1;locus_tag=HMPREF3107_08995;product=hypothetical protein;protein_id=OFS99770.1;transl_table=11 KV790823.1 Genbank gene 82699 82905 . - . ID=gene-HMPREF3107_09000;Name=HMPREF3107_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09000 KV790823.1 GeneMarkS+ CDS 82699 82905 . - 0 ID=cds-OFS99767.1;Parent=gene-HMPREF3107_09000;Dbxref=NCBI_GP:OFS99767.1;Name=OFS99767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09000;product=hypothetical protein;protein_id=OFS99767.1;transl_table=11 KV790823.1 Genbank gene 83522 85690 . + . ID=gene-HMPREF3107_09005;Name=HMPREF3107_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09005 KV790823.1 Protein Homology CDS 83522 85690 . + 0 ID=cds-OFS99768.1;Parent=gene-HMPREF3107_09005;Dbxref=NCBI_GP:OFS99768.1;Name=OFS99768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231861.1;locus_tag=HMPREF3107_09005;product=primosomal protein N';protein_id=OFS99768.1;transl_table=11 KV790823.1 Genbank gene 85807 86298 . - . ID=gene-HMPREF3107_09010;Name=HMPREF3107_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09010 KV790823.1 Protein Homology CDS 85807 86298 . - 0 ID=cds-OFS99689.1;Parent=gene-HMPREF3107_09010;Dbxref=NCBI_GP:OFS99689.1;Name=OFS99689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676062.1;locus_tag=HMPREF3107_09010;product=thioredoxin;protein_id=OFS99689.1;transl_table=11 KV790823.1 Genbank gene 86295 86693 . - . ID=gene-HMPREF3107_09015;Name=HMPREF3107_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09015 KV790823.1 Protein Homology CDS 86295 86693 . - 0 ID=cds-OFS99690.1;Parent=gene-HMPREF3107_09015;Dbxref=NCBI_GP:OFS99690.1;Name=OFS99690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769390.1;locus_tag=HMPREF3107_09015;product=thioesterase;protein_id=OFS99690.1;transl_table=11 KV790823.1 Genbank gene 86696 87055 . - . ID=gene-HMPREF3107_09020;Name=HMPREF3107_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09020 KV790823.1 Protein Homology CDS 86696 87055 . - 0 ID=cds-OFS99691.1;Parent=gene-HMPREF3107_09020;Dbxref=NCBI_GP:OFS99691.1;Name=OFS99691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681812.1;locus_tag=HMPREF3107_09020;product=VacJ;protein_id=OFS99691.1;transl_table=11 KV790823.1 Genbank gene 87135 87620 . - . ID=gene-HMPREF3107_09025;Name=HMPREF3107_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09025 KV790823.1 Protein Homology CDS 87135 87620 . - 0 ID=cds-OFS99692.1;Parent=gene-HMPREF3107_09025;Dbxref=NCBI_GP:OFS99692.1;Name=OFS99692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769393.1;locus_tag=HMPREF3107_09025;product=adenylate cyclase;protein_id=OFS99692.1;transl_table=11 KV790823.1 Genbank gene 87635 88057 . - . ID=gene-HMPREF3107_09030;Name=HMPREF3107_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09030 KV790823.1 Protein Homology CDS 87635 88057 . - 0 ID=cds-OFS99693.1;Parent=gene-HMPREF3107_09030;Dbxref=NCBI_GP:OFS99693.1;Name=OFS99693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343944.1;locus_tag=HMPREF3107_09030;product=hypothetical protein;protein_id=OFS99693.1;transl_table=11 KV790823.1 Genbank gene 88169 88441 . + . ID=gene-HMPREF3107_09035;Name=HMPREF3107_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09035 KV790823.1 Protein Homology CDS 88169 88441 . + 0 ID=cds-OFS99694.1;Parent=gene-HMPREF3107_09035;Dbxref=NCBI_GP:OFS99694.1;Name=OFS99694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762327.1;locus_tag=HMPREF3107_09035;product=hypothetical protein;protein_id=OFS99694.1;transl_table=11 KV790823.1 Genbank gene 88630 88971 . + . ID=gene-HMPREF3107_09040;Name=HMPREF3107_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09040 KV790823.1 Protein Homology CDS 88630 88971 . + 0 ID=cds-OFS99695.1;Parent=gene-HMPREF3107_09040;Dbxref=NCBI_GP:OFS99695.1;Name=OFS99695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742821.1;locus_tag=HMPREF3107_09040;product=murein hydrolase transporter LrgA;protein_id=OFS99695.1;transl_table=11 KV790823.1 Genbank gene 88973 89665 . + . ID=gene-HMPREF3107_09045;Name=HMPREF3107_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09045 KV790823.1 Protein Homology CDS 88973 89665 . + 0 ID=cds-OFS99696.1;Parent=gene-HMPREF3107_09045;Dbxref=NCBI_GP:OFS99696.1;Name=OFS99696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282658.1;locus_tag=HMPREF3107_09045;product=murein hydrolase transporter LrgB;protein_id=OFS99696.1;transl_table=11 KV790823.1 Genbank gene 89812 92118 . + . ID=gene-HMPREF3107_09050;Name=HMPREF3107_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09050 KV790823.1 Protein Homology CDS 89812 92118 . + 0 ID=cds-OFS99697.1;Parent=gene-HMPREF3107_09050;Dbxref=NCBI_GP:OFS99697.1;Name=OFS99697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769404.1;locus_tag=HMPREF3107_09050;product=DNA topoisomerase IV subunit A;protein_id=OFS99697.1;transl_table=11 KV790823.1 Genbank gene 92222 93817 . + . ID=gene-HMPREF3107_09055;Name=HMPREF3107_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09055 KV790823.1 Protein Homology CDS 92222 93817 . + 0 ID=cds-OFS99698.1;Parent=gene-HMPREF3107_09055;Dbxref=NCBI_GP:OFS99698.1;Name=OFS99698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518842.1;locus_tag=HMPREF3107_09055;product=histidine kinase;protein_id=OFS99698.1;transl_table=11 KV790823.1 Genbank gene 93807 95519 . + . ID=gene-HMPREF3107_09060;Name=HMPREF3107_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09060 KV790823.1 Protein Homology CDS 93807 95519 . + 0 ID=cds-OFS99699.1;Parent=gene-HMPREF3107_09060;Dbxref=NCBI_GP:OFS99699.1;Name=OFS99699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285969.1;locus_tag=HMPREF3107_09060;product=transcriptional regulator;protein_id=OFS99699.1;transl_table=11 KV790823.1 Genbank gene 95602 95886 . - . ID=gene-HMPREF3107_09065;Name=HMPREF3107_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09065 KV790823.1 Protein Homology CDS 95602 95886 . - 0 ID=cds-OFS99700.1;Parent=gene-HMPREF3107_09065;Dbxref=NCBI_GP:OFS99700.1;Name=OFS99700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684382.1;locus_tag=HMPREF3107_09065;product=peptidase propeptide and YPEB domain protein;protein_id=OFS99700.1;transl_table=11 KV790823.1 Genbank gene 96037 97041 . - . ID=gene-HMPREF3107_09070;Name=HMPREF3107_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09070 KV790823.1 Protein Homology CDS 96037 97041 . - 0 ID=cds-OFS99701.1;Parent=gene-HMPREF3107_09070;Dbxref=NCBI_GP:OFS99701.1;Name=OFS99701.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775994.1;locus_tag=HMPREF3107_09070;product=dihydroorotate dehydrogenase;protein_id=OFS99701.1;transl_table=11 KV790823.1 Genbank gene 97144 97683 . - . ID=gene-HMPREF3107_09075;Name=HMPREF3107_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09075 KV790823.1 Protein Homology CDS 97144 97683 . - 0 ID=cds-OFS99702.1;Parent=gene-HMPREF3107_09075;Dbxref=NCBI_GP:OFS99702.1;Name=OFS99702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313023.1;locus_tag=HMPREF3107_09075;product=hypothetical protein;protein_id=OFS99702.1;transl_table=11 KV790823.1 Genbank gene 97961 98890 . - . ID=gene-HMPREF3107_09080;Name=HMPREF3107_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09080 KV790823.1 Protein Homology CDS 97961 98890 . - 0 ID=cds-OFS99703.1;Parent=gene-HMPREF3107_09080;Dbxref=NCBI_GP:OFS99703.1;Name=OFS99703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426974.1;locus_tag=HMPREF3107_09080;product=esterase;protein_id=OFS99703.1;transl_table=11 KV790823.1 Genbank gene 99100 100011 . - . ID=gene-HMPREF3107_09085;Name=HMPREF3107_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09085 KV790823.1 Protein Homology CDS 99100 100011 . - 0 ID=cds-OFS99704.1;Parent=gene-HMPREF3107_09085;Dbxref=NCBI_GP:OFS99704.1;Name=OFS99704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769423.1;locus_tag=HMPREF3107_09085;product=cell division protein FtsX;protein_id=OFS99704.1;transl_table=11 KV790823.1 Genbank gene 100008 100661 . - . ID=gene-HMPREF3107_09090;Name=HMPREF3107_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09090 KV790823.1 Protein Homology CDS 100008 100661 . - 0 ID=cds-OFS99705.1;Parent=gene-HMPREF3107_09090;Dbxref=NCBI_GP:OFS99705.1;Name=OFS99705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823759.1;locus_tag=HMPREF3107_09090;product=cell division ATP-binding protein FtsE;protein_id=OFS99705.1;transl_table=11 KV790823.1 Genbank gene 100823 101545 . + . ID=gene-HMPREF3107_09095;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=HMPREF3107_09095 KV790823.1 Protein Homology CDS 100823 101545 . + 0 ID=cds-OFS99706.1;Parent=gene-HMPREF3107_09095;Dbxref=NCBI_GP:OFS99706.1;Name=OFS99706.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749320.1;locus_tag=HMPREF3107_09095;product=septum formation inhibitor;protein_id=OFS99706.1;transl_table=11 KV790823.1 Genbank gene 101602 102414 . + . ID=gene-HMPREF3107_09100;Name=HMPREF3107_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09100 KV790823.1 Protein Homology CDS 101602 102414 . + 0 ID=cds-OFS99707.1;Parent=gene-HMPREF3107_09100;Dbxref=NCBI_GP:OFS99707.1;Name=OFS99707.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175065.1;locus_tag=HMPREF3107_09100;product=septum site-determining protein MinD;protein_id=OFS99707.1;transl_table=11 KV790823.1 Genbank gene 102416 102679 . + . ID=gene-HMPREF3107_09105;Name=HMPREF3107_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09105 KV790823.1 Protein Homology CDS 102416 102679 . + 0 ID=cds-OFS99708.1;Parent=gene-HMPREF3107_09105;Dbxref=NCBI_GP:OFS99708.1;Name=OFS99708.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680625.1;locus_tag=HMPREF3107_09105;product=cell division topological specificity factor MinE;protein_id=OFS99708.1;transl_table=11 KV790823.1 Genbank gene 102683 103621 . + . ID=gene-HMPREF3107_09110;Name=HMPREF3107_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09110 KV790823.1 Protein Homology CDS 102683 103621 . + 0 ID=cds-OFS99709.1;Parent=gene-HMPREF3107_09110;Dbxref=NCBI_GP:OFS99709.1;Name=OFS99709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769436.1;locus_tag=HMPREF3107_09110;product=LysR family transcriptional regulator;protein_id=OFS99709.1;transl_table=11 KV790823.1 Genbank gene 103721 104110 . + . ID=gene-HMPREF3107_09115;Name=HMPREF3107_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09115 KV790823.1 Protein Homology CDS 103721 104110 . + 0 ID=cds-OFS99751.1;Parent=gene-HMPREF3107_09115;Dbxref=NCBI_GP:OFS99751.1;Name=OFS99751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283202.1;locus_tag=HMPREF3107_09115;product=ribosome silencing factor RsfS;protein_id=OFS99751.1;transl_table=11 KV790823.1 Genbank gene 104378 104926 . - . ID=gene-HMPREF3107_09120;Name=HMPREF3107_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09120 KV790823.1 Protein Homology CDS 104378 104926 . - 0 ID=cds-OFS99710.1;Parent=gene-HMPREF3107_09120;Dbxref=NCBI_GP:OFS99710.1;Name=OFS99710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449348.1;locus_tag=HMPREF3107_09120;product=gamma carbonic anhydrase family protein;protein_id=OFS99710.1;transl_table=11 KV790823.1 Genbank gene 105032 105517 . - . ID=gene-HMPREF3107_09125;Name=HMPREF3107_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09125 KV790823.1 Protein Homology CDS 105032 105517 . - 0 ID=cds-OFS99711.1;Parent=gene-HMPREF3107_09125;Dbxref=NCBI_GP:OFS99711.1;Name=OFS99711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282810.1;locus_tag=HMPREF3107_09125;product=ArsR family transcriptional regulator;protein_id=OFS99711.1;transl_table=11 KV790823.1 Genbank gene 105946 106764 . + . ID=gene-HMPREF3107_09130;Name=HMPREF3107_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09130 KV790823.1 Protein Homology CDS 105946 106764 . + 0 ID=cds-OFS99712.1;Parent=gene-HMPREF3107_09130;Dbxref=NCBI_GP:OFS99712.1;Name=OFS99712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271751.1;locus_tag=HMPREF3107_09130;product=iron transporter;protein_id=OFS99712.1;transl_table=11 KV790823.1 Genbank gene 106786 107967 . + . ID=gene-HMPREF3107_09135;Name=HMPREF3107_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09135 KV790823.1 Protein Homology CDS 106786 107967 . + 0 ID=cds-OFS99713.1;Parent=gene-HMPREF3107_09135;Dbxref=NCBI_GP:OFS99713.1;Name=OFS99713.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427607.1;locus_tag=HMPREF3107_09135;product=ferrous iron transporter;protein_id=OFS99713.1;transl_table=11 KV790823.1 Genbank gene 108253 109233 . - . ID=gene-HMPREF3107_09140;Name=HMPREF3107_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09140 KV790823.1 Protein Homology CDS 108253 109233 . - 0 ID=cds-OFS99714.1;Parent=gene-HMPREF3107_09140;Dbxref=NCBI_GP:OFS99714.1;Name=OFS99714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245862.1;locus_tag=HMPREF3107_09140;product=D-arabinose 5-phosphate isomerase;protein_id=OFS99714.1;transl_table=11 KV790823.1 Genbank gene 109308 110363 . + . ID=gene-HMPREF3107_09145;Name=HMPREF3107_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09145 KV790823.1 Protein Homology CDS 109308 110363 . + 0 ID=cds-OFS99715.1;Parent=gene-HMPREF3107_09145;Dbxref=NCBI_GP:OFS99715.1;Name=OFS99715.1;Note=catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K139.1;locus_tag=HMPREF3107_09145;product=transaldolase;protein_id=OFS99715.1;transl_table=11 KV790823.1 Genbank gene 110652 111044 . - . ID=gene-HMPREF3107_09150;Name=HMPREF3107_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09150 KV790823.1 Protein Homology CDS 110652 111044 . - 0 ID=cds-OFS99716.1;Parent=gene-HMPREF3107_09150;Dbxref=NCBI_GP:OFS99716.1;Name=OFS99716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958115.1;locus_tag=HMPREF3107_09150;product=30S ribosomal protein S9;protein_id=OFS99716.1;transl_table=11 KV790823.1 Genbank gene 111054 111485 . - . ID=gene-HMPREF3107_09155;Name=HMPREF3107_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09155 KV790823.1 Protein Homology CDS 111054 111485 . - 0 ID=cds-OFS99717.1;Parent=gene-HMPREF3107_09155;Dbxref=NCBI_GP:OFS99717.1;Name=OFS99717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343693.1;locus_tag=HMPREF3107_09155;product=50S ribosomal protein L13;protein_id=OFS99717.1;transl_table=11 KV790823.1 Genbank gene 111671 111850 . - . ID=gene-HMPREF3107_09160;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=HMPREF3107_09160 KV790823.1 cmsearch ncRNA 111671 111850 . - . ID=rna-HMPREF3107_09160;Parent=gene-HMPREF3107_09160;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_09160;product=6S RNA KV790823.1 cmsearch exon 111671 111850 . - . ID=exon-HMPREF3107_09160-1;Parent=rna-HMPREF3107_09160;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF3107_09160;product=6S RNA KV790823.1 Genbank gene 111859 112161 . - . ID=gene-HMPREF3107_09165;Name=HMPREF3107_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09165 KV790823.1 Protein Homology CDS 111859 112161 . - 0 ID=cds-OFS99718.1;Parent=gene-HMPREF3107_09165;Dbxref=NCBI_GP:OFS99718.1;Name=OFS99718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769462.1;locus_tag=HMPREF3107_09165;product=cell division protein ZapA;protein_id=OFS99718.1;transl_table=11 KV790823.1 Genbank gene 112158 112505 . - . ID=gene-HMPREF3107_09170;Name=HMPREF3107_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09170 KV790823.1 Protein Homology CDS 112158 112505 . - 0 ID=cds-OFS99719.1;Parent=gene-HMPREF3107_09170;Dbxref=NCBI_GP:OFS99719.1;Name=OFS99719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769464.1;locus_tag=HMPREF3107_09170;product=hypothetical protein;protein_id=OFS99719.1;transl_table=11 KV790823.1 Genbank gene 112555 113544 . - . ID=gene-HMPREF3107_09175;Name=HMPREF3107_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09175 KV790823.1 Protein Homology CDS 112555 113544 . - 0 ID=cds-OFS99720.1;Parent=gene-HMPREF3107_09175;Dbxref=NCBI_GP:OFS99720.1;Name=OFS99720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686481.1;locus_tag=HMPREF3107_09175;product=glycerol-3-phosphate dehydrogenase;protein_id=OFS99720.1;transl_table=11 KV790823.1 Genbank gene 113758 115059 . - . ID=gene-HMPREF3107_09180;Name=HMPREF3107_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09180 KV790823.1 Protein Homology CDS 113758 115059 . - 0 ID=cds-OFS99721.1;Parent=gene-HMPREF3107_09180;Dbxref=NCBI_GP:OFS99721.1;Name=OFS99721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769467.1;locus_tag=HMPREF3107_09180;product=two-component sensor histidine kinase;protein_id=OFS99721.1;transl_table=11 KV790823.1 Genbank gene 115492 117081 . + . ID=gene-HMPREF3107_09185;Name=HMPREF3107_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09185 KV790823.1 Protein Homology CDS 115492 117081 . + 0 ID=cds-OFS99722.1;Parent=gene-HMPREF3107_09185;Dbxref=NCBI_GP:OFS99722.1;Name=OFS99722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769468.1;locus_tag=HMPREF3107_09185;product=phosphate permease;protein_id=OFS99722.1;transl_table=11 KV790823.1 Genbank gene 117214 118893 . + . ID=gene-HMPREF3107_09190;Name=HMPREF3107_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09190 KV790823.1 Protein Homology CDS 117214 118893 . + 0 ID=cds-OFS99723.1;Parent=gene-HMPREF3107_09190;Dbxref=NCBI_GP:OFS99723.1;Name=OFS99723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212332.1;locus_tag=HMPREF3107_09190;product=type IV-A pilus assembly ATPase PilB;protein_id=OFS99723.1;transl_table=11 KV790823.1 Genbank gene 118918 120141 . + . ID=gene-HMPREF3107_09195;Name=HMPREF3107_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09195 KV790823.1 Protein Homology CDS 118918 120141 . + 0 ID=cds-OFS99724.1;Parent=gene-HMPREF3107_09195;Dbxref=NCBI_GP:OFS99724.1;Name=OFS99724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341356.1;locus_tag=HMPREF3107_09195;product=type II secretion system protein F;protein_id=OFS99724.1;transl_table=11 KV790823.1 Genbank gene 120149 121030 . + . ID=gene-HMPREF3107_09200;Name=HMPREF3107_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09200 KV790823.1 Protein Homology CDS 120149 121030 . + 0 ID=cds-OFS99725.1;Parent=gene-HMPREF3107_09200;Dbxref=NCBI_GP:OFS99725.1;Name=OFS99725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769479.1;locus_tag=HMPREF3107_09200;product=methyltransferase;protein_id=OFS99725.1;transl_table=11 KV790823.1 Genbank gene 121030 121632 . + . ID=gene-HMPREF3107_09205;Name=HMPREF3107_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09205 KV790823.1 Protein Homology CDS 121030 121632 . + 0 ID=cds-OFS99726.1;Parent=gene-HMPREF3107_09205;Dbxref=NCBI_GP:OFS99726.1;Name=OFS99726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425280.1;locus_tag=HMPREF3107_09205;product=dephospho-CoA kinase;protein_id=OFS99726.1;transl_table=11 KV790823.1 Genbank gene 121647 122408 . + . ID=gene-HMPREF3107_09210;Name=HMPREF3107_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09210 KV790823.1 Protein Homology CDS 121647 122408 . + 0 ID=cds-OFS99727.1;Parent=gene-HMPREF3107_09210;Dbxref=NCBI_GP:OFS99727.1;Name=OFS99727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769485.1;locus_tag=HMPREF3107_09210;product=cell division protein ZapD;protein_id=OFS99727.1;transl_table=11 KV790823.1 Genbank gene 122755 122973 . - . ID=gene-HMPREF3107_09215;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HMPREF3107_09215 KV790823.1 Protein Homology CDS 122755 122973 . - 0 ID=cds-OFS99728.1;Parent=gene-HMPREF3107_09215;Dbxref=NCBI_GP:OFS99728.1;Name=OFS99728.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003788541.1;locus_tag=HMPREF3107_09215;product=50S ribosomal protein L31;protein_id=OFS99728.1;transl_table=11 KV790823.1 Genbank gene 123108 123326 . - . ID=gene-HMPREF3107_09220;Name=HMPREF3107_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09220 KV790823.1 Protein Homology CDS 123108 123326 . - 0 ID=cds-OFS99729.1;Parent=gene-HMPREF3107_09220;Dbxref=NCBI_GP:OFS99729.1;Name=OFS99729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283268.1;locus_tag=HMPREF3107_09220;product=hypothetical protein;protein_id=OFS99729.1;transl_table=11 KV790823.1 Genbank gene 123327 124709 . - . ID=gene-HMPREF3107_09225;Name=HMPREF3107_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09225 KV790823.1 Protein Homology CDS 123327 124709 . - 0 ID=cds-OFS99730.1;Parent=gene-HMPREF3107_09225;Dbxref=NCBI_GP:OFS99730.1;Name=OFS99730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273550.1;locus_tag=HMPREF3107_09225;product=sodium:proton antiporter;protein_id=OFS99730.1;transl_table=11 KV790823.1 Genbank gene 125003 125974 . - . ID=gene-HMPREF3107_09230;Name=HMPREF3107_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09230 KV790823.1 Protein Homology CDS 125003 125974 . - 0 ID=cds-OFS99752.1;Parent=gene-HMPREF3107_09230;Dbxref=NCBI_GP:OFS99752.1;Name=OFS99752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425827.1;locus_tag=HMPREF3107_09230;product=hypothetical protein;protein_id=OFS99752.1;transl_table=11 KV790823.1 Genbank gene 126145 127470 . + . ID=gene-HMPREF3107_09235;Name=HMPREF3107_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09235 KV790823.1 Protein Homology CDS 126145 127470 . + 0 ID=cds-OFS99731.1;Parent=gene-HMPREF3107_09235;Dbxref=NCBI_GP:OFS99731.1;Name=OFS99731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769500.1;locus_tag=HMPREF3107_09235;product=peptidase M23;protein_id=OFS99731.1;transl_table=11 KV790823.1 Genbank gene 127765 131103 . - . ID=gene-HMPREF3107_09240;Name=HMPREF3107_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09240 KV790823.1 GeneMarkS+ CDS 127765 131103 . - 0 ID=cds-OFS99732.1;Parent=gene-HMPREF3107_09240;Dbxref=NCBI_GP:OFS99732.1;Name=OFS99732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09240;product=hypothetical protein;protein_id=OFS99732.1;transl_table=11 KV790823.1 Genbank gene 131361 131597 . - . ID=gene-HMPREF3107_09245;Name=HMPREF3107_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09245 KV790823.1 GeneMarkS+ CDS 131361 131597 . - 0 ID=cds-OFS99733.1;Parent=gene-HMPREF3107_09245;Dbxref=NCBI_GP:OFS99733.1;Name=OFS99733.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09245;product=hypothetical protein;protein_id=OFS99733.1;transl_table=11 KV790823.1 Genbank gene 132094 133290 . - . ID=gene-HMPREF3107_09250;Name=HMPREF3107_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09250 KV790823.1 Protein Homology CDS 132094 133290 . - 0 ID=cds-OFS99734.1;Parent=gene-HMPREF3107_09250;Dbxref=NCBI_GP:OFS99734.1;Name=OFS99734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015257205.1;locus_tag=HMPREF3107_09250;product=phosphoglycerate kinase;protein_id=OFS99734.1;transl_table=11 KV790823.1 Genbank gene 133418 133909 . + . ID=gene-HMPREF3107_09255;Name=HMPREF3107_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09255 KV790823.1 Protein Homology CDS 133418 133909 . + 0 ID=cds-OFS99735.1;Parent=gene-HMPREF3107_09255;Dbxref=NCBI_GP:OFS99735.1;Name=OFS99735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769509.1;locus_tag=HMPREF3107_09255;product=acetyltransferase;protein_id=OFS99735.1;transl_table=11 KV790823.1 Genbank gene 133961 134434 . - . ID=gene-HMPREF3107_09260;Name=HMPREF3107_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09260 KV790823.1 Protein Homology CDS 133961 134434 . - 0 ID=cds-OFS99736.1;Parent=gene-HMPREF3107_09260;Dbxref=NCBI_GP:OFS99736.1;Name=OFS99736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686513.1;locus_tag=HMPREF3107_09260;product=thioredoxin;protein_id=OFS99736.1;transl_table=11 KV790823.1 Genbank gene 134576 134938 . + . ID=gene-HMPREF3107_09265;Name=HMPREF3107_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09265 KV790823.1 Protein Homology CDS 134576 134938 . + 0 ID=cds-OFS99737.1;Parent=gene-HMPREF3107_09265;Dbxref=NCBI_GP:OFS99737.1;Name=OFS99737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271974.1;locus_tag=HMPREF3107_09265;product=arsenate reductase (glutaredoxin);protein_id=OFS99737.1;transl_table=11 KV790823.1 Genbank gene 134976 135635 . + . ID=gene-HMPREF3107_09270;Name=HMPREF3107_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09270 KV790823.1 Protein Homology CDS 134976 135635 . + 0 ID=cds-OFS99738.1;Parent=gene-HMPREF3107_09270;Dbxref=NCBI_GP:OFS99738.1;Name=OFS99738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341303.1;locus_tag=HMPREF3107_09270;product=multidrug MFS transporter;protein_id=OFS99738.1;transl_table=11 KV790823.1 Genbank gene 135927 137096 . + . ID=gene-HMPREF3107_09275;Name=HMPREF3107_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09275 KV790823.1 Protein Homology CDS 135927 137096 . + 0 ID=cds-OFS99753.1;Parent=gene-HMPREF3107_09275;Dbxref=NCBI_GP:OFS99753.1;Name=OFS99753.