##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM181222v1 #!genome-build-accession NCBI_Assembly:GCA_001812225.1 #!annotation-date 03/02/2016 20:06:41 #!annotation-source NCBI ##sequence-region KV808154.1 1 1548 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808154.1 Genbank region 1 1548 . + . ID=KV808154.1:1..1548;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808154.1 Genbank gene 213 728 . - . ID=gene-HMPREF2844_00005;Name=HMPREF2844_00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00005 KV808154.1 Protein Homology CDS 213 728 . - 0 ID=cds-OFJ77015.1;Parent=gene-HMPREF2844_00005;Dbxref=NCBI_GP:OFJ77015.1;Name=OFJ77015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004694735.1;locus_tag=HMPREF2844_00005;product=hypothetical protein;protein_id=OFJ77015.1;transl_table=11 KV808154.1 Genbank gene 785 1447 . - . ID=gene-HMPREF2844_00010;Name=HMPREF2844_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00010 KV808154.1 Protein Homology CDS 785 1447 . - 0 ID=cds-OFJ77016.1;Parent=gene-HMPREF2844_00010;Dbxref=NCBI_GP:OFJ77016.1;Name=OFJ77016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001985483.1;locus_tag=HMPREF2844_00010;product=type IV secretion protein Rhs;protein_id=OFJ77016.1;transl_table=11 ##sequence-region KV808155.1 1 8023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808155.1 Genbank region 1 8023 . + . ID=KV808155.1:1..8023;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808155.1 Genbank gene 1123 1515 . - . ID=gene-HMPREF2844_00015;Name=HMPREF2844_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00015 KV808155.1 Protein Homology CDS 1123 1515 . - 0 ID=cds-OFJ86457.1;Parent=gene-HMPREF2844_00015;Dbxref=NCBI_GP:OFJ86457.1;Name=OFJ86457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958115.1;locus_tag=HMPREF2844_00015;product=30S ribosomal protein S9;protein_id=OFJ86457.1;transl_table=11 KV808155.1 Genbank gene 1525 1956 . - . ID=gene-HMPREF2844_00020;Name=HMPREF2844_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00020 KV808155.1 Protein Homology CDS 1525 1956 . - 0 ID=cds-OFJ86458.1;Parent=gene-HMPREF2844_00020;Dbxref=NCBI_GP:OFJ86458.1;Name=OFJ86458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343693.1;locus_tag=HMPREF2844_00020;product=50S ribosomal protein L13;protein_id=OFJ86458.1;transl_table=11 KV808155.1 Genbank gene 2217 2396 . - . ID=gene-HMPREF2844_00025;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=HMPREF2844_00025 KV808155.1 cmsearch ncRNA 2217 2396 . - . ID=rna-HMPREF2844_00025;Parent=gene-HMPREF2844_00025;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_00025;product=6S RNA KV808155.1 cmsearch exon 2217 2396 . - . ID=exon-HMPREF2844_00025-1;Parent=rna-HMPREF2844_00025;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_00025;product=6S RNA KV808155.1 Genbank gene 2404 2706 . - . ID=gene-HMPREF2844_00030;Name=HMPREF2844_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00030 KV808155.1 Protein Homology CDS 2404 2706 . - 0 ID=cds-OFJ86459.1;Parent=gene-HMPREF2844_00030;Dbxref=NCBI_GP:OFJ86459.1;Name=OFJ86459.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681511.1;locus_tag=HMPREF2844_00030;product=cell division protein ZapA;protein_id=OFJ86459.1;transl_table=11 KV808155.1 Genbank gene 2716 3039 . - . ID=gene-HMPREF2844_00035;Name=HMPREF2844_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00035 KV808155.1 Protein Homology CDS 2716 3039 . - 0 ID=cds-OFJ86460.1;Parent=gene-HMPREF2844_00035;Dbxref=NCBI_GP:OFJ86460.1;Name=OFJ86460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271148.1;locus_tag=HMPREF2844_00035;product=hypothetical protein;protein_id=OFJ86460.1;transl_table=11 KV808155.1 Genbank gene 3181 4170 . - . ID=gene-HMPREF2844_00040;Name=HMPREF2844_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00040 KV808155.1 Protein Homology CDS 3181 4170 . - 0 ID=cds-OFJ86461.1;Parent=gene-HMPREF2844_00040;Dbxref=NCBI_GP:OFJ86461.1;Name=OFJ86461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686481.1;locus_tag=HMPREF2844_00040;product=glycerol-3-phosphate dehydrogenase;protein_id=OFJ86461.1;transl_table=11 KV808155.1 Genbank pseudogene 4499 5683 . + . ID=gene-HMPREF2844_00045;Name=HMPREF2844_00045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_00045;pseudo=true KV808155.1 Protein Homology CDS 4499 5683 . + 0 ID=cds-HMPREF2844_00045;Parent=gene-HMPREF2844_00045;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003705279.1;locus_tag=HMPREF2844_00045;product=cytochrome-c peroxidase;pseudo=true;transl_table=11 KV808155.1 cmsearch binding_site 5897 5996 . + . ID=id-KV808155.1:5897..5996;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV808155.1 Genbank gene 6089 7990 . + . ID=gene-HMPREF2844_00050;Name=HMPREF2844_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00050 KV808155.1 Protein Homology CDS 6089 7990 . + 0 ID=cds-OFJ86462.1;Parent=gene-HMPREF2844_00050;Dbxref=NCBI_GP:OFJ86462.1;Name=OFJ86462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F588.1;locus_tag=HMPREF2844_00050;product=phosphomethylpyrimidine synthase ThiC;protein_id=OFJ86462.1;transl_table=11 ##sequence-region KV808156.1 1 10193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808156.1 Genbank region 1 10193 . + . ID=KV808156.1:1..10193;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808156.1 Genbank gene 301 1011 . - . ID=gene-HMPREF2844_00055;Name=HMPREF2844_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00055 KV808156.1 Protein Homology CDS 301 1011 . - 0 ID=cds-OFJ83996.1;Parent=gene-HMPREF2844_00055;Dbxref=NCBI_GP:OFJ83996.1;Name=OFJ83996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744675.1;locus_tag=HMPREF2844_00055;product=hypothetical protein;protein_id=OFJ83996.1;transl_table=11 KV808156.1 Genbank gene 1277 3313 . - . ID=gene-HMPREF2844_00060;Name=HMPREF2844_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00060 KV808156.1 Protein Homology CDS 1277 3313 . - 0 ID=cds-OFJ83988.1;Parent=gene-HMPREF2844_00060;Dbxref=NCBI_GP:OFJ83988.1;Name=OFJ83988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270417.1;locus_tag=HMPREF2844_00060;product=oligopeptidase A;protein_id=OFJ83988.1;transl_table=11 KV808156.1 Genbank gene 3558 4424 . - . ID=gene-HMPREF2844_00065;Name=HMPREF2844_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00065 KV808156.1 Protein Homology CDS 3558 4424 . - 0 ID=cds-OFJ83989.1;Parent=gene-HMPREF2844_00065;Dbxref=NCBI_GP:OFJ83989.1;Name=OFJ83989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757139.1;locus_tag=HMPREF2844_00065;product=hypothetical protein;protein_id=OFJ83989.1;transl_table=11 KV808156.1 Genbank gene 4457 5308 . - . ID=gene-HMPREF2844_00070;Name=HMPREF2844_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00070 KV808156.1 Protein Homology CDS 4457 5308 . - 0 ID=cds-OFJ83990.1;Parent=gene-HMPREF2844_00070;Dbxref=NCBI_GP:OFJ83990.1;Name=OFJ83990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687749.1;locus_tag=HMPREF2844_00070;product=hypothetical protein;protein_id=OFJ83990.1;transl_table=11 KV808156.1 Genbank gene 5608 5943 . + . ID=gene-HMPREF2844_00075;Name=HMPREF2844_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00075 KV808156.1 Protein Homology CDS 5608 5943 . + 0 ID=cds-OFJ83991.1;Parent=gene-HMPREF2844_00075;Dbxref=NCBI_GP:OFJ83991.1;Name=OFJ83991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684489.1;locus_tag=HMPREF2844_00075;product=hypothetical protein;protein_id=OFJ83991.1;transl_table=11 KV808156.1 Genbank gene 6074 7087 . - . ID=gene-HMPREF2844_00080;Name=HMPREF2844_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00080 KV808156.1 Protein Homology CDS 6074 7087 . - 0 ID=cds-OFJ83992.1;Parent=gene-HMPREF2844_00080;Dbxref=NCBI_GP:OFJ83992.1;Name=OFJ83992.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271110.1;locus_tag=HMPREF2844_00080;product=ketol-acid reductoisomerase;protein_id=OFJ83992.1;transl_table=11 KV808156.1 Genbank gene 7161 7454 . - . ID=gene-HMPREF2844_00085;Name=HMPREF2844_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00085 KV808156.1 Protein Homology CDS 7161 7454 . - 0 ID=cds-OFJ83993.1;Parent=gene-HMPREF2844_00085;Dbxref=NCBI_GP:OFJ83993.1;Name=OFJ83993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779360.1;locus_tag=HMPREF2844_00085;product=antibiotic biosynthesis monooxygenase;protein_id=OFJ83993.1;transl_table=11 KV808156.1 Genbank gene 7516 8007 . - . ID=gene-HMPREF2844_00090;Name=HMPREF2844_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00090 KV808156.1 Protein Homology CDS 7516 8007 . - 0 ID=cds-OFJ83994.1;Parent=gene-HMPREF2844_00090;Dbxref=NCBI_GP:OFJ83994.1;Name=OFJ83994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003706746.1;locus_tag=HMPREF2844_00090;product=acetolactate synthase small subunit;protein_id=OFJ83994.1;transl_table=11 KV808156.1 Genbank gene 8019 9746 . - . ID=gene-HMPREF2844_00095;Name=HMPREF2844_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00095 KV808156.1 Protein Homology CDS 8019 9746 . - 0 ID=cds-OFJ83995.1;Parent=gene-HMPREF2844_00095;Dbxref=NCBI_GP:OFJ83995.1;Name=OFJ83995.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271109.1;locus_tag=HMPREF2844_00095;product=acetolactate synthase 3 catalytic subunit;protein_id=OFJ83995.1;transl_table=11 ##sequence-region KV808157.1 1 7485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808157.1 Genbank region 1 7485 . + . ID=KV808157.1:1..7485;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808157.1 Genbank gene 430 1428 . - . ID=gene-HMPREF2844_00100;Name=HMPREF2844_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00100 KV808157.1 Protein Homology CDS 430 1428 . - 0 ID=cds-OFJ83867.1;Parent=gene-HMPREF2844_00100;Dbxref=NCBI_GP:OFJ83867.1;Name=OFJ83867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684414.1;locus_tag=HMPREF2844_00100;product=L%2CD-transpeptidase catalytic domain protein;protein_id=OFJ83867.1;transl_table=11 KV808157.1 Genbank gene 1524 2900 . + . ID=gene-HMPREF2844_00105;Name=HMPREF2844_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00105 KV808157.1 Protein Homology CDS 1524 2900 . + 0 ID=cds-OFJ83868.1;Parent=gene-HMPREF2844_00105;Dbxref=NCBI_GP:OFJ83868.1;Name=OFJ83868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743742.1;locus_tag=HMPREF2844_00105;product=23S rRNA (uracil(1939)-C(5))-methyltransferase;protein_id=OFJ83868.1;transl_table=11 KV808157.1 Genbank gene 3046 4497 . + . ID=gene-HMPREF2844_00110;Name=HMPREF2844_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00110 KV808157.1 Protein Homology CDS 3046 4497 . + 0 ID=cds-OFJ83869.1;Parent=gene-HMPREF2844_00110;Dbxref=NCBI_GP:OFJ83869.1;Name=OFJ83869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743740.1;locus_tag=HMPREF2844_00110;product=23S rRNA methyltransferase;protein_id=OFJ83869.1;transl_table=11 KV808157.1 Genbank gene 4522 5616 . + . ID=gene-HMPREF2844_00115;Name=HMPREF2844_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00115 KV808157.1 Protein Homology CDS 4522 5616 . + 0 ID=cds-OFJ83870.1;Parent=gene-HMPREF2844_00115;Dbxref=NCBI_GP:OFJ83870.1;Name=OFJ83870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686785.1;locus_tag=HMPREF2844_00115;product=alpha-glucan phosphorylase;protein_id=OFJ83870.1;transl_table=11 KV808157.1 Genbank gene 5629 6165 . + . ID=gene-HMPREF2844_00120;Name=HMPREF2844_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00120 KV808157.1 Protein Homology CDS 5629 6165 . + 0 ID=cds-OFJ83871.1;Parent=gene-HMPREF2844_00120;Dbxref=NCBI_GP:OFJ83871.1;Name=OFJ83871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684400.1;locus_tag=HMPREF2844_00120;product=GTP-binding protein;protein_id=OFJ83871.1;transl_table=11 KV808157.1 Genbank gene 6171 6812 . + . ID=gene-HMPREF2844_00125;Name=HMPREF2844_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00125 KV808157.1 Protein Homology CDS 6171 6812 . + 0 ID=cds-OFJ83872.1;Parent=gene-HMPREF2844_00125;Dbxref=NCBI_GP:OFJ83872.1;Name=OFJ83872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232884.1;locus_tag=HMPREF2844_00125;product=peptidase M23;protein_id=OFJ83872.1;transl_table=11 KV808157.1 Genbank gene 6852 7211 . + . ID=gene-HMPREF2844_00130;Name=HMPREF2844_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00130 KV808157.1 Protein Homology CDS 6852 7211 . + 0 ID=cds-OFJ83873.1;Parent=gene-HMPREF2844_00130;Dbxref=NCBI_GP:OFJ83873.1;Name=OFJ83873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684442.1;locus_tag=HMPREF2844_00130;product=hypothetical protein;protein_id=OFJ83873.1;transl_table=11 KV808157.1 Genbank gene 7308 7383 . + . ID=gene-HMPREF2844_00135;Name=HMPREF2844_00135;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_00135 KV808157.1 tRNAscan-SE tRNA 7308 7383 . + . ID=rna-HMPREF2844_00135;Parent=gene-HMPREF2844_00135;anticodon=(pos:7341..7343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00135;product=tRNA-Asn KV808157.1 tRNAscan-SE exon 7308 7383 . + . ID=exon-HMPREF2844_00135-1;Parent=rna-HMPREF2844_00135;anticodon=(pos:7341..7343);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00135;product=tRNA-Asn ##sequence-region KV808158.1 1 11060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808158.1 Genbank region 1 11060 . + . ID=KV808158.1:1..11060;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808158.1 Genbank gene 176 260 . - . ID=gene-HMPREF2844_00140;Name=HMPREF2844_00140;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_00140 KV808158.1 tRNAscan-SE tRNA 176 260 . - . ID=rna-HMPREF2844_00140;Parent=gene-HMPREF2844_00140;anticodon=(pos:complement(224..226));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00140;product=tRNA-Leu KV808158.1 tRNAscan-SE exon 176 260 . - . ID=exon-HMPREF2844_00140-1;Parent=rna-HMPREF2844_00140;anticodon=(pos:complement(224..226));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00140;product=tRNA-Leu KV808158.1 Genbank gene 553 1266 . + . ID=gene-HMPREF2844_00145;Name=HMPREF2844_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00145 KV808158.1 Protein Homology CDS 553 1266 . + 0 ID=cds-OFJ83436.1;Parent=gene-HMPREF2844_00145;Dbxref=NCBI_GP:OFJ83436.1;Name=OFJ83436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748483.1;locus_tag=HMPREF2844_00145;product=ahpC/TSA family protein;protein_id=OFJ83436.1;transl_table=11 KV808158.1 Genbank gene 1393 2046 . + . ID=gene-HMPREF2844_00150;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=HMPREF2844_00150 KV808158.1 Protein Homology CDS 1393 2046 . + 0 ID=cds-OFJ83426.1;Parent=gene-HMPREF2844_00150;Dbxref=NCBI_GP:OFJ83426.1;Name=OFJ83426.1;Note=short form of enzyme%3B requires HisZ for function%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms heteromultimer of HisG and HisZ;gbkey=CDS;gene=hisG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269935.1;locus_tag=HMPREF2844_00150;product=ATP phosphoribosyltransferase;protein_id=OFJ83426.1;transl_table=11 KV808158.1 Genbank gene 2150 3037 . + . ID=gene-HMPREF2844_00155;Name=HMPREF2844_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00155 KV808158.1 Protein Homology CDS 2150 3037 . + 0 ID=cds-OFJ83427.1;Parent=gene-HMPREF2844_00155;Dbxref=NCBI_GP:OFJ83427.1;Name=OFJ83427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216786.1;locus_tag=HMPREF2844_00155;product=endonuclease;protein_id=OFJ83427.1;transl_table=11 KV808158.1 Genbank gene 3034 4326 . + . ID=gene-HMPREF2844_00160;Name=HMPREF2844_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00160 KV808158.1 Protein Homology CDS 3034 4326 . + 0 ID=cds-OFJ83428.1;Parent=gene-HMPREF2844_00160;Dbxref=NCBI_GP:OFJ83428.1;Name=OFJ83428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688028.1;locus_tag=HMPREF2844_00160;product=histidinol dehydrogenase;protein_id=OFJ83428.1;transl_table=11 KV808158.1 Genbank gene 4417 5175 . + . ID=gene-HMPREF2844_00165;Name=HMPREF2844_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00165 KV808158.1 Protein Homology CDS 4417 5175 . + 0 ID=cds-OFJ83429.1;Parent=gene-HMPREF2844_00165;Dbxref=NCBI_GP:OFJ83429.1;Name=OFJ83429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758993.1;locus_tag=HMPREF2844_00165;product=hypothetical protein;protein_id=OFJ83429.1;transl_table=11 KV808158.1 Genbank gene 5188 6249 . + . ID=gene-HMPREF2844_00170;Name=HMPREF2844_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00170 KV808158.1 Protein Homology CDS 5188 6249 . + 0 ID=cds-OFJ83430.1;Parent=gene-HMPREF2844_00170;Dbxref=NCBI_GP:OFJ83430.1;Name=OFJ83430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774770.1;locus_tag=HMPREF2844_00170;product=nucleotidyltransferase;protein_id=OFJ83430.1;transl_table=11 KV808158.1 Genbank gene 6385 7458 . - . ID=gene-HMPREF2844_00175;Name=HMPREF2844_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00175 KV808158.1 Protein Homology CDS 6385 7458 . - 0 ID=cds-OFJ83431.1;Parent=gene-HMPREF2844_00175;Dbxref=NCBI_GP:OFJ83431.1;Name=OFJ83431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173155.1;locus_tag=HMPREF2844_00175;product=sulfate ABC transporter ATP-binding protein;protein_id=OFJ83431.1;transl_table=11 KV808158.1 Genbank gene 7455 8315 . - . ID=gene-HMPREF2844_00180;Name=HMPREF2844_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00180 KV808158.1 Protein Homology CDS 7455 8315 . - 0 ID=cds-OFJ83432.1;Parent=gene-HMPREF2844_00180;Dbxref=NCBI_GP:OFJ83432.1;Name=OFJ83432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674970.1;locus_tag=HMPREF2844_00180;product=sulfate ABC transporter permease subunit CysW;protein_id=OFJ83432.1;transl_table=11 KV808158.1 Genbank gene 8586 9422 . - . ID=gene-HMPREF2844_00185;Name=HMPREF2844_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00185 KV808158.1 Protein Homology CDS 8586 9422 . - 0 ID=cds-OFJ83433.1;Parent=gene-HMPREF2844_00185;Dbxref=NCBI_GP:OFJ83433.1;Name=OFJ83433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222661.1;locus_tag=HMPREF2844_00185;product=sulfate/thiosulfate transporter subunit;protein_id=OFJ83433.1;transl_table=11 KV808158.1 Genbank gene 9657 10130 . + . ID=gene-HMPREF2844_00190;Name=HMPREF2844_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00190 KV808158.1 Protein Homology CDS 9657 10130 . + 0 ID=cds-OFJ83434.1;Parent=gene-HMPREF2844_00190;Dbxref=NCBI_GP:OFJ83434.1;Name=OFJ83434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519850.1;locus_tag=HMPREF2844_00190;product=iron-sulfur cluster repair protein DnrN;protein_id=OFJ83434.1;transl_table=11 KV808158.1 Genbank gene 10230 10724 . + . ID=gene-HMPREF2844_00195;Name=HMPREF2844_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00195 KV808158.1 Protein Homology CDS 10230 10724 . + 0 ID=cds-OFJ83435.1;Parent=gene-HMPREF2844_00195;Dbxref=NCBI_GP:OFJ83435.1;Name=OFJ83435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678851.1;locus_tag=HMPREF2844_00195;product=NemA protein;protein_id=OFJ83435.1;transl_table=11 KV808158.1 Genbank gene 10836 10911 . + . ID=gene-HMPREF2844_00200;Name=HMPREF2844_00200;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_00200 KV808158.1 tRNAscan-SE tRNA 10836 10911 . + . ID=rna-HMPREF2844_00200;Parent=gene-HMPREF2844_00200;anticodon=(pos:10869..10871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00200;product=tRNA-Asn KV808158.1 tRNAscan-SE exon 10836 10911 . + . ID=exon-HMPREF2844_00200-1;Parent=rna-HMPREF2844_00200;anticodon=(pos:10869..10871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00200;product=tRNA-Asn ##sequence-region KV808159.1 1 24340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808159.1 Genbank region 1 24340 . + . ID=KV808159.1:1..24340;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808159.1 Genbank gene 52 1026 . - . ID=gene-HMPREF2844_00205;Name=HMPREF2844_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00205 KV808159.1 Protein Homology CDS 52 1026 . - 0 ID=cds-OFJ82839.1;Parent=gene-HMPREF2844_00205;Dbxref=NCBI_GP:OFJ82839.1;Name=OFJ82839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742406.1;locus_tag=HMPREF2844_00205;product=fructose-bisphosphatase;protein_id=OFJ82839.1;transl_table=11 KV808159.1 Genbank gene 1100 1495 . - . ID=gene-HMPREF2844_00210;Name=HMPREF2844_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00210 KV808159.1 Protein Homology CDS 1100 1495 . - 0 ID=cds-OFJ82840.1;Parent=gene-HMPREF2844_00210;Dbxref=NCBI_GP:OFJ82840.1;Name=OFJ82840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687561.1;locus_tag=HMPREF2844_00210;product=hypothetical protein;protein_id=OFJ82840.1;transl_table=11 KV808159.1 Genbank gene 1644 2987 . + . ID=gene-HMPREF2844_00215;Name=HMPREF2844_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00215 KV808159.1 Protein Homology CDS 1644 2987 . + 0 ID=cds-OFJ82841.1;Parent=gene-HMPREF2844_00215;Dbxref=NCBI_GP:OFJ82841.1;Name=OFJ82841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271288.1;locus_tag=HMPREF2844_00215;product=poly(A) polymerase;protein_id=OFJ82841.1;transl_table=11 KV808159.1 Genbank gene 3168 4082 . - . ID=gene-HMPREF2844_00220;Name=HMPREF2844_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00220 KV808159.1 Protein Homology CDS 3168 4082 . - 0 ID=cds-OFJ82842.1;Parent=gene-HMPREF2844_00220;Dbxref=NCBI_GP:OFJ82842.1;Name=OFJ82842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687563.1;locus_tag=HMPREF2844_00220;product=pseudouridine synthase;protein_id=OFJ82842.1;transl_table=11 KV808159.1 Genbank gene 4084 4494 . - . ID=gene-HMPREF2844_00225;Name=HMPREF2844_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00225 KV808159.1 Protein Homology CDS 4084 4494 . - 0 ID=cds-OFJ82843.1;Parent=gene-HMPREF2844_00225;Dbxref=NCBI_GP:OFJ82843.1;Name=OFJ82843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173407.1;locus_tag=HMPREF2844_00225;product=hypothetical protein;protein_id=OFJ82843.1;transl_table=11 KV808159.1 Genbank gene 4577 4948 . - . ID=gene-HMPREF2844_00230;Name=HMPREF2844_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00230 KV808159.1 Protein Homology CDS 4577 4948 . - 0 ID=cds-OFJ82844.1;Parent=gene-HMPREF2844_00230;Dbxref=NCBI_GP:OFJ82844.1;Name=OFJ82844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273043.1;locus_tag=HMPREF2844_00230;product=ribosome-binding factor A;protein_id=OFJ82844.1;transl_table=11 KV808159.1 Genbank gene 5067 6107 . + . ID=gene-HMPREF2844_00235;Name=HMPREF2844_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00235 KV808159.1 Protein Homology CDS 5067 6107 . + 0 ID=cds-OFJ82845.1;Parent=gene-HMPREF2844_00235;Dbxref=NCBI_GP:OFJ82845.1;Name=OFJ82845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742415.1;locus_tag=HMPREF2844_00235;product=oxidoreductase;protein_id=OFJ82845.1;transl_table=11 KV808159.1 Genbank gene 6442 7488 . - . ID=gene-HMPREF2844_00240;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=HMPREF2844_00240 KV808159.1 Protein Homology CDS 6442 7488 . - 0 ID=cds-OFJ82846.1;Parent=gene-HMPREF2844_00240;Dbxref=NCBI_GP:OFJ82846.1;Name=OFJ82846.1;Note=catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs;gbkey=CDS;gene=recA;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KUQ0.1;locus_tag=HMPREF2844_00240;product=DNA recombination/repair protein RecA;protein_id=OFJ82846.1;transl_table=11 KV808159.1 Genbank gene 7723 8535 . - . ID=gene-HMPREF2844_00245;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF2844_00245 KV808159.1 Protein Homology CDS 7723 8535 . - 0 ID=cds-OFJ82847.1;Parent=gene-HMPREF2844_00245;Dbxref=NCBI_GP:OFJ82847.1;Name=OFJ82847.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759661.1;locus_tag=HMPREF2844_00245;product=pyruvate formate lyase-activating enzyme 1;protein_id=OFJ82847.1;transl_table=11 KV808159.1 Genbank gene 8828 11113 . - . ID=gene-HMPREF2844_00250;Name=HMPREF2844_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00250 KV808159.1 Protein Homology CDS 8828 11113 . - 0 ID=cds-OFJ82848.1;Parent=gene-HMPREF2844_00250;Dbxref=NCBI_GP:OFJ82848.1;Name=OFJ82848.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746444.1;locus_tag=HMPREF2844_00250;product=formate acetyltransferase;protein_id=OFJ82848.1;transl_table=11 KV808159.1 Genbank gene 11531 12004 . - . ID=gene-HMPREF2844_00255;Name=HMPREF2844_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00255 KV808159.1 Protein Homology CDS 11531 12004 . - 0 ID=cds-OFJ82849.1;Parent=gene-HMPREF2844_00255;Dbxref=NCBI_GP:OFJ82849.1;Name=OFJ82849.1;Note=iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687569.1;locus_tag=HMPREF2844_00255;product=bacterioferritin;protein_id=OFJ82849.1;transl_table=11 KV808159.1 Genbank gene 12027 12491 . - . ID=gene-HMPREF2844_00260;Name=HMPREF2844_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00260 KV808159.1 Protein Homology CDS 12027 12491 . - 0 ID=cds-OFJ82850.1;Parent=gene-HMPREF2844_00260;Dbxref=NCBI_GP:OFJ82850.1;Name=OFJ82850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675404.1;locus_tag=HMPREF2844_00260;product=bacterioferritin;protein_id=OFJ82850.1;transl_table=11 KV808159.1 Genbank gene 12911 14722 . + . ID=gene-HMPREF2844_00265;Name=HMPREF2844_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00265 KV808159.1 Protein Homology CDS 12911 14722 . + 0 ID=cds-OFJ82851.1;Parent=gene-HMPREF2844_00265;Dbxref=NCBI_GP:OFJ82851.1;Name=OFJ82851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712017.1;locus_tag=HMPREF2844_00265;product=GTP-binding protein TypA;protein_id=OFJ82851.1;transl_table=11 KV808159.1 Genbank gene 14905 15441 . - . ID=gene-HMPREF2844_00270;Name=HMPREF2844_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00270 KV808159.1 Protein Homology CDS 14905 15441 . - 0 ID=cds-OFJ82852.1;Parent=gene-HMPREF2844_00270;Dbxref=NCBI_GP:OFJ82852.1;Name=OFJ82852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271296.1;locus_tag=HMPREF2844_00270;product=hypothetical protein;protein_id=OFJ82852.1;transl_table=11 KV808159.1 Genbank gene 15598 16584 . - . ID=gene-HMPREF2844_00275;Name=HMPREF2844_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00275 KV808159.1 Protein Homology CDS 15598 16584 . - 0 ID=cds-OFJ82853.1;Parent=gene-HMPREF2844_00275;Dbxref=NCBI_GP:OFJ82853.1;Name=OFJ82853.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239803.1;locus_tag=HMPREF2844_00275;product=lipoyl synthase;protein_id=OFJ82853.1;transl_table=11 KV808159.1 Genbank gene 16584 17201 . - . ID=gene-HMPREF2844_00280;Name=HMPREF2844_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00280 KV808159.1 Protein Homology CDS 16584 17201 . - 0 ID=cds-OFJ82854.1;Parent=gene-HMPREF2844_00280;Dbxref=NCBI_GP:OFJ82854.1;Name=OFJ82854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448905.1;locus_tag=HMPREF2844_00280;product=octanoyltransferase;protein_id=OFJ82854.1;transl_table=11 KV808159.1 Genbank gene 17203 17469 . - . ID=gene-HMPREF2844_00285;Name=HMPREF2844_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00285 KV808159.1 Protein Homology CDS 17203 17469 . - 0 ID=cds-OFJ82855.1;Parent=gene-HMPREF2844_00285;Dbxref=NCBI_GP:OFJ82855.1;Name=OFJ82855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742444.1;locus_tag=HMPREF2844_00285;product=hypothetical protein;protein_id=OFJ82855.1;transl_table=11 KV808159.1 Genbank gene 17670 20132 . + . ID=gene-HMPREF2844_00290;Name=HMPREF2844_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00290 KV808159.1 Protein Homology CDS 17670 20132 . + 0 ID=cds-OFJ82856.1;Parent=gene-HMPREF2844_00290;Dbxref=NCBI_GP:OFJ82856.1;Name=OFJ82856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233897.1;locus_tag=HMPREF2844_00290;product=endopeptidase La;protein_id=OFJ82856.1;transl_table=11 KV808159.1 Genbank gene 20317 20586 . + . ID=gene-HMPREF2844_00295;Name=HMPREF2844_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00295 KV808159.1 Protein Homology CDS 20317 20586 . + 0 ID=cds-OFJ82857.1;Parent=gene-HMPREF2844_00295;Dbxref=NCBI_GP:OFJ82857.1;Name=OFJ82857.1;Note=histone-like DNA-binding protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342959.1;locus_tag=HMPREF2844_00295;product=DNA-binding protein HU;protein_id=OFJ82857.1;transl_table=11 KV808159.1 Genbank gene 20676 21059 . - . ID=gene-HMPREF2844_00300;Name=HMPREF2844_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00300 KV808159.1 Protein Homology CDS 20676 21059 . - 0 ID=cds-OFJ82858.1;Parent=gene-HMPREF2844_00300;Dbxref=NCBI_GP:OFJ82858.1;Name=OFJ82858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742446.1;locus_tag=HMPREF2844_00300;product=hypothetical protein;protein_id=OFJ82858.1;transl_table=11 KV808159.1 Genbank gene 21056 21262 . - . ID=gene-HMPREF2844_00305;Name=HMPREF2844_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00305 KV808159.1 Protein Homology CDS 21056 21262 . - 0 ID=cds-OFJ82859.1;Parent=gene-HMPREF2844_00305;Dbxref=NCBI_GP:OFJ82859.1;Name=OFJ82859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742447.1;locus_tag=HMPREF2844_00305;product=dioxygenase;protein_id=OFJ82859.1;transl_table=11 KV808159.1 Genbank gene 21290 21868 . - . ID=gene-HMPREF2844_00310;Name=HMPREF2844_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00310 KV808159.1 Protein Homology CDS 21290 21868 . - 0 ID=cds-OFJ82860.1;Parent=gene-HMPREF2844_00310;Dbxref=NCBI_GP:OFJ82860.1;Name=OFJ82860.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F9L4.1;locus_tag=HMPREF2844_00310;product=aminoacyl-tRNA hydrolase;protein_id=OFJ82860.1;transl_table=11 KV808159.1 Genbank gene 21935 22210 . - . ID=gene-HMPREF2844_00315;Name=HMPREF2844_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00315 KV808159.1 Protein Homology CDS 21935 22210 . - 0 ID=cds-OFJ82861.1;Parent=gene-HMPREF2844_00315;Dbxref=NCBI_GP:OFJ82861.1;Name=OFJ82861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742451.1;locus_tag=HMPREF2844_00315;product=RnfH family protein;protein_id=OFJ82861.1;transl_table=11 KV808159.1 Genbank gene 22203 22634 . - . ID=gene-HMPREF2844_00320;Name=HMPREF2844_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00320 KV808159.1 Protein Homology CDS 22203 22634 . - 0 ID=cds-OFJ82862.1;Parent=gene-HMPREF2844_00320;Dbxref=NCBI_GP:OFJ82862.1;Name=OFJ82862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173302.1;locus_tag=HMPREF2844_00320;product=ubiquinone-binding protein;protein_id=OFJ82862.1;transl_table=11 KV808159.1 Genbank gene 22862 24271 . + . ID=gene-HMPREF2844_00325;Name=HMPREF2844_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00325 KV808159.1 Protein Homology CDS 22862 24271 . + 0 ID=cds-OFJ82863.1;Parent=gene-HMPREF2844_00325;Dbxref=NCBI_GP:OFJ82863.1;Name=OFJ82863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742454.1;locus_tag=HMPREF2844_00325;product=hypothetical protein;protein_id=OFJ82863.1;transl_table=11 ##sequence-region KV808160.1 1 6012 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808160.1 Genbank region 1 6012 . + . ID=KV808160.1:1..6012;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808160.1 Genbank gene 147 758 . + . ID=gene-HMPREF2844_00330;Name=HMPREF2844_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00330 KV808160.1 Protein Homology CDS 147 758 . + 0 ID=cds-OFJ82480.1;Parent=gene-HMPREF2844_00330;Dbxref=NCBI_GP:OFJ82480.1;Name=OFJ82480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777939.1;locus_tag=HMPREF2844_00330;product=hypothetical protein;protein_id=OFJ82480.1;transl_table=11 KV808160.1 Genbank gene 894 1235 . - . ID=gene-HMPREF2844_00335;Name=HMPREF2844_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00335 KV808160.1 Protein Homology CDS 894 1235 . - 0 ID=cds-OFJ82481.1;Parent=gene-HMPREF2844_00335;Dbxref=NCBI_GP:OFJ82481.1;Name=OFJ82481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013235088.1;locus_tag=HMPREF2844_00335;product=2Fe-2S ferredoxin;protein_id=OFJ82481.1;transl_table=11 KV808160.1 Genbank gene 1321 1683 . - . ID=gene-HMPREF2844_00340;Name=HMPREF2844_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00340 KV808160.1 Protein Homology CDS 1321 1683 . - 0 ID=cds-OFJ82482.1;Parent=gene-HMPREF2844_00340;Dbxref=NCBI_GP:OFJ82482.1;Name=OFJ82482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675349.1;locus_tag=HMPREF2844_00340;product=hypothetical protein;protein_id=OFJ82482.1;transl_table=11 KV808160.1 Genbank gene 1763 3625 . - . ID=gene-HMPREF2844_00345;Name=HMPREF2844_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00345 KV808160.1 Protein Homology CDS 1763 3625 . - 0 ID=cds-OFJ82483.1;Parent=gene-HMPREF2844_00345;Dbxref=NCBI_GP:OFJ82483.1;Name=OFJ82483.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519251.1;locus_tag=HMPREF2844_00345;product=Fe-S protein assembly chaperone HscA;protein_id=OFJ82483.1;transl_table=11 KV808160.1 Genbank gene 3822 4670 . + . ID=gene-HMPREF2844_00350;Name=HMPREF2844_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00350 KV808160.1 Protein Homology CDS 3822 4670 . + 0 ID=cds-OFJ82484.1;Parent=gene-HMPREF2844_00350;Dbxref=NCBI_GP:OFJ82484.1;Name=OFJ82484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778433.1;locus_tag=HMPREF2844_00350;product=squalene synthase HpnD;protein_id=OFJ82484.1;transl_table=11 KV808160.1 Genbank gene 4667 5980 . + . ID=gene-HMPREF2844_00355;Name=HMPREF2844_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00355 KV808160.1 Protein Homology CDS 4667 5980 . + 0 ID=cds-OFJ82485.1;Parent=gene-HMPREF2844_00355;Dbxref=NCBI_GP:OFJ82485.1;Name=OFJ82485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686746.1;locus_tag=HMPREF2844_00355;product=oxidoreductase;protein_id=OFJ82485.1;transl_table=11 ##sequence-region KV808161.1 1 32948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808161.1 Genbank region 1 32948 . + . ID=KV808161.1:1..32948;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808161.1 Genbank gene 213 1223 . + . ID=gene-HMPREF2844_00360;Name=HMPREF2844_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00360 KV808161.1 Protein Homology CDS 213 1223 . + 0 ID=cds-OFJ81754.1;Parent=gene-HMPREF2844_00360;Dbxref=NCBI_GP:OFJ81754.1;Name=OFJ81754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741992.1;locus_tag=HMPREF2844_00360;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=OFJ81754.1;transl_table=11 KV808161.1 Genbank gene 1298 1609 . - . ID=gene-HMPREF2844_00365;Name=HMPREF2844_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00365 KV808161.1 Protein Homology CDS 1298 1609 . - 0 ID=cds-OFJ81755.1;Parent=gene-HMPREF2844_00365;Dbxref=NCBI_GP:OFJ81755.1;Name=OFJ81755.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213914.1;locus_tag=HMPREF2844_00365;product=hypothetical protein;protein_id=OFJ81755.1;transl_table=11 KV808161.1 Genbank gene 1821 2591 . + . ID=gene-HMPREF2844_00370;Name=HMPREF2844_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00370 KV808161.1 Protein Homology CDS 1821 2591 . + 0 ID=cds-OFJ81756.1;Parent=gene-HMPREF2844_00370;Dbxref=NCBI_GP:OFJ81756.1;Name=OFJ81756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741993.1;locus_tag=HMPREF2844_00370;product=chromosome partitioning protein;protein_id=OFJ81756.1;transl_table=11 KV808161.1 Genbank gene 2802 3581 . - . ID=gene-HMPREF2844_00375;Name=HMPREF2844_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00375 KV808161.1 Protein Homology CDS 2802 3581 . - 0 ID=cds-OFJ81757.1;Parent=gene-HMPREF2844_00375;Dbxref=NCBI_GP:OFJ81757.1;Name=OFJ81757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677158.1;locus_tag=HMPREF2844_00375;product=type I methionyl aminopeptidase;protein_id=OFJ81757.1;transl_table=11 KV808161.1 Genbank gene 3691 4302 . - . ID=gene-HMPREF2844_00380;Name=HMPREF2844_00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00380 KV808161.1 Protein Homology CDS 3691 4302 . - 0 ID=cds-OFJ81758.1;Parent=gene-HMPREF2844_00380;Dbxref=NCBI_GP:OFJ81758.1;Name=OFJ81758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744935.1;locus_tag=HMPREF2844_00380;product=hypothetical protein;protein_id=OFJ81758.1;transl_table=11 KV808161.1 Genbank gene 4372 4983 . - . ID=gene-HMPREF2844_00385;Name=HMPREF2844_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00385 KV808161.1 Protein Homology CDS 4372 4983 . - 0 ID=cds-OFJ81759.1;Parent=gene-HMPREF2844_00385;Dbxref=NCBI_GP:OFJ81759.1;Name=OFJ81759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270778.1;locus_tag=HMPREF2844_00385;product=hemolysin;protein_id=OFJ81759.1;transl_table=11 KV808161.1 Genbank gene 5056 5649 . - . ID=gene-HMPREF2844_00390;Name=HMPREF2844_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00390 KV808161.1 Protein Homology CDS 5056 5649 . - 0 ID=cds-OFJ81760.1;Parent=gene-HMPREF2844_00390;Dbxref=NCBI_GP:OFJ81760.1;Name=OFJ81760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686872.1;locus_tag=HMPREF2844_00390;product=phosphoheptose isomerase;protein_id=OFJ81760.1;transl_table=11 KV808161.1 Genbank gene 5654 6001 . - . ID=gene-HMPREF2844_00395;Name=HMPREF2844_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00395 KV808161.1 Protein Homology CDS 5654 6001 . - 0 ID=cds-OFJ81761.1;Parent=gene-HMPREF2844_00395;Dbxref=NCBI_GP:OFJ81761.1;Name=OFJ81761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JWJ8.1;locus_tag=HMPREF2844_00395;product=hypothetical protein;protein_id=OFJ81761.1;transl_table=11 KV808161.1 Genbank gene 6057 6944 . + . ID=gene-HMPREF2844_00400;Name=HMPREF2844_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00400 KV808161.1 Protein Homology CDS 6057 6944 . + 0 ID=cds-OFJ81762.1;Parent=gene-HMPREF2844_00400;Dbxref=NCBI_GP:OFJ81762.1;Name=OFJ81762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749396.1;locus_tag=HMPREF2844_00400;product=rRNA (cytidine-2'-O-)-methyltransferase;protein_id=OFJ81762.1;transl_table=11 KV808161.1 Genbank gene 7007 7378 . + . ID=gene-HMPREF2844_00405;Name=HMPREF2844_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00405 KV808161.1 Protein Homology CDS 7007 7378 . + 0 ID=cds-OFJ81763.1;Parent=gene-HMPREF2844_00405;Dbxref=NCBI_GP:OFJ81763.1;Name=OFJ81763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681338.1;locus_tag=HMPREF2844_00405;product=MarR family transcriptional regulator;protein_id=OFJ81763.1;transl_table=11 KV808161.1 Genbank gene 7475 8254 . + . ID=gene-HMPREF2844_00410;Name=HMPREF2844_00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00410 KV808161.1 Protein Homology CDS 7475 8254 . + 0 ID=cds-OFJ81764.1;Parent=gene-HMPREF2844_00410;Dbxref=NCBI_GP:OFJ81764.1;Name=OFJ81764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215052.1;locus_tag=HMPREF2844_00410;product=exodeoxyribonuclease III;protein_id=OFJ81764.1;transl_table=11 KV808161.1 Genbank gene 8241 8585 . + . ID=gene-HMPREF2844_00415;Name=HMPREF2844_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00415 KV808161.1 Protein Homology CDS 8241 8585 . + 0 ID=cds-OFJ81765.1;Parent=gene-HMPREF2844_00415;Dbxref=NCBI_GP:OFJ81765.1;Name=OFJ81765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744952.1;locus_tag=HMPREF2844_00415;product=hypothetical protein;protein_id=OFJ81765.1;transl_table=11 KV808161.1 Genbank gene 8596 9126 . + . ID=gene-HMPREF2844_00420;Name=HMPREF2844_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00420 KV808161.1 Protein Homology CDS 8596 9126 . + 0 ID=cds-OFJ81766.1;Parent=gene-HMPREF2844_00420;Dbxref=NCBI_GP:OFJ81766.1;Name=OFJ81766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448313.1;locus_tag=HMPREF2844_00420;product=serine hydrolase;protein_id=OFJ81766.1;transl_table=11 KV808161.1 Genbank gene 9386 10195 . + . ID=gene-HMPREF2844_00425;Name=HMPREF2844_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00425 KV808161.1 Protein Homology CDS 9386 10195 . + 0 ID=cds-OFJ81767.1;Parent=gene-HMPREF2844_00425;Dbxref=NCBI_GP:OFJ81767.1;Name=OFJ81767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312665.1;locus_tag=HMPREF2844_00425;product=zinc transporter ZupT;protein_id=OFJ81767.1;transl_table=11 KV808161.1 Genbank gene 10267 10758 . + . ID=gene-HMPREF2844_00430;Name=HMPREF2844_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00430 KV808161.1 Protein Homology CDS 10267 10758 . + 0 ID=cds-OFJ81768.1;Parent=gene-HMPREF2844_00430;Dbxref=NCBI_GP:OFJ81768.1;Name=OFJ81768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681345.1;locus_tag=HMPREF2844_00430;product=hypothetical protein;protein_id=OFJ81768.1;transl_table=11 KV808161.1 Genbank gene 11161 11454 . + . ID=gene-HMPREF2844_00435;Name=HMPREF2844_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00435 KV808161.1 Protein Homology CDS 11161 11454 . + 0 ID=cds-OFJ81769.1;Parent=gene-HMPREF2844_00435;Dbxref=NCBI_GP:OFJ81769.1;Name=OFJ81769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175004.1;locus_tag=HMPREF2844_00435;product=transcriptional regulator;protein_id=OFJ81769.1;transl_table=11 KV808161.1 Genbank gene 11591 14419 . + . ID=gene-HMPREF2844_00440;Name=HMPREF2844_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00440 KV808161.1 Protein Homology CDS 11591 14419 . + 0 ID=cds-OFJ81770.1;Parent=gene-HMPREF2844_00440;Dbxref=NCBI_GP:OFJ81770.1;Name=OFJ81770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815966.1;locus_tag=HMPREF2844_00440;product=valine--tRNA ligase;protein_id=OFJ81770.1;transl_table=11 KV808161.1 Genbank gene 14493 14726 . + . ID=gene-HMPREF2844_00445;Name=HMPREF2844_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00445 KV808161.1 Protein Homology CDS 14493 14726 . + 0 ID=cds-OFJ81771.1;Parent=gene-HMPREF2844_00445;Dbxref=NCBI_GP:OFJ81771.1;Name=OFJ81771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760467.1;locus_tag=HMPREF2844_00445;product=enterochelin ABC transporter;protein_id=OFJ81771.1;transl_table=11 KV808161.1 Genbank gene 14981 15763 . - . ID=gene-HMPREF2844_00450;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=HMPREF2844_00450 KV808161.1 Protein Homology CDS 14981 15763 . - 0 ID=cds-OFJ81772.1;Parent=gene-HMPREF2844_00450;Dbxref=NCBI_GP:OFJ81772.1;Name=OFJ81772.1;Note=involved in tryptophan biosynthesis%3B amino acid biosynthesis%3B converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water;gbkey=CDS;gene=trpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581314.1;locus_tag=HMPREF2844_00450;product=indole-3-glycerol-phosphate synthase;protein_id=OFJ81772.1;transl_table=11 KV808161.1 Genbank gene 15889 16320 . - . ID=gene-HMPREF2844_00455;Name=HMPREF2844_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00455 KV808161.1 Protein Homology CDS 15889 16320 . - 0 ID=cds-OFJ81773.1;Parent=gene-HMPREF2844_00455;Dbxref=NCBI_GP:OFJ81773.1;Name=OFJ81773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674689.1;locus_tag=HMPREF2844_00455;product=hypothetical protein;protein_id=OFJ81773.1;transl_table=11 KV808161.1 Genbank gene 16506 16581 . + . ID=gene-HMPREF2844_00460;Name=HMPREF2844_00460;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_00460 KV808161.1 tRNAscan-SE tRNA 16506 16581 . + . ID=rna-HMPREF2844_00460;Parent=gene-HMPREF2844_00460;anticodon=(pos:16539..16541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00460;product=tRNA-Lys KV808161.1 tRNAscan-SE exon 16506 16581 . + . ID=exon-HMPREF2844_00460-1;Parent=rna-HMPREF2844_00460;anticodon=(pos:16539..16541);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00460;product=tRNA-Lys KV808161.1 Genbank gene 16723 18165 . + . ID=gene-HMPREF2844_00465;Name=HMPREF2844_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00465 KV808161.1 Protein Homology CDS 16723 18165 . + 0 ID=cds-OFJ81774.1;Parent=gene-HMPREF2844_00465;Dbxref=NCBI_GP:OFJ81774.1;Name=OFJ81774.1;Note=NAD-linked;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449564.1;locus_tag=HMPREF2844_00465;product=aldehyde dehydrogenase;protein_id=OFJ81774.1;transl_table=11 KV808161.1 Genbank gene 18344 19855 . + . ID=gene-HMPREF2844_00470;Name=HMPREF2844_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00470 KV808161.1 Protein Homology CDS 18344 19855 . + 0 ID=cds-OFJ81775.1;Parent=gene-HMPREF2844_00470;Dbxref=NCBI_GP:OFJ81775.1;Name=OFJ81775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313040.1;locus_tag=HMPREF2844_00470;product=lysine--tRNA ligase;protein_id=OFJ81775.1;transl_table=11 KV808161.1 Genbank gene 20080 20784 . + . ID=gene-HMPREF2844_00475;Name=HMPREF2844_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00475 KV808161.1 Protein Homology CDS 20080 20784 . + 0 ID=cds-OFJ81776.1;Parent=gene-HMPREF2844_00475;Dbxref=NCBI_GP:OFJ81776.1;Name=OFJ81776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749320.1;locus_tag=HMPREF2844_00475;product=septum site-determining protein MinC;protein_id=OFJ81776.1;transl_table=11 KV808161.1 Genbank gene 20812 21627 . + . ID=gene-HMPREF2844_00480;Name=HMPREF2844_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00480 KV808161.1 Protein Homology CDS 20812 21627 . + 0 ID=cds-OFJ81777.1;Parent=gene-HMPREF2844_00480;Dbxref=NCBI_GP:OFJ81777.1;Name=OFJ81777.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175065.1;locus_tag=HMPREF2844_00480;product=septum site-determining protein MinD;protein_id=OFJ81777.1;transl_table=11 KV808161.1 Genbank gene 21631 21906 . + . ID=gene-HMPREF2844_00485;Name=HMPREF2844_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00485 KV808161.1 Protein Homology CDS 21631 21906 . + 0 ID=cds-OFJ81778.1;Parent=gene-HMPREF2844_00485;Dbxref=NCBI_GP:OFJ81778.1;Name=OFJ81778.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765670.1;locus_tag=HMPREF2844_00485;product=cell division topological specificity factor MinE;protein_id=OFJ81778.1;transl_table=11 KV808161.1 Genbank gene 21910 22830 . + . ID=gene-HMPREF2844_00490;Name=HMPREF2844_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00490 KV808161.1 Protein Homology CDS 21910 22830 . + 0 ID=cds-OFJ81779.1;Parent=gene-HMPREF2844_00490;Dbxref=NCBI_GP:OFJ81779.1;Name=OFJ81779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749313.1;locus_tag=HMPREF2844_00490;product=LysR family transcriptional regulator;protein_id=OFJ81779.1;transl_table=11 KV808161.1 Genbank gene 23058 23867 . - . ID=gene-HMPREF2844_00495;Name=HMPREF2844_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00495 KV808161.1 Protein Homology CDS 23058 23867 . - 0 ID=cds-OFJ81442.1;Parent=gene-HMPREF2844_00495;Dbxref=NCBI_GP:OFJ81442.1;Name=OFJ81442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742773.1;locus_tag=HMPREF2844_00495;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=OFJ81442.1;transl_table=11 KV808161.1 Genbank gene 23883 24266 . - . ID=gene-HMPREF2844_00500;Name=HMPREF2844_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00500 KV808161.1 Protein Homology CDS 23883 24266 . - 0 ID=cds-OFJ81443.1;Parent=gene-HMPREF2844_00500;Dbxref=NCBI_GP:OFJ81443.1;Name=OFJ81443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780297.1;locus_tag=HMPREF2844_00500;product=outer membrane assembly protein BamE;protein_id=OFJ81443.1;transl_table=11 KV808161.1 Genbank gene 24477 24911 . + . ID=gene-HMPREF2844_00505;Name=HMPREF2844_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00505 KV808161.1 Protein Homology CDS 24477 24911 . + 0 ID=cds-OFJ81444.1;Parent=gene-HMPREF2844_00505;Dbxref=NCBI_GP:OFJ81444.1;Name=OFJ81444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686936.1;locus_tag=HMPREF2844_00505;product=transcriptional repressor;protein_id=OFJ81444.1;transl_table=11 KV808161.1 Genbank gene 25191 25916 . + . ID=gene-HMPREF2844_00510;Name=HMPREF2844_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00510 KV808161.1 Protein Homology CDS 25191 25916 . + 0 ID=cds-OFJ81445.1;Parent=gene-HMPREF2844_00510;Dbxref=NCBI_GP:OFJ81445.1;Name=OFJ81445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757197.1;locus_tag=HMPREF2844_00510;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=OFJ81445.1;transl_table=11 KV808161.1 Genbank gene 26241 26702 . - . ID=gene-HMPREF2844_00515;Name=HMPREF2844_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00515 KV808161.1 Protein Homology CDS 26241 26702 . - 0 ID=cds-OFJ81446.1;Parent=gene-HMPREF2844_00515;Dbxref=NCBI_GP:OFJ81446.1;Name=OFJ81446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676555.1;locus_tag=HMPREF2844_00515;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=OFJ81446.1;transl_table=11 KV808161.1 Genbank gene 26898 27770 . - . ID=gene-HMPREF2844_00520;Name=HMPREF2844_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00520 KV808161.1 Protein Homology CDS 26898 27770 . - 0 ID=cds-OFJ81447.1;Parent=gene-HMPREF2844_00520;Dbxref=NCBI_GP:OFJ81447.1;Name=OFJ81447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271616.1;locus_tag=HMPREF2844_00520;product=hypothetical protein;protein_id=OFJ81447.1;transl_table=11 KV808161.1 Genbank gene 27805 28074 . - . ID=gene-HMPREF2844_00525;Name=HMPREF2844_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00525 KV808161.1 Protein Homology CDS 27805 28074 . - 0 ID=cds-OFJ81448.1;Parent=gene-HMPREF2844_00525;Dbxref=NCBI_GP:OFJ81448.1;Name=OFJ81448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759357.1;locus_tag=HMPREF2844_00525;product=BolA family transcriptional regulator;protein_id=OFJ81448.1;transl_table=11 KV808161.1 Genbank gene 28074 28364 . - . ID=gene-HMPREF2844_00530;Name=HMPREF2844_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00530 KV808161.1 Protein Homology CDS 28074 28364 . - 0 ID=cds-OFJ81449.1;Parent=gene-HMPREF2844_00530;Dbxref=NCBI_GP:OFJ81449.1;Name=OFJ81449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679421.1;locus_tag=HMPREF2844_00530;product=hypothetical protein;protein_id=OFJ81449.1;transl_table=11 KV808161.1 Genbank gene 28368 28898 . - . ID=gene-HMPREF2844_00535;Name=HMPREF2844_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00535 KV808161.1 Protein Homology CDS 28368 28898 . - 0 ID=cds-OFJ81450.1;Parent=gene-HMPREF2844_00535;Dbxref=NCBI_GP:OFJ81450.1;Name=OFJ81450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711205.1;locus_tag=HMPREF2844_00535;product=septation protein A;protein_id=OFJ81450.1;transl_table=11 KV808161.1 Genbank gene 29241 31706 . + . ID=gene-HMPREF2844_00540;Name=HMPREF2844_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00540 KV808161.1 Protein Homology CDS 29241 31706 . + 0 ID=cds-OFJ81451.1;Parent=gene-HMPREF2844_00540;Dbxref=NCBI_GP:OFJ81451.1;Name=OFJ81451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271620.1;locus_tag=HMPREF2844_00540;product=TspA protein;protein_id=OFJ81451.1;transl_table=11 KV808161.1 Genbank gene 31841 32650 . + . ID=gene-HMPREF2844_00545;Name=HMPREF2844_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00545 KV808161.1 Protein Homology CDS 31841 32650 . + 0 ID=cds-OFJ81452.1;Parent=gene-HMPREF2844_00545;Dbxref=NCBI_GP:OFJ81452.1;Name=OFJ81452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679414.1;locus_tag=HMPREF2844_00545;product=tRNA pseudouridine(38-40) synthase;protein_id=OFJ81452.1;transl_table=11 ##sequence-region KV808162.1 1 14667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808162.1 Genbank region 1 14667 . + . ID=KV808162.1:1..14667;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808162.1 Genbank gene 97 1890 . - . ID=gene-HMPREF2844_00550;Name=HMPREF2844_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00550 KV808162.1 Protein Homology CDS 97 1890 . - 0 ID=cds-OFJ81031.1;Parent=gene-HMPREF2844_00550;Dbxref=NCBI_GP:OFJ81031.1;Name=OFJ81031.1;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778014.1;locus_tag=HMPREF2844_00550;product=2-isopropylmalate synthase;protein_id=OFJ81031.1;transl_table=11 KV808162.1 Genbank gene 2138 3145 . - . ID=gene-HMPREF2844_00555;Name=HMPREF2844_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00555 KV808162.1 Protein Homology CDS 2138 3145 . - 0 ID=cds-OFJ81032.1;Parent=gene-HMPREF2844_00555;Dbxref=NCBI_GP:OFJ81032.1;Name=OFJ81032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270027.1;locus_tag=HMPREF2844_00555;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=OFJ81032.1;transl_table=11 KV808162.1 Genbank gene 3252 4682 . - . ID=gene-HMPREF2844_00560;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=HMPREF2844_00560 KV808162.1 Protein Homology CDS 3252 4682 . - 0 ID=cds-OFJ81033.1;Parent=gene-HMPREF2844_00560;Dbxref=NCBI_GP:OFJ81033.1;Name=OFJ81033.1;Note=allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases%3B reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA;gbkey=CDS;gene=gatB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003698528.1;locus_tag=HMPREF2844_00560;product=aspartyl/glutamyl-tRNA amidotransferase subunit B;protein_id=OFJ81033.1;transl_table=11 KV808162.1 Genbank gene 4784 5656 . - . ID=gene-HMPREF2844_00565;Name=HMPREF2844_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00565 KV808162.1 Protein Homology CDS 4784 5656 . - 0 ID=cds-OFJ81042.1;Parent=gene-HMPREF2844_00565;Dbxref=NCBI_GP:OFJ81042.1;Name=OFJ81042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778909.1;locus_tag=HMPREF2844_00565;product=hypothetical protein;protein_id=OFJ81042.1;transl_table=11 KV808162.1 Genbank gene 5656 7113 . - . ID=gene-HMPREF2844_00570;Name=HMPREF2844_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00570 KV808162.1 Protein Homology CDS 5656 7113 . - 0 ID=cds-OFJ81034.1;Parent=gene-HMPREF2844_00570;Dbxref=NCBI_GP:OFJ81034.1;Name=OFJ81034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270030.1;locus_tag=HMPREF2844_00570;product=aspartyl/glutamyl-tRNA amidotransferase subunit A;protein_id=OFJ81034.1;transl_table=11 KV808162.1 Genbank gene 7285 7575 . - . ID=gene-HMPREF2844_00575;Name=HMPREF2844_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00575 KV808162.1 Protein Homology CDS 7285 7575 . - 0 ID=cds-OFJ81035.1;Parent=gene-HMPREF2844_00575;Dbxref=NCBI_GP:OFJ81035.1;Name=OFJ81035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117012.1;locus_tag=HMPREF2844_00575;product=asparaginyl/glutamyl-tRNA amidotransferase subunit C;protein_id=OFJ81035.1;transl_table=11 KV808162.1 Genbank gene 7803 8840 . + . ID=gene-HMPREF2844_00580;Name=HMPREF2844_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00580 KV808162.1 Protein Homology CDS 7803 8840 . + 0 ID=cds-OFJ81036.1;Parent=gene-HMPREF2844_00580;Dbxref=NCBI_GP:OFJ81036.1;Name=OFJ81036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270031.1;locus_tag=HMPREF2844_00580;product=rod shape-determining protein;protein_id=OFJ81036.1;transl_table=11 KV808162.1 Genbank gene 8852 9691 . + . ID=gene-HMPREF2844_00585;Name=HMPREF2844_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00585 KV808162.1 Protein Homology CDS 8852 9691 . + 0 ID=cds-OFJ81037.1;Parent=gene-HMPREF2844_00585;Dbxref=NCBI_GP:OFJ81037.1;Name=OFJ81037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756288.1;locus_tag=HMPREF2844_00585;product=rod shape-determining protein MreC;protein_id=OFJ81037.1;transl_table=11 KV808162.1 Genbank gene 9699 10202 . + . ID=gene-HMPREF2844_00590;Name=HMPREF2844_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00590 KV808162.1 Protein Homology CDS 9699 10202 . + 0 ID=cds-OFJ81038.1;Parent=gene-HMPREF2844_00590;Dbxref=NCBI_GP:OFJ81038.1;Name=OFJ81038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756286.1;locus_tag=HMPREF2844_00590;product=rod shape-determining protein MreD;protein_id=OFJ81038.1;transl_table=11 KV808162.1 Genbank gene 10230 12251 . + . ID=gene-HMPREF2844_00595;Name=HMPREF2844_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00595 KV808162.1 Protein Homology CDS 10230 12251 . + 0 ID=cds-OFJ81043.1;Parent=gene-HMPREF2844_00595;Dbxref=NCBI_GP:OFJ81043.1;Name=OFJ81043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763645.1;locus_tag=HMPREF2844_00595;product=penicillin-binding protein 2;protein_id=OFJ81043.1;transl_table=11 KV808162.1 Genbank gene 12244 13407 . + . ID=gene-HMPREF2844_00600;Name=HMPREF2844_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00600 KV808162.1 Protein Homology CDS 12244 13407 . + 0 ID=cds-OFJ81039.1;Parent=gene-HMPREF2844_00600;Dbxref=NCBI_GP:OFJ81039.1;Name=OFJ81039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778895.1;locus_tag=HMPREF2844_00600;product=rod shape-determining protein RodA;protein_id=OFJ81039.1;transl_table=11 KV808162.1 Genbank gene 13419 14075 . + . ID=gene-HMPREF2844_00605;Name=HMPREF2844_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00605 KV808162.1 Protein Homology CDS 13419 14075 . + 0 ID=cds-OFJ81040.1;Parent=gene-HMPREF2844_00605;Dbxref=NCBI_GP:OFJ81040.1;Name=OFJ81040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221757.1;locus_tag=HMPREF2844_00605;product=hypothetical protein;protein_id=OFJ81040.1;transl_table=11 KV808162.1 Genbank gene 14252 14623 . + . ID=gene-HMPREF2844_00610;Name=HMPREF2844_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00610 KV808162.1 Protein Homology CDS 14252 14623 . + 0 ID=cds-OFJ81041.1;Parent=gene-HMPREF2844_00610;Dbxref=NCBI_GP:OFJ81041.1;Name=OFJ81041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270035.1;locus_tag=HMPREF2844_00610;product=hypothetical protein;protein_id=OFJ81041.1;transl_table=11 ##sequence-region KV808163.1 1 12186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808163.1 Genbank region 1 12186 . + . ID=KV808163.1:1..12186;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808163.1 Genbank gene 343 1623 . - . ID=gene-HMPREF2844_00615;Name=HMPREF2844_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00615 KV808163.1 GeneMarkS+ CDS 343 1623 . - 0 ID=cds-OFJ80256.1;Parent=gene-HMPREF2844_00615;Dbxref=NCBI_GP:OFJ80256.1;Name=OFJ80256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_00615;product=hypothetical protein;protein_id=OFJ80256.1;transl_table=11 KV808163.1 Genbank gene 1624 1872 . + . ID=gene-HMPREF2844_00620;Name=HMPREF2844_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00620 KV808163.1 Protein Homology CDS 1624 1872 . + 0 ID=cds-OFJ80257.1;Parent=gene-HMPREF2844_00620;Dbxref=NCBI_GP:OFJ80257.1;Name=OFJ80257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684029.1;locus_tag=HMPREF2844_00620;product=hypothetical protein;protein_id=OFJ80257.1;transl_table=11 KV808163.1 Genbank gene 2127 4373 . - . ID=gene-HMPREF2844_00625;Name=HMPREF2844_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00625 KV808163.1 GeneMarkS+ CDS 2127 4373 . - 0 ID=cds-OFJ80258.1;Parent=gene-HMPREF2844_00625;Dbxref=NCBI_GP:OFJ80258.1;Name=OFJ80258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_00625;product=hypothetical protein;protein_id=OFJ80258.1;transl_table=11 KV808163.1 Genbank gene 4450 7935 . - . ID=gene-HMPREF2844_00630;Name=HMPREF2844_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00630 KV808163.1 Protein Homology CDS 4450 7935 . - 0 ID=cds-OFJ80259.1;Parent=gene-HMPREF2844_00630;Dbxref=NCBI_GP:OFJ80259.1;Name=OFJ80259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002223146.1;locus_tag=HMPREF2844_00630;product=ATP-dependent helicase;protein_id=OFJ80259.1;transl_table=11 KV808163.1 Genbank gene 8004 9578 . - . ID=gene-HMPREF2844_00635;Name=HMPREF2844_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00635 KV808163.1 Protein Homology CDS 8004 9578 . - 0 ID=cds-OFJ80260.1;Parent=gene-HMPREF2844_00635;Dbxref=NCBI_GP:OFJ80260.1;Name=OFJ80260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742577.1;locus_tag=HMPREF2844_00635;product=protein DcaA;protein_id=OFJ80260.1;transl_table=11 KV808163.1 Genbank gene 9739 10407 . - . ID=gene-HMPREF2844_00640;Name=HMPREF2844_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00640 KV808163.1 GeneMarkS+ CDS 9739 10407 . - 0 ID=cds-OFJ80261.1;Parent=gene-HMPREF2844_00640;Dbxref=NCBI_GP:OFJ80261.1;Name=OFJ80261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_00640;product=hypothetical protein;protein_id=OFJ80261.1;transl_table=11 KV808163.1 Genbank pseudogene 10498 11889 . - . ID=gene-HMPREF2844_00645;Name=HMPREF2844_00645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_00645;pseudo=true KV808163.1 Protein Homology CDS 10498 11889 . - 0 ID=cds-HMPREF2844_00645;Parent=gene-HMPREF2844_00645;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118934.1;locus_tag=HMPREF2844_00645;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 ##sequence-region KV808164.1 1 15792 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808164.1 Genbank region 1 15792 . + . ID=KV808164.1:1..15792;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808164.1 Genbank gene 48 123 . + . ID=gene-HMPREF2844_00650;Name=HMPREF2844_00650;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_00650 KV808164.1 tRNAscan-SE tRNA 48 123 . + . ID=rna-HMPREF2844_00650;Parent=gene-HMPREF2844_00650;anticodon=(pos:81..83);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00650;product=tRNA-Trp KV808164.1 tRNAscan-SE exon 48 123 . + . ID=exon-HMPREF2844_00650-1;Parent=rna-HMPREF2844_00650;anticodon=(pos:81..83);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00650;product=tRNA-Trp KV808164.1 Genbank gene 243 515 . + . ID=gene-HMPREF2844_00655;Name=HMPREF2844_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00655 KV808164.1 Protein Homology CDS 243 515 . + 0 ID=cds-OFJ79478.1;Parent=gene-HMPREF2844_00655;Dbxref=NCBI_GP:OFJ79478.1;Name=OFJ79478.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760511.1;locus_tag=HMPREF2844_00655;product=preprotein translocase subunit SecE;protein_id=OFJ79478.1;transl_table=11 KV808164.1 Genbank gene 518 1051 . + . ID=gene-HMPREF2844_00660;Name=HMPREF2844_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00660 KV808164.1 Protein Homology CDS 518 1051 . + 0 ID=cds-OFJ79479.1;Parent=gene-HMPREF2844_00660;Dbxref=NCBI_GP:OFJ79479.1;Name=OFJ79479.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760509.1;locus_tag=HMPREF2844_00660;product=transcription termination/antitermination protein NusG;protein_id=OFJ79479.1;transl_table=11 KV808164.1 Genbank gene 1158 1592 . + . ID=gene-HMPREF2844_00665;Name=HMPREF2844_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00665 KV808164.1 Protein Homology CDS 1158 1592 . + 0 ID=cds-OFJ79480.1;Parent=gene-HMPREF2844_00665;Dbxref=NCBI_GP:OFJ79480.1;Name=OFJ79480.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270604.1;locus_tag=HMPREF2844_00665;product=50S ribosomal protein L11;protein_id=OFJ79480.1;transl_table=11 KV808164.1 Genbank gene 1592 2287 . + . ID=gene-HMPREF2844_00670;Name=HMPREF2844_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00670 KV808164.1 Protein Homology CDS 1592 2287 . + 0 ID=cds-OFJ79481.1;Parent=gene-HMPREF2844_00670;Dbxref=NCBI_GP:OFJ79481.1;Name=OFJ79481.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270605.1;locus_tag=HMPREF2844_00670;product=50S ribosomal protein L1;protein_id=OFJ79481.1;transl_table=11 KV808164.1 Genbank gene 2515 3015 . + . ID=gene-HMPREF2844_00675;Name=HMPREF2844_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00675 KV808164.1 Protein Homology CDS 2515 3015 . + 0 ID=cds-OFJ79482.1;Parent=gene-HMPREF2844_00675;Dbxref=NCBI_GP:OFJ79482.1;Name=OFJ79482.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690107.1;locus_tag=HMPREF2844_00675;product=50S ribosomal protein L10;protein_id=OFJ79482.1;transl_table=11 KV808164.1 Genbank gene 3074 3445 . + . ID=gene-HMPREF2844_00680;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF2844_00680 KV808164.1 Protein Homology CDS 3074 3445 . + 0 ID=cds-OFJ79483.1;Parent=gene-HMPREF2844_00680;Dbxref=NCBI_GP:OFJ79483.1;Name=OFJ79483.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749262.1;locus_tag=HMPREF2844_00680;product=50S ribosomal protein L7/L12;protein_id=OFJ79483.1;transl_table=11 KV808164.1 Genbank gene 3634 7812 . + . ID=gene-HMPREF2844_00685;Name=HMPREF2844_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00685 KV808164.1 Protein Homology CDS 3634 7812 . + 0 ID=cds-OFJ79484.1;Parent=gene-HMPREF2844_00685;Dbxref=NCBI_GP:OFJ79484.1;Name=OFJ79484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235366.1;locus_tag=HMPREF2844_00685;product=DNA-directed RNA polymerase subunit beta;protein_id=OFJ79484.1;transl_table=11 KV808164.1 Genbank gene 7978 12153 . + . ID=gene-HMPREF2844_00690;Name=HMPREF2844_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00690 KV808164.1 Protein Homology CDS 7978 12153 . + 0 ID=cds-OFJ79485.1;Parent=gene-HMPREF2844_00690;Dbxref=NCBI_GP:OFJ79485.1;Name=OFJ79485.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215378.1;locus_tag=HMPREF2844_00690;product=DNA-directed RNA polymerase subunit beta';protein_id=OFJ79485.1;transl_table=11 KV808164.1 Genbank gene 12506 12877 . + . ID=gene-HMPREF2844_00695;Name=HMPREF2844_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00695 KV808164.1 Protein Homology CDS 12506 12877 . + 0 ID=cds-OFJ79486.1;Parent=gene-HMPREF2844_00695;Dbxref=NCBI_GP:OFJ79486.1;Name=OFJ79486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218431.1;locus_tag=HMPREF2844_00695;product=30S ribosomal protein S12;protein_id=OFJ79486.1;transl_table=11 KV808164.1 Genbank gene 12995 13465 . + . ID=gene-HMPREF2844_00700;Name=HMPREF2844_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00700 KV808164.1 Protein Homology CDS 12995 13465 . + 0 ID=cds-OFJ79487.1;Parent=gene-HMPREF2844_00700;Dbxref=NCBI_GP:OFJ79487.1;Name=OFJ79487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=HMPREF2844_00700;product=30S ribosomal protein S7;protein_id=OFJ79487.1;transl_table=11 KV808164.1 Genbank gene 13484 15589 . + . ID=gene-HMPREF2844_00705;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF2844_00705 KV808164.1 Protein Homology CDS 13484 15589 . + 0 ID=cds-OFJ79488.1;Parent=gene-HMPREF2844_00705;Dbxref=NCBI_GP:OFJ79488.1;Name=OFJ79488.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273262.1;locus_tag=HMPREF2844_00705;product=elongation factor G;protein_id=OFJ79488.1;transl_table=11 KV808164.1 Genbank pseudogene 15678 15792 . + . ID=gene-HMPREF2844_00710;Name=HMPREF2844_00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_00710;pseudo=true KV808164.1 Protein Homology CDS 15678 15792 . + 0 ID=cds-HMPREF2844_00710;Parent=gene-HMPREF2844_00710;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252421.1;locus_tag=HMPREF2844_00710;product=elongation factor Tu;pseudo=true;transl_table=11 ##sequence-region KV808165.1 1 8741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808165.1 Genbank region 1 8741 . + . ID=KV808165.1:1..8741;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808165.1 Genbank gene 136 699 . + . ID=gene-HMPREF2844_00715;Name=HMPREF2844_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00715 KV808165.1 Protein Homology CDS 136 699 . + 0 ID=cds-OFJ79437.1;Parent=gene-HMPREF2844_00715;Dbxref=NCBI_GP:OFJ79437.1;Name=OFJ79437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311439.1;locus_tag=HMPREF2844_00715;product=hypothetical protein;protein_id=OFJ79437.1;transl_table=11 KV808165.1 Genbank gene 849 1415 . + . ID=gene-HMPREF2844_00720;Name=HMPREF2844_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00720 KV808165.1 Protein Homology CDS 849 1415 . + 0 ID=cds-OFJ79438.1;Parent=gene-HMPREF2844_00720;Dbxref=NCBI_GP:OFJ79438.1;Name=OFJ79438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284906.1;locus_tag=HMPREF2844_00720;product=peptidylprolyl isomerase;protein_id=OFJ79438.1;transl_table=11 KV808165.1 Genbank gene 1527 2012 . - . ID=gene-HMPREF2844_00725;Name=HMPREF2844_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00725 KV808165.1 Protein Homology CDS 1527 2012 . - 0 ID=cds-OFJ79446.1;Parent=gene-HMPREF2844_00725;Dbxref=NCBI_GP:OFJ79446.1;Name=OFJ79446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520796.1;locus_tag=HMPREF2844_00725;product=hypothetical protein;protein_id=OFJ79446.1;transl_table=11 KV808165.1 Genbank gene 2138 2494 . - . ID=gene-HMPREF2844_00730;Name=HMPREF2844_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00730 KV808165.1 Protein Homology CDS 2138 2494 . - 0 ID=cds-OFJ79447.1;Parent=gene-HMPREF2844_00730;Dbxref=NCBI_GP:OFJ79447.1;Name=OFJ79447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311490.1;locus_tag=HMPREF2844_00730;product=ArsR family transcriptional regulator;protein_id=OFJ79447.1;transl_table=11 KV808165.1 Genbank gene 2658 3530 . + . ID=gene-HMPREF2844_00735;Name=HMPREF2844_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00735 KV808165.1 Protein Homology CDS 2658 3530 . + 0 ID=cds-OFJ79439.1;Parent=gene-HMPREF2844_00735;Dbxref=NCBI_GP:OFJ79439.1;Name=OFJ79439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764767.1;locus_tag=HMPREF2844_00735;product=short-chain dehydrogenase;protein_id=OFJ79439.1;transl_table=11 KV808165.1 Genbank gene 3949 4200 . + . ID=gene-HMPREF2844_00740;Name=HMPREF2844_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00740 KV808165.1 Protein Homology CDS 3949 4200 . + 0 ID=cds-OFJ79440.1;Parent=gene-HMPREF2844_00740;Dbxref=NCBI_GP:OFJ79440.1;Name=OFJ79440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761186.1;locus_tag=HMPREF2844_00740;product=hypothetical protein;protein_id=OFJ79440.1;transl_table=11 KV808165.1 Genbank gene 4243 4572 . + . ID=gene-HMPREF2844_00745;Name=HMPREF2844_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00745 KV808165.1 Protein Homology CDS 4243 4572 . + 0 ID=cds-OFJ79441.1;Parent=gene-HMPREF2844_00745;Dbxref=NCBI_GP:OFJ79441.1;Name=OFJ79441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675295.1;locus_tag=HMPREF2844_00745;product=hypothetical protein;protein_id=OFJ79441.1;transl_table=11 KV808165.1 Genbank gene 4734 6515 . - . ID=gene-HMPREF2844_00750;Name=HMPREF2844_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00750 KV808165.1 Protein Homology CDS 4734 6515 . - 0 ID=cds-OFJ79442.1;Parent=gene-HMPREF2844_00750;Dbxref=NCBI_GP:OFJ79442.1;Name=OFJ79442.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679031.1;locus_tag=HMPREF2844_00750;product=ribonucleoside-triphosphate reductase;protein_id=OFJ79442.1;transl_table=11 KV808165.1 Genbank gene 6550 7086 . - . ID=gene-HMPREF2844_00755;Name=HMPREF2844_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00755 KV808165.1 Protein Homology CDS 6550 7086 . - 0 ID=cds-OFJ79443.1;Parent=gene-HMPREF2844_00755;Dbxref=NCBI_GP:OFJ79443.1;Name=OFJ79443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765419.1;locus_tag=HMPREF2844_00755;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=OFJ79443.1;transl_table=11 KV808165.1 Genbank gene 7707 8096 . + . ID=gene-HMPREF2844_00760;Name=HMPREF2844_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00760 KV808165.1 Protein Homology CDS 7707 8096 . + 0 ID=cds-OFJ79444.1;Parent=gene-HMPREF2844_00760;Dbxref=NCBI_GP:OFJ79444.1;Name=OFJ79444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768017.1;locus_tag=HMPREF2844_00760;product=hypothetical protein;protein_id=OFJ79444.1;transl_table=11 KV808165.1 Genbank gene 8207 8431 . - . ID=gene-HMPREF2844_00765;Name=HMPREF2844_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00765 KV808165.1 Protein Homology CDS 8207 8431 . - 0 ID=cds-OFJ79445.1;Parent=gene-HMPREF2844_00765;Dbxref=NCBI_GP:OFJ79445.1;Name=OFJ79445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221558.1;locus_tag=HMPREF2844_00765;product=transposase;protein_id=OFJ79445.1;transl_table=11 ##sequence-region KV808166.1 1 51633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808166.1 Genbank region 1 51633 . + . ID=KV808166.1:1..51633;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808166.1 Genbank gene 391 663 . - . ID=gene-HMPREF2844_00770;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF2844_00770 KV808166.1 Protein Homology CDS 391 663 . - 0 ID=cds-OFJ79289.1;Parent=gene-HMPREF2844_00770;Dbxref=NCBI_GP:OFJ79289.1;Name=OFJ79289.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686478.1;locus_tag=HMPREF2844_00770;product=50S ribosomal protein L27;protein_id=OFJ79289.1;transl_table=11 KV808166.1 Genbank gene 689 1009 . - . ID=gene-HMPREF2844_00775;Name=HMPREF2844_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00775 KV808166.1 Protein Homology CDS 689 1009 . - 0 ID=cds-OFJ79290.1;Parent=gene-HMPREF2844_00775;Dbxref=NCBI_GP:OFJ79290.1;Name=OFJ79290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341688.1;locus_tag=HMPREF2844_00775;product=50S ribosomal protein L21;protein_id=OFJ79290.1;transl_table=11 KV808166.1 Genbank gene 1260 2234 . + . ID=gene-HMPREF2844_00780;Name=HMPREF2844_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00780 KV808166.1 Protein Homology CDS 1260 2234 . + 0 ID=cds-OFJ79291.1;Parent=gene-HMPREF2844_00780;Dbxref=NCBI_GP:OFJ79291.1;Name=OFJ79291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750327.1;locus_tag=HMPREF2844_00780;product=octaprenyl diphosphate synthase;protein_id=OFJ79291.1;transl_table=11 KV808166.1 Genbank gene 2240 2686 . + . ID=gene-HMPREF2844_00785;Name=HMPREF2844_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00785 KV808166.1 Protein Homology CDS 2240 2686 . + 0 ID=cds-OFJ79292.1;Parent=gene-HMPREF2844_00785;Dbxref=NCBI_GP:OFJ79292.1;Name=OFJ79292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680097.1;locus_tag=HMPREF2844_00785;product=hypothetical protein;protein_id=OFJ79292.1;transl_table=11 KV808166.1 Genbank gene 2691 2765 . + . ID=gene-HMPREF2844_00790;Name=HMPREF2844_00790;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_00790 KV808166.1 tRNAscan-SE tRNA 2691 2765 . + . ID=rna-HMPREF2844_00790;Parent=gene-HMPREF2844_00790;anticodon=(pos:2724..2726);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00790;product=tRNA-Arg KV808166.1 tRNAscan-SE exon 2691 2765 . + . ID=exon-HMPREF2844_00790-1;Parent=rna-HMPREF2844_00790;anticodon=(pos:2724..2726);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_00790;product=tRNA-Arg KV808166.1 Genbank gene 2984 4168 . + . ID=gene-HMPREF2844_00795;Name=HMPREF2844_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00795 KV808166.1 Protein Homology CDS 2984 4168 . + 0 ID=cds-OFJ79293.1;Parent=gene-HMPREF2844_00795;Dbxref=NCBI_GP:OFJ79293.1;Name=OFJ79293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235438.1;locus_tag=HMPREF2844_00795;product=ubiquinone biosynthesis protein UbiH;protein_id=OFJ79293.1;transl_table=11 KV808166.1 Genbank gene 4311 4466 . - . ID=gene-HMPREF2844_00800;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF2844_00800 KV808166.1 Protein Homology CDS 4311 4466 . - 0 ID=cds-OFJ79294.1;Parent=gene-HMPREF2844_00800;Dbxref=NCBI_GP:OFJ79294.1;Name=OFJ79294.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012696028.1;locus_tag=HMPREF2844_00800;product=50S ribosomal protein L33;protein_id=OFJ79294.1;transl_table=11 KV808166.1 Genbank gene 4495 4728 . - . ID=gene-HMPREF2844_00805;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HMPREF2844_00805 KV808166.1 Protein Homology CDS 4495 4728 . - 0 ID=cds-OFJ79295.1;Parent=gene-HMPREF2844_00805;Dbxref=NCBI_GP:OFJ79295.1;Name=OFJ79295.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=HMPREF2844_00805;product=50S ribosomal protein L28;protein_id=OFJ79295.1;transl_table=11 KV808166.1 Genbank gene 5006 6535 . - . ID=gene-HMPREF2844_00810;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=HMPREF2844_00810 KV808166.1 Protein Homology CDS 5006 6535 . - 0 ID=cds-OFJ79296.1;Parent=gene-HMPREF2844_00810;Dbxref=NCBI_GP:OFJ79296.1;Name=OFJ79296.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680001.1;locus_tag=HMPREF2844_00810;product=multidrug resistance protein B;protein_id=OFJ79296.1;transl_table=11 KV808166.1 Genbank gene 6724 7914 . - . ID=gene-HMPREF2844_00815;Name=HMPREF2844_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00815 KV808166.1 Protein Homology CDS 6724 7914 . - 0 ID=cds-OFJ79297.1;Parent=gene-HMPREF2844_00815;Dbxref=NCBI_GP:OFJ79297.1;Name=OFJ79297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757026.1;locus_tag=HMPREF2844_00815;product=hemolysin D;protein_id=OFJ79297.1;transl_table=11 KV808166.1 Genbank gene 8576 9787 . - . ID=gene-HMPREF2844_00820;Name=HMPREF2844_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00820 KV808166.1 Protein Homology CDS 8576 9787 . - 0 ID=cds-OFJ79298.1;Parent=gene-HMPREF2844_00820;Dbxref=NCBI_GP:OFJ79298.1;Name=OFJ79298.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765011.1;locus_tag=HMPREF2844_00820;product=acetate kinase;protein_id=OFJ79298.1;transl_table=11 KV808166.1 Genbank gene 10100 11269 . - . ID=gene-HMPREF2844_00825;Name=HMPREF2844_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00825 KV808166.1 Protein Homology CDS 10100 11269 . - 0 ID=cds-OFJ79299.1;Parent=gene-HMPREF2844_00825;Dbxref=NCBI_GP:OFJ79299.1;Name=OFJ79299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779825.1;locus_tag=HMPREF2844_00825;product=3-methylitaconate isomerase;protein_id=OFJ79299.1;transl_table=11 KV808166.1 Genbank gene 11311 13920 . - . ID=gene-HMPREF2844_00830;Name=HMPREF2844_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00830 KV808166.1 Protein Homology CDS 11311 13920 . - 0 ID=cds-OFJ79300.1;Parent=gene-HMPREF2844_00830;Dbxref=NCBI_GP:OFJ79300.1;Name=OFJ79300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285800.1;locus_tag=HMPREF2844_00830;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=OFJ79300.1;transl_table=11 KV808166.1 Genbank gene 14023 15228 . - . ID=gene-HMPREF2844_00835;Name=HMPREF2844_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00835 KV808166.1 Protein Homology CDS 14023 15228 . - 0 ID=cds-OFJ79301.1;Parent=gene-HMPREF2844_00835;Dbxref=NCBI_GP:OFJ79301.1;Name=OFJ79301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008314316.1;locus_tag=HMPREF2844_00835;product=hypothetical protein;protein_id=OFJ79301.1;transl_table=11 KV808166.1 Genbank gene 15253 15975 . - . ID=gene-HMPREF2844_00840;Name=HMPREF2844_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00840 KV808166.1 Protein Homology CDS 15253 15975 . - 0 ID=cds-OFJ79302.1;Parent=gene-HMPREF2844_00840;Dbxref=NCBI_GP:OFJ79302.1;Name=OFJ79302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241125.1;locus_tag=HMPREF2844_00840;product=D-alanyl-D-alanine dipeptidase;protein_id=OFJ79302.1;transl_table=11 KV808166.1 Genbank gene 16068 17222 . - . ID=gene-HMPREF2844_00845;Name=HMPREF2844_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00845 KV808166.1 Protein Homology CDS 16068 17222 . - 0 ID=cds-OFJ79303.1;Parent=gene-HMPREF2844_00845;Dbxref=NCBI_GP:OFJ79303.1;Name=OFJ79303.1;Note=catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate%3B also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764982.1;locus_tag=HMPREF2844_00845;product=citrate synthase/methylcitrate synthase;protein_id=OFJ79303.1;transl_table=11 KV808166.1 Genbank gene 17302 18177 . - . ID=gene-HMPREF2844_00850;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=HMPREF2844_00850 KV808166.1 Protein Homology CDS 17302 18177 . - 0 ID=cds-OFJ79304.1;Parent=gene-HMPREF2844_00850;Dbxref=NCBI_GP:OFJ79304.1;Name=OFJ79304.1;Note=catalyzes the formation of pyruvate and succinate from 2-methylisocitrate;gbkey=CDS;gene=prpB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779818.1;locus_tag=HMPREF2844_00850;product=methylisocitrate lyase;protein_id=OFJ79304.1;transl_table=11 KV808166.1 Genbank gene 19090 20523 . - . ID=gene-HMPREF2844_00855;Name=HMPREF2844_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00855 KV808166.1 Protein Homology CDS 19090 20523 . - 0 ID=cds-OFJ79322.1;Parent=gene-HMPREF2844_00855;Dbxref=NCBI_GP:OFJ79322.1;Name=OFJ79322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271135.1;locus_tag=HMPREF2844_00855;product=MFS transporter;protein_id=OFJ79322.1;transl_table=11 KV808166.1 Genbank gene 20854 21624 . - . ID=gene-HMPREF2844_00860;Name=HMPREF2844_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00860 KV808166.1 Protein Homology CDS 20854 21624 . - 0 ID=cds-OFJ79305.1;Parent=gene-HMPREF2844_00860;Dbxref=NCBI_GP:OFJ79305.1;Name=OFJ79305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271134.1;locus_tag=HMPREF2844_00860;product=hypothetical protein;protein_id=OFJ79305.1;transl_table=11 KV808166.1 Genbank gene 21644 22906 . - . ID=gene-HMPREF2844_00865;Name=HMPREF2844_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00865 KV808166.1 Protein Homology CDS 21644 22906 . - 0 ID=cds-OFJ79306.1;Parent=gene-HMPREF2844_00865;Dbxref=NCBI_GP:OFJ79306.1;Name=OFJ79306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686976.1;locus_tag=HMPREF2844_00865;product=radical SAM protein;protein_id=OFJ79306.1;transl_table=11 KV808166.1 Genbank gene 23327 24040 . - . ID=gene-HMPREF2844_00870;Name=HMPREF2844_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00870 KV808166.1 Protein Homology CDS 23327 24040 . - 0 ID=cds-OFJ79307.1;Parent=gene-HMPREF2844_00870;Dbxref=NCBI_GP:OFJ79307.1;Name=OFJ79307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686975.1;locus_tag=HMPREF2844_00870;product=nicotinamide riboside transporter pnuC;protein_id=OFJ79307.1;transl_table=11 KV808166.1 Genbank gene 24436 25002 . + . ID=gene-HMPREF2844_00875;Name=HMPREF2844_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00875 KV808166.1 Protein Homology CDS 24436 25002 . + 0 ID=cds-OFJ79308.1;Parent=gene-HMPREF2844_00875;Dbxref=NCBI_GP:OFJ79308.1;Name=OFJ79308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312712.1;locus_tag=HMPREF2844_00875;product=oxidoreductase;protein_id=OFJ79308.1;transl_table=11 KV808166.1 Genbank gene 25094 26482 . - . ID=gene-HMPREF2844_00880;Name=HMPREF2844_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00880 KV808166.1 Protein Homology CDS 25094 26482 . - 0 ID=cds-OFJ79309.1;Parent=gene-HMPREF2844_00880;Dbxref=NCBI_GP:OFJ79309.1;Name=OFJ79309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758210.1;locus_tag=HMPREF2844_00880;product=Na+/H+ antiporter NhaC;protein_id=OFJ79309.1;transl_table=11 KV808166.1 Genbank gene 26729 27385 . - . ID=gene-HMPREF2844_00885;Name=HMPREF2844_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00885 KV808166.1 Protein Homology CDS 26729 27385 . - 0 ID=cds-OFJ79323.1;Parent=gene-HMPREF2844_00885;Dbxref=NCBI_GP:OFJ79323.1;Name=OFJ79323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271129.1;locus_tag=HMPREF2844_00885;product=hypothetical protein;protein_id=OFJ79323.1;transl_table=11 KV808166.1 Genbank gene 27577 28464 . - . ID=gene-HMPREF2844_00890;Name=HMPREF2844_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00890 KV808166.1 Protein Homology CDS 27577 28464 . - 0 ID=cds-OFJ79310.1;Parent=gene-HMPREF2844_00890;Dbxref=NCBI_GP:OFJ79310.1;Name=OFJ79310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520957.1;locus_tag=HMPREF2844_00890;product=cell division protein;protein_id=OFJ79310.1;transl_table=11 KV808166.1 Genbank gene 28647 30446 . - . ID=gene-HMPREF2844_00895;Name=HMPREF2844_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00895 KV808166.1 Protein Homology CDS 28647 30446 . - 0 ID=cds-OFJ79311.1;Parent=gene-HMPREF2844_00895;Dbxref=NCBI_GP:OFJ79311.1;Name=OFJ79311.1;Note=activates biotin to form biotinyl-5'-adenylate and transfers the biotin moiety to biotin-accepting proteins and catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis%3B type III%3B type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686970.1;locus_tag=HMPREF2844_00895;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=OFJ79311.1;transl_table=11 KV808166.1 Genbank gene 30443 30946 . - . ID=gene-HMPREF2844_00900;Name=HMPREF2844_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00900 KV808166.1 Protein Homology CDS 30443 30946 . - 0 ID=cds-OFJ79312.1;Parent=gene-HMPREF2844_00900;Dbxref=NCBI_GP:OFJ79312.1;Name=OFJ79312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768921.1;locus_tag=HMPREF2844_00900;product=ADP-heptose synthase;protein_id=OFJ79312.1;transl_table=11 KV808166.1 Genbank gene 31139 32551 . - . ID=gene-HMPREF2844_00905;Name=HMPREF2844_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00905 KV808166.1 Protein Homology CDS 31139 32551 . - 0 ID=cds-OFJ79313.1;Parent=gene-HMPREF2844_00905;Dbxref=NCBI_GP:OFJ79313.1;Name=OFJ79313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693752.1;locus_tag=HMPREF2844_00905;product=hypothetical protein;protein_id=OFJ79313.1;transl_table=11 KV808166.1 Genbank gene 32873 33349 . - . ID=gene-HMPREF2844_00910;Name=HMPREF2844_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00910 KV808166.1 Protein Homology CDS 32873 33349 . - 0 ID=cds-OFJ79314.1;Parent=gene-HMPREF2844_00910;Dbxref=NCBI_GP:OFJ79314.1;Name=OFJ79314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760475.1;locus_tag=HMPREF2844_00910;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=OFJ79314.1;transl_table=11 KV808166.1 Genbank gene 33721 36423 . + . ID=gene-HMPREF2844_00915;Name=HMPREF2844_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00915 KV808166.1 Protein Homology CDS 33721 36423 . + 0 ID=cds-OFJ79315.1;Parent=gene-HMPREF2844_00915;Dbxref=NCBI_GP:OFJ79315.1;Name=OFJ79315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271124.1;locus_tag=HMPREF2844_00915;product=phosphoenolpyruvate carboxylase;protein_id=OFJ79315.1;transl_table=11 KV808166.1 Genbank gene 36628 37974 . + . ID=gene-HMPREF2844_00920;Name=HMPREF2844_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00920 KV808166.1 Protein Homology CDS 36628 37974 . + 0 ID=cds-OFJ79316.1;Parent=gene-HMPREF2844_00920;Dbxref=NCBI_GP:OFJ79316.1;Name=OFJ79316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271123.1;locus_tag=HMPREF2844_00920;product=chloride channel protein EriC;protein_id=OFJ79316.1;transl_table=11 KV808166.1 Genbank gene 38067 39695 . - . ID=gene-HMPREF2844_00925;Name=HMPREF2844_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00925 KV808166.1 Protein Homology CDS 38067 39695 . - 0 ID=cds-OFJ79317.1;Parent=gene-HMPREF2844_00925;Dbxref=NCBI_GP:OFJ79317.1;Name=OFJ79317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743866.1;locus_tag=HMPREF2844_00925;product=glucose-6-phosphate isomerase;protein_id=OFJ79317.1;transl_table=11 KV808166.1 Genbank gene 39988 41025 . + . ID=gene-HMPREF2844_00930;Name=HMPREF2844_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00930 KV808166.1 Protein Homology CDS 39988 41025 . + 0 ID=cds-OFJ79318.1;Parent=gene-HMPREF2844_00930;Dbxref=NCBI_GP:OFJ79318.1;Name=OFJ79318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767668.1;locus_tag=HMPREF2844_00930;product=LacI family transcriptional regulator;protein_id=OFJ79318.1;transl_table=11 KV808166.1 Genbank gene 41245 42576 . + . ID=gene-HMPREF2844_00935;Name=HMPREF2844_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00935 KV808166.1 Protein Homology CDS 41245 42576 . + 0 ID=cds-OFJ79319.1;Parent=gene-HMPREF2844_00935;Dbxref=NCBI_GP:OFJ79319.1;Name=OFJ79319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756445.1;locus_tag=HMPREF2844_00935;product=sugar transporter;protein_id=OFJ79319.1;transl_table=11 KV808166.1 Genbank gene 42744 44852 . + . ID=gene-HMPREF2844_00940;Name=HMPREF2844_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00940 KV808166.1 Protein Homology CDS 42744 44852 . + 0 ID=cds-OFJ79320.1;Parent=gene-HMPREF2844_00940;Dbxref=NCBI_GP:OFJ79320.1;Name=OFJ79320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271120.1;locus_tag=HMPREF2844_00940;product=TonB-dependent receptor;protein_id=OFJ79320.1;transl_table=11 KV808166.1 Genbank gene 45078 45893 . + . ID=gene-HMPREF2844_00945;Name=HMPREF2844_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00945 KV808166.1 Protein Homology CDS 45078 45893 . + 0 ID=cds-OFJ79321.1;Parent=gene-HMPREF2844_00945;Dbxref=NCBI_GP:OFJ79321.1;Name=OFJ79321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271119.1;locus_tag=HMPREF2844_00945;product=esterase;protein_id=OFJ79321.1;transl_table=11 KV808166.1 Genbank gene 46854 48632 . - . ID=gene-HMPREF2844_00950;Name=HMPREF2844_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00950 KV808166.1 Protein Homology CDS 46854 48632 . - 0 ID=cds-OFJ79284.1;Parent=gene-HMPREF2844_00950;Dbxref=NCBI_GP:OFJ79284.1;Name=OFJ79284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683780.1;locus_tag=HMPREF2844_00950;product=peptide ABC transporter substrate-binding protein;protein_id=OFJ79284.1;transl_table=11 KV808166.1 Genbank gene 48727 49959 . - . ID=gene-HMPREF2844_00955;Name=HMPREF2844_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00955 KV808166.1 Protein Homology CDS 48727 49959 . - 0 ID=cds-OFJ79285.1;Parent=gene-HMPREF2844_00955;Dbxref=NCBI_GP:OFJ79285.1;Name=OFJ79285.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779590.1;locus_tag=HMPREF2844_00955;product=hypothetical protein;protein_id=OFJ79285.1;transl_table=11 KV808166.1 Genbank gene 50094 50696 . + . ID=gene-HMPREF2844_00960;Name=HMPREF2844_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00960 KV808166.1 Protein Homology CDS 50094 50696 . + 0 ID=cds-OFJ79286.1;Parent=gene-HMPREF2844_00960;Dbxref=NCBI_GP:OFJ79286.1;Name=OFJ79286.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779592.1;locus_tag=HMPREF2844_00960;product=NAD(P)H-quinone oxidoreductase;protein_id=OFJ79286.1;transl_table=11 KV808166.1 Genbank gene 50810 51433 . - . ID=gene-HMPREF2844_00965;Name=HMPREF2844_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00965 KV808166.1 Protein Homology CDS 50810 51433 . - 0 ID=cds-OFJ79287.1;Parent=gene-HMPREF2844_00965;Dbxref=NCBI_GP:OFJ79287.1;Name=OFJ79287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687454.1;locus_tag=HMPREF2844_00965;product=acetyltransferase;protein_id=OFJ79287.1;transl_table=11 ##sequence-region KV808167.1 1 23977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808167.1 Genbank region 1 23977 . + . ID=KV808167.1:1..23977;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808167.1 Genbank gene 68 673 . - . ID=gene-HMPREF2844_00970;Name=HMPREF2844_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00970 KV808167.1 Protein Homology CDS 68 673 . - 0 ID=cds-OFJ78772.1;Parent=gene-HMPREF2844_00970;Dbxref=NCBI_GP:OFJ78772.1;Name=OFJ78772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312378.1;locus_tag=HMPREF2844_00970;product=hypothetical protein;protein_id=OFJ78772.1;transl_table=11 KV808167.1 Genbank gene 779 1591 . - . ID=gene-HMPREF2844_00975;Name=HMPREF2844_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00975 KV808167.1 Protein Homology CDS 779 1591 . - 0 ID=cds-OFJ78773.1;Parent=gene-HMPREF2844_00975;Dbxref=NCBI_GP:OFJ78773.1;Name=OFJ78773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776972.1;locus_tag=HMPREF2844_00975;product=hypothetical protein;protein_id=OFJ78773.1;transl_table=11 KV808167.1 Genbank gene 1694 1945 . + . ID=gene-HMPREF2844_00980;Name=HMPREF2844_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00980 KV808167.1 Protein Homology CDS 1694 1945 . + 0 ID=cds-OFJ78774.1;Parent=gene-HMPREF2844_00980;Dbxref=NCBI_GP:OFJ78774.1;Name=OFJ78774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685102.1;locus_tag=HMPREF2844_00980;product=hypothetical protein;protein_id=OFJ78774.1;transl_table=11 KV808167.1 Genbank gene 2019 2849 . + . ID=gene-HMPREF2844_00985;Name=HMPREF2844_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00985 KV808167.1 Protein Homology CDS 2019 2849 . + 0 ID=cds-OFJ78775.1;Parent=gene-HMPREF2844_00985;Dbxref=NCBI_GP:OFJ78775.1;Name=OFJ78775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768540.1;locus_tag=HMPREF2844_00985;product=ABC transporter substrate-binding protein;protein_id=OFJ78775.1;transl_table=11 KV808167.1 Genbank gene 3025 3627 . + . ID=gene-HMPREF2844_00990;Name=HMPREF2844_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_00990 KV808167.1 Protein Homology CDS 3025 3627 . + 0 ID=cds-OFJ78776.1;Parent=gene-HMPREF2844_00990;Dbxref=NCBI_GP:OFJ78776.1;Name=OFJ78776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269914.1;locus_tag=HMPREF2844_00990;product=molybdenum ABC transporter ATP-binding protein;protein_id=OFJ78776.1;transl_table=11 KV808167.1 Genbank gene 3992 5551 . + . ID=gene-HMPREF2844_00995;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=HMPREF2844_00995 KV808167.1 Protein Homology CDS 3992 5551 . + 0 ID=cds-OFJ78777.1;Parent=gene-HMPREF2844_00995;Dbxref=NCBI_GP:OFJ78777.1;Name=OFJ78777.1;Note=with NarGJI catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high;gbkey=CDS;gene=narH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342921.1;locus_tag=HMPREF2844_00995;product=nitrate reductase subunit beta;protein_id=OFJ78777.1;transl_table=11 KV808167.1 Genbank gene 5551 6219 . + . ID=gene-HMPREF2844_01000;Name=HMPREF2844_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01000 KV808167.1 Protein Homology CDS 5551 6219 . + 0 ID=cds-OFJ78778.1;Parent=gene-HMPREF2844_01000;Dbxref=NCBI_GP:OFJ78778.1;Name=OFJ78778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269912.1;locus_tag=HMPREF2844_01000;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=OFJ78778.1;transl_table=11 KV808167.1 Genbank gene 6216 6905 . + . ID=gene-HMPREF2844_01005;Name=HMPREF2844_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01005 KV808167.1 Protein Homology CDS 6216 6905 . + 0 ID=cds-OFJ78779.1;Parent=gene-HMPREF2844_01005;Dbxref=NCBI_GP:OFJ78779.1;Name=OFJ78779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269911.1;locus_tag=HMPREF2844_01005;product=nitrate reductase;protein_id=OFJ78779.1;transl_table=11 KV808167.1 Genbank gene 7216 7878 . + . ID=gene-HMPREF2844_01010;Name=HMPREF2844_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01010 KV808167.1 Protein Homology CDS 7216 7878 . + 0 ID=cds-OFJ78780.1;Parent=gene-HMPREF2844_01010;Dbxref=NCBI_GP:OFJ78780.1;Name=OFJ78780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744824.1;locus_tag=HMPREF2844_01010;product=DNA-binding response regulator;protein_id=OFJ78780.1;transl_table=11 KV808167.1 Genbank gene 7924 8352 . + . ID=gene-HMPREF2844_01015;Name=HMPREF2844_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01015 KV808167.1 Protein Homology CDS 7924 8352 . + 0 ID=cds-OFJ78781.1;Parent=gene-HMPREF2844_01015;Dbxref=NCBI_GP:OFJ78781.1;Name=OFJ78781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269909.1;locus_tag=HMPREF2844_01015;product=molybdenum transport protein ModE;protein_id=OFJ78781.1;transl_table=11 KV808167.1 Genbank gene 8633 9892 . + . ID=gene-HMPREF2844_01020;Name=HMPREF2844_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01020 KV808167.1 Protein Homology CDS 8633 9892 . + 0 ID=cds-OFJ78782.1;Parent=gene-HMPREF2844_01020;Dbxref=NCBI_GP:OFJ78782.1;Name=OFJ78782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269908.1;locus_tag=HMPREF2844_01020;product=MFS transporter;protein_id=OFJ78782.1;transl_table=11 KV808167.1 Genbank gene 9953 11335 . + . ID=gene-HMPREF2844_01025;Name=HMPREF2844_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01025 KV808167.1 Protein Homology CDS 9953 11335 . + 0 ID=cds-OFJ78783.1;Parent=gene-HMPREF2844_01025;Dbxref=NCBI_GP:OFJ78783.1;Name=OFJ78783.1;Note=involved in the transport of nitrate and nitrite;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641472.1;locus_tag=HMPREF2844_01025;product=nitrate/nitrite transporter NarK;protein_id=OFJ78783.1;transl_table=11 KV808167.1 Genbank gene 11575 12801 . + . ID=gene-HMPREF2844_01030;Name=HMPREF2844_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01030 KV808167.1 Protein Homology CDS 11575 12801 . + 0 ID=cds-OFJ78784.1;Parent=gene-HMPREF2844_01030;Dbxref=NCBI_GP:OFJ78784.1;Name=OFJ78784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751868.1;locus_tag=HMPREF2844_01030;product=molybdopterin molybdenumtransferase MoeA;protein_id=OFJ78784.1;transl_table=11 KV808167.1 Genbank gene 12798 13775 . + . ID=gene-HMPREF2844_01035;Name=HMPREF2844_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01035 KV808167.1 Protein Homology CDS 12798 13775 . + 0 ID=cds-OFJ78785.1;Parent=gene-HMPREF2844_01035;Dbxref=NCBI_GP:OFJ78785.1;Name=OFJ78785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269906.1;locus_tag=HMPREF2844_01035;product=cyclic pyranopterin phosphate synthase MoaA;protein_id=OFJ78785.1;transl_table=11 KV808167.1 Genbank gene 13843 14409 . + . ID=gene-HMPREF2844_01040;Name=HMPREF2844_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01040 KV808167.1 Protein Homology CDS 13843 14409 . + 0 ID=cds-OFJ78786.1;Parent=gene-HMPREF2844_01040;Dbxref=NCBI_GP:OFJ78786.1;Name=OFJ78786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269905.1;locus_tag=HMPREF2844_01040;product=molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=OFJ78786.1;transl_table=11 KV808167.1 Genbank gene 14456 14929 . + . ID=gene-HMPREF2844_01045;Name=HMPREF2844_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01045 KV808167.1 Protein Homology CDS 14456 14929 . + 0 ID=cds-OFJ78787.1;Parent=gene-HMPREF2844_01045;Dbxref=NCBI_GP:OFJ78787.1;Name=OFJ78787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269904.1;locus_tag=HMPREF2844_01045;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=OFJ78787.1;transl_table=11 KV808167.1 Genbank gene 14934 15173 . + . ID=gene-HMPREF2844_01050;Name=HMPREF2844_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01050 KV808167.1 Protein Homology CDS 14934 15173 . + 0 ID=cds-OFJ78788.1;Parent=gene-HMPREF2844_01050;Dbxref=NCBI_GP:OFJ78788.1;Name=OFJ78788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744816.1;locus_tag=HMPREF2844_01050;product=molybdopterin synthase sulfur carrier subunit;protein_id=OFJ78788.1;transl_table=11 KV808167.1 Genbank gene 15175 15612 . + . ID=gene-HMPREF2844_01055;Name=HMPREF2844_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01055 KV808167.1 Protein Homology CDS 15175 15612 . + 0 ID=cds-OFJ78789.1;Parent=gene-HMPREF2844_01055;Dbxref=NCBI_GP:OFJ78789.1;Name=OFJ78789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744815.1;locus_tag=HMPREF2844_01055;product=molybdopterin-converting factor chain 2;protein_id=OFJ78789.1;transl_table=11 KV808167.1 Genbank gene 15835 16587 . + . ID=gene-HMPREF2844_01060;Name=HMPREF2844_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01060 KV808167.1 Protein Homology CDS 15835 16587 . + 0 ID=cds-OFJ78790.1;Parent=gene-HMPREF2844_01060;Dbxref=NCBI_GP:OFJ78790.1;Name=OFJ78790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269901.1;locus_tag=HMPREF2844_01060;product=molybdate ABC transporter substrate-binding protein;protein_id=OFJ78790.1;transl_table=11 KV808167.1 Genbank gene 16612 17283 . + . ID=gene-HMPREF2844_01065;Name=HMPREF2844_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01065 KV808167.1 Protein Homology CDS 16612 17283 . + 0 ID=cds-OFJ78791.1;Parent=gene-HMPREF2844_01065;Dbxref=NCBI_GP:OFJ78791.1;Name=OFJ78791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744813.1;locus_tag=HMPREF2844_01065;product=molybdenum ABC transporter permease subunit;protein_id=OFJ78791.1;transl_table=11 KV808167.1 Genbank gene 17280 17960 . + . ID=gene-HMPREF2844_01070;Name=HMPREF2844_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01070 KV808167.1 Protein Homology CDS 17280 17960 . + 0 ID=cds-OFJ78792.1;Parent=gene-HMPREF2844_01070;Dbxref=NCBI_GP:OFJ78792.1;Name=OFJ78792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744812.1;locus_tag=HMPREF2844_01070;product=Fe3+/spermidine/putrescine ABC transporter ATP-binding protein;protein_id=OFJ78792.1;transl_table=11 KV808167.1 Genbank gene 18280 21960 . + . ID=gene-HMPREF2844_01075;Name=narZ;gbkey=Gene;gene=narZ;gene_biotype=protein_coding;locus_tag=HMPREF2844_01075 KV808167.1 Protein Homology CDS 18280 21960 . + 0 ID=cds-OFJ78793.1;Parent=gene-HMPREF2844_01075;Dbxref=NCBI_GP:OFJ78793.1;Name=OFJ78793.1;Note=with NarYV catalyzes the reduction of nitrate%3B the beta subunit is an iron sulfur cluster containing electron transfer subunit%3B one of 3 nitrate reductases in E. coli%3B expression of nitrate reductase Z is not dependent on nitrate levels;gbkey=CDS;gene=narZ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823938.1;locus_tag=HMPREF2844_01075;product=nitrate reductase subunit alpha;protein_id=OFJ78793.1;transl_table=11 KV808167.1 Genbank gene 22323 22895 . + . ID=gene-HMPREF2844_01080;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=HMPREF2844_01080 KV808167.1 Protein Homology CDS 22323 22895 . + 0 ID=cds-OFJ78794.1;Parent=gene-HMPREF2844_01080;Dbxref=NCBI_GP:OFJ78794.1;Name=OFJ78794.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744807.1;locus_tag=HMPREF2844_01080;product=molybdopterin adenylyltransferase;protein_id=OFJ78794.1;transl_table=11 ##sequence-region KV808168.1 1 2652 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808168.1 Genbank region 1 2652 . + . ID=KV808168.1:1..2652;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808168.1 Genbank gene 359 1774 . + . ID=gene-HMPREF2844_01085;Name=HMPREF2844_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01085 KV808168.1 Protein Homology CDS 359 1774 . + 0 ID=cds-OFJ78658.1;Parent=gene-HMPREF2844_01085;Dbxref=NCBI_GP:OFJ78658.1;Name=OFJ78658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269823.1;locus_tag=HMPREF2844_01085;product=N-acetylglucosaminylphosphatidylinositol deacetylase;protein_id=OFJ78658.1;transl_table=11 KV808168.1 Genbank gene 1866 2570 . + . ID=gene-HMPREF2844_01090;Name=HMPREF2844_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01090 KV808168.1 Protein Homology CDS 1866 2570 . + 0 ID=cds-OFJ78659.1;Parent=gene-HMPREF2844_01090;Dbxref=NCBI_GP:OFJ78659.1;Name=OFJ78659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688191.1;locus_tag=HMPREF2844_01090;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=OFJ78659.1;transl_table=11 ##sequence-region KV808169.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808169.1 Genbank region 1 232 . + . ID=KV808169.1:1..232;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808169.1 Genbank pseudogene 1 232 . + . ID=gene-HMPREF2844_01095;Name=HMPREF2844_01095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01095;pseudo=true KV808169.1 GeneMarkS+ CDS 1 232 . + 2 ID=cds-HMPREF2844_01095;Parent=gene-HMPREF2844_01095;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01095;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808170.1 1 20092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808170.1 Genbank region 1 20092 . + . ID=KV808170.1:1..20092;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808170.1 Genbank pseudogene 530 1447 . - . ID=gene-HMPREF2844_01100;Name=HMPREF2844_01100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01100;pseudo=true KV808170.1 Protein Homology CDS 530 1447 . - 0 ID=cds-HMPREF2844_01100;Parent=gene-HMPREF2844_01100;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008953114.1;locus_tag=HMPREF2844_01100;product=cytochrome oxidase subunit III;pseudo=true;transl_table=11 KV808170.1 Genbank gene 1478 1645 . - . ID=gene-HMPREF2844_01105;Name=HMPREF2844_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01105 KV808170.1 Protein Homology CDS 1478 1645 . - 0 ID=cds-OFJ78018.1;Parent=gene-HMPREF2844_01105;Dbxref=NCBI_GP:OFJ78018.1;Name=OFJ78018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270010.1;locus_tag=HMPREF2844_01105;product=cytochrome C oxidase subunit IV;protein_id=OFJ78018.1;transl_table=11 KV808170.1 Genbank gene 1650 2261 . - . ID=gene-HMPREF2844_01110;Name=HMPREF2844_01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01110 KV808170.1 Protein Homology CDS 1650 2261 . - 0 ID=cds-OFJ78019.1;Parent=gene-HMPREF2844_01110;Dbxref=NCBI_GP:OFJ78019.1;Name=OFJ78019.1;Note=CcoO%3B FixO;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242940.1;locus_tag=HMPREF2844_01110;product=cytochrome C oxidase Cbb3;protein_id=OFJ78019.1;transl_table=11 KV808170.1 Genbank gene 2285 3730 . - . ID=gene-HMPREF2844_01115;Name=HMPREF2844_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01115 KV808170.1 Protein Homology CDS 2285 3730 . - 0 ID=cds-OFJ78020.1;Parent=gene-HMPREF2844_01115;Dbxref=NCBI_GP:OFJ78020.1;Name=OFJ78020.1;Note=CcoN%3B FixN;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425113.1;locus_tag=HMPREF2844_01115;product=cytochrome C oxidase Cbb3;protein_id=OFJ78020.1;transl_table=11 KV808170.1 Genbank gene 4048 5811 . + . ID=gene-HMPREF2844_01120;Name=HMPREF2844_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01120 KV808170.1 Protein Homology CDS 4048 5811 . + 0 ID=cds-OFJ78021.1;Parent=gene-HMPREF2844_01120;Dbxref=NCBI_GP:OFJ78021.1;Name=OFJ78021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741680.1;locus_tag=HMPREF2844_01120;product=peptidase;protein_id=OFJ78021.1;transl_table=11 KV808170.1 Genbank gene 5877 6317 . + . ID=gene-HMPREF2844_01125;Name=HMPREF2844_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01125 KV808170.1 Protein Homology CDS 5877 6317 . + 0 ID=cds-OFJ78022.1;Parent=gene-HMPREF2844_01125;Dbxref=NCBI_GP:OFJ78022.1;Name=OFJ78022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748784.1;locus_tag=HMPREF2844_01125;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=OFJ78022.1;transl_table=11 KV808170.1 Genbank gene 6460 7314 . - . ID=gene-HMPREF2844_01130;Name=HMPREF2844_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01130 KV808170.1 Protein Homology CDS 6460 7314 . - 0 ID=cds-OFJ78023.1;Parent=gene-HMPREF2844_01130;Dbxref=NCBI_GP:OFJ78023.1;Name=OFJ78023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684116.1;locus_tag=HMPREF2844_01130;product=acyltransferase;protein_id=OFJ78023.1;transl_table=11 KV808170.1 Genbank gene 7790 9703 . - . ID=gene-HMPREF2844_01135;Name=HMPREF2844_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01135 KV808170.1 Protein Homology CDS 7790 9703 . - 0 ID=cds-OFJ77980.1;Parent=gene-HMPREF2844_01135;Dbxref=NCBI_GP:OFJ77980.1;Name=OFJ77980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776888.1;locus_tag=HMPREF2844_01135;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=OFJ77980.1;transl_table=11 KV808170.1 Genbank gene 9866 10738 . - . ID=gene-HMPREF2844_01140;Name=HMPREF2844_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01140 KV808170.1 Protein Homology CDS 9866 10738 . - 0 ID=cds-OFJ77981.1;Parent=gene-HMPREF2844_01140;Dbxref=NCBI_GP:OFJ77981.1;Name=OFJ77981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741690.1;locus_tag=HMPREF2844_01140;product=oxidoreductase;protein_id=OFJ77981.1;transl_table=11 KV808170.1 Genbank gene 10949 12034 . + . ID=gene-HMPREF2844_01145;Name=HMPREF2844_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01145 KV808170.1 Protein Homology CDS 10949 12034 . + 0 ID=cds-OFJ77982.1;Parent=gene-HMPREF2844_01145;Dbxref=NCBI_GP:OFJ77982.1;Name=OFJ77982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688141.1;locus_tag=HMPREF2844_01145;product=putative lipopolysaccharide heptosyltransferase III;protein_id=OFJ77982.1;transl_table=11 KV808170.1 Genbank gene 12110 12445 . - . ID=gene-HMPREF2844_01150;Name=HMPREF2844_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01150 KV808170.1 Protein Homology CDS 12110 12445 . - 0 ID=cds-OFJ77990.1;Parent=gene-HMPREF2844_01150;Dbxref=NCBI_GP:OFJ77990.1;Name=OFJ77990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271384.1;locus_tag=HMPREF2844_01150;product=hypothetical protein;protein_id=OFJ77990.1;transl_table=11 KV808170.1 Genbank gene 12638 13186 . + . ID=gene-HMPREF2844_01155;Name=HMPREF2844_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01155 KV808170.1 Protein Homology CDS 12638 13186 . + 0 ID=cds-OFJ77983.1;Parent=gene-HMPREF2844_01155;Dbxref=NCBI_GP:OFJ77983.1;Name=OFJ77983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741427.1;locus_tag=HMPREF2844_01155;product=crossover junction endodeoxyribonuclease RuvC;protein_id=OFJ77983.1;transl_table=11 KV808170.1 Genbank gene 13316 14185 . + . ID=gene-HMPREF2844_01160;Name=HMPREF2844_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01160 KV808170.1 Protein Homology CDS 13316 14185 . + 0 ID=cds-OFJ77984.1;Parent=gene-HMPREF2844_01160;Dbxref=NCBI_GP:OFJ77984.1;Name=OFJ77984.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282591.1;locus_tag=HMPREF2844_01160;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=OFJ77984.1;transl_table=11 KV808170.1 Genbank gene 15038 15718 . - . ID=gene-HMPREF2844_01165;Name=HMPREF2844_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01165 KV808170.1 Protein Homology CDS 15038 15718 . - 0 ID=cds-OFJ77985.1;Parent=gene-HMPREF2844_01165;Dbxref=NCBI_GP:OFJ77985.1;Name=OFJ77985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520099.1;locus_tag=HMPREF2844_01165;product=hypothetical protein;protein_id=OFJ77985.1;transl_table=11 KV808170.1 Genbank gene 15978 16856 . - . ID=gene-HMPREF2844_01170;Name=HMPREF2844_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01170 KV808170.1 Protein Homology CDS 15978 16856 . - 0 ID=cds-OFJ77986.1;Parent=gene-HMPREF2844_01170;Dbxref=NCBI_GP:OFJ77986.1;Name=OFJ77986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749744.1;locus_tag=HMPREF2844_01170;product=hypothetical protein;protein_id=OFJ77986.1;transl_table=11 KV808170.1 Genbank gene 17117 18115 . - . ID=gene-HMPREF2844_01175;Name=HMPREF2844_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01175 KV808170.1 Protein Homology CDS 17117 18115 . - 0 ID=cds-OFJ77987.1;Parent=gene-HMPREF2844_01175;Dbxref=NCBI_GP:OFJ77987.1;Name=OFJ77987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687603.1;locus_tag=HMPREF2844_01175;product=branched chain amino acid aminotransferase;protein_id=OFJ77987.1;transl_table=11 KV808170.1 Genbank gene 18504 18848 . + . ID=gene-HMPREF2844_01180;Name=HMPREF2844_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01180 KV808170.1 Protein Homology CDS 18504 18848 . + 0 ID=cds-OFJ77988.1;Parent=gene-HMPREF2844_01180;Dbxref=NCBI_GP:OFJ77988.1;Name=OFJ77988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311116.1;locus_tag=HMPREF2844_01180;product=hypothetical protein;protein_id=OFJ77988.1;transl_table=11 KV808170.1 Genbank gene 18861 20030 . + . ID=gene-HMPREF2844_01185;Name=HMPREF2844_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01185 KV808170.1 Protein Homology CDS 18861 20030 . + 0 ID=cds-OFJ77989.1;Parent=gene-HMPREF2844_01185;Dbxref=NCBI_GP:OFJ77989.1;Name=OFJ77989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235442.1;locus_tag=HMPREF2844_01185;product=hypothetical protein;protein_id=OFJ77989.1;transl_table=11 ##sequence-region KV808171.1 1 3049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808171.1 Genbank region 1 3049 . + . ID=KV808171.1:1..3049;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808171.1 Genbank gene 57 1631 . - . ID=gene-HMPREF2844_01190;Name=HMPREF2844_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01190 KV808171.1 Protein Homology CDS 57 1631 . - 0 ID=cds-OFJ77002.1;Parent=gene-HMPREF2844_01190;Dbxref=NCBI_GP:OFJ77002.1;Name=OFJ77002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748724.1;locus_tag=HMPREF2844_01190;product=phosphate permease;protein_id=OFJ77002.1;transl_table=11 KV808171.1 Genbank gene 1804 2904 . + . ID=gene-HMPREF2844_01195;Name=HMPREF2844_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01195 KV808171.1 Protein Homology CDS 1804 2904 . + 0 ID=cds-OFJ77003.1;Parent=gene-HMPREF2844_01195;Dbxref=NCBI_GP:OFJ77003.1;Name=OFJ77003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270008.1;locus_tag=HMPREF2844_01195;product=anhydro-N-acetylmuramic acid kinase;protein_id=OFJ77003.1;transl_table=11 ##sequence-region KV808172.1 1 14335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808172.1 Genbank region 1 14335 . + . ID=KV808172.1:1..14335;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808172.1 Genbank gene 533 994 . + . ID=gene-HMPREF2844_01200;Name=HMPREF2844_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01200 KV808172.1 Protein Homology CDS 533 994 . + 0 ID=cds-OFJ76953.1;Parent=gene-HMPREF2844_01200;Dbxref=NCBI_GP:OFJ76953.1;Name=OFJ76953.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283836.1;locus_tag=HMPREF2844_01200;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=OFJ76953.1;transl_table=11 KV808172.1 Genbank gene 1065 1256 . + . ID=gene-HMPREF2844_01205;Name=HMPREF2844_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01205 KV808172.1 Protein Homology CDS 1065 1256 . + 0 ID=cds-OFJ76954.1;Parent=gene-HMPREF2844_01205;Dbxref=NCBI_GP:OFJ76954.1;Name=OFJ76954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688245.1;locus_tag=HMPREF2844_01205;product=hypothetical protein;protein_id=OFJ76954.1;transl_table=11 KV808172.1 Genbank gene 1292 2653 . + . ID=gene-HMPREF2844_01210;Name=HMPREF2844_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01210 KV808172.1 Protein Homology CDS 1292 2653 . + 0 ID=cds-OFJ76955.1;Parent=gene-HMPREF2844_01210;Dbxref=NCBI_GP:OFJ76955.1;Name=OFJ76955.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687264.1;locus_tag=HMPREF2844_01210;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=OFJ76955.1;transl_table=11 KV808172.1 Genbank gene 3167 4054 . + . ID=gene-HMPREF2844_01215;Name=HMPREF2844_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01215 KV808172.1 Protein Homology CDS 3167 4054 . + 0 ID=cds-OFJ76956.1;Parent=gene-HMPREF2844_01215;Dbxref=NCBI_GP:OFJ76956.1;Name=OFJ76956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684134.1;locus_tag=HMPREF2844_01215;product=ribosomal protein L11 methyltransferase;protein_id=OFJ76956.1;transl_table=11 KV808172.1 Genbank gene 4178 4801 . - . ID=gene-HMPREF2844_01220;Name=HMPREF2844_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01220 KV808172.1 Protein Homology CDS 4178 4801 . - 0 ID=cds-OFJ76957.1;Parent=gene-HMPREF2844_01220;Dbxref=NCBI_GP:OFJ76957.1;Name=OFJ76957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688242.1;locus_tag=HMPREF2844_01220;product=DNA-binding protein;protein_id=OFJ76957.1;transl_table=11 KV808172.1 Genbank gene 5318 5743 . - . ID=gene-HMPREF2844_01225;Name=HMPREF2844_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01225 KV808172.1 Protein Homology CDS 5318 5743 . - 0 ID=cds-OFJ76958.1;Parent=gene-HMPREF2844_01225;Dbxref=NCBI_GP:OFJ76958.1;Name=OFJ76958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741652.1;locus_tag=HMPREF2844_01225;product=F0F1 ATP synthase subunit epsilon;protein_id=OFJ76958.1;transl_table=11 KV808172.1 Genbank gene 5754 7151 . - . ID=gene-HMPREF2844_01230;Name=HMPREF2844_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01230 KV808172.1 Protein Homology CDS 5754 7151 . - 0 ID=cds-OFJ76959.1;Parent=gene-HMPREF2844_01230;Dbxref=NCBI_GP:OFJ76959.1;Name=OFJ76959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688123.1;locus_tag=HMPREF2844_01230;product=ATP synthase subunit beta;protein_id=OFJ76959.1;transl_table=11 KV808172.1 Genbank gene 7190 8065 . - . ID=gene-HMPREF2844_01235;Name=HMPREF2844_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01235 KV808172.1 Protein Homology CDS 7190 8065 . - 0 ID=cds-OFJ76960.1;Parent=gene-HMPREF2844_01235;Dbxref=NCBI_GP:OFJ76960.1;Name=OFJ76960.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003770227.1;locus_tag=HMPREF2844_01235;product=F0F1 ATP synthase subunit gamma;protein_id=OFJ76960.1;transl_table=11 KV808172.1 Genbank gene 8090 9637 . - . ID=gene-HMPREF2844_01240;Name=HMPREF2844_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01240 KV808172.1 Protein Homology CDS 8090 9637 . - 0 ID=cds-OFJ76961.1;Parent=gene-HMPREF2844_01240;Dbxref=NCBI_GP:OFJ76961.1;Name=OFJ76961.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449548.1;locus_tag=HMPREF2844_01240;product=ATP synthase subunit alpha;protein_id=OFJ76961.1;transl_table=11 KV808172.1 Genbank gene 9648 10181 . - . ID=gene-HMPREF2844_01245;Name=HMPREF2844_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01245 KV808172.1 Protein Homology CDS 9648 10181 . - 0 ID=cds-OFJ76962.1;Parent=gene-HMPREF2844_01245;Dbxref=NCBI_GP:OFJ76962.1;Name=OFJ76962.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712708.1;locus_tag=HMPREF2844_01245;product=ATP synthase F0F1 subunit delta;protein_id=OFJ76962.1;transl_table=11 KV808172.1 Genbank gene 10186 10656 . - . ID=gene-HMPREF2844_01250;Name=HMPREF2844_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01250 KV808172.1 Protein Homology CDS 10186 10656 . - 0 ID=cds-OFJ76963.1;Parent=gene-HMPREF2844_01250;Dbxref=NCBI_GP:OFJ76963.1;Name=OFJ76963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688126.1;locus_tag=HMPREF2844_01250;product=F0F1 ATP synthase subunit B;protein_id=OFJ76963.1;transl_table=11 KV808172.1 Genbank gene 10728 10964 . - . ID=gene-HMPREF2844_01255;Name=HMPREF2844_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01255 KV808172.1 Protein Homology CDS 10728 10964 . - 0 ID=cds-OFJ76964.1;Parent=gene-HMPREF2844_01255;Dbxref=NCBI_GP:OFJ76964.1;Name=OFJ76964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214801.1;locus_tag=HMPREF2844_01255;product=ATP synthase F0F1 subunit C;protein_id=OFJ76964.1;transl_table=11 KV808172.1 Genbank gene 11026 11892 . - . ID=gene-HMPREF2844_01260;Name=HMPREF2844_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01260 KV808172.1 Protein Homology CDS 11026 11892 . - 0 ID=cds-OFJ76965.1;Parent=gene-HMPREF2844_01260;Dbxref=NCBI_GP:OFJ76965.1;Name=OFJ76965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464456.1;locus_tag=HMPREF2844_01260;product=F0F1 ATP synthase subunit A;protein_id=OFJ76965.1;transl_table=11 KV808172.1 Genbank gene 12501 13358 . - . ID=gene-HMPREF2844_01265;Name=HMPREF2844_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01265 KV808172.1 Protein Homology CDS 12501 13358 . - 0 ID=cds-OFJ76966.1;Parent=gene-HMPREF2844_01265;Dbxref=NCBI_GP:OFJ76966.1;Name=OFJ76966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688128.1;locus_tag=HMPREF2844_01265;product=chromosome partitioning protein ParB;protein_id=OFJ76966.1;transl_table=11 KV808172.1 Genbank gene 13513 14082 . + . ID=gene-HMPREF2844_01270;Name=HMPREF2844_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01270 KV808172.1 Protein Homology CDS 13513 14082 . + 0 ID=cds-OFJ76967.1;Parent=gene-HMPREF2844_01270;Dbxref=NCBI_GP:OFJ76967.1;Name=OFJ76967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271111.1;locus_tag=HMPREF2844_01270;product=hypothetical protein;protein_id=OFJ76967.1;transl_table=11 ##sequence-region KV808173.1 1 4267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808173.1 Genbank region 1 4267 . + . ID=KV808173.1:1..4267;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808173.1 Genbank gene 221 1993 . + . ID=gene-HMPREF2844_01275;Name=HMPREF2844_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01275 KV808173.1 Protein Homology CDS 221 1993 . + 0 ID=cds-OFJ76904.1;Parent=gene-HMPREF2844_01275;Dbxref=NCBI_GP:OFJ76904.1;Name=OFJ76904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226201.1;locus_tag=HMPREF2844_01275;product=DNA primase;protein_id=OFJ76904.1;transl_table=11 KV808173.1 Genbank gene 2214 4163 . + . ID=gene-HMPREF2844_01280;Name=HMPREF2844_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01280 KV808173.1 Protein Homology CDS 2214 4163 . + 0 ID=cds-OFJ76905.1;Parent=gene-HMPREF2844_01280;Dbxref=NCBI_GP:OFJ76905.1;Name=OFJ76905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241797.1;locus_tag=HMPREF2844_01280;product=RNA polymerase sigma factor RpoD;protein_id=OFJ76905.1;transl_table=11 ##sequence-region KV808174.1 1 1800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808174.1 Genbank region 1 1800 . + . ID=KV808174.1:1..1800;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808174.1 Genbank gene 423 1085 . - . ID=gene-HMPREF2844_01285;Name=HMPREF2844_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01285 KV808174.1 GeneMarkS+ CDS 423 1085 . - 0 ID=cds-OFJ75868.1;Parent=gene-HMPREF2844_01285;Dbxref=NCBI_GP:OFJ75868.1;Name=OFJ75868.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01285;product=hypothetical protein;protein_id=OFJ75868.1;transl_table=11 KV808174.1 Genbank pseudogene 1484 1800 . - . ID=gene-HMPREF2844_01290;Name=HMPREF2844_01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01290;pseudo=true KV808174.1 Protein Homology CDS 1484 1800 . - 2 ID=cds-HMPREF2844_01290;Parent=gene-HMPREF2844_01290;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743435.1;locus_tag=HMPREF2844_01290;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 ##sequence-region KV808175.1 1 40848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808175.1 Genbank region 1 40848 . + . ID=KV808175.1:1..40848;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808175.1 Genbank gene 61 921 . - . ID=gene-HMPREF2844_01295;Name=HMPREF2844_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01295 KV808175.1 Protein Homology CDS 61 921 . - 0 ID=cds-OFJ75681.1;Parent=gene-HMPREF2844_01295;Dbxref=NCBI_GP:OFJ75681.1;Name=OFJ75681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687730.1;locus_tag=HMPREF2844_01295;product=ABC transporter permease;protein_id=OFJ75681.1;transl_table=11 KV808175.1 Genbank gene 1193 1885 . - . ID=gene-HMPREF2844_01300;Name=HMPREF2844_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01300 KV808175.1 Protein Homology CDS 1193 1885 . - 0 ID=cds-OFJ75682.1;Parent=gene-HMPREF2844_01300;Dbxref=NCBI_GP:OFJ75682.1;Name=OFJ75682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173263.1;locus_tag=HMPREF2844_01300;product=racemase;protein_id=OFJ75682.1;transl_table=11 KV808175.1 Genbank gene 2049 2573 . - . ID=gene-HMPREF2844_01305;Name=HMPREF2844_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01305 KV808175.1 Protein Homology CDS 2049 2573 . - 0 ID=cds-OFJ75683.1;Parent=gene-HMPREF2844_01305;Dbxref=NCBI_GP:OFJ75683.1;Name=OFJ75683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312026.1;locus_tag=HMPREF2844_01305;product=GCN5 family acetyltransferase;protein_id=OFJ75683.1;transl_table=11 KV808175.1 Genbank pseudogene 2611 2820 . - . ID=gene-HMPREF2844_01310;Name=HMPREF2844_01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01310;pseudo=true KV808175.1 Protein Homology CDS 2611 2820 . - 0 ID=cds-HMPREF2844_01310;Parent=gene-HMPREF2844_01310;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312027.1;locus_tag=HMPREF2844_01310;product=MmcQ protein;pseudo=true;transl_table=11 KV808175.1 Genbank gene 3007 3549 . - . ID=gene-HMPREF2844_01315;Name=HMPREF2844_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01315 KV808175.1 Protein Homology CDS 3007 3549 . - 0 ID=cds-OFJ75684.1;Parent=gene-HMPREF2844_01315;Dbxref=NCBI_GP:OFJ75684.1;Name=OFJ75684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687731.1;locus_tag=HMPREF2844_01315;product=hypothetical protein;protein_id=OFJ75684.1;transl_table=11 KV808175.1 Genbank pseudogene 3922 5445 . - . ID=gene-HMPREF2844_01320;Name=HMPREF2844_01320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01320;pseudo=true KV808175.1 Protein Homology CDS 3922 5445 . - 0 ID=cds-HMPREF2844_01320;Parent=gene-HMPREF2844_01320;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779338.1;locus_tag=HMPREF2844_01320;product=hypothetical protein;pseudo=true;transl_table=11 KV808175.1 Genbank pseudogene 5546 7280 . - . ID=gene-HMPREF2844_01325;Name=HMPREF2844_01325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01325;pseudo=true KV808175.1 Protein Homology CDS 5546 7280 . - 0 ID=cds-HMPREF2844_01325;Parent=gene-HMPREF2844_01325;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779338.1;locus_tag=HMPREF2844_01325;product=ABC transporter;pseudo=true;transl_table=11 KV808175.1 Genbank gene 7574 8971 . - . ID=gene-HMPREF2844_01330;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=HMPREF2844_01330 KV808175.1 Protein Homology CDS 7574 8971 . - 0 ID=cds-OFJ75573.1;Parent=gene-HMPREF2844_01330;Dbxref=NCBI_GP:OFJ75573.1;Name=OFJ75573.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311384.1;locus_tag=HMPREF2844_01330;product=aspartate ammonia-lyase;protein_id=OFJ75573.1;transl_table=11 KV808175.1 Genbank gene 9151 10026 . - . ID=gene-HMPREF2844_01335;Name=HMPREF2844_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01335 KV808175.1 Protein Homology CDS 9151 10026 . - 0 ID=cds-OFJ75574.1;Parent=gene-HMPREF2844_01335;Dbxref=NCBI_GP:OFJ75574.1;Name=OFJ75574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003751426.1;locus_tag=HMPREF2844_01335;product=hypothetical protein;protein_id=OFJ75574.1;transl_table=11 KV808175.1 Genbank gene 10186 10797 . - . ID=gene-HMPREF2844_01340;Name=HMPREF2844_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01340 KV808175.1 Protein Homology CDS 10186 10797 . - 0 ID=cds-OFJ75575.1;Parent=gene-HMPREF2844_01340;Dbxref=NCBI_GP:OFJ75575.1;Name=OFJ75575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271344.1;locus_tag=HMPREF2844_01340;product=molecular chaperone DnaJ;protein_id=OFJ75575.1;transl_table=11 KV808175.1 Genbank gene 10972 11454 . - . ID=gene-HMPREF2844_01345;Name=HMPREF2844_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01345 KV808175.1 Protein Homology CDS 10972 11454 . - 0 ID=cds-OFJ75576.1;Parent=gene-HMPREF2844_01345;Dbxref=NCBI_GP:OFJ75576.1;Name=OFJ75576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687445.1;locus_tag=HMPREF2844_01345;product=aminoacyl-tRNA deacylase;protein_id=OFJ75576.1;transl_table=11 KV808175.1 Genbank gene 11692 12042 . + . ID=gene-HMPREF2844_01350;Name=HMPREF2844_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01350 KV808175.1 Protein Homology CDS 11692 12042 . + 0 ID=cds-OFJ75577.1;Parent=gene-HMPREF2844_01350;Dbxref=NCBI_GP:OFJ75577.1;Name=OFJ75577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273361.1;locus_tag=HMPREF2844_01350;product=hypothetical protein;protein_id=OFJ75577.1;transl_table=11 KV808175.1 Genbank gene 12211 13509 . - . ID=gene-HMPREF2844_01355;Name=HMPREF2844_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01355 KV808175.1 Protein Homology CDS 12211 13509 . - 0 ID=cds-OFJ75578.1;Parent=gene-HMPREF2844_01355;Dbxref=NCBI_GP:OFJ75578.1;Name=OFJ75578.1;Note=catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271936.1;locus_tag=HMPREF2844_01355;product=adenylosuccinate synthase;protein_id=OFJ75578.1;transl_table=11 KV808175.1 Genbank gene 13615 14766 . - . ID=gene-HMPREF2844_01360;Name=hisZ;gbkey=Gene;gene=hisZ;gene_biotype=protein_coding;locus_tag=HMPREF2844_01360 KV808175.1 Protein Homology CDS 13615 14766 . - 0 ID=cds-OFJ75579.1;Parent=gene-HMPREF2844_01360;Dbxref=NCBI_GP:OFJ75579.1;Name=OFJ75579.1;Note=May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine;gbkey=CDS;gene=hisZ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777572.1;locus_tag=HMPREF2844_01360;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=OFJ75579.1;transl_table=11 KV808175.1 Genbank gene 15020 15340 . - . ID=gene-HMPREF2844_01365;Name=HMPREF2844_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01365 KV808175.1 Protein Homology CDS 15020 15340 . - 0 ID=cds-OFJ75580.1;Parent=gene-HMPREF2844_01365;Dbxref=NCBI_GP:OFJ75580.1;Name=OFJ75580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742528.1;locus_tag=HMPREF2844_01365;product=hypothetical protein;protein_id=OFJ75580.1;transl_table=11 KV808175.1 Genbank gene 15428 16111 . - . ID=gene-HMPREF2844_01370;Name=HMPREF2844_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01370 KV808175.1 Protein Homology CDS 15428 16111 . - 0 ID=cds-OFJ75581.1;Parent=gene-HMPREF2844_01370;Dbxref=NCBI_GP:OFJ75581.1;Name=OFJ75581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271339.1;locus_tag=HMPREF2844_01370;product=ribulose-phosphate 3-epimerase;protein_id=OFJ75581.1;transl_table=11 KV808175.1 Genbank gene 16367 16795 . + . ID=gene-HMPREF2844_01375;Name=HMPREF2844_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01375 KV808175.1 Protein Homology CDS 16367 16795 . + 0 ID=cds-OFJ75582.1;Parent=gene-HMPREF2844_01375;Dbxref=NCBI_GP:OFJ75582.1;Name=OFJ75582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756797.1;locus_tag=HMPREF2844_01375;product=hypothetical protein;protein_id=OFJ75582.1;transl_table=11 KV808175.1 Genbank gene 16973 17839 . - . ID=gene-HMPREF2844_01380;Name=HMPREF2844_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01380 KV808175.1 Protein Homology CDS 16973 17839 . - 0 ID=cds-OFJ75583.1;Parent=gene-HMPREF2844_01380;Dbxref=NCBI_GP:OFJ75583.1;Name=OFJ75583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767909.1;locus_tag=HMPREF2844_01380;product=AAA family ATPase;protein_id=OFJ75583.1;transl_table=11 KV808175.1 Genbank gene 17848 18477 . - . ID=gene-HMPREF2844_01385;Name=HMPREF2844_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01385 KV808175.1 Protein Homology CDS 17848 18477 . - 0 ID=cds-OFJ75584.1;Parent=gene-HMPREF2844_01385;Dbxref=NCBI_GP:OFJ75584.1;Name=OFJ75584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756790.1;locus_tag=HMPREF2844_01385;product=riboflavin synthase subunit alpha;protein_id=OFJ75584.1;transl_table=11 KV808175.1 Genbank gene 18497 19204 . - . ID=gene-HMPREF2844_01390;Name=HMPREF2844_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01390 KV808175.1 Protein Homology CDS 18497 19204 . - 0 ID=cds-OFJ75585.1;Parent=gene-HMPREF2844_01390;Dbxref=NCBI_GP:OFJ75585.1;Name=OFJ75585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767951.1;locus_tag=HMPREF2844_01390;product=tRNA (guanine(46)-N(7))-methyltransferase;protein_id=OFJ75585.1;transl_table=11 KV808175.1 Genbank gene 19546 21333 . - . ID=gene-HMPREF2844_01395;Name=HMPREF2844_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01395 KV808175.1 Protein Homology CDS 19546 21333 . - 0 ID=cds-OFJ75586.1;Parent=gene-HMPREF2844_01395;Dbxref=NCBI_GP:OFJ75586.1;Name=OFJ75586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272436.1;locus_tag=HMPREF2844_01395;product=dihydrolipoamide dehydrogenase;protein_id=OFJ75586.1;transl_table=11 KV808175.1 Genbank gene 21421 23040 . - . ID=gene-HMPREF2844_01400;Name=HMPREF2844_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01400 KV808175.1 Protein Homology CDS 21421 23040 . - 0 ID=cds-OFJ75587.1;Parent=gene-HMPREF2844_01400;Dbxref=NCBI_GP:OFJ75587.1;Name=OFJ75587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311778.1;locus_tag=HMPREF2844_01400;product=dihydrolipoamide acetyltransferase;protein_id=OFJ75587.1;transl_table=11 KV808175.1 Genbank gene 23041 23256 . + . ID=gene-HMPREF2844_01405;Name=HMPREF2844_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01405 KV808175.1 Protein Homology CDS 23041 23256 . + 0 ID=cds-OFJ75588.1;Parent=gene-HMPREF2844_01405;Dbxref=NCBI_GP:OFJ75588.1;Name=OFJ75588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778441.1;locus_tag=HMPREF2844_01405;product=methionyl-tRNA synthetase;protein_id=OFJ75588.1;transl_table=11 KV808175.1 Genbank gene 23281 25944 . - . ID=gene-HMPREF2844_01410;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=HMPREF2844_01410 KV808175.1 Protein Homology CDS 23281 25944 . - 0 ID=cds-OFJ75589.1;Parent=gene-HMPREF2844_01410;Dbxref=NCBI_GP:OFJ75589.1;Name=OFJ75589.