##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM181405v1 #!genome-build-accession NCBI_Assembly:GCA_001814055.1 #!annotation-date 03/03/2016 07:13:13 #!annotation-source NCBI ##sequence-region KV814705.1 1 98282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814705.1 Genbank region 1 98282 . + . ID=KV814705.1:1..98282;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814705.1 Genbank gene 97 1431 . - . ID=gene-HMPREF2948_00005;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=HMPREF2948_00005 KV814705.1 Protein Homology CDS 97 1431 . - 0 ID=cds-OFQ20866.1;Parent=gene-HMPREF2948_00005;Dbxref=NCBI_GP:OFQ20866.1;Name=OFQ20866.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=HMPREF2948_00005;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=OFQ20866.1;transl_table=11 KV814705.1 Genbank gene 1441 1971 . - . ID=gene-HMPREF2948_00010;Name=HMPREF2948_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00010 KV814705.1 Protein Homology CDS 1441 1971 . - 0 ID=cds-OFQ20867.1;Parent=gene-HMPREF2948_00010;Dbxref=NCBI_GP:OFQ20867.1;Name=OFQ20867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695137.1;locus_tag=HMPREF2948_00010;product=ATP-dependent protease subunit HslV;protein_id=OFQ20867.1;transl_table=11 KV814705.1 Genbank gene 2190 2897 . + . ID=gene-HMPREF2948_00015;Name=HMPREF2948_00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00015 KV814705.1 Protein Homology CDS 2190 2897 . + 0 ID=cds-OFQ20868.1;Parent=gene-HMPREF2948_00015;Dbxref=NCBI_GP:OFQ20868.1;Name=OFQ20868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010676244.1;locus_tag=HMPREF2948_00015;product=acid phosphatase;protein_id=OFQ20868.1;transl_table=11 KV814705.1 Genbank gene 3013 4623 . + . ID=gene-HMPREF2948_00020;Name=HMPREF2948_00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00020 KV814705.1 Protein Homology CDS 3013 4623 . + 0 ID=cds-OFQ20869.1;Parent=gene-HMPREF2948_00020;Dbxref=NCBI_GP:OFQ20869.1;Name=OFQ20869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698905.1;locus_tag=HMPREF2948_00020;product=recombinase RmuC;protein_id=OFQ20869.1;transl_table=11 KV814705.1 Genbank pseudogene 4705 4890 . + . ID=gene-HMPREF2948_00025;Name=HMPREF2948_00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_00025;pseudo=true KV814705.1 Protein Homology CDS 4705 4890 . + 0 ID=cds-HMPREF2948_00025;Parent=gene-HMPREF2948_00025;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007242299.1;locus_tag=HMPREF2948_00025;product=hypothetical protein;pseudo=true;transl_table=11 KV814705.1 Genbank gene 5059 5718 . - . ID=gene-HMPREF2948_00030;Name=HMPREF2948_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00030 KV814705.1 Protein Homology CDS 5059 5718 . - 0 ID=cds-OFQ20870.1;Parent=gene-HMPREF2948_00030;Dbxref=NCBI_GP:OFQ20870.1;Name=OFQ20870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646958.1;locus_tag=HMPREF2948_00030;product=hypothetical protein;protein_id=OFQ20870.1;transl_table=11 KV814705.1 Genbank gene 5718 6044 . - . ID=gene-HMPREF2948_00035;Name=HMPREF2948_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00035 KV814705.1 Protein Homology CDS 5718 6044 . - 0 ID=cds-OFQ20871.1;Parent=gene-HMPREF2948_00035;Dbxref=NCBI_GP:OFQ20871.1;Name=OFQ20871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647162.1;locus_tag=HMPREF2948_00035;product=hypothetical protein;protein_id=OFQ20871.1;transl_table=11 KV814705.1 Genbank gene 6114 6311 . - . ID=gene-HMPREF2948_00040;Name=HMPREF2948_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00040 KV814705.1 GeneMarkS+ CDS 6114 6311 . - 0 ID=cds-OFQ20872.1;Parent=gene-HMPREF2948_00040;Dbxref=NCBI_GP:OFQ20872.1;Name=OFQ20872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00040;product=hypothetical protein;protein_id=OFQ20872.1;transl_table=11 KV814705.1 Genbank gene 6292 6639 . - . ID=gene-HMPREF2948_00045;Name=HMPREF2948_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00045 KV814705.1 Protein Homology CDS 6292 6639 . - 0 ID=cds-OFQ20873.1;Parent=gene-HMPREF2948_00045;Dbxref=NCBI_GP:OFQ20873.1;Name=OFQ20873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700111.1;locus_tag=HMPREF2948_00045;product=hypothetical protein;protein_id=OFQ20873.1;transl_table=11 KV814705.1 Genbank gene 6654 7499 . - . ID=gene-HMPREF2948_00050;Name=HMPREF2948_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00050 KV814705.1 Protein Homology CDS 6654 7499 . - 0 ID=cds-OFQ20874.1;Parent=gene-HMPREF2948_00050;Dbxref=NCBI_GP:OFQ20874.1;Name=OFQ20874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524448.1;locus_tag=HMPREF2948_00050;product=hypothetical protein;protein_id=OFQ20874.1;transl_table=11 KV814705.1 Genbank gene 7557 7676 . - . ID=gene-HMPREF2948_00055;Name=HMPREF2948_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00055 KV814705.1 Protein Homology CDS 7557 7676 . - 0 ID=cds-OFQ20875.1;Parent=gene-HMPREF2948_00055;Dbxref=NCBI_GP:OFQ20875.1;Name=OFQ20875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P71390.1;locus_tag=HMPREF2948_00055;product=hypothetical protein;protein_id=OFQ20875.1;transl_table=11 KV814705.1 Genbank gene 7852 8340 . - . ID=gene-HMPREF2948_00060;Name=HMPREF2948_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00060 KV814705.1 Protein Homology CDS 7852 8340 . - 0 ID=cds-OFQ20876.1;Parent=gene-HMPREF2948_00060;Dbxref=NCBI_GP:OFQ20876.1;Name=OFQ20876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995417.1;locus_tag=HMPREF2948_00060;product=enoyl-CoA hydratase;protein_id=OFQ20876.1;transl_table=11 KV814705.1 Genbank gene 8333 8959 . - . ID=gene-HMPREF2948_00065;Name=HMPREF2948_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00065 KV814705.1 Protein Homology CDS 8333 8959 . - 0 ID=cds-OFQ20877.1;Parent=gene-HMPREF2948_00065;Dbxref=NCBI_GP:OFQ20877.1;Name=OFQ20877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633779.1;locus_tag=HMPREF2948_00065;product=hypothetical protein;protein_id=OFQ20877.1;transl_table=11 KV814705.1 Genbank gene 8990 10456 . - . ID=gene-HMPREF2948_00070;Name=HMPREF2948_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00070 KV814705.1 GeneMarkS+ CDS 8990 10456 . - 0 ID=cds-OFQ20878.1;Parent=gene-HMPREF2948_00070;Dbxref=NCBI_GP:OFQ20878.1;Name=OFQ20878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00070;product=hypothetical protein;protein_id=OFQ20878.1;transl_table=11 KV814705.1 Genbank gene 10460 11056 . - . ID=gene-HMPREF2948_00075;Name=HMPREF2948_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00075 KV814705.1 Protein Homology CDS 10460 11056 . - 0 ID=cds-OFQ20879.1;Parent=gene-HMPREF2948_00075;Dbxref=NCBI_GP:OFQ20879.1;Name=OFQ20879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698157.1;locus_tag=HMPREF2948_00075;product=hypothetical protein;protein_id=OFQ20879.1;transl_table=11 KV814705.1 Genbank gene 11053 12117 . - . ID=gene-HMPREF2948_00080;Name=HMPREF2948_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00080 KV814705.1 Protein Homology CDS 11053 12117 . - 0 ID=cds-OFQ20880.1;Parent=gene-HMPREF2948_00080;Dbxref=NCBI_GP:OFQ20880.1;Name=OFQ20880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702385.1;locus_tag=HMPREF2948_00080;product=baseplate J protein;protein_id=OFQ20880.1;transl_table=11 KV814705.1 Genbank gene 12132 12482 . - . ID=gene-HMPREF2948_00085;Name=HMPREF2948_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00085 KV814705.1 Protein Homology CDS 12132 12482 . - 0 ID=cds-OFQ20881.1;Parent=gene-HMPREF2948_00085;Dbxref=NCBI_GP:OFQ20881.1;Name=OFQ20881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702386.1;locus_tag=HMPREF2948_00085;product=hypothetical protein;protein_id=OFQ20881.1;transl_table=11 KV814705.1 Genbank gene 12552 13187 . - . ID=gene-HMPREF2948_00090;Name=HMPREF2948_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00090 KV814705.1 Protein Homology CDS 12552 13187 . - 0 ID=cds-OFQ20882.1;Parent=gene-HMPREF2948_00090;Dbxref=NCBI_GP:OFQ20882.1;Name=OFQ20882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702387.1;locus_tag=HMPREF2948_00090;product=baseplate assembly protein;protein_id=OFQ20882.1;transl_table=11 KV814705.1 Genbank gene 13184 14323 . - . ID=gene-HMPREF2948_00095;Name=HMPREF2948_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00095 KV814705.1 Protein Homology CDS 13184 14323 . - 0 ID=cds-OFQ20883.1;Parent=gene-HMPREF2948_00095;Dbxref=NCBI_GP:OFQ20883.1;Name=OFQ20883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647040.1;locus_tag=HMPREF2948_00095;product=phage tail protein;protein_id=OFQ20883.1;transl_table=11 KV814705.1 Genbank gene 14313 15650 . - . ID=gene-HMPREF2948_00100;Name=HMPREF2948_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00100 KV814705.1 Protein Homology CDS 14313 15650 . - 0 ID=cds-OFQ20884.1;Parent=gene-HMPREF2948_00100;Dbxref=NCBI_GP:OFQ20884.1;Name=OFQ20884.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702389.1;locus_tag=HMPREF2948_00100;product=phage morphogenesis protein;protein_id=OFQ20884.1;transl_table=11 KV814705.1 Genbank gene 15654 17933 . - . ID=gene-HMPREF2948_00105;Name=HMPREF2948_00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00105 KV814705.1 Protein Homology CDS 15654 17933 . - 0 ID=cds-OFQ20885.1;Parent=gene-HMPREF2948_00105;Dbxref=NCBI_GP:OFQ20885.1;Name=OFQ20885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647038.1;locus_tag=HMPREF2948_00105;product=phage tail tape measure protein;protein_id=OFQ20885.1;transl_table=11 KV814705.1 Genbank gene 17980 18186 . - . ID=gene-HMPREF2948_00110;Name=HMPREF2948_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00110 KV814705.1 Protein Homology CDS 17980 18186 . - 0 ID=cds-OFQ20886.1;Parent=gene-HMPREF2948_00110;Dbxref=NCBI_GP:OFQ20886.1;Name=OFQ20886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646885.1;locus_tag=HMPREF2948_00110;product=hypothetical protein;protein_id=OFQ20886.1;transl_table=11 KV814705.1 Genbank gene 18201 18542 . - . ID=gene-HMPREF2948_00115;Name=HMPREF2948_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00115 KV814705.1 Protein Homology CDS 18201 18542 . - 0 ID=cds-OFQ20887.1;Parent=gene-HMPREF2948_00115;Dbxref=NCBI_GP:OFQ20887.1;Name=OFQ20887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646940.1;locus_tag=HMPREF2948_00115;product=hypothetical protein;protein_id=OFQ20887.1;transl_table=11 KV814705.1 Genbank gene 18542 18916 . - . ID=gene-HMPREF2948_00120;Name=HMPREF2948_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00120 KV814705.1 Protein Homology CDS 18542 18916 . - 0 ID=cds-OFQ20888.1;Parent=gene-HMPREF2948_00120;Dbxref=NCBI_GP:OFQ20888.1;Name=OFQ20888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005606530.1;locus_tag=HMPREF2948_00120;product=phage tail protein;protein_id=OFQ20888.1;transl_table=11 KV814705.1 Genbank gene 18926 20341 . - . ID=gene-HMPREF2948_00125;Name=HMPREF2948_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00125 KV814705.1 Protein Homology CDS 18926 20341 . - 0 ID=cds-OFQ20889.1;Parent=gene-HMPREF2948_00125;Dbxref=NCBI_GP:OFQ20889.1;Name=OFQ20889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017807455.1;locus_tag=HMPREF2948_00125;product=phage tail protein;protein_id=OFQ20889.1;transl_table=11 KV814705.1 Genbank gene 20334 20516 . - . ID=gene-HMPREF2948_00130;Name=HMPREF2948_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00130 KV814705.1 Protein Homology CDS 20334 20516 . - 0 ID=cds-OFQ20890.1;Parent=gene-HMPREF2948_00130;Dbxref=NCBI_GP:OFQ20890.1;Name=OFQ20890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995430.1;locus_tag=HMPREF2948_00130;product=hypothetical protein;protein_id=OFQ20890.1;transl_table=11 KV814705.1 Genbank gene 20488 21150 . - . ID=gene-HMPREF2948_00135;Name=HMPREF2948_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00135 KV814705.1 Protein Homology CDS 20488 21150 . - 0 ID=cds-OFQ20891.1;Parent=gene-HMPREF2948_00135;Dbxref=NCBI_GP:OFQ20891.1;Name=OFQ20891.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005646950.1;locus_tag=HMPREF2948_00135;product=hypothetical protein;protein_id=OFQ20891.1;transl_table=11 KV814705.1 Genbank gene 21134 21565 . - . ID=gene-HMPREF2948_00140;Name=HMPREF2948_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00140 KV814705.1 Protein Homology CDS 21134 21565 . - 0 ID=cds-OFQ20892.1;Parent=gene-HMPREF2948_00140;Dbxref=NCBI_GP:OFQ20892.1;Name=OFQ20892.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341500.1;locus_tag=HMPREF2948_00140;product=hypothetical protein;protein_id=OFQ20892.1;transl_table=11 KV814705.1 Genbank gene 21575 21931 . - . ID=gene-HMPREF2948_00145;Name=HMPREF2948_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00145 KV814705.1 Protein Homology CDS 21575 21931 . - 0 ID=cds-OFQ20893.1;Parent=gene-HMPREF2948_00145;Dbxref=NCBI_GP:OFQ20893.1;Name=OFQ20893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647063.1;locus_tag=HMPREF2948_00145;product=hypothetical protein;protein_id=OFQ20893.1;transl_table=11 KV814705.1 Genbank gene 21971 22894 . - . ID=gene-HMPREF2948_00150;Name=HMPREF2948_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00150 KV814705.1 Protein Homology CDS 21971 22894 . - 0 ID=cds-OFQ20894.1;Parent=gene-HMPREF2948_00150;Dbxref=NCBI_GP:OFQ20894.1;Name=OFQ20894.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642609.1;locus_tag=HMPREF2948_00150;product=head protein;protein_id=OFQ20894.1;transl_table=11 KV814705.1 Genbank gene 22894 23931 . - . ID=gene-HMPREF2948_00155;Name=HMPREF2948_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00155 KV814705.1 Protein Homology CDS 22894 23931 . - 0 ID=cds-OFQ20895.1;Parent=gene-HMPREF2948_00155;Dbxref=NCBI_GP:OFQ20895.1;Name=OFQ20895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995436.1;locus_tag=HMPREF2948_00155;product=I protein;protein_id=OFQ20895.1;transl_table=11 KV814705.1 Genbank gene 24214 24630 . - . ID=gene-HMPREF2948_00160;Name=HMPREF2948_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00160 KV814705.1 Protein Homology CDS 24214 24630 . - 0 ID=cds-OFQ20896.1;Parent=gene-HMPREF2948_00160;Dbxref=NCBI_GP:OFQ20896.1;Name=OFQ20896.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656896.1;locus_tag=HMPREF2948_00160;product=virion morphogenesis protein;protein_id=OFQ20896.1;transl_table=11 KV814705.1 Genbank gene 24766 26067 . - . ID=gene-HMPREF2948_00165;Name=HMPREF2948_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00165 KV814705.1 Protein Homology CDS 24766 26067 . - 0 ID=cds-OFQ20897.1;Parent=gene-HMPREF2948_00165;Dbxref=NCBI_GP:OFQ20897.1;Name=OFQ20897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647075.1;locus_tag=HMPREF2948_00165;product=phage head morphogenesis protein;protein_id=OFQ20897.1;transl_table=11 KV814705.1 Genbank gene 26051 27673 . - . ID=gene-HMPREF2948_00170;Name=HMPREF2948_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00170 KV814705.1 Protein Homology CDS 26051 27673 . - 0 ID=cds-OFQ20898.1;Parent=gene-HMPREF2948_00170;Dbxref=NCBI_GP:OFQ20898.1;Name=OFQ20898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661920.1;locus_tag=HMPREF2948_00170;product=hypothetical protein;protein_id=OFQ20898.1;transl_table=11 KV814705.1 Genbank gene 27685 29331 . - . ID=gene-HMPREF2948_00175;Name=HMPREF2948_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00175 KV814705.1 Protein Homology CDS 27685 29331 . - 0 ID=cds-OFQ20899.1;Parent=gene-HMPREF2948_00175;Dbxref=NCBI_GP:OFQ20899.1;Name=OFQ20899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642601.1;locus_tag=HMPREF2948_00175;product=hypothetical protein;protein_id=OFQ20899.1;transl_table=11 KV814705.1 Genbank gene 29464 29973 . - . ID=gene-HMPREF2948_00180;Name=HMPREF2948_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00180 KV814705.1 Protein Homology CDS 29464 29973 . - 0 ID=cds-OFQ20900.1;Parent=gene-HMPREF2948_00180;Dbxref=NCBI_GP:OFQ20900.1;Name=OFQ20900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533264.1;locus_tag=HMPREF2948_00180;product=DNA-binding protein;protein_id=OFQ20900.1;transl_table=11 KV814705.1 Genbank gene 29979 30245 . - . ID=gene-HMPREF2948_00185;Name=HMPREF2948_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00185 KV814705.1 Protein Homology CDS 29979 30245 . - 0 ID=cds-OFQ20901.1;Parent=gene-HMPREF2948_00185;Dbxref=NCBI_GP:OFQ20901.1;Name=OFQ20901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341490.1;locus_tag=HMPREF2948_00185;product=hypothetical protein;protein_id=OFQ20901.1;transl_table=11 KV814705.1 Genbank gene 30245 30499 . - . ID=gene-HMPREF2948_00190;Name=HMPREF2948_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00190 KV814705.1 Protein Homology CDS 30245 30499 . - 0 ID=cds-OFQ20902.1;Parent=gene-HMPREF2948_00190;Dbxref=NCBI_GP:OFQ20902.1;Name=OFQ20902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698034.1;locus_tag=HMPREF2948_00190;product=hypothetical protein;protein_id=OFQ20902.1;transl_table=11 KV814705.1 Genbank gene 30483 30692 . - . ID=gene-HMPREF2948_00195;Name=HMPREF2948_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00195 KV814705.1 Protein Homology CDS 30483 30692 . - 0 ID=cds-OFQ20903.1;Parent=gene-HMPREF2948_00195;Dbxref=NCBI_GP:OFQ20903.1;Name=OFQ20903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005738313.1;locus_tag=HMPREF2948_00195;product=hypothetical protein;protein_id=OFQ20903.1;transl_table=11 KV814705.1 Genbank gene 30616 30873 . - . ID=gene-HMPREF2948_00200;Name=HMPREF2948_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00200 KV814705.1 Protein Homology CDS 30616 30873 . - 0 ID=cds-OFQ20904.1;Parent=gene-HMPREF2948_00200;Dbxref=NCBI_GP:OFQ20904.1;Name=OFQ20904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688568.1;locus_tag=HMPREF2948_00200;product=hypothetical protein;protein_id=OFQ20904.1;transl_table=11 KV814705.1 Genbank gene 30873 31163 . - . ID=gene-HMPREF2948_00205;Name=HMPREF2948_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00205 KV814705.1 Protein Homology CDS 30873 31163 . - 0 ID=cds-OFQ20905.1;Parent=gene-HMPREF2948_00205;Dbxref=NCBI_GP:OFQ20905.1;Name=OFQ20905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641511.1;locus_tag=HMPREF2948_00205;product=hypothetical protein;protein_id=OFQ20905.1;transl_table=11 KV814705.1 Genbank gene 31317 31820 . - . ID=gene-HMPREF2948_00210;Name=HMPREF2948_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00210 KV814705.1 Protein Homology CDS 31317 31820 . - 0 ID=cds-OFQ20906.1;Parent=gene-HMPREF2948_00210;Dbxref=NCBI_GP:OFQ20906.1;Name=OFQ20906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761667.1;locus_tag=HMPREF2948_00210;product=hypothetical protein;protein_id=OFQ20906.1;transl_table=11 KV814705.1 Genbank gene 31902 32327 . - . ID=gene-HMPREF2948_00215;Name=HMPREF2948_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00215 KV814705.1 Protein Homology CDS 31902 32327 . - 0 ID=cds-OFQ20990.1;Parent=gene-HMPREF2948_00215;Dbxref=NCBI_GP:OFQ20990.1;Name=OFQ20990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341484.1;locus_tag=HMPREF2948_00215;product=mor transcription activator family protein;protein_id=OFQ20990.1;transl_table=11 KV814705.1 Genbank gene 32439 33143 . - . ID=gene-HMPREF2948_00220;Name=HMPREF2948_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00220 KV814705.1 Protein Homology CDS 32439 33143 . - 0 ID=cds-OFQ20907.1;Parent=gene-HMPREF2948_00220;Dbxref=NCBI_GP:OFQ20907.1;Name=OFQ20907.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698141.1;locus_tag=HMPREF2948_00220;product=hypothetical protein;protein_id=OFQ20907.1;transl_table=11 KV814705.1 Genbank gene 33202 33606 . - . ID=gene-HMPREF2948_00225;Name=HMPREF2948_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00225 KV814705.1 Protein Homology CDS 33202 33606 . - 0 ID=cds-OFQ20908.1;Parent=gene-HMPREF2948_00225;Dbxref=NCBI_GP:OFQ20908.1;Name=OFQ20908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341482.1;locus_tag=HMPREF2948_00225;product=hypothetical protein;protein_id=OFQ20908.1;transl_table=11 KV814705.1 Genbank gene 33599 33982 . - . ID=gene-HMPREF2948_00230;Name=HMPREF2948_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00230 KV814705.1 Protein Homology CDS 33599 33982 . - 0 ID=cds-OFQ20909.1;Parent=gene-HMPREF2948_00230;Dbxref=NCBI_GP:OFQ20909.1;Name=OFQ20909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524247.1;locus_tag=HMPREF2948_00230;product=hypothetical protein;protein_id=OFQ20909.1;transl_table=11 KV814705.1 Genbank gene 33958 34455 . - . ID=gene-HMPREF2948_00235;Name=HMPREF2948_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00235 KV814705.1 Protein Homology CDS 33958 34455 . - 0 ID=cds-OFQ20910.1;Parent=gene-HMPREF2948_00235;Dbxref=NCBI_GP:OFQ20910.1;Name=OFQ20910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761337.1;locus_tag=HMPREF2948_00235;product=hypothetical protein;protein_id=OFQ20910.1;transl_table=11 KV814705.1 Genbank pseudogene 34640 34864 . - . ID=gene-HMPREF2948_00240;Name=HMPREF2948_00240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_00240;pseudo=true KV814705.1 Protein Homology CDS 34640 34864 . - 0 ID=cds-HMPREF2948_00240;Parent=gene-HMPREF2948_00240;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005560428.1;locus_tag=HMPREF2948_00240;product=hypothetical protein;pseudo=true;transl_table=11 KV814705.1 Genbank gene 34861 35559 . - . ID=gene-HMPREF2948_00245;Name=HMPREF2948_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00245 KV814705.1 Protein Homology CDS 34861 35559 . - 0 ID=cds-OFQ20911.1;Parent=gene-HMPREF2948_00245;Dbxref=NCBI_GP:OFQ20911.1;Name=OFQ20911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005537619.1;locus_tag=HMPREF2948_00245;product=hypothetical protein;protein_id=OFQ20911.1;transl_table=11 KV814705.1 Genbank gene 35562 35735 . - . ID=gene-HMPREF2948_00250;Name=HMPREF2948_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00250 KV814705.1 Protein Homology CDS 35562 35735 . - 0 ID=cds-OFQ20912.1;Parent=gene-HMPREF2948_00250;Dbxref=NCBI_GP:OFQ20912.1;Name=OFQ20912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758675.1;locus_tag=HMPREF2948_00250;product=FMN-dependent NADH-azoreductase;protein_id=OFQ20912.1;transl_table=11 KV814705.1 Genbank gene 35889 36098 . - . ID=gene-HMPREF2948_00255;Name=HMPREF2948_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00255 KV814705.1 Protein Homology CDS 35889 36098 . - 0 ID=cds-OFQ20913.1;Parent=gene-HMPREF2948_00255;Dbxref=NCBI_GP:OFQ20913.1;Name=OFQ20913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647065.1;locus_tag=HMPREF2948_00255;product=hypothetical protein;protein_id=OFQ20913.1;transl_table=11 KV814705.1 Genbank gene 36283 36900 . - . ID=gene-HMPREF2948_00260;Name=HMPREF2948_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00260 KV814705.1 Protein Homology CDS 36283 36900 . - 0 ID=cds-OFQ20914.1;Parent=gene-HMPREF2948_00260;Dbxref=NCBI_GP:OFQ20914.1;Name=OFQ20914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688595.1;locus_tag=HMPREF2948_00260;product=sulfate transporter;protein_id=OFQ20914.1;transl_table=11 KV814705.1 Genbank gene 36901 37092 . - . ID=gene-HMPREF2948_00265;Name=HMPREF2948_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00265 KV814705.1 Protein Homology CDS 36901 37092 . - 0 ID=cds-OFQ20915.1;Parent=gene-HMPREF2948_00265;Dbxref=NCBI_GP:OFQ20915.1;Name=OFQ20915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688597.1;locus_tag=HMPREF2948_00265;product=hypothetical protein;protein_id=OFQ20915.1;transl_table=11 KV814705.1 Genbank gene 37101 37397 . - . ID=gene-HMPREF2948_00270;Name=HMPREF2948_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00270 KV814705.1 Protein Homology CDS 37101 37397 . - 0 ID=cds-OFQ20916.1;Parent=gene-HMPREF2948_00270;Dbxref=NCBI_GP:OFQ20916.1;Name=OFQ20916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527864.1;locus_tag=HMPREF2948_00270;product=hypothetical protein;protein_id=OFQ20916.1;transl_table=11 KV814705.1 Genbank gene 37408 38289 . - . ID=gene-HMPREF2948_00275;Name=HMPREF2948_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00275 KV814705.1 Protein Homology CDS 37408 38289 . - 0 ID=cds-OFQ20917.1;Parent=gene-HMPREF2948_00275;Dbxref=NCBI_GP:OFQ20917.1;Name=OFQ20917.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659430.1;locus_tag=HMPREF2948_00275;product=transcriptional regulator;protein_id=OFQ20917.1;transl_table=11 KV814705.1 Genbank gene 38300 40279 . - . ID=gene-HMPREF2948_00280;Name=HMPREF2948_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00280 KV814705.1 Protein Homology CDS 38300 40279 . - 0 ID=cds-OFQ20918.1;Parent=gene-HMPREF2948_00280;Dbxref=NCBI_GP:OFQ20918.1;Name=OFQ20918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698105.1;locus_tag=HMPREF2948_00280;product=transposase;protein_id=OFQ20918.1;transl_table=11 KV814705.1 Genbank gene 40293 40556 . - . ID=gene-HMPREF2948_00285;Name=HMPREF2948_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00285 KV814705.1 Protein Homology CDS 40293 40556 . - 0 ID=cds-OFQ20919.1;Parent=gene-HMPREF2948_00285;Dbxref=NCBI_GP:OFQ20919.1;Name=OFQ20919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805342.1;locus_tag=HMPREF2948_00285;product=Nlp family transcriptional regulator;protein_id=OFQ20919.1;transl_table=11 KV814705.1 Genbank gene 40783 41457 . + . ID=gene-HMPREF2948_00290;Name=HMPREF2948_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00290 KV814705.1 Protein Homology CDS 40783 41457 . + 0 ID=cds-OFQ20991.1;Parent=gene-HMPREF2948_00290;Dbxref=NCBI_GP:OFQ20991.1;Name=OFQ20991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761253.1;locus_tag=HMPREF2948_00290;product=repressor;protein_id=OFQ20991.1;transl_table=11 KV814705.1 Genbank gene 41992 42426 . + . ID=gene-HMPREF2948_00295;Name=HMPREF2948_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00295 KV814705.1 Protein Homology CDS 41992 42426 . + 0 ID=cds-OFQ20920.1;Parent=gene-HMPREF2948_00295;Dbxref=NCBI_GP:OFQ20920.1;Name=OFQ20920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005585997.1;locus_tag=HMPREF2948_00295;product=hypothetical protein;protein_id=OFQ20920.1;transl_table=11 KV814705.1 Genbank gene 42465 42860 . - . ID=gene-HMPREF2948_00300;Name=HMPREF2948_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00300 KV814705.1 Protein Homology CDS 42465 42860 . - 0 ID=cds-OFQ20921.1;Parent=gene-HMPREF2948_00300;Dbxref=NCBI_GP:OFQ20921.1;Name=OFQ20921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44754.1;locus_tag=HMPREF2948_00300;product=heat-shock protein;protein_id=OFQ20921.1;transl_table=11 KV814705.1 Genbank gene 42925 43473 . + . ID=gene-HMPREF2948_00305;Name=HMPREF2948_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00305 KV814705.1 Protein Homology CDS 42925 43473 . + 0 ID=cds-OFQ20922.1;Parent=gene-HMPREF2948_00305;Dbxref=NCBI_GP:OFQ20922.1;Name=OFQ20922.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698848.1;locus_tag=HMPREF2948_00305;product=ADP compounds hydrolase NudE;protein_id=OFQ20922.1;transl_table=11 KV814705.1 Genbank gene 43628 45589 . + . ID=gene-HMPREF2948_00310;Name=HMPREF2948_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00310 KV814705.1 Protein Homology CDS 43628 45589 . + 0 ID=cds-OFQ20992.1;Parent=gene-HMPREF2948_00310;Dbxref=NCBI_GP:OFQ20992.1;Name=OFQ20992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005599201.1;locus_tag=HMPREF2948_00310;product=oligopeptide transporter%2C OPT family;protein_id=OFQ20992.1;transl_table=11 KV814705.1 Genbank gene 45640 46044 . + . ID=gene-HMPREF2948_00315;Name=HMPREF2948_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00315 KV814705.1 GeneMarkS+ CDS 45640 46044 . + 0 ID=cds-OFQ20923.1;Parent=gene-HMPREF2948_00315;Dbxref=NCBI_GP:OFQ20923.1;Name=OFQ20923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00315;product=hypothetical protein;protein_id=OFQ20923.1;transl_table=11 KV814705.1 Genbank gene 46054 46860 . + . ID=gene-HMPREF2948_00320;Name=HMPREF2948_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00320 KV814705.1 Protein Homology CDS 46054 46860 . + 0 ID=cds-OFQ20924.1;Parent=gene-HMPREF2948_00320;Dbxref=NCBI_GP:OFQ20924.1;Name=OFQ20924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064590.1;locus_tag=HMPREF2948_00320;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=OFQ20924.1;transl_table=11 KV814705.1 Genbank gene 46933 48417 . + . ID=gene-HMPREF2948_00325;Name=HMPREF2948_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00325 KV814705.1 Protein Homology CDS 46933 48417 . + 0 ID=cds-OFQ20925.1;Parent=gene-HMPREF2948_00325;Dbxref=NCBI_GP:OFQ20925.1;Name=OFQ20925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694154.1;locus_tag=HMPREF2948_00325;product=glucose-6-phosphate dehydrogenase;protein_id=OFQ20925.1;transl_table=11 KV814705.1 Genbank gene 48502 49200 . + . ID=gene-HMPREF2948_00330;Name=HMPREF2948_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00330 KV814705.1 Protein Homology CDS 48502 49200 . + 0 ID=cds-OFQ20926.1;Parent=gene-HMPREF2948_00330;Dbxref=NCBI_GP:OFQ20926.1;Name=OFQ20926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055099.1;locus_tag=HMPREF2948_00330;product=6-phosphogluconolactonase;protein_id=OFQ20926.1;transl_table=11 KV814705.1 Genbank gene 49277 49978 . + . ID=gene-HMPREF2948_00335;Name=HMPREF2948_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00335 KV814705.1 GeneMarkS+ CDS 49277 49978 . + 0 ID=cds-OFQ20927.1;Parent=gene-HMPREF2948_00335;Dbxref=NCBI_GP:OFQ20927.1;Name=OFQ20927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00335;product=hypothetical protein;protein_id=OFQ20927.1;transl_table=11 KV814705.1 Genbank gene 50028 51482 . + . ID=gene-HMPREF2948_00340;Name=HMPREF2948_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00340 KV814705.1 Protein Homology CDS 50028 51482 . + 0 ID=cds-OFQ20928.1;Parent=gene-HMPREF2948_00340;Dbxref=NCBI_GP:OFQ20928.1;Name=OFQ20928.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649523.1;locus_tag=HMPREF2948_00340;product=phosphogluconate dehydrogenase (NADP(+)-dependent%2C decarboxylating);protein_id=OFQ20928.1;transl_table=11 KV814705.1 Genbank gene 51562 51882 . + . ID=gene-HMPREF2948_00345;Name=HMPREF2948_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00345 KV814705.1 Protein Homology CDS 51562 51882 . + 0 ID=cds-OFQ20929.1;Parent=gene-HMPREF2948_00345;Dbxref=NCBI_GP:OFQ20929.1;Name=OFQ20929.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698914.1;locus_tag=HMPREF2948_00345;product=hypothetical protein;protein_id=OFQ20929.1;transl_table=11 KV814705.1 Genbank gene 52012 52215 . + . ID=gene-HMPREF2948_00350;Name=HMPREF2948_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00350 KV814705.1 Protein Homology CDS 52012 52215 . + 0 ID=cds-OFQ20930.1;Parent=gene-HMPREF2948_00350;Dbxref=NCBI_GP:OFQ20930.1;Name=OFQ20930.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699726.1;locus_tag=HMPREF2948_00350;product=hypothetical protein;protein_id=OFQ20930.1;transl_table=11 KV814705.1 Genbank gene 52259 53587 . - . ID=gene-HMPREF2948_00355;Name=HMPREF2948_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00355 KV814705.1 Protein Homology CDS 52259 53587 . - 0 ID=cds-OFQ20931.1;Parent=gene-HMPREF2948_00355;Dbxref=NCBI_GP:OFQ20931.1;Name=OFQ20931.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064578.1;locus_tag=HMPREF2948_00355;product=ATP-dependent RNA helicase SrmB;protein_id=OFQ20931.1;transl_table=11 KV814705.1 Genbank gene 53658 54356 . + . ID=gene-HMPREF2948_00360;Name=HMPREF2948_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00360 KV814705.1 Protein Homology CDS 53658 54356 . + 0 ID=cds-OFQ20932.1;Parent=gene-HMPREF2948_00360;Dbxref=NCBI_GP:OFQ20932.1;Name=OFQ20932.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699747.1;locus_tag=HMPREF2948_00360;product=tRNA (adenine-N(6)-)-methyltransferase;protein_id=OFQ20932.1;transl_table=11 KV814705.1 Genbank gene 54391 55074 . - . ID=gene-HMPREF2948_00365;Name=HMPREF2948_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00365 KV814705.1 Protein Homology CDS 54391 55074 . - 0 ID=cds-OFQ20933.1;Parent=gene-HMPREF2948_00365;Dbxref=NCBI_GP:OFQ20933.1;Name=OFQ20933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698844.1;locus_tag=HMPREF2948_00365;product=nicotinamide riboside transporter pnuC;protein_id=OFQ20933.1;transl_table=11 KV814705.1 Genbank gene 55274 58036 . + . ID=gene-HMPREF2948_00370;Name=HMPREF2948_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00370 KV814705.1 Protein Homology CDS 55274 58036 . + 0 ID=cds-OFQ20934.1;Parent=gene-HMPREF2948_00370;Dbxref=NCBI_GP:OFQ20934.1;Name=OFQ20934.1;Note=transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0URM0.1;locus_tag=HMPREF2948_00370;product=RNA polymerase-associated protein RapA;protein_id=OFQ20934.1;transl_table=11 KV814705.1 Genbank gene 58038 58697 . + . ID=gene-HMPREF2948_00375;Name=HMPREF2948_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00375 KV814705.1 Protein Homology CDS 58038 58697 . + 0 ID=cds-OFQ20935.1;Parent=gene-HMPREF2948_00375;Dbxref=NCBI_GP:OFQ20935.1;Name=OFQ20935.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055190.1;locus_tag=HMPREF2948_00375;product=RNA pseudouridine synthase;protein_id=OFQ20935.1;transl_table=11 KV814705.1 Genbank gene 58755 59138 . - . ID=gene-HMPREF2948_00380;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=HMPREF2948_00380 KV814705.1 Protein Homology CDS 58755 59138 . - 0 ID=cds-OFQ20936.1;Parent=gene-HMPREF2948_00380;Dbxref=NCBI_GP:OFQ20936.1;Name=OFQ20936.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014992360.1;locus_tag=HMPREF2948_00380;product=50S ribosomal protein L17;protein_id=OFQ20936.1;transl_table=11 KV814705.1 Genbank gene 59179 60168 . - . ID=gene-HMPREF2948_00385;Name=HMPREF2948_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00385 KV814705.1 Protein Homology CDS 59179 60168 . - 0 ID=cds-OFQ20937.1;Parent=gene-HMPREF2948_00385;Dbxref=NCBI_GP:OFQ20937.1;Name=OFQ20937.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q6CZZ5.1;locus_tag=HMPREF2948_00385;product=DNA-directed RNA polymerase subunit alpha;protein_id=OFQ20937.1;transl_table=11 KV814705.1 Genbank gene 60200 60820 . - . ID=gene-HMPREF2948_00390;Name=HMPREF2948_00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00390 KV814705.1 Protein Homology CDS 60200 60820 . - 0 ID=cds-OFQ20938.1;Parent=gene-HMPREF2948_00390;Dbxref=NCBI_GP:OFQ20938.1;Name=OFQ20938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=HMPREF2948_00390;product=30S ribosomal protein S4;protein_id=OFQ20938.1;transl_table=11 KV814705.1 Genbank gene 60850 61239 . - . ID=gene-HMPREF2948_00395;Name=HMPREF2948_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00395 KV814705.1 Protein Homology CDS 60850 61239 . - 0 ID=cds-OFQ20939.1;Parent=gene-HMPREF2948_00395;Dbxref=NCBI_GP:OFQ20939.1;Name=OFQ20939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O54296.2;locus_tag=HMPREF2948_00395;product=30S ribosomal protein S11;protein_id=OFQ20939.1;transl_table=11 KV814705.1 Genbank gene 61256 61612 . - . ID=gene-HMPREF2948_00400;Name=HMPREF2948_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00400 KV814705.1 Protein Homology CDS 61256 61612 . - 0 ID=cds-OFQ20940.1;Parent=gene-HMPREF2948_00400;Dbxref=NCBI_GP:OFQ20940.1;Name=OFQ20940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=HMPREF2948_00400;product=30S ribosomal protein S13;protein_id=OFQ20940.1;transl_table=11 KV814705.1 Genbank gene 61754 61867 . - . ID=gene-HMPREF2948_00405;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF2948_00405 KV814705.1 Protein Homology CDS 61754 61867 . - 0 ID=cds-OFQ20941.1;Parent=gene-HMPREF2948_00405;Dbxref=NCBI_GP:OFQ20941.1;Name=OFQ20941.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:SwissProt:Q6LV95.1;locus_tag=HMPREF2948_00405;product=50S ribosomal protein L36;protein_id=OFQ20941.1;transl_table=11 KV814705.1 Genbank gene 61896 63221 . - . ID=gene-HMPREF2948_00410;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=HMPREF2948_00410 KV814705.1 Protein Homology CDS 61896 63221 . - 0 ID=cds-OFQ20942.1;Parent=gene-HMPREF2948_00410;Dbxref=NCBI_GP:OFQ20942.1;Name=OFQ20942.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652382.1;locus_tag=HMPREF2948_00410;product=preprotein translocase subunit SecY;protein_id=OFQ20942.1;transl_table=11 KV814705.1 Genbank gene 63229 63663 . - . ID=gene-HMPREF2948_00415;Name=HMPREF2948_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00415 KV814705.1 Protein Homology CDS 63229 63663 . - 0 ID=cds-OFQ20943.1;Parent=gene-HMPREF2948_00415;Dbxref=NCBI_GP:OFQ20943.1;Name=OFQ20943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q6CZY9.1;locus_tag=HMPREF2948_00415;product=50S ribosomal protein L15;protein_id=OFQ20943.1;transl_table=11 KV814705.1 Genbank gene 63668 63847 . - . ID=gene-HMPREF2948_00420;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=HMPREF2948_00420 KV814705.1 Protein Homology CDS 63668 63847 . - 0 ID=cds-OFQ20944.1;Parent=gene-HMPREF2948_00420;Dbxref=NCBI_GP:OFQ20944.1;Name=OFQ20944.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693169.1;locus_tag=HMPREF2948_00420;product=50S ribosomal protein L30;protein_id=OFQ20944.1;transl_table=11 KV814705.1 Genbank gene 63854 64354 . - . ID=gene-HMPREF2948_00425;Name=HMPREF2948_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00425 KV814705.1 Protein Homology CDS 63854 64354 . - 0 ID=cds-OFQ20945.1;Parent=gene-HMPREF2948_00425;Dbxref=NCBI_GP:OFQ20945.1;Name=OFQ20945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=HMPREF2948_00425;product=30S ribosomal protein S5;protein_id=OFQ20945.1;transl_table=11 KV814705.1 Genbank gene 64369 64722 . - . ID=gene-HMPREF2948_00430;Name=HMPREF2948_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00430 KV814705.1 Protein Homology CDS 64369 64722 . - 0 ID=cds-OFQ20946.1;Parent=gene-HMPREF2948_00430;Dbxref=NCBI_GP:OFQ20946.1;Name=OFQ20946.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q6CZY6.1;locus_tag=HMPREF2948_00430;product=50S ribosomal protein L18;protein_id=OFQ20946.1;transl_table=11 KV814705.1 Genbank gene 64736 65269 . - . ID=gene-HMPREF2948_00435;Name=HMPREF2948_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00435 KV814705.1 Protein Homology CDS 64736 65269 . - 0 ID=cds-OFQ20947.1;Parent=gene-HMPREF2948_00435;Dbxref=NCBI_GP:OFQ20947.1;Name=OFQ20947.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004926436.1;locus_tag=HMPREF2948_00435;product=50S ribosomal protein L6;protein_id=OFQ20947.1;transl_table=11 KV814705.1 Genbank gene 65285 65677 . - . ID=gene-HMPREF2948_00440;Name=HMPREF2948_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00440 KV814705.1 Protein Homology CDS 65285 65677 . - 0 ID=cds-OFQ20948.1;Parent=gene-HMPREF2948_00440;Dbxref=NCBI_GP:OFQ20948.1;Name=OFQ20948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7MYG5.1;locus_tag=HMPREF2948_00440;product=30S ribosomal protein S8;protein_id=OFQ20948.1;transl_table=11 KV814705.1 Genbank gene 65714 66019 . - . ID=gene-HMPREF2948_00445;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=HMPREF2948_00445 KV814705.1 Protein Homology CDS 65714 66019 . - 0 ID=cds-OFQ20949.1;Parent=gene-HMPREF2948_00445;Dbxref=NCBI_GP:OFQ20949.1;Name=OFQ20949.1;Note=located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif;gbkey=CDS;gene=rpsN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=HMPREF2948_00445;product=30S ribosomal protein S14;protein_id=OFQ20949.1;transl_table=11 KV814705.1 Genbank gene 66031 66570 . - . ID=gene-HMPREF2948_00450;Name=HMPREF2948_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00450 KV814705.1 Protein Homology CDS 66031 66570 . - 0 ID=cds-OFQ20950.1;Parent=gene-HMPREF2948_00450;Dbxref=NCBI_GP:OFQ20950.1;Name=OFQ20950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46178.1;locus_tag=HMPREF2948_00450;product=50S ribosomal protein L5;protein_id=OFQ20950.1;transl_table=11 KV814705.1 Genbank gene 66588 66899 . - . ID=gene-HMPREF2948_00455;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=HMPREF2948_00455 KV814705.1 Protein Homology CDS 66588 66899 . - 0 ID=cds-OFQ20951.1;Parent=gene-HMPREF2948_00455;Dbxref=NCBI_GP:OFQ20951.1;Name=OFQ20951.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014992365.1;locus_tag=HMPREF2948_00455;product=50S ribosomal protein L24;protein_id=OFQ20951.1;transl_table=11 KV814705.1 Genbank gene 66913 67284 . - . ID=gene-HMPREF2948_00460;Name=HMPREF2948_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00460 KV814705.1 Protein Homology CDS 66913 67284 . - 0 ID=cds-OFQ20952.1;Parent=gene-HMPREF2948_00460;Dbxref=NCBI_GP:OFQ20952.1;Name=OFQ20952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005501250.1;locus_tag=HMPREF2948_00460;product=50S ribosomal protein L14;protein_id=OFQ20952.1;transl_table=11 KV814705.1 Genbank pseudogene 67733 68319 . - . ID=gene-HMPREF2948_00465;Name=HMPREF2948_00465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_00465;pseudo=true KV814705.1 Protein Homology CDS 67733 68319 . - 0 ID=cds-HMPREF2948_00465;Parent=gene-HMPREF2948_00465;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007049890.1;locus_tag=HMPREF2948_00465;product=hypothetical protein;pseudo=true;transl_table=11 KV814705.1 Genbank gene 68319 68867 . - . ID=gene-HMPREF2948_00470;Name=HMPREF2948_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00470 KV814705.1 GeneMarkS+ CDS 68319 68867 . - 0 ID=cds-OFQ20953.1;Parent=gene-HMPREF2948_00470;Dbxref=NCBI_GP:OFQ20953.1;Name=OFQ20953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00470;product=hypothetical protein;protein_id=OFQ20953.1;transl_table=11 KV814705.1 Genbank gene 69251 69508 . - . ID=gene-HMPREF2948_00475;Name=HMPREF2948_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00475 KV814705.1 Protein Homology CDS 69251 69508 . - 0 ID=cds-OFQ20954.1;Parent=gene-HMPREF2948_00475;Dbxref=NCBI_GP:OFQ20954.1;Name=OFQ20954.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625886.1;locus_tag=HMPREF2948_00475;product=30S ribosomal protein S17;protein_id=OFQ20954.1;transl_table=11 KV814705.1 Genbank gene 69508 69699 . - . ID=gene-HMPREF2948_00480;Name=HMPREF2948_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00480 KV814705.1 Protein Homology CDS 69508 69699 . - 0 ID=cds-OFQ20955.1;Parent=gene-HMPREF2948_00480;Dbxref=NCBI_GP:OFQ20955.1;Name=OFQ20955.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625888.1;locus_tag=HMPREF2948_00480;product=50S ribosomal protein L29;protein_id=OFQ20955.1;transl_table=11 KV814705.1 Genbank gene 69699 70109 . - . ID=gene-HMPREF2948_00485;Name=HMPREF2948_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00485 KV814705.1 Protein Homology CDS 69699 70109 . - 0 ID=cds-OFQ20956.1;Parent=gene-HMPREF2948_00485;Dbxref=NCBI_GP:OFQ20956.1;Name=OFQ20956.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=HMPREF2948_00485;product=50S ribosomal protein L16;protein_id=OFQ20956.1;transl_table=11 KV814705.1 Genbank gene 70123 70830 . - . ID=gene-HMPREF2948_00490;Name=HMPREF2948_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00490 KV814705.1 Protein Homology CDS 70123 70830 . - 0 ID=cds-OFQ20957.1;Parent=gene-HMPREF2948_00490;Dbxref=NCBI_GP:OFQ20957.1;Name=OFQ20957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000529946.1;locus_tag=HMPREF2948_00490;product=30S ribosomal protein S3;protein_id=OFQ20957.1;transl_table=11 KV814705.1 Genbank gene 70848 71180 . - . ID=gene-HMPREF2948_00495;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=HMPREF2948_00495 KV814705.1 Protein Homology CDS 70848 71180 . - 0 ID=cds-OFQ20958.1;Parent=gene-HMPREF2948_00495;Dbxref=NCBI_GP:OFQ20958.1;Name=OFQ20958.1;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;gbkey=CDS;gene=rplV;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=HMPREF2948_00495;product=50S ribosomal protein L22;protein_id=OFQ20958.1;transl_table=11 KV814705.1 Genbank gene 71192 71467 . - . ID=gene-HMPREF2948_00500;Name=HMPREF2948_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00500 KV814705.1 Protein Homology CDS 71192 71467 . - 0 ID=cds-OFQ20959.1;Parent=gene-HMPREF2948_00500;Dbxref=NCBI_GP:OFQ20959.1;Name=OFQ20959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7MYF5.1;locus_tag=HMPREF2948_00500;product=30S ribosomal protein S19;protein_id=OFQ20959.1;transl_table=11 KV814705.1 Genbank gene 71492 72313 . - . ID=gene-HMPREF2948_00505;Name=HMPREF2948_00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00505 KV814705.1 Protein Homology CDS 71492 72313 . - 0 ID=cds-OFQ20960.1;Parent=gene-HMPREF2948_00505;Dbxref=NCBI_GP:OFQ20960.1;Name=OFQ20960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652371.1;locus_tag=HMPREF2948_00505;product=50S ribosomal protein L2;protein_id=OFQ20960.1;transl_table=11 KV814705.1 Genbank gene 72331 72630 . - . ID=gene-HMPREF2948_00510;Name=HMPREF2948_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00510 KV814705.1 Protein Homology CDS 72331 72630 . - 0 ID=cds-OFQ20961.1;Parent=gene-HMPREF2948_00510;Dbxref=NCBI_GP:OFQ20961.1;Name=OFQ20961.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632756.1;locus_tag=HMPREF2948_00510;product=50S ribosomal protein L23;protein_id=OFQ20961.1;transl_table=11 KV814705.1 Genbank gene 72627 73229 . - . ID=gene-HMPREF2948_00515;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=HMPREF2948_00515 KV814705.1 Protein Homology CDS 72627 73229 . - 0 ID=cds-OFQ20962.1;Parent=gene-HMPREF2948_00515;Dbxref=NCBI_GP:OFQ20962.1;Name=OFQ20962.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=HMPREF2948_00515;product=50S ribosomal protein L4;protein_id=OFQ20962.1;transl_table=11 KV814705.1 Genbank gene 73245 73871 . - . ID=gene-HMPREF2948_00520;Name=HMPREF2948_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00520 KV814705.1 Protein Homology CDS 73245 73871 . - 0 ID=cds-OFQ20963.1;Parent=gene-HMPREF2948_00520;Dbxref=NCBI_GP:OFQ20963.1;Name=OFQ20963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q3YWT9.1;locus_tag=HMPREF2948_00520;product=50S ribosomal protein L3;protein_id=OFQ20963.1;transl_table=11 KV814705.1 Genbank gene 73888 74199 . - . ID=gene-HMPREF2948_00525;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=HMPREF2948_00525 KV814705.1 Protein Homology CDS 73888 74199 . - 0 ID=cds-OFQ20993.1;Parent=gene-HMPREF2948_00525;Dbxref=NCBI_GP:OFQ20993.1;Name=OFQ20993.1;Note=NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex;gbkey=CDS;gene=rpsJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=HMPREF2948_00525;product=30S ribosomal protein S10;protein_id=OFQ20993.1;transl_table=11 KV814705.1 Genbank gene 74530 75462 . - . ID=gene-HMPREF2948_00530;Name=HMPREF2948_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00530 KV814705.1 Protein Homology CDS 74530 75462 . - 0 ID=cds-OFQ20964.1;Parent=gene-HMPREF2948_00530;Dbxref=NCBI_GP:OFQ20964.1;Name=OFQ20964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695083.1;locus_tag=HMPREF2948_00530;product=cell division protein FtsX;protein_id=OFQ20964.1;transl_table=11 KV814705.1 Genbank gene 75472 76128 . - . ID=gene-HMPREF2948_00535;Name=HMPREF2948_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00535 KV814705.1 Protein Homology CDS 75472 76128 . - 0 ID=cds-OFQ20965.1;Parent=gene-HMPREF2948_00535;Dbxref=NCBI_GP:OFQ20965.1;Name=OFQ20965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44871.1;locus_tag=HMPREF2948_00535;product=cell division ATP-binding protein FtsE;protein_id=OFQ20965.1;transl_table=11 KV814705.1 Genbank gene 76143 77600 . - . ID=gene-HMPREF2948_00540;Name=HMPREF2948_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00540 KV814705.1 Protein Homology CDS 76143 77600 . - 0 ID=cds-OFQ20966.1;Parent=gene-HMPREF2948_00540;Dbxref=NCBI_GP:OFQ20966.1;Name=OFQ20966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695081.1;locus_tag=HMPREF2948_00540;product=signal recognition particle-docking protein FtsY;protein_id=OFQ20966.1;transl_table=11 KV814705.1 Genbank gene 77699 78283 . + . ID=gene-HMPREF2948_00545;Name=HMPREF2948_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00545 KV814705.1 Protein Homology CDS 77699 78283 . + 0 ID=cds-OFQ20967.1;Parent=gene-HMPREF2948_00545;Dbxref=NCBI_GP:OFQ20967.1;Name=OFQ20967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702888.1;locus_tag=HMPREF2948_00545;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=OFQ20967.1;transl_table=11 KV814705.1 Genbank gene 78293 78769 . + . ID=gene-HMPREF2948_00550;Name=HMPREF2948_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00550 KV814705.1 Protein Homology CDS 78293 78769 . + 0 ID=cds-OFQ20968.1;Parent=gene-HMPREF2948_00550;Dbxref=NCBI_GP:OFQ20968.1;Name=OFQ20968.1;Note=member of the SPOUT superfamily of RNA methyltransferases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199349.1;locus_tag=HMPREF2948_00550;product=tRNA (cytosine(34)-2'-O)-methyltransferase TrmL;protein_id=OFQ20968.1;transl_table=11 KV814705.1 Genbank gene 79197 79952 . - . ID=gene-HMPREF2948_00555;Name=HMPREF2948_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00555 KV814705.1 Protein Homology CDS 79197 79952 . - 0 ID=cds-OFQ20969.1;Parent=gene-HMPREF2948_00555;Dbxref=NCBI_GP:OFQ20969.1;Name=OFQ20969.1;Note=represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695078.1;locus_tag=HMPREF2948_00555;product=transcriptional regulator;protein_id=OFQ20969.1;transl_table=11 KV814705.1 Genbank gene 79974 80600 . - . ID=gene-HMPREF2948_00560;Name=HMPREF2948_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00560 KV814705.1 Protein Homology CDS 79974 80600 . - 0 ID=cds-OFQ20970.1;Parent=gene-HMPREF2948_00560;Dbxref=NCBI_GP:OFQ20970.1;Name=OFQ20970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698935.1;locus_tag=HMPREF2948_00560;product=rhomboid family intramembrane serine protease;protein_id=OFQ20970.1;transl_table=11 KV814705.1 Genbank gene 80650 80967 . + . ID=gene-HMPREF2948_00565;Name=HMPREF2948_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00565 KV814705.1 Protein Homology CDS 80650 80967 . + 0 ID=cds-OFQ20971.1;Parent=gene-HMPREF2948_00565;Dbxref=NCBI_GP:OFQ20971.1;Name=OFQ20971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064561.1;locus_tag=HMPREF2948_00565;product=hypothetical protein;protein_id=OFQ20971.1;transl_table=11 KV814705.1 Genbank gene 81281 82102 . + . ID=gene-HMPREF2948_00570;Name=HMPREF2948_00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00570 KV814705.1 Protein Homology CDS 81281 82102 . + 0 ID=cds-OFQ20972.1;Parent=gene-HMPREF2948_00570;Dbxref=NCBI_GP:OFQ20972.1;Name=OFQ20972.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009672371.1;locus_tag=HMPREF2948_00570;product=carbon-phosphorus lyase;protein_id=OFQ20972.1;transl_table=11 KV814705.1 Genbank gene 82119 83321 . + . ID=gene-HMPREF2948_00575;Name=HMPREF2948_00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00575 KV814705.1 Protein Homology CDS 82119 83321 . + 0 ID=cds-OFQ20973.1;Parent=gene-HMPREF2948_00575;Dbxref=NCBI_GP:OFQ20973.1;Name=OFQ20973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635708.1;locus_tag=HMPREF2948_00575;product=MFS transporter;protein_id=OFQ20973.1;transl_table=11 KV814705.1 Genbank gene 83364 84083 . + . ID=gene-HMPREF2948_00580;Name=HMPREF2948_00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00580 KV814705.1 Protein Homology CDS 83364 84083 . + 0 ID=cds-OFQ20974.1;Parent=gene-HMPREF2948_00580;Dbxref=NCBI_GP:OFQ20974.1;Name=OFQ20974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695073.1;locus_tag=HMPREF2948_00580;product=magnesium transporter MgtC;protein_id=OFQ20974.1;transl_table=11 KV814705.1 Genbank gene 84128 85177 . + . ID=gene-HMPREF2948_00585;Name=HMPREF2948_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00585 KV814705.1 Protein Homology CDS 84128 85177 . + 0 ID=cds-OFQ20975.1;Parent=gene-HMPREF2948_00585;Dbxref=NCBI_GP:OFQ20975.1;Name=OFQ20975.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635706.1;locus_tag=HMPREF2948_00585;product=galactose-1-phosphate uridylyltransferase;protein_id=OFQ20975.1;transl_table=11 KV814705.1 Genbank gene 85180 87240 . - . ID=gene-HMPREF2948_00590;Name=HMPREF2948_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00590 KV814705.1 Protein Homology CDS 85180 87240 . - 0 ID=cds-OFQ20976.1;Parent=gene-HMPREF2948_00590;Dbxref=NCBI_GP:OFQ20976.1;Name=OFQ20976.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695069.1;locus_tag=HMPREF2948_00590;product=LacI family transcriptional regulator;protein_id=OFQ20976.1;transl_table=11 KV814705.1 Genbank gene 87607 88332 . - . ID=gene-HMPREF2948_00595;Name=HMPREF2948_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00595 KV814705.1 Protein Homology CDS 87607 88332 . - 0 ID=cds-OFQ20977.1;Parent=gene-HMPREF2948_00595;Dbxref=NCBI_GP:OFQ20977.1;Name=OFQ20977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719770.1;locus_tag=HMPREF2948_00595;product=glutathione peroxidase;protein_id=OFQ20977.1;transl_table=11 KV814705.1 Genbank gene 88464 89369 . + . ID=gene-HMPREF2948_00600;Name=HMPREF2948_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00600 KV814705.1 Protein Homology CDS 88464 89369 . + 0 ID=cds-OFQ20978.1;Parent=gene-HMPREF2948_00600;Dbxref=NCBI_GP:OFQ20978.1;Name=OFQ20978.1;Note=Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698932.1;locus_tag=HMPREF2948_00600;product=transcriptional regulator;protein_id=OFQ20978.1;transl_table=11 KV814705.1 Genbank gene 89395 90018 . + . ID=gene-HMPREF2948_00605;Name=HMPREF2948_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00605 KV814705.1 Protein Homology CDS 89395 90018 . + 0 ID=cds-OFQ20979.1;Parent=gene-HMPREF2948_00605;Dbxref=NCBI_GP:OFQ20979.1;Name=OFQ20979.