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240743.1;locus_tag=HMPREF3107_09275;product=methionine adenosyltransferase;protein_id=OFS99753.1;transl_table=11 KV790823.1 Genbank gene 137227 137487 . + . ID=gene-HMPREF3107_09280;Name=HMPREF3107_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09280 KV790823.1 Protein Homology CDS 137227 137487 . + 0 ID=cds-OFS99739.1;Parent=gene-HMPREF3107_09280;Dbxref=NCBI_GP:OFS99739.1;Name=OFS99739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741129.1;locus_tag=HMPREF3107_09280;product=glutaredoxin;protein_id=OFS99739.1;transl_table=11 KV790823.1 Genbank gene 137575 138015 . + . ID=gene-HMPREF3107_09285;Name=HMPREF3107_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09285 KV790823.1 Protein Homology CDS 137575 138015 . + 0 ID=cds-OFS99740.1;Parent=gene-HMPREF3107_09285;Dbxref=NCBI_GP:OFS99740.1;Name=OFS99740.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745844.1;locus_tag=HMPREF3107_09285;product=protein-export chaperone SecB;protein_id=OFS99740.1;transl_table=11 KV790823.1 Genbank gene 138135 139088 . - . ID=gene-HMPREF3107_09290;Name=HMPREF3107_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09290 KV790823.1 Protein Homology CDS 138135 139088 . - 0 ID=cds-OFS99741.1;Parent=gene-HMPREF3107_09290;Dbxref=NCBI_GP:OFS99741.1;Name=OFS99741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002228827.1;locus_tag=HMPREF3107_09290;product=hydroxyacid dehydrogenase;protein_id=OFS99741.1;transl_table=11 KV790823.1 Genbank gene 139216 139443 . - . ID=gene-HMPREF3107_09295;Name=HMPREF3107_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09295 KV790823.1 Protein Homology CDS 139216 139443 . - 0 ID=cds-OFS99742.1;Parent=gene-HMPREF3107_09295;Dbxref=NCBI_GP:OFS99742.1;Name=OFS99742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448231.1;locus_tag=HMPREF3107_09295;product=enterochelin ABC transporter;protein_id=OFS99742.1;transl_table=11 KV790823.1 Genbank gene 139520 142348 . - . ID=gene-HMPREF3107_09300;Name=HMPREF3107_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09300 KV790823.1 Protein Homology CDS 139520 142348 . - 0 ID=cds-OFS99743.1;Parent=gene-HMPREF3107_09300;Dbxref=NCBI_GP:OFS99743.1;Name=OFS99743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815966.1;locus_tag=HMPREF3107_09300;product=valine--tRNA ligase;protein_id=OFS99743.1;transl_table=11 KV790823.1 Genbank gene 142439 142921 . - . ID=gene-HMPREF3107_09305;Name=HMPREF3107_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09305 KV790823.1 GeneMarkS+ CDS 142439 142921 . - 0 ID=cds-OFS99744.1;Parent=gene-HMPREF3107_09305;Dbxref=NCBI_GP:OFS99744.1;Name=OFS99744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09305;product=hypothetical protein;protein_id=OFS99744.1;transl_table=11 KV790823.1 Genbank gene 143401 144066 . + . ID=gene-HMPREF3107_09310;Name=HMPREF3107_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09310 KV790823.1 Protein Homology CDS 143401 144066 . + 0 ID=cds-OFS99745.1;Parent=gene-HMPREF3107_09310;Dbxref=NCBI_GP:OFS99745.1;Name=OFS99745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343665.1;locus_tag=HMPREF3107_09310;product=hypothetical protein;protein_id=OFS99745.1;transl_table=11 KV790823.1 Genbank gene 144196 145947 . - . ID=gene-HMPREF3107_09315;Name=HMPREF3107_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09315 KV790823.1 Protein Homology CDS 144196 145947 . - 0 ID=cds-OFS99746.1;Parent=gene-HMPREF3107_09315;Dbxref=NCBI_GP:OFS99746.1;Name=OFS99746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343689.1;locus_tag=HMPREF3107_09315;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=OFS99746.1;transl_table=11 KV790823.1 Genbank gene 145949 146218 . - . ID=gene-HMPREF3107_09320;Name=HMPREF3107_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09320 KV790823.1 Protein Homology CDS 145949 146218 . - 0 ID=cds-OFS99747.1;Parent=gene-HMPREF3107_09320;Dbxref=NCBI_GP:OFS99747.1;Name=OFS99747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174431.1;locus_tag=HMPREF3107_09320;product=phosphocarrier protein HPr;protein_id=OFS99747.1;transl_table=11 KV790823.1 Genbank gene 146222 146629 . - . ID=gene-HMPREF3107_09325;Name=HMPREF3107_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09325 KV790823.1 Protein Homology CDS 146222 146629 . - 0 ID=cds-OFS99748.1;Parent=gene-HMPREF3107_09325;Dbxref=NCBI_GP:OFS99748.1;Name=OFS99748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769552.1;locus_tag=HMPREF3107_09325;product=PTS mannose transporter subunit IIA;protein_id=OFS99748.1;transl_table=11 KV790823.1 Genbank gene 146806 147435 . - . ID=gene-HMPREF3107_09330;Name=HMPREF3107_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09330 KV790823.1 Protein Homology CDS 146806 147435 . - 0 ID=cds-OFS99749.1;Parent=gene-HMPREF3107_09330;Dbxref=NCBI_GP:OFS99749.1;Name=OFS99749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769554.1;locus_tag=HMPREF3107_09330;product=16S rRNA methyltransferase G;protein_id=OFS99749.1;transl_table=11 KV790823.1 Genbank gene 147586 148404 . + . ID=gene-HMPREF3107_09335;Name=HMPREF3107_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09335 KV790823.1 GeneMarkS+ CDS 147586 148404 . + 0 ID=cds-OFS99750.1;Parent=gene-HMPREF3107_09335;Dbxref=NCBI_GP:OFS99750.1;Name=OFS99750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09335;product=hypothetical protein;protein_id=OFS99750.1;transl_table=11 KV790823.1 Genbank gene 148752 150281 . + . ID=gene-HMPREF3107_09340;Name=HMPREF3107_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09340 KV790823.1 Protein Homology CDS 148752 150281 . + 0 ID=cds-OFS99652.1;Parent=gene-HMPREF3107_09340;Dbxref=NCBI_GP:OFS99652.1;Name=OFS99652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313148.1;locus_tag=HMPREF3107_09340;product=ABC transporter permease;protein_id=OFS99652.1;transl_table=11 KV790823.1 Genbank pseudogene 150547 151556 . + . ID=gene-HMPREF3107_09345;Name=HMPREF3107_09345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_09345;pseudo=true KV790823.1 Protein Homology CDS 150547 151556 . + 0 ID=cds-HMPREF3107_09345;Parent=gene-HMPREF3107_09345;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269965.1;locus_tag=HMPREF3107_09345;product=protease;pseudo=true;transl_table=11 KV790823.1 Genbank gene 151833 152702 . - . ID=gene-HMPREF3107_09350;Name=HMPREF3107_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09350 KV790823.1 Protein Homology CDS 151833 152702 . - 0 ID=cds-OFS99653.1;Parent=gene-HMPREF3107_09350;Dbxref=NCBI_GP:OFS99653.1;Name=OFS99653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003821763.1;locus_tag=HMPREF3107_09350;product=dienelactone hydrolase;protein_id=OFS99653.1;transl_table=11 KV790823.1 Genbank gene 152796 153128 . + . ID=gene-HMPREF3107_09355;Name=HMPREF3107_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09355 KV790823.1 Protein Homology CDS 152796 153128 . + 0 ID=cds-OFS99654.1;Parent=gene-HMPREF3107_09355;Dbxref=NCBI_GP:OFS99654.1;Name=OFS99654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766521.1;locus_tag=HMPREF3107_09355;product=hypothetical protein;protein_id=OFS99654.1;transl_table=11 KV790823.1 Genbank gene 153140 153406 . + . ID=gene-HMPREF3107_09360;Name=HMPREF3107_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09360 KV790823.1 Protein Homology CDS 153140 153406 . + 0 ID=cds-OFS99655.1;Parent=gene-HMPREF3107_09360;Dbxref=NCBI_GP:OFS99655.1;Name=OFS99655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779526.1;locus_tag=HMPREF3107_09360;product=hypothetical protein;protein_id=OFS99655.1;transl_table=11 KV790823.1 Genbank gene 153433 154353 . + . ID=gene-HMPREF3107_09365;Name=HMPREF3107_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09365 KV790823.1 Protein Homology CDS 153433 154353 . + 0 ID=cds-OFS99656.1;Parent=gene-HMPREF3107_09365;Dbxref=NCBI_GP:OFS99656.1;Name=OFS99656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769565.1;locus_tag=HMPREF3107_09365;product=U32 family peptidase;protein_id=OFS99656.1;transl_table=11 KV790823.1 Genbank gene 154365 154811 . + . ID=gene-HMPREF3107_09370;Name=HMPREF3107_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09370 KV790823.1 Protein Homology CDS 154365 154811 . + 0 ID=cds-OFS99657.1;Parent=gene-HMPREF3107_09370;Dbxref=NCBI_GP:OFS99657.1;Name=OFS99657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769566.1;locus_tag=HMPREF3107_09370;product=Sterol-binding domain protein;protein_id=OFS99657.1;transl_table=11 KV790823.1 Genbank gene 155000 155293 . - . ID=gene-HMPREF3107_09375;Name=HMPREF3107_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09375 KV790823.1 Protein Homology CDS 155000 155293 . - 0 ID=cds-OFS99658.1;Parent=gene-HMPREF3107_09375;Dbxref=NCBI_GP:OFS99658.1;Name=OFS99658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426463.1;locus_tag=HMPREF3107_09375;product=transcriptional regulator;protein_id=OFS99658.1;transl_table=11 KV790823.1 Genbank gene 155704 156480 . - . ID=gene-HMPREF3107_09380;Name=HMPREF3107_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09380 KV790823.1 Protein Homology CDS 155704 156480 . - 0 ID=cds-OFS99659.1;Parent=gene-HMPREF3107_09380;Dbxref=NCBI_GP:OFS99659.1;Name=OFS99659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285613.1;locus_tag=HMPREF3107_09380;product=type I methionyl aminopeptidase;protein_id=OFS99659.1;transl_table=11 KV790823.1 Genbank gene 156585 157409 . - . ID=gene-HMPREF3107_09385;Name=HMPREF3107_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09385 KV790823.1 Protein Homology CDS 156585 157409 . - 0 ID=cds-OFS99660.1;Parent=gene-HMPREF3107_09385;Dbxref=NCBI_GP:OFS99660.1;Name=OFS99660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769575.1;locus_tag=HMPREF3107_09385;product=hypothetical protein;protein_id=OFS99660.1;transl_table=11 KV790823.1 Genbank gene 157655 159556 . - . ID=gene-HMPREF3107_09390;Name=HMPREF3107_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09390 KV790823.1 Protein Homology CDS 157655 159556 . - 0 ID=cds-OFS99661.1;Parent=gene-HMPREF3107_09390;Dbxref=NCBI_GP:OFS99661.1;Name=OFS99661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F588.1;locus_tag=HMPREF3107_09390;product=phosphomethylpyrimidine synthase ThiC;protein_id=OFS99661.1;transl_table=11 KV790823.1 cmsearch binding_site 159649 159748 . - . ID=id-KV790823.1:159649..159748;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV790823.1 Genbank gene 159830 159906 . + . ID=gene-HMPREF3107_09395;Name=HMPREF3107_09395;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_09395 KV790823.1 tRNAscan-SE tRNA 159830 159906 . + . ID=rna-HMPREF3107_09395;Parent=gene-HMPREF3107_09395;anticodon=(pos:159864..159866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_09395;product=tRNA-Met KV790823.1 tRNAscan-SE exon 159830 159906 . + . ID=exon-HMPREF3107_09395-1;Parent=rna-HMPREF3107_09395;anticodon=(pos:159864..159866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_09395;product=tRNA-Met KV790823.1 Genbank gene 160094 160978 . + . ID=gene-HMPREF3107_09400;Name=HMPREF3107_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09400 KV790823.1 Protein Homology CDS 160094 160978 . + 0 ID=cds-OFS99662.1;Parent=gene-HMPREF3107_09400;Dbxref=NCBI_GP:OFS99662.1;Name=OFS99662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769580.1;locus_tag=HMPREF3107_09400;product=chorismate mutase;protein_id=OFS99662.1;transl_table=11 KV790823.1 Genbank gene 161149 161778 . - . ID=gene-HMPREF3107_09405;Name=HMPREF3107_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09405 KV790823.1 Protein Homology CDS 161149 161778 . - 0 ID=cds-OFS99663.1;Parent=gene-HMPREF3107_09405;Dbxref=NCBI_GP:OFS99663.1;Name=OFS99663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769582.1;locus_tag=HMPREF3107_09405;product=acetyltransferase;protein_id=OFS99663.1;transl_table=11 KV790823.1 Genbank gene 161777 161980 . + . ID=gene-HMPREF3107_09410;Name=HMPREF3107_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09410 KV790823.1 GeneMarkS+ CDS 161777 161980 . + 0 ID=cds-OFS99664.1;Parent=gene-HMPREF3107_09410;Dbxref=NCBI_GP:OFS99664.1;Name=OFS99664.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09410;product=hypothetical protein;protein_id=OFS99664.1;transl_table=11 KV790823.1 Genbank gene 161977 163959 . - . ID=gene-HMPREF3107_09415;Name=HMPREF3107_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09415 KV790823.1 Protein Homology CDS 161977 163959 . - 0 ID=cds-OFS99665.1;Parent=gene-HMPREF3107_09415;Dbxref=NCBI_GP:OFS99665.1;Name=OFS99665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448597.1;locus_tag=HMPREF3107_09415;product=DNA topoisomerase IV subunit B;protein_id=OFS99665.1;transl_table=11 KV790823.1 Genbank gene 164162 166291 . + . ID=gene-HMPREF3107_09420;Name=HMPREF3107_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09420 KV790823.1 Protein Homology CDS 164162 166291 . + 0 ID=cds-OFS99666.1;Parent=gene-HMPREF3107_09420;Dbxref=NCBI_GP:OFS99666.1;Name=OFS99666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426796.1;locus_tag=HMPREF3107_09420;product=membrane assembly protein AsmA;protein_id=OFS99666.1;transl_table=11 KV790823.1 Genbank gene 166626 167927 . + . ID=gene-HMPREF3107_09425;Name=HMPREF3107_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09425 KV790823.1 Protein Homology CDS 166626 167927 . + 0 ID=cds-OFS99667.1;Parent=gene-HMPREF3107_09425;Dbxref=NCBI_GP:OFS99667.1;Name=OFS99667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342594.1;locus_tag=HMPREF3107_09425;product=tRNA(Ile)-lysidine synthetase;protein_id=OFS99667.1;transl_table=11 KV790823.1 Genbank gene 168067 168876 . + . ID=gene-HMPREF3107_09430;Name=HMPREF3107_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09430 KV790823.1 Protein Homology CDS 168067 168876 . + 0 ID=cds-OFS99669.1;Parent=gene-HMPREF3107_09430;Dbxref=NCBI_GP:OFS99669.1;Name=OFS99669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425183.1;locus_tag=HMPREF3107_09430;product=serine acetyltransferase;protein_id=OFS99669.1;transl_table=11 KV790823.1 Genbank gene 169133 171163 . + . ID=gene-HMPREF3107_09435;Name=HMPREF3107_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09435 KV790823.1 GeneMarkS+ CDS 169133 171163 . + 0 ID=cds-OFS99668.1;Parent=gene-HMPREF3107_09435;Dbxref=NCBI_GP:OFS99668.1;Name=OFS99668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09435;product=hypothetical protein;protein_id=OFS99668.1;transl_table=11 ##sequence-region KV790824.1 1 37485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790824.1 Genbank region 1 37485 . + . ID=KV790824.1:1..37485;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790824.1 Genbank gene 167 3418 . + . ID=gene-HMPREF3107_09440;Name=HMPREF3107_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09440 KV790824.1 GeneMarkS+ CDS 167 3418 . + 0 ID=cds-OFS99596.1;Parent=gene-HMPREF3107_09440;Dbxref=NCBI_GP:OFS99596.1;Name=OFS99596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09440;product=hypothetical protein;protein_id=OFS99596.1;transl_table=11 KV790824.1 Genbank gene 3415 4200 . + . ID=gene-HMPREF3107_09445;Name=HMPREF3107_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09445 KV790824.1 Protein Homology CDS 3415 4200 . + 0 ID=cds-OFS99597.1;Parent=gene-HMPREF3107_09445;Dbxref=NCBI_GP:OFS99597.1;Name=OFS99597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771242.1;locus_tag=HMPREF3107_09445;product=hydroxyacylglutathione hydrolase;protein_id=OFS99597.1;transl_table=11 KV790824.1 Genbank gene 4343 5938 . + . ID=gene-HMPREF3107_09450;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=HMPREF3107_09450 KV790824.1 Protein Homology CDS 4343 5938 . + 0 ID=cds-OFS99598.1;Parent=gene-HMPREF3107_09450;Dbxref=NCBI_GP:OFS99598.1;Name=OFS99598.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342770.1;locus_tag=HMPREF3107_09450;product=peptide chain release factor 3;protein_id=OFS99598.1;transl_table=11 KV790824.1 Genbank gene 6041 6562 . + . ID=gene-HMPREF3107_09455;Name=HMPREF3107_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09455 KV790824.1 Protein Homology CDS 6041 6562 . + 0 ID=cds-OFS99599.1;Parent=gene-HMPREF3107_09455;Dbxref=NCBI_GP:OFS99599.1;Name=OFS99599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771247.1;locus_tag=HMPREF3107_09455;product=hypothetical protein;protein_id=OFS99599.1;transl_table=11 KV790824.1 Genbank gene 6597 6827 . - . ID=gene-HMPREF3107_09460;Name=HMPREF3107_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09460 KV790824.1 GeneMarkS+ CDS 6597 6827 . - 0 ID=cds-OFS99600.1;Parent=gene-HMPREF3107_09460;Dbxref=NCBI_GP:OFS99600.1;Name=OFS99600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09460;product=hypothetical protein;protein_id=OFS99600.1;transl_table=11 KV790824.1 Genbank gene 7035 7274 . - . ID=gene-HMPREF3107_09465;Name=HMPREF3107_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09465 KV790824.1 GeneMarkS+ CDS 7035 7274 . - 0 ID=cds-OFS99601.1;Parent=gene-HMPREF3107_09465;Dbxref=NCBI_GP:OFS99601.1;Name=OFS99601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09465;product=hypothetical protein;protein_id=OFS99601.1;transl_table=11 KV790824.1 Genbank pseudogene 7708 7845 . - . ID=gene-HMPREF3107_09470;Name=HMPREF3107_09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_09470;pseudo=true KV790824.1 Protein Homology CDS 7708 7845 . - 0 ID=cds-HMPREF3107_09470;Parent=gene-HMPREF3107_09470;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744189.1;locus_tag=HMPREF3107_09470;product=integrase;pseudo=true;transl_table=11 KV790824.1 Genbank gene 8065 8150 . - . ID=gene-HMPREF3107_09475;Name=HMPREF3107_09475;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_09475 KV790824.1 tRNAscan-SE tRNA 8065 8150 . - . ID=rna-HMPREF3107_09475;Parent=gene-HMPREF3107_09475;anticodon=(pos:complement(8114..8116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_09475;product=tRNA-Leu KV790824.1 tRNAscan-SE exon 8065 8150 . - . ID=exon-HMPREF3107_09475-1;Parent=rna-HMPREF3107_09475;anticodon=(pos:complement(8114..8116));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_09475;product=tRNA-Leu KV790824.1 Genbank gene 8516 9271 . - . ID=gene-HMPREF3107_09480;Name=HMPREF3107_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09480 KV790824.1 Protein Homology CDS 8516 9271 . - 0 ID=cds-OFS99602.1;Parent=gene-HMPREF3107_09480;Dbxref=NCBI_GP:OFS99602.1;Name=OFS99602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117363.1;locus_tag=HMPREF3107_09480;product=triose-phosphate isomerase;protein_id=OFS99602.1;transl_table=11 KV790824.1 Genbank gene 9346 10215 . - . ID=gene-HMPREF3107_09485;Name=HMPREF3107_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09485 KV790824.1 Protein Homology CDS 9346 10215 . - 0 ID=cds-OFS99603.1;Parent=gene-HMPREF3107_09485;Dbxref=NCBI_GP:OFS99603.1;Name=OFS99603.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741426.1;locus_tag=HMPREF3107_09485;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=OFS99603.1;transl_table=11 KV790824.1 Genbank gene 10335 10706 . + . ID=gene-HMPREF3107_09490;Name=HMPREF3107_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09490 KV790824.1 Protein Homology CDS 10335 10706 . + 0 ID=cds-OFS99604.1;Parent=gene-HMPREF3107_09490;Dbxref=NCBI_GP:OFS99604.1;Name=OFS99604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273043.1;locus_tag=HMPREF3107_09490;product=ribosome-binding factor A;protein_id=OFS99604.1;transl_table=11 KV790824.1 Genbank gene 10708 11238 . + . ID=gene-HMPREF3107_09495;Name=HMPREF3107_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09495 KV790824.1 Protein Homology CDS 10708 11238 . + 0 ID=cds-OFS99605.1;Parent=gene-HMPREF3107_09495;Dbxref=NCBI_GP:OFS99605.1;Name=OFS99605.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425793.1;locus_tag=HMPREF3107_09495;product=hypothetical protein;protein_id=OFS99605.1;transl_table=11 KV790824.1 Genbank gene 11346 12260 . + . ID=gene-HMPREF3107_09500;Name=HMPREF3107_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09500 KV790824.1 Protein Homology CDS 11346 12260 . + 0 ID=cds-OFS99606.1;Parent=gene-HMPREF3107_09500;Dbxref=NCBI_GP:OFS99606.1;Name=OFS99606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687563.1;locus_tag=HMPREF3107_09500;product=tRNA pseudouridine(55) synthase TruB;protein_id=OFS99606.1;transl_table=11 KV790824.1 Genbank gene 12478 12747 . + . ID=gene-HMPREF3107_09505;Name=HMPREF3107_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09505 KV790824.1 Protein Homology CDS 12478 12747 . + 0 ID=cds-OFS99607.1;Parent=gene-HMPREF3107_09505;Dbxref=NCBI_GP:OFS99607.1;Name=OFS99607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958878.1;locus_tag=HMPREF3107_09505;product=30S ribosomal protein S15;protein_id=OFS99607.1;transl_table=11 KV790824.1 Genbank gene 12920 14443 . - . ID=gene-HMPREF3107_09510;Name=HMPREF3107_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09510 KV790824.1 Protein Homology CDS 12920 14443 . - 0 ID=cds-OFS99608.1;Parent=gene-HMPREF3107_09510;Dbxref=NCBI_GP:OFS99608.1;Name=OFS99608.1;Note=catalyzes the formation of fumarate from malate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427360.1;locus_tag=HMPREF3107_09510;product=fumarate hydratase;protein_id=OFS99608.1;transl_table=11 KV790824.1 Genbank gene 14623 15285 . + . ID=gene-HMPREF3107_09515;Name=HMPREF3107_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09515 KV790824.1 Protein Homology CDS 14623 15285 . + 0 ID=cds-OFS99609.1;Parent=gene-HMPREF3107_09515;Dbxref=NCBI_GP:OFS99609.1;Name=OFS99609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011608931.1;locus_tag=HMPREF3107_09515;product=NAD(P)H-dependent oxidoreductase;protein_id=OFS99609.1;transl_table=11 KV790824.1 Genbank gene 15321 15818 . + . ID=gene-HMPREF3107_09520;Name=HMPREF3107_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09520 KV790824.1 GeneMarkS+ CDS 15321 15818 . + 0 ID=cds-OFS99610.1;Parent=gene-HMPREF3107_09520;Dbxref=NCBI_GP:OFS99610.1;Name=OFS99610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09520;product=hypothetical protein;protein_id=OFS99610.1;transl_table=11 KV790824.1 Genbank gene 16125 16697 . - . ID=gene-HMPREF3107_09525;Name=HMPREF3107_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09525 KV790824.1 Protein Homology CDS 16125 16697 . - 0 ID=cds-OFS99611.1;Parent=gene-HMPREF3107_09525;Dbxref=NCBI_GP:OFS99611.1;Name=OFS99611.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003791003.1;locus_tag=HMPREF3107_09525;product=aminoacyl-tRNA hydrolase;protein_id=OFS99611.1;transl_table=11 KV790824.1 Genbank gene 16705 16995 . - . ID=gene-HMPREF3107_09530;Name=HMPREF3107_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09530 KV790824.1 Protein Homology CDS 16705 16995 . - 0 ID=cds-OFS99612.1;Parent=gene-HMPREF3107_09530;Dbxref=NCBI_GP:OFS99612.1;Name=OFS99612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775511.1;locus_tag=HMPREF3107_09530;product=RnfH family protein;protein_id=OFS99612.1;transl_table=11 KV790824.1 Genbank gene 16988 17419 . - . ID=gene-HMPREF3107_09535;Name=HMPREF3107_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09535 KV790824.1 Protein Homology CDS 16988 17419 . - 0 ID=cds-OFS99613.1;Parent=gene-HMPREF3107_09535;Dbxref=NCBI_GP:OFS99613.1;Name=OFS99613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775509.1;locus_tag=HMPREF3107_09535;product=ubiquinone-binding protein;protein_id=OFS99613.1;transl_table=11 KV790824.1 Genbank gene 17533 18579 . - . ID=gene-HMPREF3107_09540;Name=HMPREF3107_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09540 KV790824.1 Protein Homology CDS 17533 18579 . - 0 ID=cds-OFS99614.1;Parent=gene-HMPREF3107_09540;Dbxref=NCBI_GP:OFS99614.1;Name=OFS99614.