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173178.1;locus_tag=HMPREF2844_01410;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=OFJ75589.1;transl_table=11 KV808175.1 Genbank gene 26327 26944 . - . ID=gene-HMPREF2844_01415;Name=HMPREF2844_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01415 KV808175.1 Protein Homology CDS 26327 26944 . - 0 ID=cds-OFJ75590.1;Parent=gene-HMPREF2844_01415;Dbxref=NCBI_GP:OFJ75590.1;Name=OFJ75590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116747.1;locus_tag=HMPREF2844_01415;product=DNA mismatch repair protein MutS;protein_id=OFJ75590.1;transl_table=11 KV808175.1 Genbank gene 27039 27521 . - . ID=gene-HMPREF2844_01420;Name=HMPREF2844_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01420 KV808175.1 Protein Homology CDS 27039 27521 . - 0 ID=cds-OFJ75591.1;Parent=gene-HMPREF2844_01420;Dbxref=NCBI_GP:OFJ75591.1;Name=OFJ75591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224566.1;locus_tag=HMPREF2844_01420;product=GNAT family acetyltransferase;protein_id=OFJ75591.1;transl_table=11 KV808175.1 Genbank gene 27600 28736 . - . ID=gene-HMPREF2844_01425;Name=HMPREF2844_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01425 KV808175.1 Protein Homology CDS 27600 28736 . - 0 ID=cds-OFJ75592.1;Parent=gene-HMPREF2844_01425;Dbxref=NCBI_GP:OFJ75592.1;Name=OFJ75592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286088.1;locus_tag=HMPREF2844_01425;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=OFJ75592.1;transl_table=11 KV808175.1 Genbank gene 28741 29649 . - . ID=gene-HMPREF2844_01430;Name=HMPREF2844_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01430 KV808175.1 GeneMarkS+ CDS 28741 29649 . - 0 ID=cds-OFJ75593.1;Parent=gene-HMPREF2844_01430;Dbxref=NCBI_GP:OFJ75593.1;Name=OFJ75593.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01430;product=hypothetical protein;protein_id=OFJ75593.1;transl_table=11 KV808175.1 Genbank gene 29716 31191 . - . ID=gene-HMPREF2844_01435;Name=HMPREF2844_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01435 KV808175.1 Protein Homology CDS 29716 31191 . - 0 ID=cds-OFJ75594.1;Parent=gene-HMPREF2844_01435;Dbxref=NCBI_GP:OFJ75594.1;Name=OFJ75594.1;Note=with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173174.1;locus_tag=HMPREF2844_01435;product=anthranilate synthase;protein_id=OFJ75594.1;transl_table=11 KV808175.1 Genbank gene 31421 32719 . + . ID=gene-HMPREF2844_01440;Name=HMPREF2844_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01440 KV808175.1 Protein Homology CDS 31421 32719 . + 0 ID=cds-OFJ75600.1;Parent=gene-HMPREF2844_01440;Dbxref=NCBI_GP:OFJ75600.1;Name=OFJ75600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687426.1;locus_tag=HMPREF2844_01440;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=OFJ75600.1;transl_table=11 KV808175.1 Genbank gene 32842 33783 . + . ID=gene-HMPREF2844_01445;Name=HMPREF2844_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01445 KV808175.1 Protein Homology CDS 32842 33783 . + 0 ID=cds-OFJ75595.1;Parent=gene-HMPREF2844_01445;Dbxref=NCBI_GP:OFJ75595.1;Name=OFJ75595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311495.1;locus_tag=HMPREF2844_01445;product=tRNA dimethylallyltransferase;protein_id=OFJ75595.1;transl_table=11 KV808175.1 Genbank gene 33799 34521 . + . ID=gene-HMPREF2844_01450;Name=HMPREF2844_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01450 KV808175.1 Protein Homology CDS 33799 34521 . + 0 ID=cds-OFJ75601.1;Parent=gene-HMPREF2844_01450;Dbxref=NCBI_GP:OFJ75601.1;Name=OFJ75601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581959.1;locus_tag=HMPREF2844_01450;product=cytidine deaminase;protein_id=OFJ75601.1;transl_table=11 KV808175.1 Genbank gene 34663 38346 . + . ID=gene-HMPREF2844_01455;Name=HMPREF2844_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01455 KV808175.1 Protein Homology CDS 34663 38346 . + 0 ID=cds-OFJ75596.1;Parent=gene-HMPREF2844_01455;Dbxref=NCBI_GP:OFJ75596.1;Name=OFJ75596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003692981.1;locus_tag=HMPREF2844_01455;product=transcription-repair coupling factor;protein_id=OFJ75596.1;transl_table=11 KV808175.1 Genbank gene 38491 39117 . - . ID=gene-HMPREF2844_01460;Name=HMPREF2844_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01460 KV808175.1 Protein Homology CDS 38491 39117 . - 0 ID=cds-OFJ75597.1;Parent=gene-HMPREF2844_01460;Dbxref=NCBI_GP:OFJ75597.1;Name=OFJ75597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686743.1;locus_tag=HMPREF2844_01460;product=hypothetical protein;protein_id=OFJ75597.1;transl_table=11 KV808175.1 Genbank gene 39273 39767 . - . ID=gene-HMPREF2844_01465;Name=HMPREF2844_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01465 KV808175.1 Protein Homology CDS 39273 39767 . - 0 ID=cds-OFJ75598.1;Parent=gene-HMPREF2844_01465;Dbxref=NCBI_GP:OFJ75598.1;Name=OFJ75598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713843.1;locus_tag=HMPREF2844_01465;product=hypothetical protein;protein_id=OFJ75598.1;transl_table=11 KV808175.1 Genbank gene 39992 40711 . - . ID=gene-HMPREF2844_01470;Name=HMPREF2844_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01470 KV808175.1 Protein Homology CDS 39992 40711 . - 0 ID=cds-OFJ75599.1;Parent=gene-HMPREF2844_01470;Dbxref=NCBI_GP:OFJ75599.1;Name=OFJ75599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688574.1;locus_tag=HMPREF2844_01470;product=NAD(P)-dependent oxidoreductase;protein_id=OFJ75599.1;transl_table=11 ##sequence-region KV808176.1 1 6316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808176.1 Genbank region 1 6316 . + . ID=KV808176.1:1..6316;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808176.1 Genbank gene 70 1908 . - . ID=gene-HMPREF2844_01475;Name=HMPREF2844_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01475 KV808176.1 Protein Homology CDS 70 1908 . - 0 ID=cds-OFJ88143.1;Parent=gene-HMPREF2844_01475;Dbxref=NCBI_GP:OFJ88143.1;Name=OFJ88143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201253.1;locus_tag=HMPREF2844_01475;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=OFJ88143.1;transl_table=11 KV808176.1 Genbank gene 2176 3273 . - . ID=gene-HMPREF2844_01480;Name=HMPREF2844_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01480 KV808176.1 Protein Homology CDS 2176 3273 . - 0 ID=cds-OFJ88144.1;Parent=gene-HMPREF2844_01480;Dbxref=NCBI_GP:OFJ88144.1;Name=OFJ88144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269926.1;locus_tag=HMPREF2844_01480;product=riboflavin biosynthesis protein RibD;protein_id=OFJ88144.1;transl_table=11 KV808176.1 Genbank gene 3343 3891 . - . ID=gene-HMPREF2844_01485;Name=HMPREF2844_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01485 KV808176.1 Protein Homology CDS 3343 3891 . - 0 ID=cds-OFJ88145.1;Parent=gene-HMPREF2844_01485;Dbxref=NCBI_GP:OFJ88145.1;Name=OFJ88145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744530.1;locus_tag=HMPREF2844_01485;product=hypothetical protein;protein_id=OFJ88145.1;transl_table=11 KV808176.1 Genbank gene 3914 4375 . - . ID=gene-HMPREF2844_01490;Name=HMPREF2844_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01490 KV808176.1 Protein Homology CDS 3914 4375 . - 0 ID=cds-OFJ88146.1;Parent=gene-HMPREF2844_01490;Dbxref=NCBI_GP:OFJ88146.1;Name=OFJ88146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687167.1;locus_tag=HMPREF2844_01490;product=transcriptional regulator NrdR;protein_id=OFJ88146.1;transl_table=11 KV808176.1 Genbank gene 4519 5361 . - . ID=gene-HMPREF2844_01495;Name=HMPREF2844_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01495 KV808176.1 Protein Homology CDS 4519 5361 . - 0 ID=cds-OFJ88147.1;Parent=gene-HMPREF2844_01495;Dbxref=NCBI_GP:OFJ88147.1;Name=OFJ88147.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756394.1;locus_tag=HMPREF2844_01495;product=3-deoxy-8-phosphooctulonate synthase;protein_id=OFJ88147.1;transl_table=11 KV808176.1 Genbank gene 5449 5832 . - . ID=gene-HMPREF2844_01500;Name=HMPREF2844_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01500 KV808176.1 Protein Homology CDS 5449 5832 . - 0 ID=cds-OFJ88148.1;Parent=gene-HMPREF2844_01500;Dbxref=NCBI_GP:OFJ88148.1;Name=OFJ88148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273380.1;locus_tag=HMPREF2844_01500;product=aspartate 1-decarboxylase;protein_id=OFJ88148.1;transl_table=11 KV808176.1 Genbank gene 5964 6284 . - . ID=gene-HMPREF2844_01505;Name=HMPREF2844_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01505 KV808176.1 Protein Homology CDS 5964 6284 . - 0 ID=cds-OFJ88149.1;Parent=gene-HMPREF2844_01505;Dbxref=NCBI_GP:OFJ88149.1;Name=OFJ88149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778975.1;locus_tag=HMPREF2844_01505;product=cytochrome C biogenesis protein;protein_id=OFJ88149.1;transl_table=11 ##sequence-region KV808177.1 1 12168 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808177.1 Genbank region 1 12168 . + . ID=KV808177.1:1..12168;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808177.1 Genbank pseudogene 1 371 . + . ID=gene-HMPREF2844_01510;Name=HMPREF2844_01510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01510;pseudo=true KV808177.1 Protein Homology CDS 1 371 . + 2 ID=cds-HMPREF2844_01510;Parent=gene-HMPREF2844_01510;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273261.1;locus_tag=HMPREF2844_01510;product=glutamate racemase;pseudo=true;transl_table=11 KV808177.1 Genbank gene 507 2285 . + . ID=gene-HMPREF2844_01515;Name=HMPREF2844_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01515 KV808177.1 Protein Homology CDS 507 2285 . + 0 ID=cds-OFJ87365.1;Parent=gene-HMPREF2844_01515;Dbxref=NCBI_GP:OFJ87365.1;Name=OFJ87365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256136.1;locus_tag=HMPREF2844_01515;product=transferrin-binding protein;protein_id=OFJ87365.1;transl_table=11 KV808177.1 Genbank gene 2372 5101 . + . ID=gene-HMPREF2844_01520;Name=HMPREF2844_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01520 KV808177.1 Protein Homology CDS 2372 5101 . + 0 ID=cds-OFJ87366.1;Parent=gene-HMPREF2844_01520;Dbxref=NCBI_GP:OFJ87366.1;Name=OFJ87366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676674.1;locus_tag=HMPREF2844_01520;product=ligand-gated channel;protein_id=OFJ87366.1;transl_table=11 KV808177.1 Genbank gene 5213 6355 . - . ID=gene-HMPREF2844_01525;Name=HMPREF2844_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01525 KV808177.1 Protein Homology CDS 5213 6355 . - 0 ID=cds-OFJ87367.1;Parent=gene-HMPREF2844_01525;Dbxref=NCBI_GP:OFJ87367.1;Name=OFJ87367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686757.1;locus_tag=HMPREF2844_01525;product=polyamine ABC transporter substrate-binding protein;protein_id=OFJ87367.1;transl_table=11 KV808177.1 Genbank gene 6658 6921 . + . ID=gene-HMPREF2844_01530;Name=HMPREF2844_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01530 KV808177.1 Protein Homology CDS 6658 6921 . + 0 ID=cds-OFJ87368.1;Parent=gene-HMPREF2844_01530;Dbxref=NCBI_GP:OFJ87368.1;Name=OFJ87368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116575.1;locus_tag=HMPREF2844_01530;product=30S ribosomal protein S20;protein_id=OFJ87368.1;transl_table=11 KV808177.1 Genbank gene 7161 8381 . + . ID=gene-HMPREF2844_01535;Name=HMPREF2844_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01535 KV808177.1 Protein Homology CDS 7161 8381 . + 0 ID=cds-OFJ87369.1;Parent=gene-HMPREF2844_01535;Dbxref=NCBI_GP:OFJ87369.1;Name=OFJ87369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779832.1;locus_tag=HMPREF2844_01535;product=phospholipase;protein_id=OFJ87369.1;transl_table=11 KV808177.1 Genbank gene 8539 9219 . + . ID=gene-HMPREF2844_01540;Name=HMPREF2844_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01540 KV808177.1 Protein Homology CDS 8539 9219 . + 0 ID=cds-OFJ87370.1;Parent=gene-HMPREF2844_01540;Dbxref=NCBI_GP:OFJ87370.1;Name=OFJ87370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686836.1;locus_tag=HMPREF2844_01540;product=hypothetical protein;protein_id=OFJ87370.1;transl_table=11 KV808177.1 Genbank gene 9565 10023 . + . ID=gene-HMPREF2844_01545;Name=HMPREF2844_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01545 KV808177.1 Protein Homology CDS 9565 10023 . + 0 ID=cds-OFJ87289.1;Parent=gene-HMPREF2844_01545;Dbxref=NCBI_GP:OFJ87289.1;Name=OFJ87289.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761553.1;locus_tag=HMPREF2844_01545;product=lysozyme inhibitor;protein_id=OFJ87289.1;transl_table=11 KV808177.1 Genbank gene 10087 11895 . + . ID=gene-HMPREF2844_01550;Name=HMPREF2844_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01550 KV808177.1 Protein Homology CDS 10087 11895 . + 0 ID=cds-OFJ87290.1;Parent=gene-HMPREF2844_01550;Dbxref=NCBI_GP:OFJ87290.1;Name=OFJ87290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269822.1;locus_tag=HMPREF2844_01550;product=aspartate--tRNA ligase;protein_id=OFJ87290.1;transl_table=11 ##sequence-region KV808178.1 1 6229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808178.1 Genbank region 1 6229 . + . ID=KV808178.1:1..6229;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808178.1 Genbank gene 1 283 . - . ID=gene-HMPREF2844_01555;Name=HMPREF2844_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01555;partial=true;start_range=.,1 KV808178.1 Protein Homology CDS 1 283 . - 0 ID=cds-OFJ87216.1;Parent=gene-HMPREF2844_01555;Dbxref=NCBI_GP:OFJ87216.1;Name=OFJ87216.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764614.1;locus_tag=HMPREF2844_01555;partial=true;product=topoisomerase;protein_id=OFJ87216.1;start_range=.,1;transl_table=11 KV808178.1 Genbank gene 632 745 . - . ID=gene-HMPREF2844_01560;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF2844_01560 KV808178.1 cmsearch rRNA 632 745 . - . ID=rna-HMPREF2844_01560;Parent=gene-HMPREF2844_01560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_01560;product=5S ribosomal RNA KV808178.1 cmsearch exon 632 745 . - . ID=exon-HMPREF2844_01560-1;Parent=rna-HMPREF2844_01560;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_01560;product=5S ribosomal RNA KV808178.1 Genbank gene 837 3734 . - . ID=gene-HMPREF2844_01565;Name=HMPREF2844_01565;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2844_01565 KV808178.1 Genbank rRNA 837 3734 . - . ID=rna-HMPREF2844_01565;Parent=gene-HMPREF2844_01565;gbkey=rRNA;locus_tag=HMPREF2844_01565;product=23S ribosomal RNA KV808178.1 Genbank exon 837 3734 . - . ID=exon-HMPREF2844_01565-1;Parent=rna-HMPREF2844_01565;gbkey=rRNA;locus_tag=HMPREF2844_01565;product=23S ribosomal RNA KV808178.1 Genbank gene 4162 4237 . - . ID=gene-HMPREF2844_01570;Name=HMPREF2844_01570;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_01570 KV808178.1 tRNAscan-SE tRNA 4162 4237 . - . ID=rna-HMPREF2844_01570;Parent=gene-HMPREF2844_01570;anticodon=(pos:complement(4202..4204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_01570;product=tRNA-Ala KV808178.1 tRNAscan-SE exon 4162 4237 . - . ID=exon-HMPREF2844_01570-1;Parent=rna-HMPREF2844_01570;anticodon=(pos:complement(4202..4204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_01570;product=tRNA-Ala KV808178.1 Genbank gene 4243 4319 . - . ID=gene-HMPREF2844_01575;Name=HMPREF2844_01575;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_01575 KV808178.1 tRNAscan-SE tRNA 4243 4319 . - . ID=rna-HMPREF2844_01575;Parent=gene-HMPREF2844_01575;anticodon=(pos:complement(4283..4285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_01575;product=tRNA-Ile KV808178.1 tRNAscan-SE exon 4243 4319 . - . ID=exon-HMPREF2844_01575-1;Parent=rna-HMPREF2844_01575;anticodon=(pos:complement(4283..4285));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_01575;product=tRNA-Ile KV808178.1 Genbank gene 4418 5968 . - . ID=gene-HMPREF2844_01580;Name=HMPREF2844_01580;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2844_01580 KV808178.1 Genbank rRNA 4418 5968 . - . ID=rna-HMPREF2844_01580;Parent=gene-HMPREF2844_01580;gbkey=rRNA;locus_tag=HMPREF2844_01580;product=16S ribosomal RNA KV808178.1 Genbank exon 4418 5968 . - . ID=exon-HMPREF2844_01580-1;Parent=rna-HMPREF2844_01580;gbkey=rRNA;locus_tag=HMPREF2844_01580;product=16S ribosomal RNA ##sequence-region KV808179.1 1 76221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808179.1 Genbank region 1 76221 . + . ID=KV808179.1:1..76221;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808179.1 Genbank gene 140 820 . + . ID=gene-HMPREF2844_01585;Name=HMPREF2844_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01585 KV808179.1 Protein Homology CDS 140 820 . + 0 ID=cds-OFJ86996.1;Parent=gene-HMPREF2844_01585;Dbxref=NCBI_GP:OFJ86996.1;Name=OFJ86996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270842.1;locus_tag=HMPREF2844_01585;product=hypothetical protein;protein_id=OFJ86996.1;transl_table=11 KV808179.1 Genbank gene 1091 2410 . + . ID=gene-HMPREF2844_01590;Name=HMPREF2844_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01590 KV808179.1 Protein Homology CDS 1091 2410 . + 0 ID=cds-OFJ86997.1;Parent=gene-HMPREF2844_01590;Dbxref=NCBI_GP:OFJ86997.1;Name=OFJ86997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270843.1;locus_tag=HMPREF2844_01590;product=twitching motility protein PilT;protein_id=OFJ86997.1;transl_table=11 KV808179.1 Genbank gene 2641 4077 . - . ID=gene-HMPREF2844_01595;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=HMPREF2844_01595 KV808179.1 Protein Homology CDS 2641 4077 . - 0 ID=cds-OFJ86998.1;Parent=gene-HMPREF2844_01595;Dbxref=NCBI_GP:OFJ86998.1;Name=OFJ86998.1;Note=catalyzes the formation of succinate from succinate semialdehyde%3B NADP dependent;gbkey=CDS;gene=gabD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270844.1;locus_tag=HMPREF2844_01595;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=OFJ86998.1;transl_table=11 KV808179.1 Genbank gene 4379 4936 . + . ID=gene-HMPREF2844_01600;Name=HMPREF2844_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01600 KV808179.1 Protein Homology CDS 4379 4936 . + 0 ID=cds-OFJ86999.1;Parent=gene-HMPREF2844_01600;Dbxref=NCBI_GP:OFJ86999.1;Name=OFJ86999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740788.1;locus_tag=HMPREF2844_01600;product=hypothetical protein;protein_id=OFJ86999.1;transl_table=11 KV808179.1 Genbank gene 5260 6195 . - . ID=gene-HMPREF2844_01605;Name=HMPREF2844_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01605 KV808179.1 Protein Homology CDS 5260 6195 . - 0 ID=cds-OFJ87000.1;Parent=gene-HMPREF2844_01605;Dbxref=NCBI_GP:OFJ87000.1;Name=OFJ87000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219655.1;locus_tag=HMPREF2844_01605;product=preprotein translocase subunit SecF;protein_id=OFJ87000.1;transl_table=11 KV808179.1 Genbank gene 6199 8052 . - . ID=gene-HMPREF2844_01610;Name=HMPREF2844_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01610 KV808179.1 Protein Homology CDS 6199 8052 . - 0 ID=cds-OFJ87001.1;Parent=gene-HMPREF2844_01610;Dbxref=NCBI_GP:OFJ87001.1;Name=OFJ87001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217792.1;locus_tag=HMPREF2844_01610;product=preprotein translocase subunit SecD;protein_id=OFJ87001.1;transl_table=11 KV808179.1 Genbank gene 8128 8394 . - . ID=gene-HMPREF2844_01615;Name=HMPREF2844_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01615 KV808179.1 Protein Homology CDS 8128 8394 . - 0 ID=cds-OFJ87002.1;Parent=gene-HMPREF2844_01615;Dbxref=NCBI_GP:OFJ87002.1;Name=OFJ87002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678762.1;locus_tag=HMPREF2844_01615;product=preprotein translocase subunit YajC;protein_id=OFJ87002.1;transl_table=11 KV808179.1 Genbank gene 8626 9756 . + . ID=gene-HMPREF2844_01620;Name=HMPREF2844_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01620 KV808179.1 Protein Homology CDS 8626 9756 . + 0 ID=cds-OFJ87003.1;Parent=gene-HMPREF2844_01620;Dbxref=NCBI_GP:OFJ87003.1;Name=OFJ87003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270849.1;locus_tag=HMPREF2844_01620;product=deacetylase;protein_id=OFJ87003.1;transl_table=11 KV808179.1 Genbank gene 9865 11459 . - . ID=gene-HMPREF2844_01625;Name=HMPREF2844_01625;end_range=11459,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01625;partial=true KV808179.1 Protein Homology CDS 9865 11459 . - 2 ID=cds-OFJ87004.1;Parent=gene-HMPREF2844_01625;Dbxref=NCBI_GP:OFJ87004.1;Name=OFJ87004.1;end_range=11459,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685427.1;locus_tag=HMPREF2844_01625;partial=true;product=transferrin-binding protein;protein_id=OFJ87004.1;transl_table=11 KV808179.1 Genbank pseudogene 11560 11872 . - . ID=gene-HMPREF2844_01630;Name=HMPREF2844_01630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01630;pseudo=true KV808179.1 GeneMarkS+ CDS 11560 11872 . - 0 ID=cds-HMPREF2844_01630;Parent=gene-HMPREF2844_01630;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01630;product=hypothetical protein;pseudo=true;transl_table=11 KV808179.1 Genbank gene 12085 12708 . - . ID=gene-HMPREF2844_01635;Name=HMPREF2844_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01635 KV808179.1 Protein Homology CDS 12085 12708 . - 0 ID=cds-OFJ86901.1;Parent=gene-HMPREF2844_01635;Dbxref=NCBI_GP:OFJ86901.1;Name=OFJ86901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002257975.1;locus_tag=HMPREF2844_01635;product=heme oxygenase;protein_id=OFJ86901.1;transl_table=11 KV808179.1 Genbank gene 13161 13697 . + . ID=gene-HMPREF2844_01640;Name=HMPREF2844_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01640 KV808179.1 Protein Homology CDS 13161 13697 . + 0 ID=cds-OFJ86902.1;Parent=gene-HMPREF2844_01640;Dbxref=NCBI_GP:OFJ86902.1;Name=OFJ86902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449348.1;locus_tag=HMPREF2844_01640;product=gamma carbonic anhydrase family protein;protein_id=OFJ86902.1;transl_table=11 KV808179.1 Genbank gene 13738 14337 . + . ID=gene-HMPREF2844_01645;Name=HMPREF2844_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01645 KV808179.1 Protein Homology CDS 13738 14337 . + 0 ID=cds-OFJ86903.1;Parent=gene-HMPREF2844_01645;Dbxref=NCBI_GP:OFJ86903.1;Name=OFJ86903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282659.1;locus_tag=HMPREF2844_01645;product=septum formation inhibitor Maf;protein_id=OFJ86903.1;transl_table=11 KV808179.1 Genbank gene 14363 14977 . + . ID=gene-HMPREF2844_01650;Name=HMPREF2844_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01650 KV808179.1 GeneMarkS+ CDS 14363 14977 . + 0 ID=cds-OFJ86904.1;Parent=gene-HMPREF2844_01650;Dbxref=NCBI_GP:OFJ86904.1;Name=OFJ86904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01650;product=hypothetical protein;protein_id=OFJ86904.1;transl_table=11 KV808179.1 Genbank gene 15059 16324 . - . ID=gene-HMPREF2844_01655;Name=HMPREF2844_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01655 KV808179.1 Protein Homology CDS 15059 16324 . - 0 ID=cds-OFJ86905.1;Parent=gene-HMPREF2844_01655;Dbxref=NCBI_GP:OFJ86905.1;Name=OFJ86905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312236.1;locus_tag=HMPREF2844_01655;product=glutamate dehydrogenase;protein_id=OFJ86905.1;transl_table=11 KV808179.1 Genbank gene 16720 17430 . + . ID=gene-HMPREF2844_01660;Name=HMPREF2844_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01660 KV808179.1 Protein Homology CDS 16720 17430 . + 0 ID=cds-OFJ86906.1;Parent=gene-HMPREF2844_01660;Dbxref=NCBI_GP:OFJ86906.1;Name=OFJ86906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282761.1;locus_tag=HMPREF2844_01660;product=phosphoglycolate phosphatase;protein_id=OFJ86906.1;transl_table=11 KV808179.1 Genbank gene 17630 18100 . + . ID=gene-HMPREF2844_01665;Name=HMPREF2844_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01665 KV808179.1 Protein Homology CDS 17630 18100 . + 0 ID=cds-OFJ86907.1;Parent=gene-HMPREF2844_01665;Dbxref=NCBI_GP:OFJ86907.1;Name=OFJ86907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687702.1;locus_tag=HMPREF2844_01665;product=recombinase RecX;protein_id=OFJ86907.1;transl_table=11 KV808179.1 Genbank gene 18174 18668 . - . ID=gene-HMPREF2844_01670;Name=HMPREF2844_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01670 KV808179.1 Protein Homology CDS 18174 18668 . - 0 ID=cds-OFJ86908.1;Parent=gene-HMPREF2844_01670;Dbxref=NCBI_GP:OFJ86908.1;Name=OFJ86908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256519.1;locus_tag=HMPREF2844_01670;product=hypothetical protein;protein_id=OFJ86908.1;transl_table=11 KV808179.1 Genbank gene 18723 19088 . - . ID=gene-HMPREF2844_01675;Name=HMPREF2844_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01675 KV808179.1 Protein Homology CDS 18723 19088 . - 0 ID=cds-OFJ86909.1;Parent=gene-HMPREF2844_01675;Dbxref=NCBI_GP:OFJ86909.1;Name=OFJ86909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686323.1;locus_tag=HMPREF2844_01675;product=rhodanese-like domain-containing protein;protein_id=OFJ86909.1;transl_table=11 KV808179.1 Genbank gene 19214 19549 . - . ID=gene-HMPREF2844_01680;Name=HMPREF2844_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01680 KV808179.1 Protein Homology CDS 19214 19549 . - 0 ID=cds-OFJ86910.1;Parent=gene-HMPREF2844_01680;Dbxref=NCBI_GP:OFJ86910.1;Name=OFJ86910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740764.1;locus_tag=HMPREF2844_01680;product=hypothetical protein;protein_id=OFJ86910.1;transl_table=11 KV808179.1 Genbank gene 19812 20756 . + . ID=gene-HMPREF2844_01685;Name=HMPREF2844_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01685 KV808179.1 Protein Homology CDS 19812 20756 . + 0 ID=cds-OFJ86911.1;Parent=gene-HMPREF2844_01685;Dbxref=NCBI_GP:OFJ86911.1;Name=OFJ86911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687706.1;locus_tag=HMPREF2844_01685;product=AraC family transcriptional regulator;protein_id=OFJ86911.1;transl_table=11 KV808179.1 Genbank gene 21052 22458 . - . ID=gene-HMPREF2844_01690;Name=HMPREF2844_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01690 KV808179.1 Protein Homology CDS 21052 22458 . - 0 ID=cds-OFJ86912.1;Parent=gene-HMPREF2844_01690;Dbxref=NCBI_GP:OFJ86912.1;Name=OFJ86912.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747249.1;locus_tag=HMPREF2844_01690;product=dihydrolipoamide dehydrogenase;protein_id=OFJ86912.1;transl_table=11 KV808179.1 Genbank gene 22714 23451 . - . ID=gene-HMPREF2844_01695;Name=HMPREF2844_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01695 KV808179.1 Protein Homology CDS 22714 23451 . - 0 ID=cds-OFJ86913.1;Parent=gene-HMPREF2844_01695;Dbxref=NCBI_GP:OFJ86913.1;Name=OFJ86913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687708.1;locus_tag=HMPREF2844_01695;product=glutathione peroxidase;protein_id=OFJ86913.1;transl_table=11 KV808179.1 Genbank gene 23640 24410 . - . ID=gene-HMPREF2844_01700;Name=HMPREF2844_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01700 KV808179.1 Protein Homology CDS 23640 24410 . - 0 ID=cds-OFJ86914.1;Parent=gene-HMPREF2844_01700;Dbxref=NCBI_GP:OFJ86914.1;Name=OFJ86914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270861.1;locus_tag=HMPREF2844_01700;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFJ86914.1;transl_table=11 KV808179.1 Genbank gene 24513 25340 . - . ID=gene-HMPREF2844_01705;Name=HMPREF2844_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01705 KV808179.1 Protein Homology CDS 24513 25340 . - 0 ID=cds-OFJ86915.1;Parent=gene-HMPREF2844_01705;Dbxref=NCBI_GP:OFJ86915.1;Name=OFJ86915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255798.1;locus_tag=HMPREF2844_01705;product=DNA-formamidopyrimidine glycosylase;protein_id=OFJ86915.1;transl_table=11 KV808179.1 Genbank gene 25747 26415 . - . ID=gene-HMPREF2844_01710;Name=HMPREF2844_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01710 KV808179.1 Protein Homology CDS 25747 26415 . - 0 ID=cds-OFJ86837.1;Parent=gene-HMPREF2844_01710;Dbxref=NCBI_GP:OFJ86837.1;Name=OFJ86837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448994.1;locus_tag=HMPREF2844_01710;product=methyltransferase;protein_id=OFJ86837.1;transl_table=11 KV808179.1 Genbank gene 26580 27782 . - . ID=gene-HMPREF2844_01715;Name=HMPREF2844_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01715 KV808179.1 Protein Homology CDS 26580 27782 . - 0 ID=cds-OFJ86838.1;Parent=gene-HMPREF2844_01715;Dbxref=NCBI_GP:OFJ86838.1;Name=OFJ86838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270865.1;locus_tag=HMPREF2844_01715;product=tryptophan synthase subunit beta;protein_id=OFJ86838.1;transl_table=11 KV808179.1 Genbank gene 28004 29527 . - . ID=gene-HMPREF2844_01720;Name=HMPREF2844_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01720 KV808179.1 Protein Homology CDS 28004 29527 . - 0 ID=cds-OFJ86839.1;Parent=gene-HMPREF2844_01720;Dbxref=NCBI_GP:OFJ86839.1;Name=OFJ86839.1;Note=catalyzes the formation of fumarate from malate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221888.1;locus_tag=HMPREF2844_01720;product=fumarate hydratase;protein_id=OFJ86839.1;transl_table=11 KV808179.1 Genbank gene 30350 30988 . + . ID=gene-HMPREF2844_01725;Name=HMPREF2844_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01725 KV808179.1 Protein Homology CDS 30350 30988 . + 0 ID=cds-OFJ86840.1;Parent=gene-HMPREF2844_01725;Dbxref=NCBI_GP:OFJ86840.1;Name=OFJ86840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687715.1;locus_tag=HMPREF2844_01725;product=ferredoxin;protein_id=OFJ86840.1;transl_table=11 KV808179.1 Genbank gene 30988 32616 . + . ID=gene-HMPREF2844_01730;Name=HMPREF2844_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01730 KV808179.1 Protein Homology CDS 30988 32616 . + 0 ID=cds-OFJ86841.1;Parent=gene-HMPREF2844_01730;Dbxref=NCBI_GP:OFJ86841.1;Name=OFJ86841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687716.1;locus_tag=HMPREF2844_01730;product=L-aspartate oxidase;protein_id=OFJ86841.1;transl_table=11 KV808179.1 Genbank gene 32613 33866 . + . ID=gene-HMPREF2844_01735;Name=HMPREF2844_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01735 KV808179.1 Protein Homology CDS 32613 33866 . + 0 ID=cds-OFJ86842.1;Parent=gene-HMPREF2844_01735;Dbxref=NCBI_GP:OFJ86842.1;Name=OFJ86842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173873.1;locus_tag=HMPREF2844_01735;product=NADH-quinone oxidoreductase subunit F;protein_id=OFJ86842.1;transl_table=11 KV808179.1 Genbank pseudogene 34386 35836 . + . ID=gene-HMPREF2844_01740;Name=HMPREF2844_01740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01740;pseudo=true KV808179.1 Protein Homology CDS 34386 35836 . + 0 ID=cds-HMPREF2844_01740;Parent=gene-HMPREF2844_01740;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709104.1;locus_tag=HMPREF2844_01740;product=C4-dicarboxylate ABC transporter;pseudo=true;transl_table=11 KV808179.1 Genbank gene 35936 37348 . + . ID=gene-HMPREF2844_01745;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF2844_01745 KV808179.1 Protein Homology CDS 35936 37348 . + 0 ID=cds-OFJ86845.1;Parent=gene-HMPREF2844_01745;Dbxref=NCBI_GP:OFJ86845.1;Name=OFJ86845.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740742.1;locus_tag=HMPREF2844_01745;product=potassium transporter peripheral membrane component;protein_id=OFJ86845.1;transl_table=11 KV808179.1 Genbank gene 37485 38216 . + . ID=gene-HMPREF2844_01750;Name=HMPREF2844_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01750 KV808179.1 Protein Homology CDS 37485 38216 . + 0 ID=cds-OFJ86843.1;Parent=gene-HMPREF2844_01750;Dbxref=NCBI_GP:OFJ86843.1;Name=OFJ86843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746194.1;locus_tag=HMPREF2844_01750;product=hypothetical protein;protein_id=OFJ86843.1;transl_table=11 KV808179.1 Genbank gene 38308 39429 . - . ID=gene-HMPREF2844_01755;Name=HMPREF2844_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01755 KV808179.1 Protein Homology CDS 38308 39429 . - 0 ID=cds-OFJ86844.1;Parent=gene-HMPREF2844_01755;Dbxref=NCBI_GP:OFJ86844.1;Name=OFJ86844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681933.1;locus_tag=HMPREF2844_01755;product=hypothetical protein;protein_id=OFJ86844.1;transl_table=11 KV808179.1 Genbank gene 40047 41681 . - . ID=gene-HMPREF2844_01760;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HMPREF2844_01760 KV808179.1 Protein Homology CDS 40047 41681 . - 0 ID=cds-OFJ86824.1;Parent=gene-HMPREF2844_01760;Dbxref=NCBI_GP:OFJ86824.1;Name=OFJ86824.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687723.1;locus_tag=HMPREF2844_01760;product=CTP synthetase;protein_id=OFJ86824.1;transl_table=11 KV808179.1 Genbank gene 41933 43390 . + . ID=gene-HMPREF2844_01765;Name=HMPREF2844_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01765 KV808179.1 Protein Homology CDS 41933 43390 . + 0 ID=cds-OFJ86825.1;Parent=gene-HMPREF2844_01765;Dbxref=NCBI_GP:OFJ86825.1;Name=OFJ86825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284026.1;locus_tag=HMPREF2844_01765;product=potassium transporter Trk;protein_id=OFJ86825.1;transl_table=11 KV808179.1 Genbank gene 43561 46887 . + . ID=gene-HMPREF2844_01770;Name=HMPREF2844_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01770 KV808179.1 Protein Homology CDS 43561 46887 . + 0 ID=cds-OFJ86826.1;Parent=gene-HMPREF2844_01770;Dbxref=NCBI_GP:OFJ86826.1;Name=OFJ86826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769227.1;locus_tag=HMPREF2844_01770;product=hypothetical protein;protein_id=OFJ86826.1;transl_table=11 KV808179.1 Genbank gene 47379 48737 . - . ID=gene-HMPREF2844_01775;Name=HMPREF2844_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01775 KV808179.1 GeneMarkS+ CDS 47379 48737 . - 0 ID=cds-OFJ86827.1;Parent=gene-HMPREF2844_01775;Dbxref=NCBI_GP:OFJ86827.1;Name=OFJ86827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01775;product=hypothetical protein;protein_id=OFJ86827.1;transl_table=11 KV808179.1 Genbank pseudogene 48885 49111 . - . ID=gene-HMPREF2844_01780;Name=HMPREF2844_01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_01780;pseudo=true KV808179.1 GeneMarkS+ CDS 48885 49111 . - 2 ID=cds-HMPREF2844_01780;Parent=gene-HMPREF2844_01780;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01780;product=hypothetical protein;pseudo=true;transl_table=11 KV808179.1 Genbank gene 49260 51467 . - . ID=gene-HMPREF2844_01785;Name=HMPREF2844_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01785 KV808179.1 Protein Homology CDS 49260 51467 . - 0 ID=cds-OFJ86786.1;Parent=gene-HMPREF2844_01785;Dbxref=NCBI_GP:OFJ86786.1;Name=OFJ86786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215598.1;locus_tag=HMPREF2844_01785;product=DNA helicase II;protein_id=OFJ86786.1;transl_table=11 KV808179.1 Genbank gene 51611 52303 . + . ID=gene-HMPREF2844_01790;Name=HMPREF2844_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01790 KV808179.1 Protein Homology CDS 51611 52303 . + 0 ID=cds-OFJ86806.1;Parent=gene-HMPREF2844_01790;Dbxref=NCBI_GP:OFJ86806.1;Name=OFJ86806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221896.1;locus_tag=HMPREF2844_01790;product=hypothetical protein;protein_id=OFJ86806.1;transl_table=11 KV808179.1 Genbank gene 52540 53598 . - . ID=gene-HMPREF2844_01795;Name=HMPREF2844_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01795 KV808179.1 Protein Homology CDS 52540 53598 . - 0 ID=cds-OFJ86787.1;Parent=gene-HMPREF2844_01795;Dbxref=NCBI_GP:OFJ86787.1;Name=OFJ86787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270877.1;locus_tag=HMPREF2844_01795;product=hypothetical protein;protein_id=OFJ86787.1;transl_table=11 KV808179.1 Genbank gene 53854 54165 . + . ID=gene-HMPREF2844_01800;Name=HMPREF2844_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01800 KV808179.1 Protein Homology CDS 53854 54165 . + 0 ID=cds-OFJ86788.1;Parent=gene-HMPREF2844_01800;Dbxref=NCBI_GP:OFJ86788.1;Name=OFJ86788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744494.1;locus_tag=HMPREF2844_01800;product=late embryogeneis abundant protein;protein_id=OFJ86788.1;transl_table=11 KV808179.1 Genbank gene 54319 55551 . - . ID=gene-HMPREF2844_01805;Name=HMPREF2844_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01805 KV808179.1 Protein Homology CDS 54319 55551 . - 0 ID=cds-OFJ86789.1;Parent=gene-HMPREF2844_01805;Dbxref=NCBI_GP:OFJ86789.1;Name=OFJ86789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270879.1;locus_tag=HMPREF2844_01805;product=Bcr/CflA family drug resistance efflux transporter;protein_id=OFJ86789.1;transl_table=11 KV808179.1 Genbank gene 55766 56224 . + . ID=gene-HMPREF2844_01810;Name=HMPREF2844_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01810 KV808179.1 Protein Homology CDS 55766 56224 . + 0 ID=cds-OFJ86790.1;Parent=gene-HMPREF2844_01810;Dbxref=NCBI_GP:OFJ86790.1;Name=OFJ86790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520949.1;locus_tag=HMPREF2844_01810;product=cell surface protein;protein_id=OFJ86790.1;transl_table=11 KV808179.1 Genbank gene 56217 57302 . + . ID=gene-HMPREF2844_01815;Name=HMPREF2844_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01815 KV808179.1 Protein Homology CDS 56217 57302 . + 0 ID=cds-OFJ86791.1;Parent=gene-HMPREF2844_01815;Dbxref=NCBI_GP:OFJ86791.1;Name=OFJ86791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016670773.1;locus_tag=HMPREF2844_01815;product=glycosyl transferase family 1;protein_id=OFJ86791.1;transl_table=11 KV808179.1 Genbank gene 57340 57918 . + . ID=gene-HMPREF2844_01820;Name=HMPREF2844_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01820 KV808179.1 Protein Homology CDS 57340 57918 . + 0 ID=cds-OFJ86792.1;Parent=gene-HMPREF2844_01820;Dbxref=NCBI_GP:OFJ86792.1;Name=OFJ86792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761702.1;locus_tag=HMPREF2844_01820;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=OFJ86792.1;transl_table=11 KV808179.1 Genbank gene 58002 58754 . + . ID=gene-HMPREF2844_01825;Name=HMPREF2844_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01825 KV808179.1 Protein Homology CDS 58002 58754 . + 0 ID=cds-OFJ86793.1;Parent=gene-HMPREF2844_01825;Dbxref=NCBI_GP:OFJ86793.1;Name=OFJ86793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270882.1;locus_tag=HMPREF2844_01825;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFJ86793.1;transl_table=11 KV808179.1 Genbank gene 58858 60492 . - . ID=gene-HMPREF2844_01830;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=HMPREF2844_01830 KV808179.1 Protein Homology CDS 58858 60492 . - 0 ID=cds-OFJ86794.1;Parent=gene-HMPREF2844_01830;Dbxref=NCBI_GP:OFJ86794.1;Name=OFJ86794.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271863.1;locus_tag=HMPREF2844_01830;product=molecular chaperone GroEL;protein_id=OFJ86794.1;transl_table=11 KV808179.1 Genbank gene 60589 60876 . - . ID=gene-HMPREF2844_01835;Name=HMPREF2844_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01835 KV808179.1 Protein Homology CDS 60589 60876 . - 0 ID=cds-OFJ86795.1;Parent=gene-HMPREF2844_01835;Dbxref=NCBI_GP:OFJ86795.1;Name=OFJ86795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270883.1;locus_tag=HMPREF2844_01835;product=co-chaperone GroES;protein_id=OFJ86795.1;transl_table=11 KV808179.1 Genbank gene 61303 63471 . + . ID=gene-HMPREF2844_01840;Name=HMPREF2844_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01840 KV808179.1 Protein Homology CDS 61303 63471 . + 0 ID=cds-OFJ86796.1;Parent=gene-HMPREF2844_01840;Dbxref=NCBI_GP:OFJ86796.1;Name=OFJ86796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237363.1;locus_tag=HMPREF2844_01840;product=TonB-dependent siderophore receptor;protein_id=OFJ86796.1;transl_table=11 KV808179.1 Genbank gene 63684 64643 . + . ID=gene-HMPREF2844_01845;Name=HMPREF2844_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01845 KV808179.1 Protein Homology CDS 63684 64643 . + 0 ID=cds-OFJ86797.1;Parent=gene-HMPREF2844_01845;Dbxref=NCBI_GP:OFJ86797.1;Name=OFJ86797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271861.1;locus_tag=HMPREF2844_01845;product=iron ABC transporter substrate-binding protein;protein_id=OFJ86797.1;transl_table=11 KV808179.1 Genbank gene 64719 65402 . - . ID=gene-HMPREF2844_01850;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=HMPREF2844_01850 KV808179.1 Protein Homology CDS 64719 65402 . - 0 ID=cds-OFJ86798.1;Parent=gene-HMPREF2844_01850;Dbxref=NCBI_GP:OFJ86798.1;Name=OFJ86798.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270886.1;locus_tag=HMPREF2844_01850;product=phosphoglyceromutase;protein_id=OFJ86798.1;transl_table=11 KV808179.1 Genbank gene 65585 66157 . + . ID=gene-HMPREF2844_01855;Name=HMPREF2844_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01855 KV808179.1 Protein Homology CDS 65585 66157 . + 0 ID=cds-OFJ86799.1;Parent=gene-HMPREF2844_01855;Dbxref=NCBI_GP:OFJ86799.1;Name=OFJ86799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXP4.2;locus_tag=HMPREF2844_01855;product=aromatic acid decarboxylase;protein_id=OFJ86799.1;transl_table=11 KV808179.1 Genbank gene 66258 67550 . + . ID=gene-HMPREF2844_01860;Name=HMPREF2844_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01860 KV808179.1 Protein Homology CDS 66258 67550 . + 0 ID=cds-OFJ86800.1;Parent=gene-HMPREF2844_01860;Dbxref=NCBI_GP:OFJ86800.1;Name=OFJ86800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744521.1;locus_tag=HMPREF2844_01860;product=valine--pyruvate transaminase;protein_id=OFJ86800.1;transl_table=11 KV808179.1 Genbank gene 67795 70014 . + . ID=gene-HMPREF2844_01865;Name=HMPREF2844_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01865 KV808179.1 Protein Homology CDS 67795 70014 . + 0 ID=cds-OFJ86801.1;Parent=gene-HMPREF2844_01865;Dbxref=NCBI_GP:OFJ86801.1;Name=OFJ86801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761358.1;locus_tag=HMPREF2844_01865;product=TonB-dependent receptor;protein_id=OFJ86801.1;transl_table=11 KV808179.1 Genbank gene 70230 70994 . + . ID=gene-HMPREF2844_01870;Name=HMPREF2844_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01870 KV808179.1 Protein Homology CDS 70230 70994 . + 0 ID=cds-OFJ86802.1;Parent=gene-HMPREF2844_01870;Dbxref=NCBI_GP:OFJ86802.1;Name=OFJ86802.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310933.1;locus_tag=HMPREF2844_01870;product=iron-hydroxamate transporter ATP-binding subunit;protein_id=OFJ86802.1;transl_table=11 KV808179.1 Genbank gene 71097 72056 . + . ID=gene-HMPREF2844_01875;Name=HMPREF2844_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01875 KV808179.1 Protein Homology CDS 71097 72056 . + 0 ID=cds-OFJ86803.1;Parent=gene-HMPREF2844_01875;Dbxref=NCBI_GP:OFJ86803.1;Name=OFJ86803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761365.1;locus_tag=HMPREF2844_01875;product=ferrichrome ABC transporter substrate-binding protein;protein_id=OFJ86803.1;transl_table=11 KV808179.1 Genbank gene 72050 74017 . + . ID=gene-HMPREF2844_01880;Name=HMPREF2844_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01880 KV808179.1 Protein Homology CDS 72050 74017 . + 0 ID=cds-OFJ86804.1;Parent=gene-HMPREF2844_01880;Dbxref=NCBI_GP:OFJ86804.1;Name=OFJ86804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761367.1;locus_tag=HMPREF2844_01880;product=Fe3+-hydroxamate ABC transporter permease FhuB;protein_id=OFJ86804.1;transl_table=11 KV808179.1 Genbank gene 74315 75829 . + . ID=gene-HMPREF2844_01885;Name=HMPREF2844_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01885 KV808179.1 Protein Homology CDS 74315 75829 . + 0 ID=cds-OFJ86805.1;Parent=gene-HMPREF2844_01885;Dbxref=NCBI_GP:OFJ86805.1;Name=OFJ86805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221625.1;locus_tag=HMPREF2844_01885;product=catalase;protein_id=OFJ86805.1;transl_table=11 ##sequence-region KV808180.1 1 14768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808180.1 Genbank region 1 14768 . + . ID=KV808180.1:1..14768;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808180.1 Genbank gene 62 547 . - . ID=gene-HMPREF2844_01890;Name=HMPREF2844_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01890 KV808180.1 Protein Homology CDS 62 547 . - 0 ID=cds-OFJ86734.1;Parent=gene-HMPREF2844_01890;Dbxref=NCBI_GP:OFJ86734.1;Name=OFJ86734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759951.1;locus_tag=HMPREF2844_01890;product=ArsR family transcriptional regulator;protein_id=OFJ86734.1;transl_table=11 KV808180.1 cmsearch binding_site 757 853 . + . ID=id-KV808180.1:757..853;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV808180.1 Genbank gene 1057 2157 . + . ID=gene-HMPREF2844_01895;Name=HMPREF2844_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01895 KV808180.1 Protein Homology CDS 1057 2157 . + 0 ID=cds-OFJ86735.1;Parent=gene-HMPREF2844_01895;Dbxref=NCBI_GP:OFJ86735.1;Name=OFJ86735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519543.1;locus_tag=HMPREF2844_01895;product=glycine cleavage system protein T;protein_id=OFJ86735.1;transl_table=11 KV808180.1 Genbank gene 2262 2663 . + . ID=gene-HMPREF2844_01900;Name=HMPREF2844_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01900 KV808180.1 Protein Homology CDS 2262 2663 . + 0 ID=cds-OFJ86736.1;Parent=gene-HMPREF2844_01900;Dbxref=NCBI_GP:OFJ86736.1;Name=OFJ86736.1;Note=part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675796.1;locus_tag=HMPREF2844_01900;product=glycine cleavage system protein H;protein_id=OFJ86736.1;transl_table=11 KV808180.1 Genbank gene 2771 3322 . + . ID=gene-HMPREF2844_01905;Name=HMPREF2844_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01905 KV808180.1 Protein Homology CDS 2771 3322 . + 0 ID=cds-OFJ86737.1;Parent=gene-HMPREF2844_01905;Dbxref=NCBI_GP:OFJ86737.1;Name=OFJ86737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714345.1;locus_tag=HMPREF2844_01905;product=DNA-3-methyladenine glycosylase;protein_id=OFJ86737.1;transl_table=11 KV808180.1 Genbank gene 3560 4852 . + . ID=gene-HMPREF2844_01910;Name=HMPREF2844_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01910 KV808180.1 Protein Homology CDS 3560 4852 . + 0 ID=cds-OFJ86738.1;Parent=gene-HMPREF2844_01910;Dbxref=NCBI_GP:OFJ86738.1;Name=OFJ86738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010567720.1;locus_tag=HMPREF2844_01910;product=ATPase;protein_id=OFJ86738.1;transl_table=11 KV808180.1 Genbank gene 4852 5337 . + . ID=gene-HMPREF2844_01915;Name=HMPREF2844_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01915 KV808180.1 Protein Homology CDS 4852 5337 . + 0 ID=cds-OFJ86745.1;Parent=gene-HMPREF2844_01915;Dbxref=NCBI_GP:OFJ86745.1;Name=OFJ86745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010567719.1;locus_tag=HMPREF2844_01915;product=hypothetical protein;protein_id=OFJ86745.1;transl_table=11 KV808180.1 Genbank gene 5460 8312 . + . ID=gene-HMPREF2844_01920;Name=HMPREF2844_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01920 KV808180.1 Protein Homology CDS 5460 8312 . + 0 ID=cds-OFJ86739.1;Parent=gene-HMPREF2844_01920;Dbxref=NCBI_GP:OFJ86739.1;Name=OFJ86739.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573860.1;locus_tag=HMPREF2844_01920;product=glycine dehydrogenase (aminomethyl-transferring);protein_id=OFJ86739.1;transl_table=11 KV808180.1 Genbank gene 9027 10379 . - . ID=gene-HMPREF2844_01925;Name=HMPREF2844_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01925 KV808180.1 Protein Homology CDS 9027 10379 . - 0 ID=cds-OFJ86740.1;Parent=gene-HMPREF2844_01925;Dbxref=NCBI_GP:OFJ86740.1;Name=OFJ86740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173922.1;locus_tag=HMPREF2844_01925;product=U32 family peptidase;protein_id=OFJ86740.1;transl_table=11 KV808180.1 Genbank gene 10738 11484 . + . ID=gene-HMPREF2844_01930;Name=HMPREF2844_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01930 KV808180.1 Protein Homology CDS 10738 11484 . + 0 ID=cds-OFJ86741.1;Parent=gene-HMPREF2844_01930;Dbxref=NCBI_GP:OFJ86741.1;Name=OFJ86741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235972.1;locus_tag=HMPREF2844_01930;product=amino acid ABC transporter permease;protein_id=OFJ86741.1;transl_table=11 KV808180.1 Genbank gene 11629 13098 . - . ID=gene-HMPREF2844_01935;Name=HMPREF2844_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01935 KV808180.1 Protein Homology CDS 11629 13098 . - 0 ID=cds-OFJ86742.1;Parent=gene-HMPREF2844_01935;Dbxref=NCBI_GP:OFJ86742.1;Name=OFJ86742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311617.1;locus_tag=HMPREF2844_01935;product=hypothetical protein;protein_id=OFJ86742.1;transl_table=11 KV808180.1 Genbank gene 13194 14273 . - . ID=gene-HMPREF2844_01940;Name=HMPREF2844_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01940 KV808180.1 Protein Homology CDS 13194 14273 . - 0 ID=cds-OFJ86743.1;Parent=gene-HMPREF2844_01940;Dbxref=NCBI_GP:OFJ86743.1;Name=OFJ86743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270273.1;locus_tag=HMPREF2844_01940;product=A/G-specific adenine glycosylase;protein_id=OFJ86743.1;transl_table=11 KV808180.1 Genbank gene 14436 14762 . + . ID=gene-HMPREF2844_01945;Name=HMPREF2844_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01945 KV808180.1 GeneMarkS+ CDS 14436 14762 . + 0 ID=cds-OFJ86744.1;Parent=gene-HMPREF2844_01945;Dbxref=NCBI_GP:OFJ86744.1;Name=OFJ86744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_01945;product=hypothetical protein;protein_id=OFJ86744.1;transl_table=11 ##sequence-region KV808181.1 1 7705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808181.1 Genbank region 1 7705 . + . ID=KV808181.1:1..7705;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808181.1 Genbank gene 414 1475 . + . ID=gene-HMPREF2844_01950;Name=HMPREF2844_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01950 KV808181.1 Protein Homology CDS 414 1475 . + 0 ID=cds-OFJ86249.1;Parent=gene-HMPREF2844_01950;Dbxref=NCBI_GP:OFJ86249.1;Name=OFJ86249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582003.1;locus_tag=HMPREF2844_01950;product=biotin synthase BioB;protein_id=OFJ86249.1;transl_table=11 KV808181.1 Genbank gene 1781 2749 . + . ID=gene-HMPREF2844_01955;Name=HMPREF2844_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01955 KV808181.1 Protein Homology CDS 1781 2749 . + 0 ID=cds-OFJ86254.1;Parent=gene-HMPREF2844_01955;Dbxref=NCBI_GP:OFJ86254.1;Name=OFJ86254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762375.1;locus_tag=HMPREF2844_01955;product=aromatic amino acid transporter;protein_id=OFJ86254.1;transl_table=11 KV808181.1 Genbank gene 2918 3961 . - . ID=gene-HMPREF2844_01960;Name=HMPREF2844_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01960 KV808181.1 Protein Homology CDS 2918 3961 . - 0 ID=cds-OFJ86255.1;Parent=gene-HMPREF2844_01960;Dbxref=NCBI_GP:OFJ86255.1;Name=OFJ86255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230486.1;locus_tag=HMPREF2844_01960;product=sulfate ABC transporter substrate-binding protein;protein_id=OFJ86255.1;transl_table=11 KV808181.1 Genbank gene 4279 4908 . - . ID=gene-HMPREF2844_01965;Name=HMPREF2844_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01965 KV808181.1 Protein Homology CDS 4279 4908 . - 0 ID=cds-OFJ86250.1;Parent=gene-HMPREF2844_01965;Dbxref=NCBI_GP:OFJ86250.1;Name=OFJ86250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286334.1;locus_tag=HMPREF2844_01965;product=NAD(P)H-hydrate epimerase;protein_id=OFJ86250.1;transl_table=11 KV808181.1 Genbank gene 4905 5084 . - . ID=gene-HMPREF2844_01970;Name=HMPREF2844_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01970 KV808181.1 Protein Homology CDS 4905 5084 . - 0 ID=cds-OFJ86251.1;Parent=gene-HMPREF2844_01970;Dbxref=NCBI_GP:OFJ86251.1;Name=OFJ86251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271281.1;locus_tag=HMPREF2844_01970;product=hypothetical protein;protein_id=OFJ86251.1;transl_table=11 KV808181.1 Genbank gene 5223 5489 . + . ID=gene-HMPREF2844_01975;Name=HMPREF2844_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01975 KV808181.1 Protein Homology CDS 5223 5489 . + 0 ID=cds-OFJ86252.1;Parent=gene-HMPREF2844_01975;Dbxref=NCBI_GP:OFJ86252.1;Name=OFJ86252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173694.1;locus_tag=HMPREF2844_01975;product=iron transporter;protein_id=OFJ86252.1;transl_table=11 KV808181.1 Genbank gene 5661 7523 . + . ID=gene-HMPREF2844_01980;Name=HMPREF2844_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01980 KV808181.1 Protein Homology CDS 5661 7523 . + 0 ID=cds-OFJ86253.1;Parent=gene-HMPREF2844_01980;Dbxref=NCBI_GP:OFJ86253.1;Name=OFJ86253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783833.1;locus_tag=HMPREF2844_01980;product=ferrous iron transporter B;protein_id=OFJ86253.1;transl_table=11 ##sequence-region KV808182.1 1 131635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808182.1 Genbank region 1 131635 . + . ID=KV808182.1:1..131635;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808182.1 Genbank gene 403 3093 . - . ID=gene-HMPREF2844_01985;Name=HMPREF2844_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01985 KV808182.1 Protein Homology CDS 403 3093 . - 0 ID=cds-OFJ84862.1;Parent=gene-HMPREF2844_01985;Dbxref=NCBI_GP:OFJ84862.1;Name=OFJ84862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271649.1;locus_tag=HMPREF2844_01985;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=OFJ84862.1;transl_table=11 KV808182.1 Genbank gene 3353 4174 . + . ID=gene-HMPREF2844_01990;Name=HMPREF2844_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01990 KV808182.1 Protein Homology CDS 3353 4174 . + 0 ID=cds-OFJ84863.1;Parent=gene-HMPREF2844_01990;Dbxref=NCBI_GP:OFJ84863.1;Name=OFJ84863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341216.1;locus_tag=HMPREF2844_01990;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=OFJ84863.1;transl_table=11 KV808182.1 Genbank gene 4498 5103 . + . ID=gene-HMPREF2844_01995;Name=HMPREF2844_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_01995 KV808182.1 Protein Homology CDS 4498 5103 . + 0 ID=cds-OFJ84864.1;Parent=gene-HMPREF2844_01995;Dbxref=NCBI_GP:OFJ84864.1;Name=OFJ84864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772410.1;locus_tag=HMPREF2844_01995;product=stringent starvation protein A;protein_id=OFJ84864.1;transl_table=11 KV808182.1 Genbank gene 5123 5539 . + . ID=gene-HMPREF2844_02000;Name=HMPREF2844_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02000 KV808182.1 Protein Homology CDS 5123 5539 . + 0 ID=cds-OFJ84865.1;Parent=gene-HMPREF2844_02000;Dbxref=NCBI_GP:OFJ84865.1;Name=OFJ84865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681871.1;locus_tag=HMPREF2844_02000;product=stringent starvation protein B;protein_id=OFJ84865.1;transl_table=11 KV808182.1 Genbank gene 5623 6120 . - . ID=gene-HMPREF2844_02005;Name=HMPREF2844_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02005 KV808182.1 Protein Homology CDS 5623 6120 . - 0 ID=cds-OFJ84866.1;Parent=gene-HMPREF2844_02005;Dbxref=NCBI_GP:OFJ84866.1;Name=OFJ84866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271653.1;locus_tag=HMPREF2844_02005;product=phosphinothricin acetyltransferase;protein_id=OFJ84866.1;transl_table=11 KV808182.1 Genbank gene 6139 6672 . - . ID=gene-HMPREF2844_02010;Name=HMPREF2844_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02010 KV808182.1 Protein Homology CDS 6139 6672 . - 0 ID=cds-OFJ84867.1;Parent=gene-HMPREF2844_02010;Dbxref=NCBI_GP:OFJ84867.1;Name=OFJ84867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745704.1;locus_tag=HMPREF2844_02010;product=isochorismatase;protein_id=OFJ84867.1;transl_table=11 KV808182.1 Genbank gene 6875 7123 . + . ID=gene-HMPREF2844_02015;Name=HMPREF2844_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02015 KV808182.1 Protein Homology CDS 6875 7123 . + 0 ID=cds-OFJ84868.1;Parent=gene-HMPREF2844_02015;Dbxref=NCBI_GP:OFJ84868.1;Name=OFJ84868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757105.1;locus_tag=HMPREF2844_02015;product=transglycosylase;protein_id=OFJ84868.1;transl_table=11 KV808182.1 Genbank gene 7334 7409 . - . ID=gene-HMPREF2844_02020;Name=HMPREF2844_02020;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_02020 KV808182.1 tRNAscan-SE tRNA 7334 7409 . - . ID=rna-HMPREF2844_02020;Parent=gene-HMPREF2844_02020;anticodon=(pos:complement(7374..7376));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_02020;product=tRNA-His KV808182.1 tRNAscan-SE exon 7334 7409 . - . ID=exon-HMPREF2844_02020-1;Parent=rna-HMPREF2844_02020;anticodon=(pos:complement(7374..7376));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_02020;product=tRNA-His KV808182.1 Genbank gene 7426 7502 . - . ID=gene-HMPREF2844_02025;Name=HMPREF2844_02025;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_02025 KV808182.1 tRNAscan-SE tRNA 7426 7502 . - . ID=rna-HMPREF2844_02025;Parent=gene-HMPREF2844_02025;anticodon=(pos:complement(7466..7468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_02025;product=tRNA-Arg KV808182.1 tRNAscan-SE exon 7426 7502 . - . ID=exon-HMPREF2844_02025-1;Parent=rna-HMPREF2844_02025;anticodon=(pos:complement(7466..7468));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_02025;product=tRNA-Arg KV808182.1 Genbank gene 7530 7607 . - . ID=gene-HMPREF2844_02030;Name=HMPREF2844_02030;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_02030 KV808182.1 tRNAscan-SE tRNA 7530 7607 . - . ID=rna-HMPREF2844_02030;Parent=gene-HMPREF2844_02030;anticodon=(pos:complement(7570..7572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_02030;product=tRNA-Pro KV808182.1 tRNAscan-SE exon 7530 7607 . - . ID=exon-HMPREF2844_02030-1;Parent=rna-HMPREF2844_02030;anticodon=(pos:complement(7570..7572));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_02030;product=tRNA-Pro KV808182.1 Genbank gene 7848 8699 . + . ID=gene-HMPREF2844_02035;Name=HMPREF2844_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02035 KV808182.1 Protein Homology CDS 7848 8699 . + 0 ID=cds-OFJ84869.1;Parent=gene-HMPREF2844_02035;Dbxref=NCBI_GP:OFJ84869.1;Name=OFJ84869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574295.1;locus_tag=HMPREF2844_02035;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=OFJ84869.1;transl_table=11 KV808182.1 Genbank gene 8852 9718 . - . ID=gene-HMPREF2844_02040;Name=HMPREF2844_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02040 KV808182.1 Protein Homology CDS 8852 9718 . - 0 ID=cds-OFJ84870.1;Parent=gene-HMPREF2844_02040;Dbxref=NCBI_GP:OFJ84870.1;Name=OFJ84870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221803.1;locus_tag=HMPREF2844_02040;product=glucose-1-phosphate thymidylyltransferase;protein_id=OFJ84870.1;transl_table=11 KV808182.1 Genbank gene 9772 10095 . - . ID=gene-HMPREF2844_02045;Name=HMPREF2844_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02045 KV808182.1 Protein Homology CDS 9772 10095 . - 0 ID=cds-OFJ84904.1;Parent=gene-HMPREF2844_02045;Dbxref=NCBI_GP:OFJ84904.1;Name=OFJ84904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761470.1;locus_tag=HMPREF2844_02045;product=adenosylhomocysteinase;protein_id=OFJ84904.1;transl_table=11 KV808182.1 Genbank gene 10198 11262 . - . ID=gene-HMPREF2844_02050;Name=HMPREF2844_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02050 KV808182.1 Protein Homology CDS 10198 11262 . - 0 ID=cds-OFJ84871.1;Parent=gene-HMPREF2844_02050;Dbxref=NCBI_GP:OFJ84871.1;Name=OFJ84871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761472.1;locus_tag=HMPREF2844_02050;product=dTDP-glucose 4%2C6-dehydratase;protein_id=OFJ84871.1;transl_table=11 KV808182.1 Genbank gene 11374 11646 . - . ID=gene-HMPREF2844_02055;Name=HMPREF2844_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02055 KV808182.1 GeneMarkS+ CDS 11374 11646 . - 0 ID=cds-OFJ84872.1;Parent=gene-HMPREF2844_02055;Dbxref=NCBI_GP:OFJ84872.1;Name=OFJ84872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02055;product=hypothetical protein;protein_id=OFJ84872.1;transl_table=11 KV808182.1 Genbank gene 11648 12250 . + . ID=gene-HMPREF2844_02060;Name=HMPREF2844_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02060 KV808182.1 Protein Homology CDS 11648 12250 . + 0 ID=cds-OFJ84873.1;Parent=gene-HMPREF2844_02060;Dbxref=NCBI_GP:OFJ84873.1;Name=OFJ84873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271659.1;locus_tag=HMPREF2844_02060;product=hypothetical protein;protein_id=OFJ84873.1;transl_table=11 KV808182.1 Genbank gene 12479 14083 . - . ID=gene-HMPREF2844_02065;Name=HMPREF2844_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02065 KV808182.1 Protein Homology CDS 12479 14083 . - 0 ID=cds-OFJ84874.1;Parent=gene-HMPREF2844_02065;Dbxref=NCBI_GP:OFJ84874.1;Name=OFJ84874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743698.1;locus_tag=HMPREF2844_02065;product=transcriptional regulator;protein_id=OFJ84874.1;transl_table=11 KV808182.1 Genbank gene 14076 15665 . - . ID=gene-HMPREF2844_02070;Name=HMPREF2844_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02070 KV808182.1 Protein Homology CDS 14076 15665 . - 0 ID=cds-OFJ84875.1;Parent=gene-HMPREF2844_02070;Dbxref=NCBI_GP:OFJ84875.1;Name=OFJ84875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765319.1;locus_tag=HMPREF2844_02070;product=histidine kinase;protein_id=OFJ84875.1;transl_table=11 KV808182.1 Genbank gene 15830 18139 . - . ID=gene-HMPREF2844_02075;Name=HMPREF2844_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02075 KV808182.1 Protein Homology CDS 15830 18139 . - 0 ID=cds-OFJ84876.1;Parent=gene-HMPREF2844_02075;Dbxref=NCBI_GP:OFJ84876.1;Name=OFJ84876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271662.1;locus_tag=HMPREF2844_02075;product=DNA topoisomerase IV subunit A;protein_id=OFJ84876.1;transl_table=11 KV808182.1 Genbank gene 18496 18774 . - . ID=gene-HMPREF2844_02080;Name=HMPREF2844_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02080 KV808182.1 Protein Homology CDS 18496 18774 . - 0 ID=cds-OFJ84877.1;Parent=gene-HMPREF2844_02080;Dbxref=NCBI_GP:OFJ84877.1;Name=OFJ84877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748371.1;locus_tag=HMPREF2844_02080;product=hypothetical protein;protein_id=OFJ84877.1;transl_table=11 KV808182.1 Genbank gene 19069 19761 . + . ID=gene-HMPREF2844_02085;Name=HMPREF2844_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02085 KV808182.1 Protein Homology CDS 19069 19761 . + 0 ID=cds-OFJ84878.1;Parent=gene-HMPREF2844_02085;Dbxref=NCBI_GP:OFJ84878.1;Name=OFJ84878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283298.1;locus_tag=HMPREF2844_02085;product=repressor;protein_id=OFJ84878.1;transl_table=11 KV808182.1 Genbank gene 19970 20308 . + . ID=gene-HMPREF2844_02090;Name=HMPREF2844_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02090 KV808182.1 Protein Homology CDS 19970 20308 . + 0 ID=cds-OFJ84879.1;Parent=gene-HMPREF2844_02090;Dbxref=NCBI_GP:OFJ84879.1;Name=OFJ84879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002233615.1;locus_tag=HMPREF2844_02090;product=iron-sulfur cluster insertion protein ErpA;protein_id=OFJ84879.1;transl_table=11 KV808182.1 Genbank gene 20651 21319 . + . ID=gene-HMPREF2844_02095;Name=HMPREF2844_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02095 KV808182.1 Protein Homology CDS 20651 21319 . + 0 ID=cds-OFJ84880.1;Parent=gene-HMPREF2844_02095;Dbxref=NCBI_GP:OFJ84880.1;Name=OFJ84880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283699.1;locus_tag=HMPREF2844_02095;product=hypothetical protein;protein_id=OFJ84880.1;transl_table=11 KV808182.1 Genbank gene 21511 22353 . + . ID=gene-HMPREF2844_02100;Name=HMPREF2844_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02100 KV808182.1 Protein Homology CDS 21511 22353 . + 0 ID=cds-OFJ84881.1;Parent=gene-HMPREF2844_02100;Dbxref=NCBI_GP:OFJ84881.1;Name=OFJ84881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017629283.1;locus_tag=HMPREF2844_02100;product=class II glutamine amidotransferase;protein_id=OFJ84881.1;transl_table=11 KV808182.1 Genbank gene 22407 22748 . - . ID=gene-HMPREF2844_02105;Name=HMPREF2844_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02105 KV808182.1 Protein Homology CDS 22407 22748 . - 0 ID=cds-OFJ84882.1;Parent=gene-HMPREF2844_02105;Dbxref=NCBI_GP:OFJ84882.1;Name=OFJ84882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271734.1;locus_tag=HMPREF2844_02105;product=hypothetical protein;protein_id=OFJ84882.1;transl_table=11 KV808182.1 Genbank gene 22878 23945 . - . ID=gene-HMPREF2844_02110;Name=HMPREF2844_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02110 KV808182.1 Protein Homology CDS 22878 23945 . - 0 ID=cds-OFJ84883.1;Parent=gene-HMPREF2844_02110;Dbxref=NCBI_GP:OFJ84883.1;Name=OFJ84883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312779.1;locus_tag=HMPREF2844_02110;product=addiction module protein;protein_id=OFJ84883.1;transl_table=11 KV808182.1 Genbank gene 24091 26364 . - . ID=gene-HMPREF2844_02115;Name=HMPREF2844_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02115 KV808182.1 Protein Homology CDS 24091 26364 . - 0 ID=cds-OFJ84884.1;Parent=gene-HMPREF2844_02115;Dbxref=NCBI_GP:OFJ84884.1;Name=OFJ84884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225921.1;locus_tag=HMPREF2844_02115;product=RNA-binding transcriptional accessory protein;protein_id=OFJ84884.1;transl_table=11 KV808182.1 Genbank gene 26675 28117 . - . ID=gene-HMPREF2844_02120;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=HMPREF2844_02120 KV808182.1 Protein Homology CDS 26675 28117 . - 0 ID=cds-OFJ84905.1;Parent=gene-HMPREF2844_02120;Dbxref=NCBI_GP:OFJ84905.1;Name=OFJ84905.1;Note=responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA;gbkey=CDS;gene=tldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174858.1;locus_tag=HMPREF2844_02120;product=metalloprotease TldD;protein_id=OFJ84905.1;transl_table=11 KV808182.1 Genbank gene 28362 28862 . + . ID=gene-HMPREF2844_02125;Name=HMPREF2844_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02125 KV808182.1 Protein Homology CDS 28362 28862 . + 0 ID=cds-OFJ84885.1;Parent=gene-HMPREF2844_02125;Dbxref=NCBI_GP:OFJ84885.1;Name=OFJ84885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743676.1;locus_tag=HMPREF2844_02125;product=hypothetical protein;protein_id=OFJ84885.1;transl_table=11 KV808182.1 Genbank gene 28990 29760 . + . ID=gene-HMPREF2844_02130;Name=HMPREF2844_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02130 KV808182.1 GeneMarkS+ CDS 28990 29760 . + 0 ID=cds-OFJ84886.1;Parent=gene-HMPREF2844_02130;Dbxref=NCBI_GP:OFJ84886.1;Name=OFJ84886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02130;product=hypothetical protein;protein_id=OFJ84886.1;transl_table=11 KV808182.1 Genbank gene 29871 30161 . + . ID=gene-HMPREF2844_02135;Name=HMPREF2844_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02135 KV808182.1 Protein Homology CDS 29871 30161 . + 0 ID=cds-OFJ84887.1;Parent=gene-HMPREF2844_02135;Dbxref=NCBI_GP:OFJ84887.1;Name=OFJ84887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743675.1;locus_tag=HMPREF2844_02135;product=hypothetical protein;protein_id=OFJ84887.1;transl_table=11 KV808182.1 Genbank gene 30244 31005 . + . ID=gene-HMPREF2844_02140;Name=HMPREF2844_02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02140 KV808182.1 Protein Homology CDS 30244 31005 . + 0 ID=cds-OFJ84888.1;Parent=gene-HMPREF2844_02140;Dbxref=NCBI_GP:OFJ84888.1;Name=OFJ84888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271741.1;locus_tag=HMPREF2844_02140;product=hypothetical protein;protein_id=OFJ84888.1;transl_table=11 KV808182.1 Genbank gene 31048 31710 . + . ID=gene-HMPREF2844_02145;Name=HMPREF2844_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02145 KV808182.1 Protein Homology CDS 31048 31710 . + 0 ID=cds-OFJ84889.1;Parent=gene-HMPREF2844_02145;Dbxref=NCBI_GP:OFJ84889.1;Name=OFJ84889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759847.1;locus_tag=HMPREF2844_02145;product=hypothetical protein;protein_id=OFJ84889.1;transl_table=11 KV808182.1 Genbank gene 31808 32257 . - . ID=gene-HMPREF2844_02150;Name=HMPREF2844_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02150 KV808182.1 Protein Homology CDS 31808 32257 . - 0 ID=cds-OFJ84890.1;Parent=gene-HMPREF2844_02150;Dbxref=NCBI_GP:OFJ84890.1;Name=OFJ84890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687486.1;locus_tag=HMPREF2844_02150;product=hypothetical protein;protein_id=OFJ84890.1;transl_table=11 KV808182.1 Genbank gene 32312 32656 . - . ID=gene-HMPREF2844_02155;Name=HMPREF2844_02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02155 KV808182.1 Protein Homology CDS 32312 32656 . - 0 ID=cds-OFJ84891.1;Parent=gene-HMPREF2844_02155;Dbxref=NCBI_GP:OFJ84891.1;Name=OFJ84891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743670.1;locus_tag=HMPREF2844_02155;product=hypothetical protein;protein_id=OFJ84891.1;transl_table=11 KV808182.1 Genbank gene 32785 33012 . + . ID=gene-HMPREF2844_02160;Name=HMPREF2844_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02160 KV808182.1 Protein Homology CDS 32785 33012 . + 0 ID=cds-OFJ84892.1;Parent=gene-HMPREF2844_02160;Dbxref=NCBI_GP:OFJ84892.1;Name=OFJ84892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767056.1;locus_tag=HMPREF2844_02160;product=hypothetical protein;protein_id=OFJ84892.1;transl_table=11 KV808182.1 Genbank gene 33081 33563 . + . ID=gene-HMPREF2844_02165;Name=HMPREF2844_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02165 KV808182.1 Protein Homology CDS 33081 33563 . + 0 ID=cds-OFJ84893.1;Parent=gene-HMPREF2844_02165;Dbxref=NCBI_GP:OFJ84893.1;Name=OFJ84893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174946.1;locus_tag=HMPREF2844_02165;product=peroxiredoxin;protein_id=OFJ84893.1;transl_table=11 KV808182.1 Genbank gene 33805 34470 . + . ID=gene-HMPREF2844_02170;Name=HMPREF2844_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02170 KV808182.1 Protein Homology CDS 33805 34470 . + 0 ID=cds-OFJ84894.1;Parent=gene-HMPREF2844_02170;Dbxref=NCBI_GP:OFJ84894.1;Name=OFJ84894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271528.1;locus_tag=HMPREF2844_02170;product=hypothetical protein;protein_id=OFJ84894.1;transl_table=11 KV808182.1 Genbank gene 34550 35119 . + . ID=gene-HMPREF2844_02175;Name=HMPREF2844_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02175 KV808182.1 Protein Homology CDS 34550 35119 . + 0 ID=cds-OFJ84895.1;Parent=gene-HMPREF2844_02175;Dbxref=NCBI_GP:OFJ84895.1;Name=OFJ84895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767086.1;locus_tag=HMPREF2844_02175;product=hypothetical protein;protein_id=OFJ84895.1;transl_table=11 KV808182.1 Genbank gene 35204 35896 . + . ID=gene-HMPREF2844_02180;Name=HMPREF2844_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02180 KV808182.1 Protein Homology CDS 35204 35896 . + 0 ID=cds-OFJ84896.1;Parent=gene-HMPREF2844_02180;Dbxref=NCBI_GP:OFJ84896.1;Name=OFJ84896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743662.1;locus_tag=HMPREF2844_02180;product=transglycosylase;protein_id=OFJ84896.1;transl_table=11 KV808182.1 Genbank gene 36087 37799 . + . ID=gene-HMPREF2844_02185;Name=HMPREF2844_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02185 KV808182.1 Protein Homology CDS 36087 37799 . + 0 ID=cds-OFJ84897.1;Parent=gene-HMPREF2844_02185;Dbxref=NCBI_GP:OFJ84897.1;Name=OFJ84897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687490.1;locus_tag=HMPREF2844_02185;product=flotillin;protein_id=OFJ84897.1;transl_table=11 KV808182.1 Genbank gene 37925 41407 . + . ID=gene-HMPREF2844_02190;Name=HMPREF2844_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02190 KV808182.1 Protein Homology CDS 37925 41407 . + 0 ID=cds-OFJ84898.1;Parent=gene-HMPREF2844_02190;Dbxref=NCBI_GP:OFJ84898.1;Name=OFJ84898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174800.1;locus_tag=HMPREF2844_02190;product=chromosome segregation protein SMC;protein_id=OFJ84898.1;transl_table=11 KV808182.1 Genbank gene 41507 41914 . - . ID=gene-HMPREF2844_02195;Name=HMPREF2844_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02195 KV808182.1 Protein Homology CDS 41507 41914 . - 0 ID=cds-OFJ84899.1;Parent=gene-HMPREF2844_02195;Dbxref=NCBI_GP:OFJ84899.1;Name=OFJ84899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768927.1;locus_tag=HMPREF2844_02195;product=flagellar motor protein MotB;protein_id=OFJ84899.1;transl_table=11 KV808182.1 Genbank gene 42266 43804 . - . ID=gene-HMPREF2844_02200;Name=HMPREF2844_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02200 KV808182.1 Protein Homology CDS 42266 43804 . - 0 ID=cds-OFJ84900.1;Parent=gene-HMPREF2844_02200;Dbxref=NCBI_GP:OFJ84900.1;Name=OFJ84900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768931.1;locus_tag=HMPREF2844_02200;product=transporter;protein_id=OFJ84900.1;transl_table=11 KV808182.1 Genbank gene 44215 45474 . - . ID=gene-HMPREF2844_02205;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=HMPREF2844_02205 KV808182.1 Protein Homology CDS 44215 45474 . - 0 ID=cds-OFJ84901.1;Parent=gene-HMPREF2844_02205;Dbxref=NCBI_GP:OFJ84901.1;Name=OFJ84901.1;Note=hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan;gbkey=CDS;gene=amiC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741226.1;locus_tag=HMPREF2844_02205;product=N-acetylmuramoyl-L-alanine amidase;protein_id=OFJ84901.1;transl_table=11 KV808182.1 Genbank gene 45456 45932 . - . ID=gene-HMPREF2844_02210;Name=HMPREF2844_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02210 KV808182.1 Protein Homology CDS 45456 45932 . - 0 ID=cds-OFJ84902.1;Parent=gene-HMPREF2844_02210;Dbxref=NCBI_GP:OFJ84902.1;Name=OFJ84902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759820.1;locus_tag=HMPREF2844_02210;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=OFJ84902.1;transl_table=11 KV808182.1 Genbank gene 46273 47388 . + . ID=gene-HMPREF2844_02215;Name=HMPREF2844_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02215 KV808182.1 Protein Homology CDS 46273 47388 . + 0 ID=cds-OFJ84903.1;Parent=gene-HMPREF2844_02215;Dbxref=NCBI_GP:OFJ84903.1;Name=OFJ84903.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238429.1;locus_tag=HMPREF2844_02215;product=aspartate-semialdehyde dehydrogenase;protein_id=OFJ84903.1;transl_table=11 KV808182.1 Genbank gene 47740 49779 . + . ID=gene-HMPREF2844_02220;Name=HMPREF2844_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02220 KV808182.1 Protein Homology CDS 47740 49779 . + 0 ID=cds-OFJ84906.1;Parent=gene-HMPREF2844_02220;Dbxref=NCBI_GP:OFJ84906.1;Name=OFJ84906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286145.1;locus_tag=HMPREF2844_02220;product=ATP-dependent DNA helicase RecG;protein_id=OFJ84906.1;transl_table=11 KV808182.1 Genbank gene 51028 51525 . + . ID=gene-HMPREF2844_02225;Name=HMPREF2844_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02225 KV808182.1 Protein Homology CDS 51028 51525 . + 0 ID=cds-OFJ84537.1;Parent=gene-HMPREF2844_02225;Dbxref=NCBI_GP:OFJ84537.1;Name=OFJ84537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448269.1;locus_tag=HMPREF2844_02225;product=fimbrial protein;protein_id=OFJ84537.1;transl_table=11 KV808182.1 Genbank gene 51621 52100 . + . ID=gene-HMPREF2844_02230;Name=HMPREF2844_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02230 KV808182.1 Protein Homology CDS 51621 52100 . + 0 ID=cds-OFJ84538.1;Parent=gene-HMPREF2844_02230;Dbxref=NCBI_GP:OFJ84538.1;Name=OFJ84538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519579.1;locus_tag=HMPREF2844_02230;product=prokaryotic N- methylation motif protein;protein_id=OFJ84538.1;transl_table=11 KV808182.1 Genbank gene 52444 53742 . - . ID=gene-HMPREF2844_02235;Name=HMPREF2844_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02235 KV808182.1 Protein Homology CDS 52444 53742 . - 0 ID=cds-OFJ84539.1;Parent=gene-HMPREF2844_02235;Dbxref=NCBI_GP:OFJ84539.1;Name=OFJ84539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256036.1;locus_tag=HMPREF2844_02235;product=tyrosine--tRNA ligase;protein_id=OFJ84539.1;transl_table=11 KV808182.1 Genbank gene 53818 54636 . - . ID=gene-HMPREF2844_02240;Name=HMPREF2844_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02240 KV808182.1 Protein Homology CDS 53818 54636 . - 0 ID=cds-OFJ84540.1;Parent=gene-HMPREF2844_02240;Dbxref=NCBI_GP:OFJ84540.1;Name=OFJ84540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174997.1;locus_tag=HMPREF2844_02240;product=hypothetical protein;protein_id=OFJ84540.1;transl_table=11 KV808182.1 Genbank gene 54725 55816 . - . ID=gene-HMPREF2844_02245;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF2844_02245 KV808182.1 Protein Homology CDS 54725 55816 . - 0 ID=cds-OFJ84541.1;Parent=gene-HMPREF2844_02245;Dbxref=NCBI_GP:OFJ84541.1;Name=OFJ84541.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642527.1;locus_tag=HMPREF2844_02245;product=GTP-binding protein YchF;protein_id=OFJ84541.1;transl_table=11 KV808182.1 Genbank gene 56007 56816 . + . ID=gene-HMPREF2844_02250;Name=HMPREF2844_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02250 KV808182.1 Protein Homology CDS 56007 56816 . + 0 ID=cds-OFJ84542.1;Parent=gene-HMPREF2844_02250;Dbxref=NCBI_GP:OFJ84542.1;Name=OFJ84542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117382.1;locus_tag=HMPREF2844_02250;product=glutamate racemase;protein_id=OFJ84542.1;transl_table=11 KV808182.1 Genbank gene 56931 57773 . - . ID=gene-HMPREF2844_02255;Name=HMPREF2844_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02255 KV808182.1 Protein Homology CDS 56931 57773 . - 0 ID=cds-OFJ84543.1;Parent=gene-HMPREF2844_02255;Dbxref=NCBI_GP:OFJ84543.1;Name=OFJ84543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355680.1;locus_tag=HMPREF2844_02255;product=hypothetical protein;protein_id=OFJ84543.1;transl_table=11 KV808182.1 Genbank gene 58392 59426 . + . ID=gene-HMPREF2844_02260;Name=HMPREF2844_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02260 KV808182.1 Protein Homology CDS 58392 59426 . + 0 ID=cds-OFJ84611.1;Parent=gene-HMPREF2844_02260;Dbxref=NCBI_GP:OFJ84611.1;Name=OFJ84611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002244273.1;locus_tag=HMPREF2844_02260;product=replication protein;protein_id=OFJ84611.1;transl_table=11 KV808182.1 Genbank gene 59472 59762 . + . ID=gene-HMPREF2844_02265;Name=HMPREF2844_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02265 KV808182.1 Protein Homology CDS 59472 59762 . + 0 ID=cds-OFJ84544.1;Parent=gene-HMPREF2844_02265;Dbxref=NCBI_GP:OFJ84544.1;Name=OFJ84544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250780.1;locus_tag=HMPREF2844_02265;product=hypothetical protein;protein_id=OFJ84544.1;transl_table=11 KV808182.1 Genbank gene 59767 59964 . + . ID=gene-HMPREF2844_02270;Name=HMPREF2844_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02270 KV808182.1 Protein Homology CDS 59767 59964 . + 0 ID=cds-OFJ84545.1;Parent=gene-HMPREF2844_02270;Dbxref=NCBI_GP:OFJ84545.1;Name=OFJ84545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215770.1;locus_tag=HMPREF2844_02270;product=hypothetical protein;protein_id=OFJ84545.1;transl_table=11 KV808182.1 Genbank gene 60135 60377 . + . ID=gene-HMPREF2844_02275;Name=HMPREF2844_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02275 KV808182.1 GeneMarkS+ CDS 60135 60377 . + 0 ID=cds-OFJ84546.1;Parent=gene-HMPREF2844_02275;Dbxref=NCBI_GP:OFJ84546.1;Name=OFJ84546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02275;product=hypothetical protein;protein_id=OFJ84546.1;transl_table=11 KV808182.1 Genbank gene 60393 60704 . + . ID=gene-HMPREF2844_02280;Name=HMPREF2844_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02280 KV808182.1 GeneMarkS+ CDS 60393 60704 . + 0 ID=cds-OFJ84547.1;Parent=gene-HMPREF2844_02280;Dbxref=NCBI_GP:OFJ84547.1;Name=OFJ84547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02280;product=hypothetical protein;protein_id=OFJ84547.1;transl_table=11 KV808182.1 Genbank gene 60817 61137 . + . ID=gene-HMPREF2844_02285;Name=HMPREF2844_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02285 KV808182.1 Protein Homology CDS 60817 61137 . + 0 ID=cds-OFJ84612.1;Parent=gene-HMPREF2844_02285;Dbxref=NCBI_GP:OFJ84612.1;Name=OFJ84612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272305.1;locus_tag=HMPREF2844_02285;product=hypothetical protein;protein_id=OFJ84612.1;transl_table=11 KV808182.1 Genbank gene 61112 62680 . + . ID=gene-HMPREF2844_02290;Name=HMPREF2844_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02290 KV808182.1 GeneMarkS+ CDS 61112 62680 . + 0 ID=cds-OFJ84548.1;Parent=gene-HMPREF2844_02290;Dbxref=NCBI_GP:OFJ84548.1;Name=OFJ84548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02290;product=hypothetical protein;protein_id=OFJ84548.1;transl_table=11 KV808182.1 Genbank gene 62689 62970 . + . ID=gene-HMPREF2844_02295;Name=HMPREF2844_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02295 KV808182.1 Protein Homology CDS 62689 62970 . + 0 ID=cds-OFJ84549.1;Parent=gene-HMPREF2844_02295;Dbxref=NCBI_GP:OFJ84549.1;Name=OFJ84549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248044.1;locus_tag=HMPREF2844_02295;product=hypothetical protein;protein_id=OFJ84549.1;transl_table=11 KV808182.1 Genbank gene 62973 64145 . + . ID=gene-HMPREF2844_02300;Name=HMPREF2844_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02300 KV808182.1 GeneMarkS+ CDS 62973 64145 . + 0 ID=cds-OFJ84550.1;Parent=gene-HMPREF2844_02300;Dbxref=NCBI_GP:OFJ84550.1;Name=OFJ84550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02300;product=hypothetical protein;protein_id=OFJ84550.1;transl_table=11 KV808182.1 Genbank gene 64274 64459 . - . ID=gene-HMPREF2844_02305;Name=HMPREF2844_02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02305 KV808182.1 GeneMarkS+ CDS 64274 64459 . - 0 ID=cds-OFJ84551.1;Parent=gene-HMPREF2844_02305;Dbxref=NCBI_GP:OFJ84551.1;Name=OFJ84551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02305;product=hypothetical protein;protein_id=OFJ84551.1;transl_table=11 KV808182.1 Genbank gene 64519 65478 . + . ID=gene-HMPREF2844_02310;Name=HMPREF2844_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02310 KV808182.1 Protein Homology CDS 64519 65478 . + 0 ID=cds-OFJ84552.1;Parent=gene-HMPREF2844_02310;Dbxref=NCBI_GP:OFJ84552.1;Name=OFJ84552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427462.1;locus_tag=HMPREF2844_02310;product=transposase;protein_id=OFJ84552.1;transl_table=11 KV808182.1 Genbank gene 65653 67299 . - . ID=gene-HMPREF2844_02315;Name=HMPREF2844_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02315 KV808182.1 Protein Homology CDS 65653 67299 . - 0 ID=cds-OFJ84553.1;Parent=gene-HMPREF2844_02315;Dbxref=NCBI_GP:OFJ84553.1;Name=OFJ84553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JW48.1;locus_tag=HMPREF2844_02315;product=membrane protein insertase YidC;protein_id=OFJ84553.1;transl_table=11 KV808182.1 Genbank gene 67412 67633 . - . ID=gene-HMPREF2844_02320;Name=HMPREF2844_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02320 KV808182.1 Protein Homology CDS 67412 67633 . - 0 ID=cds-OFJ84554.1;Parent=gene-HMPREF2844_02320;Dbxref=NCBI_GP:OFJ84554.1;Name=OFJ84554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682178.1;locus_tag=HMPREF2844_02320;product=membrane protein insertion efficiency factor YidD;protein_id=OFJ84554.1;transl_table=11 KV808182.1 Genbank gene 67633 67971 . - . ID=gene-HMPREF2844_02325;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HMPREF2844_02325 KV808182.1 Protein Homology CDS 67633 67971 . - 0 ID=cds-OFJ84555.1;Parent=gene-HMPREF2844_02325;Dbxref=NCBI_GP:OFJ84555.1;Name=OFJ84555.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682177.1;locus_tag=HMPREF2844_02325;product=ribonuclease P protein component;protein_id=OFJ84555.1;transl_table=11 KV808182.1 Genbank gene 67974 68108 . - . ID=gene-HMPREF2844_02330;Name=HMPREF2844_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02330 KV808182.1 Protein Homology CDS 67974 68108 . - 0 ID=cds-OFJ84556.1;Parent=gene-HMPREF2844_02330;Dbxref=NCBI_GP:OFJ84556.1;Name=OFJ84556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019958174.1;locus_tag=HMPREF2844_02330;product=50S ribosomal protein L34;protein_id=OFJ84556.1;transl_table=11 KV808182.1 Genbank gene 68534 70084 . + . ID=gene-HMPREF2844_02335;Name=HMPREF2844_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02335 KV808182.1 Protein Homology CDS 68534 70084 . + 0 ID=cds-OFJ84557.1;Parent=gene-HMPREF2844_02335;Dbxref=NCBI_GP:OFJ84557.1;Name=OFJ84557.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758099.1;locus_tag=HMPREF2844_02335;product=chromosomal replication initiation protein DnaA;protein_id=OFJ84557.1;transl_table=11 KV808182.1 Genbank gene 70233 71336 . + . ID=gene-HMPREF2844_02340;Name=HMPREF2844_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02340 KV808182.1 Protein Homology CDS 70233 71336 . + 0 ID=cds-OFJ84558.1;Parent=gene-HMPREF2844_02340;Dbxref=NCBI_GP:OFJ84558.1;Name=OFJ84558.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174415.1;locus_tag=HMPREF2844_02340;product=DNA polymerase III subunit beta;protein_id=OFJ84558.1;transl_table=11 KV808182.1 Genbank gene 71431 71955 . - . ID=gene-HMPREF2844_02345;Name=HMPREF2844_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02345 KV808182.1 Protein Homology CDS 71431 71955 . - 0 ID=cds-OFJ84613.1;Parent=gene-HMPREF2844_02345;Dbxref=NCBI_GP:OFJ84613.1;Name=OFJ84613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686679.1;locus_tag=HMPREF2844_02345;product=RDD family protein;protein_id=OFJ84613.1;transl_table=11 KV808182.1 Genbank gene 72053 72472 . - . ID=gene-HMPREF2844_02350;Name=HMPREF2844_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02350 KV808182.1 Protein Homology CDS 72053 72472 . - 0 ID=cds-OFJ84559.1;Parent=gene-HMPREF2844_02350;Dbxref=NCBI_GP:OFJ84559.1;Name=OFJ84559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002238945.1;locus_tag=HMPREF2844_02350;product=hypothetical protein;protein_id=OFJ84559.1;transl_table=11 KV808182.1 Genbank gene 72736 73671 . - . ID=gene-HMPREF2844_02355;Name=HMPREF2844_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02355 KV808182.1 Protein Homology CDS 72736 73671 . - 0 ID=cds-OFJ84560.1;Parent=gene-HMPREF2844_02355;Dbxref=NCBI_GP:OFJ84560.1;Name=OFJ84560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311104.1;locus_tag=HMPREF2844_02355;product=prolyl aminopeptidase;protein_id=OFJ84560.1;transl_table=11 KV808182.1 Genbank gene 73829 74308 . + . ID=gene-HMPREF2844_02360;Name=HMPREF2844_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02360 KV808182.1 Protein Homology CDS 73829 74308 . + 0 ID=cds-OFJ84561.1;Parent=gene-HMPREF2844_02360;Dbxref=NCBI_GP:OFJ84561.1;Name=OFJ84561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758193.1;locus_tag=HMPREF2844_02360;product=hypothetical protein;protein_id=OFJ84561.1;transl_table=11 KV808182.1 Genbank gene 74308 75309 . + . ID=gene-HMPREF2844_02365;Name=HMPREF2844_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02365 KV808182.1 Protein Homology CDS 74308 75309 . + 0 ID=cds-OFJ84562.1;Parent=gene-HMPREF2844_02365;Dbxref=NCBI_GP:OFJ84562.1;Name=OFJ84562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284721.1;locus_tag=HMPREF2844_02365;product=DNA polymerase III subunit delta;protein_id=OFJ84562.1;transl_table=11 KV808182.1 Genbank gene 75506 76156 . + . ID=gene-HMPREF2844_02370;Name=HMPREF2844_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02370 KV808182.1 Protein Homology CDS 75506 76156 . + 0 ID=cds-OFJ84563.1;Parent=gene-HMPREF2844_02370;Dbxref=NCBI_GP:OFJ84563.1;Name=OFJ84563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686674.1;locus_tag=HMPREF2844_02370;product=peptidase M50;protein_id=OFJ84563.1;transl_table=11 KV808182.1 Genbank gene 76315 77319 . + . ID=gene-HMPREF2844_02375;Name=HMPREF2844_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02375 KV808182.1 Protein Homology CDS 76315 77319 . + 0 ID=cds-OFJ84564.1;Parent=gene-HMPREF2844_02375;Dbxref=NCBI_GP:OFJ84564.1;Name=OFJ84564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016903835.1;locus_tag=HMPREF2844_02375;product=tRNA dihydrouridine synthase DusB;protein_id=OFJ84564.1;transl_table=11 KV808182.1 Genbank gene 77626 77871 . + . ID=gene-HMPREF2844_02380;Name=HMPREF2844_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02380 KV808182.1 Protein Homology CDS 77626 77871 . + 0 ID=cds-OFJ84565.1;Parent=gene-HMPREF2844_02380;Dbxref=NCBI_GP:OFJ84565.1;Name=OFJ84565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741174.1;locus_tag=HMPREF2844_02380;product=Fis family transcriptional regulator;protein_id=OFJ84565.1;transl_table=11 KV808182.1 Genbank gene 77883 78746 . + . ID=gene-HMPREF2844_02385;Name=HMPREF2844_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02385 KV808182.1 Protein Homology CDS 77883 78746 . + 0 ID=cds-OFJ84566.1;Parent=gene-HMPREF2844_02385;Dbxref=NCBI_GP:OFJ84566.1;Name=OFJ84566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765227.1;locus_tag=HMPREF2844_02385;product=hypothetical protein;protein_id=OFJ84566.1;transl_table=11 KV808182.1 Genbank gene 78971 79642 . - . ID=gene-HMPREF2844_02390;Name=HMPREF2844_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02390 KV808182.1 Protein Homology CDS 78971 79642 . - 0 ID=cds-OFJ84567.1;Parent=gene-HMPREF2844_02390;Dbxref=NCBI_GP:OFJ84567.1;Name=OFJ84567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285166.1;locus_tag=HMPREF2844_02390;product=hypothetical protein;protein_id=OFJ84567.1;transl_table=11 KV808182.1 Genbank gene 79639 79998 . - . ID=gene-HMPREF2844_02395;Name=HMPREF2844_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02395 KV808182.1 Protein Homology CDS 79639 79998 . - 0 ID=cds-OFJ84568.1;Parent=gene-HMPREF2844_02395;Dbxref=NCBI_GP:OFJ84568.1;Name=OFJ84568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285167.1;locus_tag=HMPREF2844_02395;product=hypothetical protein;protein_id=OFJ84568.1;transl_table=11 KV808182.1 Genbank gene 80012 80677 . - . ID=gene-HMPREF2844_02400;Name=HMPREF2844_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02400 KV808182.1 Protein Homology CDS 80012 80677 . - 0 ID=cds-OFJ84569.1;Parent=gene-HMPREF2844_02400;Dbxref=NCBI_GP:OFJ84569.1;Name=OFJ84569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741163.1;locus_tag=HMPREF2844_02400;product=hypothetical protein;protein_id=OFJ84569.1;transl_table=11 KV808182.1 Genbank gene 80999 82579 . + . ID=gene-HMPREF2844_02405;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=HMPREF2844_02405 KV808182.1 Protein Homology CDS 80999 82579 . + 0 ID=cds-OFJ84570.1;Parent=gene-HMPREF2844_02405;Dbxref=NCBI_GP:OFJ84570.1;Name=OFJ84570.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448532.1;locus_tag=HMPREF2844_02405;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=OFJ84570.1;transl_table=11 KV808182.1 Genbank gene 82711 83019 . - . ID=gene-HMPREF2844_02410;Name=HMPREF2844_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02410 KV808182.1 Protein Homology CDS 82711 83019 . - 0 ID=cds-OFJ84571.1;Parent=gene-HMPREF2844_02410;Dbxref=NCBI_GP:OFJ84571.1;Name=OFJ84571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271490.1;locus_tag=HMPREF2844_02410;product=hydrolase;protein_id=OFJ84571.1;transl_table=11 KV808182.1 Genbank gene 83132 83926 . - . ID=gene-HMPREF2844_02415;Name=HMPREF2844_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02415 KV808182.1 Protein Homology CDS 83132 83926 . - 0 ID=cds-OFJ84614.1;Parent=gene-HMPREF2844_02415;Dbxref=NCBI_GP:OFJ84614.1;Name=OFJ84614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248144.1;locus_tag=HMPREF2844_02415;product=inositol monophosphatase;protein_id=OFJ84614.1;transl_table=11 KV808182.1 Genbank gene 84003 84728 . + . ID=gene-HMPREF2844_02420;Name=HMPREF2844_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02420 KV808182.1 Protein Homology CDS 84003 84728 . + 0 ID=cds-OFJ84572.1;Parent=gene-HMPREF2844_02420;Dbxref=NCBI_GP:OFJ84572.1;Name=OFJ84572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776382.1;locus_tag=HMPREF2844_02420;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=OFJ84572.1;transl_table=11 KV808182.1 Genbank gene 84929 85891 . + . ID=gene-HMPREF2844_02425;Name=HMPREF2844_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02425 KV808182.1 Protein Homology CDS 84929 85891 . + 0 ID=cds-OFJ84573.1;Parent=gene-HMPREF2844_02425;Dbxref=NCBI_GP:OFJ84573.1;Name=OFJ84573.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773939.1;locus_tag=HMPREF2844_02425;product=3-oxoacyl-ACP synthase;protein_id=OFJ84573.1;transl_table=11 KV808182.1 Genbank gene 86308 87138 . - . ID=gene-HMPREF2844_02430;Name=HMPREF2844_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02430 KV808182.1 GeneMarkS+ CDS 86308 87138 . - 0 ID=cds-OFJ84574.1;Parent=gene-HMPREF2844_02430;Dbxref=NCBI_GP:OFJ84574.1;Name=OFJ84574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02430;product=hypothetical protein;protein_id=OFJ84574.1;transl_table=11 KV808182.1 Genbank gene 87558 88847 . + . ID=gene-HMPREF2844_02435;Name=HMPREF2844_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02435 KV808182.1 Protein Homology CDS 87558 88847 . + 0 ID=cds-OFJ84575.1;Parent=gene-HMPREF2844_02435;Dbxref=NCBI_GP:OFJ84575.1;Name=OFJ84575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776387.1;locus_tag=HMPREF2844_02435;product=DNA-binding protein;protein_id=OFJ84575.1;transl_table=11 KV808182.1 Genbank gene 88867 89793 . + . ID=gene-HMPREF2844_02440;Name=HMPREF2844_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02440 KV808182.1 Protein Homology CDS 88867 89793 . + 0 ID=cds-OFJ84576.1;Parent=gene-HMPREF2844_02440;Dbxref=NCBI_GP:OFJ84576.1;Name=OFJ84576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270112.1;locus_tag=HMPREF2844_02440;product=malonyl CoA-acyl carrier protein transacylase;protein_id=OFJ84576.1;transl_table=11 KV808182.1 Genbank gene 90201 92054 . + . ID=gene-HMPREF2844_02445;Name=HMPREF2844_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02445 KV808182.1 Protein Homology CDS 90201 92054 . + 0 ID=cds-OFJ84577.1;Parent=gene-HMPREF2844_02445;Dbxref=NCBI_GP:OFJ84577.1;Name=OFJ84577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756602.1;locus_tag=HMPREF2844_02445;product=lipid A export permease/ATP-binding protein MsbA;protein_id=OFJ84577.1;transl_table=11 KV808182.1 Genbank gene 92167 95877 . + . ID=gene-HMPREF2844_02450;Name=HMPREF2844_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02450 KV808182.1 Protein Homology CDS 92167 95877 . + 0 ID=cds-OFJ84578.1;Parent=gene-HMPREF2844_02450;Dbxref=NCBI_GP:OFJ84578.1;Name=OFJ84578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762676.1;locus_tag=HMPREF2844_02450;product=glycosyl transferase;protein_id=OFJ84578.1;transl_table=11 KV808182.1 Genbank gene 96021 97031 . + . ID=gene-HMPREF2844_02455;Name=HMPREF2844_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02455 KV808182.1 Protein Homology CDS 96021 97031 . + 0 ID=cds-OFJ84579.1;Parent=gene-HMPREF2844_02455;Dbxref=NCBI_GP:OFJ84579.1;Name=OFJ84579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741141.1;locus_tag=HMPREF2844_02455;product=hypothetical protein;protein_id=OFJ84579.1;transl_table=11 KV808182.1 Genbank gene 97041 98081 . + . ID=gene-HMPREF2844_02460;Name=HMPREF2844_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02460 KV808182.1 Protein Homology CDS 97041 98081 . + 0 ID=cds-OFJ84580.1;Parent=gene-HMPREF2844_02460;Dbxref=NCBI_GP:OFJ84580.1;Name=OFJ84580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270109.1;locus_tag=HMPREF2844_02460;product=hypothetical protein;protein_id=OFJ84580.1;transl_table=11 KV808182.1 Genbank gene 98283 99029 . + . ID=gene-HMPREF2844_02465;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF2844_02465 KV808182.1 Protein Homology CDS 98283 99029 . + 0 ID=cds-OFJ84581.1;Parent=gene-HMPREF2844_02465;Dbxref=NCBI_GP:OFJ84581.1;Name=OFJ84581.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218032.1;locus_tag=HMPREF2844_02465;product=beta-ketoacyl-ACP reductase;protein_id=OFJ84581.1;transl_table=11 KV808182.1 Genbank gene 99092 100411 . - . ID=gene-HMPREF2844_02470;Name=HMPREF2844_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02470 KV808182.1 Protein Homology CDS 99092 100411 . - 0 ID=cds-OFJ84582.1;Parent=gene-HMPREF2844_02470;Dbxref=NCBI_GP:OFJ84582.1;Name=OFJ84582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270108.1;locus_tag=HMPREF2844_02470;product=two-component sensor histidine kinase;protein_id=OFJ84582.1;transl_table=11 KV808182.1 Genbank gene 100488 101159 . - . ID=gene-HMPREF2844_02475;Name=HMPREF2844_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02475 KV808182.1 Protein Homology CDS 100488 101159 . - 0 ID=cds-OFJ84583.1;Parent=gene-HMPREF2844_02475;Dbxref=NCBI_GP:OFJ84583.1;Name=OFJ84583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763089.1;locus_tag=HMPREF2844_02475;product=DNA-binding response regulator;protein_id=OFJ84583.1;transl_table=11 KV808182.1 Genbank gene 101414 102907 . - . ID=gene-HMPREF2844_02480;Name=HMPREF2844_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02480 KV808182.1 Protein Homology CDS 101414 102907 . - 0 ID=cds-OFJ84584.1;Parent=gene-HMPREF2844_02480;Dbxref=NCBI_GP:OFJ84584.1;Name=OFJ84584.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754268.1;locus_tag=HMPREF2844_02480;product=ribonuclease G;protein_id=OFJ84584.1;transl_table=11 KV808182.1 Genbank gene 103245 103502 . + . ID=gene-HMPREF2844_02485;Name=HMPREF2844_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02485 KV808182.1 Protein Homology CDS 103245 103502 . + 0 ID=cds-OFJ84585.1;Parent=gene-HMPREF2844_02485;Dbxref=NCBI_GP:OFJ84585.1;Name=OFJ84585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741129.1;locus_tag=HMPREF2844_02485;product=glutaredoxin;protein_id=OFJ84585.1;transl_table=11 KV808182.1 Genbank gene 103528 103962 . + . ID=gene-HMPREF2844_02490;Name=HMPREF2844_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02490 KV808182.1 Protein Homology CDS 103528 103962 . + 0 ID=cds-OFJ84586.1;Parent=gene-HMPREF2844_02490;Dbxref=NCBI_GP:OFJ84586.1;Name=OFJ84586.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745844.1;locus_tag=HMPREF2844_02490;product=preprotein translocase subunit SecB;protein_id=OFJ84586.1;transl_table=11 KV808182.1 Genbank gene 104042 105103 . - . ID=gene-HMPREF2844_02495;Name=HMPREF2844_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02495 KV808182.1 Protein Homology CDS 104042 105103 . - 0 ID=cds-OFJ84587.1;Parent=gene-HMPREF2844_02495;Dbxref=NCBI_GP:OFJ84587.1;Name=OFJ84587.1;Note=universal genome maintenance protein%3B Kae1/Qri7/OSGEP/YgjD family protein%3B in Archaea%2C some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex%3B kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32)%3B in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32%3B the protein is essential in Escherichia coli and Bacillus subtilis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449446.1;locus_tag=HMPREF2844_02495;product=N(6)-L-threonylcarbamoyladenine synthase TsaD;protein_id=OFJ84587.1;transl_table=11 KV808182.1 Genbank gene 105528 106577 . + . ID=gene-HMPREF2844_02500;Name=HMPREF2844_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02500 KV808182.1 Protein Homology CDS 105528 106577 . + 0 ID=cds-OFJ84588.1;Parent=gene-HMPREF2844_02500;Dbxref=NCBI_GP:OFJ84588.1;Name=OFJ84588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761677.1;locus_tag=HMPREF2844_02500;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=OFJ84588.1;transl_table=11 KV808182.1 Genbank gene 106811 107032 . + . ID=gene-HMPREF2844_02505;Name=HMPREF2844_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02505 KV808182.1 Protein Homology CDS 106811 107032 . + 0 ID=cds-OFJ84589.1;Parent=gene-HMPREF2844_02505;Dbxref=NCBI_GP:OFJ84589.1;Name=OFJ84589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688219.1;locus_tag=HMPREF2844_02505;product=hypothetical protein;protein_id=OFJ84589.1;transl_table=11 KV808182.1 Genbank gene 107180 108442 . - . ID=gene-HMPREF2844_02510;Name=HMPREF2844_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02510 KV808182.1 Protein Homology CDS 107180 108442 . - 0 ID=cds-OFJ84590.1;Parent=gene-HMPREF2844_02510;Dbxref=NCBI_GP:OFJ84590.1;Name=OFJ84590.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741121.1;locus_tag=HMPREF2844_02510;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=OFJ84590.1;transl_table=11 KV808182.1 Genbank gene 109267 110364 . + . ID=gene-HMPREF2844_02515;Name=HMPREF2844_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02515 KV808182.1 Protein Homology CDS 109267 110364 . + 0 ID=cds-OFJ84591.1;Parent=gene-HMPREF2844_02515;Dbxref=NCBI_GP:OFJ84591.1;Name=OFJ84591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780206.1;locus_tag=HMPREF2844_02515;product=calcium-binding protein;protein_id=OFJ84591.1;transl_table=11 KV808182.1 Genbank gene 110432 110899 . + . ID=gene-HMPREF2844_02520;Name=HMPREF2844_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02520 KV808182.1 Protein Homology CDS 110432 110899 . + 0 ID=cds-OFJ84592.1;Parent=gene-HMPREF2844_02520;Dbxref=NCBI_GP:OFJ84592.1;Name=OFJ84592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757128.1;locus_tag=HMPREF2844_02520;product=cell envelope protein SmpA;protein_id=OFJ84592.1;transl_table=11 KV808182.1 Genbank gene 111187 112866 . + . ID=gene-HMPREF2844_02525;Name=HMPREF2844_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02525 KV808182.1 Protein Homology CDS 111187 112866 . + 0 ID=cds-OFJ84593.1;Parent=gene-HMPREF2844_02525;Dbxref=NCBI_GP:OFJ84593.1;Name=OFJ84593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212332.1;locus_tag=HMPREF2844_02525;product=type IV-A pilus assembly ATPase PilB;protein_id=OFJ84593.1;transl_table=11 KV808182.1 Genbank gene 112938 114179 . + . ID=gene-HMPREF2844_02530;Name=HMPREF2844_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02530 KV808182.1 Protein Homology CDS 112938 114179 . + 0 ID=cds-OFJ84594.1;Parent=gene-HMPREF2844_02530;Dbxref=NCBI_GP:OFJ84594.1;Name=OFJ84594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688224.1;locus_tag=HMPREF2844_02530;product=type II secretion system protein F;protein_id=OFJ84594.1;transl_table=11 KV808182.1 Genbank gene 114181 115044 . + . ID=gene-HMPREF2844_02535;Name=HMPREF2844_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02535 KV808182.1 Protein Homology CDS 114181 115044 . + 0 ID=cds-OFJ84595.1;Parent=gene-HMPREF2844_02535;Dbxref=NCBI_GP:OFJ84595.1;Name=OFJ84595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688225.1;locus_tag=HMPREF2844_02535;product=methyltransferase;protein_id=OFJ84595.1;transl_table=11 KV808182.1 Genbank gene 115046 115675 . + . ID=gene-HMPREF2844_02540;Name=HMPREF2844_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02540 KV808182.1 Protein Homology CDS 115046 115675 . + 0 ID=cds-OFJ84596.1;Parent=gene-HMPREF2844_02540;Dbxref=NCBI_GP:OFJ84596.1;Name=OFJ84596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270097.1;locus_tag=HMPREF2844_02540;product=dephospho-CoA kinase;protein_id=OFJ84596.1;transl_table=11 KV808182.1 Genbank gene 116449 117378 . - . ID=gene-HMPREF2844_02545;Name=HMPREF2844_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02545 KV808182.1 Protein Homology CDS 116449 117378 . - 0 ID=cds-OFJ84597.1;Parent=gene-HMPREF2844_02545;Dbxref=NCBI_GP:OFJ84597.1;Name=OFJ84597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760855.1;locus_tag=HMPREF2844_02545;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=OFJ84597.1;transl_table=11 KV808182.1 Genbank gene 117483 117875 . - . ID=gene-HMPREF2844_02550;Name=HMPREF2844_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02550 KV808182.1 Protein Homology CDS 117483 117875 . - 0 ID=cds-OFJ84598.1;Parent=gene-HMPREF2844_02550;Dbxref=NCBI_GP:OFJ84598.1;Name=OFJ84598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747304.1;locus_tag=HMPREF2844_02550;product=hypothetical protein;protein_id=OFJ84598.1;transl_table=11 KV808182.1 Genbank gene 118031 118999 . - . ID=gene-HMPREF2844_02555;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF2844_02555 KV808182.1 Protein Homology CDS 118031 118999 . - 0 ID=cds-OFJ84599.1;Parent=gene-HMPREF2844_02555;Dbxref=NCBI_GP:OFJ84599.1;Name=OFJ84599.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688229.1;locus_tag=HMPREF2844_02555;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=OFJ84599.1;transl_table=11 KV808182.1 Genbank gene 119026 119544 . - . ID=gene-HMPREF2844_02560;Name=HMPREF2844_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02560 KV808182.1 Protein Homology CDS 119026 119544 . - 0 ID=cds-OFJ84600.1;Parent=gene-HMPREF2844_02560;Dbxref=NCBI_GP:OFJ84600.1;Name=OFJ84600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762674.1;locus_tag=HMPREF2844_02560;product=signal peptidase II;protein_id=OFJ84600.1;transl_table=11 KV808182.1 Genbank gene 119798 120169 . + . ID=gene-HMPREF2844_02565;Name=HMPREF2844_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02565 KV808182.1 Protein Homology CDS 119798 120169 . + 0 ID=cds-OFJ84601.1;Parent=gene-HMPREF2844_02565;Dbxref=NCBI_GP:OFJ84601.1;Name=OFJ84601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741102.1;locus_tag=HMPREF2844_02565;product=hypothetical protein;protein_id=OFJ84601.1;transl_table=11 KV808182.1 Genbank gene 120441 121892 . + . ID=gene-HMPREF2844_02570;Name=HMPREF2844_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02570 KV808182.1 Protein Homology CDS 120441 121892 . + 0 ID=cds-OFJ84602.1;Parent=gene-HMPREF2844_02570;Dbxref=NCBI_GP:OFJ84602.1;Name=OFJ84602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683916.1;locus_tag=HMPREF2844_02570;product=hypothetical protein;protein_id=OFJ84602.1;transl_table=11 KV808182.1 Genbank gene 122303 123724 . + . ID=gene-HMPREF2844_02575;Name=HMPREF2844_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02575 KV808182.1 Protein Homology CDS 122303 123724 . + 0 ID=cds-OFJ84603.1;Parent=gene-HMPREF2844_02575;Dbxref=NCBI_GP:OFJ84603.1;Name=OFJ84603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270091.1;locus_tag=HMPREF2844_02575;product=sodium:proton antiporter;protein_id=OFJ84603.1;transl_table=11 KV808182.1 Genbank gene 124090 125433 . + . ID=gene-HMPREF2844_02580;Name=HMPREF2844_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02580 KV808182.1 Protein Homology CDS 124090 125433 . + 0 ID=cds-OFJ84604.1;Parent=gene-HMPREF2844_02580;Dbxref=NCBI_GP:OFJ84604.1;Name=OFJ84604.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273106.1;locus_tag=HMPREF2844_02580;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=OFJ84604.1;transl_table=11 KV808182.1 Genbank gene 125436 126668 . + . ID=gene-HMPREF2844_02585;Name=HMPREF2844_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02585 KV808182.1 Protein Homology CDS 125436 126668 . + 0 ID=cds-OFJ84605.1;Parent=gene-HMPREF2844_02585;Dbxref=NCBI_GP:OFJ84605.1;Name=OFJ84605.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214356.1;locus_tag=HMPREF2844_02585;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=OFJ84605.1;transl_table=11 KV808182.1 Genbank gene 126661 127437 . + . ID=gene-HMPREF2844_02590;Name=HMPREF2844_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02590 KV808182.1 Protein Homology CDS 126661 127437 . + 0 ID=cds-OFJ84606.1;Parent=gene-HMPREF2844_02590;Dbxref=NCBI_GP:OFJ84606.1;Name=OFJ84606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768357.1;locus_tag=HMPREF2844_02590;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit C;protein_id=OFJ84606.1;transl_table=11 KV808182.1 Genbank gene 127437 128063 . + . ID=gene-HMPREF2844_02595;Name=HMPREF2844_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02595 KV808182.1 Protein Homology CDS 127437 128063 . + 0 ID=cds-OFJ84607.1;Parent=gene-HMPREF2844_02595;Dbxref=NCBI_GP:OFJ84607.1;Name=OFJ84607.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684313.1;locus_tag=HMPREF2844_02595;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=OFJ84607.1;transl_table=11 KV808182.1 Genbank gene 128067 128660 . + . ID=gene-HMPREF2844_02600;Name=HMPREF2844_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02600 KV808182.1 Protein Homology CDS 128067 128660 . + 0 ID=cds-OFJ84608.1;Parent=gene-HMPREF2844_02600;Dbxref=NCBI_GP:OFJ84608.1;Name=OFJ84608.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255459.1;locus_tag=HMPREF2844_02600;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=OFJ84608.1;transl_table=11 KV808182.1 Genbank gene 128674 129891 . + . ID=gene-HMPREF2844_02605;Name=HMPREF2844_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02605 KV808182.1 Protein Homology CDS 128674 129891 . + 0 ID=cds-OFJ84609.1;Parent=gene-HMPREF2844_02605;Dbxref=NCBI_GP:OFJ84609.1;Name=OFJ84609.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241210.1;locus_tag=HMPREF2844_02605;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=OFJ84609.1;transl_table=11 KV808182.1 Genbank gene 130072 131262 . - . ID=gene-HMPREF2844_02610;Name=HMPREF2844_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02610 KV808182.1 Protein Homology CDS 130072 131262 . - 0 ID=cds-OFJ84610.1;Parent=gene-HMPREF2844_02610;Dbxref=NCBI_GP:OFJ84610.1;Name=OFJ84610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283344.1;locus_tag=HMPREF2844_02610;product=flavoprotein;protein_id=OFJ84610.1;transl_table=11 ##sequence-region KV808183.1 1 11678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808183.1 Genbank region 1 11678 . + . ID=KV808183.1:1..11678;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808183.1 Genbank gene 81 1556 . - . ID=gene-HMPREF2844_02615;Name=HMPREF2844_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02615 KV808183.1 Protein Homology CDS 81 1556 . - 0 ID=cds-OFJ84460.1;Parent=gene-HMPREF2844_02615;Dbxref=NCBI_GP:OFJ84460.1;Name=OFJ84460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173274.1;locus_tag=HMPREF2844_02615;product=aldehyde dehydrogenase;protein_id=OFJ84460.1;transl_table=11 KV808183.1 Genbank gene 1996 3033 . + . ID=gene-HMPREF2844_02620;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=HMPREF2844_02620 KV808183.1 Protein Homology CDS 1996 3033 . + 0 ID=cds-OFJ84469.1;Parent=gene-HMPREF2844_02620;Dbxref=NCBI_GP:OFJ84469.1;Name=OFJ84469.1;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adhP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006806741.1;locus_tag=HMPREF2844_02620;product=zinc-dependent alcohol dehydrogenase;protein_id=OFJ84469.1;transl_table=11 KV808183.1 Genbank gene 3266 5479 . - . ID=gene-HMPREF2844_02625;Name=HMPREF2844_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02625 KV808183.1 Protein Homology CDS 3266 5479 . - 0 ID=cds-OFJ84470.1;Parent=gene-HMPREF2844_02625;Dbxref=NCBI_GP:OFJ84470.1;Name=OFJ84470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520657.1;locus_tag=HMPREF2844_02625;product=GTP pyrophosphokinase;protein_id=OFJ84470.1;transl_table=11 KV808183.1 Genbank gene 5671 6450 . + . ID=gene-HMPREF2844_02630;Name=HMPREF2844_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02630 KV808183.1 Protein Homology CDS 5671 6450 . + 0 ID=cds-OFJ84461.1;Parent=gene-HMPREF2844_02630;Dbxref=NCBI_GP:OFJ84461.1;Name=OFJ84461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780246.1;locus_tag=HMPREF2844_02630;product=hypothetical protein;protein_id=OFJ84461.1;transl_table=11 KV808183.1 Genbank pseudogene 6490 6825 . + . ID=gene-HMPREF2844_02635;Name=HMPREF2844_02635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_02635;pseudo=true KV808183.1 Protein Homology CDS 6490 6825 . + 0 ID=cds-HMPREF2844_02635;Parent=gene-HMPREF2844_02635;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684537.1;locus_tag=HMPREF2844_02635;product=hypothetical protein;pseudo=true;transl_table=11 KV808183.1 Genbank gene 6852 7598 . + . ID=gene-HMPREF2844_02640;Name=HMPREF2844_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02640 KV808183.1 Protein Homology CDS 6852 7598 . + 0 ID=cds-OFJ84462.1;Parent=gene-HMPREF2844_02640;Dbxref=NCBI_GP:OFJ84462.1;Name=OFJ84462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271586.1;locus_tag=HMPREF2844_02640;product=hypothetical protein;protein_id=OFJ84462.1;transl_table=11 KV808183.1 Genbank gene 7674 8114 . + . ID=gene-HMPREF2844_02645;Name=HMPREF2844_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02645 KV808183.1 Protein Homology CDS 7674 8114 . + 0 ID=cds-OFJ84463.1;Parent=gene-HMPREF2844_02645;Dbxref=NCBI_GP:OFJ84463.1;Name=OFJ84463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271587.1;locus_tag=HMPREF2844_02645;product=hypothetical protein;protein_id=OFJ84463.1;transl_table=11 KV808183.1 Genbank gene 8107 8547 . + . ID=gene-HMPREF2844_02650;Name=HMPREF2844_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02650 KV808183.1 Protein Homology CDS 8107 8547 . + 0 ID=cds-OFJ84464.1;Parent=gene-HMPREF2844_02650;Dbxref=NCBI_GP:OFJ84464.1;Name=OFJ84464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271588.1;locus_tag=HMPREF2844_02650;product=bacteriocin;protein_id=OFJ84464.1;transl_table=11 KV808183.1 Genbank gene 8654 9295 . + . ID=gene-HMPREF2844_02655;Name=HMPREF2844_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02655 KV808183.1 Protein Homology CDS 8654 9295 . + 0 ID=cds-OFJ84465.1;Parent=gene-HMPREF2844_02655;Dbxref=NCBI_GP:OFJ84465.1;Name=OFJ84465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002255853.1;locus_tag=HMPREF2844_02655;product=glutaredoxin;protein_id=OFJ84465.1;transl_table=11 KV808183.1 Genbank gene 9481 9729 . - . ID=gene-HMPREF2844_02660;Name=HMPREF2844_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02660 KV808183.1 Protein Homology CDS 9481 9729 . - 0 ID=cds-OFJ84466.1;Parent=gene-HMPREF2844_02660;Dbxref=NCBI_GP:OFJ84466.1;Name=OFJ84466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757173.1;locus_tag=HMPREF2844_02660;product=hypothetical protein;protein_id=OFJ84466.1;transl_table=11 KV808183.1 Genbank gene 9866 10189 . - . ID=gene-HMPREF2844_02665;Name=HMPREF2844_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02665 KV808183.1 Protein Homology CDS 9866 10189 . - 0 ID=cds-OFJ84467.1;Parent=gene-HMPREF2844_02665;Dbxref=NCBI_GP:OFJ84467.1;Name=OFJ84467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687313.1;locus_tag=HMPREF2844_02665;product=hypothetical protein;protein_id=OFJ84467.1;transl_table=11 KV808183.1 Genbank gene 10188 11603 . + . ID=gene-HMPREF2844_02670;Name=HMPREF2844_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02670 KV808183.1 Protein Homology CDS 10188 11603 . + 0 ID=cds-OFJ84468.1;Parent=gene-HMPREF2844_02670;Dbxref=NCBI_GP:OFJ84468.1;Name=OFJ84468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745770.1;locus_tag=HMPREF2844_02670;product=RNA helicase;protein_id=OFJ84468.1;transl_table=11 ##sequence-region KV808184.1 1 1162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808184.1 Genbank region 1 1162 . + . ID=KV808184.1:1..1162;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808184.1 Genbank gene 96 365 . - . ID=gene-HMPREF2844_02675;Name=HMPREF2844_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02675 KV808184.1 Protein Homology CDS 96 365 . - 0 ID=cds-OFJ84439.1;Parent=gene-HMPREF2844_02675;Dbxref=NCBI_GP:OFJ84439.1;Name=OFJ84439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707025.1;locus_tag=HMPREF2844_02675;product=hypothetical protein;protein_id=OFJ84439.1;transl_table=11 KV808184.1 Genbank pseudogene 372 1040 . - . ID=gene-HMPREF2844_02680;Name=HMPREF2844_02680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_02680;pseudo=true KV808184.1 Protein Homology CDS 372 1040 . - 0 ID=cds-HMPREF2844_02680;Parent=gene-HMPREF2844_02680;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002243250.1;locus_tag=HMPREF2844_02680;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808185.1 1 2806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808185.1 Genbank region 1 2806 . + . ID=KV808185.1:1..2806;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808185.1 Genbank gene 145 1188 . + . ID=gene-HMPREF2844_02685;Name=HMPREF2844_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02685 KV808185.1 Protein Homology CDS 145 1188 . + 0 ID=cds-OFJ84371.1;Parent=gene-HMPREF2844_02685;Dbxref=NCBI_GP:OFJ84371.1;Name=OFJ84371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242977.1;locus_tag=HMPREF2844_02685;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=OFJ84371.1;transl_table=11 KV808185.1 Genbank gene 1285 2364 . - . ID=gene-HMPREF2844_02690;Name=HMPREF2844_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02690 KV808185.1 Protein Homology CDS 1285 2364 . - 0 ID=cds-OFJ84373.1;Parent=gene-HMPREF2844_02690;Dbxref=NCBI_GP:OFJ84373.1;Name=OFJ84373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582239.1;locus_tag=HMPREF2844_02690;product=3-dehydroquinate synthase;protein_id=OFJ84373.1;transl_table=11 KV808185.1 Genbank gene 2568 2804 . - . ID=gene-HMPREF2844_02695;Name=HMPREF2844_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02695 KV808185.1 Protein Homology CDS 2568 2804 . - 0 ID=cds-OFJ84372.1;Parent=gene-HMPREF2844_02695;Dbxref=NCBI_GP:OFJ84372.1;Name=OFJ84372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679538.1;locus_tag=HMPREF2844_02695;product=transposase;protein_id=OFJ84372.1;transl_table=11 ##sequence-region KV808186.1 1 34272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808186.1 Genbank region 1 34272 . + . ID=KV808186.1:1..34272;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808186.1 Genbank gene 79 1611 . - . ID=gene-HMPREF2844_02700;Name=HMPREF2844_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02700 KV808186.1 Protein Homology CDS 79 1611 . - 0 ID=cds-OFJ84366.1;Parent=gene-HMPREF2844_02700;Dbxref=NCBI_GP:OFJ84366.1;Name=OFJ84366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310855.1;locus_tag=HMPREF2844_02700;product=ATP-binding protein;protein_id=OFJ84366.1;transl_table=11 KV808186.1 Genbank gene 1788 3719 . - . ID=gene-HMPREF2844_02705;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HMPREF2844_02705 KV808186.1 Protein Homology CDS 1788 3719 . - 0 ID=cds-OFJ84367.1;Parent=gene-HMPREF2844_02705;Dbxref=NCBI_GP:OFJ84367.1;Name=OFJ84367.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753851.1;locus_tag=HMPREF2844_02705;product=molecular chaperone DnaK;protein_id=OFJ84367.1;transl_table=11 KV808186.1 Genbank gene 4023 4586 . - . ID=gene-HMPREF2844_02710;Name=HMPREF2844_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02710 KV808186.1 Protein Homology CDS 4023 4586 . - 0 ID=cds-OFJ84368.1;Parent=gene-HMPREF2844_02710;Dbxref=NCBI_GP:OFJ84368.1;Name=OFJ84368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7DDM9.1;locus_tag=HMPREF2844_02710;product=nucleotide exchange factor GrpE;protein_id=OFJ84368.1;transl_table=11 KV808186.1 Genbank gene 4758 5576 . + . ID=gene-HMPREF2844_02715;Name=HMPREF2844_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02715 KV808186.1 Protein Homology CDS 4758 5576 . + 0 ID=cds-OFJ84369.1;Parent=gene-HMPREF2844_02715;Dbxref=NCBI_GP:OFJ84369.1;Name=OFJ84369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270423.1;locus_tag=HMPREF2844_02715;product=serine acetyltransferase;protein_id=OFJ84369.1;transl_table=11 KV808186.1 Genbank gene 5995 6603 . - . ID=gene-HMPREF2844_02720;Name=HMPREF2844_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02720 KV808186.1 Protein Homology CDS 5995 6603 . - 0 ID=cds-OFJ84253.1;Parent=gene-HMPREF2844_02720;Dbxref=NCBI_GP:OFJ84253.1;Name=OFJ84253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426000.1;locus_tag=HMPREF2844_02720;product=protein-tyrosine-phosphatase;protein_id=OFJ84253.1;transl_table=11 KV808186.1 Genbank gene 6693 7697 . - . ID=gene-HMPREF2844_02725;Name=HMPREF2844_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02725 KV808186.1 Protein Homology CDS 6693 7697 . - 0 ID=cds-OFJ84232.1;Parent=gene-HMPREF2844_02725;Dbxref=NCBI_GP:OFJ84232.1;Name=OFJ84232.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711211.1;locus_tag=HMPREF2844_02725;product=tRNA dihydrouridine synthase DusA;protein_id=OFJ84232.1;transl_table=11 KV808186.1 Genbank gene 7822 9003 . - . ID=gene-HMPREF2844_02730;Name=HMPREF2844_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02730 KV808186.1 Protein Homology CDS 7822 9003 . - 0 ID=cds-OFJ84233.1;Parent=gene-HMPREF2844_02730;Dbxref=NCBI_GP:OFJ84233.1;Name=OFJ84233.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271049.1;locus_tag=HMPREF2844_02730;product=glycosyl transferase;protein_id=OFJ84233.1;transl_table=11 KV808186.1 Genbank gene 9090 10421 . - . ID=gene-HMPREF2844_02735;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=HMPREF2844_02735 KV808186.1 Protein Homology CDS 9090 10421 . - 0 ID=cds-OFJ84234.1;Parent=gene-HMPREF2844_02735;Dbxref=NCBI_GP:OFJ84234.1;Name=OFJ84234.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311086.1;locus_tag=HMPREF2844_02735;product=metalloprotease PmbA;protein_id=OFJ84234.1;transl_table=11 KV808186.1 Genbank gene 10700 11230 . + . ID=gene-HMPREF2844_02740;Name=HMPREF2844_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02740 KV808186.1 Protein Homology CDS 10700 11230 . + 0 ID=cds-OFJ84235.1;Parent=gene-HMPREF2844_02740;Dbxref=NCBI_GP:OFJ84235.1;Name=OFJ84235.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745867.1;locus_tag=HMPREF2844_02740;product=hypothetical protein;protein_id=OFJ84235.1;transl_table=11 KV808186.1 Genbank gene 11596 15201 . - . ID=gene-HMPREF2844_02745;Name=HMPREF2844_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02745 KV808186.1 Protein Homology CDS 11596 15201 . - 0 ID=cds-OFJ84236.1;Parent=gene-HMPREF2844_02745;Dbxref=NCBI_GP:OFJ84236.1;Name=OFJ84236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747536.1;locus_tag=HMPREF2844_02745;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=OFJ84236.1;transl_table=11 KV808186.1 Genbank gene 15478 17004 . - . ID=gene-HMPREF2844_02750;Name=HMPREF2844_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02750 KV808186.1 Protein Homology CDS 15478 17004 . - 0 ID=cds-OFJ84237.1;Parent=gene-HMPREF2844_02750;Dbxref=NCBI_GP:OFJ84237.1;Name=OFJ84237.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773641.1;locus_tag=HMPREF2844_02750;product=sodium:proline symporter;protein_id=OFJ84237.1;transl_table=11 KV808186.1 Genbank gene 17078 17299 . - . ID=gene-HMPREF2844_02755;Name=HMPREF2844_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02755 KV808186.1 GeneMarkS+ CDS 17078 17299 . - 0 ID=cds-OFJ84238.1;Parent=gene-HMPREF2844_02755;Dbxref=NCBI_GP:OFJ84238.1;Name=OFJ84238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_02755;product=hypothetical protein;protein_id=OFJ84238.1;transl_table=11 KV808186.1 Genbank gene 17521 19032 . + . ID=gene-HMPREF2844_02760;Name=HMPREF2844_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02760 KV808186.1 Protein Homology CDS 17521 19032 . + 0 ID=cds-OFJ84239.1;Parent=gene-HMPREF2844_02760;Dbxref=NCBI_GP:OFJ84239.1;Name=OFJ84239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758015.1;locus_tag=HMPREF2844_02760;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=OFJ84239.1;transl_table=11 KV808186.1 Genbank gene 19350 19670 . + . ID=gene-HMPREF2844_02765;Name=HMPREF2844_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02765 KV808186.1 Protein Homology CDS 19350 19670 . + 0 ID=cds-OFJ84240.1;Parent=gene-HMPREF2844_02765;Dbxref=NCBI_GP:OFJ84240.1;Name=OFJ84240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763371.1;locus_tag=HMPREF2844_02765;product=membrane fusogenic activity family protein;protein_id=OFJ84240.1;transl_table=11 KV808186.1 Genbank gene 19684 21180 . + . ID=gene-HMPREF2844_02770;Name=HMPREF2844_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02770 KV808186.1 Protein Homology CDS 19684 21180 . + 0 ID=cds-OFJ84241.1;Parent=gene-HMPREF2844_02770;Dbxref=NCBI_GP:OFJ84241.1;Name=OFJ84241.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010981279.1;locus_tag=HMPREF2844_02770;product=ATP-dependent protease;protein_id=OFJ84241.1;transl_table=11 KV808186.1 Genbank gene 21237 21713 . + . ID=gene-HMPREF2844_02775;Name=HMPREF2844_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02775 KV808186.1 Protein Homology CDS 21237 21713 . + 0 ID=cds-OFJ84242.1;Parent=gene-HMPREF2844_02775;Dbxref=NCBI_GP:OFJ84242.1;Name=OFJ84242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744015.1;locus_tag=HMPREF2844_02775;product=hypothetical protein;protein_id=OFJ84242.1;transl_table=11 KV808186.1 Genbank gene 22540 23592 . + . ID=gene-HMPREF2844_02780;Name=HMPREF2844_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02780 KV808186.1 Protein Homology CDS 22540 23592 . + 0 ID=cds-OFJ84243.1;Parent=gene-HMPREF2844_02780;Dbxref=NCBI_GP:OFJ84243.1;Name=OFJ84243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757158.1;locus_tag=HMPREF2844_02780;product=cell division protein FtsN;protein_id=OFJ84243.1;transl_table=11 KV808186.1 Genbank gene 23603 24262 . + . ID=gene-HMPREF2844_02785;Name=HMPREF2844_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02785 KV808186.1 Protein Homology CDS 23603 24262 . + 0 ID=cds-OFJ84244.1;Parent=gene-HMPREF2844_02785;Dbxref=NCBI_GP:OFJ84244.1;Name=OFJ84244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763359.1;locus_tag=HMPREF2844_02785;product=disulfide bond formation protein DsbA;protein_id=OFJ84244.1;transl_table=11 KV808186.1 Genbank gene 24547 25371 . + . ID=gene-HMPREF2844_02790;Name=HMPREF2844_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02790 KV808186.1 Protein Homology CDS 24547 25371 . + 0 ID=cds-OFJ84254.1;Parent=gene-HMPREF2844_02790;Dbxref=NCBI_GP:OFJ84254.1;Name=OFJ84254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780226.1;locus_tag=HMPREF2844_02790;product=undecaprenyl-diphosphatase;protein_id=OFJ84254.1;transl_table=11 KV808186.1 Genbank gene 25489 26199 . - . ID=gene-HMPREF2844_02795;Name=HMPREF2844_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02795 KV808186.1 Protein Homology CDS 25489 26199 . - 0 ID=cds-OFJ84245.1;Parent=gene-HMPREF2844_02795;Dbxref=NCBI_GP:OFJ84245.1;Name=OFJ84245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764633.1;locus_tag=HMPREF2844_02795;product=tetrapyrrole methylase;protein_id=OFJ84245.1;transl_table=11 KV808186.1 Genbank gene 26259 26849 . - . ID=gene-HMPREF2844_02800;Name=HMPREF2844_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02800 KV808186.1 Protein Homology CDS 26259 26849 . - 0 ID=cds-OFJ84246.1;Parent=gene-HMPREF2844_02800;Dbxref=NCBI_GP:OFJ84246.1;Name=OFJ84246.