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064558.1;locus_tag=HMPREF2948_00605;product=DNA-binding transcriptional regulator FabR;protein_id=OFQ20979.1;transl_table=11 KV814705.1 Genbank gene 90086 90904 . - . ID=gene-HMPREF2948_00610;Name=HMPREF2948_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00610 KV814705.1 Protein Homology CDS 90086 90904 . - 0 ID=cds-OFQ20980.1;Parent=gene-HMPREF2948_00610;Dbxref=NCBI_GP:OFQ20980.1;Name=OFQ20980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005821479.1;locus_tag=HMPREF2948_00610;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=OFQ20980.1;transl_table=11 KV814705.1 Genbank gene 91155 91433 . + . ID=gene-HMPREF2948_00615;Name=HMPREF2948_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00615 KV814705.1 Protein Homology CDS 91155 91433 . + 0 ID=cds-OFQ20981.1;Parent=gene-HMPREF2948_00615;Dbxref=NCBI_GP:OFQ20981.1;Name=OFQ20981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005544841.1;locus_tag=HMPREF2948_00615;product=cell division protein FtsB;protein_id=OFQ20981.1;transl_table=11 KV814705.1 Genbank gene 91433 92116 . + . ID=gene-HMPREF2948_00620;Name=HMPREF2948_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00620 KV814705.1 Protein Homology CDS 91433 92116 . + 0 ID=cds-OFQ20982.1;Parent=gene-HMPREF2948_00620;Dbxref=NCBI_GP:OFQ20982.1;Name=OFQ20982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698897.1;locus_tag=HMPREF2948_00620;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=OFQ20982.1;transl_table=11 KV814705.1 Genbank gene 92113 92589 . + . ID=gene-HMPREF2948_00625;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=HMPREF2948_00625 KV814705.1 Protein Homology CDS 92113 92589 . + 0 ID=cds-OFQ20983.1;Parent=gene-HMPREF2948_00625;Dbxref=NCBI_GP:OFQ20983.1;Name=OFQ20983.1;Note=catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate;gbkey=CDS;gene=ispF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695062.1;locus_tag=HMPREF2948_00625;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=OFQ20983.1;transl_table=11 KV814705.1 Genbank gene 92652 93035 . - . ID=gene-HMPREF2948_00630;Name=HMPREF2948_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00630 KV814705.1 Protein Homology CDS 92652 93035 . - 0 ID=cds-OFQ20984.1;Parent=gene-HMPREF2948_00630;Dbxref=NCBI_GP:OFQ20984.1;Name=OFQ20984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65QF7.2;locus_tag=HMPREF2948_00630;product=large-conductance mechanosensitive channel MscL;protein_id=OFQ20984.1;transl_table=11 KV814705.1 Genbank gene 93114 94490 . - . ID=gene-HMPREF2948_00635;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=HMPREF2948_00635 KV814705.1 Protein Homology CDS 93114 94490 . - 0 ID=cds-OFQ20985.1;Parent=gene-HMPREF2948_00635;Dbxref=NCBI_GP:OFQ20985.1;Name=OFQ20985.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761121.1;locus_tag=HMPREF2948_00635;product=potassium transporter peripheral membrane component;protein_id=OFQ20985.1;transl_table=11 KV814705.1 Genbank gene 94487 95302 . - . ID=gene-HMPREF2948_00640;Name=HMPREF2948_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00640 KV814705.1 Protein Homology CDS 94487 95302 . - 0 ID=cds-OFQ20986.1;Parent=gene-HMPREF2948_00640;Dbxref=NCBI_GP:OFQ20986.1;Name=OFQ20986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698884.1;locus_tag=HMPREF2948_00640;product=glycosyltransferase;protein_id=OFQ20986.1;transl_table=11 KV814705.1 Genbank gene 95303 96640 . - . ID=gene-HMPREF2948_00645;Name=HMPREF2948_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00645 KV814705.1 Protein Homology CDS 95303 96640 . - 0 ID=cds-OFQ20987.1;Parent=gene-HMPREF2948_00645;Dbxref=NCBI_GP:OFQ20987.1;Name=OFQ20987.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699736.1;locus_tag=HMPREF2948_00645;product=16S rRNA (cytosine(967)-C(5))-methyltransferase;protein_id=OFQ20987.1;transl_table=11 KV814705.1 Genbank gene 96640 97596 . - . ID=gene-HMPREF2948_00650;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=HMPREF2948_00650 KV814705.1 Protein Homology CDS 96640 97596 . - 0 ID=cds-OFQ20988.1;Parent=gene-HMPREF2948_00650;Dbxref=NCBI_GP:OFQ20988.1;Name=OFQ20988.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658672.1;locus_tag=HMPREF2948_00650;product=methionyl-tRNA formyltransferase;protein_id=OFQ20988.1;transl_table=11 KV814705.1 Genbank gene 97656 98165 . - . ID=gene-HMPREF2948_00655;Name=HMPREF2948_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00655 KV814705.1 Protein Homology CDS 97656 98165 . - 0 ID=cds-OFQ20989.1;Parent=gene-HMPREF2948_00655;Dbxref=NCBI_GP:OFQ20989.1;Name=OFQ20989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357237.1;locus_tag=HMPREF2948_00655;product=peptide deformylase;protein_id=OFQ20989.1;transl_table=11 ##sequence-region KV814706.1 1 85541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814706.1 Genbank region 1 85541 . + . ID=KV814706.1:1..85541;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814706.1 Genbank gene 130 684 . - . ID=gene-HMPREF2948_00660;Name=HMPREF2948_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00660 KV814706.1 Protein Homology CDS 130 684 . - 0 ID=cds-OFQ20777.1;Parent=gene-HMPREF2948_00660;Dbxref=NCBI_GP:OFQ20777.1;Name=OFQ20777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688251.1;locus_tag=HMPREF2948_00660;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=OFQ20777.1;transl_table=11 KV814706.1 Genbank gene 859 1896 . + . ID=gene-HMPREF2948_00665;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=HMPREF2948_00665 KV814706.1 Protein Homology CDS 859 1896 . + 0 ID=cds-OFQ20778.1;Parent=gene-HMPREF2948_00665;Dbxref=NCBI_GP:OFQ20778.1;Name=OFQ20778.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692764.1;locus_tag=HMPREF2948_00665;product=DL-methionine transporter ATP-binding subunit;protein_id=OFQ20778.1;transl_table=11 KV814706.1 Genbank gene 1886 2578 . + . ID=gene-HMPREF2948_00670;Name=HMPREF2948_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00670 KV814706.1 Protein Homology CDS 1886 2578 . + 0 ID=cds-OFQ20779.1;Parent=gene-HMPREF2948_00670;Dbxref=NCBI_GP:OFQ20779.1;Name=OFQ20779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648554.1;locus_tag=HMPREF2948_00670;product=methionine ABC transporter permease;protein_id=OFQ20779.1;transl_table=11 KV814706.1 Genbank gene 2618 3448 . + . ID=gene-HMPREF2948_00675;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=HMPREF2948_00675 KV814706.1 Protein Homology CDS 2618 3448 . + 0 ID=cds-OFQ20780.1;Parent=gene-HMPREF2948_00675;Dbxref=NCBI_GP:OFQ20780.1;Name=OFQ20780.1;gbkey=CDS;gene=metQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500267.1;locus_tag=HMPREF2948_00675;product=DL-methionine transporter substrate-binding subunit;protein_id=OFQ20780.1;transl_table=11 KV814706.1 Genbank gene 3635 7885 . - . ID=gene-HMPREF2948_00680;Name=HMPREF2948_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00680 KV814706.1 Protein Homology CDS 3635 7885 . - 0 ID=cds-OFQ20781.1;Parent=gene-HMPREF2948_00680;Dbxref=NCBI_GP:OFQ20781.1;Name=OFQ20781.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0URZ7.1;locus_tag=HMPREF2948_00680;product=DNA-directed RNA polymerase subunit beta';protein_id=OFQ20781.1;transl_table=11 KV814706.1 Genbank gene 8009 12037 . - . ID=gene-HMPREF2948_00685;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=HMPREF2948_00685 KV814706.1 Protein Homology CDS 8009 12037 . - 0 ID=cds-OFQ20782.1;Parent=gene-HMPREF2948_00685;Dbxref=NCBI_GP:OFQ20782.1;Name=OFQ20782.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007242344.1;locus_tag=HMPREF2948_00685;product=DNA-directed RNA polymerase subunit beta;protein_id=OFQ20782.1;transl_table=11 KV814706.1 Genbank gene 12335 12706 . - . ID=gene-HMPREF2948_00690;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=HMPREF2948_00690 KV814706.1 Protein Homology CDS 12335 12706 . - 0 ID=cds-OFQ20783.1;Parent=gene-HMPREF2948_00690;Dbxref=NCBI_GP:OFQ20783.1;Name=OFQ20783.1;Note=present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors;gbkey=CDS;gene=rplL;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N319.1;locus_tag=HMPREF2948_00690;product=50S ribosomal protein L7/L12;protein_id=OFQ20783.1;transl_table=11 KV814706.1 Genbank gene 12761 13252 . - . ID=gene-HMPREF2948_00695;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=HMPREF2948_00695 KV814706.1 Protein Homology CDS 12761 13252 . - 0 ID=cds-OFQ20784.1;Parent=gene-HMPREF2948_00695;Dbxref=NCBI_GP:OFQ20784.1;Name=OFQ20784.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694693.1;locus_tag=HMPREF2948_00695;product=50S ribosomal protein L10;protein_id=OFQ20784.1;transl_table=11 KV814706.1 Genbank gene 13565 13984 . - . ID=gene-HMPREF2948_00700;Name=HMPREF2948_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00700 KV814706.1 Protein Homology CDS 13565 13984 . - 0 ID=cds-OFQ20785.1;Parent=gene-HMPREF2948_00700;Dbxref=NCBI_GP:OFQ20785.1;Name=OFQ20785.1;Note=has endoribonuclease activity on mRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201340.1;locus_tag=HMPREF2948_00700;product=reactive intermediate/imine deaminase;protein_id=OFQ20785.1;transl_table=11 KV814706.1 Genbank gene 14052 14798 . - . ID=gene-HMPREF2948_00705;Name=HMPREF2948_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00705 KV814706.1 Protein Homology CDS 14052 14798 . - 0 ID=cds-OFQ20786.1;Parent=gene-HMPREF2948_00705;Dbxref=NCBI_GP:OFQ20786.1;Name=OFQ20786.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658614.1;locus_tag=HMPREF2948_00705;product=hypothetical protein;protein_id=OFQ20786.1;transl_table=11 KV814706.1 Genbank gene 14999 15622 . - . ID=gene-HMPREF2948_00710;Name=HMPREF2948_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00710 KV814706.1 Protein Homology CDS 14999 15622 . - 0 ID=cds-OFQ20787.1;Parent=gene-HMPREF2948_00710;Dbxref=NCBI_GP:OFQ20787.1;Name=OFQ20787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700166.1;locus_tag=HMPREF2948_00710;product=hypothetical protein;protein_id=OFQ20787.1;transl_table=11 KV814706.1 Genbank gene 15819 16772 . - . ID=gene-HMPREF2948_00715;Name=HMPREF2948_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00715 KV814706.1 Protein Homology CDS 15819 16772 . - 0 ID=cds-OFQ20788.1;Parent=gene-HMPREF2948_00715;Dbxref=NCBI_GP:OFQ20788.1;Name=OFQ20788.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357226.1;locus_tag=HMPREF2948_00715;product=transaldolase;protein_id=OFQ20788.1;transl_table=11 KV814706.1 Genbank gene 17065 17514 . + . ID=gene-HMPREF2948_00720;Name=HMPREF2948_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00720 KV814706.1 GeneMarkS+ CDS 17065 17514 . + 0 ID=cds-OFQ20789.1;Parent=gene-HMPREF2948_00720;Dbxref=NCBI_GP:OFQ20789.1;Name=OFQ20789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00720;product=hypothetical protein;protein_id=OFQ20789.1;transl_table=11 KV814706.1 Genbank gene 17483 17695 . + . ID=gene-HMPREF2948_00725;Name=HMPREF2948_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00725 KV814706.1 GeneMarkS+ CDS 17483 17695 . + 0 ID=cds-OFQ20790.1;Parent=gene-HMPREF2948_00725;Dbxref=NCBI_GP:OFQ20790.1;Name=OFQ20790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00725;product=hypothetical protein;protein_id=OFQ20790.1;transl_table=11 KV814706.1 Genbank gene 17692 18690 . + . ID=gene-HMPREF2948_00730;Name=HMPREF2948_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00730 KV814706.1 Protein Homology CDS 17692 18690 . + 0 ID=cds-OFQ20791.1;Parent=gene-HMPREF2948_00730;Dbxref=NCBI_GP:OFQ20791.1;Name=OFQ20791.1;Note=with OppABCD is involved in the transport of oligopeptides%3B OppF and OppD are ATP-binding proteins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700062.1;locus_tag=HMPREF2948_00730;product=peptide ABC transporter ATP-binding protein;protein_id=OFQ20791.1;transl_table=11 KV814706.1 Genbank gene 18730 19599 . - . ID=gene-HMPREF2948_00735;Name=HMPREF2948_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00735 KV814706.1 Protein Homology CDS 18730 19599 . - 0 ID=cds-OFQ20792.1;Parent=gene-HMPREF2948_00735;Dbxref=NCBI_GP:OFQ20792.1;Name=OFQ20792.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064662.1;locus_tag=HMPREF2948_00735;product=hypothetical protein;protein_id=OFQ20792.1;transl_table=11 KV814706.1 Genbank gene 19714 20328 . + . ID=gene-HMPREF2948_00740;Name=HMPREF2948_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00740 KV814706.1 Protein Homology CDS 19714 20328 . + 0 ID=cds-OFQ20793.1;Parent=gene-HMPREF2948_00740;Dbxref=NCBI_GP:OFQ20793.1;Name=OFQ20793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P46453.1;locus_tag=HMPREF2948_00740;product=YihA family ribosome biogenesis GTP-binding protein;protein_id=OFQ20793.1;transl_table=11 KV814706.1 Genbank gene 20458 21987 . + . ID=gene-HMPREF2948_00745;Name=HMPREF2948_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00745 KV814706.1 Protein Homology CDS 20458 21987 . + 0 ID=cds-OFQ20794.1;Parent=gene-HMPREF2948_00745;Dbxref=NCBI_GP:OFQ20794.1;Name=OFQ20794.1;Note=among the AAA+ ATPases%2C the YifB protease family belongs to the Helix 2 insert clade%3B unknown function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697391.1;locus_tag=HMPREF2948_00745;product=ATP-dependent protease;protein_id=OFQ20794.1;transl_table=11 KV814706.1 Genbank gene 22031 22615 . - . ID=gene-HMPREF2948_00750;Name=HMPREF2948_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00750 KV814706.1 Protein Homology CDS 22031 22615 . - 0 ID=cds-OFQ20795.1;Parent=gene-HMPREF2948_00750;Dbxref=NCBI_GP:OFQ20795.1;Name=OFQ20795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005539159.1;locus_tag=HMPREF2948_00750;product=Fe-S biogenesis protein NfuA;protein_id=OFQ20795.1;transl_table=11 KV814706.1 Genbank gene 22731 23420 . - . ID=gene-HMPREF2948_00755;Name=HMPREF2948_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00755 KV814706.1 Protein Homology CDS 22731 23420 . - 0 ID=cds-OFQ20848.1;Parent=gene-HMPREF2948_00755;Dbxref=NCBI_GP:OFQ20848.1;Name=OFQ20848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697373.1;locus_tag=HMPREF2948_00755;product=competence protein ComF;protein_id=OFQ20848.1;transl_table=11 KV814706.1 Genbank gene 23440 24780 . - . ID=gene-HMPREF2948_00760;Name=HMPREF2948_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00760 KV814706.1 Protein Homology CDS 23440 24780 . - 0 ID=cds-OFQ20849.1;Parent=gene-HMPREF2948_00760;Dbxref=NCBI_GP:OFQ20849.1;Name=OFQ20849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704482.1;locus_tag=HMPREF2948_00760;product=secretin;protein_id=OFQ20849.1;transl_table=11 KV814706.1 Genbank gene 24824 25207 . - . ID=gene-HMPREF2948_00765;Name=HMPREF2948_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00765 KV814706.1 Protein Homology CDS 24824 25207 . - 0 ID=cds-OFQ20796.1;Parent=gene-HMPREF2948_00765;Dbxref=NCBI_GP:OFQ20796.1;Name=OFQ20796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697438.1;locus_tag=HMPREF2948_00765;product=hypothetical protein;protein_id=OFQ20796.1;transl_table=11 KV814706.1 Genbank gene 25207 25749 . - . ID=gene-HMPREF2948_00770;Name=HMPREF2948_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00770 KV814706.1 Protein Homology CDS 25207 25749 . - 0 ID=cds-OFQ20797.1;Parent=gene-HMPREF2948_00770;Dbxref=NCBI_GP:OFQ20797.1;Name=OFQ20797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697410.1;locus_tag=HMPREF2948_00770;product=competence protein ComC;protein_id=OFQ20797.1;transl_table=11 KV814706.1 Genbank gene 25746 26258 . - . ID=gene-HMPREF2948_00775;Name=HMPREF2948_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00775 KV814706.1 Protein Homology CDS 25746 26258 . - 0 ID=cds-OFQ20798.1;Parent=gene-HMPREF2948_00775;Dbxref=NCBI_GP:OFQ20798.1;Name=OFQ20798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697404.1;locus_tag=HMPREF2948_00775;product=competence protein ComB;protein_id=OFQ20798.1;transl_table=11 KV814706.1 Genbank gene 26245 27093 . - . ID=gene-HMPREF2948_00780;Name=HMPREF2948_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00780 KV814706.1 Protein Homology CDS 26245 27093 . - 0 ID=cds-OFQ20799.1;Parent=gene-HMPREF2948_00780;Dbxref=NCBI_GP:OFQ20799.1;Name=OFQ20799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697386.1;locus_tag=HMPREF2948_00780;product=competence protein ComA;protein_id=OFQ20799.1;transl_table=11 KV814706.1 Genbank gene 27193 29811 . + . ID=gene-HMPREF2948_00785;Name=HMPREF2948_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00785 KV814706.1 Protein Homology CDS 27193 29811 . + 0 ID=cds-OFQ20800.1;Parent=gene-HMPREF2948_00785;Dbxref=NCBI_GP:OFQ20800.1;Name=OFQ20800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272051.1;locus_tag=HMPREF2948_00785;product=penicillin-binding protein;protein_id=OFQ20800.1;transl_table=11 KV814706.1 Genbank gene 29878 30723 . + . ID=gene-HMPREF2948_00790;Name=HMPREF2948_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00790 KV814706.1 Protein Homology CDS 29878 30723 . + 0 ID=cds-OFQ20801.1;Parent=gene-HMPREF2948_00790;Dbxref=NCBI_GP:OFQ20801.1;Name=OFQ20801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006663048.1;locus_tag=HMPREF2948_00790;product=rRNA methyltransferase;protein_id=OFQ20801.1;transl_table=11 KV814706.1 Genbank gene 30759 31175 . - . ID=gene-HMPREF2948_00795;Name=HMPREF2948_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00795 KV814706.1 Protein Homology CDS 30759 31175 . - 0 ID=cds-OFQ20802.1;Parent=gene-HMPREF2948_00795;Dbxref=NCBI_GP:OFQ20802.1;Name=OFQ20802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064650.1;locus_tag=HMPREF2948_00795;product=phosphate-starvation-inducible protein PsiE;protein_id=OFQ20802.1;transl_table=11 KV814706.1 Genbank gene 31310 33199 . - . ID=gene-HMPREF2948_00800;Name=HMPREF2948_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00800 KV814706.1 Protein Homology CDS 31310 33199 . - 0 ID=cds-OFQ20803.1;Parent=gene-HMPREF2948_00800;Dbxref=NCBI_GP:OFQ20803.1;Name=OFQ20803.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055083.1;locus_tag=HMPREF2948_00800;product=RNA polymerase sigma factor RpoD;protein_id=OFQ20803.1;transl_table=11 KV814706.1 Genbank gene 33269 35053 . - . ID=gene-HMPREF2948_00805;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=HMPREF2948_00805 KV814706.1 Protein Homology CDS 33269 35053 . - 0 ID=cds-OFQ20804.1;Parent=gene-HMPREF2948_00805;Dbxref=NCBI_GP:OFQ20804.1;Name=OFQ20804.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064648.1;locus_tag=HMPREF2948_00805;product=DNA primase;protein_id=OFQ20804.1;transl_table=11 KV814706.1 Genbank gene 35190 35405 . - . ID=gene-HMPREF2948_00810;Name=HMPREF2948_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00810 KV814706.1 Protein Homology CDS 35190 35405 . - 0 ID=cds-OFQ20805.1;Parent=gene-HMPREF2948_00810;Dbxref=NCBI_GP:OFQ20805.1;Name=OFQ20805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627632.1;locus_tag=HMPREF2948_00810;product=30S ribosomal protein S21;protein_id=OFQ20805.1;transl_table=11 KV814706.1 Genbank gene 35624 36652 . + . ID=gene-HMPREF2948_00815;Name=HMPREF2948_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00815 KV814706.1 Protein Homology CDS 35624 36652 . + 0 ID=cds-OFQ20806.1;Parent=gene-HMPREF2948_00815;Dbxref=NCBI_GP:OFQ20806.1;Name=OFQ20806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0USH5.1;locus_tag=HMPREF2948_00815;product=N(6)-L-threonylcarbamoyladenine synthase TsaD;protein_id=OFQ20806.1;transl_table=11 KV814706.1 Genbank gene 36662 36898 . + . ID=gene-HMPREF2948_00820;Name=HMPREF2948_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00820 KV814706.1 Protein Homology CDS 36662 36898 . + 0 ID=cds-OFQ20807.1;Parent=gene-HMPREF2948_00820;Dbxref=NCBI_GP:OFQ20807.1;Name=OFQ20807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005734335.1;locus_tag=HMPREF2948_00820;product=hypothetical protein;protein_id=OFQ20807.1;transl_table=11 KV814706.1 Genbank gene 36898 37479 . + . ID=gene-HMPREF2948_00825;Name=HMPREF2948_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00825 KV814706.1 Protein Homology CDS 36898 37479 . + 0 ID=cds-OFQ20808.1;Parent=gene-HMPREF2948_00825;Dbxref=NCBI_GP:OFQ20808.1;Name=OFQ20808.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526416.1;locus_tag=HMPREF2948_00825;product=thymidine kinase;protein_id=OFQ20808.1;transl_table=11 KV814706.1 Genbank gene 37516 38736 . + . ID=gene-HMPREF2948_00830;Name=HMPREF2948_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00830 KV814706.1 Protein Homology CDS 37516 38736 . + 0 ID=cds-OFQ20809.1;Parent=gene-HMPREF2948_00830;Dbxref=NCBI_GP:OFQ20809.1;Name=OFQ20809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995196.1;locus_tag=HMPREF2948_00830;product=tyrosine transporter;protein_id=OFQ20809.1;transl_table=11 KV814706.1 Genbank gene 38819 40831 . - . ID=gene-HMPREF2948_00835;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=HMPREF2948_00835 KV814706.1 Protein Homology CDS 38819 40831 . - 0 ID=cds-OFQ20850.1;Parent=gene-HMPREF2948_00835;Dbxref=NCBI_GP:OFQ20850.1;Name=OFQ20850.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665886.1;locus_tag=HMPREF2948_00835;product=DNA ligase (NAD(+)) LigA;protein_id=OFQ20850.1;transl_table=11 KV814706.1 Genbank gene 40911 41945 . - . ID=gene-HMPREF2948_00840;Name=HMPREF2948_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00840 KV814706.1 Protein Homology CDS 40911 41945 . - 0 ID=cds-OFQ20810.1;Parent=gene-HMPREF2948_00840;Dbxref=NCBI_GP:OFQ20810.1;Name=OFQ20810.1;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694741.1;locus_tag=HMPREF2948_00840;product=cell division protein ZipA;protein_id=OFQ20810.1;transl_table=11 KV814706.1 Genbank gene 42116 42961 . + . ID=gene-HMPREF2948_00845;Name=HMPREF2948_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00845 KV814706.1 Protein Homology CDS 42116 42961 . + 0 ID=cds-OFQ20811.1;Parent=gene-HMPREF2948_00845;Dbxref=NCBI_GP:OFQ20811.1;Name=OFQ20811.1;Note=role in sulfur assimilation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064640.1;locus_tag=HMPREF2948_00845;product=sulfate transporter CysZ;protein_id=OFQ20811.1;transl_table=11 KV814706.1 Genbank gene 43062 44012 . + . ID=gene-HMPREF2948_00850;Name=HMPREF2948_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00850 KV814706.1 Protein Homology CDS 43062 44012 . + 0 ID=cds-OFQ20812.1;Parent=gene-HMPREF2948_00850;Dbxref=NCBI_GP:OFQ20812.1;Name=OFQ20812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356538.1;locus_tag=HMPREF2948_00850;product=cysteine synthase A;protein_id=OFQ20812.1;transl_table=11 KV814706.1 Genbank gene 44196 44969 . + . ID=gene-HMPREF2948_00855;Name=HMPREF2948_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00855 KV814706.1 Protein Homology CDS 44196 44969 . + 0 ID=cds-OFQ20813.1;Parent=gene-HMPREF2948_00855;Dbxref=NCBI_GP:OFQ20813.1;Name=OFQ20813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686368.1;locus_tag=HMPREF2948_00855;product=amino acid ABC transporter substrate-binding protein;protein_id=OFQ20813.1;transl_table=11 KV814706.1 Genbank gene 44953 45669 . + . ID=gene-HMPREF2948_00860;Name=HMPREF2948_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00860 KV814706.1 Protein Homology CDS 44953 45669 . + 0 ID=cds-OFQ20814.1;Parent=gene-HMPREF2948_00860;Dbxref=NCBI_GP:OFQ20814.1;Name=OFQ20814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633396.1;locus_tag=HMPREF2948_00860;product=cysteine ABC transporter permease;protein_id=OFQ20814.1;transl_table=11 KV814706.1 Genbank gene 45679 46449 . + . ID=gene-HMPREF2948_00865;Name=HMPREF2948_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00865 KV814706.1 Protein Homology CDS 45679 46449 . + 0 ID=cds-OFQ20815.1;Parent=gene-HMPREF2948_00865;Dbxref=NCBI_GP:OFQ20815.1;Name=OFQ20815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633394.1;locus_tag=HMPREF2948_00865;product=polar amino acid ABC transporter ATP-binding protein;protein_id=OFQ20815.1;transl_table=11 KV814706.1 Genbank gene 46519 47262 . - . ID=gene-HMPREF2948_00870;Name=HMPREF2948_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00870 KV814706.1 Protein Homology CDS 46519 47262 . - 0 ID=cds-OFQ20816.1;Parent=gene-HMPREF2948_00870;Dbxref=NCBI_GP:OFQ20816.1;Name=OFQ20816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697447.1;locus_tag=HMPREF2948_00870;product=aquaporin;protein_id=OFQ20816.1;transl_table=11 KV814706.1 Genbank gene 47635 49146 . + . ID=gene-HMPREF2948_00875;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=HMPREF2948_00875 KV814706.1 Protein Homology CDS 47635 49146 . + 0 ID=cds-OFQ20817.1;Parent=gene-HMPREF2948_00875;Dbxref=NCBI_GP:OFQ20817.1;Name=OFQ20817.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005825787.1;locus_tag=HMPREF2948_00875;product=glycerol kinase;protein_id=OFQ20817.1;transl_table=11 KV814706.1 Genbank gene 49217 49600 . - . ID=gene-HMPREF2948_00880;Name=HMPREF2948_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00880 KV814706.1 Protein Homology CDS 49217 49600 . - 0 ID=cds-OFQ20818.1;Parent=gene-HMPREF2948_00880;Dbxref=NCBI_GP:OFQ20818.1;Name=OFQ20818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697445.1;locus_tag=HMPREF2948_00880;product=hypothetical protein;protein_id=OFQ20818.1;transl_table=11 KV814706.1 Genbank gene 49703 52015 . - . ID=gene-HMPREF2948_00885;Name=HMPREF2948_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00885 KV814706.1 Protein Homology CDS 49703 52015 . - 0 ID=cds-OFQ20819.1;Parent=gene-HMPREF2948_00885;Dbxref=NCBI_GP:OFQ20819.1;Name=OFQ20819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697424.1;locus_tag=HMPREF2948_00885;product=RNA-binding transcriptional accessory protein;protein_id=OFQ20819.1;transl_table=11 KV814706.1 Genbank gene 52122 52598 . + . ID=gene-HMPREF2948_00890;Name=HMPREF2948_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00890 KV814706.1 Protein Homology CDS 52122 52598 . + 0 ID=cds-OFQ20820.1;Parent=gene-HMPREF2948_00890;Dbxref=NCBI_GP:OFQ20820.1;Name=OFQ20820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694166.1;locus_tag=HMPREF2948_00890;product=transcription elongation factor GreB;protein_id=OFQ20820.1;transl_table=11 KV814706.1 Genbank gene 52670 53386 . - . ID=gene-HMPREF2948_00895;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=HMPREF2948_00895 KV814706.1 Protein Homology CDS 52670 53386 . - 0 ID=cds-OFQ20821.1;Parent=gene-HMPREF2948_00895;Dbxref=NCBI_GP:OFQ20821.1;Name=OFQ20821.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694768.1;locus_tag=HMPREF2948_00895;product=purine-nucleoside phosphorylase;protein_id=OFQ20821.1;transl_table=11 KV814706.1 Genbank gene 53515 54765 . - . ID=gene-HMPREF2948_00900;Name=HMPREF2948_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00900 KV814706.1 Protein Homology CDS 53515 54765 . - 0 ID=cds-OFQ20822.1;Parent=gene-HMPREF2948_00900;Dbxref=NCBI_GP:OFQ20822.1;Name=OFQ20822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44742.1;locus_tag=HMPREF2948_00900;product=nucleoside transporter NupC;protein_id=OFQ20822.1;transl_table=11 KV814706.1 Genbank gene 54871 55659 . - . ID=gene-HMPREF2948_00905;Name=HMPREF2948_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00905 KV814706.1 Protein Homology CDS 54871 55659 . - 0 ID=cds-OFQ20823.1;Parent=gene-HMPREF2948_00905;Dbxref=NCBI_GP:OFQ20823.1;Name=OFQ20823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694124.1;locus_tag=HMPREF2948_00905;product=radical SAM protein;protein_id=OFQ20823.1;transl_table=11 KV814706.1 Genbank gene 55692 55982 . - . ID=gene-HMPREF2948_00910;Name=HMPREF2948_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00910 KV814706.1 Protein Homology CDS 55692 55982 . - 0 ID=cds-OFQ20824.1;Parent=gene-HMPREF2948_00910;Dbxref=NCBI_GP:OFQ20824.1;Name=OFQ20824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44027.1;locus_tag=HMPREF2948_00910;product=hypothetical protein;protein_id=OFQ20824.1;transl_table=11 KV814706.1 Genbank gene 56038 57042 . - . ID=gene-HMPREF2948_00915;Name=HMPREF2948_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00915 KV814706.1 Protein Homology CDS 56038 57042 . - 0 ID=cds-OFQ20825.1;Parent=gene-HMPREF2948_00915;Dbxref=NCBI_GP:OFQ20825.1;Name=OFQ20825.1;Note=catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43835.1;locus_tag=HMPREF2948_00915;product=tryptophan--tRNA ligase;protein_id=OFQ20825.1;transl_table=11 KV814706.1 Genbank gene 57183 57806 . + . ID=gene-HMPREF2948_00920;Name=HMPREF2948_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00920 KV814706.1 Protein Homology CDS 57183 57806 . + 0 ID=cds-OFQ20851.1;Parent=gene-HMPREF2948_00920;Dbxref=NCBI_GP:OFQ20851.1;Name=OFQ20851.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694773.1;locus_tag=HMPREF2948_00920;product=lysogenization protein HflD;protein_id=OFQ20851.1;transl_table=11 KV814706.1 Genbank gene 57823 59190 . + . ID=gene-HMPREF2948_00925;Name=HMPREF2948_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00925 KV814706.1 Protein Homology CDS 57823 59190 . + 0 ID=cds-OFQ20826.1;Parent=gene-HMPREF2948_00925;Dbxref=NCBI_GP:OFQ20826.1;Name=OFQ20826.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356283.1;locus_tag=HMPREF2948_00925;product=adenylosuccinate lyase;protein_id=OFQ20826.1;transl_table=11 KV814706.1 Genbank gene 59297 59710 . - . ID=gene-HMPREF2948_00930;Name=HMPREF2948_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00930 KV814706.1 Protein Homology CDS 59297 59710 . - 0 ID=cds-OFQ20827.1;Parent=gene-HMPREF2948_00930;Dbxref=NCBI_GP:OFQ20827.1;Name=OFQ20827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697378.1;locus_tag=HMPREF2948_00930;product=hypothetical protein;protein_id=OFQ20827.1;transl_table=11 KV814706.1 Genbank gene 59774 60829 . - . ID=gene-HMPREF2948_00935;Name=HMPREF2948_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00935 KV814706.1 Protein Homology CDS 59774 60829 . - 0 ID=cds-OFQ20828.1;Parent=gene-HMPREF2948_00935;Dbxref=NCBI_GP:OFQ20828.1;Name=OFQ20828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064624.1;locus_tag=HMPREF2948_00935;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=OFQ20828.1;transl_table=11 KV814706.1 Genbank gene 60993 62288 . + . ID=gene-HMPREF2948_00940;Name=HMPREF2948_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00940 KV814706.1 Protein Homology CDS 60993 62288 . + 0 ID=cds-OFQ20829.1;Parent=gene-HMPREF2948_00940;Dbxref=NCBI_GP:OFQ20829.1;Name=OFQ20829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005825231.1;locus_tag=HMPREF2948_00940;product=oxidoreductase;protein_id=OFQ20829.1;transl_table=11 KV814706.1 Genbank gene 62340 62792 . - . ID=gene-HMPREF2948_00945;Name=HMPREF2948_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00945 KV814706.1 Protein Homology CDS 62340 62792 . - 0 ID=cds-OFQ20830.1;Parent=gene-HMPREF2948_00945;Dbxref=NCBI_GP:OFQ20830.1;Name=OFQ20830.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649540.1;locus_tag=HMPREF2948_00945;product=transcriptional regulator;protein_id=OFQ20830.1;transl_table=11 KV814706.1 Genbank gene 62948 63940 . + . ID=gene-HMPREF2948_00950;Name=HMPREF2948_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00950 KV814706.1 Protein Homology CDS 62948 63940 . + 0 ID=cds-OFQ20831.1;Parent=gene-HMPREF2948_00950;Dbxref=NCBI_GP:OFQ20831.1;Name=OFQ20831.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006248982.1;locus_tag=HMPREF2948_00950;product=asparagine synthetase A;protein_id=OFQ20831.1;transl_table=11 KV814706.1 Genbank gene 64001 65092 . - . ID=gene-HMPREF2948_00955;Name=HMPREF2948_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00955 KV814706.1 Protein Homology CDS 64001 65092 . - 0 ID=cds-OFQ20832.1;Parent=gene-HMPREF2948_00955;Dbxref=NCBI_GP:OFQ20832.1;Name=OFQ20832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019518416.1;locus_tag=HMPREF2948_00955;product=transporter;protein_id=OFQ20832.1;transl_table=11 KV814706.1 Genbank gene 65164 66441 . - . ID=gene-HMPREF2948_00960;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=HMPREF2948_00960 KV814706.1 Protein Homology CDS 65164 66441 . - 0 ID=cds-OFQ20833.1;Parent=gene-HMPREF2948_00960;Dbxref=NCBI_GP:OFQ20833.1;Name=OFQ20833.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064620.1;locus_tag=HMPREF2948_00960;product=glycerol-3-phosphate dehydrogenase%2C anaerobic%2C C subunit;protein_id=OFQ20833.1;transl_table=11 KV814706.1 Genbank gene 66451 67740 . - . ID=gene-HMPREF2948_00965;Name=HMPREF2948_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00965 KV814706.1 Protein Homology CDS 66451 67740 . - 0 ID=cds-OFQ20834.1;Parent=gene-HMPREF2948_00965;Dbxref=NCBI_GP:OFQ20834.1;Name=OFQ20834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064619.1;locus_tag=HMPREF2948_00965;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=OFQ20834.1;transl_table=11 KV814706.1 Genbank gene 67730 69421 . - . ID=gene-HMPREF2948_00970;Name=HMPREF2948_00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00970 KV814706.1 Protein Homology CDS 67730 69421 . - 0 ID=cds-OFQ20835.1;Parent=gene-HMPREF2948_00970;Dbxref=NCBI_GP:OFQ20835.1;Name=OFQ20835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694610.1;locus_tag=HMPREF2948_00970;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=OFQ20835.1;transl_table=11 KV814706.1 Genbank gene 69713 71155 . + . ID=gene-HMPREF2948_00975;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=HMPREF2948_00975 KV814706.1 Protein Homology CDS 69713 71155 . + 0 ID=cds-OFQ20836.1;Parent=gene-HMPREF2948_00975;Dbxref=NCBI_GP:OFQ20836.1;Name=OFQ20836.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650782.1;locus_tag=HMPREF2948_00975;product=glycerol-3-phosphate transporter;protein_id=OFQ20836.1;transl_table=11 KV814706.1 Genbank gene 71250 72161 . + . ID=gene-HMPREF2948_00980;Name=HMPREF2948_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00980 KV814706.1 Protein Homology CDS 71250 72161 . + 0 ID=cds-OFQ20837.1;Parent=gene-HMPREF2948_00980;Dbxref=NCBI_GP:OFQ20837.1;Name=OFQ20837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064616.1;locus_tag=HMPREF2948_00980;product=hypothetical protein;protein_id=OFQ20837.1;transl_table=11 KV814706.1 Genbank gene 72179 73264 . + . ID=gene-HMPREF2948_00985;Name=HMPREF2948_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00985 KV814706.1 Protein Homology CDS 72179 73264 . + 0 ID=cds-OFQ20838.1;Parent=gene-HMPREF2948_00985;Dbxref=NCBI_GP:OFQ20838.1;Name=OFQ20838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014702339.1;locus_tag=HMPREF2948_00985;product=glycerophosphoryl diester phosphodiesterase;protein_id=OFQ20838.1;transl_table=11 KV814706.1 Genbank gene 73377 74267 . - . ID=gene-HMPREF2948_00990;Name=HMPREF2948_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00990 KV814706.1 GeneMarkS+ CDS 73377 74267 . - 0 ID=cds-OFQ20839.1;Parent=gene-HMPREF2948_00990;Dbxref=NCBI_GP:OFQ20839.1;Name=OFQ20839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_00990;product=hypothetical protein;protein_id=OFQ20839.1;transl_table=11 KV814706.1 Genbank gene 74549 75178 . - . ID=gene-HMPREF2948_00995;Name=HMPREF2948_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_00995 KV814706.1 Protein Homology CDS 74549 75178 . - 0 ID=cds-OFQ20840.1;Parent=gene-HMPREF2948_00995;Dbxref=NCBI_GP:OFQ20840.1;Name=OFQ20840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007527003.1;locus_tag=HMPREF2948_00995;product=hypothetical protein;protein_id=OFQ20840.1;transl_table=11 KV814706.1 Genbank gene 75307 79254 . - . ID=gene-HMPREF2948_01000;Name=HMPREF2948_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01000 KV814706.1 Protein Homology CDS 75307 79254 . - 0 ID=cds-OFQ20841.1;Parent=gene-HMPREF2948_01000;Dbxref=NCBI_GP:OFQ20841.1;Name=OFQ20841.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694794.1;locus_tag=HMPREF2948_01000;product=phosphoribosylformylglycinamidine synthase;protein_id=OFQ20841.1;transl_table=11 KV814706.1 Genbank gene 79429 80226 . + . ID=gene-HMPREF2948_01005;Name=HMPREF2948_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01005 KV814706.1 Protein Homology CDS 79429 80226 . + 0 ID=cds-OFQ20842.1;Parent=gene-HMPREF2948_01005;Dbxref=NCBI_GP:OFQ20842.1;Name=OFQ20842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625648.1;locus_tag=HMPREF2948_01005;product=hypothetical protein;protein_id=OFQ20842.1;transl_table=11 KV814706.1 Genbank gene 80273 80947 . - . ID=gene-HMPREF2948_01010;Name=HMPREF2948_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01010 KV814706.1 Protein Homology CDS 80273 80947 . - 0 ID=cds-OFQ20843.1;Parent=gene-HMPREF2948_01010;Dbxref=NCBI_GP:OFQ20843.1;Name=OFQ20843.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526394.1;locus_tag=HMPREF2948_01010;product=phosphoglycolate phosphatase;protein_id=OFQ20843.1;transl_table=11 KV814706.1 Genbank gene 80960 81631 . - . ID=gene-HMPREF2948_01015;Name=HMPREF2948_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01015 KV814706.1 Protein Homology CDS 80960 81631 . - 0 ID=cds-OFQ20844.1;Parent=gene-HMPREF2948_01015;Dbxref=NCBI_GP:OFQ20844.1;Name=OFQ20844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064307.1;locus_tag=HMPREF2948_01015;product=ribulose-phosphate 3-epimerase;protein_id=OFQ20844.1;transl_table=11 KV814706.1 Genbank gene 81795 83459 . - . ID=gene-HMPREF2948_01020;Name=HMPREF2948_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01020 KV814706.1 Protein Homology CDS 81795 83459 . - 0 ID=cds-OFQ20845.1;Parent=gene-HMPREF2948_01020;Dbxref=NCBI_GP:OFQ20845.1;Name=OFQ20845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694800.1;locus_tag=HMPREF2948_01020;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=OFQ20845.1;transl_table=11 KV814706.1 Genbank gene 83592 83921 . - . ID=gene-HMPREF2948_01025;Name=HMPREF2948_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01025 KV814706.1 Protein Homology CDS 83592 83921 . - 0 ID=cds-OFQ20846.1;Parent=gene-HMPREF2948_01025;Dbxref=NCBI_GP:OFQ20846.1;Name=OFQ20846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005558148.1;locus_tag=HMPREF2948_01025;product=multidrug transporter;protein_id=OFQ20846.1;transl_table=11 KV814706.1 Genbank gene 84274 85062 . - . ID=gene-HMPREF2948_01030;Name=HMPREF2948_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01030 KV814706.1 Protein Homology CDS 84274 85062 . - 0 ID=cds-OFQ20847.1;Parent=gene-HMPREF2948_01030;Dbxref=NCBI_GP:OFQ20847.1;Name=OFQ20847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694807.1;locus_tag=HMPREF2948_01030;product=nucleoside triphosphate hydrolase;protein_id=OFQ20847.1;transl_table=11 KV814706.1 Genbank gene 85163 85238 . - . ID=gene-HMPREF2948_01035;Name=HMPREF2948_01035;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_01035 KV814706.1 tRNAscan-SE tRNA 85163 85238 . - . ID=rna-HMPREF2948_01035;Parent=gene-HMPREF2948_01035;anticodon=(pos:complement(85203..85205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_01035;product=tRNA-Trp KV814706.1 tRNAscan-SE exon 85163 85238 . - . ID=exon-HMPREF2948_01035-1;Parent=rna-HMPREF2948_01035;anticodon=(pos:complement(85203..85205));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_01035;product=tRNA-Trp KV814706.1 Genbank gene 85254 85330 . - . ID=gene-HMPREF2948_01040;Name=HMPREF2948_01040;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_01040 KV814706.1 tRNAscan-SE tRNA 85254 85330 . - . ID=rna-HMPREF2948_01040;Parent=gene-HMPREF2948_01040;anticodon=(pos:complement(85294..85296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_01040;product=tRNA-Asp KV814706.1 tRNAscan-SE exon 85254 85330 . - . ID=exon-HMPREF2948_01040-1;Parent=rna-HMPREF2948_01040;anticodon=(pos:complement(85294..85296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_01040;product=tRNA-Asp KV814706.1 Genbank gene 85345 85460 . - . ID=gene-HMPREF2948_01045;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=HMPREF2948_01045 KV814706.1 cmsearch rRNA 85345 85460 . - . ID=rna-HMPREF2948_01045;Parent=gene-HMPREF2948_01045;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_01045;product=5S ribosomal RNA KV814706.1 cmsearch exon 85345 85460 . - . ID=exon-HMPREF2948_01045-1;Parent=rna-HMPREF2948_01045;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_01045;product=5S ribosomal RNA ##sequence-region KV814707.1 1 383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814707.1 Genbank region 1 383 . + . ID=KV814707.1:1..383;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814707.1 Genbank gene 1 263 . - . ID=gene-HMPREF2948_01050;Name=HMPREF2948_01050;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_01050;partial=true;start_range=.,1 KV814707.1 Genbank rRNA 1 263 . - . ID=rna-HMPREF2948_01050;Parent=gene-HMPREF2948_01050;gbkey=rRNA;locus_tag=HMPREF2948_01050;partial=true;product=23S ribosomal RNA;start_range=.,1 KV814707.1 Genbank exon 1 263 . - . ID=exon-HMPREF2948_01050-1;Parent=rna-HMPREF2948_01050;gbkey=rRNA;locus_tag=HMPREF2948_01050;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region KV814708.1 1 71161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814708.1 Genbank region 1 71161 . + . ID=KV814708.1:1..71161;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814708.1 Genbank pseudogene 1 1612 . - . ID=gene-HMPREF2948_01055;Name=HMPREF2948_01055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_01055;pseudo=true KV814708.1 GeneMarkS+ CDS 1 1612 . - 0 ID=cds-HMPREF2948_01055;Parent=gene-HMPREF2948_01055;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01055;product=hypothetical protein;pseudo=true;transl_table=11 KV814708.1 Genbank gene 1910 1985 . + . ID=gene-HMPREF2948_01060;Name=HMPREF2948_01060;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_01060 KV814708.1 tRNAscan-SE tRNA 1910 1985 . + . ID=rna-HMPREF2948_01060;Parent=gene-HMPREF2948_01060;anticodon=(pos:1943..1945);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_01060;product=tRNA-Asn KV814708.1 tRNAscan-SE exon 1910 1985 . + . ID=exon-HMPREF2948_01060-1;Parent=rna-HMPREF2948_01060;anticodon=(pos:1943..1945);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_01060;product=tRNA-Asn KV814708.1 Genbank gene 2118 2891 . - . ID=gene-HMPREF2948_01065;Name=HMPREF2948_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01065 KV814708.1 Protein Homology CDS 2118 2891 . - 0 ID=cds-OFQ18248.1;Parent=gene-HMPREF2948_01065;Dbxref=NCBI_GP:OFQ18248.1;Name=OFQ18248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697627.1;locus_tag=HMPREF2948_01065;product=TIGR01619 family protein;protein_id=OFQ18248.1;transl_table=11 KV814708.1 Genbank gene 2901 3704 . - . ID=gene-HMPREF2948_01070;Name=HMPREF2948_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01070 KV814708.1 Protein Homology CDS 2901 3704 . - 0 ID=cds-OFQ18249.1;Parent=gene-HMPREF2948_01070;Dbxref=NCBI_GP:OFQ18249.1;Name=OFQ18249.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356007.1;locus_tag=HMPREF2948_01070;product=exodeoxyribonuclease III;protein_id=OFQ18249.1;transl_table=11 KV814708.1 Genbank gene 3937 5247 . + . ID=gene-HMPREF2948_01075;Name=HMPREF2948_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01075 KV814708.1 Protein Homology CDS 3937 5247 . + 0 ID=cds-OFQ18250.1;Parent=gene-HMPREF2948_01075;Dbxref=NCBI_GP:OFQ18250.1;Name=OFQ18250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697618.1;locus_tag=HMPREF2948_01075;product=sodium:proton antiporter;protein_id=OFQ18250.1;transl_table=11 KV814708.1 Genbank gene 5258 5935 . - . ID=gene-HMPREF2948_01080;Name=HMPREF2948_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01080 KV814708.1 Protein Homology CDS 5258 5935 . - 0 ID=cds-OFQ18300.1;Parent=gene-HMPREF2948_01080;Dbxref=NCBI_GP:OFQ18300.1;Name=OFQ18300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697646.1;locus_tag=HMPREF2948_01080;product=RNA pseudouridine synthase;protein_id=OFQ18300.1;transl_table=11 KV814708.1 Genbank gene 5954 7414 . + . ID=gene-HMPREF2948_01085;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=HMPREF2948_01085 KV814708.1 Protein Homology CDS 5954 7414 . + 0 ID=cds-OFQ18251.1;Parent=gene-HMPREF2948_01085;Dbxref=NCBI_GP:OFQ18251.1;Name=OFQ18251.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718092.1;locus_tag=HMPREF2948_01085;product=cardiolipin synthase A;protein_id=OFQ18251.1;transl_table=11 KV814708.1 Genbank gene 7483 9003 . - . ID=gene-HMPREF2948_01090;Name=HMPREF2948_01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01090 KV814708.1 Protein Homology CDS 7483 9003 . - 0 ID=cds-OFQ18252.1;Parent=gene-HMPREF2948_01090;Dbxref=NCBI_GP:OFQ18252.1;Name=OFQ18252.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005754323.1;locus_tag=HMPREF2948_01090;product=Na+/H+ antiporter;protein_id=OFQ18252.1;transl_table=11 KV814708.1 Genbank gene 9541 9945 . + . ID=gene-HMPREF2948_01095;Name=HMPREF2948_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01095 KV814708.1 Protein Homology CDS 9541 9945 . + 0 ID=cds-OFQ18253.1;Parent=gene-HMPREF2948_01095;Dbxref=NCBI_GP:OFQ18253.1;Name=OFQ18253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005716893.1;locus_tag=HMPREF2948_01095;product=DNA-binding protein H-NS-like protein;protein_id=OFQ18253.1;transl_table=11 KV814708.1 Genbank gene 10017 10853 . + . ID=gene-HMPREF2948_01100;Name=HMPREF2948_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01100 KV814708.1 Protein Homology CDS 10017 10853 . + 0 ID=cds-OFQ18254.1;Parent=gene-HMPREF2948_01100;Dbxref=NCBI_GP:OFQ18254.1;Name=OFQ18254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641775.1;locus_tag=HMPREF2948_01100;product=formyltetrahydrofolate deformylase;protein_id=OFQ18254.1;transl_table=11 KV814708.1 Genbank gene 10853 12151 . + . ID=gene-HMPREF2948_01105;Name=HMPREF2948_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01105 KV814708.1 Protein Homology CDS 10853 12151 . + 0 ID=cds-OFQ18255.1;Parent=gene-HMPREF2948_01105;Dbxref=NCBI_GP:OFQ18255.1;Name=OFQ18255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005600893.1;locus_tag=HMPREF2948_01105;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=OFQ18255.1;transl_table=11 KV814708.1 Genbank gene 12193 12849 . - . ID=gene-HMPREF2948_01110;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=HMPREF2948_01110 KV814708.1 Protein Homology CDS 12193 12849 . - 0 ID=cds-OFQ18256.1;Parent=gene-HMPREF2948_01110;Dbxref=NCBI_GP:OFQ18256.1;Name=OFQ18256.1;Note=involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer;gbkey=CDS;gene=folE;inference=EXISTENCE: similar to AA sequence:SwissProt:P57865.1;locus_tag=HMPREF2948_01110;product=GTP cyclohydrolase I;protein_id=OFQ18256.1;transl_table=11 KV814708.1 Genbank gene 13005 14222 . + . ID=gene-HMPREF2948_01115;Name=HMPREF2948_01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01115 KV814708.1 Protein Homology CDS 13005 14222 . + 0 ID=cds-OFQ18257.1;Parent=gene-HMPREF2948_01115;Dbxref=NCBI_GP:OFQ18257.1;Name=OFQ18257.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696299.1;locus_tag=HMPREF2948_01115;product=molybdopterin molybdenumtransferase MoeA;protein_id=OFQ18257.1;transl_table=11 KV814708.1 Genbank gene 14222 14944 . + . ID=gene-HMPREF2948_01120;Name=HMPREF2948_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01120 KV814708.1 Protein Homology CDS 14222 14944 . + 0 ID=cds-OFQ18258.1;Parent=gene-HMPREF2948_01120;Dbxref=NCBI_GP:OFQ18258.1;Name=OFQ18258.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016534526.1;locus_tag=HMPREF2948_01120;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=OFQ18258.1;transl_table=11 KV814708.1 Genbank gene 15177 16400 . + . ID=gene-HMPREF2948_01125;Name=HMPREF2948_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01125 KV814708.1 Protein Homology CDS 15177 16400 . + 0 ID=cds-OFQ18259.1;Parent=gene-HMPREF2948_01125;Dbxref=NCBI_GP:OFQ18259.1;Name=OFQ18259.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708300.1;locus_tag=HMPREF2948_01125;product=hypothetical protein;protein_id=OFQ18259.1;transl_table=11 KV814708.1 Genbank gene 16441 16710 . + . ID=gene-HMPREF2948_01130;Name=HMPREF2948_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01130 KV814708.1 Protein Homology CDS 16441 16710 . + 0 ID=cds-OFQ18260.1;Parent=gene-HMPREF2948_01130;Dbxref=NCBI_GP:OFQ18260.1;Name=OFQ18260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241376.1;locus_tag=HMPREF2948_01130;product=redox protein;protein_id=OFQ18260.1;transl_table=11 KV814708.1 Genbank gene 16835 17152 . - . ID=gene-HMPREF2948_01135;Name=HMPREF2948_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01135 KV814708.1 GeneMarkS+ CDS 16835 17152 . - 0 ID=cds-OFQ18261.1;Parent=gene-HMPREF2948_01135;Dbxref=NCBI_GP:OFQ18261.1;Name=OFQ18261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01135;product=hypothetical protein;protein_id=OFQ18261.1;transl_table=11 KV814708.1 Genbank gene 17256 18635 . - . ID=gene-HMPREF2948_01140;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=HMPREF2948_01140 KV814708.1 Protein Homology CDS 17256 18635 . - 0 ID=cds-OFQ18262.1;Parent=gene-HMPREF2948_01140;Dbxref=NCBI_GP:OFQ18262.1;Name=OFQ18262.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065528.1;locus_tag=HMPREF2948_01140;product=NAD(P) transhydrogenase subunit beta;protein_id=OFQ18262.1;transl_table=11 KV814708.1 Genbank gene 18646 20187 . - . ID=gene-HMPREF2948_01145;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=HMPREF2948_01145 KV814708.1 Protein Homology CDS 18646 20187 . - 0 ID=cds-OFQ18263.1;Parent=gene-HMPREF2948_01145;Dbxref=NCBI_GP:OFQ18263.1;Name=OFQ18263.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525314.1;locus_tag=HMPREF2948_01145;product=NAD(P) transhydrogenase subunit alpha;protein_id=OFQ18263.1;transl_table=11 KV814708.1 Genbank gene 20496 21944 . - . ID=gene-HMPREF2948_01150;Name=HMPREF2948_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01150 KV814708.1 Protein Homology CDS 20496 21944 . - 0 ID=cds-OFQ18264.1;Parent=gene-HMPREF2948_01150;Dbxref=NCBI_GP:OFQ18264.1;Name=OFQ18264.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696309.1;locus_tag=HMPREF2948_01150;product=protein TldD;protein_id=OFQ18264.1;transl_table=11 KV814708.1 Genbank gene 22027 22875 . - . ID=gene-HMPREF2948_01155;Name=HMPREF2948_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01155 KV814708.1 Protein Homology CDS 22027 22875 . - 0 ID=cds-OFQ18265.1;Parent=gene-HMPREF2948_01155;Dbxref=NCBI_GP:OFQ18265.1;Name=OFQ18265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CN04.1;locus_tag=HMPREF2948_01155;product=rRNA (cytidine-2'-O-)-methyltransferase;protein_id=OFQ18265.1;transl_table=11 KV814708.1 Genbank gene 22945 24666 . + . ID=gene-HMPREF2948_01160;Name=HMPREF2948_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01160 KV814708.1 Protein Homology CDS 22945 24666 . + 0 ID=cds-OFQ18266.1;Parent=gene-HMPREF2948_01160;Dbxref=NCBI_GP:OFQ18266.1;Name=OFQ18266.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645073.1;locus_tag=HMPREF2948_01160;product=penicillin-binding protein;protein_id=OFQ18266.1;transl_table=11 KV814708.1 Genbank gene 24670 25029 . + . ID=gene-HMPREF2948_01165;Name=HMPREF2948_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01165 KV814708.1 Protein Homology CDS 24670 25029 . + 0 ID=cds-OFQ18267.1;Parent=gene-HMPREF2948_01165;Dbxref=NCBI_GP:OFQ18267.1;Name=OFQ18267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697285.1;locus_tag=HMPREF2948_01165;product=hypothetical protein;protein_id=OFQ18267.1;transl_table=11 KV814708.1 Genbank gene 25042 25626 . + . ID=gene-HMPREF2948_01170;Name=HMPREF2948_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01170 KV814708.1 Protein Homology CDS 25042 25626 . + 0 ID=cds-OFQ18268.1;Parent=gene-HMPREF2948_01170;Dbxref=NCBI_GP:OFQ18268.1;Name=OFQ18268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P52606.2;locus_tag=HMPREF2948_01170;product=SIS domain-containing protein;protein_id=OFQ18268.1;transl_table=11 KV814708.1 Genbank gene 25711 26292 . + . ID=gene-HMPREF2948_01175;Name=HMPREF2948_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01175 KV814708.1 Protein Homology CDS 25711 26292 . + 0 ID=cds-OFQ18269.1;Parent=gene-HMPREF2948_01175;Dbxref=NCBI_GP:OFQ18269.1;Name=OFQ18269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356745.1;locus_tag=HMPREF2948_01175;product=BON domain-containing protein;protein_id=OFQ18269.1;transl_table=11 KV814708.1 Genbank gene 26567 28837 . + . ID=gene-HMPREF2948_01180;Name=HMPREF2948_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01180 KV814708.1 Protein Homology CDS 26567 28837 . + 0 ID=cds-OFQ18270.1;Parent=gene-HMPREF2948_01180;Dbxref=NCBI_GP:OFQ18270.1;Name=OFQ18270.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356743.1;locus_tag=HMPREF2948_01180;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=OFQ18270.1;transl_table=11 KV814708.1 Genbank gene 28933 30063 . + . ID=gene-HMPREF2948_01185;Name=HMPREF2948_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01185 KV814708.1 Protein Homology CDS 28933 30063 . + 0 ID=cds-OFQ18271.1;Parent=gene-HMPREF2948_01185;Dbxref=NCBI_GP:OFQ18271.1;Name=OFQ18271.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241315.1;locus_tag=HMPREF2948_01185;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=OFQ18271.1;transl_table=11 KV814708.1 Genbank gene 30357 31865 . + . ID=gene-HMPREF2948_01190;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=HMPREF2948_01190 KV814708.1 Protein Homology CDS 30357 31865 . + 0 ID=cds-OFQ18272.1;Parent=gene-HMPREF2948_01190;Dbxref=NCBI_GP:OFQ18272.1;Name=OFQ18272.1;Note=class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1;gbkey=CDS;gene=lysS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UCQ0.1;locus_tag=HMPREF2948_01190;product=lysine--tRNA ligase;protein_id=OFQ18272.1;transl_table=11 KV814708.1 Genbank gene 32003 33148 . - . ID=gene-HMPREF2948_01195;Name=HMPREF2948_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01195 KV814708.1 Protein Homology CDS 32003 33148 . - 0 ID=cds-OFQ18273.1;Parent=gene-HMPREF2948_01195;Dbxref=NCBI_GP:OFQ18273.1;Name=OFQ18273.