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775505.1;locus_tag=HMPREF3107_09540;product=microcin ABC transporter permease;protein_id=OFS99614.1;transl_table=11 KV790824.1 Genbank gene 18608 18811 . - . ID=gene-HMPREF3107_09545;Name=HMPREF3107_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09545 KV790824.1 Protein Homology CDS 18608 18811 . - 0 ID=cds-OFS99615.1;Parent=gene-HMPREF3107_09545;Dbxref=NCBI_GP:OFS99615.1;Name=OFS99615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775499.1;locus_tag=HMPREF3107_09545;product=hypothetical protein;protein_id=OFS99615.1;transl_table=11 KV790824.1 Genbank gene 18944 20113 . - . ID=gene-HMPREF3107_09550;Name=HMPREF3107_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09550 KV790824.1 Protein Homology CDS 18944 20113 . - 0 ID=cds-OFS99616.1;Parent=gene-HMPREF3107_09550;Dbxref=NCBI_GP:OFS99616.1;Name=OFS99616.1;Note=catalyzes the conversion of O-succinylhomoserine into homocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284655.1;locus_tag=HMPREF3107_09550;product=O-succinylhomoserine sulfhydrylase;protein_id=OFS99616.1;transl_table=11 KV790824.1 Genbank gene 20249 20926 . - . ID=gene-HMPREF3107_09555;Name=HMPREF3107_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09555 KV790824.1 Protein Homology CDS 20249 20926 . - 0 ID=cds-OFS99617.1;Parent=gene-HMPREF3107_09555;Dbxref=NCBI_GP:OFS99617.1;Name=OFS99617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760685.1;locus_tag=HMPREF3107_09555;product=lipoprotein ABC transporter ATP-binding protein;protein_id=OFS99617.1;transl_table=11 KV790824.1 Genbank gene 20919 22169 . - . ID=gene-HMPREF3107_09560;Name=HMPREF3107_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09560 KV790824.1 Protein Homology CDS 20919 22169 . - 0 ID=cds-OFS99631.1;Parent=gene-HMPREF3107_09560;Dbxref=NCBI_GP:OFS99631.1;Name=OFS99631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220969.1;locus_tag=HMPREF3107_09560;product=permease;protein_id=OFS99631.1;transl_table=11 KV790824.1 Genbank gene 22337 23272 . + . ID=gene-HMPREF3107_09565;Name=HMPREF3107_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09565 KV790824.1 Protein Homology CDS 22337 23272 . + 0 ID=cds-OFS99618.1;Parent=gene-HMPREF3107_09565;Dbxref=NCBI_GP:OFS99618.1;Name=OFS99618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239108.1;locus_tag=HMPREF3107_09565;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=OFS99618.1;transl_table=11 KV790824.1 Genbank gene 23449 24237 . - . ID=gene-HMPREF3107_09570;Name=HMPREF3107_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09570 KV790824.1 Protein Homology CDS 23449 24237 . - 0 ID=cds-OFS99619.1;Parent=gene-HMPREF3107_09570;Dbxref=NCBI_GP:OFS99619.1;Name=OFS99619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775484.1;locus_tag=HMPREF3107_09570;product=RNA methyltransferase;protein_id=OFS99619.1;transl_table=11 KV790824.1 Genbank gene 24524 25801 . - . ID=gene-HMPREF3107_09575;Name=HMPREF3107_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09575 KV790824.1 Protein Homology CDS 24524 25801 . - 0 ID=cds-OFS99620.1;Parent=gene-HMPREF3107_09575;Dbxref=NCBI_GP:OFS99620.1;Name=OFS99620.1;Note=catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270949.1;locus_tag=HMPREF3107_09575;product=O-acetylhomoserine aminocarboxypropyltransferase;protein_id=OFS99620.1;transl_table=11 KV790824.1 Genbank gene 25890 28655 . - . ID=gene-HMPREF3107_09580;Name=HMPREF3107_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09580 KV790824.1 Protein Homology CDS 25890 28655 . - 0 ID=cds-OFS99621.1;Parent=gene-HMPREF3107_09580;Dbxref=NCBI_GP:OFS99621.1;Name=OFS99621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743227.1;locus_tag=HMPREF3107_09580;product=DNA gyrase subunit A;protein_id=OFS99621.1;transl_table=11 KV790824.1 Genbank gene 29184 29399 . + . ID=gene-HMPREF3107_09585;Name=HMPREF3107_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09585 KV790824.1 Protein Homology CDS 29184 29399 . + 0 ID=cds-OFS99622.1;Parent=gene-HMPREF3107_09585;Dbxref=NCBI_GP:OFS99622.1;Name=OFS99622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746339.1;locus_tag=HMPREF3107_09585;product=hypothetical protein;protein_id=OFS99622.1;transl_table=11 KV790824.1 Genbank gene 29473 29796 . + . ID=gene-HMPREF3107_09590;Name=HMPREF3107_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09590 KV790824.1 Protein Homology CDS 29473 29796 . + 0 ID=cds-OFS99632.1;Parent=gene-HMPREF3107_09590;Dbxref=NCBI_GP:OFS99632.1;Name=OFS99632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775470.1;locus_tag=HMPREF3107_09590;product=protein tyrosine phosphatase;protein_id=OFS99632.1;transl_table=11 KV790824.1 Genbank gene 29889 30428 . - . ID=gene-HMPREF3107_09595;Name=HMPREF3107_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09595 KV790824.1 Protein Homology CDS 29889 30428 . - 0 ID=cds-OFS99633.1;Parent=gene-HMPREF3107_09595;Dbxref=NCBI_GP:OFS99633.1;Name=OFS99633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777705.1;locus_tag=HMPREF3107_09595;product=hypothetical protein;protein_id=OFS99633.1;transl_table=11 KV790824.1 Genbank gene 30516 31481 . - . ID=gene-HMPREF3107_09600;Name=HMPREF3107_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09600 KV790824.1 Protein Homology CDS 30516 31481 . - 0 ID=cds-OFS99623.1;Parent=gene-HMPREF3107_09600;Dbxref=NCBI_GP:OFS99623.1;Name=OFS99623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775466.1;locus_tag=HMPREF3107_09600;product=phosphate starvation-inducible protein PhoH;protein_id=OFS99623.1;transl_table=11 KV790824.1 Genbank gene 31659 32156 . + . ID=gene-HMPREF3107_09605;Name=HMPREF3107_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09605 KV790824.1 Protein Homology CDS 31659 32156 . + 0 ID=cds-OFS99624.1;Parent=gene-HMPREF3107_09605;Dbxref=NCBI_GP:OFS99624.1;Name=OFS99624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775464.1;locus_tag=HMPREF3107_09605;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=OFS99624.1;transl_table=11 KV790824.1 Genbank gene 32268 32918 . + . ID=gene-HMPREF3107_09610;Name=HMPREF3107_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09610 KV790824.1 Protein Homology CDS 32268 32918 . + 0 ID=cds-OFS99625.1;Parent=gene-HMPREF3107_09610;Dbxref=NCBI_GP:OFS99625.1;Name=OFS99625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284344.1;locus_tag=HMPREF3107_09610;product=deoxyguanosine kinase;protein_id=OFS99625.1;transl_table=11 KV790824.1 Genbank gene 32925 33713 . + . ID=gene-HMPREF3107_09615;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HMPREF3107_09615 KV790824.1 Protein Homology CDS 32925 33713 . + 0 ID=cds-OFS99626.1;Parent=gene-HMPREF3107_09615;Dbxref=NCBI_GP:OFS99626.1;Name=OFS99626.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZW6.1;locus_tag=HMPREF3107_09615;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=OFS99626.1;transl_table=11 KV790824.1 Genbank gene 33777 34598 . + . ID=gene-HMPREF3107_09620;Name=HMPREF3107_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09620 KV790824.1 Protein Homology CDS 33777 34598 . + 0 ID=cds-OFS99627.1;Parent=gene-HMPREF3107_09620;Dbxref=NCBI_GP:OFS99627.1;Name=OFS99627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775458.1;locus_tag=HMPREF3107_09620;product=DNA-formamidopyrimidine glycosylase;protein_id=OFS99627.1;transl_table=11 KV790824.1 Genbank gene 34694 35083 . - . ID=gene-HMPREF3107_09625;Name=HMPREF3107_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09625 KV790824.1 Protein Homology CDS 34694 35083 . - 0 ID=cds-OFS99628.1;Parent=gene-HMPREF3107_09625;Dbxref=NCBI_GP:OFS99628.1;Name=OFS99628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754044.1;locus_tag=HMPREF3107_09625;product=reactive intermediate/imine deaminase;protein_id=OFS99628.1;transl_table=11 KV790824.1 Genbank gene 35466 36287 . + . ID=gene-HMPREF3107_09630;Name=HMPREF3107_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09630 KV790824.1 Protein Homology CDS 35466 36287 . + 0 ID=cds-OFS99629.1;Parent=gene-HMPREF3107_09630;Dbxref=NCBI_GP:OFS99629.1;Name=OFS99629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343164.1;locus_tag=HMPREF3107_09630;product=citryl-CoA lyase;protein_id=OFS99629.1;transl_table=11 KV790824.1 Genbank gene 36326 36529 . - . ID=gene-HMPREF3107_09635;Name=HMPREF3107_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09635 KV790824.1 Protein Homology CDS 36326 36529 . - 0 ID=cds-OFS99630.1;Parent=gene-HMPREF3107_09635;Dbxref=NCBI_GP:OFS99630.1;Name=OFS99630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767519.1;locus_tag=HMPREF3107_09635;product=hypothetical protein;protein_id=OFS99630.1;transl_table=11 ##sequence-region KV790825.1 1 11414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790825.1 Genbank region 1 11414 . + . ID=KV790825.1:1..11414;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790825.1 Genbank gene 131 493 . + . ID=gene-HMPREF3107_09640;Name=HMPREF3107_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09640 KV790825.1 Protein Homology CDS 131 493 . + 0 ID=cds-OFS99552.1;Parent=gene-HMPREF3107_09640;Dbxref=NCBI_GP:OFS99552.1;Name=OFS99552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675349.1;locus_tag=HMPREF3107_09640;product=hypothetical protein;protein_id=OFS99552.1;transl_table=11 KV790825.1 Genbank gene 571 912 . + . ID=gene-HMPREF3107_09645;Name=HMPREF3107_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09645 KV790825.1 Protein Homology CDS 571 912 . + 0 ID=cds-OFS99553.1;Parent=gene-HMPREF3107_09645;Dbxref=NCBI_GP:OFS99553.1;Name=OFS99553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008952562.1;locus_tag=HMPREF3107_09645;product=2Fe-2S ferredoxin;protein_id=OFS99553.1;transl_table=11 KV790825.1 Genbank gene 1127 1324 . + . ID=gene-HMPREF3107_09650;Name=HMPREF3107_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09650 KV790825.1 Protein Homology CDS 1127 1324 . + 0 ID=cds-OFS99554.1;Parent=gene-HMPREF3107_09650;Dbxref=NCBI_GP:OFS99554.1;Name=OFS99554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742471.1;locus_tag=HMPREF3107_09650;product=Fe-S assembly protein IscX;protein_id=OFS99554.1;transl_table=11 KV790825.1 Genbank gene 1416 2795 . + . ID=gene-HMPREF3107_09655;Name=HMPREF3107_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09655 KV790825.1 Protein Homology CDS 1416 2795 . + 0 ID=cds-OFS99555.1;Parent=gene-HMPREF3107_09655;Dbxref=NCBI_GP:OFS99555.1;Name=OFS99555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770427.1;locus_tag=HMPREF3107_09655;product=multidrug efflux MATE transporter NorM;protein_id=OFS99555.1;transl_table=11 KV790825.1 Genbank gene 2792 3814 . + . ID=gene-HMPREF3107_09660;Name=HMPREF3107_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09660 KV790825.1 Protein Homology CDS 2792 3814 . + 0 ID=cds-OFS99556.1;Parent=gene-HMPREF3107_09660;Dbxref=NCBI_GP:OFS99556.1;Name=OFS99556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271933.1;locus_tag=HMPREF3107_09660;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=OFS99556.1;transl_table=11 KV790825.1 Genbank gene 3983 4345 . - . ID=gene-HMPREF3107_09665;Name=HMPREF3107_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09665 KV790825.1 Protein Homology CDS 3983 4345 . - 0 ID=cds-OFS99563.1;Parent=gene-HMPREF3107_09665;Dbxref=NCBI_GP:OFS99563.1;Name=OFS99563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755076.1;locus_tag=HMPREF3107_09665;product=adhesin;protein_id=OFS99563.1;transl_table=11 KV790825.1 Genbank gene 4666 5451 . + . ID=gene-HMPREF3107_09670;Name=HMPREF3107_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09670 KV790825.1 GeneMarkS+ CDS 4666 5451 . + 0 ID=cds-OFS99557.1;Parent=gene-HMPREF3107_09670;Dbxref=NCBI_GP:OFS99557.1;Name=OFS99557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09670;product=hypothetical protein;protein_id=OFS99557.1;transl_table=11 KV790825.1 Genbank gene 6109 7674 . + . ID=gene-HMPREF3107_09675;Name=HMPREF3107_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09675 KV790825.1 Protein Homology CDS 6109 7674 . + 0 ID=cds-OFS99558.1;Parent=gene-HMPREF3107_09675;Dbxref=NCBI_GP:OFS99558.1;Name=OFS99558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312277.1;locus_tag=HMPREF3107_09675;product=protein phosphatase;protein_id=OFS99558.1;transl_table=11 KV790825.1 Genbank gene 7671 8492 . + . ID=gene-HMPREF3107_09680;Name=HMPREF3107_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09680 KV790825.1 Protein Homology CDS 7671 8492 . + 0 ID=cds-OFS99559.1;Parent=gene-HMPREF3107_09680;Dbxref=NCBI_GP:OFS99559.1;Name=OFS99559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312276.1;locus_tag=HMPREF3107_09680;product=CAAX protease;protein_id=OFS99559.1;transl_table=11 KV790825.1 Genbank gene 8560 8934 . + . ID=gene-HMPREF3107_09685;Name=HMPREF3107_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09685 KV790825.1 Protein Homology CDS 8560 8934 . + 0 ID=cds-OFS99560.1;Parent=gene-HMPREF3107_09685;Dbxref=NCBI_GP:OFS99560.1;Name=OFS99560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684411.1;locus_tag=HMPREF3107_09685;product=hypothetical protein;protein_id=OFS99560.1;transl_table=11 KV790825.1 Genbank pseudogene 9346 9864 . - . ID=gene-HMPREF3107_09690;Name=HMPREF3107_09690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_09690;pseudo=true KV790825.1 Protein Homology CDS 9346 9864 . - 0 ID=cds-HMPREF3107_09690;Parent=gene-HMPREF3107_09690;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002246337.1;locus_tag=HMPREF3107_09690;product=hypothetical protein;pseudo=true;transl_table=11 KV790825.1 Genbank gene 9961 10203 . - . ID=gene-HMPREF3107_09695;Name=HMPREF3107_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09695 KV790825.1 Protein Homology CDS 9961 10203 . - 0 ID=cds-OFS99561.1;Parent=gene-HMPREF3107_09695;Dbxref=NCBI_GP:OFS99561.1;Name=OFS99561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015964932.1;locus_tag=HMPREF3107_09695;product=transcriptional regulator;protein_id=OFS99561.1;transl_table=11 KV790825.1 Genbank gene 10438 11145 . + . ID=gene-HMPREF3107_09700;Name=HMPREF3107_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09700 KV790825.1 Protein Homology CDS 10438 11145 . + 0 ID=cds-OFS99562.1;Parent=gene-HMPREF3107_09700;Dbxref=NCBI_GP:OFS99562.1;Name=OFS99562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173203.1;locus_tag=HMPREF3107_09700;product=repressor;protein_id=OFS99562.1;transl_table=11 ##sequence-region KV790826.1 1 30667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790826.1 Genbank region 1 30667 . + . ID=KV790826.1:1..30667;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790826.1 Genbank gene 67 1542 . - . ID=gene-HMPREF3107_09705;Name=HMPREF3107_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09705 KV790826.1 Protein Homology CDS 67 1542 . - 0 ID=cds-OFS99543.1;Parent=gene-HMPREF3107_09705;Dbxref=NCBI_GP:OFS99543.1;Name=OFS99543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173274.1;locus_tag=HMPREF3107_09705;product=aldehyde dehydrogenase;protein_id=OFS99543.1;transl_table=11 KV790826.1 Genbank gene 1909 2943 . + . ID=gene-HMPREF3107_09710;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=HMPREF3107_09710 KV790826.1 Protein Homology CDS 1909 2943 . + 0 ID=cds-OFS99544.1;Parent=gene-HMPREF3107_09710;Dbxref=NCBI_GP:OFS99544.1;Name=OFS99544.1;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adhP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018499159.1;locus_tag=HMPREF3107_09710;product=alcohol dehydrogenase AdhP;protein_id=OFS99544.1;transl_table=11 KV790826.1 Genbank gene 3273 4322 . + . ID=gene-HMPREF3107_09715;Name=HMPREF3107_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09715 KV790826.1 Protein Homology CDS 3273 4322 . + 0 ID=cds-OFS99520.1;Parent=gene-HMPREF3107_09715;Dbxref=NCBI_GP:OFS99520.1;Name=OFS99520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116943.1;locus_tag=HMPREF3107_09715;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=OFS99520.1;transl_table=11 KV790826.1 Genbank gene 4385 4858 . - . ID=gene-HMPREF3107_09720;Name=HMPREF3107_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09720 KV790826.1 Protein Homology CDS 4385 4858 . - 0 ID=cds-OFS99521.1;Parent=gene-HMPREF3107_09720;Dbxref=NCBI_GP:OFS99521.1;Name=OFS99521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015674152.1;locus_tag=HMPREF3107_09720;product=preprotein translocase subunit SecA;protein_id=OFS99521.1;transl_table=11 KV790826.1 Genbank gene 4951 5901 . + . ID=gene-HMPREF3107_09725;Name=HMPREF3107_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09725 KV790826.1 Protein Homology CDS 4951 5901 . + 0 ID=cds-OFS99522.1;Parent=gene-HMPREF3107_09725;Dbxref=NCBI_GP:OFS99522.1;Name=OFS99522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775277.1;locus_tag=HMPREF3107_09725;product=glutathione synthase;protein_id=OFS99522.1;transl_table=11 KV790826.1 Genbank gene 5954 6367 . + . ID=gene-HMPREF3107_09730;Name=HMPREF3107_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09730 KV790826.1 Protein Homology CDS 5954 6367 . + 0 ID=cds-OFS99523.1;Parent=gene-HMPREF3107_09730;Dbxref=NCBI_GP:OFS99523.1;Name=OFS99523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775279.1;locus_tag=HMPREF3107_09730;product=diacylglycerol kinase;protein_id=OFS99523.1;transl_table=11 KV790826.1 Genbank gene 6496 7011 . + . ID=gene-HMPREF3107_09735;Name=HMPREF3107_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09735 KV790826.1 Protein Homology CDS 6496 7011 . + 0 ID=cds-OFS99524.1;Parent=gene-HMPREF3107_09735;Dbxref=NCBI_GP:OFS99524.1;Name=OFS99524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775281.1;locus_tag=HMPREF3107_09735;product=hypothetical protein;protein_id=OFS99524.1;transl_table=11 KV790826.1 Genbank gene 7266 7823 . + . ID=gene-HMPREF3107_09740;Name=HMPREF3107_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09740 KV790826.1 Protein Homology CDS 7266 7823 . + 0 ID=cds-OFS99525.1;Parent=gene-HMPREF3107_09740;Dbxref=NCBI_GP:OFS99525.1;Name=OFS99525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389871.1;locus_tag=HMPREF3107_09740;product=ribosome recycling factor;protein_id=OFS99525.1;transl_table=11 KV790826.1 Genbank gene 7883 8629 . + . ID=gene-HMPREF3107_09745;Name=HMPREF3107_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09745 KV790826.1 Protein Homology CDS 7883 8629 . + 0 ID=cds-OFS99526.1;Parent=gene-HMPREF3107_09745;Dbxref=NCBI_GP:OFS99526.1;Name=OFS99526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675954.1;locus_tag=HMPREF3107_09745;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=OFS99526.1;transl_table=11 KV790826.1 Genbank gene 8633 9430 . + . ID=gene-HMPREF3107_09750;Name=HMPREF3107_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09750 KV790826.1 Protein Homology CDS 8633 9430 . + 0 ID=cds-OFS99527.1;Parent=gene-HMPREF3107_09750;Dbxref=NCBI_GP:OFS99527.1;Name=OFS99527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581296.1;locus_tag=HMPREF3107_09750;product=phosphatidate cytidylyltransferase;protein_id=OFS99527.1;transl_table=11 KV790826.1 Genbank gene 9445 10197 . + . ID=gene-HMPREF3107_09755;Name=HMPREF3107_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09755 KV790826.1 Protein Homology CDS 9445 10197 . + 0 ID=cds-OFS99528.1;Parent=gene-HMPREF3107_09755;Dbxref=NCBI_GP:OFS99528.1;Name=OFS99528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747899.1;locus_tag=HMPREF3107_09755;product=hypothetical protein;protein_id=OFS99528.1;transl_table=11 KV790826.1 Genbank gene 10285 11472 . + . ID=gene-HMPREF3107_09760;Name=HMPREF3107_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09760 KV790826.1 Protein Homology CDS 10285 11472 . + 0 ID=cds-OFS99529.1;Parent=gene-HMPREF3107_09760;Dbxref=NCBI_GP:OFS99529.1;Name=OFS99529.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283153.1;locus_tag=HMPREF3107_09760;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=OFS99529.1;transl_table=11 KV790826.1 Genbank gene 11475 12812 . + . ID=gene-HMPREF3107_09765;Name=HMPREF3107_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09765 KV790826.1 Protein Homology CDS 11475 12812 . + 0 ID=cds-OFS99545.1;Parent=gene-HMPREF3107_09765;Dbxref=NCBI_GP:OFS99545.1;Name=OFS99545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681697.1;locus_tag=HMPREF3107_09765;product=RIP metalloprotease RseP;protein_id=OFS99545.1;transl_table=11 KV790826.1 Genbank gene 12816 15218 . + . ID=gene-HMPREF3107_09770;Name=HMPREF3107_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09770 KV790826.1 Protein Homology CDS 12816 15218 . + 0 ID=cds-OFS99530.1;Parent=gene-HMPREF3107_09770;Dbxref=NCBI_GP:OFS99530.1;Name=OFS99530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270788.1;locus_tag=HMPREF3107_09770;product=outer membrane protein assembly factor BamA;protein_id=OFS99530.1;transl_table=11 KV790826.1 Genbank gene 15240 15743 . + . ID=gene-HMPREF3107_09775;Name=HMPREF3107_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09775 KV790826.1 Protein Homology CDS 15240 15743 . + 0 ID=cds-OFS99531.1;Parent=gene-HMPREF3107_09775;Dbxref=NCBI_GP:OFS99531.1;Name=OFS99531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775300.1;locus_tag=HMPREF3107_09775;product=hypothetical protein;protein_id=OFS99531.1;transl_table=11 KV790826.1 Genbank gene 15824 16867 . + . ID=gene-HMPREF3107_09780;Name=HMPREF3107_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09780 KV790826.1 Protein Homology CDS 15824 16867 . + 0 ID=cds-OFS99532.1;Parent=gene-HMPREF3107_09780;Dbxref=NCBI_GP:OFS99532.1;Name=OFS99532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RR13.1;locus_tag=HMPREF3107_09780;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=OFS99532.1;transl_table=11 KV790826.1 Genbank gene 16945 17409 . + . ID=gene-HMPREF3107_09785;Name=HMPREF3107_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09785 KV790826.1 Protein Homology CDS 16945 17409 . + 0 ID=cds-OFS99533.1;Parent=gene-HMPREF3107_09785;Dbxref=NCBI_GP:OFS99533.1;Name=OFS99533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174964.1;locus_tag=HMPREF3107_09785;product=3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;protein_id=OFS99533.1;transl_table=11 KV790826.1 Genbank gene 17522 18298 . + . ID=gene-HMPREF3107_09790;Name=HMPREF3107_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09790 KV790826.1 Protein Homology CDS 17522 18298 . + 0 ID=cds-OFS99534.1;Parent=gene-HMPREF3107_09790;Dbxref=NCBI_GP:OFS99534.1;Name=OFS99534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235376.1;locus_tag=HMPREF3107_09790;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=OFS99534.1;transl_table=11 KV790826.1 Genbank gene 18448 19260 . + . ID=gene-HMPREF3107_09795;Name=HMPREF3107_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09795 KV790826.1 Protein Homology CDS 18448 19260 . + 0 ID=cds-OFS99535.1;Parent=gene-HMPREF3107_09795;Dbxref=NCBI_GP:OFS99535.1;Name=OFS99535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013397522.1;locus_tag=HMPREF3107_09795;product=methyltransferase;protein_id=OFS99535.1;transl_table=11 KV790826.1 Genbank gene 19484 20809 . + . ID=gene-HMPREF3107_09800;Name=HMPREF3107_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09800 KV790826.1 Protein Homology CDS 19484 20809 . + 0 ID=cds-OFS99546.1;Parent=gene-HMPREF3107_09800;Dbxref=NCBI_GP:OFS99546.1;Name=OFS99546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520672.1;locus_tag=HMPREF3107_09800;product=hypothetical protein;protein_id=OFS99546.1;transl_table=11 KV790826.1 Genbank gene 20900 21382 . - . ID=gene-HMPREF3107_09805;Name=HMPREF3107_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09805 KV790826.1 Protein Homology CDS 20900 21382 . - 0 ID=cds-OFS99547.1;Parent=gene-HMPREF3107_09805;Dbxref=NCBI_GP:OFS99547.1;Name=OFS99547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285012.1;locus_tag=HMPREF3107_09805;product=aminoacyl-tRNA deacylase;protein_id=OFS99547.1;transl_table=11 KV790826.1 Genbank gene 21524 22906 . + . ID=gene-HMPREF3107_09810;Name=HMPREF3107_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09810 KV790826.1 Protein Homology CDS 21524 22906 . + 0 ID=cds-OFS99536.1;Parent=gene-HMPREF3107_09810;Dbxref=NCBI_GP:OFS99536.1;Name=OFS99536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775316.1;locus_tag=HMPREF3107_09810;product=transporter;protein_id=OFS99536.1;transl_table=11 KV790826.1 Genbank gene 23041 23559 . + . ID=gene-HMPREF3107_09815;Name=HMPREF3107_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09815 KV790826.1 GeneMarkS+ CDS 23041 23559 . + 0 ID=cds-OFS99537.1;Parent=gene-HMPREF3107_09815;Dbxref=NCBI_GP:OFS99537.1;Name=OFS99537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09815;product=hypothetical protein;protein_id=OFS99537.1;transl_table=11 KV790826.1 Genbank gene 23669 24985 . - . ID=gene-HMPREF3107_09820;Name=HMPREF3107_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09820 KV790826.1 Protein Homology CDS 23669 24985 . - 0 ID=cds-OFS99538.1;Parent=gene-HMPREF3107_09820;Dbxref=NCBI_GP:OFS99538.1;Name=OFS99538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775322.1;locus_tag=HMPREF3107_09820;product=sulfate adenylyltransferase;protein_id=OFS99538.1;transl_table=11 KV790826.1 Genbank gene 25131 26036 . - . ID=gene-HMPREF3107_09825;Name=HMPREF3107_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09825 KV790826.1 Protein Homology CDS 25131 26036 . - 0 ID=cds-OFS99539.1;Parent=gene-HMPREF3107_09825;Dbxref=NCBI_GP:OFS99539.1;Name=OFS99539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015431570.1;locus_tag=HMPREF3107_09825;product=phosphatidate cytidylyltransferase;protein_id=OFS99539.1;transl_table=11 KV790826.1 Genbank gene 26548 27390 . - . ID=gene-HMPREF3107_09830;Name=HMPREF3107_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09830 KV790826.1 GeneMarkS+ CDS 26548 27390 . - 0 