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449528.1;locus_tag=HMPREF2844_02800;product=septum formation inhibitor Maf;protein_id=OFJ84246.1;transl_table=11 KV808186.1 Genbank gene 26904 27404 . + . ID=gene-HMPREF2844_02805;Name=HMPREF2844_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02805 KV808186.1 Protein Homology CDS 26904 27404 . + 0 ID=cds-OFJ84247.1;Parent=gene-HMPREF2844_02805;Dbxref=NCBI_GP:OFJ84247.1;Name=OFJ84247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776445.1;locus_tag=HMPREF2844_02805;product=hypothetical protein;protein_id=OFJ84247.1;transl_table=11 KV808186.1 Genbank gene 27439 27618 . + . ID=gene-HMPREF2844_02810;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF2844_02810 KV808186.1 Protein Homology CDS 27439 27618 . + 0 ID=cds-OFJ84248.1;Parent=gene-HMPREF2844_02810;Dbxref=NCBI_GP:OFJ84248.1;Name=OFJ84248.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642843.1;locus_tag=HMPREF2844_02810;product=50S ribosomal protein L32;protein_id=OFJ84248.1;transl_table=11 KV808186.1 Genbank gene 27778 28305 . + . ID=gene-HMPREF2844_02815;Name=HMPREF2844_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02815 KV808186.1 Protein Homology CDS 27778 28305 . + 0 ID=cds-OFJ84255.1;Parent=gene-HMPREF2844_02815;Dbxref=NCBI_GP:OFJ84255.1;Name=OFJ84255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003708386.1;locus_tag=HMPREF2844_02815;product=phosphoribosyltransferase;protein_id=OFJ84255.1;transl_table=11 KV808186.1 Genbank gene 28593 29651 . + . ID=gene-HMPREF2844_02820;Name=HMPREF2844_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02820 KV808186.1 Protein Homology CDS 28593 29651 . + 0 ID=cds-OFJ84249.1;Parent=gene-HMPREF2844_02820;Dbxref=NCBI_GP:OFJ84249.1;Name=OFJ84249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744030.1;locus_tag=HMPREF2844_02820;product=phosphate acyltransferase;protein_id=OFJ84249.1;transl_table=11 KV808186.1 Genbank gene 30142 32205 . - . ID=gene-HMPREF2844_02825;Name=HMPREF2844_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02825 KV808186.1 Protein Homology CDS 30142 32205 . - 0 ID=cds-OFJ84250.1;Parent=gene-HMPREF2844_02825;Dbxref=NCBI_GP:OFJ84250.1;Name=OFJ84250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240026.1;locus_tag=HMPREF2844_02825;product=glycine--tRNA ligase subunit beta;protein_id=OFJ84250.1;transl_table=11 KV808186.1 Genbank gene 32322 33218 . - . ID=gene-HMPREF2844_02830;Name=HMPREF2844_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02830 KV808186.1 Protein Homology CDS 32322 33218 . - 0 ID=cds-OFJ84251.1;Parent=gene-HMPREF2844_02830;Dbxref=NCBI_GP:OFJ84251.1;Name=OFJ84251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239341.1;locus_tag=HMPREF2844_02830;product=glycine--tRNA ligase subunit alpha;protein_id=OFJ84251.1;transl_table=11 KV808186.1 Genbank gene 33407 34201 . + . ID=gene-HMPREF2844_02835;Name=HMPREF2844_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02835 KV808186.1 Protein Homology CDS 33407 34201 . + 0 ID=cds-OFJ84252.1;Parent=gene-HMPREF2844_02835;Dbxref=NCBI_GP:OFJ84252.1;Name=OFJ84252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744040.1;locus_tag=HMPREF2844_02835;product=3'-5' exonuclease;protein_id=OFJ84252.1;transl_table=11 ##sequence-region KV808187.1 1 9901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808187.1 Genbank region 1 9901 . + . ID=KV808187.1:1..9901;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808187.1 Genbank gene 1 741 . - . ID=gene-HMPREF2844_02840;Name=HMPREF2844_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02840;partial=true;start_range=.,1 KV808187.1 Protein Homology CDS 1 741 . - 0 ID=cds-OFJ84203.1;Parent=gene-HMPREF2844_02840;Dbxref=NCBI_GP:OFJ84203.1;Name=OFJ84203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765708.1;locus_tag=HMPREF2844_02840;partial=true;product=alpha/beta hydrolase;protein_id=OFJ84203.1;start_range=.,1;transl_table=11 KV808187.1 Genbank gene 886 1785 . - . ID=gene-HMPREF2844_02845;Name=HMPREF2844_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02845 KV808187.1 Protein Homology CDS 886 1785 . - 0 ID=cds-OFJ84204.1;Parent=gene-HMPREF2844_02845;Dbxref=NCBI_GP:OFJ84204.1;Name=OFJ84204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271274.1;locus_tag=HMPREF2844_02845;product=NAD(P)H-hydrate dehydratase;protein_id=OFJ84204.1;transl_table=11 KV808187.1 Genbank gene 1920 2579 . + . ID=gene-HMPREF2844_02850;Name=HMPREF2844_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02850 KV808187.1 Protein Homology CDS 1920 2579 . + 0 ID=cds-OFJ84205.1;Parent=gene-HMPREF2844_02850;Dbxref=NCBI_GP:OFJ84205.1;Name=OFJ84205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519936.1;locus_tag=HMPREF2844_02850;product=nickel-dependent hydrogenase b-type cytochrome subunit;protein_id=OFJ84205.1;transl_table=11 KV808187.1 Genbank gene 2640 3239 . - . ID=gene-HMPREF2844_02855;Name=HMPREF2844_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02855 KV808187.1 Protein Homology CDS 2640 3239 . - 0 ID=cds-OFJ84206.1;Parent=gene-HMPREF2844_02855;Dbxref=NCBI_GP:OFJ84206.1;Name=OFJ84206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747155.1;locus_tag=HMPREF2844_02855;product=toluene tolerance protein;protein_id=OFJ84206.1;transl_table=11 KV808187.1 Genbank gene 3367 3870 . + . ID=gene-HMPREF2844_02860;Name=HMPREF2844_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02860 KV808187.1 Protein Homology CDS 3367 3870 . + 0 ID=cds-OFJ84207.1;Parent=gene-HMPREF2844_02860;Dbxref=NCBI_GP:OFJ84207.1;Name=OFJ84207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742370.1;locus_tag=HMPREF2844_02860;product=hypothetical protein;protein_id=OFJ84207.1;transl_table=11 KV808187.1 Genbank gene 4071 4751 . - . ID=gene-HMPREF2844_02865;Name=HMPREF2844_02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02865 KV808187.1 Protein Homology CDS 4071 4751 . - 0 ID=cds-OFJ84208.1;Parent=gene-HMPREF2844_02865;Dbxref=NCBI_GP:OFJ84208.1;Name=OFJ84208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687535.1;locus_tag=HMPREF2844_02865;product=hypothetical protein;protein_id=OFJ84208.1;transl_table=11 KV808187.1 Genbank gene 5397 6521 . + . ID=gene-HMPREF2844_02870;Name=HMPREF2844_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02870 KV808187.1 Protein Homology CDS 5397 6521 . + 0 ID=cds-OFJ84212.1;Parent=gene-HMPREF2844_02870;Dbxref=NCBI_GP:OFJ84212.1;Name=OFJ84212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256447.1;locus_tag=HMPREF2844_02870;product=transporter;protein_id=OFJ84212.1;transl_table=11 KV808187.1 Genbank gene 6537 7502 . + . ID=gene-HMPREF2844_02875;Name=HMPREF2844_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02875 KV808187.1 Protein Homology CDS 6537 7502 . + 0 ID=cds-OFJ84209.1;Parent=gene-HMPREF2844_02875;Dbxref=NCBI_GP:OFJ84209.1;Name=OFJ84209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713503.1;locus_tag=HMPREF2844_02875;product=putrescine/spermidine ABC transporter permease;protein_id=OFJ84209.1;transl_table=11 KV808187.1 Genbank gene 7502 8389 . + . ID=gene-HMPREF2844_02880;Name=HMPREF2844_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02880 KV808187.1 Protein Homology CDS 7502 8389 . + 0 ID=cds-OFJ84210.1;Parent=gene-HMPREF2844_02880;Dbxref=NCBI_GP:OFJ84210.1;Name=OFJ84210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675707.1;locus_tag=HMPREF2844_02880;product=polyamine ABC transporter permease;protein_id=OFJ84210.1;transl_table=11 KV808187.1 Genbank gene 8520 9815 . + . ID=gene-HMPREF2844_02885;Name=HMPREF2844_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02885 KV808187.1 Protein Homology CDS 8520 9815 . + 0 ID=cds-OFJ84211.1;Parent=gene-HMPREF2844_02885;Dbxref=NCBI_GP:OFJ84211.1;Name=OFJ84211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251145.1;locus_tag=HMPREF2844_02885;product=oxidoreductase;protein_id=OFJ84211.1;transl_table=11 ##sequence-region KV808188.1 1 78938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808188.1 Genbank region 1 78938 . + . ID=KV808188.1:1..78938;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808188.1 Genbank gene 53 1501 . - . ID=gene-HMPREF2844_02890;Name=HMPREF2844_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02890 KV808188.1 Protein Homology CDS 53 1501 . - 0 ID=cds-OFJ84104.1;Parent=gene-HMPREF2844_02890;Dbxref=NCBI_GP:OFJ84104.1;Name=OFJ84104.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269816.1;locus_tag=HMPREF2844_02890;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=OFJ84104.1;transl_table=11 KV808188.1 Genbank gene 1980 3749 . + . ID=gene-HMPREF2844_02895;Name=HMPREF2844_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02895 KV808188.1 Protein Homology CDS 1980 3749 . + 0 ID=cds-OFJ84105.1;Parent=gene-HMPREF2844_02895;Dbxref=NCBI_GP:OFJ84105.1;Name=OFJ84105.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519194.1;locus_tag=HMPREF2844_02895;product=gamma-glutamyltransferase;protein_id=OFJ84105.1;transl_table=11 KV808188.1 Genbank gene 4060 4974 . - . ID=gene-HMPREF2844_02900;Name=HMPREF2844_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02900 KV808188.1 Protein Homology CDS 4060 4974 . - 0 ID=cds-OFJ84106.1;Parent=gene-HMPREF2844_02900;Dbxref=NCBI_GP:OFJ84106.1;Name=OFJ84106.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682358.1;locus_tag=HMPREF2844_02900;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=OFJ84106.1;transl_table=11 KV808188.1 Genbank gene 5544 6548 . + . ID=gene-HMPREF2844_02905;Name=HMPREF2844_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02905 KV808188.1 Protein Homology CDS 5544 6548 . + 0 ID=cds-OFJ84107.1;Parent=gene-HMPREF2844_02905;Dbxref=NCBI_GP:OFJ84107.1;Name=OFJ84107.1;Note=NAD-dependent%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate%3B active during glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766473.1;locus_tag=HMPREF2844_02905;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OFJ84107.1;transl_table=11 KV808188.1 Genbank gene 7058 7732 . - . ID=gene-HMPREF2844_02910;Name=HMPREF2844_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02910 KV808188.1 Protein Homology CDS 7058 7732 . - 0 ID=cds-OFJ84108.1;Parent=gene-HMPREF2844_02910;Dbxref=NCBI_GP:OFJ84108.1;Name=OFJ84108.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519192.1;locus_tag=HMPREF2844_02910;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=OFJ84108.1;transl_table=11 KV808188.1 Genbank gene 7847 8482 . + . ID=gene-HMPREF2844_02915;Name=HMPREF2844_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02915 KV808188.1 Protein Homology CDS 7847 8482 . + 0 ID=cds-OFJ84109.1;Parent=gene-HMPREF2844_02915;Dbxref=NCBI_GP:OFJ84109.1;Name=OFJ84109.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220020.1;locus_tag=HMPREF2844_02915;product=nicotinamidase;protein_id=OFJ84109.1;transl_table=11 KV808188.1 Genbank gene 8519 9499 . + . ID=gene-HMPREF2844_02920;Name=HMPREF2844_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02920 KV808188.1 Protein Homology CDS 8519 9499 . + 0 ID=cds-OFJ84110.1;Parent=gene-HMPREF2844_02920;Dbxref=NCBI_GP:OFJ84110.1;Name=OFJ84110.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779621.1;locus_tag=HMPREF2844_02920;product=lipopolysaccharide heptosyltransferase I;protein_id=OFJ84110.1;transl_table=11 KV808188.1 Genbank gene 9712 10461 . + . ID=gene-HMPREF2844_02925;Name=HMPREF2844_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02925 KV808188.1 Protein Homology CDS 9712 10461 . + 0 ID=cds-OFJ84111.1;Parent=gene-HMPREF2844_02925;Dbxref=NCBI_GP:OFJ84111.1;Name=OFJ84111.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519189.1;locus_tag=HMPREF2844_02925;product=EtfB protein;protein_id=OFJ84111.1;transl_table=11 KV808188.1 Genbank gene 10472 11407 . + . ID=gene-HMPREF2844_02930;Name=HMPREF2844_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02930 KV808188.1 Protein Homology CDS 10472 11407 . + 0 ID=cds-OFJ84112.1;Parent=gene-HMPREF2844_02930;Dbxref=NCBI_GP:OFJ84112.1;Name=OFJ84112.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002249544.1;locus_tag=HMPREF2844_02930;product=electron transfer flavoprotein subunit beta;protein_id=OFJ84112.1;transl_table=11 KV808188.1 Genbank gene 11470 12081 . + . ID=gene-HMPREF2844_02935;Name=HMPREF2844_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02935 KV808188.1 Protein Homology CDS 11470 12081 . + 0 ID=cds-OFJ84113.1;Parent=gene-HMPREF2844_02935;Dbxref=NCBI_GP:OFJ84113.1;Name=OFJ84113.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224205.1;locus_tag=HMPREF2844_02935;product=thymidylate synthase;protein_id=OFJ84113.1;transl_table=11 KV808188.1 Genbank gene 12133 12450 . - . ID=gene-HMPREF2844_02940;Name=HMPREF2844_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02940 KV808188.1 Protein Homology CDS 12133 12450 . - 0 ID=cds-OFJ84114.1;Parent=gene-HMPREF2844_02940;Dbxref=NCBI_GP:OFJ84114.1;Name=OFJ84114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270242.1;locus_tag=HMPREF2844_02940;product=hypothetical protein;protein_id=OFJ84114.1;transl_table=11 KV808188.1 Genbank gene 12608 13879 . + . ID=gene-HMPREF2844_02945;Name=HMPREF2844_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02945 KV808188.1 Protein Homology CDS 12608 13879 . + 0 ID=cds-OFJ84115.1;Parent=gene-HMPREF2844_02945;Dbxref=NCBI_GP:OFJ84115.1;Name=OFJ84115.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012222175.1;locus_tag=HMPREF2844_02945;product=phosphoribosylamine--glycine ligase;protein_id=OFJ84115.1;transl_table=11 KV808188.1 Genbank gene 13935 14504 . + . ID=gene-HMPREF2844_02950;Name=HMPREF2844_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02950 KV808188.1 Protein Homology CDS 13935 14504 . + 0 ID=cds-OFJ84132.1;Parent=gene-HMPREF2844_02950;Dbxref=NCBI_GP:OFJ84132.1;Name=OFJ84132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312572.1;locus_tag=HMPREF2844_02950;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=OFJ84132.1;transl_table=11 KV808188.1 Genbank gene 14697 15143 . - . ID=gene-HMPREF2844_02955;Name=HMPREF2844_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02955 KV808188.1 Protein Homology CDS 14697 15143 . - 0 ID=cds-OFJ84116.1;Parent=gene-HMPREF2844_02955;Dbxref=NCBI_GP:OFJ84116.1;Name=OFJ84116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769219.1;locus_tag=HMPREF2844_02955;product=hypothetical protein;protein_id=OFJ84116.1;transl_table=11 KV808188.1 Genbank gene 15528 17840 . + . ID=gene-HMPREF2844_02960;Name=HMPREF2844_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02960 KV808188.1 Protein Homology CDS 15528 17840 . + 0 ID=cds-OFJ84117.1;Parent=gene-HMPREF2844_02960;Dbxref=NCBI_GP:OFJ84117.1;Name=OFJ84117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581744.1;locus_tag=HMPREF2844_02960;product=ATP-dependent DNA helicase RecQ;protein_id=OFJ84117.1;transl_table=11 KV808188.1 Genbank gene 18018 18473 . + . ID=gene-HMPREF2844_02965;Name=HMPREF2844_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02965 KV808188.1 Protein Homology CDS 18018 18473 . + 0 ID=cds-OFJ84118.1;Parent=gene-HMPREF2844_02965;Dbxref=NCBI_GP:OFJ84118.1;Name=OFJ84118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741883.1;locus_tag=HMPREF2844_02965;product=hypothetical protein;protein_id=OFJ84118.1;transl_table=11 KV808188.1 Genbank gene 18555 18866 . + . ID=gene-HMPREF2844_02970;Name=HMPREF2844_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02970 KV808188.1 Protein Homology CDS 18555 18866 . + 0 ID=cds-OFJ84119.1;Parent=gene-HMPREF2844_02970;Dbxref=NCBI_GP:OFJ84119.1;Name=OFJ84119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688122.1;locus_tag=HMPREF2844_02970;product=hypothetical protein;protein_id=OFJ84119.1;transl_table=11 KV808188.1 Genbank gene 18974 19816 . + . ID=gene-HMPREF2844_02975;Name=HMPREF2844_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02975 KV808188.1 Protein Homology CDS 18974 19816 . + 0 ID=cds-OFJ84120.1;Parent=gene-HMPREF2844_02975;Dbxref=NCBI_GP:OFJ84120.1;Name=OFJ84120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582340.1;locus_tag=HMPREF2844_02975;product=hypothetical protein;protein_id=OFJ84120.1;transl_table=11 KV808188.1 Genbank gene 19806 20492 . + . ID=gene-HMPREF2844_02980;Name=HMPREF2844_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02980 KV808188.1 Protein Homology CDS 19806 20492 . + 0 ID=cds-OFJ84121.1;Parent=gene-HMPREF2844_02980;Dbxref=NCBI_GP:OFJ84121.1;Name=OFJ84121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686698.1;locus_tag=HMPREF2844_02980;product=hypothetical protein;protein_id=OFJ84121.1;transl_table=11 KV808188.1 Genbank gene 20635 22068 . - . ID=gene-HMPREF2844_02985;Name=HMPREF2844_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02985 KV808188.1 Protein Homology CDS 20635 22068 . - 0 ID=cds-OFJ84122.1;Parent=gene-HMPREF2844_02985;Dbxref=NCBI_GP:OFJ84122.1;Name=OFJ84122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O30391.1;locus_tag=HMPREF2844_02985;product=signal recognition particle-docking protein FtsY;protein_id=OFJ84122.1;transl_table=11 KV808188.1 Genbank gene 22214 23782 . + . ID=gene-HMPREF2844_02990;Name=HMPREF2844_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02990 KV808188.1 Protein Homology CDS 22214 23782 . + 0 ID=cds-OFJ84123.1;Parent=gene-HMPREF2844_02990;Dbxref=NCBI_GP:OFJ84123.1;Name=OFJ84123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678380.1;locus_tag=HMPREF2844_02990;product=trifunctional thioredoxin/methionine sulfoxide reductase A/B protein;protein_id=OFJ84123.1;transl_table=11 KV808188.1 Genbank gene 24074 24862 . - . ID=gene-HMPREF2844_02995;Name=HMPREF2844_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_02995 KV808188.1 Protein Homology CDS 24074 24862 . - 0 ID=cds-OFJ84124.1;Parent=gene-HMPREF2844_02995;Dbxref=NCBI_GP:OFJ84124.1;Name=OFJ84124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741894.1;locus_tag=HMPREF2844_02995;product=methyltransferase;protein_id=OFJ84124.1;transl_table=11 KV808188.1 Genbank gene 25109 25855 . - . ID=gene-HMPREF2844_03000;Name=HMPREF2844_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03000 KV808188.1 Protein Homology CDS 25109 25855 . - 0 ID=cds-OFJ84125.1;Parent=gene-HMPREF2844_03000;Dbxref=NCBI_GP:OFJ84125.1;Name=OFJ84125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767784.1;locus_tag=HMPREF2844_03000;product=pimeloyl-[acyl-carrier protein] methyl ester esterase;protein_id=OFJ84125.1;transl_table=11 KV808188.1 Genbank gene 26109 26606 . + . ID=gene-HMPREF2844_03005;Name=HMPREF2844_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03005 KV808188.1 Protein Homology CDS 26109 26606 . + 0 ID=cds-OFJ84126.1;Parent=gene-HMPREF2844_03005;Dbxref=NCBI_GP:OFJ84126.1;Name=OFJ84126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237575.1;locus_tag=HMPREF2844_03005;product=competence protein;protein_id=OFJ84126.1;transl_table=11 KV808188.1 Genbank gene 26671 27135 . + . ID=gene-HMPREF2844_03010;Name=HMPREF2844_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03010 KV808188.1 Protein Homology CDS 26671 27135 . + 0 ID=cds-OFJ84133.1;Parent=gene-HMPREF2844_03010;Dbxref=NCBI_GP:OFJ84133.1;Name=OFJ84133.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007341872.1;locus_tag=HMPREF2844_03010;product=tRNA (cytosine(34)-2'-O)-methyltransferase TrmL;protein_id=OFJ84133.1;transl_table=11 KV808188.1 Genbank gene 27286 28011 . + . ID=gene-HMPREF2844_03015;Name=HMPREF2844_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03015 KV808188.1 Protein Homology CDS 27286 28011 . + 0 ID=cds-OFJ84127.1;Parent=gene-HMPREF2844_03015;Dbxref=NCBI_GP:OFJ84127.1;Name=OFJ84127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767781.1;locus_tag=HMPREF2844_03015;product=hypothetical protein;protein_id=OFJ84127.1;transl_table=11 KV808188.1 Genbank gene 28298 28630 . + . ID=gene-HMPREF2844_03020;Name=HMPREF2844_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03020 KV808188.1 Protein Homology CDS 28298 28630 . + 0 ID=cds-OFJ84128.1;Parent=gene-HMPREF2844_03020;Dbxref=NCBI_GP:OFJ84128.1;Name=OFJ84128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270833.1;locus_tag=HMPREF2844_03020;product=alkylphosphonate utilization protein;protein_id=OFJ84128.1;transl_table=11 KV808188.1 Genbank gene 28795 29313 . - . ID=gene-HMPREF2844_03025;Name=HMPREF2844_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03025 KV808188.1 Protein Homology CDS 28795 29313 . - 0 ID=cds-OFJ84129.1;Parent=gene-HMPREF2844_03025;Dbxref=NCBI_GP:OFJ84129.1;Name=OFJ84129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675606.1;locus_tag=HMPREF2844_03025;product=cytochrome C;protein_id=OFJ84129.1;transl_table=11 KV808188.1 Genbank gene 29915 30505 . - . ID=gene-HMPREF2844_03030;Name=HMPREF2844_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03030 KV808188.1 Protein Homology CDS 29915 30505 . - 0 ID=cds-OFJ84130.1;Parent=gene-HMPREF2844_03030;Dbxref=NCBI_GP:OFJ84130.1;Name=OFJ84130.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686853.1;locus_tag=HMPREF2844_03030;product=RNA polymerase subunit sigma;protein_id=OFJ84130.1;transl_table=11 KV808188.1 Genbank gene 30710 30976 . + . ID=gene-HMPREF2844_03035;Name=HMPREF2844_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03035 KV808188.1 Protein Homology CDS 30710 30976 . + 0 ID=cds-OFJ84131.1;Parent=gene-HMPREF2844_03035;Dbxref=NCBI_GP:OFJ84131.1;Name=OFJ84131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753663.1;locus_tag=HMPREF2844_03035;product=hypothetical protein;protein_id=OFJ84131.1;transl_table=11 KV808188.1 Genbank gene 31630 33780 . + . ID=gene-HMPREF2844_03040;Name=HMPREF2844_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03040 KV808188.1 Protein Homology CDS 31630 33780 . + 0 ID=cds-OFJ84037.1;Parent=gene-HMPREF2844_03040;Dbxref=NCBI_GP:OFJ84037.1;Name=OFJ84037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815907.1;locus_tag=HMPREF2844_03040;product=ATP-dependent DNA helicase DinG;protein_id=OFJ84037.1;transl_table=11 KV808188.1 Genbank gene 33849 35618 . - . ID=gene-HMPREF2844_03045;Name=HMPREF2844_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03045 KV808188.1 Protein Homology CDS 33849 35618 . - 0 ID=cds-OFJ84038.1;Parent=gene-HMPREF2844_03045;Dbxref=NCBI_GP:OFJ84038.1;Name=OFJ84038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755912.1;locus_tag=HMPREF2844_03045;product=acyl-CoA dehydrogenase;protein_id=OFJ84038.1;transl_table=11 KV808188.1 Genbank gene 36064 37926 . + . ID=gene-HMPREF2844_03050;Name=HMPREF2844_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03050 KV808188.1 Protein Homology CDS 36064 37926 . + 0 ID=cds-OFJ84039.1;Parent=gene-HMPREF2844_03050;Dbxref=NCBI_GP:OFJ84039.1;Name=OFJ84039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776102.1;locus_tag=HMPREF2844_03050;product=ribonuclease II;protein_id=OFJ84039.1;transl_table=11 KV808188.1 Genbank gene 38021 38887 . - . ID=gene-HMPREF2844_03055;Name=HMPREF2844_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03055 KV808188.1 Protein Homology CDS 38021 38887 . - 0 ID=cds-OFJ84040.1;Parent=gene-HMPREF2844_03055;Dbxref=NCBI_GP:OFJ84040.1;Name=OFJ84040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270825.1;locus_tag=HMPREF2844_03055;product=ribosome small subunit-dependent GTPase;protein_id=OFJ84040.1;transl_table=11 KV808188.1 Genbank gene 39111 39839 . - . ID=gene-HMPREF2844_03060;Name=HMPREF2844_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03060 KV808188.1 Protein Homology CDS 39111 39839 . - 0 ID=cds-OFJ84041.1;Parent=gene-HMPREF2844_03060;Dbxref=NCBI_GP:OFJ84041.1;Name=OFJ84041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686578.1;locus_tag=HMPREF2844_03060;product=Rossman fold protein%2C TIGR00730 family;protein_id=OFJ84041.1;transl_table=11 KV808188.1 Genbank gene 40045 40752 . + . ID=gene-HMPREF2844_03065;Name=HMPREF2844_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03065 KV808188.1 Protein Homology CDS 40045 40752 . + 0 ID=cds-OFJ84042.1;Parent=gene-HMPREF2844_03065;Dbxref=NCBI_GP:OFJ84042.1;Name=OFJ84042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741918.1;locus_tag=HMPREF2844_03065;product=tRNA pseudouridine(65) synthase TruC;protein_id=OFJ84042.1;transl_table=11 KV808188.1 Genbank gene 41094 42464 . - . ID=gene-HMPREF2844_03070;Name=HMPREF2844_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03070 KV808188.1 Protein Homology CDS 41094 42464 . - 0 ID=cds-OFJ84043.1;Parent=gene-HMPREF2844_03070;Dbxref=NCBI_GP:OFJ84043.1;Name=OFJ84043.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245843.1;locus_tag=HMPREF2844_03070;product=adenylosuccinate lyase;protein_id=OFJ84043.1;transl_table=11 KV808188.1 Genbank gene 42565 43158 . - . ID=gene-HMPREF2844_03075;Name=HMPREF2844_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03075 KV808188.1 Protein Homology CDS 42565 43158 . - 0 ID=cds-OFJ84044.1;Parent=gene-HMPREF2844_03075;Dbxref=NCBI_GP:OFJ84044.1;Name=OFJ84044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686871.1;locus_tag=HMPREF2844_03075;product=SanA protein;protein_id=OFJ84044.1;transl_table=11 KV808188.1 Genbank gene 43578 43961 . - . ID=gene-HMPREF2844_03080;Name=HMPREF2844_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03080 KV808188.1 Protein Homology CDS 43578 43961 . - 0 ID=cds-OFJ84045.1;Parent=gene-HMPREF2844_03080;Dbxref=NCBI_GP:OFJ84045.1;Name=OFJ84045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741924.1;locus_tag=HMPREF2844_03080;product=hypothetical protein;protein_id=OFJ84045.1;transl_table=11 KV808188.1 Genbank gene 44163 45386 . - . ID=gene-HMPREF2844_03085;Name=HMPREF2844_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03085 KV808188.1 Protein Homology CDS 44163 45386 . - 0 ID=cds-OFJ84046.1;Parent=gene-HMPREF2844_03085;Dbxref=NCBI_GP:OFJ84046.1;Name=OFJ84046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755708.1;locus_tag=HMPREF2844_03085;product=serine/threonine transporter SstT;protein_id=OFJ84046.1;transl_table=11 KV808188.1 Genbank gene 45686 47524 . + . ID=gene-HMPREF2844_03090;Name=HMPREF2844_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03090 KV808188.1 Protein Homology CDS 45686 47524 . + 0 ID=cds-OFJ84047.1;Parent=gene-HMPREF2844_03090;Dbxref=NCBI_GP:OFJ84047.1;Name=OFJ84047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677025.1;locus_tag=HMPREF2844_03090;product=hypothetical protein;protein_id=OFJ84047.1;transl_table=11 KV808188.1 Genbank gene 47614 48459 . + . ID=gene-HMPREF2844_03095;Name=HMPREF2844_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03095 KV808188.1 Protein Homology CDS 47614 48459 . + 0 ID=cds-OFJ84048.1;Parent=gene-HMPREF2844_03095;Dbxref=NCBI_GP:OFJ84048.1;Name=OFJ84048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761028.1;locus_tag=HMPREF2844_03095;product=transporter;protein_id=OFJ84048.1;transl_table=11 KV808188.1 Genbank gene 48641 49135 . + . ID=gene-HMPREF2844_03100;Name=HMPREF2844_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03100 KV808188.1 Protein Homology CDS 48641 49135 . + 0 ID=cds-OFJ84049.1;Parent=gene-HMPREF2844_03100;Dbxref=NCBI_GP:OFJ84049.1;Name=OFJ84049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008685871.1;locus_tag=HMPREF2844_03100;product=PduO protein;protein_id=OFJ84049.1;transl_table=11 KV808188.1 Genbank gene 49476 53684 . + . ID=gene-HMPREF2844_03105;Name=HMPREF2844_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03105 KV808188.1 Protein Homology CDS 49476 53684 . + 0 ID=cds-OFJ84050.1;Parent=gene-HMPREF2844_03105;Dbxref=NCBI_GP:OFJ84050.1;Name=OFJ84050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312457.1;locus_tag=HMPREF2844_03105;product=hypothetical protein;protein_id=OFJ84050.1;transl_table=11 KV808188.1 Genbank gene 53774 54391 . - . ID=gene-HMPREF2844_03110;Name=HMPREF2844_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03110 KV808188.1 Protein Homology CDS 53774 54391 . - 0 ID=cds-OFJ84051.1;Parent=gene-HMPREF2844_03110;Dbxref=NCBI_GP:OFJ84051.1;Name=OFJ84051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003700499.1;locus_tag=HMPREF2844_03110;product=3-hydroxyisobutyrate dehydrogenase;protein_id=OFJ84051.1;transl_table=11 KV808188.1 Genbank gene 54750 55106 . + . ID=gene-HMPREF2844_03115;Name=HMPREF2844_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03115 KV808188.1 Protein Homology CDS 54750 55106 . + 0 ID=cds-OFJ84052.1;Parent=gene-HMPREF2844_03115;Dbxref=NCBI_GP:OFJ84052.1;Name=OFJ84052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002642681.1;locus_tag=HMPREF2844_03115;product=NADH-quinone oxidoreductase subunit A;protein_id=OFJ84052.1;transl_table=11 KV808188.1 Genbank gene 55097 55579 . + . ID=gene-HMPREF2844_03120;Name=HMPREF2844_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03120 KV808188.1 Protein Homology CDS 55097 55579 . + 0 ID=cds-OFJ84053.1;Parent=gene-HMPREF2844_03120;Dbxref=NCBI_GP:OFJ84053.1;Name=OFJ84053.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F616.1;locus_tag=HMPREF2844_03120;product=NADH dehydrogenase;protein_id=OFJ84053.1;transl_table=11 KV808188.1 Genbank gene 55593 56186 . + . ID=gene-HMPREF2844_03125;Name=HMPREF2844_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03125 KV808188.1 Protein Homology CDS 55593 56186 . + 0 ID=cds-OFJ84054.1;Parent=gene-HMPREF2844_03125;Dbxref=NCBI_GP:OFJ84054.1;Name=OFJ84054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239488.1;locus_tag=HMPREF2844_03125;product=NADH dehydrogenase;protein_id=OFJ84054.1;transl_table=11 KV808188.1 Genbank gene 56176 57432 . + . ID=gene-HMPREF2844_03130;Name=HMPREF2844_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03130 KV808188.1 Protein Homology CDS 56176 57432 . + 0 ID=cds-OFJ84055.1;Parent=gene-HMPREF2844_03130;Dbxref=NCBI_GP:OFJ84055.1;Name=OFJ84055.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573729.1;locus_tag=HMPREF2844_03130;product=NADH dehydrogenase;protein_id=OFJ84055.1;transl_table=11 KV808188.1 Genbank gene 57432 57905 . + . ID=gene-HMPREF2844_03135;Name=HMPREF2844_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03135 KV808188.1 Protein Homology CDS 57432 57905 . + 0 ID=cds-OFJ84056.1;Parent=gene-HMPREF2844_03135;Dbxref=NCBI_GP:OFJ84056.1;Name=OFJ84056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215615.1;locus_tag=HMPREF2844_03135;product=NADH dehydrogenase;protein_id=OFJ84056.1;transl_table=11 KV808188.1 Genbank gene 57959 58354 . + . ID=gene-HMPREF2844_03140;Name=HMPREF2844_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03140 KV808188.1 GeneMarkS+ CDS 57959 58354 . + 0 ID=cds-OFJ84057.1;Parent=gene-HMPREF2844_03140;Dbxref=NCBI_GP:OFJ84057.1;Name=OFJ84057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_03140;product=hypothetical protein;protein_id=OFJ84057.1;transl_table=11 KV808188.1 Genbank gene 58461 59756 . + . ID=gene-HMPREF2844_03145;Name=HMPREF2844_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03145 KV808188.1 Protein Homology CDS 58461 59756 . + 0 ID=cds-OFJ84058.1;Parent=gene-HMPREF2844_03145;Dbxref=NCBI_GP:OFJ84058.1;Name=OFJ84058.1;Note=part of NADH-ubiquinone oxidoreductase complex I%3B shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822945.1;locus_tag=HMPREF2844_03145;product=NADH-quinone oxidoreductase subunit F;protein_id=OFJ84058.1;transl_table=11 KV808188.1 Genbank gene 59941 60297 . + . ID=gene-HMPREF2844_03150;Name=HMPREF2844_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03150 KV808188.1 Protein Homology CDS 59941 60297 . + 0 ID=cds-OFJ84059.1;Parent=gene-HMPREF2844_03150;Dbxref=NCBI_GP:OFJ84059.1;Name=OFJ84059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759419.1;locus_tag=HMPREF2844_03150;product=endonuclease;protein_id=OFJ84059.1;transl_table=11 KV808188.1 Genbank gene 60666 62927 . + . ID=gene-HMPREF2844_03155;Name=HMPREF2844_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03155 KV808188.1 Protein Homology CDS 60666 62927 . + 0 ID=cds-OFJ84060.1;Parent=gene-HMPREF2844_03155;Dbxref=NCBI_GP:OFJ84060.1;Name=OFJ84060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776117.1;locus_tag=HMPREF2844_03155;product=NADH dehydrogenase;protein_id=OFJ84060.1;transl_table=11 KV808188.1 Genbank gene 62930 64006 . + . ID=gene-HMPREF2844_03160;Name=HMPREF2844_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03160 KV808188.1 Protein Homology CDS 62930 64006 . + 0 ID=cds-OFJ84061.1;Parent=gene-HMPREF2844_03160;Dbxref=NCBI_GP:OFJ84061.1;Name=OFJ84061.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272039.1;locus_tag=HMPREF2844_03160;product=NADH:ubiquinone oxidoreductase subunit H;protein_id=OFJ84061.1;transl_table=11 KV808188.1 Genbank gene 64086 64565 . + . ID=gene-HMPREF2844_03165;Name=HMPREF2844_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03165 KV808188.1 Protein Homology CDS 64086 64565 . + 0 ID=cds-OFJ84062.1;Parent=gene-HMPREF2844_03165;Dbxref=NCBI_GP:OFJ84062.1;Name=OFJ84062.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F623.1;locus_tag=HMPREF2844_03165;product=NADH-quinone oxidoreductase subunit I;protein_id=OFJ84062.1;transl_table=11 KV808188.1 Genbank gene 64577 65248 . + . ID=gene-HMPREF2844_03170;Name=HMPREF2844_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03170 KV808188.1 Protein Homology CDS 64577 65248 . + 0 ID=cds-OFJ84063.1;Parent=gene-HMPREF2844_03170;Dbxref=NCBI_GP:OFJ84063.1;Name=OFJ84063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750564.1;locus_tag=HMPREF2844_03170;product=NADH:ubiquinone oxidoreductase subunit J;protein_id=OFJ84063.1;transl_table=11 KV808188.1 Genbank gene 65245 65550 . + . ID=gene-HMPREF2844_03175;Name=HMPREF2844_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03175 KV808188.1 Protein Homology CDS 65245 65550 . + 0 ID=cds-OFJ84064.1;Parent=gene-HMPREF2844_03175;Dbxref=NCBI_GP:OFJ84064.1;Name=OFJ84064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003787972.1;locus_tag=HMPREF2844_03175;product=NADH-quinone oxidoreductase subunit K;protein_id=OFJ84064.1;transl_table=11 KV808188.1 Genbank gene 65556 66092 . + . ID=gene-HMPREF2844_03180;Name=HMPREF2844_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03180 KV808188.1 Protein Homology CDS 65556 66092 . + 0 ID=cds-OFJ84065.1;Parent=gene-HMPREF2844_03180;Dbxref=NCBI_GP:OFJ84065.1;Name=OFJ84065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270803.1;locus_tag=HMPREF2844_03180;product=hypothetical protein;protein_id=OFJ84065.1;transl_table=11 KV808188.1 Genbank gene 66269 68293 . + . ID=gene-HMPREF2844_03185;Name=HMPREF2844_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03185 KV808188.1 Protein Homology CDS 66269 68293 . + 0 ID=cds-OFJ84066.1;Parent=gene-HMPREF2844_03185;Dbxref=NCBI_GP:OFJ84066.1;Name=OFJ84066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573734.1;locus_tag=HMPREF2844_03185;product=NADH-quinone oxidoreductase subunit L;protein_id=OFJ84066.1;transl_table=11 KV808188.1 Genbank gene 68512 68832 . + . ID=gene-HMPREF2844_03190;Name=HMPREF2844_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03190 KV808188.1 Protein Homology CDS 68512 68832 . + 0 ID=cds-OFJ84067.1;Parent=gene-HMPREF2844_03190;Dbxref=NCBI_GP:OFJ84067.1;Name=OFJ84067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175032.1;locus_tag=HMPREF2844_03190;product=cupin;protein_id=OFJ84067.1;transl_table=11 KV808188.1 Genbank gene 68936 70150 . + . ID=gene-HMPREF2844_03195;Name=HMPREF2844_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03195 KV808188.1 Protein Homology CDS 68936 70150 . + 0 ID=cds-OFJ84068.1;Parent=gene-HMPREF2844_03195;Dbxref=NCBI_GP:OFJ84068.1;Name=OFJ84068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718709.1;locus_tag=HMPREF2844_03195;product=cytochrome C nitrite reductase;protein_id=OFJ84068.1;transl_table=11 KV808188.1 Genbank pseudogene 70150 70371 . + . ID=gene-HMPREF2844_03200;Name=HMPREF2844_03200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_03200;pseudo=true KV808188.1 Protein Homology CDS 70150 70371 . + 0 ID=cds-HMPREF2844_03200;Parent=gene-HMPREF2844_03200;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010359271.1;locus_tag=HMPREF2844_03200;product=hypothetical protein;pseudo=true;transl_table=11 KV808188.1 Genbank gene 70405 70611 . + . ID=gene-HMPREF2844_03205;Name=HMPREF2844_03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03205 KV808188.1 Protein Homology CDS 70405 70611 . + 0 ID=cds-OFJ84076.1;Parent=gene-HMPREF2844_03205;Dbxref=NCBI_GP:OFJ84076.1;Name=OFJ84076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010359270.1;locus_tag=HMPREF2844_03205;product=hypothetical protein;protein_id=OFJ84076.1;transl_table=11 KV808188.1 Genbank gene 70720 72216 . + . ID=gene-HMPREF2844_03210;Name=HMPREF2844_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03210 KV808188.1 Protein Homology CDS 70720 72216 . + 0 ID=cds-OFJ84069.1;Parent=gene-HMPREF2844_03210;Dbxref=NCBI_GP:OFJ84069.1;Name=OFJ84069.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449632.1;locus_tag=HMPREF2844_03210;product=NADH:ubiquinone oxidoreductase subunit M;protein_id=OFJ84069.1;transl_table=11 KV808188.1 Genbank gene 72226 73701 . + . ID=gene-HMPREF2844_03215;Name=HMPREF2844_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03215 KV808188.1 Protein Homology CDS 72226 73701 . + 0 ID=cds-OFJ84070.1;Parent=gene-HMPREF2844_03215;Dbxref=NCBI_GP:OFJ84070.1;Name=OFJ84070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681689.1;locus_tag=HMPREF2844_03215;product=NADH:ubiquinone oxidoreductase subunit N;protein_id=OFJ84070.1;transl_table=11 KV808188.1 Genbank gene 73829 74128 . + . ID=gene-HMPREF2844_03220;Name=HMPREF2844_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03220 KV808188.1 Protein Homology CDS 73829 74128 . + 0 ID=cds-OFJ84071.1;Parent=gene-HMPREF2844_03220;Dbxref=NCBI_GP:OFJ84071.1;Name=OFJ84071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002259571.1;locus_tag=HMPREF2844_03220;product=hypothetical protein;protein_id=OFJ84071.1;transl_table=11 KV808188.1 Genbank gene 74183 75307 . + . ID=gene-HMPREF2844_03225;Name=HMPREF2844_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03225 KV808188.1 Protein Homology CDS 74183 75307 . + 0 ID=cds-OFJ84072.1;Parent=gene-HMPREF2844_03225;Dbxref=NCBI_GP:OFJ84072.1;Name=OFJ84072.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285766.1;locus_tag=HMPREF2844_03225;product=glutamate 5-kinase;protein_id=OFJ84072.1;transl_table=11 KV808188.1 Genbank gene 75844 77127 . + . ID=gene-HMPREF2844_03230;Name=HMPREF2844_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03230 KV808188.1 Protein Homology CDS 75844 77127 . + 0 ID=cds-OFJ84073.1;Parent=gene-HMPREF2844_03230;Dbxref=NCBI_GP:OFJ84073.1;Name=OFJ84073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686898.1;locus_tag=HMPREF2844_03230;product=deoxyribodipyrimidine photolyase;protein_id=OFJ84073.1;transl_table=11 KV808188.1 Genbank gene 77251 78396 . + . ID=gene-HMPREF2844_03235;Name=HMPREF2844_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03235 KV808188.1 Protein Homology CDS 77251 78396 . + 0 ID=cds-OFJ84074.1;Parent=gene-HMPREF2844_03235;Dbxref=NCBI_GP:OFJ84074.1;Name=OFJ84074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741970.1;locus_tag=HMPREF2844_03235;product=hypothetical protein;protein_id=OFJ84074.1;transl_table=11 KV808188.1 Genbank gene 78451 78900 . + . ID=gene-HMPREF2844_03240;Name=HMPREF2844_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03240 KV808188.1 Protein Homology CDS 78451 78900 . + 0 ID=cds-OFJ84075.1;Parent=gene-HMPREF2844_03240;Dbxref=NCBI_GP:OFJ84075.1;Name=OFJ84075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221764.1;locus_tag=HMPREF2844_03240;product=hypothetical protein;protein_id=OFJ84075.1;transl_table=11 ##sequence-region KV808189.1 1 25576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808189.1 Genbank region 1 25576 . + . ID=KV808189.1:1..25576;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808189.1 Genbank gene 61 1773 . + . ID=gene-HMPREF2844_03245;Name=HMPREF2844_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03245 KV808189.1 Protein Homology CDS 61 1773 . + 0 ID=cds-OFJ84016.1;Parent=gene-HMPREF2844_03245;Dbxref=NCBI_GP:OFJ84016.1;Name=OFJ84016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766093.1;locus_tag=HMPREF2844_03245;product=ABC transporter ATP-binding protein;protein_id=OFJ84016.1;transl_table=11 KV808189.1 Genbank gene 2121 2897 . - . ID=gene-HMPREF2844_03250;Name=HMPREF2844_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03250 KV808189.1 Protein Homology CDS 2121 2897 . - 0 ID=cds-OFJ84001.1;Parent=gene-HMPREF2844_03250;Dbxref=NCBI_GP:OFJ84001.1;Name=OFJ84001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520637.1;locus_tag=HMPREF2844_03250;product=GntR family transcriptional regulator;protein_id=OFJ84001.1;transl_table=11 KV808189.1 Genbank gene 3293 4936 . + . ID=gene-HMPREF2844_03255;Name=HMPREF2844_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03255 KV808189.1 Protein Homology CDS 3293 4936 . + 0 ID=cds-OFJ84002.1;Parent=gene-HMPREF2844_03255;Dbxref=NCBI_GP:OFJ84002.1;Name=OFJ84002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311098.1;locus_tag=HMPREF2844_03255;product=L-lactate permease;protein_id=OFJ84002.1;transl_table=11 KV808189.1 Genbank gene 5478 8081 . + . ID=gene-HMPREF2844_03260;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=HMPREF2844_03260 KV808189.1 Protein Homology CDS 5478 8081 . + 0 ID=cds-OFJ84003.1;Parent=gene-HMPREF2844_03260;Dbxref=NCBI_GP:OFJ84003.1;Name=OFJ84003.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688050.1;locus_tag=HMPREF2844_03260;product=aminopeptidase N;protein_id=OFJ84003.1;transl_table=11 KV808189.1 Genbank gene 8354 8989 . - . ID=gene-HMPREF2844_03265;Name=HMPREF2844_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03265 KV808189.1 Protein Homology CDS 8354 8989 . - 0 ID=cds-OFJ84004.1;Parent=gene-HMPREF2844_03265;Dbxref=NCBI_GP:OFJ84004.1;Name=OFJ84004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270363.1;locus_tag=HMPREF2844_03265;product=transcriptional regulator;protein_id=OFJ84004.1;transl_table=11 KV808189.1 Genbank gene 9229 10518 . + . ID=gene-HMPREF2844_03270;Name=HMPREF2844_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03270 KV808189.1 Protein Homology CDS 9229 10518 . + 0 ID=cds-OFJ84005.1;Parent=gene-HMPREF2844_03270;Dbxref=NCBI_GP:OFJ84005.1;Name=OFJ84005.1;Note=MexX%3B AmrA%3B involved in resistance to antibiotics%3B periplasmic membrane fusion protein%3B functions along with MexY and OprM%3B part of an inducible system that appears to respond to interference with the cellular translation machinery;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311020.1;locus_tag=HMPREF2844_03270;product=efflux transporter periplasmic adaptor subunit;protein_id=OFJ84005.1;transl_table=11 KV808189.1 Genbank gene 10530 13742 . + . ID=gene-HMPREF2844_03275;Name=HMPREF2844_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03275 KV808189.1 Protein Homology CDS 10530 13742 . + 0 ID=cds-OFJ84006.1;Parent=gene-HMPREF2844_03275;Dbxref=NCBI_GP:OFJ84006.1;Name=OFJ84006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685220.1;locus_tag=HMPREF2844_03275;product=multidrug efflux RND transporter permease subunit;protein_id=OFJ84006.1;transl_table=11 KV808189.1 Genbank gene 13780 15216 . + . ID=gene-HMPREF2844_03280;Name=HMPREF2844_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03280 KV808189.1 Protein Homology CDS 13780 15216 . + 0 ID=cds-OFJ84007.1;Parent=gene-HMPREF2844_03280;Dbxref=NCBI_GP:OFJ84007.1;Name=OFJ84007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680559.1;locus_tag=HMPREF2844_03280;product=multidrug transporter;protein_id=OFJ84007.1;transl_table=11 KV808189.1 Genbank gene 15686 17764 . - . ID=gene-HMPREF2844_03285;Name=HMPREF2844_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03285 KV808189.1 Protein Homology CDS 15686 17764 . - 0 ID=cds-OFJ84008.1;Parent=gene-HMPREF2844_03285;Dbxref=NCBI_GP:OFJ84008.1;Name=OFJ84008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685128.1;locus_tag=HMPREF2844_03285;product=lytic transglycosylase;protein_id=OFJ84008.1;transl_table=11 KV808189.1 Genbank gene 17959 19251 . + . ID=gene-HMPREF2844_03290;Name=HMPREF2844_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03290 KV808189.1 Protein Homology CDS 17959 19251 . + 0 ID=cds-OFJ84009.1;Parent=gene-HMPREF2844_03290;Dbxref=NCBI_GP:OFJ84009.1;Name=OFJ84009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311217.1;locus_tag=HMPREF2844_03290;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=OFJ84009.1;transl_table=11 KV808189.1 Genbank gene 19248 19916 . + . ID=gene-HMPREF2844_03295;Name=HMPREF2844_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03295 KV808189.1 Protein Homology CDS 19248 19916 . + 0 ID=cds-OFJ84010.1;Parent=gene-HMPREF2844_03295;Dbxref=NCBI_GP:OFJ84010.1;Name=OFJ84010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756068.1;locus_tag=HMPREF2844_03295;product=dethiobiotin synthase;protein_id=OFJ84010.1;transl_table=11 KV808189.1 Genbank gene 19920 20465 . + . ID=gene-HMPREF2844_03300;Name=HMPREF2844_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03300 KV808189.1 Protein Homology CDS 19920 20465 . + 0 ID=cds-OFJ84011.1;Parent=gene-HMPREF2844_03300;Dbxref=NCBI_GP:OFJ84011.1;Name=OFJ84011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741575.1;locus_tag=HMPREF2844_03300;product=chorismate lyase;protein_id=OFJ84011.1;transl_table=11 KV808189.1 Genbank gene 20527 22122 . - . ID=gene-HMPREF2844_03305;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=HMPREF2844_03305 KV808189.1 Protein Homology CDS 20527 22122 . - 0 ID=cds-OFJ84012.1;Parent=gene-HMPREF2844_03305;Dbxref=NCBI_GP:OFJ84012.1;Name=OFJ84012.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342770.1;locus_tag=HMPREF2844_03305;product=peptide chain release factor 3;protein_id=OFJ84012.1;transl_table=11 KV808189.1 Genbank gene 22284 23474 . - . ID=gene-HMPREF2844_03310;Name=HMPREF2844_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03310 KV808189.1 Protein Homology CDS 22284 23474 . - 0 ID=cds-OFJ84013.1;Parent=gene-HMPREF2844_03310;Dbxref=NCBI_GP:OFJ84013.1;Name=OFJ84013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687406.1;locus_tag=HMPREF2844_03310;product=LD-carboxypeptidase;protein_id=OFJ84013.1;transl_table=11 KV808189.1 Genbank gene 23577 23975 . - . ID=gene-HMPREF2844_03315;Name=HMPREF2844_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03315 KV808189.1 Protein Homology CDS 23577 23975 . - 0 ID=cds-OFJ84014.1;Parent=gene-HMPREF2844_03315;Dbxref=NCBI_GP:OFJ84014.1;Name=OFJ84014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741569.1;locus_tag=HMPREF2844_03315;product=HIT domain-containing protein;protein_id=OFJ84014.1;transl_table=11 KV808189.1 Genbank gene 24073 25332 . - . ID=gene-HMPREF2844_03320;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=HMPREF2844_03320 KV808189.1 Protein Homology CDS 24073 25332 . - 0 ID=cds-OFJ84015.1;Parent=gene-HMPREF2844_03320;Dbxref=NCBI_GP:OFJ84015.1;Name=OFJ84015.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823056.1;locus_tag=HMPREF2844_03320;product=transcription termination factor Rho;protein_id=OFJ84015.1;transl_table=11 ##sequence-region KV808190.1 1 37511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808190.1 Genbank region 1 37511 . + . ID=KV808190.1:1..37511;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808190.1 Genbank gene 93 1535 . - . ID=gene-HMPREF2844_03325;Name=HMPREF2844_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03325 KV808190.1 Protein Homology CDS 93 1535 . - 0 ID=cds-OFJ83943.1;Parent=gene-HMPREF2844_03325;Dbxref=NCBI_GP:OFJ83943.1;Name=OFJ83943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744550.1;locus_tag=HMPREF2844_03325;product=peptidase S13;protein_id=OFJ83943.1;transl_table=11 KV808190.1 Genbank gene 2010 3089 . + . ID=gene-HMPREF2844_03330;Name=HMPREF2844_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03330 KV808190.1 Protein Homology CDS 2010 3089 . + 0 ID=cds-OFJ83944.1;Parent=gene-HMPREF2844_03330;Dbxref=NCBI_GP:OFJ83944.1;Name=OFJ83944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688193.1;locus_tag=HMPREF2844_03330;product=histidinol-phosphate aminotransferase;protein_id=OFJ83944.1;transl_table=11 KV808190.1 Genbank gene 3120 4103 . + . ID=gene-HMPREF2844_03335;Name=HMPREF2844_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03335 KV808190.1 Protein Homology CDS 3120 4103 . + 0 ID=cds-OFJ83945.1;Parent=gene-HMPREF2844_03335;Dbxref=NCBI_GP:OFJ83945.1;Name=OFJ83945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269826.1;locus_tag=HMPREF2844_03335;product=imidazoleglycerol-phosphate dehydratase;protein_id=OFJ83945.1;transl_table=11 KV808190.1 Genbank gene 4505 5980 . - . ID=gene-HMPREF2844_03340;Name=HMPREF2844_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03340 KV808190.1 Protein Homology CDS 4505 5980 . - 0 ID=cds-OFJ83946.1;Parent=gene-HMPREF2844_03340;Dbxref=NCBI_GP:OFJ83946.1;Name=OFJ83946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312357.1;locus_tag=HMPREF2844_03340;product=ABC transporter substrate-binding protein;protein_id=OFJ83946.1;transl_table=11 KV808190.1 Genbank gene 6297 8393 . - . ID=gene-HMPREF2844_03345;Name=HMPREF2844_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03345 KV808190.1 Protein Homology CDS 6297 8393 . - 0 ID=cds-OFJ83947.1;Parent=gene-HMPREF2844_03345;Dbxref=NCBI_GP:OFJ83947.1;Name=OFJ83947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519985.1;locus_tag=HMPREF2844_03345;product=TonB-dependent receptor;protein_id=OFJ83947.1;transl_table=11 KV808190.1 Genbank gene 8781 9203 . - . ID=gene-HMPREF2844_03350;Name=HMPREF2844_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03350 KV808190.1 Protein Homology CDS 8781 9203 . - 0 ID=cds-OFJ83948.1;Parent=gene-HMPREF2844_03350;Dbxref=NCBI_GP:OFJ83948.1;Name=OFJ83948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573802.1;locus_tag=HMPREF2844_03350;product=hypothetical protein;protein_id=OFJ83948.1;transl_table=11 KV808190.1 Genbank gene 9205 10008 . - . ID=gene-HMPREF2844_03355;Name=HMPREF2844_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03355 KV808190.1 Protein Homology CDS 9205 10008 . - 0 ID=cds-OFJ83949.1;Parent=gene-HMPREF2844_03355;Dbxref=NCBI_GP:OFJ83949.1;Name=OFJ83949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269830.1;locus_tag=HMPREF2844_03355;product=NTP pyrophosphohydrolase;protein_id=OFJ83949.1;transl_table=11 KV808190.1 Genbank gene 10084 10461 . - . ID=gene-HMPREF2844_03360;Name=HMPREF2844_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03360 KV808190.1 Protein Homology CDS 10084 10461 . - 0 ID=cds-OFJ83950.1;Parent=gene-HMPREF2844_03360;Dbxref=NCBI_GP:OFJ83950.1;Name=OFJ83950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273255.1;locus_tag=HMPREF2844_03360;product=holo-ACP synthase;protein_id=OFJ83950.1;transl_table=11 KV808190.1 Genbank gene 10513 11241 . - . ID=gene-HMPREF2844_03365;Name=HMPREF2844_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03365 KV808190.1 Protein Homology CDS 10513 11241 . - 0 ID=cds-OFJ83951.1;Parent=gene-HMPREF2844_03365;Dbxref=NCBI_GP:OFJ83951.1;Name=OFJ83951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269831.1;locus_tag=HMPREF2844_03365;product=pyridoxine 5'-phosphate synthase;protein_id=OFJ83951.1;transl_table=11 KV808190.1 Genbank gene 11405 12574 . - . ID=gene-HMPREF2844_03370;Name=HMPREF2844_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03370 KV808190.1 Protein Homology CDS 11405 12574 . - 0 ID=cds-OFJ83952.1;Parent=gene-HMPREF2844_03370;Dbxref=NCBI_GP:OFJ83952.1;Name=OFJ83952.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002240743.1;locus_tag=HMPREF2844_03370;product=methionine adenosyltransferase;protein_id=OFJ83952.1;transl_table=11 KV808190.1 Genbank gene 12968 14017 . + . ID=gene-HMPREF2844_03375;Name=HMPREF2844_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03375 KV808190.1 Protein Homology CDS 12968 14017 . + 0 ID=cds-OFJ83958.1;Parent=gene-HMPREF2844_03375;Dbxref=NCBI_GP:OFJ83958.1;Name=OFJ83958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744567.1;locus_tag=HMPREF2844_03375;product=thiamine biosynthesis protein ApbE;protein_id=OFJ83958.1;transl_table=11 KV808190.1 Genbank gene 14056 14277 . + . ID=gene-HMPREF2844_03380;Name=HMPREF2844_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03380 KV808190.1 Protein Homology CDS 14056 14277 . + 0 ID=cds-OFJ83953.1;Parent=gene-HMPREF2844_03380;Dbxref=NCBI_GP:OFJ83953.1;Name=OFJ83953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744568.1;locus_tag=HMPREF2844_03380;product=hypothetical protein;protein_id=OFJ83953.1;transl_table=11 KV808190.1 Genbank gene 14659 15006 . - . ID=gene-HMPREF2844_03385;Name=HMPREF2844_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03385 KV808190.1 Protein Homology CDS 14659 15006 . - 0 ID=cds-OFJ83954.1;Parent=gene-HMPREF2844_03385;Dbxref=NCBI_GP:OFJ83954.1;Name=OFJ83954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780223.1;locus_tag=HMPREF2844_03385;product=hypothetical protein;protein_id=OFJ83954.1;transl_table=11 KV808190.1 Genbank gene 15013 15204 . - . ID=gene-HMPREF2844_03390;Name=HMPREF2844_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03390 KV808190.1 Protein Homology CDS 15013 15204 . - 0 ID=cds-OFJ83955.1;Parent=gene-HMPREF2844_03390;Dbxref=NCBI_GP:OFJ83955.1;Name=OFJ83955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686508.1;locus_tag=HMPREF2844_03390;product=hypothetical protein;protein_id=OFJ83955.1;transl_table=11 KV808190.1 Genbank gene 15365 15859 . + . ID=gene-HMPREF2844_03395;Name=HMPREF2844_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03395 KV808190.1 Protein Homology CDS 15365 15859 . + 0 ID=cds-OFJ83956.1;Parent=gene-HMPREF2844_03395;Dbxref=NCBI_GP:OFJ83956.1;Name=OFJ83956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757153.1;locus_tag=HMPREF2844_03395;product=hypothetical protein;protein_id=OFJ83956.1;transl_table=11 KV808190.1 Genbank gene 15940 16680 . - . ID=gene-HMPREF2844_03400;Name=HMPREF2844_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03400 KV808190.1 Protein Homology CDS 15940 16680 . - 0 ID=cds-OFJ83957.1;Parent=gene-HMPREF2844_03400;Dbxref=NCBI_GP:OFJ83957.1;Name=OFJ83957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744573.1;locus_tag=HMPREF2844_03400;product=DNA repair protein RecO;protein_id=OFJ83957.1;transl_table=11 KV808190.1 Genbank gene 17027 17362 . - . ID=gene-HMPREF2844_03405;Name=HMPREF2844_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03405 KV808190.1 Protein Homology CDS 17027 17362 . - 0 ID=cds-OFJ83894.1;Parent=gene-HMPREF2844_03405;Dbxref=NCBI_GP:OFJ83894.1;Name=OFJ83894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173318.1;locus_tag=HMPREF2844_03405;product=nucleoid-associated protein;protein_id=OFJ83894.1;transl_table=11 KV808190.1 Genbank gene 17503 19677 . - . ID=gene-HMPREF2844_03410;Name=HMPREF2844_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03410 KV808190.1 Protein Homology CDS 17503 19677 . - 0 ID=cds-OFJ83895.1;Parent=gene-HMPREF2844_03410;Dbxref=NCBI_GP:OFJ83895.1;Name=OFJ83895.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712363.1;locus_tag=HMPREF2844_03410;product=DNA polymerase III subunit gamma/tau;protein_id=OFJ83895.1;transl_table=11 KV808190.1 Genbank gene 19876 20589 . + . ID=gene-HMPREF2844_03415;Name=HMPREF2844_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03415 KV808190.1 Protein Homology CDS 19876 20589 . + 0 ID=cds-OFJ83896.1;Parent=gene-HMPREF2844_03415;Dbxref=NCBI_GP:OFJ83896.1;Name=OFJ83896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519255.1;locus_tag=HMPREF2844_03415;product=aldose epimerase;protein_id=OFJ83896.1;transl_table=11 KV808190.1 Genbank gene 20657 21739 . - . ID=gene-HMPREF2844_03420;Name=HMPREF2844_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03420 KV808190.1 Protein Homology CDS 20657 21739 . - 0 ID=cds-OFJ83897.1;Parent=gene-HMPREF2844_03420;Dbxref=NCBI_GP:OFJ83897.1;Name=OFJ83897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312226.1;locus_tag=HMPREF2844_03420;product=lytic murein transglycosylase B;protein_id=OFJ83897.1;transl_table=11 KV808190.1 Genbank gene 21852 22304 . - . ID=gene-HMPREF2844_03425;Name=HMPREF2844_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03425 KV808190.1 Protein Homology CDS 21852 22304 . - 0 ID=cds-OFJ83898.1;Parent=gene-HMPREF2844_03425;Dbxref=NCBI_GP:OFJ83898.1;Name=OFJ83898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743490.1;locus_tag=HMPREF2844_03425;product=50S ribosomal protein L9;protein_id=OFJ83898.1;transl_table=11 KV808190.1 Genbank gene 22321 22551 . - . ID=gene-HMPREF2844_03430;Name=HMPREF2844_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03430 KV808190.1 Protein Homology CDS 22321 22551 . - 0 ID=cds-OFJ83899.1;Parent=gene-HMPREF2844_03430;Dbxref=NCBI_GP:OFJ83899.1;Name=OFJ83899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009120066.1;locus_tag=HMPREF2844_03430;product=30S ribosomal protein S18;protein_id=OFJ83899.1;transl_table=11 KV808190.1 Genbank gene 22558 22854 . - . ID=gene-HMPREF2844_03435;Name=HMPREF2844_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03435 KV808190.1 Protein Homology CDS 22558 22854 . - 0 ID=cds-OFJ83900.1;Parent=gene-HMPREF2844_03435;Dbxref=NCBI_GP:OFJ83900.1;Name=OFJ83900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519253.1;locus_tag=HMPREF2844_03435;product=primosomal replication protein N;protein_id=OFJ83900.1;transl_table=11 KV808190.1 Genbank gene 22857 23228 . - . ID=gene-HMPREF2844_03440;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF2844_03440 KV808190.1 Protein Homology CDS 22857 23228 . - 0 ID=cds-OFJ83901.1;Parent=gene-HMPREF2844_03440;Dbxref=NCBI_GP:OFJ83901.1;Name=OFJ83901.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686500.1;locus_tag=HMPREF2844_03440;product=30S ribosomal protein S6;protein_id=OFJ83901.1;transl_table=11 KV808190.1 Genbank gene 23267 23446 . + . ID=gene-HMPREF2844_03445;Name=HMPREF2844_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03445 KV808190.1 GeneMarkS+ CDS 23267 23446 . + 0 ID=cds-OFJ83902.1;Parent=gene-HMPREF2844_03445;Dbxref=NCBI_GP:OFJ83902.1;Name=OFJ83902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_03445;product=hypothetical protein;protein_id=OFJ83902.1;transl_table=11 KV808190.1 Genbank gene 23440 24735 . + . ID=gene-HMPREF2844_03450;Name=HMPREF2844_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03450 KV808190.1 Protein Homology CDS 23440 24735 . + 0 ID=cds-OFJ83903.1;Parent=gene-HMPREF2844_03450;Dbxref=NCBI_GP:OFJ83903.1;Name=OFJ83903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573857.1;locus_tag=HMPREF2844_03450;product=serine--tRNA ligase;protein_id=OFJ83903.1;transl_table=11 KV808190.1 Genbank gene 25170 25931 . - . ID=gene-HMPREF2844_03455;Name=HMPREF2844_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03455 KV808190.1 Protein Homology CDS 25170 25931 . - 0 ID=cds-OFJ83874.1;Parent=gene-HMPREF2844_03455;Dbxref=NCBI_GP:OFJ83874.1;Name=OFJ83874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519633.1;locus_tag=HMPREF2844_03455;product=hypothetical protein;protein_id=OFJ83874.1;transl_table=11 KV808190.1 Genbank gene 26371 27321 . + . ID=gene-HMPREF2844_03460;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=HMPREF2844_03460 KV808190.1 Protein Homology CDS 26371 27321 . + 0 ID=cds-OFJ83875.1;Parent=gene-HMPREF2844_03460;Dbxref=NCBI_GP:OFJ83875.1;Name=OFJ83875.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230250.1;locus_tag=HMPREF2844_03460;product=transcriptional regulator CysB;protein_id=OFJ83875.1;transl_table=11 KV808190.1 Genbank gene 27646 28560 . + . ID=gene-HMPREF2844_03465;Name=HMPREF2844_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03465 KV808190.1 Protein Homology CDS 27646 28560 . + 0 ID=cds-OFJ83876.1;Parent=gene-HMPREF2844_03465;Dbxref=NCBI_GP:OFJ83876.1;Name=OFJ83876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684378.1;locus_tag=HMPREF2844_03465;product=hypothetical protein;protein_id=OFJ83876.1;transl_table=11 KV808190.1 Genbank gene 29136 29993 . - . ID=gene-HMPREF2844_03470;Name=HMPREF2844_03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03470 KV808190.1 Protein Homology CDS 29136 29993 . - 0 ID=cds-OFJ83877.1;Parent=gene-HMPREF2844_03470;Dbxref=NCBI_GP:OFJ83877.1;Name=OFJ83877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582195.1;locus_tag=HMPREF2844_03470;product=cytochrome;protein_id=OFJ83877.1;transl_table=11 KV808190.1 Genbank gene 30280 30355 . + . ID=gene-HMPREF2844_03475;Name=HMPREF2844_03475;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_03475 KV808190.1 tRNAscan-SE tRNA 30280 30355 . + . ID=rna-HMPREF2844_03475;Parent=gene-HMPREF2844_03475;anticodon=(pos:30313..30315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03475;product=tRNA-Arg KV808190.1 tRNAscan-SE exon 30280 30355 . + . ID=exon-HMPREF2844_03475-1;Parent=rna-HMPREF2844_03475;anticodon=(pos:30313..30315);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03475;product=tRNA-Arg KV808190.1 Genbank gene 30460 31653 . - . ID=gene-HMPREF2844_03480;Name=HMPREF2844_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03480 KV808190.1 Protein Homology CDS 30460 31653 . - 0 ID=cds-OFJ83878.1;Parent=gene-HMPREF2844_03480;Dbxref=NCBI_GP:OFJ83878.1;Name=OFJ83878.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174127.1;locus_tag=HMPREF2844_03480;product=aromatic amino acid aminotransferase;protein_id=OFJ83878.1;transl_table=11 KV808190.1 Genbank gene 31799 32653 . + . ID=gene-HMPREF2844_03485;Name=HMPREF2844_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03485 KV808190.1 Protein Homology CDS 31799 32653 . + 0 ID=cds-OFJ83879.1;Parent=gene-HMPREF2844_03485;Dbxref=NCBI_GP:OFJ83879.1;Name=OFJ83879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755045.1;locus_tag=HMPREF2844_03485;product=dihydropteroate synthase;protein_id=OFJ83879.1;transl_table=11 KV808190.1 Genbank gene 32940 34277 . + . ID=gene-HMPREF2844_03490;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF2844_03490 KV808190.1 Protein Homology CDS 32940 34277 . + 0 ID=cds-OFJ83880.1;Parent=gene-HMPREF2844_03490;Dbxref=NCBI_GP:OFJ83880.1;Name=OFJ83880.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743468.1;locus_tag=HMPREF2844_03490;product=phosphoglucosamine mutase;protein_id=OFJ83880.1;transl_table=11 KV808190.1 Genbank gene 34589 35272 . + . ID=gene-HMPREF2844_03495;Name=HMPREF2844_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03495 KV808190.1 Protein Homology CDS 34589 35272 . + 0 ID=cds-OFJ83881.1;Parent=gene-HMPREF2844_03495;Dbxref=NCBI_GP:OFJ83881.1;Name=OFJ83881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755047.1;locus_tag=HMPREF2844_03495;product=hypothetical protein;protein_id=OFJ83881.1;transl_table=11 KV808190.1 Genbank gene 35575 36567 . + . ID=gene-HMPREF2844_03500;Name=HMPREF2844_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03500 KV808190.1 Protein Homology CDS 35575 36567 . + 0 ID=cds-OFJ83882.1;Parent=gene-HMPREF2844_03500;Dbxref=NCBI_GP:OFJ83882.1;Name=OFJ83882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216654.1;locus_tag=HMPREF2844_03500;product=L-asparaginase;protein_id=OFJ83882.1;transl_table=11 KV808190.1 Genbank gene 36575 37366 . + . ID=gene-HMPREF2844_03505;Name=HMPREF2844_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03505 KV808190.1 Protein Homology CDS 36575 37366 . + 0 ID=cds-OFJ83883.1;Parent=gene-HMPREF2844_03505;Dbxref=NCBI_GP:OFJ83883.1;Name=OFJ83883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743462.1;locus_tag=HMPREF2844_03505;product=hydrolase;protein_id=OFJ83883.1;transl_table=11 ##sequence-region KV808191.1 1 12840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808191.1 Genbank region 1 12840 . + . ID=KV808191.1:1..12840;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808191.1 Genbank gene 430 633 . + . ID=gene-HMPREF2844_03510;Name=HMPREF2844_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03510 KV808191.1 GeneMarkS+ CDS 430 633 . + 0 ID=cds-OFJ83542.1;Parent=gene-HMPREF2844_03510;Dbxref=NCBI_GP:OFJ83542.1;Name=OFJ83542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_03510;product=hypothetical protein;protein_id=OFJ83542.1;transl_table=11 KV808191.1 Genbank gene 623 1399 . - . ID=gene-HMPREF2844_03515;Name=HMPREF2844_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03515 KV808191.1 Protein Homology CDS 623 1399 . - 0 ID=cds-OFJ83543.1;Parent=gene-HMPREF2844_03515;Dbxref=NCBI_GP:OFJ83543.1;Name=OFJ83543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235376.1;locus_tag=HMPREF2844_03515;product=acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase;protein_id=OFJ83543.1;transl_table=11 KV808191.1 Genbank gene 1485 1934 . - . ID=gene-HMPREF2844_03520;Name=HMPREF2844_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03520 KV808191.1 Protein Homology CDS 1485 1934 . - 0 ID=cds-OFJ83544.1;Parent=gene-HMPREF2844_03520;Dbxref=NCBI_GP:OFJ83544.1;Name=OFJ83544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256300.1;locus_tag=HMPREF2844_03520;product=beta-hydroxyacyl-ACP dehydratase;protein_id=OFJ83544.1;transl_table=11 KV808191.1 Genbank gene 2061 3104 . - . ID=gene-HMPREF2844_03525;Name=HMPREF2844_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03525 KV808191.1 Protein Homology CDS 2061 3104 . - 0 ID=cds-OFJ83545.1;Parent=gene-HMPREF2844_03525;Dbxref=NCBI_GP:OFJ83545.1;Name=OFJ83545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779940.1;locus_tag=HMPREF2844_03525;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=OFJ83545.1;transl_table=11 KV808191.1 Genbank gene 3301 3813 . - . ID=gene-HMPREF2844_03530;Name=HMPREF2844_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03530 KV808191.1 Protein Homology CDS 3301 3813 . - 0 ID=cds-OFJ83546.1;Parent=gene-HMPREF2844_03530;Dbxref=NCBI_GP:OFJ83546.1;Name=OFJ83546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216262.1;locus_tag=HMPREF2844_03530;product=hypothetical protein;protein_id=OFJ83546.1;transl_table=11 KV808191.1 Genbank gene 3968 6400 . - . ID=gene-HMPREF2844_03535;Name=HMPREF2844_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03535 KV808191.1 Protein Homology CDS 3968 6400 . - 0 ID=cds-OFJ83547.1;Parent=gene-HMPREF2844_03535;Dbxref=NCBI_GP:OFJ83547.1;Name=OFJ83547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270788.1;locus_tag=HMPREF2844_03535;product=outer membrane protein assembly factor BamA;protein_id=OFJ83547.1;transl_table=11 KV808191.1 Genbank gene 6405 7745 . - . ID=gene-HMPREF2844_03540;Name=HMPREF2844_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03540 KV808191.1 Protein Homology CDS 6405 7745 . - 0 ID=cds-OFJ83548.1;Parent=gene-HMPREF2844_03540;Dbxref=NCBI_GP:OFJ83548.1;Name=OFJ83548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681697.1;locus_tag=HMPREF2844_03540;product=RIP metalloprotease RseP;protein_id=OFJ83548.1;transl_table=11 KV808191.1 Genbank gene 7956 9140 . - . ID=gene-HMPREF2844_03545;Name=HMPREF2844_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03545 KV808191.1 Protein Homology CDS 7956 9140 . - 0 ID=cds-OFJ83549.1;Parent=gene-HMPREF2844_03545;Dbxref=NCBI_GP:OFJ83549.1;Name=OFJ83549.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312627.1;locus_tag=HMPREF2844_03545;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=OFJ83549.1;transl_table=11 KV808191.1 Genbank gene 9365 10159 . - . ID=gene-HMPREF2844_03550;Name=HMPREF2844_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03550 KV808191.1 Protein Homology CDS 9365 10159 . - 0 ID=cds-OFJ83550.1;Parent=gene-HMPREF2844_03550;Dbxref=NCBI_GP:OFJ83550.1;Name=OFJ83550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519125.1;locus_tag=HMPREF2844_03550;product=phosphatidate cytidylyltransferase;protein_id=OFJ83550.1;transl_table=11 KV808191.1 Genbank gene 10162 10908 . - . ID=gene-HMPREF2844_03555;Name=HMPREF2844_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03555 KV808191.1 Protein Homology CDS 10162 10908 . - 0 ID=cds-OFJ83551.1;Parent=gene-HMPREF2844_03555;Dbxref=NCBI_GP:OFJ83551.1;Name=OFJ83551.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270792.1;locus_tag=HMPREF2844_03555;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=OFJ83551.1;transl_table=11 KV808191.1 Genbank gene 10966 11523 . - . ID=gene-HMPREF2844_03560;Name=HMPREF2844_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03560 KV808191.1 Protein Homology CDS 10966 11523 . - 0 ID=cds-OFJ83552.1;Parent=gene-HMPREF2844_03560;Dbxref=NCBI_GP:OFJ83552.1;Name=OFJ83552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389871.1;locus_tag=HMPREF2844_03560;product=ribosome recycling factor;protein_id=OFJ83552.1;transl_table=11 KV808191.1 Genbank gene 11780 12748 . - . ID=gene-HMPREF2844_03565;Name=HMPREF2844_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03565 KV808191.1 Protein Homology CDS 11780 12748 . - 0 ID=cds-OFJ83553.1;Parent=gene-HMPREF2844_03565;Dbxref=NCBI_GP:OFJ83553.1;Name=OFJ83553.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684768.1;locus_tag=HMPREF2844_03565;product=hypothetical protein;protein_id=OFJ83553.1;transl_table=11 ##sequence-region KV808192.1 1 4394 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808192.1 Genbank region 1 4394 . + . ID=KV808192.1:1..4394;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808192.1 Genbank gene 440 1162 . + . ID=gene-HMPREF2844_03570;Name=HMPREF2844_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03570 KV808192.1 GeneMarkS+ CDS 440 1162 . + 0 ID=cds-OFJ83539.1;Parent=gene-HMPREF2844_03570;Dbxref=NCBI_GP:OFJ83539.1;Name=OFJ83539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_03570;product=hypothetical protein;protein_id=OFJ83539.1;transl_table=11 KV808192.1 Genbank gene 1705 3048 . + . ID=gene-HMPREF2844_03575;Name=HMPREF2844_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03575 KV808192.1 Protein Homology CDS 1705 3048 . + 0 ID=cds-OFJ83540.1;Parent=gene-HMPREF2844_03575;Dbxref=NCBI_GP:OFJ83540.1;Name=OFJ83540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219139.1;locus_tag=HMPREF2844_03575;product=aldehyde dehydrogenase;protein_id=OFJ83540.1;transl_table=11 KV808192.1 Genbank gene 3292 4140 . - . ID=gene-HMPREF2844_03580;Name=HMPREF2844_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03580 KV808192.1 Protein Homology CDS 3292 4140 . - 0 ID=cds-OFJ83541.1;Parent=gene-HMPREF2844_03580;Dbxref=NCBI_GP:OFJ83541.1;Name=OFJ83541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742214.1;locus_tag=HMPREF2844_03580;product=ferredoxin;protein_id=OFJ83541.1;transl_table=11 ##sequence-region KV808193.1 1 825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808193.1 Genbank region 1 825 . + . ID=KV808193.1:1..825;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808193.1 Genbank gene 145 609 . - . ID=gene-HMPREF2844_03585;Name=HMPREF2844_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03585 KV808193.1 Protein Homology CDS 145 609 . - 0 ID=cds-OFJ83399.1;Parent=gene-HMPREF2844_03585;Dbxref=NCBI_GP:OFJ83399.1;Name=OFJ83399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743777.1;locus_tag=HMPREF2844_03585;product=pilin;protein_id=OFJ83399.1;transl_table=11 ##sequence-region KV808194.1 1 246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808194.1 Genbank region 1 246 . + . ID=KV808194.1:1..246;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808194.1 Genbank pseudogene 1 184 . - . ID=gene-HMPREF2844_03590;Name=HMPREF2844_03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_03590;pseudo=true KV808194.1 Protein Homology CDS 1 184 . - 0 ID=cds-HMPREF2844_03590;Parent=gene-HMPREF2844_03590;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270390.1;locus_tag=HMPREF2844_03590;product=integrase;pseudo=true;transl_table=11 ##sequence-region KV808195.1 1 10838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808195.1 Genbank region 1 10838 . + . ID=KV808195.1:1..10838;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808195.1 Genbank gene 82 837 . - . ID=gene-HMPREF2844_03595;Name=HMPREF2844_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03595 KV808195.1 Protein Homology CDS 82 837 . - 0 ID=cds-OFJ83317.1;Parent=gene-HMPREF2844_03595;Dbxref=NCBI_GP:OFJ83317.1;Name=OFJ83317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769081.1;locus_tag=HMPREF2844_03595;product=hypothetical protein;protein_id=OFJ83317.1;transl_table=11 KV808195.1 Genbank gene 912 2600 . - . ID=gene-HMPREF2844_03600;Name=HMPREF2844_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03600 KV808195.1 Protein Homology CDS 912 2600 . - 0 ID=cds-OFJ83318.1;Parent=gene-HMPREF2844_03600;Dbxref=NCBI_GP:OFJ83318.1;Name=OFJ83318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174098.1;locus_tag=HMPREF2844_03600;product=glutamine--tRNA ligase;protein_id=OFJ83318.1;transl_table=11 KV808195.1 Genbank gene 2710 3486 . - . ID=gene-HMPREF2844_03605;Name=HMPREF2844_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03605 KV808195.1 Protein Homology CDS 2710 3486 . - 0 ID=cds-OFJ83319.1;Parent=gene-HMPREF2844_03605;Dbxref=NCBI_GP:OFJ83319.1;Name=OFJ83319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688020.1;locus_tag=HMPREF2844_03605;product=DeoR family transcriptional regulator;protein_id=OFJ83319.1;transl_table=11 KV808195.1 Genbank gene 3648 4205 . - . ID=gene-HMPREF2844_03610;Name=HMPREF2844_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03610 KV808195.1 Protein Homology CDS 3648 4205 . - 0 ID=cds-OFJ83320.1;Parent=gene-HMPREF2844_03610;Dbxref=NCBI_GP:OFJ83320.1;Name=OFJ83320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220495.1;locus_tag=HMPREF2844_03610;product=nitroreductase;protein_id=OFJ83320.1;transl_table=11 KV808195.1 Genbank gene 4421 5527 . - . ID=gene-HMPREF2844_03615;Name=HMPREF2844_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03615 KV808195.1 Protein Homology CDS 4421 5527 . - 0 ID=cds-OFJ83321.1;Parent=gene-HMPREF2844_03615;Dbxref=NCBI_GP:OFJ83321.1;Name=OFJ83321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678242.1;locus_tag=HMPREF2844_03615;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=OFJ83321.1;transl_table=11 KV808195.1 Genbank gene 5882 6313 . + . ID=gene-HMPREF2844_03620;Name=HMPREF2844_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03620 KV808195.1 Protein Homology CDS 5882 6313 . + 0 ID=cds-OFJ83322.1;Parent=gene-HMPREF2844_03620;Dbxref=NCBI_GP:OFJ83322.1;Name=OFJ83322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685973.1;locus_tag=HMPREF2844_03620;product=ribosome maturation factor;protein_id=OFJ83322.1;transl_table=11 KV808195.1 Genbank gene 6339 7841 . + . ID=gene-HMPREF2844_03625;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF2844_03625 KV808195.1 Protein Homology CDS 6339 7841 . + 0 ID=cds-OFJ83323.1;Parent=gene-HMPREF2844_03625;Dbxref=NCBI_GP:OFJ83323.1;Name=OFJ83323.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519317.1;locus_tag=HMPREF2844_03625;product=transcription termination/antitermination protein NusA;protein_id=OFJ83323.1;transl_table=11 KV808195.1 Genbank gene 7841 10759 . + . ID=gene-HMPREF2844_03630;Name=HMPREF2844_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03630 KV808195.1 Protein Homology CDS 7841 10759 . + 0 ID=cds-OFJ83324.1;Parent=gene-HMPREF2844_03630;Dbxref=NCBI_GP:OFJ83324.1;Name=OFJ83324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271546.1;locus_tag=HMPREF2844_03630;product=translation initiation factor IF-2;protein_id=OFJ83324.1;transl_table=11 ##sequence-region KV808196.1 1 889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808196.1 Genbank region 1 889 . + . ID=KV808196.1:1..889;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808196.1 Genbank gene 81 731 . - . ID=gene-HMPREF2844_03635;Name=HMPREF2844_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03635 KV808196.1 Protein Homology CDS 81 731 . - 0 ID=cds-OFJ82828.1;Parent=gene-HMPREF2844_03635;Dbxref=NCBI_GP:OFJ82828.1;Name=OFJ82828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743542.1;locus_tag=HMPREF2844_03635;product=oxygen-insensitive NAD(P)H-dependent nitroreductase NfsB;protein_id=OFJ82828.1;transl_table=11 ##sequence-region KV808197.1 1 25849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808197.1 Genbank region 1 25849 . + . ID=KV808197.1:1..25849;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808197.1 Genbank gene 62 850 . - . ID=gene-HMPREF2844_03640;Name=HMPREF2844_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03640 KV808197.1 Protein Homology CDS 62 850 . - 0 ID=cds-OFJ82789.1;Parent=gene-HMPREF2844_03640;Dbxref=NCBI_GP:OFJ82789.1;Name=OFJ82789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270385.1;locus_tag=HMPREF2844_03640;product=16S rRNA methyltransferase;protein_id=OFJ82789.1;transl_table=11 KV808197.1 Genbank gene 1048 2724 . + . ID=gene-HMPREF2844_03645;Name=HMPREF2844_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03645 KV808197.1 Protein Homology CDS 1048 2724 . + 0 ID=cds-OFJ82790.1;Parent=gene-HMPREF2844_03645;Dbxref=NCBI_GP:OFJ82790.1;Name=OFJ82790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742723.1;locus_tag=HMPREF2844_03645;product=formate--tetrahydrofolate ligase;protein_id=OFJ82790.1;transl_table=11 KV808197.1 Genbank gene 3100 5157 . + . ID=gene-HMPREF2844_03650;Name=HMPREF2844_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03650 KV808197.1 Protein Homology CDS 3100 5157 . + 0 ID=cds-OFJ82791.1;Parent=gene-HMPREF2844_03650;Dbxref=NCBI_GP:OFJ82791.1;Name=OFJ82791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519026.1;locus_tag=HMPREF2844_03650;product=RNA degradosome polyphosphate kinase;protein_id=OFJ82791.1;transl_table=11 KV808197.1 Genbank gene 5546 5770 . - . ID=gene-HMPREF2844_03655;Name=HMPREF2844_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03655 KV808197.1 GeneMarkS+ CDS 5546 5770 . - 0 ID=cds-OFJ82766.1;Parent=gene-HMPREF2844_03655;Dbxref=NCBI_GP:OFJ82766.1;Name=OFJ82766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_03655;product=hypothetical protein;protein_id=OFJ82766.1;transl_table=11 KV808197.1 Genbank gene 5788 7242 . - . ID=gene-HMPREF2844_03660;Name=HMPREF2844_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03660 KV808197.1 Protein Homology CDS 5788 7242 . - 0 ID=cds-OFJ82767.1;Parent=gene-HMPREF2844_03660;Dbxref=NCBI_GP:OFJ82767.1;Name=OFJ82767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225872.1;locus_tag=HMPREF2844_03660;product=magnesium transporter;protein_id=OFJ82767.1;transl_table=11 KV808197.1 Genbank gene 7844 9196 . + . ID=gene-HMPREF2844_03665;Name=HMPREF2844_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03665 KV808197.1 Protein Homology CDS 7844 9196 . + 0 ID=cds-OFJ82768.1;Parent=gene-HMPREF2844_03665;Dbxref=NCBI_GP:OFJ82768.1;Name=OFJ82768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687136.1;locus_tag=HMPREF2844_03665;product=MFS transporter;protein_id=OFJ82768.1;transl_table=11 KV808197.1 Genbank gene 9319 11577 . + . ID=gene-HMPREF2844_03670;Name=HMPREF2844_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03670 KV808197.1 Protein Homology CDS 9319 11577 . + 0 ID=cds-OFJ82769.1;Parent=gene-HMPREF2844_03670;Dbxref=NCBI_GP:OFJ82769.1;Name=OFJ82769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234550.1;locus_tag=HMPREF2844_03670;product=maltose phosphorylase;protein_id=OFJ82769.1;transl_table=11 KV808197.1 Genbank gene 11590 12255 . + . ID=gene-HMPREF2844_03675;Name=HMPREF2844_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03675 KV808197.1 Protein Homology CDS 11590 12255 . + 0 ID=cds-OFJ82770.1;Parent=gene-HMPREF2844_03675;Dbxref=NCBI_GP:OFJ82770.1;Name=OFJ82770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212463.1;locus_tag=HMPREF2844_03675;product=beta-phosphoglucomutase;protein_id=OFJ82770.1;transl_table=11 KV808197.1 Genbank gene 12348 12779 . - . ID=gene-HMPREF2844_03680;Name=HMPREF2844_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03680 KV808197.1 Protein Homology CDS 12348 12779 . - 0 ID=cds-OFJ82771.1;Parent=gene-HMPREF2844_03680;Dbxref=NCBI_GP:OFJ82771.1;Name=OFJ82771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258698.1;locus_tag=HMPREF2844_03680;product=hypothetical protein;protein_id=OFJ82771.1;transl_table=11 KV808197.1 Genbank gene 13124 13936 . - . ID=gene-HMPREF2844_03685;Name=HMPREF2844_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03685 KV808197.1 Protein Homology CDS 13124 13936 . - 0 ID=cds-OFJ82772.1;Parent=gene-HMPREF2844_03685;Dbxref=NCBI_GP:OFJ82772.1;Name=OFJ82772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687140.1;locus_tag=HMPREF2844_03685;product=fimb protein;protein_id=OFJ82772.1;transl_table=11 KV808197.1 Genbank gene 14127 14747 . - . ID=gene-HMPREF2844_03690;Name=HMPREF2844_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03690 KV808197.1 Protein Homology CDS 14127 14747 . - 0 ID=cds-OFJ82773.1;Parent=gene-HMPREF2844_03690;Dbxref=NCBI_GP:OFJ82773.1;Name=OFJ82773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680049.1;locus_tag=HMPREF2844_03690;product=threonylcarbamoyl-AMP synthase;protein_id=OFJ82773.1;transl_table=11 KV808197.1 Genbank gene 14881 15240 . - . ID=gene-HMPREF2844_03695;Name=HMPREF2844_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03695 KV808197.1 Protein Homology CDS 14881 15240 . - 0 ID=cds-OFJ82774.1;Parent=gene-HMPREF2844_03695;Dbxref=NCBI_GP:OFJ82774.1;Name=OFJ82774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741620.1;locus_tag=HMPREF2844_03695;product=hypothetical protein;protein_id=OFJ82774.1;transl_table=11 KV808197.1 Genbank gene 15262 15849 . - . ID=gene-HMPREF2844_03700;Name=HMPREF2844_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03700 KV808197.1 Protein Homology CDS 15262 15849 . - 0 ID=cds-OFJ82775.1;Parent=gene-HMPREF2844_03700;Dbxref=NCBI_GP:OFJ82775.1;Name=OFJ82775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312310.1;locus_tag=HMPREF2844_03700;product=peptidase;protein_id=OFJ82775.1;transl_table=11 KV808197.1 Genbank gene 16218 17354 . + . ID=gene-HMPREF2844_03705;Name=HMPREF2844_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03705 KV808197.1 Protein Homology CDS 16218 17354 . + 0 ID=cds-OFJ82776.1;Parent=gene-HMPREF2844_03705;Dbxref=NCBI_GP:OFJ82776.1;Name=OFJ82776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709746.1;locus_tag=HMPREF2844_03705;product=polyamine ABC transporter substrate-binding protein;protein_id=OFJ82776.1;transl_table=11 KV808197.1 Genbank gene 17646 19619 . - . ID=gene-HMPREF2844_03710;Name=HMPREF2844_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03710 KV808197.1 Protein Homology CDS 17646 19619 . - 0 ID=cds-OFJ82777.1;Parent=gene-HMPREF2844_03710;Dbxref=NCBI_GP:OFJ82777.1;Name=OFJ82777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741611.1;locus_tag=HMPREF2844_03710;product=TonB-dependent copper receptor;protein_id=OFJ82777.1;transl_table=11 KV808197.1 Genbank gene 20020 20853 . - . ID=gene-HMPREF2844_03715;Name=HMPREF2844_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03715 KV808197.1 Protein Homology CDS 20020 20853 . - 0 ID=cds-OFJ82778.1;Parent=gene-HMPREF2844_03715;Dbxref=NCBI_GP:OFJ82778.1;Name=OFJ82778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310848.1;locus_tag=HMPREF2844_03715;product=phosphoserine phosphatase SerB;protein_id=OFJ82778.1;transl_table=11 KV808197.1 Genbank gene 21222 22067 . - . ID=gene-HMPREF2844_03720;Name=HMPREF2844_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03720 KV808197.1 Protein Homology CDS 21222 22067 . - 0 ID=cds-OFJ82779.1;Parent=gene-HMPREF2844_03720;Dbxref=NCBI_GP:OFJ82779.1;Name=OFJ82779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270372.1;locus_tag=HMPREF2844_03720;product=phosphatase;protein_id=OFJ82779.1;transl_table=11 KV808197.1 Genbank pseudogene 22066 22316 . + . ID=gene-HMPREF2844_03725;Name=HMPREF2844_03725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_03725;pseudo=true KV808197.1 Protein Homology CDS 22066 22316 . + 0 ID=cds-HMPREF2844_03725;Parent=gene-HMPREF2844_03725;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146706.1;locus_tag=HMPREF2844_03725;product=hypothetical protein;pseudo=true;transl_table=11 KV808197.1 Genbank gene 22359 22577 . - . ID=gene-HMPREF2844_03730;Name=HMPREF2844_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03730 KV808197.1 Protein Homology CDS 22359 22577 . - 0 ID=cds-OFJ82780.1;Parent=gene-HMPREF2844_03730;Dbxref=NCBI_GP:OFJ82780.1;Name=OFJ82780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311034.1;locus_tag=HMPREF2844_03730;product=hypothetical protein;protein_id=OFJ82780.1;transl_table=11 KV808197.1 Genbank gene 22555 22788 . - . ID=gene-HMPREF2844_03735;Name=HMPREF2844_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03735 KV808197.1 Protein Homology CDS 22555 22788 . - 0 ID=cds-OFJ82781.1;Parent=gene-HMPREF2844_03735;Dbxref=NCBI_GP:OFJ82781.1;Name=OFJ82781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582378.1;locus_tag=HMPREF2844_03735;product=RNA-binding protein;protein_id=OFJ82781.1;transl_table=11 KV808197.1 Genbank gene 23395 25596 . + . ID=gene-HMPREF2844_03740;Name=HMPREF2844_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03740 KV808197.1 Protein Homology CDS 23395 25596 . + 0 ID=cds-OFJ82782.1;Parent=gene-HMPREF2844_03740;Dbxref=NCBI_GP:OFJ82782.1;Name=OFJ82782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748378.1;locus_tag=HMPREF2844_03740;product=ferripyoverdine receptor;protein_id=OFJ82782.1;transl_table=11 ##sequence-region KV808198.1 1 7167 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808198.1 Genbank region 1 7167 . + . ID=KV808198.1:1..7167;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808198.1 Genbank gene 243 770 . - . ID=gene-HMPREF2844_03745;Name=HMPREF2844_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03745 KV808198.1 Protein Homology CDS 243 770 . - 0 ID=cds-OFJ82741.1;Parent=gene-HMPREF2844_03745;Dbxref=NCBI_GP:OFJ82741.1;Name=OFJ82741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688312.1;locus_tag=HMPREF2844_03745;product=hypothetical protein;protein_id=OFJ82741.1;transl_table=11 KV808198.1 Genbank gene 993 1631 . + . ID=gene-HMPREF2844_03750;Name=HMPREF2844_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03750 KV808198.1 Protein Homology CDS 993 1631 . + 0 ID=cds-OFJ82742.1;Parent=gene-HMPREF2844_03750;Dbxref=NCBI_GP:OFJ82742.1;Name=OFJ82742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749221.1;locus_tag=HMPREF2844_03750;product=hypothetical protein;protein_id=OFJ82742.1;transl_table=11 KV808198.1 Genbank gene 1786 3258 . - . ID=gene-HMPREF2844_03755;Name=HMPREF2844_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03755 KV808198.1 Protein Homology CDS 1786 3258 . - 0 ID=cds-OFJ82743.1;Parent=gene-HMPREF2844_03755;Dbxref=NCBI_GP:OFJ82743.1;Name=OFJ82743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218534.1;locus_tag=HMPREF2844_03755;product=pyruvate kinase;protein_id=OFJ82743.1;transl_table=11 KV808198.1 Genbank gene 3603 4166 . + . ID=gene-HMPREF2844_03760;Name=HMPREF2844_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03760 KV808198.1 Protein Homology CDS 3603 4166 . + 0 ID=cds-OFJ82744.1;Parent=gene-HMPREF2844_03760;Dbxref=NCBI_GP:OFJ82744.1;Name=OFJ82744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767818.1;locus_tag=HMPREF2844_03760;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=OFJ82744.1;transl_table=11 KV808198.1 Genbank gene 4452 4889 . + . ID=gene-HMPREF2844_03765;Name=HMPREF2844_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03765 KV808198.1 Protein Homology CDS 4452 4889 . + 0 ID=cds-OFJ82745.1;Parent=gene-HMPREF2844_03765;Dbxref=NCBI_GP:OFJ82745.1;Name=OFJ82745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002225692.1;locus_tag=HMPREF2844_03765;product=PTS mannose transporter subunit IIA;protein_id=OFJ82745.1;transl_table=11 KV808198.1 Genbank gene 4937 5206 . + . ID=gene-HMPREF2844_03770;Name=HMPREF2844_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03770 KV808198.1 Protein Homology CDS 4937 5206 . + 0 ID=cds-OFJ82746.1;Parent=gene-HMPREF2844_03770;Dbxref=NCBI_GP:OFJ82746.1;Name=OFJ82746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174431.1;locus_tag=HMPREF2844_03770;product=phosphocarrier protein HPr;protein_id=OFJ82746.1;transl_table=11 KV808198.1 Genbank gene 5206 6993 . + . ID=gene-HMPREF2844_03775;Name=HMPREF2844_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03775 KV808198.1 Protein Homology CDS 5206 6993 . + 0 ID=cds-OFJ82747.1;Parent=gene-HMPREF2844_03775;Dbxref=NCBI_GP:OFJ82747.1;Name=OFJ82747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742588.1;locus_tag=HMPREF2844_03775;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=OFJ82747.1;transl_table=11 ##sequence-region KV808199.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808199.1 Genbank region 1 334 . + . ID=KV808199.1:1..334;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808199.1 Genbank pseudogene 1 334 . - . ID=gene-HMPREF2844_03780;Name=HMPREF2844_03780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_03780;pseudo=true KV808199.1 Protein Homology CDS 1 334 . - 0 ID=cds-HMPREF2844_03780;Parent=gene-HMPREF2844_03780;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684692.1;locus_tag=HMPREF2844_03780;product=integrase;pseudo=true;transl_table=11 ##sequence-region KV808200.1 1 40175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808200.1 Genbank region 1 40175 . + . ID=KV808200.1:1..40175;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808200.1 Genbank gene 156 941 . + . ID=gene-HMPREF2844_03785;Name=HMPREF2844_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03785 KV808200.1 Protein Homology CDS 156 941 . + 0 ID=cds-OFJ82400.1;Parent=gene-HMPREF2844_03785;Dbxref=NCBI_GP:OFJ82400.1;Name=OFJ82400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVE0.1;locus_tag=HMPREF2844_03785;product=tryptophan synthase subunit alpha;protein_id=OFJ82400.1;transl_table=11 KV808200.1 Genbank gene 1001 1876 . + . ID=gene-HMPREF2844_03790;Name=HMPREF2844_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03790 KV808200.1 Protein Homology CDS 1001 1876 . + 0 ID=cds-OFJ82401.1;Parent=gene-HMPREF2844_03790;Dbxref=NCBI_GP:OFJ82401.1;Name=OFJ82401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449313.1;locus_tag=HMPREF2844_03790;product=acetyl-CoA carboxylase carboxyl transferase subunit beta;protein_id=OFJ82401.1;transl_table=11 KV808200.1 Genbank gene 2315 4552 . + . ID=gene-HMPREF2844_03795;Name=HMPREF2844_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03795 KV808200.1 Protein Homology CDS 2315 4552 . + 0 ID=cds-OFJ82421.1;Parent=gene-HMPREF2844_03795;Dbxref=NCBI_GP:OFJ82421.1;Name=OFJ82421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449380.1;locus_tag=HMPREF2844_03795;product=4Fe-4S binding protein;protein_id=OFJ82421.1;transl_table=11 KV808200.1 Genbank gene 4707 6677 . + . ID=gene-HMPREF2844_03800;Name=HMPREF2844_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03800 KV808200.1 Protein Homology CDS 4707 6677 . + 0 ID=cds-OFJ82402.1;Parent=gene-HMPREF2844_03800;Dbxref=NCBI_GP:OFJ82402.1;Name=OFJ82402.1;Note=reduces nitrous oxide to nitrogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712466.1;locus_tag=HMPREF2844_03800;product=TAT-dependent nitrous-oxide reductase;protein_id=OFJ82402.1;transl_table=11 KV808200.1 Genbank gene 6886 8241 . + . ID=gene-HMPREF2844_03805;Name=HMPREF2844_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03805 KV808200.1 Protein Homology CDS 6886 8241 . + 0 ID=cds-OFJ82403.1;Parent=gene-HMPREF2844_03805;Dbxref=NCBI_GP:OFJ82403.1;Name=OFJ82403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777561.1;locus_tag=HMPREF2844_03805;product=carbohydrate-binding protein;protein_id=OFJ82403.1;transl_table=11 KV808200.1 Genbank gene 8519 9415 . + . ID=gene-HMPREF2844_03810;Name=HMPREF2844_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03810 KV808200.1 Protein Homology CDS 8519 9415 . + 0 ID=cds-OFJ82404.1;Parent=gene-HMPREF2844_03810;Dbxref=NCBI_GP:OFJ82404.1;Name=OFJ82404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709597.1;locus_tag=HMPREF2844_03810;product=ABC transporter ATP-binding protein;protein_id=OFJ82404.1;transl_table=11 KV808200.1 Genbank gene 9412 10242 . + . ID=gene-HMPREF2844_03815;Name=HMPREF2844_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03815 KV808200.1 Protein Homology CDS 9412 10242 . + 0 ID=cds-OFJ82405.1;Parent=gene-HMPREF2844_03815;Dbxref=NCBI_GP:OFJ82405.1;Name=OFJ82405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688339.1;locus_tag=HMPREF2844_03815;product=hypothetical protein;protein_id=OFJ82405.1;transl_table=11 KV808200.1 Genbank gene 10239 10733 . + . ID=gene-HMPREF2844_03820;Name=HMPREF2844_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03820 KV808200.1 Protein Homology CDS 10239 10733 . + 0 ID=cds-OFJ82406.1;Parent=gene-HMPREF2844_03820;Dbxref=NCBI_GP:OFJ82406.1;Name=OFJ82406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574176.1;locus_tag=HMPREF2844_03820;product=copper-binding protein;protein_id=OFJ82406.1;transl_table=11 KV808200.1 Genbank gene 11524 14181 . + . ID=gene-HMPREF2844_03825;Name=HMPREF2844_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03825 KV808200.1 Protein Homology CDS 11524 14181 . + 0 ID=cds-OFJ82407.1;Parent=gene-HMPREF2844_03825;Dbxref=NCBI_GP:OFJ82407.1;Name=OFJ82407.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741048.1;locus_tag=HMPREF2844_03825;product=type 1 secretion protein;protein_id=OFJ82407.1;transl_table=11 KV808200.1 Genbank gene 14749 15213 . - . ID=gene-HMPREF2844_03830;Name=HMPREF2844_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03830 KV808200.1 Protein Homology CDS 14749 15213 . - 0 ID=cds-OFJ82408.1;Parent=gene-HMPREF2844_03830;Dbxref=NCBI_GP:OFJ82408.1;Name=OFJ82408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764386.1;locus_tag=HMPREF2844_03830;product=osmoprotectant transport activator ProQ;protein_id=OFJ82408.1;transl_table=11 KV808200.1 Genbank gene 15442 16542 . - . ID=gene-HMPREF2844_03835;Name=HMPREF2844_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03835 KV808200.1 Protein Homology CDS 15442 16542 . - 0 ID=cds-OFJ82409.1;Parent=gene-HMPREF2844_03835;Dbxref=NCBI_GP:OFJ82409.1;Name=OFJ82409.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002223526.1;locus_tag=HMPREF2844_03835;product=chorismate synthase;protein_id=OFJ82409.1;transl_table=11 KV808200.1 Genbank gene 16647 17417 . - . ID=gene-HMPREF2844_03840;Name=HMPREF2844_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03840 KV808200.1 Protein Homology CDS 16647 17417 . - 0 ID=cds-OFJ82410.1;Parent=gene-HMPREF2844_03840;Dbxref=NCBI_GP:OFJ82410.1;Name=OFJ82410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761428.1;locus_tag=HMPREF2844_03840;product=hypothetical protein;protein_id=OFJ82410.1;transl_table=11 KV808200.1 Genbank gene 17534 18616 . - . ID=gene-HMPREF2844_03845;Name=HMPREF2844_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03845 KV808200.1 Protein Homology CDS 17534 18616 . - 0 ID=cds-OFJ82411.1;Parent=gene-HMPREF2844_03845;Dbxref=NCBI_GP:OFJ82411.1;Name=OFJ82411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777235.1;locus_tag=HMPREF2844_03845;product=tRNA (uracil-5-)-methyltransferase;protein_id=OFJ82411.1;transl_table=11 KV808200.1 Genbank gene 18764 19480 . - . ID=gene-HMPREF2844_03850;Name=HMPREF2844_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03850 KV808200.1 Protein Homology CDS 18764 19480 . - 0 ID=cds-OFJ82412.1;Parent=gene-HMPREF2844_03850;Dbxref=NCBI_GP:OFJ82412.1;Name=OFJ82412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756038.1;locus_tag=HMPREF2844_03850;product=GntR family transcriptional regulator;protein_id=OFJ82412.1;transl_table=11 KV808200.1 Genbank gene 19841 20260 . - . ID=gene-HMPREF2844_03855;Name=HMPREF2844_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03855 KV808200.1 Protein Homology CDS 19841 20260 . - 0 ID=cds-OFJ82413.1;Parent=gene-HMPREF2844_03855;Dbxref=NCBI_GP:OFJ82413.1;Name=OFJ82413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311209.1;locus_tag=HMPREF2844_03855;product=peroxiredoxin;protein_id=OFJ82413.1;transl_table=11 KV808200.1 Genbank gene 20412 21770 . - . ID=gene-HMPREF2844_03860;Name=HMPREF2844_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03860 KV808200.1 Protein Homology CDS 20412 21770 . - 0 ID=cds-OFJ82414.1;Parent=gene-HMPREF2844_03860;Dbxref=NCBI_GP:OFJ82414.1;Name=OFJ82414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565735.1;locus_tag=HMPREF2844_03860;product=hypothetical protein;protein_id=OFJ82414.1;transl_table=11 KV808200.1 Genbank gene 21825 22643 . - . ID=gene-HMPREF2844_03865;Name=HMPREF2844_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03865 KV808200.1 Protein Homology CDS 21825 22643 . - 0 ID=cds-OFJ82415.1;Parent=gene-HMPREF2844_03865;Dbxref=NCBI_GP:OFJ82415.1;Name=OFJ82415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311390.1;locus_tag=HMPREF2844_03865;product=hypothetical protein;protein_id=OFJ82415.1;transl_table=11 KV808200.1 Genbank gene 22663 22935 . - . ID=gene-HMPREF2844_03870;Name=HMPREF2844_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03870 KV808200.1 Protein Homology CDS 22663 22935 . - 0 ID=cds-OFJ82416.1;Parent=gene-HMPREF2844_03870;Dbxref=NCBI_GP:OFJ82416.1;Name=OFJ82416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448620.1;locus_tag=HMPREF2844_03870;product=hypothetical protein;protein_id=OFJ82416.1;transl_table=11 KV808200.1 Genbank gene 23717 24775 . - . ID=gene-HMPREF2844_03875;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=HMPREF2844_03875 KV808200.1 Protein Homology CDS 23717 24775 . - 0 ID=cds-OFJ82417.1;Parent=gene-HMPREF2844_03875;Dbxref=NCBI_GP:OFJ82417.1;Name=OFJ82417.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232688.1;locus_tag=HMPREF2844_03875;product=alanine racemase;protein_id=OFJ82417.1;transl_table=11 KV808200.1 Genbank gene 25234 26115 . + . ID=gene-HMPREF2844_03880;Name=HMPREF2844_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03880 KV808200.1 Protein Homology CDS 25234 26115 . + 0 ID=cds-OFJ82418.1;Parent=gene-HMPREF2844_03880;Dbxref=NCBI_GP:OFJ82418.1;Name=OFJ82418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427377.1;locus_tag=HMPREF2844_03880;product=carbohydrate kinase;protein_id=OFJ82418.1;transl_table=11 KV808200.1 Genbank gene 26195 27001 . - . ID=gene-HMPREF2844_03885;Name=HMPREF2844_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03885 KV808200.1 Protein Homology CDS 26195 27001 . - 0 ID=cds-OFJ82419.1;Parent=gene-HMPREF2844_03885;Dbxref=NCBI_GP:OFJ82419.1;Name=OFJ82419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776780.1;locus_tag=HMPREF2844_03885;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=OFJ82419.1;transl_table=11 KV808200.1 Genbank gene 27291 28088 . - . ID=gene-HMPREF2844_03890;Name=HMPREF2844_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03890 KV808200.1 Protein Homology CDS 27291 28088 . - 0 ID=cds-OFJ82420.1;Parent=gene-HMPREF2844_03890;Dbxref=NCBI_GP:OFJ82420.1;Name=OFJ82420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270489.1;locus_tag=HMPREF2844_03890;product=hydrolase;protein_id=OFJ82420.1;transl_table=11 KV808200.1 Genbank gene 28298 29701 . - . ID=gene-HMPREF2844_03895;Name=HMPREF2844_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03895 KV808200.1 Protein Homology CDS 28298 29701 . - 0 ID=cds-OFJ82422.1;Parent=gene-HMPREF2844_03895;Dbxref=NCBI_GP:OFJ82422.1;Name=OFJ82422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680517.1;locus_tag=HMPREF2844_03895;product=DNA polymerase III subunit epsilon;protein_id=OFJ82422.1;transl_table=11 KV808200.1 Genbank gene 29820 29896 . + . ID=gene-HMPREF2844_03900;Name=HMPREF2844_03900;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_03900 KV808200.1 tRNAscan-SE tRNA 29820 29896 . + . ID=rna-HMPREF2844_03900;Parent=gene-HMPREF2844_03900;anticodon=(pos:29854..29856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03900;product=tRNA-Arg KV808200.1 tRNAscan-SE exon 29820 29896 . + . ID=exon-HMPREF2844_03900-1;Parent=rna-HMPREF2844_03900;anticodon=(pos:29854..29856);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03900;product=tRNA-Arg KV808200.1 Genbank gene 29914 29988 . + . ID=gene-HMPREF2844_03905;Name=HMPREF2844_03905;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_03905 KV808200.1 tRNAscan-SE tRNA 29914 29988 . + . ID=rna-HMPREF2844_03905;Parent=gene-HMPREF2844_03905;anticodon=(pos:29947..29949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03905;product=tRNA-Glu KV808200.1 tRNAscan-SE exon 29914 29988 . + . ID=exon-HMPREF2844_03905-1;Parent=rna-HMPREF2844_03905;anticodon=(pos:29947..29949);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03905;product=tRNA-Glu KV808200.1 Genbank gene 30336 30869 . - . ID=gene-HMPREF2844_03910;Name=HMPREF2844_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03910 KV808200.1 Protein Homology CDS 30336 30869 . - 0 ID=cds-OFJ82240.1;Parent=gene-HMPREF2844_03910;Dbxref=NCBI_GP:OFJ82240.1;Name=OFJ82240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVG3.1;locus_tag=HMPREF2844_03910;product=inorganic pyrophosphatase;protein_id=OFJ82240.1;transl_table=11 KV808200.1 Genbank gene 31003 31452 . - . ID=gene-HMPREF2844_03915;Name=HMPREF2844_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03915 KV808200.1 Protein Homology CDS 31003 31452 . - 0 ID=cds-OFJ82241.1;Parent=gene-HMPREF2844_03915;Dbxref=NCBI_GP:OFJ82241.1;Name=OFJ82241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581850.1;locus_tag=HMPREF2844_03915;product=NUDIX pyrophosphatase;protein_id=OFJ82241.1;transl_table=11 KV808200.1 Genbank gene 31452 32831 . - . ID=gene-HMPREF2844_03920;Name=HMPREF2844_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03920 KV808200.1 Protein Homology CDS 31452 32831 . - 0 ID=cds-OFJ82249.1;Parent=gene-HMPREF2844_03920;Dbxref=NCBI_GP:OFJ82249.1;Name=OFJ82249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270491.1;locus_tag=HMPREF2844_03920;product=hypothetical protein;protein_id=OFJ82249.1;transl_table=11 KV808200.1 Genbank gene 33081 33157 . + . ID=gene-HMPREF2844_03925;Name=HMPREF2844_03925;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_03925 KV808200.1 tRNAscan-SE tRNA 33081 33157 . + . ID=rna-HMPREF2844_03925;Parent=gene-HMPREF2844_03925;anticodon=(pos:33115..33117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03925;product=tRNA-Pro KV808200.1 tRNAscan-SE exon 33081 33157 . + . ID=exon-HMPREF2844_03925-1;Parent=rna-HMPREF2844_03925;anticodon=(pos:33115..33117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_03925;product=tRNA-Pro KV808200.1 Genbank gene 33308 34531 . - . ID=gene-HMPREF2844_03930;Name=HMPREF2844_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03930 KV808200.1 Protein Homology CDS 33308 34531 . - 0 ID=cds-OFJ82242.1;Parent=gene-HMPREF2844_03930;Dbxref=NCBI_GP:OFJ82242.1;Name=OFJ82242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270492.1;locus_tag=HMPREF2844_03930;product=nicotinate phosphoribosyltransferase;protein_id=OFJ82242.1;transl_table=11 KV808200.1 Genbank gene 34670 36001 . - . ID=gene-HMPREF2844_03935;Name=HMPREF2844_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03935 KV808200.1 Protein Homology CDS 34670 36001 . - 0 ID=cds-OFJ82243.1;Parent=gene-HMPREF2844_03935;Dbxref=NCBI_GP:OFJ82243.1;Name=OFJ82243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687004.1;locus_tag=HMPREF2844_03935;product=branched-chain amino acid transporter II carrier protein;protein_id=OFJ82243.1;transl_table=11 KV808200.1 Genbank gene 36172 37059 . - . ID=gene-HMPREF2844_03940;Name=HMPREF2844_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03940 KV808200.1 Protein Homology CDS 36172 37059 . - 0 ID=cds-OFJ82244.1;Parent=gene-HMPREF2844_03940;Dbxref=NCBI_GP:OFJ82244.1;Name=OFJ82244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311982.1;locus_tag=HMPREF2844_03940;product=segregation and condensation protein A;protein_id=OFJ82244.1;transl_table=11 KV808200.1 Genbank pseudogene 37165 37623 . - . ID=gene-HMPREF2844_03945;Name=HMPREF2844_03945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_03945;pseudo=true KV808200.1 Protein Homology CDS 37165 37623 . - 0 ID=cds-HMPREF2844_03945;Parent=gene-HMPREF2844_03945;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311985.1;locus_tag=HMPREF2844_03945;product=hypothetical protein;pseudo=true;transl_table=11 KV808200.1 Genbank gene 37607 38401 . - . ID=gene-HMPREF2844_03950;Name=HMPREF2844_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03950 KV808200.1 Protein Homology CDS 37607 38401 . - 0 ID=cds-OFJ82245.1;Parent=gene-HMPREF2844_03950;Dbxref=NCBI_GP:OFJ82245.1;Name=OFJ82245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174045.1;locus_tag=HMPREF2844_03950;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=OFJ82245.1;transl_table=11 KV808200.1 Genbank gene 38595 39059 . + . ID=gene-HMPREF2844_03955;Name=HMPREF2844_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03955 KV808200.1 Protein Homology CDS 38595 39059 . + 0 ID=cds-OFJ82246.1;Parent=gene-HMPREF2844_03955;Dbxref=NCBI_GP:OFJ82246.1;Name=OFJ82246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713854.1;locus_tag=HMPREF2844_03955;product=universal stress protein;protein_id=OFJ82246.1;transl_table=11 KV808200.1 Genbank gene 39166 39654 . - . ID=gene-HMPREF2844_03960;Name=HMPREF2844_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03960 KV808200.1 Protein Homology CDS 39166 39654 . - 0 ID=cds-OFJ82247.1;Parent=gene-HMPREF2844_03960;Dbxref=NCBI_GP:OFJ82247.1;Name=OFJ82247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226109.1;locus_tag=HMPREF2844_03960;product=transposase;protein_id=OFJ82247.1;transl_table=11 KV808200.1 Genbank gene 39663 40013 . - . ID=gene-HMPREF2844_03965;Name=HMPREF2844_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03965 KV808200.1 Protein Homology CDS 39663 40013 . - 0 ID=cds-OFJ82248.1;Parent=gene-HMPREF2844_03965;Dbxref=NCBI_GP:OFJ82248.1;Name=OFJ82248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743648.1;locus_tag=HMPREF2844_03965;product=transposase;protein_id=OFJ82248.1;transl_table=11 ##sequence-region KV808201.1 1 29522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808201.1 Genbank region 1 29522 . + . ID=KV808201.1:1..29522;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808201.1 Genbank gene 236 1102 . + . ID=gene-HMPREF2844_03970;Name=HMPREF2844_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03970 KV808201.1 Protein Homology CDS 236 1102 . + 0 ID=cds-OFJ82031.1;Parent=gene-HMPREF2844_03970;Dbxref=NCBI_GP:OFJ82031.1;Name=OFJ82031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688345.1;locus_tag=HMPREF2844_03970;product=hypothetical protein;protein_id=OFJ82031.1;transl_table=11 KV808201.1 Genbank gene 1184 2725 . + . ID=gene-HMPREF2844_03975;Name=HMPREF2844_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03975 KV808201.1 Protein Homology CDS 1184 2725 . + 0 ID=cds-OFJ82032.1;Parent=gene-HMPREF2844_03975;Dbxref=NCBI_GP:OFJ82032.1;Name=OFJ82032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748574.1;locus_tag=HMPREF2844_03975;product=apolipoprotein N-acyltransferase;protein_id=OFJ82032.1;transl_table=11 KV808201.1 Genbank gene 2999 3862 . + . ID=gene-HMPREF2844_03980;Name=HMPREF2844_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03980 KV808201.1 Protein Homology CDS 2999 3862 . + 0 ID=cds-OFJ82033.1;Parent=gene-HMPREF2844_03980;Dbxref=NCBI_GP:OFJ82033.1;Name=OFJ82033.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581161.1;locus_tag=HMPREF2844_03980;product=RNA polymerase factor sigma-32;protein_id=OFJ82033.1;transl_table=11 KV808201.1 Genbank gene 3975 4421 . - . ID=gene-HMPREF2844_03985;Name=HMPREF2844_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03985 KV808201.1 Protein Homology CDS 3975 4421 . - 0 ID=cds-OFJ82034.1;Parent=gene-HMPREF2844_03985;Dbxref=NCBI_GP:OFJ82034.1;Name=OFJ82034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680927.1;locus_tag=HMPREF2844_03985;product=glutamyl-tRNA amidotransferase;protein_id=OFJ82034.1;transl_table=11 KV808201.1 Genbank gene 4591 4803 . - . ID=gene-HMPREF2844_03990;Name=HMPREF2844_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03990 KV808201.1 Protein Homology CDS 4591 4803 . - 0 ID=cds-OFJ82035.1;Parent=gene-HMPREF2844_03990;Dbxref=NCBI_GP:OFJ82035.1;Name=OFJ82035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66519.1;locus_tag=HMPREF2844_03990;product=30S ribosomal protein S21;protein_id=OFJ82035.1;transl_table=11 KV808201.1 Genbank gene 5165 5476 . + . ID=gene-HMPREF2844_03995;Name=HMPREF2844_03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_03995 KV808201.1 Protein Homology CDS 5165 5476 . + 0 ID=cds-OFJ82036.1;Parent=gene-HMPREF2844_03995;Dbxref=NCBI_GP:OFJ82036.1;Name=OFJ82036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214004.1;locus_tag=HMPREF2844_03995;product=monothiol glutaredoxin%2C Grx4 family;protein_id=OFJ82036.1;transl_table=11 KV808201.1 Genbank gene 5603 6229 . + . ID=gene-HMPREF2844_04000;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF2844_04000 KV808201.1 Protein Homology CDS 5603 6229 . + 0 ID=cds-OFJ82037.1;Parent=gene-HMPREF2844_04000;Dbxref=NCBI_GP:OFJ82037.1;Name=OFJ82037.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K048.1;locus_tag=HMPREF2844_04000;product=uracil phosphoribosyltransferase;protein_id=OFJ82037.1;transl_table=11 KV808201.1 Genbank gene 6492 6809 . + . ID=gene-HMPREF2844_04005;Name=HMPREF2844_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04005 KV808201.1 Protein Homology CDS 6492 6809 . + 0 ID=cds-OFJ82038.1;Parent=gene-HMPREF2844_04005;Dbxref=NCBI_GP:OFJ82038.1;Name=OFJ82038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449238.1;locus_tag=HMPREF2844_04005;product=hypothetical protein;protein_id=OFJ82038.1;transl_table=11 KV808201.1 Genbank gene 6948 7754 . + . ID=gene-HMPREF2844_04010;Name=HMPREF2844_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04010 KV808201.1 Protein Homology CDS 6948 7754 . + 0 ID=cds-OFJ82039.1;Parent=gene-HMPREF2844_04010;Dbxref=NCBI_GP:OFJ82039.1;Name=OFJ82039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575297.1;locus_tag=HMPREF2844_04010;product=phosphoribosylglycinamide formyltransferase;protein_id=OFJ82039.1;transl_table=11 KV808201.1 Genbank gene 7848 8408 . - . ID=gene-HMPREF2844_04015;Name=HMPREF2844_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04015 KV808201.1 Protein Homology CDS 7848 8408 . - 0 ID=cds-OFJ82057.1;Parent=gene-HMPREF2844_04015;Dbxref=NCBI_GP:OFJ82057.1;Name=OFJ82057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448741.1;locus_tag=HMPREF2844_04015;product=pseudouridine synthase;protein_id=OFJ82057.1;transl_table=11 KV808201.1 Genbank gene 8574 8666 . + . ID=gene-HMPREF2844_04020;Name=HMPREF2844_04020;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04020 KV808201.1 tRNAscan-SE tRNA 8574 8666 . + . ID=rna-HMPREF2844_04020;Parent=gene-HMPREF2844_04020;anticodon=(pos:8608..8610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04020;product=tRNA-Ser KV808201.1 tRNAscan-SE exon 8574 8666 . + . ID=exon-HMPREF2844_04020-1;Parent=rna-HMPREF2844_04020;anticodon=(pos:8608..8610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04020;product=tRNA-Ser KV808201.1 Genbank gene 9013 10860 . - . ID=gene-HMPREF2844_04025;Name=HMPREF2844_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04025 KV808201.1 Protein Homology CDS 9013 10860 . - 0 ID=cds-OFJ82040.1;Parent=gene-HMPREF2844_04025;Dbxref=NCBI_GP:OFJ82040.1;Name=OFJ82040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680925.1;locus_tag=HMPREF2844_04025;product=lytic murein transglycosylase;protein_id=OFJ82040.1;transl_table=11 KV808201.1 Genbank gene 11030 11590 . - . ID=gene-HMPREF2844_04030;Name=HMPREF2844_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04030 KV808201.1 Protein Homology CDS 11030 11590 . - 0 ID=cds-OFJ82041.1;Parent=gene-HMPREF2844_04030;Dbxref=NCBI_GP:OFJ82041.1;Name=OFJ82041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174001.1;locus_tag=HMPREF2844_04030;product=adenine phosphoribosyltransferase;protein_id=OFJ82041.1;transl_table=11 KV808201.1 Genbank gene 11743 12360 . + . ID=gene-HMPREF2844_04035;Name=HMPREF2844_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04035 KV808201.1 Protein Homology CDS 11743 12360 . + 0 ID=cds-OFJ82058.1;Parent=gene-HMPREF2844_04035;Dbxref=NCBI_GP:OFJ82058.1;Name=OFJ82058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JT96.1;locus_tag=HMPREF2844_04035;product=guanylate kinase;protein_id=OFJ82058.1;transl_table=11 KV808201.1 Genbank gene 12420 12623 . + . ID=gene-HMPREF2844_04040;Name=HMPREF2844_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04040 KV808201.1 Protein Homology CDS 12420 12623 . + 0 ID=cds-OFJ82042.1;Parent=gene-HMPREF2844_04040;Dbxref=NCBI_GP:OFJ82042.1;Name=OFJ82042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66724.1;locus_tag=HMPREF2844_04040;product=DNA-directed RNA polymerase subunit omega;protein_id=OFJ82042.1;transl_table=11 KV808201.1 Genbank gene 12735 14891 . + . ID=gene-HMPREF2844_04045;Name=HMPREF2844_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04045 KV808201.1 Protein Homology CDS 12735 14891 . + 0 ID=cds-OFJ82043.1;Parent=gene-HMPREF2844_04045;Dbxref=NCBI_GP:OFJ82043.1;Name=OFJ82043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234168.1;locus_tag=HMPREF2844_04045;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=OFJ82043.1;transl_table=11 KV808201.1 Genbank gene 15047 16027 . - . ID=gene-HMPREF2844_04050;Name=HMPREF2844_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04050 KV808201.1 Protein Homology CDS 15047 16027 . - 0 ID=cds-OFJ82044.1;Parent=gene-HMPREF2844_04050;Dbxref=NCBI_GP:OFJ82044.1;Name=OFJ82044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686258.1;locus_tag=HMPREF2844_04050;product=phosphate starvation-inducible protein PhoH;protein_id=OFJ82044.1;transl_table=11 KV808201.1 Genbank gene 16096 17769 . - . ID=gene-HMPREF2844_04055;Name=HMPREF2844_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04055 KV808201.1 Protein Homology CDS 16096 17769 . - 0 ID=cds-OFJ82045.1;Parent=gene-HMPREF2844_04055;Dbxref=NCBI_GP:OFJ82045.1;Name=OFJ82045.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740634.1;locus_tag=HMPREF2844_04055;product=long-chain fatty acid--CoA ligase;protein_id=OFJ82045.1;transl_table=11 KV808201.1 Genbank gene 17876 18979 . - . ID=gene-HMPREF2844_04060;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=HMPREF2844_04060 KV808201.1 Protein Homology CDS 17876 18979 . - 0 ID=cds-OFJ82046.1;Parent=gene-HMPREF2844_04060;Dbxref=NCBI_GP:OFJ82046.1;Name=OFJ82046.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312239.1;locus_tag=HMPREF2844_04060;product=tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase;protein_id=OFJ82046.1;transl_table=11 KV808201.1 Genbank gene 19181 19660 . - . ID=gene-HMPREF2844_04065;Name=HMPREF2844_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04065 KV808201.1 Protein Homology CDS 19181 19660 . - 0 ID=cds-OFJ82047.1;Parent=gene-HMPREF2844_04065;Dbxref=NCBI_GP:OFJ82047.1;Name=OFJ82047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212839.1;locus_tag=HMPREF2844_04065;product=hypothetical protein;protein_id=OFJ82047.1;transl_table=11 KV808201.1 Genbank gene 19860 20246 . - . ID=gene-HMPREF2844_04070;Name=HMPREF2844_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04070 KV808201.1 Protein Homology CDS 19860 20246 . - 0 ID=cds-OFJ82048.1;Parent=gene-HMPREF2844_04070;Dbxref=NCBI_GP:OFJ82048.1;Name=OFJ82048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756111.1;locus_tag=HMPREF2844_04070;product=diacylglycerol kinase;protein_id=OFJ82048.1;transl_table=11 KV808201.1 Genbank gene 20352 21308 . - . ID=gene-HMPREF2844_04075;Name=HMPREF2844_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04075 KV808201.1 Protein Homology CDS 20352 21308 . - 0 ID=cds-OFJ82049.1;Parent=gene-HMPREF2844_04075;Dbxref=NCBI_GP:OFJ82049.1;Name=OFJ82049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745922.1;locus_tag=HMPREF2844_04075;product=glutathione synthase;protein_id=OFJ82049.1;transl_table=11 KV808201.1 Genbank gene 21460 23121 . - . ID=gene-HMPREF2844_04080;Name=HMPREF2844_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04080 KV808201.1 Protein Homology CDS 21460 23121 . - 0 ID=cds-OFJ82050.1;Parent=gene-HMPREF2844_04080;Dbxref=NCBI_GP:OFJ82050.1;Name=OFJ82050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686276.1;locus_tag=HMPREF2844_04080;product=DNA repair protein RecN;protein_id=OFJ82050.1;transl_table=11 KV808201.1 Genbank gene 23381 24577 . - . ID=gene-HMPREF2844_04085;Name=HMPREF2844_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04085 KV808201.1 Protein Homology CDS 23381 24577 . - 0 ID=cds-OFJ82051.1;Parent=gene-HMPREF2844_04085;Dbxref=NCBI_GP:OFJ82051.1;Name=OFJ82051.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776902.1;locus_tag=HMPREF2844_04085;product=acetate kinase;protein_id=OFJ82051.1;transl_table=11 KV808201.1 Genbank gene 25101 25406 . + . ID=gene-HMPREF2844_04090;Name=HMPREF2844_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04090 KV808201.1 Protein Homology CDS 25101 25406 . + 0 ID=cds-OFJ82052.1;Parent=gene-HMPREF2844_04090;Dbxref=NCBI_GP:OFJ82052.1;Name=OFJ82052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520837.1;locus_tag=HMPREF2844_04090;product=hypothetical protein;protein_id=OFJ82052.1;transl_table=11 KV808201.1 Genbank gene 25406 25603 . + . ID=gene-HMPREF2844_04095;Name=HMPREF2844_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04095 KV808201.1 Protein Homology CDS 25406 25603 . + 0 ID=cds-OFJ82053.1;Parent=gene-HMPREF2844_04095;Dbxref=NCBI_GP:OFJ82053.1;Name=OFJ82053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744897.1;locus_tag=HMPREF2844_04095;product=cytochrome C oxidase Cbb3;protein_id=OFJ82053.1;transl_table=11 KV808201.1 Genbank gene 25600 26922 . + . ID=gene-HMPREF2844_04100;Name=HMPREF2844_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04100 KV808201.1 Protein Homology CDS 25600 26922 . + 0 ID=cds-OFJ82054.1;Parent=gene-HMPREF2844_04100;Dbxref=NCBI_GP:OFJ82054.1;Name=OFJ82054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764562.1;locus_tag=HMPREF2844_04100;product=hypothetical protein;protein_id=OFJ82054.1;transl_table=11 KV808201.1 Genbank gene 27143 28270 . - . ID=gene-HMPREF2844_04105;Name=HMPREF2844_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04105 KV808201.1 Protein Homology CDS 27143 28270 . - 0 ID=cds-OFJ82055.1;Parent=gene-HMPREF2844_04105;Dbxref=NCBI_GP:OFJ82055.1;Name=OFJ82055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679020.1;locus_tag=HMPREF2844_04105;product=hypothetical protein;protein_id=OFJ82055.1;transl_table=11 KV808201.1 Genbank gene 28351 29232 . - . ID=gene-HMPREF2844_04110;Name=HMPREF2844_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04110 KV808201.1 Protein Homology CDS 28351 29232 . - 0 ID=cds-OFJ82056.1;Parent=gene-HMPREF2844_04110;Dbxref=NCBI_GP:OFJ82056.1;Name=OFJ82056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688365.1;locus_tag=HMPREF2844_04110;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=OFJ82056.1;transl_table=11 ##sequence-region KV808202.1 1 707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808202.1 Genbank region 1 707 . + . ID=KV808202.1:1..707;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808202.1 Genbank pseudogene 1 248 . + . ID=gene-HMPREF2844_04115;Name=HMPREF2844_04115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04115;pseudo=true KV808202.1 Protein Homology CDS 1 248 . + 2 ID=cds-HMPREF2844_04115;Parent=gene-HMPREF2844_04115;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756627.1;locus_tag=HMPREF2844_04115;product=phosphoesterase;pseudo=true;transl_table=11 KV808202.1 Genbank gene 463 705 . - . ID=gene-HMPREF2844_04120;Name=HMPREF2844_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04120 KV808202.1 Protein Homology CDS 463 705 . - 0 ID=cds-OFJ81376.1;Parent=gene-HMPREF2844_04120;Dbxref=NCBI_GP:OFJ81376.1;Name=OFJ81376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679538.1;locus_tag=HMPREF2844_04120;product=transposase;protein_id=OFJ81376.1;transl_table=11 ##sequence-region KV808203.1 1 30917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808203.1 Genbank region 1 30917 . + . ID=KV808203.1:1..30917;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808203.1 Genbank pseudogene 1 115 . - . ID=gene-HMPREF2844_04125;Name=HMPREF2844_04125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04125;pseudo=true KV808203.1 Protein Homology CDS 1 115 . - 0 ID=cds-HMPREF2844_04125;Parent=gene-HMPREF2844_04125;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252421.1;locus_tag=HMPREF2844_04125;product=elongation factor Tu;pseudo=true;transl_table=11 KV808203.1 Genbank gene 156 230 . - . ID=gene-HMPREF2844_04130;Name=HMPREF2844_04130;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04130 KV808203.1 tRNAscan-SE tRNA 156 230 . - . ID=rna-HMPREF2844_04130;Parent=gene-HMPREF2844_04130;anticodon=(pos:complement(196..198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04130;product=tRNA-Thr KV808203.1 tRNAscan-SE exon 156 230 . - . ID=exon-HMPREF2844_04130-1;Parent=rna-HMPREF2844_04130;anticodon=(pos:complement(196..198));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04130;product=tRNA-Thr KV808203.1 Genbank gene 242 315 . - . ID=gene-HMPREF2844_04135;Name=HMPREF2844_04135;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04135 KV808203.1 tRNAscan-SE tRNA 242 315 . - . ID=rna-HMPREF2844_04135;Parent=gene-HMPREF2844_04135;anticodon=(pos:complement(281..283));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04135;product=tRNA-Gly KV808203.1 tRNAscan-SE exon 242 315 . - . ID=exon-HMPREF2844_04135-1;Parent=rna-HMPREF2844_04135;anticodon=(pos:complement(281..283));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04135;product=tRNA-Gly KV808203.1 Genbank gene 352 435 . - . ID=gene-HMPREF2844_04140;Name=HMPREF2844_04140;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04140 KV808203.1 tRNAscan-SE tRNA 352 435 . - . ID=rna-HMPREF2844_04140;Parent=gene-HMPREF2844_04140;anticodon=(pos:complement(399..401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04140;product=tRNA-Tyr KV808203.1 tRNAscan-SE exon 352 435 . - . ID=exon-HMPREF2844_04140-1;Parent=rna-HMPREF2844_04140;anticodon=(pos:complement(399..401));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04140;product=tRNA-Tyr KV808203.1 Genbank gene 535 786 . - . ID=gene-HMPREF2844_04145;Name=HMPREF2844_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04145 KV808203.1 Protein Homology CDS 535 786 . - 0 ID=cds-OFJ81067.1;Parent=gene-HMPREF2844_04145;Dbxref=NCBI_GP:OFJ81067.1;Name=OFJ81067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215364.1;locus_tag=HMPREF2844_04145;product=ferredoxin;protein_id=OFJ81067.1;transl_table=11 KV808203.1 Genbank gene 908 1474 . - . ID=gene-HMPREF2844_04150;Name=HMPREF2844_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04150 KV808203.1 Protein Homology CDS 908 1474 . - 0 ID=cds-OFJ81068.1;Parent=gene-HMPREF2844_04150;Dbxref=NCBI_GP:OFJ81068.1;Name=OFJ81068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271675.1;locus_tag=HMPREF2844_04150;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=OFJ81068.1;transl_table=11 KV808203.1 Genbank gene 1745 1966 . + . ID=gene-HMPREF2844_04155;Name=HMPREF2844_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04155 KV808203.1 Protein Homology CDS 1745 1966 . + 0 ID=cds-OFJ81069.1;Parent=gene-HMPREF2844_04155;Dbxref=NCBI_GP:OFJ81069.1;Name=OFJ81069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742639.1;locus_tag=HMPREF2844_04155;product=hypothetical protein;protein_id=OFJ81069.1;transl_table=11 KV808203.1 Genbank gene 2159 2851 . + . ID=gene-HMPREF2844_04160;Name=HMPREF2844_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04160 KV808203.1 Protein Homology CDS 2159 2851 . + 0 ID=cds-OFJ81070.1;Parent=gene-HMPREF2844_04160;Dbxref=NCBI_GP:OFJ81070.1;Name=OFJ81070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677936.1;locus_tag=HMPREF2844_04160;product=hypothetical protein;protein_id=OFJ81070.1;transl_table=11 KV808203.1 Genbank gene 2926 5232 . - . ID=gene-HMPREF2844_04165;Name=HMPREF2844_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04165 KV808203.1 Protein Homology CDS 2926 5232 . - 0 ID=cds-OFJ81071.1;Parent=gene-HMPREF2844_04165;Dbxref=NCBI_GP:OFJ81071.1;Name=OFJ81071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016670597.1;locus_tag=HMPREF2844_04165;product=DNA topoisomerase I;protein_id=OFJ81071.1;transl_table=11 KV808203.1 Genbank gene 5317 5772 . - . ID=gene-HMPREF2844_04170;Name=HMPREF2844_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04170 KV808203.1 Protein Homology CDS 5317 5772 . - 0 ID=cds-OFJ81072.1;Parent=gene-HMPREF2844_04170;Dbxref=NCBI_GP:OFJ81072.1;Name=OFJ81072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003690295.1;locus_tag=HMPREF2844_04170;product=hypothetical protein;protein_id=OFJ81072.1;transl_table=11 KV808203.1 Genbank gene 5798 7018 . - . ID=gene-HMPREF2844_04175;Name=HMPREF2844_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04175 KV808203.1 Protein Homology CDS 5798 7018 . - 0 ID=cds-OFJ81073.1;Parent=gene-HMPREF2844_04175;Dbxref=NCBI_GP:OFJ81073.1;Name=OFJ81073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679496.1;locus_tag=HMPREF2844_04175;product=DNA processing protein DprA;protein_id=OFJ81073.1;transl_table=11 KV808203.1 Genbank gene 7450 8733 . - . ID=gene-HMPREF2844_04180;Name=HMPREF2844_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04180 KV808203.1 Protein Homology CDS 7450 8733 . - 0 ID=cds-OFJ81074.1;Parent=gene-HMPREF2844_04180;Dbxref=NCBI_GP:OFJ81074.1;Name=OFJ81074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763191.1;locus_tag=HMPREF2844_04180;product=transcriptional regulator;protein_id=OFJ81074.1;transl_table=11 KV808203.1 Genbank gene 8726 10849 . - . ID=gene-HMPREF2844_04185;Name=HMPREF2844_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04185 KV808203.1 Protein Homology CDS 8726 10849 . - 0 ID=cds-OFJ81075.1;Parent=gene-HMPREF2844_04185;Dbxref=NCBI_GP:OFJ81075.1;Name=OFJ81075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679493.1;locus_tag=HMPREF2844_04185;product=PAS domain-containing sensor histidine kinase;protein_id=OFJ81075.1;transl_table=11 KV808203.1 Genbank gene 10853 11446 . - . ID=gene-HMPREF2844_04190;Name=HMPREF2844_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04190 KV808203.1 Protein Homology CDS 10853 11446 . - 0 ID=cds-OFJ81076.1;Parent=gene-HMPREF2844_04190;Dbxref=NCBI_GP:OFJ81076.1;Name=OFJ81076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749237.1;locus_tag=HMPREF2844_04190;product=hypothetical protein;protein_id=OFJ81076.1;transl_table=11 KV808203.1 Genbank gene 11412 12671 . - . ID=gene-HMPREF2844_04195;Name=HMPREF2844_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04195 KV808203.1 Protein Homology CDS 11412 12671 . - 0 ID=cds-OFJ81077.1;Parent=gene-HMPREF2844_04195;Dbxref=NCBI_GP:OFJ81077.1;Name=OFJ81077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520179.1;locus_tag=HMPREF2844_04195;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=OFJ81077.1;transl_table=11 KV808203.1 Genbank gene 12844 13128 . + . ID=gene-HMPREF2844_04200;Name=HMPREF2844_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04200 KV808203.1 Protein Homology CDS 12844 13128 . + 0 ID=cds-OFJ81078.1;Parent=gene-HMPREF2844_04200;Dbxref=NCBI_GP:OFJ81078.1;Name=OFJ81078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760535.1;locus_tag=HMPREF2844_04200;product=peptidase;protein_id=OFJ81078.1;transl_table=11 KV808203.1 Genbank gene 13257 13778 . - . ID=gene-HMPREF2844_04205;Name=HMPREF2844_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04205 KV808203.1 Protein Homology CDS 13257 13778 . - 0 ID=cds-OFJ81079.1;Parent=gene-HMPREF2844_04205;Dbxref=NCBI_GP:OFJ81079.1;Name=OFJ81079.1;Note=interacts and inactivates RNase III during cold shock;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688301.1;locus_tag=HMPREF2844_04205;product=RNase III inhibitor;protein_id=OFJ81079.1;transl_table=11 KV808203.1 Genbank gene 13912 14838 . - . ID=gene-HMPREF2844_04210;Name=HMPREF2844_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04210 KV808203.1 Protein Homology CDS 13912 14838 . - 0 ID=cds-OFJ81080.1;Parent=gene-HMPREF2844_04210;Dbxref=NCBI_GP:OFJ81080.1;Name=OFJ81080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A9M463.1;locus_tag=HMPREF2844_04210;product=methionyl-tRNA formyltransferase;protein_id=OFJ81080.1;transl_table=11 KV808203.1 Genbank gene 14984 15487 . - . ID=gene-HMPREF2844_04215;Name=HMPREF2844_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04215 KV808203.1 Protein Homology CDS 14984 15487 . - 0 ID=cds-OFJ81081.1;Parent=gene-HMPREF2844_04215;Dbxref=NCBI_GP:OFJ81081.1;Name=OFJ81081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312688.1;locus_tag=HMPREF2844_04215;product=peptide deformylase;protein_id=OFJ81081.1;transl_table=11 KV808203.1 Genbank gene 15768 17048 . + . ID=gene-HMPREF2844_04220;Name=HMPREF2844_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04220 KV808203.1 Protein Homology CDS 15768 17048 . + 0 ID=cds-OFJ81082.1;Parent=gene-HMPREF2844_04220;Dbxref=NCBI_GP:OFJ81082.1;Name=OFJ81082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688304.1;locus_tag=HMPREF2844_04220;product=peptidoglycan-binding protein LysM;protein_id=OFJ81082.1;transl_table=11 KV808203.1 Genbank gene 17437 18057 . - . ID=gene-HMPREF2844_04225;Name=HMPREF2844_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04225 KV808203.1 Protein Homology CDS 17437 18057 . - 0 ID=cds-OFJ81083.1;Parent=gene-HMPREF2844_04225;Dbxref=NCBI_GP:OFJ81083.1;Name=OFJ81083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776288.1;locus_tag=HMPREF2844_04225;product=nucleoside-diphosphate sugar epimerase;protein_id=OFJ81083.1;transl_table=11 KV808203.1 Genbank gene 18337 18534 . + . ID=gene-HMPREF2844_04230;Name=HMPREF2844_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04230 KV808203.1 GeneMarkS+ CDS 18337 18534 . + 0 ID=cds-OFJ81084.1;Parent=gene-HMPREF2844_04230;Dbxref=NCBI_GP:OFJ81084.1;Name=OFJ81084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_04230;product=hypothetical protein;protein_id=OFJ81084.1;transl_table=11 KV808203.1 Genbank pseudogene 18831 19013 . + . ID=gene-HMPREF2844_04235;Name=HMPREF2844_04235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04235;pseudo=true KV808203.1 GeneMarkS+ CDS 18831 19013 . + 0 ID=cds-HMPREF2844_04235;Parent=gene-HMPREF2844_04235;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_04235;product=hypothetical protein;pseudo=true;transl_table=11 KV808203.1 Genbank gene 19010 20830 . - . ID=gene-HMPREF2844_04240;Name=HMPREF2844_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04240 KV808203.1 Protein Homology CDS 19010 20830 . - 0 ID=cds-OFJ81062.1;Parent=gene-HMPREF2844_04240;Dbxref=NCBI_GP:OFJ81062.1;Name=OFJ81062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680368.1;locus_tag=HMPREF2844_04240;product=putative heme utilization radical SAM enzyme HutW;protein_id=OFJ81062.1;transl_table=11 KV808203.1 Genbank gene 21179 23383 . - . ID=gene-HMPREF2844_04245;Name=HMPREF2844_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04245 KV808203.1 Protein Homology CDS 21179 23383 . - 0 ID=cds-OFJ81063.1;Parent=gene-HMPREF2844_04245;Dbxref=NCBI_GP:OFJ81063.1;Name=OFJ81063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686325.1;locus_tag=HMPREF2844_04245;product=TonB-dependent receptor;protein_id=OFJ81063.1;transl_table=11 KV808203.1 Genbank gene 23582 24511 . - . ID=gene-HMPREF2844_04250;Name=HMPREF2844_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04250 KV808203.1 Protein Homology CDS 23582 24511 . - 0 ID=cds-OFJ81064.1;Parent=gene-HMPREF2844_04250;Dbxref=NCBI_GP:OFJ81064.1;Name=OFJ81064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464452.1;locus_tag=HMPREF2844_04250;product=polyphosphate kinase 2;protein_id=OFJ81064.1;transl_table=11 KV808203.1 Genbank gene 24679 26577 . + . ID=gene-HMPREF2844_04255;Name=HMPREF2844_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04255 KV808203.1 Protein Homology CDS 24679 26577 . + 0 ID=cds-OFJ81065.1;Parent=gene-HMPREF2844_04255;Dbxref=NCBI_GP:OFJ81065.1;Name=OFJ81065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688309.1;locus_tag=HMPREF2844_04255;product=aminobenzoate synthetase;protein_id=OFJ81065.1;transl_table=11 KV808203.1 Genbank gene 26639 28090 . - . ID=gene-HMPREF2844_04260;Name=HMPREF2844_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04260 KV808203.1 Protein Homology CDS 26639 28090 . - 0 ID=cds-OFJ81066.1;Parent=gene-HMPREF2844_04260;Dbxref=NCBI_GP:OFJ81066.1;Name=OFJ81066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755754.1;locus_tag=HMPREF2844_04260;product=hypothetical protein;protein_id=OFJ81066.1;transl_table=11 KV808203.1 Genbank gene 29069 29305 . + . ID=gene-HMPREF2844_04265;Name=HMPREF2844_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04265 KV808203.1 Protein Homology CDS 29069 29305 . + 0 ID=cds-OFJ81059.1;Parent=gene-HMPREF2844_04265;Dbxref=NCBI_GP:OFJ81059.1;Name=OFJ81059.