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651865.1;locus_tag=HMPREF2948_01195;product=methionine synthase;protein_id=OFQ18273.1;transl_table=11 KV814708.1 Genbank gene 33327 34520 . - . ID=gene-HMPREF2948_01200;Name=HMPREF2948_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01200 KV814708.1 Protein Homology CDS 33327 34520 . - 0 ID=cds-OFQ18274.1;Parent=gene-HMPREF2948_01200;Dbxref=NCBI_GP:OFQ18274.1;Name=OFQ18274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05087.1;locus_tag=HMPREF2948_01200;product=hypothetical protein;protein_id=OFQ18274.1;transl_table=11 KV814708.1 Genbank gene 34569 35306 . - . ID=gene-HMPREF2948_01205;Name=HMPREF2948_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01205 KV814708.1 Protein Homology CDS 34569 35306 . - 0 ID=cds-OFQ18275.1;Parent=gene-HMPREF2948_01205;Dbxref=NCBI_GP:OFQ18275.1;Name=OFQ18275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I195.1;locus_tag=HMPREF2948_01205;product=lactam utilization protein LamB;protein_id=OFQ18275.1;transl_table=11 KV814708.1 Genbank gene 35293 36222 . - . ID=gene-HMPREF2948_01210;Name=HMPREF2948_01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01210 KV814708.1 Protein Homology CDS 35293 36222 . - 0 ID=cds-OFQ18276.1;Parent=gene-HMPREF2948_01210;Dbxref=NCBI_GP:OFQ18276.1;Name=OFQ18276.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694216.1;locus_tag=HMPREF2948_01210;product=hypothetical protein;protein_id=OFQ18276.1;transl_table=11 KV814708.1 Genbank gene 36219 36860 . - . ID=gene-HMPREF2948_01215;Name=HMPREF2948_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01215 KV814708.1 Protein Homology CDS 36219 36860 . - 0 ID=cds-OFQ18277.1;Parent=gene-HMPREF2948_01215;Dbxref=NCBI_GP:OFQ18277.1;Name=OFQ18277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694217.1;locus_tag=HMPREF2948_01215;product=hypothetical protein;protein_id=OFQ18277.1;transl_table=11 KV814708.1 Genbank gene 37071 38075 . + . ID=gene-HMPREF2948_01220;Name=HMPREF2948_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01220 KV814708.1 Protein Homology CDS 37071 38075 . + 0 ID=cds-OFQ18278.1;Parent=gene-HMPREF2948_01220;Dbxref=NCBI_GP:OFQ18278.1;Name=OFQ18278.1;Note=catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670545.1;locus_tag=HMPREF2948_01220;product=fructose-bisphosphatase;protein_id=OFQ18278.1;transl_table=11 KV814708.1 Genbank gene 38166 39242 . - . ID=gene-HMPREF2948_01225;Name=HMPREF2948_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01225 KV814708.1 Protein Homology CDS 38166 39242 . - 0 ID=cds-OFQ18301.1;Parent=gene-HMPREF2948_01225;Dbxref=NCBI_GP:OFQ18301.1;Name=OFQ18301.1;Note=with LptABCF is involved in the transport of lipopolysaccharides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011200720.1;locus_tag=HMPREF2948_01225;product=LPS export ABC transporter permease LptG;protein_id=OFQ18301.1;transl_table=11 KV814708.1 Genbank gene 39251 40342 . - . ID=gene-HMPREF2948_01230;Name=HMPREF2948_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01230 KV814708.1 Protein Homology CDS 39251 40342 . - 0 ID=cds-OFQ18279.1;Parent=gene-HMPREF2948_01230;Dbxref=NCBI_GP:OFQ18279.1;Name=OFQ18279.1;Note=with LptBGC is involved in lipopolysaccharide export;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355979.1;locus_tag=HMPREF2948_01230;product=LPS export ABC transporter permease LptF;protein_id=OFQ18279.1;transl_table=11 KV814708.1 Genbank gene 40447 41922 . + . ID=gene-HMPREF2948_01235;Name=HMPREF2948_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01235 KV814708.1 Protein Homology CDS 40447 41922 . + 0 ID=cds-OFQ18280.1;Parent=gene-HMPREF2948_01235;Dbxref=NCBI_GP:OFQ18280.1;Name=OFQ18280.1;Note=catalyzes the removal of N-terminal amino acids preferably from various peptides%3B a cyteinylglycinase%2C transcription regulator and site-specific recombination factor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694194.1;locus_tag=HMPREF2948_01235;product=leucyl aminopeptidase;protein_id=OFQ18280.1;transl_table=11 KV814708.1 Genbank gene 41982 42833 . - . ID=gene-HMPREF2948_01240;Name=HMPREF2948_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01240 KV814708.1 Protein Homology CDS 41982 42833 . - 0 ID=cds-OFQ18281.1;Parent=gene-HMPREF2948_01240;Dbxref=NCBI_GP:OFQ18281.1;Name=OFQ18281.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697280.1;locus_tag=HMPREF2948_01240;product=hypothetical protein;protein_id=OFQ18281.1;transl_table=11 KV814708.1 Genbank gene 43048 43722 . + . ID=gene-HMPREF2948_01245;Name=HMPREF2948_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01245 KV814708.1 Protein Homology CDS 43048 43722 . + 0 ID=cds-OFQ18282.1;Parent=gene-HMPREF2948_01245;Dbxref=NCBI_GP:OFQ18282.1;Name=OFQ18282.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696334.1;locus_tag=HMPREF2948_01245;product=iron-sulfur cluster repair di-iron protein;protein_id=OFQ18282.1;transl_table=11 KV814708.1 Genbank gene 43775 45712 . - . ID=gene-HMPREF2948_01250;Name=HMPREF2948_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01250 KV814708.1 Protein Homology CDS 43775 45712 . - 0 ID=cds-OFQ18302.1;Parent=gene-HMPREF2948_01250;Dbxref=NCBI_GP:OFQ18302.1;Name=OFQ18302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356554.1;locus_tag=HMPREF2948_01250;product=hypothetical protein;protein_id=OFQ18302.1;transl_table=11 KV814708.1 Genbank gene 45859 47133 . - . ID=gene-HMPREF2948_01255;Name=HMPREF2948_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01255 KV814708.1 Protein Homology CDS 45859 47133 . - 0 ID=cds-OFQ18283.1;Parent=gene-HMPREF2948_01255;Dbxref=NCBI_GP:OFQ18283.1;Name=OFQ18283.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697259.1;locus_tag=HMPREF2948_01255;product=malic enzyme;protein_id=OFQ18283.1;transl_table=11 KV814708.1 Genbank gene 47334 47963 . + . ID=gene-HMPREF2948_01260;Name=HMPREF2948_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01260 KV814708.1 Protein Homology CDS 47334 47963 . + 0 ID=cds-OFQ18284.1;Parent=gene-HMPREF2948_01260;Dbxref=NCBI_GP:OFQ18284.1;Name=OFQ18284.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696338.1;locus_tag=HMPREF2948_01260;product=exopolysaccharide biosynthesis protein;protein_id=OFQ18284.1;transl_table=11 KV814708.1 Genbank gene 47973 48671 . + . ID=gene-HMPREF2948_01265;Name=HMPREF2948_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01265 KV814708.1 Protein Homology CDS 47973 48671 . + 0 ID=cds-OFQ18285.1;Parent=gene-HMPREF2948_01265;Dbxref=NCBI_GP:OFQ18285.1;Name=OFQ18285.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995871.1;locus_tag=HMPREF2948_01265;product=16S rRNA pseudouridine(516) synthase;protein_id=OFQ18285.1;transl_table=11 KV814708.1 Genbank gene 48673 49872 . + . ID=gene-HMPREF2948_01270;Name=HMPREF2948_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01270 KV814708.1 Protein Homology CDS 48673 49872 . + 0 ID=cds-OFQ18286.1;Parent=gene-HMPREF2948_01270;Dbxref=NCBI_GP:OFQ18286.1;Name=OFQ18286.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638183.1;locus_tag=HMPREF2948_01270;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=OFQ18286.1;transl_table=11 KV814708.1 Genbank gene 50125 51651 . + . ID=gene-HMPREF2948_01275;Name=HMPREF2948_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01275 KV814708.1 Protein Homology CDS 50125 51651 . + 0 ID=cds-OFQ18287.1;Parent=gene-HMPREF2948_01275;Dbxref=NCBI_GP:OFQ18287.1;Name=OFQ18287.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995588.1;locus_tag=HMPREF2948_01275;product=catalase;protein_id=OFQ18287.1;transl_table=11 KV814708.1 Genbank gene 51731 53170 . - . ID=gene-HMPREF2948_01280;Name=HMPREF2948_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01280 KV814708.1 Protein Homology CDS 51731 53170 . - 0 ID=cds-OFQ18288.1;Parent=gene-HMPREF2948_01280;Dbxref=NCBI_GP:OFQ18288.1;Name=OFQ18288.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011609194.1;locus_tag=HMPREF2948_01280;product=sodium:alanine symporter;protein_id=OFQ18288.1;transl_table=11 KV814708.1 Genbank gene 53307 54224 . - . ID=gene-HMPREF2948_01285;Name=HMPREF2948_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01285 KV814708.1 Protein Homology CDS 53307 54224 . - 0 ID=cds-OFQ18289.1;Parent=gene-HMPREF2948_01285;Dbxref=NCBI_GP:OFQ18289.1;Name=OFQ18289.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012340658.1;locus_tag=HMPREF2948_01285;product=N-acetylglucosamine kinase;protein_id=OFQ18289.1;transl_table=11 KV814708.1 Genbank gene 54370 55095 . - . ID=gene-HMPREF2948_01290;Name=HMPREF2948_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01290 KV814708.1 Protein Homology CDS 54370 55095 . - 0 ID=cds-OFQ18290.1;Parent=gene-HMPREF2948_01290;Dbxref=NCBI_GP:OFQ18290.1;Name=OFQ18290.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996268.1;locus_tag=HMPREF2948_01290;product=phosphatidylglycerophosphatase;protein_id=OFQ18290.1;transl_table=11 KV814708.1 Genbank gene 55163 55810 . + . ID=gene-HMPREF2948_01295;Name=HMPREF2948_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01295 KV814708.1 Protein Homology CDS 55163 55810 . + 0 ID=cds-OFQ18291.1;Parent=gene-HMPREF2948_01295;Dbxref=NCBI_GP:OFQ18291.1;Name=OFQ18291.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629111.1;locus_tag=HMPREF2948_01295;product=GTP cyclohydrolase;protein_id=OFQ18291.1;transl_table=11 KV814708.1 Genbank gene 55859 56002 . - . ID=gene-HMPREF2948_01300;Name=HMPREF2948_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01300 KV814708.1 Protein Homology CDS 55859 56002 . - 0 ID=cds-OFQ18292.1;Parent=gene-HMPREF2948_01300;Dbxref=NCBI_GP:OFQ18292.1;Name=OFQ18292.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44125.1;locus_tag=HMPREF2948_01300;product=hypothetical protein;protein_id=OFQ18292.1;transl_table=11 KV814708.1 cmsearch binding_site 56128 56172 . + . ID=id-KV814708.1:56128..56172;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV814708.1 Genbank gene 56174 56851 . + . ID=gene-HMPREF2948_01305;Name=HMPREF2948_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01305 KV814708.1 Protein Homology CDS 56174 56851 . + 0 ID=cds-OFQ18293.1;Parent=gene-HMPREF2948_01305;Dbxref=NCBI_GP:OFQ18293.1;Name=OFQ18293.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696349.1;locus_tag=HMPREF2948_01305;product=7-cyano-7-deazaguanine synthase;protein_id=OFQ18293.1;transl_table=11 KV814708.1 Genbank gene 57048 58946 . + . ID=gene-HMPREF2948_01310;Name=HMPREF2948_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01310 KV814708.1 Protein Homology CDS 57048 58946 . + 0 ID=cds-OFQ18294.1;Parent=gene-HMPREF2948_01310;Dbxref=NCBI_GP:OFQ18294.1;Name=OFQ18294.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065563.1;locus_tag=HMPREF2948_01310;product=DNA topoisomerase IV subunit B;protein_id=OFQ18294.1;transl_table=11 KV814708.1 Genbank gene 58963 60156 . + . ID=gene-HMPREF2948_01315;Name=HMPREF2948_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01315 KV814708.1 Protein Homology CDS 58963 60156 . + 0 ID=cds-OFQ18295.1;Parent=gene-HMPREF2948_01315;Dbxref=NCBI_GP:OFQ18295.1;Name=OFQ18295.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065564.1;locus_tag=HMPREF2948_01315;product=nitrite reductase%2C copper-containing;protein_id=OFQ18295.1;transl_table=11 KV814708.1 Genbank gene 60168 62423 . + . ID=gene-HMPREF2948_01320;Name=HMPREF2948_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01320 KV814708.1 Protein Homology CDS 60168 62423 . + 0 ID=cds-OFQ18296.1;Parent=gene-HMPREF2948_01320;Dbxref=NCBI_GP:OFQ18296.1;Name=OFQ18296.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500580.1;locus_tag=HMPREF2948_01320;product=DNA topoisomerase IV subunit A;protein_id=OFQ18296.1;transl_table=11 KV814708.1 Genbank gene 62460 63674 . + . ID=gene-HMPREF2948_01325;Name=HMPREF2948_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01325 KV814708.1 Protein Homology CDS 62460 63674 . + 0 ID=cds-OFQ18297.1;Parent=gene-HMPREF2948_01325;Dbxref=NCBI_GP:OFQ18297.1;Name=OFQ18297.1;Note=is involved with the sodium-dependent uptake of glutamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696359.1;locus_tag=HMPREF2948_01325;product=sodium/glutamate symporter;protein_id=OFQ18297.1;transl_table=11 KV814708.1 Genbank gene 63728 67165 . - . ID=gene-HMPREF2948_01330;Name=HMPREF2948_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01330 KV814708.1 Protein Homology CDS 63728 67165 . - 0 ID=cds-OFQ18303.1;Parent=gene-HMPREF2948_01330;Dbxref=NCBI_GP:OFQ18303.1;Name=OFQ18303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694314.1;locus_tag=HMPREF2948_01330;product=transcription-repair coupling factor;protein_id=OFQ18303.1;transl_table=11 KV814708.1 Genbank gene 67454 69298 . - . ID=gene-HMPREF2948_01335;Name=HMPREF2948_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01335 KV814708.1 Protein Homology CDS 67454 69298 . - 0 ID=cds-OFQ18298.1;Parent=gene-HMPREF2948_01335;Dbxref=NCBI_GP:OFQ18298.1;Name=OFQ18298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696362.1;locus_tag=HMPREF2948_01335;product=tRNA(Met) cytidine acetyltransferase;protein_id=OFQ18298.1;transl_table=11 KV814708.1 Genbank gene 69302 71068 . - . ID=gene-HMPREF2948_01340;Name=HMPREF2948_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01340 KV814708.1 Protein Homology CDS 69302 71068 . - 0 ID=cds-OFQ18299.1;Parent=gene-HMPREF2948_01340;Dbxref=NCBI_GP:OFQ18299.1;Name=OFQ18299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697283.1;locus_tag=HMPREF2948_01340;product=hybrid sensor histidine kinase/response regulator;protein_id=OFQ18299.1;transl_table=11 ##sequence-region KV814709.1 1 8216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814709.1 Genbank region 1 8216 . + . ID=KV814709.1:1..8216;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814709.1 Genbank gene 358 765 . - . ID=gene-HMPREF2948_01345;Name=HMPREF2948_01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01345 KV814709.1 GeneMarkS+ CDS 358 765 . - 0 ID=cds-OFQ18127.1;Parent=gene-HMPREF2948_01345;Dbxref=NCBI_GP:OFQ18127.1;Name=OFQ18127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01345;product=hypothetical protein;protein_id=OFQ18127.1;transl_table=11 KV814709.1 Genbank gene 849 1985 . - . ID=gene-HMPREF2948_01350;Name=HMPREF2948_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01350 KV814709.1 Protein Homology CDS 849 1985 . - 0 ID=cds-OFQ18128.1;Parent=gene-HMPREF2948_01350;Dbxref=NCBI_GP:OFQ18128.1;Name=OFQ18128.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250155.1;locus_tag=HMPREF2948_01350;product=secretin;protein_id=OFQ18128.1;transl_table=11 KV814709.1 Genbank gene 1982 3028 . - . ID=gene-HMPREF2948_01355;Name=HMPREF2948_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01355 KV814709.1 Protein Homology CDS 1982 3028 . - 0 ID=cds-OFQ18129.1;Parent=gene-HMPREF2948_01355;Dbxref=NCBI_GP:OFQ18129.1;Name=OFQ18129.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697567.1;locus_tag=HMPREF2948_01355;product=hypothetical protein;protein_id=OFQ18129.1;transl_table=11 KV814709.1 Genbank gene 3039 3332 . - . ID=gene-HMPREF2948_01360;Name=HMPREF2948_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01360 KV814709.1 Protein Homology CDS 3039 3332 . - 0 ID=cds-OFQ18130.1;Parent=gene-HMPREF2948_01360;Dbxref=NCBI_GP:OFQ18130.1;Name=OFQ18130.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697572.1;locus_tag=HMPREF2948_01360;product=hypothetical protein;protein_id=OFQ18130.1;transl_table=11 KV814709.1 Genbank gene 3346 4782 . - . ID=gene-HMPREF2948_01365;Name=HMPREF2948_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01365 KV814709.1 GeneMarkS+ CDS 3346 4782 . - 0 ID=cds-OFQ18131.1;Parent=gene-HMPREF2948_01365;Dbxref=NCBI_GP:OFQ18131.1;Name=OFQ18131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01365;product=hypothetical protein;protein_id=OFQ18131.1;transl_table=11 KV814709.1 Genbank gene 4850 5080 . - . ID=gene-HMPREF2948_01370;Name=HMPREF2948_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01370 KV814709.1 GeneMarkS+ CDS 4850 5080 . - 0 ID=cds-OFQ18132.1;Parent=gene-HMPREF2948_01370;Dbxref=NCBI_GP:OFQ18132.1;Name=OFQ18132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01370;product=hypothetical protein;protein_id=OFQ18132.1;transl_table=11 KV814709.1 Genbank gene 5115 5372 . - . ID=gene-HMPREF2948_01375;Name=HMPREF2948_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01375 KV814709.1 Protein Homology CDS 5115 5372 . - 0 ID=cds-OFQ18133.1;Parent=gene-HMPREF2948_01375;Dbxref=NCBI_GP:OFQ18133.1;Name=OFQ18133.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697574.1;locus_tag=HMPREF2948_01375;product=hypothetical protein;protein_id=OFQ18133.1;transl_table=11 KV814709.1 Genbank gene 5458 5784 . - . ID=gene-HMPREF2948_01380;Name=HMPREF2948_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01380 KV814709.1 Protein Homology CDS 5458 5784 . - 0 ID=cds-OFQ18134.1;Parent=gene-HMPREF2948_01380;Dbxref=NCBI_GP:OFQ18134.1;Name=OFQ18134.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355520.1;locus_tag=HMPREF2948_01380;product=single-stranded DNA-binding protein;protein_id=OFQ18134.1;transl_table=11 KV814709.1 Genbank gene 5824 6972 . - . ID=gene-HMPREF2948_01385;Name=HMPREF2948_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01385 KV814709.1 Protein Homology CDS 5824 6972 . - 0 ID=cds-OFQ18135.1;Parent=gene-HMPREF2948_01385;Dbxref=NCBI_GP:OFQ18135.1;Name=OFQ18135.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962053.1;locus_tag=HMPREF2948_01385;product=hypothetical protein;protein_id=OFQ18135.1;transl_table=11 KV814709.1 Genbank gene 7162 7347 . + . ID=gene-HMPREF2948_01390;Name=HMPREF2948_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01390 KV814709.1 Protein Homology CDS 7162 7347 . + 0 ID=cds-OFQ18136.1;Parent=gene-HMPREF2948_01390;Dbxref=NCBI_GP:OFQ18136.1;Name=OFQ18136.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005821704.1;locus_tag=HMPREF2948_01390;product=hypothetical protein;protein_id=OFQ18136.1;transl_table=11 KV814709.1 Genbank gene 7431 7763 . + . ID=gene-HMPREF2948_01395;Name=HMPREF2948_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01395 KV814709.1 GeneMarkS+ CDS 7431 7763 . + 0 ID=cds-OFQ18137.1;Parent=gene-HMPREF2948_01395;Dbxref=NCBI_GP:OFQ18137.1;Name=OFQ18137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01395;product=hypothetical protein;protein_id=OFQ18137.1;transl_table=11 ##sequence-region KV814710.1 1 169230 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814710.1 Genbank region 1 169230 . + . ID=KV814710.1:1..169230;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814710.1 Genbank gene 75 866 . - . ID=gene-HMPREF2948_01400;Name=HMPREF2948_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01400 KV814710.1 Protein Homology CDS 75 866 . - 0 ID=cds-OFQ17616.1;Parent=gene-HMPREF2948_01400;Dbxref=NCBI_GP:OFQ17616.1;Name=OFQ17616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869285.1;locus_tag=HMPREF2948_01400;product=glutamate racemase;protein_id=OFQ17616.1;transl_table=11 KV814710.1 Genbank gene 897 2978 . - . ID=gene-HMPREF2948_01405;Name=HMPREF2948_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01405 KV814710.1 Protein Homology CDS 897 2978 . - 0 ID=cds-OFQ17617.1;Parent=gene-HMPREF2948_01405;Dbxref=NCBI_GP:OFQ17617.1;Name=OFQ17617.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43809.1;locus_tag=HMPREF2948_01405;product=ATP-dependent DNA helicase RecG;protein_id=OFQ17617.1;transl_table=11 KV814710.1 Genbank gene 2978 5098 . - . ID=gene-HMPREF2948_01410;Name=HMPREF2948_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01410 KV814710.1 Protein Homology CDS 2978 5098 . - 0 ID=cds-OFQ17618.1;Parent=gene-HMPREF2948_01410;Dbxref=NCBI_GP:OFQ17618.1;Name=OFQ17618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699949.1;locus_tag=HMPREF2948_01410;product=guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=OFQ17618.1;transl_table=11 KV814710.1 Genbank gene 5173 5439 . - . ID=gene-HMPREF2948_01415;Name=HMPREF2948_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01415 KV814710.1 Protein Homology CDS 5173 5439 . - 0 ID=cds-OFQ17619.1;Parent=gene-HMPREF2948_01415;Dbxref=NCBI_GP:OFQ17619.1;Name=OFQ17619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006717281.1;locus_tag=HMPREF2948_01415;product=DNA-directed RNA polymerase subunit omega;protein_id=OFQ17619.1;transl_table=11 KV814710.1 Genbank gene 5500 6126 . - . ID=gene-HMPREF2948_01420;Name=HMPREF2948_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01420 KV814710.1 Protein Homology CDS 5500 6126 . - 0 ID=cds-OFQ17620.1;Parent=gene-HMPREF2948_01420;Dbxref=NCBI_GP:OFQ17620.1;Name=OFQ17620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QJK3.1;locus_tag=HMPREF2948_01420;product=guanylate kinase;protein_id=OFQ17620.1;transl_table=11 KV814710.1 Genbank gene 6346 7365 . + . ID=gene-HMPREF2948_01425;Name=HMPREF2948_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01425 KV814710.1 Protein Homology CDS 6346 7365 . + 0 ID=cds-OFQ17621.1;Parent=gene-HMPREF2948_01425;Dbxref=NCBI_GP:OFQ17621.1;Name=OFQ17621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010129843.1;locus_tag=HMPREF2948_01425;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=OFQ17621.1;transl_table=11 KV814710.1 Genbank gene 7593 9410 . + . ID=gene-HMPREF2948_01430;Name=HMPREF2948_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01430 KV814710.1 Protein Homology CDS 7593 9410 . + 0 ID=cds-OFQ17622.1;Parent=gene-HMPREF2948_01430;Dbxref=NCBI_GP:OFQ17622.1;Name=OFQ17622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695619.1;locus_tag=HMPREF2948_01430;product=long-chain fatty acid--CoA ligase;protein_id=OFQ17622.1;transl_table=11 KV814710.1 Genbank gene 9458 10426 . - . ID=gene-HMPREF2948_01435;Name=HMPREF2948_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01435 KV814710.1 Protein Homology CDS 9458 10426 . - 0 ID=cds-OFQ17623.1;Parent=gene-HMPREF2948_01435;Dbxref=NCBI_GP:OFQ17623.1;Name=OFQ17623.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054871.1;locus_tag=HMPREF2948_01435;product=selenide%2C water dikinase;protein_id=OFQ17623.1;transl_table=11 KV814710.1 Genbank gene 10558 11826 . - . ID=gene-HMPREF2948_01440;Name=HMPREF2948_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01440 KV814710.1 Protein Homology CDS 10558 11826 . - 0 ID=cds-OFQ17624.1;Parent=gene-HMPREF2948_01440;Dbxref=NCBI_GP:OFQ17624.1;Name=OFQ17624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698413.1;locus_tag=HMPREF2948_01440;product=magnesium/cobalt efflux protein;protein_id=OFQ17624.1;transl_table=11 KV814710.1 Genbank gene 11905 12690 . - . ID=gene-HMPREF2948_01445;Name=HMPREF2948_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01445 KV814710.1 Protein Homology CDS 11905 12690 . - 0 ID=cds-OFQ17625.1;Parent=gene-HMPREF2948_01445;Dbxref=NCBI_GP:OFQ17625.1;Name=OFQ17625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538533.1;locus_tag=HMPREF2948_01445;product=ABC transporter permease;protein_id=OFQ17625.1;transl_table=11 KV814710.1 Genbank gene 12830 14221 . + . ID=gene-HMPREF2948_01450;Name=HMPREF2948_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01450 KV814710.1 Protein Homology CDS 12830 14221 . + 0 ID=cds-OFQ17626.1;Parent=gene-HMPREF2948_01450;Dbxref=NCBI_GP:OFQ17626.1;Name=OFQ17626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44518.1;locus_tag=HMPREF2948_01450;product=signal recognition particle protein;protein_id=OFQ17626.1;transl_table=11 KV814710.1 Genbank gene 14405 15400 . + . ID=gene-HMPREF2948_01455;Name=HMPREF2948_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01455 KV814710.1 Protein Homology CDS 14405 15400 . + 0 ID=cds-OFQ17627.1;Parent=gene-HMPREF2948_01455;Dbxref=NCBI_GP:OFQ17627.1;Name=OFQ17627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243038.1;locus_tag=HMPREF2948_01455;product=transcriptional regulator;protein_id=OFQ17627.1;transl_table=11 KV814710.1 Genbank gene 15448 15957 . - . ID=gene-HMPREF2948_01460;Name=idnK;gbkey=Gene;gene=idnK;gene_biotype=protein_coding;locus_tag=HMPREF2948_01460 KV814710.1 Protein Homology CDS 15448 15957 . - 0 ID=cds-OFQ17778.1;Parent=gene-HMPREF2948_01460;Dbxref=NCBI_GP:OFQ17778.1;Name=OFQ17778.1;gbkey=CDS;gene=idnK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578983.1;locus_tag=HMPREF2948_01460;product=gluconate kinase;protein_id=OFQ17778.1;transl_table=11 KV814710.1 Genbank gene 16206 17555 . + . ID=gene-HMPREF2948_01465;Name=HMPREF2948_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01465 KV814710.1 Protein Homology CDS 16206 17555 . + 0 ID=cds-OFQ17628.1;Parent=gene-HMPREF2948_01465;Dbxref=NCBI_GP:OFQ17628.1;Name=OFQ17628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005599098.1;locus_tag=HMPREF2948_01465;product=permease;protein_id=OFQ17628.1;transl_table=11 KV814710.1 Genbank gene 17888 20131 . + . ID=gene-HMPREF2948_01470;Name=HMPREF2948_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01470 KV814710.1 Protein Homology CDS 17888 20131 . + 0 ID=cds-OFQ17629.1;Parent=gene-HMPREF2948_01470;Dbxref=NCBI_GP:OFQ17629.1;Name=OFQ17629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695612.1;locus_tag=HMPREF2948_01470;product=nitric oxide reductase large subunit;protein_id=OFQ17629.1;transl_table=11 KV814710.1 Genbank gene 20314 20652 . + . ID=gene-HMPREF2948_01475;Name=HMPREF2948_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01475 KV814710.1 Protein Homology CDS 20314 20652 . + 0 ID=cds-OFQ17630.1;Parent=gene-HMPREF2948_01475;Dbxref=NCBI_GP:OFQ17630.1;Name=OFQ17630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524236.1;locus_tag=HMPREF2948_01475;product=hypothetical protein;protein_id=OFQ17630.1;transl_table=11 KV814710.1 Genbank gene 20774 21400 . + . ID=gene-HMPREF2948_01480;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=HMPREF2948_01480 KV814710.1 Protein Homology CDS 20774 21400 . + 0 ID=cds-OFQ17631.1;Parent=gene-HMPREF2948_01480;Dbxref=NCBI_GP:OFQ17631.1;Name=OFQ17631.1;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;inference=EXISTENCE: similar to AA sequence:SwissProt:Q87MH1.1;locus_tag=HMPREF2948_01480;product=uracil phosphoribosyltransferase;protein_id=OFQ17631.1;transl_table=11 KV814710.1 Genbank gene 21521 22768 . + . ID=gene-HMPREF2948_01485;Name=HMPREF2948_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01485 KV814710.1 Protein Homology CDS 21521 22768 . + 0 ID=cds-OFQ17632.1;Parent=gene-HMPREF2948_01485;Dbxref=NCBI_GP:OFQ17632.1;Name=OFQ17632.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687348.1;locus_tag=HMPREF2948_01485;product=uracil permease;protein_id=OFQ17632.1;transl_table=11 KV814710.1 Genbank gene 22840 23535 . + . ID=gene-HMPREF2948_01490;Name=HMPREF2948_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01490 KV814710.1 Protein Homology CDS 22840 23535 . + 0 ID=cds-OFQ17633.1;Parent=gene-HMPREF2948_01490;Dbxref=NCBI_GP:OFQ17633.1;Name=OFQ17633.1;Note=controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694288.1;locus_tag=HMPREF2948_01490;product=DnaA regulatory inactivator Hda;protein_id=OFQ17633.1;transl_table=11 KV814710.1 Genbank gene 23593 23889 . - . ID=gene-HMPREF2948_01495;Name=HMPREF2948_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01495 KV814710.1 Protein Homology CDS 23593 23889 . - 0 ID=cds-OFQ17634.1;Parent=gene-HMPREF2948_01495;Dbxref=NCBI_GP:OFQ17634.1;Name=OFQ17634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699964.1;locus_tag=HMPREF2948_01495;product=hypothetical protein;protein_id=OFQ17634.1;transl_table=11 KV814710.1 Genbank gene 23895 24488 . - . ID=gene-HMPREF2948_01500;Name=HMPREF2948_01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01500 KV814710.1 Protein Homology CDS 23895 24488 . - 0 ID=cds-OFQ17779.1;Parent=gene-HMPREF2948_01500;Dbxref=NCBI_GP:OFQ17779.1;Name=OFQ17779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695606.1;locus_tag=HMPREF2948_01500;product=hypothetical protein;protein_id=OFQ17779.1;transl_table=11 KV814710.1 Genbank gene 24508 24906 . - . ID=gene-HMPREF2948_01505;Name=HMPREF2948_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01505 KV814710.1 Protein Homology CDS 24508 24906 . - 0 ID=cds-OFQ17635.1;Parent=gene-HMPREF2948_01505;Dbxref=NCBI_GP:OFQ17635.1;Name=OFQ17635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695605.1;locus_tag=HMPREF2948_01505;product=hypothetical protein;protein_id=OFQ17635.1;transl_table=11 KV814710.1 Genbank gene 24906 25823 . - . ID=gene-HMPREF2948_01510;Name=HMPREF2948_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01510 KV814710.1 Protein Homology CDS 24906 25823 . - 0 ID=cds-OFQ17636.1;Parent=gene-HMPREF2948_01510;Dbxref=NCBI_GP:OFQ17636.1;Name=OFQ17636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550933.1;locus_tag=HMPREF2948_01510;product=c-type cytochrome biogenesis protein CcmI;protein_id=OFQ17636.1;transl_table=11 KV814710.1 Genbank gene 25823 26287 . - . ID=gene-HMPREF2948_01515;Name=HMPREF2948_01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01515 KV814710.1 Protein Homology CDS 25823 26287 . - 0 ID=cds-OFQ17637.1;Parent=gene-HMPREF2948_01515;Dbxref=NCBI_GP:OFQ17637.1;Name=OFQ17637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686388.1;locus_tag=HMPREF2948_01515;product=cytochrome C biogenesis protein;protein_id=OFQ17637.1;transl_table=11 KV814710.1 Genbank gene 26287 26832 . - . ID=gene-HMPREF2948_01520;Name=HMPREF2948_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01520 KV814710.1 Protein Homology CDS 26287 26832 . - 0 ID=cds-OFQ17638.1;Parent=gene-HMPREF2948_01520;Dbxref=NCBI_GP:OFQ17638.1;Name=OFQ17638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698393.1;locus_tag=HMPREF2948_01520;product=thiol:disulfide interchange protein;protein_id=OFQ17638.1;transl_table=11 KV814710.1 Genbank gene 26885 28834 . - . ID=gene-HMPREF2948_01525;Name=HMPREF2948_01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01525 KV814710.1 Protein Homology CDS 26885 28834 . - 0 ID=cds-OFQ17639.1;Parent=gene-HMPREF2948_01525;Dbxref=NCBI_GP:OFQ17639.1;Name=OFQ17639.1;Note=cytochrome c-type biogenesis protein%3B required for the transfer of heme to apocytochrome c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698411.1;locus_tag=HMPREF2948_01525;product=c-type cytochrome biogenesis protein CcmF;protein_id=OFQ17639.1;transl_table=11 KV814710.1 Genbank gene 28834 29364 . - . ID=gene-HMPREF2948_01530;Name=HMPREF2948_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01530 KV814710.1 Protein Homology CDS 28834 29364 . - 0 ID=cds-OFQ17640.1;Parent=gene-HMPREF2948_01530;Dbxref=NCBI_GP:OFQ17640.1;Name=OFQ17640.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547412.1;locus_tag=HMPREF2948_01530;product=cytochrome c biogenesis protein CcmE;protein_id=OFQ17640.1;transl_table=11 KV814710.1 Genbank gene 29361 29564 . - . ID=gene-HMPREF2948_01535;Name=HMPREF2948_01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01535 KV814710.1 Protein Homology CDS 29361 29564 . - 0 ID=cds-OFQ17641.1;Parent=gene-HMPREF2948_01535;Dbxref=NCBI_GP:OFQ17641.1;Name=OFQ17641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693416.1;locus_tag=HMPREF2948_01535;product=heme exporter protein CcmD;protein_id=OFQ17641.1;transl_table=11 KV814710.1 Genbank gene 29594 30334 . - . ID=gene-HMPREF2948_01540;Name=HMPREF2948_01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01540 KV814710.1 Protein Homology CDS 29594 30334 . - 0 ID=cds-OFQ17642.1;Parent=gene-HMPREF2948_01540;Dbxref=NCBI_GP:OFQ17642.1;Name=OFQ17642.1;Note=with CcmABDE is involved in the transport of protoheme IX%3B CcmC is required for heme transfer to CcmE;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005722243.1;locus_tag=HMPREF2948_01540;product=heme ABC transporter permease;protein_id=OFQ17642.1;transl_table=11 KV814710.1 Genbank gene 30403 31068 . - . ID=gene-HMPREF2948_01545;Name=HMPREF2948_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01545 KV814710.1 Protein Homology CDS 30403 31068 . - 0 ID=cds-OFQ17643.1;Parent=gene-HMPREF2948_01545;Dbxref=NCBI_GP:OFQ17643.1;Name=OFQ17643.1;Note=with CcmABCE is involved in the transport of protoheme IX%3B CcmB is required for the release of holoCcmE from CcmC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637214.1;locus_tag=HMPREF2948_01545;product=heme exporter protein CcmB;protein_id=OFQ17643.1;transl_table=11 KV814710.1 Genbank gene 31075 31716 . - . ID=gene-HMPREF2948_01550;Name=HMPREF2948_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01550 KV814710.1 Protein Homology CDS 31075 31716 . - 0 ID=cds-OFQ17644.1;Parent=gene-HMPREF2948_01550;Dbxref=NCBI_GP:OFQ17644.1;Name=OFQ17644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698436.1;locus_tag=HMPREF2948_01550;product=heme ABC exporter ATP-binding protein CcmA;protein_id=OFQ17644.1;transl_table=11 KV814710.1 Genbank gene 31999 32646 . + . ID=gene-HMPREF2948_01555;Name=HMPREF2948_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01555 KV814710.1 Protein Homology CDS 31999 32646 . + 0 ID=cds-OFQ17645.1;Parent=gene-HMPREF2948_01555;Dbxref=NCBI_GP:OFQ17645.1;Name=OFQ17645.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698366.1;locus_tag=HMPREF2948_01555;product=superoxide dismutase;protein_id=OFQ17645.1;transl_table=11 KV814710.1 Genbank gene 32701 33144 . - . ID=gene-HMPREF2948_01560;Name=HMPREF2948_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01560 KV814710.1 Protein Homology CDS 32701 33144 . - 0 ID=cds-OFQ17646.1;Parent=gene-HMPREF2948_01560;Dbxref=NCBI_GP:OFQ17646.1;Name=OFQ17646.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695593.1;locus_tag=HMPREF2948_01560;product=isoprenylcysteine carboxyl methyltransferase;protein_id=OFQ17646.1;transl_table=11 KV814710.1 Genbank gene 33196 33810 . - . ID=gene-HMPREF2948_01565;Name=HMPREF2948_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01565 KV814710.1 Protein Homology CDS 33196 33810 . - 0 ID=cds-OFQ17647.1;Parent=gene-HMPREF2948_01565;Dbxref=NCBI_GP:OFQ17647.1;Name=OFQ17647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43989.1;locus_tag=HMPREF2948_01565;product=hypothetical protein;protein_id=OFQ17647.1;transl_table=11 KV814710.1 Genbank gene 33829 35100 . - . ID=gene-HMPREF2948_01570;Name=HMPREF2948_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01570 KV814710.1 Protein Homology CDS 33829 35100 . - 0 ID=cds-OFQ17648.1;Parent=gene-HMPREF2948_01570;Dbxref=NCBI_GP:OFQ17648.1;Name=OFQ17648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43823.2;locus_tag=HMPREF2948_01570;product=histidine--tRNA ligase;protein_id=OFQ17648.1;transl_table=11 KV814710.1 Genbank gene 35110 36216 . - . ID=gene-HMPREF2948_01575;Name=HMPREF2948_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01575 KV814710.1 Protein Homology CDS 35110 36216 . - 0 ID=cds-OFQ17649.1;Parent=gene-HMPREF2948_01575;Dbxref=NCBI_GP:OFQ17649.1;Name=OFQ17649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693796.1;locus_tag=HMPREF2948_01575;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=OFQ17649.1;transl_table=11 KV814710.1 Genbank gene 36235 37218 . - . ID=gene-HMPREF2948_01580;Name=HMPREF2948_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01580 KV814710.1 Protein Homology CDS 36235 37218 . - 0 ID=cds-OFQ17650.1;Parent=gene-HMPREF2948_01580;Dbxref=NCBI_GP:OFQ17650.1;Name=OFQ17650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57065.1;locus_tag=HMPREF2948_01580;product=hypothetical protein;protein_id=OFQ17650.1;transl_table=11 KV814710.1 Genbank gene 37293 37835 . - . ID=gene-HMPREF2948_01585;Name=HMPREF2948_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01585 KV814710.1 Protein Homology CDS 37293 37835 . - 0 ID=cds-OFQ17651.1;Parent=gene-HMPREF2948_01585;Dbxref=NCBI_GP:OFQ17651.1;Name=OFQ17651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43988.1;locus_tag=HMPREF2948_01585;product=type IV pilus biogenesis/stability protein PilW;protein_id=OFQ17651.1;transl_table=11 KV814710.1 Genbank gene 37904 39052 . - . ID=gene-HMPREF2948_01590;Name=HMPREF2948_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01590 KV814710.1 Protein Homology CDS 37904 39052 . - 0 ID=cds-OFQ17652.1;Parent=gene-HMPREF2948_01590;Dbxref=NCBI_GP:OFQ17652.1;Name=OFQ17652.1;Note=23S rRNA m2A2503 methyltransferase%3B methylates the C2 position of the A2530 nucleotide in 23S rRNA%3B may be involved in antibiotic resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695586.1;locus_tag=HMPREF2948_01590;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=OFQ17652.1;transl_table=11 KV814710.1 Genbank gene 39355 40230 . + . ID=gene-HMPREF2948_01595;Name=HMPREF2948_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01595 KV814710.1 Protein Homology CDS 39355 40230 . + 0 ID=cds-OFQ17653.1;Parent=gene-HMPREF2948_01595;Dbxref=NCBI_GP:OFQ17653.1;Name=OFQ17653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538862.1;locus_tag=HMPREF2948_01595;product=D-alanyl-D-alanine endopeptidase;protein_id=OFQ17653.1;transl_table=11 KV814710.1 Genbank gene 40385 41266 . + . ID=gene-HMPREF2948_01600;Name=HMPREF2948_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01600 KV814710.1 Protein Homology CDS 40385 41266 . + 0 ID=cds-OFQ17654.1;Parent=gene-HMPREF2948_01600;Dbxref=NCBI_GP:OFQ17654.1;Name=OFQ17654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009116389.1;locus_tag=HMPREF2948_01600;product=iron-binding protein;protein_id=OFQ17654.1;transl_table=11 KV814710.1 Genbank gene 41266 42150 . + . ID=gene-HMPREF2948_01605;Name=HMPREF2948_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01605 KV814710.1 Protein Homology CDS 41266 42150 . + 0 ID=cds-OFQ17655.1;Parent=gene-HMPREF2948_01605;Dbxref=NCBI_GP:OFQ17655.1;Name=OFQ17655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064002.1;locus_tag=HMPREF2948_01605;product=iron ABC transporter permease;protein_id=OFQ17655.1;transl_table=11 KV814710.1 Genbank gene 42154 43005 . + . ID=gene-HMPREF2948_01610;Name=HMPREF2948_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01610 KV814710.1 Protein Homology CDS 42154 43005 . + 0 ID=cds-OFQ17656.1;Parent=gene-HMPREF2948_01610;Dbxref=NCBI_GP:OFQ17656.1;Name=OFQ17656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007527041.1;locus_tag=HMPREF2948_01610;product=hypothetical protein;protein_id=OFQ17656.1;transl_table=11 KV814710.1 Genbank gene 42998 43831 . + . ID=gene-HMPREF2948_01615;Name=HMPREF2948_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01615 KV814710.1 Protein Homology CDS 42998 43831 . + 0 ID=cds-OFQ17657.1;Parent=gene-HMPREF2948_01615;Dbxref=NCBI_GP:OFQ17657.1;Name=OFQ17657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064004.1;locus_tag=HMPREF2948_01615;product=iron ABC transporter permease;protein_id=OFQ17657.1;transl_table=11 KV814710.1 Genbank gene 43866 45038 . - . ID=gene-HMPREF2948_01620;Name=rumB;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=HMPREF2948_01620 KV814710.1 Protein Homology CDS 43866 45038 . - 0 ID=cds-OFQ17658.1;Parent=gene-HMPREF2948_01620;Dbxref=NCBI_GP:OFQ17658.1;Name=OFQ17658.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695578.1;locus_tag=HMPREF2948_01620;product=23S rRNA (uracil(747)-C(5))-methyltransferase;protein_id=OFQ17658.1;transl_table=11 KV814710.1 Genbank gene 45035 46078 . - . ID=gene-HMPREF2948_01625;Name=HMPREF2948_01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01625 KV814710.1 Protein Homology CDS 45035 46078 . - 0 ID=cds-OFQ17659.1;Parent=gene-HMPREF2948_01625;Dbxref=NCBI_GP:OFQ17659.1;Name=OFQ17659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547209.1;locus_tag=HMPREF2948_01625;product=beta-N-acetylhexosaminidase;protein_id=OFQ17659.1;transl_table=11 KV814710.1 Genbank gene 46082 46429 . - . ID=gene-HMPREF2948_01630;Name=HMPREF2948_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01630 KV814710.1 Protein Homology CDS 46082 46429 . - 0 ID=cds-OFQ17660.1;Parent=gene-HMPREF2948_01630;Dbxref=NCBI_GP:OFQ17660.1;Name=OFQ17660.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627387.1;locus_tag=HMPREF2948_01630;product=hypothetical protein;protein_id=OFQ17660.1;transl_table=11 KV814710.1 Genbank gene 46429 46779 . - . ID=gene-HMPREF2948_01635;Name=HMPREF2948_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01635 KV814710.1 Protein Homology CDS 46429 46779 . - 0 ID=cds-OFQ17661.1;Parent=gene-HMPREF2948_01635;Dbxref=NCBI_GP:OFQ17661.1;Name=OFQ17661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627389.1;locus_tag=HMPREF2948_01635;product=histidine triad nucleotide-binding protein;protein_id=OFQ17661.1;transl_table=11 KV814710.1 Genbank gene 46880 48754 . - . ID=gene-HMPREF2948_01640;Name=HMPREF2948_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01640 KV814710.1 Protein Homology CDS 46880 48754 . - 0 ID=cds-OFQ17662.1;Parent=gene-HMPREF2948_01640;Dbxref=NCBI_GP:OFQ17662.1;Name=OFQ17662.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064011.1;locus_tag=HMPREF2948_01640;product=peptidylprolyl isomerase;protein_id=OFQ17662.1;transl_table=11 KV814710.1 Genbank pseudogene 48823 49379 . - . ID=gene-HMPREF2948_01645;Name=HMPREF2948_01645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_01645;pseudo=true KV814710.1 Protein Homology CDS 48823 49379 . - 0 ID=cds-HMPREF2948_01645;Parent=gene-HMPREF2948_01645;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636917.1;locus_tag=HMPREF2948_01645;product=hypothetical protein;pseudo=true;transl_table=11 KV814710.1 Genbank gene 49390 50748 . - . ID=gene-HMPREF2948_01650;Name=trmE;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;locus_tag=HMPREF2948_01650 KV814710.1 Protein Homology CDS 49390 50748 . - 0 ID=cds-OFQ17663.1;Parent=gene-HMPREF2948_01650;Dbxref=NCBI_GP:OFQ17663.1;Name=OFQ17663.1;Note=in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE;gbkey=CDS;gene=trmE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527255.1;locus_tag=HMPREF2948_01650;product=tRNA modification GTPase;protein_id=OFQ17663.1;transl_table=11 KV814710.1 Genbank gene 50876 52504 . - . ID=gene-HMPREF2948_01655;Name=HMPREF2948_01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01655 KV814710.1 Protein Homology CDS 50876 52504 . - 0 ID=cds-OFQ17664.1;Parent=gene-HMPREF2948_01655;Dbxref=NCBI_GP:OFQ17664.1;Name=OFQ17664.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005717540.1;locus_tag=HMPREF2948_01655;product=membrane protein insertase YidC;protein_id=OFQ17664.1;transl_table=11 KV814710.1 Genbank gene 52504 52767 . - . ID=gene-HMPREF2948_01660;Name=HMPREF2948_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01660 KV814710.1 Protein Homology CDS 52504 52767 . - 0 ID=cds-OFQ17665.1;Parent=gene-HMPREF2948_01660;Dbxref=NCBI_GP:OFQ17665.1;Name=OFQ17665.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44972.1;locus_tag=HMPREF2948_01660;product=membrane protein insertion efficiency factor YidD;protein_id=OFQ17665.1;transl_table=11 KV814710.1 Genbank gene 52722 53090 . - . ID=gene-HMPREF2948_01665;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=HMPREF2948_01665 KV814710.1 Protein Homology CDS 52722 53090 . - 0 ID=cds-OFQ17666.1;Parent=gene-HMPREF2948_01665;Dbxref=NCBI_GP:OFQ17666.1;Name=OFQ17666.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064016.1;locus_tag=HMPREF2948_01665;product=ribonuclease P protein component;protein_id=OFQ17666.1;transl_table=11 KV814710.1 Genbank gene 53103 53237 . - . ID=gene-HMPREF2948_01670;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=HMPREF2948_01670 KV814710.1 Protein Homology CDS 53103 53237 . - 0 ID=cds-OFQ17667.1;Parent=gene-HMPREF2948_01670;Dbxref=NCBI_GP:OFQ17667.1;Name=OFQ17667.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q1QS96.1;locus_tag=HMPREF2948_01670;product=50S ribosomal protein L34;protein_id=OFQ17667.1;transl_table=11 KV814710.1 Genbank gene 53557 54924 . + . ID=gene-HMPREF2948_01675;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=HMPREF2948_01675 KV814710.1 Protein Homology CDS 53557 54924 . + 0 ID=cds-OFQ17668.1;Parent=gene-HMPREF2948_01675;Dbxref=NCBI_GP:OFQ17668.1;Name=OFQ17668.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693336.1;locus_tag=HMPREF2948_01675;product=chromosomal replication initiation protein DnaA;protein_id=OFQ17668.1;transl_table=11 KV814710.1 Genbank gene 54935 56035 . + . ID=gene-HMPREF2948_01680;Name=HMPREF2948_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01680 KV814710.1 Protein Homology CDS 54935 56035 . + 0 ID=cds-OFQ17669.1;Parent=gene-HMPREF2948_01680;Dbxref=NCBI_GP:OFQ17669.1;Name=OFQ17669.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651439.1;locus_tag=HMPREF2948_01680;product=DNA polymerase III subunit beta;protein_id=OFQ17669.1;transl_table=11 KV814710.1 Genbank gene 56041 57123 . + . ID=gene-HMPREF2948_01685;Name=HMPREF2948_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01685 KV814710.1 Protein Homology CDS 56041 57123 . + 0 ID=cds-OFQ17670.1;Parent=gene-HMPREF2948_01685;Dbxref=NCBI_GP:OFQ17670.1;Name=OFQ17670.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698394.1;locus_tag=HMPREF2948_01685;product=DNA replication/repair protein RecF;protein_id=OFQ17670.1;transl_table=11 KV814710.1 Genbank gene 57187 58332 . - . ID=gene-HMPREF2948_01690;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=HMPREF2948_01690 KV814710.1 Protein Homology CDS 57187 58332 . - 0 ID=cds-OFQ17671.1;Parent=gene-HMPREF2948_01690;Dbxref=NCBI_GP:OFQ17671.1;Name=OFQ17671.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005703355.1;locus_tag=HMPREF2948_01690;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=OFQ17671.1;transl_table=11 KV814710.1 Genbank gene 58369 59172 . - . ID=gene-HMPREF2948_01695;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=HMPREF2948_01695 KV814710.1 Protein Homology CDS 58369 59172 . - 0 ID=cds-OFQ17672.1;Parent=gene-HMPREF2948_01695;Dbxref=NCBI_GP:OFQ17672.1;Name=OFQ17672.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N353.1;locus_tag=HMPREF2948_01695;product=glucosamine-6-phosphate deaminase;protein_id=OFQ17672.1;transl_table=11 KV814710.1 Genbank gene 59265 60143 . - . ID=gene-HMPREF2948_01700;Name=HMPREF2948_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01700 KV814710.1 Protein Homology CDS 59265 60143 . - 0 ID=cds-OFQ17673.1;Parent=gene-HMPREF2948_01700;Dbxref=NCBI_GP:OFQ17673.1;Name=OFQ17673.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547128.1;locus_tag=HMPREF2948_01700;product=N-acetylneuraminate lyase;protein_id=OFQ17673.1;transl_table=11 KV814710.1 Genbank gene 60153 61019 . - . ID=gene-HMPREF2948_01705;Name=HMPREF2948_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01705 KV814710.1 Protein Homology CDS 60153 61019 . - 0 ID=cds-OFQ17674.1;Parent=gene-HMPREF2948_01705;Dbxref=NCBI_GP:OFQ17674.1;Name=OFQ17674.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005574672.1;locus_tag=HMPREF2948_01705;product=N-acetylmannosamine kinase;protein_id=OFQ17674.1;transl_table=11 KV814710.1 Genbank gene 61063 61938 . - . ID=gene-HMPREF2948_01710;Name=HMPREF2948_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01710 KV814710.1 Protein Homology CDS 61063 61938 . - 0 ID=cds-OFQ17675.1;Parent=gene-HMPREF2948_01710;Dbxref=NCBI_GP:OFQ17675.1;Name=OFQ17675.1;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695558.1;locus_tag=HMPREF2948_01710;product=N-acetylmannosamine kinase;protein_id=OFQ17675.1;transl_table=11 KV814710.1 Genbank gene 61950 62639 . - . ID=gene-HMPREF2948_01715;Name=HMPREF2948_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01715 KV814710.1 Protein Homology CDS 61950 62639 . - 0 ID=cds-OFQ17676.1;Parent=gene-HMPREF2948_01715;Dbxref=NCBI_GP:OFQ17676.1;Name=OFQ17676.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005709906.1;locus_tag=HMPREF2948_01715;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=OFQ17676.1;transl_table=11 KV814710.1 Genbank gene 62858 64324 . + . ID=gene-HMPREF2948_01720;Name=HMPREF2948_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01720 KV814710.1 Protein Homology CDS 62858 64324 . + 0 ID=cds-OFQ17677.1;Parent=gene-HMPREF2948_01720;Dbxref=NCBI_GP:OFQ17677.1;Name=OFQ17677.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167869.1;locus_tag=HMPREF2948_01720;product=PTS glucose transporter subunit IIBC;protein_id=OFQ17677.1;transl_table=11 KV814710.1 Genbank gene 64833 65501 . - . ID=gene-HMPREF2948_01725;Name=HMPREF2948_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01725 KV814710.1 Protein Homology CDS 64833 65501 . - 0 ID=cds-OFQ17678.1;Parent=gene-HMPREF2948_01725;Dbxref=NCBI_GP:OFQ17678.1;Name=OFQ17678.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647998.1;locus_tag=HMPREF2948_01725;product=transcriptional regulator Crp;protein_id=OFQ17678.1;transl_table=11 KV814710.1 Genbank gene 65518 65736 . - . ID=gene-HMPREF2948_01730;Name=HMPREF2948_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01730 KV814710.1 Protein Homology CDS 65518 65736 . - 0 ID=cds-OFQ17780.1;Parent=gene-HMPREF2948_01730;Dbxref=NCBI_GP:OFQ17780.1;Name=OFQ17780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CLQ8.1;locus_tag=HMPREF2948_01730;product=hypothetical protein;protein_id=OFQ17780.1;transl_table=11 KV814710.1 Genbank gene 65758 66411 . - . ID=gene-HMPREF2948_01735;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=HMPREF2948_01735 KV814710.1 Protein Homology CDS 65758 66411 . - 0 ID=cds-OFQ17679.1;Parent=gene-HMPREF2948_01735;Dbxref=NCBI_GP:OFQ17679.1;Name=OFQ17679.1;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698358.1;locus_tag=HMPREF2948_01735;product=nucleoid occlusion factor SlmA;protein_id=OFQ17679.1;transl_table=11 KV814710.1 Genbank gene 66415 66870 . - . ID=gene-HMPREF2948_01740;Name=HMPREF2948_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01740 KV814710.1 Protein Homology CDS 66415 66870 . - 0 ID=cds-OFQ17680.1;Parent=gene-HMPREF2948_01740;Dbxref=NCBI_GP:OFQ17680.1;Name=OFQ17680.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631431.1;locus_tag=HMPREF2948_01740;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=OFQ17680.1;transl_table=11 KV814710.1 Genbank gene 66944 68146 . - . ID=gene-HMPREF2948_01745;Name=HMPREF2948_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01745 KV814710.1 Protein Homology CDS 66944 68146 . - 0 ID=cds-OFQ17681.1;Parent=gene-HMPREF2948_01745;Dbxref=NCBI_GP:OFQ17681.1;Name=OFQ17681.1;Note=catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693302.1;locus_tag=HMPREF2948_01745;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=OFQ17681.1;transl_table=11 KV814710.1 Genbank gene 68347 69012 . + . ID=gene-HMPREF2948_01750;Name=HMPREF2948_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01750 KV814710.1 Protein Homology CDS 68347 69012 . + 0 ID=cds-OFQ17682.1;Parent=gene-HMPREF2948_01750;Dbxref=NCBI_GP:OFQ17682.1;Name=OFQ17682.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLV5.2;locus_tag=HMPREF2948_01750;product=hypothetical protein;protein_id=OFQ17682.1;transl_table=11 KV814710.1 Genbank gene 69232 69468 . + . ID=gene-HMPREF2948_01755;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=HMPREF2948_01755 KV814710.1 Protein Homology CDS 69232 69468 . + 0 ID=cds-OFQ17683.1;Parent=gene-HMPREF2948_01755;Dbxref=NCBI_GP:OFQ17683.1;Name=OFQ17683.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005542826.1;locus_tag=HMPREF2948_01755;product=50S ribosomal protein L28;protein_id=OFQ17683.1;transl_table=11 KV814710.1 Genbank gene 69480 69650 . + . ID=gene-HMPREF2948_01760;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=HMPREF2948_01760 KV814710.1 Protein Homology CDS 69480 69650 . + 0 ID=cds-OFQ17684.1;Parent=gene-HMPREF2948_01760;Dbxref=NCBI_GP:OFQ17684.1;Name=OFQ17684.1;Note=in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif;gbkey=CDS;gene=rpmG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005613503.1;locus_tag=HMPREF2948_01760;product=50S ribosomal protein L33;protein_id=OFQ17684.1;transl_table=11 KV814710.1 Genbank gene 69723 70538 . + . ID=gene-HMPREF2948_01765;Name=HMPREF2948_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01765 KV814710.1 Protein Homology CDS 69723 70538 . + 0 ID=cds-OFQ17685.1;Parent=gene-HMPREF2948_01765;Dbxref=NCBI_GP:OFQ17685.1;Name=OFQ17685.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064030.1;locus_tag=HMPREF2948_01765;product=DNA-formamidopyrimidine glycosylase;protein_id=OFQ17685.1;transl_table=11 KV814710.1 Genbank gene 70560 71279 . - . ID=gene-HMPREF2948_01770;Name=HMPREF2948_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01770 KV814710.1 Protein Homology CDS 70560 71279 . - 0 ID=cds-OFQ17686.1;Parent=gene-HMPREF2948_01770;Dbxref=NCBI_GP:OFQ17686.1;Name=OFQ17686.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698371.1;locus_tag=HMPREF2948_01770;product=hypothetical protein;protein_id=OFQ17686.1;transl_table=11 KV814710.1 Genbank gene 71572 73104 . + . ID=gene-HMPREF2948_01775;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=HMPREF2948_01775 KV814710.1 Protein Homology CDS 71572 73104 . + 0 ID=cds-OFQ17687.1;Parent=gene-HMPREF2948_01775;Dbxref=NCBI_GP:OFQ17687.1;Name=OFQ17687.1;Note=catalyzes the formate-dependent reduction of nitrite to ammonia%3B cytochrome C552;gbkey=CDS;gene=nrfA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167411.1;locus_tag=HMPREF2948_01775;product=cytochrome c nitrite reductase;protein_id=OFQ17687.1;transl_table=11 KV814710.1 Genbank gene 73177 73842 . + . ID=gene-HMPREF2948_01780;Name=HMPREF2948_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01780 KV814710.1 Protein Homology CDS 73177 73842 . + 0 ID=cds-OFQ17688.1;Parent=gene-HMPREF2948_01780;Dbxref=NCBI_GP:OFQ17688.1;Name=OFQ17688.