ID=cds-OFS99540.1;Parent=gene-HMPREF3107_09830;Dbxref=NCBI_GP:OFS99540.1;Name=OFS99540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09830;product=hypothetical protein;protein_id=OFS99540.1;transl_table=11 KV790826.1 Genbank gene 27518 27790 . + . ID=gene-HMPREF3107_09835;Name=HMPREF3107_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09835 KV790826.1 GeneMarkS+ CDS 27518 27790 . + 0 ID=cds-OFS99541.1;Parent=gene-HMPREF3107_09835;Dbxref=NCBI_GP:OFS99541.1;Name=OFS99541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09835;product=hypothetical protein;protein_id=OFS99541.1;transl_table=11 KV790826.1 Genbank pseudogene 28075 28371 . + . ID=gene-HMPREF3107_09840;Name=HMPREF3107_09840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_09840;pseudo=true KV790826.1 Protein Homology CDS 28075 28371 . + 0 ID=cds-HMPREF3107_09840;Parent=gene-HMPREF3107_09840;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273012.1;locus_tag=HMPREF3107_09840;product=phage tail protein;pseudo=true;transl_table=11 KV790826.1 Genbank pseudogene 28382 28621 . + . ID=gene-HMPREF3107_09845;Name=HMPREF3107_09845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_09845;pseudo=true KV790826.1 Protein Homology CDS 28382 28621 . + 0 ID=cds-HMPREF3107_09845;Parent=gene-HMPREF3107_09845;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002223793.1;locus_tag=HMPREF3107_09845;product=phage tail protein;pseudo=true;transl_table=11 KV790826.1 Genbank gene 29435 29932 . + . ID=gene-HMPREF3107_09850;Name=HMPREF3107_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09850 KV790826.1 Protein Homology CDS 29435 29932 . + 0 ID=cds-OFS99548.1;Parent=gene-HMPREF3107_09850;Dbxref=NCBI_GP:OFS99548.1;Name=OFS99548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019390147.1;locus_tag=HMPREF3107_09850;product=hypothetical protein;protein_id=OFS99548.1;transl_table=11 KV790826.1 Genbank gene 29929 30420 . + . ID=gene-HMPREF3107_09855;Name=HMPREF3107_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09855 KV790826.1 Protein Homology CDS 29929 30420 . + 0 ID=cds-OFS99542.1;Parent=gene-HMPREF3107_09855;Dbxref=NCBI_GP:OFS99542.1;Name=OFS99542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272497.1;locus_tag=HMPREF3107_09855;product=enoyl-CoA hydratase;protein_id=OFS99542.1;transl_table=11 ##sequence-region KV790827.1 1 9292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790827.1 Genbank region 1 9292 . + . ID=KV790827.1:1..9292;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790827.1 Genbank gene 285 1157 . - . ID=gene-HMPREF3107_09860;Name=HMPREF3107_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09860 KV790827.1 Protein Homology CDS 285 1157 . - 0 ID=cds-OFS99429.1;Parent=gene-HMPREF3107_09860;Dbxref=NCBI_GP:OFS99429.1;Name=OFS99429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774232.1;locus_tag=HMPREF3107_09860;product=AAA family ATPase;protein_id=OFS99429.1;transl_table=11 KV790827.1 Genbank gene 1258 1671 . + . ID=gene-HMPREF3107_09865;Name=HMPREF3107_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09865 KV790827.1 Protein Homology CDS 1258 1671 . + 0 ID=cds-OFS99436.1;Parent=gene-HMPREF3107_09865;Dbxref=NCBI_GP:OFS99436.1;Name=OFS99436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759169.1;locus_tag=HMPREF3107_09865;product=hypothetical protein;protein_id=OFS99436.1;transl_table=11 KV790827.1 Genbank gene 1960 3003 . + . ID=gene-HMPREF3107_09870;Name=HMPREF3107_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09870 KV790827.1 Protein Homology CDS 1960 3003 . + 0 ID=cds-OFS99430.1;Parent=gene-HMPREF3107_09870;Dbxref=NCBI_GP:OFS99430.1;Name=OFS99430.1;Note=wtih MglAC is involved in the transport of beta-methylgalactoside;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774238.1;locus_tag=HMPREF3107_09870;product=methyl-galactoside ABC transporter substrate-binding protein;protein_id=OFS99430.1;transl_table=11 KV790827.1 Genbank gene 3209 4732 . + . ID=gene-HMPREF3107_09875;Name=HMPREF3107_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09875 KV790827.1 Protein Homology CDS 3209 4732 . + 0 ID=cds-OFS99431.1;Parent=gene-HMPREF3107_09875;Dbxref=NCBI_GP:OFS99431.1;Name=OFS99431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65UW1.1;locus_tag=HMPREF3107_09875;product=sugar ABC transporter ATP-binding protein;protein_id=OFS99431.1;transl_table=11 KV790827.1 Genbank gene 4798 5808 . + . ID=gene-HMPREF3107_09880;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=HMPREF3107_09880 KV790827.1 Protein Homology CDS 4798 5808 . + 0 ID=cds-OFS99432.1;Parent=gene-HMPREF3107_09880;Dbxref=NCBI_GP:OFS99432.1;Name=OFS99432.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355241.1;locus_tag=HMPREF3107_09880;product=beta-methylgalactoside transporter permease;protein_id=OFS99432.1;transl_table=11 KV790827.1 Genbank gene 6033 7283 . + . ID=gene-HMPREF3107_09885;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=HMPREF3107_09885 KV790827.1 Protein Homology CDS 6033 7283 . + 0 ID=cds-OFS99433.1;Parent=gene-HMPREF3107_09885;Dbxref=NCBI_GP:OFS99433.1;Name=OFS99433.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520001.1;locus_tag=HMPREF3107_09885;product=serine hydroxymethyltransferase;protein_id=OFS99433.1;transl_table=11 KV790827.1 Genbank gene 7397 8002 . + . ID=gene-HMPREF3107_09890;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF3107_09890 KV790827.1 Protein Homology CDS 7397 8002 . + 0 ID=cds-OFS99434.1;Parent=gene-HMPREF3107_09890;Dbxref=NCBI_GP:OFS99434.1;Name=OFS99434.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283348.1;locus_tag=HMPREF3107_09890;product=recombination protein RecR;protein_id=OFS99434.1;transl_table=11 KV790827.1 Genbank gene 8077 9078 . - . ID=gene-HMPREF3107_09895;Name=HMPREF3107_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09895 KV790827.1 Protein Homology CDS 8077 9078 . - 0 ID=cds-OFS99435.1;Parent=gene-HMPREF3107_09895;Dbxref=NCBI_GP:OFS99435.1;Name=OFS99435.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271236.1;locus_tag=HMPREF3107_09895;product=delta-aminolevulinic acid dehydratase;protein_id=OFS99435.1;transl_table=11 ##sequence-region KV790828.1 1 17829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790828.1 Genbank region 1 17829 . + . ID=KV790828.1:1..17829;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790828.1 Genbank pseudogene 1 321 . + . ID=gene-HMPREF3107_09900;Name=HMPREF3107_09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_09900;pseudo=true KV790828.1 GeneMarkS+ CDS 1 321 . + 0 ID=cds-HMPREF3107_09900;Parent=gene-HMPREF3107_09900;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09900;product=hypothetical protein;pseudo=true;transl_table=11 KV790828.1 Genbank gene 368 631 . + . ID=gene-HMPREF3107_09905;Name=HMPREF3107_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09905 KV790828.1 GeneMarkS+ CDS 368 631 . + 0 ID=cds-OFS99384.1;Parent=gene-HMPREF3107_09905;Dbxref=NCBI_GP:OFS99384.1;Name=OFS99384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_09905;product=hypothetical protein;protein_id=OFS99384.1;transl_table=11 KV790828.1 Genbank gene 806 1294 . - . ID=gene-HMPREF3107_09910;Name=HMPREF3107_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09910 KV790828.1 Protein Homology CDS 806 1294 . - 0 ID=cds-OFS99385.1;Parent=gene-HMPREF3107_09910;Dbxref=NCBI_GP:OFS99385.1;Name=OFS99385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781518.1;locus_tag=HMPREF3107_09910;product=cytochrome B;protein_id=OFS99385.1;transl_table=11 KV790828.1 Genbank gene 1275 1484 . - . ID=gene-HMPREF3107_09915;Name=HMPREF3107_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09915 KV790828.1 Protein Homology CDS 1275 1484 . - 0 ID=cds-OFS99406.1;Parent=gene-HMPREF3107_09915;Dbxref=NCBI_GP:OFS99406.1;Name=OFS99406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343705.1;locus_tag=HMPREF3107_09915;product=transcriptional regulator;protein_id=OFS99406.1;transl_table=11 KV790828.1 Genbank gene 1541 1843 . + . ID=gene-HMPREF3107_09920;Name=HMPREF3107_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09920 KV790828.1 Protein Homology CDS 1541 1843 . + 0 ID=cds-OFS99386.1;Parent=gene-HMPREF3107_09920;Dbxref=NCBI_GP:OFS99386.1;Name=OFS99386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774562.1;locus_tag=HMPREF3107_09920;product=hypothetical protein;protein_id=OFS99386.1;transl_table=11 KV790828.1 Genbank gene 2126 2635 . + . ID=gene-HMPREF3107_09925;Name=HMPREF3107_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09925 KV790828.1 Protein Homology CDS 2126 2635 . + 0 ID=cds-OFS99387.1;Parent=gene-HMPREF3107_09925;Dbxref=NCBI_GP:OFS99387.1;Name=OFS99387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774560.1;locus_tag=HMPREF3107_09925;product=hypothetical protein;protein_id=OFS99387.1;transl_table=11 KV790828.1 Genbank gene 2697 3002 . + . ID=gene-HMPREF3107_09930;Name=HMPREF3107_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09930 KV790828.1 Protein Homology CDS 2697 3002 . + 0 ID=cds-OFS99407.1;Parent=gene-HMPREF3107_09930;Dbxref=NCBI_GP:OFS99407.1;Name=OFS99407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284936.1;locus_tag=HMPREF3107_09930;product=hypothetical protein;protein_id=OFS99407.1;transl_table=11 KV790828.1 Genbank gene 3208 4347 . - . ID=gene-HMPREF3107_09935;Name=HMPREF3107_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09935 KV790828.1 Protein Homology CDS 3208 4347 . - 0 ID=cds-OFS99388.1;Parent=gene-HMPREF3107_09935;Dbxref=NCBI_GP:OFS99388.1;Name=OFS99388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774555.1;locus_tag=HMPREF3107_09935;product=class V aminotransferase;protein_id=OFS99388.1;transl_table=11 KV790828.1 Genbank gene 4551 5003 . - . ID=gene-HMPREF3107_09940;Name=HMPREF3107_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09940 KV790828.1 Protein Homology CDS 4551 5003 . - 0 ID=cds-OFS99389.1;Parent=gene-HMPREF3107_09940;Dbxref=NCBI_GP:OFS99389.1;Name=OFS99389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774551.1;locus_tag=HMPREF3107_09940;product=hypothetical protein;protein_id=OFS99389.1;transl_table=11 KV790828.1 Genbank gene 4996 6306 . - . ID=gene-HMPREF3107_09945;Name=HMPREF3107_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09945 KV790828.1 Protein Homology CDS 4996 6306 . - 0 ID=cds-OFS99390.1;Parent=gene-HMPREF3107_09945;Dbxref=NCBI_GP:OFS99390.1;Name=OFS99390.1;Note=catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520380.1;locus_tag=HMPREF3107_09945;product=homoserine dehydrogenase;protein_id=OFS99390.1;transl_table=11 KV790828.1 Genbank gene 6399 6770 . + . ID=gene-HMPREF3107_09950;Name=HMPREF3107_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09950 KV790828.1 Protein Homology CDS 6399 6770 . + 0 ID=cds-OFS99391.1;Parent=gene-HMPREF3107_09950;Dbxref=NCBI_GP:OFS99391.1;Name=OFS99391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774546.1;locus_tag=HMPREF3107_09950;product=rod shape-determining protein RodA;protein_id=OFS99391.1;transl_table=11 KV790828.1 Genbank gene 6874 7782 . + . ID=gene-HMPREF3107_09955;Name=HMPREF3107_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09955 KV790828.1 Protein Homology CDS 6874 7782 . + 0 ID=cds-OFS99392.1;Parent=gene-HMPREF3107_09955;Dbxref=NCBI_GP:OFS99392.1;Name=OFS99392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427242.1;locus_tag=HMPREF3107_09955;product=NAD(+) kinase;protein_id=OFS99392.1;transl_table=11 KV790828.1 Genbank gene 7889 8227 . + . ID=gene-HMPREF3107_09960;Name=HMPREF3107_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09960 KV790828.1 Protein Homology CDS 7889 8227 . + 0 ID=cds-OFS99393.1;Parent=gene-HMPREF3107_09960;Dbxref=NCBI_GP:OFS99393.1;Name=OFS99393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233615.1;locus_tag=HMPREF3107_09960;product=iron-sulfur cluster insertion protein ErpA;protein_id=OFS99393.1;transl_table=11 KV790828.1 Genbank gene 8309 9724 . - . ID=gene-HMPREF3107_09965;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=HMPREF3107_09965 KV790828.1 Protein Homology CDS 8309 9724 . - 0 ID=cds-OFS99394.1;Parent=gene-HMPREF3107_09965;Dbxref=NCBI_GP:OFS99394.1;Name=OFS99394.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283730.1;locus_tag=HMPREF3107_09965;product=aspartate ammonia-lyase;protein_id=OFS99394.1;transl_table=11 KV790828.1 Genbank gene 9920 10192 . - . ID=gene-HMPREF3107_09970;Name=HMPREF3107_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09970 KV790828.1 Protein Homology CDS 9920 10192 . - 0 ID=cds-OFS99395.1;Parent=gene-HMPREF3107_09970;Dbxref=NCBI_GP:OFS99395.1;Name=OFS99395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774540.1;locus_tag=HMPREF3107_09970;product=hypothetical protein;protein_id=OFS99395.1;transl_table=11 KV790828.1 Genbank gene 10185 10583 . - . ID=gene-HMPREF3107_09975;Name=HMPREF3107_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09975 KV790828.1 Protein Homology CDS 10185 10583 . - 0 ID=cds-OFS99396.1;Parent=gene-HMPREF3107_09975;Dbxref=NCBI_GP:OFS99396.1;Name=OFS99396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764331.1;locus_tag=HMPREF3107_09975;product=hypothetical protein;protein_id=OFS99396.1;transl_table=11 KV790828.1 Genbank gene 10670 11050 . - . ID=gene-HMPREF3107_09980;Name=HMPREF3107_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09980 KV790828.1 Protein Homology CDS 10670 11050 . - 0 ID=cds-OFS99397.1;Parent=gene-HMPREF3107_09980;Dbxref=NCBI_GP:OFS99397.1;Name=OFS99397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686098.1;locus_tag=HMPREF3107_09980;product=ElaB protein;protein_id=OFS99397.1;transl_table=11 KV790828.1 Genbank gene 11250 11996 . - . ID=gene-HMPREF3107_09985;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF3107_09985 KV790828.1 Protein Homology CDS 11250 11996 . - 0 ID=cds-OFS99398.1;Parent=gene-HMPREF3107_09985;Dbxref=NCBI_GP:OFS99398.1;Name=OFS99398.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218032.1;locus_tag=HMPREF3107_09985;product=3-oxoacyl-[acyl-carrier-protein] reductase;protein_id=OFS99398.1;transl_table=11 KV790828.1 Genbank gene 12078 12971 . - . ID=gene-HMPREF3107_09990;Name=HMPREF3107_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09990 KV790828.1 Protein Homology CDS 12078 12971 . - 0 ID=cds-OFS99399.1;Parent=gene-HMPREF3107_09990;Dbxref=NCBI_GP:OFS99399.1;Name=OFS99399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823563.1;locus_tag=HMPREF3107_09990;product=NAD(P)-dependent oxidoreductase;protein_id=OFS99399.1;transl_table=11 KV790828.1 Genbank gene 13348 13749 . + . ID=gene-HMPREF3107_09995;Name=HMPREF3107_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_09995 KV790828.1 Protein Homology CDS 13348 13749 . + 0 ID=cds-OFS99400.1;Parent=gene-HMPREF3107_09995;Dbxref=NCBI_GP:OFS99400.1;Name=OFS99400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774527.1;locus_tag=HMPREF3107_09995;product=acyl-CoA thioesterase;protein_id=OFS99400.1;transl_table=11 KV790828.1 Genbank gene 14006 14800 . - . ID=gene-HMPREF3107_10000;Name=HMPREF3107_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10000 KV790828.1 Protein Homology CDS 14006 14800 . - 0 ID=cds-OFS99401.1;Parent=gene-HMPREF3107_10000;Dbxref=NCBI_GP:OFS99401.1;Name=OFS99401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774523.1;locus_tag=HMPREF3107_10000;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=OFS99401.1;transl_table=11 KV790828.1 Genbank gene 15027 15347 . - . ID=gene-HMPREF3107_10005;Name=HMPREF3107_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10005 KV790828.1 Protein Homology CDS 15027 15347 . - 0 ID=cds-OFS99402.1;Parent=gene-HMPREF3107_10005;Dbxref=NCBI_GP:OFS99402.1;Name=OFS99402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774520.1;locus_tag=HMPREF3107_10005;product=diguanylate cyclase;protein_id=OFS99402.1;transl_table=11 KV790828.1 Genbank gene 15397 16137 . - . ID=gene-HMPREF3107_10010;Name=HMPREF3107_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10010 KV790828.1 Protein Homology CDS 15397 16137 . - 0 ID=cds-OFS99403.1;Parent=gene-HMPREF3107_10010;Dbxref=NCBI_GP:OFS99403.1;Name=OFS99403.1;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286207.1;locus_tag=HMPREF3107_10010;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=OFS99403.1;transl_table=11 KV790828.1 Genbank gene 16234 16878 . - . ID=gene-HMPREF3107_10015;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=HMPREF3107_10015 KV790828.1 Protein Homology CDS 16234 16878 . - 0 ID=cds-OFS99404.1;Parent=gene-HMPREF3107_10015;Dbxref=NCBI_GP:OFS99404.1;Name=OFS99404.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286206.1;locus_tag=HMPREF3107_10015;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=OFS99404.1;transl_table=11 KV790828.1 Genbank gene 17511 17738 . + . ID=gene-HMPREF3107_10020;Name=HMPREF3107_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10020 KV790828.1 GeneMarkS+ CDS 17511 17738 . + 0 ID=cds-OFS99405.1;Parent=gene-HMPREF3107_10020;Dbxref=NCBI_GP:OFS99405.1;Name=OFS99405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10020;product=hypothetical protein;protein_id=OFS99405.1;transl_table=11 ##sequence-region KV790829.1 1 4128 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790829.1 Genbank region 1 4128 . + . ID=KV790829.1:1..4128;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790829.1 Genbank gene 1 746 . - . ID=gene-HMPREF3107_10025;Name=HMPREF3107_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10025;partial=true;start_range=.,1 KV790829.1 Protein Homology CDS 1 746 . - 0 ID=cds-OFS99235.1;Parent=gene-HMPREF3107_10025;Dbxref=NCBI_GP:OFS99235.1;Name=OFS99235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273011.1;locus_tag=HMPREF3107_10025;partial=true;product=hypothetical protein;protein_id=OFS99235.1;start_range=.,1;transl_table=11 KV790829.1 Genbank gene 743 1096 . - . ID=gene-HMPREF3107_10030;Name=HMPREF3107_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10030 KV790829.1 Protein Homology CDS 743 1096 . - 0 ID=cds-OFS99236.1;Parent=gene-HMPREF3107_10030;Dbxref=NCBI_GP:OFS99236.1;Name=OFS99236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822029.1;locus_tag=HMPREF3107_10030;product=hypothetical protein;protein_id=OFS99236.1;transl_table=11 KV790829.1 Genbank pseudogene 1154 1639 . - . ID=gene-HMPREF3107_10035;Name=HMPREF3107_10035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10035;pseudo=true KV790829.1 Protein Homology CDS 1154 1639 . - 0 ID=cds-HMPREF3107_10035;Parent=gene-HMPREF3107_10035;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822028.1;locus_tag=HMPREF3107_10035;product=baseplate assembly protein;pseudo=true;transl_table=11 KV790829.1 Genbank gene 1584 2120 . - . ID=gene-HMPREF3107_10040;Name=HMPREF3107_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10040 KV790829.1 GeneMarkS+ CDS 1584 2120 . - 0 ID=cds-OFS99237.1;Parent=gene-HMPREF3107_10040;Dbxref=NCBI_GP:OFS99237.1;Name=OFS99237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10040;product=hypothetical protein;protein_id=OFS99237.1;transl_table=11 KV790829.1 Genbank pseudogene 2206 2979 . - . ID=gene-HMPREF3107_10045;Name=HMPREF3107_10045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10045;pseudo=true KV790829.1 Protein Homology CDS 2206 2979 . - 0 ID=cds-HMPREF3107_10045;Parent=gene-HMPREF3107_10045;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003030356.1;locus_tag=HMPREF3107_10045;product=hypothetical protein;pseudo=true;transl_table=11 KV790829.1 Genbank gene 3229 3507 . - . ID=gene-HMPREF3107_10050;Name=HMPREF3107_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10050 KV790829.1 Protein Homology CDS 3229 3507 . - 0 ID=cds-OFS99238.1;Parent=gene-HMPREF3107_10050;Dbxref=NCBI_GP:OFS99238.1;Name=OFS99238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824124.1;locus_tag=HMPREF3107_10050;product=DNA-binding protein;protein_id=OFS99238.1;transl_table=11 KV790829.1 Genbank pseudogene 3713 4128 . + . ID=gene-HMPREF3107_10055;Name=HMPREF3107_10055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10055;pseudo=true KV790829.1 Protein Homology CDS 3713 4128 . + 0 ID=cds-HMPREF3107_10055;Parent=gene-HMPREF3107_10055;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770580.1;locus_tag=HMPREF3107_10055;product=repressor;pseudo=true;transl_table=11 ##sequence-region KV790830.1 1 985 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790830.1 Genbank region 1 985 . + . ID=KV790830.1:1..985;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790830.1 Genbank direct_repeat 1 293 . + . ID=id-KV790830.1:1..293;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..25;rpt_unit_seq=agccgccttcaggcggctgtgtgtt KV790830.1 Genbank direct_repeat 315 602 . + . ID=id-KV790830.1:315..602;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..25;rpt_unit_seq=gccgccttcaggcggctgtgtgttg KV790830.1 Genbank direct_repeat 624 984 . + . ID=id-KV790830.1:624..984;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..28;rpt_unit_seq=ccgccttcaggcggctgtgtgttgaaac ##sequence-region KV790831.1 1 60744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790831.1 Genbank region 1 60744 . + . ID=KV790831.1:1..60744;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790831.1 Genbank gene 74 706 . - . ID=gene-HMPREF3107_10060;Name=HMPREF3107_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10060 KV790831.1 Protein Homology CDS 74 706 . - 0 ID=cds-OFS98944.1;Parent=gene-HMPREF3107_10060;Dbxref=NCBI_GP:OFS98944.1;Name=OFS98944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520546.1;locus_tag=HMPREF3107_10060;product=nucleoside-diphosphate sugar epimerase;protein_id=OFS98944.1;transl_table=11 KV790831.1 Genbank gene 709 2541 . - . ID=gene-HMPREF3107_10065;Name=HMPREF3107_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10065 KV790831.1 Protein Homology CDS 709 2541 . - 0 ID=cds-OFS98945.1;Parent=gene-HMPREF3107_10065;Dbxref=NCBI_GP:OFS98945.1;Name=OFS98945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425604.1;locus_tag=HMPREF3107_10065;product=putative heme utilization radical SAM enzyme HutW;protein_id=OFS98945.1;transl_table=11 KV790831.1 Genbank gene 2948 4930 . - . ID=gene-HMPREF3107_10070;Name=HMPREF3107_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10070 KV790831.1 Protein Homology CDS 2948 4930 . - 0 ID=cds-OFS98946.1;Parent=gene-HMPREF3107_10070;Dbxref=NCBI_GP:OFS98946.1;Name=OFS98946.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775033.1;locus_tag=HMPREF3107_10070;product=transketolase;protein_id=OFS98946.1;transl_table=11 KV790831.1 Genbank gene 4991 5392 . - . ID=gene-HMPREF3107_10075;Name=HMPREF3107_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10075 KV790831.1 GeneMarkS+ CDS 4991 5392 . - 0 ID=cds-OFS98947.1;Parent=gene-HMPREF3107_10075;Dbxref=NCBI_GP:OFS98947.1;Name=OFS98947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10075;product=hypothetical protein;protein_id=OFS98947.1;transl_table=11 KV790831.1 Genbank gene 5835 6926 . - . ID=gene-HMPREF3107_10080;Name=HMPREF3107_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10080 KV790831.1 Protein Homology CDS 5835 6926 . - 0 ID=cds-OFS98948.1;Parent=gene-HMPREF3107_10080;Dbxref=NCBI_GP:OFS98948.1;Name=OFS98948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003791691.1;locus_tag=HMPREF3107_10080;product=metallophosphoesterase;protein_id=OFS98948.1;transl_table=11 KV790831.1 Genbank gene 7057 7638 . - . ID=gene-HMPREF3107_10085;Name=HMPREF3107_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10085 KV790831.1 Protein Homology CDS 7057 7638 . - 0 ID=cds-OFS98949.1;Parent=gene-HMPREF3107_10085;Dbxref=NCBI_GP:OFS98949.1;Name=OFS98949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766937.1;locus_tag=HMPREF3107_10085;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=OFS98949.1;transl_table=11 KV790831.1 Genbank gene 7819 8397 . - . ID=gene-HMPREF3107_10090;Name=HMPREF3107_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10090 KV790831.1 Protein Homology CDS 7819 8397 . - 0 ID=cds-OFS98950.1;Parent=gene-HMPREF3107_10090;Dbxref=NCBI_GP:OFS98950.1;Name=OFS98950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766937.1;locus_tag=HMPREF3107_10090;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=OFS98950.1;transl_table=11 KV790831.1 Genbank gene 8585 9760 . - . ID=gene-HMPREF3107_10095;Name=HMPREF3107_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10095 KV790831.1 Protein Homology CDS 8585 9760 . - 0 ID=cds-OFS98951.1;Parent=gene-HMPREF3107_10095;Dbxref=NCBI_GP:OFS98951.1;Name=OFS98951.