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272337.1;locus_tag=HMPREF2844_04265;product=acyl carrier protein;protein_id=OFJ81059.1;transl_table=11 KV808203.1 Genbank gene 29482 30729 . + . ID=gene-HMPREF2844_04270;Name=HMPREF2844_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04270 KV808203.1 Protein Homology CDS 29482 30729 . + 0 ID=cds-OFJ81060.1;Parent=gene-HMPREF2844_04270;Dbxref=NCBI_GP:OFJ81060.1;Name=OFJ81060.1;Note=FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768942.1;locus_tag=HMPREF2844_04270;product=beta-ketoacyl-[acyl-carrier-protein] synthase II;protein_id=OFJ81060.1;transl_table=11 ##sequence-region KV808204.1 1 2825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808204.1 Genbank region 1 2825 . + . ID=KV808204.1:1..2825;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808204.1 Genbank gene 185 514 . - . ID=gene-HMPREF2844_04275;Name=HMPREF2844_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04275 KV808204.1 Protein Homology CDS 185 514 . - 0 ID=cds-OFJ81045.1;Parent=gene-HMPREF2844_04275;Dbxref=NCBI_GP:OFJ81045.1;Name=OFJ81045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P56989.1;locus_tag=HMPREF2844_04275;product=peptidylprolyl isomerase;protein_id=OFJ81045.1;transl_table=11 KV808204.1 Genbank gene 679 939 . - . ID=gene-HMPREF2844_04280;Name=HMPREF2844_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04280 KV808204.1 Protein Homology CDS 679 939 . - 0 ID=cds-OFJ81046.1;Parent=gene-HMPREF2844_04280;Dbxref=NCBI_GP:OFJ81046.1;Name=OFJ81046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687092.1;locus_tag=HMPREF2844_04280;product=hypothetical protein;protein_id=OFJ81046.1;transl_table=11 KV808204.1 Genbank gene 1112 1330 . - . ID=gene-HMPREF2844_04285;Name=HMPREF2844_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04285 KV808204.1 Protein Homology CDS 1112 1330 . - 0 ID=cds-OFJ81047.1;Parent=gene-HMPREF2844_04285;Dbxref=NCBI_GP:OFJ81047.1;Name=OFJ81047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269788.1;locus_tag=HMPREF2844_04285;product=hypothetical protein;protein_id=OFJ81047.1;transl_table=11 KV808204.1 Genbank gene 1621 2571 . + . ID=gene-HMPREF2844_04290;Name=HMPREF2844_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04290 KV808204.1 Protein Homology CDS 1621 2571 . + 0 ID=cds-OFJ81044.1;Parent=gene-HMPREF2844_04290;Dbxref=NCBI_GP:OFJ81044.1;Name=OFJ81044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002228827.1;locus_tag=HMPREF2844_04290;product=hydroxyacid dehydrogenase;protein_id=OFJ81044.1;transl_table=11 ##sequence-region KV808205.1 1 4853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808205.1 Genbank region 1 4853 . + . ID=KV808205.1:1..4853;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808205.1 Genbank gene 1 201 . + . ID=gene-HMPREF2844_04295;Name=HMPREF2844_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04295;partial=true;start_range=.,1 KV808205.1 Protein Homology CDS 1 201 . + 0 ID=cds-OFJ81025.1;Parent=gene-HMPREF2844_04295;Dbxref=NCBI_GP:OFJ81025.1;Name=OFJ81025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778825.1;locus_tag=HMPREF2844_04295;partial=true;product=hypothetical protein;protein_id=OFJ81025.1;start_range=.,1;transl_table=11 KV808205.1 Genbank gene 195 1883 . - . ID=gene-HMPREF2844_04300;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=HMPREF2844_04300 KV808205.1 Protein Homology CDS 195 1883 . - 0 ID=cds-OFJ81026.1;Parent=gene-HMPREF2844_04300;Dbxref=NCBI_GP:OFJ81026.1;Name=OFJ81026.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019518933.1;locus_tag=HMPREF2844_04300;product=cation acetate symporter;protein_id=OFJ81026.1;transl_table=11 KV808205.1 Genbank gene 1994 2356 . - . ID=gene-HMPREF2844_04305;Name=HMPREF2844_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04305 KV808205.1 Protein Homology CDS 1994 2356 . - 0 ID=cds-OFJ81027.1;Parent=gene-HMPREF2844_04305;Dbxref=NCBI_GP:OFJ81027.1;Name=OFJ81027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755165.1;locus_tag=HMPREF2844_04305;product=hypothetical protein;protein_id=OFJ81027.1;transl_table=11 KV808205.1 Genbank gene 2713 3609 . + . ID=gene-HMPREF2844_04310;Name=HMPREF2844_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04310 KV808205.1 Protein Homology CDS 2713 3609 . + 0 ID=cds-OFJ81028.1;Parent=gene-HMPREF2844_04310;Dbxref=NCBI_GP:OFJ81028.1;Name=OFJ81028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755169.1;locus_tag=HMPREF2844_04310;product=transcriptional regulator;protein_id=OFJ81028.1;transl_table=11 KV808205.1 Genbank pseudogene 3649 4357 . - . ID=gene-HMPREF2844_04315;Name=HMPREF2844_04315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04315;pseudo=true KV808205.1 Protein Homology CDS 3649 4357 . - 0 ID=cds-HMPREF2844_04315;Parent=gene-HMPREF2844_04315;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271100.1;locus_tag=HMPREF2844_04315;product=hypothetical protein;pseudo=true;transl_table=11 KV808205.1 Genbank pseudogene 4406 4819 . + . ID=gene-HMPREF2844_04320;Name=HMPREF2844_04320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04320;pseudo=true KV808205.1 Protein Homology CDS 4406 4819 . + 0 ID=cds-HMPREF2844_04320;Parent=gene-HMPREF2844_04320;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774023.1;locus_tag=HMPREF2844_04320;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808206.1 1 8159 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808206.1 Genbank region 1 8159 . + . ID=KV808206.1:1..8159;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808206.1 Genbank gene 114 2129 . - . ID=gene-HMPREF2844_04325;Name=HMPREF2844_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04325 KV808206.1 Protein Homology CDS 114 2129 . - 0 ID=cds-OFJ81019.1;Parent=gene-HMPREF2844_04325;Dbxref=NCBI_GP:OFJ81019.1;Name=OFJ81019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239320.1;locus_tag=HMPREF2844_04325;product=prolyl endopeptidase;protein_id=OFJ81019.1;transl_table=11 KV808206.1 Genbank gene 2402 4486 . - . ID=gene-HMPREF2844_04330;Name=HMPREF2844_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04330 KV808206.1 Protein Homology CDS 2402 4486 . - 0 ID=cds-OFJ81020.1;Parent=gene-HMPREF2844_04330;Dbxref=NCBI_GP:OFJ81020.1;Name=OFJ81020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312581.1;locus_tag=HMPREF2844_04330;product=hypothetical protein;protein_id=OFJ81020.1;transl_table=11 KV808206.1 Genbank gene 4899 5705 . - . ID=gene-HMPREF2844_04335;Name=HMPREF2844_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04335 KV808206.1 Protein Homology CDS 4899 5705 . - 0 ID=cds-OFJ81021.1;Parent=gene-HMPREF2844_04335;Dbxref=NCBI_GP:OFJ81021.1;Name=OFJ81021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270762.1;locus_tag=HMPREF2844_04335;product=ATP-dependent DNA ligase;protein_id=OFJ81021.1;transl_table=11 KV808206.1 Genbank gene 5835 6467 . + . ID=gene-HMPREF2844_04340;Name=HMPREF2844_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04340 KV808206.1 Protein Homology CDS 5835 6467 . + 0 ID=cds-OFJ81022.1;Parent=gene-HMPREF2844_04340;Dbxref=NCBI_GP:OFJ81022.1;Name=OFJ81022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448338.1;locus_tag=HMPREF2844_04340;product=hypothetical protein;protein_id=OFJ81022.1;transl_table=11 KV808206.1 Genbank gene 6804 7328 . + . ID=gene-HMPREF2844_04345;Name=HMPREF2844_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04345 KV808206.1 Protein Homology CDS 6804 7328 . + 0 ID=cds-OFJ81023.1;Parent=gene-HMPREF2844_04345;Dbxref=NCBI_GP:OFJ81023.1;Name=OFJ81023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426477.1;locus_tag=HMPREF2844_04345;product=cell envelope protein SmpA;protein_id=OFJ81023.1;transl_table=11 KV808206.1 Genbank gene 7338 7769 . + . ID=gene-HMPREF2844_04350;Name=HMPREF2844_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04350 KV808206.1 Protein Homology CDS 7338 7769 . + 0 ID=cds-OFJ81024.1;Parent=gene-HMPREF2844_04350;Dbxref=NCBI_GP:OFJ81024.1;Name=OFJ81024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743152.1;locus_tag=HMPREF2844_04350;product=hypothetical protein;protein_id=OFJ81024.1;transl_table=11 ##sequence-region KV808207.1 1 46178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808207.1 Genbank region 1 46178 . + . ID=KV808207.1:1..46178;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808207.1 Genbank gene 171 1046 . + . ID=gene-HMPREF2844_04355;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=HMPREF2844_04355 KV808207.1 Protein Homology CDS 171 1046 . + 0 ID=cds-OFJ80870.1;Parent=gene-HMPREF2844_04355;Dbxref=NCBI_GP:OFJ80870.1;Name=OFJ80870.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270575.1;locus_tag=HMPREF2844_04355;product=site-specific tyrosine recombinase XerD;protein_id=OFJ80870.1;transl_table=11 KV808207.1 Genbank gene 1294 1494 . + . ID=gene-HMPREF2844_04360;Name=HMPREF2844_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04360 KV808207.1 Protein Homology CDS 1294 1494 . + 0 ID=cds-OFJ80871.1;Parent=gene-HMPREF2844_04360;Dbxref=NCBI_GP:OFJ80871.1;Name=OFJ80871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677538.1;locus_tag=HMPREF2844_04360;product=bacterioferritin;protein_id=OFJ80871.1;transl_table=11 KV808207.1 Genbank gene 1658 1912 . + . ID=gene-HMPREF2844_04365;Name=HMPREF2844_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04365 KV808207.1 Protein Homology CDS 1658 1912 . + 0 ID=cds-OFJ80872.1;Parent=gene-HMPREF2844_04365;Dbxref=NCBI_GP:OFJ80872.1;Name=OFJ80872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686531.1;locus_tag=HMPREF2844_04365;product=glutaredoxin;protein_id=OFJ80872.1;transl_table=11 KV808207.1 Genbank gene 2447 3310 . - . ID=gene-HMPREF2844_04370;Name=HMPREF2844_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04370 KV808207.1 Protein Homology CDS 2447 3310 . - 0 ID=cds-OFJ80873.1;Parent=gene-HMPREF2844_04370;Dbxref=NCBI_GP:OFJ80873.1;Name=OFJ80873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761441.1;locus_tag=HMPREF2844_04370;product=NAD(P)-dependent oxidoreductase;protein_id=OFJ80873.1;transl_table=11 KV808207.1 Genbank gene 3861 4316 . - . ID=gene-HMPREF2844_04375;Name=HMPREF2844_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04375 KV808207.1 Protein Homology CDS 3861 4316 . - 0 ID=cds-OFJ80874.1;Parent=gene-HMPREF2844_04375;Dbxref=NCBI_GP:OFJ80874.1;Name=OFJ80874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270579.1;locus_tag=HMPREF2844_04375;product=hypothetical protein;protein_id=OFJ80874.1;transl_table=11 KV808207.1 Genbank gene 4359 5207 . + . ID=gene-HMPREF2844_04380;Name=HMPREF2844_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04380 KV808207.1 Protein Homology CDS 4359 5207 . + 0 ID=cds-OFJ80875.1;Parent=gene-HMPREF2844_04380;Dbxref=NCBI_GP:OFJ80875.1;Name=OFJ80875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686527.1;locus_tag=HMPREF2844_04380;product=calcium-binding protein;protein_id=OFJ80875.1;transl_table=11 KV808207.1 Genbank gene 5378 6244 . + . ID=gene-HMPREF2844_04385;Name=HMPREF2844_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04385 KV808207.1 Protein Homology CDS 5378 6244 . + 0 ID=cds-OFJ80876.1;Parent=gene-HMPREF2844_04385;Dbxref=NCBI_GP:OFJ80876.1;Name=OFJ80876.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270581.1;locus_tag=HMPREF2844_04385;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=OFJ80876.1;transl_table=11 KV808207.1 Genbank gene 6481 8601 . + . ID=gene-HMPREF2844_04390;Name=HMPREF2844_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04390 KV808207.1 Protein Homology CDS 6481 8601 . + 0 ID=cds-OFJ80877.1;Parent=gene-HMPREF2844_04390;Dbxref=NCBI_GP:OFJ80877.1;Name=OFJ80877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312233.1;locus_tag=HMPREF2844_04390;product=polyribonucleotide nucleotidyltransferase;protein_id=OFJ80877.1;transl_table=11 KV808207.1 Genbank gene 8836 9312 . - . ID=gene-HMPREF2844_04395;Name=HMPREF2844_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04395 KV808207.1 Protein Homology CDS 8836 9312 . - 0 ID=cds-OFJ80878.1;Parent=gene-HMPREF2844_04395;Dbxref=NCBI_GP:OFJ80878.1;Name=OFJ80878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686342.1;locus_tag=HMPREF2844_04395;product=transcription elongation factor GreA;protein_id=OFJ80878.1;transl_table=11 KV808207.1 Genbank gene 9509 12649 . - . ID=gene-HMPREF2844_04400;Name=HMPREF2844_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04400 KV808207.1 Protein Homology CDS 9509 12649 . - 0 ID=cds-OFJ80879.1;Parent=gene-HMPREF2844_04400;Dbxref=NCBI_GP:OFJ80879.1;Name=OFJ80879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271379.1;locus_tag=HMPREF2844_04400;product=cell division protein FtsK;protein_id=OFJ80879.1;transl_table=11 KV808207.1 Genbank gene 12798 13475 . + . ID=gene-HMPREF2844_04405;Name=HMPREF2844_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04405 KV808207.1 Protein Homology CDS 12798 13475 . + 0 ID=cds-OFJ80880.1;Parent=gene-HMPREF2844_04405;Dbxref=NCBI_GP:OFJ80880.1;Name=OFJ80880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742683.1;locus_tag=HMPREF2844_04405;product=hypothetical protein;protein_id=OFJ80880.1;transl_table=11 KV808207.1 Genbank gene 13533 15305 . - . ID=gene-HMPREF2844_04410;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=HMPREF2844_04410 KV808207.1 Protein Homology CDS 13533 15305 . - 0 ID=cds-OFJ80881.1;Parent=gene-HMPREF2844_04410;Dbxref=NCBI_GP:OFJ80881.1;Name=OFJ80881.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311694.1;locus_tag=HMPREF2844_04410;product=sulfite reductase subunit alpha;protein_id=OFJ80881.1;transl_table=11 KV808207.1 Genbank gene 15818 17200 . - . ID=gene-HMPREF2844_04415;Name=HMPREF2844_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04415 KV808207.1 Protein Homology CDS 15818 17200 . - 0 ID=cds-OFJ80882.1;Parent=gene-HMPREF2844_04415;Dbxref=NCBI_GP:OFJ80882.1;Name=OFJ80882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213982.1;locus_tag=HMPREF2844_04415;product=phosphoglucomutase;protein_id=OFJ80882.1;transl_table=11 KV808207.1 Genbank gene 17322 18161 . - . ID=gene-HMPREF2844_04420;Name=HMPREF2844_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04420 KV808207.1 Protein Homology CDS 17322 18161 . - 0 ID=cds-OFJ80883.1;Parent=gene-HMPREF2844_04420;Dbxref=NCBI_GP:OFJ80883.1;Name=OFJ80883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311498.1;locus_tag=HMPREF2844_04420;product=hypothetical protein;protein_id=OFJ80883.1;transl_table=11 KV808207.1 Genbank gene 18304 18738 . - . ID=gene-HMPREF2844_04425;Name=HMPREF2844_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04425 KV808207.1 Protein Homology CDS 18304 18738 . - 0 ID=cds-OFJ80884.1;Parent=gene-HMPREF2844_04425;Dbxref=NCBI_GP:OFJ80884.1;Name=OFJ80884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235815.1;locus_tag=HMPREF2844_04425;product=hypothetical protein;protein_id=OFJ80884.1;transl_table=11 KV808207.1 Genbank gene 18731 20038 . - . ID=gene-HMPREF2844_04430;Name=HMPREF2844_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04430 KV808207.1 Protein Homology CDS 18731 20038 . - 0 ID=cds-OFJ80885.1;Parent=gene-HMPREF2844_04430;Dbxref=NCBI_GP:OFJ80885.1;Name=OFJ80885.1;Note=catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520380.1;locus_tag=HMPREF2844_04430;product=homoserine dehydrogenase;protein_id=OFJ80885.1;transl_table=11 KV808207.1 Genbank gene 20281 20655 . + . ID=gene-HMPREF2844_04435;Name=HMPREF2844_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04435 KV808207.1 Protein Homology CDS 20281 20655 . + 0 ID=cds-OFJ80886.1;Parent=gene-HMPREF2844_04435;Dbxref=NCBI_GP:OFJ80886.1;Name=OFJ80886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755298.1;locus_tag=HMPREF2844_04435;product=rod shape-determining protein RodA;protein_id=OFJ80886.1;transl_table=11 KV808207.1 Genbank gene 20805 21299 . + . ID=gene-HMPREF2844_04440;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=HMPREF2844_04440 KV808207.1 Protein Homology CDS 20805 21299 . + 0 ID=cds-OFJ80887.1;Parent=gene-HMPREF2844_04440;Dbxref=NCBI_GP:OFJ80887.1;Name=OFJ80887.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003447601.1;locus_tag=HMPREF2844_04440;product=2-Cys peroxiredoxin;protein_id=OFJ80887.1;transl_table=11 KV808207.1 Genbank gene 21532 22437 . - . ID=gene-HMPREF2844_04445;Name=HMPREF2844_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04445 KV808207.1 Protein Homology CDS 21532 22437 . - 0 ID=cds-OFJ80888.1;Parent=gene-HMPREF2844_04445;Dbxref=NCBI_GP:OFJ80888.1;Name=OFJ80888.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270924.1;locus_tag=HMPREF2844_04445;product=coproporphyrinogen III oxidase;protein_id=OFJ80888.1;transl_table=11 KV808207.1 Genbank gene 22601 23851 . - . ID=gene-HMPREF2844_04450;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=HMPREF2844_04450 KV808207.1 Protein Homology CDS 22601 23851 . - 0 ID=cds-OFJ80889.1;Parent=gene-HMPREF2844_04450;Dbxref=NCBI_GP:OFJ80889.1;Name=OFJ80889.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520001.1;locus_tag=HMPREF2844_04450;product=serine hydroxymethyltransferase;protein_id=OFJ80889.1;transl_table=11 KV808207.1 Genbank gene 23984 24361 . - . ID=gene-HMPREF2844_04455;Name=HMPREF2844_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04455 KV808207.1 Protein Homology CDS 23984 24361 . - 0 ID=cds-OFJ80890.1;Parent=gene-HMPREF2844_04455;Dbxref=NCBI_GP:OFJ80890.1;Name=OFJ80890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312885.1;locus_tag=HMPREF2844_04455;product=hypothetical protein;protein_id=OFJ80890.1;transl_table=11 KV808207.1 Genbank gene 24497 25654 . + . ID=gene-HMPREF2844_04460;Name=HMPREF2844_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04460 KV808207.1 Protein Homology CDS 24497 25654 . + 0 ID=cds-OFJ80891.1;Parent=gene-HMPREF2844_04460;Dbxref=NCBI_GP:OFJ80891.1;Name=OFJ80891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742705.1;locus_tag=HMPREF2844_04460;product=sugar transporter;protein_id=OFJ80891.1;transl_table=11 KV808207.1 Genbank gene 25870 27183 . - . ID=gene-HMPREF2844_04465;Name=HMPREF2844_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04465 KV808207.1 Protein Homology CDS 25870 27183 . - 0 ID=cds-OFJ80892.1;Parent=gene-HMPREF2844_04465;Dbxref=NCBI_GP:OFJ80892.1;Name=OFJ80892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006463523.1;locus_tag=HMPREF2844_04465;product=recombination factor protein RarA;protein_id=OFJ80892.1;transl_table=11 KV808207.1 Genbank pseudogene 27409 28937 . - . ID=gene-HMPREF2844_04470;Name=HMPREF2844_04470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04470;pseudo=true KV808207.1 Protein Homology CDS 27409 28937 . - 0 ID=cds-HMPREF2844_04470;Parent=gene-HMPREF2844_04470;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311814.1;locus_tag=HMPREF2844_04470;product=hypothetical protein;pseudo=true;transl_table=11 KV808207.1 Genbank gene 29088 29459 . + . ID=gene-HMPREF2844_04475;Name=HMPREF2844_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04475 KV808207.1 Protein Homology CDS 29088 29459 . + 0 ID=cds-OFJ80893.1;Parent=gene-HMPREF2844_04475;Dbxref=NCBI_GP:OFJ80893.1;Name=OFJ80893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710052.1;locus_tag=HMPREF2844_04475;product=hypothetical protein;protein_id=OFJ80893.1;transl_table=11 KV808207.1 Genbank gene 29603 31015 . + . ID=gene-HMPREF2844_04480;Name=HMPREF2844_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04480 KV808207.1 Protein Homology CDS 29603 31015 . + 0 ID=cds-OFJ80894.1;Parent=gene-HMPREF2844_04480;Dbxref=NCBI_GP:OFJ80894.1;Name=OFJ80894.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688280.1;locus_tag=HMPREF2844_04480;product=threonine synthase;protein_id=OFJ80894.1;transl_table=11 KV808207.1 Genbank gene 31224 32000 . + . ID=gene-HMPREF2844_04485;Name=HMPREF2844_04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04485 KV808207.1 Protein Homology CDS 31224 32000 . + 0 ID=cds-OFJ80895.1;Parent=gene-HMPREF2844_04485;Dbxref=NCBI_GP:OFJ80895.1;Name=OFJ80895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575386.1;locus_tag=HMPREF2844_04485;product=ferredoxin--NADP(+) reductase;protein_id=OFJ80895.1;transl_table=11 KV808207.1 Genbank gene 32346 32546 . + . ID=gene-HMPREF2844_04490;Name=HMPREF2844_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04490 KV808207.1 Protein Homology CDS 32346 32546 . + 0 ID=cds-OFJ80896.1;Parent=gene-HMPREF2844_04490;Dbxref=NCBI_GP:OFJ80896.1;Name=OFJ80896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765401.1;locus_tag=HMPREF2844_04490;product=hypothetical protein;protein_id=OFJ80896.1;transl_table=11 KV808207.1 Genbank gene 32592 33272 . + . ID=gene-HMPREF2844_04495;Name=HMPREF2844_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04495 KV808207.1 Protein Homology CDS 32592 33272 . + 0 ID=cds-OFJ80897.1;Parent=gene-HMPREF2844_04495;Dbxref=NCBI_GP:OFJ80897.1;Name=OFJ80897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742721.1;locus_tag=HMPREF2844_04495;product=NAD-dependent deacylase;protein_id=OFJ80897.1;transl_table=11 KV808207.1 Genbank gene 33681 35675 . - . ID=gene-HMPREF2844_04500;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=HMPREF2844_04500 KV808207.1 Protein Homology CDS 33681 35675 . - 0 ID=cds-OFJ80898.1;Parent=gene-HMPREF2844_04500;Dbxref=NCBI_GP:OFJ80898.1;Name=OFJ80898.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235944.1;locus_tag=HMPREF2844_04500;product=DNA mismatch repair protein MutL;protein_id=OFJ80898.1;transl_table=11 KV808207.1 Genbank gene 35773 37110 . - . ID=gene-HMPREF2844_04505;Name=HMPREF2844_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04505 KV808207.1 Protein Homology CDS 35773 37110 . - 0 ID=cds-OFJ80899.1;Parent=gene-HMPREF2844_04505;Dbxref=NCBI_GP:OFJ80899.1;Name=OFJ80899.1;Note=bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein%3B functions in riboflavin synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270937.1;locus_tag=HMPREF2844_04505;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=OFJ80899.1;transl_table=11 KV808207.1 Genbank gene 37436 38038 . + . ID=gene-HMPREF2844_04510;Name=HMPREF2844_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04510 KV808207.1 Protein Homology CDS 37436 38038 . + 0 ID=cds-OFJ80900.1;Parent=gene-HMPREF2844_04510;Dbxref=NCBI_GP:OFJ80900.1;Name=OFJ80900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687628.1;locus_tag=HMPREF2844_04510;product=hypothetical protein;protein_id=OFJ80900.1;transl_table=11 KV808207.1 Genbank gene 38221 39060 . + . ID=gene-HMPREF2844_04515;Name=HMPREF2844_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04515 KV808207.1 Protein Homology CDS 38221 39060 . + 0 ID=cds-OFJ80901.1;Parent=gene-HMPREF2844_04515;Dbxref=NCBI_GP:OFJ80901.1;Name=OFJ80901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270940.1;locus_tag=HMPREF2844_04515;product=zinc metalloprotease HtpX;protein_id=OFJ80901.1;transl_table=11 KV808207.1 Genbank gene 39189 39944 . + . ID=gene-HMPREF2844_04520;Name=HMPREF2844_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04520 KV808207.1 Protein Homology CDS 39189 39944 . + 0 ID=cds-OFJ80902.1;Parent=gene-HMPREF2844_04520;Dbxref=NCBI_GP:OFJ80902.1;Name=OFJ80902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270941.1;locus_tag=HMPREF2844_04520;product=5'/3'-nucleotidase SurE;protein_id=OFJ80902.1;transl_table=11 KV808207.1 Genbank gene 40117 41013 . + . ID=gene-HMPREF2844_04525;Name=HMPREF2844_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04525 KV808207.1 Protein Homology CDS 40117 41013 . + 0 ID=cds-OFJ80903.1;Parent=gene-HMPREF2844_04525;Dbxref=NCBI_GP:OFJ80903.1;Name=OFJ80903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312231.1;locus_tag=HMPREF2844_04525;product=peptidoglycan-binding protein LysM;protein_id=OFJ80903.1;transl_table=11 KV808207.1 Genbank gene 41244 41582 . + . ID=gene-HMPREF2844_04530;Name=HMPREF2844_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04530 KV808207.1 Protein Homology CDS 41244 41582 . + 0 ID=cds-OFJ80904.1;Parent=gene-HMPREF2844_04530;Dbxref=NCBI_GP:OFJ80904.1;Name=OFJ80904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746515.1;locus_tag=HMPREF2844_04530;product=hypothetical protein;protein_id=OFJ80904.1;transl_table=11 KV808207.1 Genbank gene 41733 42845 . + . ID=gene-HMPREF2844_04535;Name=HMPREF2844_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04535 KV808207.1 Protein Homology CDS 41733 42845 . + 0 ID=cds-OFJ80905.1;Parent=gene-HMPREF2844_04535;Dbxref=NCBI_GP:OFJ80905.1;Name=OFJ80905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173264.1;locus_tag=HMPREF2844_04535;product=hypothetical protein;protein_id=OFJ80905.1;transl_table=11 KV808207.1 Genbank gene 43304 44758 . + . ID=gene-HMPREF2844_04540;Name=HMPREF2844_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04540 KV808207.1 Protein Homology CDS 43304 44758 . + 0 ID=cds-OFJ80906.1;Parent=gene-HMPREF2844_04540;Dbxref=NCBI_GP:OFJ80906.1;Name=OFJ80906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270944.1;locus_tag=HMPREF2844_04540;product=hypothetical protein;protein_id=OFJ80906.1;transl_table=11 KV808207.1 Genbank gene 44811 46019 . - . ID=gene-HMPREF2844_04545;Name=HMPREF2844_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04545 KV808207.1 Protein Homology CDS 44811 46019 . - 0 ID=cds-OFJ80907.1;Parent=gene-HMPREF2844_04545;Dbxref=NCBI_GP:OFJ80907.1;Name=OFJ80907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742744.1;locus_tag=HMPREF2844_04545;product=uracil permease;protein_id=OFJ80907.1;transl_table=11 ##sequence-region KV808208.1 1 17547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808208.1 Genbank region 1 17547 . + . ID=KV808208.1:1..17547;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808208.1 Genbank gene 68 616 . - . ID=gene-HMPREF2844_04550;Name=HMPREF2844_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04550 KV808208.1 Protein Homology CDS 68 616 . - 0 ID=cds-OFJ80852.1;Parent=gene-HMPREF2844_04550;Dbxref=NCBI_GP:OFJ80852.1;Name=OFJ80852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686779.1;locus_tag=HMPREF2844_04550;product=shikimate kinase;protein_id=OFJ80852.1;transl_table=11 KV808208.1 Genbank gene 1042 3177 . - . ID=gene-HMPREF2844_04555;Name=HMPREF2844_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04555 KV808208.1 Protein Homology CDS 1042 3177 . - 0 ID=cds-OFJ80853.1;Parent=gene-HMPREF2844_04555;Dbxref=NCBI_GP:OFJ80853.1;Name=OFJ80853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682217.1;locus_tag=HMPREF2844_04555;product=pilus assembly protein PilQ;protein_id=OFJ80853.1;transl_table=11 KV808208.1 Genbank gene 3196 3750 . - . ID=gene-HMPREF2844_04560;Name=HMPREF2844_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04560 KV808208.1 Protein Homology CDS 3196 3750 . - 0 ID=cds-OFJ80854.1;Parent=gene-HMPREF2844_04560;Dbxref=NCBI_GP:OFJ80854.1;Name=OFJ80854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743750.1;locus_tag=HMPREF2844_04560;product=pilin assembly protein;protein_id=OFJ80854.1;transl_table=11 KV808208.1 Genbank gene 3768 4454 . - . ID=gene-HMPREF2844_04565;Name=HMPREF2844_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04565 KV808208.1 Protein Homology CDS 3768 4454 . - 0 ID=cds-OFJ80855.1;Parent=gene-HMPREF2844_04565;Dbxref=NCBI_GP:OFJ80855.1;Name=OFJ80855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682219.1;locus_tag=HMPREF2844_04565;product=pilus assembly protein PilO;protein_id=OFJ80855.1;transl_table=11 KV808208.1 Genbank gene 4455 5069 . - . ID=gene-HMPREF2844_04570;Name=HMPREF2844_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04570 KV808208.1 Protein Homology CDS 4455 5069 . - 0 ID=cds-OFJ80856.1;Parent=gene-HMPREF2844_04570;Dbxref=NCBI_GP:OFJ80856.1;Name=OFJ80856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686775.1;locus_tag=HMPREF2844_04570;product=pilus assembly protein PilP;protein_id=OFJ80856.1;transl_table=11 KV808208.1 Genbank gene 5071 6180 . - . ID=gene-HMPREF2844_04575;Name=HMPREF2844_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04575 KV808208.1 Protein Homology CDS 5071 6180 . - 0 ID=cds-OFJ80857.1;Parent=gene-HMPREF2844_04575;Dbxref=NCBI_GP:OFJ80857.1;Name=OFJ80857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765887.1;locus_tag=HMPREF2844_04575;product=pilus assembly protein PilM;protein_id=OFJ80857.1;transl_table=11 KV808208.1 Genbank gene 6328 8727 . + . ID=gene-HMPREF2844_04580;Name=HMPREF2844_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04580 KV808208.1 Protein Homology CDS 6328 8727 . + 0 ID=cds-OFJ80858.1;Parent=gene-HMPREF2844_04580;Dbxref=NCBI_GP:OFJ80858.1;Name=OFJ80858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237319.1;locus_tag=HMPREF2844_04580;product=peptidase;protein_id=OFJ80858.1;transl_table=11 KV808208.1 Genbank gene 9410 10858 . - . ID=gene-HMPREF2844_04585;Name=HMPREF2844_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04585 KV808208.1 Protein Homology CDS 9410 10858 . - 0 ID=cds-OFJ80859.1;Parent=gene-HMPREF2844_04585;Dbxref=NCBI_GP:OFJ80859.1;Name=OFJ80859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686773.1;locus_tag=HMPREF2844_04585;product=hypothetical protein;protein_id=OFJ80859.1;transl_table=11 KV808208.1 Genbank gene 10909 11403 . - . ID=gene-HMPREF2844_04590;Name=HMPREF2844_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04590 KV808208.1 Protein Homology CDS 10909 11403 . - 0 ID=cds-OFJ80860.1;Parent=gene-HMPREF2844_04590;Dbxref=NCBI_GP:OFJ80860.1;Name=OFJ80860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686772.1;locus_tag=HMPREF2844_04590;product=MarR family transcriptional regulator;protein_id=OFJ80860.1;transl_table=11 KV808208.1 cmsearch binding_site 11866 11910 . + . ID=id-KV808208.1:11866..11910;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV808208.1 Genbank gene 11915 12388 . + . ID=gene-HMPREF2844_04595;Name=HMPREF2844_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04595 KV808208.1 Protein Homology CDS 11915 12388 . + 0 ID=cds-OFJ80861.1;Parent=gene-HMPREF2844_04595;Dbxref=NCBI_GP:OFJ80861.1;Name=OFJ80861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002249967.1;locus_tag=HMPREF2844_04595;product=7-cyano-7-deazaguanine reductase;protein_id=OFJ80861.1;transl_table=11 KV808208.1 Genbank gene 12464 13147 . + . ID=gene-HMPREF2844_04600;Name=HMPREF2844_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04600 KV808208.1 Protein Homology CDS 12464 13147 . + 0 ID=cds-OFJ80862.1;Parent=gene-HMPREF2844_04600;Dbxref=NCBI_GP:OFJ80862.1;Name=OFJ80862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686770.1;locus_tag=HMPREF2844_04600;product=hypothetical protein;protein_id=OFJ80862.1;transl_table=11 KV808208.1 Genbank gene 13755 15050 . - . ID=gene-HMPREF2844_04605;Name=HMPREF2844_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04605 KV808208.1 Protein Homology CDS 13755 15050 . - 0 ID=cds-OFJ80863.1;Parent=gene-HMPREF2844_04605;Dbxref=NCBI_GP:OFJ80863.1;Name=OFJ80863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748435.1;locus_tag=HMPREF2844_04605;product=peptidase M23;protein_id=OFJ80863.1;transl_table=11 KV808208.1 Genbank gene 15394 16365 . + . ID=gene-HMPREF2844_04610;Name=HMPREF2844_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04610 KV808208.1 Protein Homology CDS 15394 16365 . + 0 ID=cds-OFJ80864.1;Parent=gene-HMPREF2844_04610;Dbxref=NCBI_GP:OFJ80864.1;Name=OFJ80864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004518798.1;locus_tag=HMPREF2844_04610;product=hypothetical protein;protein_id=OFJ80864.1;transl_table=11 KV808208.1 Genbank pseudogene 16558 17547 . - . ID=gene-HMPREF2844_04615;Name=HMPREF2844_04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_04615;pseudo=true KV808208.1 GeneMarkS+ CDS 16558 17547 . - 0 ID=cds-HMPREF2844_04615;Parent=gene-HMPREF2844_04615;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_04615;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808209.1 1 83405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808209.1 Genbank region 1 83405 . + . ID=KV808209.1:1..83405;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808209.1 Genbank gene 1 1066 . + . ID=gene-HMPREF2844_04620;Name=HMPREF2844_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04620;partial=true;start_range=.,1 KV808209.1 GeneMarkS+ CDS 1 1066 . + 1 ID=cds-OFJ80629.1;Parent=gene-HMPREF2844_04620;Dbxref=NCBI_GP:OFJ80629.1;Name=OFJ80629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_04620;partial=true;product=NTPase;protein_id=OFJ80629.1;start_range=.,1;transl_table=11 KV808209.1 Genbank gene 1124 1199 . - . ID=gene-HMPREF2844_04625;Name=HMPREF2844_04625;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04625 KV808209.1 tRNAscan-SE tRNA 1124 1199 . - . ID=rna-HMPREF2844_04625;Parent=gene-HMPREF2844_04625;anticodon=(pos:complement(1164..1166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04625;product=tRNA-Thr KV808209.1 tRNAscan-SE exon 1124 1199 . - . ID=exon-HMPREF2844_04625-1;Parent=rna-HMPREF2844_04625;anticodon=(pos:complement(1164..1166));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04625;product=tRNA-Thr KV808209.1 Genbank gene 1620 2930 . - . ID=gene-HMPREF2844_04630;Name=HMPREF2844_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04630 KV808209.1 Protein Homology CDS 1620 2930 . - 0 ID=cds-OFJ80630.1;Parent=gene-HMPREF2844_04630;Dbxref=NCBI_GP:OFJ80630.1;Name=OFJ80630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270045.1;locus_tag=HMPREF2844_04630;product=amino-acid N-acetyltransferase;protein_id=OFJ80630.1;transl_table=11 KV808209.1 Genbank gene 2927 3388 . - . ID=gene-HMPREF2844_04635;Name=HMPREF2844_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04635 KV808209.1 Protein Homology CDS 2927 3388 . - 0 ID=cds-OFJ80631.1;Parent=gene-HMPREF2844_04635;Dbxref=NCBI_GP:OFJ80631.1;Name=OFJ80631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776356.1;locus_tag=HMPREF2844_04635;product=hypothetical protein;protein_id=OFJ80631.1;transl_table=11 KV808209.1 Genbank gene 3501 4142 . - . ID=gene-HMPREF2844_04640;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF2844_04640 KV808209.1 Protein Homology CDS 3501 4142 . - 0 ID=cds-OFJ80632.1;Parent=gene-HMPREF2844_04640;Dbxref=NCBI_GP:OFJ80632.1;Name=OFJ80632.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759231.1;locus_tag=HMPREF2844_04640;product=orotate phosphoribosyltransferase;protein_id=OFJ80632.1;transl_table=11 KV808209.1 Genbank gene 4395 5081 . + . ID=gene-HMPREF2844_04645;Name=HMPREF2844_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04645 KV808209.1 Protein Homology CDS 4395 5081 . + 0 ID=cds-OFJ80633.1;Parent=gene-HMPREF2844_04645;Dbxref=NCBI_GP:OFJ80633.1;Name=OFJ80633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014574277.1;locus_tag=HMPREF2844_04645;product=hypothetical protein;protein_id=OFJ80633.1;transl_table=11 KV808209.1 Genbank gene 5210 5716 . + . ID=gene-HMPREF2844_04650;Name=HMPREF2844_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04650 KV808209.1 Protein Homology CDS 5210 5716 . + 0 ID=cds-OFJ80634.1;Parent=gene-HMPREF2844_04650;Dbxref=NCBI_GP:OFJ80634.1;Name=OFJ80634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682645.1;locus_tag=HMPREF2844_04650;product=pantetheine-phosphate adenylyltransferase;protein_id=OFJ80634.1;transl_table=11 KV808209.1 Genbank gene 5980 8088 . + . ID=gene-HMPREF2844_04655;Name=HMPREF2844_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04655 KV808209.1 Protein Homology CDS 5980 8088 . + 0 ID=cds-OFJ80635.1;Parent=gene-HMPREF2844_04655;Dbxref=NCBI_GP:OFJ80635.1;Name=OFJ80635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312440.1;locus_tag=HMPREF2844_04655;product=TonB-dependent receptor;protein_id=OFJ80635.1;transl_table=11 KV808209.1 Genbank gene 8391 8753 . + . ID=gene-HMPREF2844_04660;Name=HMPREF2844_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04660 KV808209.1 Protein Homology CDS 8391 8753 . + 0 ID=cds-OFJ80567.1;Parent=gene-HMPREF2844_04660;Dbxref=NCBI_GP:OFJ80567.1;Name=OFJ80567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681812.1;locus_tag=HMPREF2844_04660;product=VacJ;protein_id=OFJ80567.1;transl_table=11 KV808209.1 Genbank gene 8753 9139 . + . ID=gene-HMPREF2844_04665;Name=HMPREF2844_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04665 KV808209.1 Protein Homology CDS 8753 9139 . + 0 ID=cds-OFJ80568.1;Parent=gene-HMPREF2844_04665;Dbxref=NCBI_GP:OFJ80568.1;Name=OFJ80568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270037.1;locus_tag=HMPREF2844_04665;product=thioesterase;protein_id=OFJ80568.1;transl_table=11 KV808209.1 Genbank gene 9136 9624 . + . ID=gene-HMPREF2844_04670;Name=HMPREF2844_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04670 KV808209.1 Protein Homology CDS 9136 9624 . + 0 ID=cds-OFJ80569.1;Parent=gene-HMPREF2844_04670;Dbxref=NCBI_GP:OFJ80569.1;Name=OFJ80569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676062.1;locus_tag=HMPREF2844_04670;product=thioredoxin;protein_id=OFJ80569.1;transl_table=11 KV808209.1 Genbank gene 10049 11701 . - . ID=gene-HMPREF2844_04675;Name=HMPREF2844_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04675 KV808209.1 Protein Homology CDS 10049 11701 . - 0 ID=cds-OFJ80570.1;Parent=gene-HMPREF2844_04675;Dbxref=NCBI_GP:OFJ80570.1;Name=OFJ80570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741451.1;locus_tag=HMPREF2844_04675;product=hypothetical protein;protein_id=OFJ80570.1;transl_table=11 KV808209.1 Genbank gene 11871 12086 . - . ID=gene-HMPREF2844_04680;Name=HMPREF2844_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04680 KV808209.1 Protein Homology CDS 11871 12086 . - 0 ID=cds-OFJ80571.1;Parent=gene-HMPREF2844_04680;Dbxref=NCBI_GP:OFJ80571.1;Name=OFJ80571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681847.1;locus_tag=HMPREF2844_04680;product=50S ribosomal protein L31;protein_id=OFJ80571.1;transl_table=11 KV808209.1 Genbank gene 12369 12884 . + . ID=gene-HMPREF2844_04685;Name=HMPREF2844_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04685 KV808209.1 Protein Homology CDS 12369 12884 . + 0 ID=cds-OFJ80572.1;Parent=gene-HMPREF2844_04685;Dbxref=NCBI_GP:OFJ80572.1;Name=OFJ80572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519047.1;locus_tag=HMPREF2844_04685;product=acetyltransferase;protein_id=OFJ80572.1;transl_table=11 KV808209.1 Genbank gene 12970 14391 . - . ID=gene-HMPREF2844_04690;Name=HMPREF2844_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04690 KV808209.1 Protein Homology CDS 12970 14391 . - 0 ID=cds-OFJ80573.1;Parent=gene-HMPREF2844_04690;Dbxref=NCBI_GP:OFJ80573.1;Name=OFJ80573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXE6.1;locus_tag=HMPREF2844_04690;product=cysteine--tRNA ligase;protein_id=OFJ80573.1;transl_table=11 KV808209.1 Genbank gene 14388 14903 . - . ID=gene-HMPREF2844_04695;Name=HMPREF2844_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04695 KV808209.1 Protein Homology CDS 14388 14903 . - 0 ID=cds-OFJ80574.1;Parent=gene-HMPREF2844_04695;Dbxref=NCBI_GP:OFJ80574.1;Name=OFJ80574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712978.1;locus_tag=HMPREF2844_04695;product=cysteinyl-tRNA synthetase;protein_id=OFJ80574.1;transl_table=11 KV808209.1 Genbank gene 14914 15960 . - . ID=gene-HMPREF2844_04700;Name=HMPREF2844_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04700 KV808209.1 Protein Homology CDS 14914 15960 . - 0 ID=cds-OFJ80575.1;Parent=gene-HMPREF2844_04700;Dbxref=NCBI_GP:OFJ80575.1;Name=OFJ80575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269890.1;locus_tag=HMPREF2844_04700;product=ATP-binding protein;protein_id=OFJ80575.1;transl_table=11 KV808209.1 Genbank gene 16044 17198 . - . ID=gene-HMPREF2844_04705;Name=HMPREF2844_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04705 KV808209.1 Protein Homology CDS 16044 17198 . - 0 ID=cds-OFJ80576.1;Parent=gene-HMPREF2844_04705;Dbxref=NCBI_GP:OFJ80576.1;Name=OFJ80576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5D9.1;locus_tag=HMPREF2844_04705;product=GTPase ObgE;protein_id=OFJ80576.1;transl_table=11 KV808209.1 Genbank gene 17394 18092 . - . ID=gene-HMPREF2844_04710;Name=HMPREF2844_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04710 KV808209.1 Protein Homology CDS 17394 18092 . - 0 ID=cds-OFJ80577.1;Parent=gene-HMPREF2844_04710;Dbxref=NCBI_GP:OFJ80577.1;Name=OFJ80577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760389.1;locus_tag=HMPREF2844_04710;product=disulfide bond formation protein DsbA;protein_id=OFJ80577.1;transl_table=11 KV808209.1 Genbank gene 18128 18358 . - . ID=gene-HMPREF2844_04715;Name=HMPREF2844_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04715 KV808209.1 Protein Homology CDS 18128 18358 . - 0 ID=cds-OFJ80578.1;Parent=gene-HMPREF2844_04715;Dbxref=NCBI_GP:OFJ80578.1;Name=OFJ80578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686433.1;locus_tag=HMPREF2844_04715;product=magnesium transporter CorA;protein_id=OFJ80578.1;transl_table=11 KV808209.1 Genbank gene 18303 19844 . + . ID=gene-HMPREF2844_04720;Name=HMPREF2844_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04720 KV808209.1 Protein Homology CDS 18303 19844 . + 0 ID=cds-OFJ80579.1;Parent=gene-HMPREF2844_04720;Dbxref=NCBI_GP:OFJ80579.1;Name=OFJ80579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741438.1;locus_tag=HMPREF2844_04720;product=lipid II flippase MurJ;protein_id=OFJ80579.1;transl_table=11 KV808209.1 Genbank gene 20219 21010 . + . ID=gene-HMPREF2844_04725;Name=HMPREF2844_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04725 KV808209.1 Protein Homology CDS 20219 21010 . + 0 ID=cds-OFJ80586.1;Parent=gene-HMPREF2844_04725;Dbxref=NCBI_GP:OFJ80586.1;Name=OFJ80586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269894.1;locus_tag=HMPREF2844_04725;product=hypothetical protein;protein_id=OFJ80586.1;transl_table=11 KV808209.1 Genbank gene 21079 21879 . - . ID=gene-HMPREF2844_04730;Name=HMPREF2844_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04730 KV808209.1 Protein Homology CDS 21079 21879 . - 0 ID=cds-OFJ80580.1;Parent=gene-HMPREF2844_04730;Dbxref=NCBI_GP:OFJ80580.1;Name=OFJ80580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749379.1;locus_tag=HMPREF2844_04730;product=damage-inducible protein CinA;protein_id=OFJ80580.1;transl_table=11 KV808209.1 Genbank gene 22193 23536 . + . ID=gene-HMPREF2844_04735;Name=HMPREF2844_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04735 KV808209.1 Protein Homology CDS 22193 23536 . + 0 ID=cds-OFJ80581.1;Parent=gene-HMPREF2844_04735;Dbxref=NCBI_GP:OFJ80581.1;Name=OFJ80581.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWJ8.1;locus_tag=HMPREF2844_04735;product=argininosuccinate synthase;protein_id=OFJ80581.1;transl_table=11 KV808209.1 Genbank gene 23632 24078 . + . ID=gene-HMPREF2844_04740;Name=HMPREF2844_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04740 KV808209.1 Protein Homology CDS 23632 24078 . + 0 ID=cds-OFJ80582.1;Parent=gene-HMPREF2844_04740;Dbxref=NCBI_GP:OFJ80582.1;Name=OFJ80582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749372.1;locus_tag=HMPREF2844_04740;product=hypothetical protein;protein_id=OFJ80582.1;transl_table=11 KV808209.1 Genbank gene 24091 24720 . + . ID=gene-HMPREF2844_04745;Name=HMPREF2844_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04745 KV808209.1 Protein Homology CDS 24091 24720 . + 0 ID=cds-OFJ80583.1;Parent=gene-HMPREF2844_04745;Dbxref=NCBI_GP:OFJ80583.1;Name=OFJ80583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310860.1;locus_tag=HMPREF2844_04745;product=hypothetical protein;protein_id=OFJ80583.1;transl_table=11 KV808209.1 Genbank gene 24857 26311 . - . ID=gene-HMPREF2844_04750;Name=HMPREF2844_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04750 KV808209.1 Protein Homology CDS 24857 26311 . - 0 ID=cds-OFJ80584.1;Parent=gene-HMPREF2844_04750;Dbxref=NCBI_GP:OFJ80584.1;Name=OFJ80584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312642.1;locus_tag=HMPREF2844_04750;product=hypothetical protein;protein_id=OFJ80584.1;transl_table=11 KV808209.1 Genbank gene 26424 27164 . - . ID=gene-HMPREF2844_04755;Name=HMPREF2844_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04755 KV808209.1 Protein Homology CDS 26424 27164 . - 0 ID=cds-OFJ80585.1;Parent=gene-HMPREF2844_04755;Dbxref=NCBI_GP:OFJ80585.1;Name=OFJ80585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687226.1;locus_tag=HMPREF2844_04755;product=hypothetical protein;protein_id=OFJ80585.1;transl_table=11 KV808209.1 Genbank gene 27770 27845 . - . ID=gene-HMPREF2844_04760;Name=HMPREF2844_04760;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04760 KV808209.1 tRNAscan-SE tRNA 27770 27845 . - . ID=rna-HMPREF2844_04760;Parent=gene-HMPREF2844_04760;anticodon=(pos:complement(27810..27812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04760;product=tRNA-Phe KV808209.1 tRNAscan-SE exon 27770 27845 . - . ID=exon-HMPREF2844_04760-1;Parent=rna-HMPREF2844_04760;anticodon=(pos:complement(27810..27812));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04760;product=tRNA-Phe KV808209.1 Genbank gene 28066 28338 . + . ID=gene-HMPREF2844_04765;Name=HMPREF2844_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04765 KV808209.1 Protein Homology CDS 28066 28338 . + 0 ID=cds-OFJ80530.1;Parent=gene-HMPREF2844_04765;Dbxref=NCBI_GP:OFJ80530.1;Name=OFJ80530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009117857.1;locus_tag=HMPREF2844_04765;product=Fe(2+)-trafficking protein;protein_id=OFJ80530.1;transl_table=11 KV808209.1 Genbank gene 28420 29025 . - . ID=gene-HMPREF2844_04770;Name=HMPREF2844_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04770 KV808209.1 Protein Homology CDS 28420 29025 . - 0 ID=cds-OFJ80531.1;Parent=gene-HMPREF2844_04770;Dbxref=NCBI_GP:OFJ80531.1;Name=OFJ80531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687225.1;locus_tag=HMPREF2844_04770;product=nitroreductase;protein_id=OFJ80531.1;transl_table=11 KV808209.1 Genbank gene 29109 29510 . - . ID=gene-HMPREF2844_04775;Name=HMPREF2844_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04775 KV808209.1 Protein Homology CDS 29109 29510 . - 0 ID=cds-OFJ80532.1;Parent=gene-HMPREF2844_04775;Dbxref=NCBI_GP:OFJ80532.1;Name=OFJ80532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714759.1;locus_tag=HMPREF2844_04775;product=LuxR family transcriptional regulator;protein_id=OFJ80532.1;transl_table=11 KV808209.1 Genbank gene 29633 30529 . + . ID=gene-HMPREF2844_04780;Name=HMPREF2844_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04780 KV808209.1 Protein Homology CDS 29633 30529 . + 0 ID=cds-OFJ80533.1;Parent=gene-HMPREF2844_04780;Dbxref=NCBI_GP:OFJ80533.1;Name=OFJ80533.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743316.1;locus_tag=HMPREF2844_04780;product=LysR family transcriptional regulator;protein_id=OFJ80533.1;transl_table=11 KV808209.1 Genbank gene 30609 31040 . - . ID=gene-HMPREF2844_04785;Name=HMPREF2844_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04785 KV808209.1 Protein Homology CDS 30609 31040 . - 0 ID=cds-OFJ80534.1;Parent=gene-HMPREF2844_04785;Dbxref=NCBI_GP:OFJ80534.1;Name=OFJ80534.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766441.1;locus_tag=HMPREF2844_04785;product=pseudoazurin;protein_id=OFJ80534.1;transl_table=11 KV808209.1 Genbank gene 31428 32195 . - . ID=gene-HMPREF2844_04790;Name=HMPREF2844_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04790 KV808209.1 Protein Homology CDS 31428 32195 . - 0 ID=cds-OFJ80494.1;Parent=gene-HMPREF2844_04790;Dbxref=NCBI_GP:OFJ80494.1;Name=OFJ80494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681737.1;locus_tag=HMPREF2844_04790;product=peptide ABC transporter substrate-binding protein;protein_id=OFJ80494.1;transl_table=11 KV808209.1 Genbank gene 32206 33252 . - . ID=gene-HMPREF2844_04795;Name=HMPREF2844_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04795 KV808209.1 Protein Homology CDS 32206 33252 . - 0 ID=cds-OFJ80495.1;Parent=gene-HMPREF2844_04795;Dbxref=NCBI_GP:OFJ80495.1;Name=OFJ80495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312537.1;locus_tag=HMPREF2844_04795;product=iron ABC transporter permease;protein_id=OFJ80495.1;transl_table=11 KV808209.1 Genbank gene 33708 34823 . - . ID=gene-HMPREF2844_04800;Name=HMPREF2844_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04800 KV808209.1 Protein Homology CDS 33708 34823 . - 0 ID=cds-OFJ80496.1;Parent=gene-HMPREF2844_04800;Dbxref=NCBI_GP:OFJ80496.1;Name=OFJ80496.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687219.1;locus_tag=HMPREF2844_04800;product=iron ABC transporter substrate-binding protein;protein_id=OFJ80496.1;transl_table=11 KV808209.1 Genbank gene 35085 35915 . + . ID=gene-HMPREF2844_04805;Name=HMPREF2844_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04805 KV808209.1 Protein Homology CDS 35085 35915 . + 0 ID=cds-OFJ80497.1;Parent=gene-HMPREF2844_04805;Dbxref=NCBI_GP:OFJ80497.1;Name=OFJ80497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755736.1;locus_tag=HMPREF2844_04805;product=glutathione synthetase;protein_id=OFJ80497.1;transl_table=11 KV808209.1 Genbank gene 36015 36665 . - . ID=gene-HMPREF2844_04810;Name=HMPREF2844_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04810 KV808209.1 Protein Homology CDS 36015 36665 . - 0 ID=cds-OFJ80498.1;Parent=gene-HMPREF2844_04810;Dbxref=NCBI_GP:OFJ80498.1;Name=OFJ80498.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283936.1;locus_tag=HMPREF2844_04810;product=HAD family hydrolase;protein_id=OFJ80498.1;transl_table=11 KV808209.1 Genbank gene 36821 37825 . + . ID=gene-HMPREF2844_04815;Name=HMPREF2844_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04815 KV808209.1 Protein Homology CDS 36821 37825 . + 0 ID=cds-OFJ80499.1;Parent=gene-HMPREF2844_04815;Dbxref=NCBI_GP:OFJ80499.1;Name=OFJ80499.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775994.1;locus_tag=HMPREF2844_04815;product=dihydroorotate dehydrogenase;protein_id=OFJ80499.1;transl_table=11 KV808209.1 Genbank gene 37901 38431 . + . ID=gene-HMPREF2844_04820;Name=HMPREF2844_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04820 KV808209.1 Protein Homology CDS 37901 38431 . + 0 ID=cds-OFJ80500.1;Parent=gene-HMPREF2844_04820;Dbxref=NCBI_GP:OFJ80500.1;Name=OFJ80500.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271189.1;locus_tag=HMPREF2844_04820;product=hypothetical protein;protein_id=OFJ80500.1;transl_table=11 KV808209.1 Genbank gene 39028 39103 . - . ID=gene-HMPREF2844_04825;Name=HMPREF2844_04825;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04825 KV808209.1 tRNAscan-SE tRNA 39028 39103 . - . ID=rna-HMPREF2844_04825;Parent=gene-HMPREF2844_04825;anticodon=(pos:complement(39068..39070));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04825;product=tRNA-Ala KV808209.1 tRNAscan-SE exon 39028 39103 . - . ID=exon-HMPREF2844_04825-1;Parent=rna-HMPREF2844_04825;anticodon=(pos:complement(39068..39070));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04825;product=tRNA-Ala KV808209.1 Genbank gene 39110 39186 . - . ID=gene-HMPREF2844_04830;Name=HMPREF2844_04830;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_04830 KV808209.1 tRNAscan-SE tRNA 39110 39186 . - . ID=rna-HMPREF2844_04830;Parent=gene-HMPREF2844_04830;anticodon=(pos:complement(39150..39152));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04830;product=tRNA-Met KV808209.1 tRNAscan-SE exon 39110 39186 . - . ID=exon-HMPREF2844_04830-1;Parent=rna-HMPREF2844_04830;anticodon=(pos:complement(39150..39152));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_04830;product=tRNA-Met KV808209.1 Genbank gene 39354 40511 . - . ID=gene-HMPREF2844_04835;Name=HMPREF2844_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04835 KV808209.1 Protein Homology CDS 39354 40511 . - 0 ID=cds-OFJ80438.1;Parent=gene-HMPREF2844_04835;Dbxref=NCBI_GP:OFJ80438.1;Name=OFJ80438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681873.1;locus_tag=HMPREF2844_04835;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=OFJ80438.1;transl_table=11 KV808209.1 Genbank gene 40863 41318 . + . ID=gene-HMPREF2844_04840;Name=HMPREF2844_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04840 KV808209.1 Protein Homology CDS 40863 41318 . + 0 ID=cds-OFJ80439.1;Parent=gene-HMPREF2844_04840;Dbxref=NCBI_GP:OFJ80439.1;Name=OFJ80439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676745.1;locus_tag=HMPREF2844_04840;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=OFJ80439.1;transl_table=11 KV808209.1 Genbank gene 41315 42268 . + . ID=gene-HMPREF2844_04845;Name=HMPREF2844_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04845 KV808209.1 Protein Homology CDS 41315 42268 . + 0 ID=cds-OFJ80440.1;Parent=gene-HMPREF2844_04845;Dbxref=NCBI_GP:OFJ80440.1;Name=OFJ80440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687213.1;locus_tag=HMPREF2844_04845;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=OFJ80440.1;transl_table=11 KV808209.1 Genbank gene 42324 42587 . + . ID=gene-HMPREF2844_04850;Name=HMPREF2844_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04850 KV808209.1 Protein Homology CDS 42324 42587 . + 0 ID=cds-OFJ80441.1;Parent=gene-HMPREF2844_04850;Dbxref=NCBI_GP:OFJ80441.1;Name=OFJ80441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681879.1;locus_tag=HMPREF2844_04850;product=cell division protein FtsL;protein_id=OFJ80441.1;transl_table=11 KV808209.1 Genbank gene 42678 44426 . + . ID=gene-HMPREF2844_04855;Name=HMPREF2844_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04855 KV808209.1 Protein Homology CDS 42678 44426 . + 0 ID=cds-OFJ80442.1;Parent=gene-HMPREF2844_04855;Dbxref=NCBI_GP:OFJ80442.1;Name=OFJ80442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247964.1;locus_tag=HMPREF2844_04855;product=penicillin-binding protein;protein_id=OFJ80442.1;transl_table=11 KV808209.1 Genbank gene 44451 45929 . + . ID=gene-HMPREF2844_04860;Name=HMPREF2844_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04860 KV808209.1 Protein Homology CDS 44451 45929 . + 0 ID=cds-OFJ80443.1;Parent=gene-HMPREF2844_04860;Dbxref=NCBI_GP:OFJ80443.1;Name=OFJ80443.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709945.1;locus_tag=HMPREF2844_04860;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=OFJ80443.1;transl_table=11 KV808209.1 Genbank gene 46116 46637 . + . ID=gene-HMPREF2844_04865;Name=HMPREF2844_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04865 KV808209.1 Protein Homology CDS 46116 46637 . + 0 ID=cds-OFJ80444.1;Parent=gene-HMPREF2844_04865;Dbxref=NCBI_GP:OFJ80444.1;Name=OFJ80444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271183.1;locus_tag=HMPREF2844_04865;product=peptidase M23;protein_id=OFJ80444.1;transl_table=11 KV808209.1 Genbank gene 46662 47522 . + . ID=gene-HMPREF2844_04870;Name=HMPREF2844_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04870 KV808209.1 Protein Homology CDS 46662 47522 . + 0 ID=cds-OFJ80445.1;Parent=gene-HMPREF2844_04870;Dbxref=NCBI_GP:OFJ80445.1;Name=OFJ80445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310919.1;locus_tag=HMPREF2844_04870;product=peptidase;protein_id=OFJ80445.1;transl_table=11 KV808209.1 Genbank gene 47563 48294 . + . ID=gene-HMPREF2844_04875;Name=HMPREF2844_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04875 KV808209.1 GeneMarkS+ CDS 47563 48294 . + 0 ID=cds-OFJ80446.1;Parent=gene-HMPREF2844_04875;Dbxref=NCBI_GP:OFJ80446.1;Name=OFJ80446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_04875;product=hypothetical protein;protein_id=OFJ80446.1;transl_table=11 KV808209.1 Genbank gene 48345 49712 . + . ID=gene-HMPREF2844_04880;Name=HMPREF2844_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04880 KV808209.1 Protein Homology CDS 48345 49712 . + 0 ID=cds-OFJ80447.1;Parent=gene-HMPREF2844_04880;Dbxref=NCBI_GP:OFJ80447.1;Name=OFJ80447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681884.1;locus_tag=HMPREF2844_04880;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=OFJ80447.1;transl_table=11 KV808209.1 Genbank gene 49715 50143 . + . ID=gene-HMPREF2844_04885;Name=HMPREF2844_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04885 KV808209.1 GeneMarkS+ CDS 49715 50143 . + 0 ID=cds-OFJ80448.1;Parent=gene-HMPREF2844_04885;Dbxref=NCBI_GP:OFJ80448.1;Name=OFJ80448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_04885;product=hypothetical protein;protein_id=OFJ80448.1;transl_table=11 KV808209.1 Genbank gene 50529 51611 . + . ID=gene-HMPREF2844_04890;Name=HMPREF2844_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04890 KV808209.1 Protein Homology CDS 50529 51611 . + 0 ID=cds-OFJ80449.1;Parent=gene-HMPREF2844_04890;Dbxref=NCBI_GP:OFJ80449.1;Name=OFJ80449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310927.1;locus_tag=HMPREF2844_04890;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=OFJ80449.1;transl_table=11 KV808209.1 Genbank gene 51777 52436 . - . ID=gene-HMPREF2844_04895;Name=HMPREF2844_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04895 KV808209.1 Protein Homology CDS 51777 52436 . - 0 ID=cds-OFJ80450.1;Parent=gene-HMPREF2844_04895;Dbxref=NCBI_GP:OFJ80450.1;Name=OFJ80450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004005815.1;locus_tag=HMPREF2844_04895;product=NAD(P)H-dependent oxidoreductase;protein_id=OFJ80450.1;transl_table=11 KV808209.1 Genbank gene 52433 53560 . - . ID=gene-HMPREF2844_04900;Name=HMPREF2844_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04900 KV808209.1 Protein Homology CDS 52433 53560 . - 0 ID=cds-OFJ80451.1;Parent=gene-HMPREF2844_04900;Dbxref=NCBI_GP:OFJ80451.1;Name=OFJ80451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687203.1;locus_tag=HMPREF2844_04900;product=oxidoreductase;protein_id=OFJ80451.1;transl_table=11 KV808209.1 Genbank gene 54228 55112 . - . ID=gene-HMPREF2844_04905;Name=HMPREF2844_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04905 KV808209.1 Protein Homology CDS 54228 55112 . - 0 ID=cds-OFJ80331.1;Parent=gene-HMPREF2844_04905;Dbxref=NCBI_GP:OFJ80331.1;Name=OFJ80331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764075.1;locus_tag=HMPREF2844_04905;product=hypothetical protein;protein_id=OFJ80331.1;transl_table=11 KV808209.1 Genbank gene 55127 55642 . + . ID=gene-HMPREF2844_04910;Name=HMPREF2844_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04910 KV808209.1 Protein Homology CDS 55127 55642 . + 0 ID=cds-OFJ80332.1;Parent=gene-HMPREF2844_04910;Dbxref=NCBI_GP:OFJ80332.1;Name=OFJ80332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748145.1;locus_tag=HMPREF2844_04910;product=hypothetical protein;protein_id=OFJ80332.1;transl_table=11 KV808209.1 Genbank gene 55655 56350 . + . ID=gene-HMPREF2844_04915;Name=HMPREF2844_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04915 KV808209.1 Protein Homology CDS 55655 56350 . + 0 ID=cds-OFJ80333.1;Parent=gene-HMPREF2844_04915;Dbxref=NCBI_GP:OFJ80333.1;Name=OFJ80333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271174.1;locus_tag=HMPREF2844_04915;product=hypothetical protein;protein_id=OFJ80333.1;transl_table=11 KV808209.1 Genbank gene 56599 58791 . - . ID=gene-HMPREF2844_04920;Name=HMPREF2844_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04920 KV808209.1 Protein Homology CDS 56599 58791 . - 0 ID=cds-OFJ80334.1;Parent=gene-HMPREF2844_04920;Dbxref=NCBI_GP:OFJ80334.1;Name=OFJ80334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687200.1;locus_tag=HMPREF2844_04920;product=tyrosine protein kinase;protein_id=OFJ80334.1;transl_table=11 KV808209.1 Genbank gene 58838 59284 . - . ID=gene-HMPREF2844_04925;Name=HMPREF2844_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04925 KV808209.1 Protein Homology CDS 58838 59284 . - 0 ID=cds-OFJ80335.1;Parent=gene-HMPREF2844_04925;Dbxref=NCBI_GP:OFJ80335.1;Name=OFJ80335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743280.1;locus_tag=HMPREF2844_04925;product=phosphotyrosine protein phosphatase;protein_id=OFJ80335.1;transl_table=11 KV808209.1 Genbank gene 59454 60587 . - . ID=gene-HMPREF2844_04930;Name=HMPREF2844_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04930 KV808209.1 Protein Homology CDS 59454 60587 . - 0 ID=cds-OFJ80336.1;Parent=gene-HMPREF2844_04930;Dbxref=NCBI_GP:OFJ80336.1;Name=OFJ80336.1;Note=required for the translocation of capsular polysaccharide through the outer membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759457.1;locus_tag=HMPREF2844_04930;product=polysaccharide export protein Wza;protein_id=OFJ80336.1;transl_table=11 KV808209.1 Genbank gene 60676 62568 . - . ID=gene-HMPREF2844_04935;Name=HMPREF2844_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04935 KV808209.1 Protein Homology CDS 60676 62568 . - 0 ID=cds-OFJ80337.1;Parent=gene-HMPREF2844_04935;Dbxref=NCBI_GP:OFJ80337.1;Name=OFJ80337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684572.1;locus_tag=HMPREF2844_04935;product=nucleoside-diphosphate sugar epimerase;protein_id=OFJ80337.1;transl_table=11 KV808209.1 Genbank gene 62762 63937 . - . ID=gene-HMPREF2844_04940;Name=HMPREF2844_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04940 KV808209.1 Protein Homology CDS 62762 63937 . - 0 ID=cds-OFJ80338.1;Parent=gene-HMPREF2844_04940;Dbxref=NCBI_GP:OFJ80338.1;Name=OFJ80338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687196.1;locus_tag=HMPREF2844_04940;product=aminotransferase;protein_id=OFJ80338.1;transl_table=11 KV808209.1 Genbank gene 63930 64712 . - . ID=gene-HMPREF2844_04945;Name=HMPREF2844_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04945 KV808209.1 Protein Homology CDS 63930 64712 . - 0 ID=cds-OFJ80339.1;Parent=gene-HMPREF2844_04945;Dbxref=NCBI_GP:OFJ80339.1;Name=OFJ80339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271167.1;locus_tag=HMPREF2844_04945;product=formyl transferase;protein_id=OFJ80339.1;transl_table=11 KV808209.1 Genbank gene 64760 65446 . - . ID=gene-HMPREF2844_04950;Name=HMPREF2844_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04950 KV808209.1 Protein Homology CDS 64760 65446 . - 0 ID=cds-OFJ80340.1;Parent=gene-HMPREF2844_04950;Dbxref=NCBI_GP:OFJ80340.1;Name=OFJ80340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271166.1;locus_tag=HMPREF2844_04950;product=haloacid dehalogenase;protein_id=OFJ80340.1;transl_table=11 KV808209.1 Genbank gene 65433 66407 . - . ID=gene-HMPREF2844_04955;Name=HMPREF2844_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04955 KV808209.1 Protein Homology CDS 65433 66407 . - 0 ID=cds-OFJ80341.1;Parent=gene-HMPREF2844_04955;Dbxref=NCBI_GP:OFJ80341.1;Name=OFJ80341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520871.1;locus_tag=HMPREF2844_04955;product=carbamoyl phosphate synthase large subunit;protein_id=OFJ80341.1;transl_table=11 KV808209.1 Genbank gene 66394 67011 . - . ID=gene-HMPREF2844_04960;Name=HMPREF2844_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04960 KV808209.1 Protein Homology CDS 66394 67011 . - 0 ID=cds-OFJ80342.1;Parent=gene-HMPREF2844_04960;Dbxref=NCBI_GP:OFJ80342.1;Name=OFJ80342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759473.1;locus_tag=HMPREF2844_04960;product=sugar transferase;protein_id=OFJ80342.1;transl_table=11 KV808209.1 Genbank gene 67004 68176 . - . ID=gene-HMPREF2844_04965;Name=HMPREF2844_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04965 KV808209.1 Protein Homology CDS 67004 68176 . - 0 ID=cds-OFJ80343.1;Parent=gene-HMPREF2844_04965;Dbxref=NCBI_GP:OFJ80343.1;Name=OFJ80343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221486.1;locus_tag=HMPREF2844_04965;product=hypothetical protein;protein_id=OFJ80343.1;transl_table=11 KV808209.1 Genbank gene 68190 69263 . - . ID=gene-HMPREF2844_04970;Name=HMPREF2844_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04970 KV808209.1 Protein Homology CDS 68190 69263 . - 0 ID=cds-OFJ80344.1;Parent=gene-HMPREF2844_04970;Dbxref=NCBI_GP:OFJ80344.1;Name=OFJ80344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744773.1;locus_tag=HMPREF2844_04970;product=hypothetical protein;protein_id=OFJ80344.1;transl_table=11 KV808209.1 Genbank gene 69277 70554 . - . ID=gene-HMPREF2844_04975;Name=HMPREF2844_04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04975 KV808209.1 Protein Homology CDS 69277 70554 . - 0 ID=cds-OFJ80345.1;Parent=gene-HMPREF2844_04975;Dbxref=NCBI_GP:OFJ80345.1;Name=OFJ80345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520867.1;locus_tag=HMPREF2844_04975;product=hypothetical protein;protein_id=OFJ80345.1;transl_table=11 KV808209.1 Genbank gene 70729 72147 . - . ID=gene-HMPREF2844_04980;Name=HMPREF2844_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04980 KV808209.1 Protein Homology CDS 70729 72147 . - 0 ID=cds-OFJ80346.1;Parent=gene-HMPREF2844_04980;Dbxref=NCBI_GP:OFJ80346.1;Name=OFJ80346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682250.1;locus_tag=HMPREF2844_04980;product=hypothetical protein;protein_id=OFJ80346.1;transl_table=11 KV808209.1 Genbank gene 72313 73620 . - . ID=gene-HMPREF2844_04985;Name=HMPREF2844_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04985 KV808209.1 Protein Homology CDS 72313 73620 . - 0 ID=cds-OFJ80347.1;Parent=gene-HMPREF2844_04985;Dbxref=NCBI_GP:OFJ80347.1;Name=OFJ80347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520865.1;locus_tag=HMPREF2844_04985;product=UDP-N-acetyl-D-glucosamine dehydrogenase;protein_id=OFJ80347.1;transl_table=11 KV808209.1 Genbank gene 74045 74701 . - . ID=gene-HMPREF2844_04990;Name=HMPREF2844_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04990 KV808209.1 Protein Homology CDS 74045 74701 . - 0 ID=cds-OFJ80348.1;Parent=gene-HMPREF2844_04990;Dbxref=NCBI_GP:OFJ80348.1;Name=OFJ80348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744778.1;locus_tag=HMPREF2844_04990;product=histidine kinase;protein_id=OFJ80348.1;transl_table=11 KV808209.1 Genbank gene 74821 75711 . + . ID=gene-HMPREF2844_04995;Name=HMPREF2844_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_04995 KV808209.1 Protein Homology CDS 74821 75711 . + 0 ID=cds-OFJ80349.1;Parent=gene-HMPREF2844_04995;Dbxref=NCBI_GP:OFJ80349.1;Name=OFJ80349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310810.1;locus_tag=HMPREF2844_04995;product=LysR family transcriptional regulator;protein_id=OFJ80349.1;transl_table=11 KV808209.1 Genbank gene 75708 75986 . + . ID=gene-HMPREF2844_05000;Name=HMPREF2844_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05000 KV808209.1 Protein Homology CDS 75708 75986 . + 0 ID=cds-OFJ80350.1;Parent=gene-HMPREF2844_05000;Dbxref=NCBI_GP:OFJ80350.1;Name=OFJ80350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744780.1;locus_tag=HMPREF2844_05000;product=hypothetical protein;protein_id=OFJ80350.1;transl_table=11 KV808209.1 Genbank gene 76154 76774 . + . ID=gene-HMPREF2844_05005;Name=HMPREF2844_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05005 KV808209.1 Protein Homology CDS 76154 76774 . + 0 ID=cds-OFJ80351.1;Parent=gene-HMPREF2844_05005;Dbxref=NCBI_GP:OFJ80351.1;Name=OFJ80351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744782.1;locus_tag=HMPREF2844_05005;product=hypothetical protein;protein_id=OFJ80351.1;transl_table=11 KV808209.1 Genbank gene 77967 78311 . + . ID=gene-HMPREF2844_05010;Name=HMPREF2844_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05010 KV808209.1 GeneMarkS+ CDS 77967 78311 . + 0 ID=cds-OFJ80352.1;Parent=gene-HMPREF2844_05010;Dbxref=NCBI_GP:OFJ80352.1;Name=OFJ80352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05010;product=hypothetical protein;protein_id=OFJ80352.1;transl_table=11 KV808209.1 Genbank gene 78671 83405 . + . ID=gene-HMPREF2844_05015;Name=HMPREF2844_05015;end_range=83405,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05015;partial=true KV808209.1 GeneMarkS+ CDS 78671 83405 . + 0 ID=cds-OFJ80353.1;Parent=gene-HMPREF2844_05015;Dbxref=NCBI_GP:OFJ80353.1;Name=OFJ80353.1;end_range=83405,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05015;partial=true;product=hypothetical protein;protein_id=OFJ80353.1;transl_table=11 ##sequence-region KV808210.1 1 17075 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808210.1 Genbank region 1 17075 . + . ID=KV808210.1:1..17075;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808210.1 Genbank gene 784 984 . - . ID=gene-HMPREF2844_05020;Name=HMPREF2844_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05020 KV808210.1 Protein Homology CDS 784 984 . - 0 ID=cds-OFJ80236.1;Parent=gene-HMPREF2844_05020;Dbxref=NCBI_GP:OFJ80236.1;Name=OFJ80236.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239016.1;locus_tag=HMPREF2844_05020;product=hypothetical protein;protein_id=OFJ80236.1;transl_table=11 KV808210.1 Genbank gene 1141 2280 . + . ID=gene-HMPREF2844_05025;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=HMPREF2844_05025 KV808210.1 Protein Homology CDS 1141 2280 . + 0 ID=cds-OFJ80237.1;Parent=gene-HMPREF2844_05025;Dbxref=NCBI_GP:OFJ80237.1;Name=OFJ80237.1;Note=Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine;gbkey=CDS;gene=metX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759892.1;locus_tag=HMPREF2844_05025;product=homoserine O-acetyltransferase;protein_id=OFJ80237.1;transl_table=11 KV808210.1 Genbank gene 2277 2858 . + . ID=gene-HMPREF2844_05030;Name=HMPREF2844_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05030 KV808210.1 Protein Homology CDS 2277 2858 . + 0 ID=cds-OFJ80238.1;Parent=gene-HMPREF2844_05030;Dbxref=NCBI_GP:OFJ80238.1;Name=OFJ80238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002229346.1;locus_tag=HMPREF2844_05030;product=methionine biosynthesis protein MetW;protein_id=OFJ80238.1;transl_table=11 KV808210.1 Genbank gene 3683 5683 . - . ID=gene-HMPREF2844_05035;Name=HMPREF2844_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05035 KV808210.1 Protein Homology CDS 3683 5683 . - 0 ID=cds-OFJ80239.1;Parent=gene-HMPREF2844_05035;Dbxref=NCBI_GP:OFJ80239.1;Name=OFJ80239.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759174.1;locus_tag=HMPREF2844_05035;product=ATP-dependent DNA helicase Rep;protein_id=OFJ80239.1;transl_table=11 KV808210.1 Genbank gene 5815 6672 . - . ID=gene-HMPREF2844_05040;Name=HMPREF2844_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05040 KV808210.1 Protein Homology CDS 5815 6672 . - 0 ID=cds-OFJ80240.1;Parent=gene-HMPREF2844_05040;Dbxref=NCBI_GP:OFJ80240.1;Name=OFJ80240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519954.1;locus_tag=HMPREF2844_05040;product=tRNA-modifying protein;protein_id=OFJ80240.1;transl_table=11 KV808210.1 Genbank gene 6793 7146 . + . ID=gene-HMPREF2844_05045;Name=HMPREF2844_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05045 KV808210.1 Protein Homology CDS 6793 7146 . + 0 ID=cds-OFJ80241.1;Parent=gene-HMPREF2844_05045;Dbxref=NCBI_GP:OFJ80241.1;Name=OFJ80241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743267.1;locus_tag=HMPREF2844_05045;product=arsenate reductase;protein_id=OFJ80241.1;transl_table=11 KV808210.1 Genbank gene 7228 8763 . + . ID=gene-HMPREF2844_05050;Name=HMPREF2844_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05050 KV808210.1 Protein Homology CDS 7228 8763 . + 0 ID=cds-OFJ80242.1;Parent=gene-HMPREF2844_05050;Dbxref=NCBI_GP:OFJ80242.1;Name=OFJ80242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519736.1;locus_tag=HMPREF2844_05050;product=peptidylprolyl isomerase;protein_id=OFJ80242.1;transl_table=11 KV808210.1 Genbank gene 8840 9460 . + . ID=gene-HMPREF2844_05055;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF2844_05055 KV808210.1 Protein Homology CDS 8840 9460 . + 0 ID=cds-OFJ80243.1;Parent=gene-HMPREF2844_05055;Dbxref=NCBI_GP:OFJ80243.1;Name=OFJ80243.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271210.1;locus_tag=HMPREF2844_05055;product=recombination protein RecR;protein_id=OFJ80243.1;transl_table=11 KV808210.1 Genbank gene 9553 9837 . - . ID=gene-HMPREF2844_05060;Name=HMPREF2844_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05060 KV808210.1 Protein Homology CDS 9553 9837 . - 0 ID=cds-OFJ80244.1;Parent=gene-HMPREF2844_05060;Dbxref=NCBI_GP:OFJ80244.1;Name=OFJ80244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683377.1;locus_tag=HMPREF2844_05060;product=hypothetical protein;protein_id=OFJ80244.1;transl_table=11 KV808210.1 Genbank gene 10051 11301 . + . ID=gene-HMPREF2844_05065;Name=HMPREF2844_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05065 KV808210.1 Protein Homology CDS 10051 11301 . + 0 ID=cds-OFJ80245.1;Parent=gene-HMPREF2844_05065;Dbxref=NCBI_GP:OFJ80245.1;Name=OFJ80245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519734.1;locus_tag=HMPREF2844_05065;product=permease;protein_id=OFJ80245.1;transl_table=11 KV808210.1 Genbank gene 11294 11980 . + . ID=gene-HMPREF2844_05070;Name=HMPREF2844_05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05070 KV808210.1 Protein Homology CDS 11294 11980 . + 0 ID=cds-OFJ80246.1;Parent=gene-HMPREF2844_05070;Dbxref=NCBI_GP:OFJ80246.1;Name=OFJ80246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743262.1;locus_tag=HMPREF2844_05070;product=lipoprotein ABC transporter ATP-binding protein;protein_id=OFJ80246.1;transl_table=11 KV808210.1 Genbank gene 12097 12834 . - . ID=gene-HMPREF2844_05075;Name=HMPREF2844_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05075 KV808210.1 Protein Homology CDS 12097 12834 . - 0 ID=cds-OFJ80247.1;Parent=gene-HMPREF2844_05075;Dbxref=NCBI_GP:OFJ80247.1;Name=OFJ80247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173436.1;locus_tag=HMPREF2844_05075;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase;protein_id=OFJ80247.1;transl_table=11 KV808210.1 Genbank gene 12878 12997 . - . ID=gene-HMPREF2844_05080;Name=HMPREF2844_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05080 KV808210.1 Protein Homology CDS 12878 12997 . - 0 ID=cds-OFJ80248.1;Parent=gene-HMPREF2844_05080;Dbxref=NCBI_GP:OFJ80248.1;Name=OFJ80248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743260.1;locus_tag=HMPREF2844_05080;product=ribonuclease Z;protein_id=OFJ80248.1;transl_table=11 KV808210.1 Genbank gene 13018 13458 . - . ID=gene-HMPREF2844_05085;Name=HMPREF2844_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05085 KV808210.1 Protein Homology CDS 13018 13458 . - 0 ID=cds-OFJ80249.1;Parent=gene-HMPREF2844_05085;Dbxref=NCBI_GP:OFJ80249.1;Name=OFJ80249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687913.1;locus_tag=HMPREF2844_05085;product=hypothetical protein;protein_id=OFJ80249.1;transl_table=11 KV808210.1 Genbank gene 13820 15106 . - . ID=gene-HMPREF2844_05090;Name=HMPREF2844_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05090 KV808210.1 Protein Homology CDS 13820 15106 . - 0 ID=cds-OFJ80250.1;Parent=gene-HMPREF2844_05090;Dbxref=NCBI_GP:OFJ80250.1;Name=OFJ80250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693022.1;locus_tag=HMPREF2844_05090;product=serine protease;protein_id=OFJ80250.1;transl_table=11 KV808210.1 Genbank gene 15445 16773 . + . ID=gene-HMPREF2844_05095;Name=HMPREF2844_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05095 KV808210.1 Protein Homology CDS 15445 16773 . + 0 ID=cds-OFJ80251.1;Parent=gene-HMPREF2844_05095;Dbxref=NCBI_GP:OFJ80251.1;Name=OFJ80251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747117.1;locus_tag=HMPREF2844_05095;product=C4-dicarboxylate ABC transporter;protein_id=OFJ80251.1;transl_table=11 ##sequence-region KV808211.1 1 243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808211.1 Genbank region 1 243 . + . ID=KV808211.1:1..243;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808211.1 Genbank gene 2 77 . + . ID=gene-HMPREF2844_05100;Name=HMPREF2844_05100;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05100 KV808211.1 tRNAscan-SE tRNA 2 77 . + . ID=rna-HMPREF2844_05100;Parent=gene-HMPREF2844_05100;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05100;product=tRNA-Gly KV808211.1 tRNAscan-SE exon 2 77 . + . ID=exon-HMPREF2844_05100-1;Parent=rna-HMPREF2844_05100;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05100;product=tRNA-Gly KV808211.1 Genbank gene 100 175 . + . ID=gene-HMPREF2844_05105;Name=HMPREF2844_05105;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05105 KV808211.1 tRNAscan-SE tRNA 100 175 . + . ID=rna-HMPREF2844_05105;Parent=gene-HMPREF2844_05105;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05105;product=tRNA-Gly KV808211.1 tRNAscan-SE exon 100 175 . + . ID=exon-HMPREF2844_05105-1;Parent=rna-HMPREF2844_05105;anticodon=(pos:133..135);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05105;product=tRNA-Gly ##sequence-region KV808212.1 1 15598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808212.1 Genbank region 1 15598 . + . ID=KV808212.1:1..15598;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808212.1 Genbank gene 83 1114 . - . ID=gene-HMPREF2844_05110;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=HMPREF2844_05110 KV808212.1 Protein Homology CDS 83 1114 . - 0 ID=cds-OFJ80176.1;Parent=gene-HMPREF2844_05110;Dbxref=NCBI_GP:OFJ80176.1;Name=OFJ80176.1;Note=required for glycolysis%3B catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=gapA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448262.1;locus_tag=HMPREF2844_05110;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OFJ80176.1;transl_table=11 KV808212.1 Genbank gene 1310 1828 . + . ID=gene-HMPREF2844_05115;Name=HMPREF2844_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05115 KV808212.1 Protein Homology CDS 1310 1828 . + 0 ID=cds-OFJ80187.1;Parent=gene-HMPREF2844_05115;Dbxref=NCBI_GP:OFJ80187.1;Name=OFJ80187.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743525.1;locus_tag=HMPREF2844_05115;product=thioredoxin;protein_id=OFJ80187.1;transl_table=11 KV808212.1 Genbank gene 2169 2606 . + . ID=gene-HMPREF2844_05120;Name=HMPREF2844_05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05120 KV808212.1 Protein Homology CDS 2169 2606 . + 0 ID=cds-OFJ80177.1;Parent=gene-HMPREF2844_05120;Dbxref=NCBI_GP:OFJ80177.1;Name=OFJ80177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684610.1;locus_tag=HMPREF2844_05120;product=transcriptional regulator;protein_id=OFJ80177.1;transl_table=11 KV808212.1 Genbank gene 2620 3120 . + . ID=gene-HMPREF2844_05125;Name=HMPREF2844_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05125 KV808212.1 Protein Homology CDS 2620 3120 . + 0 ID=cds-OFJ80178.1;Parent=gene-HMPREF2844_05125;Dbxref=NCBI_GP:OFJ80178.1;Name=OFJ80178.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743529.1;locus_tag=HMPREF2844_05125;product=4-hydroxyphenylacetate 3-monooxygenase reductase subunit;protein_id=OFJ80178.1;transl_table=11 KV808212.1 Genbank gene 3246 3941 . + . ID=gene-HMPREF2844_05130;Name=HMPREF2844_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05130 KV808212.1 Protein Homology CDS 3246 3941 . + 0 ID=cds-OFJ80179.1;Parent=gene-HMPREF2844_05130;Dbxref=NCBI_GP:OFJ80179.1;Name=OFJ80179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285640.1;locus_tag=HMPREF2844_05130;product=mannose-1-phosphate guanylyltransferase;protein_id=OFJ80179.1;transl_table=11 KV808212.1 Genbank gene 4018 4917 . - . ID=gene-HMPREF2844_05135;Name=HMPREF2844_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05135 KV808212.1 Protein Homology CDS 4018 4917 . - 0 ID=cds-OFJ80180.1;Parent=gene-HMPREF2844_05135;Dbxref=NCBI_GP:OFJ80180.1;Name=OFJ80180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686574.1;locus_tag=HMPREF2844_05135;product=protein RarD;protein_id=OFJ80180.1;transl_table=11 KV808212.1 Genbank gene 5187 5729 . - . ID=gene-HMPREF2844_05140;Name=HMPREF2844_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05140 KV808212.1 Protein Homology CDS 5187 5729 . - 0 ID=cds-OFJ80181.1;Parent=gene-HMPREF2844_05140;Dbxref=NCBI_GP:OFJ80181.1;Name=OFJ80181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745037.1;locus_tag=HMPREF2844_05140;product=hypothetical protein;protein_id=OFJ80181.1;transl_table=11 KV808212.1 Genbank gene 5955 6461 . - . ID=gene-HMPREF2844_05145;Name=HMPREF2844_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05145 KV808212.1 Protein Homology CDS 5955 6461 . - 0 ID=cds-OFJ80182.1;Parent=gene-HMPREF2844_05145;Dbxref=NCBI_GP:OFJ80182.1;Name=OFJ80182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXL8.1;locus_tag=HMPREF2844_05145;product=S-ribosylhomocysteinase;protein_id=OFJ80182.1;transl_table=11 KV808212.1 Genbank gene 6516 6839 . - . ID=gene-HMPREF2844_05150;Name=HMPREF2844_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05150 KV808212.1 Protein Homology CDS 6516 6839 . - 0 ID=cds-OFJ80183.1;Parent=gene-HMPREF2844_05150;Dbxref=NCBI_GP:OFJ80183.1;Name=OFJ80183.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686572.1;locus_tag=HMPREF2844_05150;product=iron donor protein CyaY;protein_id=OFJ80183.1;transl_table=11 KV808212.1 Genbank gene 6910 7080 . + . ID=gene-HMPREF2844_05155;Name=HMPREF2844_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05155 KV808212.1 Protein Homology CDS 6910 7080 . + 0 ID=cds-OFJ80184.1;Parent=gene-HMPREF2844_05155;Dbxref=NCBI_GP:OFJ80184.1;Name=OFJ80184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745044.1;locus_tag=HMPREF2844_05155;product=prokaryotic lipo-attachment site family protein;protein_id=OFJ80184.1;transl_table=11 KV808212.1 Genbank gene 7092 8312 . + . ID=gene-HMPREF2844_05160;Name=HMPREF2844_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05160 KV808212.1 Protein Homology CDS 7092 8312 . + 0 ID=cds-OFJ80185.1;Parent=gene-HMPREF2844_05160;Dbxref=NCBI_GP:OFJ80185.1;Name=OFJ80185.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010356219.1;locus_tag=HMPREF2844_05160;product=diaminopimelate decarboxylase;protein_id=OFJ80185.1;transl_table=11 KV808212.1 Genbank gene 8360 8899 . + . ID=gene-HMPREF2844_05165;Name=HMPREF2844_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05165 KV808212.1 Protein Homology CDS 8360 8899 . + 0 ID=cds-OFJ80186.1;Parent=gene-HMPREF2844_05165;Dbxref=NCBI_GP:OFJ80186.1;Name=OFJ80186.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761465.1;locus_tag=HMPREF2844_05165;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=OFJ80186.1;transl_table=11 KV808212.1 Genbank pseudogene 9920 11379 . - . ID=gene-HMPREF2844_05170;Name=HMPREF2844_05170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05170;pseudo=true KV808212.1 Protein Homology CDS 9920 11379 . - 0 ID=cds-HMPREF2844_05170;Parent=gene-HMPREF2844_05170;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311073.1;locus_tag=HMPREF2844_05170;product=carbonate dehydratase;pseudo=true;transl_table=11 KV808212.1 Genbank gene 11480 12169 . - . ID=gene-HMPREF2844_05175;Name=HMPREF2844_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05175 KV808212.1 Protein Homology CDS 11480 12169 . - 0 ID=cds-OFJ80008.1;Parent=gene-HMPREF2844_05175;Dbxref=NCBI_GP:OFJ80008.1;Name=OFJ80008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776553.1;locus_tag=HMPREF2844_05175;product=carbonic anhydrase;protein_id=OFJ80008.1;transl_table=11 KV808212.1 Genbank gene 12320 13561 . + . ID=gene-HMPREF2844_05180;Name=HMPREF2844_05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05180 KV808212.1 Protein Homology CDS 12320 13561 . + 0 ID=cds-OFJ80009.1;Parent=gene-HMPREF2844_05180;Dbxref=NCBI_GP:OFJ80009.1;Name=OFJ80009.1;Note=tryptophan transporter of high affinity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749145.1;locus_tag=HMPREF2844_05180;product=tryptophan permease;protein_id=OFJ80009.1;transl_table=11 KV808212.1 Genbank gene 13821 15323 . + . ID=gene-HMPREF2844_05185;Name=HMPREF2844_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05185 KV808212.1 Protein Homology CDS 13821 15323 . + 0 ID=cds-OFJ80010.1;Parent=gene-HMPREF2844_05185;Dbxref=NCBI_GP:OFJ80010.1;Name=OFJ80010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709725.1;locus_tag=HMPREF2844_05185;product=phosphate acetyltransferase;protein_id=OFJ80010.1;transl_table=11 ##sequence-region KV808213.1 1 336 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808213.1 Genbank region 1 336 . + . ID=KV808213.1:1..336;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808213.1 Genbank gene 53 310 . + . ID=gene-HMPREF2844_05190;Name=HMPREF2844_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05190 KV808213.1 Protein Homology CDS 53 310 . + 0 ID=cds-OFJ79996.1;Parent=gene-HMPREF2844_05190;Dbxref=NCBI_GP:OFJ79996.1;Name=OFJ79996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687622.1;locus_tag=HMPREF2844_05190;product=hypothetical protein;protein_id=OFJ79996.1;transl_table=11 ##sequence-region KV808214.1 1 2089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808214.1 Genbank region 1 2089 . + . ID=KV808214.1:1..2089;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808214.1 Genbank gene 317 853 . + . ID=gene-HMPREF2844_05195;Name=HMPREF2844_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05195 KV808214.1 Protein Homology CDS 317 853 . + 0 ID=cds-OFJ79990.1;Parent=gene-HMPREF2844_05195;Dbxref=NCBI_GP:OFJ79990.1;Name=OFJ79990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777705.1;locus_tag=HMPREF2844_05195;product=hypothetical protein;protein_id=OFJ79990.1;transl_table=11 KV808214.1 Genbank gene 1151 1687 . - . ID=gene-HMPREF2844_05200;Name=HMPREF2844_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05200 KV808214.1 Protein Homology CDS 1151 1687 . - 0 ID=cds-OFJ79991.1;Parent=gene-HMPREF2844_05200;Dbxref=NCBI_GP:OFJ79991.1;Name=OFJ79991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686917.1;locus_tag=HMPREF2844_05200;product=hypothetical protein;protein_id=OFJ79991.1;transl_table=11 ##sequence-region KV808215.1 1 13203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808215.1 Genbank region 1 13203 . + . ID=KV808215.1:1..13203;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808215.1 Genbank gene 427 1242 . - . ID=gene-HMPREF2844_05205;Name=HMPREF2844_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05205 KV808215.1 Protein Homology CDS 427 1242 . - 0 ID=cds-OFJ79960.1;Parent=gene-HMPREF2844_05205;Dbxref=NCBI_GP:OFJ79960.1;Name=OFJ79960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685783.1;locus_tag=HMPREF2844_05205;product=squalene synthase HpnC;protein_id=OFJ79960.1;transl_table=11 KV808215.1 Genbank gene 1347 1910 . - . ID=gene-HMPREF2844_05210;Name=HMPREF2844_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05210 KV808215.1 Protein Homology CDS 1347 1910 . - 0 ID=cds-OFJ79947.1;Parent=gene-HMPREF2844_05210;Dbxref=NCBI_GP:OFJ79947.1;Name=OFJ79947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742456.1;locus_tag=HMPREF2844_05210;product=esterase;protein_id=OFJ79947.1;transl_table=11 KV808215.1 Genbank gene 2125 2487 . + . ID=gene-HMPREF2844_05215;Name=HMPREF2844_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05215 KV808215.1 Protein Homology CDS 2125 2487 . + 0 ID=cds-OFJ79948.1;Parent=gene-HMPREF2844_05215;Dbxref=NCBI_GP:OFJ79948.1;Name=OFJ79948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742457.1;locus_tag=HMPREF2844_05215;product=fluoride ion transporter CrcB;protein_id=OFJ79948.1;transl_table=11 KV808215.1 Genbank gene 2594 3283 . - . ID=gene-HMPREF2844_05220;Name=HMPREF2844_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05220 KV808215.1 Protein Homology CDS 2594 3283 . - 0 ID=cds-OFJ79949.1;Parent=gene-HMPREF2844_05220;Dbxref=NCBI_GP:OFJ79949.1;Name=OFJ79949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271308.1;locus_tag=HMPREF2844_05220;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFJ79949.1;transl_table=11 KV808215.1 Genbank gene 3280 3999 . - . ID=gene-HMPREF2844_05225;Name=HMPREF2844_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05225 KV808215.1 Protein Homology CDS 3280 3999 . - 0 ID=cds-OFJ79950.1;Parent=gene-HMPREF2844_05225;Dbxref=NCBI_GP:OFJ79950.1;Name=OFJ79950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687593.1;locus_tag=HMPREF2844_05225;product=DNA polymerase III subunit epsilon;protein_id=OFJ79950.1;transl_table=11 KV808215.1 Genbank gene 4401 4883 . + . ID=gene-HMPREF2844_05230;Name=HMPREF2844_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05230 KV808215.1 Protein Homology CDS 4401 4883 . + 0 ID=cds-OFJ79951.1;Parent=gene-HMPREF2844_05230;Dbxref=NCBI_GP:OFJ79951.1;Name=OFJ79951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519743.1;locus_tag=HMPREF2844_05230;product=hypothetical protein;protein_id=OFJ79951.1;transl_table=11 KV808215.1 Genbank gene 5058 5495 . + . ID=gene-HMPREF2844_05235;Name=HMPREF2844_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05235 KV808215.1 Protein Homology CDS 5058 5495 . + 0 ID=cds-OFJ79961.1;Parent=gene-HMPREF2844_05235;Dbxref=NCBI_GP:OFJ79961.1;Name=OFJ79961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678890.1;locus_tag=HMPREF2844_05235;product=YSIRK family Signal peptide;protein_id=OFJ79961.1;transl_table=11 KV808215.1 Genbank gene 5579 6613 . - . ID=gene-HMPREF2844_05240;Name=HMPREF2844_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05240 KV808215.1 Protein Homology CDS 5579 6613 . - 0 ID=cds-OFJ79952.1;Parent=gene-HMPREF2844_05240;Dbxref=NCBI_GP:OFJ79952.1;Name=OFJ79952.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213482.1;locus_tag=HMPREF2844_05240;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=OFJ79952.1;transl_table=11 KV808215.1 Genbank gene 6819 7889 . + . ID=gene-HMPREF2844_05245;Name=HMPREF2844_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05245 KV808215.1 Protein Homology CDS 6819 7889 . + 0 ID=cds-OFJ79953.1;Parent=gene-HMPREF2844_05245;Dbxref=NCBI_GP:OFJ79953.1;Name=OFJ79953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742466.1;locus_tag=HMPREF2844_05245;product=AI-2E family transporter;protein_id=OFJ79953.1;transl_table=11 KV808215.1 Genbank gene 7959 8132 . + . ID=gene-HMPREF2844_05250;Name=HMPREF2844_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05250 KV808215.1 Protein Homology CDS 7959 8132 . + 0 ID=cds-OFJ79954.1;Parent=gene-HMPREF2844_05250;Dbxref=NCBI_GP:OFJ79954.1;Name=OFJ79954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778028.1;locus_tag=HMPREF2844_05250;product=ABC transporter permease;protein_id=OFJ79954.1;transl_table=11 KV808215.1 Genbank gene 8155 8871 . + . ID=gene-HMPREF2844_05255;Name=HMPREF2844_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05255 KV808215.1 Protein Homology CDS 8155 8871 . + 0 ID=cds-OFJ79955.1;Parent=gene-HMPREF2844_05255;Dbxref=NCBI_GP:OFJ79955.1;Name=OFJ79955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746659.1;locus_tag=HMPREF2844_05255;product=5'-methylthioadenosine phosphorylase;protein_id=OFJ79955.1;transl_table=11 KV808215.1 Genbank gene 9115 11391 . - . ID=gene-HMPREF2844_05260;Name=HMPREF2844_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05260 KV808215.1 Protein Homology CDS 9115 11391 . - 0 ID=cds-OFJ79956.1;Parent=gene-HMPREF2844_05260;Dbxref=NCBI_GP:OFJ79956.1;Name=OFJ79956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449127.1;locus_tag=HMPREF2844_05260;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=OFJ79956.1;transl_table=11 KV808215.1 Genbank gene 11527 12405 . - . ID=gene-HMPREF2844_05265;Name=HMPREF2844_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05265 KV808215.1 Protein Homology CDS 11527 12405 . - 0 ID=cds-OFJ79957.1;Parent=gene-HMPREF2844_05265;Dbxref=NCBI_GP:OFJ79957.1;Name=OFJ79957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002248279.1;locus_tag=HMPREF2844_05265;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=OFJ79957.1;transl_table=11 KV808215.1 Genbank gene 12502 12741 . + . ID=gene-HMPREF2844_05270;Name=HMPREF2844_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05270 KV808215.1 GeneMarkS+ CDS 12502 12741 . + 0 ID=cds-OFJ79958.1;Parent=gene-HMPREF2844_05270;Dbxref=NCBI_GP:OFJ79958.1;Name=OFJ79958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05270;product=hypothetical protein;protein_id=OFJ79958.1;transl_table=11 KV808215.1 Genbank gene 12749 12946 . - . ID=gene-HMPREF2844_05275;Name=HMPREF2844_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05275 KV808215.1 Protein Homology CDS 12749 12946 . - 0 ID=cds-OFJ79959.1;Parent=gene-HMPREF2844_05275;Dbxref=NCBI_GP:OFJ79959.1;Name=OFJ79959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284930.1;locus_tag=HMPREF2844_05275;product=Fe-S assembly protein IscX;protein_id=OFJ79959.1;transl_table=11 ##sequence-region KV808216.1 1 1097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808216.1 Genbank region 1 1097 . + . ID=KV808216.1:1..1097;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808216.1 Genbank gene 1 1097 . - . ID=gene-HMPREF2844_05280;Name=tuf;end_range=1097,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF2844_05280;partial=true;start_range=.,1 KV808216.1 Protein Homology CDS 1 1097 . - 0 ID=cds-OFJ79942.1;Parent=gene-HMPREF2844_05280;Dbxref=NCBI_GP:OFJ79942.1;Name=OFJ79942.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;end_range=1097,.;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242184.1;locus_tag=HMPREF2844_05280;partial=true;product=elongation factor Tu;protein_id=OFJ79942.1;start_range=.,1;transl_table=11 ##sequence-region KV808217.1 1 3038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808217.1 Genbank region 1 3038 . + . ID=KV808217.1:1..3038;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808217.1 Genbank pseudogene 1 473 . - . ID=gene-HMPREF2844_05285;Name=HMPREF2844_05285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05285;pseudo=true KV808217.1 Protein Homology CDS 1 473 . - 0 ID=cds-HMPREF2844_05285;Parent=gene-HMPREF2844_05285;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520259.1;locus_tag=HMPREF2844_05285;product=NTPase;pseudo=true;transl_table=11 KV808217.1 Genbank gene 740 2635 . - . ID=gene-HMPREF2844_05290;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF2844_05290 KV808217.1 Protein Homology CDS 740 2635 . - 0 ID=cds-OFJ79936.1;Parent=gene-HMPREF2844_05290;Dbxref=NCBI_GP:OFJ79936.1;Name=OFJ79936.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270047.1;locus_tag=HMPREF2844_05290;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG;protein_id=OFJ79936.1;transl_table=11 ##sequence-region KV808218.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808218.1 Genbank region 1 737 . + . ID=KV808218.1:1..737;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808218.1 Genbank gene 126 470 . + . ID=gene-HMPREF2844_05295;Name=HMPREF2844_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05295 KV808218.1 Protein Homology CDS 126 470 . + 0 ID=cds-OFJ79910.1;Parent=gene-HMPREF2844_05295;Dbxref=NCBI_GP:OFJ79910.1;Name=OFJ79910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003823939.1;locus_tag=HMPREF2844_05295;product=mannose-1-phosphate guanylyltransferase;protein_id=OFJ79910.1;transl_table=11 ##sequence-region KV808219.1 1 405 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808219.1 Genbank region 1 405 . + . ID=KV808219.1:1..405;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808219.1 Genbank pseudogene 1 405 . - . ID=gene-HMPREF2844_05300;Name=HMPREF2844_05300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05300;pseudo=true KV808219.1 Protein Homology CDS 1 405 . - 2 ID=cds-HMPREF2844_05300;Parent=gene-HMPREF2844_05300;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269932.1;locus_tag=HMPREF2844_05300;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV808220.1 1 12849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808220.1 Genbank region 1 12849 . + . ID=KV808220.1:1..12849;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808220.1 Genbank gene 57 1181 . - . ID=gene-HMPREF2844_05305;Name=HMPREF2844_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05305 KV808220.1 Protein Homology CDS 57 1181 . - 0 ID=cds-OFJ79762.1;Parent=gene-HMPREF2844_05305;Dbxref=NCBI_GP:OFJ79762.1;Name=OFJ79762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702021.1;locus_tag=HMPREF2844_05305;product=cell filamentation protein Fic;protein_id=OFJ79762.1;transl_table=11 KV808220.1 Genbank gene 1479 3155 . + . ID=gene-HMPREF2844_05310;Name=HMPREF2844_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05310 KV808220.1 Protein Homology CDS 1479 3155 . + 0 ID=cds-OFJ79763.1;Parent=gene-HMPREF2844_05310;Dbxref=NCBI_GP:OFJ79763.1;Name=OFJ79763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232796.1;locus_tag=HMPREF2844_05310;product=energy-dependent translational throttle protein EttA;protein_id=OFJ79763.1;transl_table=11 KV808220.1 Genbank gene 3332 4234 . - . ID=gene-HMPREF2844_05315;Name=HMPREF2844_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05315 KV808220.1 Protein Homology CDS 3332 4234 . - 0 ID=cds-OFJ79764.1;Parent=gene-HMPREF2844_05315;Dbxref=NCBI_GP:OFJ79764.1;Name=OFJ79764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741510.1;locus_tag=HMPREF2844_05315;product=ribokinase;protein_id=OFJ79764.1;transl_table=11 KV808220.1 Genbank gene 4691 8125 . + . ID=gene-HMPREF2844_05320;Name=HMPREF2844_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05320 KV808220.1 Protein Homology CDS 4691 8125 . + 0 ID=cds-OFJ79765.1;Parent=gene-HMPREF2844_05320;Dbxref=NCBI_GP:OFJ79765.1;Name=OFJ79765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017628914.1;locus_tag=HMPREF2844_05320;product=DNA polymerase III subunit alpha;protein_id=OFJ79765.1;transl_table=11 KV808220.1 Genbank gene 8467 8928 . + . ID=gene-HMPREF2844_05325;Name=HMPREF2844_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05325 KV808220.1 Protein Homology CDS 8467 8928 . + 0 ID=cds-OFJ79766.1;Parent=gene-HMPREF2844_05325;Dbxref=NCBI_GP:OFJ79766.1;Name=OFJ79766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759923.1;locus_tag=HMPREF2844_05325;product=hypothetical protein;protein_id=OFJ79766.1;transl_table=11 KV808220.1 Genbank gene 8988 9419 . + . ID=gene-HMPREF2844_05330;Name=HMPREF2844_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05330 KV808220.1 Protein Homology CDS 8988 9419 . + 0 ID=cds-OFJ79767.1;Parent=gene-HMPREF2844_05330;Dbxref=NCBI_GP:OFJ79767.1;Name=OFJ79767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768810.1;locus_tag=HMPREF2844_05330;product=hypothetical protein;protein_id=OFJ79767.1;transl_table=11 KV808220.1 Genbank gene 9502 10011 . + . ID=gene-HMPREF2844_05335;Name=HMPREF2844_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05335 KV808220.1 Protein Homology CDS 9502 10011 . + 0 ID=cds-OFJ79768.1;Parent=gene-HMPREF2844_05335;Dbxref=NCBI_GP:OFJ79768.1;Name=OFJ79768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227091.1;locus_tag=HMPREF2844_05335;product=hypothetical protein;protein_id=OFJ79768.1;transl_table=11 KV808220.1 Genbank gene 10517 11995 . + . ID=gene-HMPREF2844_05340;Name=HMPREF2844_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05340 KV808220.1 Protein Homology CDS 10517 11995 . + 0 ID=cds-OFJ79759.1;Parent=gene-HMPREF2844_05340;Dbxref=NCBI_GP:OFJ79759.1;Name=OFJ79759.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245667.1;locus_tag=HMPREF2844_05340;product=3-octaprenyl-4-hydroxybenzoate decarboxylase;protein_id=OFJ79759.1;transl_table=11 KV808220.1 Genbank gene 12228 12479 . + . ID=gene-HMPREF2844_05345;Name=HMPREF2844_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05345 KV808220.1 Protein Homology CDS 12228 12479 . + 0 ID=cds-OFJ79760.1;Parent=gene-HMPREF2844_05345;Dbxref=NCBI_GP:OFJ79760.1;Name=OFJ79760.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271582.1;locus_tag=HMPREF2844_05345;product=hypothetical protein;protein_id=OFJ79760.1;transl_table=11 ##sequence-region KV808221.1 1 31413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808221.1 Genbank region 1 31413 . + . ID=KV808221.1:1..31413;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808221.1 Genbank gene 59 370 . + . ID=gene-HMPREF2844_05350;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF2844_05350 KV808221.1 Protein Homology CDS 59 370 . + 0 ID=cds-OFJ79674.1;Parent=gene-HMPREF2844_05350;Dbxref=NCBI_GP:OFJ79674.1;Name=OFJ79674.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014235480.1;locus_tag=HMPREF2844_05350;product=30S ribosomal protein S10;protein_id=OFJ79674.1;transl_table=11 KV808221.1 Genbank gene 720 1622 . - . ID=gene-HMPREF2844_05355;Name=HMPREF2844_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05355 KV808221.1 Protein Homology CDS 720 1622 . - 0 ID=cds-OFJ79675.1;Parent=gene-HMPREF2844_05355;Dbxref=NCBI_GP:OFJ79675.1;Name=OFJ79675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745234.1;locus_tag=HMPREF2844_05355;product=hypothetical protein;protein_id=OFJ79675.1;transl_table=11 KV808221.1 Genbank gene 1876 2595 . + . ID=gene-HMPREF2844_05360;Name=HMPREF2844_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05360 KV808221.1 Protein Homology CDS 1876 2595 . + 0 ID=cds-OFJ79676.1;Parent=gene-HMPREF2844_05360;Dbxref=NCBI_GP:OFJ79676.1;Name=OFJ79676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779893.1;locus_tag=HMPREF2844_05360;product=bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase;protein_id=OFJ79676.1;transl_table=11 KV808221.1 Genbank gene 2691 3641 . - . ID=gene-HMPREF2844_05365;Name=HMPREF2844_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05365 KV808221.1 Protein Homology CDS 2691 3641 . - 0 ID=cds-OFJ79677.1;Parent=gene-HMPREF2844_05365;Dbxref=NCBI_GP:OFJ79677.1;Name=OFJ79677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686472.1;locus_tag=HMPREF2844_05365;product=bile acid:sodium symporter;protein_id=OFJ79677.1;transl_table=11 KV808221.1 Genbank gene 4052 5272 . + . ID=gene-HMPREF2844_05370;Name=HMPREF2844_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05370 KV808221.1 Protein Homology CDS 4052 5272 . + 0 ID=cds-OFJ79678.1;Parent=gene-HMPREF2844_05370;Dbxref=NCBI_GP:OFJ79678.1;Name=OFJ79678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270600.1;locus_tag=HMPREF2844_05370;product=sodium/glutamate symporter;protein_id=OFJ79678.1;transl_table=11 KV808221.1 Genbank gene 5397 6404 . + . ID=gene-HMPREF2844_05375;Name=HMPREF2844_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05375 KV808221.1 Protein Homology CDS 5397 6404 . + 0 ID=cds-OFJ79679.1;Parent=gene-HMPREF2844_05375;Dbxref=NCBI_GP:OFJ79679.1;Name=OFJ79679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235351.1;locus_tag=HMPREF2844_05375;product=hypothetical protein;protein_id=OFJ79679.1;transl_table=11 KV808221.1 Genbank gene 6793 9408 . + . ID=gene-HMPREF2844_05380;Name=HMPREF2844_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05380 KV808221.1 Protein Homology CDS 6793 9408 . + 0 ID=cds-OFJ79680.1;Parent=gene-HMPREF2844_05380;Dbxref=NCBI_GP:OFJ79680.1;Name=OFJ79680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312619.1;locus_tag=HMPREF2844_05380;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=OFJ79680.1;transl_table=11 KV808221.1 Genbank gene 9736 10647 . - . ID=gene-HMPREF2844_05385;Name=HMPREF2844_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05385 KV808221.1 Protein Homology CDS 9736 10647 . - 0 ID=cds-OFJ79681.1;Parent=gene-HMPREF2844_05385;Dbxref=NCBI_GP:OFJ79681.1;Name=OFJ79681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270596.1;locus_tag=HMPREF2844_05385;product=AraC family transcriptional regulator;protein_id=OFJ79681.1;transl_table=11 KV808221.1 Genbank gene 11344 14076 . - . ID=gene-HMPREF2844_05390;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF2844_05390 KV808221.1 Protein Homology CDS 11344 14076 . - 0 ID=cds-OFJ79682.1;Parent=gene-HMPREF2844_05390;Dbxref=NCBI_GP:OFJ79682.1;Name=OFJ79682.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RNT1.1;locus_tag=HMPREF2844_05390;product=leucine--tRNA ligase;protein_id=OFJ79682.1;transl_table=11 KV808221.1 Genbank gene 14760 15896 . + . ID=gene-HMPREF2844_05395;Name=HMPREF2844_05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05395 KV808221.1 Protein Homology CDS 14760 15896 . + 0 ID=cds-OFJ79683.1;Parent=gene-HMPREF2844_05395;Dbxref=NCBI_GP:OFJ79683.1;Name=OFJ79683.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283242.1;locus_tag=HMPREF2844_05395;product=molecular chaperone DnaJ;protein_id=OFJ79683.1;transl_table=11 KV808221.1 Genbank gene 16288 17262 . - . ID=gene-HMPREF2844_05400;Name=HMPREF2844_05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05400 KV808221.1 Protein Homology CDS 16288 17262 . - 0 ID=cds-OFJ79684.1;Parent=gene-HMPREF2844_05400;Dbxref=NCBI_GP:OFJ79684.1;Name=OFJ79684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741396.1;locus_tag=HMPREF2844_05400;product=protease;protein_id=OFJ79684.1;transl_table=11 KV808221.1 Genbank gene 17344 18294 . - . ID=gene-HMPREF2844_05405;Name=HMPREF2844_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05405 KV808221.1 Protein Homology CDS 17344 18294 . - 0 ID=cds-OFJ79685.1;Parent=gene-HMPREF2844_05405;Dbxref=NCBI_GP:OFJ79685.1;Name=OFJ79685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684005.1;locus_tag=HMPREF2844_05405;product=alpha/beta hydrolase;protein_id=OFJ79685.1;transl_table=11 KV808221.1 Genbank gene 18294 18920 . - . ID=gene-HMPREF2844_05410;Name=HMPREF2844_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05410 KV808221.1 Protein Homology CDS 18294 18920 . - 0 ID=cds-OFJ79686.1;Parent=gene-HMPREF2844_05410;Dbxref=NCBI_GP:OFJ79686.1;Name=OFJ79686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741394.1;locus_tag=HMPREF2844_05410;product=phosphoesterase;protein_id=OFJ79686.1;transl_table=11 KV808221.1 Genbank gene 19016 19279 . + . ID=gene-HMPREF2844_05415;Name=HMPREF2844_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05415 KV808221.1 Protein Homology CDS 19016 19279 . + 0 ID=cds-OFJ79687.1;Parent=gene-HMPREF2844_05415;Dbxref=NCBI_GP:OFJ79687.1;Name=OFJ79687.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686461.1;locus_tag=HMPREF2844_05415;product=hypothetical protein;protein_id=OFJ79687.1;transl_table=11 KV808221.1 Genbank gene 19887 20873 . - . ID=gene-HMPREF2844_05420;Name=HMPREF2844_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05420 KV808221.1 Protein Homology CDS 19887 20873 . - 0 ID=cds-OFJ79688.1;Parent=gene-HMPREF2844_05420;Dbxref=NCBI_GP:OFJ79688.1;Name=OFJ79688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684047.1;locus_tag=HMPREF2844_05420;product=peptidylprolyl isomerase;protein_id=OFJ79688.1;transl_table=11 KV808221.1 Genbank gene 20870 23251 . - . ID=gene-HMPREF2844_05425;Name=HMPREF2844_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05425 KV808221.1 Protein Homology CDS 20870 23251 . - 0 ID=cds-OFJ79689.1;Parent=gene-HMPREF2844_05425;Dbxref=NCBI_GP:OFJ79689.1;Name=OFJ79689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741387.1;locus_tag=HMPREF2844_05425;product=LPS biosynthesis protein;protein_id=OFJ79689.1;transl_table=11 KV808221.1 Genbank gene 23348 24352 . + . ID=gene-HMPREF2844_05430;Name=HMPREF2844_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05430 KV808221.1 Protein Homology CDS 23348 24352 . + 0 ID=cds-OFJ79690.1;Parent=gene-HMPREF2844_05430;Dbxref=NCBI_GP:OFJ79690.1;Name=OFJ79690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312645.1;locus_tag=HMPREF2844_05430;product=aminoglycoside phosphotransferase;protein_id=OFJ79690.1;transl_table=11 KV808221.1 Genbank gene 24683 26158 . - . ID=gene-HMPREF2844_05435;Name=HMPREF2844_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05435 KV808221.1 Protein Homology CDS 24683 26158 . - 0 ID=cds-OFJ79691.1;Parent=gene-HMPREF2844_05435;Dbxref=NCBI_GP:OFJ79691.1;Name=OFJ79691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686457.1;locus_tag=HMPREF2844_05435;product=malate:quinone oxidoreductase;protein_id=OFJ79691.1;transl_table=11 KV808221.1 Genbank gene 26534 27121 . - . ID=gene-HMPREF2844_05440;Name=HMPREF2844_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05440 KV808221.1 Protein Homology CDS 26534 27121 . - 0 ID=cds-OFJ79692.1;Parent=gene-HMPREF2844_05440;Dbxref=NCBI_GP:OFJ79692.1;Name=OFJ79692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741382.1;locus_tag=HMPREF2844_05440;product=GCN5 family acetyltransferase;protein_id=OFJ79692.1;transl_table=11 KV808221.1 Genbank gene 27321 27911 . - . ID=gene-HMPREF2844_05445;Name=HMPREF2844_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05445 KV808221.1 Protein Homology CDS 27321 27911 . - 0 ID=cds-OFJ79693.1;Parent=gene-HMPREF2844_05445;Dbxref=NCBI_GP:OFJ79693.1;Name=OFJ79693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270050.1;locus_tag=HMPREF2844_05445;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=OFJ79693.1;transl_table=11 KV808221.1 Genbank gene 27989 28231 . + . ID=gene-HMPREF2844_05450;Name=HMPREF2844_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05450 KV808221.1 Protein Homology CDS 27989 28231 . + 0 ID=cds-OFJ79694.1;Parent=gene-HMPREF2844_05450;Dbxref=NCBI_GP:OFJ79694.1;Name=OFJ79694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776094.1;locus_tag=HMPREF2844_05450;product=hypothetical protein;protein_id=OFJ79694.1;transl_table=11 KV808221.1 Genbank gene 28405 29133 . + . ID=gene-HMPREF2844_05455;Name=HMPREF2844_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05455 KV808221.1 Protein Homology CDS 28405 29133 . + 0 ID=cds-OFJ79695.1;Parent=gene-HMPREF2844_05455;Dbxref=NCBI_GP:OFJ79695.1;Name=OFJ79695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219982.1;locus_tag=HMPREF2844_05455;product=30S ribosomal protein S2;protein_id=OFJ79695.1;transl_table=11 KV808221.1 Genbank gene 29257 30111 . + . ID=gene-HMPREF2844_05460;Name=HMPREF2844_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05460 KV808221.1 Protein Homology CDS 29257 30111 . + 0 ID=cds-OFJ79696.1;Parent=gene-HMPREF2844_05460;Dbxref=NCBI_GP:OFJ79696.1;Name=OFJ79696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795802.1;locus_tag=HMPREF2844_05460;product=elongation factor Ts;protein_id=OFJ79696.1;transl_table=11 KV808221.1 Genbank gene 30608 31327 . + . ID=gene-HMPREF2844_05465;Name=HMPREF2844_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05465 KV808221.1 Protein Homology CDS 30608 31327 . + 0 ID=cds-OFJ79697.1;Parent=gene-HMPREF2844_05465;Dbxref=NCBI_GP:OFJ79697.1;Name=OFJ79697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWH8.1;locus_tag=HMPREF2844_05465;product=UMP kinase;protein_id=OFJ79697.1;transl_table=11 ##sequence-region KV808222.1 1 33309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808222.1 Genbank region 1 33309 . + . ID=KV808222.1:1..33309;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808222.1 Genbank gene 693 938 . - . ID=gene-HMPREF2844_05470;Name=HMPREF2844_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05470 KV808222.1 Protein Homology CDS 693 938 . - 0 ID=cds-OFJ79634.1;Parent=gene-HMPREF2844_05470;Dbxref=NCBI_GP:OFJ79634.1;Name=OFJ79634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744798.1;locus_tag=HMPREF2844_05470;product=hypothetical protein;protein_id=OFJ79634.1;transl_table=11 KV808222.1 Genbank pseudogene 1187 1462 . - . ID=gene-HMPREF2844_05475;Name=HMPREF2844_05475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05475;pseudo=true KV808222.1 Protein Homology CDS 1187 1462 . - 0 ID=cds-HMPREF2844_05475;Parent=gene-HMPREF2844_05475;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767887.1;locus_tag=HMPREF2844_05475;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 KV808222.1 Genbank pseudogene 1601 2028 . - . ID=gene-HMPREF2844_05480;Name=HMPREF2844_05480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05480;pseudo=true KV808222.1 Protein Homology CDS 1601 2028 . - 0 ID=cds-HMPREF2844_05480;Parent=gene-HMPREF2844_05480;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273617.1;locus_tag=HMPREF2844_05480;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 KV808222.1 Genbank gene 2087 2362 . - . ID=gene-HMPREF2844_05485;Name=HMPREF2844_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05485 KV808222.1 Protein Homology CDS 2087 2362 . - 0 ID=cds-OFJ79626.1;Parent=gene-HMPREF2844_05485;Dbxref=NCBI_GP:OFJ79626.1;Name=OFJ79626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008793560.1;locus_tag=HMPREF2844_05485;product=hypothetical protein;protein_id=OFJ79626.1;transl_table=11 KV808222.1 Genbank gene 2570 2878 . - . ID=gene-HMPREF2844_05490;Name=HMPREF2844_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05490 KV808222.1 Protein Homology CDS 2570 2878 . - 0 ID=cds-OFJ79627.1;Parent=gene-HMPREF2844_05490;Dbxref=NCBI_GP:OFJ79627.1;Name=OFJ79627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006148291.1;locus_tag=HMPREF2844_05490;product=hypothetical protein;protein_id=OFJ79627.1;transl_table=11 KV808222.1 Genbank pseudogene 3103 3426 . - . ID=gene-HMPREF2844_05495;Name=HMPREF2844_05495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05495;pseudo=true KV808222.1 Protein Homology CDS 3103 3426 . - 0 ID=cds-HMPREF2844_05495;Parent=gene-HMPREF2844_05495;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767887.1;locus_tag=HMPREF2844_05495;product=hypothetical protein;pseudo=true;transl_table=11 KV808222.1 Genbank pseudogene 3565 4195 . - . ID=gene-HMPREF2844_05500;Name=HMPREF2844_05500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05500;pseudo=true KV808222.1 Protein Homology CDS 3565 4195 . - 1 ID=cds-HMPREF2844_05500;Parent=gene-HMPREF2844_05500;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761221.1;locus_tag=HMPREF2844_05500;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 KV808222.1 Genbank pseudogene 4296 4980 . - . ID=gene-HMPREF2844_05505;Name=HMPREF2844_05505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05505;pseudo=true KV808222.1 GeneMarkS+ CDS 4296 4980 . - 0 ID=cds-HMPREF2844_05505;Parent=gene-HMPREF2844_05505;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05505;product=hypothetical protein;pseudo=true;transl_table=11 KV808222.1 Genbank gene 5023 5358 . - . ID=gene-HMPREF2844_05510;Name=HMPREF2844_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05510 KV808222.1 Protein Homology CDS 5023 5358 . - 0 ID=cds-OFJ79546.1;Parent=gene-HMPREF2844_05510;Dbxref=NCBI_GP:OFJ79546.1;Name=OFJ79546.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779365.1;locus_tag=HMPREF2844_05510;product=hypothetical protein;protein_id=OFJ79546.1;transl_table=11 KV808222.1 Genbank pseudogene 5594 6798 . - . ID=gene-HMPREF2844_05515;Name=HMPREF2844_05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05515;pseudo=true KV808222.1 Protein Homology CDS 5594 6798 . - 2 ID=cds-HMPREF2844_05515;Parent=gene-HMPREF2844_05515;Note=incomplete%3B partial in the middle of a contig%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761221.1;locus_tag=HMPREF2844_05515;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 KV808222.1 Genbank pseudogene 6899 7240 . - . ID=gene-HMPREF2844_05520;Name=HMPREF2844_05520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05520;pseudo=true KV808222.1 GeneMarkS+ CDS 6899 7240 . - 2 ID=cds-HMPREF2844_05520;Parent=gene-HMPREF2844_05520;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05520;product=type IV secretion protein Rhs;pseudo=true;transl_table=11 KV808222.1 Genbank gene 7341 9519 . - . ID=gene-HMPREF2844_05525;Name=HMPREF2844_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05525;partial=true;start_range=.,7341 KV808222.1 Protein Homology CDS 7341 9519 . - 0 ID=cds-OFJ79493.1;Parent=gene-HMPREF2844_05525;Dbxref=NCBI_GP:OFJ79493.1;Name=OFJ79493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764164.1;locus_tag=HMPREF2844_05525;partial=true;product=sugar-binding protein;protein_id=OFJ79493.1;start_range=.,7341;transl_table=11 KV808222.1 Genbank gene 9603 10739 . - . ID=gene-HMPREF2844_05530;Name=HMPREF2844_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05530 KV808222.1 Protein Homology CDS 9603 10739 . - 0 ID=cds-OFJ79494.1;Parent=gene-HMPREF2844_05530;Dbxref=NCBI_GP:OFJ79494.1;Name=OFJ79494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311297.1;locus_tag=HMPREF2844_05530;product=hypothetical protein;protein_id=OFJ79494.1;transl_table=11 KV808222.1 Genbank gene 10752 13025 . - . ID=gene-HMPREF2844_05535;Name=HMPREF2844_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05535 KV808222.1 Protein Homology CDS 10752 13025 . - 0 ID=cds-OFJ79495.1;Parent=gene-HMPREF2844_05535;Dbxref=NCBI_GP:OFJ79495.1;Name=OFJ79495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311296.1;locus_tag=HMPREF2844_05535;product=type VI secretion protein Vgr;protein_id=OFJ79495.1;transl_table=11 KV808222.1 Genbank gene 13168 16725 . - . ID=gene-HMPREF2844_05540;Name=HMPREF2844_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05540 KV808222.1 Protein Homology CDS 13168 16725 . - 0 ID=cds-OFJ79496.1;Parent=gene-HMPREF2844_05540;Dbxref=NCBI_GP:OFJ79496.1;Name=OFJ79496.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311295.1;locus_tag=HMPREF2844_05540;product=type VI secretion protein;protein_id=OFJ79496.1;transl_table=11 KV808222.1 Genbank gene 16757 18022 . - . ID=gene-HMPREF2844_05545;Name=HMPREF2844_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05545 KV808222.1 Protein Homology CDS 16757 18022 . - 0 ID=cds-OFJ79497.1;Parent=gene-HMPREF2844_05545;Dbxref=NCBI_GP:OFJ79497.1;Name=OFJ79497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311294.1;locus_tag=HMPREF2844_05545;product=cell envelope biogenesis protein OmpA;protein_id=OFJ79497.1;transl_table=11 KV808222.1 Genbank gene 18047 19390 . - . ID=gene-HMPREF2844_05550;Name=HMPREF2844_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05550 KV808222.1 Protein Homology CDS 18047 19390 . - 0 ID=cds-OFJ79498.1;Parent=gene-HMPREF2844_05550;Dbxref=NCBI_GP:OFJ79498.1;Name=OFJ79498.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009115591.1;locus_tag=HMPREF2844_05550;product=type VI secretion protein;protein_id=OFJ79498.1;transl_table=11 KV808222.1 Genbank gene 19416 20042 . - . ID=gene-HMPREF2844_05555;Name=HMPREF2844_05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05555 KV808222.1 Protein Homology CDS 19416 20042 . - 0 ID=cds-OFJ79499.1;Parent=gene-HMPREF2844_05555;Dbxref=NCBI_GP:OFJ79499.1;Name=OFJ79499.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761742.1;locus_tag=HMPREF2844_05555;product=type VI secretion protein;protein_id=OFJ79499.1;transl_table=11 KV808222.1 Genbank gene 20171 22822 . - . ID=gene-HMPREF2844_05560;Name=HMPREF2844_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05560 KV808222.1 Protein Homology CDS 20171 22822 . - 0 ID=cds-OFJ79500.1;Parent=gene-HMPREF2844_05560;Dbxref=NCBI_GP:OFJ79500.1;Name=OFJ79500.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780325.1;locus_tag=HMPREF2844_05560;product=ClpV1 family T6SS ATPase;protein_id=OFJ79500.1;transl_table=11 KV808222.1 Genbank gene 22912 23952 . - . ID=gene-HMPREF2844_05565;Name=HMPREF2844_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05565 KV808222.1 Protein Homology CDS 22912 23952 . - 0 ID=cds-OFJ79501.1;Parent=gene-HMPREF2844_05565;Dbxref=NCBI_GP:OFJ79501.1;Name=OFJ79501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761738.1;locus_tag=HMPREF2844_05565;product=type VI secretion protein;protein_id=OFJ79501.1;transl_table=11 KV808222.1 Genbank gene 23949 25925 . - . ID=gene-HMPREF2844_05570;Name=HMPREF2844_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05570 KV808222.1 Protein Homology CDS 23949 25925 . - 0 ID=cds-OFJ79502.1;Parent=gene-HMPREF2844_05570;Dbxref=NCBI_GP:OFJ79502.1;Name=OFJ79502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761736.1;locus_tag=HMPREF2844_05570;product=type VI secretion protein;protein_id=OFJ79502.1;transl_table=11 KV808222.1 Genbank gene 25922 26434 . - . ID=gene-HMPREF2844_05575;Name=HMPREF2844_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05575 KV808222.1 Protein Homology CDS 25922 26434 . - 0 ID=cds-OFJ79503.1;Parent=gene-HMPREF2844_05575;Dbxref=NCBI_GP:OFJ79503.1;Name=OFJ79503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761733.1;locus_tag=HMPREF2844_05575;product=type VI secretion protein;protein_id=OFJ79503.1;transl_table=11 KV808222.1 Genbank gene 26468 27283 . - . ID=gene-HMPREF2844_05580;Name=HMPREF2844_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05580 KV808222.1 Protein Homology CDS 26468 27283 . - 0 ID=cds-OFJ79504.1;Parent=gene-HMPREF2844_05580;Dbxref=NCBI_GP:OFJ79504.1;Name=OFJ79504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761732.1;locus_tag=HMPREF2844_05580;product=ImpE protein;protein_id=OFJ79504.1;transl_table=11 KV808222.1 Genbank gene 27443 27925 . - . ID=gene-HMPREF2844_05585;Name=HMPREF2844_05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05585 KV808222.1 Protein Homology CDS 27443 27925 . - 0 ID=cds-OFJ79505.1;Parent=gene-HMPREF2844_05585;Dbxref=NCBI_GP:OFJ79505.1;Name=OFJ79505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272939.1;locus_tag=HMPREF2844_05585;product=hypothetical protein;protein_id=OFJ79505.1;transl_table=11 KV808222.1 Genbank gene 28013 29512 . - . ID=gene-HMPREF2844_05590;Name=HMPREF2844_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05590 KV808222.1 Protein Homology CDS 28013 29512 . - 0 ID=cds-OFJ79506.1;Parent=gene-HMPREF2844_05590;Dbxref=NCBI_GP:OFJ79506.1;Name=OFJ79506.