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550941.1;locus_tag=HMPREF2948_01780;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=OFQ17688.1;transl_table=11 KV814710.1 Genbank gene 73842 74519 . + . ID=gene-HMPREF2948_01785;Name=HMPREF2948_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01785 KV814710.1 Protein Homology CDS 73842 74519 . + 0 ID=cds-OFQ17689.1;Parent=gene-HMPREF2948_01785;Dbxref=NCBI_GP:OFQ17689.1;Name=OFQ17689.1;Note=4Fe4S subunit%3B may be involved in the transfer of electrons from quinones to the c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241727.1;locus_tag=HMPREF2948_01785;product=cytochrome c nitrite reductase Fe-S protein;protein_id=OFQ17689.1;transl_table=11 KV814710.1 Genbank gene 74516 75481 . + . ID=gene-HMPREF2948_01790;Name=HMPREF2948_01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01790 KV814710.1 Protein Homology CDS 74516 75481 . + 0 ID=cds-OFQ17690.1;Parent=gene-HMPREF2948_01790;Dbxref=NCBI_GP:OFQ17690.1;Name=OFQ17690.1;Note=membrane protein%2C may be involved in the transfer of electrons from quinones to c-type cytochromes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693393.1;locus_tag=HMPREF2948_01790;product=cytochrome c nitrite reductase subunit NrfD;protein_id=OFQ17690.1;transl_table=11 KV814710.1 Genbank gene 75629 77533 . + . ID=gene-HMPREF2948_01795;Name=HMPREF2948_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01795 KV814710.1 Protein Homology CDS 75629 77533 . + 0 ID=cds-OFQ17691.1;Parent=gene-HMPREF2948_01795;Dbxref=NCBI_GP:OFQ17691.1;Name=OFQ17691.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44944.1;locus_tag=HMPREF2948_01795;product=cytochrome C biogenesis protein CcmF;protein_id=OFQ17691.1;transl_table=11 KV814710.1 Genbank gene 77526 78056 . + . ID=gene-HMPREF2948_01800;Name=HMPREF2948_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01800 KV814710.1 Protein Homology CDS 77526 78056 . + 0 ID=cds-OFQ17692.1;Parent=gene-HMPREF2948_01800;Dbxref=NCBI_GP:OFQ17692.1;Name=OFQ17692.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695540.1;locus_tag=HMPREF2948_01800;product=thiol:disulfide interchange protein;protein_id=OFQ17692.1;transl_table=11 KV814710.1 Genbank gene 78058 79113 . + . ID=gene-HMPREF2948_01805;Name=HMPREF2948_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01805 KV814710.1 Protein Homology CDS 78058 79113 . + 0 ID=cds-OFQ17693.1;Parent=gene-HMPREF2948_01805;Dbxref=NCBI_GP:OFQ17693.1;Name=OFQ17693.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695539.1;locus_tag=HMPREF2948_01805;product=nitrite reductase;protein_id=OFQ17693.1;transl_table=11 KV814710.1 Genbank gene 79117 80319 . + . ID=gene-HMPREF2948_01810;Name=HMPREF2948_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01810 KV814710.1 Protein Homology CDS 79117 80319 . + 0 ID=cds-OFQ17694.1;Parent=gene-HMPREF2948_01810;Dbxref=NCBI_GP:OFQ17694.1;Name=OFQ17694.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064040.1;locus_tag=HMPREF2948_01810;product=hypothetical protein;protein_id=OFQ17694.1;transl_table=11 KV814710.1 Genbank gene 80429 81523 . + . ID=gene-HMPREF2948_01815;Name=HMPREF2948_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01815 KV814710.1 Protein Homology CDS 80429 81523 . + 0 ID=cds-OFQ17695.1;Parent=gene-HMPREF2948_01815;Dbxref=NCBI_GP:OFQ17695.1;Name=OFQ17695.1;Note=catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005607068.1;locus_tag=HMPREF2948_01815;product=5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase;protein_id=OFQ17695.1;transl_table=11 KV814710.1 Genbank gene 81664 82980 . - . ID=gene-HMPREF2948_01820;Name=HMPREF2948_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01820 KV814710.1 Protein Homology CDS 81664 82980 . - 0 ID=cds-OFQ17696.1;Parent=gene-HMPREF2948_01820;Dbxref=NCBI_GP:OFQ17696.1;Name=OFQ17696.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44610.1;locus_tag=HMPREF2948_01820;product=transporter;protein_id=OFQ17696.1;transl_table=11 KV814710.1 Genbank gene 83034 83777 . - . ID=gene-HMPREF2948_01825;Name=HMPREF2948_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01825 KV814710.1 Protein Homology CDS 83034 83777 . - 0 ID=cds-OFQ17697.1;Parent=gene-HMPREF2948_01825;Dbxref=NCBI_GP:OFQ17697.1;Name=OFQ17697.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666715.1;locus_tag=HMPREF2948_01825;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=OFQ17697.1;transl_table=11 KV814710.1 Genbank gene 83825 85531 . - . ID=gene-HMPREF2948_01830;Name=HMPREF2948_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01830 KV814710.1 Protein Homology CDS 83825 85531 . - 0 ID=cds-OFQ17698.1;Parent=gene-HMPREF2948_01830;Dbxref=NCBI_GP:OFQ17698.1;Name=OFQ17698.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CPI4.1;locus_tag=HMPREF2948_01830;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=OFQ17698.1;transl_table=11 KV814710.1 Genbank gene 85537 86817 . - . ID=gene-HMPREF2948_01835;Name=HMPREF2948_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01835 KV814710.1 Protein Homology CDS 85537 86817 . - 0 ID=cds-OFQ17699.1;Parent=gene-HMPREF2948_01835;Dbxref=NCBI_GP:OFQ17699.1;Name=OFQ17699.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064044.1;locus_tag=HMPREF2948_01835;product=isochorismate synthase;protein_id=OFQ17699.1;transl_table=11 KV814710.1 Genbank gene 86972 88186 . + . ID=gene-HMPREF2948_01840;Name=HMPREF2948_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01840 KV814710.1 Protein Homology CDS 86972 88186 . + 0 ID=cds-OFQ17700.1;Parent=gene-HMPREF2948_01840;Dbxref=NCBI_GP:OFQ17700.1;Name=OFQ17700.1;Note=broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771994.1;locus_tag=HMPREF2948_01840;product=aminotransferase;protein_id=OFQ17700.1;transl_table=11 KV814710.1 Genbank gene 88235 88531 . - . ID=gene-HMPREF2948_01845;Name=HMPREF2948_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01845 KV814710.1 GeneMarkS+ CDS 88235 88531 . - 0 ID=cds-OFQ17701.1;Parent=gene-HMPREF2948_01845;Dbxref=NCBI_GP:OFQ17701.1;Name=OFQ17701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_01845;product=hypothetical protein;protein_id=OFQ17701.1;transl_table=11 KV814710.1 Genbank pseudogene 88564 89027 . - . ID=gene-HMPREF2948_01850;Name=HMPREF2948_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_01850;pseudo=true KV814710.1 Protein Homology CDS 88564 89027 . - 0 ID=cds-HMPREF2948_01850;Parent=gene-HMPREF2948_01850;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005755683.1;locus_tag=HMPREF2948_01850;product=CDP-alcohol phosphatidyltransferase;pseudo=true;transl_table=11 KV814710.1 Genbank gene 89106 90020 . - . ID=gene-HMPREF2948_01855;Name=HMPREF2948_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01855 KV814710.1 Protein Homology CDS 89106 90020 . - 0 ID=cds-OFQ17702.1;Parent=gene-HMPREF2948_01855;Dbxref=NCBI_GP:OFQ17702.1;Name=OFQ17702.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657841.1;locus_tag=HMPREF2948_01855;product=GTPase Era;protein_id=OFQ17702.1;transl_table=11 KV814710.1 Genbank gene 90017 90700 . - . ID=gene-HMPREF2948_01860;Name=HMPREF2948_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01860 KV814710.1 Protein Homology CDS 90017 90700 . - 0 ID=cds-OFQ17703.1;Parent=gene-HMPREF2948_01860;Dbxref=NCBI_GP:OFQ17703.1;Name=OFQ17703.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693887.1;locus_tag=HMPREF2948_01860;product=ribonuclease III;protein_id=OFQ17703.1;transl_table=11 KV814710.1 Genbank gene 90702 91751 . - . ID=gene-HMPREF2948_01865;Name=HMPREF2948_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01865 KV814710.1 Protein Homology CDS 90702 91751 . - 0 ID=cds-OFQ17704.1;Parent=gene-HMPREF2948_01865;Dbxref=NCBI_GP:OFQ17704.1;Name=OFQ17704.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697919.1;locus_tag=HMPREF2948_01865;product=S26 family signal peptidase;protein_id=OFQ17704.1;transl_table=11 KV814710.1 Genbank gene 91764 93560 . - . ID=gene-HMPREF2948_01870;Name=HMPREF2948_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01870 KV814710.1 Protein Homology CDS 91764 93560 . - 0 ID=cds-OFQ17781.1;Parent=gene-HMPREF2948_01870;Dbxref=NCBI_GP:OFQ17781.1;Name=OFQ17781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649880.1;locus_tag=HMPREF2948_01870;product=elongation factor 4;protein_id=OFQ17781.1;transl_table=11 KV814710.1 Genbank gene 93729 94112 . - . ID=gene-HMPREF2948_01875;Name=HMPREF2948_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01875 KV814710.1 Protein Homology CDS 93729 94112 . - 0 ID=cds-OFQ17705.1;Parent=gene-HMPREF2948_01875;Dbxref=NCBI_GP:OFQ17705.1;Name=OFQ17705.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=HMPREF2948_01875;product=autonomous glycyl radical cofactor GrcA;protein_id=OFQ17705.1;transl_table=11 KV814710.1 Genbank gene 94378 95037 . + . ID=gene-HMPREF2948_01880;Name=HMPREF2948_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01880 KV814710.1 Protein Homology CDS 94378 95037 . + 0 ID=cds-OFQ17706.1;Parent=gene-HMPREF2948_01880;Dbxref=NCBI_GP:OFQ17706.1;Name=OFQ17706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995730.1;locus_tag=HMPREF2948_01880;product=uracil-DNA glycosylase;protein_id=OFQ17706.1;transl_table=11 KV814710.1 Genbank gene 95034 95525 . - . ID=gene-HMPREF2948_01885;Name=HMPREF2948_01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01885 KV814710.1 Protein Homology CDS 95034 95525 . - 0 ID=cds-OFQ17707.1;Parent=gene-HMPREF2948_01885;Dbxref=NCBI_GP:OFQ17707.1;Name=OFQ17707.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006533484.1;locus_tag=HMPREF2948_01885;product=tRNA-specific adenosine deaminase;protein_id=OFQ17707.1;transl_table=11 KV814710.1 Genbank gene 95562 96413 . - . ID=gene-HMPREF2948_01890;Name=HMPREF2948_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01890 KV814710.1 Protein Homology CDS 95562 96413 . - 0 ID=cds-OFQ17708.1;Parent=gene-HMPREF2948_01890;Dbxref=NCBI_GP:OFQ17708.1;Name=OFQ17708.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758568.1;locus_tag=HMPREF2948_01890;product=thymidylate synthase;protein_id=OFQ17708.1;transl_table=11 KV814710.1 Genbank gene 96424 97233 . - . ID=gene-HMPREF2948_01895;Name=HMPREF2948_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01895 KV814710.1 Protein Homology CDS 96424 97233 . - 0 ID=cds-OFQ17709.1;Parent=gene-HMPREF2948_01895;Dbxref=NCBI_GP:OFQ17709.1;Name=OFQ17709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005577208.1;locus_tag=HMPREF2948_01895;product=prolipoprotein diacylglyceryl transferase;protein_id=OFQ17709.1;transl_table=11 KV814710.1 Genbank gene 97242 98036 . - . ID=gene-HMPREF2948_01900;Name=HMPREF2948_01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01900 KV814710.1 Protein Homology CDS 97242 98036 . - 0 ID=cds-OFQ17710.1;Parent=gene-HMPREF2948_01900;Dbxref=NCBI_GP:OFQ17710.1;Name=OFQ17710.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013746519.1;locus_tag=HMPREF2948_01900;product=hypothetical protein;protein_id=OFQ17710.1;transl_table=11 KV814710.1 Genbank gene 98036 98629 . - . ID=gene-HMPREF2948_01905;Name=HMPREF2948_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01905 KV814710.1 Protein Homology CDS 98036 98629 . - 0 ID=cds-OFQ17711.1;Parent=gene-HMPREF2948_01905;Dbxref=NCBI_GP:OFQ17711.1;Name=OFQ17711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57045.2;locus_tag=HMPREF2948_01905;product=RNA pyrophosphohydrolase;protein_id=OFQ17711.1;transl_table=11 KV814710.1 Genbank gene 99114 99677 . - . ID=gene-HMPREF2948_01910;Name=HMPREF2948_01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01910 KV814710.1 Protein Homology CDS 99114 99677 . - 0 ID=cds-OFQ17712.1;Parent=gene-HMPREF2948_01910;Dbxref=NCBI_GP:OFQ17712.1;Name=OFQ17712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695512.1;locus_tag=HMPREF2948_01910;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=OFQ17712.1;transl_table=11 KV814710.1 Genbank gene 99819 100262 . + . ID=gene-HMPREF2948_01915;Name=HMPREF2948_01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01915 KV814710.1 Protein Homology CDS 99819 100262 . + 0 ID=cds-OFQ17713.1;Parent=gene-HMPREF2948_01915;Dbxref=NCBI_GP:OFQ17713.1;Name=OFQ17713.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054948.1;locus_tag=HMPREF2948_01915;product=prepilin peptidase;protein_id=OFQ17713.1;transl_table=11 KV814710.1 Genbank gene 100269 101648 . + . ID=gene-HMPREF2948_01920;Name=HMPREF2948_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01920 KV814710.1 Protein Homology CDS 100269 101648 . + 0 ID=cds-OFQ17714.1;Parent=gene-HMPREF2948_01920;Dbxref=NCBI_GP:OFQ17714.1;Name=OFQ17714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064061.1;locus_tag=HMPREF2948_01920;product=protein transporter HofB;protein_id=OFQ17714.1;transl_table=11 KV814710.1 Genbank gene 101657 102880 . + . ID=gene-HMPREF2948_01925;Name=HMPREF2948_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01925 KV814710.1 Protein Homology CDS 101657 102880 . + 0 ID=cds-OFQ17715.1;Parent=gene-HMPREF2948_01925;Dbxref=NCBI_GP:OFQ17715.1;Name=OFQ17715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005577243.1;locus_tag=HMPREF2948_01925;product=type II secretion system protein F;protein_id=OFQ17715.1;transl_table=11 KV814710.1 Genbank gene 102877 103554 . + . ID=gene-HMPREF2948_01930;Name=HMPREF2948_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01930 KV814710.1 Protein Homology CDS 102877 103554 . + 0 ID=cds-OFQ17716.1;Parent=gene-HMPREF2948_01930;Dbxref=NCBI_GP:OFQ17716.1;Name=OFQ17716.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697891.1;locus_tag=HMPREF2948_01930;product=peptidase A24;protein_id=OFQ17716.1;transl_table=11 KV814710.1 Genbank gene 103641 104261 . + . ID=gene-HMPREF2948_01935;Name=HMPREF2948_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01935 KV814710.1 Protein Homology CDS 103641 104261 . + 0 ID=cds-OFQ17717.1;Parent=gene-HMPREF2948_01935;Dbxref=NCBI_GP:OFQ17717.1;Name=OFQ17717.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645810.1;locus_tag=HMPREF2948_01935;product=dephospho-CoA kinase;protein_id=OFQ17717.1;transl_table=11 KV814710.1 Genbank gene 104254 104460 . + . ID=gene-HMPREF2948_01940;Name=HMPREF2948_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01940 KV814710.1 Protein Homology CDS 104254 104460 . + 0 ID=cds-OFQ17718.1;Parent=gene-HMPREF2948_01940;Dbxref=NCBI_GP:OFQ17718.1;Name=OFQ17718.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634195.1;locus_tag=HMPREF2948_01940;product=DNA gyrase inhibitor;protein_id=OFQ17718.1;transl_table=11 KV814710.1 Genbank gene 104457 104738 . + . ID=gene-HMPREF2948_01945;Name=HMPREF2948_01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01945 KV814710.1 Protein Homology CDS 104457 104738 . + 0 ID=cds-OFQ17719.1;Parent=gene-HMPREF2948_01945;Dbxref=NCBI_GP:OFQ17719.1;Name=OFQ17719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697815.1;locus_tag=HMPREF2948_01945;product=acetyltransferase;protein_id=OFQ17719.1;transl_table=11 KV814710.1 Genbank gene 104828 106087 . + . ID=gene-HMPREF2948_01950;Name=HMPREF2948_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01950 KV814710.1 Protein Homology CDS 104828 106087 . + 0 ID=cds-OFQ17720.1;Parent=gene-HMPREF2948_01950;Dbxref=NCBI_GP:OFQ17720.1;Name=OFQ17720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697880.1;locus_tag=HMPREF2948_01950;product=RNA helicase;protein_id=OFQ17720.1;transl_table=11 KV814710.1 Genbank gene 106128 106616 . - . ID=gene-HMPREF2948_01955;Name=HMPREF2948_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01955 KV814710.1 Protein Homology CDS 106128 106616 . - 0 ID=cds-OFQ17721.1;Parent=gene-HMPREF2948_01955;Dbxref=NCBI_GP:OFQ17721.1;Name=OFQ17721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005725048.1;locus_tag=HMPREF2948_01955;product=rod shape-determining protein MreD;protein_id=OFQ17721.1;transl_table=11 KV814710.1 Genbank gene 106616 107680 . - . ID=gene-HMPREF2948_01960;Name=HMPREF2948_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01960 KV814710.1 Protein Homology CDS 106616 107680 . - 0 ID=cds-OFQ17722.1;Parent=gene-HMPREF2948_01960;Dbxref=NCBI_GP:OFQ17722.1;Name=OFQ17722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687477.1;locus_tag=HMPREF2948_01960;product=rod shape-determining protein MreC;protein_id=OFQ17722.1;transl_table=11 KV814710.1 Genbank gene 107767 108822 . - . ID=gene-HMPREF2948_01965;Name=HMPREF2948_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01965 KV814710.1 Protein Homology CDS 107767 108822 . - 0 ID=cds-OFQ17723.1;Parent=gene-HMPREF2948_01965;Dbxref=NCBI_GP:OFQ17723.1;Name=OFQ17723.1;Note=functions in MreBCD complex in some organisms;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657804.1;locus_tag=HMPREF2948_01965;product=rod shape-determining protein;protein_id=OFQ17723.1;transl_table=11 KV814710.1 Genbank gene 108994 110784 . - . ID=gene-HMPREF2948_01970;Name=HMPREF2948_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01970 KV814710.1 Protein Homology CDS 108994 110784 . - 0 ID=cds-OFQ17724.1;Parent=gene-HMPREF2948_01970;Dbxref=NCBI_GP:OFQ17724.1;Name=OFQ17724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064070.1;locus_tag=HMPREF2948_01970;product=ABC transporter ATP-binding protein;protein_id=OFQ17724.1;transl_table=11 KV814710.1 Genbank gene 110950 112602 . + . ID=gene-HMPREF2948_01975;Name=HMPREF2948_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01975 KV814710.1 Protein Homology CDS 110950 112602 . + 0 ID=cds-OFQ17725.1;Parent=gene-HMPREF2948_01975;Dbxref=NCBI_GP:OFQ17725.1;Name=OFQ17725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005710205.1;locus_tag=HMPREF2948_01975;product=transporter;protein_id=OFQ17725.1;transl_table=11 KV814710.1 Genbank gene 112753 113061 . + . ID=gene-HMPREF2948_01980;Name=HMPREF2948_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01980 KV814710.1 Protein Homology CDS 112753 113061 . + 0 ID=cds-OFQ17726.1;Parent=gene-HMPREF2948_01980;Dbxref=NCBI_GP:OFQ17726.1;Name=OFQ17726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635481.1;locus_tag=HMPREF2948_01980;product=ribosome silencing factor RsfS;protein_id=OFQ17726.1;transl_table=11 KV814710.1 Genbank gene 113101 113568 . + . ID=gene-HMPREF2948_01985;Name=HMPREF2948_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01985 KV814710.1 Protein Homology CDS 113101 113568 . + 0 ID=cds-OFQ17727.1;Parent=gene-HMPREF2948_01985;Dbxref=NCBI_GP:OFQ17727.1;Name=OFQ17727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649848.1;locus_tag=HMPREF2948_01985;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=OFQ17727.1;transl_table=11 KV814710.1 Genbank gene 113584 115560 . + . ID=gene-HMPREF2948_01990;Name=HMPREF2948_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01990 KV814710.1 Protein Homology CDS 113584 115560 . + 0 ID=cds-OFQ17728.1;Parent=gene-HMPREF2948_01990;Dbxref=NCBI_GP:OFQ17728.1;Name=OFQ17728.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771722.1;locus_tag=HMPREF2948_01990;product=penicillin-binding protein 2;protein_id=OFQ17728.1;transl_table=11 KV814710.1 Genbank gene 115560 116675 . + . ID=gene-HMPREF2948_01995;Name=HMPREF2948_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_01995 KV814710.1 Protein Homology CDS 115560 116675 . + 0 ID=cds-OFQ17729.1;Parent=gene-HMPREF2948_01995;Dbxref=NCBI_GP:OFQ17729.1;Name=OFQ17729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628767.1;locus_tag=HMPREF2948_01995;product=rod shape-determining protein RodA;protein_id=OFQ17729.1;transl_table=11 KV814710.1 Genbank gene 116730 117590 . + . ID=gene-HMPREF2948_02000;Name=HMPREF2948_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02000 KV814710.1 Protein Homology CDS 116730 117590 . + 0 ID=cds-OFQ17730.1;Parent=gene-HMPREF2948_02000;Dbxref=NCBI_GP:OFQ17730.1;Name=OFQ17730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699977.1;locus_tag=HMPREF2948_02000;product=rare lipoprotein A;protein_id=OFQ17730.1;transl_table=11 KV814710.1 Genbank gene 117609 118796 . + . ID=gene-HMPREF2948_02005;Name=HMPREF2948_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02005 KV814710.1 Protein Homology CDS 117609 118796 . + 0 ID=cds-OFQ17731.1;Parent=gene-HMPREF2948_02005;Dbxref=NCBI_GP:OFQ17731.1;Name=OFQ17731.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005558472.1;locus_tag=HMPREF2948_02005;product=D-alanyl-D-alanine carboxypeptidase;protein_id=OFQ17731.1;transl_table=11 KV814710.1 Genbank gene 118904 119182 . + . ID=gene-HMPREF2948_02010;Name=HMPREF2948_02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02010 KV814710.1 Protein Homology CDS 118904 119182 . + 0 ID=cds-OFQ17732.1;Parent=gene-HMPREF2948_02010;Dbxref=NCBI_GP:OFQ17732.1;Name=OFQ17732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44465.1;locus_tag=HMPREF2948_02010;product=hypothetical protein;protein_id=OFQ17732.1;transl_table=11 KV814710.1 Genbank gene 119184 119825 . + . ID=gene-HMPREF2948_02015;Name=HMPREF2948_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02015 KV814710.1 Protein Homology CDS 119184 119825 . + 0 ID=cds-OFQ17733.1;Parent=gene-HMPREF2948_02015;Dbxref=NCBI_GP:OFQ17733.1;Name=OFQ17733.1;Note=lipoyl/octanoyltransferase%3B catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697810.1;locus_tag=HMPREF2948_02015;product=octanoyltransferase;protein_id=OFQ17733.1;transl_table=11 KV814710.1 Genbank gene 119887 120849 . + . ID=gene-HMPREF2948_02020;Name=HMPREF2948_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02020 KV814710.1 Protein Homology CDS 119887 120849 . + 0 ID=cds-OFQ17734.1;Parent=gene-HMPREF2948_02020;Dbxref=NCBI_GP:OFQ17734.1;Name=OFQ17734.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652627.1;locus_tag=HMPREF2948_02020;product=lipoyl synthase;protein_id=OFQ17734.1;transl_table=11 KV814710.1 Genbank gene 120920 122944 . - . ID=gene-HMPREF2948_02025;Name=HMPREF2948_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02025 KV814710.1 Protein Homology CDS 120920 122944 . - 0 ID=cds-OFQ17735.1;Parent=gene-HMPREF2948_02025;Dbxref=NCBI_GP:OFQ17735.1;Name=OFQ17735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699998.1;locus_tag=HMPREF2948_02025;product=hypothetical protein;protein_id=OFQ17735.1;transl_table=11 KV814710.1 Genbank gene 123042 123686 . - . ID=gene-HMPREF2948_02030;Name=HMPREF2948_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02030 KV814710.1 Protein Homology CDS 123042 123686 . - 0 ID=cds-OFQ17736.1;Parent=gene-HMPREF2948_02030;Dbxref=NCBI_GP:OFQ17736.1;Name=OFQ17736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649108.1;locus_tag=HMPREF2948_02030;product=adenylate kinase;protein_id=OFQ17736.1;transl_table=11 KV814710.1 Genbank gene 123785 125059 . - . ID=gene-HMPREF2948_02035;Name=HMPREF2948_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02035 KV814710.1 Protein Homology CDS 123785 125059 . - 0 ID=cds-OFQ17737.1;Parent=gene-HMPREF2948_02035;Dbxref=NCBI_GP:OFQ17737.1;Name=OFQ17737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697909.1;locus_tag=HMPREF2948_02035;product=AmpG family muropeptide MFS transporter;protein_id=OFQ17737.1;transl_table=11 KV814710.1 Genbank gene 125140 126156 . - . ID=gene-HMPREF2948_02040;Name=HMPREF2948_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02040 KV814710.1 Protein Homology CDS 125140 126156 . - 0 ID=cds-OFQ17738.1;Parent=gene-HMPREF2948_02040;Dbxref=NCBI_GP:OFQ17738.1;Name=OFQ17738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P24325.2;locus_tag=HMPREF2948_02040;product=UDP-glucose 4-epimerase GalE;protein_id=OFQ17738.1;transl_table=11 KV814710.1 Genbank gene 126361 129585 . + . ID=gene-HMPREF2948_02045;Name=HMPREF2948_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02045 KV814710.1 Protein Homology CDS 126361 129585 . + 0 ID=cds-OFQ17739.1;Parent=gene-HMPREF2948_02045;Dbxref=NCBI_GP:OFQ17739.1;Name=OFQ17739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699982.1;locus_tag=HMPREF2948_02045;product=serine protease;protein_id=OFQ17739.1;transl_table=11 KV814710.1 Genbank pseudogene 129670 130263 . - . ID=gene-HMPREF2948_02050;Name=HMPREF2948_02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_02050;pseudo=true KV814710.1 Protein Homology CDS 129670 130263 . - 0 ID=cds-HMPREF2948_02050;Parent=gene-HMPREF2948_02050;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961786.1;locus_tag=HMPREF2948_02050;product=S-formylglutathione hydrolase;pseudo=true;transl_table=11 KV814710.1 Genbank pseudogene 130204 130869 . + . ID=gene-HMPREF2948_02055;Name=HMPREF2948_02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_02055;pseudo=true KV814710.1 Protein Homology CDS 130204 130869 . + 0 ID=cds-HMPREF2948_02055;Parent=gene-HMPREF2948_02055;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005820967.1;locus_tag=HMPREF2948_02055;product=tRNA pseudouridine(65) synthase TruC;pseudo=true;transl_table=11 KV814710.1 Genbank gene 131062 131538 . + . ID=gene-HMPREF2948_02060;Name=HMPREF2948_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02060 KV814710.1 Protein Homology CDS 131062 131538 . + 0 ID=cds-OFQ17740.1;Parent=gene-HMPREF2948_02060;Dbxref=NCBI_GP:OFQ17740.1;Name=OFQ17740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708630.1;locus_tag=HMPREF2948_02060;product=hypothetical protein;protein_id=OFQ17740.1;transl_table=11 KV814710.1 Genbank pseudogene 131670 132099 . - . ID=gene-HMPREF2948_02065;Name=HMPREF2948_02065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_02065;pseudo=true KV814710.1 Protein Homology CDS 131670 132099 . - 0 ID=cds-HMPREF2948_02065;Parent=gene-HMPREF2948_02065;Note=catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione%3B also catalyzes the formation of aldehyde or ketone from alcohols%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694101.1;locus_tag=HMPREF2948_02065;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;pseudo=true;transl_table=11 KV814710.1 Genbank gene 132111 132518 . + . ID=gene-HMPREF2948_02070;Name=HMPREF2948_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02070 KV814710.1 Protein Homology CDS 132111 132518 . + 0 ID=cds-OFQ17741.1;Parent=gene-HMPREF2948_02070;Dbxref=NCBI_GP:OFQ17741.1;Name=OFQ17741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700000.1;locus_tag=HMPREF2948_02070;product=MerR family transcriptional regulator;protein_id=OFQ17741.1;transl_table=11 KV814710.1 Genbank gene 132634 133164 . - . ID=gene-HMPREF2948_02075;Name=HMPREF2948_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02075 KV814710.1 Protein Homology CDS 132634 133164 . - 0 ID=cds-OFQ17742.1;Parent=gene-HMPREF2948_02075;Dbxref=NCBI_GP:OFQ17742.1;Name=OFQ17742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9JVG3.1;locus_tag=HMPREF2948_02075;product=inorganic pyrophosphatase;protein_id=OFQ17742.1;transl_table=11 KV814710.1 Genbank gene 133366 134682 . + . ID=gene-HMPREF2948_02080;Name=HMPREF2948_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02080 KV814710.1 Protein Homology CDS 133366 134682 . + 0 ID=cds-OFQ17743.1;Parent=gene-HMPREF2948_02080;Dbxref=NCBI_GP:OFQ17743.1;Name=OFQ17743.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637490.1;locus_tag=HMPREF2948_02080;product=permease;protein_id=OFQ17743.1;transl_table=11 KV814710.1 Genbank gene 134862 136241 . + . ID=gene-HMPREF2948_02085;Name=HMPREF2948_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02085 KV814710.1 Protein Homology CDS 134862 136241 . + 0 ID=cds-OFQ17744.1;Parent=gene-HMPREF2948_02085;Dbxref=NCBI_GP:OFQ17744.1;Name=OFQ17744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500894.1;locus_tag=HMPREF2948_02085;product=U32 family peptidase;protein_id=OFQ17744.1;transl_table=11 KV814710.1 Genbank gene 136755 137858 . + . ID=gene-HMPREF2948_02090;Name=HMPREF2948_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02090 KV814710.1 GeneMarkS+ CDS 136755 137858 . + 0 ID=cds-OFQ17745.1;Parent=gene-HMPREF2948_02090;Dbxref=NCBI_GP:OFQ17745.1;Name=OFQ17745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_02090;product=hypothetical protein;protein_id=OFQ17745.1;transl_table=11 KV814710.1 Genbank gene 138422 139513 . + . ID=gene-HMPREF2948_02095;Name=HMPREF2948_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02095 KV814710.1 Protein Homology CDS 138422 139513 . + 0 ID=cds-OFQ17746.1;Parent=gene-HMPREF2948_02095;Dbxref=NCBI_GP:OFQ17746.1;Name=OFQ17746.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P57832.1;locus_tag=HMPREF2948_02095;product=S-adenosylmethionine:tRNA ribosyltransferase-isomerase;protein_id=OFQ17746.1;transl_table=11 KV814710.1 Genbank gene 139624 140772 . + . ID=gene-HMPREF2948_02100;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=HMPREF2948_02100 KV814710.1 Protein Homology CDS 139624 140772 . + 0 ID=cds-OFQ17747.1;Parent=gene-HMPREF2948_02100;Dbxref=NCBI_GP:OFQ17747.1;Name=OFQ17747.1;Note=Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr);gbkey=CDS;gene=tgt;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645731.1;locus_tag=HMPREF2948_02100;product=tRNA-guanine(34) transglycosylase;protein_id=OFQ17747.1;transl_table=11 KV814710.1 Genbank gene 140837 141349 . + . ID=gene-HMPREF2948_02105;Name=HMPREF2948_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02105 KV814710.1 Protein Homology CDS 140837 141349 . + 0 ID=cds-OFQ17748.1;Parent=gene-HMPREF2948_02105;Dbxref=NCBI_GP:OFQ17748.1;Name=OFQ17748.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064086.1;locus_tag=HMPREF2948_02105;product=hypothetical protein;protein_id=OFQ17748.1;transl_table=11 KV814710.1 Genbank gene 141353 141580 . + . ID=gene-HMPREF2948_02110;Name=HMPREF2948_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02110 KV814710.1 Protein Homology CDS 141353 141580 . + 0 ID=cds-OFQ17749.1;Parent=gene-HMPREF2948_02110;Dbxref=NCBI_GP:OFQ17749.1;Name=OFQ17749.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064087.1;locus_tag=HMPREF2948_02110;product=hypothetical protein;protein_id=OFQ17749.1;transl_table=11 KV814710.1 Genbank gene 141683 141973 . + . ID=gene-HMPREF2948_02115;Name=HMPREF2948_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02115 KV814710.1 Protein Homology CDS 141683 141973 . + 0 ID=cds-OFQ17750.1;Parent=gene-HMPREF2948_02115;Dbxref=NCBI_GP:OFQ17750.1;Name=OFQ17750.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626741.1;locus_tag=HMPREF2948_02115;product=preprotein translocase subunit YajC;protein_id=OFQ17750.1;transl_table=11 KV814710.1 Genbank gene 141997 143847 . + . ID=gene-HMPREF2948_02120;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=HMPREF2948_02120 KV814710.1 Protein Homology CDS 141997 143847 . + 0 ID=cds-OFQ17751.1;Parent=gene-HMPREF2948_02120;Dbxref=NCBI_GP:OFQ17751.1;Name=OFQ17751.1;Note=part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane;gbkey=CDS;gene=secD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014702293.1;locus_tag=HMPREF2948_02120;product=preprotein translocase subunit SecD;protein_id=OFQ17751.1;transl_table=11 KV814710.1 Genbank gene 143858 144832 . + . ID=gene-HMPREF2948_02125;Name=HMPREF2948_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02125 KV814710.1 Protein Homology CDS 143858 144832 . + 0 ID=cds-OFQ17752.1;Parent=gene-HMPREF2948_02125;Dbxref=NCBI_GP:OFQ17752.1;Name=OFQ17752.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631058.1;locus_tag=HMPREF2948_02125;product=preprotein translocase subunit SecF;protein_id=OFQ17752.1;transl_table=11 KV814710.1 Genbank gene 144914 145954 . - . ID=gene-HMPREF2948_02130;Name=HMPREF2948_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02130 KV814710.1 Protein Homology CDS 144914 145954 . - 0 ID=cds-OFQ17753.1;Parent=gene-HMPREF2948_02130;Dbxref=NCBI_GP:OFQ17753.1;Name=OFQ17753.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694337.1;locus_tag=HMPREF2948_02130;product=hypothetical protein;protein_id=OFQ17753.1;transl_table=11 KV814710.1 Genbank gene 145954 146292 . - . ID=gene-HMPREF2948_02135;Name=HMPREF2948_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02135 KV814710.1 Protein Homology CDS 145954 146292 . - 0 ID=cds-OFQ17754.1;Parent=gene-HMPREF2948_02135;Dbxref=NCBI_GP:OFQ17754.1;Name=OFQ17754.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017373484.1;locus_tag=HMPREF2948_02135;product=transcriptional regulator;protein_id=OFQ17754.1;transl_table=11 KV814710.1 Genbank gene 146294 146887 . - . ID=gene-HMPREF2948_02140;Name=mogA;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=HMPREF2948_02140 KV814710.1 Protein Homology CDS 146294 146887 . - 0 ID=cds-OFQ17755.1;Parent=gene-HMPREF2948_02140;Dbxref=NCBI_GP:OFQ17755.1;Name=OFQ17755.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44645.1;locus_tag=HMPREF2948_02140;product=molybdopterin adenylyltransferase;protein_id=OFQ17755.1;transl_table=11 KV814710.1 Genbank gene 147000 149570 . - . ID=gene-HMPREF2948_02145;Name=HMPREF2948_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02145 KV814710.1 Protein Homology CDS 147000 149570 . - 0 ID=cds-OFQ17756.1;Parent=gene-HMPREF2948_02145;Dbxref=NCBI_GP:OFQ17756.1;Name=OFQ17756.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167565.1;locus_tag=HMPREF2948_02145;product=ATP-dependent chaperone ClpB;protein_id=OFQ17756.1;transl_table=11 KV814710.1 Genbank gene 149701 150273 . - . ID=gene-HMPREF2948_02150;Name=HMPREF2948_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02150 KV814710.1 Protein Homology CDS 149701 150273 . - 0 ID=cds-OFQ17782.1;Parent=gene-HMPREF2948_02150;Dbxref=NCBI_GP:OFQ17782.1;Name=OFQ17782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697907.1;locus_tag=HMPREF2948_02150;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=OFQ17782.1;transl_table=11 KV814710.1 Genbank gene 150300 150497 . - . ID=gene-HMPREF2948_02155;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=HMPREF2948_02155 KV814710.1 cmsearch ncRNA 150300 150497 . - . ID=rna-HMPREF2948_02155;Parent=gene-HMPREF2948_02155;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_02155;product=6S RNA KV814710.1 cmsearch exon 150300 150497 . - . ID=exon-HMPREF2948_02155-1;Parent=rna-HMPREF2948_02155;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_02155;product=6S RNA KV814710.1 Genbank gene 150588 151379 . - . ID=gene-HMPREF2948_02160;Name=HMPREF2948_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02160 KV814710.1 Protein Homology CDS 150588 151379 . - 0 ID=cds-OFQ17757.1;Parent=gene-HMPREF2948_02160;Dbxref=NCBI_GP:OFQ17757.1;Name=OFQ17757.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700035.1;locus_tag=HMPREF2948_02160;product=outer membrane assembly protein BamD;protein_id=OFQ17757.1;transl_table=11 KV814710.1 Genbank gene 151489 152463 . + . ID=gene-HMPREF2948_02165;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=HMPREF2948_02165 KV814710.1 Protein Homology CDS 151489 152463 . + 0 ID=cds-OFQ17758.1;Parent=gene-HMPREF2948_02165;Dbxref=NCBI_GP:OFQ17758.1;Name=OFQ17758.1;Note=responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA;gbkey=CDS;gene=rluD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805410.1;locus_tag=HMPREF2948_02165;product=23S rRNA pseudouridylate synthase;protein_id=OFQ17758.1;transl_table=11 KV814710.1 Genbank gene 152465 153202 . + . ID=gene-HMPREF2948_02170;Name=HMPREF2948_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02170 KV814710.1 Protein Homology CDS 152465 153202 . + 0 ID=cds-OFQ17759.1;Parent=gene-HMPREF2948_02170;Dbxref=NCBI_GP:OFQ17759.1;Name=OFQ17759.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695458.1;locus_tag=HMPREF2948_02170;product=laccase;protein_id=OFQ17759.1;transl_table=11 KV814710.1 Genbank gene 153251 153670 . - . ID=gene-HMPREF2948_02175;Name=HMPREF2948_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02175 KV814710.1 Protein Homology CDS 153251 153670 . - 0 ID=cds-OFQ17760.1;Parent=gene-HMPREF2948_02175;Dbxref=NCBI_GP:OFQ17760.1;Name=OFQ17760.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695457.1;locus_tag=HMPREF2948_02175;product=crossover junction endodeoxyribonuclease RuvA;protein_id=OFQ17760.1;transl_table=11 KV814710.1 Genbank gene 153670 154230 . - . ID=gene-HMPREF2948_02180;Name=HMPREF2948_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02180 KV814710.1 Protein Homology CDS 153670 154230 . - 0 ID=cds-OFQ17761.1;Parent=gene-HMPREF2948_02180;Dbxref=NCBI_GP:OFQ17761.1;Name=OFQ17761.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694360.1;locus_tag=HMPREF2948_02180;product=hypothetical protein;protein_id=OFQ17761.1;transl_table=11 KV814710.1 Genbank gene 154230 154964 . - . ID=gene-HMPREF2948_02185;Name=HMPREF2948_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02185 KV814710.1 Protein Homology CDS 154230 154964 . - 0 ID=cds-OFQ17762.1;Parent=gene-HMPREF2948_02185;Dbxref=NCBI_GP:OFQ17762.1;Name=OFQ17762.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44627.1;locus_tag=HMPREF2948_02185;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=OFQ17762.1;transl_table=11 KV814710.1 Genbank gene 155034 155753 . - . ID=gene-HMPREF2948_02190;Name=HMPREF2948_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02190 KV814710.1 Protein Homology CDS 155034 155753 . - 0 ID=cds-OFQ17763.1;Parent=gene-HMPREF2948_02190;Dbxref=NCBI_GP:OFQ17763.1;Name=OFQ17763.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44705.1;locus_tag=HMPREF2948_02190;product=fatty acid metabolism transcriptional regulator FadR;protein_id=OFQ17763.1;transl_table=11 KV814710.1 Genbank gene 155887 157425 . + . ID=gene-HMPREF2948_02195;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=HMPREF2948_02195 KV814710.1 Protein Homology CDS 155887 157425 . + 0 ID=cds-OFQ17764.1;Parent=gene-HMPREF2948_02195;Dbxref=NCBI_GP:OFQ17764.1;Name=OFQ17764.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QNB8.2;locus_tag=HMPREF2948_02195;product=Na+/H+ antiporter NhaB;protein_id=OFQ17764.1;transl_table=11 KV814710.1 Genbank gene 157445 157978 . + . ID=gene-HMPREF2948_02200;Name=HMPREF2948_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02200 KV814710.1 Protein Homology CDS 157445 157978 . + 0 ID=cds-OFQ17765.1;Parent=gene-HMPREF2948_02200;Dbxref=NCBI_GP:OFQ17765.1;Name=OFQ17765.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697870.1;locus_tag=HMPREF2948_02200;product=disulfide bond formation protein B;protein_id=OFQ17765.1;transl_table=11 KV814710.1 Genbank gene 158053 158328 . - . ID=gene-HMPREF2948_02205;Name=HMPREF2948_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02205 KV814710.1 Protein Homology CDS 158053 158328 . - 0 ID=cds-OFQ17766.1;Parent=gene-HMPREF2948_02205;Dbxref=NCBI_GP:OFQ17766.1;Name=OFQ17766.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695450.1;locus_tag=HMPREF2948_02205;product=hypothetical protein;protein_id=OFQ17766.1;transl_table=11 KV814710.1 Genbank gene 158328 159590 . - . ID=gene-HMPREF2948_02210;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=HMPREF2948_02210 KV814710.1 Protein Homology CDS 158328 159590 . - 0 ID=cds-OFQ17767.1;Parent=gene-HMPREF2948_02210;Dbxref=NCBI_GP:OFQ17767.1;Name=OFQ17767.1;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate;gbkey=CDS;gene=glyA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005620912.1;locus_tag=HMPREF2948_02210;product=serine hydroxymethyltransferase;protein_id=OFQ17767.1;transl_table=11 KV814710.1 Genbank gene 159706 160275 . - . ID=gene-HMPREF2948_02215;Name=HMPREF2948_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02215 KV814710.1 Protein Homology CDS 159706 160275 . - 0 ID=cds-OFQ17768.1;Parent=gene-HMPREF2948_02215;Dbxref=NCBI_GP:OFQ17768.1;Name=OFQ17768.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525967.1;locus_tag=HMPREF2948_02215;product=hypothetical protein;protein_id=OFQ17768.1;transl_table=11 KV814710.1 Genbank gene 160339 161562 . - . ID=gene-HMPREF2948_02220;Name=HMPREF2948_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02220 KV814710.1 Protein Homology CDS 160339 161562 . - 0 ID=cds-OFQ17769.1;Parent=gene-HMPREF2948_02220;Dbxref=NCBI_GP:OFQ17769.1;Name=OFQ17769.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064108.1;locus_tag=HMPREF2948_02220;product=hypothetical protein;protein_id=OFQ17769.1;transl_table=11 KV814710.1 Genbank gene 161587 162876 . - . ID=gene-HMPREF2948_02225;Name=HMPREF2948_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02225 KV814710.1 Protein Homology CDS 161587 162876 . - 0 ID=cds-OFQ17770.1;Parent=gene-HMPREF2948_02225;Dbxref=NCBI_GP:OFQ17770.1;Name=OFQ17770.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499744.1;locus_tag=HMPREF2948_02225;product=phosphoribosylamine--glycine ligase;protein_id=OFQ17770.1;transl_table=11 KV814710.1 Genbank gene 163057 164655 . - . ID=gene-HMPREF2948_02230;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=HMPREF2948_02230 KV814710.1 Protein Homology CDS 163057 164655 . - 0 ID=cds-OFQ17771.1;Parent=gene-HMPREF2948_02230;Dbxref=NCBI_GP:OFQ17771.1;Name=OFQ17771.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064110.1;locus_tag=HMPREF2948_02230;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase;protein_id=OFQ17771.1;transl_table=11 KV814710.1 Genbank gene 164834 165232 . - . ID=gene-HMPREF2948_02235;Name=HMPREF2948_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02235 KV814710.1 Protein Homology CDS 164834 165232 . - 0 ID=cds-OFQ17772.1;Parent=gene-HMPREF2948_02235;Dbxref=NCBI_GP:OFQ17772.1;Name=OFQ17772.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697887.1;locus_tag=HMPREF2948_02235;product=hypothetical protein;protein_id=OFQ17772.1;transl_table=11 KV814710.1 Genbank gene 165343 167109 . - . ID=gene-HMPREF2948_02240;Name=HMPREF2948_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02240 KV814710.1 Protein Homology CDS 165343 167109 . - 0 ID=cds-OFQ17773.1;Parent=gene-HMPREF2948_02240;Dbxref=NCBI_GP:OFQ17773.1;Name=OFQ17773.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700017.1;locus_tag=HMPREF2948_02240;product=protein-disulfide reductase DsbD;protein_id=OFQ17773.1;transl_table=11 KV814710.1 Genbank gene 167289 168002 . + . ID=gene-HMPREF2948_02245;Name=HMPREF2948_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02245 KV814710.1 Protein Homology CDS 167289 168002 . + 0 ID=cds-OFQ17774.1;Parent=gene-HMPREF2948_02245;Dbxref=NCBI_GP:OFQ17774.1;Name=OFQ17774.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064113.1;locus_tag=HMPREF2948_02245;product=DNA-binding response regulator;protein_id=OFQ17774.1;transl_table=11 KV814710.1 Genbank gene 168115 168597 . + . ID=gene-HMPREF2948_02250;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=HMPREF2948_02250 KV814710.1 Protein Homology CDS 168115 168597 . + 0 ID=cds-OFQ17775.1;Parent=gene-HMPREF2948_02250;Dbxref=NCBI_GP:OFQ17775.1;Name=OFQ17775.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019518432.1;locus_tag=HMPREF2948_02250;product=SsrA-binding protein;protein_id=OFQ17775.1;transl_table=11 KV814710.1 Genbank gene 168758 169024 . + . ID=gene-HMPREF2948_02255;Name=HMPREF2948_02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02255 KV814710.1 Protein Homology CDS 168758 169024 . + 0 ID=cds-OFQ17776.1;Parent=gene-HMPREF2948_02255;Dbxref=NCBI_GP:OFQ17776.1;Name=OFQ17776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017806983.1;locus_tag=HMPREF2948_02255;product=50S ribosomal protein L31;protein_id=OFQ17776.1;transl_table=11 KV814710.1 Genbank gene 169034 169171 . + . ID=gene-HMPREF2948_02260;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=HMPREF2948_02260 KV814710.1 Protein Homology CDS 169034 169171 . + 0 ID=cds-OFQ17777.1;Parent=gene-HMPREF2948_02260;Dbxref=NCBI_GP:OFQ17777.1;Name=OFQ17777.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group do not have the motif;gbkey=CDS;gene=rpmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695435.1;locus_tag=HMPREF2948_02260;product=50S ribosomal protein L36;protein_id=OFQ17777.1;transl_table=11 ##sequence-region KV814711.1 1 4885 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814711.1 Genbank region 1 4885 . + . ID=KV814711.1:1..4885;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814711.1 Genbank gene 132 950 . + . ID=gene-HMPREF2948_02265;Name=HMPREF2948_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02265 KV814711.1 Protein Homology CDS 132 950 . + 0 ID=cds-OFQ17467.1;Parent=gene-HMPREF2948_02265;Dbxref=NCBI_GP:OFQ17467.1;Name=OFQ17467.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695047.1;locus_tag=HMPREF2948_02265;product=hypothetical protein;protein_id=OFQ17467.1;transl_table=11 KV814711.1 Genbank gene 951 1346 . + . ID=gene-HMPREF2948_02270;Name=HMPREF2948_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02270 KV814711.1 Protein Homology CDS 951 1346 . + 0 ID=cds-OFQ17468.1;Parent=gene-HMPREF2948_02270;Dbxref=NCBI_GP:OFQ17468.1;Name=OFQ17468.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695048.1;locus_tag=HMPREF2948_02270;product=chromosome condensation protein CrcB;protein_id=OFQ17468.1;transl_table=11 KV814711.1 Genbank gene 1321 1773 . - . ID=gene-HMPREF2948_02275;Name=HMPREF2948_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02275 KV814711.1 Protein Homology CDS 1321 1773 . - 0 ID=cds-OFQ17469.1;Parent=gene-HMPREF2948_02275;Dbxref=NCBI_GP:OFQ17469.1;Name=OFQ17469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704799.1;locus_tag=HMPREF2948_02275;product=recombinase RecX;protein_id=OFQ17469.1;transl_table=11 KV814711.1 Genbank gene 1843 2898 . - . ID=gene-HMPREF2948_02280;Name=HMPREF2948_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02280 KV814711.1 Protein Homology CDS 1843 2898 . - 0 ID=cds-OFQ17470.1;Parent=gene-HMPREF2948_02280;Dbxref=NCBI_GP:OFQ17470.1;Name=OFQ17470.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651076.1;locus_tag=HMPREF2948_02280;product=DNA recombination/repair protein RecA;protein_id=OFQ17470.1;transl_table=11 KV814711.1 Genbank gene 3035 3877 . - . ID=gene-HMPREF2948_02285;Name=HMPREF2948_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02285 KV814711.1 Protein Homology CDS 3035 3877 . - 0 ID=cds-OFQ17471.1;Parent=gene-HMPREF2948_02285;Dbxref=NCBI_GP:OFQ17471.1;Name=OFQ17471.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699077.1;locus_tag=HMPREF2948_02285;product=patatin family protein;protein_id=OFQ17471.1;transl_table=11 KV814711.1 Genbank gene 4233 4775 . + . ID=gene-HMPREF2948_02290;Name=HMPREF2948_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02290 KV814711.1 Protein Homology CDS 4233 4775 . + 0 ID=cds-OFQ17472.1;Parent=gene-HMPREF2948_02290;Dbxref=NCBI_GP:OFQ17472.1;Name=OFQ17472.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654957.1;locus_tag=HMPREF2948_02290;product=DNA transformation protein;protein_id=OFQ17472.1;transl_table=11 ##sequence-region KV814712.1 1 46352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814712.1 Genbank region 1 46352 . + . ID=KV814712.1:1..46352;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814712.1 Genbank gene 298 1719 . - . ID=gene-HMPREF2948_02295;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=HMPREF2948_02295 KV814712.1 Protein Homology CDS 298 1719 . - 0 ID=cds-OFQ20584.1;Parent=gene-HMPREF2948_02295;Dbxref=NCBI_GP:OFQ20584.1;Name=OFQ20584.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065388.1;locus_tag=HMPREF2948_02295;product=exodeoxyribonuclease I;protein_id=OFQ20584.1;transl_table=11 KV814712.1 Genbank gene 1722 2594 . - . ID=gene-HMPREF2948_02300;Name=HMPREF2948_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02300 KV814712.1 Protein Homology CDS 1722 2594 . - 0 ID=cds-OFQ20585.1;Parent=gene-HMPREF2948_02300;Dbxref=NCBI_GP:OFQ20585.1;Name=OFQ20585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005703152.1;locus_tag=HMPREF2948_02300;product=hypothetical protein;protein_id=OFQ20585.1;transl_table=11 KV814712.1 Genbank gene 2665 7182 . - . ID=gene-HMPREF2948_02305;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=HMPREF2948_02305 KV814712.1 Protein Homology CDS 2665 7182 . - 0 ID=cds-OFQ20586.1;Parent=gene-HMPREF2948_02305;Dbxref=NCBI_GP:OFQ20586.1;Name=OFQ20586.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691995.1;locus_tag=HMPREF2948_02305;product=cell division protein MukB;protein_id=OFQ20586.1;transl_table=11 KV814712.1 Genbank gene 7182 7934 . - . ID=gene-HMPREF2948_02310;Name=HMPREF2948_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02310 KV814712.1 Protein Homology CDS 7182 7934 . - 0 ID=cds-OFQ20587.1;Parent=gene-HMPREF2948_02310;Dbxref=NCBI_GP:OFQ20587.1;Name=OFQ20587.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005556876.1;locus_tag=HMPREF2948_02310;product=condensin subunit E;protein_id=OFQ20587.1;transl_table=11 KV814712.1 Genbank gene 7981 9315 . - . ID=gene-HMPREF2948_02315;Name=HMPREF2948_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02315 KV814712.1 Protein Homology CDS 7981 9315 . - 0 ID=cds-OFQ20588.1;Parent=gene-HMPREF2948_02315;Dbxref=NCBI_GP:OFQ20588.1;Name=OFQ20588.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869195.1;locus_tag=HMPREF2948_02315;product=chromosome partition protein MukF;protein_id=OFQ20588.1;transl_table=11 KV814712.1 Genbank gene 9740 10513 . + . ID=gene-HMPREF2948_02320;Name=HMPREF2948_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02320 KV814712.1 Protein Homology CDS 9740 10513 . + 0 ID=cds-OFQ20589.1;Parent=gene-HMPREF2948_02320;Dbxref=NCBI_GP:OFQ20589.1;Name=OFQ20589.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525815.1;locus_tag=HMPREF2948_02320;product=transcriptional regulator;protein_id=OFQ20589.1;transl_table=11 KV814712.1 Genbank gene 10651 11574 . + . ID=gene-HMPREF2948_02325;Name=HMPREF2948_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02325 KV814712.1 Protein Homology CDS 10651 11574 . + 0 ID=cds-OFQ20590.1;Parent=gene-HMPREF2948_02325;Dbxref=NCBI_GP:OFQ20590.1;Name=OFQ20590.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525816.1;locus_tag=HMPREF2948_02325;product=universal stress protein UspE;protein_id=OFQ20590.1;transl_table=11 KV814712.1 Genbank gene 11771 12607 . + . ID=gene-HMPREF2948_02330;Name=HMPREF2948_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02330 KV814712.1 Protein Homology CDS 11771 12607 . + 0 ID=cds-OFQ20591.1;Parent=gene-HMPREF2948_02330;Dbxref=NCBI_GP:OFQ20591.1;Name=OFQ20591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500490.1;locus_tag=HMPREF2948_02330;product=hypothetical protein;protein_id=OFQ20591.1;transl_table=11 KV814712.1 Genbank gene 12647 13207 . - . ID=gene-HMPREF2948_02335;Name=HMPREF2948_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02335 KV814712.1 Protein Homology CDS 12647 13207 . - 0 ID=cds-OFQ20592.1;Parent=gene-HMPREF2948_02335;Dbxref=NCBI_GP:OFQ20592.1;Name=OFQ20592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005616339.1;locus_tag=HMPREF2948_02335;product=Rossman fold protein%2C TIGR00730 family;protein_id=OFQ20592.1;transl_table=11 KV814712.1 Genbank gene 13209 15815 . - . ID=gene-HMPREF2948_02340;Name=HMPREF2948_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02340 KV814712.1 Protein Homology CDS 13209 15815 . - 0 ID=cds-OFQ20593.1;Parent=gene-HMPREF2948_02340;Dbxref=NCBI_GP:OFQ20593.1;Name=OFQ20593.1;Note=catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693995.1;locus_tag=HMPREF2948_02340;product=DNA topoisomerase I subunit omega;protein_id=OFQ20593.1;transl_table=11 KV814712.1 Genbank gene 15913 16812 . + . ID=gene-HMPREF2948_02345;Name=HMPREF2948_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02345 KV814712.1 Protein Homology CDS 15913 16812 . + 0 ID=cds-OFQ20594.1;Parent=gene-HMPREF2948_02345;Dbxref=NCBI_GP:OFQ20594.1;Name=OFQ20594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631657.1;locus_tag=HMPREF2948_02345;product=LysR family transcriptional regulator;protein_id=OFQ20594.1;transl_table=11 KV814712.1 Genbank gene 16841 17668 . - . ID=gene-HMPREF2948_02350;Name=HMPREF2948_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02350 KV814712.1 Protein Homology CDS 16841 17668 . - 0 ID=cds-OFQ20595.1;Parent=gene-HMPREF2948_02350;Dbxref=NCBI_GP:OFQ20595.1;Name=OFQ20595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697548.1;locus_tag=HMPREF2948_02350;product=phosphatase;protein_id=OFQ20595.1;transl_table=11 KV814712.1 Genbank gene 17669 18688 . - . ID=gene-HMPREF2948_02355;Name=HMPREF2948_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02355 KV814712.1 Protein Homology CDS 17669 18688 . - 0 ID=cds-OFQ20596.1;Parent=gene-HMPREF2948_02355;Dbxref=NCBI_GP:OFQ20596.1;Name=OFQ20596.1;Note=catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693962.1;locus_tag=HMPREF2948_02355;product=dihydroorotate dehydrogenase;protein_id=OFQ20596.1;transl_table=11 KV814712.1 Genbank gene 18758 21367 . - . ID=gene-HMPREF2948_02360;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=HMPREF2948_02360 KV814712.1 Protein Homology CDS 18758 21367 . - 0 ID=cds-OFQ20597.1;Parent=gene-HMPREF2948_02360;Dbxref=NCBI_GP:OFQ20597.1;Name=OFQ20597.1;gbkey=CDS;gene=pepN;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011200210.1;locus_tag=HMPREF2948_02360;product=aminopeptidase N;protein_id=OFQ20597.1;transl_table=11 KV814712.1 Genbank gene 21529 22023 . + . ID=gene-HMPREF2948_02365;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=HMPREF2948_02365 KV814712.1 Protein Homology CDS 21529 22023 . + 0 ID=cds-OFQ20598.1;Parent=gene-HMPREF2948_02365;Dbxref=NCBI_GP:OFQ20598.1;Name=OFQ20598.1;Note=catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide;gbkey=CDS;gene=purE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693627.1;locus_tag=HMPREF2948_02365;product=N5-carboxyaminoimidazole ribonucleotide mutase;protein_id=OFQ20598.1;transl_table=11 KV814712.1 Genbank gene 22094 23182 . + . ID=gene-HMPREF2948_02370;Name=HMPREF2948_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02370 KV814712.1 Protein Homology CDS 22094 23182 . + 0 ID=cds-OFQ20599.1;Parent=gene-HMPREF2948_02370;Dbxref=NCBI_GP:OFQ20599.1;Name=OFQ20599.