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746998.1;locus_tag=HMPREF3107_10095;product=YggW family oxidoreductase;protein_id=OFS98951.1;transl_table=11 KV790831.1 Genbank gene 9818 10411 . - . ID=gene-HMPREF3107_10100;Name=HMPREF3107_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10100 KV790831.1 Protein Homology CDS 9818 10411 . - 0 ID=cds-OFS98952.1;Parent=gene-HMPREF3107_10100;Dbxref=NCBI_GP:OFS98952.1;Name=OFS98952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756980.1;locus_tag=HMPREF3107_10100;product=non-canonical purine NTP pyrophosphatase;protein_id=OFS98952.1;transl_table=11 KV790831.1 Genbank gene 10421 10651 . - . ID=gene-HMPREF3107_10105;Name=HMPREF3107_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10105 KV790831.1 Protein Homology CDS 10421 10651 . - 0 ID=cds-OFS98953.1;Parent=gene-HMPREF3107_10105;Dbxref=NCBI_GP:OFS98953.1;Name=OFS98953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003787856.1;locus_tag=HMPREF3107_10105;product=hypothetical protein;protein_id=OFS98953.1;transl_table=11 KV790831.1 Genbank gene 10727 11194 . - . ID=gene-HMPREF3107_10110;Name=HMPREF3107_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10110 KV790831.1 Protein Homology CDS 10727 11194 . - 0 ID=cds-OFS98954.1;Parent=gene-HMPREF3107_10110;Dbxref=NCBI_GP:OFS98954.1;Name=OFS98954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173722.1;locus_tag=HMPREF3107_10110;product=protein-tyrosine-phosphatase;protein_id=OFS98954.1;transl_table=11 KV790831.1 Genbank gene 11191 12294 . - . ID=gene-HMPREF3107_10115;Name=HMPREF3107_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10115 KV790831.1 Protein Homology CDS 11191 12294 . - 0 ID=cds-OFS98955.1;Parent=gene-HMPREF3107_10115;Dbxref=NCBI_GP:OFS98955.1;Name=OFS98955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343103.1;locus_tag=HMPREF3107_10115;product=conjugal transfer protein;protein_id=OFS98955.1;transl_table=11 KV790831.1 Genbank gene 12480 13562 . + . ID=gene-HMPREF3107_10120;Name=HMPREF3107_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10120 KV790831.1 Protein Homology CDS 12480 13562 . + 0 ID=cds-OFS98956.1;Parent=gene-HMPREF3107_10120;Dbxref=NCBI_GP:OFS98956.1;Name=OFS98956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282841.1;locus_tag=HMPREF3107_10120;product=prephenate dehydratase;protein_id=OFS98956.1;transl_table=11 KV790831.1 Genbank gene 13645 14319 . + . ID=gene-HMPREF3107_10125;Name=HMPREF3107_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10125 KV790831.1 Protein Homology CDS 13645 14319 . + 0 ID=cds-OFS98957.1;Parent=gene-HMPREF3107_10125;Dbxref=NCBI_GP:OFS98957.1;Name=OFS98957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775065.1;locus_tag=HMPREF3107_10125;product=hypothetical protein;protein_id=OFS98957.1;transl_table=11 KV790831.1 Genbank gene 14323 15156 . + . ID=gene-HMPREF3107_10130;Name=HMPREF3107_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10130 KV790831.1 Protein Homology CDS 14323 15156 . + 0 ID=cds-OFS98958.1;Parent=gene-HMPREF3107_10130;Dbxref=NCBI_GP:OFS98958.1;Name=OFS98958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775066.1;locus_tag=HMPREF3107_10130;product=GDP-L-fucose synthase;protein_id=OFS98958.1;transl_table=11 KV790831.1 Genbank gene 15312 15872 . + . ID=gene-HMPREF3107_10135;Name=HMPREF3107_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10135 KV790831.1 Protein Homology CDS 15312 15872 . + 0 ID=cds-OFS98959.1;Parent=gene-HMPREF3107_10135;Dbxref=NCBI_GP:OFS98959.1;Name=OFS98959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775068.1;locus_tag=HMPREF3107_10135;product=hypothetical protein;protein_id=OFS98959.1;transl_table=11 KV790831.1 Genbank gene 16219 17451 . - . ID=gene-HMPREF3107_10140;Name=HMPREF3107_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10140 KV790831.1 Protein Homology CDS 16219 17451 . - 0 ID=cds-OFS98965.1;Parent=gene-HMPREF3107_10140;Dbxref=NCBI_GP:OFS98965.1;Name=OFS98965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775072.1;locus_tag=HMPREF3107_10140;product=PqiA family protein;protein_id=OFS98965.1;transl_table=11 KV790831.1 Genbank gene 17650 17940 . - . ID=gene-HMPREF3107_10145;Name=HMPREF3107_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10145 KV790831.1 Protein Homology CDS 17650 17940 . - 0 ID=cds-OFS98960.1;Parent=gene-HMPREF3107_10145;Dbxref=NCBI_GP:OFS98960.1;Name=OFS98960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685006.1;locus_tag=HMPREF3107_10145;product=MerR family transcriptional regulator;protein_id=OFS98960.1;transl_table=11 KV790831.1 Genbank gene 17956 18915 . - . ID=gene-HMPREF3107_10150;Name=HMPREF3107_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10150 KV790831.1 Protein Homology CDS 17956 18915 . - 0 ID=cds-OFS98961.1;Parent=gene-HMPREF3107_10150;Dbxref=NCBI_GP:OFS98961.1;Name=OFS98961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270560.1;locus_tag=HMPREF3107_10150;product=DNA-binding protein;protein_id=OFS98961.1;transl_table=11 KV790831.1 Genbank gene 19057 20580 . - . ID=gene-HMPREF3107_10155;Name=HMPREF3107_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10155 KV790831.1 Protein Homology CDS 19057 20580 . - 0 ID=cds-OFS98962.1;Parent=gene-HMPREF3107_10155;Dbxref=NCBI_GP:OFS98962.1;Name=OFS98962.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252306.1;locus_tag=HMPREF3107_10155;product=PLP-dependent threonine dehydratase;protein_id=OFS98962.1;transl_table=11 KV790831.1 Genbank gene 20782 22074 . + . ID=gene-HMPREF3107_10160;Name=HMPREF3107_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10160 KV790831.1 Protein Homology CDS 20782 22074 . + 0 ID=cds-OFS98963.1;Parent=gene-HMPREF3107_10160;Dbxref=NCBI_GP:OFS98963.1;Name=OFS98963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775085.1;locus_tag=HMPREF3107_10160;product=peptidase;protein_id=OFS98963.1;transl_table=11 KV790831.1 Genbank gene 22271 23632 . + . ID=gene-HMPREF3107_10165;Name=HMPREF3107_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10165 KV790831.1 Protein Homology CDS 22271 23632 . + 0 ID=cds-OFS98964.1;Parent=gene-HMPREF3107_10165;Dbxref=NCBI_GP:OFS98964.1;Name=OFS98964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343869.1;locus_tag=HMPREF3107_10165;product=SCP-like protein;protein_id=OFS98964.1;transl_table=11 KV790831.1 Genbank gene 23773 24960 . - . ID=gene-HMPREF3107_10170;Name=HMPREF3107_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10170 KV790831.1 Protein Homology CDS 23773 24960 . - 0 ID=cds-OFS98800.1;Parent=gene-HMPREF3107_10170;Dbxref=NCBI_GP:OFS98800.1;Name=OFS98800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283344.1;locus_tag=HMPREF3107_10170;product=phosphopantothenate synthase;protein_id=OFS98800.1;transl_table=11 KV790831.1 Genbank gene 25023 25745 . + . ID=gene-HMPREF3107_10175;Name=HMPREF3107_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10175 KV790831.1 Protein Homology CDS 25023 25745 . + 0 ID=cds-OFS98801.1;Parent=gene-HMPREF3107_10175;Dbxref=NCBI_GP:OFS98801.1;Name=OFS98801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775096.1;locus_tag=HMPREF3107_10175;product=short-chain dehydrogenase;protein_id=OFS98801.1;transl_table=11 KV790831.1 Genbank gene 26017 26226 . + . ID=gene-HMPREF3107_10180;Name=HMPREF3107_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10180 KV790831.1 Protein Homology CDS 26017 26226 . + 0 ID=cds-OFS98802.1;Parent=gene-HMPREF3107_10180;Dbxref=NCBI_GP:OFS98802.1;Name=OFS98802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674677.1;locus_tag=HMPREF3107_10180;product=hypothetical protein;protein_id=OFS98802.1;transl_table=11 KV790831.1 Genbank gene 26354 27001 . - . ID=gene-HMPREF3107_10185;Name=HMPREF3107_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10185 KV790831.1 Protein Homology CDS 26354 27001 . - 0 ID=cds-OFS98803.1;Parent=gene-HMPREF3107_10185;Dbxref=NCBI_GP:OFS98803.1;Name=OFS98803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712105.1;locus_tag=HMPREF3107_10185;product=hypothetical protein;protein_id=OFS98803.1;transl_table=11 KV790831.1 Genbank gene 27175 27843 . + . ID=gene-HMPREF3107_10190;Name=HMPREF3107_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10190 KV790831.1 Protein Homology CDS 27175 27843 . + 0 ID=cds-OFS98804.1;Parent=gene-HMPREF3107_10190;Dbxref=NCBI_GP:OFS98804.1;Name=OFS98804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693249.1;locus_tag=HMPREF3107_10190;product=DnaA regulatory inactivator Hda;protein_id=OFS98804.1;transl_table=11 KV790831.1 Genbank gene 27840 28508 . + . ID=gene-HMPREF3107_10195;Name=HMPREF3107_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10195 KV790831.1 Protein Homology CDS 27840 28508 . + 0 ID=cds-OFS98805.1;Parent=gene-HMPREF3107_10195;Dbxref=NCBI_GP:OFS98805.1;Name=OFS98805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687170.1;locus_tag=HMPREF3107_10195;product=phosphoserine phosphatase;protein_id=OFS98805.1;transl_table=11 KV790831.1 Genbank gene 28523 28846 . + . ID=gene-HMPREF3107_10200;Name=HMPREF3107_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10200 KV790831.1 Protein Homology CDS 28523 28846 . + 0 ID=cds-OFS98806.1;Parent=gene-HMPREF3107_10200;Dbxref=NCBI_GP:OFS98806.1;Name=OFS98806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775110.1;locus_tag=HMPREF3107_10200;product=cytochrome C biogenesis protein;protein_id=OFS98806.1;transl_table=11 KV790831.1 Genbank gene 29171 29554 . + . ID=gene-HMPREF3107_10205;Name=HMPREF3107_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10205 KV790831.1 Protein Homology CDS 29171 29554 . + 0 ID=cds-OFS98833.1;Parent=gene-HMPREF3107_10205;Dbxref=NCBI_GP:OFS98833.1;Name=OFS98833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273380.1;locus_tag=HMPREF3107_10205;product=aspartate 1-decarboxylase;protein_id=OFS98833.1;transl_table=11 KV790831.1 Genbank gene 29624 30331 . + . ID=gene-HMPREF3107_10210;Name=HMPREF3107_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10210 KV790831.1 Protein Homology CDS 29624 30331 . + 0 ID=cds-OFS98807.1;Parent=gene-HMPREF3107_10210;Dbxref=NCBI_GP:OFS98807.1;Name=OFS98807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683649.1;locus_tag=HMPREF3107_10210;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=OFS98807.1;transl_table=11 KV790831.1 Genbank gene 30478 30972 . + . ID=gene-HMPREF3107_10215;Name=HMPREF3107_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10215 KV790831.1 Protein Homology CDS 30478 30972 . + 0 ID=cds-OFS98808.1;Parent=gene-HMPREF3107_10215;Dbxref=NCBI_GP:OFS98808.1;Name=OFS98808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775119.1;locus_tag=HMPREF3107_10215;product=hypothetical protein;protein_id=OFS98808.1;transl_table=11 KV790831.1 Genbank gene 31057 31422 . + . ID=gene-HMPREF3107_10220;Name=HMPREF3107_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10220 KV790831.1 Protein Homology CDS 31057 31422 . + 0 ID=cds-OFS98809.1;Parent=gene-HMPREF3107_10220;Dbxref=NCBI_GP:OFS98809.1;Name=OFS98809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342613.1;locus_tag=HMPREF3107_10220;product=glyoxalase;protein_id=OFS98809.1;transl_table=11 KV790831.1 Genbank gene 31510 32535 . + . ID=gene-HMPREF3107_10225;Name=HMPREF3107_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10225 KV790831.1 GeneMarkS+ CDS 31510 32535 . + 0 ID=cds-OFS98810.1;Parent=gene-HMPREF3107_10225;Dbxref=NCBI_GP:OFS98810.1;Name=OFS98810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10225;product=hypothetical protein;protein_id=OFS98810.1;transl_table=11 KV790831.1 Genbank gene 32621 33205 . + . ID=gene-HMPREF3107_10230;Name=HMPREF3107_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10230 KV790831.1 Protein Homology CDS 32621 33205 . + 0 ID=cds-OFS98811.1;Parent=gene-HMPREF3107_10230;Dbxref=NCBI_GP:OFS98811.1;Name=OFS98811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775125.1;locus_tag=HMPREF3107_10230;product=lipoprotein localization factor LolB;protein_id=OFS98811.1;transl_table=11 KV790831.1 Genbank gene 33208 34056 . + . ID=gene-HMPREF3107_10235;Name=ipk;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=HMPREF3107_10235 KV790831.1 Protein Homology CDS 33208 34056 . + 0 ID=cds-OFS98812.1;Parent=gene-HMPREF3107_10235;Dbxref=NCBI_GP:OFS98812.1;Name=OFS98812.1;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;gbkey=CDS;gene=ipk;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746458.1;locus_tag=HMPREF3107_10235;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=OFS98812.1;transl_table=11 KV790831.1 Genbank gene 34069 34145 . + . ID=gene-HMPREF3107_10240;Name=HMPREF3107_10240;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_10240 KV790831.1 tRNAscan-SE tRNA 34069 34145 . + . ID=rna-HMPREF3107_10240;Parent=gene-HMPREF3107_10240;anticodon=(pos:34103..34105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_10240;product=tRNA-Gln KV790831.1 tRNAscan-SE exon 34069 34145 . + . ID=exon-HMPREF3107_10240-1;Parent=rna-HMPREF3107_10240;anticodon=(pos:34103..34105);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_10240;product=tRNA-Gln KV790831.1 Genbank gene 34161 34237 . + . ID=gene-HMPREF3107_10245;Name=HMPREF3107_10245;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF3107_10245 KV790831.1 tRNAscan-SE tRNA 34161 34237 . + . ID=rna-HMPREF3107_10245;Parent=gene-HMPREF3107_10245;anticodon=(pos:34195..34197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_10245;product=tRNA-Gln KV790831.1 tRNAscan-SE exon 34161 34237 . + . ID=exon-HMPREF3107_10245-1;Parent=rna-HMPREF3107_10245;anticodon=(pos:34195..34197);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF3107_10245;product=tRNA-Gln KV790831.1 Genbank gene 34375 35409 . + . ID=gene-HMPREF3107_10250;Name=HMPREF3107_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10250 KV790831.1 Protein Homology CDS 34375 35409 . + 0 ID=cds-OFS98813.1;Parent=gene-HMPREF3107_10250;Dbxref=NCBI_GP:OFS98813.1;Name=OFS98813.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680786.1;locus_tag=HMPREF3107_10250;product=ribose-phosphate pyrophosphokinase;protein_id=OFS98813.1;transl_table=11 KV790831.1 Genbank gene 35499 36071 . + . ID=gene-HMPREF3107_10255;Name=HMPREF3107_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10255 KV790831.1 Protein Homology CDS 35499 36071 . + 0 ID=cds-OFS98814.1;Parent=gene-HMPREF3107_10255;Dbxref=NCBI_GP:OFS98814.1;Name=OFS98814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771771.1;locus_tag=HMPREF3107_10255;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=OFS98814.1;transl_table=11 KV790831.1 Genbank gene 36452 39217 . - . ID=gene-HMPREF3107_10260;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF3107_10260 KV790831.1 Protein Homology CDS 36452 39217 . - 0 ID=cds-OFS98815.1;Parent=gene-HMPREF3107_10260;Dbxref=NCBI_GP:OFS98815.1;Name=OFS98815.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742979.1;locus_tag=HMPREF3107_10260;product=preprotein translocase subunit SecA;protein_id=OFS98815.1;transl_table=11 KV790831.1 Genbank gene 39433 41202 . + . ID=gene-HMPREF3107_10265;Name=HMPREF3107_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10265 KV790831.1 Protein Homology CDS 39433 41202 . + 0 ID=cds-OFS98816.1;Parent=gene-HMPREF3107_10265;Dbxref=NCBI_GP:OFS98816.1;Name=OFS98816.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311651.1;locus_tag=HMPREF3107_10265;product=sulfite reductase subunit beta;protein_id=OFS98816.1;transl_table=11 KV790831.1 Genbank gene 41295 42509 . - . ID=gene-HMPREF3107_10270;Name=HMPREF3107_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10270 KV790831.1 Protein Homology CDS 41295 42509 . - 0 ID=cds-OFS98817.1;Parent=gene-HMPREF3107_10270;Dbxref=NCBI_GP:OFS98817.1;Name=OFS98817.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448754.1;locus_tag=HMPREF3107_10270;product=aminotransferase;protein_id=OFS98817.1;transl_table=11 KV790831.1 Genbank gene 42669 43604 . - . ID=gene-HMPREF3107_10275;Name=HMPREF3107_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10275 KV790831.1 Protein Homology CDS 42669 43604 . - 0 ID=cds-OFS98818.1;Parent=gene-HMPREF3107_10275;Dbxref=NCBI_GP:OFS98818.1;Name=OFS98818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284994.1;locus_tag=HMPREF3107_10275;product=prolyl aminopeptidase;protein_id=OFS98818.1;transl_table=11 KV790831.1 Genbank gene 43662 44498 . - . ID=gene-HMPREF3107_10280;Name=HMPREF3107_10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10280 KV790831.1 Protein Homology CDS 43662 44498 . - 0 ID=cds-OFS98819.1;Parent=gene-HMPREF3107_10280;Dbxref=NCBI_GP:OFS98819.1;Name=OFS98819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284347.1;locus_tag=HMPREF3107_10280;product=pantoate--beta-alanine ligase;protein_id=OFS98819.1;transl_table=11 KV790831.1 Genbank gene 44695 45633 . + . ID=gene-HMPREF3107_10285;Name=HMPREF3107_10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10285 KV790831.1 Protein Homology CDS 44695 45633 . + 0 ID=cds-OFS98820.1;Parent=gene-HMPREF3107_10285;Dbxref=NCBI_GP:OFS98820.1;Name=OFS98820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771751.1;locus_tag=HMPREF3107_10285;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=OFS98820.1;transl_table=11 KV790831.1 Genbank gene 45889 46419 . + . ID=gene-HMPREF3107_10290;Name=HMPREF3107_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10290 KV790831.1 Protein Homology CDS 45889 46419 . + 0 ID=cds-OFS98821.1;Parent=gene-HMPREF3107_10290;Dbxref=NCBI_GP:OFS98821.1;Name=OFS98821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341931.1;locus_tag=HMPREF3107_10290;product=RDD family protein;protein_id=OFS98821.1;transl_table=11 KV790831.1 Genbank gene 46433 46696 . + . ID=gene-HMPREF3107_10295;Name=HMPREF3107_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10295 KV790831.1 GeneMarkS+ CDS 46433 46696 . + 0 ID=cds-OFS98822.1;Parent=gene-HMPREF3107_10295;Dbxref=NCBI_GP:OFS98822.1;Name=OFS98822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10295;product=hypothetical protein;protein_id=OFS98822.1;transl_table=11 KV790831.1 Genbank gene 46763 48148 . + . ID=gene-HMPREF3107_10300;Name=HMPREF3107_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10300 KV790831.1 Protein Homology CDS 46763 48148 . + 0 ID=cds-OFS98823.1;Parent=gene-HMPREF3107_10300;Dbxref=NCBI_GP:OFS98823.1;Name=OFS98823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003791365.1;locus_tag=HMPREF3107_10300;product=MFS transporter;protein_id=OFS98823.1;transl_table=11 KV790831.1 Genbank gene 48219 48668 . + . ID=gene-HMPREF3107_10305;Name=HMPREF3107_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10305 KV790831.1 Protein Homology CDS 48219 48668 . + 0 ID=cds-OFS98824.1;Parent=gene-HMPREF3107_10305;Dbxref=NCBI_GP:OFS98824.1;Name=OFS98824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686918.1;locus_tag=HMPREF3107_10305;product=hypothetical protein;protein_id=OFS98824.1;transl_table=11 KV790831.1 Genbank gene 48859 49671 . + . ID=gene-HMPREF3107_10310;Name=HMPREF3107_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10310 KV790831.1 Protein Homology CDS 48859 49671 . + 0 ID=cds-OFS98825.1;Parent=gene-HMPREF3107_10310;Dbxref=NCBI_GP:OFS98825.1;Name=OFS98825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003781710.1;locus_tag=HMPREF3107_10310;product=hypothetical protein;protein_id=OFS98825.1;transl_table=11 KV790831.1 Genbank gene 49802 52333 . + . ID=gene-HMPREF3107_10315;Name=HMPREF3107_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10315 KV790831.1 Protein Homology CDS 49802 52333 . + 0 ID=cds-OFS98826.1;Parent=gene-HMPREF3107_10315;Dbxref=NCBI_GP:OFS98826.1;Name=OFS98826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005565160.1;locus_tag=HMPREF3107_10315;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=OFS98826.1;transl_table=11 KV790831.1 Genbank gene 52341 53063 . + . ID=gene-HMPREF3107_10320;Name=HMPREF3107_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10320 KV790831.1 Protein Homology CDS 52341 53063 . + 0 ID=cds-OFS98827.1;Parent=gene-HMPREF3107_10320;Dbxref=NCBI_GP:OFS98827.1;Name=OFS98827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635203.1;locus_tag=HMPREF3107_10320;product=type I-C CRISPR-associated protein Cas5;protein_id=OFS98827.1;transl_table=11 KV790831.1 Genbank gene 53060 55060 . + . ID=gene-HMPREF3107_10325;Name=HMPREF3107_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10325 KV790831.1 Protein Homology CDS 53060 55060 . + 0 ID=cds-OFS98828.1;Parent=gene-HMPREF3107_10325;Dbxref=NCBI_GP:OFS98828.1;Name=OFS98828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540835.1;locus_tag=HMPREF3107_10325;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=OFS98828.1;transl_table=11 KV790831.1 Genbank pseudogene 55082 55974 . + . ID=gene-HMPREF3107_10330;Name=HMPREF3107_10330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10330;pseudo=true KV790831.1 Protein Homology CDS 55082 55974 . + 0 ID=cds-HMPREF3107_10330;Parent=gene-HMPREF3107_10330;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540837.1;locus_tag=HMPREF3107_10330;product=type I-C CRISPR-associated protein Cas7/Csd2;pseudo=true;transl_table=11 KV790831.1 Genbank gene 55996 56646 . + . ID=gene-HMPREF3107_10335;Name=HMPREF3107_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10335 KV790831.1 Protein Homology CDS 55996 56646 . + 0 ID=cds-OFS98829.1;Parent=gene-HMPREF3107_10335;Dbxref=NCBI_GP:OFS98829.1;Name=OFS98829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758693.1;locus_tag=HMPREF3107_10335;product=CRISPR-associated protein Cas4;protein_id=OFS98829.1;transl_table=11 KV790831.1 Genbank gene 56678 57601 . + . ID=gene-HMPREF3107_10340;Name=HMPREF3107_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10340 KV790831.1 GeneMarkS+ CDS 56678 57601 . + 0 ID=cds-OFS98830.1;Parent=gene-HMPREF3107_10340;Dbxref=NCBI_GP:OFS98830.1;Name=OFS98830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10340;product=hypothetical protein;protein_id=OFS98830.1;transl_table=11 KV790831.1 Genbank gene 57699 58712 . + . ID=gene-HMPREF3107_10345;Name=HMPREF3107_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10345 KV790831.1 Protein Homology CDS 57699 58712 . + 0 ID=cds-OFS98831.1;Parent=gene-HMPREF3107_10345;Dbxref=NCBI_GP:OFS98831.1;Name=OFS98831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762781.1;locus_tag=HMPREF3107_10345;product=subtype I-C CRISPR-associated endonuclease Cas1;protein_id=OFS98831.1;transl_table=11 KV790831.1 Genbank gene 58788 59081 . + . ID=gene-HMPREF3107_10350;Name=HMPREF3107_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10350 KV790831.1 Protein Homology CDS 58788 59081 . + 0 ID=cds-OFS98832.1;Parent=gene-HMPREF3107_10350;Dbxref=NCBI_GP:OFS98832.1;Name=OFS98832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271087.1;locus_tag=HMPREF3107_10350;product=CRISPR-associated endonuclease Cas2;protein_id=OFS98832.1;transl_table=11 KV790831.1 Genbank direct_repeat 59271 59562 . + . ID=id-KV790831.1:59271..59562;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=35563..35588;rpt_unit_seq=ccagccgccttcaggcggctgtgtgt KV790831.1 Genbank direct_repeat 59832 60250 . + . ID=id-KV790831.1:59832..60250;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..25;rpt_unit_seq=gccgccttcaggcggctgtgtgttg ##sequence-region KV790832.1 1 6625 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790832.1 Genbank region 1 6625 . + . ID=KV790832.1:1..6625;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790832.1 Genbank gene 104 1018 . - . ID=gene-HMPREF3107_10355;Name=HMPREF3107_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10355 KV790832.1 Protein Homology CDS 104 1018 . - 0 ID=cds-OFS98632.1;Parent=gene-HMPREF3107_10355;Dbxref=NCBI_GP:OFS98632.1;Name=OFS98632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018574957.1;locus_tag=HMPREF3107_10355;product=sulfate adenylyltransferase small subunit;protein_id=OFS98632.1;transl_table=11 KV790832.1 Genbank gene 1412 2671 . - . ID=gene-HMPREF3107_10360;Name=HMPREF3107_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10360 KV790832.1 Protein Homology CDS 1412 2671 . - 0 ID=cds-OFS98633.1;Parent=gene-HMPREF3107_10360;Dbxref=NCBI_GP:OFS98633.1;Name=OFS98633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774703.1;locus_tag=HMPREF3107_10360;product=glutamyl-tRNA reductase;protein_id=OFS98633.1;transl_table=11 KV790832.1 Genbank gene 2926 4443 . + . ID=gene-HMPREF3107_10365;Name=HMPREF3107_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10365 KV790832.1 Protein Homology CDS 2926 4443 . + 0 ID=cds-OFS98636.1;Parent=gene-HMPREF3107_10365;Dbxref=NCBI_GP:OFS98636.1;Name=OFS98636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744336.1;locus_tag=HMPREF3107_10365;product=cytochrome c oxidase accessory protein CcoG;protein_id=OFS98636.1;transl_table=11 KV790832.1 Genbank gene 4446 4997 . + . ID=gene-HMPREF3107_10370;Name=HMPREF3107_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10370 KV790832.1 Protein Homology CDS 4446 4997 . + 0 ID=cds-OFS98634.1;Parent=gene-HMPREF3107_10370;Dbxref=NCBI_GP:OFS98634.1;Name=OFS98634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284854.1;locus_tag=HMPREF3107_10370;product=hypothetical protein;protein_id=OFS98634.1;transl_table=11 KV790832.1 Genbank gene 5085 6068 . - . ID=gene-HMPREF3107_10375;Name=HMPREF3107_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10375 KV790832.1 Protein Homology CDS 5085 6068 . - 0 ID=cds-OFS98635.1;Parent=gene-HMPREF3107_10375;Dbxref=NCBI_GP:OFS98635.1;Name=OFS98635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681044.1;locus_tag=HMPREF3107_10375;product=tRNA-dihydrouridine synthase C;protein_id=OFS98635.1;transl_table=11 KV790832.1 Genbank pseudogene 6257 6625 . - . ID=gene-HMPREF3107_10380;Name=HMPREF3107_10380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10380;pseudo=true KV790832.1 Protein Homology CDS 6257 6625 . - 0 ID=cds-HMPREF3107_10380;Parent=gene-HMPREF3107_10380;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581578.1;locus_tag=HMPREF3107_10380;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV790833.1 1 58070 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790833.1 Genbank region 1 58070 . + . ID=KV790833.1:1..58070;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790833.1 Genbank gene 215 1138 . + . ID=gene-HMPREF3107_10385;Name=HMPREF3107_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10385 KV790833.1 Protein Homology CDS 215 1138 . + 0 ID=cds-OFS98570.1;Parent=gene-HMPREF3107_10385;Dbxref=NCBI_GP:OFS98570.1;Name=OFS98570.