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272938.1;locus_tag=HMPREF2844_05590;product=EvpB family type VI secretion protein;protein_id=OFJ79506.1;transl_table=11 KV808222.1 Genbank gene 29546 30064 . - . ID=gene-HMPREF2844_05595;Name=HMPREF2844_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05595 KV808222.1 Protein Homology CDS 29546 30064 . - 0 ID=cds-OFJ79507.1;Parent=gene-HMPREF2844_05595;Dbxref=NCBI_GP:OFJ79507.1;Name=OFJ79507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743370.1;locus_tag=HMPREF2844_05595;product=hypothetical protein;protein_id=OFJ79507.1;transl_table=11 KV808222.1 Genbank gene 30133 31200 . - . ID=gene-HMPREF2844_05600;Name=HMPREF2844_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05600 KV808222.1 Protein Homology CDS 30133 31200 . - 0 ID=cds-OFJ79508.1;Parent=gene-HMPREF2844_05600;Dbxref=NCBI_GP:OFJ79508.1;Name=OFJ79508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764169.1;locus_tag=HMPREF2844_05600;product=type VI secretion protein;protein_id=OFJ79508.1;transl_table=11 KV808222.1 Genbank gene 31205 31756 . - . ID=gene-HMPREF2844_05605;Name=HMPREF2844_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05605 KV808222.1 Protein Homology CDS 31205 31756 . - 0 ID=cds-OFJ79509.1;Parent=gene-HMPREF2844_05605;Dbxref=NCBI_GP:OFJ79509.1;Name=OFJ79509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764194.1;locus_tag=HMPREF2844_05605;product=type VI secretion protein;protein_id=OFJ79509.1;transl_table=11 KV808222.1 Genbank gene 31842 32105 . + . ID=gene-HMPREF2844_05610;Name=HMPREF2844_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05610 KV808222.1 GeneMarkS+ CDS 31842 32105 . + 0 ID=cds-OFJ79510.1;Parent=gene-HMPREF2844_05610;Dbxref=NCBI_GP:OFJ79510.1;Name=OFJ79510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05610;product=hypothetical protein;protein_id=OFJ79510.1;transl_table=11 KV808222.1 Genbank pseudogene 32196 33309 . + . ID=gene-HMPREF2844_05615;Name=HMPREF2844_05615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05615;pseudo=true KV808222.1 GeneMarkS+ CDS 32196 33309 . + 0 ID=cds-HMPREF2844_05615;Parent=gene-HMPREF2844_05615;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05615;product=sugar-binding protein;pseudo=true;transl_table=11 ##sequence-region KV808223.1 1 15316 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808223.1 Genbank region 1 15316 . + . ID=KV808223.1:1..15316;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808223.1 Genbank gene 124 1668 . - . ID=gene-HMPREF2844_05620;Name=HMPREF2844_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05620 KV808223.1 Protein Homology CDS 124 1668 . - 0 ID=cds-OFJ79454.1;Parent=gene-HMPREF2844_05620;Dbxref=NCBI_GP:OFJ79454.1;Name=OFJ79454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272129.1;locus_tag=HMPREF2844_05620;product=L-aspartate oxidase;protein_id=OFJ79454.1;transl_table=11 KV808223.1 Genbank gene 1826 2938 . - . ID=gene-HMPREF2844_05625;Name=HMPREF2844_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05625 KV808223.1 Protein Homology CDS 1826 2938 . - 0 ID=cds-OFJ79455.1;Parent=gene-HMPREF2844_05625;Dbxref=NCBI_GP:OFJ79455.1;Name=OFJ79455.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687379.1;locus_tag=HMPREF2844_05625;product=quinolinate synthetase;protein_id=OFJ79455.1;transl_table=11 KV808223.1 Genbank gene 3140 4078 . + . ID=gene-HMPREF2844_05630;Name=HMPREF2844_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05630 KV808223.1 Protein Homology CDS 3140 4078 . + 0 ID=cds-OFJ79456.1;Parent=gene-HMPREF2844_05630;Dbxref=NCBI_GP:OFJ79456.1;Name=OFJ79456.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222013.1;locus_tag=HMPREF2844_05630;product=hypothetical protein;protein_id=OFJ79456.1;transl_table=11 KV808223.1 Genbank gene 4153 5034 . + . ID=gene-HMPREF2844_05635;Name=HMPREF2844_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05635 KV808223.1 Protein Homology CDS 4153 5034 . + 0 ID=cds-OFJ79457.1;Parent=gene-HMPREF2844_05635;Dbxref=NCBI_GP:OFJ79457.1;Name=OFJ79457.1;Note=catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686333.1;locus_tag=HMPREF2844_05635;product=nicotinate-nucleotide diphosphorylase (carboxylating);protein_id=OFJ79457.1;transl_table=11 KV808223.1 Genbank gene 5443 6144 . - . ID=gene-HMPREF2844_05640;Name=HMPREF2844_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05640 KV808223.1 Protein Homology CDS 5443 6144 . - 0 ID=cds-OFJ79458.1;Parent=gene-HMPREF2844_05640;Dbxref=NCBI_GP:OFJ79458.1;Name=OFJ79458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756572.1;locus_tag=HMPREF2844_05640;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=OFJ79458.1;transl_table=11 KV808223.1 Genbank gene 6146 6955 . - . ID=gene-HMPREF2844_05645;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=HMPREF2844_05645 KV808223.1 Protein Homology CDS 6146 6955 . - 0 ID=cds-OFJ79459.1;Parent=gene-HMPREF2844_05645;Dbxref=NCBI_GP:OFJ79459.1;Name=OFJ79459.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713944.1;locus_tag=HMPREF2844_05645;product=shikimate dehydrogenase;protein_id=OFJ79459.1;transl_table=11 KV808223.1 Genbank gene 7199 8617 . + . ID=gene-HMPREF2844_05650;Name=HMPREF2844_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05650 KV808223.1 Protein Homology CDS 7199 8617 . + 0 ID=cds-OFJ79460.1;Parent=gene-HMPREF2844_05650;Dbxref=NCBI_GP:OFJ79460.1;Name=OFJ79460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245865.1;locus_tag=HMPREF2844_05650;product=type I glutamate--ammonia ligase;protein_id=OFJ79460.1;transl_table=11 KV808223.1 Genbank gene 8874 9938 . + . ID=gene-HMPREF2844_05655;Name=HMPREF2844_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05655 KV808223.1 Protein Homology CDS 8874 9938 . + 0 ID=cds-OFJ79461.1;Parent=gene-HMPREF2844_05655;Dbxref=NCBI_GP:OFJ79461.1;Name=OFJ79461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273070.1;locus_tag=HMPREF2844_05655;product=butanediol dehydrogenase;protein_id=OFJ79461.1;transl_table=11 KV808223.1 Genbank gene 10145 12316 . - . ID=gene-HMPREF2844_05660;Name=HMPREF2844_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05660 KV808223.1 Protein Homology CDS 10145 12316 . - 0 ID=cds-OFJ79462.1;Parent=gene-HMPREF2844_05660;Dbxref=NCBI_GP:OFJ79462.1;Name=OFJ79462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520938.1;locus_tag=HMPREF2844_05660;product=outer membrane ferripyoverdine receptor;protein_id=OFJ79462.1;transl_table=11 KV808223.1 Genbank gene 12676 13314 . - . ID=gene-HMPREF2844_05665;Name=HMPREF2844_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05665 KV808223.1 Protein Homology CDS 12676 13314 . - 0 ID=cds-OFJ79463.1;Parent=gene-HMPREF2844_05665;Dbxref=NCBI_GP:OFJ79463.1;Name=OFJ79463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777273.1;locus_tag=HMPREF2844_05665;product=7-carboxy-7-deazaguanine synthase;protein_id=OFJ79463.1;transl_table=11 KV808223.1 Genbank gene 13311 13682 . - . ID=gene-HMPREF2844_05670;Name=HMPREF2844_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05670 KV808223.1 Protein Homology CDS 13311 13682 . - 0 ID=cds-OFJ79464.1;Parent=gene-HMPREF2844_05670;Dbxref=NCBI_GP:OFJ79464.1;Name=OFJ79464.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017629259.1;locus_tag=HMPREF2844_05670;product=hypothetical protein;protein_id=OFJ79464.1;transl_table=11 KV808223.1 Genbank gene 13806 14228 . - . ID=gene-HMPREF2844_05675;Name=HMPREF2844_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05675 KV808223.1 Protein Homology CDS 13806 14228 . - 0 ID=cds-OFJ79465.1;Parent=gene-HMPREF2844_05675;Dbxref=NCBI_GP:OFJ79465.1;Name=OFJ79465.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217869.1;locus_tag=HMPREF2844_05675;product=6-carboxy-5%2C6%2C7%2C8-tetrahydropterin synthase;protein_id=OFJ79465.1;transl_table=11 KV808223.1 Genbank gene 14239 14754 . - . ID=gene-HMPREF2844_05680;Name=HMPREF2844_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05680 KV808223.1 Protein Homology CDS 14239 14754 . - 0 ID=cds-OFJ79466.1;Parent=gene-HMPREF2844_05680;Dbxref=NCBI_GP:OFJ79466.1;Name=OFJ79466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273148.1;locus_tag=HMPREF2844_05680;product=hypothetical protein;protein_id=OFJ79466.1;transl_table=11 KV808223.1 Genbank pseudogene 14892 15316 . - . ID=gene-HMPREF2844_05685;Name=HMPREF2844_05685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05685;pseudo=true KV808223.1 Protein Homology CDS 14892 15316 . - 2 ID=cds-HMPREF2844_05685;Parent=gene-HMPREF2844_05685;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815312.1;locus_tag=HMPREF2844_05685;product=7-cyano-7-deazaguanine synthase;pseudo=true;transl_table=11 ##sequence-region KV808224.1 1 5253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808224.1 Genbank region 1 5253 . + . ID=KV808224.1:1..5253;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808224.1 Genbank gene 92 565 . - . ID=gene-HMPREF2844_05690;Name=HMPREF2844_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05690 KV808224.1 Protein Homology CDS 92 565 . - 0 ID=cds-OFJ79152.1;Parent=gene-HMPREF2844_05690;Dbxref=NCBI_GP:OFJ79152.1;Name=OFJ79152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283164.1;locus_tag=HMPREF2844_05690;product=exclusion suppressor FxsA;protein_id=OFJ79152.1;transl_table=11 KV808224.1 Genbank gene 835 911 . + . ID=gene-HMPREF2844_05695;Name=HMPREF2844_05695;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05695 KV808224.1 tRNAscan-SE tRNA 835 911 . + . ID=rna-HMPREF2844_05695;Parent=gene-HMPREF2844_05695;anticodon=(pos:869..871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05695;product=tRNA-Pro KV808224.1 tRNAscan-SE exon 835 911 . + . ID=exon-HMPREF2844_05695-1;Parent=rna-HMPREF2844_05695;anticodon=(pos:869..871);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05695;product=tRNA-Pro KV808224.1 Genbank gene 1198 2562 . + . ID=gene-HMPREF2844_05700;Name=HMPREF2844_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05700 KV808224.1 Protein Homology CDS 1198 2562 . + 0 ID=cds-OFJ79153.1;Parent=gene-HMPREF2844_05700;Dbxref=NCBI_GP:OFJ79153.1;Name=OFJ79153.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519747.1;locus_tag=HMPREF2844_05700;product=transporter;protein_id=OFJ79153.1;transl_table=11 KV808224.1 Genbank gene 2732 5179 . + . ID=gene-HMPREF2844_05705;Name=HMPREF2844_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05705 KV808224.1 Protein Homology CDS 2732 5179 . + 0 ID=cds-OFJ79154.1;Parent=gene-HMPREF2844_05705;Dbxref=NCBI_GP:OFJ79154.1;Name=OFJ79154.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270134.1;locus_tag=HMPREF2844_05705;product=cell division protein FtsK;protein_id=OFJ79154.1;transl_table=11 ##sequence-region KV808225.1 1 255 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808225.1 Genbank region 1 255 . + . ID=KV808225.1:1..255;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808225.1 Genbank pseudogene 1 255 . + . ID=gene-HMPREF2844_05710;Name=HMPREF2844_05710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05710;pseudo=true KV808225.1 GeneMarkS+ CDS 1 255 . + 2 ID=cds-HMPREF2844_05710;Parent=gene-HMPREF2844_05710;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05710;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808226.1 1 1340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808226.1 Genbank region 1 1340 . + . ID=KV808226.1:1..1340;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808226.1 Genbank pseudogene 1 187 . + . ID=gene-HMPREF2844_05715;Name=HMPREF2844_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05715;pseudo=true KV808226.1 GeneMarkS+ CDS 1 187 . + 1 ID=cds-HMPREF2844_05715;Parent=gene-HMPREF2844_05715;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05715;product=hypothetical protein;pseudo=true;transl_table=11 KV808226.1 Genbank gene 184 1278 . + . ID=gene-HMPREF2844_05720;Name=HMPREF2844_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05720 KV808226.1 Protein Homology CDS 184 1278 . + 0 ID=cds-OFJ79134.1;Parent=gene-HMPREF2844_05720;Dbxref=NCBI_GP:OFJ79134.1;Name=OFJ79134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687106.1;locus_tag=HMPREF2844_05720;product=iron ABC transporter substrate-binding protein;protein_id=OFJ79134.1;transl_table=11 ##sequence-region KV808227.1 1 15956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808227.1 Genbank region 1 15956 . + . ID=KV808227.1:1..15956;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808227.1 Genbank gene 137 592 . - . ID=gene-HMPREF2844_05725;Name=HMPREF2844_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05725 KV808227.1 Protein Homology CDS 137 592 . - 0 ID=cds-OFJ79086.1;Parent=gene-HMPREF2844_05725;Dbxref=NCBI_GP:OFJ79086.1;Name=OFJ79086.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270005.1;locus_tag=HMPREF2844_05725;product=hypothetical protein;protein_id=OFJ79086.1;transl_table=11 KV808227.1 Genbank gene 694 924 . + . ID=gene-HMPREF2844_05730;Name=HMPREF2844_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05730 KV808227.1 Protein Homology CDS 694 924 . + 0 ID=cds-OFJ79087.1;Parent=gene-HMPREF2844_05730;Dbxref=NCBI_GP:OFJ79087.1;Name=OFJ79087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684121.1;locus_tag=HMPREF2844_05730;product=transcriptional regulator;protein_id=OFJ79087.1;transl_table=11 KV808227.1 Genbank gene 1207 1283 . - . ID=gene-HMPREF2844_05735;Name=HMPREF2844_05735;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05735 KV808227.1 tRNAscan-SE tRNA 1207 1283 . - . ID=rna-HMPREF2844_05735;Parent=gene-HMPREF2844_05735;anticodon=(pos:complement(1247..1249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05735;product=tRNA-Met KV808227.1 tRNAscan-SE exon 1207 1283 . - . ID=exon-HMPREF2844_05735-1;Parent=rna-HMPREF2844_05735;anticodon=(pos:complement(1247..1249));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05735;product=tRNA-Met KV808227.1 Genbank gene 1421 1891 . - . ID=gene-HMPREF2844_05740;Name=HMPREF2844_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05740 KV808227.1 Protein Homology CDS 1421 1891 . - 0 ID=cds-OFJ79088.1;Parent=gene-HMPREF2844_05740;Dbxref=NCBI_GP:OFJ79088.1;Name=OFJ79088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KWA0.1;locus_tag=HMPREF2844_05740;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=OFJ79088.1;transl_table=11 KV808227.1 Genbank gene 2087 2473 . - . ID=gene-HMPREF2844_05745;Name=HMPREF2844_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05745 KV808227.1 Protein Homology CDS 2087 2473 . - 0 ID=cds-OFJ79089.1;Parent=gene-HMPREF2844_05745;Dbxref=NCBI_GP:OFJ79089.1;Name=OFJ79089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214954.1;locus_tag=HMPREF2844_05745;product=ribosome silencing factor RsfS;protein_id=OFJ79089.1;transl_table=11 KV808227.1 Genbank gene 2541 3152 . - . ID=gene-HMPREF2844_05750;Name=HMPREF2844_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05750 KV808227.1 Protein Homology CDS 2541 3152 . - 0 ID=cds-OFJ79090.1;Parent=gene-HMPREF2844_05750;Dbxref=NCBI_GP:OFJ79090.1;Name=OFJ79090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743643.1;locus_tag=HMPREF2844_05750;product=nicotinate-nicotinamide nucleotide adenylyltransferase;protein_id=OFJ79090.1;transl_table=11 KV808227.1 Genbank gene 3208 3804 . - . ID=gene-HMPREF2844_05755;Name=HMPREF2844_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05755 KV808227.1 Protein Homology CDS 3208 3804 . - 0 ID=cds-OFJ79091.1;Parent=gene-HMPREF2844_05755;Dbxref=NCBI_GP:OFJ79091.1;Name=OFJ79091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312474.1;locus_tag=HMPREF2844_05755;product=carbonic anhydrase;protein_id=OFJ79091.1;transl_table=11 KV808227.1 Genbank gene 3960 4838 . + . ID=gene-HMPREF2844_05760;Name=HMPREF2844_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05760 KV808227.1 Protein Homology CDS 3960 4838 . + 0 ID=cds-OFJ79092.1;Parent=gene-HMPREF2844_05760;Dbxref=NCBI_GP:OFJ79092.1;Name=OFJ79092.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270001.1;locus_tag=HMPREF2844_05760;product=NUDIX hydrolase;protein_id=OFJ79092.1;transl_table=11 KV808227.1 Genbank gene 4964 5902 . + . ID=gene-HMPREF2844_05765;Name=HMPREF2844_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05765 KV808227.1 Protein Homology CDS 4964 5902 . + 0 ID=cds-OFJ79093.1;Parent=gene-HMPREF2844_05765;Dbxref=NCBI_GP:OFJ79093.1;Name=OFJ79093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743638.1;locus_tag=HMPREF2844_05765;product=ABC transporter ATP-binding protein;protein_id=OFJ79093.1;transl_table=11 KV808227.1 Genbank gene 7467 8978 . + . ID=gene-HMPREF2844_05770;Name=HMPREF2844_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05770 KV808227.1 Protein Homology CDS 7467 8978 . + 0 ID=cds-OFJ79095.1;Parent=gene-HMPREF2844_05770;Dbxref=NCBI_GP:OFJ79095.1;Name=OFJ79095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763275.1;locus_tag=HMPREF2844_05770;product=recombinase RmuC;protein_id=OFJ79095.1;transl_table=11 KV808227.1 Genbank gene 9518 10354 . + . ID=gene-HMPREF2844_05775;Name=HMPREF2844_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05775 KV808227.1 Protein Homology CDS 9518 10354 . + 0 ID=cds-OFJ79094.1;Parent=gene-HMPREF2844_05775;Dbxref=NCBI_GP:OFJ79094.1;Name=OFJ79094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216212.1;locus_tag=HMPREF2844_05775;product=GNAT family N-acetyltransferase;protein_id=OFJ79094.1;transl_table=11 KV808227.1 Genbank gene 10988 12844 . + . ID=gene-HMPREF2844_05780;Name=HMPREF2844_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05780 KV808227.1 Protein Homology CDS 10988 12844 . + 0 ID=cds-OFJ79069.1;Parent=gene-HMPREF2844_05780;Dbxref=NCBI_GP:OFJ79069.1;Name=OFJ79069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681656.1;locus_tag=HMPREF2844_05780;product=multidrug ABC transporter ATP-binding protein;protein_id=OFJ79069.1;transl_table=11 KV808227.1 Genbank gene 13138 14436 . + . ID=gene-HMPREF2844_05785;Name=HMPREF2844_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05785 KV808227.1 Protein Homology CDS 13138 14436 . + 0 ID=cds-OFJ79070.1;Parent=gene-HMPREF2844_05785;Dbxref=NCBI_GP:OFJ79070.1;Name=OFJ79070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686652.1;locus_tag=HMPREF2844_05785;product=peptidase M16;protein_id=OFJ79070.1;transl_table=11 KV808227.1 Genbank gene 14502 14753 . + . ID=gene-HMPREF2844_05790;Name=HMPREF2844_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05790 KV808227.1 Protein Homology CDS 14502 14753 . + 0 ID=cds-OFJ79071.1;Parent=gene-HMPREF2844_05790;Dbxref=NCBI_GP:OFJ79071.1;Name=OFJ79071.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269993.1;locus_tag=HMPREF2844_05790;product=hypothetical protein;protein_id=OFJ79071.1;transl_table=11 KV808227.1 Genbank gene 14781 15956 . - . ID=gene-HMPREF2844_05795;Name=HMPREF2844_05795;end_range=15956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05795;partial=true KV808227.1 Protein Homology CDS 14781 15956 . - 0 ID=cds-OFJ79072.1;Parent=gene-HMPREF2844_05795;Dbxref=NCBI_GP:OFJ79072.1;Name=OFJ79072.1;end_range=15956,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743614.1;locus_tag=HMPREF2844_05795;partial=true;product=glutamate--tRNA ligase;protein_id=OFJ79072.1;transl_table=11 ##sequence-region KV808228.1 1 50395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808228.1 Genbank region 1 50395 . + . ID=KV808228.1:1..50395;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808228.1 Genbank gene 348 438 . - . ID=gene-HMPREF2844_05800;Name=HMPREF2844_05800;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05800 KV808228.1 tRNAscan-SE tRNA 348 438 . - . ID=rna-HMPREF2844_05800;Parent=gene-HMPREF2844_05800;anticodon=(pos:complement(402..404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05800;product=tRNA-Ser KV808228.1 tRNAscan-SE exon 348 438 . - . ID=exon-HMPREF2844_05800-1;Parent=rna-HMPREF2844_05800;anticodon=(pos:complement(402..404));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05800;product=tRNA-Ser KV808228.1 Genbank gene 519 1298 . - . ID=gene-HMPREF2844_05805;Name=HMPREF2844_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05805 KV808228.1 Protein Homology CDS 519 1298 . - 0 ID=cds-OFJ79059.1;Parent=gene-HMPREF2844_05805;Dbxref=NCBI_GP:OFJ79059.1;Name=OFJ79059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272575.1;locus_tag=HMPREF2844_05805;product=hypothetical protein;protein_id=OFJ79059.1;transl_table=11 KV808228.1 Genbank gene 1461 3473 . - . ID=gene-HMPREF2844_05810;Name=HMPREF2844_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05810 KV808228.1 Protein Homology CDS 1461 3473 . - 0 ID=cds-OFJ79060.1;Parent=gene-HMPREF2844_05810;Dbxref=NCBI_GP:OFJ79060.1;Name=OFJ79060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270164.1;locus_tag=HMPREF2844_05810;product=phosphoglycerol transferase;protein_id=OFJ79060.1;transl_table=11 KV808228.1 Genbank gene 3764 5743 . - . ID=gene-HMPREF2844_05815;Name=HMPREF2844_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05815 KV808228.1 Protein Homology CDS 3764 5743 . - 0 ID=cds-OFJ79061.1;Parent=gene-HMPREF2844_05815;Dbxref=NCBI_GP:OFJ79061.1;Name=OFJ79061.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212980.1;locus_tag=HMPREF2844_05815;product=transketolase;protein_id=OFJ79061.1;transl_table=11 KV808228.1 Genbank gene 6193 7677 . + . ID=gene-HMPREF2844_05820;Name=HMPREF2844_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05820 KV808228.1 Protein Homology CDS 6193 7677 . + 0 ID=cds-OFJ79062.1;Parent=gene-HMPREF2844_05820;Dbxref=NCBI_GP:OFJ79062.1;Name=OFJ79062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003708970.1;locus_tag=HMPREF2844_05820;product=cytochrome c oxidase accessory protein CcoG;protein_id=OFJ79062.1;transl_table=11 KV808228.1 Genbank gene 7681 8250 . + . ID=gene-HMPREF2844_05825;Name=HMPREF2844_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05825 KV808228.1 Protein Homology CDS 7681 8250 . + 0 ID=cds-OFJ79063.1;Parent=gene-HMPREF2844_05825;Dbxref=NCBI_GP:OFJ79063.1;Name=OFJ79063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744335.1;locus_tag=HMPREF2844_05825;product=hypothetical protein;protein_id=OFJ79063.1;transl_table=11 KV808228.1 Genbank gene 8551 9096 . + . ID=gene-HMPREF2844_05830;Name=HMPREF2844_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05830 KV808228.1 Protein Homology CDS 8551 9096 . + 0 ID=cds-OFJ79064.1;Parent=gene-HMPREF2844_05830;Dbxref=NCBI_GP:OFJ79064.1;Name=OFJ79064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270168.1;locus_tag=HMPREF2844_05830;product=type IV secretion protein Rhs;protein_id=OFJ79064.1;transl_table=11 KV808228.1 Genbank gene 9198 9758 . + . ID=gene-HMPREF2844_05835;Name=HMPREF2844_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05835 KV808228.1 Protein Homology CDS 9198 9758 . + 0 ID=cds-OFJ79065.1;Parent=gene-HMPREF2844_05835;Dbxref=NCBI_GP:OFJ79065.1;Name=OFJ79065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270169.1;locus_tag=HMPREF2844_05835;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=OFJ79065.1;transl_table=11 KV808228.1 Genbank gene 9844 9919 . + . ID=gene-HMPREF2844_05840;Name=HMPREF2844_05840;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05840 KV808228.1 tRNAscan-SE tRNA 9844 9919 . + . ID=rna-HMPREF2844_05840;Parent=gene-HMPREF2844_05840;anticodon=(pos:9877..9879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05840;product=tRNA-Gly KV808228.1 tRNAscan-SE exon 9844 9919 . + . ID=exon-HMPREF2844_05840-1;Parent=rna-HMPREF2844_05840;anticodon=(pos:9877..9879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05840;product=tRNA-Gly KV808228.1 Genbank gene 10139 10212 . + . ID=gene-HMPREF2844_05845;Name=HMPREF2844_05845;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05845 KV808228.1 tRNAscan-SE tRNA 10139 10212 . + . ID=rna-HMPREF2844_05845;Parent=gene-HMPREF2844_05845;anticodon=(pos:10171..10173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05845;product=tRNA-Cys KV808228.1 tRNAscan-SE exon 10139 10212 . + . ID=exon-HMPREF2844_05845-1;Parent=rna-HMPREF2844_05845;anticodon=(pos:10171..10173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05845;product=tRNA-Cys KV808228.1 Genbank gene 10324 10413 . + . ID=gene-HMPREF2844_05850;Name=HMPREF2844_05850;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_05850 KV808228.1 tRNAscan-SE tRNA 10324 10413 . + . ID=rna-HMPREF2844_05850;Parent=gene-HMPREF2844_05850;anticodon=(pos:10358..10360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05850;product=tRNA-Leu KV808228.1 tRNAscan-SE exon 10324 10413 . + . ID=exon-HMPREF2844_05850-1;Parent=rna-HMPREF2844_05850;anticodon=(pos:10358..10360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_05850;product=tRNA-Leu KV808228.1 Genbank pseudogene 10612 11574 . + . ID=gene-HMPREF2844_05855;Name=HMPREF2844_05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05855;pseudo=true KV808228.1 Protein Homology CDS 10612 11574 . + 0 ID=cds-HMPREF2844_05855;Parent=gene-HMPREF2844_05855;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742945.1;locus_tag=HMPREF2844_05855;product=integrase;pseudo=true;transl_table=11 KV808228.1 Genbank gene 11707 12834 . - . ID=gene-HMPREF2844_05860;Name=HMPREF2844_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05860 KV808228.1 Protein Homology CDS 11707 12834 . - 0 ID=cds-OFJ79014.1;Parent=gene-HMPREF2844_05860;Dbxref=NCBI_GP:OFJ79014.1;Name=OFJ79014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742946.1;locus_tag=HMPREF2844_05860;product=type IV pili twitching motility protein PilT;protein_id=OFJ79014.1;transl_table=11 KV808228.1 Genbank gene 13022 13723 . + . ID=gene-HMPREF2844_05865;Name=HMPREF2844_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05865 KV808228.1 Protein Homology CDS 13022 13723 . + 0 ID=cds-OFJ79015.1;Parent=gene-HMPREF2844_05865;Dbxref=NCBI_GP:OFJ79015.1;Name=OFJ79015.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357299.1;locus_tag=HMPREF2844_05865;product=5'-methylthioadenosine nucleosidase;protein_id=OFJ79015.1;transl_table=11 KV808228.1 Genbank gene 13865 15658 . + . ID=gene-HMPREF2844_05870;Name=HMPREF2844_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05870 KV808228.1 Protein Homology CDS 13865 15658 . + 0 ID=cds-OFJ79016.1;Parent=gene-HMPREF2844_05870;Dbxref=NCBI_GP:OFJ79016.1;Name=OFJ79016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575259.1;locus_tag=HMPREF2844_05870;product=elongation factor 4;protein_id=OFJ79016.1;transl_table=11 KV808228.1 Genbank gene 15658 16677 . + . ID=gene-HMPREF2844_05875;Name=HMPREF2844_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05875 KV808228.1 Protein Homology CDS 15658 16677 . + 0 ID=cds-OFJ79017.1;Parent=gene-HMPREF2844_05875;Dbxref=NCBI_GP:OFJ79017.1;Name=OFJ79017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742950.1;locus_tag=HMPREF2844_05875;product=S26 family signal peptidase;protein_id=OFJ79017.1;transl_table=11 KV808228.1 Genbank gene 16990 17874 . + . ID=gene-HMPREF2844_05880;Name=HMPREF2844_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05880 KV808228.1 Protein Homology CDS 16990 17874 . + 0 ID=cds-OFJ79018.1;Parent=gene-HMPREF2844_05880;Dbxref=NCBI_GP:OFJ79018.1;Name=OFJ79018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742952.1;locus_tag=HMPREF2844_05880;product=hypothetical protein;protein_id=OFJ79018.1;transl_table=11 KV808228.1 Genbank gene 18198 19175 . + . ID=gene-HMPREF2844_05885;Name=HMPREF2844_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05885 KV808228.1 Protein Homology CDS 18198 19175 . + 0 ID=cds-OFJ79019.1;Parent=gene-HMPREF2844_05885;Dbxref=NCBI_GP:OFJ79019.1;Name=OFJ79019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686208.1;locus_tag=HMPREF2844_05885;product=hypothetical protein;protein_id=OFJ79019.1;transl_table=11 KV808228.1 Genbank gene 19363 20514 . + . ID=gene-HMPREF2844_05890;Name=HMPREF2844_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05890 KV808228.1 GeneMarkS+ CDS 19363 20514 . + 0 ID=cds-OFJ79020.1;Parent=gene-HMPREF2844_05890;Dbxref=NCBI_GP:OFJ79020.1;Name=OFJ79020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_05890;product=hypothetical protein;protein_id=OFJ79020.1;transl_table=11 KV808228.1 Genbank gene 20691 21488 . + . ID=gene-HMPREF2844_05895;Name=HMPREF2844_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05895 KV808228.1 Protein Homology CDS 20691 21488 . + 0 ID=cds-OFJ79021.1;Parent=gene-HMPREF2844_05895;Dbxref=NCBI_GP:OFJ79021.1;Name=OFJ79021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776012.1;locus_tag=HMPREF2844_05895;product=ABC transporter permease;protein_id=OFJ79021.1;transl_table=11 KV808228.1 Genbank gene 21485 22180 . + . ID=gene-HMPREF2844_05900;Name=HMPREF2844_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05900 KV808228.1 Protein Homology CDS 21485 22180 . + 0 ID=cds-OFJ79022.1;Parent=gene-HMPREF2844_05900;Dbxref=NCBI_GP:OFJ79022.1;Name=OFJ79022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751811.1;locus_tag=HMPREF2844_05900;product=ABC transporter ATP-binding protein;protein_id=OFJ79022.1;transl_table=11 KV808228.1 Genbank gene 22491 23105 . + . ID=gene-HMPREF2844_05905;Name=HMPREF2844_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05905 KV808228.1 Protein Homology CDS 22491 23105 . + 0 ID=cds-OFJ79023.1;Parent=gene-HMPREF2844_05905;Dbxref=NCBI_GP:OFJ79023.1;Name=OFJ79023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678684.1;locus_tag=HMPREF2844_05905;product=cadmium transporter;protein_id=OFJ79023.1;transl_table=11 KV808228.1 Genbank gene 23401 24498 . + . ID=gene-HMPREF2844_05910;Name=HMPREF2844_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05910 KV808228.1 Protein Homology CDS 23401 24498 . + 0 ID=cds-OFJ79024.1;Parent=gene-HMPREF2844_05910;Dbxref=NCBI_GP:OFJ79024.1;Name=OFJ79024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675858.1;locus_tag=HMPREF2844_05910;product=hypothetical protein;protein_id=OFJ79024.1;transl_table=11 KV808228.1 Genbank gene 24612 25049 . - . ID=gene-HMPREF2844_05915;Name=HMPREF2844_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05915 KV808228.1 Protein Homology CDS 24612 25049 . - 0 ID=cds-OFJ79025.1;Parent=gene-HMPREF2844_05915;Dbxref=NCBI_GP:OFJ79025.1;Name=OFJ79025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230436.1;locus_tag=HMPREF2844_05915;product=acyl-CoA thioesterase;protein_id=OFJ79025.1;transl_table=11 KV808228.1 Genbank gene 25154 25927 . - . ID=gene-HMPREF2844_05920;Name=HMPREF2844_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05920 KV808228.1 Protein Homology CDS 25154 25927 . - 0 ID=cds-OFJ79026.1;Parent=gene-HMPREF2844_05920;Dbxref=NCBI_GP:OFJ79026.1;Name=OFJ79026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687059.1;locus_tag=HMPREF2844_05920;product=laccase;protein_id=OFJ79026.1;transl_table=11 KV808228.1 Genbank gene 26051 26599 . - . ID=gene-HMPREF2844_05925;Name=HMPREF2844_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05925 KV808228.1 Protein Homology CDS 26051 26599 . - 0 ID=cds-OFJ79027.1;Parent=gene-HMPREF2844_05925;Dbxref=NCBI_GP:OFJ79027.1;Name=OFJ79027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779327.1;locus_tag=HMPREF2844_05925;product=hypothetical protein;protein_id=OFJ79027.1;transl_table=11 KV808228.1 Genbank gene 26634 27758 . - . ID=gene-HMPREF2844_05930;Name=HMPREF2844_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05930 KV808228.1 Protein Homology CDS 26634 27758 . - 0 ID=cds-OFJ79028.1;Parent=gene-HMPREF2844_05930;Dbxref=NCBI_GP:OFJ79028.1;Name=OFJ79028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258136.1;locus_tag=HMPREF2844_05930;product=RNA pseudouridine synthase;protein_id=OFJ79028.1;transl_table=11 KV808228.1 Genbank gene 27757 28563 . + . ID=gene-HMPREF2844_05935;Name=HMPREF2844_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05935 KV808228.1 Protein Homology CDS 27757 28563 . + 0 ID=cds-OFJ79029.1;Parent=gene-HMPREF2844_05935;Dbxref=NCBI_GP:OFJ79029.1;Name=OFJ79029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343543.1;locus_tag=HMPREF2844_05935;product=competence protein ComL;protein_id=OFJ79029.1;transl_table=11 KV808228.1 Genbank gene 28674 30200 . - . ID=gene-HMPREF2844_05940;Name=HMPREF2844_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05940 KV808228.1 Protein Homology CDS 28674 30200 . - 0 ID=cds-OFJ79030.1;Parent=gene-HMPREF2844_05940;Dbxref=NCBI_GP:OFJ79030.1;Name=OFJ79030.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002252306.1;locus_tag=HMPREF2844_05940;product=PLP-dependent threonine dehydratase;protein_id=OFJ79030.1;transl_table=11 KV808228.1 Genbank gene 30416 31669 . + . ID=gene-HMPREF2844_05945;Name=HMPREF2844_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05945 KV808228.1 Protein Homology CDS 30416 31669 . + 0 ID=cds-OFJ79031.1;Parent=gene-HMPREF2844_05945;Dbxref=NCBI_GP:OFJ79031.1;Name=OFJ79031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742978.1;locus_tag=HMPREF2844_05945;product=peptidase;protein_id=OFJ79031.1;transl_table=11 KV808228.1 Genbank gene 31755 32417 . + . ID=gene-HMPREF2844_05950;Name=HMPREF2844_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05950 KV808228.1 Protein Homology CDS 31755 32417 . + 0 ID=cds-OFJ79032.1;Parent=gene-HMPREF2844_05950;Dbxref=NCBI_GP:OFJ79032.1;Name=OFJ79032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687064.1;locus_tag=HMPREF2844_05950;product=hypothetical protein;protein_id=OFJ79032.1;transl_table=11 KV808228.1 Genbank gene 32490 32978 . - . ID=gene-HMPREF2844_05955;Name=HMPREF2844_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05955 KV808228.1 Protein Homology CDS 32490 32978 . - 0 ID=cds-OFJ79033.1;Parent=gene-HMPREF2844_05955;Dbxref=NCBI_GP:OFJ79033.1;Name=OFJ79033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746916.1;locus_tag=HMPREF2844_05955;product=hypothetical protein;protein_id=OFJ79033.1;transl_table=11 KV808228.1 Genbank gene 33349 34308 . - . ID=gene-HMPREF2844_05960;Name=HMPREF2844_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05960 KV808228.1 Protein Homology CDS 33349 34308 . - 0 ID=cds-OFJ78998.1;Parent=gene-HMPREF2844_05960;Dbxref=NCBI_GP:OFJ78998.1;Name=OFJ78998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239108.1;locus_tag=HMPREF2844_05960;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=OFJ78998.1;transl_table=11 KV808228.1 Genbank gene 34454 36616 . - . ID=gene-HMPREF2844_05965;Name=HMPREF2844_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05965 KV808228.1 Protein Homology CDS 34454 36616 . - 0 ID=cds-OFJ78999.1;Parent=gene-HMPREF2844_05965;Dbxref=NCBI_GP:OFJ78999.1;Name=OFJ78999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822391.1;locus_tag=HMPREF2844_05965;product=copper-transporting ATPase;protein_id=OFJ78999.1;transl_table=11 KV808228.1 Genbank gene 36716 36925 . - . ID=gene-HMPREF2844_05970;Name=HMPREF2844_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05970 KV808228.1 Protein Homology CDS 36716 36925 . - 0 ID=cds-OFJ79000.1;Parent=gene-HMPREF2844_05970;Dbxref=NCBI_GP:OFJ79000.1;Name=OFJ79000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674677.1;locus_tag=HMPREF2844_05970;product=hypothetical protein;protein_id=OFJ79000.1;transl_table=11 KV808228.1 Genbank gene 37073 37465 . + . ID=gene-HMPREF2844_05975;Name=HMPREF2844_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05975 KV808228.1 Protein Homology CDS 37073 37465 . + 0 ID=cds-OFJ79001.1;Parent=gene-HMPREF2844_05975;Dbxref=NCBI_GP:OFJ79001.1;Name=OFJ79001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687068.1;locus_tag=HMPREF2844_05975;product=Cu(I)-responsive transcriptional regulator;protein_id=OFJ79001.1;transl_table=11 KV808228.1 Genbank gene 37745 38074 . + . ID=gene-HMPREF2844_05980;Name=HMPREF2844_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05980 KV808228.1 Protein Homology CDS 37745 38074 . + 0 ID=cds-OFJ79002.1;Parent=gene-HMPREF2844_05980;Dbxref=NCBI_GP:OFJ79002.1;Name=OFJ79002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687069.1;locus_tag=HMPREF2844_05980;product=osmotically inducible protein OsmC;protein_id=OFJ79002.1;transl_table=11 KV808228.1 Genbank gene 38166 38501 . + . ID=gene-HMPREF2844_05985;Name=HMPREF2844_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05985 KV808228.1 Protein Homology CDS 38166 38501 . + 0 ID=cds-OFJ79003.1;Parent=gene-HMPREF2844_05985;Dbxref=NCBI_GP:OFJ79003.1;Name=OFJ79003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677584.1;locus_tag=HMPREF2844_05985;product=thiol reductase thioredoxin;protein_id=OFJ79003.1;transl_table=11 KV808228.1 Genbank pseudogene 38506 39534 . + . ID=gene-HMPREF2844_05990;Name=HMPREF2844_05990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_05990;pseudo=true KV808228.1 Protein Homology CDS 38506 39534 . + 0 ID=cds-HMPREF2844_05990;Parent=gene-HMPREF2844_05990;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823190.1;locus_tag=HMPREF2844_05990;product=NADH oxidase;pseudo=true;transl_table=11 KV808228.1 Genbank gene 39798 40583 . + . ID=gene-HMPREF2844_05995;Name=HMPREF2844_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_05995 KV808228.1 Protein Homology CDS 39798 40583 . + 0 ID=cds-OFJ79004.1;Parent=gene-HMPREF2844_05995;Dbxref=NCBI_GP:OFJ79004.1;Name=OFJ79004.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746768.1;locus_tag=HMPREF2844_05995;product=dioxygenase;protein_id=OFJ79004.1;transl_table=11 KV808228.1 Genbank gene 40833 41768 . - . ID=gene-HMPREF2844_06000;Name=HMPREF2844_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06000 KV808228.1 Protein Homology CDS 40833 41768 . - 0 ID=cds-OFJ79005.1;Parent=gene-HMPREF2844_06000;Dbxref=NCBI_GP:OFJ79005.1;Name=OFJ79005.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B subclass 1A is a dimer formed by two identical PyrD subunits each containing an FMN group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778562.1;locus_tag=HMPREF2844_06000;product=dihydroorotate dehydrogenase;protein_id=OFJ79005.1;transl_table=11 KV808228.1 Genbank gene 42022 43203 . - . ID=gene-HMPREF2844_06005;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=HMPREF2844_06005 KV808228.1 Protein Homology CDS 42022 43203 . - 0 ID=cds-OFJ79006.1;Parent=gene-HMPREF2844_06005;Dbxref=NCBI_GP:OFJ79006.1;Name=OFJ79006.1;Note=DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate;gbkey=CDS;gene=argD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284636.1;locus_tag=HMPREF2844_06005;product=acetylornithine aminotransferase;protein_id=OFJ79006.1;transl_table=11 KV808228.1 Genbank gene 43349 43687 . + . ID=gene-HMPREF2844_06010;Name=HMPREF2844_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06010 KV808228.1 Protein Homology CDS 43349 43687 . + 0 ID=cds-OFJ79007.1;Parent=gene-HMPREF2844_06010;Dbxref=NCBI_GP:OFJ79007.1;Name=OFJ79007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270192.1;locus_tag=HMPREF2844_06010;product=general secretion pathway protein GspG;protein_id=OFJ79007.1;transl_table=11 KV808228.1 Genbank pseudogene 43684 44002 . + . ID=gene-HMPREF2844_06015;Name=HMPREF2844_06015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06015;pseudo=true KV808228.1 Protein Homology CDS 43684 44002 . + 0 ID=cds-HMPREF2844_06015;Parent=gene-HMPREF2844_06015;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687082.1;locus_tag=HMPREF2844_06015;product=hypothetical protein;pseudo=true;transl_table=11 KV808228.1 Genbank gene 44112 44912 . - . ID=gene-HMPREF2844_06020;Name=HMPREF2844_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06020 KV808228.1 Protein Homology CDS 44112 44912 . - 0 ID=cds-OFJ79008.1;Parent=gene-HMPREF2844_06020;Dbxref=NCBI_GP:OFJ79008.1;Name=OFJ79008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777701.1;locus_tag=HMPREF2844_06020;product=phosphatidylserine decarboxylase;protein_id=OFJ79008.1;transl_table=11 KV808228.1 Genbank gene 45132 48008 . + . ID=gene-HMPREF2844_06025;Name=HMPREF2844_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06025 KV808228.1 Protein Homology CDS 45132 48008 . + 0 ID=cds-OFJ79009.1;Parent=gene-HMPREF2844_06025;Dbxref=NCBI_GP:OFJ79009.1;Name=OFJ79009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761193.1;locus_tag=HMPREF2844_06025;product=ABC-ATPase UvrA;protein_id=OFJ79009.1;transl_table=11 KV808228.1 Genbank gene 48042 49340 . + . ID=gene-HMPREF2844_06030;Name=HMPREF2844_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06030 KV808228.1 GeneMarkS+ CDS 48042 49340 . + 0 ID=cds-OFJ79010.1;Parent=gene-HMPREF2844_06030;Dbxref=NCBI_GP:OFJ79010.1;Name=OFJ79010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06030;product=hypothetical protein;protein_id=OFJ79010.1;transl_table=11 KV808228.1 Genbank gene 49342 50262 . + . ID=gene-HMPREF2844_06035;Name=HMPREF2844_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06035 KV808228.1 GeneMarkS+ CDS 49342 50262 . + 0 ID=cds-OFJ79011.1;Parent=gene-HMPREF2844_06035;Dbxref=NCBI_GP:OFJ79011.1;Name=OFJ79011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06035;product=hypothetical protein;protein_id=OFJ79011.1;transl_table=11 ##sequence-region KV808229.1 1 23005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808229.1 Genbank region 1 23005 . + . ID=KV808229.1:1..23005;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808229.1 Genbank gene 139 324 . + . ID=gene-HMPREF2844_06040;Name=HMPREF2844_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06040 KV808229.1 Protein Homology CDS 139 324 . + 0 ID=cds-OFJ78981.1;Parent=gene-HMPREF2844_06040;Dbxref=NCBI_GP:OFJ78981.1;Name=OFJ78981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002230667.1;locus_tag=HMPREF2844_06040;product=hypothetical protein;protein_id=OFJ78981.1;transl_table=11 KV808229.1 Genbank gene 335 1003 . + . ID=gene-HMPREF2844_06045;Name=HMPREF2844_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06045 KV808229.1 Protein Homology CDS 335 1003 . + 0 ID=cds-OFJ78982.1;Parent=gene-HMPREF2844_06045;Dbxref=NCBI_GP:OFJ78982.1;Name=OFJ78982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002213029.1;locus_tag=HMPREF2844_06045;product=methyltransferase;protein_id=OFJ78982.1;transl_table=11 KV808229.1 Genbank gene 1008 1742 . + . ID=gene-HMPREF2844_06050;Name=HMPREF2844_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06050 KV808229.1 Protein Homology CDS 1008 1742 . + 0 ID=cds-OFJ78983.1;Parent=gene-HMPREF2844_06050;Dbxref=NCBI_GP:OFJ78983.1;Name=OFJ78983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686295.1;locus_tag=HMPREF2844_06050;product=hypothetical protein;protein_id=OFJ78983.1;transl_table=11 KV808229.1 Genbank gene 1821 2306 . + . ID=gene-HMPREF2844_06055;Name=HMPREF2844_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06055 KV808229.1 Protein Homology CDS 1821 2306 . + 0 ID=cds-OFJ78984.1;Parent=gene-HMPREF2844_06055;Dbxref=NCBI_GP:OFJ78984.1;Name=OFJ78984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746536.1;locus_tag=HMPREF2844_06055;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=OFJ78984.1;transl_table=11 KV808229.1 Genbank gene 2426 4333 . + . ID=gene-HMPREF2844_06060;Name=HMPREF2844_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06060 KV808229.1 Protein Homology CDS 2426 4333 . + 0 ID=cds-OFJ78985.1;Parent=gene-HMPREF2844_06060;Dbxref=NCBI_GP:OFJ78985.1;Name=OFJ78985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581094.1;locus_tag=HMPREF2844_06060;product=ABC transporter ATP-binding protein;protein_id=OFJ78985.1;transl_table=11 KV808229.1 Genbank gene 4405 5868 . - . ID=gene-HMPREF2844_06065;Name=HMPREF2844_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06065 KV808229.1 Protein Homology CDS 4405 5868 . - 0 ID=cds-OFJ78986.1;Parent=gene-HMPREF2844_06065;Dbxref=NCBI_GP:OFJ78986.1;Name=OFJ78986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767939.1;locus_tag=HMPREF2844_06065;product=IMP dehydrogenase;protein_id=OFJ78986.1;transl_table=11 KV808229.1 Genbank gene 6633 7919 . + . ID=gene-HMPREF2844_06070;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF2844_06070 KV808229.1 Protein Homology CDS 6633 7919 . + 0 ID=cds-OFJ78987.1;Parent=gene-HMPREF2844_06070;Dbxref=NCBI_GP:OFJ78987.1;Name=OFJ78987.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270954.1;locus_tag=HMPREF2844_06070;product=phosphopyruvate hydratase;protein_id=OFJ78987.1;transl_table=11 KV808229.1 Genbank gene 7936 8214 . + . ID=gene-HMPREF2844_06075;Name=HMPREF2844_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06075 KV808229.1 Protein Homology CDS 7936 8214 . + 0 ID=cds-OFJ78988.1;Parent=gene-HMPREF2844_06075;Dbxref=NCBI_GP:OFJ78988.1;Name=OFJ78988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752666.1;locus_tag=HMPREF2844_06075;product=cell division protein FtsB;protein_id=OFJ78988.1;transl_table=11 KV808229.1 Genbank gene 8523 9017 . + . ID=gene-HMPREF2844_06080;Name=HMPREF2844_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06080 KV808229.1 Protein Homology CDS 8523 9017 . + 0 ID=cds-OFJ78989.1;Parent=gene-HMPREF2844_06080;Dbxref=NCBI_GP:OFJ78989.1;Name=OFJ78989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743239.1;locus_tag=HMPREF2844_06080;product=hypothetical protein;protein_id=OFJ78989.1;transl_table=11 KV808229.1 Genbank gene 9178 10551 . - . ID=gene-HMPREF2844_06085;Name=HMPREF2844_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06085 KV808229.1 Protein Homology CDS 9178 10551 . - 0 ID=cds-OFJ78990.1;Parent=gene-HMPREF2844_06085;Dbxref=NCBI_GP:OFJ78990.1;Name=OFJ78990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270953.1;locus_tag=HMPREF2844_06085;product=RNA helicase;protein_id=OFJ78990.1;transl_table=11 KV808229.1 Genbank gene 10889 11833 . + . ID=gene-HMPREF2844_06090;Name=HMPREF2844_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06090 KV808229.1 Protein Homology CDS 10889 11833 . + 0 ID=cds-OFJ78991.1;Parent=gene-HMPREF2844_06090;Dbxref=NCBI_GP:OFJ78991.1;Name=OFJ78991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520340.1;locus_tag=HMPREF2844_06090;product=oxidoreductase;protein_id=OFJ78991.1;transl_table=11 KV808229.1 Genbank gene 11871 12149 . + . ID=gene-HMPREF2844_06095;Name=HMPREF2844_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06095 KV808229.1 Protein Homology CDS 11871 12149 . + 0 ID=cds-OFJ78992.1;Parent=gene-HMPREF2844_06095;Dbxref=NCBI_GP:OFJ78992.1;Name=OFJ78992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687924.1;locus_tag=HMPREF2844_06095;product=hypothetical protein;protein_id=OFJ78992.1;transl_table=11 KV808229.1 Genbank gene 12198 13349 . + . ID=gene-HMPREF2844_06100;Name=HMPREF2844_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06100 KV808229.1 Protein Homology CDS 12198 13349 . + 0 ID=cds-OFJ78993.1;Parent=gene-HMPREF2844_06100;Dbxref=NCBI_GP:OFJ78993.1;Name=OFJ78993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685349.1;locus_tag=HMPREF2844_06100;product=hypothetical protein;protein_id=OFJ78993.1;transl_table=11 KV808229.1 Genbank gene 13390 13950 . + . ID=gene-HMPREF2844_06105;Name=HMPREF2844_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06105 KV808229.1 Protein Homology CDS 13390 13950 . + 0 ID=cds-OFJ78994.1;Parent=gene-HMPREF2844_06105;Dbxref=NCBI_GP:OFJ78994.1;Name=OFJ78994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZQ8.1;locus_tag=HMPREF2844_06105;product=elongation factor P;protein_id=OFJ78994.1;transl_table=11 KV808229.1 Genbank pseudogene 14132 16867 . + . ID=gene-HMPREF2844_06110;Name=HMPREF2844_06110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06110;pseudo=true KV808229.1 Protein Homology CDS 14132 16867 . + 0 ID=cds-HMPREF2844_06110;Parent=gene-HMPREF2844_06110;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520353.1;locus_tag=HMPREF2844_06110;product=hypothetical protein;pseudo=true;transl_table=11 KV808229.1 Genbank gene 17250 18527 . + . ID=gene-HMPREF2844_06115;Name=HMPREF2844_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06115 KV808229.1 Protein Homology CDS 17250 18527 . + 0 ID=cds-OFJ78995.1;Parent=gene-HMPREF2844_06115;Dbxref=NCBI_GP:OFJ78995.1;Name=OFJ78995.1;Note=catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270949.1;locus_tag=HMPREF2844_06115;product=O-acetylhomoserine aminocarboxypropyltransferase;protein_id=OFJ78995.1;transl_table=11 KV808229.1 Genbank gene 19030 22671 . + . ID=gene-HMPREF2844_06120;Name=HMPREF2844_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06120 KV808229.1 Protein Homology CDS 19030 22671 . + 0 ID=cds-OFJ78996.1;Parent=gene-HMPREF2844_06120;Dbxref=NCBI_GP:OFJ78996.1;Name=OFJ78996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743224.1;locus_tag=HMPREF2844_06120;product=exodeoxyribonuclease V subunit beta;protein_id=OFJ78996.1;transl_table=11 ##sequence-region KV808230.1 1 20028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808230.1 Genbank region 1 20028 . + . ID=KV808230.1:1..20028;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808230.1 Genbank gene 134 493 . + . ID=gene-HMPREF2844_06125;Name=HMPREF2844_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06125 KV808230.1 Protein Homology CDS 134 493 . + 0 ID=cds-OFJ78980.1;Parent=gene-HMPREF2844_06125;Dbxref=NCBI_GP:OFJ78980.1;Name=OFJ78980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269793.1;locus_tag=HMPREF2844_06125;product=hypothetical protein;protein_id=OFJ78980.1;transl_table=11 KV808230.1 Genbank gene 490 2334 . + . ID=gene-HMPREF2844_06130;Name=HMPREF2844_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06130 KV808230.1 Protein Homology CDS 490 2334 . + 0 ID=cds-OFJ78977.1;Parent=gene-HMPREF2844_06130;Dbxref=NCBI_GP:OFJ78977.1;Name=OFJ78977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688036.1;locus_tag=HMPREF2844_06130;product=polymerase;protein_id=OFJ78977.1;transl_table=11 KV808230.1 Genbank gene 2674 5892 . + . ID=gene-HMPREF2844_06135;Name=HMPREF2844_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06135 KV808230.1 Protein Homology CDS 2674 5892 . + 0 ID=cds-OFJ78978.1;Parent=gene-HMPREF2844_06135;Dbxref=NCBI_GP:OFJ78978.1;Name=OFJ78978.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779709.1;locus_tag=HMPREF2844_06135;product=exodeoxyribonuclease V subunit gamma;protein_id=OFJ78978.1;transl_table=11 KV808230.1 Genbank gene 6599 9361 . + . ID=gene-HMPREF2844_06140;Name=HMPREF2844_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06140 KV808230.1 Protein Homology CDS 6599 9361 . + 0 ID=cds-OFJ78979.1;Parent=gene-HMPREF2844_06140;Dbxref=NCBI_GP:OFJ78979.1;Name=OFJ78979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269796.1;locus_tag=HMPREF2844_06140;product=TonB-dependent receptor;protein_id=OFJ78979.1;transl_table=11 KV808230.1 Genbank gene 9904 10143 . - . ID=gene-HMPREF2844_06145;Name=HMPREF2844_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06145 KV808230.1 Protein Homology CDS 9904 10143 . - 0 ID=cds-OFJ78958.1;Parent=gene-HMPREF2844_06145;Dbxref=NCBI_GP:OFJ78958.1;Name=OFJ78958.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004521099.1;locus_tag=HMPREF2844_06145;product=hemolysin;protein_id=OFJ78958.1;transl_table=11 KV808230.1 Genbank gene 10411 11178 . - . ID=gene-HMPREF2844_06150;Name=HMPREF2844_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06150 KV808230.1 Protein Homology CDS 10411 11178 . - 0 ID=cds-OFJ78852.1;Parent=gene-HMPREF2844_06150;Dbxref=NCBI_GP:OFJ78852.1;Name=OFJ78852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686585.1;locus_tag=HMPREF2844_06150;product=deoxyribonuclease HsdR;protein_id=OFJ78852.1;transl_table=11 KV808230.1 Genbank gene 11319 12260 . - . ID=gene-HMPREF2844_06155;Name=HMPREF2844_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06155 KV808230.1 Protein Homology CDS 11319 12260 . - 0 ID=cds-OFJ78849.1;Parent=gene-HMPREF2844_06155;Dbxref=NCBI_GP:OFJ78849.1;Name=OFJ78849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312204.1;locus_tag=HMPREF2844_06155;product=D-alanyl-D-alanine endopeptidase;protein_id=OFJ78849.1;transl_table=11 KV808230.1 Genbank gene 12581 13849 . + . ID=gene-HMPREF2844_06160;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF2844_06160 KV808230.1 Protein Homology CDS 12581 13849 . + 0 ID=cds-OFJ78850.1;Parent=gene-HMPREF2844_06160;Dbxref=NCBI_GP:OFJ78850.1;Name=OFJ78850.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768201.1;locus_tag=HMPREF2844_06160;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=OFJ78850.1;transl_table=11 KV808230.1 Genbank gene 14090 16675 . + . ID=gene-HMPREF2844_06165;Name=HMPREF2844_06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06165 KV808230.1 Protein Homology CDS 14090 16675 . + 0 ID=cds-OFJ78851.1;Parent=gene-HMPREF2844_06165;Dbxref=NCBI_GP:OFJ78851.1;Name=OFJ78851.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686102.1;locus_tag=HMPREF2844_06165;product=aconitate hydratase B;protein_id=OFJ78851.1;transl_table=11 KV808230.1 Genbank gene 16820 17692 . - . ID=gene-HMPREF2844_06170;Name=HMPREF2844_06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06170 KV808230.1 Protein Homology CDS 16820 17692 . - 0 ID=cds-OFJ78853.1;Parent=gene-HMPREF2844_06170;Dbxref=NCBI_GP:OFJ78853.1;Name=OFJ78853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310995.1;locus_tag=HMPREF2844_06170;product=chorismate mutase;protein_id=OFJ78853.1;transl_table=11 KV808230.1 Genbank gene 17862 19994 . + . ID=gene-HMPREF2844_06175;Name=HMPREF2844_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06175 KV808230.1 Protein Homology CDS 17862 19994 . + 0 ID=cds-OFJ78854.1;Parent=gene-HMPREF2844_06175;Dbxref=NCBI_GP:OFJ78854.1;Name=OFJ78854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743521.1;locus_tag=HMPREF2844_06175;product=AsmA family protein;protein_id=OFJ78854.1;transl_table=11 ##sequence-region KV808231.1 1 2618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808231.1 Genbank region 1 2618 . + . ID=KV808231.1:1..2618;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808231.1 Genbank pseudogene 1 270 . + . ID=gene-HMPREF2844_06180;Name=HMPREF2844_06180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06180;pseudo=true KV808231.1 GeneMarkS+ CDS 1 270 . + 2 ID=cds-HMPREF2844_06180;Parent=gene-HMPREF2844_06180;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06180;product=hypothetical protein;pseudo=true;transl_table=11 KV808231.1 Genbank pseudogene 371 1004 . + . ID=gene-HMPREF2844_06185;Name=HMPREF2844_06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06185;pseudo=true KV808231.1 GeneMarkS+ CDS 371 1004 . + 1 ID=cds-HMPREF2844_06185;Parent=gene-HMPREF2844_06185;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06185;product=outer membrane insertion C- signal;pseudo=true;transl_table=11 KV808231.1 Genbank gene 1238 2551 . + . ID=gene-HMPREF2844_06190;Name=HMPREF2844_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06190 KV808231.1 Protein Homology CDS 1238 2551 . + 0 ID=cds-OFJ78801.1;Parent=gene-HMPREF2844_06190;Dbxref=NCBI_GP:OFJ78801.1;Name=OFJ78801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312668.1;locus_tag=HMPREF2844_06190;product=guanine permease;protein_id=OFJ78801.1;transl_table=11 ##sequence-region KV808232.1 1 13883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808232.1 Genbank region 1 13883 . + . ID=KV808232.1:1..13883;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808232.1 Genbank gene 265 786 . - . ID=gene-HMPREF2844_06195;Name=HMPREF2844_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06195 KV808232.1 Protein Homology CDS 265 786 . - 0 ID=cds-OFJ78745.1;Parent=gene-HMPREF2844_06195;Dbxref=NCBI_GP:OFJ78745.1;Name=OFJ78745.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270424.1;locus_tag=HMPREF2844_06195;product=thiol reductase thioredoxin;protein_id=OFJ78745.1;transl_table=11 KV808232.1 Genbank gene 1119 1583 . - . ID=gene-HMPREF2844_06200;Name=HMPREF2844_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06200 KV808232.1 Protein Homology CDS 1119 1583 . - 0 ID=cds-OFJ78746.1;Parent=gene-HMPREF2844_06200;Dbxref=NCBI_GP:OFJ78746.1;Name=OFJ78746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270425.1;locus_tag=HMPREF2844_06200;product=protein-tyrosine-phosphatase;protein_id=OFJ78746.1;transl_table=11 KV808232.1 Genbank gene 1591 2691 . - . ID=gene-HMPREF2844_06205;Name=HMPREF2844_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06205 KV808232.1 Protein Homology CDS 1591 2691 . - 0 ID=cds-OFJ78747.1;Parent=gene-HMPREF2844_06205;Dbxref=NCBI_GP:OFJ78747.1;Name=OFJ78747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312124.1;locus_tag=HMPREF2844_06205;product=conjugal transfer protein;protein_id=OFJ78747.1;transl_table=11 KV808232.1 Genbank gene 2805 3398 . - . ID=gene-HMPREF2844_06210;Name=HMPREF2844_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06210 KV808232.1 Protein Homology CDS 2805 3398 . - 0 ID=cds-OFJ78748.1;Parent=gene-HMPREF2844_06210;Dbxref=NCBI_GP:OFJ78748.1;Name=OFJ78748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273335.1;locus_tag=HMPREF2844_06210;product=GTP cyclohydrolase II;protein_id=OFJ78748.1;transl_table=11 KV808232.1 Genbank gene 3391 4059 . - . ID=gene-HMPREF2844_06215;Name=HMPREF2844_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06215 KV808232.1 Protein Homology CDS 3391 4059 . - 0 ID=cds-OFJ78749.1;Parent=gene-HMPREF2844_06215;Dbxref=NCBI_GP:OFJ78749.1;Name=OFJ78749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744158.1;locus_tag=HMPREF2844_06215;product=hypothetical protein;protein_id=OFJ78749.1;transl_table=11 KV808232.1 Genbank gene 4193 4277 . + . ID=gene-HMPREF2844_06220;Name=HMPREF2844_06220;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_06220 KV808232.1 tRNAscan-SE tRNA 4193 4277 . + . ID=rna-HMPREF2844_06220;Parent=gene-HMPREF2844_06220;anticodon=(pos:4227..4229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_06220;product=tRNA-Leu KV808232.1 tRNAscan-SE exon 4193 4277 . + . ID=exon-HMPREF2844_06220-1;Parent=rna-HMPREF2844_06220;anticodon=(pos:4227..4229);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_06220;product=tRNA-Leu KV808232.1 Genbank pseudogene 4498 4732 . + . ID=gene-HMPREF2844_06225;Name=HMPREF2844_06225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06225;pseudo=true KV808232.1 Protein Homology CDS 4498 4732 . + 0 ID=cds-HMPREF2844_06225;Parent=gene-HMPREF2844_06225;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270390.1;locus_tag=HMPREF2844_06225;product=integrase;pseudo=true;transl_table=11 KV808232.1 Genbank gene 4833 5790 . + . ID=gene-HMPREF2844_06230;Name=HMPREF2844_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06230;partial=true;start_range=.,4833 KV808232.1 Protein Homology CDS 4833 5790 . + 1 ID=cds-OFJ78664.1;Parent=gene-HMPREF2844_06230;Dbxref=NCBI_GP:OFJ78664.1;Name=OFJ78664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677401.1;locus_tag=HMPREF2844_06230;partial=true;product=integrase;protein_id=OFJ78664.1;start_range=.,4833;transl_table=11 KV808232.1 Genbank gene 5811 6329 . + . ID=gene-HMPREF2844_06235;Name=HMPREF2844_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06235 KV808232.1 GeneMarkS+ CDS 5811 6329 . + 0 ID=cds-OFJ78665.1;Parent=gene-HMPREF2844_06235;Dbxref=NCBI_GP:OFJ78665.1;Name=OFJ78665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06235;product=hypothetical protein;protein_id=OFJ78665.1;transl_table=11 KV808232.1 Genbank gene 6448 6660 . + . ID=gene-HMPREF2844_06240;Name=HMPREF2844_06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06240 KV808232.1 Protein Homology CDS 6448 6660 . + 0 ID=cds-OFJ78666.1;Parent=gene-HMPREF2844_06240;Dbxref=NCBI_GP:OFJ78666.1;Name=OFJ78666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285360.1;locus_tag=HMPREF2844_06240;product=protein convertase;protein_id=OFJ78666.1;transl_table=11 KV808232.1 Genbank gene 6724 6963 . + . ID=gene-HMPREF2844_06245;Name=HMPREF2844_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06245 KV808232.1 Protein Homology CDS 6724 6963 . + 0 ID=cds-OFJ78667.1;Parent=gene-HMPREF2844_06245;Dbxref=NCBI_GP:OFJ78667.1;Name=OFJ78667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763931.1;locus_tag=HMPREF2844_06245;product=DNA-binding protein;protein_id=OFJ78667.1;transl_table=11 KV808232.1 Genbank gene 6980 7678 . + . ID=gene-HMPREF2844_06250;Name=HMPREF2844_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06250 KV808232.1 Protein Homology CDS 6980 7678 . + 0 ID=cds-OFJ78668.1;Parent=gene-HMPREF2844_06250;Dbxref=NCBI_GP:OFJ78668.1;Name=OFJ78668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687843.1;locus_tag=HMPREF2844_06250;product=hypothetical protein;protein_id=OFJ78668.1;transl_table=11 KV808232.1 Genbank gene 7747 8286 . + . ID=gene-HMPREF2844_06255;Name=HMPREF2844_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06255 KV808232.1 Protein Homology CDS 7747 8286 . + 0 ID=cds-OFJ78669.1;Parent=gene-HMPREF2844_06255;Dbxref=NCBI_GP:OFJ78669.1;Name=OFJ78669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687844.1;locus_tag=HMPREF2844_06255;product=terminase;protein_id=OFJ78669.1;transl_table=11 KV808232.1 Genbank gene 8572 8823 . + . ID=gene-HMPREF2844_06260;Name=HMPREF2844_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06260 KV808232.1 Protein Homology CDS 8572 8823 . + 0 ID=cds-OFJ78670.1;Parent=gene-HMPREF2844_06260;Dbxref=NCBI_GP:OFJ78670.1;Name=OFJ78670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744175.1;locus_tag=HMPREF2844_06260;product=hypothetical protein;protein_id=OFJ78670.1;transl_table=11 KV808232.1 Genbank gene 8960 9175 . + . ID=gene-HMPREF2844_06265;Name=HMPREF2844_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06265 KV808232.1 Protein Homology CDS 8960 9175 . + 0 ID=cds-OFJ78671.1;Parent=gene-HMPREF2844_06265;Dbxref=NCBI_GP:OFJ78671.1;Name=OFJ78671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744176.1;locus_tag=HMPREF2844_06265;product=PTS sugar transporter subunit IID;protein_id=OFJ78671.1;transl_table=11 KV808232.1 Genbank gene 9172 10317 . + . ID=gene-HMPREF2844_06270;Name=HMPREF2844_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06270 KV808232.1 Protein Homology CDS 9172 10317 . + 0 ID=cds-OFJ78672.1;Parent=gene-HMPREF2844_06270;Dbxref=NCBI_GP:OFJ78672.1;Name=OFJ78672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687847.1;locus_tag=HMPREF2844_06270;product=DNA primase;protein_id=OFJ78672.1;transl_table=11 KV808232.1 Genbank gene 10322 12025 . + . ID=gene-HMPREF2844_06275;Name=HMPREF2844_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06275 KV808232.1 Protein Homology CDS 10322 12025 . + 0 ID=cds-OFJ78675.1;Parent=gene-HMPREF2844_06275;Dbxref=NCBI_GP:OFJ78675.1;Name=OFJ78675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019389531.1;locus_tag=HMPREF2844_06275;product=helicase;protein_id=OFJ78675.1;transl_table=11 KV808232.1 Genbank gene 12669 13007 . + . ID=gene-HMPREF2844_06280;Name=HMPREF2844_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06280 KV808232.1 Protein Homology CDS 12669 13007 . + 0 ID=cds-OFJ78673.1;Parent=gene-HMPREF2844_06280;Dbxref=NCBI_GP:OFJ78673.1;Name=OFJ78673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010378701.1;locus_tag=HMPREF2844_06280;product=hypothetical protein;protein_id=OFJ78673.1;transl_table=11 KV808232.1 Genbank gene 13004 13321 . + . ID=gene-HMPREF2844_06285;Name=HMPREF2844_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06285 KV808232.1 Protein Homology CDS 13004 13321 . + 0 ID=cds-OFJ78674.1;Parent=gene-HMPREF2844_06285;Dbxref=NCBI_GP:OFJ78674.1;Name=OFJ78674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270431.1;locus_tag=HMPREF2844_06285;product=XRE family transcriptional regulator;protein_id=OFJ78674.1;transl_table=11 ##sequence-region KV808233.1 1 21878 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808233.1 Genbank region 1 21878 . + . ID=KV808233.1:1..21878;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808233.1 Genbank pseudogene 1 229 . - . ID=gene-HMPREF2844_06290;Name=HMPREF2844_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06290;pseudo=true KV808233.1 Protein Homology CDS 1 229 . - 0 ID=cds-HMPREF2844_06290;Parent=gene-HMPREF2844_06290;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247814.1;locus_tag=HMPREF2844_06290;product=transposase;pseudo=true;transl_table=11 KV808233.1 Genbank gene 226 483 . - . ID=gene-HMPREF2844_06295;Name=HMPREF2844_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06295 KV808233.1 GeneMarkS+ CDS 226 483 . - 0 ID=cds-OFJ78623.1;Parent=gene-HMPREF2844_06295;Dbxref=NCBI_GP:OFJ78623.1;Name=OFJ78623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06295;product=hypothetical protein;protein_id=OFJ78623.1;transl_table=11 KV808233.1 Genbank gene 720 2057 . - . ID=gene-HMPREF2844_06300;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF2844_06300 KV808233.1 Protein Homology CDS 720 2057 . - 0 ID=cds-OFJ78624.1;Parent=gene-HMPREF2844_06300;Dbxref=NCBI_GP:OFJ78624.1;Name=OFJ78624.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312754.1;locus_tag=HMPREF2844_06300;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=OFJ78624.1;transl_table=11 KV808233.1 Genbank gene 2101 2723 . - . ID=gene-HMPREF2844_06305;Name=HMPREF2844_06305;end_range=2723,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06305;partial=true KV808233.1 Protein Homology CDS 2101 2723 . - 2 ID=cds-OFJ78625.1;Parent=gene-HMPREF2844_06305;Dbxref=NCBI_GP:OFJ78625.1;Name=OFJ78625.1;end_range=2723,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767349.1;locus_tag=HMPREF2844_06305;partial=true;product=hypothetical protein;protein_id=OFJ78625.1;transl_table=11 KV808233.1 Genbank pseudogene 2824 3271 . - . ID=gene-HMPREF2844_06310;Name=HMPREF2844_06310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06310;pseudo=true KV808233.1 Protein Homology CDS 2824 3271 . - 0 ID=cds-HMPREF2844_06310;Parent=gene-HMPREF2844_06310;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767349.1;locus_tag=HMPREF2844_06310;product=hypothetical protein;pseudo=true;transl_table=11 KV808233.1 Genbank gene 3631 4119 . - . ID=gene-HMPREF2844_06315;Name=HMPREF2844_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06315 KV808233.1 Protein Homology CDS 3631 4119 . - 0 ID=cds-OFJ78574.1;Parent=gene-HMPREF2844_06315;Dbxref=NCBI_GP:OFJ78574.1;Name=OFJ78574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686553.1;locus_tag=HMPREF2844_06315;product=globin;protein_id=OFJ78574.1;transl_table=11 KV808233.1 Genbank gene 4332 4676 . + . ID=gene-HMPREF2844_06320;Name=HMPREF2844_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06320 KV808233.1 Protein Homology CDS 4332 4676 . + 0 ID=cds-OFJ78575.1;Parent=gene-HMPREF2844_06320;Dbxref=NCBI_GP:OFJ78575.1;Name=OFJ78575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742821.1;locus_tag=HMPREF2844_06320;product=murein hydrolase transporter LrgA;protein_id=OFJ78575.1;transl_table=11 KV808233.1 Genbank gene 4676 5377 . + . ID=gene-HMPREF2844_06325;Name=HMPREF2844_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06325 KV808233.1 Protein Homology CDS 4676 5377 . + 0 ID=cds-OFJ78576.1;Parent=gene-HMPREF2844_06325;Dbxref=NCBI_GP:OFJ78576.1;Name=OFJ78576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713587.1;locus_tag=HMPREF2844_06325;product=murein hydrolase transporter LrgB;protein_id=OFJ78576.1;transl_table=11 KV808233.1 Genbank gene 5460 6680 . + . ID=gene-HMPREF2844_06330;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=HMPREF2844_06330 KV808233.1 Protein Homology CDS 5460 6680 . + 0 ID=cds-OFJ78577.1;Parent=gene-HMPREF2844_06330;Dbxref=NCBI_GP:OFJ78577.1;Name=OFJ78577.1;Note=bifunctional arginine biosynthesis protein ArgJ%3B functions at the 1st and 5th steps in arginine biosynthesis%3B involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate;gbkey=CDS;gene=argJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742788.1;locus_tag=HMPREF2844_06330;product=bifunctional ornithine acetyltransferase/N-acetylglutamate synthase;protein_id=OFJ78577.1;transl_table=11 KV808233.1 Genbank gene 7576 8415 . - . ID=gene-HMPREF2844_06335;Name=HMPREF2844_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06335 KV808233.1 Protein Homology CDS 7576 8415 . - 0 ID=cds-OFJ78578.1;Parent=gene-HMPREF2844_06335;Dbxref=NCBI_GP:OFJ78578.1;Name=OFJ78578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312709.1;locus_tag=HMPREF2844_06335;product=uracil-DNA glycosylase;protein_id=OFJ78578.1;transl_table=11 KV808233.1 Genbank gene 8409 8852 . - . ID=gene-HMPREF2844_06340;Name=HMPREF2844_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06340 KV808233.1 Protein Homology CDS 8409 8852 . - 0 ID=cds-OFJ78579.1;Parent=gene-HMPREF2844_06340;Dbxref=NCBI_GP:OFJ78579.1;Name=OFJ78579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003702201.1;locus_tag=HMPREF2844_06340;product=ribosomal-protein-alanine N-acetyltransferase RimI;protein_id=OFJ78579.1;transl_table=11 KV808233.1 Genbank gene 8849 9526 . - . ID=gene-HMPREF2844_06345;Name=HMPREF2844_06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06345 KV808233.1 Protein Homology CDS 8849 9526 . - 0 ID=cds-OFJ78580.1;Parent=gene-HMPREF2844_06345;Dbxref=NCBI_GP:OFJ78580.1;Name=OFJ78580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742815.1;locus_tag=HMPREF2844_06345;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=OFJ78580.1;transl_table=11 KV808233.1 Genbank gene 9718 10623 . + . ID=gene-HMPREF2844_06350;Name=HMPREF2844_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06350 KV808233.1 Protein Homology CDS 9718 10623 . + 0 ID=cds-OFJ78581.1;Parent=gene-HMPREF2844_06350;Dbxref=NCBI_GP:OFJ78581.1;Name=OFJ78581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686956.1;locus_tag=HMPREF2844_06350;product=tRNA glutamyl-Q synthetase;protein_id=OFJ78581.1;transl_table=11 KV808233.1 Genbank gene 10810 11538 . + . ID=gene-HMPREF2844_06355;Name=HMPREF2844_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06355 KV808233.1 Protein Homology CDS 10810 11538 . + 0 ID=cds-OFJ78582.1;Parent=gene-HMPREF2844_06355;Dbxref=NCBI_GP:OFJ78582.1;Name=OFJ78582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748328.1;locus_tag=HMPREF2844_06355;product=DNA-binding response regulator;protein_id=OFJ78582.1;transl_table=11 KV808233.1 Genbank gene 12233 13297 . - . ID=gene-HMPREF2844_06360;Name=HMPREF2844_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06360 KV808233.1 Protein Homology CDS 12233 13297 . - 0 ID=cds-OFJ78583.1;Parent=gene-HMPREF2844_06360;Dbxref=NCBI_GP:OFJ78583.1;Name=OFJ78583.1;Note=class II aldolase%3B catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis and gluconeogenesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219833.1;locus_tag=HMPREF2844_06360;product=fructose-1%2C6-bisphosphate aldolase;protein_id=OFJ78583.1;transl_table=11 KV808233.1 Genbank gene 13509 13937 . + . ID=gene-HMPREF2844_06365;Name=HMPREF2844_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06365 KV808233.1 Protein Homology CDS 13509 13937 . + 0 ID=cds-OFJ78584.1;Parent=gene-HMPREF2844_06365;Dbxref=NCBI_GP:OFJ78584.1;Name=OFJ78584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271628.1;locus_tag=HMPREF2844_06365;product=esterase;protein_id=OFJ78584.1;transl_table=11 KV808233.1 Genbank gene 13940 14839 . + . ID=gene-HMPREF2844_06370;Name=HMPREF2844_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06370 KV808233.1 Protein Homology CDS 13940 14839 . + 0 ID=cds-OFJ78585.1;Parent=gene-HMPREF2844_06370;Dbxref=NCBI_GP:OFJ78585.1;Name=OFJ78585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742802.1;locus_tag=HMPREF2844_06370;product=recombinase XerC;protein_id=OFJ78585.1;transl_table=11 KV808233.1 Genbank gene 14865 16265 . + . ID=gene-HMPREF2844_06375;Name=HMPREF2844_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06375 KV808233.1 Protein Homology CDS 14865 16265 . + 0 ID=cds-OFJ78586.1;Parent=gene-HMPREF2844_06375;Dbxref=NCBI_GP:OFJ78586.1;Name=OFJ78586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224807.1;locus_tag=HMPREF2844_06375;product=L-serine ammonia-lyase;protein_id=OFJ78586.1;transl_table=11 KV808233.1 Genbank gene 16484 18874 . + . ID=gene-HMPREF2844_06380;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF2844_06380 KV808233.1 Protein Homology CDS 16484 18874 . + 0 ID=cds-OFJ78587.1;Parent=gene-HMPREF2844_06380;Dbxref=NCBI_GP:OFJ78587.1;Name=OFJ78587.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313090.1;locus_tag=HMPREF2844_06380;product=DNA gyrase subunit B;protein_id=OFJ78587.1;transl_table=11 KV808233.1 Genbank gene 19279 19722 . + . ID=gene-HMPREF2844_06385;Name=HMPREF2844_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06385 KV808233.1 Protein Homology CDS 19279 19722 . + 0 ID=cds-OFJ78588.1;Parent=gene-HMPREF2844_06385;Dbxref=NCBI_GP:OFJ78588.1;Name=OFJ78588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271624.1;locus_tag=HMPREF2844_06385;product=ribose-5-phosphate isomerase;protein_id=OFJ78588.1;transl_table=11 KV808233.1 Genbank gene 20284 21408 . - . ID=gene-HMPREF2844_06390;Name=HMPREF2844_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06390 KV808233.1 Protein Homology CDS 20284 21408 . - 0 ID=cds-OFJ78589.1;Parent=gene-HMPREF2844_06390;Dbxref=NCBI_GP:OFJ78589.1;Name=OFJ78589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P30692.1;locus_tag=HMPREF2844_06390;product=hypothetical protein;protein_id=OFJ78589.1;transl_table=11 ##sequence-region KV808234.1 1 459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808234.1 Genbank region 1 459 . + . ID=KV808234.1:1..459;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808234.1 Genbank pseudogene 1 454 . - . ID=gene-HMPREF2844_06395;Name=HMPREF2844_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06395;pseudo=true KV808234.1 GeneMarkS+ CDS 1 454 . - 0 ID=cds-HMPREF2844_06395;Parent=gene-HMPREF2844_06395;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06395;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808235.1 1 1314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808235.1 Genbank region 1 1314 . + . ID=KV808235.1:1..1314;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808235.1 Genbank pseudogene 341 806 . - . ID=gene-HMPREF2844_06400;Name=HMPREF2844_06400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06400;pseudo=true KV808235.1 Protein Homology CDS 341 806 . - 0 ID=cds-HMPREF2844_06400;Parent=gene-HMPREF2844_06400;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011258815.1;locus_tag=HMPREF2844_06400;product=transposase;pseudo=true;transl_table=11 KV808235.1 Genbank gene 934 1152 . + . ID=gene-HMPREF2844_06405;Name=HMPREF2844_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06405 KV808235.1 GeneMarkS+ CDS 934 1152 . + 0 ID=cds-OFJ78486.1;Parent=gene-HMPREF2844_06405;Dbxref=NCBI_GP:OFJ78486.1;Name=OFJ78486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06405;product=hypothetical protein;protein_id=OFJ78486.1;transl_table=11 ##sequence-region KV808236.1 1 4490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808236.1 Genbank region 1 4490 . + . ID=KV808236.1:1..4490;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808236.1 Genbank gene 156 380 . + . ID=gene-HMPREF2844_06410;Name=HMPREF2844_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06410 KV808236.1 GeneMarkS+ CDS 156 380 . + 0 ID=cds-OFJ78433.1;Parent=gene-HMPREF2844_06410;Dbxref=NCBI_GP:OFJ78433.1;Name=OFJ78433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06410;product=hypothetical protein;protein_id=OFJ78433.1;transl_table=11 KV808236.1 Genbank gene 452 2215 . - . ID=gene-HMPREF2844_06415;Name=HMPREF2844_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06415 KV808236.1 Protein Homology CDS 452 2215 . - 0 ID=cds-OFJ78434.1;Parent=gene-HMPREF2844_06415;Dbxref=NCBI_GP:OFJ78434.1;Name=OFJ78434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699514.1;locus_tag=HMPREF2844_06415;product=potassium transporter;protein_id=OFJ78434.1;transl_table=11 KV808236.1 Genbank gene 2345 3310 . - . ID=gene-HMPREF2844_06420;Name=HMPREF2844_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06420 KV808236.1 Protein Homology CDS 2345 3310 . - 0 ID=cds-OFJ78435.1;Parent=gene-HMPREF2844_06420;Dbxref=NCBI_GP:OFJ78435.1;Name=OFJ78435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269930.1;locus_tag=HMPREF2844_06420;product=dehydrogenase;protein_id=OFJ78435.1;transl_table=11 KV808236.1 Genbank gene 3490 4389 . + . ID=gene-HMPREF2844_06425;Name=HMPREF2844_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06425 KV808236.1 Protein Homology CDS 3490 4389 . + 0 ID=cds-OFJ78436.1;Parent=gene-HMPREF2844_06425;Dbxref=NCBI_GP:OFJ78436.1;Name=OFJ78436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742241.1;locus_tag=HMPREF2844_06425;product=LysR family transcriptional regulator;protein_id=OFJ78436.1;transl_table=11 ##sequence-region KV808237.1 1 57343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808237.1 Genbank region 1 57343 . + . ID=KV808237.1:1..57343;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808237.1 Genbank gene 79 1446 . - . ID=gene-HMPREF2844_06430;Name=HMPREF2844_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06430 KV808237.1 Protein Homology CDS 79 1446 . - 0 ID=cds-OFJ78411.1;Parent=gene-HMPREF2844_06430;Dbxref=NCBI_GP:OFJ78411.1;Name=OFJ78411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778569.1;locus_tag=HMPREF2844_06430;product=oxidoreductase;protein_id=OFJ78411.1;transl_table=11 KV808237.1 Genbank gene 1582 1833 . - . ID=gene-HMPREF2844_06435;Name=HMPREF2844_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06435 KV808237.1 Protein Homology CDS 1582 1833 . - 0 ID=cds-OFJ78412.1;Parent=gene-HMPREF2844_06435;Dbxref=NCBI_GP:OFJ78412.1;Name=OFJ78412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239902.1;locus_tag=HMPREF2844_06435;product=hypothetical protein;protein_id=OFJ78412.1;transl_table=11 KV808237.1 Genbank gene 2406 2885 . + . ID=gene-HMPREF2844_06440;Name=HMPREF2844_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06440 KV808237.1 Protein Homology CDS 2406 2885 . + 0 ID=cds-OFJ78413.1;Parent=gene-HMPREF2844_06440;Dbxref=NCBI_GP:OFJ78413.1;Name=OFJ78413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448722.1;locus_tag=HMPREF2844_06440;product=peptidylprolyl isomerase;protein_id=OFJ78413.1;transl_table=11 KV808237.1 Genbank gene 3162 7472 . + . ID=gene-HMPREF2844_06445;Name=HMPREF2844_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06445 KV808237.1 Protein Homology CDS 3162 7472 . + 0 ID=cds-OFJ78414.1;Parent=gene-HMPREF2844_06445;Dbxref=NCBI_GP:OFJ78414.1;Name=OFJ78414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765394.1;locus_tag=HMPREF2844_06445;product=4-alpha-glucanotransferase;protein_id=OFJ78414.1;transl_table=11 KV808237.1 Genbank gene 7732 8424 . - . ID=gene-HMPREF2844_06450;Name=HMPREF2844_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06450 KV808237.1 Protein Homology CDS 7732 8424 . - 0 ID=cds-OFJ78415.1;Parent=gene-HMPREF2844_06450;Dbxref=NCBI_GP:OFJ78415.1;Name=OFJ78415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173735.1;locus_tag=HMPREF2844_06450;product=hypothetical protein;protein_id=OFJ78415.1;transl_table=11 KV808237.1 Genbank gene 8650 10041 . + . ID=gene-HMPREF2844_06455;Name=HMPREF2844_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06455 KV808237.1 Protein Homology CDS 8650 10041 . + 0 ID=cds-OFJ78416.1;Parent=gene-HMPREF2844_06455;Dbxref=NCBI_GP:OFJ78416.1;Name=OFJ78416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755428.1;locus_tag=HMPREF2844_06455;product=oxidoreductase;protein_id=OFJ78416.1;transl_table=11 KV808237.1 Genbank gene 10231 11400 . - . ID=gene-HMPREF2844_06460;Name=HMPREF2844_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06460 KV808237.1 GeneMarkS+ CDS 10231 11400 . - 0 ID=cds-OFJ78417.1;Parent=gene-HMPREF2844_06460;Dbxref=NCBI_GP:OFJ78417.1;Name=OFJ78417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06460;product=hypothetical protein;protein_id=OFJ78417.1;transl_table=11 KV808237.1 Genbank gene 11435 11728 . - . ID=gene-HMPREF2844_06465;Name=HMPREF2844_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06465 KV808237.1 Protein Homology CDS 11435 11728 . - 0 ID=cds-OFJ78418.1;Parent=gene-HMPREF2844_06465;Dbxref=NCBI_GP:OFJ78418.1;Name=OFJ78418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269778.1;locus_tag=HMPREF2844_06465;product=CRISPR-associated protein;protein_id=OFJ78418.1;transl_table=11 KV808237.1 Genbank gene 11748 12866 . - . ID=gene-HMPREF2844_06470;Name=HMPREF2844_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06470 KV808237.1 GeneMarkS+ CDS 11748 12866 . - 0 ID=cds-OFJ78419.1;Parent=gene-HMPREF2844_06470;Dbxref=NCBI_GP:OFJ78419.1;Name=OFJ78419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06470;product=hypothetical protein;protein_id=OFJ78419.1;transl_table=11 KV808237.1 Genbank gene 13395 13673 . + . ID=gene-HMPREF2844_06475;Name=HMPREF2844_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06475 KV808237.1 GeneMarkS+ CDS 13395 13673 . + 0 ID=cds-OFJ78420.1;Parent=gene-HMPREF2844_06475;Dbxref=NCBI_GP:OFJ78420.1;Name=OFJ78420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06475;product=hypothetical protein;protein_id=OFJ78420.1;transl_table=11 KV808237.1 Genbank gene 13694 14677 . + . ID=gene-HMPREF2844_06480;Name=HMPREF2844_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06480 KV808237.1 GeneMarkS+ CDS 13694 14677 . + 0 ID=cds-OFJ78421.1;Parent=gene-HMPREF2844_06480;Dbxref=NCBI_GP:OFJ78421.1;Name=OFJ78421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06480;product=hypothetical protein;protein_id=OFJ78421.1;transl_table=11 KV808237.1 Genbank gene 14674 14997 . + . ID=gene-HMPREF2844_06485;Name=HMPREF2844_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06485 KV808237.1 GeneMarkS+ CDS 14674 14997 . + 0 ID=cds-OFJ78422.1;Parent=gene-HMPREF2844_06485;Dbxref=NCBI_GP:OFJ78422.1;Name=OFJ78422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06485;product=hypothetical protein;protein_id=OFJ78422.1;transl_table=11 KV808237.1 Genbank direct_repeat 16162 16472 . + . ID=id-KV808237.1:16162..16472;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=65..100;rpt_unit_seq=gtcttaatcccctagtgatggggctttgtttttatc KV808237.1 Genbank direct_repeat 17037 17476 . + . ID=id-KV808237.1:17037..17476;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..26;rpt_unit_seq=taatcccctagtgatggggctttgtt KV808237.1 Genbank gene 18008 18973 . - . ID=gene-HMPREF2844_06490;Name=HMPREF2844_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06490 KV808237.1 GeneMarkS+ CDS 18008 18973 . - 0 ID=cds-OFJ78380.1;Parent=gene-HMPREF2844_06490;Dbxref=NCBI_GP:OFJ78380.1;Name=OFJ78380.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06490;product=hypothetical protein;protein_id=OFJ78380.1;transl_table=11 KV808237.1 Genbank gene 19210 20871 . - . ID=gene-HMPREF2844_06495;Name=HMPREF2844_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06495 KV808237.1 GeneMarkS+ CDS 19210 20871 . - 0 ID=cds-OFJ78381.1;Parent=gene-HMPREF2844_06495;Dbxref=NCBI_GP:OFJ78381.1;Name=OFJ78381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06495;product=hypothetical protein;protein_id=OFJ78381.1;transl_table=11 KV808237.1 Genbank gene 20934 21872 . - . ID=gene-HMPREF2844_06500;Name=HMPREF2844_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06500 KV808237.1 Protein Homology CDS 20934 21872 . - 0 ID=cds-OFJ78382.1;Parent=gene-HMPREF2844_06500;Dbxref=NCBI_GP:OFJ78382.1;Name=OFJ78382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017839239.1;locus_tag=HMPREF2844_06500;product=hypothetical protein;protein_id=OFJ78382.1;transl_table=11 KV808237.1 Genbank gene 21876 22586 . - . ID=gene-HMPREF2844_06505;Name=HMPREF2844_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06505 KV808237.1 Protein Homology CDS 21876 22586 . - 0 ID=cds-OFJ78383.1;Parent=gene-HMPREF2844_06505;Dbxref=NCBI_GP:OFJ78383.1;Name=OFJ78383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269771.1;locus_tag=HMPREF2844_06505;product=type III-A CRISPR-associated RAMP protein Csm3;protein_id=OFJ78383.1;transl_table=11 KV808237.1 Genbank gene 22599 23039 . - . ID=gene-HMPREF2844_06510;Name=HMPREF2844_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06510 KV808237.1 GeneMarkS+ CDS 22599 23039 . - 0 ID=cds-OFJ78384.1;Parent=gene-HMPREF2844_06510;Dbxref=NCBI_GP:OFJ78384.1;Name=OFJ78384.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06510;product=hypothetical protein;protein_id=OFJ78384.1;transl_table=11 KV808237.1 Genbank gene 23042 25573 . - . ID=gene-HMPREF2844_06515;Name=HMPREF2844_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06515 KV808237.1 Protein Homology CDS 23042 25573 . - 0 ID=cds-OFJ78385.1;Parent=gene-HMPREF2844_06515;Dbxref=NCBI_GP:OFJ78385.1;Name=OFJ78385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269769.1;locus_tag=HMPREF2844_06515;product=type III-A CRISPR-associated protein Cas10/Csm1;protein_id=OFJ78385.1;transl_table=11 KV808237.1 Genbank gene 25935 26156 . + . ID=gene-HMPREF2844_06520;Name=HMPREF2844_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06520 KV808237.1 GeneMarkS+ CDS 25935 26156 . + 0 ID=cds-OFJ78386.1;Parent=gene-HMPREF2844_06520;Dbxref=NCBI_GP:OFJ78386.1;Name=OFJ78386.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06520;product=hypothetical protein;protein_id=OFJ78386.1;transl_table=11 KV808237.1 Genbank gene 26300 26390 . - . ID=gene-HMPREF2844_06525;Name=HMPREF2844_06525;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_06525 KV808237.1 tRNAscan-SE tRNA 26300 26390 . - . ID=rna-HMPREF2844_06525;Parent=gene-HMPREF2844_06525;anticodon=(pos:complement(26354..26356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_06525;product=tRNA-Ser KV808237.1 tRNAscan-SE exon 26300 26390 . - . ID=exon-HMPREF2844_06525-1;Parent=rna-HMPREF2844_06525;anticodon=(pos:complement(26354..26356));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_06525;product=tRNA-Ser KV808237.1 Genbank gene 26486 26572 . - . ID=gene-HMPREF2844_06530;Name=HMPREF2844_06530;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_06530 KV808237.1 tRNAscan-SE tRNA 26486 26572 . - . ID=rna-HMPREF2844_06530;Parent=gene-HMPREF2844_06530;anticodon=(pos:complement(26536..26538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_06530;product=tRNA-Leu KV808237.1 tRNAscan-SE exon 26486 26572 . - . ID=exon-HMPREF2844_06530-1;Parent=rna-HMPREF2844_06530;anticodon=(pos:complement(26536..26538));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_06530;product=tRNA-Leu KV808237.1 Genbank gene 26902 29412 . + . ID=gene-HMPREF2844_06535;Name=HMPREF2844_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06535 KV808237.1 Protein Homology CDS 26902 29412 . + 0 ID=cds-OFJ78338.1;Parent=gene-HMPREF2844_06535;Dbxref=NCBI_GP:OFJ78338.1;Name=OFJ78338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743078.1;locus_tag=HMPREF2844_06535;product=ribonuclease R;protein_id=OFJ78338.1;transl_table=11 KV808237.1 Genbank gene 29540 30100 . - . ID=gene-HMPREF2844_06540;Name=HMPREF2844_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06540 KV808237.1 Protein Homology CDS 29540 30100 . - 0 ID=cds-OFJ78339.1;Parent=gene-HMPREF2844_06540;Dbxref=NCBI_GP:OFJ78339.1;Name=OFJ78339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743076.1;locus_tag=HMPREF2844_06540;product=molybdenum cofactor guanylyltransferase;protein_id=OFJ78339.1;transl_table=11 KV808237.1 Genbank gene 30343 32148 . + . ID=gene-HMPREF2844_06545;Name=HMPREF2844_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06545 KV808237.1 Protein Homology CDS 30343 32148 . + 0 ID=cds-OFJ78340.1;Parent=gene-HMPREF2844_06545;Dbxref=NCBI_GP:OFJ78340.1;Name=OFJ78340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269765.1;locus_tag=HMPREF2844_06545;product=ATPase;protein_id=OFJ78340.1;transl_table=11 KV808237.1 Genbank gene 32145 32801 . + . ID=gene-HMPREF2844_06550;Name=HMPREF2844_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06550 KV808237.1 Protein Homology CDS 32145 32801 . + 0 ID=cds-OFJ78341.1;Parent=gene-HMPREF2844_06550;Dbxref=NCBI_GP:OFJ78341.1;Name=OFJ78341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680203.1;locus_tag=HMPREF2844_06550;product=DNA-binding response regulator;protein_id=OFJ78341.1;transl_table=11 KV808237.1 Genbank gene 33074 34876 . + . ID=gene-HMPREF2844_06555;Name=HMPREF2844_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06555 KV808237.1 Protein Homology CDS 33074 34876 . + 0 ID=cds-OFJ78342.1;Parent=gene-HMPREF2844_06555;Dbxref=NCBI_GP:OFJ78342.1;Name=OFJ78342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269763.1;locus_tag=HMPREF2844_06555;product=protein-disulfide reductase DsbD;protein_id=OFJ78342.1;transl_table=11 KV808237.1 Genbank gene 34979 35638 . + . ID=gene-HMPREF2844_06560;Name=HMPREF2844_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06560 KV808237.1 Protein Homology CDS 34979 35638 . + 0 ID=cds-OFJ78362.1;Parent=gene-HMPREF2844_06560;Dbxref=NCBI_GP:OFJ78362.1;Name=OFJ78362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683303.1;locus_tag=HMPREF2844_06560;product=uracil-DNA glycosylase;protein_id=OFJ78362.1;transl_table=11 KV808237.1 Genbank gene 35746 36243 . + . ID=gene-HMPREF2844_06565;Name=HMPREF2844_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06565 KV808237.1 Protein Homology CDS 35746 36243 . + 0 ID=cds-OFJ78343.1;Parent=gene-HMPREF2844_06565;Dbxref=NCBI_GP:OFJ78343.1;Name=OFJ78343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015674483.1;locus_tag=HMPREF2844_06565;product=phosphatidylethanolamine-binding protein;protein_id=OFJ78343.1;transl_table=11 KV808237.1 Genbank pseudogene 36464 37146 . - . ID=gene-HMPREF2844_06570;Name=HMPREF2844_06570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06570;pseudo=true KV808237.1 Protein Homology CDS 36464 37146 . - 0 ID=cds-HMPREF2844_06570;Parent=gene-HMPREF2844_06570;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270149.1;locus_tag=HMPREF2844_06570;product=outer membrane secretion protein;pseudo=true;transl_table=11 KV808237.1 Genbank gene 37366 38502 . + . ID=gene-HMPREF2844_06575;Name=HMPREF2844_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06575 KV808237.1 Protein Homology CDS 37366 38502 . + 0 ID=cds-OFJ78344.1;Parent=gene-HMPREF2844_06575;Dbxref=NCBI_GP:OFJ78344.1;Name=OFJ78344.1;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054862.1;locus_tag=HMPREF2844_06575;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=OFJ78344.1;transl_table=11 KV808237.1 Genbank gene 38511 39338 . + . ID=gene-HMPREF2844_06580;Name=HMPREF2844_06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06580 KV808237.1 Protein Homology CDS 38511 39338 . + 0 ID=cds-OFJ78345.1;Parent=gene-HMPREF2844_06580;Dbxref=NCBI_GP:OFJ78345.1;Name=OFJ78345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961786.1;locus_tag=HMPREF2844_06580;product=S-formylglutathione hydrolase;protein_id=OFJ78345.1;transl_table=11 KV808237.1 Genbank gene 39925 40434 . - . ID=gene-HMPREF2844_06585;Name=HMPREF2844_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06585 KV808237.1 Protein Homology CDS 39925 40434 . - 0 ID=cds-OFJ78346.1;Parent=gene-HMPREF2844_06585;Dbxref=NCBI_GP:OFJ78346.1;Name=OFJ78346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743061.1;locus_tag=HMPREF2844_06585;product=peptidylprolyl isomerase;protein_id=OFJ78346.1;transl_table=11 KV808237.1 Genbank gene 40544 41959 . - . ID=gene-HMPREF2844_06590;Name=HMPREF2844_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06590 KV808237.1 Protein Homology CDS 40544 41959 . - 0 ID=cds-OFJ78347.1;Parent=gene-HMPREF2844_06590;Dbxref=NCBI_GP:OFJ78347.1;Name=OFJ78347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449222.1;locus_tag=HMPREF2844_06590;product=anion:sodium symporter;protein_id=OFJ78347.1;transl_table=11 KV808237.1 Genbank gene 42318 43022 . + . ID=gene-HMPREF2844_06595;Name=HMPREF2844_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06595 KV808237.1 Protein Homology CDS 42318 43022 . + 0 ID=cds-OFJ78348.1;Parent=gene-HMPREF2844_06595;Dbxref=NCBI_GP:OFJ78348.1;Name=OFJ78348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525373.1;locus_tag=HMPREF2844_06595;product=hypothetical protein;protein_id=OFJ78348.1;transl_table=11 KV808237.1 Genbank gene 43019 43792 . + . ID=gene-HMPREF2844_06600;Name=HMPREF2844_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06600 KV808237.1 Protein Homology CDS 43019 43792 . + 0 ID=cds-OFJ78349.1;Parent=gene-HMPREF2844_06600;Dbxref=NCBI_GP:OFJ78349.1;Name=OFJ78349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270145.1;locus_tag=HMPREF2844_06600;product=3-dehydroquinase;protein_id=OFJ78349.1;transl_table=11 KV808237.1 Genbank gene 44061 45131 . - . ID=gene-HMPREF2844_06605;Name=HMPREF2844_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06605 KV808237.1 Protein Homology CDS 44061 45131 . - 0 ID=cds-OFJ78350.1;Parent=gene-HMPREF2844_06605;Dbxref=NCBI_GP:OFJ78350.1;Name=OFJ78350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010358669.1;locus_tag=HMPREF2844_06605;product=LPS export ABC transporter permease LptG;protein_id=OFJ78350.1;transl_table=11 KV808237.1 Genbank gene 45128 46243 . - . ID=gene-HMPREF2844_06610;Name=HMPREF2844_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06610 KV808237.1 Protein Homology CDS 45128 46243 . - 0 ID=cds-OFJ78351.1;Parent=gene-HMPREF2844_06610;Dbxref=NCBI_GP:OFJ78351.1;Name=OFJ78351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003697532.1;locus_tag=HMPREF2844_06610;product=LPS export ABC transporter permease LptF;protein_id=OFJ78351.1;transl_table=11 KV808237.1 Genbank gene 46412 47821 . + . ID=gene-HMPREF2844_06615;Name=HMPREF2844_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06615 KV808237.1 Protein Homology CDS 46412 47821 . + 0 ID=cds-OFJ78352.1;Parent=gene-HMPREF2844_06615;Dbxref=NCBI_GP:OFJ78352.1;Name=OFJ78352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270143.1;locus_tag=HMPREF2844_06615;product=aminopeptidase;protein_id=OFJ78352.1;transl_table=11 KV808237.1 Genbank gene 47929 48291 . - . ID=gene-HMPREF2844_06620;Name=HMPREF2844_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06620 KV808237.1 Protein Homology CDS 47929 48291 . - 0 ID=cds-OFJ78353.1;Parent=gene-HMPREF2844_06620;Dbxref=NCBI_GP:OFJ78353.1;Name=OFJ78353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778828.1;locus_tag=HMPREF2844_06620;product=hypothetical protein;protein_id=OFJ78353.1;transl_table=11 KV808237.1 Genbank gene 48452 48937 . + . ID=gene-HMPREF2844_06625;Name=HMPREF2844_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06625 KV808237.1 Protein Homology CDS 48452 48937 . + 0 ID=cds-OFJ78354.1;Parent=gene-HMPREF2844_06625;Dbxref=NCBI_GP:OFJ78354.1;Name=OFJ78354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519283.1;locus_tag=HMPREF2844_06625;product=cupin;protein_id=OFJ78354.1;transl_table=11 KV808237.1 Genbank gene 49155 49955 . + . ID=gene-HMPREF2844_06630;Name=HMPREF2844_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06630 KV808237.1 GeneMarkS+ CDS 49155 49955 . + 0 ID=cds-OFJ78355.1;Parent=gene-HMPREF2844_06630;Dbxref=NCBI_GP:OFJ78355.1;Name=OFJ78355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06630;product=hypothetical protein;protein_id=OFJ78355.1;transl_table=11 KV808237.1 Genbank gene 49948 50391 . + . ID=gene-HMPREF2844_06635;Name=HMPREF2844_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06635 KV808237.1 GeneMarkS+ CDS 49948 50391 . + 0 ID=cds-OFJ78356.1;Parent=gene-HMPREF2844_06635;Dbxref=NCBI_GP:OFJ78356.1;Name=OFJ78356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06635;product=hypothetical protein;protein_id=OFJ78356.1;transl_table=11 KV808237.1 Genbank gene 50510 50812 . - . ID=gene-HMPREF2844_06640;Name=HMPREF2844_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06640 KV808237.1 GeneMarkS+ CDS 50510 50812 . - 0 ID=cds-OFJ78357.1;Parent=gene-HMPREF2844_06640;Dbxref=NCBI_GP:OFJ78357.1;Name=OFJ78357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06640;product=hypothetical protein;protein_id=OFJ78357.1;transl_table=11 KV808237.1 Genbank gene 50871 53159 . + . ID=gene-HMPREF2844_06645;Name=HMPREF2844_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06645 KV808237.1 Protein Homology CDS 50871 53159 . + 0 ID=cds-OFJ78358.1;Parent=gene-HMPREF2844_06645;Dbxref=NCBI_GP:OFJ78358.1;Name=OFJ78358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686219.1;locus_tag=HMPREF2844_06645;product=ligand-gated channel;protein_id=OFJ78358.1;transl_table=11 KV808237.1 Genbank gene 53614 55524 . + . ID=gene-HMPREF2844_06650;Name=HMPREF2844_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06650 KV808237.1 Protein Homology CDS 53614 55524 . + 0 ID=cds-OFJ78359.1;Parent=gene-HMPREF2844_06650;Dbxref=NCBI_GP:OFJ78359.1;Name=OFJ78359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688094.1;locus_tag=HMPREF2844_06650;product=amylosucrase;protein_id=OFJ78359.1;transl_table=11 KV808237.1 Genbank gene 56107 56607 . + . ID=gene-HMPREF2844_06655;Name=HMPREF2844_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06655 KV808237.1 Protein Homology CDS 56107 56607 . + 0 ID=cds-OFJ78360.1;Parent=gene-HMPREF2844_06655;Dbxref=NCBI_GP:OFJ78360.1;Name=OFJ78360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685697.1;locus_tag=HMPREF2844_06655;product=hypothetical protein;protein_id=OFJ78360.1;transl_table=11 KV808237.1 Genbank gene 56735 57295 . + . ID=gene-HMPREF2844_06660;Name=HMPREF2844_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06660 KV808237.1 Protein Homology CDS 56735 57295 . + 0 ID=cds-OFJ78361.1;Parent=gene-HMPREF2844_06660;Dbxref=NCBI_GP:OFJ78361.1;Name=OFJ78361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580810.1;locus_tag=HMPREF2844_06660;product=hypothetical protein;protein_id=OFJ78361.1;transl_table=11 ##sequence-region KV808238.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808238.1 Genbank region 1 280 . + . ID=KV808238.1:1..280;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 ##sequence-region KV808239.1 1 1248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808239.1 Genbank region 1 1248 . + . ID=KV808239.1:1..1248;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808239.1 Genbank pseudogene 1 680 . - . ID=gene-HMPREF2844_06665;Name=HMPREF2844_06665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06665;pseudo=true KV808239.1 Protein Homology CDS 1 680 . - 0 ID=cds-HMPREF2844_06665;Parent=gene-HMPREF2844_06665;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520050.1;locus_tag=HMPREF2844_06665;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808240.1 1 14114 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808240.1 Genbank region 1 14114 . + . ID=KV808240.1:1..14114;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808240.1 Genbank gene 68 988 . - . ID=gene-HMPREF2844_06670;Name=HMPREF2844_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06670 KV808240.1 Protein Homology CDS 68 988 . - 0 ID=cds-OFJ78040.1;Parent=gene-HMPREF2844_06670;Dbxref=NCBI_GP:OFJ78040.1;Name=OFJ78040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687404.1;locus_tag=HMPREF2844_06670;product=hypothetical protein;protein_id=OFJ78040.1;transl_table=11 KV808240.1 Genbank gene 1575 2192 . + . ID=gene-HMPREF2844_06675;Name=HMPREF2844_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06675 KV808240.1 Protein Homology CDS 1575 2192 . + 0 ID=cds-OFJ78041.1;Parent=gene-HMPREF2844_06675;Dbxref=NCBI_GP:OFJ78041.1;Name=OFJ78041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687402.1;locus_tag=HMPREF2844_06675;product=N-(5'-phosphoribosyl)anthranilate isomerase;protein_id=OFJ78041.1;transl_table=11 KV808240.1 Genbank gene 2240 3142 . + . ID=gene-HMPREF2844_06680;Name=HMPREF2844_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06680 KV808240.1 Protein Homology CDS 2240 3142 . + 0 ID=cds-OFJ78042.1;Parent=gene-HMPREF2844_06680;Dbxref=NCBI_GP:OFJ78042.1;Name=OFJ78042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687401.1;locus_tag=HMPREF2844_06680;product=hypothetical protein;protein_id=OFJ78042.1;transl_table=11 KV808240.1 Genbank gene 3196 3789 . + . ID=gene-HMPREF2844_06685;Name=HMPREF2844_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06685 KV808240.1 Protein Homology CDS 3196 3789 . + 0 ID=cds-OFJ78043.1;Parent=gene-HMPREF2844_06685;Dbxref=NCBI_GP:OFJ78043.1;Name=OFJ78043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270348.1;locus_tag=HMPREF2844_06685;product=DNA glycosylase;protein_id=OFJ78043.1;transl_table=11 KV808240.1 Genbank gene 4074 5717 . - . ID=gene-HMPREF2844_06690;Name=HMPREF2844_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06690 KV808240.1 Protein Homology CDS 4074 5717 . - 0 ID=cds-OFJ78044.1;Parent=gene-HMPREF2844_06690;Dbxref=NCBI_GP:OFJ78044.1;Name=OFJ78044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312377.1;locus_tag=HMPREF2844_06690;product=glucose-6-phosphate isomerase;protein_id=OFJ78044.1;transl_table=11 KV808240.1 Genbank gene 6100 6948 . - . ID=gene-HMPREF2844_06695;Name=HMPREF2844_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06695 KV808240.1 Protein Homology CDS 6100 6948 . - 0 ID=cds-OFJ78026.1;Parent=gene-HMPREF2844_06695;Dbxref=NCBI_GP:OFJ78026.1;Name=OFJ78026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002239863.1;locus_tag=HMPREF2844_06695;product=transcriptional regulator;protein_id=OFJ78026.1;transl_table=11 KV808240.1 Genbank gene 6998 7999 . - . ID=gene-HMPREF2844_06700;Name=HMPREF2844_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06700 KV808240.1 Protein Homology CDS 6998 7999 . - 0 ID=cds-OFJ78027.1;Parent=gene-HMPREF2844_06700;Dbxref=NCBI_GP:OFJ78027.1;Name=OFJ78027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270345.1;locus_tag=HMPREF2844_06700;product=glucokinase;protein_id=OFJ78027.1;transl_table=11 KV808240.1 Genbank gene 7980 8675 . - . ID=gene-HMPREF2844_06705;Name=HMPREF2844_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06705 KV808240.1 Protein Homology CDS 7980 8675 . - 0 ID=cds-OFJ78028.1;Parent=gene-HMPREF2844_06705;Dbxref=NCBI_GP:OFJ78028.1;Name=OFJ78028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312375.1;locus_tag=HMPREF2844_06705;product=6-phosphogluconolactonase;protein_id=OFJ78028.1;transl_table=11 KV808240.1 Genbank gene 8891 10336 . - . ID=gene-HMPREF2844_06710;Name=HMPREF2844_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06710 KV808240.1 Protein Homology CDS 8891 10336 . - 0 ID=cds-OFJ78029.1;Parent=gene-HMPREF2844_06710;Dbxref=NCBI_GP:OFJ78029.1;Name=OFJ78029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220804.1;locus_tag=HMPREF2844_06710;product=glucose-6-phosphate dehydrogenase;protein_id=OFJ78029.1;transl_table=11 KV808240.1 Genbank gene 10800 12635 . + . ID=gene-HMPREF2844_06715;Name=HMPREF2844_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06715 KV808240.1 Protein Homology CDS 10800 12635 . + 0 ID=cds-OFJ78030.1;Parent=gene-HMPREF2844_06715;Dbxref=NCBI_GP:OFJ78030.1;Name=OFJ78030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273524.1;locus_tag=HMPREF2844_06715;product=phosphogluconate dehydratase;protein_id=OFJ78030.1;transl_table=11 KV808240.1 Genbank gene 13009 13647 . + . ID=gene-HMPREF2844_06720;Name=HMPREF2844_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06720 KV808240.1 Protein Homology CDS 13009 13647 . + 0 ID=cds-OFJ78031.1;Parent=gene-HMPREF2844_06720;Dbxref=NCBI_GP:OFJ78031.1;Name=OFJ78031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219106.1;locus_tag=HMPREF2844_06720;product=2-dehydro-3-deoxyphosphogluconate aldolase;protein_id=OFJ78031.1;transl_table=11 KV808240.1 Genbank pseudogene 13811 14114 . + . ID=gene-HMPREF2844_06725;Name=HMPREF2844_06725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06725;pseudo=true KV808240.1 Protein Homology CDS 13811 14114 . + 0 ID=cds-HMPREF2844_06725;Parent=gene-HMPREF2844_06725;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815312.1;locus_tag=HMPREF2844_06725;product=7-cyano-7-deazaguanine synthase;pseudo=true;transl_table=11 ##sequence-region KV808241.1 1 24859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808241.1 Genbank region 1 24859 . + . ID=KV808241.1:1..24859;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808241.1 Genbank pseudogene 1 509 . - . ID=gene-HMPREF2844_06730;Name=HMPREF2844_06730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06730;pseudo=true KV808241.1 GeneMarkS+ CDS 1 509 . - 0 ID=cds-HMPREF2844_06730;Parent=gene-HMPREF2844_06730;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_06730;product=hypothetical protein;pseudo=true;transl_table=11 KV808241.1 Genbank gene 1173 2105 . + . ID=gene-HMPREF2844_06735;Name=HMPREF2844_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06735 KV808241.1 Protein Homology CDS 1173 2105 . + 0 ID=cds-OFJ77923.1;Parent=gene-HMPREF2844_06735;Dbxref=NCBI_GP:OFJ77923.1;Name=OFJ77923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743784.1;locus_tag=HMPREF2844_06735;product=autotransporter;protein_id=OFJ77923.1;transl_table=11 KV808241.1 Genbank gene 2500 3783 . - . ID=gene-HMPREF2844_06740;Name=HMPREF2844_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06740 KV808241.1 Protein Homology CDS 2500 3783 . - 0 ID=cds-OFJ77924.1;Parent=gene-HMPREF2844_06740;Dbxref=NCBI_GP:OFJ77924.1;Name=OFJ77924.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519560.1;locus_tag=HMPREF2844_06740;product=glutamate-1-semialdehyde aminotransferase;protein_id=OFJ77924.1;transl_table=11 KV808241.1 Genbank gene 3997 4404 . + . ID=gene-HMPREF2844_06745;Name=HMPREF2844_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06745 KV808241.1 Protein Homology CDS 3997 4404 . + 0 ID=cds-OFJ77925.1;Parent=gene-HMPREF2844_06745;Dbxref=NCBI_GP:OFJ77925.1;Name=OFJ77925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743789.1;locus_tag=HMPREF2844_06745;product=hypothetical protein;protein_id=OFJ77925.1;transl_table=11 KV808241.1 Genbank gene 4606 5934 . + . ID=gene-HMPREF2844_06750;Name=HMPREF2844_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06750 KV808241.1 Protein Homology CDS 4606 5934 . + 0 ID=cds-OFJ77926.1;Parent=gene-HMPREF2844_06750;Dbxref=NCBI_GP:OFJ77926.1;Name=OFJ77926.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270969.1;locus_tag=HMPREF2844_06750;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB;protein_id=OFJ77926.1;transl_table=11 KV808241.1 Genbank gene 6172 8964 . - . ID=gene-HMPREF2844_06755;Name=HMPREF2844_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06755 KV808241.1 Protein Homology CDS 6172 8964 . - 0 ID=cds-OFJ77927.1;Parent=gene-HMPREF2844_06755;Dbxref=NCBI_GP:OFJ77927.1;Name=OFJ77927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747300.1;locus_tag=HMPREF2844_06755;product=isoleucine--tRNA ligase;protein_id=OFJ77927.1;transl_table=11 KV808241.1 Genbank gene 9339 9569 . + . ID=gene-HMPREF2844_06760;Name=HMPREF2844_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06760 KV808241.1 Protein Homology CDS 9339 9569 . + 0 ID=cds-OFJ77928.1;Parent=gene-HMPREF2844_06760;Dbxref=NCBI_GP:OFJ77928.1;Name=OFJ77928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743796.1;locus_tag=HMPREF2844_06760;product=hemin transporter;protein_id=OFJ77928.1;transl_table=11 KV808241.1 Genbank gene 9654 10442 . + . ID=gene-HMPREF2844_06765;Name=HMPREF2844_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06765 KV808241.1 Protein Homology CDS 9654 10442 . + 0 ID=cds-OFJ77929.1;Parent=gene-HMPREF2844_06765;Dbxref=NCBI_GP:OFJ77929.1;Name=OFJ77929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682038.1;locus_tag=HMPREF2844_06765;product=ABC transporter substrate-binding protein;protein_id=OFJ77929.1;transl_table=11 KV808241.1 Genbank gene 10671 11603 . + . ID=gene-HMPREF2844_06770;Name=HMPREF2844_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06770 KV808241.1 Protein Homology CDS 10671 11603 . + 0 ID=cds-OFJ77930.1;Parent=gene-HMPREF2844_06770;Dbxref=NCBI_GP:OFJ77930.1;Name=OFJ77930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746703.1;locus_tag=HMPREF2844_06770;product=ABC transporter permease;protein_id=OFJ77930.1;transl_table=11 KV808241.1 Genbank gene 11605 12348 . + . ID=gene-HMPREF2844_06775;Name=HMPREF2844_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06775 KV808241.1 Protein Homology CDS 11605 12348 . + 0 ID=cds-OFJ77931.1;Parent=gene-HMPREF2844_06775;Dbxref=NCBI_GP:OFJ77931.1;Name=OFJ77931.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270973.1;locus_tag=HMPREF2844_06775;product=iron dicitrate transporter;protein_id=OFJ77931.1;transl_table=11 KV808241.1 Genbank gene 12460 12978 . - . ID=gene-HMPREF2844_06780;Name=HMPREF2844_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06780 KV808241.1 Protein Homology CDS 12460 12978 . - 0 ID=cds-OFJ77932.1;Parent=gene-HMPREF2844_06780;Dbxref=NCBI_GP:OFJ77932.1;Name=OFJ77932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312795.1;locus_tag=HMPREF2844_06780;product=gluconokinase;protein_id=OFJ77932.1;transl_table=11 KV808241.1 Genbank gene 13213 14598 . - . ID=gene-HMPREF2844_06785;Name=HMPREF2844_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06785 KV808241.1 Protein Homology CDS 13213 14598 . - 0 ID=cds-OFJ77933.1;Parent=gene-HMPREF2844_06785;Dbxref=NCBI_GP:OFJ77933.1;Name=OFJ77933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763392.1;locus_tag=HMPREF2844_06785;product=permease;protein_id=OFJ77933.1;transl_table=11 KV808241.1 Genbank gene 15097 15411 . - . ID=gene-HMPREF2844_06790;Name=HMPREF2844_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06790 KV808241.1 Protein Homology CDS 15097 15411 . - 0 ID=cds-OFJ77934.1;Parent=gene-HMPREF2844_06790;Dbxref=NCBI_GP:OFJ77934.1;Name=OFJ77934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686594.1;locus_tag=HMPREF2844_06790;product=RNA polymerase subunit sigma-54;protein_id=OFJ77934.1;transl_table=11 KV808241.1 Genbank gene 15478 16830 . - . ID=gene-HMPREF2844_06795;Name=HMPREF2844_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06795 KV808241.1 Protein Homology CDS 15478 16830 . - 0 ID=cds-OFJ77935.1;Parent=gene-HMPREF2844_06795;Dbxref=NCBI_GP:OFJ77935.1;Name=OFJ77935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748341.1;locus_tag=HMPREF2844_06795;product=RNA polymerase sigma-54 factor;protein_id=OFJ77935.1;transl_table=11 KV808241.1 Genbank gene 17075 17809 . - . ID=gene-HMPREF2844_06800;Name=HMPREF2844_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06800 KV808241.1 Protein Homology CDS 17075 17809 . - 0 ID=cds-OFJ77936.1;Parent=gene-HMPREF2844_06800;Dbxref=NCBI_GP:OFJ77936.1;Name=OFJ77936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757055.1;locus_tag=HMPREF2844_06800;product=ABC transporter ATP-binding protein;protein_id=OFJ77936.1;transl_table=11 KV808241.1 Genbank gene 17902 18432 . - . ID=gene-HMPREF2844_06805;Name=HMPREF2844_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06805 KV808241.1 Protein Homology CDS 17902 18432 . - 0 ID=cds-OFJ77937.1;Parent=gene-HMPREF2844_06805;Dbxref=NCBI_GP:OFJ77937.1;Name=OFJ77937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212427.1;locus_tag=HMPREF2844_06805;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=OFJ77937.1;transl_table=11 KV808241.1 Genbank gene 18413 18994 . - . ID=gene-HMPREF2844_06810;Name=HMPREF2844_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06810 KV808241.1 Protein Homology CDS 18413 18994 . - 0 ID=cds-OFJ77938.1;Parent=gene-HMPREF2844_06810;Dbxref=NCBI_GP:OFJ77938.1;Name=OFJ77938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212426.1;locus_tag=HMPREF2844_06810;product=LPS export ABC transporter periplasmic protein LptC;protein_id=OFJ77938.1;transl_table=11 KV808241.1 Genbank gene 18991 19527 . - . ID=gene-HMPREF2844_06815;Name=HMPREF2844_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06815 KV808241.1 Protein Homology CDS 18991 19527 . - 0 ID=cds-OFJ77939.1;Parent=gene-HMPREF2844_06815;Dbxref=NCBI_GP:OFJ77939.1;Name=OFJ77939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581333.1;locus_tag=HMPREF2844_06815;product=phenylphosphate carboxylase subunit delta;protein_id=OFJ77939.1;transl_table=11 KV808241.1 Genbank gene 19772 20710 . - . ID=gene-HMPREF2844_06820;Name=HMPREF2844_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06820 KV808241.1 Protein Homology CDS 19772 20710 . - 0 ID=cds-OFJ77940.1;Parent=gene-HMPREF2844_06820;Dbxref=NCBI_GP:OFJ77940.1;Name=OFJ77940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761385.1;locus_tag=HMPREF2844_06820;product=LysR family transcriptional regulator;protein_id=OFJ77940.1;transl_table=11 KV808241.1 Genbank gene 20941 21690 . + . ID=gene-HMPREF2844_06825;Name=HMPREF2844_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06825 KV808241.1 Protein Homology CDS 20941 21690 . + 0 ID=cds-OFJ77941.1;Parent=gene-HMPREF2844_06825;Dbxref=NCBI_GP:OFJ77941.1;Name=OFJ77941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JXG9.1;locus_tag=HMPREF2844_06825;product=Nif3-like dinuclear metal center hexameric protein;protein_id=OFJ77941.1;transl_table=11 KV808241.1 Genbank gene 21813 22394 . + . ID=gene-HMPREF2844_06830;Name=HMPREF2844_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06830 KV808241.1 Protein Homology CDS 21813 22394 . + 0 ID=cds-OFJ77942.1;Parent=gene-HMPREF2844_06830;Dbxref=NCBI_GP:OFJ77942.1;Name=OFJ77942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273542.1;locus_tag=HMPREF2844_06830;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=OFJ77942.1;transl_table=11 KV808241.1 Genbank gene 22413 23936 . + . ID=gene-HMPREF2844_06835;Name=HMPREF2844_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06835 KV808241.1 Protein Homology CDS 22413 23936 . + 0 ID=cds-OFJ77943.1;Parent=gene-HMPREF2844_06835;Dbxref=NCBI_GP:OFJ77943.1;Name=OFJ77943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218185.1;locus_tag=HMPREF2844_06835;product=cytochrome B;protein_id=OFJ77943.1;transl_table=11 KV808241.1 Genbank gene 23936 24736 . + . ID=gene-HMPREF2844_06840;Name=HMPREF2844_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06840 KV808241.1 Protein Homology CDS 23936 24736 . + 0 ID=cds-OFJ77944.1;Parent=gene-HMPREF2844_06840;Dbxref=NCBI_GP:OFJ77944.1;Name=OFJ77944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743826.1;locus_tag=HMPREF2844_06840;product=cytochrome C;protein_id=OFJ77944.1;transl_table=11 ##sequence-region KV808242.1 1 223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808242.1 Genbank region 1 223 . + . ID=KV808242.1:1..223;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 ##sequence-region KV808243.1 1 140338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808243.1 Genbank region 1 140338 . + . ID=KV808243.1:1..140338;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808243.1 Genbank gene 65 2818 . - . ID=gene-HMPREF2844_06845;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF2844_06845 KV808243.1 Protein Homology CDS 65 2818 . - 0 ID=cds-OFJ77810.1;Parent=gene-HMPREF2844_06845;Dbxref=NCBI_GP:OFJ77810.1;Name=OFJ77810.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679319.1;locus_tag=HMPREF2844_06845;product=preprotein translocase subunit SecA;protein_id=OFJ77810.1;transl_table=11 KV808243.1 Genbank gene 2976 3398 . + . ID=gene-HMPREF2844_06850;Name=HMPREF2844_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06850 KV808243.1 Protein Homology CDS 2976 3398 . + 0 ID=cds-OFJ77811.1;Parent=gene-HMPREF2844_06850;Dbxref=NCBI_GP:OFJ77811.1;Name=OFJ77811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776918.1;locus_tag=HMPREF2844_06850;product=hypothetical protein;protein_id=OFJ77811.1;transl_table=11 KV808243.1 Genbank gene 3689 4273 . + . ID=gene-HMPREF2844_06855;Name=HMPREF2844_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06855 KV808243.1 Protein Homology CDS 3689 4273 . + 0 ID=cds-OFJ77812.1;Parent=gene-HMPREF2844_06855;Dbxref=NCBI_GP:OFJ77812.1;Name=OFJ77812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684449.1;locus_tag=HMPREF2844_06855;product=azurin;protein_id=OFJ77812.1;transl_table=11 KV808243.1 Genbank gene 4369 4878 . + . ID=gene-HMPREF2844_06860;Name=HMPREF2844_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06860 KV808243.1 Protein Homology CDS 4369 4878 . + 0 ID=cds-OFJ77813.1;Parent=gene-HMPREF2844_06860;Dbxref=NCBI_GP:OFJ77813.1;Name=OFJ77813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002258286.1;locus_tag=HMPREF2844_06860;product=cation-binding protein;protein_id=OFJ77813.1;transl_table=11 KV808243.1 Genbank gene 4998 5618 . + . ID=gene-HMPREF2844_06865;Name=HMPREF2844_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06865 KV808243.1 Protein Homology CDS 4998 5618 . + 0 ID=cds-OFJ77814.1;Parent=gene-HMPREF2844_06865;Dbxref=NCBI_GP:OFJ77814.1;Name=OFJ77814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688014.1;locus_tag=HMPREF2844_06865;product=diadenosine tetraphosphatase;protein_id=OFJ77814.1;transl_table=11 KV808243.1 Genbank gene 5819 6430 . + . ID=gene-HMPREF2844_06870;Name=HMPREF2844_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06870 KV808243.1 Protein Homology CDS 5819 6430 . + 0 ID=cds-OFJ77815.1;Parent=gene-HMPREF2844_06870;Dbxref=NCBI_GP:OFJ77815.1;Name=OFJ77815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683204.1;locus_tag=HMPREF2844_06870;product=segregation and condensation protein B;protein_id=OFJ77815.1;transl_table=11 KV808243.1 Genbank gene 6897 8156 . - . ID=gene-HMPREF2844_06875;Name=HMPREF2844_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06875 KV808243.1 Protein Homology CDS 6897 8156 . - 0 ID=cds-OFJ77816.1;Parent=gene-HMPREF2844_06875;Dbxref=NCBI_GP:OFJ77816.1;Name=OFJ77816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681052.1;locus_tag=HMPREF2844_06875;product=SAM-dependent methyltransferase;protein_id=OFJ77816.1;transl_table=11 KV808243.1 Genbank gene 8245 9219 . - . ID=gene-HMPREF2844_06880;Name=HMPREF2844_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06880 KV808243.1 Protein Homology CDS 8245 9219 . - 0 ID=cds-OFJ77817.1;Parent=gene-HMPREF2844_06880;Dbxref=NCBI_GP:OFJ77817.1;Name=OFJ77817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245862.1;locus_tag=HMPREF2844_06880;product=D-arabinose 5-phosphate isomerase;protein_id=OFJ77817.1;transl_table=11 KV808243.1 Genbank gene 9355 10410 . + . ID=gene-HMPREF2844_06885;Name=HMPREF2844_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06885 KV808243.1 Protein Homology CDS 9355 10410 . + 0 ID=cds-OFJ77818.1;Parent=gene-HMPREF2844_06885;Dbxref=NCBI_GP:OFJ77818.1;Name=OFJ77818.1;Note=catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K139.1;locus_tag=HMPREF2844_06885;product=transaldolase;protein_id=OFJ77818.1;transl_table=11 KV808243.1 Genbank gene 10675 11505 . - . ID=gene-HMPREF2844_06890;Name=HMPREF2844_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06890 KV808243.1 Protein Homology CDS 10675 11505 . - 0 ID=cds-OFJ77747.1;Parent=gene-HMPREF2844_06890;Dbxref=NCBI_GP:OFJ77747.1;Name=OFJ77747.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519496.1;locus_tag=HMPREF2844_06890;product=diadenosine tetraphosphatase;protein_id=OFJ77747.1;transl_table=11 KV808243.1 Genbank gene 11585 11974 . - . ID=gene-HMPREF2844_06895;Name=HMPREF2844_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06895 KV808243.1 Protein Homology CDS 11585 11974 . - 0 ID=cds-OFJ77748.1;Parent=gene-HMPREF2844_06895;Dbxref=NCBI_GP:OFJ77748.1;Name=OFJ77748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754044.1;locus_tag=HMPREF2844_06895;product=reactive intermediate/imine deaminase;protein_id=OFJ77748.1;transl_table=11 KV808243.1 Genbank gene 12153 13328 . - . ID=gene-HMPREF2844_06900;Name=HMPREF2844_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06900 KV808243.1 Protein Homology CDS 12153 13328 . - 0 ID=cds-OFJ77749.1;Parent=gene-HMPREF2844_06900;Dbxref=NCBI_GP:OFJ77749.1;Name=OFJ77749.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746998.1;locus_tag=HMPREF2844_06900;product=YggW family oxidoreductase;protein_id=OFJ77749.1;transl_table=11 KV808243.1 Genbank gene 13387 13980 . - . ID=gene-HMPREF2844_06905;Name=HMPREF2844_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06905 KV808243.1 Protein Homology CDS 13387 13980 . - 0 ID=cds-OFJ77750.1;Parent=gene-HMPREF2844_06905;Dbxref=NCBI_GP:OFJ77750.1;Name=OFJ77750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756980.1;locus_tag=HMPREF2844_06905;product=non-canonical purine NTP pyrophosphatase;protein_id=OFJ77750.1;transl_table=11 KV808243.1 Genbank gene 13990 14220 . - . ID=gene-HMPREF2844_06910;Name=HMPREF2844_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06910 KV808243.1 Protein Homology CDS 13990 14220 . - 0 ID=cds-OFJ77751.1;Parent=gene-HMPREF2844_06910;Dbxref=NCBI_GP:OFJ77751.1;Name=OFJ77751.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741840.1;locus_tag=HMPREF2844_06910;product=hypothetical protein;protein_id=OFJ77751.1;transl_table=11 KV808243.1 Genbank gene 14355 14591 . - . ID=gene-HMPREF2844_06915;Name=HMPREF2844_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06915 KV808243.1 Protein Homology CDS 14355 14591 . - 0 ID=cds-OFJ77752.1;Parent=gene-HMPREF2844_06915;Dbxref=NCBI_GP:OFJ77752.1;Name=OFJ77752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741839.1;locus_tag=HMPREF2844_06915;product=hypothetical protein;protein_id=OFJ77752.1;transl_table=11 KV808243.1 Genbank gene 14704 15336 . - . ID=gene-HMPREF2844_06920;Name=HMPREF2844_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06920 KV808243.1 Protein Homology CDS 14704 15336 . - 0 ID=cds-OFJ77753.1;Parent=gene-HMPREF2844_06920;Dbxref=NCBI_GP:OFJ77753.1;Name=OFJ77753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749398.1;locus_tag=HMPREF2844_06920;product=hypothetical protein;protein_id=OFJ77753.1;transl_table=11 KV808243.1 Genbank gene 15491 15721 . - . ID=gene-HMPREF2844_06925;Name=HMPREF2844_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06925 KV808243.1 Protein Homology CDS 15491 15721 . - 0 ID=cds-OFJ77754.1;Parent=gene-HMPREF2844_06925;Dbxref=NCBI_GP:OFJ77754.1;Name=OFJ77754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679018.1;locus_tag=HMPREF2844_06925;product=hypothetical protein;protein_id=OFJ77754.1;transl_table=11 KV808243.1 Genbank gene 16007 16984 . + . ID=gene-HMPREF2844_06930;Name=HMPREF2844_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06930 KV808243.1 Protein Homology CDS 16007 16984 . + 0 ID=cds-OFJ77755.1;Parent=gene-HMPREF2844_06930;Dbxref=NCBI_GP:OFJ77755.1;Name=OFJ77755.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283693.1;locus_tag=HMPREF2844_06930;product=DNA polymerase III subunit delta';protein_id=OFJ77755.1;transl_table=11 KV808243.1 Genbank gene 17004 17360 . + . ID=gene-HMPREF2844_06935;Name=HMPREF2844_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06935 KV808243.1 Protein Homology CDS 17004 17360 . + 0 ID=cds-OFJ77756.1;Parent=gene-HMPREF2844_06935;Dbxref=NCBI_GP:OFJ77756.1;Name=OFJ77756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760734.1;locus_tag=HMPREF2844_06935;product=pilus assembly protein;protein_id=OFJ77756.1;transl_table=11 KV808243.1 Genbank gene 17365 18141 . + . ID=gene-HMPREF2844_06940;Name=HMPREF2844_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06940 KV808243.1 Protein Homology CDS 17365 18141 . + 0 ID=cds-OFJ77757.1;Parent=gene-HMPREF2844_06940;Dbxref=NCBI_GP:OFJ77757.1;Name=OFJ77757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688002.1;locus_tag=HMPREF2844_06940;product=DNAase;protein_id=OFJ77757.1;transl_table=11 KV808243.1 Genbank gene 18213 18824 . - . ID=gene-HMPREF2844_06945;Name=HMPREF2844_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06945 KV808243.1 Protein Homology CDS 18213 18824 . - 0 ID=cds-OFJ77782.1;Parent=gene-HMPREF2844_06945;Dbxref=NCBI_GP:OFJ77782.1;Name=OFJ77782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227524.1;locus_tag=HMPREF2844_06945;product=cryptic protein cnp1;protein_id=OFJ77782.1;transl_table=11 KV808243.1 Genbank gene 18933 19157 . + . ID=gene-HMPREF2844_06950;Name=HMPREF2844_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06950 KV808243.1 Protein Homology CDS 18933 19157 . + 0 ID=cds-OFJ77758.1;Parent=gene-HMPREF2844_06950;Dbxref=NCBI_GP:OFJ77758.1;Name=OFJ77758.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214174.1;locus_tag=HMPREF2844_06950;product=hypothetical protein;protein_id=OFJ77758.1;transl_table=11 KV808243.1 Genbank gene 19171 19773 . + . ID=gene-HMPREF2844_06955;Name=HMPREF2844_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06955 KV808243.1 Protein Homology CDS 19171 19773 . + 0 ID=cds-OFJ77759.1;Parent=gene-HMPREF2844_06955;Dbxref=NCBI_GP:OFJ77759.1;Name=OFJ77759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270295.1;locus_tag=HMPREF2844_06955;product=hypothetical protein;protein_id=OFJ77759.1;transl_table=11 KV808243.1 Genbank gene 19844 20878 . + . ID=gene-HMPREF2844_06960;Name=HMPREF2844_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06960 KV808243.1 Protein Homology CDS 19844 20878 . + 0 ID=cds-OFJ77760.1;Parent=gene-HMPREF2844_06960;Dbxref=NCBI_GP:OFJ77760.1;Name=OFJ77760.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687600.1;locus_tag=HMPREF2844_06960;product=dihydroorotase;protein_id=OFJ77760.1;transl_table=11 KV808243.1 Genbank pseudogene 21198 21746 . - . ID=gene-HMPREF2844_06965;Name=HMPREF2844_06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_06965;pseudo=true KV808243.1 Protein Homology CDS 21198 21746 . - 0 ID=cds-HMPREF2844_06965;Parent=gene-HMPREF2844_06965;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270297.1;locus_tag=HMPREF2844_06965;product=hypothetical protein;pseudo=true;transl_table=11 KV808243.1 Genbank gene 22208 26104 . - . ID=gene-HMPREF2844_06970;Name=HMPREF2844_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06970 KV808243.1 Protein Homology CDS 22208 26104 . - 0 ID=cds-OFJ77761.1;Parent=gene-HMPREF2844_06970;Dbxref=NCBI_GP:OFJ77761.1;Name=OFJ77761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002235254.1;locus_tag=HMPREF2844_06970;product=phosphoribosylformylglycinamidine synthase;protein_id=OFJ77761.1;transl_table=11 KV808243.1 Genbank gene 26561 26899 . + . ID=gene-HMPREF2844_06975;Name=HMPREF2844_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06975 KV808243.1 Protein Homology CDS 26561 26899 . + 0 ID=cds-OFJ77762.1;Parent=gene-HMPREF2844_06975;Dbxref=NCBI_GP:OFJ77762.1;Name=OFJ77762.1;Note=indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271856.1;locus_tag=HMPREF2844_06975;product=transcriptional regulator;protein_id=OFJ77762.1;transl_table=11 KV808243.1 Genbank gene 27070 28449 . + . ID=gene-HMPREF2844_06980;Name=HMPREF2844_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06980 KV808243.1 Protein Homology CDS 27070 28449 . + 0 ID=cds-OFJ77763.1;Parent=gene-HMPREF2844_06980;Dbxref=NCBI_GP:OFJ77763.1;Name=OFJ77763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256528.1;locus_tag=HMPREF2844_06980;product=multidrug efflux MATE transporter NorM;protein_id=OFJ77763.1;transl_table=11 KV808243.1 Genbank gene 28525 29565 . + . ID=gene-HMPREF2844_06985;Name=HMPREF2844_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06985 KV808243.1 Protein Homology CDS 28525 29565 . + 0 ID=cds-OFJ77764.1;Parent=gene-HMPREF2844_06985;Dbxref=NCBI_GP:OFJ77764.1;Name=OFJ77764.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271933.1;locus_tag=HMPREF2844_06985;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=OFJ77764.1;transl_table=11 KV808243.1 Genbank gene 29577 30239 . + . ID=gene-HMPREF2844_06990;Name=HMPREF2844_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06990 KV808243.1 Protein Homology CDS 29577 30239 . + 0 ID=cds-OFJ77765.1;Parent=gene-HMPREF2844_06990;Dbxref=NCBI_GP:OFJ77765.1;Name=OFJ77765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741815.1;locus_tag=HMPREF2844_06990;product=TetR family transcriptional regulator;protein_id=OFJ77765.1;transl_table=11 KV808243.1 Genbank gene 30361 31212 . + . ID=gene-HMPREF2844_06995;Name=HMPREF2844_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_06995 KV808243.1 Protein Homology CDS 30361 31212 . + 0 ID=cds-OFJ77766.1;Parent=gene-HMPREF2844_06995;Dbxref=NCBI_GP:OFJ77766.1;Name=OFJ77766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234768.1;locus_tag=HMPREF2844_06995;product=diaminopimelate epimerase;protein_id=OFJ77766.1;transl_table=11 KV808243.1 Genbank gene 31209 31817 . + . ID=gene-HMPREF2844_07000;Name=HMPREF2844_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07000 KV808243.1 Protein Homology CDS 31209 31817 . + 0 ID=cds-OFJ77767.1;Parent=gene-HMPREF2844_07000;Dbxref=NCBI_GP:OFJ77767.1;Name=OFJ77767.