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527770.1;locus_tag=HMPREF2948_02370;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=OFQ20599.1;transl_table=11 KV814712.1 Genbank gene 23321 24511 . + . ID=gene-HMPREF2948_02375;Name=HMPREF2948_02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02375 KV814712.1 Protein Homology CDS 23321 24511 . + 0 ID=cds-OFQ20600.1;Parent=gene-HMPREF2948_02375;Dbxref=NCBI_GP:OFQ20600.1;Name=OFQ20600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499893.1;locus_tag=HMPREF2948_02375;product=aromatic amino acid aminotransferase;protein_id=OFQ20600.1;transl_table=11 KV814712.1 Genbank gene 24557 25009 . - . ID=gene-HMPREF2948_02380;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=HMPREF2948_02380 KV814712.1 Protein Homology CDS 24557 25009 . - 0 ID=cds-OFQ20601.1;Parent=gene-HMPREF2948_02380;Dbxref=NCBI_GP:OFQ20601.1;Name=OFQ20601.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaE;inference=EXISTENCE: similar to AA sequence:SwissProt:P45308.1;locus_tag=HMPREF2948_02380;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=OFQ20601.1;transl_table=11 KV814712.1 Genbank gene 25010 25255 . - . ID=gene-HMPREF2948_02385;Name=HMPREF2948_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02385 KV814712.1 Protein Homology CDS 25010 25255 . - 0 ID=cds-OFQ20602.1;Parent=gene-HMPREF2948_02385;Dbxref=NCBI_GP:OFQ20602.1;Name=OFQ20602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654167.1;locus_tag=HMPREF2948_02385;product=molybdopterin synthase sulfur carrier subunit;protein_id=OFQ20602.1;transl_table=11 KV814712.1 Genbank gene 25257 25739 . - . ID=gene-HMPREF2948_02390;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=HMPREF2948_02390 KV814712.1 Protein Homology CDS 25257 25739 . - 0 ID=cds-OFQ20603.1;Parent=gene-HMPREF2948_02390;Dbxref=NCBI_GP:OFQ20603.1;Name=OFQ20603.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005642378.1;locus_tag=HMPREF2948_02390;product=cyclic pyranopterin monophosphate synthase accessory protein;protein_id=OFQ20603.1;transl_table=11 KV814712.1 Genbank gene 25827 26840 . - . ID=gene-HMPREF2948_02395;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=HMPREF2948_02395 KV814712.1 Protein Homology CDS 25827 26840 . - 0 ID=cds-OFQ20623.1;Parent=gene-HMPREF2948_02395;Dbxref=NCBI_GP:OFQ20623.1;Name=OFQ20623.1;Note=together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z;gbkey=CDS;gene=moaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694398.1;locus_tag=HMPREF2948_02395;product=cyclic pyranopterin phosphate synthase MoaA;protein_id=OFQ20623.1;transl_table=11 KV814712.1 cmsearch binding_site 26829 26970 . - . ID=id-KV814712.1:26829..26970;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV814712.1 Genbank gene 27128 28072 . + . ID=gene-HMPREF2948_02400;Name=HMPREF2948_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02400 KV814712.1 Protein Homology CDS 27128 28072 . + 0 ID=cds-OFQ20604.1;Parent=gene-HMPREF2948_02400;Dbxref=NCBI_GP:OFQ20604.1;Name=OFQ20604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697488.1;locus_tag=HMPREF2948_02400;product=hypothetical protein;protein_id=OFQ20604.1;transl_table=11 KV814712.1 Genbank gene 28107 29558 . - . ID=gene-HMPREF2948_02405;Name=HMPREF2948_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02405 KV814712.1 Protein Homology CDS 28107 29558 . - 0 ID=cds-OFQ20605.1;Parent=gene-HMPREF2948_02405;Dbxref=NCBI_GP:OFQ20605.1;Name=OFQ20605.1;Note=catalyzes the conversion of uridine to 4-thiouridinine tRNA%3B also required for the synthesis of the thiazole moiety;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065414.1;locus_tag=HMPREF2948_02405;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=OFQ20605.1;transl_table=11 KV814712.1 Genbank gene 29726 29968 . + . ID=gene-HMPREF2948_02410;Name=HMPREF2948_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02410 KV814712.1 Protein Homology CDS 29726 29968 . + 0 ID=cds-OFQ20606.1;Parent=gene-HMPREF2948_02410;Dbxref=NCBI_GP:OFQ20606.1;Name=OFQ20606.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538894.1;locus_tag=HMPREF2948_02410;product=exodeoxyribonuclease VII small subunit;protein_id=OFQ20606.1;transl_table=11 KV814712.1 Genbank gene 29972 30865 . + . ID=gene-HMPREF2948_02415;Name=HMPREF2948_02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02415 KV814712.1 Protein Homology CDS 29972 30865 . + 0 ID=cds-OFQ20607.1;Parent=gene-HMPREF2948_02415;Dbxref=NCBI_GP:OFQ20607.1;Name=OFQ20607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697523.1;locus_tag=HMPREF2948_02415;product=geranyl transferase;protein_id=OFQ20607.1;transl_table=11 KV814712.1 Genbank gene 30935 32788 . + . ID=gene-HMPREF2948_02420;Name=HMPREF2948_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02420 KV814712.1 Protein Homology CDS 30935 32788 . + 0 ID=cds-OFQ20608.1;Parent=gene-HMPREF2948_02420;Dbxref=NCBI_GP:OFQ20608.1;Name=OFQ20608.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065416.1;locus_tag=HMPREF2948_02420;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=OFQ20608.1;transl_table=11 KV814712.1 Genbank gene 33033 33386 . - . ID=gene-HMPREF2948_02425;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=HMPREF2948_02425 KV814712.1 Protein Homology CDS 33033 33386 . - 0 ID=cds-OFQ20609.1;Parent=gene-HMPREF2948_02425;Dbxref=NCBI_GP:OFQ20609.1;Name=OFQ20609.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005596075.1;locus_tag=HMPREF2948_02425;product=50S ribosomal protein L20;protein_id=OFQ20609.1;transl_table=11 KV814712.1 Genbank gene 33453 33650 . - . ID=gene-HMPREF2948_02430;Name=HMPREF2948_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02430 KV814712.1 Protein Homology CDS 33453 33650 . - 0 ID=cds-OFQ20610.1;Parent=gene-HMPREF2948_02430;Dbxref=NCBI_GP:OFQ20610.1;Name=OFQ20610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=HMPREF2948_02430;product=50S ribosomal protein L35;protein_id=OFQ20610.1;transl_table=11 KV814712.1 Genbank gene 33848 34312 . - . ID=gene-HMPREF2948_02435;Name=HMPREF2948_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02435 KV814712.1 Protein Homology CDS 33848 34312 . - 0 ID=cds-OFQ20611.1;Parent=gene-HMPREF2948_02435;Dbxref=NCBI_GP:OFQ20611.1;Name=OFQ20611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005575269.1;locus_tag=HMPREF2948_02435;product=translation initiation factor IF-3;protein_id=OFQ20611.1;transl_table=11 KV814712.1 Genbank gene 34536 35354 . - . ID=gene-HMPREF2948_02440;Name=HMPREF2948_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02440 KV814712.1 Protein Homology CDS 34536 35354 . - 0 ID=cds-OFQ20612.1;Parent=gene-HMPREF2948_02440;Dbxref=NCBI_GP:OFQ20612.1;Name=OFQ20612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697500.1;locus_tag=HMPREF2948_02440;product=D-hexose-6-phosphate mutarotase;protein_id=OFQ20612.1;transl_table=11 KV814712.1 Genbank gene 35469 37412 . - . ID=gene-HMPREF2948_02445;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=HMPREF2948_02445 KV814712.1 Protein Homology CDS 35469 37412 . - 0 ID=cds-OFQ20613.1;Parent=gene-HMPREF2948_02445;Dbxref=NCBI_GP:OFQ20613.1;Name=OFQ20613.1;Note=catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr);gbkey=CDS;gene=thrS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65TQ0.1;locus_tag=HMPREF2948_02445;product=threonine--tRNA ligase;protein_id=OFQ20613.1;transl_table=11 KV814712.1 Genbank gene 37673 38254 . + . ID=gene-HMPREF2948_02450;Name=HMPREF2948_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02450 KV814712.1 Protein Homology CDS 37673 38254 . + 0 ID=cds-OFQ20614.1;Parent=gene-HMPREF2948_02450;Dbxref=NCBI_GP:OFQ20614.1;Name=OFQ20614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065419.1;locus_tag=HMPREF2948_02450;product=FMN-dependent NADH-azoreductase;protein_id=OFQ20614.1;transl_table=11 KV814712.1 Genbank gene 38452 40002 . + . ID=gene-HMPREF2948_02455;Name=HMPREF2948_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02455 KV814712.1 Protein Homology CDS 38452 40002 . + 0 ID=cds-OFQ20615.1;Parent=gene-HMPREF2948_02455;Dbxref=NCBI_GP:OFQ20615.1;Name=OFQ20615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638564.1;locus_tag=HMPREF2948_02455;product=anthranilate synthase subunit I;protein_id=OFQ20615.1;transl_table=11 KV814712.1 Genbank gene 40015 40599 . + . ID=gene-HMPREF2948_02460;Name=HMPREF2948_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02460 KV814712.1 Protein Homology CDS 40015 40599 . + 0 ID=cds-OFQ20616.1;Parent=gene-HMPREF2948_02460;Dbxref=NCBI_GP:OFQ20616.1;Name=OFQ20616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697516.1;locus_tag=HMPREF2948_02460;product=glutamine amidotransferase;protein_id=OFQ20616.1;transl_table=11 KV814712.1 Genbank gene 40609 40995 . + . ID=gene-HMPREF2948_02465;Name=HMPREF2948_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02465 KV814712.1 Protein Homology CDS 40609 40995 . + 0 ID=cds-OFQ20617.1;Parent=gene-HMPREF2948_02465;Dbxref=NCBI_GP:OFQ20617.1;Name=OFQ20617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666933.1;locus_tag=HMPREF2948_02465;product=hypothetical protein;protein_id=OFQ20617.1;transl_table=11 KV814712.1 Genbank gene 41007 42008 . + . ID=gene-HMPREF2948_02470;Name=HMPREF2948_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02470 KV814712.1 Protein Homology CDS 41007 42008 . + 0 ID=cds-OFQ20618.1;Parent=gene-HMPREF2948_02470;Dbxref=NCBI_GP:OFQ20618.1;Name=OFQ20618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693973.1;locus_tag=HMPREF2948_02470;product=anthranilate phosphoribosyltransferase;protein_id=OFQ20618.1;transl_table=11 KV814712.1 Genbank gene 42066 43502 . + . ID=gene-HMPREF2948_02475;Name=HMPREF2948_02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02475 KV814712.1 Protein Homology CDS 42066 43502 . + 0 ID=cds-OFQ20619.1;Parent=gene-HMPREF2948_02475;Dbxref=NCBI_GP:OFQ20619.1;Name=OFQ20619.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065423.1;locus_tag=HMPREF2948_02475;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=OFQ20619.1;transl_table=11 KV814712.1 Genbank gene 43526 44284 . + . ID=gene-HMPREF2948_02480;Name=HMPREF2948_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02480 KV814712.1 Protein Homology CDS 43526 44284 . + 0 ID=cds-OFQ20620.1;Parent=gene-HMPREF2948_02480;Dbxref=NCBI_GP:OFQ20620.1;Name=OFQ20620.1;Note=NADP(+)-dependent%3B catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde%2C catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696166.1;locus_tag=HMPREF2948_02480;product=NAD(P)-dependent oxidoreductase;protein_id=OFQ20620.1;transl_table=11 KV814712.1 Genbank gene 44297 45493 . + . ID=gene-HMPREF2948_02485;Name=HMPREF2948_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02485 KV814712.1 Protein Homology CDS 44297 45493 . + 0 ID=cds-OFQ20621.1;Parent=gene-HMPREF2948_02485;Dbxref=NCBI_GP:OFQ20621.1;Name=OFQ20621.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065425.1;locus_tag=HMPREF2948_02485;product=tryptophan synthase subunit beta;protein_id=OFQ20621.1;transl_table=11 KV814712.1 Genbank gene 45493 46299 . + . ID=gene-HMPREF2948_02490;Name=HMPREF2948_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02490 KV814712.1 Protein Homology CDS 45493 46299 . + 0 ID=cds-OFQ20622.1;Parent=gene-HMPREF2948_02490;Dbxref=NCBI_GP:OFQ20622.1;Name=OFQ20622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243131.1;locus_tag=HMPREF2948_02490;product=tryptophan synthase subunit alpha;protein_id=OFQ20622.1;transl_table=11 ##sequence-region KV814713.1 1 31806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814713.1 Genbank region 1 31806 . + . ID=KV814713.1:1..31806;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814713.1 Genbank gene 72 1334 . - . ID=gene-HMPREF2948_02495;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=HMPREF2948_02495 KV814713.1 Protein Homology CDS 72 1334 . - 0 ID=cds-OFQ20468.1;Parent=gene-HMPREF2948_02495;Dbxref=NCBI_GP:OFQ20468.1;Name=OFQ20468.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064140.1;locus_tag=HMPREF2948_02495;product=transcription termination factor Rho;protein_id=OFQ20468.1;transl_table=11 KV814713.1 Genbank gene 1565 2938 . + . ID=gene-HMPREF2948_02500;Name=HMPREF2948_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02500 KV814713.1 Protein Homology CDS 1565 2938 . + 0 ID=cds-OFQ20442.1;Parent=gene-HMPREF2948_02500;Dbxref=NCBI_GP:OFQ20442.1;Name=OFQ20442.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652406.1;locus_tag=HMPREF2948_02500;product=argininosuccinate lyase;protein_id=OFQ20442.1;transl_table=11 KV814713.1 Genbank gene 3013 3504 . - . ID=gene-HMPREF2948_02505;Name=HMPREF2948_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02505 KV814713.1 Protein Homology CDS 3013 3504 . - 0 ID=cds-OFQ20443.1;Parent=gene-HMPREF2948_02505;Dbxref=NCBI_GP:OFQ20443.1;Name=OFQ20443.1;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651674.1;locus_tag=HMPREF2948_02505;product=YajQ family cyclic di-GMP-binding protein;protein_id=OFQ20443.1;transl_table=11 KV814713.1 Genbank gene 3525 4469 . - . ID=gene-HMPREF2948_02510;Name=HMPREF2948_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02510 KV814713.1 Protein Homology CDS 3525 4469 . - 0 ID=cds-OFQ20444.1;Parent=gene-HMPREF2948_02510;Dbxref=NCBI_GP:OFQ20444.1;Name=OFQ20444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500172.1;locus_tag=HMPREF2948_02510;product=phosphoserine phosphatase;protein_id=OFQ20444.1;transl_table=11 KV814713.1 Genbank gene 4525 5214 . + . ID=gene-HMPREF2948_02515;Name=HMPREF2948_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02515 KV814713.1 Protein Homology CDS 4525 5214 . + 0 ID=cds-OFQ20445.1;Parent=gene-HMPREF2948_02515;Dbxref=NCBI_GP:OFQ20445.1;Name=OFQ20445.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005573117.1;locus_tag=HMPREF2948_02515;product=hemolysin regulation protein AhpA;protein_id=OFQ20445.1;transl_table=11 KV814713.1 Genbank gene 5300 7297 . + . ID=gene-HMPREF2948_02520;Name=HMPREF2948_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02520 KV814713.1 Protein Homology CDS 5300 7297 . + 0 ID=cds-OFQ20446.1;Parent=gene-HMPREF2948_02520;Dbxref=NCBI_GP:OFQ20446.1;Name=OFQ20446.1;Note=catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991152.1;locus_tag=HMPREF2948_02520;product=transketolase;protein_id=OFQ20446.1;transl_table=11 KV814713.1 Genbank gene 7361 7843 . + . ID=gene-HMPREF2948_02525;Name=HMPREF2948_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02525 KV814713.1 Protein Homology CDS 7361 7843 . + 0 ID=cds-OFQ20447.1;Parent=gene-HMPREF2948_02525;Dbxref=NCBI_GP:OFQ20447.1;Name=OFQ20447.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651551.1;locus_tag=HMPREF2948_02525;product=MFS transporter;protein_id=OFQ20447.1;transl_table=11 KV814713.1 cmsearch binding_site 8112 8233 . + . ID=id-KV814713.1:8112..8233;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV814713.1 Genbank gene 8322 9692 . + . ID=gene-HMPREF2948_02530;Name=HMPREF2948_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02530 KV814713.1 Protein Homology CDS 8322 9692 . + 0 ID=cds-OFQ20448.1;Parent=gene-HMPREF2948_02530;Dbxref=NCBI_GP:OFQ20448.1;Name=OFQ20448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064134.1;locus_tag=HMPREF2948_02530;product=sodium:alanine symporter;protein_id=OFQ20448.1;transl_table=11 KV814713.1 Genbank gene 9934 10257 . + . ID=gene-HMPREF2948_02535;Name=HMPREF2948_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02535 KV814713.1 Protein Homology CDS 9934 10257 . + 0 ID=cds-OFQ20449.1;Parent=gene-HMPREF2948_02535;Dbxref=NCBI_GP:OFQ20449.1;Name=OFQ20449.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719151.1;locus_tag=HMPREF2948_02535;product=ribosome-associated inhibitor A;protein_id=OFQ20449.1;transl_table=11 KV814713.1 Genbank gene 10503 11897 . - . ID=gene-HMPREF2948_02540;Name=HMPREF2948_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02540 KV814713.1 Protein Homology CDS 10503 11897 . - 0 ID=cds-OFQ20450.1;Parent=gene-HMPREF2948_02540;Dbxref=NCBI_GP:OFQ20450.1;Name=OFQ20450.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697863.1;locus_tag=HMPREF2948_02540;product=lytic transglycosylase F;protein_id=OFQ20450.1;transl_table=11 KV814713.1 Genbank gene 11993 13843 . - . ID=gene-HMPREF2948_02545;Name=HMPREF2948_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02545 KV814713.1 Protein Homology CDS 11993 13843 . - 0 ID=cds-OFQ20451.1;Parent=gene-HMPREF2948_02545;Dbxref=NCBI_GP:OFQ20451.1;Name=OFQ20451.1;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064128.1;locus_tag=HMPREF2948_02545;product=DEAD/DEAH box helicase;protein_id=OFQ20451.1;transl_table=11 KV814713.1 Genbank gene 13919 14860 . - . ID=gene-HMPREF2948_02550;Name=HMPREF2948_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02550 KV814713.1 Protein Homology CDS 13919 14860 . - 0 ID=cds-OFQ20469.1;Parent=gene-HMPREF2948_02550;Dbxref=NCBI_GP:OFQ20469.1;Name=OFQ20469.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638902.1;locus_tag=HMPREF2948_02550;product=lipoprotein NlpI-like protein;protein_id=OFQ20469.1;transl_table=11 KV814713.1 Genbank gene 14925 17063 . - . ID=gene-HMPREF2948_02555;Name=HMPREF2948_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02555 KV814713.1 Protein Homology CDS 14925 17063 . - 0 ID=cds-OFQ20452.1;Parent=gene-HMPREF2948_02555;Dbxref=NCBI_GP:OFQ20452.1;Name=OFQ20452.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634398.1;locus_tag=HMPREF2948_02555;product=polyribonucleotide nucleotidyltransferase;protein_id=OFQ20452.1;transl_table=11 KV814713.1 Genbank gene 17305 17772 . + . ID=gene-HMPREF2948_02560;Name=HMPREF2948_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02560 KV814713.1 Protein Homology CDS 17305 17772 . + 0 ID=cds-OFQ20453.1;Parent=gene-HMPREF2948_02560;Dbxref=NCBI_GP:OFQ20453.1;Name=OFQ20453.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660595.1;locus_tag=HMPREF2948_02560;product=hypothetical protein;protein_id=OFQ20453.1;transl_table=11 KV814713.1 Genbank gene 17840 18061 . - . ID=gene-HMPREF2948_02565;Name=HMPREF2948_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02565 KV814713.1 Protein Homology CDS 17840 18061 . - 0 ID=cds-OFQ20454.1;Parent=gene-HMPREF2948_02565;Dbxref=NCBI_GP:OFQ20454.1;Name=OFQ20454.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019469551.1;locus_tag=HMPREF2948_02565;product=oxidoreductase;protein_id=OFQ20454.1;transl_table=11 KV814713.1 Genbank gene 18071 19114 . - . ID=gene-HMPREF2948_02570;Name=HMPREF2948_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02570 KV814713.1 Protein Homology CDS 18071 19114 . - 0 ID=cds-OFQ20455.1;Parent=gene-HMPREF2948_02570;Dbxref=NCBI_GP:OFQ20455.1;Name=OFQ20455.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638909.1;locus_tag=HMPREF2948_02570;product=sulfur transporter;protein_id=OFQ20455.1;transl_table=11 KV814713.1 Genbank gene 19281 20657 . - . ID=gene-HMPREF2948_02575;Name=HMPREF2948_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02575 KV814713.1 Protein Homology CDS 19281 20657 . - 0 ID=cds-OFQ20456.1;Parent=gene-HMPREF2948_02575;Dbxref=NCBI_GP:OFQ20456.1;Name=OFQ20456.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009874749.1;locus_tag=HMPREF2948_02575;product=thiosulfate sulfurtransferase;protein_id=OFQ20456.1;transl_table=11 KV814713.1 Genbank gene 20672 21658 . - . ID=gene-HMPREF2948_02580;Name=HMPREF2948_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02580 KV814713.1 Protein Homology CDS 20672 21658 . - 0 ID=cds-OFQ20457.1;Parent=gene-HMPREF2948_02580;Dbxref=NCBI_GP:OFQ20457.1;Name=OFQ20457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633289.1;locus_tag=HMPREF2948_02580;product=ABC transporter permease;protein_id=OFQ20457.1;transl_table=11 KV814713.1 Genbank gene 21786 23090 . - . ID=gene-HMPREF2948_02585;Name=HMPREF2948_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02585 KV814713.1 Protein Homology CDS 21786 23090 . - 0 ID=cds-OFQ20458.1;Parent=gene-HMPREF2948_02585;Dbxref=NCBI_GP:OFQ20458.1;Name=OFQ20458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635531.1;locus_tag=HMPREF2948_02585;product=hypothetical protein;protein_id=OFQ20458.1;transl_table=11 KV814713.1 Genbank gene 23109 23423 . - . ID=gene-HMPREF2948_02590;Name=HMPREF2948_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02590 KV814713.1 Protein Homology CDS 23109 23423 . - 0 ID=cds-OFQ20459.1;Parent=gene-HMPREF2948_02590;Dbxref=NCBI_GP:OFQ20459.1;Name=OFQ20459.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064122.1;locus_tag=HMPREF2948_02590;product=cupin;protein_id=OFQ20459.1;transl_table=11 KV814713.1 Genbank gene 23435 26233 . - . ID=gene-HMPREF2948_02595;Name=HMPREF2948_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02595 KV814713.1 Protein Homology CDS 23435 26233 . - 0 ID=cds-OFQ20460.1;Parent=gene-HMPREF2948_02595;Dbxref=NCBI_GP:OFQ20460.1;Name=OFQ20460.1;Note=has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567071.1;locus_tag=HMPREF2948_02595;product=DNA polymerase I;protein_id=OFQ20460.1;transl_table=11 KV814713.1 Genbank gene 26394 26699 . + . ID=gene-HMPREF2948_02600;Name=HMPREF2948_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02600 KV814713.1 Protein Homology CDS 26394 26699 . + 0 ID=cds-OFQ20461.1;Parent=gene-HMPREF2948_02600;Dbxref=NCBI_GP:OFQ20461.1;Name=OFQ20461.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695425.1;locus_tag=HMPREF2948_02600;product=cell division protein ZapA;protein_id=OFQ20461.1;transl_table=11 KV814713.1 Genbank gene 26748 27488 . - . ID=gene-HMPREF2948_02605;Name=HMPREF2948_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02605 KV814713.1 Protein Homology CDS 26748 27488 . - 0 ID=cds-OFQ20462.1;Parent=gene-HMPREF2948_02605;Dbxref=NCBI_GP:OFQ20462.1;Name=OFQ20462.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005564462.1;locus_tag=HMPREF2948_02605;product=hypothetical protein;protein_id=OFQ20462.1;transl_table=11 KV814713.1 Genbank gene 27490 28479 . - . ID=gene-HMPREF2948_02610;Name=HMPREF2948_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02610 KV814713.1 Protein Homology CDS 27490 28479 . - 0 ID=cds-OFQ20463.1;Parent=gene-HMPREF2948_02610;Dbxref=NCBI_GP:OFQ20463.1;Name=OFQ20463.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44916.1;locus_tag=HMPREF2948_02610;product=octaprenyl diphosphate synthase;protein_id=OFQ20463.1;transl_table=11 KV814713.1 Genbank gene 28708 29019 . + . ID=gene-HMPREF2948_02615;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=HMPREF2948_02615 KV814713.1 Protein Homology CDS 28708 29019 . + 0 ID=cds-OFQ20464.1;Parent=gene-HMPREF2948_02615;Dbxref=NCBI_GP:OFQ20464.1;Name=OFQ20464.1;gbkey=CDS;gene=rplU;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N3T7.1;locus_tag=HMPREF2948_02615;product=50S ribosomal protein L21;protein_id=OFQ20464.1;transl_table=11 KV814713.1 Genbank gene 29040 29297 . + . ID=gene-HMPREF2948_02620;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=HMPREF2948_02620 KV814713.1 Protein Homology CDS 29040 29297 . + 0 ID=cds-OFQ20465.1;Parent=gene-HMPREF2948_02620;Dbxref=NCBI_GP:OFQ20465.1;Name=OFQ20465.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869080.1;locus_tag=HMPREF2948_02620;product=50S ribosomal protein L27;protein_id=OFQ20465.1;transl_table=11 KV814713.1 Genbank gene 29484 30401 . + . ID=gene-HMPREF2948_02625;Name=HMPREF2948_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02625 KV814713.1 Protein Homology CDS 29484 30401 . + 0 ID=cds-OFQ20466.1;Parent=gene-HMPREF2948_02625;Dbxref=NCBI_GP:OFQ20466.1;Name=OFQ20466.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005559146.1;locus_tag=HMPREF2948_02625;product=transporter;protein_id=OFQ20466.1;transl_table=11 KV814713.1 Genbank gene 30429 31607 . + . ID=gene-HMPREF2948_02630;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=HMPREF2948_02630 KV814713.1 Protein Homology CDS 30429 31607 . + 0 ID=cds-OFQ20467.1;Parent=gene-HMPREF2948_02630;Dbxref=NCBI_GP:OFQ20467.1;Name=OFQ20467.1;Note=ObgE%3B essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;inference=EXISTENCE: similar to AA sequence:SwissProt:P44915.1;locus_tag=HMPREF2948_02630;product=GTPase ObgE;protein_id=OFQ20467.1;transl_table=11 ##sequence-region KV814714.1 1 39127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814714.1 Genbank region 1 39127 . + . ID=KV814714.1:1..39127;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814714.1 Genbank gene 112 2034 . + . ID=gene-HMPREF2948_02635;Name=HMPREF2948_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02635 KV814714.1 Protein Homology CDS 112 2034 . + 0 ID=cds-OFQ20241.1;Parent=gene-HMPREF2948_02635;Dbxref=NCBI_GP:OFQ20241.1;Name=OFQ20241.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065455.1;locus_tag=HMPREF2948_02635;product=ATP-dependent helicase;protein_id=OFQ20241.1;transl_table=11 KV814714.1 Genbank gene 2037 2747 . + . ID=gene-HMPREF2948_02640;Name=HMPREF2948_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02640 KV814714.1 Protein Homology CDS 2037 2747 . + 0 ID=cds-OFQ20242.1;Parent=gene-HMPREF2948_02640;Dbxref=NCBI_GP:OFQ20242.1;Name=OFQ20242.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693782.1;locus_tag=HMPREF2948_02640;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;protein_id=OFQ20242.1;transl_table=11 KV814714.1 Genbank gene 2768 3310 . + . ID=gene-HMPREF2948_02645;Name=HMPREF2948_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02645 KV814714.1 Protein Homology CDS 2768 3310 . + 0 ID=cds-OFQ20243.1;Parent=gene-HMPREF2948_02645;Dbxref=NCBI_GP:OFQ20243.1;Name=OFQ20243.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005556395.1;locus_tag=HMPREF2948_02645;product=hypothetical protein;protein_id=OFQ20243.1;transl_table=11 KV814714.1 Genbank gene 3357 5045 . + . ID=gene-HMPREF2948_02650;Name=HMPREF2948_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02650 KV814714.1 Protein Homology CDS 3357 5045 . + 0 ID=cds-OFQ20244.1;Parent=gene-HMPREF2948_02650;Dbxref=NCBI_GP:OFQ20244.1;Name=OFQ20244.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686836.1;locus_tag=HMPREF2948_02650;product=long-chain fatty acid--CoA ligase;protein_id=OFQ20244.1;transl_table=11 KV814714.1 Genbank gene 5115 6266 . + . ID=gene-HMPREF2948_02655;Name=HMPREF2948_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02655 KV814714.1 Protein Homology CDS 5115 6266 . + 0 ID=cds-OFQ20245.1;Parent=gene-HMPREF2948_02655;Dbxref=NCBI_GP:OFQ20245.1;Name=OFQ20245.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065451.1;locus_tag=HMPREF2948_02655;product=ribonuclease D;protein_id=OFQ20245.1;transl_table=11 KV814714.1 Genbank gene 6681 8444 . + . ID=gene-HMPREF2948_02660;Name=HMPREF2948_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02660 KV814714.1 GeneMarkS+ CDS 6681 8444 . + 0 ID=cds-OFQ20246.1;Parent=gene-HMPREF2948_02660;Dbxref=NCBI_GP:OFQ20246.1;Name=OFQ20246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_02660;product=hypothetical protein;protein_id=OFQ20246.1;transl_table=11 KV814714.1 Genbank gene 8504 9955 . + . ID=gene-HMPREF2948_02665;Name=HMPREF2948_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02665 KV814714.1 Protein Homology CDS 8504 9955 . + 0 ID=cds-OFQ20247.1;Parent=gene-HMPREF2948_02665;Dbxref=NCBI_GP:OFQ20247.1;Name=OFQ20247.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005645778.1;locus_tag=HMPREF2948_02665;product=hypothetical protein;protein_id=OFQ20247.1;transl_table=11 KV814714.1 Genbank gene 10059 11510 . - . ID=gene-HMPREF2948_02670;Name=HMPREF2948_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02670 KV814714.1 Protein Homology CDS 10059 11510 . - 0 ID=cds-OFQ20248.1;Parent=gene-HMPREF2948_02670;Dbxref=NCBI_GP:OFQ20248.1;Name=OFQ20248.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697525.1;locus_tag=HMPREF2948_02670;product=phosphate acetyltransferase;protein_id=OFQ20248.1;transl_table=11 KV814714.1 Genbank gene 11575 12780 . - . ID=gene-HMPREF2948_02675;Name=HMPREF2948_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02675 KV814714.1 Protein Homology CDS 11575 12780 . - 0 ID=cds-OFQ20249.1;Parent=gene-HMPREF2948_02675;Dbxref=NCBI_GP:OFQ20249.1;Name=OFQ20249.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA%3B also known to act on propionate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696205.1;locus_tag=HMPREF2948_02675;product=acetate kinase;protein_id=OFQ20249.1;transl_table=11 KV814714.1 Genbank gene 13002 13448 . + . ID=gene-HMPREF2948_02680;Name=HMPREF2948_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02680 KV814714.1 Protein Homology CDS 13002 13448 . + 0 ID=cds-OFQ20250.1;Parent=gene-HMPREF2948_02680;Dbxref=NCBI_GP:OFQ20250.1;Name=OFQ20250.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696204.1;locus_tag=HMPREF2948_02680;product=hypothetical protein;protein_id=OFQ20250.1;transl_table=11 KV814714.1 Genbank gene 13554 14045 . + . ID=gene-HMPREF2948_02685;Name=HMPREF2948_02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02685 KV814714.1 Protein Homology CDS 13554 14045 . + 0 ID=cds-OFQ20251.1;Parent=gene-HMPREF2948_02685;Dbxref=NCBI_GP:OFQ20251.1;Name=OFQ20251.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697526.1;locus_tag=HMPREF2948_02685;product=colicin V synthesis protein;protein_id=OFQ20251.1;transl_table=11 KV814714.1 Genbank gene 14060 15577 . + . ID=gene-HMPREF2948_02690;Name=HMPREF2948_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02690 KV814714.1 Protein Homology CDS 14060 15577 . + 0 ID=cds-OFQ20252.1;Parent=gene-HMPREF2948_02690;Dbxref=NCBI_GP:OFQ20252.1;Name=OFQ20252.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697544.1;locus_tag=HMPREF2948_02690;product=amidophosphoribosyltransferase;protein_id=OFQ20252.1;transl_table=11 KV814714.1 Genbank gene 15703 17142 . - . ID=gene-HMPREF2948_02695;Name=HMPREF2948_02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02695 KV814714.1 Protein Homology CDS 15703 17142 . - 0 ID=cds-OFQ20253.1;Parent=gene-HMPREF2948_02695;Dbxref=NCBI_GP:OFQ20253.1;Name=OFQ20253.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700623.1;locus_tag=HMPREF2948_02695;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=OFQ20253.1;transl_table=11 KV814714.1 Genbank gene 17295 17771 . + . ID=gene-HMPREF2948_02700;Name=HMPREF2948_02700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02700 KV814714.1 Protein Homology CDS 17295 17771 . + 0 ID=cds-OFQ20254.1;Parent=gene-HMPREF2948_02700;Dbxref=NCBI_GP:OFQ20254.1;Name=OFQ20254.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355744.1;locus_tag=HMPREF2948_02700;product=transcription elongation factor GreA;protein_id=OFQ20254.1;transl_table=11 KV814714.1 Genbank gene 17801 18100 . - . ID=gene-HMPREF2948_02705;Name=HMPREF2948_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02705 KV814714.1 Protein Homology CDS 17801 18100 . - 0 ID=cds-OFQ20255.1;Parent=gene-HMPREF2948_02705;Dbxref=NCBI_GP:OFQ20255.1;Name=OFQ20255.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650404.1;locus_tag=HMPREF2948_02705;product=RNA-binding protein;protein_id=OFQ20255.1;transl_table=11 KV814714.1 Genbank gene 18254 18886 . + . ID=gene-HMPREF2948_02710;Name=rrmJ;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=HMPREF2948_02710 KV814714.1 Protein Homology CDS 18254 18886 . + 0 ID=cds-OFQ20256.1;Parent=gene-HMPREF2948_02710;Dbxref=NCBI_GP:OFQ20256.1;Name=OFQ20256.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697532.1;locus_tag=HMPREF2948_02710;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase;protein_id=OFQ20256.1;transl_table=11 KV814714.1 Genbank gene 18983 20887 . + . ID=gene-HMPREF2948_02715;Name=hflB;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;locus_tag=HMPREF2948_02715 KV814714.1 Protein Homology CDS 18983 20887 . + 0 ID=cds-OFQ20257.1;Parent=gene-HMPREF2948_02715;Dbxref=NCBI_GP:OFQ20257.1;Name=OFQ20257.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011962130.1;locus_tag=HMPREF2948_02715;product=ATP-dependent metalloprotease;protein_id=OFQ20257.1;transl_table=11 KV814714.1 Genbank gene 21002 21829 . + . ID=gene-HMPREF2948_02720;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=HMPREF2948_02720 KV814714.1 Protein Homology CDS 21002 21829 . + 0 ID=cds-OFQ20258.1;Parent=gene-HMPREF2948_02720;Dbxref=NCBI_GP:OFQ20258.1;Name=OFQ20258.1;Note=catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate;gbkey=CDS;gene=folP;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702342.1;locus_tag=HMPREF2948_02720;product=dihydropteroate synthase;protein_id=OFQ20258.1;transl_table=11 KV814714.1 Genbank gene 21906 23240 . + . ID=gene-HMPREF2948_02725;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=HMPREF2948_02725 KV814714.1 Protein Homology CDS 21906 23240 . + 0 ID=cds-OFQ20259.1;Parent=gene-HMPREF2948_02725;Dbxref=NCBI_GP:OFQ20259.1;Name=OFQ20259.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CNJ0.1;locus_tag=HMPREF2948_02725;product=phosphoglucosamine mutase;protein_id=OFQ20259.1;transl_table=11 KV814714.1 Genbank gene 23310 23792 . + . ID=gene-HMPREF2948_02730;Name=HMPREF2948_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02730 KV814714.1 Protein Homology CDS 23310 23792 . + 0 ID=cds-OFQ20260.1;Parent=gene-HMPREF2948_02730;Dbxref=NCBI_GP:OFQ20260.1;Name=OFQ20260.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696192.1;locus_tag=HMPREF2948_02730;product=phosphohistidine phosphatase SixA;protein_id=OFQ20260.1;transl_table=11 KV814714.1 Genbank gene 24050 24541 . + . ID=gene-HMPREF2948_02735;Name=HMPREF2948_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02735 KV814714.1 Protein Homology CDS 24050 24541 . + 0 ID=cds-OFQ20261.1;Parent=gene-HMPREF2948_02735;Dbxref=NCBI_GP:OFQ20261.1;Name=OFQ20261.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525843.1;locus_tag=HMPREF2948_02735;product=histone;protein_id=OFQ20261.1;transl_table=11 KV814714.1 Genbank gene 24609 24875 . + . ID=gene-HMPREF2948_02740;Name=HMPREF2948_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02740 KV814714.1 Protein Homology CDS 24609 24875 . + 0 ID=cds-OFQ20262.1;Parent=gene-HMPREF2948_02740;Dbxref=NCBI_GP:OFQ20262.1;Name=OFQ20262.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688423.1;locus_tag=HMPREF2948_02740;product=hypothetical protein;protein_id=OFQ20262.1;transl_table=11 KV814714.1 Genbank gene 24977 25711 . + . ID=gene-HMPREF2948_02745;Name=HMPREF2948_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02745 KV814714.1 Protein Homology CDS 24977 25711 . + 0 ID=cds-OFQ20263.1;Parent=gene-HMPREF2948_02745;Dbxref=NCBI_GP:OFQ20263.1;Name=OFQ20263.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45209.1;locus_tag=HMPREF2948_02745;product=dethiobiotin synthase;protein_id=OFQ20263.1;transl_table=11 KV814714.1 Genbank gene 25765 26457 . - . ID=gene-HMPREF2948_02750;Name=HMPREF2948_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02750 KV814714.1 Protein Homology CDS 25765 26457 . - 0 ID=cds-OFQ20264.1;Parent=gene-HMPREF2948_02750;Dbxref=NCBI_GP:OFQ20264.1;Name=OFQ20264.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065436.1;locus_tag=HMPREF2948_02750;product=carbonate dehydratase;protein_id=OFQ20264.1;transl_table=11 KV814714.1 Genbank gene 26588 27991 . - . ID=gene-HMPREF2948_02755;Name=HMPREF2948_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02755 KV814714.1 Protein Homology CDS 26588 27991 . - 0 ID=cds-OFQ20265.1;Parent=gene-HMPREF2948_02755;Dbxref=NCBI_GP:OFQ20265.1;Name=OFQ20265.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869177.1;locus_tag=HMPREF2948_02755;product=asparagine--tRNA ligase;protein_id=OFQ20265.1;transl_table=11 KV814714.1 Genbank gene 28132 29193 . + . ID=gene-HMPREF2948_02760;Name=HMPREF2948_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02760 KV814714.1 Protein Homology CDS 28132 29193 . + 0 ID=cds-OFQ20266.1;Parent=gene-HMPREF2948_02760;Dbxref=NCBI_GP:OFQ20266.1;Name=OFQ20266.1;Note=multicopy suppressor of htrA(degP);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691843.1;locus_tag=HMPREF2948_02760;product=protease SohB;protein_id=OFQ20266.1;transl_table=11 KV814714.1 Genbank gene 29373 30227 . + . ID=gene-HMPREF2948_02765;Name=HMPREF2948_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02765 KV814714.1 Protein Homology CDS 29373 30227 . + 0 ID=cds-OFQ20267.1;Parent=gene-HMPREF2948_02765;Dbxref=NCBI_GP:OFQ20267.1;Name=OFQ20267.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005726415.1;locus_tag=HMPREF2948_02765;product=plastocyanin;protein_id=OFQ20267.1;transl_table=11 KV814714.1 Genbank gene 30294 31157 . - . ID=gene-HMPREF2948_02770;Name=HMPREF2948_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02770 KV814714.1 Protein Homology CDS 30294 31157 . - 0 ID=cds-OFQ20268.1;Parent=gene-HMPREF2948_02770;Dbxref=NCBI_GP:OFQ20268.1;Name=OFQ20268.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065432.1;locus_tag=HMPREF2948_02770;product=hypothetical protein;protein_id=OFQ20268.1;transl_table=11 KV814714.1 Genbank gene 31357 32346 . + . ID=gene-HMPREF2948_02775;Name=HMPREF2948_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02775 KV814714.1 Protein Homology CDS 31357 32346 . + 0 ID=cds-OFQ20269.1;Parent=gene-HMPREF2948_02775;Dbxref=NCBI_GP:OFQ20269.1;Name=OFQ20269.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A3MZX4.1;locus_tag=HMPREF2948_02775;product=phenylalanine--tRNA ligase subunit alpha;protein_id=OFQ20269.1;transl_table=11 KV814714.1 Genbank gene 32422 34812 . + . ID=gene-HMPREF2948_02780;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=HMPREF2948_02780 KV814714.1 Protein Homology CDS 32422 34812 . + 0 ID=cds-OFQ20270.1;Parent=gene-HMPREF2948_02780;Dbxref=NCBI_GP:OFQ20270.1;Name=OFQ20270.1;Note=catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily;gbkey=CDS;gene=pheT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759095.1;locus_tag=HMPREF2948_02780;product=phenylalanine--tRNA ligase subunit beta;protein_id=OFQ20270.1;transl_table=11 KV814714.1 Genbank gene 34826 35125 . + . ID=gene-HMPREF2948_02785;Name=HMPREF2948_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02785 KV814714.1 Protein Homology CDS 34826 35125 . + 0 ID=cds-OFQ20271.1;Parent=gene-HMPREF2948_02785;Dbxref=NCBI_GP:OFQ20271.1;Name=OFQ20271.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697518.1;locus_tag=HMPREF2948_02785;product=integration host factor subunit alpha;protein_id=OFQ20271.1;transl_table=11 KV814714.1 Genbank gene 35173 35658 . + . ID=gene-HMPREF2948_02790;Name=HMPREF2948_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02790 KV814714.1 Protein Homology CDS 35173 35658 . + 0 ID=cds-OFQ20272.1;Parent=gene-HMPREF2948_02790;Dbxref=NCBI_GP:OFQ20272.1;Name=OFQ20272.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696176.1;locus_tag=HMPREF2948_02790;product=endopeptidase;protein_id=OFQ20272.1;transl_table=11 KV814714.1 Genbank gene 35701 36591 . - . ID=gene-HMPREF2948_02795;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=HMPREF2948_02795 KV814714.1 Protein Homology CDS 35701 36591 . - 0 ID=cds-OFQ20273.1;Parent=gene-HMPREF2948_02795;Dbxref=NCBI_GP:OFQ20273.1;Name=OFQ20273.1;Note=MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor;gbkey=CDS;gene=metF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697527.1;locus_tag=HMPREF2948_02795;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=OFQ20273.1;transl_table=11 KV814714.1 Genbank gene 36921 37349 . + . ID=gene-HMPREF2948_02800;Name=HMPREF2948_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02800 KV814714.1 Protein Homology CDS 36921 37349 . + 0 ID=cds-OFQ20274.1;Parent=gene-HMPREF2948_02800;Dbxref=NCBI_GP:OFQ20274.1;Name=OFQ20274.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=HMPREF2948_02800;product=50S ribosomal protein L13;protein_id=OFQ20274.1;transl_table=11 KV814714.1 Genbank gene 37366 37758 . + . ID=gene-HMPREF2948_02805;Name=HMPREF2948_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02805 KV814714.1 Protein Homology CDS 37366 37758 . + 0 ID=cds-OFQ20275.1;Parent=gene-HMPREF2948_02805;Dbxref=NCBI_GP:OFQ20275.1;Name=OFQ20275.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q32BA9.1;locus_tag=HMPREF2948_02805;product=30S ribosomal protein S9;protein_id=OFQ20275.1;transl_table=11 KV814714.1 Genbank gene 37987 38625 . + . ID=gene-HMPREF2948_02810;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=HMPREF2948_02810 KV814714.1 Protein Homology CDS 37987 38625 . + 0 ID=cds-OFQ20276.1;Parent=gene-HMPREF2948_02810;Dbxref=NCBI_GP:OFQ20276.1;Name=OFQ20276.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CNB0.1;locus_tag=HMPREF2948_02810;product=stringent starvation protein A;protein_id=OFQ20276.1;transl_table=11 KV814714.1 Genbank gene 38625 39071 . + . ID=gene-HMPREF2948_02815;Name=HMPREF2948_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02815 KV814714.1 Protein Homology CDS 38625 39071 . + 0 ID=cds-OFQ20277.1;Parent=gene-HMPREF2948_02815;Dbxref=NCBI_GP:OFQ20277.1;Name=OFQ20277.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650453.1;locus_tag=HMPREF2948_02815;product=stringent starvation protein B;protein_id=OFQ20277.1;transl_table=11 ##sequence-region KV814715.1 1 7509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814715.1 Genbank region 1 7509 . + . ID=KV814715.1:1..7509;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814715.1 Genbank gene 124 218 . - . ID=gene-HMPREF2948_02820;Name=HMPREF2948_02820;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_02820 KV814715.1 tRNAscan-SE tRNA 124 218 . - . ID=rna-HMPREF2948_02820;Parent=gene-HMPREF2948_02820;anticodon=(pos:complement(182..184));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_02820;product=tRNA-Sec KV814715.1 tRNAscan-SE exon 124 218 . - . ID=exon-HMPREF2948_02820-1;Parent=rna-HMPREF2948_02820;anticodon=(pos:complement(182..184));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_02820;product=tRNA-Sec KV814715.1 Genbank gene 291 1673 . + . ID=gene-HMPREF2948_02825;Name=HMPREF2948_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02825 KV814715.1 Protein Homology CDS 291 1673 . + 0 ID=cds-OFQ20160.1;Parent=gene-HMPREF2948_02825;Dbxref=NCBI_GP:OFQ20160.1;Name=OFQ20160.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632236.1;locus_tag=HMPREF2948_02825;product=L-selenocysteinyl-tRNA(Sec) synthase;protein_id=OFQ20160.1;transl_table=11 KV814715.1 Genbank gene 1670 3529 . + . ID=gene-HMPREF2948_02830;Name=HMPREF2948_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02830 KV814715.1 Protein Homology CDS 1670 3529 . + 0 ID=cds-OFQ20161.1;Parent=gene-HMPREF2948_02830;Dbxref=NCBI_GP:OFQ20161.1;Name=OFQ20161.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005543542.1;locus_tag=HMPREF2948_02830;product=selenocysteine-specific translation elongation factor;protein_id=OFQ20161.1;transl_table=11 KV814715.1 Genbank gene 3537 4439 . + . ID=gene-HMPREF2948_02835;Name=HMPREF2948_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02835 KV814715.1 Protein Homology CDS 3537 4439 . + 0 ID=cds-OFQ20162.1;Parent=gene-HMPREF2948_02835;Dbxref=NCBI_GP:OFQ20162.1;Name=OFQ20162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697459.1;locus_tag=HMPREF2948_02835;product=hypothetical protein;protein_id=OFQ20162.1;transl_table=11 KV814715.1 Genbank gene 4468 4707 . - . ID=gene-HMPREF2948_02840;Name=HMPREF2948_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02840 KV814715.1 Protein Homology CDS 4468 4707 . - 0 ID=cds-OFQ20163.1;Parent=gene-HMPREF2948_02840;Dbxref=NCBI_GP:OFQ20163.1;Name=OFQ20163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648599.1;locus_tag=HMPREF2948_02840;product=sulfurtransferase TusA;protein_id=OFQ20163.1;transl_table=11 KV814715.1 Genbank gene 4824 5435 . + . ID=gene-HMPREF2948_02845;Name=HMPREF2948_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02845 KV814715.1 Protein Homology CDS 4824 5435 . + 0 ID=cds-OFQ20164.1;Parent=gene-HMPREF2948_02845;Dbxref=NCBI_GP:OFQ20164.1;Name=OFQ20164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697463.1;locus_tag=HMPREF2948_02845;product=IMPACT family protein;protein_id=OFQ20164.1;transl_table=11 KV814715.1 Genbank gene 5446 6909 . + . ID=gene-HMPREF2948_02850;Name=HMPREF2948_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02850 KV814715.1 Protein Homology CDS 5446 6909 . + 0 ID=cds-OFQ20165.1;Parent=gene-HMPREF2948_02850;Dbxref=NCBI_GP:OFQ20165.1;Name=OFQ20165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636108.1;locus_tag=HMPREF2948_02850;product=potassium transporter;protein_id=OFQ20165.1;transl_table=11 KV814715.1 Genbank gene 6909 7415 . + . ID=gene-HMPREF2948_02855;Name=HMPREF2948_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02855 KV814715.1 Protein Homology CDS 6909 7415 . + 0 ID=cds-OFQ20166.1;Parent=gene-HMPREF2948_02855;Dbxref=NCBI_GP:OFQ20166.1;Name=OFQ20166.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694808.1;locus_tag=HMPREF2948_02855;product=protoporphyrinogen oxidase;protein_id=OFQ20166.1;transl_table=11 ##sequence-region KV814716.1 1 347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814716.1 Genbank region 1 347 . + . ID=KV814716.1:1..347;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814716.1 Genbank gene 1 185 . - . ID=gene-HMPREF2948_02860;Name=HMPREF2948_02860;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_02860;partial=true;start_range=.,1 KV814716.1 Genbank rRNA 1 185 . - . ID=rna-HMPREF2948_02860;Parent=gene-HMPREF2948_02860;gbkey=rRNA;locus_tag=HMPREF2948_02860;partial=true;product=16S ribosomal RNA;start_range=.,1 KV814716.1 Genbank exon 1 185 . - . ID=exon-HMPREF2948_02860-1;Parent=rna-HMPREF2948_02860;gbkey=rRNA;locus_tag=HMPREF2948_02860;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region KV814717.1 1 388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814717.1 Genbank region 1 388 . + . ID=KV814717.1:1..388;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814717.1 Genbank gene 65 141 . + . ID=gene-HMPREF2948_02865;Name=HMPREF2948_02865;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_02865 KV814717.1 tRNAscan-SE tRNA 65 141 . + . ID=rna-HMPREF2948_02865;Parent=gene-HMPREF2948_02865;anticodon=(pos:99..101);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_02865;product=tRNA-Ile KV814717.1 tRNAscan-SE exon 65 141 . + . ID=exon-HMPREF2948_02865-1;Parent=rna-HMPREF2948_02865;anticodon=(pos:99..101);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_02865;product=tRNA-Ile KV814717.1 Genbank gene 195 270 . + . ID=gene-HMPREF2948_02870;Name=HMPREF2948_02870;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_02870 KV814717.1 tRNAscan-SE tRNA 195 270 . + . ID=rna-HMPREF2948_02870;Parent=gene-HMPREF2948_02870;anticodon=(pos:228..230);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_02870;product=tRNA-Ala KV814717.1 tRNAscan-SE exon 195 270 . + . ID=exon-HMPREF2948_02870-1;Parent=rna-HMPREF2948_02870;anticodon=(pos:228..230);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_02870;product=tRNA-Ala ##sequence-region KV814718.1 1 70982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814718.1 Genbank region 1 70982 . + . ID=KV814718.1:1..70982;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814718.1 Genbank gene 98 715 . + . ID=gene-HMPREF2948_02875;Name=HMPREF2948_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02875 KV814718.1 Protein Homology CDS 98 715 . + 0 ID=cds-OFQ19656.1;Parent=gene-HMPREF2948_02875;Dbxref=NCBI_GP:OFQ19656.1;Name=OFQ19656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700209.1;locus_tag=HMPREF2948_02875;product=hypothetical protein;protein_id=OFQ19656.1;transl_table=11 KV814718.1 Genbank gene 1141 3177 . + . ID=gene-HMPREF2948_02880;Name=HMPREF2948_02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02880 KV814718.1 Protein Homology CDS 1141 3177 . + 0 ID=cds-OFQ19648.1;Parent=gene-HMPREF2948_02880;Dbxref=NCBI_GP:OFQ19648.1;Name=OFQ19648.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065511.1;locus_tag=HMPREF2948_02880;product=excinuclease ABC subunit B;protein_id=OFQ19648.1;transl_table=11 KV814718.1 Genbank gene 3215 4606 . - . ID=gene-HMPREF2948_02885;Name=HMPREF2948_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02885 KV814718.1 Protein Homology CDS 3215 4606 . - 0 ID=cds-OFQ19649.1;Parent=gene-HMPREF2948_02885;Dbxref=NCBI_GP:OFQ19649.1;Name=OFQ19649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666745.1;locus_tag=HMPREF2948_02885;product=serine peptidase;protein_id=OFQ19649.1;transl_table=11 KV814718.1 Genbank gene 4661 4846 . + . ID=gene-HMPREF2948_02890;Name=HMPREF2948_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02890 KV814718.1 Protein Homology CDS 4661 4846 . + 0 ID=cds-OFQ19650.1;Parent=gene-HMPREF2948_02890;Dbxref=NCBI_GP:OFQ19650.1;Name=OFQ19650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696280.1;locus_tag=HMPREF2948_02890;product=hypothetical protein;protein_id=OFQ19650.1;transl_table=11 KV814718.1 Genbank gene 5021 6112 . + . ID=gene-HMPREF2948_02895;Name=HMPREF2948_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02895 KV814718.1 Protein Homology CDS 5021 6112 . + 0 ID=cds-OFQ19651.1;Parent=gene-HMPREF2948_02895;Dbxref=NCBI_GP:OFQ19651.1;Name=OFQ19651.1;Note=catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065508.1;locus_tag=HMPREF2948_02895;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=OFQ19651.1;transl_table=11 KV814718.1 Genbank gene 6243 7151 . + . ID=gene-HMPREF2948_02900;Name=HMPREF2948_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02900 KV814718.1 Protein Homology CDS 6243 7151 . + 0 ID=cds-OFQ19657.1;Parent=gene-HMPREF2948_02900;Dbxref=NCBI_GP:OFQ19657.1;Name=OFQ19657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011609059.1;locus_tag=HMPREF2948_02900;product=hypothetical protein;protein_id=OFQ19657.1;transl_table=11 KV814718.1 Genbank gene 7229 9496 . - . ID=gene-HMPREF2948_02905;Name=HMPREF2948_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02905 KV814718.1 Protein Homology CDS 7229 9496 . - 0 ID=cds-OFQ19652.1;Parent=gene-HMPREF2948_02905;Dbxref=NCBI_GP:OFQ19652.1;Name=OFQ19652.1;Note=carbamoyltransferase%3B involved in the formation of the cyanate group of hydrogenase%3B catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065506.1;locus_tag=HMPREF2948_02905;product=carbamoyltransferase HypF;protein_id=OFQ19652.1;transl_table=11 KV814718.1 Genbank gene 9510 9785 . - . ID=gene-HMPREF2948_02910;Name=HMPREF2948_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02910 KV814718.1 Protein Homology CDS 9510 9785 . - 0 ID=cds-OFQ19653.1;Parent=gene-HMPREF2948_02910;Dbxref=NCBI_GP:OFQ19653.1;Name=OFQ19653.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243596.1;locus_tag=HMPREF2948_02910;product=hydrogenase;protein_id=OFQ19653.1;transl_table=11 KV814718.1 Genbank pseudogene 10273 10512 . + . ID=gene-HMPREF2948_02915;Name=HMPREF2948_02915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_02915;pseudo=true KV814718.1 Protein Homology CDS 10273 10512 . + 0 ID=cds-HMPREF2948_02915;Parent=gene-HMPREF2948_02915;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702163.1;locus_tag=HMPREF2948_02915;product=acylneuraminate cytidylyltransferase;pseudo=true;transl_table=11 KV814718.1 Genbank gene 10498 10731 . - . ID=gene-HMPREF2948_02920;Name=HMPREF2948_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02920 KV814718.1 GeneMarkS+ CDS 10498 10731 . - 0 ID=cds-OFQ19654.1;Parent=gene-HMPREF2948_02920;Dbxref=NCBI_GP:OFQ19654.1;Name=OFQ19654.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_02920;product=hypothetical protein;protein_id=OFQ19654.1;transl_table=11 KV814718.1 Genbank gene 10808 16103 . + . ID=gene-HMPREF2948_02925;Name=HMPREF2948_02925;end_range=16103,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02925;partial=true KV814718.1 GeneMarkS+ CDS 10808 16103 . + 0 ID=cds-OFQ19655.1;Parent=gene-HMPREF2948_02925;Dbxref=NCBI_GP:OFQ19655.1;Name=OFQ19655.1;end_range=16103,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_02925;partial=true;product=hypothetical protein;protein_id=OFQ19655.1;transl_table=11 KV814718.1 Genbank pseudogene 16204 17879 . + . ID=gene-HMPREF2948_02930;Name=HMPREF2948_02930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_02930;pseudo=true KV814718.1 Protein Homology CDS 16204 17879 . + 2 ID=cds-HMPREF2948_02930;Parent=gene-HMPREF2948_02930;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625658.1;locus_tag=HMPREF2948_02930;product=hypothetical protein;pseudo=true;transl_table=11 KV814718.1 Genbank gene 18338 18937 . + . ID=gene-HMPREF2948_02935;Name=HMPREF2948_02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02935 KV814718.1 Protein Homology CDS 18338 18937 . + 0 ID=cds-OFQ19584.1;Parent=gene-HMPREF2948_02935;Dbxref=NCBI_GP:OFQ19584.1;Name=OFQ19584.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065505.1;locus_tag=HMPREF2948_02935;product=electron transporter;protein_id=OFQ19584.1;transl_table=11 KV814718.1 Genbank gene 18974 20995 . + . ID=gene-HMPREF2948_02940;Name=HMPREF2948_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02940 KV814718.1 Protein Homology CDS 18974 20995 . + 0 ID=cds-OFQ19585.1;Parent=gene-HMPREF2948_02940;Dbxref=NCBI_GP:OFQ19585.1;Name=OFQ19585.