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425861.1;locus_tag=HMPREF3107_10385;product=homoserine kinase;protein_id=OFS98570.1;transl_table=11 KV790833.1 Genbank gene 1347 2762 . + . ID=gene-HMPREF3107_10390;Name=HMPREF3107_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10390 KV790833.1 Protein Homology CDS 1347 2762 . + 0 ID=cds-OFS98571.1;Parent=gene-HMPREF3107_10390;Dbxref=NCBI_GP:OFS98571.1;Name=OFS98571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389072.1;locus_tag=HMPREF3107_10390;product=sodium:proton antiporter;protein_id=OFS98571.1;transl_table=11 KV790833.1 Genbank gene 3002 4834 . + . ID=gene-HMPREF3107_10395;Name=HMPREF3107_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10395 KV790833.1 Protein Homology CDS 3002 4834 . + 0 ID=cds-OFS98572.1;Parent=gene-HMPREF3107_10395;Dbxref=NCBI_GP:OFS98572.1;Name=OFS98572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772497.1;locus_tag=HMPREF3107_10395;product=lytic murein transglycosylase;protein_id=OFS98572.1;transl_table=11 KV790833.1 Genbank gene 5275 5475 . + . ID=gene-HMPREF3107_10400;Name=HMPREF3107_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10400 KV790833.1 Protein Homology CDS 5275 5475 . + 0 ID=cds-OFS98573.1;Parent=gene-HMPREF3107_10400;Dbxref=NCBI_GP:OFS98573.1;Name=OFS98573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520971.1;locus_tag=HMPREF3107_10400;product=hypothetical protein;protein_id=OFS98573.1;transl_table=11 KV790833.1 Genbank gene 6059 7507 . + . ID=gene-HMPREF3107_10405;Name=HMPREF3107_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10405 KV790833.1 Protein Homology CDS 6059 7507 . + 0 ID=cds-OFS98574.1;Parent=gene-HMPREF3107_10405;Dbxref=NCBI_GP:OFS98574.1;Name=OFS98574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686806.1;locus_tag=HMPREF3107_10405;product=MFS transporter;protein_id=OFS98574.1;transl_table=11 KV790833.1 Genbank gene 7575 8540 . + . ID=gene-HMPREF3107_10410;Name=HMPREF3107_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10410 KV790833.1 Protein Homology CDS 7575 8540 . + 0 ID=cds-OFS98575.1;Parent=gene-HMPREF3107_10410;Dbxref=NCBI_GP:OFS98575.1;Name=OFS98575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772487.1;locus_tag=HMPREF3107_10410;product=hypothetical protein;protein_id=OFS98575.1;transl_table=11 KV790833.1 Genbank gene 8646 10436 . + . ID=gene-HMPREF3107_10415;Name=HMPREF3107_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10415 KV790833.1 Protein Homology CDS 8646 10436 . + 0 ID=cds-OFS98576.1;Parent=gene-HMPREF3107_10415;Dbxref=NCBI_GP:OFS98576.1;Name=OFS98576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146933.1;locus_tag=HMPREF3107_10415;product=peptidase M24;protein_id=OFS98576.1;transl_table=11 KV790833.1 Genbank gene 10531 11634 . - . ID=gene-HMPREF3107_10420;Name=HMPREF3107_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10420 KV790833.1 GeneMarkS+ CDS 10531 11634 . - 0 ID=cds-OFS98577.1;Parent=gene-HMPREF3107_10420;Dbxref=NCBI_GP:OFS98577.1;Name=OFS98577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10420;product=hypothetical protein;protein_id=OFS98577.1;transl_table=11 KV790833.1 Genbank gene 12097 12408 . + . ID=gene-HMPREF3107_10425;Name=HMPREF3107_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10425 KV790833.1 GeneMarkS+ CDS 12097 12408 . + 0 ID=cds-OFS98578.1;Parent=gene-HMPREF3107_10425;Dbxref=NCBI_GP:OFS98578.1;Name=OFS98578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10425;product=hypothetical protein;protein_id=OFS98578.1;transl_table=11 KV790833.1 Genbank gene 12582 13166 . + . ID=gene-HMPREF3107_10430;Name=HMPREF3107_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10430 KV790833.1 Protein Homology CDS 12582 13166 . + 0 ID=cds-OFS98579.1;Parent=gene-HMPREF3107_10430;Dbxref=NCBI_GP:OFS98579.1;Name=OFS98579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226947.1;locus_tag=HMPREF3107_10430;product=Holliday junction DNA helicase RuvA;protein_id=OFS98579.1;transl_table=11 KV790833.1 Genbank gene 13347 15266 . + . ID=gene-HMPREF3107_10435;Name=HMPREF3107_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10435 KV790833.1 Protein Homology CDS 13347 15266 . + 0 ID=cds-OFS98580.1;Parent=gene-HMPREF3107_10435;Dbxref=NCBI_GP:OFS98580.1;Name=OFS98580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712496.1;locus_tag=HMPREF3107_10435;product=TonB-dependent receptor;protein_id=OFS98580.1;transl_table=11 KV790833.1 Genbank gene 15324 16301 . + . ID=gene-HMPREF3107_10440;Name=HMPREF3107_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10440 KV790833.1 Protein Homology CDS 15324 16301 . + 0 ID=cds-OFS98581.1;Parent=gene-HMPREF3107_10440;Dbxref=NCBI_GP:OFS98581.1;Name=OFS98581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686208.1;locus_tag=HMPREF3107_10440;product=hypothetical protein;protein_id=OFS98581.1;transl_table=11 KV790833.1 Genbank pseudogene 16446 16699 . + . ID=gene-HMPREF3107_10445;Name=HMPREF3107_10445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10445;pseudo=true KV790833.1 GeneMarkS+ CDS 16446 16699 . + 2 ID=cds-HMPREF3107_10445;Parent=gene-HMPREF3107_10445;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10445;product=hypothetical protein;pseudo=true;transl_table=11 KV790833.1 Genbank gene 16721 17518 . + . ID=gene-HMPREF3107_10450;Name=HMPREF3107_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10450 KV790833.1 Protein Homology CDS 16721 17518 . + 0 ID=cds-OFS98501.1;Parent=gene-HMPREF3107_10450;Dbxref=NCBI_GP:OFS98501.1;Name=OFS98501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776012.1;locus_tag=HMPREF3107_10450;product=ABC transporter permease;protein_id=OFS98501.1;transl_table=11 KV790833.1 Genbank gene 17515 18210 . + . ID=gene-HMPREF3107_10455;Name=HMPREF3107_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10455 KV790833.1 Protein Homology CDS 17515 18210 . + 0 ID=cds-OFS98502.1;Parent=gene-HMPREF3107_10455;Dbxref=NCBI_GP:OFS98502.1;Name=OFS98502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751811.1;locus_tag=HMPREF3107_10455;product=ABC transporter ATP-binding protein;protein_id=OFS98502.1;transl_table=11 KV790833.1 Genbank gene 18521 19135 . + . ID=gene-HMPREF3107_10460;Name=HMPREF3107_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10460 KV790833.1 Protein Homology CDS 18521 19135 . + 0 ID=cds-OFS98524.1;Parent=gene-HMPREF3107_10460;Dbxref=NCBI_GP:OFS98524.1;Name=OFS98524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678684.1;locus_tag=HMPREF3107_10460;product=cadmium transporter;protein_id=OFS98524.1;transl_table=11 KV790833.1 Genbank gene 19419 20516 . + . ID=gene-HMPREF3107_10465;Name=HMPREF3107_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10465 KV790833.1 Protein Homology CDS 19419 20516 . + 0 ID=cds-OFS98503.1;Parent=gene-HMPREF3107_10465;Dbxref=NCBI_GP:OFS98503.1;Name=OFS98503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675858.1;locus_tag=HMPREF3107_10465;product=hypothetical protein;protein_id=OFS98503.1;transl_table=11 KV790833.1 Genbank gene 21102 21608 . + . ID=gene-HMPREF3107_10470;Name=HMPREF3107_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10470 KV790833.1 Protein Homology CDS 21102 21608 . + 0 ID=cds-OFS98504.1;Parent=gene-HMPREF3107_10470;Dbxref=NCBI_GP:OFS98504.1;Name=OFS98504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005249774.1;locus_tag=HMPREF3107_10470;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=OFS98504.1;transl_table=11 KV790833.1 Genbank gene 21701 22885 . + . ID=gene-HMPREF3107_10475;Name=HMPREF3107_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10475 KV790833.1 GeneMarkS+ CDS 21701 22885 . + 0 ID=cds-OFS98505.1;Parent=gene-HMPREF3107_10475;Dbxref=NCBI_GP:OFS98505.1;Name=OFS98505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10475;product=hypothetical protein;protein_id=OFS98505.1;transl_table=11 KV790833.1 Genbank gene 22929 23423 . + . ID=gene-HMPREF3107_10480;Name=HMPREF3107_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10480 KV790833.1 GeneMarkS+ CDS 22929 23423 . + 0 ID=cds-OFS98506.1;Parent=gene-HMPREF3107_10480;Dbxref=NCBI_GP:OFS98506.1;Name=OFS98506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10480;product=hypothetical protein;protein_id=OFS98506.1;transl_table=11 KV790833.1 Genbank gene 23516 24307 . + . ID=gene-HMPREF3107_10485;Name=HMPREF3107_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10485 KV790833.1 Protein Homology CDS 23516 24307 . + 0 ID=cds-OFS98507.1;Parent=gene-HMPREF3107_10485;Dbxref=NCBI_GP:OFS98507.1;Name=OFS98507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687140.1;locus_tag=HMPREF3107_10485;product=fimb protein;protein_id=OFS98507.1;transl_table=11 KV790833.1 Genbank gene 24382 25461 . - . ID=gene-HMPREF3107_10490;Name=HMPREF3107_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10490 KV790833.1 Protein Homology CDS 24382 25461 . - 0 ID=cds-OFS98508.1;Parent=gene-HMPREF3107_10490;Dbxref=NCBI_GP:OFS98508.1;Name=OFS98508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270463.1;locus_tag=HMPREF3107_10490;product=ATP-binding protein;protein_id=OFS98508.1;transl_table=11 KV790833.1 Genbank gene 25750 26550 . + . ID=gene-HMPREF3107_10495;Name=HMPREF3107_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10495 KV790833.1 Protein Homology CDS 25750 26550 . + 0 ID=cds-OFS98509.1;Parent=gene-HMPREF3107_10495;Dbxref=NCBI_GP:OFS98509.1;Name=OFS98509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772452.1;locus_tag=HMPREF3107_10495;product=ABC transporter ATP-binding protein;protein_id=OFS98509.1;transl_table=11 KV790833.1 Genbank gene 26613 27389 . + . ID=gene-HMPREF3107_10500;Name=HMPREF3107_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10500 KV790833.1 Protein Homology CDS 26613 27389 . + 0 ID=cds-OFS98510.1;Parent=gene-HMPREF3107_10500;Dbxref=NCBI_GP:OFS98510.1;Name=OFS98510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343932.1;locus_tag=HMPREF3107_10500;product=ABC transporter permease;protein_id=OFS98510.1;transl_table=11 KV790833.1 Genbank gene 27421 27921 . + . ID=gene-HMPREF3107_10505;Name=HMPREF3107_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10505 KV790833.1 Protein Homology CDS 27421 27921 . + 0 ID=cds-OFS98511.1;Parent=gene-HMPREF3107_10505;Dbxref=NCBI_GP:OFS98511.1;Name=OFS98511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772450.1;locus_tag=HMPREF3107_10505;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=OFS98511.1;transl_table=11 KV790833.1 Genbank gene 27954 28550 . + . ID=gene-HMPREF3107_10510;Name=HMPREF3107_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10510 KV790833.1 Protein Homology CDS 27954 28550 . + 0 ID=cds-OFS98512.1;Parent=gene-HMPREF3107_10510;Dbxref=NCBI_GP:OFS98512.1;Name=OFS98512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427063.1;locus_tag=HMPREF3107_10510;product=transporter;protein_id=OFS98512.1;transl_table=11 KV790833.1 Genbank gene 28550 28825 . + . ID=gene-HMPREF3107_10515;Name=HMPREF3107_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10515 KV790833.1 Protein Homology CDS 28550 28825 . + 0 ID=cds-OFS98513.1;Parent=gene-HMPREF3107_10515;Dbxref=NCBI_GP:OFS98513.1;Name=OFS98513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284373.1;locus_tag=HMPREF3107_10515;product=sulfate transporter;protein_id=OFS98513.1;transl_table=11 KV790833.1 Genbank gene 28810 29781 . + . ID=gene-HMPREF3107_10520;Name=HMPREF3107_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10520 KV790833.1 Protein Homology CDS 28810 29781 . + 0 ID=cds-OFS98514.1;Parent=gene-HMPREF3107_10520;Dbxref=NCBI_GP:OFS98514.1;Name=OFS98514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772447.1;locus_tag=HMPREF3107_10520;product=ABC transporter;protein_id=OFS98514.1;transl_table=11 KV790833.1 Genbank gene 29966 30799 . + . ID=gene-HMPREF3107_10525;Name=HMPREF3107_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10525 KV790833.1 Protein Homology CDS 29966 30799 . + 0 ID=cds-OFS98515.1;Parent=gene-HMPREF3107_10525;Dbxref=NCBI_GP:OFS98515.1;Name=OFS98515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765408.1;locus_tag=HMPREF3107_10525;product=hypothetical protein;protein_id=OFS98515.1;transl_table=11 KV790833.1 Genbank gene 30879 32321 . - . ID=gene-HMPREF3107_10530;Name=HMPREF3107_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10530 KV790833.1 Protein Homology CDS 30879 32321 . - 0 ID=cds-OFS98516.1;Parent=gene-HMPREF3107_10530;Dbxref=NCBI_GP:OFS98516.1;Name=OFS98516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772444.1;locus_tag=HMPREF3107_10530;product=magnesium transporter;protein_id=OFS98516.1;transl_table=11 KV790833.1 Genbank gene 32534 33586 . - . ID=gene-HMPREF3107_10535;Name=HMPREF3107_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10535 KV790833.1 Protein Homology CDS 32534 33586 . - 0 ID=cds-OFS98517.1;Parent=gene-HMPREF3107_10535;Dbxref=NCBI_GP:OFS98517.1;Name=OFS98517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772440.1;locus_tag=HMPREF3107_10535;product=protease;protein_id=OFS98517.1;transl_table=11 KV790833.1 Genbank gene 33627 34295 . - . ID=gene-HMPREF3107_10540;Name=HMPREF3107_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10540 KV790833.1 Protein Homology CDS 33627 34295 . - 0 ID=cds-OFS98518.1;Parent=gene-HMPREF3107_10540;Dbxref=NCBI_GP:OFS98518.1;Name=OFS98518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772438.1;locus_tag=HMPREF3107_10540;product=HAD family hydrolase;protein_id=OFS98518.1;transl_table=11 KV790833.1 Genbank gene 34313 35044 . - . ID=gene-HMPREF3107_10545;Name=HMPREF3107_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10545 KV790833.1 Protein Homology CDS 34313 35044 . - 0 ID=cds-OFS98519.1;Parent=gene-HMPREF3107_10545;Dbxref=NCBI_GP:OFS98519.1;Name=OFS98519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686578.1;locus_tag=HMPREF3107_10545;product=Rossman fold protein%2C TIGR00730 family;protein_id=OFS98519.1;transl_table=11 KV790833.1 Genbank gene 35191 36408 . - . ID=gene-HMPREF3107_10550;Name=HMPREF3107_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10550 KV790833.1 Protein Homology CDS 35191 36408 . - 0 ID=cds-OFS98525.1;Parent=gene-HMPREF3107_10550;Dbxref=NCBI_GP:OFS98525.1;Name=OFS98525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686509.1;locus_tag=HMPREF3107_10550;product=peroxidase;protein_id=OFS98525.1;transl_table=11 KV790833.1 Genbank gene 36637 37269 . - . ID=gene-HMPREF3107_10555;Name=HMPREF3107_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10555 KV790833.1 Protein Homology CDS 36637 37269 . - 0 ID=cds-OFS98520.1;Parent=gene-HMPREF3107_10555;Dbxref=NCBI_GP:OFS98520.1;Name=OFS98520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772431.1;locus_tag=HMPREF3107_10555;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=OFS98520.1;transl_table=11 KV790833.1 Genbank gene 37418 38047 . + . ID=gene-HMPREF3107_10560;Name=HMPREF3107_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10560 KV790833.1 Protein Homology CDS 37418 38047 . + 0 ID=cds-OFS98521.1;Parent=gene-HMPREF3107_10560;Dbxref=NCBI_GP:OFS98521.1;Name=OFS98521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712573.1;locus_tag=HMPREF3107_10560;product=cytochrome C;protein_id=OFS98521.1;transl_table=11 KV790833.1 Genbank gene 38199 40229 . + . ID=gene-HMPREF3107_10565;Name=HMPREF3107_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10565 KV790833.1 Protein Homology CDS 38199 40229 . + 0 ID=cds-OFS98522.1;Parent=gene-HMPREF3107_10565;Dbxref=NCBI_GP:OFS98522.1;Name=OFS98522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712572.1;locus_tag=HMPREF3107_10565;product=cytochrome C biogenesis protein;protein_id=OFS98522.1;transl_table=11 KV790833.1 Genbank gene 40204 41409 . + . ID=gene-HMPREF3107_10570;Name=HMPREF3107_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10570 KV790833.1 Protein Homology CDS 40204 41409 . + 0 ID=cds-OFS98523.1;Parent=gene-HMPREF3107_10570;Dbxref=NCBI_GP:OFS98523.1;Name=OFS98523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772421.1;locus_tag=HMPREF3107_10570;product=c-type cytochrome biogenesis protein CcsB;protein_id=OFS98523.1;transl_table=11 KV790833.1 Genbank gene 41843 42592 . + . ID=gene-HMPREF3107_10575;Name=HMPREF3107_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10575 KV790833.1 Protein Homology CDS 41843 42592 . + 0 ID=cds-OFS98478.1;Parent=gene-HMPREF3107_10575;Dbxref=NCBI_GP:OFS98478.1;Name=OFS98478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXG9.1;locus_tag=HMPREF3107_10575;product=Nif3-like dinuclear metal center hexameric protein;protein_id=OFS98478.1;transl_table=11 KV790833.1 Genbank gene 42716 43300 . + . ID=gene-HMPREF3107_10580;Name=HMPREF3107_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10580 KV790833.1 Protein Homology CDS 42716 43300 . + 0 ID=cds-OFS98479.1;Parent=gene-HMPREF3107_10580;Dbxref=NCBI_GP:OFS98479.1;Name=OFS98479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273542.1;locus_tag=HMPREF3107_10580;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=OFS98479.1;transl_table=11 KV790833.1 Genbank gene 43315 44664 . + . ID=gene-HMPREF3107_10585;Name=HMPREF3107_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10585 KV790833.1 Protein Homology CDS 43315 44664 . + 0 ID=cds-OFS98480.1;Parent=gene-HMPREF3107_10585;Dbxref=NCBI_GP:OFS98480.1;Name=OFS98480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218185.1;locus_tag=HMPREF3107_10585;product=cytochrome B;protein_id=OFS98480.1;transl_table=11 KV790833.1 Genbank gene 44678 45463 . + . ID=gene-HMPREF3107_10590;Name=HMPREF3107_10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10590 KV790833.1 Protein Homology CDS 44678 45463 . + 0 ID=cds-OFS98481.1;Parent=gene-HMPREF3107_10590;Dbxref=NCBI_GP:OFS98481.1;Name=OFS98481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283127.1;locus_tag=HMPREF3107_10590;product=cytochrome C;protein_id=OFS98481.1;transl_table=11 KV790833.1 Genbank gene 45646 46251 . + . ID=gene-HMPREF3107_10595;Name=HMPREF3107_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10595 KV790833.1 Protein Homology CDS 45646 46251 . + 0 ID=cds-OFS98482.1;Parent=gene-HMPREF3107_10595;Dbxref=NCBI_GP:OFS98482.1;Name=OFS98482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772410.1;locus_tag=HMPREF3107_10595;product=stringent starvation protein A;protein_id=OFS98482.1;transl_table=11 KV790833.1 Genbank gene 46276 46704 . + . ID=gene-HMPREF3107_10600;Name=HMPREF3107_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10600 KV790833.1 Protein Homology CDS 46276 46704 . + 0 ID=cds-OFS98483.1;Parent=gene-HMPREF3107_10600;Dbxref=NCBI_GP:OFS98483.1;Name=OFS98483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681871.1;locus_tag=HMPREF3107_10600;product=ClpXP protease specificity-enhancing factor;protein_id=OFS98483.1;transl_table=11 KV790833.1 Genbank gene 46798 47775 . + . ID=gene-HMPREF3107_10605;Name=HMPREF3107_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10605 KV790833.1 Protein Homology CDS 46798 47775 . + 0 ID=cds-OFS98484.1;Parent=gene-HMPREF3107_10605;Dbxref=NCBI_GP:OFS98484.1;Name=OFS98484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684768.1;locus_tag=HMPREF3107_10605;product=hypothetical protein;protein_id=OFS98484.1;transl_table=11 KV790833.1 Genbank gene 47852 48259 . - . ID=gene-HMPREF3107_10610;Name=HMPREF3107_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10610 KV790833.1 Protein Homology CDS 47852 48259 . - 0 ID=cds-OFS98485.1;Parent=gene-HMPREF3107_10610;Dbxref=NCBI_GP:OFS98485.1;Name=OFS98485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772405.1;locus_tag=HMPREF3107_10610;product=hypothetical protein;protein_id=OFS98485.1;transl_table=11 KV790833.1 Genbank gene 48370 49269 . - . ID=gene-HMPREF3107_10615;Name=HMPREF3107_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10615 KV790833.1 Protein Homology CDS 48370 49269 . - 0 ID=cds-OFS98486.1;Parent=gene-HMPREF3107_10615;Dbxref=NCBI_GP:OFS98486.1;Name=OFS98486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425527.1;locus_tag=HMPREF3107_10615;product=NAD(P)H-hydrate dehydratase;protein_id=OFS98486.1;transl_table=11 KV790833.1 Genbank gene 49411 50334 . + . ID=gene-HMPREF3107_10620;Name=HMPREF3107_10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10620 KV790833.1 Protein Homology CDS 49411 50334 . + 0 ID=cds-OFS98487.1;Parent=gene-HMPREF3107_10620;Dbxref=NCBI_GP:OFS98487.1;Name=OFS98487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748251.1;locus_tag=HMPREF3107_10620;product=LysR family transcriptional regulator;protein_id=OFS98487.1;transl_table=11 KV790833.1 Genbank gene 50347 51291 . + . ID=gene-HMPREF3107_10625;Name=HMPREF3107_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10625 KV790833.1 Protein Homology CDS 50347 51291 . + 0 ID=cds-OFS98488.1;Parent=gene-HMPREF3107_10625;Dbxref=NCBI_GP:OFS98488.1;Name=OFS98488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772402.1;locus_tag=HMPREF3107_10625;product=ABC transporter ATP-binding protein;protein_id=OFS98488.1;transl_table=11 KV790833.1 Genbank gene 51411 52307 . + . ID=gene-HMPREF3107_10630;Name=HMPREF3107_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10630 KV790833.1 Protein Homology CDS 51411 52307 . + 0 ID=cds-OFS98495.1;Parent=gene-HMPREF3107_10630;Dbxref=NCBI_GP:OFS98495.1;Name=OFS98495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341318.1;locus_tag=HMPREF3107_10630;product=phosphatidylserine decarboxylase;protein_id=OFS98495.1;transl_table=11 KV790833.1 Genbank gene 52399 53118 . - . ID=gene-HMPREF3107_10635;Name=HMPREF3107_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10635 KV790833.1 Protein Homology CDS 52399 53118 . - 0 ID=cds-OFS98489.1;Parent=gene-HMPREF3107_10635;Dbxref=NCBI_GP:OFS98489.1;Name=OFS98489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWH8.1;locus_tag=HMPREF3107_10635;product=UMP kinase;protein_id=OFS98489.1;transl_table=11 KV790833.1 Genbank gene 53270 54517 . - . ID=gene-HMPREF3107_10640;Name=HMPREF3107_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10640 KV790833.1 Protein Homology CDS 53270 54517 . - 0 ID=cds-OFS98490.1;Parent=gene-HMPREF3107_10640;Dbxref=NCBI_GP:OFS98490.1;Name=OFS98490.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753346.1;locus_tag=HMPREF3107_10640;product=beta-ketoacyl-ACP synthase II;protein_id=OFS98490.1;transl_table=11 KV790833.1 Genbank gene 54657 54893 . - . ID=gene-HMPREF3107_10645;Name=HMPREF3107_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10645 KV790833.1 Protein Homology CDS 54657 54893 . - 0 ID=cds-OFS98491.1;Parent=gene-HMPREF3107_10645;Dbxref=NCBI_GP:OFS98491.1;Name=OFS98491.