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755572.1;locus_tag=HMPREF2844_07000;product=hypothetical protein;protein_id=OFJ77767.1;transl_table=11 KV808243.1 Genbank gene 31944 32876 . + . ID=gene-HMPREF2844_07005;Name=HMPREF2844_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07005 KV808243.1 Protein Homology CDS 31944 32876 . + 0 ID=cds-OFJ77768.1;Parent=gene-HMPREF2844_07005;Dbxref=NCBI_GP:OFJ77768.1;Name=OFJ77768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687742.1;locus_tag=HMPREF2844_07005;product=cysteine synthase A;protein_id=OFJ77768.1;transl_table=11 KV808243.1 Genbank gene 33087 33599 . + . ID=gene-HMPREF2844_07010;Name=HMPREF2844_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07010 KV808243.1 Protein Homology CDS 33087 33599 . + 0 ID=cds-OFJ77769.1;Parent=gene-HMPREF2844_07010;Dbxref=NCBI_GP:OFJ77769.1;Name=OFJ77769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010358754.1;locus_tag=HMPREF2844_07010;product=prokaryotic membrane lipolipid attachment site family protein;protein_id=OFJ77769.1;transl_table=11 KV808243.1 Genbank gene 33667 34065 . - . ID=gene-HMPREF2844_07015;Name=HMPREF2844_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07015 KV808243.1 Protein Homology CDS 33667 34065 . - 0 ID=cds-OFJ77770.1;Parent=gene-HMPREF2844_07015;Dbxref=NCBI_GP:OFJ77770.1;Name=OFJ77770.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766569.1;locus_tag=HMPREF2844_07015;product=DNA-binding protein;protein_id=OFJ77770.1;transl_table=11 KV808243.1 Genbank gene 34361 34930 . + . ID=gene-HMPREF2844_07020;Name=HMPREF2844_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07020 KV808243.1 Protein Homology CDS 34361 34930 . + 0 ID=cds-OFJ77771.1;Parent=gene-HMPREF2844_07020;Dbxref=NCBI_GP:OFJ77771.1;Name=OFJ77771.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547254.1;locus_tag=HMPREF2844_07020;product=superoxide dismutase;protein_id=OFJ77771.1;transl_table=11 KV808243.1 Genbank gene 35575 35952 . + . ID=gene-HMPREF2844_07025;Name=HMPREF2844_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07025 KV808243.1 Protein Homology CDS 35575 35952 . + 0 ID=cds-OFJ77772.1;Parent=gene-HMPREF2844_07025;Dbxref=NCBI_GP:OFJ77772.1;Name=OFJ77772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675077.1;locus_tag=HMPREF2844_07025;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=OFJ77772.1;transl_table=11 KV808243.1 Genbank gene 35946 36287 . + . ID=gene-HMPREF2844_07030;Name=HMPREF2844_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07030 KV808243.1 Protein Homology CDS 35946 36287 . + 0 ID=cds-OFJ77773.1;Parent=gene-HMPREF2844_07030;Dbxref=NCBI_GP:OFJ77773.1;Name=OFJ77773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272849.1;locus_tag=HMPREF2844_07030;product=succinate dehydrogenase;protein_id=OFJ77773.1;transl_table=11 KV808243.1 Genbank gene 36290 38053 . + . ID=gene-HMPREF2844_07035;Name=HMPREF2844_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07035 KV808243.1 Protein Homology CDS 36290 38053 . + 0 ID=cds-OFJ77774.1;Parent=gene-HMPREF2844_07035;Dbxref=NCBI_GP:OFJ77774.1;Name=OFJ77774.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009118267.1;locus_tag=HMPREF2844_07035;product=succinate dehydrogenase flavoprotein subunit;protein_id=OFJ77774.1;transl_table=11 KV808243.1 Genbank gene 38178 38885 . + . ID=gene-HMPREF2844_07040;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=HMPREF2844_07040 KV808243.1 Protein Homology CDS 38178 38885 . + 0 ID=cds-OFJ77775.1;Parent=gene-HMPREF2844_07040;Dbxref=NCBI_GP:OFJ77775.1;Name=OFJ77775.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002253935.1;locus_tag=HMPREF2844_07040;product=succinate dehydrogenase iron-sulfur subunit;protein_id=OFJ77775.1;transl_table=11 KV808243.1 Genbank gene 38889 39137 . + . ID=gene-HMPREF2844_07045;Name=HMPREF2844_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07045 KV808243.1 Protein Homology CDS 38889 39137 . + 0 ID=cds-OFJ77776.1;Parent=gene-HMPREF2844_07045;Dbxref=NCBI_GP:OFJ77776.1;Name=OFJ77776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675083.1;locus_tag=HMPREF2844_07045;product=hypothetical protein;protein_id=OFJ77776.1;transl_table=11 KV808243.1 Genbank gene 39255 40538 . + . ID=gene-HMPREF2844_07050;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=HMPREF2844_07050 KV808243.1 Protein Homology CDS 39255 40538 . + 0 ID=cds-OFJ77777.1;Parent=gene-HMPREF2844_07050;Dbxref=NCBI_GP:OFJ77777.1;Name=OFJ77777.1;Note=type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH;gbkey=CDS;gene=gltA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116987.1;locus_tag=HMPREF2844_07050;product=citrate (Si)-synthase;protein_id=OFJ77777.1;transl_table=11 KV808243.1 Genbank gene 40746 43574 . + . ID=gene-HMPREF2844_07055;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=HMPREF2844_07055 KV808243.1 Protein Homology CDS 40746 43574 . + 0 ID=cds-OFJ77778.1;Parent=gene-HMPREF2844_07055;Dbxref=NCBI_GP:OFJ77778.1;Name=OFJ77778.1;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;gbkey=CDS;gene=sucA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581109.1;locus_tag=HMPREF2844_07055;product=2-oxoglutarate dehydrogenase subunit E1;protein_id=OFJ77778.1;transl_table=11 KV808243.1 Genbank gene 43687 44862 . + . ID=gene-HMPREF2844_07060;Name=HMPREF2844_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07060 KV808243.1 Protein Homology CDS 43687 44862 . + 0 ID=cds-OFJ77779.1;Parent=gene-HMPREF2844_07060;Dbxref=NCBI_GP:OFJ77779.1;Name=OFJ77779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686085.1;locus_tag=HMPREF2844_07060;product=dihydrolipoamide succinyltransferase;protein_id=OFJ77779.1;transl_table=11 KV808243.1 Genbank gene 45057 45326 . + . ID=gene-HMPREF2844_07065;Name=HMPREF2844_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07065 KV808243.1 Protein Homology CDS 45057 45326 . + 0 ID=cds-OFJ77780.1;Parent=gene-HMPREF2844_07065;Dbxref=NCBI_GP:OFJ77780.1;Name=OFJ77780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766565.1;locus_tag=HMPREF2844_07065;product=hypothetical protein;protein_id=OFJ77780.1;transl_table=11 KV808243.1 Genbank gene 45522 46955 . + . ID=gene-HMPREF2844_07070;Name=HMPREF2844_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07070 KV808243.1 Protein Homology CDS 45522 46955 . + 0 ID=cds-OFJ77781.1;Parent=gene-HMPREF2844_07070;Dbxref=NCBI_GP:OFJ77781.1;Name=OFJ77781.1;Note=Catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745605.1;locus_tag=HMPREF2844_07070;product=dihydrolipoyl dehydrogenase;protein_id=OFJ77781.1;transl_table=11 KV808243.1 Genbank gene 47288 47575 . + . ID=gene-HMPREF2844_07075;Name=HMPREF2844_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07075 KV808243.1 Protein Homology CDS 47288 47575 . + 0 ID=cds-OFJ77735.1;Parent=gene-HMPREF2844_07075;Dbxref=NCBI_GP:OFJ77735.1;Name=OFJ77735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753423.1;locus_tag=HMPREF2844_07075;product=hypothetical protein;protein_id=OFJ77735.1;transl_table=11 KV808243.1 Genbank gene 47674 48840 . + . ID=gene-HMPREF2844_07080;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=HMPREF2844_07080 KV808243.1 Protein Homology CDS 47674 48840 . + 0 ID=cds-OFJ77736.1;Parent=gene-HMPREF2844_07080;Dbxref=NCBI_GP:OFJ77736.1;Name=OFJ77736.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686088.1;locus_tag=HMPREF2844_07080;product=succinate--CoA ligase subunit beta;protein_id=OFJ77736.1;transl_table=11 KV808243.1 Genbank gene 48851 49741 . + . ID=gene-HMPREF2844_07085;Name=HMPREF2844_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07085 KV808243.1 Protein Homology CDS 48851 49741 . + 0 ID=cds-OFJ77737.1;Parent=gene-HMPREF2844_07085;Dbxref=NCBI_GP:OFJ77737.1;Name=OFJ77737.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016655272.1;locus_tag=HMPREF2844_07085;product=succinate--CoA ligase subunit alpha;protein_id=OFJ77737.1;transl_table=11 KV808243.1 Genbank gene 49954 50388 . + . ID=gene-HMPREF2844_07090;Name=HMPREF2844_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07090 KV808243.1 Protein Homology CDS 49954 50388 . + 0 ID=cds-OFJ77738.1;Parent=gene-HMPREF2844_07090;Dbxref=NCBI_GP:OFJ77738.1;Name=OFJ77738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686098.1;locus_tag=HMPREF2844_07090;product=ElaB protein;protein_id=OFJ77738.1;transl_table=11 KV808243.1 Genbank gene 50530 50928 . + . ID=gene-HMPREF2844_07095;Name=HMPREF2844_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07095 KV808243.1 Protein Homology CDS 50530 50928 . + 0 ID=cds-OFJ77739.1;Parent=gene-HMPREF2844_07095;Dbxref=NCBI_GP:OFJ77739.1;Name=OFJ77739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764331.1;locus_tag=HMPREF2844_07095;product=hypothetical protein;protein_id=OFJ77739.1;transl_table=11 KV808243.1 Genbank gene 50921 51190 . + . ID=gene-HMPREF2844_07100;Name=HMPREF2844_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07100 KV808243.1 Protein Homology CDS 50921 51190 . + 0 ID=cds-OFJ77740.1;Parent=gene-HMPREF2844_07100;Dbxref=NCBI_GP:OFJ77740.1;Name=OFJ77740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312037.1;locus_tag=HMPREF2844_07100;product=hypothetical protein;protein_id=OFJ77740.1;transl_table=11 KV808243.1 Genbank gene 51860 53464 . - . ID=gene-HMPREF2844_07105;Name=HMPREF2844_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07105 KV808243.1 Protein Homology CDS 51860 53464 . - 0 ID=cds-OFJ77653.1;Parent=gene-HMPREF2844_07105;Dbxref=NCBI_GP:OFJ77653.1;Name=OFJ77653.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519489.1;locus_tag=HMPREF2844_07105;product=microcin ABC transporter ATP-binding protein;protein_id=OFJ77653.1;transl_table=11 KV808243.1 Genbank gene 53487 54395 . - . ID=gene-HMPREF2844_07110;Name=HMPREF2844_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07110 KV808243.1 Protein Homology CDS 53487 54395 . - 0 ID=cds-OFJ77654.1;Parent=gene-HMPREF2844_07110;Dbxref=NCBI_GP:OFJ77654.1;Name=OFJ77654.1;Note=with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004093079.1;locus_tag=HMPREF2844_07110;product=peptide ABC transporter permease;protein_id=OFJ77654.1;transl_table=11 KV808243.1 Genbank gene 54468 55388 . - . ID=gene-HMPREF2844_07115;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=HMPREF2844_07115 KV808243.1 Protein Homology CDS 54468 55388 . - 0 ID=cds-OFJ77655.1;Parent=gene-HMPREF2844_07115;Dbxref=NCBI_GP:OFJ77655.1;Name=OFJ77655.1;gbkey=CDS;gene=oppB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=HMPREF2844_07115;product=oligopeptide transporter permease;protein_id=OFJ77655.1;transl_table=11 KV808243.1 Genbank gene 55716 57512 . - . ID=gene-HMPREF2844_07120;Name=HMPREF2844_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07120 KV808243.1 Protein Homology CDS 55716 57512 . - 0 ID=cds-OFJ77656.1;Parent=gene-HMPREF2844_07120;Dbxref=NCBI_GP:OFJ77656.1;Name=OFJ77656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146933.1;locus_tag=HMPREF2844_07120;product=peptidase M24;protein_id=OFJ77656.1;transl_table=11 KV808243.1 Genbank gene 57608 59233 . - . ID=gene-HMPREF2844_07125;Name=HMPREF2844_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07125 KV808243.1 Protein Homology CDS 57608 59233 . - 0 ID=cds-OFJ77657.1;Parent=gene-HMPREF2844_07125;Dbxref=NCBI_GP:OFJ77657.1;Name=OFJ77657.1;Note=is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779989.1;locus_tag=HMPREF2844_07125;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=OFJ77657.1;transl_table=11 KV808243.1 Genbank gene 59545 60528 . + . ID=gene-HMPREF2844_07130;Name=HMPREF2844_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07130 KV808243.1 Protein Homology CDS 59545 60528 . + 0 ID=cds-OFJ77658.1;Parent=gene-HMPREF2844_07130;Dbxref=NCBI_GP:OFJ77658.1;Name=OFJ77658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758819.1;locus_tag=HMPREF2844_07130;product=hypothetical protein;protein_id=OFJ77658.1;transl_table=11 KV808243.1 Genbank gene 61025 61777 . + . ID=gene-HMPREF2844_07135;Name=HMPREF2844_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07135 KV808243.1 Protein Homology CDS 61025 61777 . + 0 ID=cds-OFJ77659.1;Parent=gene-HMPREF2844_07135;Dbxref=NCBI_GP:OFJ77659.1;Name=OFJ77659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755232.1;locus_tag=HMPREF2844_07135;product=ABC transporter ATP-binding protein;protein_id=OFJ77659.1;transl_table=11 KV808243.1 Genbank gene 61884 62759 . + . ID=gene-HMPREF2844_07140;Name=HMPREF2844_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07140 KV808243.1 Protein Homology CDS 61884 62759 . + 0 ID=cds-OFJ77660.1;Parent=gene-HMPREF2844_07140;Dbxref=NCBI_GP:OFJ77660.1;Name=OFJ77660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270326.1;locus_tag=HMPREF2844_07140;product=zinc ABC transporter permease;protein_id=OFJ77660.1;transl_table=11 KV808243.1 Genbank gene 63045 63773 . - . ID=gene-HMPREF2844_07145;Name=HMPREF2844_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07145 KV808243.1 Protein Homology CDS 63045 63773 . - 0 ID=cds-OFJ77682.1;Parent=gene-HMPREF2844_07145;Dbxref=NCBI_GP:OFJ77682.1;Name=OFJ77682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017629272.1;locus_tag=HMPREF2844_07145;product=hypothetical protein;protein_id=OFJ77682.1;transl_table=11 KV808243.1 Genbank gene 64581 66866 . - . ID=gene-HMPREF2844_07150;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=HMPREF2844_07150 KV808243.1 Protein Homology CDS 64581 66866 . - 0 ID=cds-OFJ77661.1;Parent=gene-HMPREF2844_07150;Dbxref=NCBI_GP:OFJ77661.1;Name=OFJ77661.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687459.1;locus_tag=HMPREF2844_07150;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=OFJ77661.1;transl_table=11 KV808243.1 Genbank gene 66868 67179 . - . ID=gene-HMPREF2844_07155;Name=HMPREF2844_07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07155 KV808243.1 Protein Homology CDS 66868 67179 . - 0 ID=cds-OFJ77662.1;Parent=gene-HMPREF2844_07155;Dbxref=NCBI_GP:OFJ77662.1;Name=OFJ77662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JV14.1;locus_tag=HMPREF2844_07155;product=ATP-dependent Clp protease adaptor ClpS;protein_id=OFJ77662.1;transl_table=11 KV808243.1 Genbank gene 67194 67424 . + . ID=gene-HMPREF2844_07160;Name=HMPREF2844_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07160 KV808243.1 Protein Homology CDS 67194 67424 . + 0 ID=cds-OFJ77663.1;Parent=gene-HMPREF2844_07160;Dbxref=NCBI_GP:OFJ77663.1;Name=OFJ77663.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755320.1;locus_tag=HMPREF2844_07160;product=hypothetical protein;protein_id=OFJ77663.1;transl_table=11 KV808243.1 Genbank gene 67491 67694 . + . ID=gene-HMPREF2844_07165;Name=HMPREF2844_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07165 KV808243.1 Protein Homology CDS 67491 67694 . + 0 ID=cds-OFJ77664.1;Parent=gene-HMPREF2844_07165;Dbxref=NCBI_GP:OFJ77664.1;Name=OFJ77664.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006478030.1;locus_tag=HMPREF2844_07165;product=cold-shock protein;protein_id=OFJ77664.1;transl_table=11 KV808243.1 Genbank gene 67777 68001 . + . ID=gene-HMPREF2844_07170;Name=HMPREF2844_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07170 KV808243.1 Protein Homology CDS 67777 68001 . + 0 ID=cds-OFJ77665.1;Parent=gene-HMPREF2844_07170;Dbxref=NCBI_GP:OFJ77665.1;Name=OFJ77665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763006.1;locus_tag=HMPREF2844_07170;product=branched-chain amino acid ABC transporter;protein_id=OFJ77665.1;transl_table=11 KV808243.1 Genbank gene 68078 68437 . - . ID=gene-HMPREF2844_07175;Name=HMPREF2844_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07175 KV808243.1 Protein Homology CDS 68078 68437 . - 0 ID=cds-OFJ77666.1;Parent=gene-HMPREF2844_07175;Dbxref=NCBI_GP:OFJ77666.1;Name=OFJ77666.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687463.1;locus_tag=HMPREF2844_07175;product=hypothetical protein;protein_id=OFJ77666.1;transl_table=11 KV808243.1 Genbank gene 68461 69354 . - . ID=gene-HMPREF2844_07180;Name=HMPREF2844_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07180 KV808243.1 Protein Homology CDS 68461 69354 . - 0 ID=cds-OFJ77667.1;Parent=gene-HMPREF2844_07180;Dbxref=NCBI_GP:OFJ77667.1;Name=OFJ77667.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003741405.1;locus_tag=HMPREF2844_07180;product=hypothetical protein;protein_id=OFJ77667.1;transl_table=11 KV808243.1 Genbank gene 69473 70090 . - . ID=gene-HMPREF2844_07185;Name=HMPREF2844_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07185 KV808243.1 Protein Homology CDS 69473 70090 . - 0 ID=cds-OFJ77668.1;Parent=gene-HMPREF2844_07185;Dbxref=NCBI_GP:OFJ77668.1;Name=OFJ77668.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745948.1;locus_tag=HMPREF2844_07185;product=hemolysin III;protein_id=OFJ77668.1;transl_table=11 KV808243.1 Genbank gene 70425 72986 . - . ID=gene-HMPREF2844_07190;Name=HMPREF2844_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07190 KV808243.1 Protein Homology CDS 70425 72986 . - 0 ID=cds-OFJ77669.1;Parent=gene-HMPREF2844_07190;Dbxref=NCBI_GP:OFJ77669.1;Name=OFJ77669.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762906.1;locus_tag=HMPREF2844_07190;product=protein-P-II uridylyltransferase;protein_id=OFJ77669.1;transl_table=11 KV808243.1 Genbank gene 73038 73355 . - . ID=gene-HMPREF2844_07195;Name=HMPREF2844_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07195 KV808243.1 Protein Homology CDS 73038 73355 . - 0 ID=cds-OFJ77670.1;Parent=gene-HMPREF2844_07195;Dbxref=NCBI_GP:OFJ77670.1;Name=OFJ77670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743902.1;locus_tag=HMPREF2844_07195;product=transcriptional regulator;protein_id=OFJ77670.1;transl_table=11 KV808243.1 Genbank gene 73713 74285 . - . ID=gene-HMPREF2844_07200;Name=HMPREF2844_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07200 KV808243.1 Protein Homology CDS 73713 74285 . - 0 ID=cds-OFJ77671.1;Parent=gene-HMPREF2844_07200;Dbxref=NCBI_GP:OFJ77671.1;Name=OFJ77671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755233.1;locus_tag=HMPREF2844_07200;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=OFJ77671.1;transl_table=11 KV808243.1 Genbank gene 74352 75335 . - . ID=gene-HMPREF2844_07205;Name=HMPREF2844_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07205 KV808243.1 Protein Homology CDS 74352 75335 . - 0 ID=cds-OFJ77672.1;Parent=gene-HMPREF2844_07205;Dbxref=NCBI_GP:OFJ77672.1;Name=OFJ77672.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P65235.1;locus_tag=HMPREF2844_07205;product=ribose-phosphate pyrophosphokinase;protein_id=OFJ77672.1;transl_table=11 KV808243.1 Genbank gene 75580 75655 . - . ID=gene-HMPREF2844_07210;Name=HMPREF2844_07210;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_07210 KV808243.1 tRNAscan-SE tRNA 75580 75655 . - . ID=rna-HMPREF2844_07210;Parent=gene-HMPREF2844_07210;anticodon=(pos:complement(75620..75622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07210;product=tRNA-Gln KV808243.1 tRNAscan-SE exon 75580 75655 . - . ID=exon-HMPREF2844_07210-1;Parent=rna-HMPREF2844_07210;anticodon=(pos:complement(75620..75622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07210;product=tRNA-Gln KV808243.1 Genbank gene 75662 76507 . - . ID=gene-HMPREF2844_07215;Name=ipk;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=HMPREF2844_07215 KV808243.1 Protein Homology CDS 75662 76507 . - 0 ID=cds-OFJ77673.1;Parent=gene-HMPREF2844_07215;Dbxref=NCBI_GP:OFJ77673.1;Name=OFJ77673.1;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;gbkey=CDS;gene=ipk;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270449.1;locus_tag=HMPREF2844_07215;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=OFJ77673.1;transl_table=11 KV808243.1 Genbank gene 76535 77122 . - . ID=gene-HMPREF2844_07220;Name=HMPREF2844_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07220 KV808243.1 Protein Homology CDS 76535 77122 . - 0 ID=cds-OFJ77674.1;Parent=gene-HMPREF2844_07220;Dbxref=NCBI_GP:OFJ77674.1;Name=OFJ77674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746457.1;locus_tag=HMPREF2844_07220;product=lipoprotein localization factor LolB;protein_id=OFJ77674.1;transl_table=11 KV808243.1 Genbank gene 77177 79036 . - . ID=gene-HMPREF2844_07225;Name=HMPREF2844_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07225 KV808243.1 Protein Homology CDS 77177 79036 . - 0 ID=cds-OFJ77675.1;Parent=gene-HMPREF2844_07225;Dbxref=NCBI_GP:OFJ77675.1;Name=OFJ77675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270451.1;locus_tag=HMPREF2844_07225;product=hypothetical protein;protein_id=OFJ77675.1;transl_table=11 KV808243.1 Genbank gene 79218 79829 . + . ID=gene-HMPREF2844_07230;Name=HMPREF2844_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07230 KV808243.1 Protein Homology CDS 79218 79829 . + 0 ID=cds-OFJ77683.1;Parent=gene-HMPREF2844_07230;Dbxref=NCBI_GP:OFJ77683.1;Name=OFJ77683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519907.1;locus_tag=HMPREF2844_07230;product=coenzyme A pyrophosphatase;protein_id=OFJ77683.1;transl_table=11 KV808243.1 Genbank gene 80022 80885 . + . ID=gene-HMPREF2844_07235;Name=HMPREF2844_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07235 KV808243.1 Protein Homology CDS 80022 80885 . + 0 ID=cds-OFJ77676.1;Parent=gene-HMPREF2844_07235;Dbxref=NCBI_GP:OFJ77676.1;Name=OFJ77676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464259.1;locus_tag=HMPREF2844_07235;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=OFJ77676.1;transl_table=11 KV808243.1 Genbank gene 81002 81745 . + . ID=gene-HMPREF2844_07240;Name=HMPREF2844_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07240 KV808243.1 Protein Homology CDS 81002 81745 . + 0 ID=cds-OFJ77677.1;Parent=gene-HMPREF2844_07240;Dbxref=NCBI_GP:OFJ77677.1;Name=OFJ77677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520512.1;locus_tag=HMPREF2844_07240;product=pseudouridylate synthase;protein_id=OFJ77677.1;transl_table=11 KV808243.1 Genbank gene 82185 83102 . + . ID=gene-HMPREF2844_07245;Name=HMPREF2844_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07245 KV808243.1 Protein Homology CDS 82185 83102 . + 0 ID=cds-OFJ77678.1;Parent=gene-HMPREF2844_07245;Dbxref=NCBI_GP:OFJ77678.1;Name=OFJ77678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311220.1;locus_tag=HMPREF2844_07245;product=4-hydroxybenzoate octaprenyltransferase;protein_id=OFJ77678.1;transl_table=11 KV808243.1 Genbank gene 83540 83989 . + . ID=gene-HMPREF2844_07250;Name=HMPREF2844_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07250 KV808243.1 Protein Homology CDS 83540 83989 . + 0 ID=cds-OFJ77679.1;Parent=gene-HMPREF2844_07250;Dbxref=NCBI_GP:OFJ77679.1;Name=OFJ77679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687701.1;locus_tag=HMPREF2844_07250;product=PTS sugar transporter subunit IIA;protein_id=OFJ77679.1;transl_table=11 KV808243.1 Genbank gene 83993 84955 . + . ID=gene-HMPREF2844_07255;Name=HMPREF2844_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07255 KV808243.1 Protein Homology CDS 83993 84955 . + 0 ID=cds-OFJ77680.1;Parent=gene-HMPREF2844_07255;Dbxref=NCBI_GP:OFJ77680.1;Name=OFJ77680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581160.1;locus_tag=HMPREF2844_07255;product=HPr kinase/phosphorylase;protein_id=OFJ77680.1;transl_table=11 KV808243.1 Genbank gene 84936 85790 . + . ID=gene-HMPREF2844_07260;Name=HMPREF2844_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07260 KV808243.1 Protein Homology CDS 84936 85790 . + 0 ID=cds-OFJ77681.1;Parent=gene-HMPREF2844_07260;Dbxref=NCBI_GP:OFJ77681.1;Name=OFJ77681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756091.1;locus_tag=HMPREF2844_07260;product=RNase adaptor protein RapZ;protein_id=OFJ77681.1;transl_table=11 KV808243.1 Genbank gene 85993 86223 . + . ID=gene-HMPREF2844_07265;Name=HMPREF2844_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07265 KV808243.1 Protein Homology CDS 85993 86223 . + 0 ID=cds-OFJ77514.1;Parent=gene-HMPREF2844_07265;Dbxref=NCBI_GP:OFJ77514.1;Name=OFJ77514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776813.1;locus_tag=HMPREF2844_07265;product=protocatechuate 3%2C4-dioxygenase;protein_id=OFJ77514.1;transl_table=11 KV808243.1 Genbank gene 86383 87324 . + . ID=gene-HMPREF2844_07270;Name=HMPREF2844_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07270 KV808243.1 Protein Homology CDS 86383 87324 . + 0 ID=cds-OFJ77515.1;Parent=gene-HMPREF2844_07270;Dbxref=NCBI_GP:OFJ77515.1;Name=OFJ77515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449265.1;locus_tag=HMPREF2844_07270;product=ribosome biogenesis GTPase YlqF;protein_id=OFJ77515.1;transl_table=11 KV808243.1 Genbank gene 87494 88639 . + . ID=gene-HMPREF2844_07275;Name=HMPREF2844_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07275 KV808243.1 Protein Homology CDS 87494 88639 . + 0 ID=cds-OFJ77516.1;Parent=gene-HMPREF2844_07275;Dbxref=NCBI_GP:OFJ77516.1;Name=OFJ77516.1;Note=dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245127.1;locus_tag=HMPREF2844_07275;product=succinyl-diaminopimelate desuccinylase;protein_id=OFJ77516.1;transl_table=11 KV808243.1 Genbank pseudogene 89336 90184 . + . ID=gene-HMPREF2844_07280;Name=HMPREF2844_07280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07280;pseudo=true KV808243.1 Protein Homology CDS 89336 90184 . + 0 ID=cds-HMPREF2844_07280;Parent=gene-HMPREF2844_07280;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448713.1;locus_tag=HMPREF2844_07280;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 KV808243.1 Genbank gene 90162 90719 . - . ID=gene-HMPREF2844_07285;Name=HMPREF2844_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07285 KV808243.1 Protein Homology CDS 90162 90719 . - 0 ID=cds-OFJ77517.1;Parent=gene-HMPREF2844_07285;Dbxref=NCBI_GP:OFJ77517.1;Name=OFJ77517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273197.1;locus_tag=HMPREF2844_07285;product=phosphatidylethanolamine-binding protein;protein_id=OFJ77517.1;transl_table=11 KV808243.1 Genbank gene 91031 91783 . + . ID=gene-HMPREF2844_07290;Name=HMPREF2844_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07290 KV808243.1 Protein Homology CDS 91031 91783 . + 0 ID=cds-OFJ77518.1;Parent=gene-HMPREF2844_07290;Dbxref=NCBI_GP:OFJ77518.1;Name=OFJ77518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220571.1;locus_tag=HMPREF2844_07290;product=cysteine methyltransferase;protein_id=OFJ77518.1;transl_table=11 KV808243.1 Genbank gene 91899 92894 . + . ID=gene-HMPREF2844_07295;Name=HMPREF2844_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07295 KV808243.1 Protein Homology CDS 91899 92894 . + 0 ID=cds-OFJ77519.1;Parent=gene-HMPREF2844_07295;Dbxref=NCBI_GP:OFJ77519.1;Name=OFJ77519.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P21302.1;locus_tag=HMPREF2844_07295;product=ornithine carbamoyltransferase;protein_id=OFJ77519.1;transl_table=11 KV808243.1 Genbank gene 93197 94915 . - . ID=gene-HMPREF2844_07300;Name=HMPREF2844_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07300 KV808243.1 Protein Homology CDS 93197 94915 . - 0 ID=cds-OFJ77520.1;Parent=gene-HMPREF2844_07300;Dbxref=NCBI_GP:OFJ77520.1;Name=OFJ77520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273414.1;locus_tag=HMPREF2844_07300;product=arginine--tRNA ligase;protein_id=OFJ77520.1;transl_table=11 KV808243.1 Genbank gene 95085 95894 . - . ID=gene-HMPREF2844_07305;Name=HMPREF2844_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07305 KV808243.1 Protein Homology CDS 95085 95894 . - 0 ID=cds-OFJ77521.1;Parent=gene-HMPREF2844_07305;Dbxref=NCBI_GP:OFJ77521.1;Name=OFJ77521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686718.1;locus_tag=HMPREF2844_07305;product=hypothetical protein;protein_id=OFJ77521.1;transl_table=11 KV808243.1 Genbank gene 95898 96665 . - . ID=gene-HMPREF2844_07310;Name=HMPREF2844_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07310 KV808243.1 Protein Homology CDS 95898 96665 . - 0 ID=cds-OFJ77522.1;Parent=gene-HMPREF2844_07310;Dbxref=NCBI_GP:OFJ77522.1;Name=OFJ77522.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776916.1;locus_tag=HMPREF2844_07310;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=OFJ77522.1;transl_table=11 KV808243.1 Genbank gene 97227 98576 . - . ID=gene-HMPREF2844_07315;Name=HMPREF2844_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07315 KV808243.1 Protein Homology CDS 97227 98576 . - 0 ID=cds-OFJ77523.1;Parent=gene-HMPREF2844_07315;Dbxref=NCBI_GP:OFJ77523.1;Name=OFJ77523.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116364.1;locus_tag=HMPREF2844_07315;product=exodeoxyribonuclease VII large subunit;protein_id=OFJ77523.1;transl_table=11 KV808243.1 Genbank gene 98689 99714 . + . ID=gene-HMPREF2844_07320;Name=HMPREF2844_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07320 KV808243.1 Protein Homology CDS 98689 99714 . + 0 ID=cds-OFJ77524.1;Parent=gene-HMPREF2844_07320;Dbxref=NCBI_GP:OFJ77524.1;Name=OFJ77524.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003774999.1;locus_tag=HMPREF2844_07320;product=tetraacyldisaccharide 4'-kinase;protein_id=OFJ77524.1;transl_table=11 KV808243.1 Genbank gene 99763 100299 . + . ID=gene-HMPREF2844_07325;Name=HMPREF2844_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07325 KV808243.1 Protein Homology CDS 99763 100299 . + 0 ID=cds-OFJ77525.1;Parent=gene-HMPREF2844_07325;Dbxref=NCBI_GP:OFJ77525.1;Name=OFJ77525.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311239.1;locus_tag=HMPREF2844_07325;product=hypothetical protein;protein_id=OFJ77525.1;transl_table=11 KV808243.1 Genbank gene 100326 100907 . + . ID=gene-HMPREF2844_07330;Name=HMPREF2844_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07330 KV808243.1 Protein Homology CDS 100326 100907 . + 0 ID=cds-OFJ77526.1;Parent=gene-HMPREF2844_07330;Dbxref=NCBI_GP:OFJ77526.1;Name=OFJ77526.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675614.1;locus_tag=HMPREF2844_07330;product=hypothetical protein;protein_id=OFJ77526.1;transl_table=11 KV808243.1 Genbank gene 101189 101705 . + . ID=gene-HMPREF2844_07335;Name=HMPREF2844_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07335;partial=true;start_range=.,101189 KV808243.1 Protein Homology CDS 101189 101705 . + 1 ID=cds-OFJ77488.1;Parent=gene-HMPREF2844_07335;Dbxref=NCBI_GP:OFJ77488.1;Name=OFJ77488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270541.1;locus_tag=HMPREF2844_07335;partial=true;product=hypothetical protein;protein_id=OFJ77488.1;start_range=.,101189;transl_table=11 KV808243.1 Genbank gene 101800 101982 . + . ID=gene-HMPREF2844_07340;Name=HMPREF2844_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07340 KV808243.1 Protein Homology CDS 101800 101982 . + 0 ID=cds-OFJ77489.1;Parent=gene-HMPREF2844_07340;Dbxref=NCBI_GP:OFJ77489.1;Name=OFJ77489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679524.1;locus_tag=HMPREF2844_07340;product=hypothetical protein;protein_id=OFJ77489.1;transl_table=11 KV808243.1 Genbank gene 101979 102740 . + . ID=gene-HMPREF2844_07345;Name=HMPREF2844_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07345 KV808243.1 Protein Homology CDS 101979 102740 . + 0 ID=cds-OFJ77490.1;Parent=gene-HMPREF2844_07345;Dbxref=NCBI_GP:OFJ77490.1;Name=OFJ77490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010359827.1;locus_tag=HMPREF2844_07345;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=OFJ77490.1;transl_table=11 KV808243.1 Genbank gene 102751 103269 . + . ID=gene-HMPREF2844_07350;Name=HMPREF2844_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07350 KV808243.1 Protein Homology CDS 102751 103269 . + 0 ID=cds-OFJ77491.1;Parent=gene-HMPREF2844_07350;Dbxref=NCBI_GP:OFJ77491.1;Name=OFJ77491.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173598.1;locus_tag=HMPREF2844_07350;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=OFJ77491.1;transl_table=11 KV808243.1 Genbank gene 103352 103999 . + . ID=gene-HMPREF2844_07355;Name=HMPREF2844_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07355 KV808243.1 Protein Homology CDS 103352 103999 . + 0 ID=cds-OFJ77492.1;Parent=gene-HMPREF2844_07355;Dbxref=NCBI_GP:OFJ77492.1;Name=OFJ77492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232195.1;locus_tag=HMPREF2844_07355;product=adenylate kinase;protein_id=OFJ77492.1;transl_table=11 KV808243.1 Genbank gene 104508 105239 . + . ID=gene-HMPREF2844_07360;Name=HMPREF2844_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07360 KV808243.1 Protein Homology CDS 104508 105239 . + 0 ID=cds-OFJ77377.1;Parent=gene-HMPREF2844_07360;Dbxref=NCBI_GP:OFJ77377.1;Name=OFJ77377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272634.1;locus_tag=HMPREF2844_07360;product=orotidine 5'-phosphate decarboxylase;protein_id=OFJ77377.1;transl_table=11 KV808243.1 Genbank gene 105336 105728 . + . ID=gene-HMPREF2844_07365;Name=HMPREF2844_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07365 KV808243.1 Protein Homology CDS 105336 105728 . + 0 ID=cds-OFJ77346.1;Parent=gene-HMPREF2844_07365;Dbxref=NCBI_GP:OFJ77346.1;Name=OFJ77346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707344.1;locus_tag=HMPREF2844_07365;product=hypothetical protein;protein_id=OFJ77346.1;transl_table=11 KV808243.1 Genbank gene 105834 106796 . + . ID=gene-HMPREF2844_07370;Name=HMPREF2844_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07370 KV808243.1 GeneMarkS+ CDS 105834 106796 . + 0 ID=cds-OFJ77347.1;Parent=gene-HMPREF2844_07370;Dbxref=NCBI_GP:OFJ77347.1;Name=OFJ77347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_07370;product=hypothetical protein;protein_id=OFJ77347.1;transl_table=11 KV808243.1 Genbank gene 106886 107890 . + . ID=gene-HMPREF2844_07375;Name=HMPREF2844_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07375 KV808243.1 Protein Homology CDS 106886 107890 . + 0 ID=cds-OFJ77348.1;Parent=gene-HMPREF2844_07375;Dbxref=NCBI_GP:OFJ77348.1;Name=OFJ77348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815422.1;locus_tag=HMPREF2844_07375;product=ADP-L-glycero-D-mannoheptose-6-epimerase;protein_id=OFJ77348.1;transl_table=11 KV808243.1 Genbank gene 107972 109159 . - . ID=gene-HMPREF2844_07380;Name=HMPREF2844_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07380 KV808243.1 Protein Homology CDS 107972 109159 . - 0 ID=cds-OFJ77349.1;Parent=gene-HMPREF2844_07380;Dbxref=NCBI_GP:OFJ77349.1;Name=OFJ77349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752738.1;locus_tag=HMPREF2844_07380;product=succinyldiaminopimelate transaminase;protein_id=OFJ77349.1;transl_table=11 KV808243.1 Genbank gene 109370 110539 . - . ID=gene-HMPREF2844_07385;Name=HMPREF2844_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07385 KV808243.1 Protein Homology CDS 109370 110539 . - 0 ID=cds-OFJ77350.1;Parent=gene-HMPREF2844_07385;Dbxref=NCBI_GP:OFJ77350.1;Name=OFJ77350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688209.1;locus_tag=HMPREF2844_07385;product=2-nitropropane dioxygenase;protein_id=OFJ77350.1;transl_table=11 KV808243.1 Genbank gene 110861 111787 . - . ID=gene-HMPREF2844_07390;Name=HMPREF2844_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07390 KV808243.1 Protein Homology CDS 110861 111787 . - 0 ID=cds-OFJ77351.1;Parent=gene-HMPREF2844_07390;Dbxref=NCBI_GP:OFJ77351.1;Name=OFJ77351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688210.1;locus_tag=HMPREF2844_07390;product=aldose epimerase;protein_id=OFJ77351.1;transl_table=11 KV808243.1 Genbank gene 111862 112911 . - . ID=gene-HMPREF2844_07395;Name=HMPREF2844_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07395 KV808243.1 Protein Homology CDS 111862 112911 . - 0 ID=cds-OFJ77352.1;Parent=gene-HMPREF2844_07395;Dbxref=NCBI_GP:OFJ77352.1;Name=OFJ77352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002250226.1;locus_tag=HMPREF2844_07395;product=23S rRNA pseudouridylate synthase B;protein_id=OFJ77352.1;transl_table=11 KV808243.1 Genbank gene 113146 113778 . - . ID=gene-HMPREF2844_07400;Name=HMPREF2844_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07400 KV808243.1 Protein Homology CDS 113146 113778 . - 0 ID=cds-OFJ77353.1;Parent=gene-HMPREF2844_07400;Dbxref=NCBI_GP:OFJ77353.1;Name=OFJ77353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449040.1;locus_tag=HMPREF2844_07400;product=pyridoxamine 5'-phosphate oxidase;protein_id=OFJ77353.1;transl_table=11 KV808243.1 Genbank gene 113901 114353 . + . ID=gene-HMPREF2844_07405;Name=HMPREF2844_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07405 KV808243.1 Protein Homology CDS 113901 114353 . + 0 ID=cds-OFJ77378.1;Parent=gene-HMPREF2844_07405;Dbxref=NCBI_GP:OFJ77378.1;Name=OFJ77378.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680707.1;locus_tag=HMPREF2844_07405;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=OFJ77378.1;transl_table=11 KV808243.1 Genbank gene 114520 115911 . + . ID=gene-HMPREF2844_07410;Name=HMPREF2844_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07410 KV808243.1 Protein Homology CDS 114520 115911 . + 0 ID=cds-OFJ77354.1;Parent=gene-HMPREF2844_07410;Dbxref=NCBI_GP:OFJ77354.1;Name=OFJ77354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675025.1;locus_tag=HMPREF2844_07410;product=xanthine permease;protein_id=OFJ77354.1;transl_table=11 KV808243.1 Genbank gene 116034 116846 . + . ID=gene-HMPREF2844_07415;Name=HMPREF2844_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07415 KV808243.1 GeneMarkS+ CDS 116034 116846 . + 0 ID=cds-OFJ77355.1;Parent=gene-HMPREF2844_07415;Dbxref=NCBI_GP:OFJ77355.1;Name=OFJ77355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_07415;product=hypothetical protein;protein_id=OFJ77355.1;transl_table=11 KV808243.1 Genbank gene 117381 117920 . + . ID=gene-HMPREF2844_07420;Name=HMPREF2844_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07420 KV808243.1 Protein Homology CDS 117381 117920 . + 0 ID=cds-OFJ77356.1;Parent=gene-HMPREF2844_07420;Dbxref=NCBI_GP:OFJ77356.1;Name=OFJ77356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688320.1;locus_tag=HMPREF2844_07420;product=hypothetical protein;protein_id=OFJ77356.1;transl_table=11 KV808243.1 Genbank gene 118618 119100 . - . ID=gene-HMPREF2844_07425;Name=HMPREF2844_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07425 KV808243.1 Protein Homology CDS 118618 119100 . - 0 ID=cds-OFJ77357.1;Parent=gene-HMPREF2844_07425;Dbxref=NCBI_GP:OFJ77357.1;Name=OFJ77357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216871.1;locus_tag=HMPREF2844_07425;product=acyl-CoA thioesterase;protein_id=OFJ77357.1;transl_table=11 KV808243.1 Genbank gene 119230 120303 . - . ID=gene-HMPREF2844_07430;Name=HMPREF2844_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07430 KV808243.1 Protein Homology CDS 119230 120303 . - 0 ID=cds-OFJ77379.1;Parent=gene-HMPREF2844_07430;Dbxref=NCBI_GP:OFJ77379.1;Name=OFJ77379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520352.1;locus_tag=HMPREF2844_07430;product=magnesium and cobalt transport protein CorA;protein_id=OFJ77379.1;transl_table=11 KV808243.1 Genbank gene 120523 120930 . + . ID=gene-HMPREF2844_07435;Name=HMPREF2844_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07435 KV808243.1 Protein Homology CDS 120523 120930 . + 0 ID=cds-OFJ77358.1;Parent=gene-HMPREF2844_07435;Dbxref=NCBI_GP:OFJ77358.1;Name=OFJ77358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270559.1;locus_tag=HMPREF2844_07435;product=hypothetical protein;protein_id=OFJ77358.1;transl_table=11 KV808243.1 Genbank gene 121064 122023 . + . ID=gene-HMPREF2844_07440;Name=HMPREF2844_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07440 KV808243.1 Protein Homology CDS 121064 122023 . + 0 ID=cds-OFJ77359.1;Parent=gene-HMPREF2844_07440;Dbxref=NCBI_GP:OFJ77359.1;Name=OFJ77359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270560.1;locus_tag=HMPREF2844_07440;product=DNA-binding protein;protein_id=OFJ77359.1;transl_table=11 KV808243.1 Genbank gene 122039 122332 . + . ID=gene-HMPREF2844_07445;Name=HMPREF2844_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07445 KV808243.1 Protein Homology CDS 122039 122332 . + 0 ID=cds-OFJ77360.1;Parent=gene-HMPREF2844_07445;Dbxref=NCBI_GP:OFJ77360.1;Name=OFJ77360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688412.1;locus_tag=HMPREF2844_07445;product=MerR family transcriptional regulator;protein_id=OFJ77360.1;transl_table=11 KV808243.1 Genbank gene 122612 123343 . + . ID=gene-HMPREF2844_07450;Name=HMPREF2844_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07450 KV808243.1 Protein Homology CDS 122612 123343 . + 0 ID=cds-OFJ77361.1;Parent=gene-HMPREF2844_07450;Dbxref=NCBI_GP:OFJ77361.1;Name=OFJ77361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270562.1;locus_tag=HMPREF2844_07450;product=uroporphyrinogen-III synthase;protein_id=OFJ77361.1;transl_table=11 KV808243.1 Genbank gene 123330 124844 . + . ID=gene-HMPREF2844_07455;Name=HMPREF2844_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07455 KV808243.1 Protein Homology CDS 123330 124844 . + 0 ID=cds-OFJ77362.1;Parent=gene-HMPREF2844_07455;Dbxref=NCBI_GP:OFJ77362.1;Name=OFJ77362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270563.1;locus_tag=HMPREF2844_07455;product=heme biosynthesis operon protein HemX;protein_id=OFJ77362.1;transl_table=11 KV808243.1 Genbank gene 124841 126064 . + . ID=gene-HMPREF2844_07460;Name=HMPREF2844_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07460 KV808243.1 Protein Homology CDS 124841 126064 . + 0 ID=cds-OFJ77363.1;Parent=gene-HMPREF2844_07460;Dbxref=NCBI_GP:OFJ77363.1;Name=OFJ77363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270564.1;locus_tag=HMPREF2844_07460;product=heme biosynthesis protein HemY;protein_id=OFJ77363.1;transl_table=11 KV808243.1 Genbank gene 126184 127245 . + . ID=gene-HMPREF2844_07465;Name=HMPREF2844_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07465 KV808243.1 Protein Homology CDS 126184 127245 . + 0 ID=cds-OFJ77364.1;Parent=gene-HMPREF2844_07465;Dbxref=NCBI_GP:OFJ77364.1;Name=OFJ77364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744307.1;locus_tag=HMPREF2844_07465;product=uroporphyrinogen decarboxylase;protein_id=OFJ77364.1;transl_table=11 KV808243.1 Genbank gene 127551 129044 . + . ID=gene-HMPREF2844_07470;Name=HMPREF2844_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07470 KV808243.1 Protein Homology CDS 127551 129044 . + 0 ID=cds-OFJ77365.1;Parent=gene-HMPREF2844_07470;Dbxref=NCBI_GP:OFJ77365.1;Name=OFJ77365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746320.1;locus_tag=HMPREF2844_07470;product=cardiolipin synthase;protein_id=OFJ77365.1;transl_table=11 KV808243.1 Genbank gene 129603 130058 . + . ID=gene-HMPREF2844_07475;Name=HMPREF2844_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07475 KV808243.1 GeneMarkS+ CDS 129603 130058 . + 0 ID=cds-OFJ77366.1;Parent=gene-HMPREF2844_07475;Dbxref=NCBI_GP:OFJ77366.1;Name=OFJ77366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_07475;product=hypothetical protein;protein_id=OFJ77366.1;transl_table=11 KV808243.1 Genbank gene 130097 130387 . + . ID=gene-HMPREF2844_07480;Name=HMPREF2844_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07480 KV808243.1 Protein Homology CDS 130097 130387 . + 0 ID=cds-OFJ77367.1;Parent=gene-HMPREF2844_07480;Dbxref=NCBI_GP:OFJ77367.1;Name=OFJ77367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778160.1;locus_tag=HMPREF2844_07480;product=hypothetical protein;protein_id=OFJ77367.1;transl_table=11 KV808243.1 Genbank gene 130484 131407 . - . ID=gene-HMPREF2844_07485;Name=HMPREF2844_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07485 KV808243.1 Protein Homology CDS 130484 131407 . - 0 ID=cds-OFJ77368.1;Parent=gene-HMPREF2844_07485;Dbxref=NCBI_GP:OFJ77368.1;Name=OFJ77368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217494.1;locus_tag=HMPREF2844_07485;product=pseudouridine synthase;protein_id=OFJ77368.1;transl_table=11 KV808243.1 Genbank gene 132762 134057 . + . ID=gene-HMPREF2844_07490;Name=HMPREF2844_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07490 KV808243.1 Protein Homology CDS 132762 134057 . + 0 ID=cds-OFJ77369.1;Parent=gene-HMPREF2844_07490;Dbxref=NCBI_GP:OFJ77369.1;Name=OFJ77369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZX9.1;locus_tag=HMPREF2844_07490;product=histidine--tRNA ligase;protein_id=OFJ77369.1;transl_table=11 KV808243.1 Genbank gene 134058 134687 . + . ID=gene-HMPREF2844_07495;Name=HMPREF2844_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07495 KV808243.1 Protein Homology CDS 134058 134687 . + 0 ID=cds-OFJ77370.1;Parent=gene-HMPREF2844_07495;Dbxref=NCBI_GP:OFJ77370.1;Name=OFJ77370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019742838.1;locus_tag=HMPREF2844_07495;product=hypothetical protein;protein_id=OFJ77370.1;transl_table=11 KV808243.1 Genbank gene 135171 136628 . + . ID=gene-HMPREF2844_07500;Name=HMPREF2844_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07500 KV808243.1 Protein Homology CDS 135171 136628 . + 0 ID=cds-OFJ77371.1;Parent=gene-HMPREF2844_07500;Dbxref=NCBI_GP:OFJ77371.1;Name=OFJ77371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707382.1;locus_tag=HMPREF2844_07500;product=ribosome biogenesis GTPase Der;protein_id=OFJ77371.1;transl_table=11 KV808243.1 Genbank gene 136999 137289 . + . ID=gene-HMPREF2844_07505;Name=HMPREF2844_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07505 KV808243.1 Protein Homology CDS 136999 137289 . + 0 ID=cds-OFJ77380.1;Parent=gene-HMPREF2844_07505;Dbxref=NCBI_GP:OFJ77380.1;Name=OFJ77380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449257.1;locus_tag=HMPREF2844_07505;product=RNA-binding protein Hfq;protein_id=OFJ77380.1;transl_table=11 KV808243.1 Genbank gene 137380 137949 . + . ID=gene-HMPREF2844_07510;Name=HMPREF2844_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07510 KV808243.1 Protein Homology CDS 137380 137949 . + 0 ID=cds-OFJ77372.1;Parent=gene-HMPREF2844_07510;Dbxref=NCBI_GP:OFJ77372.1;Name=OFJ77372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237812.1;locus_tag=HMPREF2844_07510;product=rRNA methyltransferase;protein_id=OFJ77372.1;transl_table=11 KV808243.1 Genbank gene 138002 138376 . + . ID=gene-HMPREF2844_07515;Name=HMPREF2844_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07515 KV808243.1 Protein Homology CDS 138002 138376 . + 0 ID=cds-OFJ77373.1;Parent=gene-HMPREF2844_07515;Dbxref=NCBI_GP:OFJ77373.1;Name=OFJ77373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762962.1;locus_tag=HMPREF2844_07515;product=SirB family protein;protein_id=OFJ77373.1;transl_table=11 KV808243.1 Genbank gene 138392 138889 . + . ID=gene-HMPREF2844_07520;Name=HMPREF2844_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07520 KV808243.1 Protein Homology CDS 138392 138889 . + 0 ID=cds-OFJ77374.1;Parent=gene-HMPREF2844_07520;Dbxref=NCBI_GP:OFJ77374.1;Name=OFJ77374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755335.1;locus_tag=HMPREF2844_07520;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=OFJ77374.1;transl_table=11 KV808243.1 Genbank gene 139111 139746 . + . ID=gene-HMPREF2844_07525;Name=HMPREF2844_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07525 KV808243.1 Protein Homology CDS 139111 139746 . + 0 ID=cds-OFJ77375.1;Parent=gene-HMPREF2844_07525;Dbxref=NCBI_GP:OFJ77375.1;Name=OFJ77375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683252.1;locus_tag=HMPREF2844_07525;product=deoxyguanosine kinase;protein_id=OFJ77375.1;transl_table=11 KV808243.1 Genbank gene 139855 140292 . + . ID=gene-HMPREF2844_07530;Name=HMPREF2844_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07530 KV808243.1 Protein Homology CDS 139855 140292 . + 0 ID=cds-OFJ77376.1;Parent=gene-HMPREF2844_07530;Dbxref=NCBI_GP:OFJ77376.1;Name=OFJ77376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004286126.1;locus_tag=HMPREF2844_07530;product=thiol peroxidase;protein_id=OFJ77376.1;transl_table=11 ##sequence-region KV808244.1 1 263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808244.1 Genbank region 1 263 . + . ID=KV808244.1:1..263;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808244.1 Genbank pseudogene 1 263 . + . ID=gene-HMPREF2844_07535;Name=HMPREF2844_07535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07535;pseudo=true KV808244.1 GeneMarkS+ CDS 1 263 . + 1 ID=cds-HMPREF2844_07535;Parent=gene-HMPREF2844_07535;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_07535;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region KV808245.1 1 50682 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808245.1 Genbank region 1 50682 . + . ID=KV808245.1:1..50682;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808245.1 Genbank gene 194 1822 . - . ID=gene-HMPREF2844_07540;Name=HMPREF2844_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07540 KV808245.1 Protein Homology CDS 194 1822 . - 0 ID=cds-OFJ77298.1;Parent=gene-HMPREF2844_07540;Dbxref=NCBI_GP:OFJ77298.1;Name=OFJ77298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582023.1;locus_tag=HMPREF2844_07540;product=ABC-F family ATPase;protein_id=OFJ77298.1;transl_table=11 KV808245.1 Genbank gene 1921 2115 . + . ID=gene-HMPREF2844_07545;Name=HMPREF2844_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07545 KV808245.1 Protein Homology CDS 1921 2115 . + 0 ID=cds-OFJ77299.1;Parent=gene-HMPREF2844_07545;Dbxref=NCBI_GP:OFJ77299.1;Name=OFJ77299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742028.1;locus_tag=HMPREF2844_07545;product=hypothetical protein;protein_id=OFJ77299.1;transl_table=11 KV808245.1 Genbank gene 2138 2599 . + . ID=gene-HMPREF2844_07550;Name=HMPREF2844_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07550 KV808245.1 Protein Homology CDS 2138 2599 . + 0 ID=cds-OFJ77300.1;Parent=gene-HMPREF2844_07550;Dbxref=NCBI_GP:OFJ77300.1;Name=OFJ77300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271644.1;locus_tag=HMPREF2844_07550;product=lipoic acid synthetase;protein_id=OFJ77300.1;transl_table=11 KV808245.1 Genbank gene 2666 3544 . - . ID=gene-HMPREF2844_07555;Name=HMPREF2844_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07555 KV808245.1 Protein Homology CDS 2666 3544 . - 0 ID=cds-OFJ77301.1;Parent=gene-HMPREF2844_07555;Dbxref=NCBI_GP:OFJ77301.1;Name=OFJ77301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009089634.1;locus_tag=HMPREF2844_07555;product=cupin;protein_id=OFJ77301.1;transl_table=11 KV808245.1 Genbank gene 3687 4022 . + . ID=gene-HMPREF2844_07560;Name=HMPREF2844_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07560 KV808245.1 Protein Homology CDS 3687 4022 . + 0 ID=cds-OFJ77302.1;Parent=gene-HMPREF2844_07560;Dbxref=NCBI_GP:OFJ77302.1;Name=OFJ77302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686410.1;locus_tag=HMPREF2844_07560;product=hypothetical protein;protein_id=OFJ77302.1;transl_table=11 KV808245.1 Genbank gene 4037 4627 . + . ID=gene-HMPREF2844_07565;Name=HMPREF2844_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07565 KV808245.1 Protein Homology CDS 4037 4627 . + 0 ID=cds-OFJ77303.1;Parent=gene-HMPREF2844_07565;Dbxref=NCBI_GP:OFJ77303.1;Name=OFJ77303.1;Note=TrpG%3B with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine%3B TrpG provides the glutamine amidotransferase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767156.1;locus_tag=HMPREF2844_07565;product=glutamine amidotransferase;protein_id=OFJ77303.1;transl_table=11 KV808245.1 Genbank gene 4695 5729 . + . ID=gene-HMPREF2844_07570;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=HMPREF2844_07570 KV808245.1 Protein Homology CDS 4695 5729 . + 0 ID=cds-OFJ77304.1;Parent=gene-HMPREF2844_07570;Dbxref=NCBI_GP:OFJ77304.1;Name=OFJ77304.1;Note=Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=trpD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686351.1;locus_tag=HMPREF2844_07570;product=anthranilate phosphoribosyltransferase;protein_id=OFJ77304.1;transl_table=11 KV808245.1 Genbank gene 6244 6915 . + . ID=gene-HMPREF2844_07575;Name=HMPREF2844_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07575 KV808245.1 Protein Homology CDS 6244 6915 . + 0 ID=cds-OFJ77305.1;Parent=gene-HMPREF2844_07575;Dbxref=NCBI_GP:OFJ77305.1;Name=OFJ77305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761174.1;locus_tag=HMPREF2844_07575;product=hypothetical protein;protein_id=OFJ77305.1;transl_table=11 KV808245.1 Genbank gene 6936 7991 . + . ID=gene-HMPREF2844_07580;Name=HMPREF2844_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07580 KV808245.1 Protein Homology CDS 6936 7991 . + 0 ID=cds-OFJ77306.1;Parent=gene-HMPREF2844_07580;Dbxref=NCBI_GP:OFJ77306.1;Name=OFJ77306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686349.1;locus_tag=HMPREF2844_07580;product=acriflavin resistance protein;protein_id=OFJ77306.1;transl_table=11 KV808245.1 Genbank gene 8171 10171 . + . ID=gene-HMPREF2844_07585;Name=HMPREF2844_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07585 KV808245.1 Protein Homology CDS 8171 10171 . + 0 ID=cds-OFJ77307.1;Parent=gene-HMPREF2844_07585;Dbxref=NCBI_GP:OFJ77307.1;Name=OFJ77307.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761167.1;locus_tag=HMPREF2844_07585;product=glycogen debranching enzyme;protein_id=OFJ77307.1;transl_table=11 KV808245.1 Genbank gene 10383 12863 . + . ID=gene-HMPREF2844_07590;Name=HMPREF2844_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07590 KV808245.1 Protein Homology CDS 10383 12863 . + 0 ID=cds-OFJ77308.1;Parent=gene-HMPREF2844_07590;Dbxref=NCBI_GP:OFJ77308.1;Name=OFJ77308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311266.1;locus_tag=HMPREF2844_07590;product=glycogen phosphorylase;protein_id=OFJ77308.1;transl_table=11 KV808245.1 Genbank gene 13194 14630 . + . ID=gene-HMPREF2844_07595;Name=HMPREF2844_07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07595 KV808245.1 Protein Homology CDS 13194 14630 . + 0 ID=cds-OFJ77309.1;Parent=gene-HMPREF2844_07595;Dbxref=NCBI_GP:OFJ77309.1;Name=OFJ77309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575397.1;locus_tag=HMPREF2844_07595;product=alginate O-acetyltransferase;protein_id=OFJ77309.1;transl_table=11 KV808245.1 Genbank gene 14646 15719 . + . ID=gene-HMPREF2844_07600;Name=HMPREF2844_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07600 KV808245.1 Protein Homology CDS 14646 15719 . + 0 ID=cds-OFJ77310.1;Parent=gene-HMPREF2844_07600;Dbxref=NCBI_GP:OFJ77310.1;Name=OFJ77310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777987.1;locus_tag=HMPREF2844_07600;product=hypothetical protein;protein_id=OFJ77310.1;transl_table=11 KV808245.1 Genbank gene 15834 16943 . + . ID=gene-HMPREF2844_07605;Name=HMPREF2844_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07605 KV808245.1 Protein Homology CDS 15834 16943 . + 0 ID=cds-OFJ77311.1;Parent=gene-HMPREF2844_07605;Dbxref=NCBI_GP:OFJ77311.1;Name=OFJ77311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742253.1;locus_tag=HMPREF2844_07605;product=hypothetical protein;protein_id=OFJ77311.1;transl_table=11 KV808245.1 Genbank gene 17278 18102 . + . ID=gene-HMPREF2844_07610;Name=HMPREF2844_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07610 KV808245.1 Protein Homology CDS 17278 18102 . + 0 ID=cds-OFJ77312.1;Parent=gene-HMPREF2844_07610;Dbxref=NCBI_GP:OFJ77312.1;Name=OFJ77312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173727.1;locus_tag=HMPREF2844_07610;product=amino acid ABC transporter substrate-binding protein;protein_id=OFJ77312.1;transl_table=11 KV808245.1 Genbank gene 18092 18808 . + . ID=gene-HMPREF2844_07615;Name=HMPREF2844_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07615 KV808245.1 Protein Homology CDS 18092 18808 . + 0 ID=cds-OFJ77313.1;Parent=gene-HMPREF2844_07615;Dbxref=NCBI_GP:OFJ77313.1;Name=OFJ77313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011200450.1;locus_tag=HMPREF2844_07615;product=cysteine ABC transporter permease;protein_id=OFJ77313.1;transl_table=11 KV808245.1 Genbank gene 18818 19585 . + . ID=gene-HMPREF2844_07620;Name=HMPREF2844_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07620 KV808245.1 Protein Homology CDS 18818 19585 . + 0 ID=cds-OFJ77314.1;Parent=gene-HMPREF2844_07620;Dbxref=NCBI_GP:OFJ77314.1;Name=OFJ77314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311374.1;locus_tag=HMPREF2844_07620;product=polar amino acid ABC transporter ATP-binding protein;protein_id=OFJ77314.1;transl_table=11 KV808245.1 Genbank gene 19882 21804 . + . ID=gene-HMPREF2844_07625;Name=HMPREF2844_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07625 KV808245.1 Protein Homology CDS 19882 21804 . + 0 ID=cds-OFJ77315.1;Parent=gene-HMPREF2844_07625;Dbxref=NCBI_GP:OFJ77315.1;Name=OFJ77315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758575.1;locus_tag=HMPREF2844_07625;product=ABC transporter;protein_id=OFJ77315.1;transl_table=11 KV808245.1 Genbank gene 21938 22306 . + . ID=gene-HMPREF2844_07630;Name=HMPREF2844_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07630 KV808245.1 Protein Homology CDS 21938 22306 . + 0 ID=cds-OFJ77316.1;Parent=gene-HMPREF2844_07630;Dbxref=NCBI_GP:OFJ77316.1;Name=OFJ77316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777928.1;locus_tag=HMPREF2844_07630;product=nucleolar protein;protein_id=OFJ77316.1;transl_table=11 KV808245.1 Genbank gene 22460 23011 . + . ID=gene-HMPREF2844_07635;Name=HMPREF2844_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07635 KV808245.1 Protein Homology CDS 22460 23011 . + 0 ID=cds-OFJ77317.1;Parent=gene-HMPREF2844_07635;Dbxref=NCBI_GP:OFJ77317.1;Name=OFJ77317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679204.1;locus_tag=HMPREF2844_07635;product=hypothetical protein;protein_id=OFJ77317.1;transl_table=11 KV808245.1 Genbank gene 23168 23941 . - . ID=gene-HMPREF2844_07640;Name=HMPREF2844_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07640 KV808245.1 Protein Homology CDS 23168 23941 . - 0 ID=cds-OFJ77318.1;Parent=gene-HMPREF2844_07640;Dbxref=NCBI_GP:OFJ77318.1;Name=OFJ77318.1;Note=similar protein in Methanocaldococcus converts GTP to 7%2C8-dihydro-D-neopterin 2'%2C3'-cyclic phosphate as the first step in methanopterin biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002243420.1;locus_tag=HMPREF2844_07640;product=GTP cyclohydrolase FolE2;protein_id=OFJ77318.1;transl_table=11 KV808245.1 Genbank gene 24123 25280 . + . ID=gene-HMPREF2844_07645;Name=HMPREF2844_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07645 KV808245.1 Protein Homology CDS 24123 25280 . + 0 ID=cds-OFJ77319.1;Parent=gene-HMPREF2844_07645;Dbxref=NCBI_GP:OFJ77319.1;Name=OFJ77319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270119.1;locus_tag=HMPREF2844_07645;product=cystathionine gamma-synthase;protein_id=OFJ77319.1;transl_table=11 KV808245.1 Genbank gene 25373 25831 . + . ID=gene-HMPREF2844_07650;Name=HMPREF2844_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07650 KV808245.1 Protein Homology CDS 25373 25831 . + 0 ID=cds-OFJ77320.1;Parent=gene-HMPREF2844_07650;Dbxref=NCBI_GP:OFJ77320.1;Name=OFJ77320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742269.1;locus_tag=HMPREF2844_07650;product=META domain-containing protein;protein_id=OFJ77320.1;transl_table=11 KV808245.1 Genbank gene 26114 26893 . + . ID=gene-HMPREF2844_07655;Name=HMPREF2844_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07655 KV808245.1 Protein Homology CDS 26114 26893 . + 0 ID=cds-OFJ77321.1;Parent=gene-HMPREF2844_07655;Dbxref=NCBI_GP:OFJ77321.1;Name=OFJ77321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687762.1;locus_tag=HMPREF2844_07655;product=ferredoxin--NADP(+) reductase;protein_id=OFJ77321.1;transl_table=11 KV808245.1 Genbank gene 26920 28110 . + . ID=gene-HMPREF2844_07660;Name=HMPREF2844_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07660 KV808245.1 Protein Homology CDS 26920 28110 . + 0 ID=cds-OFJ77322.1;Parent=gene-HMPREF2844_07660;Dbxref=NCBI_GP:OFJ77322.1;Name=OFJ77322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767725.1;locus_tag=HMPREF2844_07660;product=GTPase HflX;protein_id=OFJ77322.1;transl_table=11 KV808245.1 Genbank gene 28948 31419 . + . ID=gene-HMPREF2844_07665;Name=HMPREF2844_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07665 KV808245.1 Protein Homology CDS 28948 31419 . + 0 ID=cds-OFJ77323.1;Parent=gene-HMPREF2844_07665;Dbxref=NCBI_GP:OFJ77323.1;Name=OFJ77323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687765.1;locus_tag=HMPREF2844_07665;product=ATPase P;protein_id=OFJ77323.1;transl_table=11 KV808245.1 Genbank gene 31802 33829 . - . ID=gene-HMPREF2844_07670;Name=HMPREF2844_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07670 KV808245.1 Protein Homology CDS 31802 33829 . - 0 ID=cds-OFJ77333.1;Parent=gene-HMPREF2844_07670;Dbxref=NCBI_GP:OFJ77333.1;Name=OFJ77333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311336.1;locus_tag=HMPREF2844_07670;product=transporter;protein_id=OFJ77333.1;transl_table=11 KV808245.1 Genbank gene 34305 35096 . + . ID=gene-HMPREF2844_07675;Name=HMPREF2844_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07675 KV808245.1 Protein Homology CDS 34305 35096 . + 0 ID=cds-OFJ77324.1;Parent=gene-HMPREF2844_07675;Dbxref=NCBI_GP:OFJ77324.1;Name=OFJ77324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283586.1;locus_tag=HMPREF2844_07675;product=NAD(+) synthetase;protein_id=OFJ77324.1;transl_table=11 KV808245.1 Genbank gene 35253 37277 . + . ID=gene-HMPREF2844_07680;Name=HMPREF2844_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07680 KV808245.1 Protein Homology CDS 35253 37277 . + 0 ID=cds-OFJ77334.1;Parent=gene-HMPREF2844_07680;Dbxref=NCBI_GP:OFJ77334.1;Name=OFJ77334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311697.1;locus_tag=HMPREF2844_07680;product=recombinase;protein_id=OFJ77334.1;transl_table=11 KV808245.1 Genbank gene 37395 38426 . - . ID=gene-HMPREF2844_07685;Name=HMPREF2844_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07685 KV808245.1 Protein Homology CDS 37395 38426 . - 0 ID=cds-OFJ77325.1;Parent=gene-HMPREF2844_07685;Dbxref=NCBI_GP:OFJ77325.1;Name=OFJ77325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217138.1;locus_tag=HMPREF2844_07685;product=Holliday junction DNA helicase RuvB;protein_id=OFJ77325.1;transl_table=11 KV808245.1 Genbank gene 38498 38806 . - . ID=gene-HMPREF2844_07690;Name=HMPREF2844_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07690 KV808245.1 Protein Homology CDS 38498 38806 . - 0 ID=cds-OFJ77326.1;Parent=gene-HMPREF2844_07690;Dbxref=NCBI_GP:OFJ77326.1;Name=OFJ77326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219238.1;locus_tag=HMPREF2844_07690;product=hypothetical protein;protein_id=OFJ77326.1;transl_table=11 KV808245.1 Genbank pseudogene 38870 39508 . - . ID=gene-HMPREF2844_07695;Name=HMPREF2844_07695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07695;pseudo=true KV808245.1 Protein Homology CDS 38870 39508 . - 0 ID=cds-HMPREF2844_07695;Parent=gene-HMPREF2844_07695;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778457.1;locus_tag=HMPREF2844_07695;product=hypothetical protein;pseudo=true;transl_table=11 KV808245.1 Genbank gene 39519 40754 . - . ID=gene-HMPREF2844_07700;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=HMPREF2844_07700 KV808245.1 Protein Homology CDS 39519 40754 . - 0 ID=cds-OFJ77335.1;Parent=gene-HMPREF2844_07700;Dbxref=NCBI_GP:OFJ77335.1;Name=OFJ77335.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003714108.1;locus_tag=HMPREF2844_07700;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=OFJ77335.1;transl_table=11 KV808245.1 Genbank gene 40948 41907 . - . ID=gene-HMPREF2844_07705;Name=HMPREF2844_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07705 KV808245.1 Protein Homology CDS 40948 41907 . - 0 ID=cds-OFJ77327.1;Parent=gene-HMPREF2844_07705;Dbxref=NCBI_GP:OFJ77327.1;Name=OFJ77327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752410.1;locus_tag=HMPREF2844_07705;product=stomatin 2;protein_id=OFJ77327.1;transl_table=11 KV808245.1 Genbank gene 41947 42354 . - . ID=gene-HMPREF2844_07710;Name=HMPREF2844_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07710 KV808245.1 Protein Homology CDS 41947 42354 . - 0 ID=cds-OFJ77328.1;Parent=gene-HMPREF2844_07710;Dbxref=NCBI_GP:OFJ77328.1;Name=OFJ77328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283566.1;locus_tag=HMPREF2844_07710;product=nodulation efficiency NfeD family protein;protein_id=OFJ77328.1;transl_table=11 KV808245.1 Genbank gene 42498 43808 . - . ID=gene-HMPREF2844_07715;Name=HMPREF2844_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07715 KV808245.1 Protein Homology CDS 42498 43808 . - 0 ID=cds-OFJ77329.1;Parent=gene-HMPREF2844_07715;Dbxref=NCBI_GP:OFJ77329.1;Name=OFJ77329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760661.1;locus_tag=HMPREF2844_07715;product=hypothetical protein;protein_id=OFJ77329.1;transl_table=11 KV808245.1 Genbank gene 43901 45670 . - . ID=gene-HMPREF2844_07720;Name=HMPREF2844_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07720 KV808245.1 Protein Homology CDS 43901 45670 . - 0 ID=cds-OFJ77336.1;Parent=gene-HMPREF2844_07720;Dbxref=NCBI_GP:OFJ77336.1;Name=OFJ77336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743106.1;locus_tag=HMPREF2844_07720;product=ABC transporter permease;protein_id=OFJ77336.1;transl_table=11 KV808245.1 Genbank gene 45922 48144 . + . ID=gene-HMPREF2844_07725;Name=HMPREF2844_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07725 KV808245.1 Protein Homology CDS 45922 48144 . + 0 ID=cds-OFJ77330.1;Parent=gene-HMPREF2844_07725;Dbxref=NCBI_GP:OFJ77330.1;Name=OFJ77330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685727.1;locus_tag=HMPREF2844_07725;product=ligand-gated channel protein;protein_id=OFJ77330.1;transl_table=11 KV808245.1 Genbank gene 48282 48848 . - . ID=gene-HMPREF2844_07730;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=HMPREF2844_07730 KV808245.1 Protein Homology CDS 48282 48848 . - 0 ID=cds-OFJ77331.1;Parent=gene-HMPREF2844_07730;Dbxref=NCBI_GP:OFJ77331.1;Name=OFJ77331.1;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;gbkey=CDS;gene=dcd;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670287.1;locus_tag=HMPREF2844_07730;product=deoxycytidine triphosphate deaminase;protein_id=OFJ77331.1;transl_table=11 KV808245.1 Genbank gene 48920 49336 . - . ID=gene-HMPREF2844_07735;Name=HMPREF2844_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07735 KV808245.1 Protein Homology CDS 48920 49336 . - 0 ID=cds-OFJ77337.1;Parent=gene-HMPREF2844_07735;Dbxref=NCBI_GP:OFJ77337.1;Name=OFJ77337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449185.1;locus_tag=HMPREF2844_07735;product=hypothetical protein;protein_id=OFJ77337.1;transl_table=11 KV808245.1 Genbank gene 49399 50298 . - . ID=gene-HMPREF2844_07740;Name=HMPREF2844_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07740 KV808245.1 Protein Homology CDS 49399 50298 . - 0 ID=cds-OFJ77332.1;Parent=gene-HMPREF2844_07740;Dbxref=NCBI_GP:OFJ77332.1;Name=OFJ77332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O87408.1;locus_tag=HMPREF2844_07740;product=recombination-associated protein RdgC;protein_id=OFJ77332.1;transl_table=11 KV808245.1 Genbank gene 50454 50529 . + . ID=gene-HMPREF2844_07745;Name=HMPREF2844_07745;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_07745 KV808245.1 tRNAscan-SE tRNA 50454 50529 . + . ID=rna-HMPREF2844_07745;Parent=gene-HMPREF2844_07745;anticodon=(pos:50488..50490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07745;product=tRNA-Glu KV808245.1 tRNAscan-SE exon 50454 50529 . + . ID=exon-HMPREF2844_07745-1;Parent=rna-HMPREF2844_07745;anticodon=(pos:50488..50490);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07745;product=tRNA-Glu ##sequence-region KV808246.1 1 374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808246.1 Genbank region 1 374 . + . ID=KV808246.1:1..374;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808246.1 Genbank pseudogene 1 205 . - . ID=gene-HMPREF2844_07750;Name=HMPREF2844_07750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07750;pseudo=true KV808246.1 Protein Homology CDS 1 205 . - 0 ID=cds-HMPREF2844_07750;Parent=gene-HMPREF2844_07750;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231594.1;locus_tag=HMPREF2844_07750;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808247.1 1 24358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808247.1 Genbank region 1 24358 . + . ID=KV808247.1:1..24358;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808247.1 Genbank pseudogene 816 1178 . + . ID=gene-HMPREF2844_07755;Name=HMPREF2844_07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07755;pseudo=true KV808247.1 GeneMarkS+ CDS 816 1178 . + 0 ID=cds-HMPREF2844_07755;Parent=gene-HMPREF2844_07755;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_07755;product=hypothetical protein;pseudo=true;transl_table=11 KV808247.1 Genbank gene 1279 3692 . + . ID=gene-HMPREF2844_07760;Name=HMPREF2844_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07760;partial=true;start_range=.,1279 KV808247.1 Protein Homology CDS 1279 3692 . + 2 ID=cds-OFJ77237.1;Parent=gene-HMPREF2844_07760;Dbxref=NCBI_GP:OFJ77237.1;Name=OFJ77237.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744385.1;locus_tag=HMPREF2844_07760;partial=true;product=hypothetical protein;protein_id=OFJ77237.1;start_range=.,1279;transl_table=11 KV808247.1 Genbank gene 3752 4546 . - . ID=gene-HMPREF2844_07765;Name=HMPREF2844_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07765 KV808247.1 Protein Homology CDS 3752 4546 . - 0 ID=cds-OFJ77238.1;Parent=gene-HMPREF2844_07765;Dbxref=NCBI_GP:OFJ77238.1;Name=OFJ77238.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JY72.1;locus_tag=HMPREF2844_07765;product=thymidylate synthase;protein_id=OFJ77238.1;transl_table=11 KV808247.1 Genbank gene 5076 6413 . + . ID=gene-HMPREF2844_07770;Name=HMPREF2844_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07770 KV808247.1 Protein Homology CDS 5076 6413 . + 0 ID=cds-OFJ77239.1;Parent=gene-HMPREF2844_07770;Dbxref=NCBI_GP:OFJ77239.1;Name=OFJ77239.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019361559.1;locus_tag=HMPREF2844_07770;product=glutamate dehydrogenase;protein_id=OFJ77239.1;transl_table=11 KV808247.1 Genbank gene 6549 7910 . + . ID=gene-HMPREF2844_07775;Name=HMPREF2844_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07775 KV808247.1 Protein Homology CDS 6549 7910 . + 0 ID=cds-OFJ77240.1;Parent=gene-HMPREF2844_07775;Dbxref=NCBI_GP:OFJ77240.1;Name=OFJ77240.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270433.1;locus_tag=HMPREF2844_07775;product=peptidase M16;protein_id=OFJ77240.1;transl_table=11 KV808247.1 Genbank gene 8047 8961 . + . ID=gene-HMPREF2844_07780;Name=HMPREF2844_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07780 KV808247.1 Protein Homology CDS 8047 8961 . + 0 ID=cds-OFJ77241.1;Parent=gene-HMPREF2844_07780;Dbxref=NCBI_GP:OFJ77241.1;Name=OFJ77241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686745.1;locus_tag=HMPREF2844_07780;product=esterase;protein_id=OFJ77241.1;transl_table=11 KV808247.1 Genbank gene 9047 10234 . - . ID=gene-HMPREF2844_07785;Name=HMPREF2844_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07785 KV808247.1 Protein Homology CDS 9047 10234 . - 0 ID=cds-OFJ77242.1;Parent=gene-HMPREF2844_07785;Dbxref=NCBI_GP:OFJ77242.1;Name=OFJ77242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750256.1;locus_tag=HMPREF2844_07785;product=c-type cytochrome biogenesis protein CcsB;protein_id=OFJ77242.1;transl_table=11 KV808247.1 Genbank gene 10224 12179 . - . ID=gene-HMPREF2844_07790;Name=HMPREF2844_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07790 KV808247.1 Protein Homology CDS 10224 12179 . - 0 ID=cds-OFJ77243.1;Parent=gene-HMPREF2844_07790;Dbxref=NCBI_GP:OFJ77243.1;Name=OFJ77243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710222.1;locus_tag=HMPREF2844_07790;product=cytochrome C biogenesis protein;protein_id=OFJ77243.1;transl_table=11 KV808247.1 Genbank gene 12502 13128 . - . ID=gene-HMPREF2844_07795;Name=HMPREF2844_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07795 KV808247.1 Protein Homology CDS 12502 13128 . - 0 ID=cds-OFJ77244.1;Parent=gene-HMPREF2844_07795;Dbxref=NCBI_GP:OFJ77244.1;Name=OFJ77244.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712573.1;locus_tag=HMPREF2844_07795;product=cytochrome C;protein_id=OFJ77244.1;transl_table=11 KV808247.1 Genbank gene 13329 13982 . + . ID=gene-HMPREF2844_07800;Name=HMPREF2844_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07800 KV808247.1 Protein Homology CDS 13329 13982 . + 0 ID=cds-OFJ77245.1;Parent=gene-HMPREF2844_07800;Dbxref=NCBI_GP:OFJ77245.1;Name=OFJ77245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776201.1;locus_tag=HMPREF2844_07800;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=OFJ77245.1;transl_table=11 KV808247.1 Genbank gene 14231 14668 . - . ID=gene-HMPREF2844_07805;Name=HMPREF2844_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07805 KV808247.1 Protein Homology CDS 14231 14668 . - 0 ID=cds-OFJ77246.1;Parent=gene-HMPREF2844_07805;Dbxref=NCBI_GP:OFJ77246.1;Name=OFJ77246.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002216614.1;locus_tag=HMPREF2844_07805;product=biopolymer transporter ExbD;protein_id=OFJ77246.1;transl_table=11 KV808247.1 Genbank gene 14672 15331 . - . ID=gene-HMPREF2844_07810;Name=HMPREF2844_07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07810 KV808247.1 Protein Homology CDS 14672 15331 . - 0 ID=cds-OFJ77247.1;Parent=gene-HMPREF2844_07810;Dbxref=NCBI_GP:OFJ77247.1;Name=OFJ77247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680108.1;locus_tag=HMPREF2844_07810;product=biopolymer transporter ExbB;protein_id=OFJ77247.1;transl_table=11 KV808247.1 Genbank gene 15399 16340 . - . ID=gene-HMPREF2844_07815;Name=HMPREF2844_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07815 KV808247.1 Protein Homology CDS 15399 16340 . - 0 ID=cds-OFJ77248.1;Parent=gene-HMPREF2844_07815;Dbxref=NCBI_GP:OFJ77248.1;Name=OFJ77248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759372.1;locus_tag=HMPREF2844_07815;product=energy transducer TonB;protein_id=OFJ77248.1;transl_table=11 KV808247.1 Genbank gene 16850 17314 . - . ID=gene-HMPREF2844_07820;Name=HMPREF2844_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07820 KV808247.1 Protein Homology CDS 16850 17314 . - 0 ID=cds-OFJ77249.1;Parent=gene-HMPREF2844_07820;Dbxref=NCBI_GP:OFJ77249.1;Name=OFJ77249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759367.1;locus_tag=HMPREF2844_07820;product=Rrf2 family transcriptional regulator;protein_id=OFJ77249.1;transl_table=11 KV808247.1 Genbank gene 17485 17865 . + . ID=gene-HMPREF2844_07825;Name=HMPREF2844_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07825 KV808247.1 Protein Homology CDS 17485 17865 . + 0 ID=cds-OFJ77250.1;Parent=gene-HMPREF2844_07825;Dbxref=NCBI_GP:OFJ77250.1;Name=OFJ77250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270443.1;locus_tag=HMPREF2844_07825;product=hypothetical protein;protein_id=OFJ77250.1;transl_table=11 KV808247.1 Genbank gene 17970 19127 . + . ID=gene-HMPREF2844_07830;Name=HMPREF2844_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07830 KV808247.1 Protein Homology CDS 17970 19127 . + 0 ID=cds-OFJ77251.1;Parent=gene-HMPREF2844_07830;Dbxref=NCBI_GP:OFJ77251.1;Name=OFJ77251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711121.1;locus_tag=HMPREF2844_07830;product=NnrS protein;protein_id=OFJ77251.1;transl_table=11 KV808247.1 Genbank gene 19470 22715 . - . ID=gene-HMPREF2844_07835;Name=HMPREF2844_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07835 KV808247.1 Protein Homology CDS 19470 22715 . - 0 ID=cds-OFJ77252.1;Parent=gene-HMPREF2844_07835;Dbxref=NCBI_GP:OFJ77252.1;Name=OFJ77252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270445.1;locus_tag=HMPREF2844_07835;product=pilus assembly protein;protein_id=OFJ77252.1;transl_table=11 KV808247.1 Genbank gene 23110 24240 . + . ID=gene-HMPREF2844_07840;Name=HMPREF2844_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07840 KV808247.1 Protein Homology CDS 23110 24240 . + 0 ID=cds-OFJ77253.1;Parent=gene-HMPREF2844_07840;Dbxref=NCBI_GP:OFJ77253.1;Name=OFJ77253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712586.1;locus_tag=HMPREF2844_07840;product=carbamoyl-phosphate synthase small subunit;protein_id=OFJ77253.1;transl_table=11 ##sequence-region KV808248.1 1 273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808248.1 Genbank region 1 273 . + . ID=KV808248.1:1..273;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808248.1 Genbank pseudogene 1 273 . + . ID=gene-HMPREF2844_07845;Name=HMPREF2844_07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07845;pseudo=true KV808248.1 GeneMarkS+ CDS 1 273 . + 2 ID=cds-HMPREF2844_07845;Parent=gene-HMPREF2844_07845;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_07845;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808249.1 1 4124 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808249.1 Genbank region 1 4124 . + . ID=KV808249.1:1..4124;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808249.1 Genbank gene 193 1719 . + . ID=gene-HMPREF2844_07850;Name=HMPREF2844_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07850 KV808249.1 Protein Homology CDS 193 1719 . + 0 ID=cds-OFJ77193.1;Parent=gene-HMPREF2844_07850;Dbxref=NCBI_GP:OFJ77193.1;Name=OFJ77193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687528.1;locus_tag=HMPREF2844_07850;product=ABC transporter permease;protein_id=OFJ77193.1;transl_table=11 KV808249.1 Genbank gene 1756 2481 . - . ID=gene-HMPREF2844_07855;Name=HMPREF2844_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07855 KV808249.1 Protein Homology CDS 1756 2481 . - 0 ID=cds-OFJ77194.1;Parent=gene-HMPREF2844_07855;Dbxref=NCBI_GP:OFJ77194.1;Name=OFJ77194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778541.1;locus_tag=HMPREF2844_07855;product=methyltransferase;protein_id=OFJ77194.1;transl_table=11 KV808249.1 Genbank gene 2616 3992 . + . ID=gene-HMPREF2844_07860;Name=HMPREF2844_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07860 KV808249.1 Protein Homology CDS 2616 3992 . + 0 ID=cds-OFJ77195.1;Parent=gene-HMPREF2844_07860;Dbxref=NCBI_GP:OFJ77195.1;Name=OFJ77195.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687526.1;locus_tag=HMPREF2844_07860;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=OFJ77195.1;transl_table=11 ##sequence-region KV808250.1 1 47915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808250.1 Genbank region 1 47915 . + . ID=KV808250.1:1..47915;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808250.1 Genbank gene 286 1038 . + . ID=gene-HMPREF2844_07865;Name=HMPREF2844_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07865 KV808250.1 Protein Homology CDS 286 1038 . + 0 ID=cds-OFJ77114.1;Parent=gene-HMPREF2844_07865;Dbxref=NCBI_GP:OFJ77114.1;Name=OFJ77114.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003772040.1;locus_tag=HMPREF2844_07865;product=hypothetical protein;protein_id=OFJ77114.1;transl_table=11 KV808250.1 Genbank gene 1064 4279 . + . ID=gene-HMPREF2844_07870;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=HMPREF2844_07870 KV808250.1 Protein Homology CDS 1064 4279 . + 0 ID=cds-OFJ77115.1;Parent=gene-HMPREF2844_07870;Dbxref=NCBI_GP:OFJ77115.1;Name=OFJ77115.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765634.1;locus_tag=HMPREF2844_07870;product=carbamoyl phosphate synthase large subunit;protein_id=OFJ77115.1;transl_table=11 KV808250.1 Genbank gene 4532 6091 . + . ID=gene-HMPREF2844_07875;Name=HMPREF2844_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07875 KV808250.1 Protein Homology CDS 4532 6091 . + 0 ID=cds-OFJ77116.1;Parent=gene-HMPREF2844_07875;Dbxref=NCBI_GP:OFJ77116.1;Name=OFJ77116.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744213.1;locus_tag=HMPREF2844_07875;product=hypothetical protein;protein_id=OFJ77116.1;transl_table=11 KV808250.1 Genbank gene 6185 7273 . - . ID=gene-HMPREF2844_07880;Name=HMPREF2844_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07880 KV808250.1 Protein Homology CDS 6185 7273 . - 0 ID=cds-OFJ77117.1;Parent=gene-HMPREF2844_07880;Dbxref=NCBI_GP:OFJ77117.1;Name=OFJ77117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282906.1;locus_tag=HMPREF2844_07880;product=beta-N-acetylhexosaminidase;protein_id=OFJ77117.1;transl_table=11 KV808250.1 Genbank gene 7344 8864 . - . ID=gene-HMPREF2844_07885;Name=HMPREF2844_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07885 KV808250.1 Protein Homology CDS 7344 8864 . - 0 ID=cds-OFJ77118.1;Parent=gene-HMPREF2844_07885;Dbxref=NCBI_GP:OFJ77118.1;Name=OFJ77118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269881.1;locus_tag=HMPREF2844_07885;product=Na+/H+ antiporter;protein_id=OFJ77118.1;transl_table=11 KV808250.1 Genbank gene 9054 10607 . - . ID=gene-HMPREF2844_07890;Name=HMPREF2844_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07890 KV808250.1 Protein Homology CDS 9054 10607 . - 0 ID=cds-OFJ77119.1;Parent=gene-HMPREF2844_07890;Dbxref=NCBI_GP:OFJ77119.1;Name=OFJ77119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269880.1;locus_tag=HMPREF2844_07890;product=protease Do;protein_id=OFJ77119.1;transl_table=11 KV808250.1 Genbank gene 10779 11411 . - . ID=gene-HMPREF2844_07895;Name=HMPREF2844_07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07895 KV808250.1 Protein Homology CDS 10779 11411 . - 0 ID=cds-OFJ77120.1;Parent=gene-HMPREF2844_07895;Dbxref=NCBI_GP:OFJ77120.1;Name=OFJ77120.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282899.1;locus_tag=HMPREF2844_07895;product=endonuclease III;protein_id=OFJ77120.1;transl_table=11 KV808250.1 Genbank gene 11575 12420 . + . ID=gene-HMPREF2844_07900;Name=HMPREF2844_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07900 KV808250.1 Protein Homology CDS 11575 12420 . + 0 ID=cds-OFJ77121.1;Parent=gene-HMPREF2844_07900;Dbxref=NCBI_GP:OFJ77121.1;Name=OFJ77121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747031.1;locus_tag=HMPREF2844_07900;product=hypothetical protein;protein_id=OFJ77121.1;transl_table=11 KV808250.1 Genbank gene 12493 14661 . - . ID=gene-HMPREF2844_07905;Name=HMPREF2844_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07905 KV808250.1 Protein Homology CDS 12493 14661 . - 0 ID=cds-OFJ77122.1;Parent=gene-HMPREF2844_07905;Dbxref=NCBI_GP:OFJ77122.1;Name=OFJ77122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231861.1;locus_tag=HMPREF2844_07905;product=primosomal protein N';protein_id=OFJ77122.1;transl_table=11 KV808250.1 Genbank gene 14799 15593 . + . ID=gene-HMPREF2844_07910;Name=HMPREF2844_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07910 KV808250.1 Protein Homology CDS 14799 15593 . + 0 ID=cds-OFJ77123.1;Parent=gene-HMPREF2844_07910;Dbxref=NCBI_GP:OFJ77123.1;Name=OFJ77123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767744.1;locus_tag=HMPREF2844_07910;product=thiol:disulfide interchange protein;protein_id=OFJ77123.1;transl_table=11 KV808250.1 Genbank gene 15694 16518 . - . ID=gene-HMPREF2844_07915;Name=HMPREF2844_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07915 KV808250.1 Protein Homology CDS 15694 16518 . - 0 ID=cds-OFJ77124.1;Parent=gene-HMPREF2844_07915;Dbxref=NCBI_GP:OFJ77124.1;Name=OFJ77124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214408.1;locus_tag=HMPREF2844_07915;product=magnesium/cobalt efflux protein;protein_id=OFJ77124.1;transl_table=11 KV808250.1 Genbank gene 16520 17035 . - . ID=gene-HMPREF2844_07920;Name=HMPREF2844_07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07920 KV808250.1 Protein Homology CDS 16520 17035 . - 0 ID=cds-OFJ77125.1;Parent=gene-HMPREF2844_07920;Dbxref=NCBI_GP:OFJ77125.1;Name=OFJ77125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A1KSE7.1;locus_tag=HMPREF2844_07920;product=rRNA maturation factor;protein_id=OFJ77125.1;transl_table=11 KV808250.1 Genbank gene 17207 17584 . + . ID=gene-HMPREF2844_07925;Name=HMPREF2844_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07925 KV808250.1 Protein Homology CDS 17207 17584 . + 0 ID=cds-OFJ77126.1;Parent=gene-HMPREF2844_07925;Dbxref=NCBI_GP:OFJ77126.1;Name=OFJ77126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764847.1;locus_tag=HMPREF2844_07925;product=hypothetical protein;protein_id=OFJ77126.1;transl_table=11 KV808250.1 Genbank gene 17631 18569 . + . ID=gene-HMPREF2844_07930;Name=HMPREF2844_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07930 KV808250.1 Protein Homology CDS 17631 18569 . + 0 ID=cds-OFJ77127.1;Parent=gene-HMPREF2844_07930;Dbxref=NCBI_GP:OFJ77127.1;Name=OFJ77127.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687247.1;locus_tag=HMPREF2844_07930;product=hydroxymethylbilane synthase;protein_id=OFJ77127.1;transl_table=11 KV808250.1 Genbank gene 18746 19915 . + . ID=gene-HMPREF2844_07935;Name=HMPREF2844_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07935 KV808250.1 Protein Homology CDS 18746 19915 . + 0 ID=cds-OFJ77128.1;Parent=gene-HMPREF2844_07935;Dbxref=NCBI_GP:OFJ77128.1;Name=OFJ77128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234138.1;locus_tag=HMPREF2844_07935;product=O-succinylhomoserine sulfhydrolase;protein_id=OFJ77128.1;transl_table=11 KV808250.1 Genbank gene 20034 20237 . + . ID=gene-HMPREF2844_07940;Name=HMPREF2844_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07940 KV808250.1 Protein Homology CDS 20034 20237 . + 0 ID=cds-OFJ77129.1;Parent=gene-HMPREF2844_07940;Dbxref=NCBI_GP:OFJ77129.1;Name=OFJ77129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212781.1;locus_tag=HMPREF2844_07940;product=hypothetical protein;protein_id=OFJ77129.1;transl_table=11 KV808250.1 Genbank gene 20725 20799 . - . ID=gene-HMPREF2844_07945;Name=HMPREF2844_07945;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_07945 KV808250.1 tRNAscan-SE tRNA 20725 20799 . - . ID=rna-HMPREF2844_07945;Parent=gene-HMPREF2844_07945;anticodon=(pos:complement(20764..20766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07945;product=tRNA-Glu KV808250.1 tRNAscan-SE exon 20725 20799 . - . ID=exon-HMPREF2844_07945-1;Parent=rna-HMPREF2844_07945;anticodon=(pos:complement(20764..20766));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07945;product=tRNA-Glu KV808250.1 Genbank gene 20817 20893 . - . ID=gene-HMPREF2844_07950;Name=HMPREF2844_07950;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_07950 KV808250.1 tRNAscan-SE tRNA 20817 20893 . - . ID=rna-HMPREF2844_07950;Parent=gene-HMPREF2844_07950;anticodon=(pos:complement(20857..20859));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07950;product=tRNA-Arg KV808250.1 tRNAscan-SE exon 20817 20893 . - . ID=exon-HMPREF2844_07950-1;Parent=rna-HMPREF2844_07950;anticodon=(pos:complement(20857..20859));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_07950;product=tRNA-Arg KV808250.1 Genbank gene 21026 22378 . - . ID=gene-HMPREF2844_07955;Name=HMPREF2844_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07955 KV808250.1 Protein Homology CDS 21026 22378 . - 0 ID=cds-OFJ77130.1;Parent=gene-HMPREF2844_07955;Dbxref=NCBI_GP:OFJ77130.1;Name=OFJ77130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761537.1;locus_tag=HMPREF2844_07955;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=OFJ77130.1;transl_table=11 KV808250.1 Genbank gene 22436 22885 . - . ID=gene-HMPREF2844_07960;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=HMPREF2844_07960 KV808250.1 Protein Homology CDS 22436 22885 . - 0 ID=cds-OFJ77131.1;Parent=gene-HMPREF2844_07960;Dbxref=NCBI_GP:OFJ77131.1;Name=OFJ77131.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269872.1;locus_tag=HMPREF2844_07960;product=ribonuclease HI;protein_id=OFJ77131.1;transl_table=11 KV808250.1 Genbank gene 23017 23877 . + . ID=gene-HMPREF2844_07965;Name=HMPREF2844_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07965 KV808250.1 Protein Homology CDS 23017 23877 . + 0 ID=cds-OFJ77132.1;Parent=gene-HMPREF2844_07965;Dbxref=NCBI_GP:OFJ77132.1;Name=OFJ77132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687251.1;locus_tag=HMPREF2844_07965;product=tellurite resistance methyltransferase TehB;protein_id=OFJ77132.1;transl_table=11 KV808250.1 Genbank gene 24246 24869 . - . ID=gene-HMPREF2844_07970;Name=HMPREF2844_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07970 KV808250.1 Protein Homology CDS 24246 24869 . - 0 ID=cds-OFJ77133.1;Parent=gene-HMPREF2844_07970;Dbxref=NCBI_GP:OFJ77133.1;Name=OFJ77133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686633.1;locus_tag=HMPREF2844_07970;product=outer membrane lipoprotein carrier protein LolA;protein_id=OFJ77133.1;transl_table=11 KV808250.1 Genbank gene 25174 26001 . + . ID=gene-HMPREF2844_07975;Name=HMPREF2844_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07975 KV808250.1 Protein Homology CDS 25174 26001 . + 0 ID=cds-OFJ77134.1;Parent=gene-HMPREF2844_07975;Dbxref=NCBI_GP:OFJ77134.1;Name=OFJ77134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755135.1;locus_tag=HMPREF2844_07975;product=hypothetical protein;protein_id=OFJ77134.1;transl_table=11 KV808250.1 Genbank gene 26047 27009 . + . ID=gene-HMPREF2844_07980;Name=HMPREF2844_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07980 KV808250.1 Protein Homology CDS 26047 27009 . + 0 ID=cds-OFJ77135.1;Parent=gene-HMPREF2844_07980;Dbxref=NCBI_GP:OFJ77135.1;Name=OFJ77135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686635.1;locus_tag=HMPREF2844_07980;product=hypothetical protein;protein_id=OFJ77135.1;transl_table=11 KV808250.1 Genbank gene 27070 27717 . + . ID=gene-HMPREF2844_07985;Name=HMPREF2844_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_07985 KV808250.1 Protein Homology CDS 27070 27717 . + 0 ID=cds-OFJ77136.1;Parent=gene-HMPREF2844_07985;Dbxref=NCBI_GP:OFJ77136.1;Name=OFJ77136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755132.1;locus_tag=HMPREF2844_07985;product=phosphoglycolate phosphatase;protein_id=OFJ77136.1;transl_table=11 KV808250.1 Genbank pseudogene 27793 29064 . - . ID=gene-HMPREF2844_07990;Name=HMPREF2844_07990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_07990;pseudo=true KV808250.1 Protein Homology CDS 27793 29064 . - 0 ID=cds-HMPREF2844_07990;Parent=gene-HMPREF2844_07990;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427490.1;locus_tag=HMPREF2844_07990;product=malic enzyme;pseudo=true;transl_table=11 KV808250.1 Genbank gene 29282 29908 . - . ID=gene-HMPREF2844_07995;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=HMPREF2844_07995 KV808250.1 Protein Homology CDS 29282 29908 . - 0 ID=cds-OFJ77137.1;Parent=gene-HMPREF2844_07995;Dbxref=NCBI_GP:OFJ77137.1;Name=OFJ77137.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;gene=tmk;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747283.1;locus_tag=HMPREF2844_07995;product=thymidylate kinase;protein_id=OFJ77137.1;transl_table=11 KV808250.1 Genbank gene 30338 30973 . + . ID=gene-HMPREF2844_08000;Name=HMPREF2844_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08000 KV808250.1 Protein Homology CDS 30338 30973 . + 0 ID=cds-OFJ77138.1;Parent=gene-HMPREF2844_08000;Dbxref=NCBI_GP:OFJ77138.1;Name=OFJ77138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686639.1;locus_tag=HMPREF2844_08000;product=spore coat protein SpoU;protein_id=OFJ77138.1;transl_table=11 KV808250.1 Genbank gene 31013 31738 . + . ID=gene-HMPREF2844_08005;Name=HMPREF2844_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08005 KV808250.1 Protein Homology CDS 31013 31738 . + 0 ID=cds-OFJ77139.1;Parent=gene-HMPREF2844_08005;Dbxref=NCBI_GP:OFJ77139.1;Name=OFJ77139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686640.1;locus_tag=HMPREF2844_08005;product=phytochrome sensor protein;protein_id=OFJ77139.1;transl_table=11 KV808250.1 Genbank gene 31776 34193 . + . ID=gene-HMPREF2844_08010;Name=HMPREF2844_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08010 KV808250.1 Protein Homology CDS 31776 34193 . + 0 ID=cds-OFJ77140.1;Parent=gene-HMPREF2844_08010;Dbxref=NCBI_GP:OFJ77140.1;Name=OFJ77140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761658.1;locus_tag=HMPREF2844_08010;product=protein CsuD;protein_id=OFJ77140.1;transl_table=11 KV808250.1 Genbank gene 34184 35314 . + . ID=gene-HMPREF2844_08015;Name=HMPREF2844_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08015 KV808250.1 Protein Homology CDS 34184 35314 . + 0 ID=cds-OFJ77141.1;Parent=gene-HMPREF2844_08015;Dbxref=NCBI_GP:OFJ77141.1;Name=OFJ77141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311056.1;locus_tag=HMPREF2844_08015;product=hypothetical protein;protein_id=OFJ77141.1;transl_table=11 KV808250.1 Genbank gene 35513 36391 . + . ID=gene-HMPREF2844_08020;Name=HMPREF2844_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08020 KV808250.1 Protein Homology CDS 35513 36391 . + 0 ID=cds-OFJ77152.1;Parent=gene-HMPREF2844_08020;Dbxref=NCBI_GP:OFJ77152.1;Name=OFJ77152.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815766.1;locus_tag=HMPREF2844_08020;product=hydroxyacid dehydrogenase;protein_id=OFJ77152.1;transl_table=11 KV808250.1 Genbank gene 36531 37532 . + . ID=gene-HMPREF2844_08025;Name=HMPREF2844_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08025 KV808250.1 Protein Homology CDS 36531 37532 . + 0 ID=cds-OFJ77142.1;Parent=gene-HMPREF2844_08025;Dbxref=NCBI_GP:OFJ77142.1;Name=OFJ77142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686644.1;locus_tag=HMPREF2844_08025;product=polysaccharide biosynthesis protein GumN;protein_id=OFJ77142.1;transl_table=11 KV808250.1 Genbank gene 37647 38285 . + . ID=gene-HMPREF2844_08030;Name=HMPREF2844_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08030 KV808250.1 Protein Homology CDS 37647 38285 . + 0 ID=cds-OFJ77143.1;Parent=gene-HMPREF2844_08030;Dbxref=NCBI_GP:OFJ77143.1;Name=OFJ77143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684901.1;locus_tag=HMPREF2844_08030;product=alpha/beta hydrolase;protein_id=OFJ77143.1;transl_table=11 KV808250.1 Genbank gene 38696 40681 . - . ID=gene-HMPREF2844_08035;Name=HMPREF2844_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08035 KV808250.1 Protein Homology CDS 38696 40681 . - 0 ID=cds-OFJ77144.1;Parent=gene-HMPREF2844_08035;Dbxref=NCBI_GP:OFJ77144.1;Name=OFJ77144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448597.1;locus_tag=HMPREF2844_08035;product=DNA topoisomerase IV subunit B;protein_id=OFJ77144.1;transl_table=11 KV808250.1 Genbank gene 40751 41275 . - . ID=gene-HMPREF2844_08040;Name=HMPREF2844_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08040 KV808250.1 Protein Homology CDS 40751 41275 . - 0 ID=cds-OFJ77145.1;Parent=gene-HMPREF2844_08040;Dbxref=NCBI_GP:OFJ77145.1;Name=OFJ77145.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580979.1;locus_tag=HMPREF2844_08040;product=RNA pyrophosphohydrolase;protein_id=OFJ77145.1;transl_table=11 KV808250.1 Genbank gene 41622 42416 . + . ID=gene-HMPREF2844_08045;Name=HMPREF2844_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08045 KV808250.1 Protein Homology CDS 41622 42416 . + 0 ID=cds-OFJ77146.1;Parent=gene-HMPREF2844_08045;Dbxref=NCBI_GP:OFJ77146.1;Name=OFJ77146.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269855.1;locus_tag=HMPREF2844_08045;product=transporter;protein_id=OFJ77146.1;transl_table=11 KV808250.1 Genbank gene 42540 44039 . + . ID=gene-HMPREF2844_08050;Name=HMPREF2844_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08050 KV808250.1 Protein Homology CDS 42540 44039 . + 0 ID=cds-OFJ77147.1;Parent=gene-HMPREF2844_08050;Dbxref=NCBI_GP:OFJ77147.1;Name=OFJ77147.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686649.1;locus_tag=HMPREF2844_08050;product=alpha/beta hydrolase;protein_id=OFJ77147.1;transl_table=11 KV808250.1 Genbank gene 44115 45506 . - . ID=gene-HMPREF2844_08055;Name=HMPREF2844_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08055 KV808250.1 Protein Homology CDS 44115 45506 . - 0 ID=cds-OFJ77148.1;Parent=gene-HMPREF2844_08055;Dbxref=NCBI_GP:OFJ77148.1;Name=OFJ77148.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215475.1;locus_tag=HMPREF2844_08055;product=transporter;protein_id=OFJ77148.1;transl_table=11 KV808250.1 Genbank gene 45935 46303 . - . ID=gene-HMPREF2844_08060;Name=HMPREF2844_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08060 KV808250.1 Protein Homology CDS 45935 46303 . - 0 ID=cds-OFJ77149.1;Parent=gene-HMPREF2844_08060;Dbxref=NCBI_GP:OFJ77149.1;Name=OFJ77149.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520630.1;locus_tag=HMPREF2844_08060;product=Co2+/Mg2+ efflux protein ApaG;protein_id=OFJ77149.1;transl_table=11 KV808250.1 Genbank gene 46408 46896 . - . ID=gene-HMPREF2844_08065;Name=HMPREF2844_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08065 KV808250.1 Protein Homology CDS 46408 46896 . - 0 ID=cds-OFJ77150.1;Parent=gene-HMPREF2844_08065;Dbxref=NCBI_GP:OFJ77150.1;Name=OFJ77150.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688180.1;locus_tag=HMPREF2844_08065;product=phosphatidylglycerophosphatase;protein_id=OFJ77150.1;transl_table=11 KV808250.1 Genbank gene 46889 47845 . - . ID=gene-HMPREF2844_08070;Name=HMPREF2844_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08070 KV808250.1 Protein Homology CDS 46889 47845 . - 0 ID=cds-OFJ77151.1;Parent=gene-HMPREF2844_08070;Dbxref=NCBI_GP:OFJ77151.1;Name=OFJ77151.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003709886.1;locus_tag=HMPREF2844_08070;product=thiamine-monophosphate kinase;protein_id=OFJ77151.1;transl_table=11 ##sequence-region KV808251.1 1 8397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808251.1 Genbank region 1 8397 . + . ID=KV808251.1:1..8397;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808251.1 Genbank gene 54 596 . - . ID=gene-HMPREF2844_08075;Name=HMPREF2844_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08075 KV808251.1 Protein Homology CDS 54 596 . - 0 ID=cds-OFJ77057.1;Parent=gene-HMPREF2844_08075;Dbxref=NCBI_GP:OFJ77057.1;Name=OFJ77057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237666.1;locus_tag=HMPREF2844_08075;product=suppressor of fused family protein;protein_id=OFJ77057.1;transl_table=11 KV808251.1 Genbank gene 598 2409 . - . ID=gene-HMPREF2844_08080;Name=HMPREF2844_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08080 KV808251.1 Protein Homology CDS 598 2409 . - 0 ID=cds-OFJ77049.1;Parent=gene-HMPREF2844_08080;Dbxref=NCBI_GP:OFJ77049.1;Name=OFJ77049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575159.1;locus_tag=HMPREF2844_08080;product=septum formation inhibitor Maf;protein_id=OFJ77049.1;transl_table=11 KV808251.1 Genbank gene 2413 3363 . - . ID=gene-HMPREF2844_08085;Name=HMPREF2844_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08085 KV808251.1 Protein Homology CDS 2413 3363 . - 0 ID=cds-OFJ77050.1;Parent=gene-HMPREF2844_08085;Dbxref=NCBI_GP:OFJ77050.1;Name=OFJ77050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687862.1;locus_tag=HMPREF2844_08085;product=adhesin;protein_id=OFJ77050.1;transl_table=11 KV808251.1 Genbank gene 3532 3780 . - . ID=gene-HMPREF2844_08090;Name=HMPREF2844_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08090 KV808251.1 Protein Homology CDS 3532 3780 . - 0 ID=cds-OFJ77051.1;Parent=gene-HMPREF2844_08090;Dbxref=NCBI_GP:OFJ77051.1;Name=OFJ77051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312518.1;locus_tag=HMPREF2844_08090;product=methionine-binding protein;protein_id=OFJ77051.1;transl_table=11 KV808251.1 Genbank gene 4067 5068 . - . ID=gene-HMPREF2844_08095;Name=HMPREF2844_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08095 KV808251.1 Protein Homology CDS 4067 5068 . - 0 ID=cds-OFJ77052.1;Parent=gene-HMPREF2844_08095;Dbxref=NCBI_GP:OFJ77052.1;Name=OFJ77052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766204.1;locus_tag=HMPREF2844_08095;product=ABC transporter substrate-binding protein;protein_id=OFJ77052.1;transl_table=11 KV808251.1 Genbank gene 5131 5787 . + . ID=gene-HMPREF2844_08100;Name=HMPREF2844_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08100 KV808251.1 Protein Homology CDS 5131 5787 . + 0 ID=cds-OFJ77053.1;Parent=gene-HMPREF2844_08100;Dbxref=NCBI_GP:OFJ77053.1;Name=OFJ77053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766210.1;locus_tag=HMPREF2844_08100;product=hydrolase;protein_id=OFJ77053.1;transl_table=11 KV808251.1 Genbank gene 5850 6140 . + . ID=gene-HMPREF2844_08105;Name=HMPREF2844_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08105 KV808251.1 Protein Homology CDS 5850 6140 . + 0 ID=cds-OFJ77054.1;Parent=gene-HMPREF2844_08105;Dbxref=NCBI_GP:OFJ77054.1;Name=OFJ77054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271572.1;locus_tag=HMPREF2844_08105;product=spore cortex protein;protein_id=OFJ77054.1;transl_table=11 KV808251.1 Genbank gene 6248 6439 . + . ID=gene-HMPREF2844_08110;Name=HMPREF2844_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08110 KV808251.1 Protein Homology CDS 6248 6439 . + 0 ID=cds-OFJ77055.1;Parent=gene-HMPREF2844_08110;Dbxref=NCBI_GP:OFJ77055.1;Name=OFJ77055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271573.1;locus_tag=HMPREF2844_08110;product=hypothetical protein;protein_id=OFJ77055.1;transl_table=11 KV808251.1 Genbank gene 6555 7928 . + . ID=gene-HMPREF2844_08115;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF2844_08115 KV808251.1 Protein Homology CDS 6555 7928 . + 0 ID=cds-OFJ77056.1;Parent=gene-HMPREF2844_08115;Dbxref=NCBI_GP:OFJ77056.1;Name=OFJ77056.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687856.1;locus_tag=HMPREF2844_08115;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=OFJ77056.1;transl_table=11 ##sequence-region KV808252.1 1 20360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808252.1 Genbank region 1 20360 . + . ID=KV808252.1:1..20360;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808252.1 Genbank gene 59 2683 . - . ID=gene-HMPREF2844_08120;Name=HMPREF2844_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08120 KV808252.1 Protein Homology CDS 59 2683 . - 0 ID=cds-OFJ77043.1;Parent=gene-HMPREF2844_08120;Dbxref=NCBI_GP:OFJ77043.1;Name=OFJ77043.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761010.1;locus_tag=HMPREF2844_08120;product=DNA mismatch repair protein MutS;protein_id=OFJ77043.1;transl_table=11 KV808252.1 Genbank gene 2792 3709 . - . ID=gene-HMPREF2844_08125;Name=HMPREF2844_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08125 KV808252.1 Protein Homology CDS 2792 3709 . - 0 ID=cds-OFJ77044.1;Parent=gene-HMPREF2844_08125;Dbxref=NCBI_GP:OFJ77044.1;Name=OFJ77044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P95357.1;locus_tag=HMPREF2844_08125;product=cell division protein FtsX;protein_id=OFJ77044.1;transl_table=11 KV808252.1 Genbank gene 3706 4356 . - . ID=gene-HMPREF2844_08130;Name=HMPREF2844_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08130 KV808252.1 Protein Homology CDS 3706 4356 . - 0 ID=cds-OFJ77045.1;Parent=gene-HMPREF2844_08130;Dbxref=NCBI_GP:OFJ77045.1;Name=OFJ77045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002242116.1;locus_tag=HMPREF2844_08130;product=cell division ATP-binding protein FtsE;protein_id=OFJ77045.1;transl_table=11 KV808252.1 Genbank gene 4690 5172 . - . ID=gene-HMPREF2844_08135;Name=HMPREF2844_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08135 KV808252.1 Protein Homology CDS 4690 5172 . - 0 ID=cds-OFJ77046.1;Parent=gene-HMPREF2844_08135;Dbxref=NCBI_GP:OFJ77046.1;Name=OFJ77046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710797.1;locus_tag=HMPREF2844_08135;product=thioredoxin;protein_id=OFJ77046.1;transl_table=11 KV808252.1 Genbank gene 5362 5721 . + . ID=gene-HMPREF2844_08140;Name=HMPREF2844_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08140 KV808252.1 Protein Homology CDS 5362 5721 . + 0 ID=cds-OFJ77047.1;Parent=gene-HMPREF2844_08140;Dbxref=NCBI_GP:OFJ77047.1;Name=OFJ77047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003775959.1;locus_tag=HMPREF2844_08140;product=arsenate reductase (glutaredoxin);protein_id=OFJ77047.1;transl_table=11 KV808252.1 Genbank gene 5744 6418 . + . ID=gene-HMPREF2844_08145;Name=HMPREF2844_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08145 KV808252.1 Protein Homology CDS 5744 6418 . + 0 ID=cds-OFJ77048.1;Parent=gene-HMPREF2844_08145;Dbxref=NCBI_GP:OFJ77048.1;Name=OFJ77048.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313095.1;locus_tag=HMPREF2844_08145;product=multidrug MFS transporter;protein_id=OFJ77048.1;transl_table=11 KV808252.1 Genbank gene 6951 7535 . - . ID=gene-HMPREF2844_08150;Name=HMPREF2844_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08150 KV808252.1 Protein Homology CDS 6951 7535 . - 0 ID=cds-OFJ77018.1;Parent=gene-HMPREF2844_08150;Dbxref=NCBI_GP:OFJ77018.1;Name=OFJ77018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002226947.1;locus_tag=HMPREF2844_08150;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=OFJ77018.1;transl_table=11 KV808252.1 Genbank gene 7627 8991 . - . ID=gene-HMPREF2844_08155;Name=HMPREF2844_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08155 KV808252.1 Protein Homology CDS 7627 8991 . - 0 ID=cds-OFJ77019.1;Parent=gene-HMPREF2844_08155;Dbxref=NCBI_GP:OFJ77019.1;Name=OFJ77019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779690.1;locus_tag=HMPREF2844_08155;product=tRNA modification GTPase;protein_id=OFJ77019.1;transl_table=11 KV808252.1 Genbank gene 9596 10774 . + . ID=gene-HMPREF2844_08160;Name=HMPREF2844_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08160 KV808252.1 Protein Homology CDS 9596 10774 . + 0 ID=cds-OFJ77020.1;Parent=gene-HMPREF2844_08160;Dbxref=NCBI_GP:OFJ77020.1;Name=OFJ77020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014573670.1;locus_tag=HMPREF2844_08160;product=phosphoglycerate kinase;protein_id=OFJ77020.1;transl_table=11 KV808252.1 Genbank gene 10849 11265 . - . ID=gene-HMPREF2844_08165;Name=HMPREF2844_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08165 KV808252.1 Protein Homology CDS 10849 11265 . - 0 ID=cds-OFJ77026.1;Parent=gene-HMPREF2844_08165;Dbxref=NCBI_GP:OFJ77026.1;Name=OFJ77026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684623.1;locus_tag=HMPREF2844_08165;product=hypothetical protein;protein_id=OFJ77026.1;transl_table=11 KV808252.1 Genbank gene 11302 12198 . - . ID=gene-HMPREF2844_08170;Name=HMPREF2844_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08170 KV808252.1 Protein Homology CDS 11302 12198 . - 0 ID=cds-OFJ77021.1;Parent=gene-HMPREF2844_08170;Dbxref=NCBI_GP:OFJ77021.1;Name=OFJ77021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269957.1;locus_tag=HMPREF2844_08170;product=geranyl transferase;protein_id=OFJ77021.1;transl_table=11 KV808252.1 Genbank gene 12182 12406 . - . ID=gene-HMPREF2844_08175;Name=HMPREF2844_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08175 KV808252.1 Protein Homology CDS 12182 12406 . - 0 ID=cds-OFJ77022.1;Parent=gene-HMPREF2844_08175;Dbxref=NCBI_GP:OFJ77022.1;Name=OFJ77022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312554.1;locus_tag=HMPREF2844_08175;product=exodeoxyribonuclease VII small subunit;protein_id=OFJ77022.1;transl_table=11 KV808252.1 Genbank gene 12543 13166 . - . ID=gene-HMPREF2844_08180;Name=HMPREF2844_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08180 KV808252.1 Protein Homology CDS 12543 13166 . - 0 ID=cds-OFJ77027.1;Parent=gene-HMPREF2844_08180;Dbxref=NCBI_GP:OFJ77027.1;Name=OFJ77027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744461.1;locus_tag=HMPREF2844_08180;product=ABC transporter substrate-binding protein;protein_id=OFJ77027.1;transl_table=11 KV808252.1 Genbank gene 14804 15165 . + . ID=gene-HMPREF2844_08185;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF2844_08185 KV808252.1 cmsearch RNase_P_RNA 14804 15165 . + . ID=rna-HMPREF2844_08185;Parent=gene-HMPREF2844_08185;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_08185;product=RNase P RNA component class A KV808252.1 cmsearch exon 14804 15165 . + . ID=exon-HMPREF2844_08185-1;Parent=rna-HMPREF2844_08185;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_08185;product=RNase P RNA component class A KV808252.1 Genbank gene 15364 16821 . + . ID=gene-HMPREF2844_08190;Name=HMPREF2844_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08190 KV808252.1 Protein Homology CDS 15364 16821 . + 0 ID=cds-OFJ77023.1;Parent=gene-HMPREF2844_08190;Dbxref=NCBI_GP:OFJ77023.1;Name=OFJ77023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686806.1;locus_tag=HMPREF2844_08190;product=MFS transporter;protein_id=OFJ77023.1;transl_table=11 KV808252.1 Genbank gene 16918 17385 . - . ID=gene-HMPREF2844_08195;Name=HMPREF2844_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08195 KV808252.1 Protein Homology CDS 16918 17385 . - 0 ID=cds-OFJ77024.1;Parent=gene-HMPREF2844_08195;Dbxref=NCBI_GP:OFJ77024.1;Name=OFJ77024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747688.1;locus_tag=HMPREF2844_08195;product=damage-inducible protein CinA;protein_id=OFJ77024.1;transl_table=11 KV808252.1 Genbank gene 17514 17876 . - . ID=gene-HMPREF2844_08200;Name=HMPREF2844_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08200 KV808252.1 Protein Homology CDS 17514 17876 . - 0 ID=cds-OFJ77025.1;Parent=gene-HMPREF2844_08200;Dbxref=NCBI_GP:OFJ77025.1;Name=OFJ77025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270767.1;locus_tag=HMPREF2844_08200;product=cupin;protein_id=OFJ77025.1;transl_table=11 KV808252.1 Genbank gene 18511 19488 . - . ID=gene-HMPREF2844_08205;Name=HMPREF2844_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08205 KV808252.1 Protein Homology CDS 18511 19488 . - 0 ID=cds-OFJ77028.1;Parent=gene-HMPREF2844_08205;Dbxref=NCBI_GP:OFJ77028.1;Name=OFJ77028.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769247.1;locus_tag=HMPREF2844_08205;product=iron ABC transporter substrate-binding protein;protein_id=OFJ77028.1;transl_table=11 KV808252.1 Genbank pseudogene 19724 20360 . + . ID=gene-HMPREF2844_08210;Name=HMPREF2844_08210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08210;pseudo=true KV808252.1 Protein Homology CDS 19724 20360 . + 0 ID=cds-HMPREF2844_08210;Parent=gene-HMPREF2844_08210;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227655.1;locus_tag=HMPREF2844_08210;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region KV808253.1 1 223 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808253.1 Genbank region 1 223 . + . ID=KV808253.1:1..223;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808253.1 Genbank pseudogene 1 223 . + . ID=gene-HMPREF2844_08215;Name=HMPREF2844_08215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08215;pseudo=true KV808253.1 GeneMarkS+ CDS 1 223 . + 0 ID=cds-HMPREF2844_08215;Parent=gene-HMPREF2844_08215;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_08215;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808254.1 1 3591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808254.1 Genbank region 1 3591 . + . ID=KV808254.1:1..3591;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808254.1 Genbank pseudogene 1 248 . + . ID=gene-HMPREF2844_08220;Name=HMPREF2844_08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08220;pseudo=true KV808254.1 Protein Homology CDS 1 248 . + 2 ID=cds-HMPREF2844_08220;Parent=gene-HMPREF2844_08220;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756627.1;locus_tag=HMPREF2844_08220;product=phosphoesterase;pseudo=true;transl_table=11 KV808254.1 Genbank pseudogene 952 1404 . - . ID=gene-HMPREF2844_08225;Name=HMPREF2844_08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08225;pseudo=true KV808254.1 Protein Homology CDS 952 1404 . - 2 ID=cds-HMPREF2844_08225;Parent=gene-HMPREF2844_08225;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764164.1;locus_tag=HMPREF2844_08225;product=hypothetical protein;pseudo=true;transl_table=11 KV808254.1 Genbank gene 1716 2102 . - . ID=gene-HMPREF2844_08230;Name=HMPREF2844_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08230 KV808254.1 Protein Homology CDS 1716 2102 . - 0 ID=cds-OFJ76868.1;Parent=gene-HMPREF2844_08230;Dbxref=NCBI_GP:OFJ76868.1;Name=OFJ76868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006148295.1;locus_tag=HMPREF2844_08230;product=hypothetical protein;protein_id=OFJ76868.1;transl_table=11 KV808254.1 Genbank pseudogene 2568 2843 . - . ID=gene-HMPREF2844_08235;Name=HMPREF2844_08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08235;pseudo=true KV808254.1 Protein Homology CDS 2568 2843 . - 0 ID=cds-HMPREF2844_08235;Parent=gene-HMPREF2844_08235;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767887.1;locus_tag=HMPREF2844_08235;product=hypothetical protein;pseudo=true;transl_table=11 KV808254.1 Genbank gene 3059 3535 . - . ID=gene-HMPREF2844_08240;Name=HMPREF2844_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08240 KV808254.1 Protein Homology CDS 3059 3535 . - 0 ID=cds-OFJ76869.1;Parent=gene-HMPREF2844_08240;Dbxref=NCBI_GP:OFJ76869.1;Name=OFJ76869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006148337.1;locus_tag=HMPREF2844_08240;product=hypothetical protein;protein_id=OFJ76869.1;transl_table=11 ##sequence-region KV808255.1 1 32141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808255.1 Genbank region 1 32141 . + . ID=KV808255.1:1..32141;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808255.1 Genbank gene 189 944 . - . ID=gene-HMPREF2844_08245;Name=HMPREF2844_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08245 KV808255.1 Protein Homology CDS 189 944 . - 0 ID=cds-OFJ76851.1;Parent=gene-HMPREF2844_08245;Dbxref=NCBI_GP:OFJ76851.1;Name=OFJ76851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745813.1;locus_tag=HMPREF2844_08245;product=hypothetical protein;protein_id=OFJ76851.1;transl_table=11 KV808255.1 Genbank gene 1365 2573 . - . ID=gene-HMPREF2844_08250;Name=HMPREF2844_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08250 KV808255.1 Protein Homology CDS 1365 2573 . - 0 ID=cds-OFJ76852.1;Parent=gene-HMPREF2844_08250;Dbxref=NCBI_GP:OFJ76852.1;Name=OFJ76852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764092.1;locus_tag=HMPREF2844_08250;product=nitrite reductase%2C copper-containing;protein_id=OFJ76852.1;transl_table=11 KV808255.1 Genbank gene 3040 5295 . + . ID=gene-HMPREF2844_08255;Name=HMPREF2844_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08255 KV808255.1 Protein Homology CDS 3040 5295 . + 0 ID=cds-OFJ76853.1;Parent=gene-HMPREF2844_08255;Dbxref=NCBI_GP:OFJ76853.1;Name=OFJ76853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270995.1;locus_tag=HMPREF2844_08255;product=nitric oxide reductase large subunit;protein_id=OFJ76853.1;transl_table=11 KV808255.1 Genbank pseudogene 5584 6839 . - . ID=gene-HMPREF2844_08260;Name=HMPREF2844_08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08260;pseudo=true KV808255.1 Protein Homology CDS 5584 6839 . - 0 ID=cds-HMPREF2844_08260;Parent=gene-HMPREF2844_08260;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687796.1;locus_tag=HMPREF2844_08260;product=hypothetical protein;pseudo=true;transl_table=11 KV808255.1 Genbank gene 7075 9492 . - . ID=gene-HMPREF2844_08265;Name=HMPREF2844_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08265 KV808255.1 Protein Homology CDS 7075 9492 . - 0 ID=cds-OFJ76538.1;Parent=gene-HMPREF2844_08265;Dbxref=NCBI_GP:OFJ76538.1;Name=OFJ76538.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685034.1;locus_tag=HMPREF2844_08265;product=ligand-gated channel protein;protein_id=OFJ76538.1;transl_table=11 KV808255.1 Genbank gene 9547 10539 . - . ID=gene-HMPREF2844_08270;Name=HMPREF2844_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08270 KV808255.1 Protein Homology CDS 9547 10539 . - 0 ID=cds-OFJ76539.1;Parent=gene-HMPREF2844_08270;Dbxref=NCBI_GP:OFJ76539.1;Name=OFJ76539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684889.1;locus_tag=HMPREF2844_08270;product=hemoglobin-haptoglobin-utilization protein;protein_id=OFJ76539.1;transl_table=11 KV808255.1 Genbank gene 11104 12645 . + . ID=gene-HMPREF2844_08275;Name=HMPREF2844_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08275 KV808255.1 Protein Homology CDS 11104 12645 . + 0 ID=cds-OFJ76540.1;Parent=gene-HMPREF2844_08275;Dbxref=NCBI_GP:OFJ76540.1;Name=OFJ76540.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687087.1;locus_tag=HMPREF2844_08275;product=hypothetical protein;protein_id=OFJ76540.1;transl_table=11 KV808255.1 Genbank gene 12872 13363 . + . ID=gene-HMPREF2844_08280;Name=HMPREF2844_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08280 KV808255.1 Protein Homology CDS 12872 13363 . + 0 ID=cds-OFJ76545.1;Parent=gene-HMPREF2844_08280;Dbxref=NCBI_GP:OFJ76545.1;Name=OFJ76545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232005.1;locus_tag=HMPREF2844_08280;product=transcription elongation factor GreB;protein_id=OFJ76545.1;transl_table=11 KV808255.1 Genbank gene 13477 13746 . - . ID=gene-HMPREF2844_08285;Name=HMPREF2844_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08285 KV808255.1 Protein Homology CDS 13477 13746 . - 0 ID=cds-OFJ76541.1;Parent=gene-HMPREF2844_08285;Dbxref=NCBI_GP:OFJ76541.1;Name=OFJ76541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217790.1;locus_tag=HMPREF2844_08285;product=30S ribosomal protein S15;protein_id=OFJ76541.1;transl_table=11 KV808255.1 Genbank gene 14234 14719 . + . ID=gene-HMPREF2844_08290;Name=HMPREF2844_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08290 KV808255.1 Protein Homology CDS 14234 14719 . + 0 ID=cds-OFJ76542.1;Parent=gene-HMPREF2844_08290;Dbxref=NCBI_GP:OFJ76542.1;Name=OFJ76542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312333.1;locus_tag=HMPREF2844_08290;product=disulfide bond formation protein DsbB;protein_id=OFJ76542.1;transl_table=11 KV808255.1 Genbank gene 14781 16199 . - . ID=gene-HMPREF2844_08295;Name=HMPREF2844_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08295 KV808255.1 Protein Homology CDS 14781 16199 . - 0 ID=cds-OFJ76543.1;Parent=gene-HMPREF2844_08295;Dbxref=NCBI_GP:OFJ76543.1;Name=OFJ76543.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756460.1;locus_tag=HMPREF2844_08295;product=alanine glycine permease;protein_id=OFJ76543.1;transl_table=11 KV808255.1 Genbank gene 16570 17298 . + . ID=gene-HMPREF2844_08300;Name=HMPREF2844_08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08300 KV808255.1 Protein Homology CDS 16570 17298 . + 0 ID=cds-OFJ76544.1;Parent=gene-HMPREF2844_08300;Dbxref=NCBI_GP:OFJ76544.1;Name=OFJ76544.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285004.1;locus_tag=HMPREF2844_08300;product=hypothetical protein;protein_id=OFJ76544.1;transl_table=11 KV808255.1 Genbank gene 17998 18897 . + . ID=gene-HMPREF2844_08305;Name=HMPREF2844_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08305 KV808255.1 Protein Homology CDS 17998 18897 . + 0 ID=cds-OFJ76527.1;Parent=gene-HMPREF2844_08305;Dbxref=NCBI_GP:OFJ76527.1;Name=OFJ76527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270985.1;locus_tag=HMPREF2844_08305;product=ABC transporter substrate-binding protein;protein_id=OFJ76527.1;transl_table=11 KV808255.1 Genbank gene 19303 19584 . + . ID=gene-HMPREF2844_08310;Name=HMPREF2844_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08310 KV808255.1 Protein Homology CDS 19303 19584 . + 0 ID=cds-OFJ76528.1;Parent=gene-HMPREF2844_08310;Dbxref=NCBI_GP:OFJ76528.1;Name=OFJ76528.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271464.1;locus_tag=HMPREF2844_08310;product=hypothetical protein;protein_id=OFJ76528.1;transl_table=11 KV808255.1 Genbank gene 19601 19975 . + . ID=gene-HMPREF2844_08315;Name=HMPREF2844_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08315 KV808255.1 Protein Homology CDS 19601 19975 . + 0 ID=cds-OFJ76529.1;Parent=gene-HMPREF2844_08315;Dbxref=NCBI_GP:OFJ76529.1;Name=OFJ76529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271465.1;locus_tag=HMPREF2844_08315;product=hypothetical protein;protein_id=OFJ76529.1;transl_table=11 KV808255.1 Genbank gene 20181 20597 . + . ID=gene-HMPREF2844_08320;Name=HMPREF2844_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08320 KV808255.1 GeneMarkS+ CDS 20181 20597 . + 0 ID=cds-OFJ76530.1;Parent=gene-HMPREF2844_08320;Dbxref=NCBI_GP:OFJ76530.1;Name=OFJ76530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_08320;product=hypothetical protein;protein_id=OFJ76530.1;transl_table=11 KV808255.1 Genbank gene 20791 22452 . + . ID=gene-HMPREF2844_08325;Name=HMPREF2844_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08325 KV808255.1 Protein Homology CDS 20791 22452 . + 0 ID=cds-OFJ76531.1;Parent=gene-HMPREF2844_08325;Dbxref=NCBI_GP:OFJ76531.1;Name=OFJ76531.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002236772.1;locus_tag=HMPREF2844_08325;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=OFJ76531.1;transl_table=11 KV808255.1 Genbank gene 22839 26672 . - . ID=gene-HMPREF2844_08330;Name=HMPREF2844_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08330 KV808255.1 Protein Homology CDS 22839 26672 . - 0 ID=cds-OFJ76532.1;Parent=gene-HMPREF2844_08330;Dbxref=NCBI_GP:OFJ76532.1;Name=OFJ76532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951146.1;locus_tag=HMPREF2844_08330;product=FAD-linked oxidase;protein_id=OFJ76532.1;transl_table=11 KV808255.1 Genbank gene 27111 27207 . + . ID=gene-HMPREF2844_08335;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=HMPREF2844_08335 KV808255.1 cmsearch SRP_RNA 27111 27207 . + . ID=rna-HMPREF2844_08335;Parent=gene-HMPREF2844_08335;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_08335;product=signal recognition particle sRNA small type KV808255.1 cmsearch exon 27111 27207 . + . ID=exon-HMPREF2844_08335-1;Parent=rna-HMPREF2844_08335;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_08335;product=signal recognition particle sRNA small type KV808255.1 Genbank gene 27453 27674 . - . ID=gene-HMPREF2844_08340;Name=HMPREF2844_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08340 KV808255.1 Protein Homology CDS 27453 27674 . - 0 ID=cds-OFJ76469.1;Parent=gene-HMPREF2844_08340;Dbxref=NCBI_GP:OFJ76469.1;Name=OFJ76469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686624.1;locus_tag=HMPREF2844_08340;product=hypothetical protein;protein_id=OFJ76469.1;transl_table=11 KV808255.1 Genbank gene 28174 29865 . + . ID=gene-HMPREF2844_08345;Name=HMPREF2844_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08345 KV808255.1 Protein Homology CDS 28174 29865 . + 0 ID=cds-OFJ76470.1;Parent=gene-HMPREF2844_08345;Dbxref=NCBI_GP:OFJ76470.1;Name=OFJ76470.1;Note=component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003688490.1;locus_tag=HMPREF2844_08345;product=D-lactate dehydrogenase;protein_id=OFJ76470.1;transl_table=11 KV808255.1 Genbank gene 30047 30595 . + . ID=gene-HMPREF2844_08350;Name=HMPREF2844_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08350 KV808255.1 Protein Homology CDS 30047 30595 . + 0 ID=cds-OFJ76471.1;Parent=gene-HMPREF2844_08350;Dbxref=NCBI_GP:OFJ76471.1;Name=OFJ76471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002236926.1;locus_tag=HMPREF2844_08350;product=alkylhydroperoxidase;protein_id=OFJ76471.1;transl_table=11 KV808255.1 Genbank gene 30749 31837 . + . ID=gene-HMPREF2844_08355;Name=HMPREF2844_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08355 KV808255.1 Protein Homology CDS 30749 31837 . + 0 ID=cds-OFJ76472.1;Parent=gene-HMPREF2844_08355;Dbxref=NCBI_GP:OFJ76472.1;Name=OFJ76472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003751739.1;locus_tag=HMPREF2844_08355;product=acyl-CoA dehydrogenase;protein_id=OFJ76472.1;transl_table=11 KV808255.1 Genbank gene 31925 32095 . + . ID=gene-HMPREF2844_08360;Name=HMPREF2844_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08360 KV808255.1 Protein Homology CDS 31925 32095 . + 0 ID=cds-OFJ76473.1;Parent=gene-HMPREF2844_08360;Dbxref=NCBI_GP:OFJ76473.1;Name=OFJ76473.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744701.1;locus_tag=HMPREF2844_08360;product=rubredoxin;protein_id=OFJ76473.1;transl_table=11 ##sequence-region KV808256.1 1 227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808256.1 Genbank region 1 227 . + . ID=KV808256.1:1..227;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808256.1 Genbank pseudogene 1 227 . - . ID=gene-HMPREF2844_08365;Name=HMPREF2844_08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08365;pseudo=true KV808256.1 GeneMarkS+ CDS 1 227 . - 0 ID=cds-HMPREF2844_08365;Parent=gene-HMPREF2844_08365;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_08365;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808257.1 1 72622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808257.1 Genbank region 1 72622 . + . ID=KV808257.1:1..72622;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808257.1 Genbank pseudogene 1 250 . + . ID=gene-HMPREF2844_08370;Name=HMPREF2844_08370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08370;pseudo=true KV808257.1 Protein Homology CDS 1 250 . + 1 ID=cds-HMPREF2844_08370;Parent=gene-HMPREF2844_08370;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269932.1;locus_tag=HMPREF2844_08370;product=transposase;pseudo=true;transl_table=11 KV808257.1 Genbank gene 882 2039 . + . ID=gene-HMPREF2844_08375;Name=HMPREF2844_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08375 KV808257.1 Protein Homology CDS 882 2039 . + 0 ID=cds-OFJ76324.1;Parent=gene-HMPREF2844_08375;Dbxref=NCBI_GP:OFJ76324.1;Name=OFJ76324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748295.1;locus_tag=HMPREF2844_08375;product=cell division protein FtsW;protein_id=OFJ76324.1;transl_table=11 KV808257.1 Genbank gene 2043 3110 . + . ID=gene-HMPREF2844_08380;Name=HMPREF2844_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08380 KV808257.1 Protein Homology CDS 2043 3110 . + 0 ID=cds-OFJ76325.1;Parent=gene-HMPREF2844_08380;Dbxref=NCBI_GP:OFJ76325.1;Name=OFJ76325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742831.1;locus_tag=HMPREF2844_08380;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=OFJ76325.1;transl_table=11 KV808257.1 Genbank gene 3245 4072 . + . ID=gene-HMPREF2844_08385;Name=HMPREF2844_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08385 KV808257.1 Protein Homology CDS 3245 4072 . + 0 ID=cds-OFJ76326.1;Parent=gene-HMPREF2844_08385;Dbxref=NCBI_GP:OFJ76326.1;Name=OFJ76326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742832.1;locus_tag=HMPREF2844_08385;product=methyltransferase;protein_id=OFJ76326.1;transl_table=11 KV808257.1 Genbank gene 4327 5736 . + . ID=gene-HMPREF2844_08390;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF2844_08390 KV808257.1 Protein Homology CDS 4327 5736 . + 0 ID=cds-OFJ76327.1;Parent=gene-HMPREF2844_08390;Dbxref=NCBI_GP:OFJ76327.1;Name=OFJ76327.