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005556286.1;locus_tag=HMPREF2948_02940;product=hydrogenase 4 subunit B;protein_id=OFQ19585.1;transl_table=11 KV814718.1 Genbank gene 21005 21967 . + . ID=gene-HMPREF2948_02945;Name=hycD;gbkey=Gene;gene=hycD;gene_biotype=protein_coding;locus_tag=HMPREF2948_02945 KV814718.1 Protein Homology CDS 21005 21967 . + 0 ID=cds-OFQ19586.1;Parent=gene-HMPREF2948_02945;Dbxref=NCBI_GP:OFQ19586.1;Name=OFQ19586.1;Note=formate hydrogenlyase subunit 4%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065503.1;locus_tag=HMPREF2948_02945;product=hydrogenase 3 membrane subunit;protein_id=OFQ19586.1;transl_table=11 KV814718.1 Genbank gene 21977 23422 . + . ID=gene-HMPREF2948_02950;Name=HMPREF2948_02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02950 KV814718.1 Protein Homology CDS 21977 23422 . + 0 ID=cds-OFQ19587.1;Parent=gene-HMPREF2948_02950;Dbxref=NCBI_GP:OFQ19587.1;Name=OFQ19587.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499957.1;locus_tag=HMPREF2948_02950;product=hydrogenase 4 subunit D;protein_id=OFQ19587.1;transl_table=11 KV814718.1 Genbank gene 23433 24071 . + . ID=gene-HMPREF2948_02955;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=HMPREF2948_02955 KV814718.1 Protein Homology CDS 23433 24071 . + 0 ID=cds-OFQ19588.1;Parent=gene-HMPREF2948_02955;Dbxref=NCBI_GP:OFQ19588.1;Name=OFQ19588.1;Note=interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hyfE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547333.1;locus_tag=HMPREF2948_02955;product=hydrogenase 4 membrane subunit;protein_id=OFQ19588.1;transl_table=11 KV814718.1 Genbank gene 24076 25614 . + . ID=gene-HMPREF2948_02960;Name=HMPREF2948_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02960 KV814718.1 Protein Homology CDS 24076 25614 . + 0 ID=cds-OFQ19589.1;Parent=gene-HMPREF2948_02960;Dbxref=NCBI_GP:OFQ19589.1;Name=OFQ19589.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005542190.1;locus_tag=HMPREF2948_02960;product=hydrogenase;protein_id=OFQ19589.1;transl_table=11 KV814718.1 Genbank gene 25634 27364 . + . ID=gene-HMPREF2948_02965;Name=hycE;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=HMPREF2948_02965 KV814718.1 Protein Homology CDS 25634 27364 . + 0 ID=cds-OFQ19590.1;Parent=gene-HMPREF2948_02965;Dbxref=NCBI_GP:OFQ19590.1;Name=OFQ19590.1;Note=formate hydrogenlyase subunit 5%3B HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hycE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697674.1;locus_tag=HMPREF2948_02965;product=hydrogenase 3 large subunit;protein_id=OFQ19590.1;transl_table=11 KV814718.1 Genbank gene 27377 28024 . + . ID=gene-HMPREF2948_02970;Name=HMPREF2948_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02970 KV814718.1 Protein Homology CDS 27377 28024 . + 0 ID=cds-OFQ19591.1;Parent=gene-HMPREF2948_02970;Dbxref=NCBI_GP:OFQ19591.1;Name=OFQ19591.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005542187.1;locus_tag=HMPREF2948_02970;product=hydrogenase;protein_id=OFQ19591.1;transl_table=11 KV814718.1 Genbank gene 28021 28797 . + . ID=gene-HMPREF2948_02975;Name=HMPREF2948_02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02975 KV814718.1 Protein Homology CDS 28021 28797 . + 0 ID=cds-OFQ19592.1;Parent=gene-HMPREF2948_02975;Dbxref=NCBI_GP:OFQ19592.1;Name=OFQ19592.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547344.1;locus_tag=HMPREF2948_02975;product=hydrogenase;protein_id=OFQ19592.1;transl_table=11 KV814718.1 Genbank gene 28842 29249 . + . ID=gene-HMPREF2948_02980;Name=HMPREF2948_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02980 KV814718.1 Protein Homology CDS 28842 29249 . + 0 ID=cds-OFQ19593.1;Parent=gene-HMPREF2948_02980;Dbxref=NCBI_GP:OFQ19593.1;Name=OFQ19593.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567265.1;locus_tag=HMPREF2948_02980;product=formate hydrogenlyase maturation protein HycH;protein_id=OFQ19593.1;transl_table=11 KV814718.1 Genbank gene 29275 29697 . + . ID=gene-HMPREF2948_02985;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=HMPREF2948_02985 KV814718.1 Protein Homology CDS 29275 29697 . + 0 ID=cds-OFQ19634.1;Parent=gene-HMPREF2948_02985;Dbxref=NCBI_GP:OFQ19634.1;Name=OFQ19634.1;Note=involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE;gbkey=CDS;gene=hycI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700900.1;locus_tag=HMPREF2948_02985;product=hydrogenase 3 maturation endopeptidase HyCI;protein_id=OFQ19634.1;transl_table=11 KV814718.1 Genbank gene 29876 30301 . + . ID=gene-HMPREF2948_02990;Name=HMPREF2948_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02990 KV814718.1 Protein Homology CDS 29876 30301 . + 0 ID=cds-OFQ19594.1;Parent=gene-HMPREF2948_02990;Dbxref=NCBI_GP:OFQ19594.1;Name=OFQ19594.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696262.1;locus_tag=HMPREF2948_02990;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=OFQ19594.1;transl_table=11 KV814718.1 Genbank gene 30350 32035 . + . ID=gene-HMPREF2948_02995;Name=HMPREF2948_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_02995 KV814718.1 Protein Homology CDS 30350 32035 . + 0 ID=cds-OFQ19595.1;Parent=gene-HMPREF2948_02995;Dbxref=NCBI_GP:OFQ19595.1;Name=OFQ19595.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567261.1;locus_tag=HMPREF2948_02995;product=formate dehydrogenase subunit alpha;protein_id=OFQ19595.1;transl_table=11 KV814718.1 Genbank gene 32251 32769 . - . ID=gene-HMPREF2948_03000;Name=HMPREF2948_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03000 KV814718.1 Protein Homology CDS 32251 32769 . - 0 ID=cds-OFQ19596.1;Parent=gene-HMPREF2948_03000;Dbxref=NCBI_GP:OFQ19596.1;Name=OFQ19596.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525139.1;locus_tag=HMPREF2948_03000;product=hypothetical protein;protein_id=OFQ19596.1;transl_table=11 KV814718.1 Genbank gene 32987 33628 . - . ID=gene-HMPREF2948_03005;Name=HMPREF2948_03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03005 KV814718.1 Protein Homology CDS 32987 33628 . - 0 ID=cds-OFQ19597.1;Parent=gene-HMPREF2948_03005;Dbxref=NCBI_GP:OFQ19597.1;Name=OFQ19597.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065493.1;locus_tag=HMPREF2948_03005;product=cobalt ABC transporter ATP-binding protein;protein_id=OFQ19597.1;transl_table=11 KV814718.1 Genbank gene 33628 34272 . - . ID=gene-HMPREF2948_03010;Name=HMPREF2948_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03010 KV814718.1 Protein Homology CDS 33628 34272 . - 0 ID=cds-OFQ19598.1;Parent=gene-HMPREF2948_03010;Dbxref=NCBI_GP:OFQ19598.1;Name=OFQ19598.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697659.1;locus_tag=HMPREF2948_03010;product=ABC transporter permease;protein_id=OFQ19598.1;transl_table=11 KV814718.1 Genbank gene 34269 34880 . - . ID=gene-HMPREF2948_03015;Name=HMPREF2948_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03015 KV814718.1 Protein Homology CDS 34269 34880 . - 0 ID=cds-OFQ19599.1;Parent=gene-HMPREF2948_03015;Dbxref=NCBI_GP:OFQ19599.1;Name=OFQ19599.1;Note=catalyzes the ATP-dependent transport of cobalt;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525986.1;locus_tag=HMPREF2948_03015;product=cobalamin biosynthesis protein CbiM;protein_id=OFQ19599.1;transl_table=11 KV814718.1 Genbank gene 34882 35385 . - . ID=gene-HMPREF2948_03020;Name=HMPREF2948_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03020 KV814718.1 Protein Homology CDS 34882 35385 . - 0 ID=cds-OFQ19600.1;Parent=gene-HMPREF2948_03020;Dbxref=NCBI_GP:OFQ19600.1;Name=OFQ19600.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697614.1;locus_tag=HMPREF2948_03020;product=hypothetical protein;protein_id=OFQ19600.1;transl_table=11 KV814718.1 Genbank gene 35385 36068 . - . ID=gene-HMPREF2948_03025;Name=HMPREF2948_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03025 KV814718.1 Protein Homology CDS 35385 36068 . - 0 ID=cds-OFQ19601.1;Parent=gene-HMPREF2948_03025;Dbxref=NCBI_GP:OFQ19601.1;Name=OFQ19601.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697667.1;locus_tag=HMPREF2948_03025;product=hypothetical protein;protein_id=OFQ19601.1;transl_table=11 KV814718.1 Genbank gene 36155 36568 . + . ID=gene-HMPREF2948_03030;Name=HMPREF2948_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03030 KV814718.1 Protein Homology CDS 36155 36568 . + 0 ID=cds-OFQ19602.1;Parent=gene-HMPREF2948_03030;Dbxref=NCBI_GP:OFQ19602.1;Name=OFQ19602.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633867.1;locus_tag=HMPREF2948_03030;product=MerR family transcriptional regulator;protein_id=OFQ19602.1;transl_table=11 KV814718.1 Genbank gene 36701 37042 . + . ID=gene-HMPREF2948_03035;Name=HMPREF2948_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03035 KV814718.1 Protein Homology CDS 36701 37042 . + 0 ID=cds-OFQ19603.1;Parent=gene-HMPREF2948_03035;Dbxref=NCBI_GP:OFQ19603.1;Name=OFQ19603.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012885379.1;locus_tag=HMPREF2948_03035;product=hydrogenase nickel incorporation protein HybF;protein_id=OFQ19603.1;transl_table=11 KV814718.1 Genbank gene 37229 38035 . + . ID=gene-HMPREF2948_03040;Name=HMPREF2948_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03040 KV814718.1 Protein Homology CDS 37229 38035 . + 0 ID=cds-OFQ19604.1;Parent=gene-HMPREF2948_03040;Dbxref=NCBI_GP:OFQ19604.1;Name=OFQ19604.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011092824.1;locus_tag=HMPREF2948_03040;product=hypothetical protein;protein_id=OFQ19604.1;transl_table=11 KV814718.1 Genbank gene 38045 39157 . + . ID=gene-HMPREF2948_03045;Name=HMPREF2948_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03045 KV814718.1 Protein Homology CDS 38045 39157 . + 0 ID=cds-OFQ19605.1;Parent=gene-HMPREF2948_03045;Dbxref=NCBI_GP:OFQ19605.1;Name=OFQ19605.1;Note=necessary for the synthesis of all three hydrogenase isoenzymes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019843981.1;locus_tag=HMPREF2948_03045;product=hydrogenase formation protein HypD;protein_id=OFQ19605.1;transl_table=11 KV814718.1 Genbank gene 39162 40175 . + . ID=gene-HMPREF2948_03050;Name=HMPREF2948_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03050 KV814718.1 Protein Homology CDS 39162 40175 . + 0 ID=cds-OFQ19606.1;Parent=gene-HMPREF2948_03050;Dbxref=NCBI_GP:OFQ19606.1;Name=OFQ19606.1;Note=hydrogenase isoenzymes formation protein%3B involved in the formation of the cyanate group of the large subunit of the hydrogenase%3B catalyzes the formation of thiocyanate from thiocarbamate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718823.1;locus_tag=HMPREF2948_03050;product=hydrogenase expression/formation protein HypE;protein_id=OFQ19606.1;transl_table=11 KV814718.1 Genbank gene 40244 40567 . - . ID=gene-HMPREF2948_03055;Name=HMPREF2948_03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03055 KV814718.1 Protein Homology CDS 40244 40567 . - 0 ID=cds-OFQ19607.1;Parent=gene-HMPREF2948_03055;Dbxref=NCBI_GP:OFQ19607.1;Name=OFQ19607.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628170.1;locus_tag=HMPREF2948_03055;product=hypothetical protein;protein_id=OFQ19607.1;transl_table=11 KV814718.1 Genbank gene 40681 43320 . - . ID=gene-HMPREF2948_03060;Name=HMPREF2948_03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03060 KV814718.1 Protein Homology CDS 40681 43320 . - 0 ID=cds-OFQ19608.1;Parent=gene-HMPREF2948_03060;Dbxref=NCBI_GP:OFQ19608.1;Name=OFQ19608.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43920.1;locus_tag=HMPREF2948_03060;product=phosphoenolpyruvate carboxylase;protein_id=OFQ19608.1;transl_table=11 KV814718.1 Genbank gene 43493 44503 . - . ID=gene-HMPREF2948_03065;Name=HMPREF2948_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03065 KV814718.1 Protein Homology CDS 43493 44503 . - 0 ID=cds-OFQ19609.1;Parent=gene-HMPREF2948_03065;Dbxref=NCBI_GP:OFQ19609.1;Name=OFQ19609.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696247.1;locus_tag=HMPREF2948_03065;product=transcriptional regulator;protein_id=OFQ19609.1;transl_table=11 KV814718.1 Genbank gene 44908 45678 . + . ID=gene-HMPREF2948_03070;Name=HMPREF2948_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03070 KV814718.1 Protein Homology CDS 44908 45678 . + 0 ID=cds-OFQ19610.1;Parent=gene-HMPREF2948_03070;Dbxref=NCBI_GP:OFQ19610.1;Name=OFQ19610.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697637.1;locus_tag=HMPREF2948_03070;product=Lsg locus protein 4;protein_id=OFQ19610.1;transl_table=11 KV814718.1 Genbank gene 45686 46885 . + . ID=gene-HMPREF2948_03075;Name=HMPREF2948_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03075 KV814718.1 Protein Homology CDS 45686 46885 . + 0 ID=cds-OFQ19611.1;Parent=gene-HMPREF2948_03075;Dbxref=NCBI_GP:OFQ19611.1;Name=OFQ19611.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006247881.1;locus_tag=HMPREF2948_03075;product=hypothetical protein;protein_id=OFQ19611.1;transl_table=11 KV814718.1 Genbank gene 46878 47759 . + . ID=gene-HMPREF2948_03080;Name=HMPREF2948_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03080 KV814718.1 Protein Homology CDS 46878 47759 . + 0 ID=cds-OFQ19612.1;Parent=gene-HMPREF2948_03080;Dbxref=NCBI_GP:OFQ19612.1;Name=OFQ19612.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578999.1;locus_tag=HMPREF2948_03080;product=glycosyltransferase;protein_id=OFQ19612.1;transl_table=11 KV814718.1 Genbank gene 47782 48585 . + . ID=gene-HMPREF2948_03085;Name=HMPREF2948_03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03085 KV814718.1 Protein Homology CDS 47782 48585 . + 0 ID=cds-OFQ19613.1;Parent=gene-HMPREF2948_03085;Dbxref=NCBI_GP:OFQ19613.1;Name=OFQ19613.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702482.1;locus_tag=HMPREF2948_03085;product=amylovoran biosynthesis protein AmsE;protein_id=OFQ19613.1;transl_table=11 KV814718.1 Genbank gene 48618 49730 . + . ID=gene-HMPREF2948_03090;Name=HMPREF2948_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03090 KV814718.1 Protein Homology CDS 48618 49730 . + 0 ID=cds-OFQ19614.1;Parent=gene-HMPREF2948_03090;Dbxref=NCBI_GP:OFQ19614.1;Name=OFQ19614.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635222.1;locus_tag=HMPREF2948_03090;product=lytic transglycosylase;protein_id=OFQ19614.1;transl_table=11 KV814718.1 Genbank gene 49811 50950 . + . ID=gene-HMPREF2948_03095;Name=HMPREF2948_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03095 KV814718.1 Protein Homology CDS 49811 50950 . + 0 ID=cds-OFQ19615.1;Parent=gene-HMPREF2948_03095;Dbxref=NCBI_GP:OFQ19615.1;Name=OFQ19615.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523282.1;locus_tag=HMPREF2948_03095;product=methylamine utilization protein MauG;protein_id=OFQ19615.1;transl_table=11 KV814718.1 Genbank gene 51052 52167 . + . ID=gene-HMPREF2948_03100;Name=HMPREF2948_03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03100 KV814718.1 Protein Homology CDS 51052 52167 . + 0 ID=cds-OFQ19616.1;Parent=gene-HMPREF2948_03100;Dbxref=NCBI_GP:OFQ19616.1;Name=OFQ19616.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697609.1;locus_tag=HMPREF2948_03100;product=iron ABC transporter substrate-binding protein;protein_id=OFQ19616.1;transl_table=11 KV814718.1 Genbank gene 52183 53232 . + . ID=gene-HMPREF2948_03105;Name=HMPREF2948_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03105 KV814718.1 Protein Homology CDS 52183 53232 . + 0 ID=cds-OFQ19617.1;Parent=gene-HMPREF2948_03105;Dbxref=NCBI_GP:OFQ19617.1;Name=OFQ19617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697612.1;locus_tag=HMPREF2948_03105;product=iron ABC transporter permease;protein_id=OFQ19617.1;transl_table=11 KV814718.1 Genbank gene 53232 54005 . + . ID=gene-HMPREF2948_03110;Name=HMPREF2948_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03110 KV814718.1 Protein Homology CDS 53232 54005 . + 0 ID=cds-OFQ19618.1;Parent=gene-HMPREF2948_03110;Dbxref=NCBI_GP:OFQ19618.1;Name=OFQ19618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697603.1;locus_tag=HMPREF2948_03110;product=peptide ABC transporter substrate-binding protein;protein_id=OFQ19618.1;transl_table=11 KV814718.1 Genbank gene 54018 54452 . + . ID=gene-HMPREF2948_03115;Name=HMPREF2948_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03115 KV814718.1 Protein Homology CDS 54018 54452 . + 0 ID=cds-OFQ19619.1;Parent=gene-HMPREF2948_03115;Dbxref=NCBI_GP:OFQ19619.1;Name=OFQ19619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014992352.1;locus_tag=HMPREF2948_03115;product=pseudoazurin;protein_id=OFQ19619.1;transl_table=11 KV814718.1 Genbank gene 54523 55344 . + . ID=gene-HMPREF2948_03120;Name=HMPREF2948_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03120 KV814718.1 Protein Homology CDS 54523 55344 . + 0 ID=cds-OFQ19635.1;Parent=gene-HMPREF2948_03120;Dbxref=NCBI_GP:OFQ19635.1;Name=OFQ19635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697611.1;locus_tag=HMPREF2948_03120;product=glutathione synthetase;protein_id=OFQ19635.1;transl_table=11 KV814718.1 Genbank gene 55401 56015 . - . ID=gene-HMPREF2948_03125;Name=HMPREF2948_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03125 KV814718.1 Protein Homology CDS 55401 56015 . - 0 ID=cds-OFQ19620.1;Parent=gene-HMPREF2948_03125;Dbxref=NCBI_GP:OFQ19620.1;Name=OFQ19620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005556870.1;locus_tag=HMPREF2948_03125;product=lipoprotein HlpB;protein_id=OFQ19620.1;transl_table=11 KV814718.1 Genbank gene 56117 56440 . - . ID=gene-HMPREF2948_03130;Name=HMPREF2948_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03130 KV814718.1 Protein Homology CDS 56117 56440 . - 0 ID=cds-OFQ19621.1;Parent=gene-HMPREF2948_03130;Dbxref=NCBI_GP:OFQ19621.1;Name=OFQ19621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065468.1;locus_tag=HMPREF2948_03130;product=cytochrome C biogenesis protein CcsB;protein_id=OFQ19621.1;transl_table=11 KV814718.1 Genbank gene 56446 56925 . - . ID=gene-HMPREF2948_03135;Name=HMPREF2948_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03135 KV814718.1 Protein Homology CDS 56446 56925 . - 0 ID=cds-OFQ19622.1;Parent=gene-HMPREF2948_03135;Dbxref=NCBI_GP:OFQ19622.1;Name=OFQ19622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696229.1;locus_tag=HMPREF2948_03135;product=thioredoxin;protein_id=OFQ19622.1;transl_table=11 KV814718.1 Genbank gene 56915 57586 . - . ID=gene-HMPREF2948_03140;Name=HMPREF2948_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03140 KV814718.1 Protein Homology CDS 56915 57586 . - 0 ID=cds-OFQ19623.1;Parent=gene-HMPREF2948_03140;Dbxref=NCBI_GP:OFQ19623.1;Name=OFQ19623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065466.1;locus_tag=HMPREF2948_03140;product=ABC transporter ATP-binding protein;protein_id=OFQ19623.1;transl_table=11 KV814718.1 Genbank gene 57588 58721 . - . ID=gene-HMPREF2948_03145;Name=HMPREF2948_03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03145 KV814718.1 Protein Homology CDS 57588 58721 . - 0 ID=cds-OFQ19624.1;Parent=gene-HMPREF2948_03145;Dbxref=NCBI_GP:OFQ19624.1;Name=OFQ19624.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016504300.1;locus_tag=HMPREF2948_03145;product=hypothetical protein;protein_id=OFQ19624.1;transl_table=11 KV814718.1 Genbank gene 58708 60048 . - . ID=gene-HMPREF2948_03150;Name=HMPREF2948_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03150 KV814718.1 Protein Homology CDS 58708 60048 . - 0 ID=cds-OFQ19625.1;Parent=gene-HMPREF2948_03150;Dbxref=NCBI_GP:OFQ19625.1;Name=OFQ19625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547153.1;locus_tag=HMPREF2948_03150;product=ABC transporter permease;protein_id=OFQ19625.1;transl_table=11 KV814718.1 Genbank gene 60048 61442 . - . ID=gene-HMPREF2948_03155;Name=HMPREF2948_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03155 KV814718.1 Protein Homology CDS 60048 61442 . - 0 ID=cds-OFQ19626.1;Parent=gene-HMPREF2948_03155;Dbxref=NCBI_GP:OFQ19626.1;Name=OFQ19626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697605.1;locus_tag=HMPREF2948_03155;product=hypothetical protein;protein_id=OFQ19626.1;transl_table=11 KV814718.1 Genbank gene 61558 62079 . - . ID=gene-HMPREF2948_03160;Name=HMPREF2948_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03160 KV814718.1 Protein Homology CDS 61558 62079 . - 0 ID=cds-OFQ19627.1;Parent=gene-HMPREF2948_03160;Dbxref=NCBI_GP:OFQ19627.1;Name=OFQ19627.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499926.1;locus_tag=HMPREF2948_03160;product=iron transporter;protein_id=OFQ19627.1;transl_table=11 KV814718.1 Genbank gene 62108 64012 . - . ID=gene-HMPREF2948_03165;Name=HMPREF2948_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03165 KV814718.1 Protein Homology CDS 62108 64012 . - 0 ID=cds-OFQ19628.1;Parent=gene-HMPREF2948_03165;Dbxref=NCBI_GP:OFQ19628.1;Name=OFQ19628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697622.1;locus_tag=HMPREF2948_03165;product=iron permease;protein_id=OFQ19628.1;transl_table=11 KV814718.1 Genbank gene 64224 66623 . - . ID=gene-HMPREF2948_03170;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=HMPREF2948_03170 KV814718.1 Protein Homology CDS 64224 66623 . - 0 ID=cds-OFQ19629.1;Parent=gene-HMPREF2948_03170;Dbxref=NCBI_GP:OFQ19629.1;Name=OFQ19629.1;Note=penicillin-binding protein 1b%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell;gbkey=CDS;gene=mrcB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697588.1;locus_tag=HMPREF2948_03170;product=penicillin-binding protein 1B;protein_id=OFQ19629.1;transl_table=11 KV814718.1 Genbank gene 66648 67001 . - . ID=gene-HMPREF2948_03175;Name=HMPREF2948_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03175 KV814718.1 Protein Homology CDS 66648 67001 . - 0 ID=cds-OFQ19630.1;Parent=gene-HMPREF2948_03175;Dbxref=NCBI_GP:OFQ19630.1;Name=OFQ19630.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44297.2;locus_tag=HMPREF2948_03175;product=hypothetical protein;protein_id=OFQ19630.1;transl_table=11 KV814718.1 Genbank gene 67003 67350 . - . ID=gene-HMPREF2948_03180;Name=HMPREF2948_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03180 KV814718.1 Protein Homology CDS 67003 67350 . - 0 ID=cds-OFQ19631.1;Parent=gene-HMPREF2948_03180;Dbxref=NCBI_GP:OFQ19631.1;Name=OFQ19631.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500973.1;locus_tag=HMPREF2948_03180;product=iron-sulfur cluster insertion protein ErpA;protein_id=OFQ19631.1;transl_table=11 KV814718.1 Genbank gene 67476 68279 . + . ID=gene-HMPREF2948_03185;Name=HMPREF2948_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03185 KV814718.1 Protein Homology CDS 67476 68279 . + 0 ID=cds-OFQ19632.1;Parent=gene-HMPREF2948_03185;Dbxref=NCBI_GP:OFQ19632.1;Name=OFQ19632.1;Note=catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355756.1;locus_tag=HMPREF2948_03185;product=type I methionyl aminopeptidase;protein_id=OFQ19632.1;transl_table=11 KV814718.1 Genbank gene 68341 70926 . + . ID=gene-HMPREF2948_03190;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=HMPREF2948_03190 KV814718.1 Protein Homology CDS 68341 70926 . + 0 ID=cds-OFQ19633.1;Parent=gene-HMPREF2948_03190;Dbxref=NCBI_GP:OFQ19633.1;Name=OFQ19633.1;gbkey=CDS;gene=glnD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014668094.1;locus_tag=HMPREF2948_03190;product=bifunctional uridylyltransferase/uridylyl-removing protein;protein_id=OFQ19633.1;transl_table=11 ##sequence-region KV814719.1 1 187716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814719.1 Genbank region 1 187716 . + . ID=KV814719.1:1..187716;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814719.1 Genbank gene 137 212 . - . ID=gene-HMPREF2948_03195;Name=HMPREF2948_03195;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_03195 KV814719.1 tRNAscan-SE tRNA 137 212 . - . ID=rna-HMPREF2948_03195;Parent=gene-HMPREF2948_03195;anticodon=(pos:complement(177..179));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03195;product=tRNA-Thr KV814719.1 tRNAscan-SE exon 137 212 . - . ID=exon-HMPREF2948_03195-1;Parent=rna-HMPREF2948_03195;anticodon=(pos:complement(177..179));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03195;product=tRNA-Thr KV814719.1 Genbank gene 216 290 . - . ID=gene-HMPREF2948_03200;Name=HMPREF2948_03200;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_03200 KV814719.1 tRNAscan-SE tRNA 216 290 . - . ID=rna-HMPREF2948_03200;Parent=gene-HMPREF2948_03200;anticodon=(pos:complement(255..257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03200;product=tRNA-Gly KV814719.1 tRNAscan-SE exon 216 290 . - . ID=exon-HMPREF2948_03200-1;Parent=rna-HMPREF2948_03200;anticodon=(pos:complement(255..257));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03200;product=tRNA-Gly KV814719.1 Genbank gene 332 416 . - . ID=gene-HMPREF2948_03205;Name=HMPREF2948_03205;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_03205 KV814719.1 tRNAscan-SE tRNA 332 416 . - . ID=rna-HMPREF2948_03205;Parent=gene-HMPREF2948_03205;anticodon=(pos:complement(380..382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03205;product=tRNA-Tyr KV814719.1 tRNAscan-SE exon 332 416 . - . ID=exon-HMPREF2948_03205-1;Parent=rna-HMPREF2948_03205;anticodon=(pos:complement(380..382));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03205;product=tRNA-Tyr KV814719.1 Genbank gene 447 522 . - . ID=gene-HMPREF2948_03210;Name=HMPREF2948_03210;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_03210 KV814719.1 tRNAscan-SE tRNA 447 522 . - . ID=rna-HMPREF2948_03210;Parent=gene-HMPREF2948_03210;anticodon=(pos:complement(487..489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03210;product=tRNA-Thr KV814719.1 tRNAscan-SE exon 447 522 . - . ID=exon-HMPREF2948_03210-1;Parent=rna-HMPREF2948_03210;anticodon=(pos:complement(487..489));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_03210;product=tRNA-Thr KV814719.1 Genbank gene 737 1672 . + . ID=gene-HMPREF2948_03215;Name=HMPREF2948_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03215 KV814719.1 Protein Homology CDS 737 1672 . + 0 ID=cds-OFQ19297.1;Parent=gene-HMPREF2948_03215;Dbxref=NCBI_GP:OFQ19297.1;Name=OFQ19297.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064541.1;locus_tag=HMPREF2948_03215;product=type I pantothenate kinase;protein_id=OFQ19297.1;transl_table=11 KV814719.1 Genbank gene 1712 3370 . - . ID=gene-HMPREF2948_03220;Name=HMPREF2948_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03220 KV814719.1 Protein Homology CDS 1712 3370 . - 0 ID=cds-OFQ19298.1;Parent=gene-HMPREF2948_03220;Dbxref=NCBI_GP:OFQ19298.1;Name=OFQ19298.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667625.1;locus_tag=HMPREF2948_03220;product=ABC transporter ATP-binding protein;protein_id=OFQ19298.1;transl_table=11 KV814719.1 Genbank gene 3363 5108 . - . ID=gene-HMPREF2948_03225;Name=HMPREF2948_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03225 KV814719.1 Protein Homology CDS 3363 5108 . - 0 ID=cds-OFQ19299.1;Parent=gene-HMPREF2948_03225;Dbxref=NCBI_GP:OFQ19299.1;Name=OFQ19299.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694625.1;locus_tag=HMPREF2948_03225;product=ABC transporter ATP-binding protein;protein_id=OFQ19299.1;transl_table=11 KV814719.1 Genbank gene 5180 7504 . - . ID=gene-HMPREF2948_03230;Name=HMPREF2948_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03230 KV814719.1 Protein Homology CDS 5180 7504 . - 0 ID=cds-OFQ19300.1;Parent=gene-HMPREF2948_03230;Dbxref=NCBI_GP:OFQ19300.1;Name=OFQ19300.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005751557.1;locus_tag=HMPREF2948_03230;product=ligand-gated channel protein;protein_id=OFQ19300.1;transl_table=11 KV814719.1 Genbank gene 7669 10095 . - . ID=gene-HMPREF2948_03235;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=HMPREF2948_03235 KV814719.1 Protein Homology CDS 7669 10095 . - 0 ID=cds-OFQ19301.1;Parent=gene-HMPREF2948_03235;Dbxref=NCBI_GP:OFQ19301.1;Name=OFQ19301.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201400.1;locus_tag=HMPREF2948_03235;product=DNA gyrase subunit B;protein_id=OFQ19301.1;transl_table=11 KV814719.1 Genbank gene 10287 11639 . + . ID=gene-HMPREF2948_03240;Name=HMPREF2948_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03240 KV814719.1 Protein Homology CDS 10287 11639 . + 0 ID=cds-OFQ19302.1;Parent=gene-HMPREF2948_03240;Dbxref=NCBI_GP:OFQ19302.1;Name=OFQ19302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991888.1;locus_tag=HMPREF2948_03240;product=phosphoglycerate transporter;protein_id=OFQ19302.1;transl_table=11 KV814719.1 Genbank gene 12030 13178 . + . ID=gene-HMPREF2948_03245;Name=HMPREF2948_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03245 KV814719.1 Protein Homology CDS 12030 13178 . + 0 ID=cds-OFQ19303.1;Parent=gene-HMPREF2948_03245;Dbxref=NCBI_GP:OFQ19303.1;Name=OFQ19303.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695040.1;locus_tag=HMPREF2948_03245;product=hydrogenase 2 small subunit;protein_id=OFQ19303.1;transl_table=11 KV814719.1 Genbank gene 13181 14221 . + . ID=gene-HMPREF2948_03250;Name=HMPREF2948_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03250 KV814719.1 Protein Homology CDS 13181 14221 . + 0 ID=cds-OFQ19304.1;Parent=gene-HMPREF2948_03250;Dbxref=NCBI_GP:OFQ19304.1;Name=OFQ19304.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005556988.1;locus_tag=HMPREF2948_03250;product=hydrogenase 2 protein HybA;protein_id=OFQ19304.1;transl_table=11 KV814719.1 Genbank gene 14214 15440 . + . ID=gene-HMPREF2948_03255;Name=HMPREF2948_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03255 KV814719.1 Protein Homology CDS 14214 15440 . + 0 ID=cds-OFQ19305.1;Parent=gene-HMPREF2948_03255;Dbxref=NCBI_GP:OFQ19305.1;Name=OFQ19305.1;Note=HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695037.1;locus_tag=HMPREF2948_03255;product=hydrogenase 2 b cytochrome subunit;protein_id=OFQ19305.1;transl_table=11 KV814719.1 Genbank gene 15440 17149 . + . ID=gene-HMPREF2948_03260;Name=HMPREF2948_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03260 KV814719.1 Protein Homology CDS 15440 17149 . + 0 ID=cds-OFQ19306.1;Parent=gene-HMPREF2948_03260;Dbxref=NCBI_GP:OFQ19306.1;Name=OFQ19306.1;Note=involved in hydrogen uptake;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201506.1;locus_tag=HMPREF2948_03260;product=hydrogenase 2 large subunit;protein_id=OFQ19306.1;transl_table=11 KV814719.1 Genbank gene 17149 17628 . + . ID=gene-HMPREF2948_03265;Name=hybD;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=HMPREF2948_03265 KV814719.1 Protein Homology CDS 17149 17628 . + 0 ID=cds-OFQ19307.1;Parent=gene-HMPREF2948_03265;Dbxref=NCBI_GP:OFQ19307.1;Name=OFQ19307.1;Note=protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC);gbkey=CDS;gene=hybD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064531.1;locus_tag=HMPREF2948_03265;product=hydrogenase 2 maturation endopeptidase;protein_id=OFQ19307.1;transl_table=11 KV814719.1 Genbank gene 17698 18207 . + . ID=gene-HMPREF2948_03270;Name=HMPREF2948_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03270 KV814719.1 Protein Homology CDS 17698 18207 . + 0 ID=cds-OFQ19308.1;Parent=gene-HMPREF2948_03270;Dbxref=NCBI_GP:OFQ19308.1;Name=OFQ19308.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638552.1;locus_tag=HMPREF2948_03270;product=hydrogenase;protein_id=OFQ19308.1;transl_table=11 KV814719.1 Genbank gene 18318 19550 . - . ID=gene-HMPREF2948_03275;Name=HMPREF2948_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03275 KV814719.1 Protein Homology CDS 18318 19550 . - 0 ID=cds-OFQ19309.1;Parent=gene-HMPREF2948_03275;Dbxref=NCBI_GP:OFQ19309.1;Name=OFQ19309.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43885.1;locus_tag=HMPREF2948_03275;product=D-3-phosphoglycerate dehydrogenase;protein_id=OFQ19309.1;transl_table=11 KV814719.1 Genbank gene 19570 20229 . - . ID=gene-HMPREF2948_03280;Name=HMPREF2948_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03280 KV814719.1 Protein Homology CDS 19570 20229 . - 0 ID=cds-OFQ19310.1;Parent=gene-HMPREF2948_03280;Dbxref=NCBI_GP:OFQ19310.1;Name=OFQ19310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652327.1;locus_tag=HMPREF2948_03280;product=ribose-5-phosphate isomerase;protein_id=OFQ19310.1;transl_table=11 KV814719.1 Genbank gene 20339 21487 . - . ID=gene-HMPREF2948_03285;Name=HMPREF2948_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03285 KV814719.1 Protein Homology CDS 20339 21487 . - 0 ID=cds-OFQ19311.1;Parent=gene-HMPREF2948_03285;Dbxref=NCBI_GP:OFQ19311.1;Name=OFQ19311.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688712.1;locus_tag=HMPREF2948_03285;product=YggW family oxidoreductase;protein_id=OFQ19311.1;transl_table=11 KV814719.1 Genbank gene 21537 23954 . - . ID=gene-HMPREF2948_03290;Name=HMPREF2948_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03290 KV814719.1 Protein Homology CDS 21537 23954 . - 0 ID=cds-OFQ19312.1;Parent=gene-HMPREF2948_03290;Dbxref=NCBI_GP:OFQ19312.1;Name=OFQ19312.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533992.1;locus_tag=HMPREF2948_03290;product=endopeptidase La;protein_id=OFQ19312.1;transl_table=11 KV814719.1 Genbank gene 24189 25079 . + . ID=gene-HMPREF2948_03295;Name=HMPREF2948_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03295 KV814719.1 Protein Homology CDS 24189 25079 . + 0 ID=cds-OFQ19313.1;Parent=gene-HMPREF2948_03295;Dbxref=NCBI_GP:OFQ19313.1;Name=OFQ19313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695029.1;locus_tag=HMPREF2948_03295;product=hypothetical protein;protein_id=OFQ19313.1;transl_table=11 KV814719.1 Genbank gene 25133 25699 . - . ID=gene-HMPREF2948_03300;Name=HMPREF2948_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03300 KV814719.1 Protein Homology CDS 25133 25699 . - 0 ID=cds-OFQ19314.1;Parent=gene-HMPREF2948_03300;Dbxref=NCBI_GP:OFQ19314.1;Name=OFQ19314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697966.1;locus_tag=HMPREF2948_03300;product=TetR family transcriptional regulator;protein_id=OFQ19314.1;transl_table=11 KV814719.1 Genbank gene 25870 27933 . + . ID=gene-HMPREF2948_03305;Name=HMPREF2948_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03305 KV814719.1 Protein Homology CDS 25870 27933 . + 0 ID=cds-OFQ19315.1;Parent=gene-HMPREF2948_03305;Dbxref=NCBI_GP:OFQ19315.1;Name=OFQ19315.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006717222.1;locus_tag=HMPREF2948_03305;product=vibriobactin receptor;protein_id=OFQ19315.1;transl_table=11 KV814719.1 Genbank gene 27937 29661 . + . ID=gene-HMPREF2948_03310;Name=HMPREF2948_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03310 KV814719.1 Protein Homology CDS 27937 29661 . + 0 ID=cds-OFQ19316.1;Parent=gene-HMPREF2948_03310;Dbxref=NCBI_GP:OFQ19316.1;Name=OFQ19316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006717224.1;locus_tag=HMPREF2948_03310;product=ABC transporter permease;protein_id=OFQ19316.1;transl_table=11 KV814719.1 Genbank gene 29670 31442 . + . ID=gene-HMPREF2948_03315;Name=HMPREF2948_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03315 KV814719.1 Protein Homology CDS 29670 31442 . + 0 ID=cds-OFQ19317.1;Parent=gene-HMPREF2948_03315;Dbxref=NCBI_GP:OFQ19317.1;Name=OFQ19317.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064521.1;locus_tag=HMPREF2948_03315;product=ABC transporter permease;protein_id=OFQ19317.1;transl_table=11 KV814719.1 Genbank gene 31399 32631 . + . ID=gene-HMPREF2948_03320;Name=HMPREF2948_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03320 KV814719.1 Protein Homology CDS 31399 32631 . + 0 ID=cds-OFQ19318.1;Parent=gene-HMPREF2948_03320;Dbxref=NCBI_GP:OFQ19318.1;Name=OFQ19318.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697956.1;locus_tag=HMPREF2948_03320;product=MFS transporter;protein_id=OFQ19318.1;transl_table=11 KV814719.1 Genbank gene 32843 34366 . + . ID=gene-HMPREF2948_03325;Name=HMPREF2948_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03325 KV814719.1 Protein Homology CDS 32843 34366 . + 0 ID=cds-OFQ19319.1;Parent=gene-HMPREF2948_03325;Dbxref=NCBI_GP:OFQ19319.1;Name=OFQ19319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064515.1;locus_tag=HMPREF2948_03325;product=hypothetical protein;protein_id=OFQ19319.1;transl_table=11 KV814719.1 Genbank gene 34414 35049 . - . ID=gene-HMPREF2948_03330;Name=HMPREF2948_03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03330 KV814719.1 Protein Homology CDS 34414 35049 . - 0 ID=cds-OFQ19320.1;Parent=gene-HMPREF2948_03330;Dbxref=NCBI_GP:OFQ19320.1;Name=OFQ19320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005600150.1;locus_tag=HMPREF2948_03330;product=hypothetical protein;protein_id=OFQ19320.1;transl_table=11 KV814719.1 Genbank gene 35174 36475 . - . ID=gene-HMPREF2948_03335;Name=HMPREF2948_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03335 KV814719.1 Protein Homology CDS 35174 36475 . - 0 ID=cds-OFQ19321.1;Parent=gene-HMPREF2948_03335;Dbxref=NCBI_GP:OFQ19321.1;Name=OFQ19321.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_008807221.1;locus_tag=HMPREF2948_03335;product=C4-dicarboxylate ABC transporter;protein_id=OFQ19321.1;transl_table=11 KV814719.1 Genbank gene 36631 37680 . - . ID=gene-HMPREF2948_03340;Name=HMPREF2948_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03340 KV814719.1 Protein Homology CDS 36631 37680 . - 0 ID=cds-OFQ19322.1;Parent=gene-HMPREF2948_03340;Dbxref=NCBI_GP:OFQ19322.1;Name=OFQ19322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651213.1;locus_tag=HMPREF2948_03340;product=L-asparaginase;protein_id=OFQ19322.1;transl_table=11 KV814719.1 Genbank gene 37930 38376 . + . ID=gene-HMPREF2948_03345;Name=HMPREF2948_03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03345 KV814719.1 Protein Homology CDS 37930 38376 . + 0 ID=cds-OFQ19323.1;Parent=gene-HMPREF2948_03345;Dbxref=NCBI_GP:OFQ19323.1;Name=OFQ19323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011608309.1;locus_tag=HMPREF2948_03345;product=rhodanese-like domain-containing protein;protein_id=OFQ19323.1;transl_table=11 KV814719.1 Genbank gene 38386 38895 . + . ID=gene-HMPREF2948_03350;Name=HMPREF2948_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03350 KV814719.1 Protein Homology CDS 38386 38895 . + 0 ID=cds-OFQ19324.1;Parent=gene-HMPREF2948_03350;Dbxref=NCBI_GP:OFQ19324.1;Name=OFQ19324.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630575.1;locus_tag=HMPREF2948_03350;product=preprotein translocase subunit SecB;protein_id=OFQ19324.1;transl_table=11 KV814719.1 Genbank gene 38947 39954 . + . ID=gene-HMPREF2948_03355;Name=HMPREF2948_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03355 KV814719.1 Protein Homology CDS 38947 39954 . + 0 ID=cds-OFQ19325.1;Parent=gene-HMPREF2948_03355;Dbxref=NCBI_GP:OFQ19325.1;Name=OFQ19325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694541.1;locus_tag=HMPREF2948_03355;product=glycerol-3-phosphate dehydrogenase;protein_id=OFQ19325.1;transl_table=11 KV814719.1 Genbank gene 39964 40761 . + . ID=gene-HMPREF2948_03360;Name=HMPREF2948_03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03360 KV814719.1 Protein Homology CDS 39964 40761 . + 0 ID=cds-OFQ19326.1;Parent=gene-HMPREF2948_03360;Dbxref=NCBI_GP:OFQ19326.1;Name=OFQ19326.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550529.1;locus_tag=HMPREF2948_03360;product=serine O-acetyltransferase;protein_id=OFQ19326.1;transl_table=11 KV814719.1 Genbank gene 41657 42241 . + . ID=gene-HMPREF2948_03365;Name=HMPREF2948_03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03365 KV814719.1 GeneMarkS+ CDS 41657 42241 . + 0 ID=cds-OFQ19327.1;Parent=gene-HMPREF2948_03365;Dbxref=NCBI_GP:OFQ19327.1;Name=OFQ19327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_03365;product=hypothetical protein;protein_id=OFQ19327.1;transl_table=11 KV814719.1 Genbank gene 42324 43139 . + . ID=gene-HMPREF2948_03370;Name=HMPREF2948_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03370 KV814719.1 Protein Homology CDS 42324 43139 . + 0 ID=cds-OFQ19328.1;Parent=gene-HMPREF2948_03370;Dbxref=NCBI_GP:OFQ19328.1;Name=OFQ19328.1;Note=catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356145.1;locus_tag=HMPREF2948_03370;product=shikimate 5-dehydrogenase;protein_id=OFQ19328.1;transl_table=11 KV814719.1 Genbank gene 43186 43944 . - . ID=gene-HMPREF2948_03375;Name=HMPREF2948_03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03375 KV814719.1 Protein Homology CDS 43186 43944 . - 0 ID=cds-OFQ19329.1;Parent=gene-HMPREF2948_03375;Dbxref=NCBI_GP:OFQ19329.1;Name=OFQ19329.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759059.1;locus_tag=HMPREF2948_03375;product=uridine phosphorylase;protein_id=OFQ19329.1;transl_table=11 KV814719.1 Genbank gene 43992 45491 . - . ID=gene-HMPREF2948_03380;Name=HMPREF2948_03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03380 KV814719.1 Protein Homology CDS 43992 45491 . - 0 ID=cds-OFQ19330.1;Parent=gene-HMPREF2948_03380;Dbxref=NCBI_GP:OFQ19330.1;Name=OFQ19330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007242474.1;locus_tag=HMPREF2948_03380;product=ATP-binding protein;protein_id=OFQ19330.1;transl_table=11 KV814719.1 Genbank gene 45615 46292 . + . ID=gene-HMPREF2948_03385;Name=HMPREF2948_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03385 KV814719.1 Protein Homology CDS 45615 46292 . + 0 ID=cds-OFQ19331.1;Parent=gene-HMPREF2948_03385;Dbxref=NCBI_GP:OFQ19331.1;Name=OFQ19331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064506.1;locus_tag=HMPREF2948_03385;product=molybdenum cofactor sulfurase;protein_id=OFQ19331.1;transl_table=11 KV814719.1 Genbank gene 46282 46755 . + . ID=gene-HMPREF2948_03390;Name=HMPREF2948_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03390 KV814719.1 Protein Homology CDS 46282 46755 . + 0 ID=cds-OFQ19332.1;Parent=gene-HMPREF2948_03390;Dbxref=NCBI_GP:OFQ19332.1;Name=OFQ19332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759031.1;locus_tag=HMPREF2948_03390;product=preprotein translocase subunit SecA;protein_id=OFQ19332.1;transl_table=11 KV814719.1 Genbank gene 46755 47579 . + . ID=gene-HMPREF2948_03395;Name=HMPREF2948_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03395 KV814719.1 Protein Homology CDS 46755 47579 . + 0 ID=cds-OFQ19333.1;Parent=gene-HMPREF2948_03395;Dbxref=NCBI_GP:OFQ19333.1;Name=OFQ19333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064504.1;locus_tag=HMPREF2948_03395;product=hypothetical protein;protein_id=OFQ19333.1;transl_table=11 KV814719.1 Genbank gene 47576 48010 . + . ID=gene-HMPREF2948_03400;Name=HMPREF2948_03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03400 KV814719.1 Protein Homology CDS 47576 48010 . + 0 ID=cds-OFQ19334.1;Parent=gene-HMPREF2948_03400;Dbxref=NCBI_GP:OFQ19334.1;Name=OFQ19334.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694618.1;locus_tag=HMPREF2948_03400;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=OFQ19334.1;transl_table=11 KV814719.1 Genbank gene 48199 49935 . + . ID=gene-HMPREF2948_03405;Name=HMPREF2948_03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03405 KV814719.1 Protein Homology CDS 48199 49935 . + 0 ID=cds-OFQ19335.1;Parent=gene-HMPREF2948_03405;Dbxref=NCBI_GP:OFQ19335.1;Name=OFQ19335.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654307.1;locus_tag=HMPREF2948_03405;product=hypothetical protein;protein_id=OFQ19335.1;transl_table=11 KV814719.1 Genbank gene 49945 53838 . + . ID=gene-HMPREF2948_03410;Name=HMPREF2948_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03410 KV814719.1 Protein Homology CDS 49945 53838 . + 0 ID=cds-OFQ19336.1;Parent=gene-HMPREF2948_03410;Dbxref=NCBI_GP:OFQ19336.1;Name=OFQ19336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694581.1;locus_tag=HMPREF2948_03410;product=tubulin-binding protein;protein_id=OFQ19336.1;transl_table=11 KV814719.1 Genbank gene 53847 55391 . + . ID=gene-HMPREF2948_03415;Name=HMPREF2948_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03415 KV814719.1 Protein Homology CDS 53847 55391 . + 0 ID=cds-OFQ19337.1;Parent=gene-HMPREF2948_03415;Dbxref=NCBI_GP:OFQ19337.1;Name=OFQ19337.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005755413.1;locus_tag=HMPREF2948_03415;product=exopolyphosphatase;protein_id=OFQ19337.1;transl_table=11 KV814719.1 Genbank gene 55414 55779 . - . ID=gene-HMPREF2948_03420;Name=HMPREF2948_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03420 KV814719.1 Protein Homology CDS 55414 55779 . - 0 ID=cds-OFQ19338.1;Parent=gene-HMPREF2948_03420;Dbxref=NCBI_GP:OFQ19338.1;Name=OFQ19338.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699294.1;locus_tag=HMPREF2948_03420;product=hypothetical protein;protein_id=OFQ19338.1;transl_table=11 KV814719.1 Genbank gene 55891 56490 . + . ID=gene-HMPREF2948_03425;Name=HMPREF2948_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03425 KV814719.1 Protein Homology CDS 55891 56490 . + 0 ID=cds-OFQ19339.1;Parent=gene-HMPREF2948_03425;Dbxref=NCBI_GP:OFQ19339.1;Name=OFQ19339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694997.1;locus_tag=HMPREF2948_03425;product=hypothetical protein;protein_id=OFQ19339.1;transl_table=11 KV814719.1 Genbank gene 56490 56969 . + . ID=gene-HMPREF2948_03430;Name=HMPREF2948_03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03430 KV814719.1 Protein Homology CDS 56490 56969 . + 0 ID=cds-OFQ19340.1;Parent=gene-HMPREF2948_03430;Dbxref=NCBI_GP:OFQ19340.1;Name=OFQ19340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699290.1;locus_tag=HMPREF2948_03430;product=hypothetical protein;protein_id=OFQ19340.1;transl_table=11 KV814719.1 Genbank gene 57215 57718 . + . ID=gene-HMPREF2948_03435;Name=HMPREF2948_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03435 KV814719.1 Protein Homology CDS 57215 57718 . + 0 ID=cds-OFQ19341.1;Parent=gene-HMPREF2948_03435;Dbxref=NCBI_GP:OFQ19341.1;Name=OFQ19341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5U9Z9.1;locus_tag=HMPREF2948_03435;product=S-ribosylhomocysteinase;protein_id=OFQ19341.1;transl_table=11 KV814719.1 Genbank gene 57728 58909 . + . ID=gene-HMPREF2948_03440;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=HMPREF2948_03440 KV814719.1 Protein Homology CDS 57728 58909 . + 0 ID=cds-OFQ19342.1;Parent=gene-HMPREF2948_03440;Dbxref=NCBI_GP:OFQ19342.1;Name=OFQ19342.1;Note=non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis;gbkey=CDS;gene=purT;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I203.1;locus_tag=HMPREF2948_03440;product=phosphoribosylglycinamide formyltransferase;protein_id=OFQ19342.1;transl_table=11 KV814719.1 Genbank gene 59626 60261 . - . ID=gene-HMPREF2948_03445;Name=HMPREF2948_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03445 KV814719.1 Protein Homology CDS 59626 60261 . - 0 ID=cds-OFQ19343.1;Parent=gene-HMPREF2948_03445;Dbxref=NCBI_GP:OFQ19343.1;Name=OFQ19343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697329.1;locus_tag=HMPREF2948_03445;product=hypothetical protein;protein_id=OFQ19343.1;transl_table=11 KV814719.1 Genbank gene 60261 60716 . - . ID=gene-HMPREF2948_03450;Name=HMPREF2948_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03450 KV814719.1 Protein Homology CDS 60261 60716 . - 0 ID=cds-OFQ19344.1;Parent=gene-HMPREF2948_03450;Dbxref=NCBI_GP:OFQ19344.1;Name=OFQ19344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525133.1;locus_tag=HMPREF2948_03450;product=hypothetical protein;protein_id=OFQ19344.1;transl_table=11 KV814719.1 Genbank gene 61404 62339 . - . ID=gene-HMPREF2948_03455;Name=HMPREF2948_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03455 KV814719.1 Protein Homology CDS 61404 62339 . - 0 ID=cds-OFQ19345.1;Parent=gene-HMPREF2948_03455;Dbxref=NCBI_GP:OFQ19345.1;Name=OFQ19345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005672415.1;locus_tag=HMPREF2948_03455;product=hydrolase;protein_id=OFQ19345.1;transl_table=11 KV814719.1 Genbank gene 62394 63509 . - . ID=gene-HMPREF2948_03460;Name=HMPREF2948_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03460 KV814719.1 Protein Homology CDS 62394 63509 . - 0 ID=cds-OFQ19346.1;Parent=gene-HMPREF2948_03460;Dbxref=NCBI_GP:OFQ19346.1;Name=OFQ19346.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011978932.1;locus_tag=HMPREF2948_03460;product=aspartate-semialdehyde dehydrogenase;protein_id=OFQ19346.1;transl_table=11 KV814719.1 Genbank pseudogene 63648 65665 . - . ID=gene-HMPREF2948_03465;Name=HMPREF2948_03465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_03465;pseudo=true KV814719.1 Protein Homology CDS 63648 65665 . - 0 ID=cds-HMPREF2948_03465;Parent=gene-HMPREF2948_03465;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064481.1;locus_tag=HMPREF2948_03465;product=adhesin;pseudo=true;transl_table=11 KV814719.1 Genbank gene 65705 67042 . - . ID=gene-HMPREF2948_03470;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=HMPREF2948_03470 KV814719.1 Protein Homology CDS 65705 67042 . - 0 ID=cds-OFQ19347.1;Parent=gene-HMPREF2948_03470;Dbxref=NCBI_GP:OFQ19347.1;Name=OFQ19347.1;Note=catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit;gbkey=CDS;gene=rimO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706136.1;locus_tag=HMPREF2948_03470;product=ribosomal protein S12 methylthiotransferase;protein_id=OFQ19347.1;transl_table=11 KV814719.1 Genbank gene 67208 67924 . + . ID=gene-HMPREF2948_03475;Name=HMPREF2948_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03475 KV814719.1 Protein Homology CDS 67208 67924 . + 0 ID=cds-OFQ19348.1;Parent=gene-HMPREF2948_03475;Dbxref=NCBI_GP:OFQ19348.1;Name=OFQ19348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654516.1;locus_tag=HMPREF2948_03475;product=hypothetical protein;protein_id=OFQ19348.1;transl_table=11 KV814719.1 Genbank gene 68009 70591 . + . ID=gene-HMPREF2948_03480;Name=HMPREF2948_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03480 KV814719.1 Protein Homology CDS 68009 70591 . + 0 ID=cds-OFQ19349.1;Parent=gene-HMPREF2948_03480;Dbxref=NCBI_GP:OFQ19349.1;Name=OFQ19349.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UE20.1;locus_tag=HMPREF2948_03480;product=DNA mismatch repair protein MutS;protein_id=OFQ19349.1;transl_table=11 KV814719.1 Genbank gene 70650 71663 . - . ID=gene-HMPREF2948_03485;Name=HMPREF2948_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03485 KV814719.1 Protein Homology CDS 70650 71663 . - 0 ID=cds-OFQ19350.1;Parent=gene-HMPREF2948_03485;Dbxref=NCBI_GP:OFQ19350.1;Name=OFQ19350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699116.1;locus_tag=HMPREF2948_03485;product=fructose 1%2C6-bisphosphatase;protein_id=OFQ19350.1;transl_table=11 KV814719.1 Genbank gene 71807 72025 . + . ID=gene-HMPREF2948_03490;Name=HMPREF2948_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03490 KV814719.1 Protein Homology CDS 71807 72025 . + 0 ID=cds-OFQ19351.1;Parent=gene-HMPREF2948_03490;Dbxref=NCBI_GP:OFQ19351.1;Name=OFQ19351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44812.1;locus_tag=HMPREF2948_03490;product=cell division protein ZapB;protein_id=OFQ19351.1;transl_table=11 KV814719.1 Genbank gene 72075 72512 . + . ID=gene-HMPREF2948_03495;Name=HMPREF2948_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03495 KV814719.1 Protein Homology CDS 72075 72512 . + 0 ID=cds-OFQ19352.1;Parent=gene-HMPREF2948_03495;Dbxref=NCBI_GP:OFQ19352.1;Name=OFQ19352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699211.1;locus_tag=HMPREF2948_03495;product=FMN-binding protein MioC;protein_id=OFQ19352.1;transl_table=11 KV814719.1 Genbank gene 72943 74832 . + . ID=gene-HMPREF2948_03500;Name=gidA;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=HMPREF2948_03500 KV814719.1 Protein Homology CDS 72943 74832 . + 0 ID=cds-OFQ19353.1;Parent=gene-HMPREF2948_03500;Dbxref=NCBI_GP:OFQ19353.1;Name=OFQ19353.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694554.1;locus_tag=HMPREF2948_03500;product=tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG;protein_id=OFQ19353.1;transl_table=11 KV814719.1 Genbank gene 75003 75614 . + . ID=gene-HMPREF2948_03505;Name=HMPREF2948_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03505 KV814719.1 Protein Homology CDS 75003 75614 . + 0 ID=cds-OFQ19354.1;Parent=gene-HMPREF2948_03505;Dbxref=NCBI_GP:OFQ19354.1;Name=OFQ19354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652031.1;locus_tag=HMPREF2948_03505;product=16S rRNA methyltransferase G;protein_id=OFQ19354.1;transl_table=11 KV814719.1 Genbank gene 75754 76128 . + . ID=gene-HMPREF2948_03510;Name=HMPREF2948_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03510 KV814719.1 Protein Homology CDS 75754 76128 . + 0 ID=cds-OFQ19355.1;Parent=gene-HMPREF2948_03510;Dbxref=NCBI_GP:OFQ19355.1;Name=OFQ19355.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662542.1;locus_tag=HMPREF2948_03510;product=ATP F0F1 synthase subunit I;protein_id=OFQ19355.1;transl_table=11 KV814719.1 Genbank gene 76162 76959 . + . ID=gene-HMPREF2948_03515;Name=HMPREF2948_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03515 KV814719.1 Protein Homology CDS 76162 76959 . + 0 ID=cds-OFQ19356.1;Parent=gene-HMPREF2948_03515;Dbxref=NCBI_GP:OFQ19356.1;Name=OFQ19356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629251.1;locus_tag=HMPREF2948_03515;product=F0F1 ATP synthase subunit A;protein_id=OFQ19356.1;transl_table=11 KV814719.1 Genbank gene 77008 77262 . + . ID=gene-HMPREF2948_03520;Name=HMPREF2948_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03520 KV814719.1 Protein Homology CDS 77008 77262 . + 0 ID=cds-OFQ19357.1;Parent=gene-HMPREF2948_03520;Dbxref=NCBI_GP:OFQ19357.1;Name=OFQ19357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760745.1;locus_tag=HMPREF2948_03520;product=ATP synthase subunit C;protein_id=OFQ19357.1;transl_table=11 KV814719.1 Genbank gene 77301 77771 . + . ID=gene-HMPREF2948_03525;Name=HMPREF2948_03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03525 KV814719.1 Protein Homology CDS 77301 77771 . + 0 ID=cds-OFQ19358.1;Parent=gene-HMPREF2948_03525;Dbxref=NCBI_GP:OFQ19358.1;Name=OFQ19358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A3N2U8.1;locus_tag=HMPREF2948_03525;product=F0F1 ATP synthase subunit B;protein_id=OFQ19358.1;transl_table=11 KV814719.1 Genbank gene 77784 78317 . + . ID=gene-HMPREF2948_03530;Name=HMPREF2948_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03530 KV814719.1 Protein Homology CDS 77784 78317 . + 0 ID=cds-OFQ19359.1;Parent=gene-HMPREF2948_03530;Dbxref=NCBI_GP:OFQ19359.1;Name=OFQ19359.