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272337.1;locus_tag=HMPREF3107_10645;product=acyl carrier protein;protein_id=OFS98491.1;transl_table=11 KV790833.1 Genbank gene 55139 57142 . - . ID=gene-HMPREF3107_10650;Name=HMPREF3107_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10650 KV790833.1 Protein Homology CDS 55139 57142 . - 0 ID=cds-OFS98492.1;Parent=gene-HMPREF3107_10650;Dbxref=NCBI_GP:OFS98492.1;Name=OFS98492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772396.1;locus_tag=HMPREF3107_10650;product=prolyl endopeptidase;protein_id=OFS98492.1;transl_table=11 KV790833.1 Genbank gene 57244 57450 . - . ID=gene-HMPREF3107_10655;Name=HMPREF3107_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10655 KV790833.1 GeneMarkS+ CDS 57244 57450 . - 0 ID=cds-OFS98493.1;Parent=gene-HMPREF3107_10655;Dbxref=NCBI_GP:OFS98493.1;Name=OFS98493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10655;product=hypothetical protein;protein_id=OFS98493.1;transl_table=11 KV790833.1 Genbank gene 57520 58041 . - . ID=gene-HMPREF3107_10660;Name=HMPREF3107_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10660 KV790833.1 GeneMarkS+ CDS 57520 58041 . - 0 ID=cds-OFS98494.1;Parent=gene-HMPREF3107_10660;Dbxref=NCBI_GP:OFS98494.1;Name=OFS98494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10660;product=hypothetical protein;protein_id=OFS98494.1;transl_table=11 ##sequence-region KV790834.1 1 3879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790834.1 Genbank region 1 3879 . + . ID=KV790834.1:1..3879;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790834.1 Genbank pseudogene 189 2381 . - . ID=gene-HMPREF3107_10665;Name=HMPREF3107_10665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10665;pseudo=true KV790834.1 Protein Homology CDS 189 2381 . - 0 ID=cds-HMPREF3107_10665;Parent=gene-HMPREF3107_10665;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712412.1;locus_tag=HMPREF3107_10665;product=adhesin;pseudo=true;transl_table=11 KV790834.1 Genbank gene 2401 3375 . + . ID=gene-HMPREF3107_10670;Name=HMPREF3107_10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10670 KV790834.1 GeneMarkS+ CDS 2401 3375 . + 0 ID=cds-OFS98475.1;Parent=gene-HMPREF3107_10670;Dbxref=NCBI_GP:OFS98475.1;Name=OFS98475.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10670;product=hypothetical protein;protein_id=OFS98475.1;transl_table=11 KV790834.1 Genbank gene 3372 3836 . + . ID=gene-HMPREF3107_10675;Name=HMPREF3107_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10675 KV790834.1 Protein Homology CDS 3372 3836 . + 0 ID=cds-OFS98476.1;Parent=gene-HMPREF3107_10675;Dbxref=NCBI_GP:OFS98476.1;Name=OFS98476.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774468.1;locus_tag=HMPREF3107_10675;product=hypothetical protein;protein_id=OFS98476.1;transl_table=11 ##sequence-region KV790835.1 1 100139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790835.1 Genbank region 1 100139 . + . ID=KV790835.1:1..100139;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790835.1 Genbank gene 391 933 . - . ID=gene-HMPREF3107_10680;Name=HMPREF3107_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10680 KV790835.1 Protein Homology CDS 391 933 . - 0 ID=cds-OFS98348.1;Parent=gene-HMPREF3107_10680;Dbxref=NCBI_GP:OFS98348.1;Name=OFS98348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745133.1;locus_tag=HMPREF3107_10680;product=molybdenum ABC transporter ATP-binding protein;protein_id=OFS98348.1;transl_table=11 KV790835.1 Genbank gene 1236 1796 . - . ID=gene-HMPREF3107_10685;Name=HMPREF3107_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10685 KV790835.1 Protein Homology CDS 1236 1796 . - 0 ID=cds-OFS98349.1;Parent=gene-HMPREF3107_10685;Dbxref=NCBI_GP:OFS98349.1;Name=OFS98349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744789.1;locus_tag=HMPREF3107_10685;product=hypothetical protein;protein_id=OFS98349.1;transl_table=11 KV790835.1 Genbank gene 1848 2285 . - . ID=gene-HMPREF3107_10690;Name=HMPREF3107_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10690 KV790835.1 GeneMarkS+ CDS 1848 2285 . - 0 ID=cds-OFS98350.1;Parent=gene-HMPREF3107_10690;Dbxref=NCBI_GP:OFS98350.1;Name=OFS98350.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10690;product=hypothetical protein;protein_id=OFS98350.1;transl_table=11 KV790835.1 Genbank gene 2355 3329 . - . ID=gene-HMPREF3107_10695;Name=HMPREF3107_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10695 KV790835.1 Protein Homology CDS 2355 3329 . - 0 ID=cds-OFS98351.1;Parent=gene-HMPREF3107_10695;Dbxref=NCBI_GP:OFS98351.1;Name=OFS98351.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770623.1;locus_tag=HMPREF3107_10695;product=lipoyl synthase;protein_id=OFS98351.1;transl_table=11 KV790835.1 Genbank gene 3326 3946 . - . ID=gene-HMPREF3107_10700;Name=HMPREF3107_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10700 KV790835.1 Protein Homology CDS 3326 3946 . - 0 ID=cds-OFS98352.1;Parent=gene-HMPREF3107_10700;Dbxref=NCBI_GP:OFS98352.1;Name=OFS98352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770625.1;locus_tag=HMPREF3107_10700;product=octanoyltransferase;protein_id=OFS98352.1;transl_table=11 KV790835.1 Genbank gene 3946 4215 . - . ID=gene-HMPREF3107_10705;Name=HMPREF3107_10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10705 KV790835.1 Protein Homology CDS 3946 4215 . - 0 ID=cds-OFS98353.1;Parent=gene-HMPREF3107_10705;Dbxref=NCBI_GP:OFS98353.1;Name=OFS98353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675413.1;locus_tag=HMPREF3107_10705;product=hypothetical protein;protein_id=OFS98353.1;transl_table=11 KV790835.1 Genbank gene 4409 6844 . + . ID=gene-HMPREF3107_10710;Name=HMPREF3107_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10710 KV790835.1 Protein Homology CDS 4409 6844 . + 0 ID=cds-OFS98354.1;Parent=gene-HMPREF3107_10710;Dbxref=NCBI_GP:OFS98354.1;Name=OFS98354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284328.1;locus_tag=HMPREF3107_10710;product=endopeptidase La;protein_id=OFS98354.1;transl_table=11 KV790835.1 Genbank gene 7036 7305 . + . ID=gene-HMPREF3107_10715;Name=HMPREF3107_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10715 KV790835.1 Protein Homology CDS 7036 7305 . + 0 ID=cds-OFS98355.1;Parent=gene-HMPREF3107_10715;Dbxref=NCBI_GP:OFS98355.1;Name=OFS98355.1;Note=histone-like DNA-binding protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342959.1;locus_tag=HMPREF3107_10715;product=DNA-binding protein HU;protein_id=OFS98355.1;transl_table=11 KV790835.1 Genbank gene 7366 7878 . - . ID=gene-HMPREF3107_10720;Name=HMPREF3107_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10720 KV790835.1 Protein Homology CDS 7366 7878 . - 0 ID=cds-OFS98356.1;Parent=gene-HMPREF3107_10720;Dbxref=NCBI_GP:OFS98356.1;Name=OFS98356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770635.1;locus_tag=HMPREF3107_10720;product=hypothetical protein;protein_id=OFS98356.1;transl_table=11 KV790835.1 Genbank gene 7888 8202 . - . ID=gene-HMPREF3107_10725;Name=HMPREF3107_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10725 KV790835.1 Protein Homology CDS 7888 8202 . - 0 ID=cds-OFS98362.1;Parent=gene-HMPREF3107_10725;Dbxref=NCBI_GP:OFS98362.1;Name=OFS98362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q2SKK6.1;locus_tag=HMPREF3107_10725;product=hypothetical protein;protein_id=OFS98362.1;transl_table=11 KV790835.1 Genbank gene 8305 8505 . - . ID=gene-HMPREF3107_10730;Name=HMPREF3107_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10730 KV790835.1 Protein Homology CDS 8305 8505 . - 0 ID=cds-OFS98363.1;Parent=gene-HMPREF3107_10730;Dbxref=NCBI_GP:OFS98363.1;Name=OFS98363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759971.1;locus_tag=HMPREF3107_10730;product=hypothetical protein;protein_id=OFS98363.1;transl_table=11 KV790835.1 Genbank gene 8735 9271 . + . ID=gene-HMPREF3107_10735;Name=HMPREF3107_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10735 KV790835.1 Protein Homology CDS 8735 9271 . + 0 ID=cds-OFS98357.1;Parent=gene-HMPREF3107_10735;Dbxref=NCBI_GP:OFS98357.1;Name=OFS98357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765419.1;locus_tag=HMPREF3107_10735;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=OFS98357.1;transl_table=11 KV790835.1 Genbank gene 9306 11087 . + . ID=gene-HMPREF3107_10740;Name=HMPREF3107_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10740 KV790835.1 Protein Homology CDS 9306 11087 . + 0 ID=cds-OFS98358.1;Parent=gene-HMPREF3107_10740;Dbxref=NCBI_GP:OFS98358.1;Name=OFS98358.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679031.1;locus_tag=HMPREF3107_10740;product=ribonucleoside-triphosphate reductase;protein_id=OFS98358.1;transl_table=11 KV790835.1 Genbank gene 11153 11395 . - . ID=gene-HMPREF3107_10745;Name=HMPREF3107_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10745 KV790835.1 GeneMarkS+ CDS 11153 11395 . - 0 ID=cds-OFS98359.1;Parent=gene-HMPREF3107_10745;Dbxref=NCBI_GP:OFS98359.1;Name=OFS98359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10745;product=hypothetical protein;protein_id=OFS98359.1;transl_table=11 KV790835.1 Genbank gene 11385 12155 . + . ID=gene-HMPREF3107_10750;Name=HMPREF3107_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10750 KV790835.1 Protein Homology CDS 11385 12155 . + 0 ID=cds-OFS98360.1;Parent=gene-HMPREF3107_10750;Dbxref=NCBI_GP:OFS98360.1;Name=OFS98360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425166.1;locus_tag=HMPREF3107_10750;product=DeoR family transcriptional regulator;protein_id=OFS98360.1;transl_table=11 KV790835.1 Genbank gene 12184 12648 . + . ID=gene-HMPREF3107_10755;Name=HMPREF3107_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10755 KV790835.1 Protein Homology CDS 12184 12648 . + 0 ID=cds-OFS98361.1;Parent=gene-HMPREF3107_10755;Dbxref=NCBI_GP:OFS98361.1;Name=OFS98361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284067.1;locus_tag=HMPREF3107_10755;product=hypothetical protein;protein_id=OFS98361.1;transl_table=11 KV790835.1 Genbank gene 12883 13332 . - . ID=gene-HMPREF3107_10760;Name=HMPREF3107_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10760 KV790835.1 Protein Homology CDS 12883 13332 . - 0 ID=cds-OFS98261.1;Parent=gene-HMPREF3107_10760;Dbxref=NCBI_GP:OFS98261.1;Name=OFS98261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770654.1;locus_tag=HMPREF3107_10760;product=dihydroneopterin triphosphate diphosphatase;protein_id=OFS98261.1;transl_table=11 KV790835.1 Genbank gene 13322 14773 . - . ID=gene-HMPREF3107_10765;Name=HMPREF3107_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10765 KV790835.1 Protein Homology CDS 13322 14773 . - 0 ID=cds-OFS98262.1;Parent=gene-HMPREF3107_10765;Dbxref=NCBI_GP:OFS98262.1;Name=OFS98262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019390452.1;locus_tag=HMPREF3107_10765;product=hypothetical protein;protein_id=OFS98262.1;transl_table=11 KV790835.1 Genbank gene 14881 15519 . + . ID=gene-HMPREF3107_10770;Name=HMPREF3107_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10770 KV790835.1 Protein Homology CDS 14881 15519 . + 0 ID=cds-OFS98282.1;Parent=gene-HMPREF3107_10770;Dbxref=NCBI_GP:OFS98282.1;Name=OFS98282.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758507.1;locus_tag=HMPREF3107_10770;product=hypothetical protein;protein_id=OFS98282.1;transl_table=11 KV790835.1 Genbank gene 15676 17718 . - . ID=gene-HMPREF3107_10775;Name=HMPREF3107_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10775 KV790835.1 Protein Homology CDS 15676 17718 . - 0 ID=cds-OFS98283.1;Parent=gene-HMPREF3107_10775;Dbxref=NCBI_GP:OFS98283.1;Name=OFS98283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003797011.1;locus_tag=HMPREF3107_10775;product=TonB-dependent receptor;protein_id=OFS98283.1;transl_table=11 KV790835.1 Genbank gene 18119 19750 . - . ID=gene-HMPREF3107_10780;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HMPREF3107_10780 KV790835.1 Protein Homology CDS 18119 19750 . - 0 ID=cds-OFS98263.1;Parent=gene-HMPREF3107_10780;Dbxref=NCBI_GP:OFS98263.1;Name=OFS98263.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770668.1;locus_tag=HMPREF3107_10780;product=CTP synthetase;protein_id=OFS98263.1;transl_table=11 KV790835.1 Genbank gene 19868 21676 . - . ID=gene-HMPREF3107_10785;Name=HMPREF3107_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10785 KV790835.1 Protein Homology CDS 19868 21676 . - 0 ID=cds-OFS98264.1;Parent=gene-HMPREF3107_10785;Dbxref=NCBI_GP:OFS98264.1;Name=OFS98264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284696.1;locus_tag=HMPREF3107_10785;product=dihydrolipoamide dehydrogenase;protein_id=OFS98264.1;transl_table=11 KV790835.1 Genbank gene 21731 21988 . - . ID=gene-HMPREF3107_10790;Name=HMPREF3107_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10790 KV790835.1 Protein Homology CDS 21731 21988 . - 0 ID=cds-OFS98265.1;Parent=gene-HMPREF3107_10790;Dbxref=NCBI_GP:OFS98265.1;Name=OFS98265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342752.1;locus_tag=HMPREF3107_10790;product=hypothetical protein;protein_id=OFS98265.1;transl_table=11 KV790835.1 Genbank gene 22081 23715 . - . ID=gene-HMPREF3107_10795;Name=HMPREF3107_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10795 KV790835.1 Protein Homology CDS 22081 23715 . - 0 ID=cds-OFS98266.1;Parent=gene-HMPREF3107_10795;Dbxref=NCBI_GP:OFS98266.1;Name=OFS98266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311778.1;locus_tag=HMPREF3107_10795;product=dihydrolipoamide acetyltransferase;protein_id=OFS98266.1;transl_table=11 KV790835.1 Genbank gene 23833 26502 . - . ID=gene-HMPREF3107_10800;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=HMPREF3107_10800 KV790835.1 Protein Homology CDS 23833 26502 . - 0 ID=cds-OFS98267.1;Parent=gene-HMPREF3107_10800;Dbxref=NCBI_GP:OFS98267.1;Name=OFS98267.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173178.1;locus_tag=HMPREF3107_10800;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=OFS98267.1;transl_table=11 KV790835.1 Genbank gene 26945 27577 . - . ID=gene-HMPREF3107_10805;Name=HMPREF3107_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10805 KV790835.1 Protein Homology CDS 26945 27577 . - 0 ID=cds-OFS98284.1;Parent=gene-HMPREF3107_10805;Dbxref=NCBI_GP:OFS98284.1;Name=OFS98284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770084.1;locus_tag=HMPREF3107_10805;product=DNA mismatch repair protein MutS;protein_id=OFS98284.1;transl_table=11 KV790835.1 Genbank gene 27716 28609 . - . ID=gene-HMPREF3107_10810;Name=HMPREF3107_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10810 KV790835.1 Protein Homology CDS 27716 28609 . - 0 ID=cds-OFS98268.1;Parent=gene-HMPREF3107_10810;Dbxref=NCBI_GP:OFS98268.1;Name=OFS98268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426942.1;locus_tag=HMPREF3107_10810;product=polyamine ABC transporter permease;protein_id=OFS98268.1;transl_table=11 KV790835.1 Genbank gene 28602 29576 . - . ID=gene-HMPREF3107_10815;Name=HMPREF3107_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10815 KV790835.1 Protein Homology CDS 28602 29576 . - 0 ID=cds-OFS98269.1;Parent=gene-HMPREF3107_10815;Dbxref=NCBI_GP:OFS98269.1;Name=OFS98269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770086.1;locus_tag=HMPREF3107_10815;product=putrescine/spermidine ABC transporter permease;protein_id=OFS98269.1;transl_table=11 KV790835.1 Genbank gene 29590 30708 . - . ID=gene-HMPREF3107_10820;Name=HMPREF3107_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10820 KV790835.1 Protein Homology CDS 29590 30708 . - 0 ID=cds-OFS98270.1;Parent=gene-HMPREF3107_10820;Dbxref=NCBI_GP:OFS98270.1;Name=OFS98270.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116668.1;locus_tag=HMPREF3107_10820;product=transporter;protein_id=OFS98270.1;transl_table=11 KV790835.1 Genbank gene 31152 31811 . - . ID=gene-HMPREF3107_10825;Name=HMPREF3107_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10825 KV790835.1 Protein Homology CDS 31152 31811 . - 0 ID=cds-OFS98271.1;Parent=gene-HMPREF3107_10825;Dbxref=NCBI_GP:OFS98271.1;Name=OFS98271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815312.1;locus_tag=HMPREF3107_10825;product=7-cyano-7-deazaguanine synthase QueC;protein_id=OFS98271.1;transl_table=11 KV790835.1 Genbank gene 32380 32961 . + . ID=gene-HMPREF3107_10830;Name=HMPREF3107_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10830 KV790835.1 Protein Homology CDS 32380 32961 . + 0 ID=cds-OFS98272.1;Parent=gene-HMPREF3107_10830;Dbxref=NCBI_GP:OFS98272.1;Name=OFS98272.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019957326.1;locus_tag=HMPREF3107_10830;product=superoxide dismutase;protein_id=OFS98272.1;transl_table=11 KV790835.1 Genbank gene 33034 33699 . - . ID=gene-HMPREF3107_10835;Name=HMPREF3107_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10835 KV790835.1 Protein Homology CDS 33034 33699 . - 0 ID=cds-OFS98273.1;Parent=gene-HMPREF3107_10835;Dbxref=NCBI_GP:OFS98273.1;Name=OFS98273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770094.1;locus_tag=HMPREF3107_10835;product=phosphoglycolate phosphatase;protein_id=OFS98273.1;transl_table=11 KV790835.1 Genbank gene 33766 34443 . - . ID=gene-HMPREF3107_10840;Name=HMPREF3107_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10840 KV790835.1 Protein Homology CDS 33766 34443 . - 0 ID=cds-OFS98274.1;Parent=gene-HMPREF3107_10840;Dbxref=NCBI_GP:OFS98274.1;Name=OFS98274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770095.1;locus_tag=HMPREF3107_10840;product=hypothetical protein;protein_id=OFS98274.1;transl_table=11 KV790835.1 Genbank gene 34440 34913 . - . ID=gene-HMPREF3107_10845;Name=HMPREF3107_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10845 KV790835.1 Protein Homology CDS 34440 34913 . - 0 ID=cds-OFS98275.1;Parent=gene-HMPREF3107_10845;Dbxref=NCBI_GP:OFS98275.1;Name=OFS98275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003791471.1;locus_tag=HMPREF3107_10845;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=OFS98275.1;transl_table=11 KV790835.1 cmsearch binding_site 34918 34962 . - . ID=id-KV790835.1:34918..34962;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV790835.1 Genbank gene 35517 37115 . + . ID=gene-HMPREF3107_10850;Name=HMPREF3107_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10850 KV790835.1 Protein Homology CDS 35517 37115 . + 0 ID=cds-OFS98276.1;Parent=gene-HMPREF3107_10850;Dbxref=NCBI_GP:OFS98276.1;Name=OFS98276.1;Note=Catalyzes the first step in the glyoxalate cycle%2C which converts lipids to carbohydrates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003298816.1;locus_tag=HMPREF3107_10850;product=isocitrate lyase;protein_id=OFS98276.1;transl_table=11 KV790835.1 Genbank gene 37375 37605 . - . ID=gene-HMPREF3107_10855;Name=HMPREF3107_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10855 KV790835.1 Protein Homology CDS 37375 37605 . - 0 ID=cds-OFS98277.1;Parent=gene-HMPREF3107_10855;Dbxref=NCBI_GP:OFS98277.1;Name=OFS98277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227488.1;locus_tag=HMPREF3107_10855;product=glutaredoxin;protein_id=OFS98277.1;transl_table=11 KV790835.1 Genbank gene 37724 38857 . + . ID=gene-HMPREF3107_10860;Name=HMPREF3107_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10860 KV790835.1 Protein Homology CDS 37724 38857 . + 0 ID=cds-OFS98278.1;Parent=gene-HMPREF3107_10860;Dbxref=NCBI_GP:OFS98278.1;Name=OFS98278.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269980.1;locus_tag=HMPREF3107_10860;product=hypothetical protein;protein_id=OFS98278.1;transl_table=11 KV790835.1 Genbank gene 38939 39817 . + . ID=gene-HMPREF3107_10865;Name=HMPREF3107_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10865 KV790835.1 Protein Homology CDS 38939 39817 . + 0 ID=cds-OFS98279.1;Parent=gene-HMPREF3107_10865;Dbxref=NCBI_GP:OFS98279.1;Name=OFS98279.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448957.1;locus_tag=HMPREF3107_10865;product=hypothetical protein;protein_id=OFS98279.1;transl_table=11 KV790835.1 Genbank gene 40049 40678 . - . ID=gene-HMPREF3107_10870;Name=HMPREF3107_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10870 KV790835.1 Protein Homology CDS 40049 40678 . - 0 ID=cds-OFS98280.1;Parent=gene-HMPREF3107_10870;Dbxref=NCBI_GP:OFS98280.1;Name=OFS98280.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824867.1;locus_tag=HMPREF3107_10870;product=hypothetical protein;protein_id=OFS98280.1;transl_table=11 KV790835.1 Genbank gene 40724 41323 . - . ID=gene-HMPREF3107_10875;Name=HMPREF3107_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10875 KV790835.1 Protein Homology CDS 40724 41323 . - 0 ID=cds-OFS98281.1;Parent=gene-HMPREF3107_10875;Dbxref=NCBI_GP:OFS98281.1;Name=OFS98281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174814.1;locus_tag=HMPREF3107_10875;product=CDP-alcohol phosphatidyltransferase;protein_id=OFS98281.1;transl_table=11 KV790835.1 Genbank gene 41551 42069 . + . ID=gene-HMPREF3107_10880;Name=HMPREF3107_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10880 KV790835.1 Protein Homology CDS 41551 42069 . + 0 ID=cds-OFS98182.1;Parent=gene-HMPREF3107_10880;Dbxref=NCBI_GP:OFS98182.1;Name=OFS98182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273148.1;locus_tag=HMPREF3107_10880;product=hypothetical protein;protein_id=OFS98182.1;transl_table=11 KV790835.1 Genbank gene 42199 43494 . - . ID=gene-HMPREF3107_10885;Name=HMPREF3107_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10885 KV790835.1 Protein Homology CDS 42199 43494 . - 0 ID=cds-OFS98183.1;Parent=gene-HMPREF3107_10885;Dbxref=NCBI_GP:OFS98183.1;Name=OFS98183.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271936.1;locus_tag=HMPREF3107_10885;product=adenylosuccinate synthase;protein_id=OFS98183.1;transl_table=11 KV790835.1 Genbank gene 43604 44758 . - . ID=gene-HMPREF3107_10890;Name=hisZ;gbkey=Gene;gene=hisZ;gene_biotype=protein_coding;locus_tag=HMPREF3107_10890 KV790835.1 Protein Homology CDS 43604 44758 . - 0 ID=cds-OFS98184.1;Parent=gene-HMPREF3107_10890;Dbxref=NCBI_GP:OFS98184.1;Name=OFS98184.1;Note=May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine;gbkey=CDS;gene=hisZ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770115.1;locus_tag=HMPREF3107_10890;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=OFS98184.1;transl_table=11 KV790835.1 Genbank gene 44914 45933 . - . ID=gene-HMPREF3107_10895;Name=HMPREF3107_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10895 KV790835.1 Protein Homology CDS 44914 45933 . - 0 ID=cds-OFS98185.1;Parent=gene-HMPREF3107_10895;Dbxref=NCBI_GP:OFS98185.1;Name=OFS98185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174013.1;locus_tag=HMPREF3107_10895;product=lipopolysaccharide heptosyltransferase II;protein_id=OFS98185.1;transl_table=11 KV790835.1 Genbank gene 46164 46985 . + . ID=gene-HMPREF3107_10900;Name=HMPREF3107_10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10900 KV790835.1 GeneMarkS+ CDS 46164 46985 . + 0 ID=cds-OFS98186.1;Parent=gene-HMPREF3107_10900;Dbxref=NCBI_GP:OFS98186.1;Name=OFS98186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_10900;product=hypothetical protein;protein_id=OFS98186.1;transl_table=11 KV790835.1 Genbank gene 47056 47250 . - . ID=gene-HMPREF3107_10905;Name=HMPREF3107_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10905 KV790835.1 Protein Homology CDS 47056 47250 . - 0 ID=cds-OFS98187.1;Parent=gene-HMPREF3107_10905;Dbxref=NCBI_GP:OFS98187.1;Name=OFS98187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686023.1;locus_tag=HMPREF3107_10905;product=hypothetical protein;protein_id=OFS98187.1;transl_table=11 KV790835.1 Genbank gene 47383 48426 . + . ID=gene-HMPREF3107_10910;Name=HMPREF3107_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10910 KV790835.1 Protein Homology CDS 47383 48426 . + 0 ID=cds-OFS98188.1;Parent=gene-HMPREF3107_10910;Dbxref=NCBI_GP:OFS98188.1;Name=OFS98188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770125.1;locus_tag=HMPREF3107_10910;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=OFS98188.1;transl_table=11 KV790835.1 Genbank gene 48483 49136 . - . ID=gene-HMPREF3107_10915;Name=HMPREF3107_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10915 KV790835.1 Protein Homology CDS 48483 49136 . - 0 ID=cds-OFS98189.1;Parent=gene-HMPREF3107_10915;Dbxref=NCBI_GP:OFS98189.1;Name=OFS98189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770126.1;locus_tag=HMPREF3107_10915;product=nickel-dependent hydrogenase b-type cytochrome subunit;protein_id=OFS98189.1;transl_table=11 KV790835.1 Genbank gene 49226 50083 . - . ID=gene-HMPREF3107_10920;Name=HMPREF3107_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10920 KV790835.1 Protein Homology CDS 49226 50083 . - 0 ID=cds-OFS98190.1;Parent=gene-HMPREF3107_10920;Dbxref=NCBI_GP:OFS98190.1;Name=OFS98190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678779.1;locus_tag=HMPREF3107_10920;product=hypothetical protein;protein_id=OFS98190.1;transl_table=11 KV790835.1 Genbank gene 50196 50924 . + . ID=gene-HMPREF3107_10925;Name=HMPREF3107_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10925 KV790835.1 Protein Homology CDS 50196 50924 . + 0 ID=cds-OFS98191.1;Parent=gene-HMPREF3107_10925;Dbxref=NCBI_GP:OFS98191.1;Name=OFS98191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311341.1;locus_tag=HMPREF3107_10925;product=ribonuclease PH;protein_id=OFS98191.1;transl_table=11 KV790835.1 Genbank gene 50938 51498 . + . ID=gene-HMPREF3107_10930;Name=HMPREF3107_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10930 KV790835.1 Protein Homology CDS 50938 51498 . + 0 ID=cds-OFS98192.1;Parent=gene-HMPREF3107_10930;Dbxref=NCBI_GP:OFS98192.1;Name=OFS98192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770133.1;locus_tag=HMPREF3107_10930;product=pseudouridine synthase;protein_id=OFS98192.1;transl_table=11 KV790835.1 Genbank gene 51816 52640 . + . ID=gene-HMPREF3107_10935;Name=HMPREF3107_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10935 KV790835.1 Protein Homology CDS 51816 52640 . + 0 ID=cds-OFS98193.1;Parent=gene-HMPREF3107_10935;Dbxref=NCBI_GP:OFS98193.1;Name=OFS98193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003782976.1;locus_tag=HMPREF3107_10935;product=proline/glycine betaine ABC transporter ATP-binding protein;protein_id=OFS98193.1;transl_table=11 KV790835.1 Genbank gene 52742 54259 . + . ID=gene-HMPREF3107_10940;Name=HMPREF3107_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10940 KV790835.1 Protein Homology CDS 52742 54259 . + 0 ID=cds-OFS98194.1;Parent=gene-HMPREF3107_10940;Dbxref=NCBI_GP:OFS98194.1;Name=OFS98194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700794.1;locus_tag=HMPREF3107_10940;product=glycine/betaine ABC transporter permease;protein_id=OFS98194.1;transl_table=11 KV790835.1 Genbank pseudogene 54928 55566 . + . ID=gene-HMPREF3107_10945;Name=HMPREF3107_10945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_10945;pseudo=true KV790835.1 Protein Homology CDS 54928 55566 . + 0 ID=cds-HMPREF3107_10945;Parent=gene-HMPREF3107_10945;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312122.1;locus_tag=HMPREF3107_10945;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 KV790835.1 Genbank gene 55714 57111 . - . ID=gene-HMPREF3107_10950;Name=HMPREF3107_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10950 KV790835.1 Protein Homology CDS 55714 57111 . - 0 ID=cds-OFS98195.1;Parent=gene-HMPREF3107_10950;Dbxref=NCBI_GP:OFS98195.1;Name=OFS98195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770148.1;locus_tag=HMPREF3107_10950;product=sirohydrochlorin ferrochelatase;protein_id=OFS98195.1;transl_table=11 KV790835.1 Genbank gene 57313 58878 . + . ID=gene-HMPREF3107_10955;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF3107_10955 KV790835.1 Protein Homology CDS 57313 58878 . + 0 ID=cds-OFS98196.1;Parent=gene-HMPREF3107_10955;Dbxref=NCBI_GP:OFS98196.1;Name=OFS98196.