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676714.1;locus_tag=HMPREF2844_08390;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=OFJ76327.1;transl_table=11 KV808257.1 Genbank gene 5887 6801 . + . ID=gene-HMPREF2844_08395;Name=HMPREF2844_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08395 KV808257.1 Protein Homology CDS 5887 6801 . + 0 ID=cds-OFJ76328.1;Parent=gene-HMPREF2844_08395;Dbxref=NCBI_GP:OFJ76328.1;Name=OFJ76328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764621.1;locus_tag=HMPREF2844_08395;product=D-alanine--D-alanine ligase;protein_id=OFJ76328.1;transl_table=11 KV808257.1 Genbank gene 6791 7516 . + . ID=gene-HMPREF2844_08400;Name=HMPREF2844_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08400 KV808257.1 Protein Homology CDS 6791 7516 . + 0 ID=cds-OFJ76329.1;Parent=gene-HMPREF2844_08400;Dbxref=NCBI_GP:OFJ76329.1;Name=OFJ76329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218801.1;locus_tag=HMPREF2844_08400;product=cell division protein FtsQ;protein_id=OFJ76329.1;transl_table=11 KV808257.1 Genbank gene 7596 8840 . + . ID=gene-HMPREF2844_08405;Name=HMPREF2844_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08405 KV808257.1 Protein Homology CDS 7596 8840 . + 0 ID=cds-OFJ76330.1;Parent=gene-HMPREF2844_08405;Dbxref=NCBI_GP:OFJ76330.1;Name=OFJ76330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271553.1;locus_tag=HMPREF2844_08405;product=cell division protein FtsA;protein_id=OFJ76330.1;transl_table=11 KV808257.1 Genbank gene 9065 10258 . + . ID=gene-HMPREF2844_08410;Name=HMPREF2844_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08410 KV808257.1 Protein Homology CDS 9065 10258 . + 0 ID=cds-OFJ76331.1;Parent=gene-HMPREF2844_08410;Dbxref=NCBI_GP:OFJ76331.1;Name=OFJ76331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272158.1;locus_tag=HMPREF2844_08410;product=cell division protein FtsZ;protein_id=OFJ76331.1;transl_table=11 KV808257.1 Genbank gene 10547 11002 . + . ID=gene-HMPREF2844_08415;Name=HMPREF2844_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08415 KV808257.1 Protein Homology CDS 10547 11002 . + 0 ID=cds-OFJ76332.1;Parent=gene-HMPREF2844_08415;Dbxref=NCBI_GP:OFJ76332.1;Name=OFJ76332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269947.1;locus_tag=HMPREF2844_08415;product=hypothetical protein;protein_id=OFJ76332.1;transl_table=11 KV808257.1 Genbank gene 11270 11500 . - . ID=gene-HMPREF2844_08420;Name=HMPREF2844_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08420 KV808257.1 Protein Homology CDS 11270 11500 . - 0 ID=cds-OFJ76333.1;Parent=gene-HMPREF2844_08420;Dbxref=NCBI_GP:OFJ76333.1;Name=OFJ76333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779746.1;locus_tag=HMPREF2844_08420;product=tryptophan biosynthesis protein trpCF;protein_id=OFJ76333.1;transl_table=11 KV808257.1 Genbank gene 11521 12321 . + . ID=gene-HMPREF2844_08425;Name=HMPREF2844_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08425 KV808257.1 Protein Homology CDS 11521 12321 . + 0 ID=cds-OFJ76334.1;Parent=gene-HMPREF2844_08425;Dbxref=NCBI_GP:OFJ76334.1;Name=OFJ76334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519053.1;locus_tag=HMPREF2844_08425;product=ABC transporter ATP-binding protein;protein_id=OFJ76334.1;transl_table=11 KV808257.1 Genbank gene 12461 13237 . + . ID=gene-HMPREF2844_08430;Name=HMPREF2844_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08430 KV808257.1 Protein Homology CDS 12461 13237 . + 0 ID=cds-OFJ76335.1;Parent=gene-HMPREF2844_08430;Dbxref=NCBI_GP:OFJ76335.1;Name=OFJ76335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003687103.1;locus_tag=HMPREF2844_08430;product=ABC transporter permease;protein_id=OFJ76335.1;transl_table=11 KV808257.1 Genbank gene 13288 13785 . + . ID=gene-HMPREF2844_08435;Name=HMPREF2844_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08435 KV808257.1 Protein Homology CDS 13288 13785 . + 0 ID=cds-OFJ76336.1;Parent=gene-HMPREF2844_08435;Dbxref=NCBI_GP:OFJ76336.1;Name=OFJ76336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012779600.1;locus_tag=HMPREF2844_08435;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=OFJ76336.1;transl_table=11 KV808257.1 Genbank gene 13822 14412 . + . ID=gene-HMPREF2844_08440;Name=HMPREF2844_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08440 KV808257.1 Protein Homology CDS 13822 14412 . + 0 ID=cds-OFJ76337.1;Parent=gene-HMPREF2844_08440;Dbxref=NCBI_GP:OFJ76337.1;Name=OFJ76337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272283.1;locus_tag=HMPREF2844_08440;product=transporter;protein_id=OFJ76337.1;transl_table=11 KV808257.1 Genbank gene 14511 14789 . + . ID=gene-HMPREF2844_08445;Name=HMPREF2844_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08445 KV808257.1 Protein Homology CDS 14511 14789 . + 0 ID=cds-OFJ76338.1;Parent=gene-HMPREF2844_08445;Dbxref=NCBI_GP:OFJ76338.1;Name=OFJ76338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763195.1;locus_tag=HMPREF2844_08445;product=sulfate transporter;protein_id=OFJ76338.1;transl_table=11 KV808257.1 Genbank gene 14786 15586 . + . ID=gene-HMPREF2844_08450;Name=HMPREF2844_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08450 KV808257.1 Protein Homology CDS 14786 15586 . + 0 ID=cds-OFJ76339.1;Parent=gene-HMPREF2844_08450;Dbxref=NCBI_GP:OFJ76339.1;Name=OFJ76339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269951.1;locus_tag=HMPREF2844_08450;product=ABC transporter;protein_id=OFJ76339.1;transl_table=11 KV808257.1 Genbank gene 15645 16796 . + . ID=gene-HMPREF2844_08455;Name=HMPREF2844_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08455 KV808257.1 Protein Homology CDS 15645 16796 . + 0 ID=cds-OFJ76340.1;Parent=gene-HMPREF2844_08455;Dbxref=NCBI_GP:OFJ76340.1;Name=OFJ76340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269952.1;locus_tag=HMPREF2844_08455;product=lipid-A-disaccharide synthase;protein_id=OFJ76340.1;transl_table=11 KV808257.1 Genbank gene 16964 17263 . - . ID=gene-HMPREF2844_08460;Name=HMPREF2844_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08460 KV808257.1 GeneMarkS+ CDS 16964 17263 . - 0 ID=cds-OFJ76341.1;Parent=gene-HMPREF2844_08460;Dbxref=NCBI_GP:OFJ76341.1;Name=OFJ76341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_08460;product=hypothetical protein;protein_id=OFJ76341.1;transl_table=11 KV808257.1 Genbank gene 17332 17922 . + . ID=gene-HMPREF2844_08465;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF2844_08465 KV808257.1 Protein Homology CDS 17332 17922 . + 0 ID=cds-OFJ76342.1;Parent=gene-HMPREF2844_08465;Dbxref=NCBI_GP:OFJ76342.1;Name=OFJ76342.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742856.1;locus_tag=HMPREF2844_08465;product=ribonuclease HII;protein_id=OFJ76342.1;transl_table=11 KV808257.1 Genbank gene 18124 19083 . + . ID=gene-HMPREF2844_08470;Name=HMPREF2844_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08470 KV808257.1 Protein Homology CDS 18124 19083 . + 0 ID=cds-OFJ76343.1;Parent=gene-HMPREF2844_08470;Dbxref=NCBI_GP:OFJ76343.1;Name=OFJ76343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686534.1;locus_tag=HMPREF2844_08470;product=sodium transporter;protein_id=OFJ76343.1;transl_table=11 KV808257.1 Genbank gene 19173 20555 . - . ID=gene-HMPREF2844_08475;Name=HMPREF2844_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08475 KV808257.1 Protein Homology CDS 19173 20555 . - 0 ID=cds-OFJ76344.1;Parent=gene-HMPREF2844_08475;Dbxref=NCBI_GP:OFJ76344.1;Name=OFJ76344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742859.1;locus_tag=HMPREF2844_08475;product=hypothetical protein;protein_id=OFJ76344.1;transl_table=11 KV808257.1 Genbank gene 20830 21378 . - . ID=gene-HMPREF2844_08480;Name=HMPREF2844_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08480 KV808257.1 Protein Homology CDS 20830 21378 . - 0 ID=cds-OFJ76345.1;Parent=gene-HMPREF2844_08480;Dbxref=NCBI_GP:OFJ76345.1;Name=OFJ76345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761686.1;locus_tag=HMPREF2844_08480;product=oligoribonuclease;protein_id=OFJ76345.1;transl_table=11 KV808257.1 Genbank gene 21585 22373 . + . ID=gene-HMPREF2844_08485;Name=HMPREF2844_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08485 KV808257.1 Protein Homology CDS 21585 22373 . + 0 ID=cds-OFJ76346.1;Parent=gene-HMPREF2844_08485;Dbxref=NCBI_GP:OFJ76346.1;Name=OFJ76346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009310937.1;locus_tag=HMPREF2844_08485;product=enoyl-ACP reductase;protein_id=OFJ76346.1;transl_table=11 KV808257.1 Genbank gene 22656 23105 . + . ID=gene-HMPREF2844_08490;Name=HMPREF2844_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08490 KV808257.1 Protein Homology CDS 22656 23105 . + 0 ID=cds-OFJ76347.1;Parent=gene-HMPREF2844_08490;Dbxref=NCBI_GP:OFJ76347.1;Name=OFJ76347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283804.1;locus_tag=HMPREF2844_08490;product=mechanosensitive ion channel protein MscL;protein_id=OFJ76347.1;transl_table=11 KV808257.1 Genbank gene 23193 24098 . - . ID=gene-HMPREF2844_08495;Name=HMPREF2844_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08495 KV808257.1 Protein Homology CDS 23193 24098 . - 0 ID=cds-OFJ76348.1;Parent=gene-HMPREF2844_08495;Dbxref=NCBI_GP:OFJ76348.1;Name=OFJ76348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742870.1;locus_tag=HMPREF2844_08495;product=molecular chaperone Hsp33;protein_id=OFJ76348.1;transl_table=11 KV808257.1 Genbank gene 24258 25901 . - . ID=gene-HMPREF2844_08500;Name=HMPREF2844_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08500 KV808257.1 Protein Homology CDS 24258 25901 . - 0 ID=cds-OFJ76349.1;Parent=gene-HMPREF2844_08500;Dbxref=NCBI_GP:OFJ76349.1;Name=OFJ76349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313064.1;locus_tag=HMPREF2844_08500;product=ubiquinone biosynthesis protein;protein_id=OFJ76349.1;transl_table=11 KV808257.1 Genbank gene 26072 26731 . + . ID=gene-HMPREF2844_08505;Name=HMPREF2844_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08505 KV808257.1 Protein Homology CDS 26072 26731 . + 0 ID=cds-OFJ76350.1;Parent=gene-HMPREF2844_08505;Dbxref=NCBI_GP:OFJ76350.1;Name=OFJ76350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682150.1;locus_tag=HMPREF2844_08505;product=hypothetical protein;protein_id=OFJ76350.1;transl_table=11 KV808257.1 Genbank gene 26750 26968 . + . ID=gene-HMPREF2844_08510;Name=HMPREF2844_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08510 KV808257.1 Protein Homology CDS 26750 26968 . + 0 ID=cds-OFJ76351.1;Parent=gene-HMPREF2844_08510;Dbxref=NCBI_GP:OFJ76351.1;Name=OFJ76351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765602.1;locus_tag=HMPREF2844_08510;product=hypothetical protein;protein_id=OFJ76351.1;transl_table=11 KV808257.1 Genbank gene 27301 28725 . + . ID=gene-HMPREF2844_08515;Name=HMPREF2844_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08515 KV808257.1 Protein Homology CDS 27301 28725 . + 0 ID=cds-OFJ76352.1;Parent=gene-HMPREF2844_08515;Dbxref=NCBI_GP:OFJ76352.1;Name=OFJ76352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749304.1;locus_tag=HMPREF2844_08515;product=sodium:alanine symporter;protein_id=OFJ76352.1;transl_table=11 KV808257.1 Genbank gene 28863 29486 . - . ID=gene-HMPREF2844_08520;Name=HMPREF2844_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08520 KV808257.1 Protein Homology CDS 28863 29486 . - 0 ID=cds-OFJ76353.1;Parent=gene-HMPREF2844_08520;Dbxref=NCBI_GP:OFJ76353.1;Name=OFJ76353.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003767114.1;locus_tag=HMPREF2844_08520;product=16S rRNA methyltransferase G;protein_id=OFJ76353.1;transl_table=11 KV808257.1 Genbank gene 29638 30636 . - . ID=gene-HMPREF2844_08525;Name=HMPREF2844_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08525 KV808257.1 Protein Homology CDS 29638 30636 . - 0 ID=cds-OFJ76354.1;Parent=gene-HMPREF2844_08525;Dbxref=NCBI_GP:OFJ76354.1;Name=OFJ76354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271023.1;locus_tag=HMPREF2844_08525;product=RNA pseudouridine synthase;protein_id=OFJ76354.1;transl_table=11 KV808257.1 Genbank gene 31198 34221 . + . ID=gene-HMPREF2844_08530;Name=HMPREF2844_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08530 KV808257.1 Protein Homology CDS 31198 34221 . + 0 ID=cds-OFJ76355.1;Parent=gene-HMPREF2844_08530;Dbxref=NCBI_GP:OFJ76355.1;Name=OFJ76355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779410.1;locus_tag=HMPREF2844_08530;product=ribonuclease E;protein_id=OFJ76355.1;transl_table=11 KV808257.1 Genbank gene 34323 34529 . - . ID=gene-HMPREF2844_08535;Name=HMPREF2844_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08535 KV808257.1 Protein Homology CDS 34323 34529 . - 0 ID=cds-OFJ76356.1;Parent=gene-HMPREF2844_08535;Dbxref=NCBI_GP:OFJ76356.1;Name=OFJ76356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224552.1;locus_tag=HMPREF2844_08535;product=hypothetical protein;protein_id=OFJ76356.1;transl_table=11 KV808257.1 Genbank gene 34853 36067 . + . ID=gene-HMPREF2844_08540;Name=HMPREF2844_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08540 KV808257.1 Protein Homology CDS 34853 36067 . + 0 ID=cds-OFJ76357.1;Parent=gene-HMPREF2844_08540;Dbxref=NCBI_GP:OFJ76357.1;Name=OFJ76357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682232.1;locus_tag=HMPREF2844_08540;product=MFS transporter;protein_id=OFJ76357.1;transl_table=11 KV808257.1 Genbank gene 36241 37500 . + . ID=gene-HMPREF2844_08545;Name=HMPREF2844_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08545 KV808257.1 Protein Homology CDS 36241 37500 . + 0 ID=cds-OFJ76358.1;Parent=gene-HMPREF2844_08545;Dbxref=NCBI_GP:OFJ76358.1;Name=OFJ76358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686302.1;locus_tag=HMPREF2844_08545;product=AmpG family muropeptide MFS transporter;protein_id=OFJ76358.1;transl_table=11 KV808257.1 Genbank gene 37802 38446 . + . ID=gene-HMPREF2844_08550;Name=HMPREF2844_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08550 KV808257.1 Protein Homology CDS 37802 38446 . + 0 ID=cds-OFJ76359.1;Parent=gene-HMPREF2844_08550;Dbxref=NCBI_GP:OFJ76359.1;Name=OFJ76359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215400.1;locus_tag=HMPREF2844_08550;product=50S ribosomal protein L3;protein_id=OFJ76359.1;transl_table=11 KV808257.1 Genbank gene 38446 39066 . + . ID=gene-HMPREF2844_08555;Name=HMPREF2844_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08555 KV808257.1 Protein Homology CDS 38446 39066 . + 0 ID=cds-OFJ76360.1;Parent=gene-HMPREF2844_08555;Dbxref=NCBI_GP:OFJ76360.1;Name=OFJ76360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P61056.1;locus_tag=HMPREF2844_08555;product=50S ribosomal protein L4;protein_id=OFJ76360.1;transl_table=11 KV808257.1 Genbank gene 39057 39377 . + . ID=gene-HMPREF2844_08560;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=HMPREF2844_08560 KV808257.1 Protein Homology CDS 39057 39377 . + 0 ID=cds-OFJ76361.1;Parent=gene-HMPREF2844_08560;Dbxref=NCBI_GP:OFJ76361.1;Name=OFJ76361.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009426082.1;locus_tag=HMPREF2844_08560;product=50S ribosomal protein L23;protein_id=OFJ76361.1;transl_table=11 KV808257.1 Genbank gene 39383 40216 . + . ID=gene-HMPREF2844_08565;Name=HMPREF2844_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08565 KV808257.1 Protein Homology CDS 39383 40216 . + 0 ID=cds-OFJ76362.1;Parent=gene-HMPREF2844_08565;Dbxref=NCBI_GP:OFJ76362.1;Name=OFJ76362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002228874.1;locus_tag=HMPREF2844_08565;product=50S ribosomal protein L2;protein_id=OFJ76362.1;transl_table=11 KV808257.1 Genbank gene 40222 40500 . + . ID=gene-HMPREF2844_08570;Name=HMPREF2844_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08570 KV808257.1 Protein Homology CDS 40222 40500 . + 0 ID=cds-OFJ76363.1;Parent=gene-HMPREF2844_08570;Dbxref=NCBI_GP:OFJ76363.1;Name=OFJ76363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7NQF6.1;locus_tag=HMPREF2844_08570;product=30S ribosomal protein S19;protein_id=OFJ76363.1;transl_table=11 KV808257.1 Genbank gene 40509 40838 . + . ID=gene-HMPREF2844_08575;Name=HMPREF2844_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08575 KV808257.1 Protein Homology CDS 40509 40838 . + 0 ID=cds-OFJ76364.1;Parent=gene-HMPREF2844_08575;Dbxref=NCBI_GP:OFJ76364.1;Name=OFJ76364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795898.1;locus_tag=HMPREF2844_08575;product=50S ribosomal protein L22;protein_id=OFJ76364.1;transl_table=11 KV808257.1 Genbank gene 40848 41543 . + . ID=gene-HMPREF2844_08580;Name=HMPREF2844_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08580 KV808257.1 Protein Homology CDS 40848 41543 . + 0 ID=cds-OFJ76365.1;Parent=gene-HMPREF2844_08580;Dbxref=NCBI_GP:OFJ76365.1;Name=OFJ76365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003707143.1;locus_tag=HMPREF2844_08580;product=30S ribosomal protein S3;protein_id=OFJ76365.1;transl_table=11 KV808257.1 Genbank gene 41527 41943 . + . ID=gene-HMPREF2844_08585;Name=HMPREF2844_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08585 KV808257.1 Protein Homology CDS 41527 41943 . + 0 ID=cds-OFJ76366.1;Parent=gene-HMPREF2844_08585;Dbxref=NCBI_GP:OFJ76366.1;Name=OFJ76366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008955643.1;locus_tag=HMPREF2844_08585;product=50S ribosomal protein L16;protein_id=OFJ76366.1;transl_table=11 KV808257.1 Genbank gene 41943 42134 . + . ID=gene-HMPREF2844_08590;Name=HMPREF2844_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08590 KV808257.1 Protein Homology CDS 41943 42134 . + 0 ID=cds-OFJ76367.1;Parent=gene-HMPREF2844_08590;Dbxref=NCBI_GP:OFJ76367.1;Name=OFJ76367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175233.1;locus_tag=HMPREF2844_08590;product=50S ribosomal protein L29;protein_id=OFJ76367.1;transl_table=11 KV808257.1 Genbank gene 42134 42397 . + . ID=gene-HMPREF2844_08595;Name=HMPREF2844_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08595 KV808257.1 Protein Homology CDS 42134 42397 . + 0 ID=cds-OFJ76368.1;Parent=gene-HMPREF2844_08595;Dbxref=NCBI_GP:OFJ76368.1;Name=OFJ76368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175232.1;locus_tag=HMPREF2844_08595;product=30S ribosomal protein S17;protein_id=OFJ76368.1;transl_table=11 KV808257.1 Genbank gene 42623 42991 . + . ID=gene-HMPREF2844_08600;Name=HMPREF2844_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08600 KV808257.1 Protein Homology CDS 42623 42991 . + 0 ID=cds-OFJ76369.1;Parent=gene-HMPREF2844_08600;Dbxref=NCBI_GP:OFJ76369.1;Name=OFJ76369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215434.1;locus_tag=HMPREF2844_08600;product=50S ribosomal protein L14;protein_id=OFJ76369.1;transl_table=11 KV808257.1 Genbank gene 43003 43326 . + . ID=gene-HMPREF2844_08605;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF2844_08605 KV808257.1 Protein Homology CDS 43003 43326 . + 0 ID=cds-OFJ76370.1;Parent=gene-HMPREF2844_08605;Dbxref=NCBI_GP:OFJ76370.1;Name=OFJ76370.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:SwissProt:P60732.1;locus_tag=HMPREF2844_08605;product=50S ribosomal protein L24;protein_id=OFJ76370.1;transl_table=11 KV808257.1 Genbank gene 43336 43875 . + . ID=gene-HMPREF2844_08610;Name=HMPREF2844_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08610 KV808257.1 Protein Homology CDS 43336 43875 . + 0 ID=cds-OFJ76371.1;Parent=gene-HMPREF2844_08610;Dbxref=NCBI_GP:OFJ76371.1;Name=OFJ76371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002215436.1;locus_tag=HMPREF2844_08610;product=50S ribosomal protein L5;protein_id=OFJ76371.1;transl_table=11 KV808257.1 Genbank gene 43878 44183 . + . ID=gene-HMPREF2844_08615;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF2844_08615 KV808257.1 Protein Homology CDS 43878 44183 . + 0 ID=cds-OFJ76372.1;Parent=gene-HMPREF2844_08615;Dbxref=NCBI_GP:OFJ76372.1;Name=OFJ76372.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the Legionella proteins appear to contain the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006464921.1;locus_tag=HMPREF2844_08615;product=30S ribosomal protein S14;protein_id=OFJ76372.1;transl_table=11 KV808257.1 Genbank gene 44198 44590 . + . ID=gene-HMPREF2844_08620;Name=HMPREF2844_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08620 KV808257.1 Protein Homology CDS 44198 44590 . + 0 ID=cds-OFJ76373.1;Parent=gene-HMPREF2844_08620;Dbxref=NCBI_GP:OFJ76373.1;Name=OFJ76373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66628.1;locus_tag=HMPREF2844_08620;product=30S ribosomal protein S8;protein_id=OFJ76373.1;transl_table=11 KV808257.1 Genbank gene 44604 45137 . + . ID=gene-HMPREF2844_08625;Name=HMPREF2844_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08625 KV808257.1 Protein Homology CDS 44604 45137 . + 0 ID=cds-OFJ76374.1;Parent=gene-HMPREF2844_08625;Dbxref=NCBI_GP:OFJ76374.1;Name=OFJ76374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520191.1;locus_tag=HMPREF2844_08625;product=50S ribosomal protein L6;protein_id=OFJ76374.1;transl_table=11 KV808257.1 Genbank gene 45151 45504 . + . ID=gene-HMPREF2844_08630;Name=HMPREF2844_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08630 KV808257.1 Protein Homology CDS 45151 45504 . + 0 ID=cds-OFJ76375.1;Parent=gene-HMPREF2844_08630;Dbxref=NCBI_GP:OFJ76375.1;Name=OFJ76375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F5U3.1;locus_tag=HMPREF2844_08630;product=50S ribosomal protein L18;protein_id=OFJ76375.1;transl_table=11 KV808257.1 Genbank gene 45522 46040 . + . ID=gene-HMPREF2844_08635;Name=HMPREF2844_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08635 KV808257.1 Protein Homology CDS 45522 46040 . + 0 ID=cds-OFJ76376.1;Parent=gene-HMPREF2844_08635;Dbxref=NCBI_GP:OFJ76376.1;Name=OFJ76376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684704.1;locus_tag=HMPREF2844_08635;product=30S ribosomal protein S5;protein_id=OFJ76376.1;transl_table=11 KV808257.1 Genbank gene 46033 46218 . + . ID=gene-HMPREF2844_08640;Name=HMPREF2844_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08640 KV808257.1 Protein Homology CDS 46033 46218 . + 0 ID=cds-OFJ76377.1;Parent=gene-HMPREF2844_08640;Dbxref=NCBI_GP:OFJ76377.1;Name=OFJ76377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282459.1;locus_tag=HMPREF2844_08640;product=50S ribosomal protein L30;protein_id=OFJ76377.1;transl_table=11 KV808257.1 Genbank gene 46220 46654 . + . ID=gene-HMPREF2844_08645;Name=HMPREF2844_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08645 KV808257.1 Protein Homology CDS 46220 46654 . + 0 ID=cds-OFJ76378.1;Parent=gene-HMPREF2844_08645;Dbxref=NCBI_GP:OFJ76378.1;Name=OFJ76378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009175229.1;locus_tag=HMPREF2844_08645;product=50S ribosomal protein L15;protein_id=OFJ76378.1;transl_table=11 KV808257.1 Genbank gene 46668 47981 . + . ID=gene-HMPREF2844_08650;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF2844_08650 KV808257.1 Protein Homology CDS 46668 47981 . + 0 ID=cds-OFJ76402.1;Parent=gene-HMPREF2844_08650;Dbxref=NCBI_GP:OFJ76402.1;Name=OFJ76402.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464597.1;locus_tag=HMPREF2844_08650;product=preprotein translocase subunit SecY;protein_id=OFJ76402.1;transl_table=11 KV808257.1 Genbank gene 47986 48204 . + . ID=gene-HMPREF2844_08655;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=HMPREF2844_08655 KV808257.1 Protein Homology CDS 47986 48204 . + 0 ID=cds-OFJ76379.1;Parent=gene-HMPREF2844_08655;Dbxref=NCBI_GP:OFJ76379.1;Name=OFJ76379.1;Note=stimulates the activities of the other two initiation factors%2C IF-2 and IF-3;gbkey=CDS;gene=infA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271038.1;locus_tag=HMPREF2844_08655;product=translation initiation factor IF-1;protein_id=OFJ76379.1;transl_table=11 KV808257.1 Genbank gene 48403 48765 . + . ID=gene-HMPREF2844_08660;Name=HMPREF2844_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08660 KV808257.1 Protein Homology CDS 48403 48765 . + 0 ID=cds-OFJ76380.1;Parent=gene-HMPREF2844_08660;Dbxref=NCBI_GP:OFJ76380.1;Name=OFJ76380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P66386.1;locus_tag=HMPREF2844_08660;product=30S ribosomal protein S13;protein_id=OFJ76380.1;transl_table=11 KV808257.1 Genbank gene 48785 49180 . + . ID=gene-HMPREF2844_08665;Name=HMPREF2844_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08665 KV808257.1 Protein Homology CDS 48785 49180 . + 0 ID=cds-OFJ76381.1;Parent=gene-HMPREF2844_08665;Dbxref=NCBI_GP:OFJ76381.1;Name=OFJ76381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019959419.1;locus_tag=HMPREF2844_08665;product=30S ribosomal protein S11;protein_id=OFJ76381.1;transl_table=11 KV808257.1 Genbank gene 49196 49816 . + . ID=gene-HMPREF2844_08670;Name=HMPREF2844_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08670 KV808257.1 Protein Homology CDS 49196 49816 . + 0 ID=cds-OFJ76382.1;Parent=gene-HMPREF2844_08670;Dbxref=NCBI_GP:OFJ76382.1;Name=OFJ76382.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004282443.1;locus_tag=HMPREF2844_08670;product=30S ribosomal protein S4;protein_id=OFJ76382.1;transl_table=11 KV808257.1 Genbank gene 49842 50828 . + . ID=gene-HMPREF2844_08675;Name=HMPREF2844_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08675 KV808257.1 Protein Homology CDS 49842 50828 . + 0 ID=cds-OFJ76383.1;Parent=gene-HMPREF2844_08675;Dbxref=NCBI_GP:OFJ76383.1;Name=OFJ76383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313011.1;locus_tag=HMPREF2844_08675;product=DNA-directed RNA polymerase subunit alpha;protein_id=OFJ76383.1;transl_table=11 KV808257.1 Genbank gene 50853 51230 . + . ID=gene-HMPREF2844_08680;Name=HMPREF2844_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08680 KV808257.1 Protein Homology CDS 50853 51230 . + 0 ID=cds-OFJ76384.1;Parent=gene-HMPREF2844_08680;Dbxref=NCBI_GP:OFJ76384.1;Name=OFJ76384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271041.1;locus_tag=HMPREF2844_08680;product=50S ribosomal protein L17;protein_id=OFJ76384.1;transl_table=11 KV808257.1 cmsearch binding_site 51533 51642 . + . ID=id-KV808257.1:51533..51642;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV808257.1 Genbank gene 51750 52844 . + . ID=gene-HMPREF2844_08685;Name=HMPREF2844_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08685 KV808257.1 Protein Homology CDS 51750 52844 . + 0 ID=cds-OFJ76385.1;Parent=gene-HMPREF2844_08685;Dbxref=NCBI_GP:OFJ76385.1;Name=OFJ76385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677212.1;locus_tag=HMPREF2844_08685;product=cytochrome C biogenesis protein CcdA;protein_id=OFJ76385.1;transl_table=11 KV808257.1 Genbank gene 52896 53354 . + . ID=gene-HMPREF2844_08690;Name=HMPREF2844_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08690 KV808257.1 Protein Homology CDS 52896 53354 . + 0 ID=cds-OFJ76386.1;Parent=gene-HMPREF2844_08690;Dbxref=NCBI_GP:OFJ76386.1;Name=OFJ76386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677210.1;locus_tag=HMPREF2844_08690;product=isoprenylcysteine carboxyl methyltransferase;protein_id=OFJ76386.1;transl_table=11 KV808257.1 Genbank gene 53498 54145 . + . ID=gene-HMPREF2844_08695;Name=HMPREF2844_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08695 KV808257.1 Protein Homology CDS 53498 54145 . + 0 ID=cds-OFJ76387.1;Parent=gene-HMPREF2844_08695;Dbxref=NCBI_GP:OFJ76387.1;Name=OFJ76387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712943.1;locus_tag=HMPREF2844_08695;product=nuclease;protein_id=OFJ76387.1;transl_table=11 KV808257.1 Genbank gene 54162 54779 . + . ID=gene-HMPREF2844_08700;Name=HMPREF2844_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08700 KV808257.1 Protein Homology CDS 54162 54779 . + 0 ID=cds-OFJ76388.1;Parent=gene-HMPREF2844_08700;Dbxref=NCBI_GP:OFJ76388.1;Name=OFJ76388.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776318.1;locus_tag=HMPREF2844_08700;product=thiamine phosphate synthase;protein_id=OFJ76388.1;transl_table=11 KV808257.1 Genbank gene 54895 55914 . - . ID=gene-HMPREF2844_08705;Name=HMPREF2844_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08705 KV808257.1 Protein Homology CDS 54895 55914 . - 0 ID=cds-OFJ76389.1;Parent=gene-HMPREF2844_08705;Dbxref=NCBI_GP:OFJ76389.1;Name=OFJ76389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014575617.1;locus_tag=HMPREF2844_08705;product=Zn-dependent oxidoreductase;protein_id=OFJ76389.1;transl_table=11 KV808257.1 Genbank gene 56019 56372 . + . ID=gene-HMPREF2844_08710;Name=HMPREF2844_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08710 KV808257.1 Protein Homology CDS 56019 56372 . + 0 ID=cds-OFJ76390.1;Parent=gene-HMPREF2844_08710;Dbxref=NCBI_GP:OFJ76390.1;Name=OFJ76390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776316.1;locus_tag=HMPREF2844_08710;product=HxlR family transcriptional regulator;protein_id=OFJ76390.1;transl_table=11 KV808257.1 Genbank gene 56403 56597 . + . ID=gene-HMPREF2844_08715;Name=HMPREF2844_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08715 KV808257.1 Protein Homology CDS 56403 56597 . + 0 ID=cds-OFJ76391.1;Parent=gene-HMPREF2844_08715;Dbxref=NCBI_GP:OFJ76391.1;Name=OFJ76391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273559.1;locus_tag=HMPREF2844_08715;product=thiamine biosynthesis protein ThiS;protein_id=OFJ76391.1;transl_table=11 KV808257.1 Genbank gene 56657 57445 . + . ID=gene-HMPREF2844_08720;Name=HMPREF2844_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08720 KV808257.1 Protein Homology CDS 56657 57445 . + 0 ID=cds-OFJ76392.1;Parent=gene-HMPREF2844_08720;Dbxref=NCBI_GP:OFJ76392.1;Name=OFJ76392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218200.1;locus_tag=HMPREF2844_08720;product=thiazole synthase;protein_id=OFJ76392.1;transl_table=11 KV808257.1 Genbank gene 57651 60440 . + . ID=gene-HMPREF2844_08725;Name=HMPREF2844_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08725 KV808257.1 Protein Homology CDS 57651 60440 . + 0 ID=cds-OFJ76393.1;Parent=gene-HMPREF2844_08725;Dbxref=NCBI_GP:OFJ76393.1;Name=OFJ76393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270400.1;locus_tag=HMPREF2844_08725;product=DNA polymerase I;protein_id=OFJ76393.1;transl_table=11 KV808257.1 Genbank gene 60450 61934 . + . ID=gene-HMPREF2844_08730;Name=HMPREF2844_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08730 KV808257.1 GeneMarkS+ CDS 60450 61934 . + 0 ID=cds-OFJ76394.1;Parent=gene-HMPREF2844_08730;Dbxref=NCBI_GP:OFJ76394.1;Name=OFJ76394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_08730;product=hypothetical protein;protein_id=OFJ76394.1;transl_table=11 KV808257.1 Genbank gene 62373 63746 . + . ID=gene-HMPREF2844_08735;Name=HMPREF2844_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08735 KV808257.1 Protein Homology CDS 62373 63746 . + 0 ID=cds-OFJ76395.1;Parent=gene-HMPREF2844_08735;Dbxref=NCBI_GP:OFJ76395.1;Name=OFJ76395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273550.1;locus_tag=HMPREF2844_08735;product=sodium:proton antiporter;protein_id=OFJ76395.1;transl_table=11 KV808257.1 Genbank gene 63747 63974 . + . ID=gene-HMPREF2844_08740;Name=HMPREF2844_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08740 KV808257.1 Protein Homology CDS 63747 63974 . + 0 ID=cds-OFJ76396.1;Parent=gene-HMPREF2844_08740;Dbxref=NCBI_GP:OFJ76396.1;Name=OFJ76396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748234.1;locus_tag=HMPREF2844_08740;product=hypothetical protein;protein_id=OFJ76396.1;transl_table=11 KV808257.1 Genbank gene 64139 64465 . - . ID=gene-HMPREF2844_08745;Name=HMPREF2844_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08745 KV808257.1 Protein Homology CDS 64139 64465 . - 0 ID=cds-OFJ76397.1;Parent=gene-HMPREF2844_08745;Dbxref=NCBI_GP:OFJ76397.1;Name=OFJ76397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247146.1;locus_tag=HMPREF2844_08745;product=sulfurtransferase;protein_id=OFJ76397.1;transl_table=11 KV808257.1 Genbank gene 64565 65221 . - . ID=gene-HMPREF2844_08750;Name=HMPREF2844_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08750 KV808257.1 Protein Homology CDS 64565 65221 . - 0 ID=cds-OFJ76398.1;Parent=gene-HMPREF2844_08750;Dbxref=NCBI_GP:OFJ76398.1;Name=OFJ76398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449510.1;locus_tag=HMPREF2844_08750;product=protein-L-isoaspartate O-methyltransferase;protein_id=OFJ76398.1;transl_table=11 KV808257.1 Genbank gene 65325 65834 . - . ID=gene-HMPREF2844_08755;Name=HMPREF2844_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08755 KV808257.1 Protein Homology CDS 65325 65834 . - 0 ID=cds-OFJ76399.1;Parent=gene-HMPREF2844_08755;Dbxref=NCBI_GP:OFJ76399.1;Name=OFJ76399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759300.1;locus_tag=HMPREF2844_08755;product=diguanylate cyclase;protein_id=OFJ76399.1;transl_table=11 KV808257.1 Genbank gene 66035 66808 . + . ID=gene-HMPREF2844_08760;Name=HMPREF2844_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08760 KV808257.1 Protein Homology CDS 66035 66808 . + 0 ID=cds-OFJ76400.1;Parent=gene-HMPREF2844_08760;Dbxref=NCBI_GP:OFJ76400.1;Name=OFJ76400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748082.1;locus_tag=HMPREF2844_08760;product=triose-phosphate isomerase;protein_id=OFJ76400.1;transl_table=11 KV808257.1 Genbank gene 66816 67178 . + . ID=gene-HMPREF2844_08765;Name=HMPREF2844_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08765 KV808257.1 Protein Homology CDS 66816 67178 . + 0 ID=cds-OFJ76401.1;Parent=gene-HMPREF2844_08765;Dbxref=NCBI_GP:OFJ76401.1;Name=OFJ76401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270391.1;locus_tag=HMPREF2844_08765;product=preprotein translocase subunit SecG;protein_id=OFJ76401.1;transl_table=11 KV808257.1 Genbank gene 67192 67277 . + . ID=gene-HMPREF2844_08770;Name=HMPREF2844_08770;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_08770 KV808257.1 tRNAscan-SE tRNA 67192 67277 . + . ID=rna-HMPREF2844_08770;Parent=gene-HMPREF2844_08770;anticodon=(pos:67226..67228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_08770;product=tRNA-Leu KV808257.1 tRNAscan-SE exon 67192 67277 . + . ID=exon-HMPREF2844_08770-1;Parent=rna-HMPREF2844_08770;anticodon=(pos:67226..67228);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_08770;product=tRNA-Leu KV808257.1 Genbank pseudogene 67650 67898 . + . ID=gene-HMPREF2844_08775;Name=HMPREF2844_08775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08775;pseudo=true KV808257.1 Protein Homology CDS 67650 67898 . + 0 ID=cds-HMPREF2844_08775;Parent=gene-HMPREF2844_08775;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270390.1;locus_tag=HMPREF2844_08775;product=integrase;pseudo=true;transl_table=11 KV808257.1 Genbank gene 67975 68598 . - . ID=gene-HMPREF2844_08780;Name=HMPREF2844_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08780 KV808257.1 Protein Homology CDS 67975 68598 . - 0 ID=cds-OFJ76167.1;Parent=gene-HMPREF2844_08780;Dbxref=NCBI_GP:OFJ76167.1;Name=OFJ76167.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270389.1;locus_tag=HMPREF2844_08780;product=RNA pseudouridine synthase;protein_id=OFJ76167.1;transl_table=11 KV808257.1 Genbank gene 68609 69181 . - . ID=gene-HMPREF2844_08785;Name=HMPREF2844_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08785 KV808257.1 Protein Homology CDS 68609 69181 . - 0 ID=cds-OFJ76168.1;Parent=gene-HMPREF2844_08785;Dbxref=NCBI_GP:OFJ76168.1;Name=OFJ76168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685869.1;locus_tag=HMPREF2844_08785;product=hypothetical protein;protein_id=OFJ76168.1;transl_table=11 KV808257.1 Genbank gene 69513 70100 . + . ID=gene-HMPREF2844_08790;Name=HMPREF2844_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08790 KV808257.1 Protein Homology CDS 69513 70100 . + 0 ID=cds-OFJ76169.1;Parent=gene-HMPREF2844_08790;Dbxref=NCBI_GP:OFJ76169.1;Name=OFJ76169.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270388.1;locus_tag=HMPREF2844_08790;product=hypothetical protein;protein_id=OFJ76169.1;transl_table=11 KV808257.1 Genbank gene 70228 71598 . - . ID=gene-HMPREF2844_08795;Name=HMPREF2844_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08795 KV808257.1 Protein Homology CDS 70228 71598 . - 0 ID=cds-OFJ76170.1;Parent=gene-HMPREF2844_08795;Dbxref=NCBI_GP:OFJ76170.1;Name=OFJ76170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272084.1;locus_tag=HMPREF2844_08795;product=signal recognition particle protein;protein_id=OFJ76170.1;transl_table=11 KV808257.1 Genbank gene 71715 72521 . + . ID=gene-HMPREF2844_08800;Name=HMPREF2844_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08800 KV808257.1 Protein Homology CDS 71715 72521 . + 0 ID=cds-OFJ76171.1;Parent=gene-HMPREF2844_08800;Dbxref=NCBI_GP:OFJ76171.1;Name=OFJ76171.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201277.1;locus_tag=HMPREF2844_08800;product=signal transduction protein;protein_id=OFJ76171.1;transl_table=11 ##sequence-region KV808258.1 1 460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808258.1 Genbank region 1 460 . + . ID=KV808258.1:1..460;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808258.1 Genbank pseudogene 70 460 . - . ID=gene-HMPREF2844_08805;Name=HMPREF2844_08805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_08805;pseudo=true KV808258.1 Protein Homology CDS 70 460 . - 1 ID=cds-HMPREF2844_08805;Parent=gene-HMPREF2844_08805;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002227655.1;locus_tag=HMPREF2844_08805;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region KV808259.1 1 22559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808259.1 Genbank region 1 22559 . + . ID=KV808259.1:1..22559;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808259.1 Genbank gene 103 2127 . - . ID=gene-HMPREF2844_08810;Name=HMPREF2844_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08810 KV808259.1 Protein Homology CDS 103 2127 . - 0 ID=cds-OFJ76117.1;Parent=gene-HMPREF2844_08810;Dbxref=NCBI_GP:OFJ76117.1;Name=OFJ76117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743156.1;locus_tag=HMPREF2844_08810;product=oligopeptide transporter%2C OPT family;protein_id=OFJ76117.1;transl_table=11 KV808259.1 Genbank gene 2373 4430 . + . ID=gene-HMPREF2844_08815;Name=HMPREF2844_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08815 KV808259.1 Protein Homology CDS 2373 4430 . + 0 ID=cds-OFJ76118.1;Parent=gene-HMPREF2844_08815;Dbxref=NCBI_GP:OFJ76118.1;Name=OFJ76118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JWP0.1;locus_tag=HMPREF2844_08815;product=methionine--tRNA ligase;protein_id=OFJ76118.1;transl_table=11 KV808259.1 Genbank gene 4488 4952 . + . ID=gene-HMPREF2844_08820;Name=HMPREF2844_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08820 KV808259.1 Protein Homology CDS 4488 4952 . + 0 ID=cds-OFJ76119.1;Parent=gene-HMPREF2844_08820;Dbxref=NCBI_GP:OFJ76119.1;Name=OFJ76119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743161.1;locus_tag=HMPREF2844_08820;product=acetyltransferase;protein_id=OFJ76119.1;transl_table=11 KV808259.1 Genbank gene 5156 6409 . + . ID=gene-HMPREF2844_08825;Name=HMPREF2844_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08825 KV808259.1 Protein Homology CDS 5156 6409 . + 0 ID=cds-OFJ76120.1;Parent=gene-HMPREF2844_08825;Dbxref=NCBI_GP:OFJ76120.1;Name=OFJ76120.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270755.1;locus_tag=HMPREF2844_08825;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=OFJ76120.1;transl_table=11 KV808259.1 Genbank gene 6535 7638 . + . ID=gene-HMPREF2844_08830;Name=HMPREF2844_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08830 KV808259.1 Protein Homology CDS 6535 7638 . + 0 ID=cds-OFJ76121.1;Parent=gene-HMPREF2844_08830;Dbxref=NCBI_GP:OFJ76121.1;Name=OFJ76121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449647.1;locus_tag=HMPREF2844_08830;product=peptide chain release factor 2;protein_id=OFJ76121.1;transl_table=11 KV808259.1 Genbank gene 7939 8829 . - . ID=gene-HMPREF2844_08835;Name=HMPREF2844_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08835 KV808259.1 Protein Homology CDS 7939 8829 . - 0 ID=cds-OFJ76122.1;Parent=gene-HMPREF2844_08835;Dbxref=NCBI_GP:OFJ76122.1;Name=OFJ76122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270754.1;locus_tag=HMPREF2844_08835;product=EDD domain protein;protein_id=OFJ76122.1;transl_table=11 KV808259.1 Genbank gene 9039 9524 . + . ID=gene-HMPREF2844_08840;Name=HMPREF2844_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08840 KV808259.1 Protein Homology CDS 9039 9524 . + 0 ID=cds-OFJ76123.1;Parent=gene-HMPREF2844_08840;Dbxref=NCBI_GP:OFJ76123.1;Name=OFJ76123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686707.1;locus_tag=HMPREF2844_08840;product=dihydrofolate reductase;protein_id=OFJ76123.1;transl_table=11 KV808259.1 Genbank gene 9724 11136 . - . ID=gene-HMPREF2844_08845;Name=HMPREF2844_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08845 KV808259.1 Protein Homology CDS 9724 11136 . - 0 ID=cds-OFJ76124.1;Parent=gene-HMPREF2844_08845;Dbxref=NCBI_GP:OFJ76124.1;Name=OFJ76124.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749227.1;locus_tag=HMPREF2844_08845;product=hypothetical protein;protein_id=OFJ76124.1;transl_table=11 KV808259.1 Genbank gene 11436 11894 . - . ID=gene-HMPREF2844_08850;Name=HMPREF2844_08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08850 KV808259.1 Protein Homology CDS 11436 11894 . - 0 ID=cds-OFJ76125.1;Parent=gene-HMPREF2844_08850;Dbxref=NCBI_GP:OFJ76125.1;Name=OFJ76125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245387.1;locus_tag=HMPREF2844_08850;product=aspartate carbamoyltransferase regulatory subunit;protein_id=OFJ76125.1;transl_table=11 KV808259.1 Genbank gene 11904 12824 . - . ID=gene-HMPREF2844_08855;Name=HMPREF2844_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08855 KV808259.1 Protein Homology CDS 11904 12824 . - 0 ID=cds-OFJ76126.1;Parent=gene-HMPREF2844_08855;Dbxref=NCBI_GP:OFJ76126.1;Name=OFJ76126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003677959.1;locus_tag=HMPREF2844_08855;product=aspartate carbamoyltransferase;protein_id=OFJ76126.1;transl_table=11 KV808259.1 Genbank gene 13329 15476 . + . ID=gene-HMPREF2844_08860;Name=HMPREF2844_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08860 KV808259.1 Protein Homology CDS 13329 15476 . + 0 ID=cds-OFJ75947.1;Parent=gene-HMPREF2844_08860;Dbxref=NCBI_GP:OFJ75947.1;Name=OFJ75947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686702.1;locus_tag=HMPREF2844_08860;product=hypothetical protein;protein_id=OFJ75947.1;transl_table=11 KV808259.1 Genbank gene 15682 16131 . - . ID=gene-HMPREF2844_08865;Name=HMPREF2844_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08865 KV808259.1 Protein Homology CDS 15682 16131 . - 0 ID=cds-OFJ75948.1;Parent=gene-HMPREF2844_08865;Dbxref=NCBI_GP:OFJ75948.1;Name=OFJ75948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686918.1;locus_tag=HMPREF2844_08865;product=hypothetical protein;protein_id=OFJ75948.1;transl_table=11 KV808259.1 Genbank gene 16519 17751 . - . ID=gene-HMPREF2844_08870;Name=HMPREF2844_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08870 KV808259.1 Protein Homology CDS 16519 17751 . - 0 ID=cds-OFJ75949.1;Parent=gene-HMPREF2844_08870;Dbxref=NCBI_GP:OFJ75949.1;Name=OFJ75949.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759784.1;locus_tag=HMPREF2844_08870;product=type IV pili twitching motility protein PilT;protein_id=OFJ75949.1;transl_table=11 KV808259.1 Genbank gene 17923 18969 . - . ID=gene-HMPREF2844_08875;Name=HMPREF2844_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08875 KV808259.1 Protein Homology CDS 17923 18969 . - 0 ID=cds-OFJ75950.1;Parent=gene-HMPREF2844_08875;Dbxref=NCBI_GP:OFJ75950.1;Name=OFJ75950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270746.1;locus_tag=HMPREF2844_08875;product=twitching motility protein PilT;protein_id=OFJ75950.1;transl_table=11 KV808259.1 Genbank gene 19149 19850 . + . ID=gene-HMPREF2844_08880;Name=HMPREF2844_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08880 KV808259.1 Protein Homology CDS 19149 19850 . + 0 ID=cds-OFJ75951.1;Parent=gene-HMPREF2844_08880;Dbxref=NCBI_GP:OFJ75951.1;Name=OFJ75951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759781.1;locus_tag=HMPREF2844_08880;product=YggS family pyridoxal phosphate enzyme;protein_id=OFJ75951.1;transl_table=11 KV808259.1 Genbank gene 19859 20254 . + . ID=gene-HMPREF2844_08885;Name=HMPREF2844_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08885 KV808259.1 Protein Homology CDS 19859 20254 . + 0 ID=cds-OFJ75952.1;Parent=gene-HMPREF2844_08885;Dbxref=NCBI_GP:OFJ75952.1;Name=OFJ75952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686922.1;locus_tag=HMPREF2844_08885;product=RNA-binding protein;protein_id=OFJ75952.1;transl_table=11 KV808259.1 Genbank gene 20345 21142 . + . ID=gene-HMPREF2844_08890;Name=HMPREF2844_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08890 KV808259.1 Protein Homology CDS 20345 21142 . + 0 ID=cds-OFJ75953.1;Parent=gene-HMPREF2844_08890;Dbxref=NCBI_GP:OFJ75953.1;Name=OFJ75953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747647.1;locus_tag=HMPREF2844_08890;product=pyrroline-5-carboxylate reductase;protein_id=OFJ75953.1;transl_table=11 KV808259.1 Genbank gene 21145 21699 . + . ID=gene-HMPREF2844_08895;Name=HMPREF2844_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08895 KV808259.1 Protein Homology CDS 21145 21699 . + 0 ID=cds-OFJ75954.1;Parent=gene-HMPREF2844_08895;Dbxref=NCBI_GP:OFJ75954.1;Name=OFJ75954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270742.1;locus_tag=HMPREF2844_08895;product=hypothetical protein;protein_id=OFJ75954.1;transl_table=11 KV808259.1 Genbank gene 21893 22309 . + . ID=gene-HMPREF2844_08900;Name=HMPREF2844_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08900 KV808259.1 Protein Homology CDS 21893 22309 . + 0 ID=cds-OFJ75955.1;Parent=gene-HMPREF2844_08900;Dbxref=NCBI_GP:OFJ75955.1;Name=OFJ75955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224742.1;locus_tag=HMPREF2844_08900;product=RNA polymerase-binding protein DksA;protein_id=OFJ75955.1;transl_table=11 ##sequence-region KV808260.1 1 40618 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808260.1 Genbank region 1 40618 . + . ID=KV808260.1:1..40618;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808260.1 Genbank gene 106 816 . + . ID=gene-HMPREF2844_08905;Name=HMPREF2844_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08905 KV808260.1 Protein Homology CDS 106 816 . + 0 ID=cds-OFJ75943.1;Parent=gene-HMPREF2844_08905;Dbxref=NCBI_GP:OFJ75943.1;Name=OFJ75943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686491.1;locus_tag=HMPREF2844_08905;product=branched-chain amino acid ABC transporter permease;protein_id=OFJ75943.1;transl_table=11 KV808260.1 Genbank gene 813 1121 . + . ID=gene-HMPREF2844_08910;Name=HMPREF2844_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08910 KV808260.1 Protein Homology CDS 813 1121 . + 0 ID=cds-OFJ75910.1;Parent=gene-HMPREF2844_08910;Dbxref=NCBI_GP:OFJ75910.1;Name=OFJ75910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746560.1;locus_tag=HMPREF2844_08910;product=hypothetical protein;protein_id=OFJ75910.1;transl_table=11 KV808260.1 Genbank gene 1252 2001 . + . ID=gene-HMPREF2844_08915;Name=HMPREF2844_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08915 KV808260.1 Protein Homology CDS 1252 2001 . + 0 ID=cds-OFJ75911.1;Parent=gene-HMPREF2844_08915;Dbxref=NCBI_GP:OFJ75911.1;Name=OFJ75911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779096.1;locus_tag=HMPREF2844_08915;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=OFJ75911.1;transl_table=11 KV808260.1 Genbank gene 2286 3239 . - . ID=gene-HMPREF2844_08920;Name=ldh;gbkey=Gene;gene=ldh;gene_biotype=protein_coding;locus_tag=HMPREF2844_08920 KV808260.1 Protein Homology CDS 2286 3239 . - 0 ID=cds-OFJ75912.1;Parent=gene-HMPREF2844_08920;Dbxref=NCBI_GP:OFJ75912.1;Name=OFJ75912.1;Note=Converts (S)-lactate and NAD(+) to pyruvate and NADH;gbkey=CDS;gene=ldh;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312189.1;locus_tag=HMPREF2844_08920;product=L-lactate dehydrogenase;protein_id=OFJ75912.1;transl_table=11 KV808260.1 Genbank gene 3579 4373 . + . ID=gene-HMPREF2844_08925;Name=HMPREF2844_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08925 KV808260.1 Protein Homology CDS 3579 4373 . + 0 ID=cds-OFJ75913.1;Parent=gene-HMPREF2844_08925;Dbxref=NCBI_GP:OFJ75913.1;Name=OFJ75913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005568042.1;locus_tag=HMPREF2844_08925;product=hypothetical protein;protein_id=OFJ75913.1;transl_table=11 KV808260.1 Genbank gene 4591 5442 . - . ID=gene-HMPREF2844_08930;Name=HMPREF2844_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08930 KV808260.1 Protein Homology CDS 4591 5442 . - 0 ID=cds-OFJ75914.1;Parent=gene-HMPREF2844_08930;Dbxref=NCBI_GP:OFJ75914.1;Name=OFJ75914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740661.1;locus_tag=HMPREF2844_08930;product=hypothetical protein;protein_id=OFJ75914.1;transl_table=11 KV808260.1 Genbank gene 5512 6327 . - . ID=gene-HMPREF2844_08935;Name=HMPREF2844_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08935 KV808260.1 Protein Homology CDS 5512 6327 . - 0 ID=cds-OFJ75915.1;Parent=gene-HMPREF2844_08935;Dbxref=NCBI_GP:OFJ75915.1;Name=OFJ75915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756835.1;locus_tag=HMPREF2844_08935;product=RNA methyltransferase;protein_id=OFJ75915.1;transl_table=11 KV808260.1 Genbank gene 6511 7296 . + . ID=gene-HMPREF2844_08940;Name=HMPREF2844_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08940 KV808260.1 Protein Homology CDS 6511 7296 . + 0 ID=cds-OFJ75916.1;Parent=gene-HMPREF2844_08940;Dbxref=NCBI_GP:OFJ75916.1;Name=OFJ75916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815663.1;locus_tag=HMPREF2844_08940;product=inositol monophosphatase;protein_id=OFJ75916.1;transl_table=11 KV808260.1 Genbank gene 7522 8796 . + . ID=gene-HMPREF2844_08945;Name=HMPREF2844_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08945 KV808260.1 Protein Homology CDS 7522 8796 . + 0 ID=cds-OFJ75944.1;Parent=gene-HMPREF2844_08945;Dbxref=NCBI_GP:OFJ75944.1;Name=OFJ75944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270233.1;locus_tag=HMPREF2844_08945;product=transporter;protein_id=OFJ75944.1;transl_table=11 KV808260.1 Genbank gene 8836 11019 . + . ID=gene-HMPREF2844_08950;Name=HMPREF2844_08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08950 KV808260.1 Protein Homology CDS 8836 11019 . + 0 ID=cds-OFJ75917.1;Parent=gene-HMPREF2844_08950;Dbxref=NCBI_GP:OFJ75917.1;Name=OFJ75917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688375.1;locus_tag=HMPREF2844_08950;product=hypothetical protein;protein_id=OFJ75917.1;transl_table=11 KV808260.1 Genbank gene 11110 12336 . + . ID=gene-HMPREF2844_08955;Name=HMPREF2844_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08955 KV808260.1 Protein Homology CDS 11110 12336 . + 0 ID=cds-OFJ75918.1;Parent=gene-HMPREF2844_08955;Dbxref=NCBI_GP:OFJ75918.1;Name=OFJ75918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756845.1;locus_tag=HMPREF2844_08955;product=hemolysin secretion protein D;protein_id=OFJ75918.1;transl_table=11 KV808260.1 Genbank gene 12592 13902 . + . ID=gene-HMPREF2844_08960;Name=HMPREF2844_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08960 KV808260.1 Protein Homology CDS 12592 13902 . + 0 ID=cds-OFJ75919.1;Parent=gene-HMPREF2844_08960;Dbxref=NCBI_GP:OFJ75919.1;Name=OFJ75919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776995.1;locus_tag=HMPREF2844_08960;product=sulfate adenylyltransferase;protein_id=OFJ75919.1;transl_table=11 KV808260.1 Genbank gene 14156 15385 . - . ID=gene-HMPREF2844_08965;Name=HMPREF2844_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08965 KV808260.1 Protein Homology CDS 14156 15385 . - 0 ID=cds-OFJ75920.1;Parent=gene-HMPREF2844_08965;Dbxref=NCBI_GP:OFJ75920.1;Name=OFJ75920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688378.1;locus_tag=HMPREF2844_08965;product=MFS transporter;protein_id=OFJ75920.1;transl_table=11 KV808260.1 Genbank gene 15529 16104 . - . ID=gene-HMPREF2844_08970;Name=HMPREF2844_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08970 KV808260.1 Protein Homology CDS 15529 16104 . - 0 ID=cds-OFJ75921.1;Parent=gene-HMPREF2844_08970;Dbxref=NCBI_GP:OFJ75921.1;Name=OFJ75921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755956.1;locus_tag=HMPREF2844_08970;product=NAD(P)H dehydrogenase;protein_id=OFJ75921.1;transl_table=11 KV808260.1 Genbank gene 16386 16784 . - . ID=gene-HMPREF2844_08975;Name=HMPREF2844_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08975 KV808260.1 Protein Homology CDS 16386 16784 . - 0 ID=cds-OFJ75922.1;Parent=gene-HMPREF2844_08975;Dbxref=NCBI_GP:OFJ75922.1;Name=OFJ75922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519722.1;locus_tag=HMPREF2844_08975;product=extensin;protein_id=OFJ75922.1;transl_table=11 KV808260.1 Genbank gene 17053 19098 . - . ID=gene-HMPREF2844_08980;Name=HMPREF2844_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08980 KV808260.1 Protein Homology CDS 17053 19098 . - 0 ID=cds-OFJ75923.1;Parent=gene-HMPREF2844_08980;Dbxref=NCBI_GP:OFJ75923.1;Name=OFJ75923.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686568.1;locus_tag=HMPREF2844_08980;product=vibriobactin receptor;protein_id=OFJ75923.1;transl_table=11 KV808260.1 Genbank gene 19503 20138 . + . ID=gene-HMPREF2844_08985;Name=HMPREF2844_08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08985 KV808260.1 Protein Homology CDS 19503 20138 . + 0 ID=cds-OFJ75924.1;Parent=gene-HMPREF2844_08985;Dbxref=NCBI_GP:OFJ75924.1;Name=OFJ75924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271665.1;locus_tag=HMPREF2844_08985;product=TetR family transcriptional regulator;protein_id=OFJ75924.1;transl_table=11 KV808260.1 Genbank gene 20226 20426 . + . ID=gene-HMPREF2844_08990;Name=HMPREF2844_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08990 KV808260.1 Protein Homology CDS 20226 20426 . + 0 ID=cds-OFJ75925.1;Parent=gene-HMPREF2844_08990;Dbxref=NCBI_GP:OFJ75925.1;Name=OFJ75925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688382.1;locus_tag=HMPREF2844_08990;product=hypothetical protein;protein_id=OFJ75925.1;transl_table=11 KV808260.1 Genbank gene 20487 22538 . - . ID=gene-HMPREF2844_08995;Name=HMPREF2844_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_08995 KV808260.1 Protein Homology CDS 20487 22538 . - 0 ID=cds-OFJ75926.1;Parent=gene-HMPREF2844_08995;Dbxref=NCBI_GP:OFJ75926.1;Name=OFJ75926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688383.1;locus_tag=HMPREF2844_08995;product=type I secretion protein;protein_id=OFJ75926.1;transl_table=11 KV808260.1 Genbank gene 22828 24087 . - . ID=gene-HMPREF2844_09000;Name=HMPREF2844_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09000 KV808260.1 Protein Homology CDS 22828 24087 . - 0 ID=cds-OFJ75927.1;Parent=gene-HMPREF2844_09000;Dbxref=NCBI_GP:OFJ75927.1;Name=OFJ75927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688384.1;locus_tag=HMPREF2844_09000;product=gamma-glutamyl-phosphate reductase;protein_id=OFJ75927.1;transl_table=11 KV808260.1 Genbank gene 24621 25643 . - . ID=gene-HMPREF2844_09005;Name=HMPREF2844_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09005 KV808260.1 Protein Homology CDS 24621 25643 . - 0 ID=cds-OFJ75928.1;Parent=gene-HMPREF2844_09005;Dbxref=NCBI_GP:OFJ75928.1;Name=OFJ75928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174013.1;locus_tag=HMPREF2844_09005;product=lipopolysaccharide heptosyltransferase II;protein_id=OFJ75928.1;transl_table=11 KV808260.1 Genbank gene 25739 26404 . - . ID=gene-HMPREF2844_09010;Name=HMPREF2844_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09010 KV808260.1 Protein Homology CDS 25739 26404 . - 0 ID=cds-OFJ75929.1;Parent=gene-HMPREF2844_09010;Dbxref=NCBI_GP:OFJ75929.1;Name=OFJ75929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740681.1;locus_tag=HMPREF2844_09010;product=cold-shock protein;protein_id=OFJ75929.1;transl_table=11 KV808260.1 Genbank gene 26657 28312 . - . ID=gene-HMPREF2844_09015;Name=HMPREF2844_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09015 KV808260.1 Protein Homology CDS 26657 28312 . - 0 ID=cds-OFJ75930.1;Parent=gene-HMPREF2844_09015;Dbxref=NCBI_GP:OFJ75930.1;Name=OFJ75930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173349.1;locus_tag=HMPREF2844_09015;product=oxidoreductase;protein_id=OFJ75930.1;transl_table=11 KV808260.1 Genbank gene 28525 29415 . - . ID=gene-HMPREF2844_09020;Name=HMPREF2844_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09020 KV808260.1 Protein Homology CDS 28525 29415 . - 0 ID=cds-OFJ75931.1;Parent=gene-HMPREF2844_09020;Dbxref=NCBI_GP:OFJ75931.1;Name=OFJ75931.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688388.1;locus_tag=HMPREF2844_09020;product=NAD(+) kinase;protein_id=OFJ75931.1;transl_table=11 KV808260.1 Genbank gene 29436 30008 . - . ID=gene-HMPREF2844_09025;Name=HMPREF2844_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09025 KV808260.1 Protein Homology CDS 29436 30008 . - 0 ID=cds-OFJ75932.1;Parent=gene-HMPREF2844_09025;Dbxref=NCBI_GP:OFJ75932.1;Name=OFJ75932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740685.1;locus_tag=HMPREF2844_09025;product=hypothetical protein;protein_id=OFJ75932.1;transl_table=11 KV808260.1 Genbank gene 30185 30979 . - . ID=gene-HMPREF2844_09030;Name=HMPREF2844_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09030 KV808260.1 Protein Homology CDS 30185 30979 . - 0 ID=cds-OFJ75933.1;Parent=gene-HMPREF2844_09030;Dbxref=NCBI_GP:OFJ75933.1;Name=OFJ75933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270675.1;locus_tag=HMPREF2844_09030;product=NAD(P)-dependent oxidoreductase;protein_id=OFJ75933.1;transl_table=11 KV808260.1 Genbank gene 30992 32131 . - . ID=gene-HMPREF2844_09035;Name=HMPREF2844_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09035 KV808260.1 Protein Homology CDS 30992 32131 . - 0 ID=cds-OFJ75934.1;Parent=gene-HMPREF2844_09035;Dbxref=NCBI_GP:OFJ75934.1;Name=OFJ75934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520330.1;locus_tag=HMPREF2844_09035;product=hypothetical protein;protein_id=OFJ75934.1;transl_table=11 KV808260.1 Genbank gene 32331 33080 . - . ID=gene-HMPREF2844_09040;Name=HMPREF2844_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09040 KV808260.1 Protein Homology CDS 32331 33080 . - 0 ID=cds-OFJ75935.1;Parent=gene-HMPREF2844_09040;Dbxref=NCBI_GP:OFJ75935.1;Name=OFJ75935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678284.1;locus_tag=HMPREF2844_09040;product=hydroxyacylglutathione hydrolase;protein_id=OFJ75935.1;transl_table=11 KV808260.1 Genbank gene 33208 33639 . - . ID=gene-HMPREF2844_09045;Name=HMPREF2844_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09045 KV808260.1 Protein Homology CDS 33208 33639 . - 0 ID=cds-OFJ75936.1;Parent=gene-HMPREF2844_09045;Dbxref=NCBI_GP:OFJ75936.1;Name=OFJ75936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744201.1;locus_tag=HMPREF2844_09045;product=type IV pilin protein;protein_id=OFJ75936.1;transl_table=11 KV808260.1 Genbank gene 33960 35138 . + . ID=gene-HMPREF2844_09050;Name=HMPREF2844_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09050 KV808260.1 Protein Homology CDS 33960 35138 . + 0 ID=cds-OFJ75937.1;Parent=gene-HMPREF2844_09050;Dbxref=NCBI_GP:OFJ75937.1;Name=OFJ75937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519696.1;locus_tag=HMPREF2844_09050;product=efflux transporter periplasmic adaptor subunit;protein_id=OFJ75937.1;transl_table=11 KV808260.1 Genbank gene 35234 37171 . + . ID=gene-HMPREF2844_09055;Name=HMPREF2844_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09055 KV808260.1 Protein Homology CDS 35234 37171 . + 0 ID=cds-OFJ75938.1;Parent=gene-HMPREF2844_09055;Dbxref=NCBI_GP:OFJ75938.1;Name=OFJ75938.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683017.1;locus_tag=HMPREF2844_09055;product=MacB family efflux pump subunit;protein_id=OFJ75938.1;transl_table=11 KV808260.1 Genbank gene 37419 38093 . + . ID=gene-HMPREF2844_09060;Name=HMPREF2844_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09060 KV808260.1 Protein Homology CDS 37419 38093 . + 0 ID=cds-OFJ75939.1;Parent=gene-HMPREF2844_09060;Dbxref=NCBI_GP:OFJ75939.1;Name=OFJ75939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003682634.1;locus_tag=HMPREF2844_09060;product=glutathione S-transferase;protein_id=OFJ75939.1;transl_table=11 KV808260.1 Genbank gene 38406 38696 . + . ID=gene-HMPREF2844_09065;Name=HMPREF2844_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09065 KV808260.1 Protein Homology CDS 38406 38696 . + 0 ID=cds-OFJ75940.1;Parent=gene-HMPREF2844_09065;Dbxref=NCBI_GP:OFJ75940.1;Name=OFJ75940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174632.1;locus_tag=HMPREF2844_09065;product=mitomycin resistance protein;protein_id=OFJ75940.1;transl_table=11 KV808260.1 Genbank gene 38772 40154 . + . ID=gene-HMPREF2844_09070;Name=HMPREF2844_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09070 KV808260.1 Protein Homology CDS 38772 40154 . + 0 ID=cds-OFJ75941.1;Parent=gene-HMPREF2844_09070;Dbxref=NCBI_GP:OFJ75941.1;Name=OFJ75941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425033.1;locus_tag=HMPREF2844_09070;product=transporter;protein_id=OFJ75941.1;transl_table=11 KV808260.1 Genbank gene 40296 40568 . + . ID=gene-HMPREF2844_09075;Name=HMPREF2844_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09075 KV808260.1 GeneMarkS+ CDS 40296 40568 . + 0 ID=cds-OFJ75942.1;Parent=gene-HMPREF2844_09075;Dbxref=NCBI_GP:OFJ75942.1;Name=OFJ75942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09075;product=hypothetical protein;protein_id=OFJ75942.1;transl_table=11 ##sequence-region KV808261.1 1 2727 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808261.1 Genbank region 1 2727 . + . ID=KV808261.1:1..2727;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808261.1 Genbank gene 56 694 . - . ID=gene-HMPREF2844_09080;Name=HMPREF2844_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09080 KV808261.1 Protein Homology CDS 56 694 . - 0 ID=cds-OFJ75863.1;Parent=gene-HMPREF2844_09080;Dbxref=NCBI_GP:OFJ75863.1;Name=OFJ75863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747165.1;locus_tag=HMPREF2844_09080;product=hypothetical protein;protein_id=OFJ75863.1;transl_table=11 KV808261.1 Genbank gene 873 1541 . + . ID=gene-HMPREF2844_09085;Name=HMPREF2844_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09085 KV808261.1 Protein Homology CDS 873 1541 . + 0 ID=cds-OFJ75864.1;Parent=gene-HMPREF2844_09085;Dbxref=NCBI_GP:OFJ75864.1;Name=OFJ75864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003693249.1;locus_tag=HMPREF2844_09085;product=DnaA regulatory inactivator Hda;protein_id=OFJ75864.1;transl_table=11 KV808261.1 Genbank gene 1538 2206 . + . ID=gene-HMPREF2844_09090;Name=HMPREF2844_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09090 KV808261.1 Protein Homology CDS 1538 2206 . + 0 ID=cds-OFJ75865.1;Parent=gene-HMPREF2844_09090;Dbxref=NCBI_GP:OFJ75865.1;Name=OFJ75865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687170.1;locus_tag=HMPREF2844_09090;product=phosphoserine phosphatase;protein_id=OFJ75865.1;transl_table=11 KV808261.1 Genbank gene 2400 2699 . + . ID=gene-HMPREF2844_09095;Name=HMPREF2844_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09095 KV808261.1 Protein Homology CDS 2400 2699 . + 0 ID=cds-OFJ75866.1;Parent=gene-HMPREF2844_09095;Dbxref=NCBI_GP:OFJ75866.1;Name=OFJ75866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312876.1;locus_tag=HMPREF2844_09095;product=acyl carrier protein;protein_id=OFJ75866.1;transl_table=11 ##sequence-region KV808262.1 1 37522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808262.1 Genbank region 1 37522 . + . ID=KV808262.1:1..37522;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808262.1 Genbank gene 171 455 . - . ID=gene-HMPREF2844_09100;Name=HMPREF2844_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09100 KV808262.1 Protein Homology CDS 171 455 . - 0 ID=cds-OFJ75724.1;Parent=gene-HMPREF2844_09100;Dbxref=NCBI_GP:OFJ75724.1;Name=OFJ75724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003750834.1;locus_tag=HMPREF2844_09100;product=ribosome assembly protein YhbY;protein_id=OFJ75724.1;transl_table=11 KV808262.1 Genbank gene 564 1184 . + . ID=gene-HMPREF2844_09105;Name=HMPREF2844_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09105 KV808262.1 Protein Homology CDS 564 1184 . + 0 ID=cds-OFJ75725.1;Parent=gene-HMPREF2844_09105;Dbxref=NCBI_GP:OFJ75725.1;Name=OFJ75725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688282.1;locus_tag=HMPREF2844_09105;product=23S rRNA methyltransferase;protein_id=OFJ75725.1;transl_table=11 KV808262.1 Genbank gene 1249 3204 . + . ID=gene-HMPREF2844_09110;Name=HMPREF2844_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09110 KV808262.1 Protein Homology CDS 1249 3204 . + 0 ID=cds-OFJ75726.1;Parent=gene-HMPREF2844_09110;Dbxref=NCBI_GP:OFJ75726.1;Name=OFJ75726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683581.1;locus_tag=HMPREF2844_09110;product=cell division protein FtsH;protein_id=OFJ75726.1;transl_table=11 KV808262.1 Genbank gene 3548 4498 . - . ID=gene-HMPREF2844_09115;Name=HMPREF2844_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09115 KV808262.1 Protein Homology CDS 3548 4498 . - 0 ID=cds-OFJ75727.1;Parent=gene-HMPREF2844_09115;Dbxref=NCBI_GP:OFJ75727.1;Name=OFJ75727.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743113.1;locus_tag=HMPREF2844_09115;product=thioredoxin-disulfide reductase;protein_id=OFJ75727.1;transl_table=11 KV808262.1 Genbank gene 4777 5778 . - . ID=gene-HMPREF2844_09120;Name=HMPREF2844_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09120 KV808262.1 Protein Homology CDS 4777 5778 . - 0 ID=cds-OFJ75728.1;Parent=gene-HMPREF2844_09120;Dbxref=NCBI_GP:OFJ75728.1;Name=OFJ75728.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271236.1;locus_tag=HMPREF2844_09120;product=delta-aminolevulinic acid dehydratase;protein_id=OFJ75728.1;transl_table=11 KV808262.1 Genbank gene 5932 6657 . - . ID=gene-HMPREF2844_09125;Name=HMPREF2844_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09125 KV808262.1 Protein Homology CDS 5932 6657 . - 0 ID=cds-OFJ75729.1;Parent=gene-HMPREF2844_09125;Dbxref=NCBI_GP:OFJ75729.1;Name=OFJ75729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760647.1;locus_tag=HMPREF2844_09125;product=hypothetical protein;protein_id=OFJ75729.1;transl_table=11 KV808262.1 Genbank gene 6886 7167 . - . ID=gene-HMPREF2844_09130;Name=HMPREF2844_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09130 KV808262.1 Protein Homology CDS 6886 7167 . - 0 ID=cds-OFJ75730.1;Parent=gene-HMPREF2844_09130;Dbxref=NCBI_GP:OFJ75730.1;Name=OFJ75730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271234.1;locus_tag=HMPREF2844_09130;product=hypothetical protein;protein_id=OFJ75730.1;transl_table=11 KV808262.1 Genbank gene 7351 8892 . + . ID=gene-HMPREF2844_09135;Name=HMPREF2844_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09135 KV808262.1 Protein Homology CDS 7351 8892 . + 0 ID=cds-OFJ75731.1;Parent=gene-HMPREF2844_09135;Dbxref=NCBI_GP:OFJ75731.1;Name=OFJ75731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004285924.1;locus_tag=HMPREF2844_09135;product=MFS transporter;protein_id=OFJ75731.1;transl_table=11 KV808262.1 Genbank gene 9188 10741 . - . ID=gene-HMPREF2844_09140;Name=HMPREF2844_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09140 KV808262.1 Protein Homology CDS 9188 10741 . - 0 ID=cds-OFJ75732.1;Parent=gene-HMPREF2844_09140;Dbxref=NCBI_GP:OFJ75732.1;Name=OFJ75732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743119.1;locus_tag=HMPREF2844_09140;product=hypothetical protein;protein_id=OFJ75732.1;transl_table=11 KV808262.1 Genbank gene 11028 12437 . - . ID=gene-HMPREF2844_09145;Name=HMPREF2844_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09145 KV808262.1 Protein Homology CDS 11028 12437 . - 0 ID=cds-OFJ75733.1;Parent=gene-HMPREF2844_09145;Dbxref=NCBI_GP:OFJ75733.1;Name=OFJ75733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687956.1;locus_tag=HMPREF2844_09145;product=MFS transporter;protein_id=OFJ75733.1;transl_table=11 KV808262.1 Genbank gene 12865 13644 . + . ID=gene-HMPREF2844_09150;Name=HMPREF2844_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09150 KV808262.1 Protein Homology CDS 12865 13644 . + 0 ID=cds-OFJ75734.1;Parent=gene-HMPREF2844_09150;Dbxref=NCBI_GP:OFJ75734.1;Name=OFJ75734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271230.1;locus_tag=HMPREF2844_09150;product=oxidoreductase;protein_id=OFJ75734.1;transl_table=11 KV808262.1 Genbank gene 13641 14342 . + . ID=gene-HMPREF2844_09155;Name=HMPREF2844_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09155 KV808262.1 Protein Homology CDS 13641 14342 . + 0 ID=cds-OFJ75735.1;Parent=gene-HMPREF2844_09155;Dbxref=NCBI_GP:OFJ75735.1;Name=OFJ75735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JYT7.1;locus_tag=HMPREF2844_09155;product=hypothetical protein;protein_id=OFJ75735.1;transl_table=11 KV808262.1 Genbank gene 14339 15793 . + . ID=gene-HMPREF2844_09160;Name=HMPREF2844_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09160 KV808262.1 Protein Homology CDS 14339 15793 . + 0 ID=cds-OFJ75736.1;Parent=gene-HMPREF2844_09160;Dbxref=NCBI_GP:OFJ75736.1;Name=OFJ75736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582118.1;locus_tag=HMPREF2844_09160;product=(Fe-S)-binding protein;protein_id=OFJ75736.1;transl_table=11 KV808262.1 Genbank gene 16097 17956 . + . ID=gene-HMPREF2844_09165;Name=HMPREF2844_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09165 KV808262.1 Protein Homology CDS 16097 17956 . + 0 ID=cds-OFJ75737.1;Parent=gene-HMPREF2844_09165;Dbxref=NCBI_GP:OFJ75737.1;Name=OFJ75737.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448882.1;locus_tag=HMPREF2844_09165;product=dihydroxy-acid dehydratase;protein_id=OFJ75737.1;transl_table=11 KV808262.1 Genbank gene 18209 18688 . + . ID=gene-HMPREF2844_09170;Name=HMPREF2844_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09170 KV808262.1 Protein Homology CDS 18209 18688 . + 0 ID=cds-OFJ75738.1;Parent=gene-HMPREF2844_09170;Dbxref=NCBI_GP:OFJ75738.1;Name=OFJ75738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679071.1;locus_tag=HMPREF2844_09170;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFJ75738.1;transl_table=11 KV808262.1 Genbank gene 18759 19430 . + . ID=gene-HMPREF2844_09175;Name=HMPREF2844_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09175 KV808262.1 Protein Homology CDS 18759 19430 . + 0 ID=cds-OFJ75739.1;Parent=gene-HMPREF2844_09175;Dbxref=NCBI_GP:OFJ75739.1;Name=OFJ75739.1;Note=catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746943.1;locus_tag=HMPREF2844_09175;product=ribose-5-phosphate isomerase;protein_id=OFJ75739.1;transl_table=11 KV808262.1 Genbank gene 19500 20222 . + . ID=gene-HMPREF2844_09180;Name=HMPREF2844_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09180 KV808262.1 Protein Homology CDS 19500 20222 . + 0 ID=cds-OFJ75740.1;Parent=gene-HMPREF2844_09180;Dbxref=NCBI_GP:OFJ75740.1;Name=OFJ75740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778194.1;locus_tag=HMPREF2844_09180;product=nuclease;protein_id=OFJ75740.1;transl_table=11 KV808262.1 Genbank gene 21334 23169 . - . ID=gene-HMPREF2844_09185;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF2844_09185 KV808262.1 Protein Homology CDS 21334 23169 . - 0 ID=cds-OFJ75699.1;Parent=gene-HMPREF2844_09185;Dbxref=NCBI_GP:OFJ75699.1;Name=OFJ75699.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688152.1;locus_tag=HMPREF2844_09185;product=excinuclease ABC subunit C;protein_id=OFJ75699.1;transl_table=11 KV808262.1 Genbank gene 23308 23628 . - . ID=gene-HMPREF2844_09190;Name=HMPREF2844_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09190 KV808262.1 Protein Homology CDS 23308 23628 . - 0 ID=cds-OFJ75700.1;Parent=gene-HMPREF2844_09190;Dbxref=NCBI_GP:OFJ75700.1;Name=OFJ75700.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273389.1;locus_tag=HMPREF2844_09190;product=stress response protein;protein_id=OFJ75700.1;transl_table=11 KV808262.1 Genbank gene 23708 24643 . - . ID=gene-HMPREF2844_09195;Name=HMPREF2844_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09195 KV808262.1 Protein Homology CDS 23708 24643 . - 0 ID=cds-OFJ75701.1;Parent=gene-HMPREF2844_09195;Dbxref=NCBI_GP:OFJ75701.1;Name=OFJ75701.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002224013.1;locus_tag=HMPREF2844_09195;product=RNA polymerase subunit sigma;protein_id=OFJ75701.1;transl_table=11 KV808262.1 Genbank gene 25140 25823 . - . ID=gene-HMPREF2844_09200;Name=HMPREF2844_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09200 KV808262.1 Protein Homology CDS 25140 25823 . - 0 ID=cds-OFJ75702.1;Parent=gene-HMPREF2844_09200;Dbxref=NCBI_GP:OFJ75702.1;Name=OFJ75702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220881.1;locus_tag=HMPREF2844_09200;product=16S rRNA pseudouridine(516) synthase;protein_id=OFJ75702.1;transl_table=11 KV808262.1 Genbank gene 25864 26982 . - . ID=gene-HMPREF2844_09205;Name=HMPREF2844_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09205 KV808262.1 Protein Homology CDS 25864 26982 . - 0 ID=cds-OFJ75703.1;Parent=gene-HMPREF2844_09205;Dbxref=NCBI_GP:OFJ75703.1;Name=OFJ75703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743136.1;locus_tag=HMPREF2844_09205;product=methyltransferase;protein_id=OFJ75703.1;transl_table=11 KV808262.1 Genbank gene 27191 28405 . + . ID=gene-HMPREF2844_09210;Name=HMPREF2844_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09210 KV808262.1 Protein Homology CDS 27191 28405 . + 0 ID=cds-OFJ75704.1;Parent=gene-HMPREF2844_09210;Dbxref=NCBI_GP:OFJ75704.1;Name=OFJ75704.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448754.1;locus_tag=HMPREF2844_09210;product=aminotransferase;protein_id=OFJ75704.1;transl_table=11 KV808262.1 Genbank gene 28521 28883 . + . ID=gene-HMPREF2844_09215;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=HMPREF2844_09215 KV808262.1 cmsearch tmRNA 28521 28883 . + . ID=rna-HMPREF2844_09215;Parent=gene-HMPREF2844_09215;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_09215;product=transfer-messenger RNA KV808262.1 cmsearch exon 28521 28883 . + . ID=exon-HMPREF2844_09215-1;Parent=rna-HMPREF2844_09215;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2844_09215;product=transfer-messenger RNA KV808262.1 Genbank gene 30036 30224 . - . ID=gene-HMPREF2844_09220;Name=HMPREF2844_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09220 KV808262.1 Protein Homology CDS 30036 30224 . - 0 ID=cds-OFJ75705.1;Parent=gene-HMPREF2844_09220;Dbxref=NCBI_GP:OFJ75705.1;Name=OFJ75705.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003782610.1;locus_tag=HMPREF2844_09220;product=excisionase;protein_id=OFJ75705.1;transl_table=11 KV808262.1 Genbank gene 31522 32415 . - . ID=gene-HMPREF2844_09225;Name=HMPREF2844_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09225 KV808262.1 Protein Homology CDS 31522 32415 . - 0 ID=cds-OFJ75706.1;Parent=gene-HMPREF2844_09225;Dbxref=NCBI_GP:OFJ75706.1;Name=OFJ75706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003782608.1;locus_tag=HMPREF2844_09225;product=metallophosphoesterase;protein_id=OFJ75706.1;transl_table=11 KV808262.1 Genbank pseudogene 32565 33038 . + . ID=gene-HMPREF2844_09230;Name=HMPREF2844_09230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09230;pseudo=true KV808262.1 Protein Homology CDS 32565 33038 . + 0 ID=cds-HMPREF2844_09230;Parent=gene-HMPREF2844_09230;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003822112.1;locus_tag=HMPREF2844_09230;product=hypothetical protein;pseudo=true;transl_table=11 KV808262.1 Genbank gene 33295 33525 . + . ID=gene-HMPREF2844_09235;Name=HMPREF2844_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09235 KV808262.1 GeneMarkS+ CDS 33295 33525 . + 0 ID=cds-OFJ75707.1;Parent=gene-HMPREF2844_09235;Dbxref=NCBI_GP:OFJ75707.1;Name=OFJ75707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09235;product=hypothetical protein;protein_id=OFJ75707.1;transl_table=11 KV808262.1 Genbank gene 34722 35951 . + . ID=gene-HMPREF2844_09240;Name=HMPREF2844_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09240 KV808262.1 Protein Homology CDS 34722 35951 . + 0 ID=cds-OFJ75708.1;Parent=gene-HMPREF2844_09240;Dbxref=NCBI_GP:OFJ75708.1;Name=OFJ75708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755178.1;locus_tag=HMPREF2844_09240;product=ATPase;protein_id=OFJ75708.1;transl_table=11 KV808262.1 Genbank pseudogene 36042 36431 . + . ID=gene-HMPREF2844_09245;Name=HMPREF2844_09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09245;pseudo=true KV808262.1 Protein Homology CDS 36042 36431 . + 0 ID=cds-HMPREF2844_09245;Parent=gene-HMPREF2844_09245;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783694.1;locus_tag=HMPREF2844_09245;product=hypothetical protein;pseudo=true;transl_table=11 KV808262.1 Genbank pseudogene 36532 36965 . + . ID=gene-HMPREF2844_09250;Name=HMPREF2844_09250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09250;pseudo=true KV808262.1 Protein Homology CDS 36532 36965 . + 2 ID=cds-HMPREF2844_09250;Parent=gene-HMPREF2844_09250;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783694.1;locus_tag=HMPREF2844_09250;product=hypothetical protein;pseudo=true;transl_table=11 KV808262.1 Genbank gene 37077 37522 . + . ID=gene-HMPREF2844_09255;Name=HMPREF2844_09255;end_range=37522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09255;partial=true KV808262.1 Protein Homology CDS 37077 37522 . + 0 ID=cds-OFJ75698.1;Parent=gene-HMPREF2844_09255;Dbxref=NCBI_GP:OFJ75698.1;Name=OFJ75698.1;end_range=37522,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756627.1;locus_tag=HMPREF2844_09255;partial=true;product=phosphoesterase;protein_id=OFJ75698.1;transl_table=11 ##sequence-region KV808263.1 1 13979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808263.1 Genbank region 1 13979 . + . ID=KV808263.1:1..13979;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808263.1 Genbank pseudogene 1 233 . - . ID=gene-HMPREF2844_09260;Name=HMPREF2844_09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09260;pseudo=true KV808263.1 Protein Homology CDS 1 233 . - 0 ID=cds-HMPREF2844_09260;Parent=gene-HMPREF2844_09260;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002261213.1;locus_tag=HMPREF2844_09260;product=hypothetical protein;pseudo=true;transl_table=11 KV808263.1 Genbank gene 437 1204 . - . ID=gene-HMPREF2844_09265;Name=HMPREF2844_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09265 KV808263.1 Protein Homology CDS 437 1204 . - 0 ID=cds-OFJ75503.1;Parent=gene-HMPREF2844_09265;Dbxref=NCBI_GP:OFJ75503.1;Name=OFJ75503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743829.1;locus_tag=HMPREF2844_09265;product=molybdopterin-synthase adenylyltransferase;protein_id=OFJ75503.1;transl_table=11 KV808263.1 Genbank gene 1637 2611 . + . ID=gene-HMPREF2844_09270;Name=HMPREF2844_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09270 KV808263.1 Protein Homology CDS 1637 2611 . + 0 ID=cds-OFJ75513.1;Parent=gene-HMPREF2844_09270;Dbxref=NCBI_GP:OFJ75513.1;Name=OFJ75513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017201296.1;locus_tag=HMPREF2844_09270;product=iron ABC transporter permease;protein_id=OFJ75513.1;transl_table=11 KV808263.1 Genbank gene 2652 3599 . + . ID=gene-HMPREF2844_09275;Name=HMPREF2844_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09275 KV808263.1 Protein Homology CDS 2652 3599 . + 0 ID=cds-OFJ75512.1;Parent=gene-HMPREF2844_09275;Dbxref=NCBI_GP:OFJ75512.1;Name=OFJ75512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003790022.1;locus_tag=HMPREF2844_09275;product=iron ABC transporter permease;protein_id=OFJ75512.1;transl_table=11 KV808263.1 Genbank gene 3773 5638 . + . ID=gene-HMPREF2844_09280;Name=HMPREF2844_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09280 KV808263.1 Protein Homology CDS 3773 5638 . + 0 ID=cds-OFJ75504.1;Parent=gene-HMPREF2844_09280;Dbxref=NCBI_GP:OFJ75504.1;Name=OFJ75504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743834.1;locus_tag=HMPREF2844_09280;product=acetyltransferase;protein_id=OFJ75504.1;transl_table=11 KV808263.1 Genbank gene 5697 6320 . + . ID=gene-HMPREF2844_09285;Name=HMPREF2844_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09285 KV808263.1 Protein Homology CDS 5697 6320 . + 0 ID=cds-OFJ75505.1;Parent=gene-HMPREF2844_09285;Dbxref=NCBI_GP:OFJ75505.1;Name=OFJ75505.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271858.1;locus_tag=HMPREF2844_09285;product=hypothetical protein;protein_id=OFJ75505.1;transl_table=11 KV808263.1 Genbank gene 6393 7151 . + . ID=gene-HMPREF2844_09290;Name=HMPREF2844_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09290 KV808263.1 Protein Homology CDS 6393 7151 . + 0 ID=cds-OFJ75506.1;Parent=gene-HMPREF2844_09290;Dbxref=NCBI_GP:OFJ75506.1;Name=OFJ75506.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678423.1;locus_tag=HMPREF2844_09290;product=iron ABC transporter ATP-binding protein;protein_id=OFJ75506.1;transl_table=11 KV808263.1 Genbank gene 7439 7666 . + . ID=gene-HMPREF2844_09295;Name=HMPREF2844_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09295 KV808263.1 Protein Homology CDS 7439 7666 . + 0 ID=cds-OFJ75514.1;Parent=gene-HMPREF2844_09295;Dbxref=NCBI_GP:OFJ75514.1;Name=OFJ75514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232975.1;locus_tag=HMPREF2844_09295;product=hypothetical protein;protein_id=OFJ75514.1;transl_table=11 KV808263.1 Genbank gene 7867 8910 . - . ID=gene-HMPREF2844_09300;Name=HMPREF2844_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09300 KV808263.1 Protein Homology CDS 7867 8910 . - 0 ID=cds-OFJ75507.1;Parent=gene-HMPREF2844_09300;Dbxref=NCBI_GP:OFJ75507.1;Name=OFJ75507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686611.1;locus_tag=HMPREF2844_09300;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=OFJ75507.1;transl_table=11 KV808263.1 Genbank gene 9089 10168 . + . ID=gene-HMPREF2844_09305;Name=HMPREF2844_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09305 KV808263.1 Protein Homology CDS 9089 10168 . + 0 ID=cds-OFJ75508.1;Parent=gene-HMPREF2844_09305;Dbxref=NCBI_GP:OFJ75508.1;Name=OFJ75508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017146699.1;locus_tag=HMPREF2844_09305;product=ATP-binding protein;protein_id=OFJ75508.1;transl_table=11 KV808263.1 Genbank gene 10339 10414 . + . ID=gene-HMPREF2844_09310;Name=HMPREF2844_09310;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_09310 KV808263.1 tRNAscan-SE tRNA 10339 10414 . + . ID=rna-HMPREF2844_09310;Parent=gene-HMPREF2844_09310;anticodon=(pos:10372..10374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09310;product=tRNA-Lys KV808263.1 tRNAscan-SE exon 10339 10414 . + . ID=exon-HMPREF2844_09310-1;Parent=rna-HMPREF2844_09310;anticodon=(pos:10372..10374);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09310;product=tRNA-Lys KV808263.1 Genbank gene 10743 11936 . - . ID=gene-HMPREF2844_09315;Name=HMPREF2844_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09315 KV808263.1 Protein Homology CDS 10743 11936 . - 0 ID=cds-OFJ75509.1;Parent=gene-HMPREF2844_09315;Dbxref=NCBI_GP:OFJ75509.1;Name=OFJ75509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217853.1;locus_tag=HMPREF2844_09315;product=aromatic amino acid aminotransferase;protein_id=OFJ75509.1;transl_table=11 KV808263.1 Genbank gene 12040 12450 . - . ID=gene-HMPREF2844_09320;Name=HMPREF2844_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09320 KV808263.1 Protein Homology CDS 12040 12450 . - 0 ID=cds-OFJ75510.1;Parent=gene-HMPREF2844_09320;Dbxref=NCBI_GP:OFJ75510.1;Name=OFJ75510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687456.1;locus_tag=HMPREF2844_09320;product=hypothetical protein;protein_id=OFJ75510.1;transl_table=11 KV808263.1 Genbank gene 12707 13930 . + . ID=gene-HMPREF2844_09325;Name=HMPREF2844_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09325 KV808263.1 Protein Homology CDS 12707 13930 . + 0 ID=cds-OFJ75511.1;Parent=gene-HMPREF2844_09325;Dbxref=NCBI_GP:OFJ75511.1;Name=OFJ75511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685299.1;locus_tag=HMPREF2844_09325;product=MFS transporter;protein_id=OFJ75511.1;transl_table=11 ##sequence-region KV808264.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808264.1 Genbank region 1 240 . + . ID=KV808264.1:1..240;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808264.1 Genbank pseudogene 1 240 . + . ID=gene-HMPREF2844_09330;Name=HMPREF2844_09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09330;pseudo=true KV808264.1 Protein Homology CDS 1 240 . + 1 ID=cds-HMPREF2844_09330;Parent=gene-HMPREF2844_09330;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273617.1;locus_tag=HMPREF2844_09330;product=RHS family protein;pseudo=true;transl_table=11 ##sequence-region KV808265.1 1 18201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808265.1 Genbank region 1 18201 . + . ID=KV808265.1:1..18201;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808265.1 Genbank gene 60 323 . - . ID=gene-HMPREF2844_09335;Name=HMPREF2844_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09335 KV808265.1 Protein Homology CDS 60 323 . - 0 ID=cds-OFJ88571.1;Parent=gene-HMPREF2844_09335;Dbxref=NCBI_GP:OFJ88571.1;Name=OFJ88571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762327.1;locus_tag=HMPREF2844_09335;product=hypothetical protein;protein_id=OFJ88571.1;transl_table=11 KV808265.1 Genbank gene 545 970 . + . ID=gene-HMPREF2844_09340;Name=HMPREF2844_09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09340 KV808265.1 Protein Homology CDS 545 970 . + 0 ID=cds-OFJ88572.1;Parent=gene-HMPREF2844_09340;Dbxref=NCBI_GP:OFJ88572.1;Name=OFJ88572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270154.1;locus_tag=HMPREF2844_09340;product=hypothetical protein;protein_id=OFJ88572.1;transl_table=11 KV808265.1 Genbank gene 1034 1498 . + . ID=gene-HMPREF2844_09345;Name=HMPREF2844_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09345 KV808265.1 Protein Homology CDS 1034 1498 . + 0 ID=cds-OFJ88573.1;Parent=gene-HMPREF2844_09345;Dbxref=NCBI_GP:OFJ88573.1;Name=OFJ88573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003749055.1;locus_tag=HMPREF2844_09345;product=adenylate cyclase;protein_id=OFJ88573.1;transl_table=11 KV808265.1 Genbank gene 1844 3166 . - . ID=gene-HMPREF2844_09350;Name=HMPREF2844_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09350 KV808265.1 Protein Homology CDS 1844 3166 . - 0 ID=cds-OFJ88574.1;Parent=gene-HMPREF2844_09350;Dbxref=NCBI_GP:OFJ88574.1;Name=OFJ88574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002260835.1;locus_tag=HMPREF2844_09350;product=murein transglycosylase;protein_id=OFJ88574.1;transl_table=11 KV808265.1 Genbank gene 3664 4500 . + . ID=gene-HMPREF2844_09355;Name=HMPREF2844_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09355 KV808265.1 Protein Homology CDS 3664 4500 . + 0 ID=cds-OFJ88575.1;Parent=gene-HMPREF2844_09355;Dbxref=NCBI_GP:OFJ88575.1;Name=OFJ88575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312979.1;locus_tag=HMPREF2844_09355;product=iron transporter;protein_id=OFJ88575.1;transl_table=11 KV808265.1 Genbank gene 4575 5738 . + . ID=gene-HMPREF2844_09360;Name=HMPREF2844_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09360 KV808265.1 Protein Homology CDS 4575 5738 . + 0 ID=cds-OFJ88576.1;Parent=gene-HMPREF2844_09360;Dbxref=NCBI_GP:OFJ88576.1;Name=OFJ88576.1;Note=with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247121.1;locus_tag=HMPREF2844_09360;product=ferrous iron transporter;protein_id=OFJ88576.1;transl_table=11 KV808265.1 Genbank gene 6034 7305 . + . ID=gene-HMPREF2844_09365;Name=HMPREF2844_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09365 KV808265.1 Protein Homology CDS 6034 7305 . + 0 ID=cds-OFJ88577.1;Parent=gene-HMPREF2844_09365;Dbxref=NCBI_GP:OFJ88577.1;Name=OFJ88577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766606.1;locus_tag=HMPREF2844_09365;product=peroxidase;protein_id=OFJ88577.1;transl_table=11 KV808265.1 Genbank gene 7848 8096 . - . ID=gene-HMPREF2844_09370;Name=HMPREF2844_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09370 KV808265.1 Protein Homology CDS 7848 8096 . - 0 ID=cds-OFJ88579.1;Parent=gene-HMPREF2844_09370;Dbxref=NCBI_GP:OFJ88579.1;Name=OFJ88579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002218280.1;locus_tag=HMPREF2844_09370;product=BolA family transcriptional regulator;protein_id=OFJ88579.1;transl_table=11 KV808265.1 Genbank gene 8669 15494 . + . ID=gene-HMPREF2844_09375;Name=HMPREF2844_09375;end_range=15494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09375;partial=true KV808265.1 GeneMarkS+ CDS 8669 15494 . + 0 ID=cds-OFJ88578.1;Parent=gene-HMPREF2844_09375;Dbxref=NCBI_GP:OFJ88578.1;Name=OFJ88578.1;end_range=15494,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09375;partial=true;product=hypothetical protein;protein_id=OFJ88578.1;transl_table=11 KV808265.1 Genbank gene 15966 16247 . + . ID=gene-HMPREF2844_09380;Name=HMPREF2844_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09380 KV808265.1 Protein Homology CDS 15966 16247 . + 0 ID=cds-OFJ88520.1;Parent=gene-HMPREF2844_09380;Dbxref=NCBI_GP:OFJ88520.1;Name=OFJ88520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780365.1;locus_tag=HMPREF2844_09380;product=hemagglutinin;protein_id=OFJ88520.1;transl_table=11 KV808265.1 Genbank gene 16544 17587 . + . ID=gene-HMPREF2844_09385;Name=HMPREF2844_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09385 KV808265.1 Protein Homology CDS 16544 17587 . + 0 ID=cds-OFJ88519.1;Parent=gene-HMPREF2844_09385;Dbxref=NCBI_GP:OFJ88519.1;Name=OFJ88519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003780363.1;locus_tag=HMPREF2844_09385;product=2-nitropropane dioxygenase;protein_id=OFJ88519.1;transl_table=11 ##sequence-region KV808266.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808266.1 Genbank region 1 962 . + . ID=KV808266.1:1..962;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808266.1 Genbank pseudogene 1 424 . - . ID=gene-HMPREF2844_09390;Name=HMPREF2844_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09390;pseudo=true KV808266.1 GeneMarkS+ CDS 1 424 . - 2 ID=cds-HMPREF2844_09390;Parent=gene-HMPREF2844_09390;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09390;product=hypothetical protein;pseudo=true;transl_table=11 KV808266.1 Genbank pseudogene 525 957 . - . ID=gene-HMPREF2844_09395;Name=HMPREF2844_09395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09395;pseudo=true KV808266.1 GeneMarkS+ CDS 525 957 . - 0 ID=cds-HMPREF2844_09395;Parent=gene-HMPREF2844_09395;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09395;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808267.1 1 205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808267.1 Genbank region 1 205 . + . ID=KV808267.1:1..205;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808267.1 Genbank pseudogene 1 205 . - . ID=gene-HMPREF2844_09400;Name=HMPREF2844_09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09400;pseudo=true KV808267.1 Protein Homology CDS 1 205 . - 0 ID=cds-HMPREF2844_09400;Parent=gene-HMPREF2844_09400;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760212.1;locus_tag=HMPREF2844_09400;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV808268.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808268.1 Genbank region 1 371 . + . ID=KV808268.1:1..371;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808268.1 Genbank pseudogene 1 371 . - . ID=gene-HMPREF2844_09405;Name=HMPREF2844_09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09405;pseudo=true KV808268.1 Protein Homology CDS 1 371 . - 0 ID=cds-HMPREF2844_09405;Parent=gene-HMPREF2844_09405;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581191.1;locus_tag=HMPREF2844_09405;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV808269.1 1 57325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808269.1 Genbank region 1 57325 . + . ID=KV808269.1:1..57325;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808269.1 Genbank gene 52 513 . + . ID=gene-HMPREF2844_09410;Name=HMPREF2844_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09410 KV808269.1 Protein Homology CDS 52 513 . + 0 ID=cds-OFJ88351.1;Parent=gene-HMPREF2844_09410;Dbxref=NCBI_GP:OFJ88351.1;Name=OFJ88351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520346.1;locus_tag=HMPREF2844_09410;product=YhcH/YjgK/YiaL family protein;protein_id=OFJ88351.1;transl_table=11 KV808269.1 Genbank gene 551 1414 . + . ID=gene-HMPREF2844_09415;Name=HMPREF2844_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09415 KV808269.1 Protein Homology CDS 551 1414 . + 0 ID=cds-OFJ88352.1;Parent=gene-HMPREF2844_09415;Dbxref=NCBI_GP:OFJ88352.1;Name=OFJ88352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686337.1;locus_tag=HMPREF2844_09415;product=hypothetical protein;protein_id=OFJ88352.1;transl_table=11 KV808269.1 Genbank gene 1481 2551 . + . ID=gene-HMPREF2844_09420;Name=HMPREF2844_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09420 KV808269.1 Protein Homology CDS 1481 2551 . + 0 ID=cds-OFJ88353.1;Parent=gene-HMPREF2844_09420;Dbxref=NCBI_GP:OFJ88353.1;Name=OFJ88353.1;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311437.1;locus_tag=HMPREF2844_09420;product=3-isopropylmalate dehydrogenase;protein_id=OFJ88353.1;transl_table=11 KV808269.1 Genbank gene 2971 3327 . + . ID=gene-HMPREF2844_09425;Name=HMPREF2844_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09425 KV808269.1 Protein Homology CDS 2971 3327 . + 0 ID=cds-OFJ88373.1;Parent=gene-HMPREF2844_09425;Dbxref=NCBI_GP:OFJ88373.1;Name=OFJ88373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742183.1;locus_tag=HMPREF2844_09425;product=hypothetical protein;protein_id=OFJ88373.1;transl_table=11 KV808269.1 Genbank gene 3414 4436 . + . ID=gene-HMPREF2844_09430;Name=HMPREF2844_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09430 KV808269.1 Protein Homology CDS 3414 4436 . + 0 ID=cds-OFJ88354.1;Parent=gene-HMPREF2844_09430;Dbxref=NCBI_GP:OFJ88354.1;Name=OFJ88354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687940.1;locus_tag=HMPREF2844_09430;product=hypothetical protein;protein_id=OFJ88354.1;transl_table=11 KV808269.1 Genbank gene 4701 6122 . + . ID=gene-HMPREF2844_09435;Name=HMPREF2844_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09435 KV808269.1 Protein Homology CDS 4701 6122 . + 0 ID=cds-OFJ88374.1;Parent=gene-HMPREF2844_09435;Dbxref=NCBI_GP:OFJ88374.1;Name=OFJ88374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678712.1;locus_tag=HMPREF2844_09435;product=hypothetical protein;protein_id=OFJ88374.1;transl_table=11 KV808269.1 Genbank gene 6284 6676 . + . ID=gene-HMPREF2844_09440;Name=HMPREF2844_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09440 KV808269.1 Protein Homology CDS 6284 6676 . + 0 ID=cds-OFJ88355.1;Parent=gene-HMPREF2844_09440;Dbxref=NCBI_GP:OFJ88355.1;Name=OFJ88355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270070.1;locus_tag=HMPREF2844_09440;product=S-adenosylmethionine decarboxylase proenzyme;protein_id=OFJ88355.1;transl_table=11 KV808269.1 Genbank gene 6744 8354 . + . ID=gene-HMPREF2844_09445;Name=HMPREF2844_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09445 KV808269.1 Protein Homology CDS 6744 8354 . + 0 ID=cds-OFJ88356.1;Parent=gene-HMPREF2844_09445;Dbxref=NCBI_GP:OFJ88356.1;Name=OFJ88356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270069.1;locus_tag=HMPREF2844_09445;product=twin-arginine translocation pathway signal;protein_id=OFJ88356.1;transl_table=11 KV808269.1 Genbank gene 8477 8917 . + . ID=gene-HMPREF2844_09450;Name=HMPREF2844_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09450 KV808269.1 Protein Homology CDS 8477 8917 . + 0 ID=cds-OFJ88357.1;Parent=gene-HMPREF2844_09450;Dbxref=NCBI_GP:OFJ88357.1;Name=OFJ88357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312192.1;locus_tag=HMPREF2844_09450;product=DNA polymerase III subunit chi;protein_id=OFJ88357.1;transl_table=11 KV808269.1 Genbank gene 9047 9868 . + . ID=gene-HMPREF2844_09455;Name=HMPREF2844_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09455 KV808269.1 Protein Homology CDS 9047 9868 . + 0 ID=cds-OFJ88358.1;Parent=gene-HMPREF2844_09455;Dbxref=NCBI_GP:OFJ88358.1;Name=OFJ88358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779084.1;locus_tag=HMPREF2844_09455;product=peptidylprolyl isomerase;protein_id=OFJ88358.1;transl_table=11 KV808269.1 Genbank gene 10086 10712 . + . ID=gene-HMPREF2844_09460;Name=HMPREF2844_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09460 KV808269.1 Protein Homology CDS 10086 10712 . + 0 ID=cds-OFJ88359.1;Parent=gene-HMPREF2844_09460;Dbxref=NCBI_GP:OFJ88359.1;Name=OFJ88359.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312194.1;locus_tag=HMPREF2844_09460;product=phosphoribosylglycinamide formyltransferase;protein_id=OFJ88359.1;transl_table=11 KV808269.1 Genbank gene 10750 11787 . + . ID=gene-HMPREF2844_09465;Name=HMPREF2844_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09465 KV808269.1 Protein Homology CDS 10750 11787 . + 0 ID=cds-OFJ88360.1;Parent=gene-HMPREF2844_09465;Dbxref=NCBI_GP:OFJ88360.1;Name=OFJ88360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270065.1;locus_tag=HMPREF2844_09465;product=hypothetical protein;protein_id=OFJ88360.1;transl_table=11 KV808269.1 Genbank gene 11839 12507 . + . ID=gene-HMPREF2844_09470;Name=HMPREF2844_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09470 KV808269.1 Protein Homology CDS 11839 12507 . + 0 ID=cds-OFJ88361.1;Parent=gene-HMPREF2844_09470;Dbxref=NCBI_GP:OFJ88361.1;Name=OFJ88361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742195.1;locus_tag=HMPREF2844_09470;product=hypothetical protein;protein_id=OFJ88361.1;transl_table=11 KV808269.1 Genbank gene 12570 13397 . - . ID=gene-HMPREF2844_09475;Name=HMPREF2844_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09475 KV808269.1 Protein Homology CDS 12570 13397 . - 0 ID=cds-OFJ88362.1;Parent=gene-HMPREF2844_09475;Dbxref=NCBI_GP:OFJ88362.1;Name=OFJ88362.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019272570.1;locus_tag=HMPREF2844_09475;product=NAD(P)-dependent oxidoreductase;protein_id=OFJ88362.1;transl_table=11 KV808269.1 Genbank gene 13524 13982 . + . ID=gene-HMPREF2844_09480;Name=HMPREF2844_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09480 KV808269.1 Protein Homology CDS 13524 13982 . + 0 ID=cds-OFJ88363.1;Parent=gene-HMPREF2844_09480;Dbxref=NCBI_GP:OFJ88363.1;Name=OFJ88363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763338.1;locus_tag=HMPREF2844_09480;product=cytochrome C;protein_id=OFJ88363.1;transl_table=11 KV808269.1 Genbank gene 14177 14395 . - . ID=gene-HMPREF2844_09485;Name=HMPREF2844_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09485 KV808269.1 Protein Homology CDS 14177 14395 . - 0 ID=cds-OFJ88364.1;Parent=gene-HMPREF2844_09485;Dbxref=NCBI_GP:OFJ88364.1;Name=OFJ88364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270061.1;locus_tag=HMPREF2844_09485;product=tautomerase;protein_id=OFJ88364.1;transl_table=11 KV808269.1 Genbank gene 14722 15711 . - . ID=gene-HMPREF2844_09490;Name=HMPREF2844_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09490 KV808269.1 Protein Homology CDS 14722 15711 . - 0 ID=cds-OFJ88365.1;Parent=gene-HMPREF2844_09490;Dbxref=NCBI_GP:OFJ88365.1;Name=OFJ88365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681044.1;locus_tag=HMPREF2844_09490;product=tRNA-dihydrouridine synthase C;protein_id=OFJ88365.1;transl_table=11 KV808269.1 Genbank gene 15849 17003 . + . ID=gene-HMPREF2844_09495;Name=HMPREF2844_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09495 KV808269.1 Protein Homology CDS 15849 17003 . + 0 ID=cds-OFJ88366.1;Parent=gene-HMPREF2844_09495;Dbxref=NCBI_GP:OFJ88366.1;Name=OFJ88366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003795408.1;locus_tag=HMPREF2844_09495;product=integrase;protein_id=OFJ88366.1;transl_table=11 KV808269.1 Genbank gene 17086 17595 . - . ID=gene-HMPREF2844_09500;Name=HMPREF2844_09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09500 KV808269.1 Protein Homology CDS 17086 17595 . - 0 ID=cds-OFJ88367.1;Parent=gene-HMPREF2844_09500;Dbxref=NCBI_GP:OFJ88367.1;Name=OFJ88367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219426.1;locus_tag=HMPREF2844_09500;product=hypothetical protein;protein_id=OFJ88367.1;transl_table=11 KV808269.1 Genbank gene 17607 18080 . - . ID=gene-HMPREF2844_09505;Name=HMPREF2844_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09505 KV808269.1 Protein Homology CDS 17607 18080 . - 0 ID=cds-OFJ88368.1;Parent=gene-HMPREF2844_09505;Dbxref=NCBI_GP:OFJ88368.1;Name=OFJ88368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002261809.1;locus_tag=HMPREF2844_09505;product=ATP-binding protein;protein_id=OFJ88368.1;transl_table=11 KV808269.1 Genbank gene 18221 18496 . - . ID=gene-HMPREF2844_09510;Name=HMPREF2844_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09510 KV808269.1 Protein Homology CDS 18221 18496 . - 0 ID=cds-OFJ88369.1;Parent=gene-HMPREF2844_09510;Dbxref=NCBI_GP:OFJ88369.1;Name=OFJ88369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256151.1;locus_tag=HMPREF2844_09510;product=hypothetical protein;protein_id=OFJ88369.1;transl_table=11 KV808269.1 Genbank gene 18493 18918 . - . ID=gene-HMPREF2844_09515;Name=HMPREF2844_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09515 KV808269.1 Protein Homology CDS 18493 18918 . - 0 ID=cds-OFJ88370.1;Parent=gene-HMPREF2844_09515;Dbxref=NCBI_GP:OFJ88370.1;Name=OFJ88370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217444.1;locus_tag=HMPREF2844_09515;product=hypothetical protein;protein_id=OFJ88370.1;transl_table=11 KV808269.1 Genbank gene 18982 19392 . - . ID=gene-HMPREF2844_09520;Name=HMPREF2844_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09520 KV808269.1 Protein Homology CDS 18982 19392 . - 0 ID=cds-OFJ88371.1;Parent=gene-HMPREF2844_09520;Dbxref=NCBI_GP:OFJ88371.1;Name=OFJ88371.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757695.1;locus_tag=HMPREF2844_09520;product=hypothetical protein;protein_id=OFJ88371.1;transl_table=11 KV808269.1 Genbank gene 19644 20090 . - . ID=gene-HMPREF2844_09525;Name=HMPREF2844_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09525 KV808269.1 Protein Homology CDS 19644 20090 . - 0 ID=cds-OFJ88372.1;Parent=gene-HMPREF2844_09525;Dbxref=NCBI_GP:OFJ88372.1;Name=OFJ88372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220718.1;locus_tag=HMPREF2844_09525;product=hypothetical protein;protein_id=OFJ88372.1;transl_table=11 KV808269.1 Genbank pseudogene 20161 21576 . - . ID=gene-HMPREF2844_09530;Name=HMPREF2844_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09530;pseudo=true KV808269.1 Protein Homology CDS 20161 21576 . - 0 ID=cds-HMPREF2844_09530;Parent=gene-HMPREF2844_09530;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815476.1;locus_tag=HMPREF2844_09530;product=host specificity protein J;pseudo=true;transl_table=11 KV808269.1 Genbank pseudogene 22135 25614 . - . ID=gene-HMPREF2844_09535;Name=HMPREF2844_09535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09535;pseudo=true KV808269.1 Protein Homology CDS 22135 25614 . - 0 ID=cds-HMPREF2844_09535;Parent=gene-HMPREF2844_09535;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815476.1;locus_tag=HMPREF2844_09535;product=host specificity protein J;pseudo=true;transl_table=11 KV808269.1 Genbank gene 25750 26472 . - . ID=gene-HMPREF2844_09540;Name=HMPREF2844_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09540 KV808269.1 Protein Homology CDS 25750 26472 . - 0 ID=cds-OFJ88311.1;Parent=gene-HMPREF2844_09540;Dbxref=NCBI_GP:OFJ88311.1;Name=OFJ88311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757687.1;locus_tag=HMPREF2844_09540;product=phage tail protein;protein_id=OFJ88311.1;transl_table=11 KV808269.1 Genbank gene 26599 27354 . - . ID=gene-HMPREF2844_09545;Name=HMPREF2844_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09545 KV808269.1 Protein Homology CDS 26599 27354 . - 0 ID=cds-OFJ88312.1;Parent=gene-HMPREF2844_09545;Dbxref=NCBI_GP:OFJ88312.1;Name=OFJ88312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757685.1;locus_tag=HMPREF2844_09545;product=alkaline phosphatase;protein_id=OFJ88312.1;transl_table=11 KV808269.1 Genbank gene 27351 28073 . - . ID=gene-HMPREF2844_09550;Name=HMPREF2844_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09550 KV808269.1 Protein Homology CDS 27351 28073 . - 0 ID=cds-OFJ88313.1;Parent=gene-HMPREF2844_09550;Dbxref=NCBI_GP:OFJ88313.1;Name=OFJ88313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002247810.1;locus_tag=HMPREF2844_09550;product=phage tail protein;protein_id=OFJ88313.1;transl_table=11 KV808269.1 Genbank gene 28070 28402 . - . ID=gene-HMPREF2844_09555;Name=HMPREF2844_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09555 KV808269.1 Protein Homology CDS 28070 28402 . - 0 ID=cds-OFJ88314.1;Parent=gene-HMPREF2844_09555;Dbxref=NCBI_GP:OFJ88314.1;Name=OFJ88314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241433.1;locus_tag=HMPREF2844_09555;product=phage tail protein;protein_id=OFJ88314.1;transl_table=11 KV808269.1 Genbank gene 28424 31621 . - . ID=gene-HMPREF2844_09560;Name=HMPREF2844_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09560 KV808269.1 Protein Homology CDS 28424 31621 . - 0 ID=cds-OFJ88315.1;Parent=gene-HMPREF2844_09560;Dbxref=NCBI_GP:OFJ88315.1;Name=OFJ88315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815473.1;locus_tag=HMPREF2844_09560;product=phage tail protein;protein_id=OFJ88315.1;transl_table=11 KV808269.1 Genbank gene 31614 31886 . - . ID=gene-HMPREF2844_09565;Name=HMPREF2844_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09565 KV808269.1 Protein Homology CDS 31614 31886 . - 0 ID=cds-OFJ88316.1;Parent=gene-HMPREF2844_09565;Dbxref=NCBI_GP:OFJ88316.1;Name=OFJ88316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015815472.1;locus_tag=HMPREF2844_09565;product=hypothetical protein;protein_id=OFJ88316.1;transl_table=11 KV808269.1 Genbank gene 31934 32245 . - . ID=gene-HMPREF2844_09570;Name=HMPREF2844_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09570 KV808269.1 Protein Homology CDS 31934 32245 . - 0 ID=cds-OFJ88317.1;Parent=gene-HMPREF2844_09570;Dbxref=NCBI_GP:OFJ88317.1;Name=OFJ88317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217467.1;locus_tag=HMPREF2844_09570;product=hypothetical protein;protein_id=OFJ88317.1;transl_table=11 KV808269.1 Genbank gene 32309 32950 . - . ID=gene-HMPREF2844_09575;Name=HMPREF2844_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09575 KV808269.1 Protein Homology CDS 32309 32950 . - 0 ID=cds-OFJ88318.1;Parent=gene-HMPREF2844_09575;Dbxref=NCBI_GP:OFJ88318.1;Name=OFJ88318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002220708.1;locus_tag=HMPREF2844_09575;product=phage tail protein;protein_id=OFJ88318.1;transl_table=11 KV808269.1 Genbank gene 32982 33401 . - . ID=gene-HMPREF2844_09580;Name=HMPREF2844_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09580 KV808269.1 Protein Homology CDS 32982 33401 . - 0 ID=cds-OFJ88319.1;Parent=gene-HMPREF2844_09580;Dbxref=NCBI_GP:OFJ88319.1;Name=OFJ88319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757674.1;locus_tag=HMPREF2844_09580;product=hypothetical protein;protein_id=OFJ88319.1;transl_table=11 KV808269.1 Genbank gene 33382 33684 . - . ID=gene-HMPREF2844_09585;Name=HMPREF2844_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09585 KV808269.1 Protein Homology CDS 33382 33684 . - 0 ID=cds-OFJ88320.1;Parent=gene-HMPREF2844_09585;Dbxref=NCBI_GP:OFJ88320.1;Name=OFJ88320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174515.1;locus_tag=HMPREF2844_09585;product=hypothetical protein;protein_id=OFJ88320.1;transl_table=11 KV808269.1 Genbank gene 33677 33904 . - . ID=gene-HMPREF2844_09590;Name=HMPREF2844_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09590 KV808269.1 Protein Homology CDS 33677 33904 . - 0 ID=cds-OFJ88321.1;Parent=gene-HMPREF2844_09590;Dbxref=NCBI_GP:OFJ88321.1;Name=OFJ88321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241428.1;locus_tag=HMPREF2844_09590;product=hypothetical protein;protein_id=OFJ88321.1;transl_table=11 KV808269.1 Genbank gene 33962 35845 . - . ID=gene-HMPREF2844_09595;Name=HMPREF2844_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09595 KV808269.1 Protein Homology CDS 33962 35845 . - 0 ID=cds-OFJ88322.1;Parent=gene-HMPREF2844_09595;Dbxref=NCBI_GP:OFJ88322.1;Name=OFJ88322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002241427.1;locus_tag=HMPREF2844_09595;product=major capsid protein;protein_id=OFJ88322.1;transl_table=11 KV808269.1 Genbank gene 35826 37388 . - . ID=gene-HMPREF2844_09600;Name=HMPREF2844_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09600 KV808269.1 Protein Homology CDS 35826 37388 . - 0 ID=cds-OFJ88323.1;Parent=gene-HMPREF2844_09600;Dbxref=NCBI_GP:OFJ88323.1;Name=OFJ88323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002244974.1;locus_tag=HMPREF2844_09600;product=phage portal protein;protein_id=OFJ88323.1;transl_table=11 KV808269.1 Genbank gene 37397 37651 . - . ID=gene-HMPREF2844_09605;Name=HMPREF2844_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09605 KV808269.1 Protein Homology CDS 37397 37651 . - 0 ID=cds-OFJ88324.1;Parent=gene-HMPREF2844_09605;Dbxref=NCBI_GP:OFJ88324.1;Name=OFJ88324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174519.1;locus_tag=HMPREF2844_09605;product=hypothetical protein;protein_id=OFJ88324.1;transl_table=11 KV808269.1 Genbank gene 37654 37860 . - . ID=gene-HMPREF2844_09610;Name=HMPREF2844_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09610 KV808269.1 Protein Homology CDS 37654 37860 . - 0 ID=cds-OFJ88325.1;Parent=gene-HMPREF2844_09610;Dbxref=NCBI_GP:OFJ88325.1;Name=OFJ88325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757661.1;locus_tag=HMPREF2844_09610;product=hypothetical protein;protein_id=OFJ88325.1;transl_table=11 KV808269.1 Genbank gene 38072 40099 . - . ID=gene-HMPREF2844_09615;Name=HMPREF2844_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09615 KV808269.1 Protein Homology CDS 38072 40099 . - 0 ID=cds-OFJ88326.1;Parent=gene-HMPREF2844_09615;Dbxref=NCBI_GP:OFJ88326.1;Name=OFJ88326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174522.1;locus_tag=HMPREF2844_09615;product=terminase;protein_id=OFJ88326.1;transl_table=11 KV808269.1 Genbank gene 40059 40550 . - . ID=gene-HMPREF2844_09620;Name=HMPREF2844_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09620 KV808269.1 Protein Homology CDS 40059 40550 . - 0 ID=cds-OFJ88327.1;Parent=gene-HMPREF2844_09620;Dbxref=NCBI_GP:OFJ88327.1;Name=OFJ88327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174523.1;locus_tag=HMPREF2844_09620;product=DNA packaging protein;protein_id=OFJ88327.1;transl_table=11 KV808269.1 Genbank gene 40651 41313 . - . ID=gene-HMPREF2844_09625;Name=HMPREF2844_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09625 KV808269.1 Protein Homology CDS 40651 41313 . - 0 ID=cds-OFJ88328.1;Parent=gene-HMPREF2844_09625;Dbxref=NCBI_GP:OFJ88328.1;Name=OFJ88328.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757651.1;locus_tag=HMPREF2844_09625;product=hypothetical protein;protein_id=OFJ88328.1;transl_table=11 KV808269.1 Genbank gene 41474 41854 . - . ID=gene-HMPREF2844_09630;Name=HMPREF2844_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09630 KV808269.1 Protein Homology CDS 41474 41854 . - 0 ID=cds-OFJ88329.1;Parent=gene-HMPREF2844_09630;Dbxref=NCBI_GP:OFJ88329.1;Name=OFJ88329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757649.1;locus_tag=HMPREF2844_09630;product=molecular chaperone DnaJ;protein_id=OFJ88329.1;transl_table=11 KV808269.1 Genbank gene 41988 42428 . - . ID=gene-HMPREF2844_09635;Name=HMPREF2844_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09635 KV808269.1 GeneMarkS+ CDS 41988 42428 . - 0 ID=cds-OFJ88330.1;Parent=gene-HMPREF2844_09635;Dbxref=NCBI_GP:OFJ88330.1;Name=OFJ88330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09635;product=hypothetical protein;protein_id=OFJ88330.1;transl_table=11 KV808269.1 Genbank gene 42432 42971 . - . ID=gene-HMPREF2844_09640;Name=HMPREF2844_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09640 KV808269.1 GeneMarkS+ CDS 42432 42971 . - 0 ID=cds-OFJ88331.1;Parent=gene-HMPREF2844_09640;Dbxref=NCBI_GP:OFJ88331.1;Name=OFJ88331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09640;product=hypothetical protein;protein_id=OFJ88331.1;transl_table=11 KV808269.1 Genbank gene 43312 44064 . + . ID=gene-HMPREF2844_09645;Name=HMPREF2844_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09645 KV808269.1 GeneMarkS+ CDS 43312 44064 . + 0 ID=cds-OFJ88332.1;Parent=gene-HMPREF2844_09645;Dbxref=NCBI_GP:OFJ88332.1;Name=OFJ88332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09645;product=hypothetical protein;protein_id=OFJ88332.1;transl_table=11 KV808269.1 Genbank gene 44211 44387 . + . ID=gene-HMPREF2844_09650;Name=HMPREF2844_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09650 KV808269.1 Protein Homology CDS 44211 44387 . + 0 ID=cds-OFJ88333.1;Parent=gene-HMPREF2844_09650;Dbxref=NCBI_GP:OFJ88333.1;Name=OFJ88333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010848235.1;locus_tag=HMPREF2844_09650;product=mRNA interferase;protein_id=OFJ88333.1;transl_table=11 KV808269.1 Genbank gene 44424 44840 . + . ID=gene-HMPREF2844_09655;Name=HMPREF2844_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09655 KV808269.1 Protein Homology CDS 44424 44840 . + 0 ID=cds-OFJ88334.1;Parent=gene-HMPREF2844_09655;Dbxref=NCBI_GP:OFJ88334.1;Name=OFJ88334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009174527.1;locus_tag=HMPREF2844_09655;product=antitoxin;protein_id=OFJ88334.1;transl_table=11 KV808269.1 Genbank gene 45233 48073 . - . ID=gene-HMPREF2844_09660;Name=HMPREF2844_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09660 KV808269.1 Protein Homology CDS 45233 48073 . - 0 ID=cds-OFJ88335.1;Parent=gene-HMPREF2844_09660;Dbxref=NCBI_GP:OFJ88335.1;Name=OFJ88335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757631.1;locus_tag=HMPREF2844_09660;product=hypothetical protein;protein_id=OFJ88335.1;transl_table=11 KV808269.1 Genbank gene 48526 49167 . + . ID=gene-HMPREF2844_09665;Name=HMPREF2844_09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09665 KV808269.1 Protein Homology CDS 48526 49167 . + 0 ID=cds-OFJ88336.1;Parent=gene-HMPREF2844_09665;Dbxref=NCBI_GP:OFJ88336.1;Name=OFJ88336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681026.1;locus_tag=HMPREF2844_09665;product=repressor protein;protein_id=OFJ88336.1;transl_table=11 KV808269.1 Genbank gene 49276 49566 . + . ID=gene-HMPREF2844_09670;Name=HMPREF2844_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09670 KV808269.1 GeneMarkS+ CDS 49276 49566 . + 0 ID=cds-OFJ88337.1;Parent=gene-HMPREF2844_09670;Dbxref=NCBI_GP:OFJ88337.1;Name=OFJ88337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09670;product=hypothetical protein;protein_id=OFJ88337.1;transl_table=11 KV808269.1 Genbank gene 49563 50705 . + . ID=gene-HMPREF2844_09675;Name=HMPREF2844_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09675 KV808269.1 Protein Homology CDS 49563 50705 . + 0 ID=cds-OFJ88338.1;Parent=gene-HMPREF2844_09675;Dbxref=NCBI_GP:OFJ88338.1;Name=OFJ88338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711998.1;locus_tag=HMPREF2844_09675;product=XRE family transcriptional regulator;protein_id=OFJ88338.1;transl_table=11 KV808269.1 Genbank gene 50698 51186 . + . ID=gene-HMPREF2844_09680;Name=HMPREF2844_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09680 KV808269.1 Protein Homology CDS 50698 51186 . + 0 ID=cds-OFJ88339.1;Parent=gene-HMPREF2844_09680;Dbxref=NCBI_GP:OFJ88339.1;Name=OFJ88339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003711999.1;locus_tag=HMPREF2844_09680;product=hypothetical protein;protein_id=OFJ88339.1;transl_table=11 KV808269.1 Genbank gene 51413 51613 . + . ID=gene-HMPREF2844_09685;Name=HMPREF2844_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09685 KV808269.1 Protein Homology CDS 51413 51613 . + 0 ID=cds-OFJ88340.1;Parent=gene-HMPREF2844_09685;Dbxref=NCBI_GP:OFJ88340.1;Name=OFJ88340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002244973.1;locus_tag=HMPREF2844_09685;product=hypothetical protein;protein_id=OFJ88340.1;transl_table=11 KV808269.1 Genbank gene 51739 51954 . + . ID=gene-HMPREF2844_09690;Name=HMPREF2844_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09690 KV808269.1 Protein Homology CDS 51739 51954 . + 0 ID=cds-OFJ88341.1;Parent=gene-HMPREF2844_09690;Dbxref=NCBI_GP:OFJ88341.1;Name=OFJ88341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757621.1;locus_tag=HMPREF2844_09690;product=hypothetical protein;protein_id=OFJ88341.1;transl_table=11 KV808269.1 Genbank gene 51966 52163 . + . ID=gene-HMPREF2844_09695;Name=HMPREF2844_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09695 KV808269.1 Protein Homology CDS 51966 52163 . + 0 ID=cds-OFJ88342.1;Parent=gene-HMPREF2844_09695;Dbxref=NCBI_GP:OFJ88342.1;Name=OFJ88342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757617.1;locus_tag=HMPREF2844_09695;product=hypothetical protein;protein_id=OFJ88342.1;transl_table=11 KV808269.1 Genbank gene 52413 52652 . + . ID=gene-HMPREF2844_09700;Name=HMPREF2844_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09700 KV808269.1 GeneMarkS+ CDS 52413 52652 . + 0 ID=cds-OFJ88343.1;Parent=gene-HMPREF2844_09700;Dbxref=NCBI_GP:OFJ88343.1;Name=OFJ88343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09700;product=hypothetical protein;protein_id=OFJ88343.1;transl_table=11 KV808269.1 Genbank gene 52655 52921 . + . ID=gene-HMPREF2844_09705;Name=HMPREF2844_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09705 KV808269.1 Protein Homology CDS 52655 52921 . + 0 ID=cds-OFJ88344.1;Parent=gene-HMPREF2844_09705;Dbxref=NCBI_GP:OFJ88344.1;Name=OFJ88344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757610.1;locus_tag=HMPREF2844_09705;product=transcriptional regulator;protein_id=OFJ88344.1;transl_table=11 KV808269.1 Genbank gene 52956 53207 . - . ID=gene-HMPREF2844_09710;Name=HMPREF2844_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09710 KV808269.1 Protein Homology CDS 52956 53207 . - 0 ID=cds-OFJ88345.1;Parent=gene-HMPREF2844_09710;Dbxref=NCBI_GP:OFJ88345.1;Name=OFJ88345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000478870.1;locus_tag=HMPREF2844_09710;product=hypothetical protein;protein_id=OFJ88345.1;transl_table=11 KV808269.1 Genbank gene 53204 53503 . - . ID=gene-HMPREF2844_09715;Name=HMPREF2844_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09715 KV808269.1 Protein Homology CDS 53204 53503 . - 0 ID=cds-OFJ88346.1;Parent=gene-HMPREF2844_09715;Dbxref=NCBI_GP:OFJ88346.1;Name=OFJ88346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000854876.1;locus_tag=HMPREF2844_09715;product=hypothetical protein;protein_id=OFJ88346.1;transl_table=11 KV808269.1 Genbank gene 53798 54751 . + . ID=gene-HMPREF2844_09720;Name=HMPREF2844_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09720 KV808269.1 Protein Homology CDS 53798 54751 . + 0 ID=cds-OFJ88349.1;Parent=gene-HMPREF2844_09720;Dbxref=NCBI_GP:OFJ88349.1;Name=OFJ88349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173654.1;locus_tag=HMPREF2844_09720;product=nucleoside hydrolase;protein_id=OFJ88349.1;transl_table=11 KV808269.1 Genbank gene 54800 56353 . + . ID=gene-HMPREF2844_09725;Name=HMPREF2844_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09725 KV808269.1 Protein Homology CDS 54800 56353 . + 0 ID=cds-OFJ88347.1;Parent=gene-HMPREF2844_09725;Dbxref=NCBI_GP:OFJ88347.1;Name=OFJ88347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757602.1;locus_tag=HMPREF2844_09725;product=glycosyl transferase;protein_id=OFJ88347.1;transl_table=11 KV808269.1 Genbank gene 56518 57279 . + . ID=gene-HMPREF2844_09730;Name=HMPREF2844_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09730 KV808269.1 Protein Homology CDS 56518 57279 . + 0 ID=cds-OFJ88348.1;Parent=gene-HMPREF2844_09730;Dbxref=NCBI_GP:OFJ88348.1;Name=OFJ88348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004284289.1;locus_tag=HMPREF2844_09730;product=hypothetical protein;protein_id=OFJ88348.1;transl_table=11 ##sequence-region KV808270.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808270.1 Genbank region 1 371 . + . ID=KV808270.1:1..371;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808270.1 Genbank pseudogene 1 371 . - . ID=gene-HMPREF2844_09735;Name=HMPREF2844_09735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09735;pseudo=true KV808270.1 Protein Homology CDS 1 371 . - 0 ID=cds-HMPREF2844_09735;Parent=gene-HMPREF2844_09735;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581191.1;locus_tag=HMPREF2844_09735;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV808271.1 1 22004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808271.1 Genbank region 1 22004 . + . ID=KV808271.1:1..22004;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808271.1 Genbank gene 184 1527 . + . ID=gene-HMPREF2844_09740;Name=HMPREF2844_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09740 KV808271.1 Protein Homology CDS 184 1527 . + 0 ID=cds-OFJ88015.1;Parent=gene-HMPREF2844_09740;Dbxref=NCBI_GP:OFJ88015.1;Name=OFJ88015.1;Note=Involved in disulfide oxidoreductase activity and electron transport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755202.1;locus_tag=HMPREF2844_09740;product=pyridine nucleotide-disulfide oxidoreductase;protein_id=OFJ88015.1;transl_table=11 KV808271.1 Genbank gene 1564 1788 . + . ID=gene-HMPREF2844_09745;Name=HMPREF2844_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09745 KV808271.1 Protein Homology CDS 1564 1788 . + 0 ID=cds-OFJ88016.1;Parent=gene-HMPREF2844_09745;Dbxref=NCBI_GP:OFJ88016.1;Name=OFJ88016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271706.1;locus_tag=HMPREF2844_09745;product=transposase;protein_id=OFJ88016.1;transl_table=11 KV808271.1 Genbank gene 1815 2183 . - . ID=gene-HMPREF2844_09750;Name=HMPREF2844_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09750 KV808271.1 Protein Homology CDS 1815 2183 . - 0 ID=cds-OFJ88017.1;Parent=gene-HMPREF2844_09750;Dbxref=NCBI_GP:OFJ88017.1;Name=OFJ88017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003712555.1;locus_tag=HMPREF2844_09750;product=transposase;protein_id=OFJ88017.1;transl_table=11 KV808271.1 Genbank gene 3189 6032 . + . ID=gene-HMPREF2844_09755;Name=HMPREF2844_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09755 KV808271.1 Protein Homology CDS 3189 6032 . + 0 ID=cds-OFJ88018.1;Parent=gene-HMPREF2844_09755;Dbxref=NCBI_GP:OFJ88018.1;Name=OFJ88018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763958.1;locus_tag=HMPREF2844_09755;product=restriction endonuclease subunit R;protein_id=OFJ88018.1;transl_table=11 KV808271.1 Genbank gene 6020 7420 . + . ID=gene-HMPREF2844_09760;Name=HMPREF2844_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09760 KV808271.1 GeneMarkS+ CDS 6020 7420 . + 0 ID=cds-OFJ88019.1;Parent=gene-HMPREF2844_09760;Dbxref=NCBI_GP:OFJ88019.1;Name=OFJ88019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09760;product=hypothetical protein;protein_id=OFJ88019.1;transl_table=11 KV808271.1 Genbank gene 7439 8935 . + . ID=gene-HMPREF2844_09765;Name=HMPREF2844_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09765 KV808271.1 Protein Homology CDS 7439 8935 . + 0 ID=cds-OFJ88020.1;Parent=gene-HMPREF2844_09765;Dbxref=NCBI_GP:OFJ88020.1;Name=OFJ88020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778323.1;locus_tag=HMPREF2844_09765;product=DNA methyltransferase;protein_id=OFJ88020.1;transl_table=11 KV808271.1 Genbank gene 9264 9458 . + . ID=gene-HMPREF2844_09770;Name=HMPREF2844_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09770 KV808271.1 Protein Homology CDS 9264 9458 . + 0 ID=cds-OFJ88021.1;Parent=gene-HMPREF2844_09770;Dbxref=NCBI_GP:OFJ88021.1;Name=OFJ88021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746314.1;locus_tag=HMPREF2844_09770;product=hypothetical protein;protein_id=OFJ88021.1;transl_table=11 KV808271.1 Genbank gene 9471 9992 . + . ID=gene-HMPREF2844_09775;Name=HMPREF2844_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09775 KV808271.1 Protein Homology CDS 9471 9992 . + 0 ID=cds-OFJ88022.1;Parent=gene-HMPREF2844_09775;Dbxref=NCBI_GP:OFJ88022.1;Name=OFJ88022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016688074.1;locus_tag=HMPREF2844_09775;product=hypothetical protein;protein_id=OFJ88022.1;transl_table=11 KV808271.1 Genbank gene 10072 10374 . + . ID=gene-HMPREF2844_09780;Name=HMPREF2844_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09780 KV808271.1 Protein Homology CDS 10072 10374 . + 0 ID=cds-OFJ88023.1;Parent=gene-HMPREF2844_09780;Dbxref=NCBI_GP:OFJ88023.1;Name=OFJ88023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003821656.1;locus_tag=HMPREF2844_09780;product=transcriptional regulator;protein_id=OFJ88023.1;transl_table=11 KV808271.1 Genbank gene 11079 12332 . - . ID=gene-HMPREF2844_09785;Name=HMPREF2844_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09785 KV808271.1 Protein Homology CDS 11079 12332 . - 0 ID=cds-OFJ88008.1;Parent=gene-HMPREF2844_09785;Dbxref=NCBI_GP:OFJ88008.1;Name=OFJ88008.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679373.1;locus_tag=HMPREF2844_09785;product=glutamyl-tRNA reductase;protein_id=OFJ88008.1;transl_table=11 KV808271.1 Genbank gene 12482 13273 . - . ID=gene-HMPREF2844_09790;Name=HMPREF2844_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09790 KV808271.1 Protein Homology CDS 12482 13273 . - 0 ID=cds-OFJ88009.1;Parent=gene-HMPREF2844_09790;Dbxref=NCBI_GP:OFJ88009.1;Name=OFJ88009.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271718.1;locus_tag=HMPREF2844_09790;product=spermidine synthase;protein_id=OFJ88009.1;transl_table=11 KV808271.1 Genbank gene 13517 13592 . + . ID=gene-HMPREF2844_09795;Name=HMPREF2844_09795;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_09795 KV808271.1 tRNAscan-SE tRNA 13517 13592 . + . ID=rna-HMPREF2844_09795;Parent=gene-HMPREF2844_09795;anticodon=(pos:13550..13552);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09795;product=tRNA-Thr KV808271.1 tRNAscan-SE exon 13517 13592 . + . ID=exon-HMPREF2844_09795-1;Parent=rna-HMPREF2844_09795;anticodon=(pos:13550..13552);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09795;product=tRNA-Thr KV808271.1 Genbank gene 13629 13704 . + . ID=gene-HMPREF2844_09800;Name=HMPREF2844_09800;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_09800 KV808271.1 tRNAscan-SE tRNA 13629 13704 . + . ID=rna-HMPREF2844_09800;Parent=gene-HMPREF2844_09800;anticodon=(pos:13662..13664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09800;product=tRNA-Thr KV808271.1 tRNAscan-SE exon 13629 13704 . + . ID=exon-HMPREF2844_09800-1;Parent=rna-HMPREF2844_09800;anticodon=(pos:13662..13664);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09800;product=tRNA-Thr KV808271.1 Genbank gene 13851 14639 . + . ID=gene-HMPREF2844_09805;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=HMPREF2844_09805 KV808271.1 Protein Homology CDS 13851 14639 . + 0 ID=cds-OFJ88010.1;Parent=gene-HMPREF2844_09805;Dbxref=NCBI_GP:OFJ88010.1;Name=OFJ88010.1;Note=catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate;gbkey=CDS;gene=panB;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JZW6.1;locus_tag=HMPREF2844_09805;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=OFJ88010.1;transl_table=11 KV808271.1 Genbank gene 14811 15647 . + . ID=gene-HMPREF2844_09810;Name=HMPREF2844_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09810 KV808271.1 Protein Homology CDS 14811 15647 . + 0 ID=cds-OFJ88011.1;Parent=gene-HMPREF2844_09810;Dbxref=NCBI_GP:OFJ88011.1;Name=OFJ88011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747200.1;locus_tag=HMPREF2844_09810;product=pantoate--beta-alanine ligase;protein_id=OFJ88011.1;transl_table=11 KV808271.1 Genbank gene 15973 16464 . - . ID=gene-HMPREF2844_09815;Name=HMPREF2844_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09815 KV808271.1 Protein Homology CDS 15973 16464 . - 0 ID=cds-OFJ87937.1;Parent=gene-HMPREF2844_09815;Dbxref=NCBI_GP:OFJ87937.1;Name=OFJ87937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683280.1;locus_tag=HMPREF2844_09815;product=type IV pilin;protein_id=OFJ87937.1;transl_table=11 KV808271.1 Genbank gene 16482 17060 . - . ID=gene-HMPREF2844_09820;Name=HMPREF2844_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09820 KV808271.1 Protein Homology CDS 16482 17060 . - 0 ID=cds-OFJ87938.1;Parent=gene-HMPREF2844_09820;Dbxref=NCBI_GP:OFJ87938.1;Name=OFJ87938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683429.1;locus_tag=HMPREF2844_09820;product=pilus assembly protein PilX;protein_id=OFJ87938.1;transl_table=11 KV808271.1 Genbank gene 17039 18013 . - . ID=gene-HMPREF2844_09825;Name=HMPREF2844_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09825 KV808271.1 Protein Homology CDS 17039 18013 . - 0 ID=cds-OFJ87939.1;Parent=gene-HMPREF2844_09825;Dbxref=NCBI_GP:OFJ87939.1;Name=OFJ87939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003683284.1;locus_tag=HMPREF2844_09825;product=pilus assembly protein PilW;protein_id=OFJ87939.1;transl_table=11 KV808271.1 Genbank gene 18013 18588 . - . ID=gene-HMPREF2844_09830;Name=HMPREF2844_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09830 KV808271.1 Protein Homology CDS 18013 18588 . - 0 ID=cds-OFJ87940.1;Parent=gene-HMPREF2844_09830;Dbxref=NCBI_GP:OFJ87940.1;Name=OFJ87940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686418.1;locus_tag=HMPREF2844_09830;product=type IV pilus modification protein PilV;protein_id=OFJ87940.1;transl_table=11 KV808271.1 Genbank gene 18703 19395 . - . ID=gene-HMPREF2844_09835;Name=HMPREF2844_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09835 KV808271.1 Protein Homology CDS 18703 19395 . - 0 ID=cds-OFJ87941.1;Parent=gene-HMPREF2844_09835;Dbxref=NCBI_GP:OFJ87941.1;Name=OFJ87941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686417.1;locus_tag=HMPREF2844_09835;product=type II secretion system protein GspH;protein_id=OFJ87941.1;transl_table=11 KV808271.1 Genbank gene 19553 20959 . - . ID=gene-HMPREF2844_09840;Name=HMPREF2844_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09840 KV808271.1 Protein Homology CDS 19553 20959 . - 0 ID=cds-OFJ87942.1;Parent=gene-HMPREF2844_09840;Dbxref=NCBI_GP:OFJ87942.1;Name=OFJ87942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004283371.1;locus_tag=HMPREF2844_09840;product=replicative DNA helicase;protein_id=OFJ87942.1;transl_table=11 KV808271.1 Genbank gene 21127 21708 . + . ID=gene-HMPREF2844_09845;Name=HMPREF2844_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09845 KV808271.1 Protein Homology CDS 21127 21708 . + 0 ID=cds-OFJ87943.1;Parent=gene-HMPREF2844_09845;Dbxref=NCBI_GP:OFJ87943.1;Name=OFJ87943.