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064468.1;locus_tag=HMPREF2948_03530;product=ATP F0F1 synthase subunit delta;protein_id=OFQ19359.1;transl_table=11 KV814719.1 Genbank gene 78330 79871 . + . ID=gene-HMPREF2948_03535;Name=HMPREF2948_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03535 KV814719.1 Protein Homology CDS 78330 79871 . + 0 ID=cds-OFQ19360.1;Parent=gene-HMPREF2948_03535;Dbxref=NCBI_GP:OFQ19360.1;Name=OFQ19360.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7CPE1.1;locus_tag=HMPREF2948_03535;product=ATP synthase subunit alpha;protein_id=OFQ19360.1;transl_table=11 KV814719.1 Genbank gene 79890 80759 . + . ID=gene-HMPREF2948_03540;Name=HMPREF2948_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03540 KV814719.1 Protein Homology CDS 79890 80759 . + 0 ID=cds-OFQ19361.1;Parent=gene-HMPREF2948_03540;Dbxref=NCBI_GP:OFQ19361.1;Name=OFQ19361.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005825607.1;locus_tag=HMPREF2948_03540;product=F0F1 ATP synthase subunit gamma;protein_id=OFQ19361.1;transl_table=11 KV814719.1 Genbank gene 80776 82149 . + . ID=gene-HMPREF2948_03545;Name=HMPREF2948_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03545 KV814719.1 Protein Homology CDS 80776 82149 . + 0 ID=cds-OFQ19362.1;Parent=gene-HMPREF2948_03545;Dbxref=NCBI_GP:OFQ19362.1;Name=OFQ19362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632228.1;locus_tag=HMPREF2948_03545;product=ATP synthase subunit beta;protein_id=OFQ19362.1;transl_table=11 KV814719.1 Genbank gene 82180 82608 . + . ID=gene-HMPREF2948_03550;Name=atpC;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=HMPREF2948_03550 KV814719.1 Protein Homology CDS 82180 82608 . + 0 ID=cds-OFQ19363.1;Parent=gene-HMPREF2948_03550;Dbxref=NCBI_GP:OFQ19363.1;Name=OFQ19363.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355848.1;locus_tag=HMPREF2948_03550;product=F0F1 ATP synthase subunit epsilon;protein_id=OFQ19363.1;transl_table=11 KV814719.1 Genbank gene 82659 84200 . - . ID=gene-HMPREF2948_03555;Name=HMPREF2948_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03555 KV814719.1 Protein Homology CDS 82659 84200 . - 0 ID=cds-OFQ19364.1;Parent=gene-HMPREF2948_03555;Dbxref=NCBI_GP:OFQ19364.1;Name=OFQ19364.1;Note=threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551086.1;locus_tag=HMPREF2948_03555;product=PLP-dependent threonine dehydratase;protein_id=OFQ19364.1;transl_table=11 KV814719.1 Genbank gene 84281 86119 . - . ID=gene-HMPREF2948_03560;Name=HMPREF2948_03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03560 KV814719.1 Protein Homology CDS 84281 86119 . - 0 ID=cds-OFQ19365.1;Parent=gene-HMPREF2948_03560;Dbxref=NCBI_GP:OFQ19365.1;Name=OFQ19365.1;Note=catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702129.1;locus_tag=HMPREF2948_03560;product=dihydroxy-acid dehydratase;protein_id=OFQ19365.1;transl_table=11 KV814719.1 Genbank gene 86155 86790 . - . ID=gene-HMPREF2948_03565;Name=HMPREF2948_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03565 KV814719.1 Protein Homology CDS 86155 86790 . - 0 ID=cds-OFQ19366.1;Parent=gene-HMPREF2948_03565;Dbxref=NCBI_GP:OFQ19366.1;Name=OFQ19366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064462.1;locus_tag=HMPREF2948_03565;product=hypothetical protein;protein_id=OFQ19366.1;transl_table=11 KV814719.1 Genbank gene 86790 87008 . - . ID=gene-HMPREF2948_03570;Name=HMPREF2948_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03570 KV814719.1 Protein Homology CDS 86790 87008 . - 0 ID=cds-OFQ19367.1;Parent=gene-HMPREF2948_03570;Dbxref=NCBI_GP:OFQ19367.1;Name=OFQ19367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629221.1;locus_tag=HMPREF2948_03570;product=acetolactate synthase;protein_id=OFQ19367.1;transl_table=11 KV814719.1 Genbank gene 87008 88666 . - . ID=gene-HMPREF2948_03575;Name=HMPREF2948_03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03575 KV814719.1 Protein Homology CDS 87008 88666 . - 0 ID=cds-OFQ19368.1;Parent=gene-HMPREF2948_03575;Dbxref=NCBI_GP:OFQ19368.1;Name=OFQ19368.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005819791.1;locus_tag=HMPREF2948_03575;product=acetolactate synthase catalytic subunit;protein_id=OFQ19368.1;transl_table=11 KV814719.1 Genbank gene 88852 89490 . - . ID=gene-HMPREF2948_03580;Name=HMPREF2948_03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03580 KV814719.1 Protein Homology CDS 88852 89490 . - 0 ID=cds-OFQ19369.1;Parent=gene-HMPREF2948_03580;Dbxref=NCBI_GP:OFQ19369.1;Name=OFQ19369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005722878.1;locus_tag=HMPREF2948_03580;product=3-hydroxyisobutyrate dehydrogenase;protein_id=OFQ19369.1;transl_table=11 KV814719.1 Genbank gene 89650 91164 . + . ID=gene-HMPREF2948_03585;Name=HMPREF2948_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03585 KV814719.1 Protein Homology CDS 89650 91164 . + 0 ID=cds-OFQ19370.1;Parent=gene-HMPREF2948_03585;Dbxref=NCBI_GP:OFQ19370.1;Name=OFQ19370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064457.1;locus_tag=HMPREF2948_03585;product=transporter;protein_id=OFQ19370.1;transl_table=11 KV814719.1 Genbank gene 91323 93296 . - . ID=gene-HMPREF2948_03590;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=HMPREF2948_03590 KV814719.1 Protein Homology CDS 91323 93296 . - 0 ID=cds-OFQ19371.1;Parent=gene-HMPREF2948_03590;Dbxref=NCBI_GP:OFQ19371.1;Name=OFQ19371.1;Note=periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate;gbkey=CDS;gene=cpdB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632207.1;locus_tag=HMPREF2948_03590;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=OFQ19371.1;transl_table=11 KV814719.1 Genbank gene 93529 94533 . + . ID=gene-HMPREF2948_03595;Name=HMPREF2948_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03595 KV814719.1 Protein Homology CDS 93529 94533 . + 0 ID=cds-OFQ19372.1;Parent=gene-HMPREF2948_03595;Dbxref=NCBI_GP:OFQ19372.1;Name=OFQ19372.1;Note=catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006985193.1;locus_tag=HMPREF2948_03595;product=ornithine carbamoyltransferase;protein_id=OFQ19372.1;transl_table=11 KV814719.1 Genbank gene 95189 97351 . + . ID=gene-HMPREF2948_03600;Name=HMPREF2948_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03600 KV814719.1 Protein Homology CDS 95189 97351 . + 0 ID=cds-OFQ19373.1;Parent=gene-HMPREF2948_03600;Dbxref=NCBI_GP:OFQ19373.1;Name=OFQ19373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44317.1;locus_tag=HMPREF2948_03600;product=ornithine decarboxylase;protein_id=OFQ19373.1;transl_table=11 KV814719.1 Genbank gene 97457 98773 . + . ID=gene-HMPREF2948_03605;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=HMPREF2948_03605 KV814719.1 Protein Homology CDS 97457 98773 . + 0 ID=cds-OFQ19374.1;Parent=gene-HMPREF2948_03605;Dbxref=NCBI_GP:OFQ19374.1;Name=OFQ19374.1;Note=catalyzes the uptake of putrescine via a proton symport mechanism%2C as well as the efflux of putrescine by a putrescine/ornithine antiport system;gbkey=CDS;gene=potE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694929.1;locus_tag=HMPREF2948_03605;product=putrescine-ornithine antiporter;protein_id=OFQ19374.1;transl_table=11 KV814719.1 Genbank gene 98879 99319 . - . ID=gene-HMPREF2948_03610;Name=HMPREF2948_03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03610 KV814719.1 Protein Homology CDS 98879 99319 . - 0 ID=cds-OFQ19375.1;Parent=gene-HMPREF2948_03610;Dbxref=NCBI_GP:OFQ19375.1;Name=OFQ19375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686055.1;locus_tag=HMPREF2948_03610;product=hypothetical protein;protein_id=OFQ19375.1;transl_table=11 KV814719.1 Genbank gene 99313 100080 . - . ID=gene-HMPREF2948_03615;Name=HMPREF2948_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03615 KV814719.1 Protein Homology CDS 99313 100080 . - 0 ID=cds-OFQ19376.1;Parent=gene-HMPREF2948_03615;Dbxref=NCBI_GP:OFQ19376.1;Name=OFQ19376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637185.1;locus_tag=HMPREF2948_03615;product=DNA polymerase I;protein_id=OFQ19376.1;transl_table=11 KV814719.1 Genbank gene 100062 101153 . - . ID=gene-HMPREF2948_03620;Name=HMPREF2948_03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03620 KV814719.1 Protein Homology CDS 100062 101153 . - 0 ID=cds-OFQ19377.1;Parent=gene-HMPREF2948_03620;Dbxref=NCBI_GP:OFQ19377.1;Name=OFQ19377.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693197.1;locus_tag=HMPREF2948_03620;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=OFQ19377.1;transl_table=11 KV814719.1 Genbank gene 101255 101590 . - . ID=gene-HMPREF2948_03625;Name=HMPREF2948_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03625 KV814719.1 Protein Homology CDS 101255 101590 . - 0 ID=cds-OFQ19378.1;Parent=gene-HMPREF2948_03625;Dbxref=NCBI_GP:OFQ19378.1;Name=OFQ19378.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648303.1;locus_tag=HMPREF2948_03625;product=hypothetical protein;protein_id=OFQ19378.1;transl_table=11 KV814719.1 Genbank gene 101646 102251 . - . ID=gene-HMPREF2948_03630;Name=HMPREF2948_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03630 KV814719.1 Protein Homology CDS 101646 102251 . - 0 ID=cds-OFQ19379.1;Parent=gene-HMPREF2948_03630;Dbxref=NCBI_GP:OFQ19379.1;Name=OFQ19379.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652464.1;locus_tag=HMPREF2948_03630;product=thiol:disulfide interchange protein;protein_id=OFQ19379.1;transl_table=11 KV814719.1 Genbank gene 102261 102527 . - . ID=gene-HMPREF2948_03635;Name=HMPREF2948_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03635 KV814719.1 Protein Homology CDS 102261 102527 . - 0 ID=cds-OFQ19380.1;Parent=gene-HMPREF2948_03635;Dbxref=NCBI_GP:OFQ19380.1;Name=OFQ19380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547759.1;locus_tag=HMPREF2948_03635;product=hypothetical protein;protein_id=OFQ19380.1;transl_table=11 KV814719.1 Genbank gene 102594 103160 . + . ID=gene-HMPREF2948_03640;Name=HMPREF2948_03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03640 KV814719.1 Protein Homology CDS 102594 103160 . + 0 ID=cds-OFQ19381.1;Parent=gene-HMPREF2948_03640;Dbxref=NCBI_GP:OFQ19381.1;Name=OFQ19381.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652462.1;locus_tag=HMPREF2948_03640;product=molybdenum cofactor guanylyltransferase;protein_id=OFQ19381.1;transl_table=11 KV814719.1 Genbank gene 103242 104090 . + . ID=gene-HMPREF2948_03645;Name=HMPREF2948_03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03645 KV814719.1 Protein Homology CDS 103242 104090 . + 0 ID=cds-OFQ19382.1;Parent=gene-HMPREF2948_03645;Dbxref=NCBI_GP:OFQ19382.1;Name=OFQ19382.1;Note=metalloprotease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633091.1;locus_tag=HMPREF2948_03645;product=zinc metalloprotease HtpX;protein_id=OFQ19382.1;transl_table=11 KV814719.1 Genbank gene 104143 105591 . - . ID=gene-HMPREF2948_03650;Name=HMPREF2948_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03650 KV814719.1 Protein Homology CDS 104143 105591 . - 0 ID=cds-OFQ19383.1;Parent=gene-HMPREF2948_03650;Dbxref=NCBI_GP:OFQ19383.1;Name=OFQ19383.1;Note=catalyzes the hydrolysis of Xaa-His dipeptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694919.1;locus_tag=HMPREF2948_03650;product=aminoacyl-histidine dipeptidase;protein_id=OFQ19383.1;transl_table=11 KV814719.1 Genbank gene 105703 106161 . + . ID=gene-HMPREF2948_03655;Name=HMPREF2948_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03655 KV814719.1 Protein Homology CDS 105703 106161 . + 0 ID=cds-OFQ19384.1;Parent=gene-HMPREF2948_03655;Dbxref=NCBI_GP:OFQ19384.1;Name=OFQ19384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65QN6.1;locus_tag=HMPREF2948_03655;product=xanthine phosphoribosyltransferase;protein_id=OFQ19384.1;transl_table=11 KV814719.1 Genbank gene 106271 109750 . + . ID=gene-HMPREF2948_03660;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=HMPREF2948_03660 KV814719.1 Protein Homology CDS 106271 109750 . + 0 ID=cds-OFQ19385.1;Parent=gene-HMPREF2948_03660;Dbxref=NCBI_GP:OFQ19385.1;Name=OFQ19385.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699176.1;locus_tag=HMPREF2948_03660;product=DNA polymerase III subunit alpha;protein_id=OFQ19385.1;transl_table=11 KV814719.1 Genbank gene 109828 110367 . + . ID=gene-HMPREF2948_03665;Name=HMPREF2948_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03665 KV814719.1 Protein Homology CDS 109828 110367 . + 0 ID=cds-OFQ19386.1;Parent=gene-HMPREF2948_03665;Dbxref=NCBI_GP:OFQ19386.1;Name=OFQ19386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44722.1;locus_tag=HMPREF2948_03665;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase;protein_id=OFQ19386.1;transl_table=11 KV814719.1 Genbank gene 110445 111377 . + . ID=gene-HMPREF2948_03670;Name=HMPREF2948_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03670 KV814719.1 Protein Homology CDS 110445 111377 . + 0 ID=cds-OFQ19387.1;Parent=gene-HMPREF2948_03670;Dbxref=NCBI_GP:OFQ19387.1;Name=OFQ19387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961676.1;locus_tag=HMPREF2948_03670;product=peptidylprolyl isomerase;protein_id=OFQ19387.1;transl_table=11 KV814719.1 Genbank gene 111442 112491 . + . ID=gene-HMPREF2948_03675;Name=HMPREF2948_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03675 KV814719.1 Protein Homology CDS 111442 112491 . + 0 ID=cds-OFQ19388.1;Parent=gene-HMPREF2948_03675;Dbxref=NCBI_GP:OFQ19388.1;Name=OFQ19388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694914.1;locus_tag=HMPREF2948_03675;product=aminodeoxychorismate lyase;protein_id=OFQ19388.1;transl_table=11 KV814719.1 Genbank gene 112491 113123 . + . ID=gene-HMPREF2948_03680;Name=HMPREF2948_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03680 KV814719.1 Protein Homology CDS 112491 113123 . + 0 ID=cds-OFQ19389.1;Parent=gene-HMPREF2948_03680;Dbxref=NCBI_GP:OFQ19389.1;Name=OFQ19389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064441.1;locus_tag=HMPREF2948_03680;product=dTMP kinase;protein_id=OFQ19389.1;transl_table=11 KV814719.1 Genbank gene 113120 114100 . + . ID=gene-HMPREF2948_03685;Name=HMPREF2948_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03685 KV814719.1 Protein Homology CDS 113120 114100 . + 0 ID=cds-OFQ19390.1;Parent=gene-HMPREF2948_03685;Dbxref=NCBI_GP:OFQ19390.1;Name=OFQ19390.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064440.1;locus_tag=HMPREF2948_03685;product=DNA polymerase III subunit delta';protein_id=OFQ19390.1;transl_table=11 KV814719.1 Genbank gene 114108 114890 . + . ID=gene-HMPREF2948_03690;Name=HMPREF2948_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03690 KV814719.1 Protein Homology CDS 114108 114890 . + 0 ID=cds-OFQ19391.1;Parent=gene-HMPREF2948_03690;Dbxref=NCBI_GP:OFQ19391.1;Name=OFQ19391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064439.1;locus_tag=HMPREF2948_03690;product=DNAse;protein_id=OFQ19391.1;transl_table=11 KV814719.1 Genbank gene 114917 115441 . + . ID=gene-HMPREF2948_03695;Name=HMPREF2948_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03695 KV814719.1 Protein Homology CDS 114917 115441 . + 0 ID=cds-OFQ19392.1;Parent=gene-HMPREF2948_03695;Dbxref=NCBI_GP:OFQ19392.1;Name=OFQ19392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355841.1;locus_tag=HMPREF2948_03695;product=hypothetical protein;protein_id=OFQ19392.1;transl_table=11 KV814719.1 Genbank gene 115554 116864 . + . ID=gene-HMPREF2948_03700;Name=HMPREF2948_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03700 KV814719.1 Protein Homology CDS 115554 116864 . + 0 ID=cds-OFQ19393.1;Parent=gene-HMPREF2948_03700;Dbxref=NCBI_GP:OFQ19393.1;Name=OFQ19393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064437.1;locus_tag=HMPREF2948_03700;product=hypothetical protein;protein_id=OFQ19393.1;transl_table=11 KV814719.1 Genbank gene 116946 117476 . + . ID=gene-HMPREF2948_03705;Name=HMPREF2948_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03705 KV814719.1 Protein Homology CDS 116946 117476 . + 0 ID=cds-OFQ19394.1;Parent=gene-HMPREF2948_03705;Dbxref=NCBI_GP:OFQ19394.1;Name=OFQ19394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526465.1;locus_tag=HMPREF2948_03705;product=hypothetical protein;protein_id=OFQ19394.1;transl_table=11 KV814719.1 Genbank gene 117551 119068 . + . ID=gene-HMPREF2948_03710;Name=HMPREF2948_03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03710 KV814719.1 Protein Homology CDS 117551 119068 . + 0 ID=cds-OFQ19395.1;Parent=gene-HMPREF2948_03710;Dbxref=NCBI_GP:OFQ19395.1;Name=OFQ19395.1;Note=phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064435.1;locus_tag=HMPREF2948_03710;product=bifunctional PTS fructose transporter subunit IIA/HPr protein;protein_id=OFQ19395.1;transl_table=11 KV814719.1 Genbank gene 119072 120013 . + . ID=gene-HMPREF2948_03715;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=HMPREF2948_03715 KV814719.1 Protein Homology CDS 119072 120013 . + 0 ID=cds-OFQ19396.1;Parent=gene-HMPREF2948_03715;Dbxref=NCBI_GP:OFQ19396.1;Name=OFQ19396.1;Note=converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers;gbkey=CDS;gene=fruK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760751.1;locus_tag=HMPREF2948_03715;product=1-phosphofructokinase;protein_id=OFQ19396.1;transl_table=11 KV814719.1 Genbank gene 120018 121694 . + . ID=gene-HMPREF2948_03720;Name=HMPREF2948_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03720 KV814719.1 Protein Homology CDS 120018 121694 . + 0 ID=cds-OFQ19397.1;Parent=gene-HMPREF2948_03720;Dbxref=NCBI_GP:OFQ19397.1;Name=OFQ19397.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699212.1;locus_tag=HMPREF2948_03720;product=PTS fructose transporter subunit EIIBC;protein_id=OFQ19397.1;transl_table=11 KV814719.1 Genbank gene 121780 122037 . + . ID=gene-HMPREF2948_03725;Name=HMPREF2948_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03725 KV814719.1 Protein Homology CDS 121780 122037 . + 0 ID=cds-OFQ19398.1;Parent=gene-HMPREF2948_03725;Dbxref=NCBI_GP:OFQ19398.1;Name=OFQ19398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694903.1;locus_tag=HMPREF2948_03725;product=hypothetical protein;protein_id=OFQ19398.1;transl_table=11 KV814719.1 Genbank gene 122154 122729 . + . ID=gene-HMPREF2948_03730;Name=HMPREF2948_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03730 KV814719.1 Protein Homology CDS 122154 122729 . + 0 ID=cds-OFQ19399.1;Parent=gene-HMPREF2948_03730;Dbxref=NCBI_GP:OFQ19399.1;Name=OFQ19399.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005760824.1;locus_tag=HMPREF2948_03730;product=RNA polymerase sigma factor RpoE;protein_id=OFQ19399.1;transl_table=11 KV814719.1 Genbank gene 122751 123332 . + . ID=gene-HMPREF2948_03735;Name=HMPREF2948_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03735 KV814719.1 Protein Homology CDS 122751 123332 . + 0 ID=cds-OFQ19400.1;Parent=gene-HMPREF2948_03735;Dbxref=NCBI_GP:OFQ19400.1;Name=OFQ19400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651258.1;locus_tag=HMPREF2948_03735;product=transcriptional regulator;protein_id=OFQ19400.1;transl_table=11 KV814719.1 Genbank gene 123403 124347 . + . ID=gene-HMPREF2948_03740;Name=HMPREF2948_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03740 KV814719.1 Protein Homology CDS 123403 124347 . + 0 ID=cds-OFQ19401.1;Parent=gene-HMPREF2948_03740;Dbxref=NCBI_GP:OFQ19401.1;Name=OFQ19401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064429.1;locus_tag=HMPREF2948_03740;product=transcriptional regulator;protein_id=OFQ19401.1;transl_table=11 KV814719.1 Genbank gene 124483 124992 . + . ID=gene-HMPREF2948_03745;Name=HMPREF2948_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03745 KV814719.1 Protein Homology CDS 124483 124992 . + 0 ID=cds-OFQ19402.1;Parent=gene-HMPREF2948_03745;Dbxref=NCBI_GP:OFQ19402.1;Name=OFQ19402.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694897.1;locus_tag=HMPREF2948_03745;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=OFQ19402.1;transl_table=11 KV814719.1 Genbank gene 124971 126380 . + . ID=gene-HMPREF2948_03750;Name=HMPREF2948_03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03750 KV814719.1 Protein Homology CDS 124971 126380 . + 0 ID=cds-OFQ19403.1;Parent=gene-HMPREF2948_03750;Dbxref=NCBI_GP:OFQ19403.1;Name=OFQ19403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694896.1;locus_tag=HMPREF2948_03750;product=MFS transporter;protein_id=OFQ19403.1;transl_table=11 KV814719.1 Genbank gene 126514 128160 . + . ID=gene-HMPREF2948_03755;Name=HMPREF2948_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03755 KV814719.1 Protein Homology CDS 126514 128160 . + 0 ID=cds-OFQ19404.1;Parent=gene-HMPREF2948_03755;Dbxref=NCBI_GP:OFQ19404.1;Name=OFQ19404.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652480.1;locus_tag=HMPREF2948_03755;product=peptide transporter;protein_id=OFQ19404.1;transl_table=11 KV814719.1 Genbank gene 128227 128859 . + . ID=gene-HMPREF2948_03760;Name=HMPREF2948_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03760 KV814719.1 Protein Homology CDS 128227 128859 . + 0 ID=cds-OFQ19405.1;Parent=gene-HMPREF2948_03760;Dbxref=NCBI_GP:OFQ19405.1;Name=OFQ19405.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005599834.1;locus_tag=HMPREF2948_03760;product=pyridoxamine 5'-phosphate oxidase;protein_id=OFQ19405.1;transl_table=11 KV814719.1 Genbank gene 128970 129881 . - . ID=gene-HMPREF2948_03765;Name=HMPREF2948_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03765 KV814719.1 GeneMarkS+ CDS 128970 129881 . - 0 ID=cds-OFQ19406.1;Parent=gene-HMPREF2948_03765;Dbxref=NCBI_GP:OFQ19406.1;Name=OFQ19406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_03765;product=hypothetical protein;protein_id=OFQ19406.1;transl_table=11 KV814719.1 Genbank pseudogene 130124 130987 . - . ID=gene-HMPREF2948_03770;Name=HMPREF2948_03770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_03770;pseudo=true KV814719.1 Protein Homology CDS 130124 130987 . - 0 ID=cds-HMPREF2948_03770;Parent=gene-HMPREF2948_03770;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699101.1;locus_tag=HMPREF2948_03770;product=oxidoreductase;pseudo=true;transl_table=11 KV814719.1 Genbank gene 130980 131396 . + . ID=gene-HMPREF2948_03775;Name=HMPREF2948_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03775 KV814719.1 GeneMarkS+ CDS 130980 131396 . + 0 ID=cds-OFQ19407.1;Parent=gene-HMPREF2948_03775;Dbxref=NCBI_GP:OFQ19407.1;Name=OFQ19407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_03775;product=hypothetical protein;protein_id=OFQ19407.1;transl_table=11 KV814719.1 Genbank gene 131552 132937 . + . ID=gene-HMPREF2948_03780;Name=HMPREF2948_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03780 KV814719.1 Protein Homology CDS 131552 132937 . + 0 ID=cds-OFQ19408.1;Parent=gene-HMPREF2948_03780;Dbxref=NCBI_GP:OFQ19408.1;Name=OFQ19408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718416.1;locus_tag=HMPREF2948_03780;product=transporter;protein_id=OFQ19408.1;transl_table=11 KV814719.1 Genbank gene 133008 133229 . - . ID=gene-HMPREF2948_03785;Name=HMPREF2948_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03785 KV814719.1 Protein Homology CDS 133008 133229 . - 0 ID=cds-OFQ19409.1;Parent=gene-HMPREF2948_03785;Dbxref=NCBI_GP:OFQ19409.1;Name=OFQ19409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0UWB7.1;locus_tag=HMPREF2948_03785;product=SlyX protein;protein_id=OFQ19409.1;transl_table=11 KV814719.1 Genbank gene 133324 134046 . + . ID=gene-HMPREF2948_03790;Name=HMPREF2948_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03790 KV814719.1 Protein Homology CDS 133324 134046 . + 0 ID=cds-OFQ19410.1;Parent=gene-HMPREF2948_03790;Dbxref=NCBI_GP:OFQ19410.1;Name=OFQ19410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005539597.1;locus_tag=HMPREF2948_03790;product=peptidylprolyl isomerase;protein_id=OFQ19410.1;transl_table=11 KV814719.1 Genbank gene 134109 134771 . + . ID=gene-HMPREF2948_03795;Name=HMPREF2948_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03795 KV814719.1 Protein Homology CDS 134109 134771 . + 0 ID=cds-OFQ19460.1;Parent=gene-HMPREF2948_03795;Dbxref=NCBI_GP:OFQ19460.1;Name=OFQ19460.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005539599.1;locus_tag=HMPREF2948_03795;product=hypothetical protein;protein_id=OFQ19460.1;transl_table=11 KV814719.1 Genbank gene 134771 135151 . + . ID=gene-HMPREF2948_03800;Name=HMPREF2948_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03800 KV814719.1 Protein Homology CDS 134771 135151 . + 0 ID=cds-OFQ19411.1;Parent=gene-HMPREF2948_03800;Dbxref=NCBI_GP:OFQ19411.1;Name=OFQ19411.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499553.1;locus_tag=HMPREF2948_03800;product=sulfurtransferase;protein_id=OFQ19411.1;transl_table=11 KV814719.1 Genbank gene 135148 135507 . + . ID=gene-HMPREF2948_03805;Name=HMPREF2948_03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03805 KV814719.1 Protein Homology CDS 135148 135507 . + 0 ID=cds-OFQ19412.1;Parent=gene-HMPREF2948_03805;Dbxref=NCBI_GP:OFQ19412.1;Name=OFQ19412.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644410.1;locus_tag=HMPREF2948_03805;product=sulfurtransferase;protein_id=OFQ19412.1;transl_table=11 KV814719.1 Genbank gene 135516 135803 . + . ID=gene-HMPREF2948_03810;Name=HMPREF2948_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03810 KV814719.1 Protein Homology CDS 135516 135803 . + 0 ID=cds-OFQ19413.1;Parent=gene-HMPREF2948_03810;Dbxref=NCBI_GP:OFQ19413.1;Name=OFQ19413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649577.1;locus_tag=HMPREF2948_03810;product=hypothetical protein;protein_id=OFQ19413.1;transl_table=11 KV814719.1 Genbank gene 135798 136199 . - . ID=gene-HMPREF2948_03815;Name=HMPREF2948_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03815 KV814719.1 Protein Homology CDS 135798 136199 . - 0 ID=cds-OFQ19414.1;Parent=gene-HMPREF2948_03815;Dbxref=NCBI_GP:OFQ19414.1;Name=OFQ19414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699125.1;locus_tag=HMPREF2948_03815;product=hypothetical protein;protein_id=OFQ19414.1;transl_table=11 KV814719.1 Genbank gene 136267 136755 . - . ID=gene-HMPREF2948_03820;Name=HMPREF2948_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03820 KV814719.1 Protein Homology CDS 136267 136755 . - 0 ID=cds-OFQ19415.1;Parent=gene-HMPREF2948_03820;Dbxref=NCBI_GP:OFQ19415.1;Name=OFQ19415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015584606.1;locus_tag=HMPREF2948_03820;product=hypothetical protein;protein_id=OFQ19415.1;transl_table=11 KV814719.1 Genbank gene 136913 137311 . + . ID=gene-HMPREF2948_03825;Name=HMPREF2948_03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03825 KV814719.1 Protein Homology CDS 136913 137311 . + 0 ID=cds-OFQ19416.1;Parent=gene-HMPREF2948_03825;Dbxref=NCBI_GP:OFQ19416.1;Name=OFQ19416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064402.1;locus_tag=HMPREF2948_03825;product=deoxyribonuclease;protein_id=OFQ19416.1;transl_table=11 KV814719.1 Genbank gene 137365 138222 . - . ID=gene-HMPREF2948_03830;Name=HMPREF2948_03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03830 KV814719.1 Protein Homology CDS 137365 138222 . - 0 ID=cds-OFQ19417.1;Parent=gene-HMPREF2948_03830;Dbxref=NCBI_GP:OFQ19417.1;Name=OFQ19417.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064400.1;locus_tag=HMPREF2948_03830;product=ABC transporter substrate-binding protein;protein_id=OFQ19417.1;transl_table=11 KV814719.1 Genbank gene 138206 138970 . - . ID=gene-HMPREF2948_03835;Name=HMPREF2948_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03835 KV814719.1 Protein Homology CDS 138206 138970 . - 0 ID=cds-OFQ19418.1;Parent=gene-HMPREF2948_03835;Dbxref=NCBI_GP:OFQ19418.1;Name=OFQ19418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638718.1;locus_tag=HMPREF2948_03835;product=glutamine ABC transporter ATP-binding protein;protein_id=OFQ19418.1;transl_table=11 KV814719.1 Genbank gene 138989 139657 . - . ID=gene-HMPREF2948_03840;Name=HMPREF2948_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03840 KV814719.1 Protein Homology CDS 138989 139657 . - 0 ID=cds-OFQ19419.1;Parent=gene-HMPREF2948_03840;Dbxref=NCBI_GP:OFQ19419.1;Name=OFQ19419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064398.1;locus_tag=HMPREF2948_03840;product=amino acid ABC transporter permease;protein_id=OFQ19419.1;transl_table=11 KV814719.1 Genbank gene 139647 140306 . - . ID=gene-HMPREF2948_03845;Name=HMPREF2948_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03845 KV814719.1 Protein Homology CDS 139647 140306 . - 0 ID=cds-OFQ19420.1;Parent=gene-HMPREF2948_03845;Dbxref=NCBI_GP:OFQ19420.1;Name=OFQ19420.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524396.1;locus_tag=HMPREF2948_03845;product=amino acid ABC transporter;protein_id=OFQ19420.1;transl_table=11 KV814719.1 Genbank gene 140480 141766 . - . ID=gene-HMPREF2948_03850;Name=HMPREF2948_03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03850 KV814719.1 Protein Homology CDS 140480 141766 . - 0 ID=cds-OFQ19421.1;Parent=gene-HMPREF2948_03850;Dbxref=NCBI_GP:OFQ19421.1;Name=OFQ19421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064396.1;locus_tag=HMPREF2948_03850;product=heme biosynthesis protein HemY;protein_id=OFQ19421.1;transl_table=11 KV814719.1 Genbank gene 141776 143074 . - . ID=gene-HMPREF2948_03855;Name=HMPREF2948_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03855 KV814719.1 Protein Homology CDS 141776 143074 . - 0 ID=cds-OFQ19422.1;Parent=gene-HMPREF2948_03855;Dbxref=NCBI_GP:OFQ19422.1;Name=OFQ19422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694856.1;locus_tag=HMPREF2948_03855;product=HemX protein;protein_id=OFQ19422.1;transl_table=11 KV814719.1 Genbank gene 143084 143845 . - . ID=gene-HMPREF2948_03860;Name=HMPREF2948_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03860 KV814719.1 Protein Homology CDS 143084 143845 . - 0 ID=cds-OFQ19423.1;Parent=gene-HMPREF2948_03860;Dbxref=NCBI_GP:OFQ19423.1;Name=OFQ19423.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694855.1;locus_tag=HMPREF2948_03860;product=uroporphyrinogen-III synthase;protein_id=OFQ19423.1;transl_table=11 KV814719.1 Genbank gene 143855 144787 . - . ID=gene-HMPREF2948_03865;Name=HMPREF2948_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03865 KV814719.1 Protein Homology CDS 143855 144787 . - 0 ID=cds-OFQ19424.1;Parent=gene-HMPREF2948_03865;Dbxref=NCBI_GP:OFQ19424.1;Name=OFQ19424.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699175.1;locus_tag=HMPREF2948_03865;product=hydroxymethylbilane synthase;protein_id=OFQ19424.1;transl_table=11 KV814719.1 Genbank gene 144924 147428 . + . ID=gene-HMPREF2948_03870;Name=HMPREF2948_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03870 KV814719.1 Protein Homology CDS 144924 147428 . + 0 ID=cds-OFQ19425.1;Parent=gene-HMPREF2948_03870;Dbxref=NCBI_GP:OFQ19425.1;Name=OFQ19425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699130.1;locus_tag=HMPREF2948_03870;product=adenylate cyclase;protein_id=OFQ19425.1;transl_table=11 KV814719.1 Genbank gene 147610 148239 . + . ID=gene-HMPREF2948_03875;Name=HMPREF2948_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03875 KV814719.1 Protein Homology CDS 147610 148239 . + 0 ID=cds-OFQ19426.1;Parent=gene-HMPREF2948_03875;Dbxref=NCBI_GP:OFQ19426.1;Name=OFQ19426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005724807.1;locus_tag=HMPREF2948_03875;product=DNA-binding response regulator;protein_id=OFQ19426.1;transl_table=11 KV814719.1 Genbank gene 148289 149131 . - . ID=gene-HMPREF2948_03880;Name=HMPREF2948_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03880 KV814719.1 Protein Homology CDS 148289 149131 . - 0 ID=cds-OFQ19427.1;Parent=gene-HMPREF2948_03880;Dbxref=NCBI_GP:OFQ19427.1;Name=OFQ19427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869050.1;locus_tag=HMPREF2948_03880;product=hypothetical protein;protein_id=OFQ19427.1;transl_table=11 KV814719.1 Genbank gene 149131 150363 . - . ID=gene-HMPREF2948_03885;Name=HMPREF2948_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03885 KV814719.1 Protein Homology CDS 149131 150363 . - 0 ID=cds-OFQ19428.1;Parent=gene-HMPREF2948_03885;Dbxref=NCBI_GP:OFQ19428.1;Name=OFQ19428.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693155.1;locus_tag=HMPREF2948_03885;product=hypothetical protein;protein_id=OFQ19428.1;transl_table=11 KV814719.1 Genbank gene 150550 151233 . + . ID=gene-HMPREF2948_03890;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=HMPREF2948_03890 KV814719.1 Protein Homology CDS 150550 151233 . + 0 ID=cds-OFQ19429.1;Parent=gene-HMPREF2948_03890;Dbxref=NCBI_GP:OFQ19429.1;Name=OFQ19429.1;Note=2%2C3-bisphosphoglycerate-dependent%3B catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate;gbkey=CDS;gene=gpmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019270886.1;locus_tag=HMPREF2948_03890;product=phosphoglyceromutase;protein_id=OFQ19429.1;transl_table=11 KV814719.1 Genbank gene 151298 152107 . + . ID=gene-HMPREF2948_03895;Name=HMPREF2948_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03895 KV814719.1 Protein Homology CDS 151298 152107 . + 0 ID=cds-OFQ19430.1;Parent=gene-HMPREF2948_03895;Dbxref=NCBI_GP:OFQ19430.1;Name=OFQ19430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064376.1;locus_tag=HMPREF2948_03895;product=hypothetical protein;protein_id=OFQ19430.1;transl_table=11 KV814719.1 Genbank gene 152110 152799 . - . ID=gene-HMPREF2948_03900;Name=HMPREF2948_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03900 KV814719.1 Protein Homology CDS 152110 152799 . - 0 ID=cds-OFQ19431.1;Parent=gene-HMPREF2948_03900;Dbxref=NCBI_GP:OFQ19431.1;Name=OFQ19431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699300.1;locus_tag=HMPREF2948_03900;product=pseudouridine synthase;protein_id=OFQ19431.1;transl_table=11 KV814719.1 Genbank gene 152899 154377 . - . ID=gene-HMPREF2948_03905;Name=HMPREF2948_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03905 KV814719.1 Protein Homology CDS 152899 154377 . - 0 ID=cds-OFQ19432.1;Parent=gene-HMPREF2948_03905;Dbxref=NCBI_GP:OFQ19432.1;Name=OFQ19432.1;Note=catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654301.1;locus_tag=HMPREF2948_03905;product=ketol-acid reductoisomerase;protein_id=OFQ19432.1;transl_table=11 KV814719.1 Genbank gene 154930 155808 . + . ID=gene-HMPREF2948_03910;Name=HMPREF2948_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03910 KV814719.1 Protein Homology CDS 154930 155808 . + 0 ID=cds-OFQ19433.1;Parent=gene-HMPREF2948_03910;Dbxref=NCBI_GP:OFQ19433.1;Name=OFQ19433.1;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694606.1;locus_tag=HMPREF2948_03910;product=transcriptional regulator IlvY;protein_id=OFQ19433.1;transl_table=11 KV814719.1 Genbank gene 155839 156717 . + . ID=gene-HMPREF2948_03915;Name=HMPREF2948_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03915 KV814719.1 Protein Homology CDS 155839 156717 . + 0 ID=cds-OFQ19434.1;Parent=gene-HMPREF2948_03915;Dbxref=NCBI_GP:OFQ19434.1;Name=OFQ19434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633165.1;locus_tag=HMPREF2948_03915;product=permease;protein_id=OFQ19434.1;transl_table=11 KV814719.1 Genbank gene 156718 157035 . + . ID=gene-HMPREF2948_03920;Name=HMPREF2948_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03920 KV814719.1 Protein Homology CDS 156718 157035 . + 0 ID=cds-OFQ19435.1;Parent=gene-HMPREF2948_03920;Dbxref=NCBI_GP:OFQ19435.1;Name=OFQ19435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995255.1;locus_tag=HMPREF2948_03920;product=thiosulfate sulfurtransferase;protein_id=OFQ19435.1;transl_table=11 KV814719.1 Genbank gene 157107 159791 . - . ID=gene-HMPREF2948_03925;Name=HMPREF2948_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03925 KV814719.1 Protein Homology CDS 157107 159791 . - 0 ID=cds-OFQ19436.1;Parent=gene-HMPREF2948_03925;Dbxref=NCBI_GP:OFQ19436.1;Name=OFQ19436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708172.1;locus_tag=HMPREF2948_03925;product=hypothetical protein;protein_id=OFQ19436.1;transl_table=11 KV814719.1 Genbank gene 159964 161880 . + . ID=gene-HMPREF2948_03930;Name=HMPREF2948_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03930 KV814719.1 Protein Homology CDS 159964 161880 . + 0 ID=cds-OFQ19437.1;Parent=gene-HMPREF2948_03930;Dbxref=NCBI_GP:OFQ19437.1;Name=OFQ19437.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694483.1;locus_tag=HMPREF2948_03930;product=ABC transporter ATP-binding protein;protein_id=OFQ19437.1;transl_table=11 KV814719.1 Genbank gene 161890 162426 . + . ID=gene-HMPREF2948_03935;Name=HMPREF2948_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03935 KV814719.1 Protein Homology CDS 161890 162426 . + 0 ID=cds-OFQ19438.1;Parent=gene-HMPREF2948_03935;Dbxref=NCBI_GP:OFQ19438.1;Name=OFQ19438.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694485.1;locus_tag=HMPREF2948_03935;product=hypothetical protein;protein_id=OFQ19438.1;transl_table=11 KV814719.1 Genbank gene 162442 162993 . + . ID=gene-HMPREF2948_03940;Name=HMPREF2948_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03940 KV814719.1 Protein Homology CDS 162442 162993 . + 0 ID=cds-OFQ19439.1;Parent=gene-HMPREF2948_03940;Dbxref=NCBI_GP:OFQ19439.1;Name=OFQ19439.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688145.1;locus_tag=HMPREF2948_03940;product=tRNA threonylcarbamoyladenosine biosynthesis protein RimN;protein_id=OFQ19439.1;transl_table=11 KV814719.1 Genbank gene 162997 163815 . + . ID=gene-HMPREF2948_03945;Name=HMPREF2948_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03945 KV814719.1 Protein Homology CDS 162997 163815 . + 0 ID=cds-OFQ19440.1;Parent=gene-HMPREF2948_03945;Dbxref=NCBI_GP:OFQ19440.1;Name=OFQ19440.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005665181.1;locus_tag=HMPREF2948_03945;product=shikimate dehydrogenase;protein_id=OFQ19440.1;transl_table=11 KV814719.1 Genbank gene 163812 164369 . + . ID=gene-HMPREF2948_03950;Name=HMPREF2948_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03950 KV814719.1 Protein Homology CDS 163812 164369 . + 0 ID=cds-OFQ19441.1;Parent=gene-HMPREF2948_03950;Dbxref=NCBI_GP:OFQ19441.1;Name=OFQ19441.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054647.1;locus_tag=HMPREF2948_03950;product=DNA-3-methyladenine glycosidase;protein_id=OFQ19441.1;transl_table=11 KV814719.1 Genbank gene 164416 166758 . + . ID=gene-HMPREF2948_03955;Name=HMPREF2948_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03955 KV814719.1 Protein Homology CDS 164416 166758 . + 0 ID=cds-OFQ19442.1;Parent=gene-HMPREF2948_03955;Dbxref=NCBI_GP:OFQ19442.1;Name=OFQ19442.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693136.1;locus_tag=HMPREF2948_03955;product=LPS assembly protein LptD;protein_id=OFQ19442.1;transl_table=11 KV814719.1 Genbank gene 166840 167727 . - . ID=gene-HMPREF2948_03960;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=HMPREF2948_03960 KV814719.1 Protein Homology CDS 166840 167727 . - 0 ID=cds-OFQ19443.1;Parent=gene-HMPREF2948_03960;Dbxref=NCBI_GP:OFQ19443.1;Name=OFQ19443.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692390.1;locus_tag=HMPREF2948_03960;product=tyrosine recombinase XerC;protein_id=OFQ19443.1;transl_table=11 KV814719.1 Genbank gene 167727 168161 . - . ID=gene-HMPREF2948_03965;Name=HMPREF2948_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03965 KV814719.1 Protein Homology CDS 167727 168161 . - 0 ID=cds-OFQ19444.1;Parent=gene-HMPREF2948_03965;Dbxref=NCBI_GP:OFQ19444.1;Name=OFQ19444.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44036.1;locus_tag=HMPREF2948_03965;product=hypothetical protein;protein_id=OFQ19444.1;transl_table=11 KV814719.1 Genbank gene 168361 169152 . + . ID=gene-HMPREF2948_03970;Name=HMPREF2948_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03970 KV814719.1 Protein Homology CDS 168361 169152 . + 0 ID=cds-OFQ19445.1;Parent=gene-HMPREF2948_03970;Dbxref=NCBI_GP:OFQ19445.1;Name=OFQ19445.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805179.1;locus_tag=HMPREF2948_03970;product=triose-phosphate isomerase;protein_id=OFQ19445.1;transl_table=11 KV814719.1 Genbank gene 169236 169559 . - . ID=gene-HMPREF2948_03975;Name=HMPREF2948_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03975 KV814719.1 Protein Homology CDS 169236 169559 . - 0 ID=cds-OFQ19446.1;Parent=gene-HMPREF2948_03975;Dbxref=NCBI_GP:OFQ19446.1;Name=OFQ19446.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644242.1;locus_tag=HMPREF2948_03975;product=hypothetical protein;protein_id=OFQ19446.1;transl_table=11 KV814719.1 Genbank gene 169866 173462 . + . ID=gene-HMPREF2948_03980;Name=HMPREF2948_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03980 KV814719.1 GeneMarkS+ CDS 169866 173462 . + 0 ID=cds-OFQ19447.1;Parent=gene-HMPREF2948_03980;Dbxref=NCBI_GP:OFQ19447.1;Name=OFQ19447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_03980;product=hypothetical protein;protein_id=OFQ19447.1;transl_table=11 KV814719.1 Genbank gene 173548 174306 . - . ID=gene-HMPREF2948_03985;Name=HMPREF2948_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03985 KV814719.1 Protein Homology CDS 173548 174306 . - 0 ID=cds-OFQ19448.1;Parent=gene-HMPREF2948_03985;Dbxref=NCBI_GP:OFQ19448.1;Name=OFQ19448.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694490.1;locus_tag=HMPREF2948_03985;product=glycosyltransferase;protein_id=OFQ19448.1;transl_table=11 KV814719.1 Genbank gene 174368 175663 . + . ID=gene-HMPREF2948_03990;Name=HMPREF2948_03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_03990 KV814719.1 Protein Homology CDS 174368 175663 . + 0 ID=cds-OFQ19449.1;Parent=gene-HMPREF2948_03990;Dbxref=NCBI_GP:OFQ19449.1;Name=OFQ19449.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064371.1;locus_tag=HMPREF2948_03990;product=3-deoxy-D-manno-octulosonic acid transferase;protein_id=OFQ19449.1;transl_table=11 KV814719.1 Genbank gene 175660 176136 . + . ID=gene-HMPREF2948_03995;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=HMPREF2948_03995 KV814719.1 Protein Homology CDS 175660 176136 . + 0 ID=cds-OFQ19450.1;Parent=gene-HMPREF2948_03995;Dbxref=NCBI_GP:OFQ19450.1;Name=OFQ19450.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567117.1;locus_tag=HMPREF2948_03995;product=pantetheine-phosphate adenylyltransferase;protein_id=OFQ19450.1;transl_table=11 KV814719.1 Genbank gene 176133 176345 . + . ID=gene-HMPREF2948_04000;Name=HMPREF2948_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04000 KV814719.1 Protein Homology CDS 176133 176345 . + 0 ID=cds-OFQ19451.1;Parent=gene-HMPREF2948_04000;Dbxref=NCBI_GP:OFQ19451.1;Name=OFQ19451.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694824.1;locus_tag=HMPREF2948_04000;product=hypothetical protein;protein_id=OFQ19451.1;transl_table=11 KV814719.1 Genbank gene 176359 178371 . + . ID=gene-HMPREF2948_04005;Name=HMPREF2948_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04005 KV814719.1 Protein Homology CDS 176359 178371 . + 0 ID=cds-OFQ19452.1;Parent=gene-HMPREF2948_04005;Dbxref=NCBI_GP:OFQ19452.1;Name=OFQ19452.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526334.1;locus_tag=HMPREF2948_04005;product=ATP-dependent DNA helicase Rep;protein_id=OFQ19452.1;transl_table=11 KV814719.1 Genbank gene 178531 178624 . + . ID=gene-HMPREF2948_04010;Name=HMPREF2948_04010;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04010 KV814719.1 tRNAscan-SE tRNA 178531 178624 . + . ID=rna-HMPREF2948_04010;Parent=gene-HMPREF2948_04010;anticodon=(pos:178566..178568);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04010;product=tRNA-Ser KV814719.1 tRNAscan-SE exon 178531 178624 . + . ID=exon-HMPREF2948_04010-1;Parent=rna-HMPREF2948_04010;anticodon=(pos:178566..178568);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04010;product=tRNA-Ser KV814719.1 Genbank gene 178648 178724 . + . ID=gene-HMPREF2948_04015;Name=HMPREF2948_04015;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04015 KV814719.1 tRNAscan-SE tRNA 178648 178724 . + . ID=rna-HMPREF2948_04015;Parent=gene-HMPREF2948_04015;anticodon=(pos:178682..178684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04015;product=tRNA-Arg KV814719.1 tRNAscan-SE exon 178648 178724 . + . ID=exon-HMPREF2948_04015-1;Parent=rna-HMPREF2948_04015;anticodon=(pos:178682..178684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04015;product=tRNA-Arg KV814719.1 Genbank gene 178778 178854 . + . ID=gene-HMPREF2948_04020;Name=HMPREF2948_04020;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04020 KV814719.1 tRNAscan-SE tRNA 178778 178854 . + . ID=rna-HMPREF2948_04020;Parent=gene-HMPREF2948_04020;anticodon=(pos:178812..178814);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04020;product=tRNA-Arg KV814719.1 tRNAscan-SE exon 178778 178854 . + . ID=exon-HMPREF2948_04020-1;Parent=rna-HMPREF2948_04020;anticodon=(pos:178812..178814);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04020;product=tRNA-Arg KV814719.1 Genbank gene 178907 179587 . - . ID=gene-HMPREF2948_04025;Name=HMPREF2948_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04025 KV814719.1 Protein Homology CDS 178907 179587 . - 0 ID=cds-OFQ19453.1;Parent=gene-HMPREF2948_04025;Dbxref=NCBI_GP:OFQ19453.1;Name=OFQ19453.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640958.1;locus_tag=HMPREF2948_04025;product=hypothetical protein;protein_id=OFQ19453.1;transl_table=11 KV814719.1 Genbank pseudogene 179589 180698 . - . ID=gene-HMPREF2948_04030;Name=HMPREF2948_04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04030;pseudo=true KV814719.1 Protein Homology CDS 179589 180698 . - 0 ID=cds-HMPREF2948_04030;Parent=gene-HMPREF2948_04030;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005724008.1;locus_tag=HMPREF2948_04030;product=bifunctional NAD biosynthesis protein NadR;pseudo=true;transl_table=11 KV814719.1 cmsearch binding_site 180826 181000 . + . ID=id-KV814719.1:180826..181000;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV814719.1 Genbank gene 181089 181736 . + . ID=gene-HMPREF2948_04035;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=HMPREF2948_04035 KV814719.1 Protein Homology CDS 181089 181736 . + 0 ID=cds-OFQ19454.1;Parent=gene-HMPREF2948_04035;Dbxref=NCBI_GP:OFQ19454.1;Name=OFQ19454.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064365.1;locus_tag=HMPREF2948_04035;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=OFQ19454.1;transl_table=11 KV814719.1 Genbank gene 181807 182793 . - . ID=gene-HMPREF2948_04040;Name=HMPREF2948_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04040 KV814719.1 Protein Homology CDS 181807 182793 . - 0 ID=cds-OFQ19455.1;Parent=gene-HMPREF2948_04040;Dbxref=NCBI_GP:OFQ19455.1;Name=OFQ19455.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064364.1;locus_tag=HMPREF2948_04040;product=tRNA-dihydrouridine synthase A;protein_id=OFQ19455.1;transl_table=11 KV814719.1 Genbank gene 182797 184182 . - . ID=gene-HMPREF2948_04045;Name=HMPREF2948_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04045 KV814719.1 Protein Homology CDS 182797 184182 . - 0 ID=cds-OFQ19456.1;Parent=gene-HMPREF2948_04045;Dbxref=NCBI_GP:OFQ19456.1;Name=OFQ19456.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694818.1;locus_tag=HMPREF2948_04045;product=chloride channel protein EriC;protein_id=OFQ19456.1;transl_table=11 KV814719.1 Genbank gene 184441 184815 . + . ID=gene-HMPREF2948_04050;Name=HMPREF2948_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04050 KV814719.1 Protein Homology CDS 184441 184815 . + 0 ID=cds-OFQ19457.1;Parent=gene-HMPREF2948_04050;Dbxref=NCBI_GP:OFQ19457.1;Name=OFQ19457.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A0KQ98.1;locus_tag=HMPREF2948_04050;product=30S ribosomal protein S12;protein_id=OFQ19457.1;transl_table=11 KV814719.1 Genbank gene 184962 185432 . + . ID=gene-HMPREF2948_04055;Name=HMPREF2948_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04055 KV814719.1 Protein Homology CDS 184962 185432 . + 0 ID=cds-OFQ19458.1;Parent=gene-HMPREF2948_04055;Dbxref=NCBI_GP:OFQ19458.1;Name=OFQ19458.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=HMPREF2948_04055;product=30S ribosomal protein S7;protein_id=OFQ19458.1;transl_table=11 KV814719.1 Genbank gene 185517 187619 . + . ID=gene-HMPREF2948_04060;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=HMPREF2948_04060 KV814719.1 Protein Homology CDS 185517 187619 . + 0 ID=cds-OFQ19459.1;Parent=gene-HMPREF2948_04060;Dbxref=NCBI_GP:OFQ19459.1;Name=OFQ19459.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_020455498.1;locus_tag=HMPREF2948_04060;product=elongation factor G;protein_id=OFQ19459.1;transl_table=11 ##sequence-region KV814720.1 1 1247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814720.1 Genbank region 1 1247 . + . ID=KV814720.1:1..1247;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814720.1 Genbank gene 61 1245 . - . ID=gene-HMPREF2948_04065;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=HMPREF2948_04065 KV814720.1 Protein Homology CDS 61 1245 . - 0 ID=cds-OFQ19236.1;Parent=gene-HMPREF2948_04065;Dbxref=NCBI_GP:OFQ19236.1;Name=OFQ19236.1;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu;gbkey=CDS;gene=tuf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667564.1;locus_tag=HMPREF2948_04065;product=elongation factor Tu;protein_id=OFQ19236.1;transl_table=11 ##sequence-region KV814721.1 1 302 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814721.1 Genbank region 1 302 . + . ID=KV814721.1:1..302;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814721.1 Genbank pseudogene 1 302 . + . ID=gene-HMPREF2948_04070;Name=HMPREF2948_04070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04070;pseudo=true KV814721.1 Protein Homology CDS 1 302 . + 0 ID=cds-HMPREF2948_04070;Parent=gene-HMPREF2948_04070;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655581.1;locus_tag=HMPREF2948_04070;product=transposase;pseudo=true;transl_table=11 ##sequence-region KV814722.1 1 359 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814722.1 Genbank region 1 359 . + . ID=KV814722.1:1..359;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 ##sequence-region KV814723.1 1 225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814723.1 Genbank region 1 225 . + . ID=KV814723.1:1..225;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814723.1 Genbank gene 95 170 . + . ID=gene-HMPREF2948_04075;Name=HMPREF2948_04075;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04075 KV814723.1 tRNAscan-SE tRNA 95 170 . + . ID=rna-HMPREF2948_04075;Parent=gene-HMPREF2948_04075;anticodon=(pos:129..131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04075;product=tRNA-Glu KV814723.1 tRNAscan-SE exon 95 170 . + . ID=exon-HMPREF2948_04075-1;Parent=rna-HMPREF2948_04075;anticodon=(pos:129..131);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04075;product=tRNA-Glu ##sequence-region KV814724.1 1 10423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814724.1 Genbank region 1 10423 . + . ID=KV814724.1:1..10423;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814724.1 Genbank pseudogene 1 216 . + . ID=gene-HMPREF2948_04080;Name=HMPREF2948_04080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04080;pseudo=true KV814724.1 GeneMarkS+ CDS 1 216 . + 0 ID=cds-HMPREF2948_04080;Parent=gene-HMPREF2948_04080;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04080;product=hypothetical protein;pseudo=true;transl_table=11 KV814724.1 Genbank gene 244 1023 . + . ID=gene-HMPREF2948_04085;Name=HMPREF2948_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04085 KV814724.1 Protein Homology CDS 244 1023 . + 0 ID=cds-OFQ19058.1;Parent=gene-HMPREF2948_04085;Dbxref=NCBI_GP:OFQ19058.1;Name=OFQ19058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43963.1;locus_tag=HMPREF2948_04085;product=hypothetical protein;protein_id=OFQ19058.1;transl_table=11 KV814724.1 Genbank gene 1048 2859 . + . ID=gene-HMPREF2948_04090;Name=HMPREF2948_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04090 KV814724.1 Protein Homology CDS 1048 2859 . + 0 ID=cds-OFQ19059.1;Parent=gene-HMPREF2948_04090;Dbxref=NCBI_GP:OFQ19059.1;Name=OFQ19059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996272.1;locus_tag=HMPREF2948_04090;product=NAD nucleotidase;protein_id=OFQ19059.1;transl_table=11 KV814724.1 Genbank pseudogene 3259 3546 . + . ID=gene-HMPREF2948_04095;Name=HMPREF2948_04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04095;pseudo=true KV814724.1 Protein Homology CDS 3259 3546 . + 0 ID=cds-HMPREF2948_04095;Parent=gene-HMPREF2948_04095;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634047.1;locus_tag=HMPREF2948_04095;product=peroxiredoxin;pseudo=true;transl_table=11 KV814724.1 Genbank gene 3802 5829 . + . ID=gene-HMPREF2948_04100;Name=HMPREF2948_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04100 KV814724.1 Protein Homology CDS 3802 5829 . + 0 ID=cds-OFQ19060.1;Parent=gene-HMPREF2948_04100;Dbxref=NCBI_GP:OFQ19060.1;Name=OFQ19060.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995786.1;locus_tag=HMPREF2948_04100;product=transporter;protein_id=OFQ19060.1;transl_table=11 KV814724.1 Genbank gene 5959 6189 . + . ID=gene-HMPREF2948_04105;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=HMPREF2948_04105 KV814724.1 Protein Homology CDS 5959 6189 . + 0 ID=cds-OFQ19061.1;Parent=gene-HMPREF2948_04105;Dbxref=NCBI_GP:OFQ19061.1;Name=OFQ19061.