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221566.1;locus_tag=HMPREF3107_10955;product=glutamine-hydrolyzing GMP synthase;protein_id=OFS98196.1;transl_table=11 KV790835.1 Genbank gene 59009 60514 . + . ID=gene-HMPREF3107_10960;Name=HMPREF3107_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10960 KV790835.1 Protein Homology CDS 59009 60514 . + 0 ID=cds-OFS98197.1;Parent=gene-HMPREF3107_10960;Dbxref=NCBI_GP:OFS98197.1;Name=OFS98197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770151.1;locus_tag=HMPREF3107_10960;product=exopolyphosphatase;protein_id=OFS98197.1;transl_table=11 KV790835.1 Genbank gene 60524 61195 . + . ID=gene-HMPREF3107_10965;Name=HMPREF3107_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10965 KV790835.1 Protein Homology CDS 60524 61195 . + 0 ID=cds-OFS98198.1;Parent=gene-HMPREF3107_10965;Dbxref=NCBI_GP:OFS98198.1;Name=OFS98198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770153.1;locus_tag=HMPREF3107_10965;product=hypothetical protein;protein_id=OFS98198.1;transl_table=11 KV790835.1 Genbank gene 61447 61659 . + . ID=gene-HMPREF3107_10970;Name=HMPREF3107_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10970 KV790835.1 Protein Homology CDS 61447 61659 . + 0 ID=cds-OFS98199.1;Parent=gene-HMPREF3107_10970;Dbxref=NCBI_GP:OFS98199.1;Name=OFS98199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66519.1;locus_tag=HMPREF3107_10970;product=30S ribosomal protein S21;protein_id=OFS98199.1;transl_table=11 KV790835.1 Genbank gene 61757 62203 . + . ID=gene-HMPREF3107_10975;Name=HMPREF3107_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10975 KV790835.1 Protein Homology CDS 61757 62203 . + 0 ID=cds-OFS98200.1;Parent=gene-HMPREF3107_10975;Dbxref=NCBI_GP:OFS98200.1;Name=OFS98200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770159.1;locus_tag=HMPREF3107_10975;product=glutamyl-tRNA amidotransferase;protein_id=OFS98200.1;transl_table=11 KV790835.1 Genbank gene 62214 62555 . + . ID=gene-HMPREF3107_10980;Name=HMPREF3107_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10980 KV790835.1 Protein Homology CDS 62214 62555 . + 0 ID=cds-OFS98201.1;Parent=gene-HMPREF3107_10980;Dbxref=NCBI_GP:OFS98201.1;Name=OFS98201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770161.1;locus_tag=HMPREF3107_10980;product=hypothetical protein;protein_id=OFS98201.1;transl_table=11 KV790835.1 Genbank gene 62854 63879 . - . ID=gene-HMPREF3107_10985;Name=HMPREF3107_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10985 KV790835.1 Protein Homology CDS 62854 63879 . - 0 ID=cds-OFS98202.1;Parent=gene-HMPREF3107_10985;Dbxref=NCBI_GP:OFS98202.1;Name=OFS98202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311609.1;locus_tag=HMPREF3107_10985;product=hypothetical protein;protein_id=OFS98202.1;transl_table=11 KV790835.1 Genbank gene 64282 65088 . - . ID=gene-HMPREF3107_10990;Name=HMPREF3107_10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10990 KV790835.1 Protein Homology CDS 64282 65088 . - 0 ID=cds-OFS98203.1;Parent=gene-HMPREF3107_10990;Dbxref=NCBI_GP:OFS98203.1;Name=OFS98203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575297.1;locus_tag=HMPREF3107_10990;product=phosphoribosylglycinamide formyltransferase;protein_id=OFS98203.1;transl_table=11 KV790835.1 Genbank gene 65219 65671 . + . ID=gene-HMPREF3107_10995;Name=HMPREF3107_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_10995 KV790835.1 Protein Homology CDS 65219 65671 . + 0 ID=cds-OFS98204.1;Parent=gene-HMPREF3107_10995;Dbxref=NCBI_GP:OFS98204.1;Name=OFS98204.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680707.1;locus_tag=HMPREF3107_10995;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=OFS98204.1;transl_table=11 KV790835.1 Genbank gene 65850 66272 . - . ID=gene-HMPREF3107_11000;Name=HMPREF3107_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11000 KV790835.1 Protein Homology CDS 65850 66272 . - 0 ID=cds-OFS98205.1;Parent=gene-HMPREF3107_11000;Dbxref=NCBI_GP:OFS98205.1;Name=OFS98205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770172.1;locus_tag=HMPREF3107_11000;product=hypothetical protein;protein_id=OFS98205.1;transl_table=11 KV790835.1 Genbank gene 66389 66835 . + . ID=gene-HMPREF3107_11005;Name=HMPREF3107_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11005 KV790835.1 Protein Homology CDS 66389 66835 . + 0 ID=cds-OFS98206.1;Parent=gene-HMPREF3107_11005;Dbxref=NCBI_GP:OFS98206.1;Name=OFS98206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273200.1;locus_tag=HMPREF3107_11005;product=SsrA-binding protein;protein_id=OFS98206.1;transl_table=11 KV790835.1 Genbank gene 66909 67397 . - . ID=gene-HMPREF3107_11010;Name=HMPREF3107_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11010 KV790835.1 Protein Homology CDS 66909 67397 . - 0 ID=cds-OFS98207.1;Parent=gene-HMPREF3107_11010;Dbxref=NCBI_GP:OFS98207.1;Name=OFS98207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770175.1;locus_tag=HMPREF3107_11010;product=dihydrofolate reductase;protein_id=OFS98207.1;transl_table=11 KV790835.1 Genbank gene 67562 68020 . + . ID=gene-HMPREF3107_11015;Name=HMPREF3107_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11015 KV790835.1 Protein Homology CDS 67562 68020 . + 0 ID=cds-OFS98208.1;Parent=gene-HMPREF3107_11015;Dbxref=NCBI_GP:OFS98208.1;Name=OFS98208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770176.1;locus_tag=HMPREF3107_11015;product=cation uptake regulator;protein_id=OFS98208.1;transl_table=11 KV790835.1 Genbank gene 68011 68934 . + . ID=gene-HMPREF3107_11020;Name=HMPREF3107_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11020 KV790835.1 Protein Homology CDS 68011 68934 . + 0 ID=cds-OFS98209.1;Parent=gene-HMPREF3107_11020;Dbxref=NCBI_GP:OFS98209.1;Name=OFS98209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425265.1;locus_tag=HMPREF3107_11020;product=cobalamin biosynthesis protein CobW;protein_id=OFS98209.1;transl_table=11 KV790835.1 Genbank pseudogene 69094 70387 . + . ID=gene-HMPREF3107_11025;Name=HMPREF3107_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_11025;pseudo=true KV790835.1 Protein Homology CDS 69094 70387 . + 0 ID=cds-HMPREF3107_11025;Parent=gene-HMPREF3107_11025;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312068.1;locus_tag=HMPREF3107_11025;product=hypothetical protein;pseudo=true;transl_table=11 KV790835.1 Genbank gene 70446 70838 . + . ID=gene-HMPREF3107_11030;Name=HMPREF3107_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11030 KV790835.1 GeneMarkS+ CDS 70446 70838 . + 0 ID=cds-OFS98210.1;Parent=gene-HMPREF3107_11030;Dbxref=NCBI_GP:OFS98210.1;Name=OFS98210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11030;product=hypothetical protein;protein_id=OFS98210.1;transl_table=11 KV790835.1 Genbank gene 70922 71158 . + . ID=gene-HMPREF3107_11035;Name=HMPREF3107_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11035 KV790835.1 Protein Homology CDS 70922 71158 . + 0 ID=cds-OFS98211.1;Parent=gene-HMPREF3107_11035;Dbxref=NCBI_GP:OFS98211.1;Name=OFS98211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679538.1;locus_tag=HMPREF3107_11035;product=transposase;protein_id=OFS98211.1;transl_table=11 KV790835.1 Genbank gene 71447 72991 . - . ID=gene-HMPREF3107_11040;Name=HMPREF3107_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11040 KV790835.1 Protein Homology CDS 71447 72991 . - 0 ID=cds-OFS98212.1;Parent=gene-HMPREF3107_11040;Dbxref=NCBI_GP:OFS98212.1;Name=OFS98212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272129.1;locus_tag=HMPREF3107_11040;product=L-aspartate oxidase;protein_id=OFS98212.1;transl_table=11 KV790835.1 Genbank gene 73040 73375 . - . ID=gene-HMPREF3107_11045;Name=HMPREF3107_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11045 KV790835.1 Protein Homology CDS 73040 73375 . - 0 ID=cds-OFS98213.1;Parent=gene-HMPREF3107_11045;Dbxref=NCBI_GP:OFS98213.1;Name=OFS98213.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222011.1;locus_tag=HMPREF3107_11045;product=transporter;protein_id=OFS98213.1;transl_table=11 KV790835.1 Genbank gene 73526 74638 . - . ID=gene-HMPREF3107_11050;Name=HMPREF3107_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11050 KV790835.1 Protein Homology CDS 73526 74638 . - 0 ID=cds-OFS98214.1;Parent=gene-HMPREF3107_11050;Dbxref=NCBI_GP:OFS98214.1;Name=OFS98214.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687379.1;locus_tag=HMPREF3107_11050;product=quinolinate synthase;protein_id=OFS98214.1;transl_table=11 KV790835.1 Genbank gene 74841 75779 . + . ID=gene-HMPREF3107_11055;Name=HMPREF3107_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11055 KV790835.1 Protein Homology CDS 74841 75779 . + 0 ID=cds-OFS98215.1;Parent=gene-HMPREF3107_11055;Dbxref=NCBI_GP:OFS98215.1;Name=OFS98215.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222013.1;locus_tag=HMPREF3107_11055;product=hypothetical protein;protein_id=OFS98215.1;transl_table=11 KV790835.1 Genbank gene 75934 76815 . + . ID=gene-HMPREF3107_11060;Name=HMPREF3107_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11060 KV790835.1 Protein Homology CDS 75934 76815 . + 0 ID=cds-OFS98117.1;Parent=gene-HMPREF3107_11060;Dbxref=NCBI_GP:OFS98117.1;Name=OFS98117.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686333.1;locus_tag=HMPREF3107_11060;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=OFS98117.1;transl_table=11 KV790835.1 Genbank gene 77122 78798 . + . ID=gene-HMPREF3107_11065;Name=HMPREF3107_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11065 KV790835.1 Protein Homology CDS 77122 78798 . + 0 ID=cds-OFS98118.1;Parent=gene-HMPREF3107_11065;Dbxref=NCBI_GP:OFS98118.1;Name=OFS98118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232796.1;locus_tag=HMPREF3107_11065;product=energy-dependent translational throttle protein EttA;protein_id=OFS98118.1;transl_table=11 KV790835.1 Genbank pseudogene 78897 83228 . + . ID=gene-HMPREF3107_11070;Name=HMPREF3107_11070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_11070;pseudo=true KV790835.1 Protein Homology CDS 78897 83228 . + 0 ID=cds-HMPREF3107_11070;Parent=gene-HMPREF3107_11070;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116004.1;locus_tag=HMPREF3107_11070;product=damage-inducible protein;pseudo=true;transl_table=11 KV790835.1 Genbank gene 83522 84256 . + . ID=gene-HMPREF3107_11075;Name=HMPREF3107_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11075 KV790835.1 GeneMarkS+ CDS 83522 84256 . + 0 ID=cds-OFS98119.1;Parent=gene-HMPREF3107_11075;Dbxref=NCBI_GP:OFS98119.1;Name=OFS98119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11075;product=hypothetical protein;protein_id=OFS98119.1;transl_table=11 KV790835.1 Genbank gene 84485 85006 . + . ID=gene-HMPREF3107_11080;Name=HMPREF3107_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11080 KV790835.1 Protein Homology CDS 84485 85006 . + 0 ID=cds-OFS98135.1;Parent=gene-HMPREF3107_11080;Dbxref=NCBI_GP:OFS98135.1;Name=OFS98135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342072.1;locus_tag=HMPREF3107_11080;product=hypothetical protein;protein_id=OFS98135.1;transl_table=11 KV790835.1 Genbank gene 85088 86179 . + . ID=gene-HMPREF3107_11085;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF3107_11085 KV790835.1 Protein Homology CDS 85088 86179 . + 0 ID=cds-OFS98136.1;Parent=gene-HMPREF3107_11085;Dbxref=NCBI_GP:OFS98136.1;Name=OFS98136.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642527.1;locus_tag=HMPREF3107_11085;product=redox-regulated ATPase YchF;protein_id=OFS98136.1;transl_table=11 KV790835.1 Genbank gene 86254 87696 . + . ID=gene-HMPREF3107_11090;Name=HMPREF3107_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11090 KV790835.1 GeneMarkS+ CDS 86254 87696 . + 0 ID=cds-OFS98120.1;Parent=gene-HMPREF3107_11090;Dbxref=NCBI_GP:OFS98120.1;Name=OFS98120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11090;product=hypothetical protein;protein_id=OFS98120.1;transl_table=11 KV790835.1 Genbank gene 87719 89017 . + . ID=gene-HMPREF3107_11095;Name=HMPREF3107_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11095 KV790835.1 Protein Homology CDS 87719 89017 . + 0 ID=cds-OFS98121.1;Parent=gene-HMPREF3107_11095;Dbxref=NCBI_GP:OFS98121.1;Name=OFS98121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256036.1;locus_tag=HMPREF3107_11095;product=tyrosine--tRNA ligase;protein_id=OFS98121.1;transl_table=11 KV790835.1 Genbank gene 89150 90859 . + . ID=gene-HMPREF3107_11100;Name=HMPREF3107_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11100 KV790835.1 Protein Homology CDS 89150 90859 . + 0 ID=cds-OFS98122.1;Parent=gene-HMPREF3107_11100;Dbxref=NCBI_GP:OFS98122.1;Name=OFS98122.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173517.1;locus_tag=HMPREF3107_11100;product=proline--tRNA ligase;protein_id=OFS98122.1;transl_table=11 KV790835.1 Genbank gene 91173 92042 . - . ID=gene-HMPREF3107_11105;Name=HMPREF3107_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11105 KV790835.1 Protein Homology CDS 91173 92042 . - 0 ID=cds-OFS98123.1;Parent=gene-HMPREF3107_11105;Dbxref=NCBI_GP:OFS98123.1;Name=OFS98123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271726.1;locus_tag=HMPREF3107_11105;product=acetyl-CoA carboxylase carboxyl transferase subunit beta;protein_id=OFS98123.1;transl_table=11 KV790835.1 Genbank gene 92203 92658 . - . ID=gene-HMPREF3107_11110;Name=HMPREF3107_11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11110 KV790835.1 GeneMarkS+ CDS 92203 92658 . - 0 ID=cds-OFS98124.1;Parent=gene-HMPREF3107_11110;Dbxref=NCBI_GP:OFS98124.1;Name=OFS98124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11110;product=hypothetical protein;protein_id=OFS98124.1;transl_table=11 KV790835.1 Genbank gene 92752 93543 . - . ID=gene-HMPREF3107_11115;Name=HMPREF3107_11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11115 KV790835.1 Protein Homology CDS 92752 93543 . - 0 ID=cds-OFS98125.1;Parent=gene-HMPREF3107_11115;Dbxref=NCBI_GP:OFS98125.1;Name=OFS98125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565727.1;locus_tag=HMPREF3107_11115;product=tryptophan synthase subunit alpha;protein_id=OFS98125.1;transl_table=11 KV790835.1 Genbank gene 93616 94107 . - . ID=gene-HMPREF3107_11120;Name=HMPREF3107_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11120 KV790835.1 GeneMarkS+ CDS 93616 94107 . - 0 ID=cds-OFS98126.1;Parent=gene-HMPREF3107_11120;Dbxref=NCBI_GP:OFS98126.1;Name=OFS98126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11120;product=hypothetical protein;protein_id=OFS98126.1;transl_table=11 KV790835.1 Genbank gene 94169 94627 . - . ID=gene-HMPREF3107_11125;Name=HMPREF3107_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11125 KV790835.1 GeneMarkS+ CDS 94169 94627 . - 0 ID=cds-OFS98127.1;Parent=gene-HMPREF3107_11125;Dbxref=NCBI_GP:OFS98127.1;Name=OFS98127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11125;product=hypothetical protein;protein_id=OFS98127.1;transl_table=11 KV790835.1 Genbank gene 94947 95180 . - . ID=gene-HMPREF3107_11130;Name=HMPREF3107_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11130 KV790835.1 GeneMarkS+ CDS 94947 95180 . - 0 ID=cds-OFS98128.1;Parent=gene-HMPREF3107_11130;Dbxref=NCBI_GP:OFS98128.1;Name=OFS98128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11130;product=hypothetical protein;protein_id=OFS98128.1;transl_table=11 KV790835.1 Genbank gene 95222 95488 . - . ID=gene-HMPREF3107_11135;Name=HMPREF3107_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11135 KV790835.1 Protein Homology CDS 95222 95488 . - 0 ID=cds-OFS98129.1;Parent=gene-HMPREF3107_11135;Dbxref=NCBI_GP:OFS98129.1;Name=OFS98129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565734.1;locus_tag=HMPREF3107_11135;product=zinc ABC transporter ATP-binding protein;protein_id=OFS98129.1;transl_table=11 KV790835.1 Genbank gene 95430 95909 . - . ID=gene-HMPREF3107_11140;Name=HMPREF3107_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11140 KV790835.1 GeneMarkS+ CDS 95430 95909 . - 0 ID=cds-OFS98130.1;Parent=gene-HMPREF3107_11140;Dbxref=NCBI_GP:OFS98130.1;Name=OFS98130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11140;product=hypothetical protein;protein_id=OFS98130.1;transl_table=11 KV790835.1 Genbank gene 95921 96340 . - . ID=gene-HMPREF3107_11145;Name=HMPREF3107_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11145 KV790835.1 GeneMarkS+ CDS 95921 96340 . - 0 ID=cds-OFS98131.1;Parent=gene-HMPREF3107_11145;Dbxref=NCBI_GP:OFS98131.1;Name=OFS98131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11145;product=hypothetical protein;protein_id=OFS98131.1;transl_table=11 KV790835.1 Genbank gene 96397 97755 . - . ID=gene-HMPREF3107_11150;Name=HMPREF3107_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11150 KV790835.1 Protein Homology CDS 96397 97755 . - 0 ID=cds-OFS98132.1;Parent=gene-HMPREF3107_11150;Dbxref=NCBI_GP:OFS98132.1;Name=OFS98132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565735.1;locus_tag=HMPREF3107_11150;product=hypothetical protein;protein_id=OFS98132.1;transl_table=11 KV790835.1 Genbank gene 97943 98215 . - . ID=gene-HMPREF3107_11155;Name=HMPREF3107_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11155 KV790835.1 Protein Homology CDS 97943 98215 . - 0 ID=cds-OFS98133.1;Parent=gene-HMPREF3107_11155;Dbxref=NCBI_GP:OFS98133.1;Name=OFS98133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448620.1;locus_tag=HMPREF3107_11155;product=hypothetical protein;protein_id=OFS98133.1;transl_table=11 KV790835.1 Genbank gene 98684 100021 . + . ID=gene-HMPREF3107_11160;Name=HMPREF3107_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11160 KV790835.1 Protein Homology CDS 98684 100021 . + 0 ID=cds-OFS98134.1;Parent=gene-HMPREF3107_11160;Dbxref=NCBI_GP:OFS98134.1;Name=OFS98134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003244584.1;locus_tag=HMPREF3107_11160;product=glutamate dehydrogenase;protein_id=OFS98134.1;transl_table=11 ##sequence-region KV790836.1 1 9654 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1581075 KV790836.1 Genbank region 1 9654 . + . ID=KV790836.1:1..9654;Dbxref=HMP:3107,taxon:1581075;gbkey=Src;genome=genomic;isolation-source=Respiratory;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC31F04 KV790836.1 Genbank pseudogene 1 512 . - . ID=gene-HMPREF3107_11165;Name=HMPREF3107_11165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF3107_11165;pseudo=true KV790836.1 GeneMarkS+ CDS 1 512 . - 0 ID=cds-HMPREF3107_11165;Parent=gene-HMPREF3107_11165;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11165;product=hypothetical protein;pseudo=true;transl_table=11 KV790836.1 Genbank gene 586 2862 . - . ID=gene-HMPREF3107_11170;Name=HMPREF3107_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11170 KV790836.1 Protein Homology CDS 586 2862 . - 0 ID=cds-OFS98039.1;Parent=gene-HMPREF3107_11170;Dbxref=NCBI_GP:OFS98039.1;Name=OFS98039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225921.1;locus_tag=HMPREF3107_11170;product=RNA-binding transcriptional accessory protein;protein_id=OFS98039.1;transl_table=11 KV790836.1 Genbank gene 2909 3742 . - . ID=gene-HMPREF3107_11175;Name=HMPREF3107_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11175 KV790836.1 GeneMarkS+ CDS 2909 3742 . - 0 ID=cds-OFS98040.1;Parent=gene-HMPREF3107_11175;Dbxref=NCBI_GP:OFS98040.1;Name=OFS98040.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11175;product=hypothetical protein;protein_id=OFS98040.1;transl_table=11 KV790836.1 Genbank gene 3974 4522 . - . ID=gene-HMPREF3107_11180;Name=HMPREF3107_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11180 KV790836.1 Protein Homology CDS 3974 4522 . - 0 ID=cds-OFS98046.1;Parent=gene-HMPREF3107_11180;Dbxref=NCBI_GP:OFS98046.1;Name=OFS98046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341874.1;locus_tag=HMPREF3107_11180;product=hypothetical protein;protein_id=OFS98046.1;transl_table=11 KV790836.1 Genbank gene 4643 5107 . - . ID=gene-HMPREF3107_11185;Name=HMPREF3107_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11185 KV790836.1 Protein Homology CDS 4643 5107 . - 0 ID=cds-OFS98041.1;Parent=gene-HMPREF3107_11185;Dbxref=NCBI_GP:OFS98041.1;Name=OFS98041.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341872.1;locus_tag=HMPREF3107_11185;product=tRNA (cytosine(34)-2'-O)-methyltransferase TrmL;protein_id=OFS98041.1;transl_table=11 KV790836.1 Genbank gene 5159 5791 . - . ID=gene-HMPREF3107_11190;Name=HMPREF3107_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11190 KV790836.1 Protein Homology CDS 5159 5791 . - 0 ID=cds-OFS98047.1;Parent=gene-HMPREF3107_11190;Dbxref=NCBI_GP:OFS98047.1;Name=OFS98047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341871.1;locus_tag=HMPREF3107_11190;product=competence protein;protein_id=OFS98047.1;transl_table=11 KV790836.1 Genbank gene 5868 6608 . + . ID=gene-HMPREF3107_11195;Name=HMPREF3107_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11195 KV790836.1 Protein Homology CDS 5868 6608 . + 0 ID=cds-OFS98042.1;Parent=gene-HMPREF3107_11195;Dbxref=NCBI_GP:OFS98042.1;Name=OFS98042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426432.1;locus_tag=HMPREF3107_11195;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=OFS98042.1;transl_table=11 KV790836.1 Genbank gene 6651 7616 . + . ID=gene-HMPREF3107_11200;Name=HMPREF3107_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11200 KV790836.1 Protein Homology CDS 6651 7616 . + 0 ID=cds-OFS98043.1;Parent=gene-HMPREF3107_11200;Dbxref=NCBI_GP:OFS98043.1;Name=OFS98043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772364.1;locus_tag=HMPREF3107_11200;product=rieske;protein_id=OFS98043.1;transl_table=11 KV790836.1 Genbank gene 7650 8495 . + . ID=gene-HMPREF3107_11205;Name=HMPREF3107_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11205 KV790836.1 Protein Homology CDS 7650 8495 . + 0 ID=cds-OFS98044.1;Parent=gene-HMPREF3107_11205;Dbxref=NCBI_GP:OFS98044.1;Name=OFS98044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270372.1;locus_tag=HMPREF3107_11205;product=phosphatase;protein_id=OFS98044.1;transl_table=11 KV790836.1 Genbank gene 8911 9348 . - . ID=gene-HMPREF3107_11210;Name=HMPREF3107_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF3107_11210 KV790836.1 GeneMarkS+ CDS 8911 9348 . - 0 ID=cds-OFS98045.1;Parent=gene-HMPREF3107_11210;Dbxref=NCBI_GP:OFS98045.1;Name=OFS98045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF3107_11210;product=hypothetical protein;protein_id=OFS98045.1;transl_table=11 ###