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019957326.1;locus_tag=HMPREF2844_09845;product=superoxide dismutase;protein_id=OFJ87943.1;transl_table=11 ##sequence-region KV808272.1 1 38103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808272.1 Genbank region 1 38103 . + . ID=KV808272.1:1..38103;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808272.1 Genbank pseudogene 1 161 . + . ID=gene-HMPREF2844_09850;Name=HMPREF2844_09850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_09850;pseudo=true KV808272.1 Protein Homology CDS 1 161 . + 2 ID=cds-HMPREF2844_09850;Parent=gene-HMPREF2844_09850;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312445.1;locus_tag=HMPREF2844_09850;product=transposase;pseudo=true;transl_table=11 KV808272.1 Genbank gene 285 578 . - . ID=gene-HMPREF2844_09855;Name=HMPREF2844_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09855 KV808272.1 Protein Homology CDS 285 578 . - 0 ID=cds-OFJ87836.1;Parent=gene-HMPREF2844_09855;Dbxref=NCBI_GP:OFJ87836.1;Name=OFJ87836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687298.1;locus_tag=HMPREF2844_09855;product=hypothetical protein;protein_id=OFJ87836.1;transl_table=11 KV808272.1 Genbank gene 608 2689 . + . ID=gene-HMPREF2844_09860;Name=HMPREF2844_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09860 KV808272.1 Protein Homology CDS 608 2689 . + 0 ID=cds-OFJ87837.1;Parent=gene-HMPREF2844_09860;Dbxref=NCBI_GP:OFJ87837.1;Name=OFJ87837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713845.1;locus_tag=HMPREF2844_09860;product=carbon starvation protein A;protein_id=OFJ87837.1;transl_table=11 KV808272.1 Genbank gene 2679 2873 . + . ID=gene-HMPREF2844_09865;Name=HMPREF2844_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09865 KV808272.1 Protein Homology CDS 2679 2873 . + 0 ID=cds-OFJ87838.1;Parent=gene-HMPREF2844_09865;Dbxref=NCBI_GP:OFJ87838.1;Name=OFJ87838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002222250.1;locus_tag=HMPREF2844_09865;product=hypothetical protein;protein_id=OFJ87838.1;transl_table=11 KV808272.1 Genbank gene 2954 3853 . - . ID=gene-HMPREF2844_09870;Name=HMPREF2844_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09870 KV808272.1 Protein Homology CDS 2954 3853 . - 0 ID=cds-OFJ87859.1;Parent=gene-HMPREF2844_09870;Dbxref=NCBI_GP:OFJ87859.1;Name=OFJ87859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014580280.1;locus_tag=HMPREF2844_09870;product=ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=OFJ87859.1;transl_table=11 KV808272.1 Genbank gene 3992 4390 . - . ID=gene-HMPREF2844_09875;Name=HMPREF2844_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09875 KV808272.1 Protein Homology CDS 3992 4390 . - 0 ID=cds-OFJ87839.1;Parent=gene-HMPREF2844_09875;Dbxref=NCBI_GP:OFJ87839.1;Name=OFJ87839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745956.1;locus_tag=HMPREF2844_09875;product=cytochrome C;protein_id=OFJ87839.1;transl_table=11 KV808272.1 Genbank gene 4529 5539 . - . ID=gene-HMPREF2844_09880;Name=HMPREF2844_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09880 KV808272.1 Protein Homology CDS 4529 5539 . - 0 ID=cds-OFJ87840.1;Parent=gene-HMPREF2844_09880;Dbxref=NCBI_GP:OFJ87840.1;Name=OFJ87840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003745958.1;locus_tag=HMPREF2844_09880;product=ferrochelatase;protein_id=OFJ87840.1;transl_table=11 KV808272.1 Genbank gene 5649 6764 . - . ID=gene-HMPREF2844_09885;Name=HMPREF2844_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09885 KV808272.1 Protein Homology CDS 5649 6764 . - 0 ID=cds-OFJ87841.1;Parent=gene-HMPREF2844_09885;Dbxref=NCBI_GP:OFJ87841.1;Name=OFJ87841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010357167.1;locus_tag=HMPREF2844_09885;product=tRNA-guanine(34) transglycosylase;protein_id=OFJ87841.1;transl_table=11 KV808272.1 Genbank gene 7021 7097 . + . ID=gene-HMPREF2844_09890;Name=HMPREF2844_09890;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_09890 KV808272.1 tRNAscan-SE tRNA 7021 7097 . + . ID=rna-HMPREF2844_09890;Parent=gene-HMPREF2844_09890;anticodon=(pos:7055..7057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09890;product=tRNA-Val KV808272.1 tRNAscan-SE exon 7021 7097 . + . ID=exon-HMPREF2844_09890-1;Parent=rna-HMPREF2844_09890;anticodon=(pos:7055..7057);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_09890;product=tRNA-Val KV808272.1 Genbank gene 7152 9065 . + . ID=gene-HMPREF2844_09895;Name=HMPREF2844_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09895 KV808272.1 Protein Homology CDS 7152 9065 . + 0 ID=cds-OFJ87842.1;Parent=gene-HMPREF2844_09895;Dbxref=NCBI_GP:OFJ87842.1;Name=OFJ87842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312109.1;locus_tag=HMPREF2844_09895;product=threonine--tRNA ligase;protein_id=OFJ87842.1;transl_table=11 KV808272.1 Genbank gene 9200 9604 . + . ID=gene-HMPREF2844_09900;Name=HMPREF2844_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09900 KV808272.1 Protein Homology CDS 9200 9604 . + 0 ID=cds-OFJ87843.1;Parent=gene-HMPREF2844_09900;Dbxref=NCBI_GP:OFJ87843.1;Name=OFJ87843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002214107.1;locus_tag=HMPREF2844_09900;product=translation initiation factor IF-3;protein_id=OFJ87843.1;transl_table=11 KV808272.1 Genbank gene 9751 9948 . + . ID=gene-HMPREF2844_09905;Name=HMPREF2844_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09905 KV808272.1 Protein Homology CDS 9751 9948 . + 0 ID=cds-OFJ87844.1;Parent=gene-HMPREF2844_09905;Dbxref=NCBI_GP:OFJ87844.1;Name=OFJ87844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641005.1;locus_tag=HMPREF2844_09905;product=50S ribosomal protein L35;protein_id=OFJ87844.1;transl_table=11 KV808272.1 Genbank gene 9961 10320 . + . ID=gene-HMPREF2844_09910;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF2844_09910 KV808272.1 Protein Homology CDS 9961 10320 . + 0 ID=cds-OFJ87845.1;Parent=gene-HMPREF2844_09910;Dbxref=NCBI_GP:OFJ87845.1;Name=OFJ87845.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K093.1;locus_tag=HMPREF2844_09910;product=50S ribosomal protein L20;protein_id=OFJ87845.1;transl_table=11 KV808272.1 Genbank gene 10569 11558 . + . ID=gene-HMPREF2844_09915;Name=HMPREF2844_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09915 KV808272.1 Protein Homology CDS 10569 11558 . + 0 ID=cds-OFJ87846.1;Parent=gene-HMPREF2844_09915;Dbxref=NCBI_GP:OFJ87846.1;Name=OFJ87846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270264.1;locus_tag=HMPREF2844_09915;product=phenylalanine--tRNA ligase subunit alpha;protein_id=OFJ87846.1;transl_table=11 KV808272.1 Genbank gene 11742 12362 . + . ID=gene-HMPREF2844_09920;Name=HMPREF2844_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09920 KV808272.1 Protein Homology CDS 11742 12362 . + 0 ID=cds-OFJ87847.1;Parent=gene-HMPREF2844_09920;Dbxref=NCBI_GP:OFJ87847.1;Name=OFJ87847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270263.1;locus_tag=HMPREF2844_09920;product=FMN-dependent NADH-azoreductase;protein_id=OFJ87847.1;transl_table=11 KV808272.1 Genbank gene 12447 12854 . + . ID=gene-HMPREF2844_09925;Name=HMPREF2844_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09925 KV808272.1 Protein Homology CDS 12447 12854 . + 0 ID=cds-OFJ87848.1;Parent=gene-HMPREF2844_09925;Dbxref=NCBI_GP:OFJ87848.1;Name=OFJ87848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270262.1;locus_tag=HMPREF2844_09925;product=glyoxalase;protein_id=OFJ87848.1;transl_table=11 KV808272.1 Genbank gene 12933 13238 . + . ID=gene-HMPREF2844_09930;Name=HMPREF2844_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09930 KV808272.1 Protein Homology CDS 12933 13238 . + 0 ID=cds-OFJ87849.1;Parent=gene-HMPREF2844_09930;Dbxref=NCBI_GP:OFJ87849.1;Name=OFJ87849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779235.1;locus_tag=HMPREF2844_09930;product=hypothetical protein;protein_id=OFJ87849.1;transl_table=11 KV808272.1 Genbank gene 13375 15738 . + . ID=gene-HMPREF2844_09935;Name=HMPREF2844_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09935 KV808272.1 Protein Homology CDS 13375 15738 . + 0 ID=cds-OFJ87850.1;Parent=gene-HMPREF2844_09935;Dbxref=NCBI_GP:OFJ87850.1;Name=OFJ87850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5F9T6.1;locus_tag=HMPREF2844_09935;product=phenylalanine--tRNA ligase subunit beta;protein_id=OFJ87850.1;transl_table=11 KV808272.1 Genbank gene 15812 16114 . + . ID=gene-HMPREF2844_09940;Name=HMPREF2844_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09940 KV808272.1 Protein Homology CDS 15812 16114 . + 0 ID=cds-OFJ87851.1;Parent=gene-HMPREF2844_09940;Dbxref=NCBI_GP:OFJ87851.1;Name=OFJ87851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002641098.1;locus_tag=HMPREF2844_09940;product=integration host factor subunit alpha;protein_id=OFJ87851.1;transl_table=11 KV808272.1 Genbank gene 16098 16415 . + . ID=gene-HMPREF2844_09945;Name=HMPREF2844_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09945 KV808272.1 Protein Homology CDS 16098 16415 . + 0 ID=cds-OFJ87852.1;Parent=gene-HMPREF2844_09945;Dbxref=NCBI_GP:OFJ87852.1;Name=OFJ87852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270259.1;locus_tag=HMPREF2844_09945;product=hypothetical protein;protein_id=OFJ87852.1;transl_table=11 KV808272.1 Genbank gene 16765 17502 . + . ID=gene-HMPREF2844_09950;Name=HMPREF2844_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09950 KV808272.1 Protein Homology CDS 16765 17502 . + 0 ID=cds-OFJ87853.1;Parent=gene-HMPREF2844_09950;Dbxref=NCBI_GP:OFJ87853.1;Name=OFJ87853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519393.1;locus_tag=HMPREF2844_09950;product=hypothetical protein;protein_id=OFJ87853.1;transl_table=11 KV808272.1 Genbank gene 17654 17929 . + . ID=gene-HMPREF2844_09955;Name=HMPREF2844_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09955 KV808272.1 Protein Homology CDS 17654 17929 . + 0 ID=cds-OFJ87854.1;Parent=gene-HMPREF2844_09955;Dbxref=NCBI_GP:OFJ87854.1;Name=OFJ87854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271952.1;locus_tag=HMPREF2844_09955;product=50S ribosomal protein L31;protein_id=OFJ87854.1;transl_table=11 KV808272.1 Genbank gene 17929 18054 . + . ID=gene-HMPREF2844_09960;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF2844_09960 KV808272.1 Protein Homology CDS 17929 18054 . + 0 ID=cds-OFJ87855.1;Parent=gene-HMPREF2844_09960;Dbxref=NCBI_GP:OFJ87855.1;Name=OFJ87855.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:SwissProt:A9M4E0.1;locus_tag=HMPREF2844_09960;product=50S ribosomal protein L36;protein_id=OFJ87855.1;transl_table=11 KV808272.1 Genbank gene 18276 18740 . + . ID=gene-HMPREF2844_09965;Name=HMPREF2844_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09965 KV808272.1 Protein Homology CDS 18276 18740 . + 0 ID=cds-OFJ87856.1;Parent=gene-HMPREF2844_09965;Dbxref=NCBI_GP:OFJ87856.1;Name=OFJ87856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744243.1;locus_tag=HMPREF2844_09965;product=hypothetical protein;protein_id=OFJ87856.1;transl_table=11 KV808272.1 Genbank gene 18934 20688 . + . ID=gene-HMPREF2844_09970;Name=HMPREF2844_09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09970 KV808272.1 Protein Homology CDS 18934 20688 . + 0 ID=cds-OFJ87857.1;Parent=gene-HMPREF2844_09970;Dbxref=NCBI_GP:OFJ87857.1;Name=OFJ87857.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311651.1;locus_tag=HMPREF2844_09970;product=sulfite reductase subunit beta;protein_id=OFJ87857.1;transl_table=11 KV808272.1 Genbank gene 20705 20950 . + . ID=gene-HMPREF2844_09975;Name=HMPREF2844_09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09975 KV808272.1 GeneMarkS+ CDS 20705 20950 . + 0 ID=cds-OFJ87858.1;Parent=gene-HMPREF2844_09975;Dbxref=NCBI_GP:OFJ87858.1;Name=OFJ87858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_09975;product=hypothetical protein;protein_id=OFJ87858.1;transl_table=11 KV808272.1 Genbank gene 21435 22949 . - . ID=gene-HMPREF2844_09980;Name=HMPREF2844_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09980 KV808272.1 Protein Homology CDS 21435 22949 . - 0 ID=cds-OFJ87780.1;Parent=gene-HMPREF2844_09980;Dbxref=NCBI_GP:OFJ87780.1;Name=OFJ87780.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680923.1;locus_tag=HMPREF2844_09980;product=spermidine synthase;protein_id=OFJ87780.1;transl_table=11 KV808272.1 Genbank gene 23163 24707 . + . ID=gene-HMPREF2844_09985;Name=HMPREF2844_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09985 KV808272.1 Protein Homology CDS 23163 24707 . + 0 ID=cds-OFJ87781.1;Parent=gene-HMPREF2844_09985;Dbxref=NCBI_GP:OFJ87781.1;Name=OFJ87781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251190.1;locus_tag=HMPREF2844_09985;product=amidophosphoribosyltransferase;protein_id=OFJ87781.1;transl_table=11 KV808272.1 Genbank gene 24976 25626 . + . ID=gene-HMPREF2844_09990;Name=HMPREF2844_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09990 KV808272.1 Protein Homology CDS 24976 25626 . + 0 ID=cds-OFJ87782.1;Parent=gene-HMPREF2844_09990;Dbxref=NCBI_GP:OFJ87782.1;Name=OFJ87782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270252.1;locus_tag=HMPREF2844_09990;product=hypothetical protein;protein_id=OFJ87782.1;transl_table=11 KV808272.1 Genbank gene 25815 28040 . + . ID=gene-HMPREF2844_09995;Name=HMPREF2844_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_09995 KV808272.1 Protein Homology CDS 25815 28040 . + 0 ID=cds-OFJ87783.1;Parent=gene-HMPREF2844_09995;Dbxref=NCBI_GP:OFJ87783.1;Name=OFJ87783.1;Note=NADP-specific%2C catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311637.1;locus_tag=HMPREF2844_09995;product=isocitrate dehydrogenase;protein_id=OFJ87783.1;transl_table=11 KV808272.1 Genbank gene 28382 29722 . + . ID=gene-HMPREF2844_10000;Name=HMPREF2844_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10000 KV808272.1 Protein Homology CDS 28382 29722 . + 0 ID=cds-OFJ87784.1;Parent=gene-HMPREF2844_10000;Dbxref=NCBI_GP:OFJ87784.1;Name=OFJ87784.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687262.1;locus_tag=HMPREF2844_10000;product=hypothetical protein;protein_id=OFJ87784.1;transl_table=11 KV808272.1 Genbank gene 29795 31132 . + . ID=gene-HMPREF2844_10005;Name=HMPREF2844_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10005 KV808272.1 Protein Homology CDS 29795 31132 . + 0 ID=cds-OFJ87785.1;Parent=gene-HMPREF2844_10005;Dbxref=NCBI_GP:OFJ87785.1;Name=OFJ87785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003691594.1;locus_tag=HMPREF2844_10005;product=GTP-binding protein;protein_id=OFJ87785.1;transl_table=11 KV808272.1 Genbank gene 31377 32636 . - . ID=gene-HMPREF2844_10010;Name=HMPREF2844_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10010 KV808272.1 Protein Homology CDS 31377 32636 . - 0 ID=cds-OFJ87786.1;Parent=gene-HMPREF2844_10010;Dbxref=NCBI_GP:OFJ87786.1;Name=OFJ87786.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744261.1;locus_tag=HMPREF2844_10010;product=D-amino acid dehydrogenase small subunit;protein_id=OFJ87786.1;transl_table=11 KV808272.1 Genbank gene 32746 33234 . + . ID=gene-HMPREF2844_10015;Name=HMPREF2844_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10015 KV808272.1 Protein Homology CDS 32746 33234 . + 0 ID=cds-OFJ87787.1;Parent=gene-HMPREF2844_10015;Dbxref=NCBI_GP:OFJ87787.1;Name=OFJ87787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003268929.1;locus_tag=HMPREF2844_10015;product=AsnC family transcriptional regulator;protein_id=OFJ87787.1;transl_table=11 KV808272.1 Genbank gene 33647 34078 . - . ID=gene-HMPREF2844_10020;Name=HMPREF2844_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10020 KV808272.1 Protein Homology CDS 33647 34078 . - 0 ID=cds-OFJ87788.1;Parent=gene-HMPREF2844_10020;Dbxref=NCBI_GP:OFJ87788.1;Name=OFJ87788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744263.1;locus_tag=HMPREF2844_10020;product=N utilization substance protein B;protein_id=OFJ87788.1;transl_table=11 KV808272.1 Genbank gene 34223 34702 . - . ID=gene-HMPREF2844_10025;Name=HMPREF2844_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10025 KV808272.1 Protein Homology CDS 34223 34702 . - 0 ID=cds-OFJ87789.1;Parent=gene-HMPREF2844_10025;Dbxref=NCBI_GP:OFJ87789.1;Name=OFJ87789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311397.1;locus_tag=HMPREF2844_10025;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=OFJ87789.1;transl_table=11 KV808272.1 Genbank gene 34778 35101 . - . ID=gene-HMPREF2844_10030;Name=HMPREF2844_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10030 KV808272.1 Protein Homology CDS 34778 35101 . - 0 ID=cds-OFJ87793.1;Parent=gene-HMPREF2844_10030;Dbxref=NCBI_GP:OFJ87793.1;Name=OFJ87793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002231998.1;locus_tag=HMPREF2844_10030;product=hypothetical protein;protein_id=OFJ87793.1;transl_table=11 KV808272.1 Genbank gene 35373 36092 . + . ID=gene-HMPREF2844_10035;Name=HMPREF2844_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10035 KV808272.1 Protein Homology CDS 35373 36092 . + 0 ID=cds-OFJ87790.1;Parent=gene-HMPREF2844_10035;Dbxref=NCBI_GP:OFJ87790.1;Name=OFJ87790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221273.1;locus_tag=HMPREF2844_10035;product=ribonuclease III;protein_id=OFJ87790.1;transl_table=11 KV808272.1 Genbank gene 36160 37083 . + . ID=gene-HMPREF2844_10040;Name=HMPREF2844_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10040 KV808272.1 Protein Homology CDS 36160 37083 . + 0 ID=cds-OFJ87791.1;Parent=gene-HMPREF2844_10040;Dbxref=NCBI_GP:OFJ87791.1;Name=OFJ87791.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765450.1;locus_tag=HMPREF2844_10040;product=GTPase Era;protein_id=OFJ87791.1;transl_table=11 KV808272.1 Genbank gene 37130 38047 . + . ID=gene-HMPREF2844_10045;Name=HMPREF2844_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10045 KV808272.1 Protein Homology CDS 37130 38047 . + 0 ID=cds-OFJ87792.1;Parent=gene-HMPREF2844_10045;Dbxref=NCBI_GP:OFJ87792.1;Name=OFJ87792.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778475.1;locus_tag=HMPREF2844_10045;product=homoserine kinase;protein_id=OFJ87792.1;transl_table=11 ##sequence-region KV808273.1 1 811 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808273.1 Genbank region 1 811 . + . ID=KV808273.1:1..811;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808273.1 Genbank pseudogene 1 811 . - . ID=gene-HMPREF2844_10050;Name=HMPREF2844_10050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10050;pseudo=true KV808273.1 Protein Homology CDS 1 811 . - 0 ID=cds-HMPREF2844_10050;Parent=gene-HMPREF2844_10050;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003681582.1;locus_tag=HMPREF2844_10050;product=sugar-binding protein;pseudo=true;transl_table=11 ##sequence-region KV808274.1 1 55864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808274.1 Genbank region 1 55864 . + . ID=KV808274.1:1..55864;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808274.1 Genbank gene 90 731 . - . ID=gene-HMPREF2844_10055;Name=HMPREF2844_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10055 KV808274.1 Protein Homology CDS 90 731 . - 0 ID=cds-OFJ87725.1;Parent=gene-HMPREF2844_10055;Dbxref=NCBI_GP:OFJ87725.1;Name=OFJ87725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JU81.1;locus_tag=HMPREF2844_10055;product=3-isopropylmalate dehydratase small subunit;protein_id=OFJ87725.1;transl_table=11 KV808274.1 Genbank gene 808 945 . - . ID=gene-HMPREF2844_10060;Name=HMPREF2844_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10060 KV808274.1 Protein Homology CDS 808 945 . - 0 ID=cds-OFJ87726.1;Parent=gene-HMPREF2844_10060;Dbxref=NCBI_GP:OFJ87726.1;Name=OFJ87726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742168.1;locus_tag=HMPREF2844_10060;product=entericidin;protein_id=OFJ87726.1;transl_table=11 KV808274.1 Genbank gene 978 1115 . - . ID=gene-HMPREF2844_10065;Name=HMPREF2844_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10065 KV808274.1 Protein Homology CDS 978 1115 . - 0 ID=cds-OFJ87727.1;Parent=gene-HMPREF2844_10065;Dbxref=NCBI_GP:OFJ87727.1;Name=OFJ87727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742168.1;locus_tag=HMPREF2844_10065;product=entericidin;protein_id=OFJ87727.1;transl_table=11 KV808274.1 Genbank gene 1332 1553 . - . ID=gene-HMPREF2844_10070;Name=HMPREF2844_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10070 KV808274.1 Protein Homology CDS 1332 1553 . - 0 ID=cds-OFJ87728.1;Parent=gene-HMPREF2844_10070;Dbxref=NCBI_GP:OFJ87728.1;Name=OFJ87728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273351.1;locus_tag=HMPREF2844_10070;product=hypothetical protein;protein_id=OFJ87728.1;transl_table=11 KV808274.1 Genbank gene 1650 3059 . - . ID=gene-HMPREF2844_10075;Name=HMPREF2844_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10075 KV808274.1 Protein Homology CDS 1650 3059 . - 0 ID=cds-OFJ87729.1;Parent=gene-HMPREF2844_10075;Dbxref=NCBI_GP:OFJ87729.1;Name=OFJ87729.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448951.1;locus_tag=HMPREF2844_10075;product=isopropylmalate isomerase;protein_id=OFJ87729.1;transl_table=11 KV808274.1 Genbank gene 3327 4679 . + . ID=gene-HMPREF2844_10080;Name=HMPREF2844_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10080 KV808274.1 Protein Homology CDS 3327 4679 . + 0 ID=cds-OFJ87730.1;Parent=gene-HMPREF2844_10080;Dbxref=NCBI_GP:OFJ87730.1;Name=OFJ87730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004464399.1;locus_tag=HMPREF2844_10080;product=glutamate--cysteine ligase;protein_id=OFJ87730.1;transl_table=11 KV808274.1 Genbank gene 4831 7056 . + . ID=gene-HMPREF2844_10085;Name=HMPREF2844_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10085 KV808274.1 Protein Homology CDS 4831 7056 . + 0 ID=cds-OFJ87731.1;Parent=gene-HMPREF2844_10085;Dbxref=NCBI_GP:OFJ87731.1;Name=OFJ87731.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311926.1;locus_tag=HMPREF2844_10085;product=competence protein ComA;protein_id=OFJ87731.1;transl_table=11 KV808274.1 Genbank gene 7566 8186 . - . ID=gene-HMPREF2844_10090;Name=HMPREF2844_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10090 KV808274.1 Protein Homology CDS 7566 8186 . - 0 ID=cds-OFJ87732.1;Parent=gene-HMPREF2844_10090;Dbxref=NCBI_GP:OFJ87732.1;Name=OFJ87732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520606.1;locus_tag=HMPREF2844_10090;product=ATP-dependent Clp protease proteolytic subunit;protein_id=OFJ87732.1;transl_table=11 KV808274.1 Genbank gene 8274 9584 . - . ID=gene-HMPREF2844_10095;Name=HMPREF2844_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10095 KV808274.1 Protein Homology CDS 8274 9584 . - 0 ID=cds-OFJ87733.1;Parent=gene-HMPREF2844_10095;Dbxref=NCBI_GP:OFJ87733.1;Name=OFJ87733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742150.1;locus_tag=HMPREF2844_10095;product=trigger factor;protein_id=OFJ87733.1;transl_table=11 KV808274.1 Genbank gene 9914 10597 . - . ID=gene-HMPREF2844_10100;Name=HMPREF2844_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10100 KV808274.1 Protein Homology CDS 9914 10597 . - 0 ID=cds-OFJ87734.1;Parent=gene-HMPREF2844_10100;Dbxref=NCBI_GP:OFJ87734.1;Name=OFJ87734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680550.1;locus_tag=HMPREF2844_10100;product=hypothetical protein;protein_id=OFJ87734.1;transl_table=11 KV808274.1 Genbank gene 10838 13222 . - . ID=gene-HMPREF2844_10105;Name=HMPREF2844_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10105 KV808274.1 Protein Homology CDS 10838 13222 . - 0 ID=cds-OFJ87735.1;Parent=gene-HMPREF2844_10105;Dbxref=NCBI_GP:OFJ87735.1;Name=OFJ87735.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753989.1;locus_tag=HMPREF2844_10105;product=phosphoenolpyruvate synthase;protein_id=OFJ87735.1;transl_table=11 KV808274.1 Genbank gene 13641 14462 . + . ID=gene-HMPREF2844_10110;Name=HMPREF2844_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10110 KV808274.1 Protein Homology CDS 13641 14462 . + 0 ID=cds-OFJ87736.1;Parent=gene-HMPREF2844_10110;Dbxref=NCBI_GP:OFJ87736.1;Name=OFJ87736.1;Note=mediates the activation of PEP synthetase by an inorganic phosphate pyrophosphorylation and inactivates PEP synthetase by ADP-dependent phosphorylation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVI4.1;locus_tag=HMPREF2844_10110;product=phosphoenolpyruvate synthase regulatory protein;protein_id=OFJ87736.1;transl_table=11 KV808274.1 Genbank gene 14683 15522 . + . ID=gene-HMPREF2844_10115;Name=HMPREF2844_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10115 KV808274.1 Protein Homology CDS 14683 15522 . + 0 ID=cds-OFJ87737.1;Parent=gene-HMPREF2844_10115;Dbxref=NCBI_GP:OFJ87737.1;Name=OFJ87737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765408.1;locus_tag=HMPREF2844_10115;product=hypothetical protein;protein_id=OFJ87737.1;transl_table=11 KV808274.1 Genbank gene 15606 16454 . - . ID=gene-HMPREF2844_10120;Name=HMPREF2844_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10120 KV808274.1 Protein Homology CDS 15606 16454 . - 0 ID=cds-OFJ87738.1;Parent=gene-HMPREF2844_10120;Dbxref=NCBI_GP:OFJ87738.1;Name=OFJ87738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271567.1;locus_tag=HMPREF2844_10120;product=S-formylglutathione hydrolase;protein_id=OFJ87738.1;transl_table=11 KV808274.1 Genbank gene 16904 18616 . + . ID=gene-HMPREF2844_10125;Name=HMPREF2844_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10125 KV808274.1 Protein Homology CDS 16904 18616 . + 0 ID=cds-OFJ87739.1;Parent=gene-HMPREF2844_10125;Dbxref=NCBI_GP:OFJ87739.1;Name=OFJ87739.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687726.1;locus_tag=HMPREF2844_10125;product=proline--tRNA ligase;protein_id=OFJ87739.1;transl_table=11 KV808274.1 Genbank gene 19043 19483 . - . ID=gene-HMPREF2844_10130;Name=HMPREF2844_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10130 KV808274.1 Protein Homology CDS 19043 19483 . - 0 ID=cds-OFJ87682.1;Parent=gene-HMPREF2844_10130;Dbxref=NCBI_GP:OFJ87682.1;Name=OFJ87682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765348.1;locus_tag=HMPREF2844_10130;product=Sterol-binding domain protein;protein_id=OFJ87682.1;transl_table=11 KV808274.1 Genbank gene 19470 20387 . - . ID=gene-HMPREF2844_10135;Name=HMPREF2844_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10135 KV808274.1 Protein Homology CDS 19470 20387 . - 0 ID=cds-OFJ87683.1;Parent=gene-HMPREF2844_10135;Dbxref=NCBI_GP:OFJ87683.1;Name=OFJ87683.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784547.1;locus_tag=HMPREF2844_10135;product=U32 family peptidase;protein_id=OFJ87683.1;transl_table=11 KV808274.1 Genbank gene 20400 21407 . - . ID=gene-HMPREF2844_10140;Name=HMPREF2844_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10140 KV808274.1 Protein Homology CDS 20400 21407 . - 0 ID=cds-OFJ87684.1;Parent=gene-HMPREF2844_10140;Dbxref=NCBI_GP:OFJ87684.1;Name=OFJ87684.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269965.1;locus_tag=HMPREF2844_10140;product=protease;protein_id=OFJ87684.1;transl_table=11 KV808274.1 Genbank gene 21690 22295 . - . ID=gene-HMPREF2844_10145;Name=HMPREF2844_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10145 KV808274.1 Protein Homology CDS 21690 22295 . - 0 ID=cds-OFJ87685.1;Parent=gene-HMPREF2844_10145;Dbxref=NCBI_GP:OFJ87685.1;Name=OFJ87685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269966.1;locus_tag=HMPREF2844_10145;product=methyltransferase type 11;protein_id=OFJ87685.1;transl_table=11 KV808274.1 Genbank gene 22474 23322 . - . ID=gene-HMPREF2844_10150;Name=HMPREF2844_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10150 KV808274.1 Protein Homology CDS 22474 23322 . - 0 ID=cds-OFJ87686.1;Parent=gene-HMPREF2844_10150;Dbxref=NCBI_GP:OFJ87686.1;Name=OFJ87686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768002.1;locus_tag=HMPREF2844_10150;product=CAAX protease;protein_id=OFJ87686.1;transl_table=11 KV808274.1 Genbank gene 23553 23963 . - . ID=gene-HMPREF2844_10155;Name=HMPREF2844_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10155 KV808274.1 Protein Homology CDS 23553 23963 . - 0 ID=cds-OFJ87698.1;Parent=gene-HMPREF2844_10155;Dbxref=NCBI_GP:OFJ87698.1;Name=OFJ87698.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005404256.1;locus_tag=HMPREF2844_10155;product=hypothetical protein;protein_id=OFJ87698.1;transl_table=11 KV808274.1 Genbank gene 24139 25221 . - . ID=gene-HMPREF2844_10160;Name=HMPREF2844_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10160 KV808274.1 GeneMarkS+ CDS 24139 25221 . - 0 ID=cds-OFJ87687.1;Parent=gene-HMPREF2844_10160;Dbxref=NCBI_GP:OFJ87687.1;Name=OFJ87687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10160;product=hypothetical protein;protein_id=OFJ87687.1;transl_table=11 KV808274.1 Genbank gene 25571 28465 . - . ID=gene-HMPREF2844_10165;Name=HMPREF2844_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10165 KV808274.1 Protein Homology CDS 25571 28465 . - 0 ID=cds-OFJ87688.1;Parent=gene-HMPREF2844_10165;Dbxref=NCBI_GP:OFJ87688.1;Name=OFJ87688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746382.1;locus_tag=HMPREF2844_10165;product=alanine--tRNA ligase;protein_id=OFJ87688.1;transl_table=11 KV808274.1 Genbank gene 28679 29824 . + . ID=gene-HMPREF2844_10170;Name=HMPREF2844_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10170 KV808274.1 Protein Homology CDS 28679 29824 . + 0 ID=cds-OFJ87689.1;Parent=gene-HMPREF2844_10170;Dbxref=NCBI_GP:OFJ87689.1;Name=OFJ87689.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678024.1;locus_tag=HMPREF2844_10170;product=polyamine ABC transporter substrate-binding protein;protein_id=OFJ87689.1;transl_table=11 KV808274.1 Genbank gene 29897 31420 . - . ID=gene-HMPREF2844_10175;Name=HMPREF2844_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10175 KV808274.1 Protein Homology CDS 29897 31420 . - 0 ID=cds-OFJ87690.1;Parent=gene-HMPREF2844_10175;Dbxref=NCBI_GP:OFJ87690.1;Name=OFJ87690.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765285.1;locus_tag=HMPREF2844_10175;product=hypothetical protein;protein_id=OFJ87690.1;transl_table=11 KV808274.1 Genbank gene 31567 32571 . - . ID=gene-HMPREF2844_10180;Name=HMPREF2844_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10180 KV808274.1 Protein Homology CDS 31567 32571 . - 0 ID=cds-OFJ87691.1;Parent=gene-HMPREF2844_10180;Dbxref=NCBI_GP:OFJ87691.1;Name=OFJ87691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311360.1;locus_tag=HMPREF2844_10180;product=adenosine deaminase;protein_id=OFJ87691.1;transl_table=11 KV808274.1 Genbank gene 32589 33128 . - . ID=gene-HMPREF2844_10185;Name=HMPREF2844_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10185 KV808274.1 Protein Homology CDS 32589 33128 . - 0 ID=cds-OFJ87692.1;Parent=gene-HMPREF2844_10185;Dbxref=NCBI_GP:OFJ87692.1;Name=OFJ87692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742108.1;locus_tag=HMPREF2844_10185;product=hypothetical protein;protein_id=OFJ87692.1;transl_table=11 KV808274.1 Genbank gene 33311 34321 . - . ID=gene-HMPREF2844_10190;Name=HMPREF2844_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10190 KV808274.1 Protein Homology CDS 33311 34321 . - 0 ID=cds-OFJ87693.1;Parent=gene-HMPREF2844_10190;Dbxref=NCBI_GP:OFJ87693.1;Name=OFJ87693.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520609.1;locus_tag=HMPREF2844_10190;product=tryptophan--tRNA ligase;protein_id=OFJ87693.1;transl_table=11 KV808274.1 Genbank gene 34581 37154 . + . ID=gene-HMPREF2844_10195;Name=HMPREF2844_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10195 KV808274.1 Protein Homology CDS 34581 37154 . + 0 ID=cds-OFJ87694.1;Parent=gene-HMPREF2844_10195;Dbxref=NCBI_GP:OFJ87694.1;Name=OFJ87694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003766015.1;locus_tag=HMPREF2844_10195;product=ATP-dependent chaperone ClpB;protein_id=OFJ87694.1;transl_table=11 KV808274.1 Genbank gene 37269 38177 . - . ID=gene-HMPREF2844_10200;Name=HMPREF2844_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10200 KV808274.1 Protein Homology CDS 37269 38177 . - 0 ID=cds-OFJ87695.1;Parent=gene-HMPREF2844_10200;Dbxref=NCBI_GP:OFJ87695.1;Name=OFJ87695.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449228.1;locus_tag=HMPREF2844_10200;product=peroxidase;protein_id=OFJ87695.1;transl_table=11 KV808274.1 Genbank gene 38311 39408 . + . ID=gene-HMPREF2844_10205;Name=HMPREF2844_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10205 KV808274.1 Protein Homology CDS 38311 39408 . + 0 ID=cds-OFJ87696.1;Parent=gene-HMPREF2844_10205;Dbxref=NCBI_GP:OFJ87696.1;Name=OFJ87696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742103.1;locus_tag=HMPREF2844_10205;product=metallophosphoesterase;protein_id=OFJ87696.1;transl_table=11 KV808274.1 Genbank gene 39600 40196 . + . ID=gene-HMPREF2844_10210;Name=HMPREF2844_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10210 KV808274.1 Protein Homology CDS 39600 40196 . + 0 ID=cds-OFJ87697.1;Parent=gene-HMPREF2844_10210;Dbxref=NCBI_GP:OFJ87697.1;Name=OFJ87697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269977.1;locus_tag=HMPREF2844_10210;product=hypothetical protein;protein_id=OFJ87697.1;transl_table=11 KV808274.1 Genbank gene 40834 41688 . - . ID=gene-HMPREF2844_10215;Name=HMPREF2844_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10215 KV808274.1 Protein Homology CDS 40834 41688 . - 0 ID=cds-OFJ87670.1;Parent=gene-HMPREF2844_10215;Dbxref=NCBI_GP:OFJ87670.1;Name=OFJ87670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269979.1;locus_tag=HMPREF2844_10215;product=prolipoprotein diacylglyceryl transferase;protein_id=OFJ87670.1;transl_table=11 KV808274.1 Genbank gene 41801 42931 . - . ID=gene-HMPREF2844_10220;Name=HMPREF2844_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10220 KV808274.1 Protein Homology CDS 41801 42931 . - 0 ID=cds-OFJ87671.1;Parent=gene-HMPREF2844_10220;Dbxref=NCBI_GP:OFJ87671.1;Name=OFJ87671.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269980.1;locus_tag=HMPREF2844_10220;product=hypothetical protein;protein_id=OFJ87671.1;transl_table=11 KV808274.1 Genbank gene 43024 43209 . + . ID=gene-HMPREF2844_10225;Name=HMPREF2844_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10225 KV808274.1 Protein Homology CDS 43024 43209 . + 0 ID=cds-OFJ87672.1;Parent=gene-HMPREF2844_10225;Dbxref=NCBI_GP:OFJ87672.1;Name=OFJ87672.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742093.1;locus_tag=HMPREF2844_10225;product=pseudouridine synthase;protein_id=OFJ87672.1;transl_table=11 KV808274.1 Genbank gene 43240 44130 . + . ID=gene-HMPREF2844_10230;Name=HMPREF2844_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10230 KV808274.1 Protein Homology CDS 43240 44130 . + 0 ID=cds-OFJ87673.1;Parent=gene-HMPREF2844_10230;Dbxref=NCBI_GP:OFJ87673.1;Name=OFJ87673.1;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JUK2.1;locus_tag=HMPREF2844_10230;product=acetylglutamate kinase;protein_id=OFJ87673.1;transl_table=11 KV808274.1 Genbank gene 44280 45788 . - . ID=gene-HMPREF2844_10235;Name=HMPREF2844_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10235 KV808274.1 Protein Homology CDS 44280 45788 . - 0 ID=cds-OFJ87674.1;Parent=gene-HMPREF2844_10235;Dbxref=NCBI_GP:OFJ87674.1;Name=OFJ87674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679600.1;locus_tag=HMPREF2844_10235;product=exopolyphosphatase;protein_id=OFJ87674.1;transl_table=11 KV808274.1 Genbank gene 46040 46669 . + . ID=gene-HMPREF2844_10240;Name=HMPREF2844_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10240 KV808274.1 Protein Homology CDS 46040 46669 . + 0 ID=cds-OFJ87675.1;Parent=gene-HMPREF2844_10240;Dbxref=NCBI_GP:OFJ87675.1;Name=OFJ87675.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756649.1;locus_tag=HMPREF2844_10240;product=transglycosylase;protein_id=OFJ87675.1;transl_table=11 KV808274.1 Genbank gene 46800 48182 . + . ID=gene-HMPREF2844_10245;Name=HMPREF2844_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10245 KV808274.1 Protein Homology CDS 46800 48182 . + 0 ID=cds-OFJ87676.1;Parent=gene-HMPREF2844_10245;Dbxref=NCBI_GP:OFJ87676.1;Name=OFJ87676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010951164.1;locus_tag=HMPREF2844_10245;product=hypothetical protein;protein_id=OFJ87676.1;transl_table=11 KV808274.1 Genbank gene 48186 48701 . + . ID=gene-HMPREF2844_10250;Name=HMPREF2844_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10250 KV808274.1 Protein Homology CDS 48186 48701 . + 0 ID=cds-OFJ87677.1;Parent=gene-HMPREF2844_10250;Dbxref=NCBI_GP:OFJ87677.1;Name=OFJ87677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003710541.1;locus_tag=HMPREF2844_10250;product=single-stranded DNA-binding protein;protein_id=OFJ87677.1;transl_table=11 KV808274.1 Genbank gene 48851 50128 . + . ID=gene-HMPREF2844_10255;Name=HMPREF2844_10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10255 KV808274.1 Protein Homology CDS 48851 50128 . + 0 ID=cds-OFJ87678.1;Parent=gene-HMPREF2844_10255;Dbxref=NCBI_GP:OFJ87678.1;Name=OFJ87678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005564673.1;locus_tag=HMPREF2844_10255;product=integrase;protein_id=OFJ87678.1;transl_table=11 KV808274.1 Genbank gene 50316 51638 . + . ID=gene-HMPREF2844_10260;Name=HMPREF2844_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10260 KV808274.1 Protein Homology CDS 50316 51638 . + 0 ID=cds-OFJ87681.1;Parent=gene-HMPREF2844_10260;Dbxref=NCBI_GP:OFJ87681.1;Name=OFJ87681.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631038.1;locus_tag=HMPREF2844_10260;product=integrase;protein_id=OFJ87681.1;transl_table=11 KV808274.1 Genbank gene 51641 53683 . + . ID=gene-HMPREF2844_10265;Name=HMPREF2844_10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10265 KV808274.1 Protein Homology CDS 51641 53683 . + 0 ID=cds-OFJ87679.1;Parent=gene-HMPREF2844_10265;Dbxref=NCBI_GP:OFJ87679.1;Name=OFJ87679.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010907417.1;locus_tag=HMPREF2844_10265;product=integrase;protein_id=OFJ87679.1;transl_table=11 KV808274.1 Genbank gene 53685 54095 . + . ID=gene-HMPREF2844_10270;Name=HMPREF2844_10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10270 KV808274.1 Protein Homology CDS 53685 54095 . + 0 ID=cds-OFJ87680.1;Parent=gene-HMPREF2844_10270;Dbxref=NCBI_GP:OFJ87680.1;Name=OFJ87680.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756631.1;locus_tag=HMPREF2844_10270;product=hypothetical protein;protein_id=OFJ87680.1;transl_table=11 KV808274.1 Genbank pseudogene 54648 55028 . + . ID=gene-HMPREF2844_10275;Name=HMPREF2844_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10275;pseudo=true KV808274.1 Protein Homology CDS 54648 55028 . + 0 ID=cds-HMPREF2844_10275;Parent=gene-HMPREF2844_10275;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783694.1;locus_tag=HMPREF2844_10275;product=hypothetical protein;pseudo=true;transl_table=11 KV808274.1 Genbank pseudogene 55129 55335 . + . ID=gene-HMPREF2844_10280;Name=HMPREF2844_10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10280;pseudo=true KV808274.1 GeneMarkS+ CDS 55129 55335 . + 0 ID=cds-HMPREF2844_10280;Parent=gene-HMPREF2844_10280;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10280;product=hypothetical protein;pseudo=true;transl_table=11 KV808274.1 Genbank pseudogene 55604 55864 . + . ID=gene-HMPREF2844_10285;Name=HMPREF2844_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10285;pseudo=true KV808274.1 Protein Homology CDS 55604 55864 . + 2 ID=cds-HMPREF2844_10285;Parent=gene-HMPREF2844_10285;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003783694.1;locus_tag=HMPREF2844_10285;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808275.1 1 4284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808275.1 Genbank region 1 4284 . + . ID=KV808275.1:1..4284;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808275.1 Genbank gene 362 1243 . - . ID=gene-HMPREF2844_10290;Name=HMPREF2844_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10290 KV808275.1 Protein Homology CDS 362 1243 . - 0 ID=cds-OFJ87643.1;Parent=gene-HMPREF2844_10290;Dbxref=NCBI_GP:OFJ87643.1;Name=OFJ87643.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757985.1;locus_tag=HMPREF2844_10290;product=lauroyl acyltransferase;protein_id=OFJ87643.1;transl_table=11 KV808275.1 Genbank gene 1808 2089 . + . ID=gene-HMPREF2844_10295;Name=HMPREF2844_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10295 KV808275.1 Protein Homology CDS 1808 2089 . + 0 ID=cds-OFJ87644.1;Parent=gene-HMPREF2844_10295;Dbxref=NCBI_GP:OFJ87644.1;Name=OFJ87644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757194.1;locus_tag=HMPREF2844_10295;product=transcriptional regulator;protein_id=OFJ87644.1;transl_table=11 KV808275.1 Genbank gene 2279 3049 . + . ID=gene-HMPREF2844_10300;Name=HMPREF2844_10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10300 KV808275.1 Protein Homology CDS 2279 3049 . + 0 ID=cds-OFJ87645.1;Parent=gene-HMPREF2844_10300;Dbxref=NCBI_GP:OFJ87645.1;Name=OFJ87645.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448484.1;locus_tag=HMPREF2844_10300;product=exodeoxyribonuclease III;protein_id=OFJ87645.1;transl_table=11 KV808275.1 Genbank gene 3180 4007 . - . ID=gene-HMPREF2844_10305;Name=HMPREF2844_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10305 KV808275.1 Protein Homology CDS 3180 4007 . - 0 ID=cds-OFJ87646.1;Parent=gene-HMPREF2844_10305;Dbxref=NCBI_GP:OFJ87646.1;Name=OFJ87646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273551.1;locus_tag=HMPREF2844_10305;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=OFJ87646.1;transl_table=11 ##sequence-region KV808276.1 1 73628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808276.1 Genbank region 1 73628 . + . ID=KV808276.1:1..73628;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808276.1 Genbank gene 304 1053 . - . ID=gene-HMPREF2844_10310;Name=HMPREF2844_10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10310 KV808276.1 Protein Homology CDS 304 1053 . - 0 ID=cds-OFJ87571.1;Parent=gene-HMPREF2844_10310;Dbxref=NCBI_GP:OFJ87571.1;Name=OFJ87571.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685273.1;locus_tag=HMPREF2844_10310;product=acyltransferase;protein_id=OFJ87571.1;transl_table=11 KV808276.1 Genbank gene 1159 1908 . - . ID=gene-HMPREF2844_10315;Name=HMPREF2844_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10315 KV808276.1 Protein Homology CDS 1159 1908 . - 0 ID=cds-OFJ87572.1;Parent=gene-HMPREF2844_10315;Dbxref=NCBI_GP:OFJ87572.1;Name=OFJ87572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687677.1;locus_tag=HMPREF2844_10315;product=hemolysin;protein_id=OFJ87572.1;transl_table=11 KV808276.1 Genbank gene 2234 3565 . + . ID=gene-HMPREF2844_10320;Name=HMPREF2844_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10320 KV808276.1 Protein Homology CDS 2234 3565 . + 0 ID=cds-OFJ87573.1;Parent=gene-HMPREF2844_10320;Dbxref=NCBI_GP:OFJ87573.1;Name=OFJ87573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003777081.1;locus_tag=HMPREF2844_10320;product=adhesin;protein_id=OFJ87573.1;transl_table=11 KV808276.1 Genbank gene 3703 4842 . + . ID=gene-HMPREF2844_10325;Name=HMPREF2844_10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10325 KV808276.1 Protein Homology CDS 3703 4842 . + 0 ID=cds-OFJ87574.1;Parent=gene-HMPREF2844_10325;Dbxref=NCBI_GP:OFJ87574.1;Name=OFJ87574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004565666.1;locus_tag=HMPREF2844_10325;product=NADH-dependent flavin oxidoreductase;protein_id=OFJ87574.1;transl_table=11 KV808276.1 Genbank gene 5021 5800 . + . ID=gene-HMPREF2844_10330;Name=HMPREF2844_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10330 KV808276.1 Protein Homology CDS 5021 5800 . + 0 ID=cds-OFJ87575.1;Parent=gene-HMPREF2844_10330;Dbxref=NCBI_GP:OFJ87575.1;Name=OFJ87575.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271458.1;locus_tag=HMPREF2844_10330;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=OFJ87575.1;transl_table=11 KV808276.1 Genbank gene 5818 6546 . + . ID=gene-HMPREF2844_10335;Name=HMPREF2844_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10335 KV808276.1 Protein Homology CDS 5818 6546 . + 0 ID=cds-OFJ87576.1;Parent=gene-HMPREF2844_10335;Dbxref=NCBI_GP:OFJ87576.1;Name=OFJ87576.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173913.1;locus_tag=HMPREF2844_10335;product=polar amino acid ABC transporter ATP-binding protein;protein_id=OFJ87576.1;transl_table=11 KV808276.1 Genbank gene 6675 7034 . + . ID=gene-HMPREF2844_10340;Name=HMPREF2844_10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10340 KV808276.1 Protein Homology CDS 6675 7034 . + 0 ID=cds-OFJ87577.1;Parent=gene-HMPREF2844_10340;Dbxref=NCBI_GP:OFJ87577.1;Name=OFJ87577.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251194.1;locus_tag=HMPREF2844_10340;product=hypothetical protein;protein_id=OFJ87577.1;transl_table=11 KV808276.1 Genbank gene 7039 7473 . + . ID=gene-HMPREF2844_10345;Name=HMPREF2844_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10345 KV808276.1 Protein Homology CDS 7039 7473 . + 0 ID=cds-OFJ87578.1;Parent=gene-HMPREF2844_10345;Dbxref=NCBI_GP:OFJ87578.1;Name=OFJ87578.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761524.1;locus_tag=HMPREF2844_10345;product=transcriptional regulator;protein_id=OFJ87578.1;transl_table=11 KV808276.1 Genbank gene 7608 8882 . + . ID=gene-HMPREF2844_10350;Name=HMPREF2844_10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10350 KV808276.1 Protein Homology CDS 7608 8882 . + 0 ID=cds-OFJ87579.1;Parent=gene-HMPREF2844_10350;Dbxref=NCBI_GP:OFJ87579.1;Name=OFJ87579.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003753247.1;locus_tag=HMPREF2844_10350;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=OFJ87579.1;transl_table=11 KV808276.1 Genbank gene 8895 10130 . + . ID=gene-HMPREF2844_10355;Name=HMPREF2844_10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10355 KV808276.1 Protein Homology CDS 8895 10130 . + 0 ID=cds-OFJ87580.1;Parent=gene-HMPREF2844_10355;Dbxref=NCBI_GP:OFJ87580.1;Name=OFJ87580.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779857.1;locus_tag=HMPREF2844_10355;product=cell division protein FtsN;protein_id=OFJ87580.1;transl_table=11 KV808276.1 Genbank gene 10123 10641 . + . ID=gene-HMPREF2844_10360;Name=HMPREF2844_10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10360 KV808276.1 Protein Homology CDS 10123 10641 . + 0 ID=cds-OFJ87581.1;Parent=gene-HMPREF2844_10360;Dbxref=NCBI_GP:OFJ87581.1;Name=OFJ87581.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003747220.1;locus_tag=HMPREF2844_10360;product=colicin V production protein;protein_id=OFJ87581.1;transl_table=11 KV808276.1 Genbank gene 10969 11334 . - . ID=gene-HMPREF2844_10365;Name=HMPREF2844_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10365 KV808276.1 Protein Homology CDS 10969 11334 . - 0 ID=cds-OFJ87582.1;Parent=gene-HMPREF2844_10365;Dbxref=NCBI_GP:OFJ87582.1;Name=OFJ87582.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003679470.1;locus_tag=HMPREF2844_10365;product=50S ribosomal protein L19;protein_id=OFJ87582.1;transl_table=11 KV808276.1 Genbank gene 11348 12097 . - . ID=gene-HMPREF2844_10370;Name=HMPREF2844_10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10370 KV808276.1 Protein Homology CDS 11348 12097 . - 0 ID=cds-OFJ87583.1;Parent=gene-HMPREF2844_10370;Dbxref=NCBI_GP:OFJ87583.1;Name=OFJ87583.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9K0K4.1;locus_tag=HMPREF2844_10370;product=tRNA (guanine(37)-N(1))-methyltransferase;protein_id=OFJ87583.1;transl_table=11 KV808276.1 Genbank gene 12097 12606 . - . ID=gene-HMPREF2844_10375;Name=HMPREF2844_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10375 KV808276.1 Protein Homology CDS 12097 12606 . - 0 ID=cds-OFJ87584.1;Parent=gene-HMPREF2844_10375;Dbxref=NCBI_GP:OFJ87584.1;Name=OFJ87584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748672.1;locus_tag=HMPREF2844_10375;product=ribosome maturation factor RimM;protein_id=OFJ87584.1;transl_table=11 KV808276.1 Genbank gene 12625 12873 . - . ID=gene-HMPREF2844_10380;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF2844_10380 KV808276.1 Protein Homology CDS 12625 12873 . - 0 ID=cds-OFJ87585.1;Parent=gene-HMPREF2844_10380;Dbxref=NCBI_GP:OFJ87585.1;Name=OFJ87585.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740833.1;locus_tag=HMPREF2844_10380;product=30S ribosomal protein S16;protein_id=OFJ87585.1;transl_table=11 KV808276.1 Genbank gene 12950 15343 . - . ID=gene-HMPREF2844_10385;Name=HMPREF2844_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10385 KV808276.1 Protein Homology CDS 12950 15343 . - 0 ID=cds-OFJ87586.1;Parent=gene-HMPREF2844_10385;Dbxref=NCBI_GP:OFJ87586.1;Name=OFJ87586.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271451.1;locus_tag=HMPREF2844_10385;product=CoA-binding protein;protein_id=OFJ87586.1;transl_table=11 KV808276.1 Genbank gene 15768 17183 . - . ID=gene-HMPREF2844_10390;Name=HMPREF2844_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10390 KV808276.1 Protein Homology CDS 15768 17183 . - 0 ID=cds-OFJ87587.1;Parent=gene-HMPREF2844_10390;Dbxref=NCBI_GP:OFJ87587.1;Name=OFJ87587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758036.1;locus_tag=HMPREF2844_10390;product=two-component sensor histidine kinase;protein_id=OFJ87587.1;transl_table=11 KV808276.1 Genbank gene 17199 17876 . - . ID=gene-HMPREF2844_10395;Name=HMPREF2844_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10395 KV808276.1 Protein Homology CDS 17199 17876 . - 0 ID=cds-OFJ87588.1;Parent=gene-HMPREF2844_10395;Dbxref=NCBI_GP:OFJ87588.1;Name=OFJ87588.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003684348.1;locus_tag=HMPREF2844_10395;product=DNA-binding response regulator;protein_id=OFJ87588.1;transl_table=11 KV808276.1 Genbank gene 18401 19489 . + . ID=gene-HMPREF2844_10400;Name=HMPREF2844_10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10400 KV808276.1 Protein Homology CDS 18401 19489 . + 0 ID=cds-OFJ87484.1;Parent=gene-HMPREF2844_10400;Dbxref=NCBI_GP:OFJ87484.1;Name=OFJ87484.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519511.1;locus_tag=HMPREF2844_10400;product=prephenate dehydratase;protein_id=OFJ87484.1;transl_table=11 KV808276.1 Genbank gene 19557 20300 . - . ID=gene-HMPREF2844_10405;Name=HMPREF2844_10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10405 KV808276.1 Protein Homology CDS 19557 20300 . - 0 ID=cds-OFJ87485.1;Parent=gene-HMPREF2844_10405;Dbxref=NCBI_GP:OFJ87485.1;Name=OFJ87485.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003760007.1;locus_tag=HMPREF2844_10405;product=hypothetical protein;protein_id=OFJ87485.1;transl_table=11 KV808276.1 Genbank gene 20480 21931 . - . ID=gene-HMPREF2844_10410;Name=HMPREF2844_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10410 KV808276.1 Protein Homology CDS 20480 21931 . - 0 ID=cds-OFJ87486.1;Parent=gene-HMPREF2844_10410;Dbxref=NCBI_GP:OFJ87486.1;Name=OFJ87486.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740844.1;locus_tag=HMPREF2844_10410;product=patatin;protein_id=OFJ87486.1;transl_table=11 KV808276.1 Genbank gene 22095 22706 . - . ID=gene-HMPREF2844_10415;Name=HMPREF2844_10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10415 KV808276.1 Protein Homology CDS 22095 22706 . - 0 ID=cds-OFJ87487.1;Parent=gene-HMPREF2844_10415;Dbxref=NCBI_GP:OFJ87487.1;Name=OFJ87487.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687663.1;locus_tag=HMPREF2844_10415;product=glycerol-3-phosphate acyltransferase;protein_id=OFJ87487.1;transl_table=11 KV808276.1 Genbank gene 22764 23114 . + . ID=gene-HMPREF2844_10420;Name=HMPREF2844_10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10420 KV808276.1 Protein Homology CDS 22764 23114 . + 0 ID=cds-OFJ87488.1;Parent=gene-HMPREF2844_10420;Dbxref=NCBI_GP:OFJ87488.1;Name=OFJ87488.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762738.1;locus_tag=HMPREF2844_10420;product=dienelactone hydrolase;protein_id=OFJ87488.1;transl_table=11 KV808276.1 Genbank gene 23272 23805 . + . ID=gene-HMPREF2844_10425;Name=HMPREF2844_10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10425 KV808276.1 Protein Homology CDS 23272 23805 . + 0 ID=cds-OFJ87489.1;Parent=gene-HMPREF2844_10425;Dbxref=NCBI_GP:OFJ87489.1;Name=OFJ87489.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003754827.1;locus_tag=HMPREF2844_10425;product=ADP-ribose pyrophosphatase;protein_id=OFJ87489.1;transl_table=11 KV808276.1 Genbank gene 23874 24296 . - . ID=gene-HMPREF2844_10430;Name=HMPREF2844_10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10430 KV808276.1 Protein Homology CDS 23874 24296 . - 0 ID=cds-OFJ87490.1;Parent=gene-HMPREF2844_10430;Dbxref=NCBI_GP:OFJ87490.1;Name=OFJ87490.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763112.1;locus_tag=HMPREF2844_10430;product=ribosomal protein P2;protein_id=OFJ87490.1;transl_table=11 KV808276.1 Genbank gene 24491 25474 . - . ID=gene-HMPREF2844_10435;Name=HMPREF2844_10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10435 KV808276.1 Protein Homology CDS 24491 25474 . - 0 ID=cds-OFJ87491.1;Parent=gene-HMPREF2844_10435;Dbxref=NCBI_GP:OFJ87491.1;Name=OFJ87491.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271443.1;locus_tag=HMPREF2844_10435;product=hypothetical protein;protein_id=OFJ87491.1;transl_table=11 KV808276.1 Genbank gene 25640 26608 . + . ID=gene-HMPREF2844_10440;Name=HMPREF2844_10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10440 KV808276.1 Protein Homology CDS 25640 26608 . + 0 ID=cds-OFJ87492.1;Parent=gene-HMPREF2844_10440;Dbxref=NCBI_GP:OFJ87492.1;Name=OFJ87492.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312249.1;locus_tag=HMPREF2844_10440;product=hypothetical protein;protein_id=OFJ87492.1;transl_table=11 KV808276.1 Genbank gene 26702 27178 . - . ID=gene-HMPREF2844_10445;Name=HMPREF2844_10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10445 KV808276.1 Protein Homology CDS 26702 27178 . - 0 ID=cds-OFJ87493.1;Parent=gene-HMPREF2844_10445;Dbxref=NCBI_GP:OFJ87493.1;Name=OFJ87493.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687657.1;locus_tag=HMPREF2844_10445;product=crossover junction endodeoxyribonuclease RuvA;protein_id=OFJ87493.1;transl_table=11 KV808276.1 Genbank gene 27171 27719 . - . ID=gene-HMPREF2844_10450;Name=HMPREF2844_10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10450 KV808276.1 Protein Homology CDS 27171 27719 . - 0 ID=cds-OFJ87494.1;Parent=gene-HMPREF2844_10450;Dbxref=NCBI_GP:OFJ87494.1;Name=OFJ87494.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003713629.1;locus_tag=HMPREF2844_10450;product=hypothetical protein;protein_id=OFJ87494.1;transl_table=11 KV808276.1 Genbank gene 27732 28280 . - . ID=gene-HMPREF2844_10455;Name=HMPREF2844_10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10455 KV808276.1 Protein Homology CDS 27732 28280 . - 0 ID=cds-OFJ87495.1;Parent=gene-HMPREF2844_10455;Dbxref=NCBI_GP:OFJ87495.1;Name=OFJ87495.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271439.1;locus_tag=HMPREF2844_10455;product=CreA protein;protein_id=OFJ87495.1;transl_table=11 KV808276.1 Genbank gene 28477 30231 . + . ID=gene-HMPREF2844_10460;Name=HMPREF2844_10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10460 KV808276.1 Protein Homology CDS 28477 30231 . + 0 ID=cds-OFJ87520.1;Parent=gene-HMPREF2844_10460;Dbxref=NCBI_GP:OFJ87520.1;Name=OFJ87520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778098.1;locus_tag=HMPREF2844_10460;product=hypothetical protein;protein_id=OFJ87520.1;transl_table=11 KV808276.1 Genbank gene 30651 32153 . + . ID=gene-HMPREF2844_10465;Name=HMPREF2844_10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10465 KV808276.1 Protein Homology CDS 30651 32153 . + 0 ID=cds-OFJ87496.1;Parent=gene-HMPREF2844_10465;Dbxref=NCBI_GP:OFJ87496.1;Name=OFJ87496.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740863.1;locus_tag=HMPREF2844_10465;product=peptidase S41;protein_id=OFJ87496.1;transl_table=11 KV808276.1 Genbank gene 32221 34110 . - . ID=gene-HMPREF2844_10470;Name=HMPREF2844_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10470 KV808276.1 Protein Homology CDS 32221 34110 . - 0 ID=cds-OFJ87497.1;Parent=gene-HMPREF2844_10470;Dbxref=NCBI_GP:OFJ87497.1;Name=OFJ87497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680474.1;locus_tag=HMPREF2844_10470;product=DEAD/DEAH box helicase;protein_id=OFJ87497.1;transl_table=11 KV808276.1 Genbank gene 34111 35148 . - . ID=gene-HMPREF2844_10475;Name=HMPREF2844_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10475 KV808276.1 Protein Homology CDS 34111 35148 . - 0 ID=cds-OFJ87498.1;Parent=gene-HMPREF2844_10475;Dbxref=NCBI_GP:OFJ87498.1;Name=OFJ87498.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680475.1;locus_tag=HMPREF2844_10475;product=restriction endonuclease;protein_id=OFJ87498.1;transl_table=11 KV808276.1 Genbank gene 35145 36269 . - . ID=gene-HMPREF2844_10480;Name=HMPREF2844_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10480 KV808276.1 Protein Homology CDS 35145 36269 . - 0 ID=cds-OFJ87499.1;Parent=gene-HMPREF2844_10480;Dbxref=NCBI_GP:OFJ87499.1;Name=OFJ87499.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221464.1;locus_tag=HMPREF2844_10480;product=DNA cytosine methyltransferase;protein_id=OFJ87499.1;transl_table=11 KV808276.1 Genbank gene 36597 37976 . + . ID=gene-HMPREF2844_10485;Name=HMPREF2844_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10485 KV808276.1 Protein Homology CDS 36597 37976 . + 0 ID=cds-OFJ87500.1;Parent=gene-HMPREF2844_10485;Dbxref=NCBI_GP:OFJ87500.1;Name=OFJ87500.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687652.1;locus_tag=HMPREF2844_10485;product=DNA repair protein RadA;protein_id=OFJ87500.1;transl_table=11 KV808276.1 Genbank gene 38355 38801 . + . ID=gene-HMPREF2844_10490;Name=HMPREF2844_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10490 KV808276.1 Protein Homology CDS 38355 38801 . + 0 ID=cds-OFJ87501.1;Parent=gene-HMPREF2844_10490;Dbxref=NCBI_GP:OFJ87501.1;Name=OFJ87501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273200.1;locus_tag=HMPREF2844_10490;product=SsrA-binding protein;protein_id=OFJ87501.1;transl_table=11 KV808276.1 Genbank gene 38980 39318 . + . ID=gene-HMPREF2844_10495;Name=HMPREF2844_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10495 KV808276.1 Protein Homology CDS 38980 39318 . + 0 ID=cds-OFJ87502.1;Parent=gene-HMPREF2844_10495;Dbxref=NCBI_GP:OFJ87502.1;Name=OFJ87502.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740867.1;locus_tag=HMPREF2844_10495;product=hypothetical protein;protein_id=OFJ87502.1;transl_table=11 KV808276.1 Genbank gene 39445 41010 . + . ID=gene-HMPREF2844_10500;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF2844_10500 KV808276.1 Protein Homology CDS 39445 41010 . + 0 ID=cds-OFJ87503.1;Parent=gene-HMPREF2844_10500;Dbxref=NCBI_GP:OFJ87503.1;Name=OFJ87503.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002221566.1;locus_tag=HMPREF2844_10500;product=GMP synthetase;protein_id=OFJ87503.1;transl_table=11 KV808276.1 Genbank gene 41350 42936 . + . ID=gene-HMPREF2844_10505;Name=HMPREF2844_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10505 KV808276.1 Protein Homology CDS 41350 42936 . + 0 ID=cds-OFJ87504.1;Parent=gene-HMPREF2844_10505;Dbxref=NCBI_GP:OFJ87504.1;Name=OFJ87504.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003695593.1;locus_tag=HMPREF2844_10505;product=lactate permease;protein_id=OFJ87504.1;transl_table=11 KV808276.1 Genbank gene 43068 43712 . + . ID=gene-HMPREF2844_10510;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=HMPREF2844_10510 KV808276.1 Protein Homology CDS 43068 43712 . + 0 ID=cds-OFJ87505.1;Parent=gene-HMPREF2844_10510;Dbxref=NCBI_GP:OFJ87505.1;Name=OFJ87505.1;Note=with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide;gbkey=CDS;gene=hisH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748657.1;locus_tag=HMPREF2844_10510;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=OFJ87505.1;transl_table=11 KV808276.1 Genbank gene 43874 44611 . + . ID=gene-HMPREF2844_10515;Name=HMPREF2844_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10515 KV808276.1 Protein Homology CDS 43874 44611 . + 0 ID=cds-OFJ87506.1;Parent=gene-HMPREF2844_10515;Dbxref=NCBI_GP:OFJ87506.1;Name=OFJ87506.1;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313164.1;locus_tag=HMPREF2844_10515;product=1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase;protein_id=OFJ87506.1;transl_table=11 KV808276.1 Genbank gene 44970 45287 . + . ID=gene-HMPREF2844_10520;Name=HMPREF2844_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10520 KV808276.1 Protein Homology CDS 44970 45287 . + 0 ID=cds-OFJ87507.1;Parent=gene-HMPREF2844_10520;Dbxref=NCBI_GP:OFJ87507.1;Name=OFJ87507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687646.1;locus_tag=HMPREF2844_10520;product=multidrug transporter MatE;protein_id=OFJ87507.1;transl_table=11 KV808276.1 Genbank gene 45456 46223 . + . ID=gene-HMPREF2844_10525;Name=HMPREF2844_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10525 KV808276.1 Protein Homology CDS 45456 46223 . + 0 ID=cds-OFJ87508.1;Parent=gene-HMPREF2844_10525;Dbxref=NCBI_GP:OFJ87508.1;Name=OFJ87508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251159.1;locus_tag=HMPREF2844_10525;product=imidazole glycerol phosphate synthase cyclase subunit;protein_id=OFJ87508.1;transl_table=11 KV808276.1 Genbank gene 46323 46721 . + . ID=gene-HMPREF2844_10530;Name=HMPREF2844_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10530 KV808276.1 Protein Homology CDS 46323 46721 . + 0 ID=cds-OFJ87509.1;Parent=gene-HMPREF2844_10530;Dbxref=NCBI_GP:OFJ87509.1;Name=OFJ87509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313163.1;locus_tag=HMPREF2844_10530;product=phosphoribosyl-AMP cyclohydrolase;protein_id=OFJ87509.1;transl_table=11 KV808276.1 Genbank gene 46882 47205 . + . ID=gene-HMPREF2844_10535;Name=HMPREF2844_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10535 KV808276.1 Protein Homology CDS 46882 47205 . + 0 ID=cds-OFJ87510.1;Parent=gene-HMPREF2844_10535;Dbxref=NCBI_GP:OFJ87510.1;Name=OFJ87510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009313162.1;locus_tag=HMPREF2844_10535;product=phosphoribosyl-ATP pyrophosphatase;protein_id=OFJ87510.1;transl_table=11 KV808276.1 Genbank gene 47319 47642 . + . ID=gene-HMPREF2844_10540;Name=HMPREF2844_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10540 KV808276.1 Protein Homology CDS 47319 47642 . + 0 ID=cds-OFJ87511.1;Parent=gene-HMPREF2844_10540;Dbxref=NCBI_GP:OFJ87511.1;Name=OFJ87511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013449364.1;locus_tag=HMPREF2844_10540;product=histidine triad nucleotide-binding protein;protein_id=OFJ87511.1;transl_table=11 KV808276.1 Genbank gene 47688 47882 . + . ID=gene-HMPREF2844_10545;Name=HMPREF2844_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10545 KV808276.1 Protein Homology CDS 47688 47882 . + 0 ID=cds-OFJ87512.1;Parent=gene-HMPREF2844_10545;Dbxref=NCBI_GP:OFJ87512.1;Name=OFJ87512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219659.1;locus_tag=HMPREF2844_10545;product=preprotein translocase subunit TatA;protein_id=OFJ87512.1;transl_table=11 KV808276.1 Genbank gene 47890 48564 . + . ID=gene-HMPREF2844_10550;Name=HMPREF2844_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10550 KV808276.1 Protein Homology CDS 47890 48564 . + 0 ID=cds-OFJ87513.1;Parent=gene-HMPREF2844_10550;Dbxref=NCBI_GP:OFJ87513.1;Name=OFJ87513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271429.1;locus_tag=HMPREF2844_10550;product=twin arginine-targeting protein translocase TatB;protein_id=OFJ87513.1;transl_table=11 KV808276.1 Genbank gene 48573 49349 . + . ID=gene-HMPREF2844_10555;Name=HMPREF2844_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10555 KV808276.1 Protein Homology CDS 48573 49349 . + 0 ID=cds-OFJ87514.1;Parent=gene-HMPREF2844_10555;Dbxref=NCBI_GP:OFJ87514.1;Name=OFJ87514.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003769012.1;locus_tag=HMPREF2844_10555;product=twin-arginine protein translocation system subunit TatC;protein_id=OFJ87514.1;transl_table=11 KV808276.1 Genbank gene 49507 49791 . + . ID=gene-HMPREF2844_10560;Name=HMPREF2844_10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10560 KV808276.1 Protein Homology CDS 49507 49791 . + 0 ID=cds-OFJ87515.1;Parent=gene-HMPREF2844_10560;Dbxref=NCBI_GP:OFJ87515.1;Name=OFJ87515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740886.1;locus_tag=HMPREF2844_10560;product=peptidase propeptide and YPEB domain protein;protein_id=OFJ87515.1;transl_table=11 KV808276.1 Genbank gene 50012 51967 . + . ID=gene-HMPREF2844_10565;Name=HMPREF2844_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10565 KV808276.1 Protein Homology CDS 50012 51967 . + 0 ID=cds-OFJ87516.1;Parent=gene-HMPREF2844_10565;Dbxref=NCBI_GP:OFJ87516.1;Name=OFJ87516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763023.1;locus_tag=HMPREF2844_10565;product=hypothetical protein;protein_id=OFJ87516.1;transl_table=11 KV808276.1 Genbank gene 52480 53133 . + . ID=gene-HMPREF2844_10570;Name=HMPREF2844_10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10570 KV808276.1 Protein Homology CDS 52480 53133 . + 0 ID=cds-OFJ87517.1;Parent=gene-HMPREF2844_10570;Dbxref=NCBI_GP:OFJ87517.1;Name=OFJ87517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271425.1;locus_tag=HMPREF2844_10570;product=isochorismatase;protein_id=OFJ87517.1;transl_table=11 KV808276.1 Genbank gene 53458 53533 . + . ID=gene-HMPREF2844_10575;Name=HMPREF2844_10575;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_10575 KV808276.1 tRNAscan-SE tRNA 53458 53533 . + . ID=rna-HMPREF2844_10575;Parent=gene-HMPREF2844_10575;anticodon=(pos:53491..53493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10575;product=tRNA-Met KV808276.1 tRNAscan-SE exon 53458 53533 . + . ID=exon-HMPREF2844_10575-1;Parent=rna-HMPREF2844_10575;anticodon=(pos:53491..53493);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10575;product=tRNA-Met KV808276.1 Genbank gene 53792 55132 . + . ID=gene-HMPREF2844_10580;Name=HMPREF2844_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10580 KV808276.1 Protein Homology CDS 53792 55132 . + 0 ID=cds-OFJ87521.1;Parent=gene-HMPREF2844_10580;Dbxref=NCBI_GP:OFJ87521.1;Name=OFJ87521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520635.1;locus_tag=HMPREF2844_10580;product=transporter;protein_id=OFJ87521.1;transl_table=11 KV808276.1 Genbank gene 55252 56259 . - . ID=gene-HMPREF2844_10585;Name=HMPREF2844_10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10585 KV808276.1 Protein Homology CDS 55252 56259 . - 0 ID=cds-OFJ87518.1;Parent=gene-HMPREF2844_10585;Dbxref=NCBI_GP:OFJ87518.1;Name=OFJ87518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776849.1;locus_tag=HMPREF2844_10585;product=NosX protein;protein_id=OFJ87518.1;transl_table=11 KV808276.1 Genbank gene 56505 57581 . - . ID=gene-HMPREF2844_10590;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF2844_10590 KV808276.1 Protein Homology CDS 56505 57581 . - 0 ID=cds-OFJ87519.1;Parent=gene-HMPREF2844_10590;Dbxref=NCBI_GP:OFJ87519.1;Name=OFJ87519.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003790927.1;locus_tag=HMPREF2844_10590;product=peptide chain release factor 1;protein_id=OFJ87519.1;transl_table=11 KV808276.1 Genbank gene 57850 58536 . - . ID=gene-HMPREF2844_10595;Name=HMPREF2844_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10595 KV808276.1 Protein Homology CDS 57850 58536 . - 0 ID=cds-OFJ87448.1;Parent=gene-HMPREF2844_10595;Dbxref=NCBI_GP:OFJ87448.1;Name=OFJ87448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002219875.1;locus_tag=HMPREF2844_10595;product=methionine ABC transporter ATP-binding protein;protein_id=OFJ87448.1;transl_table=11 KV808276.1 Genbank gene 58538 59275 . - . ID=gene-HMPREF2844_10600;Name=HMPREF2844_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10600 KV808276.1 Protein Homology CDS 58538 59275 . - 0 ID=cds-OFJ87449.1;Parent=gene-HMPREF2844_10600;Dbxref=NCBI_GP:OFJ87449.1;Name=OFJ87449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006227331.1;locus_tag=HMPREF2844_10600;product=hypothetical protein;protein_id=OFJ87449.1;transl_table=11 KV808276.1 Genbank gene 59503 59703 . - . ID=gene-HMPREF2844_10605;Name=HMPREF2844_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10605 KV808276.1 Protein Homology CDS 59503 59703 . - 0 ID=cds-OFJ87450.1;Parent=gene-HMPREF2844_10605;Dbxref=NCBI_GP:OFJ87450.1;Name=OFJ87450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003759971.1;locus_tag=HMPREF2844_10605;product=hypothetical protein;protein_id=OFJ87450.1;transl_table=11 KV808276.1 Genbank gene 59791 61212 . - . ID=gene-HMPREF2844_10610;Name=HMPREF2844_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10610 KV808276.1 Protein Homology CDS 59791 61212 . - 0 ID=cds-OFJ87451.1;Parent=gene-HMPREF2844_10610;Dbxref=NCBI_GP:OFJ87451.1;Name=OFJ87451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003773836.1;locus_tag=HMPREF2844_10610;product=coproporphyrinogen III oxidase;protein_id=OFJ87451.1;transl_table=11 KV808276.1 Genbank gene 61356 62090 . + . ID=gene-HMPREF2844_10615;Name=HMPREF2844_10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10615 KV808276.1 Protein Homology CDS 61356 62090 . + 0 ID=cds-OFJ87452.1;Parent=gene-HMPREF2844_10615;Dbxref=NCBI_GP:OFJ87452.1;Name=OFJ87452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013448471.1;locus_tag=HMPREF2844_10615;product=transcriptional regulator;protein_id=OFJ87452.1;transl_table=11 KV808276.1 Genbank pseudogene 62163 62623 . - . ID=gene-HMPREF2844_10620;Name=HMPREF2844_10620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10620;pseudo=true KV808276.1 Protein Homology CDS 62163 62623 . - 0 ID=cds-HMPREF2844_10620;Parent=gene-HMPREF2844_10620;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686990.1;locus_tag=HMPREF2844_10620;product=CDP-paratose synthetase;pseudo=true;transl_table=11 KV808276.1 Genbank gene 62872 65343 . - . ID=gene-HMPREF2844_10625;Name=HMPREF2844_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10625 KV808276.1 Protein Homology CDS 62872 65343 . - 0 ID=cds-OFJ87453.1;Parent=gene-HMPREF2844_10625;Dbxref=NCBI_GP:OFJ87453.1;Name=OFJ87453.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003763940.1;locus_tag=HMPREF2844_10625;product=DNA ligase (NAD(+)) LigA;protein_id=OFJ87453.1;transl_table=11 KV808276.1 Genbank gene 65481 66737 . - . ID=gene-HMPREF2844_10630;Name=HMPREF2844_10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10630 KV808276.1 Protein Homology CDS 65481 66737 . - 0 ID=cds-OFJ87454.1;Parent=gene-HMPREF2844_10630;Dbxref=NCBI_GP:OFJ87454.1;Name=OFJ87454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778316.1;locus_tag=HMPREF2844_10630;product=cell division protein ZipA;protein_id=OFJ87454.1;transl_table=11 KV808276.1 Genbank gene 66973 67545 . - . ID=gene-HMPREF2844_10635;Name=HMPREF2844_10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10635 KV808276.1 Protein Homology CDS 66973 67545 . - 0 ID=cds-OFJ87455.1;Parent=gene-HMPREF2844_10635;Dbxref=NCBI_GP:OFJ87455.1;Name=OFJ87455.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675628.1;locus_tag=HMPREF2844_10635;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=OFJ87455.1;transl_table=11 KV808276.1 Genbank gene 67674 68669 . + . ID=gene-HMPREF2844_10640;Name=HMPREF2844_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10640 KV808276.1 Protein Homology CDS 67674 68669 . + 0 ID=cds-OFJ87459.1;Parent=gene-HMPREF2844_10640;Dbxref=NCBI_GP:OFJ87459.1;Name=OFJ87459.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520116.1;locus_tag=HMPREF2844_10640;product=aminodeoxychorismate lyase;protein_id=OFJ87459.1;transl_table=11 KV808276.1 Genbank gene 68750 70450 . - . ID=gene-HMPREF2844_10645;Name=HMPREF2844_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10645 KV808276.1 Protein Homology CDS 68750 70450 . - 0 ID=cds-OFJ87456.1;Parent=gene-HMPREF2844_10645;Dbxref=NCBI_GP:OFJ87456.1;Name=OFJ87456.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014581495.1;locus_tag=HMPREF2844_10645;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=OFJ87456.1;transl_table=11 KV808276.1 Genbank gene 70597 70872 . - . ID=gene-HMPREF2844_10650;Name=HMPREF2844_10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10650 KV808276.1 Protein Homology CDS 70597 70872 . - 0 ID=cds-OFJ87457.1;Parent=gene-HMPREF2844_10650;Dbxref=NCBI_GP:OFJ87457.1;Name=OFJ87457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686996.1;locus_tag=HMPREF2844_10650;product=oxidoreductase;protein_id=OFJ87457.1;transl_table=11 KV808276.1 Genbank gene 70934 71128 . + . ID=gene-HMPREF2844_10655;Name=HMPREF2844_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10655 KV808276.1 Protein Homology CDS 70934 71128 . + 0 ID=cds-OFJ87460.1;Parent=gene-HMPREF2844_10655;Dbxref=NCBI_GP:OFJ87460.1;Name=OFJ87460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003771469.1;locus_tag=HMPREF2844_10655;product=hypothetical protein;protein_id=OFJ87460.1;transl_table=11 KV808276.1 Genbank gene 71345 71716 . - . ID=gene-HMPREF2844_10660;Name=HMPREF2844_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10660 KV808276.1 Protein Homology CDS 71345 71716 . - 0 ID=cds-OFJ87458.1;Parent=gene-HMPREF2844_10660;Dbxref=NCBI_GP:OFJ87458.1;Name=OFJ87458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755076.1;locus_tag=HMPREF2844_10660;product=adhesin;protein_id=OFJ87458.1;transl_table=11 KV808276.1 Genbank gene 72272 73540 . + . ID=gene-HMPREF2844_10665;Name=HMPREF2844_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10665 KV808276.1 Protein Homology CDS 72272 73540 . + 0 ID=cds-OFJ87461.1;Parent=gene-HMPREF2844_10665;Dbxref=NCBI_GP:OFJ87461.1;Name=OFJ87461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686173.1;locus_tag=HMPREF2844_10665;product=hypothetical protein;protein_id=OFJ87461.1;transl_table=11 ##sequence-region KV808277.1 1 30340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808277.1 Genbank region 1 30340 . + . ID=KV808277.1:1..30340;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808277.1 Genbank gene 136 1401 . - . ID=gene-HMPREF2844_10670;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;locus_tag=HMPREF2844_10670 KV808277.1 Protein Homology CDS 136 1401 . - 0 ID=cds-OFJ86612.1;Parent=gene-HMPREF2844_10670;Dbxref=NCBI_GP:OFJ86612.1;Name=OFJ86612.1;Note=catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis;gbkey=CDS;gene=ispG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687792.1;locus_tag=HMPREF2844_10670;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=OFJ86612.1;transl_table=11 KV808277.1 Genbank gene 1404 2276 . - . ID=gene-HMPREF2844_10675;Name=HMPREF2844_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10675 KV808277.1 Protein Homology CDS 1404 2276 . - 0 ID=cds-OFJ86613.1;Parent=gene-HMPREF2844_10675;Dbxref=NCBI_GP:OFJ86613.1;Name=OFJ86613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687791.1;locus_tag=HMPREF2844_10675;product=Cro/Cl family transcriptional regulator;protein_id=OFJ86613.1;transl_table=11 KV808277.1 Genbank gene 2281 3036 . - . ID=gene-HMPREF2844_10680;Name=HMPREF2844_10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10680 KV808277.1 Protein Homology CDS 2281 3036 . - 0 ID=cds-OFJ86614.1;Parent=gene-HMPREF2844_10680;Dbxref=NCBI_GP:OFJ86614.1;Name=OFJ86614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687790.1;locus_tag=HMPREF2844_10680;product=type IV pilus biogenesis/stability protein PilW;protein_id=OFJ86614.1;transl_table=11 KV808277.1 Genbank gene 3039 4133 . - . ID=gene-HMPREF2844_10685;Name=HMPREF2844_10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10685 KV808277.1 Protein Homology CDS 3039 4133 . - 0 ID=cds-OFJ86615.1;Parent=gene-HMPREF2844_10685;Dbxref=NCBI_GP:OFJ86615.1;Name=OFJ86615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312955.1;locus_tag=HMPREF2844_10685;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=OFJ86615.1;transl_table=11 KV808277.1 Genbank gene 4399 4824 . - . ID=gene-HMPREF2844_10690;Name=HMPREF2844_10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10690 KV808277.1 Protein Homology CDS 4399 4824 . - 0 ID=cds-OFJ86616.1;Parent=gene-HMPREF2844_10690;Dbxref=NCBI_GP:OFJ86616.1;Name=OFJ86616.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B4RMG0.1;locus_tag=HMPREF2844_10690;product=nucleoside-diphosphate kinase;protein_id=OFJ86616.1;transl_table=11 KV808277.1 Genbank gene 4943 6079 . - . ID=gene-HMPREF2844_10695;Name=HMPREF2844_10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10695 KV808277.1 Protein Homology CDS 4943 6079 . - 0 ID=cds-OFJ86617.1;Parent=gene-HMPREF2844_10695;Dbxref=NCBI_GP:OFJ86617.1;Name=OFJ86617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687787.1;locus_tag=HMPREF2844_10695;product=ATPase;protein_id=OFJ86617.1;transl_table=11 KV808277.1 Genbank gene 6280 6594 . - . ID=gene-HMPREF2844_10700;Name=HMPREF2844_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10700 KV808277.1 Protein Homology CDS 6280 6594 . - 0 ID=cds-OFJ86618.1;Parent=gene-HMPREF2844_10700;Dbxref=NCBI_GP:OFJ86618.1;Name=OFJ86618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744632.1;locus_tag=HMPREF2844_10700;product=integration host factor subunit beta;protein_id=OFJ86618.1;transl_table=11 KV808277.1 Genbank gene 6605 8284 . - . ID=gene-HMPREF2844_10705;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=HMPREF2844_10705 KV808277.1 Protein Homology CDS 6605 8284 . - 0 ID=cds-OFJ86638.1;Parent=gene-HMPREF2844_10705;Dbxref=NCBI_GP:OFJ86638.1;Name=OFJ86638.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343488.1;locus_tag=HMPREF2844_10705;product=30S ribosomal protein S1;protein_id=OFJ86638.1;transl_table=11 KV808277.1 Genbank gene 8446 9105 . - . ID=gene-HMPREF2844_10710;Name=HMPREF2844_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10710 KV808277.1 Protein Homology CDS 8446 9105 . - 0 ID=cds-OFJ86619.1;Parent=gene-HMPREF2844_10710;Dbxref=NCBI_GP:OFJ86619.1;Name=OFJ86619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678996.1;locus_tag=HMPREF2844_10710;product=cytidylate kinase;protein_id=OFJ86619.1;transl_table=11 KV808277.1 Genbank gene 9332 10711 . - . ID=gene-HMPREF2844_10715;Name=HMPREF2844_10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10715 KV808277.1 Protein Homology CDS 9332 10711 . - 0 ID=cds-OFJ86620.1;Parent=gene-HMPREF2844_10715;Dbxref=NCBI_GP:OFJ86620.1;Name=OFJ86620.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311883.1;locus_tag=HMPREF2844_10715;product=argininosuccinate lyase;protein_id=OFJ86620.1;transl_table=11 KV808277.1 Genbank gene 10790 11830 . + . ID=gene-HMPREF2844_10720;Name=HMPREF2844_10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10720 KV808277.1 Protein Homology CDS 10790 11830 . + 0 ID=cds-OFJ86621.1;Parent=gene-HMPREF2844_10720;Dbxref=NCBI_GP:OFJ86621.1;Name=OFJ86621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003755259.1;locus_tag=HMPREF2844_10720;product=histidine kinase;protein_id=OFJ86621.1;transl_table=11 KV808277.1 Genbank gene 11921 12562 . - . ID=gene-HMPREF2844_10725;Name=HMPREF2844_10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10725 KV808277.1 Protein Homology CDS 11921 12562 . - 0 ID=cds-OFJ86622.1;Parent=gene-HMPREF2844_10725;Dbxref=NCBI_GP:OFJ86622.1;Name=OFJ86622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271005.1;locus_tag=HMPREF2844_10725;product=glutathione S-transferase;protein_id=OFJ86622.1;transl_table=11 KV808277.1 Genbank gene 12629 13147 . - . ID=gene-HMPREF2844_10730;Name=HMPREF2844_10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10730 KV808277.1 Protein Homology CDS 12629 13147 . - 0 ID=cds-OFJ86623.1;Parent=gene-HMPREF2844_10730;Dbxref=NCBI_GP:OFJ86623.1;Name=OFJ86623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687781.1;locus_tag=HMPREF2844_10730;product=hypothetical protein;protein_id=OFJ86623.1;transl_table=11 KV808277.1 Genbank gene 13147 14808 . - . ID=gene-HMPREF2844_10735;Name=HMPREF2844_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10735 KV808277.1 Protein Homology CDS 13147 14808 . - 0 ID=cds-OFJ86624.1;Parent=gene-HMPREF2844_10735;Dbxref=NCBI_GP:OFJ86624.1;Name=OFJ86624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271007.1;locus_tag=HMPREF2844_10735;product=paraquat-inducible protein B;protein_id=OFJ86624.1;transl_table=11 KV808277.1 Genbank gene 14805 16115 . - . ID=gene-HMPREF2844_10740;Name=HMPREF2844_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10740 KV808277.1 Protein Homology CDS 14805 16115 . - 0 ID=cds-OFJ86625.1;Parent=gene-HMPREF2844_10740;Dbxref=NCBI_GP:OFJ86625.1;Name=OFJ86625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311206.1;locus_tag=HMPREF2844_10740;product=PqiA family protein;protein_id=OFJ86625.1;transl_table=11 KV808277.1 Genbank gene 16419 17636 . - . ID=gene-HMPREF2844_10745;Name=HMPREF2844_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10745 KV808277.1 Protein Homology CDS 16419 17636 . - 0 ID=cds-OFJ86626.1;Parent=gene-HMPREF2844_10745;Dbxref=NCBI_GP:OFJ86626.1;Name=OFJ86626.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%2C in Bacillus%2C lysine sensitive%3B regulated by response to starvation.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019273420.1;locus_tag=HMPREF2844_10745;product=aspartate kinase;protein_id=OFJ86626.1;transl_table=11 KV808277.1 Genbank gene 18027 18455 . + . ID=gene-HMPREF2844_10750;Name=HMPREF2844_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10750 KV808277.1 Protein Homology CDS 18027 18455 . + 0 ID=cds-OFJ86627.1;Parent=gene-HMPREF2844_10750;Dbxref=NCBI_GP:OFJ86627.1;Name=OFJ86627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007342913.1;locus_tag=HMPREF2844_10750;product=transporter;protein_id=OFJ86627.1;transl_table=11 KV808277.1 Genbank gene 18532 19272 . - . ID=gene-HMPREF2844_10755;Name=HMPREF2844_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10755 KV808277.1 Protein Homology CDS 18532 19272 . - 0 ID=cds-OFJ86628.1;Parent=gene-HMPREF2844_10755;Dbxref=NCBI_GP:OFJ86628.1;Name=OFJ86628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687776.1;locus_tag=HMPREF2844_10755;product=ribonuclease PH;protein_id=OFJ86628.1;transl_table=11 KV808277.1 Genbank gene 19434 20315 . + . ID=gene-HMPREF2844_10760;Name=HMPREF2844_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10760 KV808277.1 Protein Homology CDS 19434 20315 . + 0 ID=cds-OFJ86629.1;Parent=gene-HMPREF2844_10760;Dbxref=NCBI_GP:OFJ86629.1;Name=OFJ86629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778514.1;locus_tag=HMPREF2844_10760;product=hypothetical protein;protein_id=OFJ86629.1;transl_table=11 KV808277.1 Genbank gene 20528 21916 . + . ID=gene-HMPREF2844_10765;Name=HMPREF2844_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10765 KV808277.1 Protein Homology CDS 20528 21916 . + 0 ID=cds-OFJ86630.1;Parent=gene-HMPREF2844_10765;Dbxref=NCBI_GP:OFJ86630.1;Name=OFJ86630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311574.1;locus_tag=HMPREF2844_10765;product=class II fumarate hydratase;protein_id=OFJ86630.1;transl_table=11 KV808277.1 Genbank gene 22102 23241 . + . ID=gene-HMPREF2844_10770;Name=HMPREF2844_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10770 KV808277.1 Protein Homology CDS 22102 23241 . + 0 ID=cds-OFJ86631.1;Parent=gene-HMPREF2844_10770;Dbxref=NCBI_GP:OFJ86631.1;Name=OFJ86631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002232862.1;locus_tag=HMPREF2844_10770;product=DNA methylase;protein_id=OFJ86631.1;transl_table=11 KV808277.1 Genbank gene 23314 23721 . - . ID=gene-HMPREF2844_10775;Name=HMPREF2844_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10775 KV808277.1 Protein Homology CDS 23314 23721 . - 0 ID=cds-OFJ86632.1;Parent=gene-HMPREF2844_10775;Dbxref=NCBI_GP:OFJ86632.1;Name=OFJ86632.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009425306.1;locus_tag=HMPREF2844_10775;product=lactoylglutathione lyase;protein_id=OFJ86632.1;transl_table=11 KV808277.1 Genbank gene 23940 25481 . + . ID=gene-HMPREF2844_10780;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=HMPREF2844_10780 KV808277.1 Protein Homology CDS 23940 25481 . + 0 ID=cds-OFJ86633.1;Parent=gene-HMPREF2844_10780;Dbxref=NCBI_GP:OFJ86633.1;Name=OFJ86633.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002246831.1;locus_tag=HMPREF2844_10780;product=NAD(P) transhydrogenase subunit alpha;protein_id=OFJ86633.1;transl_table=11 KV808277.1 Genbank gene 25485 25868 . + . ID=gene-HMPREF2844_10785;Name=HMPREF2844_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10785 KV808277.1 Protein Homology CDS 25485 25868 . + 0 ID=cds-OFJ86634.1;Parent=gene-HMPREF2844_10785;Dbxref=NCBI_GP:OFJ86634.1;Name=OFJ86634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744140.1;locus_tag=HMPREF2844_10785;product=hypothetical protein;protein_id=OFJ86634.1;transl_table=11 KV808277.1 Genbank gene 25985 26386 . + . ID=gene-HMPREF2844_10790;Name=HMPREF2844_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10790 KV808277.1 Protein Homology CDS 25985 26386 . + 0 ID=cds-OFJ86635.1;Parent=gene-HMPREF2844_10790;Dbxref=NCBI_GP:OFJ86635.1;Name=OFJ86635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003765117.1;locus_tag=HMPREF2844_10790;product=aldehyde-activating protein;protein_id=OFJ86635.1;transl_table=11 KV808277.1 Genbank gene 26572 27957 . + . ID=gene-HMPREF2844_10795;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=HMPREF2844_10795 KV808277.1 Protein Homology CDS 26572 27957 . + 0 ID=cds-OFJ86636.1;Parent=gene-HMPREF2844_10795;Dbxref=NCBI_GP:OFJ86636.1;Name=OFJ86636.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676645.1;locus_tag=HMPREF2844_10795;product=NAD(P) transhydrogenase subunit beta;protein_id=OFJ86636.1;transl_table=11 KV808277.1 Genbank gene 28317 29286 . + . ID=gene-HMPREF2844_10800;Name=HMPREF2844_10800;end_range=29286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10800;partial=true KV808277.1 Protein Homology CDS 28317 29286 . + 0 ID=cds-OFJ86637.1;Parent=gene-HMPREF2844_10800;Dbxref=NCBI_GP:OFJ86637.1;Name=OFJ86637.1;end_range=29286,.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270461.1;locus_tag=HMPREF2844_10800;partial=true;product=hypothetical protein;protein_id=OFJ86637.1;transl_table=11 KV808277.1 Genbank pseudogene 29387 29918 . + . ID=gene-HMPREF2844_10805;Name=HMPREF2844_10805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10805;pseudo=true KV808277.1 GeneMarkS+ CDS 29387 29918 . + 1 ID=cds-HMPREF2844_10805;Parent=gene-HMPREF2844_10805;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10805;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808278.1 1 227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808278.1 Genbank region 1 227 . + . ID=KV808278.1:1..227;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808278.1 Genbank pseudogene 1 227 . + . ID=gene-HMPREF2844_10810;Name=HMPREF2844_10810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10810;pseudo=true KV808278.1 GeneMarkS+ CDS 1 227 . + 1 ID=cds-HMPREF2844_10810;Parent=gene-HMPREF2844_10810;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10810;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV808279.1 1 348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808279.1 Genbank region 1 348 . + . ID=KV808279.1:1..348;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808279.1 Genbank pseudogene 1 348 . + . ID=gene-HMPREF2844_10815;Name=HMPREF2844_10815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10815;pseudo=true KV808279.1 Protein Homology CDS 1 348 . + 0 ID=cds-HMPREF2844_10815;Parent=gene-HMPREF2844_10815;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003743373.1;locus_tag=HMPREF2844_10815;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV808280.1 1 3281 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808280.1 Genbank region 1 3281 . + . ID=KV808280.1:1..3281;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808280.1 Genbank gene 324 400 . - . ID=gene-HMPREF2844_10820;Name=HMPREF2844_10820;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_10820 KV808280.1 tRNAscan-SE tRNA 324 400 . - . ID=rna-HMPREF2844_10820;Parent=gene-HMPREF2844_10820;anticodon=(pos:complement(364..366));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10820;product=tRNA-Asp KV808280.1 tRNAscan-SE exon 324 400 . - . ID=exon-HMPREF2844_10820-1;Parent=rna-HMPREF2844_10820;anticodon=(pos:complement(364..366));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10820;product=tRNA-Asp KV808280.1 Genbank gene 433 508 . - . ID=gene-HMPREF2844_10825;Name=HMPREF2844_10825;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_10825 KV808280.1 tRNAscan-SE tRNA 433 508 . - . ID=rna-HMPREF2844_10825;Parent=gene-HMPREF2844_10825;anticodon=(pos:complement(473..475));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10825;product=tRNA-Val KV808280.1 tRNAscan-SE exon 433 508 . - . ID=exon-HMPREF2844_10825-1;Parent=rna-HMPREF2844_10825;anticodon=(pos:complement(473..475));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10825;product=tRNA-Val KV808280.1 Genbank gene 548 624 . - . ID=gene-HMPREF2844_10830;Name=HMPREF2844_10830;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_10830 KV808280.1 tRNAscan-SE tRNA 548 624 . - . ID=rna-HMPREF2844_10830;Parent=gene-HMPREF2844_10830;anticodon=(pos:complement(588..590));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10830;product=tRNA-Asp KV808280.1 tRNAscan-SE exon 548 624 . - . ID=exon-HMPREF2844_10830-1;Parent=rna-HMPREF2844_10830;anticodon=(pos:complement(588..590));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10830;product=tRNA-Asp KV808280.1 Genbank gene 657 732 . - . ID=gene-HMPREF2844_10835;Name=HMPREF2844_10835;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_10835 KV808280.1 tRNAscan-SE tRNA 657 732 . - . ID=rna-HMPREF2844_10835;Parent=gene-HMPREF2844_10835;anticodon=(pos:complement(697..699));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10835;product=tRNA-Val KV808280.1 tRNAscan-SE exon 657 732 . - . ID=exon-HMPREF2844_10835-1;Parent=rna-HMPREF2844_10835;anticodon=(pos:complement(697..699));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_10835;product=tRNA-Val KV808280.1 Genbank gene 805 2793 . - . ID=gene-HMPREF2844_10840;Name=HMPREF2844_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10840 KV808280.1 Protein Homology CDS 805 2793 . - 0 ID=cds-OFJ86269.1;Parent=gene-HMPREF2844_10840;Dbxref=NCBI_GP:OFJ86269.1;Name=OFJ86269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019269928.1;locus_tag=HMPREF2844_10840;product=potassium transporter;protein_id=OFJ86269.1;transl_table=11 ##sequence-region KV808281.1 1 83547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739348 KV808281.1 Genbank region 1 83547 . + . ID=KV808281.1:1..83547;Dbxref=HMP:2844,taxon:1739348;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC072F04 KV808281.1 Genbank gene 160 987 . - . ID=gene-HMPREF2844_10845;Name=HMPREF2844_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10845 KV808281.1 Protein Homology CDS 160 987 . - 0 ID=cds-OFJ86118.1;Parent=gene-HMPREF2844_10845;Dbxref=NCBI_GP:OFJ86118.1;Name=OFJ86118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687540.1;locus_tag=HMPREF2844_10845;product=d-alanine-poly(phosphoribitol) ligase;protein_id=OFJ86118.1;transl_table=11 KV808281.1 Genbank gene 1099 1401 . - . ID=gene-HMPREF2844_10850;Name=HMPREF2844_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10850 KV808281.1 Protein Homology CDS 1099 1401 . - 0 ID=cds-OFJ86119.1;Parent=gene-HMPREF2844_10850;Dbxref=NCBI_GP:OFJ86119.1;Name=OFJ86119.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778493.1;locus_tag=HMPREF2844_10850;product=[Fe-S]-binding protein;protein_id=OFJ86119.1;transl_table=11 KV808281.1 Genbank gene 1521 2675 . - . ID=gene-HMPREF2844_10855;Name=HMPREF2844_10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10855 KV808281.1 Protein Homology CDS 1521 2675 . - 0 ID=cds-OFJ86120.1;Parent=gene-HMPREF2844_10855;Dbxref=NCBI_GP:OFJ86120.1;Name=OFJ86120.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009427513.1;locus_tag=HMPREF2844_10855;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=OFJ86120.1;transl_table=11 KV808281.1 Genbank gene 2781 3650 . - . ID=gene-HMPREF2844_10860;Name=HMPREF2844_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10860 KV808281.1 GeneMarkS+ CDS 2781 3650 . - 0 ID=cds-OFJ86121.1;Parent=gene-HMPREF2844_10860;Dbxref=NCBI_GP:OFJ86121.1;Name=OFJ86121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10860;product=hypothetical protein;protein_id=OFJ86121.1;transl_table=11 KV808281.1 Genbank gene 3732 6011 . - . ID=gene-HMPREF2844_10865;Name=HMPREF2844_10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10865 KV808281.1 Protein Homology CDS 3732 6011 . - 0 ID=cds-OFJ86122.1;Parent=gene-HMPREF2844_10865;Dbxref=NCBI_GP:OFJ86122.1;Name=OFJ86122.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756856.1;locus_tag=HMPREF2844_10865;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=OFJ86122.1;transl_table=11 KV808281.1 Genbank gene 6369 6875 . - . ID=gene-HMPREF2844_10870;Name=HMPREF2844_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10870 KV808281.1 Protein Homology CDS 6369 6875 . - 0 ID=cds-OFJ86123.1;Parent=gene-HMPREF2844_10870;Dbxref=NCBI_GP:OFJ86123.1;Name=OFJ86123.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687544.1;locus_tag=HMPREF2844_10870;product=Fe-S protein assembly co-chaperone HscB;protein_id=OFJ86123.1;transl_table=11 KV808281.1 Genbank gene 7139 7459 . - . ID=gene-HMPREF2844_10875;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=HMPREF2844_10875 KV808281.1 Protein Homology CDS 7139 7459 . - 0 ID=cds-OFJ86124.1;Parent=gene-HMPREF2844_10875;Dbxref=NCBI_GP:OFJ86124.1;Name=OFJ86124.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002932457.1;locus_tag=HMPREF2844_10875;product=iron-sulfur cluster assembly protein IscA;protein_id=OFJ86124.1;transl_table=11 KV808281.1 Genbank gene 7528 7773 . - . ID=gene-HMPREF2844_10880;Name=HMPREF2844_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10880 KV808281.1 Protein Homology CDS 7528 7773 . - 0 ID=cds-OFJ86125.1;Parent=gene-HMPREF2844_10880;Dbxref=NCBI_GP:OFJ86125.1;Name=OFJ86125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271259.1;locus_tag=HMPREF2844_10880;product=recombinase RecA;protein_id=OFJ86125.1;transl_table=11 KV808281.1 Genbank gene 8041 8427 . - . ID=gene-HMPREF2844_10885;Name=HMPREF2844_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10885 KV808281.1 Protein Homology CDS 8041 8427 . - 0 ID=cds-OFJ86126.1;Parent=gene-HMPREF2844_10885;Dbxref=NCBI_GP:OFJ86126.1;Name=OFJ86126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674559.1;locus_tag=HMPREF2844_10885;product=scaffolding protein;protein_id=OFJ86126.1;transl_table=11 KV808281.1 Genbank gene 9195 10409 . - . ID=gene-HMPREF2844_10890;Name=HMPREF2844_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10890 KV808281.1 Protein Homology CDS 9195 10409 . - 0 ID=cds-OFJ86127.1;Parent=gene-HMPREF2844_10890;Dbxref=NCBI_GP:OFJ86127.1;Name=OFJ86127.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687546.1;locus_tag=HMPREF2844_10890;product=cysteine desulfurase IscS;protein_id=OFJ86127.1;transl_table=11 KV808281.1 Genbank gene 10439 10885 . - . ID=gene-HMPREF2844_10895;Name=HMPREF2844_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10895 KV808281.1 Protein Homology CDS 10439 10885 . - 0 ID=cds-OFJ86128.1;Parent=gene-HMPREF2844_10895;Dbxref=NCBI_GP:OFJ86128.1;Name=OFJ86128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519894.1;locus_tag=HMPREF2844_10895;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=OFJ86128.1;transl_table=11 KV808281.1 Genbank gene 11242 12414 . + . ID=gene-HMPREF2844_10900;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=HMPREF2844_10900 KV808281.1 Protein Homology CDS 11242 12414 . + 0 ID=cds-OFJ86129.1;Parent=gene-HMPREF2844_10900;Dbxref=NCBI_GP:OFJ86129.1;Name=OFJ86129.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779169.1;locus_tag=HMPREF2844_10900;product=alpha-hydroxy-acid oxidizing enzyme;protein_id=OFJ86129.1;transl_table=11 KV808281.1 Genbank gene 12543 13325 . - . ID=gene-HMPREF2844_10905;Name=HMPREF2844_10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10905 KV808281.1 Protein Homology CDS 12543 13325 . - 0 ID=cds-OFJ86143.1;Parent=gene-HMPREF2844_10905;Dbxref=NCBI_GP:OFJ86143.1;Name=OFJ86143.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003764477.1;locus_tag=HMPREF2844_10905;product=RNA methyltransferase;protein_id=OFJ86143.1;transl_table=11 KV808281.1 Genbank gene 13515 14063 . - . ID=gene-HMPREF2844_10910;Name=HMPREF2844_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10910 KV808281.1 Protein Homology CDS 13515 14063 . - 0 ID=cds-OFJ86144.1;Parent=gene-HMPREF2844_10910;Dbxref=NCBI_GP:OFJ86144.1;Name=OFJ86144.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003758514.1;locus_tag=HMPREF2844_10910;product=anti-sigma factor;protein_id=OFJ86144.1;transl_table=11 KV808281.1 Genbank gene 14110 14709 . - . ID=gene-HMPREF2844_10915;Name=HMPREF2844_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10915 KV808281.1 Protein Homology CDS 14110 14709 . - 0 ID=cds-OFJ86130.1;Parent=gene-HMPREF2844_10915;Dbxref=NCBI_GP:OFJ86130.1;Name=OFJ86130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008953842.1;locus_tag=HMPREF2844_10915;product=RNA polymerase sigma factor RpoE;protein_id=OFJ86130.1;transl_table=11 KV808281.1 Genbank gene 14793 16136 . - . ID=gene-HMPREF2844_10920;Name=HMPREF2844_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10920 KV808281.1 Protein Homology CDS 14793 16136 . - 0 ID=cds-OFJ86131.1;Parent=gene-HMPREF2844_10920;Dbxref=NCBI_GP:OFJ86131.1;Name=OFJ86131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311353.1;locus_tag=HMPREF2844_10920;product=tRNA(Ile)-lysidine synthetase;protein_id=OFJ86131.1;transl_table=11 KV808281.1 Genbank gene 16228 17187 . - . ID=gene-HMPREF2844_10925;Name=HMPREF2844_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10925 KV808281.1 Protein Homology CDS 16228 17187 . - 0 ID=cds-OFJ86132.1;Parent=gene-HMPREF2844_10925;Dbxref=NCBI_GP:OFJ86132.1;Name=OFJ86132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007343070.1;locus_tag=HMPREF2844_10925;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=OFJ86132.1;transl_table=11 KV808281.1 Genbank gene 17404 17805 . + . ID=gene-HMPREF2844_10930;Name=HMPREF2844_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10930 KV808281.1 Protein Homology CDS 17404 17805 . + 0 ID=cds-OFJ86133.1;Parent=gene-HMPREF2844_10930;Dbxref=NCBI_GP:OFJ86133.1;Name=OFJ86133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311355.1;locus_tag=HMPREF2844_10930;product=RNA-binding protein;protein_id=OFJ86133.1;transl_table=11 KV808281.1 Genbank gene 17954 19072 . - . ID=gene-HMPREF2844_10935;Name=HMPREF2844_10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10935 KV808281.1 Protein Homology CDS 17954 19072 . - 0 ID=cds-OFJ86134.1;Parent=gene-HMPREF2844_10935;Dbxref=NCBI_GP:OFJ86134.1;Name=OFJ86134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003778773.1;locus_tag=HMPREF2844_10935;product=hypothetical protein;protein_id=OFJ86134.1;transl_table=11 KV808281.1 Genbank gene 19317 21074 . - . ID=gene-HMPREF2844_10940;Name=HMPREF2844_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10940 KV808281.1 Protein Homology CDS 19317 21074 . - 0 ID=cds-OFJ86135.1;Parent=gene-HMPREF2844_10940;Dbxref=NCBI_GP:OFJ86135.1;Name=OFJ86135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003768239.1;locus_tag=HMPREF2844_10940;product=exodeoxyribonuclease V subunit alpha;protein_id=OFJ86135.1;transl_table=11 KV808281.1 Genbank gene 21289 22134 . + . ID=gene-HMPREF2844_10945;Name=HMPREF2844_10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10945 KV808281.1 Protein Homology CDS 21289 22134 . + 0 ID=cds-OFJ86136.1;Parent=gene-HMPREF2844_10945;Dbxref=NCBI_GP:OFJ86136.1;Name=OFJ86136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221597.1;locus_tag=HMPREF2844_10945;product=competence protein ComJ;protein_id=OFJ86136.1;transl_table=11 KV808281.1 Genbank gene 22229 23287 . + . ID=gene-HMPREF2844_10950;Name=HMPREF2844_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10950 KV808281.1 Protein Homology CDS 22229 23287 . + 0 ID=cds-OFJ86137.1;Parent=gene-HMPREF2844_10950;Dbxref=NCBI_GP:OFJ86137.1;Name=OFJ86137.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685309.1;locus_tag=HMPREF2844_10950;product=DNA polymerase IV;protein_id=OFJ86137.1;transl_table=11 KV808281.1 Genbank gene 23419 24150 . + . ID=gene-HMPREF2844_10955;Name=HMPREF2844_10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10955 KV808281.1 Protein Homology CDS 23419 24150 . + 0 ID=cds-OFJ86138.1;Parent=gene-HMPREF2844_10955;Dbxref=NCBI_GP:OFJ86138.1;Name=OFJ86138.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003742320.1;locus_tag=HMPREF2844_10955;product=phosphoadenosine phosphosulfate reductase;protein_id=OFJ86138.1;transl_table=11 KV808281.1 Genbank gene 24468 25226 . + . ID=gene-HMPREF2844_10960;Name=HMPREF2844_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10960 KV808281.1 Protein Homology CDS 24468 25226 . + 0 ID=cds-OFJ86139.1;Parent=gene-HMPREF2844_10960;Dbxref=NCBI_GP:OFJ86139.1;Name=OFJ86139.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009311260.1;locus_tag=HMPREF2844_10960;product=carbonate dehydratase;protein_id=OFJ86139.1;transl_table=11 KV808281.1 Genbank gene 25372 26286 . - . ID=gene-HMPREF2844_10965;Name=HMPREF2844_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10965 KV808281.1 Protein Homology CDS 25372 26286 . - 0 ID=cds-OFJ86140.1;Parent=gene-HMPREF2844_10965;Dbxref=NCBI_GP:OFJ86140.1;Name=OFJ86140.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018574957.1;locus_tag=HMPREF2844_10965;product=sulfate adenylyltransferase small subunit;protein_id=OFJ86140.1;transl_table=11 KV808281.1 Genbank gene 26558 27973 . + . ID=gene-HMPREF2844_10970;Name=HMPREF2844_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10970 KV808281.1 Protein Homology CDS 26558 27973 . + 0 ID=cds-OFJ86141.1;Parent=gene-HMPREF2844_10970;Dbxref=NCBI_GP:OFJ86141.1;Name=OFJ86141.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271242.1;locus_tag=HMPREF2844_10970;product=sirohydrochlorin ferrochelatase;protein_id=OFJ86141.1;transl_table=11 KV808281.1 Genbank gene 28057 28275 . - . ID=gene-HMPREF2844_10975;Name=HMPREF2844_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10975 KV808281.1 Protein Homology CDS 28057 28275 . - 0 ID=cds-OFJ86142.1;Parent=gene-HMPREF2844_10975;Dbxref=NCBI_GP:OFJ86142.1;Name=OFJ86142.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002234845.1;locus_tag=HMPREF2844_10975;product=hypothetical protein;protein_id=OFJ86142.1;transl_table=11 KV808281.1 Genbank direct_repeat 29190 29483 . + . ID=id-KV808281.1:29190..29483;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..28;rpt_unit_seq=ttcaacacacagccgcctgaaggcggct KV808281.1 Genbank direct_repeat 29585 29948 . + . ID=id-KV808281.1:29585..29948;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..29;rpt_unit_seq=gtttcaacacacagccgcctgaaggcggc KV808281.1 Genbank direct_repeat 30050 30543 . + . ID=id-KV808281.1:30050..30543;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..28;rpt_unit_seq=tttcaacacacagccgcctgaaggcggc KV808281.1 Genbank gene 30679 30861 . + . ID=gene-HMPREF2844_10980;Name=HMPREF2844_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10980 KV808281.1 GeneMarkS+ CDS 30679 30861 . + 0 ID=cds-OFJ84949.1;Parent=gene-HMPREF2844_10980;Dbxref=NCBI_GP:OFJ84949.1;Name=OFJ84949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10980;product=hypothetical protein;protein_id=OFJ84949.1;transl_table=11 KV808281.1 Genbank direct_repeat 30971 31463 . + . ID=id-KV808281.1:30971..31463;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..29;rpt_unit_seq=ttcaacacacagccgcctgaaggcggctg KV808281.1 Genbank direct_repeat 31565 31925 . + . ID=id-KV808281.1:31565..31925;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..28;rpt_unit_seq=tttcaacacacagccgcctgaaggcggc KV808281.1 Genbank direct_repeat 32354 32643 . + . ID=id-KV808281.1:32354..32643;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..27;rpt_unit_seq=tcaacacacagccgcctgaaggcggct KV808281.1 Genbank pseudogene 33075 33298 . + . ID=gene-HMPREF2844_10985;Name=HMPREF2844_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10985;pseudo=true KV808281.1 GeneMarkS+ CDS 33075 33298 . + 2 ID=cds-HMPREF2844_10985;Parent=gene-HMPREF2844_10985;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10985;product=hypothetical protein;pseudo=true;transl_table=11 KV808281.1 Genbank pseudogene 33407 33634 . + . ID=gene-HMPREF2844_10990;Name=HMPREF2844_10990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_10990;pseudo=true KV808281.1 GeneMarkS+ CDS 33407 33634 . + 2 ID=cds-HMPREF2844_10990;Parent=gene-HMPREF2844_10990;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_10990;product=hypothetical protein;pseudo=true;transl_table=11 KV808281.1 Genbank direct_repeat 33735 34028 . + . ID=id-KV808281.1:33735..34028;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..30;rpt_unit_seq=tttcaacacacagccgcctgaaggcggctg KV808281.1 Genbank direct_repeat 35115 35608 . + . ID=id-KV808281.1:35115..35608;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..29;rpt_unit_seq=ttcaacacacagccgcctgaaggcggctg KV808281.1 Genbank direct_repeat 35710 36001 . + . ID=id-KV808281.1:35710..36001;gbkey=repeat_region;inference=COORDINATES: alignment:crt:1.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=1..26;rpt_unit_seq=ttcaacacacagccgcctgaaggcgg KV808281.1 Genbank gene 36653 36946 . - . ID=gene-HMPREF2844_10995;Name=HMPREF2844_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_10995 KV808281.1 Protein Homology CDS 36653 36946 . - 0 ID=cds-OFJ85192.1;Parent=gene-HMPREF2844_10995;Dbxref=NCBI_GP:OFJ85192.1;Name=OFJ85192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271087.1;locus_tag=HMPREF2844_10995;product=CRISPR-associated endonuclease Cas2;protein_id=OFJ85192.1;transl_table=11 KV808281.1 Genbank gene 37021 38034 . - . ID=gene-HMPREF2844_11000;Name=HMPREF2844_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11000 KV808281.1 Protein Homology CDS 37021 38034 . - 0 ID=cds-OFJ85193.1;Parent=gene-HMPREF2844_11000;Dbxref=NCBI_GP:OFJ85193.1;Name=OFJ85193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003762781.1;locus_tag=HMPREF2844_11000;product=subtype I-C CRISPR-associated endonuclease Cas1;protein_id=OFJ85193.1;transl_table=11 KV808281.1 Genbank gene 38284 39030 . - . ID=gene-HMPREF2844_11005;Name=HMPREF2844_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11005 KV808281.1 Protein Homology CDS 38284 39030 . - 0 ID=cds-OFJ85209.1;Parent=gene-HMPREF2844_11005;Dbxref=NCBI_GP:OFJ85209.1;Name=OFJ85209.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012695875.1;locus_tag=HMPREF2844_11005;product=hypothetical protein;protein_id=OFJ85209.1;transl_table=11 KV808281.1 Genbank gene 39104 39754 . - . ID=gene-HMPREF2844_11010;Name=HMPREF2844_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11010 KV808281.1 Protein Homology CDS 39104 39754 . - 0 ID=cds-OFJ85194.1;Parent=gene-HMPREF2844_11010;Dbxref=NCBI_GP:OFJ85194.1;Name=OFJ85194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524822.1;locus_tag=HMPREF2844_11010;product=CRISPR-associated protein Cas4;protein_id=OFJ85194.1;transl_table=11 KV808281.1 Genbank gene 39776 40684 . - . ID=gene-HMPREF2844_11015;Name=HMPREF2844_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11015 KV808281.1 Protein Homology CDS 39776 40684 . - 0 ID=cds-OFJ85195.1;Parent=gene-HMPREF2844_11015;Dbxref=NCBI_GP:OFJ85195.1;Name=OFJ85195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540837.1;locus_tag=HMPREF2844_11015;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=OFJ85195.1;transl_table=11 KV808281.1 Genbank gene 40706 42769 . - . ID=gene-HMPREF2844_11020;Name=HMPREF2844_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11020 KV808281.1 Protein Homology CDS 40706 42769 . - 0 ID=cds-OFJ85196.1;Parent=gene-HMPREF2844_11020;Dbxref=NCBI_GP:OFJ85196.1;Name=OFJ85196.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524562.1;locus_tag=HMPREF2844_11020;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=OFJ85196.1;transl_table=11 KV808281.1 Genbank gene 42766 43488 . - . ID=gene-HMPREF2844_11025;Name=HMPREF2844_11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11025 KV808281.1 Protein Homology CDS 42766 43488 . - 0 ID=cds-OFJ85197.1;Parent=gene-HMPREF2844_11025;Dbxref=NCBI_GP:OFJ85197.1;Name=OFJ85197.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635203.1;locus_tag=HMPREF2844_11025;product=type I-C CRISPR-associated protein Cas5;protein_id=OFJ85197.1;transl_table=11 KV808281.1 Genbank gene 43496 46078 . - . ID=gene-HMPREF2844_11030;Name=HMPREF2844_11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11030 KV808281.1 Protein Homology CDS 43496 46078 . - 0 ID=cds-OFJ85198.1;Parent=gene-HMPREF2844_11030;Dbxref=NCBI_GP:OFJ85198.1;Name=OFJ85198.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005565160.1;locus_tag=HMPREF2844_11030;product=CRISPR-associated helicase/endonuclease Cas3;protein_id=OFJ85198.1;transl_table=11 KV808281.1 Genbank gene 46511 46720 . + . ID=gene-HMPREF2844_11035;Name=HMPREF2844_11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11035 KV808281.1 Protein Homology CDS 46511 46720 . + 0 ID=cds-OFJ85199.1;Parent=gene-HMPREF2844_11035;Dbxref=NCBI_GP:OFJ85199.1;Name=OFJ85199.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003674677.1;locus_tag=HMPREF2844_11035;product=hypothetical protein;protein_id=OFJ85199.1;transl_table=11 KV808281.1 Genbank gene 46797 48326 . + . ID=gene-HMPREF2844_11040;Name=HMPREF2844_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11040 KV808281.1 Protein Homology CDS 46797 48326 . + 0 ID=cds-OFJ85210.1;Parent=gene-HMPREF2844_11040;Dbxref=NCBI_GP:OFJ85210.1;Name=OFJ85210.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779211.1;locus_tag=HMPREF2844_11040;product=glycine/betaine ABC transporter permease;protein_id=OFJ85210.1;transl_table=11 KV808281.1 Genbank gene 48455 48703 . + . ID=gene-HMPREF2844_11045;Name=HMPREF2844_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11045 KV808281.1 Protein Homology CDS 48455 48703 . + 0 ID=cds-OFJ85200.1;Parent=gene-HMPREF2844_11045;Dbxref=NCBI_GP:OFJ85200.1;Name=OFJ85200.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312114.1;locus_tag=HMPREF2844_11045;product=CsbD-like protein;protein_id=OFJ85200.1;transl_table=11 KV808281.1 Genbank gene 49029 49715 . + . ID=gene-HMPREF2844_11050;Name=HMPREF2844_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11050 KV808281.1 Protein Homology CDS 49029 49715 . + 0 ID=cds-OFJ85201.1;Parent=gene-HMPREF2844_11050;Dbxref=NCBI_GP:OFJ85201.1;Name=OFJ85201.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004139031.1;locus_tag=HMPREF2844_11050;product=SAM-dependent methyltransferase;protein_id=OFJ85201.1;transl_table=11 KV808281.1 Genbank gene 49975 50808 . + . ID=gene-HMPREF2844_11055;Name=HMPREF2844_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11055 KV808281.1 Protein Homology CDS 49975 50808 . + 0 ID=cds-OFJ85211.1;Parent=gene-HMPREF2844_11055;Dbxref=NCBI_GP:OFJ85211.1;Name=OFJ85211.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003761989.1;locus_tag=HMPREF2844_11055;product=cysteine methyltransferase;protein_id=OFJ85211.1;transl_table=11 KV808281.1 Genbank gene 50798 51424 . + . ID=gene-HMPREF2844_11060;Name=HMPREF2844_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11060 KV808281.1 Protein Homology CDS 50798 51424 . + 0 ID=cds-OFJ85202.1;Parent=gene-HMPREF2844_11060;Dbxref=NCBI_GP:OFJ85202.1;Name=OFJ85202.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003824795.1;locus_tag=HMPREF2844_11060;product=2OG-Fe(II) oxygenase;protein_id=OFJ85202.1;transl_table=11 KV808281.1 Genbank gene 51492 51857 . + . ID=gene-HMPREF2844_11065;Name=HMPREF2844_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11065 KV808281.1 Protein Homology CDS 51492 51857 . + 0 ID=cds-OFJ85203.1;Parent=gene-HMPREF2844_11065;Dbxref=NCBI_GP:OFJ85203.1;Name=OFJ85203.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003784202.1;locus_tag=HMPREF2844_11065;product=hypothetical protein;protein_id=OFJ85203.1;transl_table=11 KV808281.1 Genbank gene 51941 52609 . + . ID=gene-HMPREF2844_11070;Name=HMPREF2844_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11070 KV808281.1 Protein Homology CDS 51941 52609 . + 0 ID=cds-OFJ85204.1;Parent=gene-HMPREF2844_11070;Dbxref=NCBI_GP:OFJ85204.1;Name=OFJ85204.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173625.1;locus_tag=HMPREF2844_11070;product=DNA alkylation repair protein;protein_id=OFJ85204.1;transl_table=11 KV808281.1 Genbank gene 52771 53712 . + . ID=gene-HMPREF2844_11075;Name=HMPREF2844_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11075 KV808281.1 Protein Homology CDS 52771 53712 . + 0 ID=cds-OFJ85205.1;Parent=gene-HMPREF2844_11075;Dbxref=NCBI_GP:OFJ85205.1;Name=OFJ85205.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003757761.1;locus_tag=HMPREF2844_11075;product=potassium-tellurite ethidium and proflavin transporter;protein_id=OFJ85205.1;transl_table=11 KV808281.1 Genbank gene 53861 54193 . - . ID=gene-HMPREF2844_11080;Name=HMPREF2844_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11080 KV808281.1 Protein Homology CDS 53861 54193 . - 0 ID=cds-OFJ85212.1;Parent=gene-HMPREF2844_11080;Dbxref=NCBI_GP:OFJ85212.1;Name=OFJ85212.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011218498.1;locus_tag=HMPREF2844_11080;product=hypothetical protein;protein_id=OFJ85212.1;transl_table=11 KV808281.1 Genbank pseudogene 54327 54578 . + . ID=gene-HMPREF2844_11085;Name=HMPREF2844_11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_11085;pseudo=true KV808281.1 Protein Homology CDS 54327 54578 . + 0 ID=cds-HMPREF2844_11085;Parent=gene-HMPREF2844_11085;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752402.1;locus_tag=HMPREF2844_11085;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 KV808281.1 Genbank pseudogene 54844 56133 . + . ID=gene-HMPREF2844_11090;Name=HMPREF2844_11090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2844_11090;pseudo=true KV808281.1 Protein Homology CDS 54844 56133 . + 0 ID=cds-HMPREF2844_11090;Parent=gene-HMPREF2844_11090;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312121.1;locus_tag=HMPREF2844_11090;product=ferric reductase;pseudo=true;transl_table=11 KV808281.1 Genbank gene 56345 57208 . + . ID=gene-HMPREF2844_11095;Name=HMPREF2844_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11095 KV808281.1 Protein Homology CDS 56345 57208 . + 0 ID=cds-OFJ85206.1;Parent=gene-HMPREF2844_11095;Dbxref=NCBI_GP:OFJ85206.1;Name=OFJ85206.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009312122.1;locus_tag=HMPREF2844_11095;product=NAD(P)-dependent oxidoreductase;protein_id=OFJ85206.1;transl_table=11 KV808281.1 Genbank gene 57198 58043 . + . ID=gene-HMPREF2844_11100;Name=HMPREF2844_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11100 KV808281.1 Protein Homology CDS 57198 58043 . + 0 ID=cds-OFJ85207.1;Parent=gene-HMPREF2844_11100;Dbxref=NCBI_GP:OFJ85207.1;Name=OFJ85207.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006984047.1;locus_tag=HMPREF2844_11100;product=proline/glycine betaine ABC transporter ATP-binding protein;protein_id=OFJ85207.1;transl_table=11 KV808281.1 Genbank gene 58384 59703 . + . ID=gene-HMPREF2844_11105;Name=HMPREF2844_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11105 KV808281.1 Protein Homology CDS 58384 59703 . + 0 ID=cds-OFJ85208.1;Parent=gene-HMPREF2844_11105;Dbxref=NCBI_GP:OFJ85208.1;Name=OFJ85208.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016686729.1;locus_tag=HMPREF2844_11105;product=MFS transporter;protein_id=OFJ85208.1;transl_table=11 KV808281.1 Genbank gene 60580 60652 . + . ID=gene-HMPREF2844_11110;Name=HMPREF2844_11110;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_11110 KV808281.1 tRNAscan-SE tRNA 60580 60652 . + . ID=rna-HMPREF2844_11110;Parent=gene-HMPREF2844_11110;anticodon=(pos:60613..60615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_11110;product=tRNA-Glu KV808281.1 tRNAscan-SE exon 60580 60652 . + . ID=exon-HMPREF2844_11110-1;Parent=rna-HMPREF2844_11110;anticodon=(pos:60613..60615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_11110;product=tRNA-Glu KV808281.1 Genbank gene 60655 60730 . + . ID=gene-HMPREF2844_11115;Name=HMPREF2844_11115;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2844_11115 KV808281.1 tRNAscan-SE tRNA 60655 60730 . + . ID=rna-HMPREF2844_11115;Parent=gene-HMPREF2844_11115;anticodon=(pos:60688..60690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_11115;product=tRNA-Met KV808281.1 tRNAscan-SE exon 60655 60730 . + . ID=exon-HMPREF2844_11115-1;Parent=rna-HMPREF2844_11115;anticodon=(pos:60688..60690);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2844_11115;product=tRNA-Met KV808281.1 Genbank gene 61199 63184 . + . ID=gene-HMPREF2844_11120;Name=HMPREF2844_11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11120 KV808281.1 Protein Homology CDS 61199 63184 . + 0 ID=cds-OFJ85117.1;Parent=gene-HMPREF2844_11120;Dbxref=NCBI_GP:OFJ85117.1;Name=OFJ85117.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003756666.1;locus_tag=HMPREF2844_11120;product=hypothetical protein;protein_id=OFJ85117.1;transl_table=11 KV808281.1 Genbank gene 63383 63931 . - . ID=gene-HMPREF2844_11125;Name=HMPREF2844_11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11125 KV808281.1 Protein Homology CDS 63383 63931 . - 0 ID=cds-OFJ85118.1;Parent=gene-HMPREF2844_11125;Dbxref=NCBI_GP:OFJ85118.1;Name=OFJ85118.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003752570.1;locus_tag=HMPREF2844_11125;product=hypothetical protein;protein_id=OFJ85118.1;transl_table=11 KV808281.1 Genbank gene 64192 64827 . - . ID=gene-HMPREF2844_11130;Name=HMPREF2844_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11130 KV808281.1 GeneMarkS+ CDS 64192 64827 . - 0 ID=cds-OFJ85119.1;Parent=gene-HMPREF2844_11130;Dbxref=NCBI_GP:OFJ85119.1;Name=OFJ85119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_11130;product=hypothetical protein;protein_id=OFJ85119.1;transl_table=11 KV808281.1 Genbank gene 64842 65594 . - . ID=gene-HMPREF2844_11135;Name=HMPREF2844_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11135 KV808281.1 GeneMarkS+ CDS 64842 65594 . - 0 ID=cds-OFJ85120.1;Parent=gene-HMPREF2844_11135;Dbxref=NCBI_GP:OFJ85120.1;Name=OFJ85120.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_11135;product=hypothetical protein;protein_id=OFJ85120.1;transl_table=11 KV808281.1 Genbank gene 65609 67636 . - . ID=gene-HMPREF2844_11140;Name=HMPREF2844_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11140 KV808281.1 Protein Homology CDS 65609 67636 . - 0 ID=cds-OFJ85121.1;Parent=gene-HMPREF2844_11140;Dbxref=NCBI_GP:OFJ85121.1;Name=OFJ85121.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004520928.1;locus_tag=HMPREF2844_11140;product=excinuclease ABC subunit B;protein_id=OFJ85121.1;transl_table=11 KV808281.1 Genbank gene 67734 68066 . - . ID=gene-HMPREF2844_11145;Name=HMPREF2844_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11145 KV808281.1 Protein Homology CDS 67734 68066 . - 0 ID=cds-OFJ85122.1;Parent=gene-HMPREF2844_11145;Dbxref=NCBI_GP:OFJ85122.1;Name=OFJ85122.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013106122.1;locus_tag=HMPREF2844_11145;product=thiol reductase thioredoxin;protein_id=OFJ85122.1;transl_table=11 KV808281.1 Genbank gene 68217 69764 . - . ID=gene-HMPREF2844_11150;Name=HMPREF2844_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11150 KV808281.1 Protein Homology CDS 68217 69764 . - 0 ID=cds-OFJ85123.1;Parent=gene-HMPREF2844_11150;Dbxref=NCBI_GP:OFJ85123.1;Name=OFJ85123.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003746052.1;locus_tag=HMPREF2844_11150;product=microcin ABC transporter ATP-binding protein;protein_id=OFJ85123.1;transl_table=11 KV808281.1 Genbank gene 69761 70471 . - . ID=gene-HMPREF2844_11155;Name=HMPREF2844_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11155 KV808281.1 GeneMarkS+ CDS 69761 70471 . - 0 ID=cds-OFJ85124.1;Parent=gene-HMPREF2844_11155;Dbxref=NCBI_GP:OFJ85124.1;Name=OFJ85124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2844_11155;product=hypothetical protein;protein_id=OFJ85124.1;transl_table=11 KV808281.1 Genbank gene 70580 72121 . - . ID=gene-HMPREF2844_11160;Name=HMPREF2844_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11160 KV808281.1 Protein Homology CDS 70580 72121 . - 0 ID=cds-OFJ85125.1;Parent=gene-HMPREF2844_11160;Dbxref=NCBI_GP:OFJ85125.1;Name=OFJ85125.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271475.1;locus_tag=HMPREF2844_11160;product=long-chain fatty acid--CoA ligase;protein_id=OFJ85125.1;transl_table=11 KV808281.1 Genbank gene 72229 73275 . - . ID=gene-HMPREF2844_11165;Name=HMPREF2844_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11165 KV808281.1 Protein Homology CDS 72229 73275 . - 0 ID=cds-OFJ85126.1;Parent=gene-HMPREF2844_11165;Dbxref=NCBI_GP:OFJ85126.1;Name=OFJ85126.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019271476.1;locus_tag=HMPREF2844_11165;product=peptide ABC transporter permease;protein_id=OFJ85126.1;transl_table=11 KV808281.1 Genbank gene 73303 74355 . - . ID=gene-HMPREF2844_11170;Name=HMPREF2844_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11170 KV808281.1 Protein Homology CDS 73303 74355 . - 0 ID=cds-OFJ85127.1;Parent=gene-HMPREF2844_11170;Dbxref=NCBI_GP:OFJ85127.1;Name=OFJ85127.1;Note=with YejAEF is involved in resistance to microcin C;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009173107.1;locus_tag=HMPREF2844_11170;product=microcin ABC transporter permease;protein_id=OFJ85127.1;transl_table=11 KV808281.1 Genbank gene 74447 75097 . - . ID=gene-HMPREF2844_11175;Name=HMPREF2844_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11175 KV808281.1 Protein Homology CDS 74447 75097 . - 0 ID=cds-OFJ85128.1;Parent=gene-HMPREF2844_11175;Dbxref=NCBI_GP:OFJ85128.1;Name=OFJ85128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003779279.1;locus_tag=HMPREF2844_11175;product=DNA repair protein;protein_id=OFJ85128.1;transl_table=11 KV808281.1 Genbank gene 75244 75627 . - . ID=gene-HMPREF2844_11180;Name=HMPREF2844_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11180 KV808281.1 Protein Homology CDS 75244 75627 . - 0 ID=cds-OFJ85129.1;Parent=gene-HMPREF2844_11180;Dbxref=NCBI_GP:OFJ85129.1;Name=OFJ85129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675734.1;locus_tag=HMPREF2844_11180;product=hypothetical protein;protein_id=OFJ85129.1;transl_table=11 KV808281.1 Genbank gene 75778 75972 . - . ID=gene-HMPREF2844_11185;Name=HMPREF2844_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11185 KV808281.1 Protein Homology CDS 75778 75972 . - 0 ID=cds-OFJ85130.1;Parent=gene-HMPREF2844_11185;Dbxref=NCBI_GP:OFJ85130.1;Name=OFJ85130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003740696.1;locus_tag=HMPREF2844_11185;product=hypothetical protein;protein_id=OFJ85130.1;transl_table=11 KV808281.1 Genbank gene 76125 77054 . - . ID=gene-HMPREF2844_11190;Name=HMPREF2844_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11190 KV808281.1 Protein Homology CDS 76125 77054 . - 0 ID=cds-OFJ85131.1;Parent=gene-HMPREF2844_11190;Dbxref=NCBI_GP:OFJ85131.1;Name=OFJ85131.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003744588.1;locus_tag=HMPREF2844_11190;product=cobalamin biosynthesis protein CobW;protein_id=OFJ85131.1;transl_table=11 KV808281.1 Genbank gene 77042 77518 . - . ID=gene-HMPREF2844_11195;Name=HMPREF2844_11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11195 KV808281.1 Protein Homology CDS 77042 77518 . - 0 ID=cds-OFJ85132.1;Parent=gene-HMPREF2844_11195;Dbxref=NCBI_GP:OFJ85132.1;Name=OFJ85132.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002217097.1;locus_tag=HMPREF2844_11195;product=cation uptake regulator;protein_id=OFJ85132.1;transl_table=11 KV808281.1 Genbank gene 77992 79458 . + . ID=gene-HMPREF2844_11200;Name=HMPREF2844_11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11200 KV808281.1 Protein Homology CDS 77992 79458 . + 0 ID=cds-OFJ85133.1;Parent=gene-HMPREF2844_11200;Dbxref=NCBI_GP:OFJ85133.1;Name=OFJ85133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687016.1;locus_tag=HMPREF2844_11200;product=hypothetical protein;protein_id=OFJ85133.1;transl_table=11 KV808281.1 Genbank gene 79774 81075 . - . ID=gene-HMPREF2844_11205;Name=HMPREF2844_11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11205 KV808281.1 Protein Homology CDS 79774 81075 . - 0 ID=cds-OFJ85134.1;Parent=gene-HMPREF2844_11205;Dbxref=NCBI_GP:OFJ85134.1;Name=OFJ85134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687017.1;locus_tag=HMPREF2844_11205;product=hypothetical protein;protein_id=OFJ85134.1;transl_table=11 KV808281.1 Genbank gene 81191 82363 . - . ID=gene-HMPREF2844_11210;Name=HMPREF2844_11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11210 KV808281.1 Protein Homology CDS 81191 82363 . - 0 ID=cds-OFJ85135.1;Parent=gene-HMPREF2844_11210;Dbxref=NCBI_GP:OFJ85135.1;Name=OFJ85135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016687020.1;locus_tag=HMPREF2844_11210;product=hypothetical protein;protein_id=OFJ85135.1;transl_table=11 KV808281.1 Genbank gene 82431 83417 . - . ID=gene-HMPREF2844_11215;Name=HMPREF2844_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2844_11215 KV808281.1 Protein Homology CDS 82431 83417 . - 0 ID=cds-OFJ85136.1;Parent=gene-HMPREF2844_11215;Dbxref=NCBI_GP:OFJ85136.1;Name=OFJ85136.1;Note=catalyzes the oxidation of malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680720.1;locus_tag=HMPREF2844_11215;product=malate dehydrogenase;protein_id=OFJ85136.1;transl_table=11 ###