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016959503.1;locus_tag=HMPREF2948_04105;product=preprotein translocase subunit SecA;protein_id=OFQ19061.1;transl_table=11 KV814724.1 Genbank gene 6192 6797 . + . ID=gene-HMPREF2948_04110;Name=HMPREF2948_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04110 KV814724.1 Protein Homology CDS 6192 6797 . + 0 ID=cds-OFQ19062.1;Parent=gene-HMPREF2948_04110;Dbxref=NCBI_GP:OFQ19062.1;Name=OFQ19062.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064146.1;locus_tag=HMPREF2948_04110;product=sec-independent translocase;protein_id=OFQ19062.1;transl_table=11 KV814724.1 Genbank gene 6807 7601 . + . ID=gene-HMPREF2948_04115;Name=HMPREF2948_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04115 KV814724.1 Protein Homology CDS 6807 7601 . + 0 ID=cds-OFQ19063.1;Parent=gene-HMPREF2948_04115;Dbxref=NCBI_GP:OFQ19063.1;Name=OFQ19063.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064145.1;locus_tag=HMPREF2948_04115;product=twin-arginine protein translocation system subunit TatC;protein_id=OFQ19063.1;transl_table=11 KV814724.1 Genbank gene 7658 8680 . + . ID=gene-HMPREF2948_04120;Name=HMPREF2948_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04120 KV814724.1 Protein Homology CDS 7658 8680 . + 0 ID=cds-OFQ19064.1;Parent=gene-HMPREF2948_04120;Dbxref=NCBI_GP:OFQ19064.1;Name=OFQ19064.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064144.1;locus_tag=HMPREF2948_04120;product=delta-aminolevulinic acid dehydratase;protein_id=OFQ19064.1;transl_table=11 KV814724.1 Genbank gene 8914 10263 . + . ID=gene-HMPREF2948_04125;Name=HMPREF2948_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04125 KV814724.1 Protein Homology CDS 8914 10263 . + 0 ID=cds-OFQ19065.1;Parent=gene-HMPREF2948_04125;Dbxref=NCBI_GP:OFQ19065.1;Name=OFQ19065.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630640.1;locus_tag=HMPREF2948_04125;product=glutamate dehydrogenase;protein_id=OFQ19065.1;transl_table=11 ##sequence-region KV814725.1 1 216796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814725.1 Genbank region 1 216796 . + . ID=KV814725.1:1..216796;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814725.1 Genbank gene 116 3052 . - . ID=gene-HMPREF2948_04130;Name=HMPREF2948_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04130 KV814725.1 Protein Homology CDS 116 3052 . - 0 ID=cds-OFQ18980.1;Parent=gene-HMPREF2948_04130;Dbxref=NCBI_GP:OFQ18980.1;Name=OFQ18980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766765.1;locus_tag=HMPREF2948_04130;product=bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase;protein_id=OFQ18980.1;transl_table=11 KV814725.1 Genbank gene 3053 4006 . - . ID=gene-HMPREF2948_04135;Name=HMPREF2948_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04135 KV814725.1 Protein Homology CDS 3053 4006 . - 0 ID=cds-OFQ18981.1;Parent=gene-HMPREF2948_04135;Dbxref=NCBI_GP:OFQ18981.1;Name=OFQ18981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065703.1;locus_tag=HMPREF2948_04135;product=tRNA dimethylallyltransferase;protein_id=OFQ18981.1;transl_table=11 KV814725.1 Genbank gene 4008 5852 . - . ID=gene-HMPREF2948_04140;Name=HMPREF2948_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04140 KV814725.1 Protein Homology CDS 4008 5852 . - 0 ID=cds-OFQ18982.1;Parent=gene-HMPREF2948_04140;Dbxref=NCBI_GP:OFQ18982.1;Name=OFQ18982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH7.1;locus_tag=HMPREF2948_04140;product=DNA mismatch repair protein MutL;protein_id=OFQ18982.1;transl_table=11 KV814725.1 Genbank gene 5861 7474 . - . ID=gene-HMPREF2948_04145;Name=HMPREF2948_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04145 KV814725.1 Protein Homology CDS 5861 7474 . - 0 ID=cds-OFQ18983.1;Parent=gene-HMPREF2948_04145;Dbxref=NCBI_GP:OFQ18983.1;Name=OFQ18983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065701.1;locus_tag=HMPREF2948_04145;product=N-acetylmuramoyl-L-alanine amidase;protein_id=OFQ18983.1;transl_table=11 KV814725.1 Genbank gene 7486 7956 . - . ID=gene-HMPREF2948_04150;Name=HMPREF2948_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04150 KV814725.1 Protein Homology CDS 7486 7956 . - 0 ID=cds-OFQ18984.1;Parent=gene-HMPREF2948_04150;Dbxref=NCBI_GP:OFQ18984.1;Name=OFQ18984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695630.1;locus_tag=HMPREF2948_04150;product=tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;protein_id=OFQ18984.1;transl_table=11 KV814725.1 Genbank gene 8072 8147 . - . ID=gene-HMPREF2948_04155;Name=HMPREF2948_04155;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04155 KV814725.1 tRNAscan-SE tRNA 8072 8147 . - . ID=rna-HMPREF2948_04155;Parent=gene-HMPREF2948_04155;anticodon=(pos:complement(8112..8114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04155;product=tRNA-Gly KV814725.1 tRNAscan-SE exon 8072 8147 . - . ID=exon-HMPREF2948_04155-1;Parent=rna-HMPREF2948_04155;anticodon=(pos:complement(8112..8114));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04155;product=tRNA-Gly KV814725.1 Genbank gene 8241 8789 . - . ID=gene-HMPREF2948_04160;Name=HMPREF2948_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04160 KV814725.1 Protein Homology CDS 8241 8789 . - 0 ID=cds-OFQ18985.1;Parent=gene-HMPREF2948_04160;Dbxref=NCBI_GP:OFQ18985.1;Name=OFQ18985.1;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698206.1;locus_tag=HMPREF2948_04160;product=oligoribonuclease;protein_id=OFQ18985.1;transl_table=11 KV814725.1 Genbank gene 8866 9903 . + . ID=gene-HMPREF2948_04165;Name=HMPREF2948_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04165 KV814725.1 Protein Homology CDS 8866 9903 . + 0 ID=cds-OFQ18986.1;Parent=gene-HMPREF2948_04165;Dbxref=NCBI_GP:OFQ18986.1;Name=OFQ18986.1;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694198.1;locus_tag=HMPREF2948_04165;product=ribosome small subunit-dependent GTPase;protein_id=OFQ18986.1;transl_table=11 KV814725.1 Genbank gene 10056 10313 . + . ID=gene-HMPREF2948_04170;Name=HMPREF2948_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04170 KV814725.1 Protein Homology CDS 10056 10313 . + 0 ID=cds-OFQ18987.1;Parent=gene-HMPREF2948_04170;Dbxref=NCBI_GP:OFQ18987.1;Name=OFQ18987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=HMPREF2948_04170;product=PTS sugar transporter;protein_id=OFQ18987.1;transl_table=11 KV814725.1 Genbank gene 10393 12120 . + . ID=gene-HMPREF2948_04175;Name=HMPREF2948_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04175 KV814725.1 Protein Homology CDS 10393 12120 . + 0 ID=cds-OFQ18988.1;Parent=gene-HMPREF2948_04175;Dbxref=NCBI_GP:OFQ18988.1;Name=OFQ18988.1;Note=Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005555952.1;locus_tag=HMPREF2948_04175;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=OFQ18988.1;transl_table=11 KV814725.1 Genbank gene 12180 12680 . + . ID=gene-HMPREF2948_04180;Name=HMPREF2948_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04180 KV814725.1 Protein Homology CDS 12180 12680 . + 0 ID=cds-OFQ18989.1;Parent=gene-HMPREF2948_04180;Dbxref=NCBI_GP:OFQ18989.1;Name=OFQ18989.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011200681.1;locus_tag=HMPREF2948_04180;product=PTS glucose transporter subunit IIA;protein_id=OFQ18989.1;transl_table=11 KV814725.1 Genbank gene 12755 13954 . + . ID=gene-HMPREF2948_04185;Name=HMPREF2948_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04185 KV814725.1 Protein Homology CDS 12755 13954 . + 0 ID=cds-OFQ18990.1;Parent=gene-HMPREF2948_04185;Dbxref=NCBI_GP:OFQ18990.1;Name=OFQ18990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698213.1;locus_tag=HMPREF2948_04185;product=mannose-6-phosphate isomerase;protein_id=OFQ18990.1;transl_table=11 KV814725.1 Genbank gene 14075 17101 . + . ID=gene-HMPREF2948_04190;Name=HMPREF2948_04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04190 KV814725.1 Protein Homology CDS 14075 17101 . + 0 ID=cds-OFQ18991.1;Parent=gene-HMPREF2948_04190;Dbxref=NCBI_GP:OFQ18991.1;Name=OFQ18991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065695.1;locus_tag=HMPREF2948_04190;product=beta-galactosidase;protein_id=OFQ18991.1;transl_table=11 KV814725.1 Genbank gene 17158 17421 . - . ID=gene-HMPREF2948_04195;Name=HMPREF2948_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04195 KV814725.1 Protein Homology CDS 17158 17421 . - 0 ID=cds-OFQ18992.1;Parent=gene-HMPREF2948_04195;Dbxref=NCBI_GP:OFQ18992.1;Name=OFQ18992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005716684.1;locus_tag=HMPREF2948_04195;product=glutaredoxin;protein_id=OFQ18992.1;transl_table=11 KV814725.1 Genbank gene 17553 18452 . + . ID=gene-HMPREF2948_04200;Name=HMPREF2948_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04200 KV814725.1 Protein Homology CDS 17553 18452 . + 0 ID=cds-OFQ18993.1;Parent=gene-HMPREF2948_04200;Dbxref=NCBI_GP:OFQ18993.1;Name=OFQ18993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I2X8.1;locus_tag=HMPREF2948_04200;product=ribosomal protein S6 modification protein;protein_id=OFQ18993.1;transl_table=11 KV814725.1 Genbank gene 18491 19093 . - . ID=gene-HMPREF2948_04205;Name=HMPREF2948_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04205 KV814725.1 Protein Homology CDS 18491 19093 . - 0 ID=cds-OFQ19044.1;Parent=gene-HMPREF2948_04205;Dbxref=NCBI_GP:OFQ19044.1;Name=OFQ19044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650560.1;locus_tag=HMPREF2948_04205;product=hypothetical protein;protein_id=OFQ19044.1;transl_table=11 KV814725.1 Genbank gene 19205 20599 . - . ID=gene-HMPREF2948_04210;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=HMPREF2948_04210 KV814725.1 Protein Homology CDS 19205 20599 . - 0 ID=cds-OFQ18994.1;Parent=gene-HMPREF2948_04210;Dbxref=NCBI_GP:OFQ18994.1;Name=OFQ18994.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567406.1;locus_tag=HMPREF2948_04210;product=class II fumarate hydratase;protein_id=OFQ18994.1;transl_table=11 KV814725.1 Genbank gene 20838 21269 . + . ID=gene-HMPREF2948_04215;Name=HMPREF2948_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04215 KV814725.1 Protein Homology CDS 20838 21269 . + 0 ID=cds-OFQ18995.1;Parent=gene-HMPREF2948_04215;Dbxref=NCBI_GP:OFQ18995.1;Name=OFQ18995.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005716675.1;locus_tag=HMPREF2948_04215;product=DNA polymerase III subunit chi;protein_id=OFQ18995.1;transl_table=11 KV814725.1 Genbank gene 21343 21651 . + . ID=gene-HMPREF2948_04220;Name=HMPREF2948_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04220 KV814725.1 Protein Homology CDS 21343 21651 . + 0 ID=cds-OFQ18996.1;Parent=gene-HMPREF2948_04220;Dbxref=NCBI_GP:OFQ18996.1;Name=OFQ18996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636604.1;locus_tag=HMPREF2948_04220;product=ASCH domain-containing protein;protein_id=OFQ18996.1;transl_table=11 KV814725.1 Genbank gene 21661 22101 . + . ID=gene-HMPREF2948_04225;Name=HMPREF2948_04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04225 KV814725.1 GeneMarkS+ CDS 21661 22101 . + 0 ID=cds-OFQ18997.1;Parent=gene-HMPREF2948_04225;Dbxref=NCBI_GP:OFQ18997.1;Name=OFQ18997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04225;product=hypothetical protein;protein_id=OFQ18997.1;transl_table=11 KV814725.1 Genbank gene 22122 22349 . + . ID=gene-HMPREF2948_04230;Name=HMPREF2948_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04230 KV814725.1 GeneMarkS+ CDS 22122 22349 . + 0 ID=cds-OFQ18998.1;Parent=gene-HMPREF2948_04230;Dbxref=NCBI_GP:OFQ18998.1;Name=OFQ18998.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04230;product=hypothetical protein;protein_id=OFQ18998.1;transl_table=11 KV814725.1 Genbank gene 22432 25296 . + . ID=gene-HMPREF2948_04235;Name=HMPREF2948_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04235 KV814725.1 Protein Homology CDS 22432 25296 . + 0 ID=cds-OFQ18999.1;Parent=gene-HMPREF2948_04235;Dbxref=NCBI_GP:OFQ18999.1;Name=OFQ18999.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693970.1;locus_tag=HMPREF2948_04235;product=valine--tRNA ligase;protein_id=OFQ18999.1;transl_table=11 KV814725.1 Genbank gene 25379 28456 . - . ID=gene-HMPREF2948_04240;Name=HMPREF2948_04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04240 KV814725.1 Protein Homology CDS 25379 28456 . - 0 ID=cds-OFQ19000.1;Parent=gene-HMPREF2948_04240;Dbxref=NCBI_GP:OFQ19000.1;Name=OFQ19000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695651.1;locus_tag=HMPREF2948_04240;product=hypothetical protein;protein_id=OFQ19000.1;transl_table=11 KV814725.1 Genbank gene 28857 29951 . + . ID=gene-HMPREF2948_04245;Name=HMPREF2948_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04245 KV814725.1 Protein Homology CDS 28857 29951 . + 0 ID=cds-OFQ19001.1;Parent=gene-HMPREF2948_04245;Dbxref=NCBI_GP:OFQ19001.1;Name=OFQ19001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P38368.1;locus_tag=HMPREF2948_04245;product=hypothetical protein;protein_id=OFQ19001.1;transl_table=11 KV814725.1 Genbank gene 30054 30635 . + . ID=gene-HMPREF2948_04250;Name=HMPREF2948_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04250 KV814725.1 Protein Homology CDS 30054 30635 . + 0 ID=cds-OFQ19002.1;Parent=gene-HMPREF2948_04250;Dbxref=NCBI_GP:OFQ19002.1;Name=OFQ19002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005756863.1;locus_tag=HMPREF2948_04250;product=LemA family protein;protein_id=OFQ19002.1;transl_table=11 KV814725.1 Genbank gene 30645 31094 . + . ID=gene-HMPREF2948_04255;Name=HMPREF2948_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04255 KV814725.1 Protein Homology CDS 30645 31094 . + 0 ID=cds-OFQ19003.1;Parent=gene-HMPREF2948_04255;Dbxref=NCBI_GP:OFQ19003.1;Name=OFQ19003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005756861.1;locus_tag=HMPREF2948_04255;product=hypothetical protein;protein_id=OFQ19003.1;transl_table=11 KV814725.1 Genbank gene 31087 31887 . + . ID=gene-HMPREF2948_04260;Name=HMPREF2948_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04260 KV814725.1 Protein Homology CDS 31087 31887 . + 0 ID=cds-OFQ19004.1;Parent=gene-HMPREF2948_04260;Dbxref=NCBI_GP:OFQ19004.1;Name=OFQ19004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065675.1;locus_tag=HMPREF2948_04260;product=methanol dehydrogenase;protein_id=OFQ19004.1;transl_table=11 KV814725.1 Genbank gene 31963 32289 . + . ID=gene-HMPREF2948_04265;Name=HMPREF2948_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04265 KV814725.1 Protein Homology CDS 31963 32289 . + 0 ID=cds-OFQ19005.1;Parent=gene-HMPREF2948_04265;Dbxref=NCBI_GP:OFQ19005.1;Name=OFQ19005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695656.1;locus_tag=HMPREF2948_04265;product=glutaredoxin;protein_id=OFQ19005.1;transl_table=11 KV814725.1 cmsearch binding_site 32434 32526 . + . ID=id-KV814725.1:32434..32526;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV814725.1 Genbank gene 32562 33560 . + . ID=gene-HMPREF2948_04270;Name=HMPREF2948_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04270 KV814725.1 Protein Homology CDS 32562 33560 . + 0 ID=cds-OFQ19006.1;Parent=gene-HMPREF2948_04270;Dbxref=NCBI_GP:OFQ19006.1;Name=OFQ19006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011609167.1;locus_tag=HMPREF2948_04270;product=thiamine ABC transporter substrate-binding protein;protein_id=OFQ19006.1;transl_table=11 KV814725.1 Genbank gene 33566 35170 . + . ID=gene-HMPREF2948_04275;Name=HMPREF2948_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04275 KV814725.1 Protein Homology CDS 33566 35170 . + 0 ID=cds-OFQ19007.1;Parent=gene-HMPREF2948_04275;Dbxref=NCBI_GP:OFQ19007.1;Name=OFQ19007.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699393.1;locus_tag=HMPREF2948_04275;product=thiamine ABC transporter permease;protein_id=OFQ19007.1;transl_table=11 KV814725.1 Genbank gene 35163 35792 . + . ID=gene-HMPREF2948_04280;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=HMPREF2948_04280 KV814725.1 Protein Homology CDS 35163 35792 . + 0 ID=cds-OFQ19008.1;Parent=gene-HMPREF2948_04280;Dbxref=NCBI_GP:OFQ19008.1;Name=OFQ19008.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065672.1;locus_tag=HMPREF2948_04280;product=thiamine ABC transporter ATP-binding protein;protein_id=OFQ19008.1;transl_table=11 KV814725.1 Genbank gene 35866 36882 . + . ID=gene-HMPREF2948_04285;Name=HMPREF2948_04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04285 KV814725.1 Protein Homology CDS 35866 36882 . + 0 ID=cds-OFQ19009.1;Parent=gene-HMPREF2948_04285;Dbxref=NCBI_GP:OFQ19009.1;Name=OFQ19009.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VNF1.1;locus_tag=HMPREF2948_04285;product=biotin synthase BioB;protein_id=OFQ19009.1;transl_table=11 KV814725.1 Genbank gene 36927 37727 . - . ID=gene-HMPREF2948_04290;Name=HMPREF2948_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04290 KV814725.1 Protein Homology CDS 36927 37727 . - 0 ID=cds-OFQ19010.1;Parent=gene-HMPREF2948_04290;Dbxref=NCBI_GP:OFQ19010.1;Name=OFQ19010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005756154.1;locus_tag=HMPREF2948_04290;product=inositol monophosphatase;protein_id=OFQ19010.1;transl_table=11 KV814725.1 Genbank gene 37928 38446 . + . ID=gene-HMPREF2948_04295;Name=HMPREF2948_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04295 KV814725.1 Protein Homology CDS 37928 38446 . + 0 ID=cds-OFQ19011.1;Parent=gene-HMPREF2948_04295;Dbxref=NCBI_GP:OFQ19011.1;Name=OFQ19011.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698235.1;locus_tag=HMPREF2948_04295;product=hypothetical protein;protein_id=OFQ19011.1;transl_table=11 KV814725.1 Genbank gene 38434 39159 . + . ID=gene-HMPREF2948_04300;Name=HMPREF2948_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04300 KV814725.1 Protein Homology CDS 38434 39159 . + 0 ID=cds-OFQ19012.1;Parent=gene-HMPREF2948_04300;Dbxref=NCBI_GP:OFQ19012.1;Name=OFQ19012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695665.1;locus_tag=HMPREF2948_04300;product=hypothetical protein;protein_id=OFQ19012.1;transl_table=11 KV814725.1 Genbank gene 39156 39842 . + . ID=gene-HMPREF2948_04305;Name=HMPREF2948_04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04305 KV814725.1 Protein Homology CDS 39156 39842 . + 0 ID=cds-OFQ19013.1;Parent=gene-HMPREF2948_04305;Dbxref=NCBI_GP:OFQ19013.1;Name=OFQ19013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695666.1;locus_tag=HMPREF2948_04305;product=hypothetical protein;protein_id=OFQ19013.1;transl_table=11 KV814725.1 Genbank gene 39835 40122 . + . ID=gene-HMPREF2948_04310;Name=HMPREF2948_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04310 KV814725.1 Protein Homology CDS 39835 40122 . + 0 ID=cds-OFQ19045.1;Parent=gene-HMPREF2948_04310;Dbxref=NCBI_GP:OFQ19045.1;Name=OFQ19045.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648029.1;locus_tag=HMPREF2948_04310;product=hypothetical protein;protein_id=OFQ19045.1;transl_table=11 KV814725.1 Genbank gene 40160 43519 . + . ID=gene-HMPREF2948_04315;Name=HMPREF2948_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04315 KV814725.1 Protein Homology CDS 40160 43519 . + 0 ID=cds-OFQ19014.1;Parent=gene-HMPREF2948_04315;Dbxref=NCBI_GP:OFQ19014.1;Name=OFQ19014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699461.1;locus_tag=HMPREF2948_04315;product=exodeoxyribonuclease V subunit gamma;protein_id=OFQ19014.1;transl_table=11 KV814725.1 Genbank gene 43597 44046 . + . ID=gene-HMPREF2948_04320;Name=HMPREF2948_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04320 KV814725.1 Protein Homology CDS 43597 44046 . + 0 ID=cds-OFQ19015.1;Parent=gene-HMPREF2948_04320;Dbxref=NCBI_GP:OFQ19015.1;Name=OFQ19015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648026.1;locus_tag=HMPREF2948_04320;product=transcriptional regulator NrdR;protein_id=OFQ19015.1;transl_table=11 KV814725.1 Genbank gene 44048 45178 . + . ID=gene-HMPREF2948_04325;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=HMPREF2948_04325 KV814725.1 Protein Homology CDS 44048 45178 . + 0 ID=cds-OFQ19016.1;Parent=gene-HMPREF2948_04325;Dbxref=NCBI_GP:OFQ19016.1;Name=OFQ19016.1;Note=riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil;gbkey=CDS;gene=ribD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698233.1;locus_tag=HMPREF2948_04325;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=OFQ19016.1;transl_table=11 KV814725.1 Genbank gene 45182 46204 . + . ID=gene-HMPREF2948_04330;Name=HMPREF2948_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04330 KV814725.1 Protein Homology CDS 45182 46204 . + 0 ID=cds-OFQ19017.1;Parent=gene-HMPREF2948_04330;Dbxref=NCBI_GP:OFQ19017.1;Name=OFQ19017.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651554.1;locus_tag=HMPREF2948_04330;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=OFQ19017.1;transl_table=11 KV814725.1 Genbank gene 46211 46807 . + . ID=gene-HMPREF2948_04335;Name=HMPREF2948_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04335 KV814725.1 Protein Homology CDS 46211 46807 . + 0 ID=cds-OFQ19018.1;Parent=gene-HMPREF2948_04335;Dbxref=NCBI_GP:OFQ19018.1;Name=OFQ19018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771599.1;locus_tag=HMPREF2948_04335;product=5'-deoxynucleotidase;protein_id=OFQ19018.1;transl_table=11 KV814725.1 Genbank gene 46858 47625 . - . ID=gene-HMPREF2948_04340;Name=HMPREF2948_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04340 KV814725.1 Protein Homology CDS 46858 47625 . - 0 ID=cds-OFQ19019.1;Parent=gene-HMPREF2948_04340;Dbxref=NCBI_GP:OFQ19019.1;Name=OFQ19019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698264.1;locus_tag=HMPREF2948_04340;product=molybdenum-dependent transcriptional regulator;protein_id=OFQ19019.1;transl_table=11 KV814725.1 Genbank gene 47763 48524 . + . ID=gene-HMPREF2948_04345;Name=HMPREF2948_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04345 KV814725.1 Protein Homology CDS 47763 48524 . + 0 ID=cds-OFQ19020.1;Parent=gene-HMPREF2948_04345;Dbxref=NCBI_GP:OFQ19020.1;Name=OFQ19020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698243.1;locus_tag=HMPREF2948_04345;product=molybdate ABC transporter substrate-binding protein;protein_id=OFQ19020.1;transl_table=11 KV814725.1 Genbank gene 48645 49334 . + . ID=gene-HMPREF2948_04350;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=HMPREF2948_04350 KV814725.1 Protein Homology CDS 48645 49334 . + 0 ID=cds-OFQ19046.1;Parent=gene-HMPREF2948_04350;Dbxref=NCBI_GP:OFQ19046.1;Name=OFQ19046.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;inference=EXISTENCE: similar to AA sequence:SwissProt:P45322.1;locus_tag=HMPREF2948_04350;product=molybdate ABC transporter permease;protein_id=OFQ19046.1;transl_table=11 KV814725.1 Genbank gene 49321 50376 . + . ID=gene-HMPREF2948_04355;Name=HMPREF2948_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04355 KV814725.1 Protein Homology CDS 49321 50376 . + 0 ID=cds-OFQ19021.1;Parent=gene-HMPREF2948_04355;Dbxref=NCBI_GP:OFQ19021.1;Name=OFQ19021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694180.1;locus_tag=HMPREF2948_04355;product=molybdenum ABC transporter ATP-binding protein;protein_id=OFQ19021.1;transl_table=11 KV814725.1 Genbank gene 50451 51587 . - . ID=gene-HMPREF2948_04360;Name=HMPREF2948_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04360 KV814725.1 Protein Homology CDS 50451 51587 . - 0 ID=cds-OFQ19022.1;Parent=gene-HMPREF2948_04360;Dbxref=NCBI_GP:OFQ19022.1;Name=OFQ19022.1;Note=chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CMS2.1;locus_tag=HMPREF2948_04360;product=molecular chaperone DnaJ;protein_id=OFQ19022.1;transl_table=11 KV814725.1 Genbank gene 51650 52054 . - . ID=gene-HMPREF2948_04365;Name=HMPREF2948_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04365 KV814725.1 Protein Homology CDS 51650 52054 . - 0 ID=cds-OFQ19023.1;Parent=gene-HMPREF2948_04365;Dbxref=NCBI_GP:OFQ19023.1;Name=OFQ19023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526046.1;locus_tag=HMPREF2948_04365;product=transcriptional regulator;protein_id=OFQ19023.1;transl_table=11 KV814725.1 Genbank gene 52196 54094 . - . ID=gene-HMPREF2948_04370;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=HMPREF2948_04370 KV814725.1 Protein Homology CDS 52196 54094 . - 0 ID=cds-OFQ19024.1;Parent=gene-HMPREF2948_04370;Dbxref=NCBI_GP:OFQ19024.1;Name=OFQ19024.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694297.1;locus_tag=HMPREF2948_04370;product=molecular chaperone DnaK;protein_id=OFQ19024.1;transl_table=11 KV814725.1 Genbank gene 54365 55861 . + . ID=gene-HMPREF2948_04375;Name=HMPREF2948_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04375 KV814725.1 Protein Homology CDS 54365 55861 . + 0 ID=cds-OFQ19025.1;Parent=gene-HMPREF2948_04375;Dbxref=NCBI_GP:OFQ19025.1;Name=OFQ19025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065653.1;locus_tag=HMPREF2948_04375;product=hypothetical protein;protein_id=OFQ19025.1;transl_table=11 KV814725.1 Genbank gene 55917 56375 . - . ID=gene-HMPREF2948_04380;Name=HMPREF2948_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04380 KV814725.1 Protein Homology CDS 55917 56375 . - 0 ID=cds-OFQ19026.1;Parent=gene-HMPREF2948_04380;Dbxref=NCBI_GP:OFQ19026.1;Name=OFQ19026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698227.1;locus_tag=HMPREF2948_04380;product=methylglyoxal synthase;protein_id=OFQ19026.1;transl_table=11 KV814725.1 Genbank gene 56683 59349 . + . ID=gene-HMPREF2948_04385;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=HMPREF2948_04385 KV814725.1 Protein Homology CDS 56683 59349 . + 0 ID=cds-OFQ19027.1;Parent=gene-HMPREF2948_04385;Dbxref=NCBI_GP:OFQ19027.1;Name=OFQ19027.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524903.1;locus_tag=HMPREF2948_04385;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=OFQ19027.1;transl_table=11 KV814725.1 Genbank gene 59439 61331 . + . ID=gene-HMPREF2948_04390;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=HMPREF2948_04390 KV814725.1 Protein Homology CDS 59439 61331 . + 0 ID=cds-OFQ19028.1;Parent=gene-HMPREF2948_04390;Dbxref=NCBI_GP:OFQ19028.1;Name=OFQ19028.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005820989.1;locus_tag=HMPREF2948_04390;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=OFQ19028.1;transl_table=11 KV814725.1 Genbank gene 61423 62847 . + . ID=gene-HMPREF2948_04395;Name=HMPREF2948_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04395 KV814725.1 Protein Homology CDS 61423 62847 . + 0 ID=cds-OFQ19029.1;Parent=gene-HMPREF2948_04395;Dbxref=NCBI_GP:OFQ19029.1;Name=OFQ19029.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010945432.1;locus_tag=HMPREF2948_04395;product=dihydrolipoyl dehydrogenase;protein_id=OFQ19029.1;transl_table=11 KV814725.1 Genbank gene 63009 63560 . + . ID=gene-HMPREF2948_04400;Name=HMPREF2948_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04400 KV814725.1 Protein Homology CDS 63009 63560 . + 0 ID=cds-OFQ19030.1;Parent=gene-HMPREF2948_04400;Dbxref=NCBI_GP:OFQ19030.1;Name=OFQ19030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501015.1;locus_tag=HMPREF2948_04400;product=endopeptidase;protein_id=OFQ19030.1;transl_table=11 KV814725.1 Genbank gene 63639 64085 . - . ID=gene-HMPREF2948_04405;Name=HMPREF2948_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04405 KV814725.1 Protein Homology CDS 63639 64085 . - 0 ID=cds-OFQ19047.1;Parent=gene-HMPREF2948_04405;Dbxref=NCBI_GP:OFQ19047.1;Name=OFQ19047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641993.1;locus_tag=HMPREF2948_04405;product=type VI secretion protein ImpA;protein_id=OFQ19047.1;transl_table=11 KV814725.1 Genbank gene 64362 65603 . + . ID=gene-HMPREF2948_04410;Name=HMPREF2948_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04410 KV814725.1 Protein Homology CDS 64362 65603 . + 0 ID=cds-OFQ19031.1;Parent=gene-HMPREF2948_04410;Dbxref=NCBI_GP:OFQ19031.1;Name=OFQ19031.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698207.1;locus_tag=HMPREF2948_04410;product=serine/threonine transporter SstT;protein_id=OFQ19031.1;transl_table=11 KV814725.1 Genbank gene 65662 67110 . + . ID=gene-HMPREF2948_04415;Name=HMPREF2948_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04415 KV814725.1 Protein Homology CDS 65662 67110 . + 0 ID=cds-OFQ19032.1;Parent=gene-HMPREF2948_04415;Dbxref=NCBI_GP:OFQ19032.1;Name=OFQ19032.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065645.1;locus_tag=HMPREF2948_04415;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=OFQ19032.1;transl_table=11 KV814725.1 Genbank gene 67156 68070 . + . ID=gene-HMPREF2948_04420;Name=HMPREF2948_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04420 KV814725.1 Protein Homology CDS 67156 68070 . + 0 ID=cds-OFQ19033.1;Parent=gene-HMPREF2948_04420;Dbxref=NCBI_GP:OFQ19033.1;Name=OFQ19033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761933.1;locus_tag=HMPREF2948_04420;product=paraslipin;protein_id=OFQ19033.1;transl_table=11 KV814725.1 Genbank gene 68123 68578 . + . ID=gene-HMPREF2948_04425;Name=HMPREF2948_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04425 KV814725.1 Protein Homology CDS 68123 68578 . + 0 ID=cds-OFQ19034.1;Parent=gene-HMPREF2948_04425;Dbxref=NCBI_GP:OFQ19034.1;Name=OFQ19034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695696.1;locus_tag=HMPREF2948_04425;product=hypothetical protein;protein_id=OFQ19034.1;transl_table=11 KV814725.1 Genbank gene 68575 69180 . + . ID=gene-HMPREF2948_04430;Name=HMPREF2948_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04430 KV814725.1 Protein Homology CDS 68575 69180 . + 0 ID=cds-OFQ19035.1;Parent=gene-HMPREF2948_04430;Dbxref=NCBI_GP:OFQ19035.1;Name=OFQ19035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695697.1;locus_tag=HMPREF2948_04430;product=NAD(P)H oxidoreductase;protein_id=OFQ19035.1;transl_table=11 KV814725.1 Genbank gene 69204 69761 . + . ID=gene-HMPREF2948_04435;Name=HMPREF2948_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04435 KV814725.1 Protein Homology CDS 69204 69761 . + 0 ID=cds-OFQ19036.1;Parent=gene-HMPREF2948_04435;Dbxref=NCBI_GP:OFQ19036.1;Name=OFQ19036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065641.1;locus_tag=HMPREF2948_04435;product=hypothetical protein;protein_id=OFQ19036.1;transl_table=11 KV814725.1 Genbank gene 69860 72505 . - . ID=gene-HMPREF2948_04440;Name=HMPREF2948_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04440 KV814725.1 Protein Homology CDS 69860 72505 . - 0 ID=cds-OFQ19037.1;Parent=gene-HMPREF2948_04440;Dbxref=NCBI_GP:OFQ19037.1;Name=OFQ19037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694321.1;locus_tag=HMPREF2948_04440;product=DNA gyrase subunit A;protein_id=OFQ19037.1;transl_table=11 KV814725.1 Genbank gene 72659 74422 . - . ID=gene-HMPREF2948_04445;Name=HMPREF2948_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04445 KV814725.1 Protein Homology CDS 72659 74422 . - 0 ID=cds-OFQ19038.1;Parent=gene-HMPREF2948_04445;Dbxref=NCBI_GP:OFQ19038.1;Name=OFQ19038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692282.1;locus_tag=HMPREF2948_04445;product=ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=OFQ19038.1;transl_table=11 KV814725.1 Genbank gene 74602 74940 . + . ID=gene-HMPREF2948_04450;Name=HMPREF2948_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04450 KV814725.1 Protein Homology CDS 74602 74940 . + 0 ID=cds-OFQ19039.1;Parent=gene-HMPREF2948_04450;Dbxref=NCBI_GP:OFQ19039.1;Name=OFQ19039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695704.1;locus_tag=HMPREF2948_04450;product=hypothetical protein;protein_id=OFQ19039.1;transl_table=11 KV814725.1 Genbank gene 74941 75657 . - . ID=gene-HMPREF2948_04455;Name=HMPREF2948_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04455 KV814725.1 Protein Homology CDS 74941 75657 . - 0 ID=cds-OFQ19040.1;Parent=gene-HMPREF2948_04455;Dbxref=NCBI_GP:OFQ19040.1;Name=OFQ19040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695705.1;locus_tag=HMPREF2948_04455;product=SAM-dependent methyltransferase;protein_id=OFQ19040.1;transl_table=11 KV814725.1 Genbank gene 75668 76369 . + . ID=gene-HMPREF2948_04460;Name=HMPREF2948_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04460 KV814725.1 Protein Homology CDS 75668 76369 . + 0 ID=cds-OFQ19041.1;Parent=gene-HMPREF2948_04460;Dbxref=NCBI_GP:OFQ19041.1;Name=OFQ19041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167740.1;locus_tag=HMPREF2948_04460;product=hydroxyacylglutathione hydrolase;protein_id=OFQ19041.1;transl_table=11 KV814725.1 Genbank gene 76505 77827 . + . ID=gene-HMPREF2948_04465;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=HMPREF2948_04465 KV814725.1 Protein Homology CDS 76505 77827 . + 0 ID=cds-OFQ19042.1;Parent=gene-HMPREF2948_04465;Dbxref=NCBI_GP:OFQ19042.1;Name=OFQ19042.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698257.1;locus_tag=HMPREF2948_04465;product=glutamyl-tRNA reductase;protein_id=OFQ19042.1;transl_table=11 KV814725.1 Genbank gene 77811 78554 . + . ID=gene-HMPREF2948_04470;Name=HMPREF2948_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04470 KV814725.1 Protein Homology CDS 77811 78554 . + 0 ID=cds-OFQ19043.1;Parent=gene-HMPREF2948_04470;Dbxref=NCBI_GP:OFQ19043.1;Name=OFQ19043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695710.1;locus_tag=HMPREF2948_04470;product=hypothetical protein;protein_id=OFQ19043.1;transl_table=11 KV814725.1 Genbank gene 78678 78754 . + . ID=gene-HMPREF2948_04475;Name=HMPREF2948_04475;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04475 KV814725.1 tRNAscan-SE tRNA 78678 78754 . + . ID=rna-HMPREF2948_04475;Parent=gene-HMPREF2948_04475;anticodon=(pos:78712..78714);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04475;product=tRNA-Met KV814725.1 tRNAscan-SE exon 78678 78754 . + . ID=exon-HMPREF2948_04475-1;Parent=rna-HMPREF2948_04475;anticodon=(pos:78712..78714);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04475;product=tRNA-Met KV814725.1 Genbank gene 78760 78844 . + . ID=gene-HMPREF2948_04480;Name=HMPREF2948_04480;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04480 KV814725.1 tRNAscan-SE tRNA 78760 78844 . + . ID=rna-HMPREF2948_04480;Parent=gene-HMPREF2948_04480;anticodon=(pos:78794..78796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04480;product=tRNA-Leu KV814725.1 tRNAscan-SE exon 78760 78844 . + . ID=exon-HMPREF2948_04480-1;Parent=rna-HMPREF2948_04480;anticodon=(pos:78794..78796);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04480;product=tRNA-Leu KV814725.1 Genbank gene 78872 78946 . + . ID=gene-HMPREF2948_04485;Name=HMPREF2948_04485;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_04485 KV814725.1 tRNAscan-SE tRNA 78872 78946 . + . ID=rna-HMPREF2948_04485;Parent=gene-HMPREF2948_04485;anticodon=(pos:78904..78906);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04485;product=tRNA-Gln KV814725.1 tRNAscan-SE exon 78872 78946 . + . ID=exon-HMPREF2948_04485-1;Parent=rna-HMPREF2948_04485;anticodon=(pos:78904..78906);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_04485;product=tRNA-Gln KV814725.1 Genbank gene 79295 80878 . - . ID=gene-HMPREF2948_04490;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=HMPREF2948_04490 KV814725.1 Protein Homology CDS 79295 80878 . - 0 ID=cds-OFQ18969.1;Parent=gene-HMPREF2948_04490;Dbxref=NCBI_GP:OFQ18969.1;Name=OFQ18969.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326123.1;locus_tag=HMPREF2948_04490;product=peptide chain release factor 3;protein_id=OFQ18969.1;transl_table=11 KV814725.1 Genbank gene 81101 81961 . + . ID=gene-HMPREF2948_04495;Name=HMPREF2948_04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04495 KV814725.1 Protein Homology CDS 81101 81961 . + 0 ID=cds-OFQ18970.1;Parent=gene-HMPREF2948_04495;Dbxref=NCBI_GP:OFQ18970.1;Name=OFQ18970.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VN04.1;locus_tag=HMPREF2948_04495;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=OFQ18970.1;transl_table=11 KV814725.1 Genbank gene 82034 82864 . + . ID=gene-HMPREF2948_04500;Name=HMPREF2948_04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04500 KV814725.1 Protein Homology CDS 82034 82864 . + 0 ID=cds-OFQ18971.1;Parent=gene-HMPREF2948_04500;Dbxref=NCBI_GP:OFQ18971.1;Name=OFQ18971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698771.1;locus_tag=HMPREF2948_04500;product=NAD(P)-dependent oxidoreductase;protein_id=OFQ18971.1;transl_table=11 KV814725.1 Genbank gene 82916 84250 . + . ID=gene-HMPREF2948_04505;Name=HMPREF2948_04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04505 KV814725.1 Protein Homology CDS 82916 84250 . + 0 ID=cds-OFQ18972.1;Parent=gene-HMPREF2948_04505;Dbxref=NCBI_GP:OFQ18972.1;Name=OFQ18972.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694213.1;locus_tag=HMPREF2948_04505;product=argininosuccinate synthase;protein_id=OFQ18972.1;transl_table=11 KV814725.1 Genbank gene 84313 84525 . - . ID=gene-HMPREF2948_04510;Name=HMPREF2948_04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04510 KV814725.1 Protein Homology CDS 84313 84525 . - 0 ID=cds-OFQ18973.1;Parent=gene-HMPREF2948_04510;Dbxref=NCBI_GP:OFQ18973.1;Name=OFQ18973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690312.1;locus_tag=HMPREF2948_04510;product=transposase;protein_id=OFQ18973.1;transl_table=11 KV814725.1 Genbank pseudogene 84590 85206 . + . ID=gene-HMPREF2948_04515;Name=HMPREF2948_04515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04515;pseudo=true KV814725.1 Protein Homology CDS 84590 85206 . + 0 ID=cds-HMPREF2948_04515;Parent=gene-HMPREF2948_04515;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45283.2;locus_tag=HMPREF2948_04515;product=adenylosuccinate synthase;pseudo=true;transl_table=11 KV814725.1 Genbank pseudogene 85339 86207 . - . ID=gene-HMPREF2948_04520;Name=HMPREF2948_04520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04520;pseudo=true KV814725.1 GeneMarkS+ CDS 85339 86207 . - 2 ID=cds-HMPREF2948_04520;Parent=gene-HMPREF2948_04520;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04520;product=hypothetical protein;pseudo=true;transl_table=11 KV814725.1 Genbank pseudogene 86308 86958 . - . ID=gene-HMPREF2948_04525;Name=HMPREF2948_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04525;pseudo=true KV814725.1 Protein Homology CDS 86308 86958 . - 2 ID=cds-HMPREF2948_04525;Parent=gene-HMPREF2948_04525;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625658.1;locus_tag=HMPREF2948_04525;product=hypothetical protein;pseudo=true;transl_table=11 KV814725.1 Genbank pseudogene 87059 90740 . - . ID=gene-HMPREF2948_04530;Name=HMPREF2948_04530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04530;pseudo=true KV814725.1 GeneMarkS+ CDS 87059 90740 . - 0 ID=cds-HMPREF2948_04530;Parent=gene-HMPREF2948_04530;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04530;product=hypothetical protein;pseudo=true;transl_table=11 KV814725.1 Genbank gene 90993 92069 . - . ID=gene-HMPREF2948_04535;Name=HMPREF2948_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04535 KV814725.1 Protein Homology CDS 90993 92069 . - 0 ID=cds-OFQ18775.1;Parent=gene-HMPREF2948_04535;Dbxref=NCBI_GP:OFQ18775.1;Name=OFQ18775.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012073424.1;locus_tag=HMPREF2948_04535;product=sulfate ABC transporter ATP-binding protein;protein_id=OFQ18775.1;transl_table=11 KV814725.1 Genbank gene 92087 92902 . - . ID=gene-HMPREF2948_04540;Name=HMPREF2948_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04540 KV814725.1 Protein Homology CDS 92087 92902 . - 0 ID=cds-OFQ18776.1;Parent=gene-HMPREF2948_04540;Dbxref=NCBI_GP:OFQ18776.1;Name=OFQ18776.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698792.1;locus_tag=HMPREF2948_04540;product=sulfate ABC transporter permease subunit CysW;protein_id=OFQ18776.1;transl_table=11 KV814725.1 Genbank gene 92912 93733 . - . ID=gene-HMPREF2948_04545;Name=HMPREF2948_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04545 KV814725.1 Protein Homology CDS 92912 93733 . - 0 ID=cds-OFQ18777.1;Parent=gene-HMPREF2948_04545;Dbxref=NCBI_GP:OFQ18777.1;Name=OFQ18777.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698785.1;locus_tag=HMPREF2948_04545;product=sulfate/thiosulfate transporter subunit;protein_id=OFQ18777.1;transl_table=11 KV814725.1 Genbank gene 93991 94998 . + . ID=gene-HMPREF2948_04550;Name=HMPREF2948_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04550 KV814725.1 Protein Homology CDS 93991 94998 . + 0 ID=cds-OFQ18778.1;Parent=gene-HMPREF2948_04550;Dbxref=NCBI_GP:OFQ18778.1;Name=OFQ18778.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695724.1;locus_tag=HMPREF2948_04550;product=sulfate ABC transporter substrate-binding protein;protein_id=OFQ18778.1;transl_table=11 KV814725.1 Genbank gene 95010 96440 . + . ID=gene-HMPREF2948_04555;Name=HMPREF2948_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04555 KV814725.1 Protein Homology CDS 95010 96440 . + 0 ID=cds-OFQ18779.1;Parent=gene-HMPREF2948_04555;Dbxref=NCBI_GP:OFQ18779.1;Name=OFQ18779.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698764.1;locus_tag=HMPREF2948_04555;product=sirohydrochlorin ferrochelatase;protein_id=OFQ18779.1;transl_table=11 KV814725.1 Genbank gene 96451 97185 . + . ID=gene-HMPREF2948_04560;Name=HMPREF2948_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04560 KV814725.1 Protein Homology CDS 96451 97185 . + 0 ID=cds-OFQ18780.1;Parent=gene-HMPREF2948_04560;Dbxref=NCBI_GP:OFQ18780.1;Name=OFQ18780.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005605864.1;locus_tag=HMPREF2948_04560;product=phosphoadenosine phosphosulfate reductase;protein_id=OFQ18780.1;transl_table=11 KV814725.1 Genbank gene 97206 98129 . + . ID=gene-HMPREF2948_04565;Name=HMPREF2948_04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04565 KV814725.1 Protein Homology CDS 97206 98129 . + 0 ID=cds-OFQ18781.1;Parent=gene-HMPREF2948_04565;Dbxref=NCBI_GP:OFQ18781.1;Name=OFQ18781.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014582435.1;locus_tag=HMPREF2948_04565;product=sulfate adenylyltransferase small subunit;protein_id=OFQ18781.1;transl_table=11 KV814725.1 Genbank gene 98357 99640 . + . ID=gene-HMPREF2948_04570;Name=HMPREF2948_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04570 KV814725.1 Protein Homology CDS 98357 99640 . + 0 ID=cds-OFQ18782.1;Parent=gene-HMPREF2948_04570;Dbxref=NCBI_GP:OFQ18782.1;Name=OFQ18782.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002245037.1;locus_tag=HMPREF2948_04570;product=sulfate adenylyltransferase;protein_id=OFQ18782.1;transl_table=11 KV814725.1 Genbank gene 99698 101491 . + . ID=gene-HMPREF2948_04575;Name=HMPREF2948_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04575 KV814725.1 Protein Homology CDS 99698 101491 . + 0 ID=cds-OFQ18783.1;Parent=gene-HMPREF2948_04575;Dbxref=NCBI_GP:OFQ18783.1;Name=OFQ18783.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014992307.1;locus_tag=HMPREF2948_04575;product=sulfite reductase subunit alpha;protein_id=OFQ18783.1;transl_table=11 KV814725.1 Genbank gene 101509 103275 . + . ID=gene-HMPREF2948_04580;Name=HMPREF2948_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04580 KV814725.1 Protein Homology CDS 101509 103275 . + 0 ID=cds-OFQ18784.1;Parent=gene-HMPREF2948_04580;Dbxref=NCBI_GP:OFQ18784.1;Name=OFQ18784.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002251317.1;locus_tag=HMPREF2948_04580;product=sulfite reductase subunit beta;protein_id=OFQ18784.1;transl_table=11 KV814725.1 Genbank gene 103368 103802 . - . ID=gene-HMPREF2948_04585;Name=HMPREF2948_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04585 KV814725.1 Protein Homology CDS 103368 103802 . - 0 ID=cds-OFQ18785.1;Parent=gene-HMPREF2948_04585;Dbxref=NCBI_GP:OFQ18785.1;Name=OFQ18785.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695732.1;locus_tag=HMPREF2948_04585;product=transcriptional repressor;protein_id=OFQ18785.1;transl_table=11 KV814725.1 Genbank gene 103836 104360 . - . ID=gene-HMPREF2948_04590;Name=HMPREF2948_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04590 KV814725.1 Protein Homology CDS 103836 104360 . - 0 ID=cds-OFQ18786.1;Parent=gene-HMPREF2948_04590;Dbxref=NCBI_GP:OFQ18786.1;Name=OFQ18786.1;Note=An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250414.1;locus_tag=HMPREF2948_04590;product=flavodoxin FldA;protein_id=OFQ18786.1;transl_table=11 KV814725.1 Genbank gene 104485 105270 . - . ID=gene-HMPREF2948_04595;Name=HMPREF2948_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04595 KV814725.1 Protein Homology CDS 104485 105270 . - 0 ID=cds-OFQ18787.1;Parent=gene-HMPREF2948_04595;Dbxref=NCBI_GP:OFQ18787.1;Name=OFQ18787.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065627.1;locus_tag=HMPREF2948_04595;product=acyl-CoA esterase;protein_id=OFQ18787.1;transl_table=11 KV814725.1 Genbank gene 105341 105982 . + . ID=gene-HMPREF2948_04600;Name=HMPREF2948_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04600 KV814725.1 Protein Homology CDS 105341 105982 . + 0 ID=cds-OFQ18788.1;Parent=gene-HMPREF2948_04600;Dbxref=NCBI_GP:OFQ18788.1;Name=OFQ18788.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341212.1;locus_tag=HMPREF2948_04600;product=replication initiation regulator SeqA;protein_id=OFQ18788.1;transl_table=11 KV814725.1 Genbank gene 105987 107336 . + . ID=gene-HMPREF2948_04605;Name=HMPREF2948_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04605 KV814725.1 Protein Homology CDS 105987 107336 . + 0 ID=cds-OFQ18789.1;Parent=gene-HMPREF2948_04605;Dbxref=NCBI_GP:OFQ18789.1;Name=OFQ18789.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695737.1;locus_tag=HMPREF2948_04605;product=2-succinylbenzoate-CoA ligase;protein_id=OFQ18789.1;transl_table=11 KV814725.1 Genbank gene 107353 110697 . + . ID=gene-HMPREF2948_04610;Name=HMPREF2948_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04610 KV814725.1 Protein Homology CDS 107353 110697 . + 0 ID=cds-OFQ18790.1;Parent=gene-HMPREF2948_04610;Dbxref=NCBI_GP:OFQ18790.1;Name=OFQ18790.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695738.1;locus_tag=HMPREF2948_04610;product=hypothetical protein;protein_id=OFQ18790.1;transl_table=11 KV814725.1 Genbank gene 110713 111786 . + . ID=gene-HMPREF2948_04615;Name=HMPREF2948_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04615 KV814725.1 Protein Homology CDS 110713 111786 . + 0 ID=cds-OFQ18791.1;Parent=gene-HMPREF2948_04615;Dbxref=NCBI_GP:OFQ18791.1;Name=OFQ18791.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005597166.1;locus_tag=HMPREF2948_04615;product=chorismate synthase;protein_id=OFQ18791.1;transl_table=11 KV814725.1 Genbank gene 111850 112722 . + . ID=gene-HMPREF2948_04620;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=HMPREF2948_04620 KV814725.1 Protein Homology CDS 111850 112722 . + 0 ID=cds-OFQ18792.1;Parent=gene-HMPREF2948_04620;Dbxref=NCBI_GP:OFQ18792.1;Name=OFQ18792.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006717635.1;locus_tag=HMPREF2948_04620;product=murein endopeptidase;protein_id=OFQ18792.1;transl_table=11 KV814725.1 Genbank gene 112733 113500 . + . ID=gene-HMPREF2948_04625;Name=HMPREF2948_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04625 KV814725.1 Protein Homology CDS 112733 113500 . + 0 ID=cds-OFQ18793.1;Parent=gene-HMPREF2948_04625;Dbxref=NCBI_GP:OFQ18793.1;Name=OFQ18793.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664344.1;locus_tag=HMPREF2948_04625;product=hypothetical protein;protein_id=OFQ18793.1;transl_table=11 KV814725.1 Genbank gene 113510 114469 . + . ID=gene-HMPREF2948_04630;Name=HMPREF2948_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04630 KV814725.1 Protein Homology CDS 113510 114469 . + 0 ID=cds-OFQ18794.1;Parent=gene-HMPREF2948_04630;Dbxref=NCBI_GP:OFQ18794.1;Name=OFQ18794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695744.1;locus_tag=HMPREF2948_04630;product=lauroyl acyltransferase;protein_id=OFQ18794.1;transl_table=11 KV814725.1 Genbank gene 114583 115125 . + . ID=gene-HMPREF2948_04635;Name=HMPREF2948_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04635 KV814725.1 Protein Homology CDS 114583 115125 . + 0 ID=cds-OFQ18795.1;Parent=gene-HMPREF2948_04635;Dbxref=NCBI_GP:OFQ18795.1;Name=OFQ18795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065619.1;locus_tag=HMPREF2948_04635;product=adenine phosphoribosyltransferase;protein_id=OFQ18795.1;transl_table=11 KV814725.1 Genbank gene 115142 117289 . + . ID=gene-HMPREF2948_04640;Name=HMPREF2948_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04640 KV814725.1 Protein Homology CDS 115142 117289 . + 0 ID=cds-OFQ18796.1;Parent=gene-HMPREF2948_04640;Dbxref=NCBI_GP:OFQ18796.1;Name=OFQ18796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43746.1;locus_tag=HMPREF2948_04640;product=DNA polymerase III subunit gamma/tau;protein_id=OFQ18796.1;transl_table=11 KV814725.1 Genbank gene 117330 118178 . + . ID=gene-HMPREF2948_04645;Name=HMPREF2948_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04645 KV814725.1 Protein Homology CDS 117330 118178 . + 0 ID=cds-OFQ18797.1;Parent=gene-HMPREF2948_04645;Dbxref=NCBI_GP:OFQ18797.1;Name=OFQ18797.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009874830.1;locus_tag=HMPREF2948_04645;product=hypothetical protein;protein_id=OFQ18797.1;transl_table=11 KV814725.1 Genbank gene 118245 119498 . - . ID=gene-HMPREF2948_04650;Name=HMPREF2948_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04650 KV814725.1 Protein Homology CDS 118245 119498 . - 0 ID=cds-OFQ18798.1;Parent=gene-HMPREF2948_04650;Dbxref=NCBI_GP:OFQ18798.1;Name=OFQ18798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694299.1;locus_tag=HMPREF2948_04650;product=gamma-glutamyl-phosphate reductase;protein_id=OFQ18798.1;transl_table=11 KV814725.1 Genbank gene 119514 120176 . - . ID=gene-HMPREF2948_04655;Name=HMPREF2948_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04655 KV814725.1 Protein Homology CDS 119514 120176 . - 0 ID=cds-OFQ18799.1;Parent=gene-HMPREF2948_04655;Dbxref=NCBI_GP:OFQ18799.1;Name=OFQ18799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341560.1;locus_tag=HMPREF2948_04655;product=hypothetical protein;protein_id=OFQ18799.1;transl_table=11 KV814725.1 Genbank gene 120310 121110 . + . ID=gene-HMPREF2948_04660;Name=HMPREF2948_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04660 KV814725.1 Protein Homology CDS 120310 121110 . + 0 ID=cds-OFQ18800.1;Parent=gene-HMPREF2948_04660;Dbxref=NCBI_GP:OFQ18800.1;Name=OFQ18800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694301.1;locus_tag=HMPREF2948_04660;product=hypothetical protein;protein_id=OFQ18800.1;transl_table=11 KV814725.1 Genbank gene 121110 121313 . + . ID=gene-HMPREF2948_04665;Name=HMPREF2948_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04665 KV814725.1 GeneMarkS+ CDS 121110 121313 . + 0 ID=cds-OFQ18801.1;Parent=gene-HMPREF2948_04665;Dbxref=NCBI_GP:OFQ18801.1;Name=OFQ18801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04665;product=hypothetical protein;protein_id=OFQ18801.1;transl_table=11 KV814725.1 Genbank gene 121365 121583 . - . ID=gene-HMPREF2948_04670;Name=HMPREF2948_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04670 KV814725.1 Protein Homology CDS 121365 121583 . - 0 ID=cds-OFQ18802.1;Parent=gene-HMPREF2948_04670;Dbxref=NCBI_GP:OFQ18802.1;Name=OFQ18802.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708313.1;locus_tag=HMPREF2948_04670;product=hypothetical protein;protein_id=OFQ18802.1;transl_table=11 KV814725.1 Genbank gene 121603 121785 . + . ID=gene-HMPREF2948_04675;Name=HMPREF2948_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04675 KV814725.1 GeneMarkS+ CDS 121603 121785 . + 0 ID=cds-OFQ18803.1;Parent=gene-HMPREF2948_04675;Dbxref=NCBI_GP:OFQ18803.1;Name=OFQ18803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04675;product=hypothetical protein;protein_id=OFQ18803.1;transl_table=11 KV814725.1 Genbank gene 121822 123111 . + . ID=gene-HMPREF2948_04680;Name=HMPREF2948_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04680 KV814725.1 Protein Homology CDS 121822 123111 . + 0 ID=cds-OFQ18804.1;Parent=gene-HMPREF2948_04680;Dbxref=NCBI_GP:OFQ18804.1;Name=OFQ18804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65SK3.1;locus_tag=HMPREF2948_04680;product=serine--tRNA ligase;protein_id=OFQ18804.1;transl_table=11 KV814725.1 Genbank gene 123269 124213 . + . ID=gene-HMPREF2948_04685;Name=HMPREF2948_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04685 KV814725.1 Protein Homology CDS 123269 124213 . + 0 ID=cds-OFQ18805.1;Parent=gene-HMPREF2948_04685;Dbxref=NCBI_GP:OFQ18805.1;Name=OFQ18805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708059.1;locus_tag=HMPREF2948_04685;product=tellurite resistance protein TehA;protein_id=OFQ18805.1;transl_table=11 KV814725.1 Genbank gene 124295 125008 . - . ID=gene-HMPREF2948_04690;Name=HMPREF2948_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04690 KV814725.1 Protein Homology CDS 124295 125008 . - 0 ID=cds-OFQ18806.1;Parent=gene-HMPREF2948_04690;Dbxref=NCBI_GP:OFQ18806.1;Name=OFQ18806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524341.1;locus_tag=HMPREF2948_04690;product=GntR family transcriptional regulator;protein_id=OFQ18806.1;transl_table=11 KV814725.1 Genbank gene 126710 128977 . + . ID=gene-HMPREF2948_04695;Name=HMPREF2948_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04695 KV814725.1 Protein Homology CDS 126710 128977 . + 0 ID=cds-OFQ18881.1;Parent=gene-HMPREF2948_04695;Dbxref=NCBI_GP:OFQ18881.1;Name=OFQ18881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706380.1;locus_tag=HMPREF2948_04695;product=maltose phosphorylase;protein_id=OFQ18881.1;transl_table=11 KV814725.1 Genbank gene 128987 129778 . + . ID=gene-HMPREF2948_04700;Name=HMPREF2948_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04700 KV814725.1 Protein Homology CDS 128987 129778 . + 0 ID=cds-OFQ18807.1;Parent=gene-HMPREF2948_04700;Dbxref=NCBI_GP:OFQ18807.1;Name=OFQ18807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524906.1;locus_tag=HMPREF2948_04700;product=endonuclease;protein_id=OFQ18807.1;transl_table=11 KV814725.1 Genbank gene 129789 131453 . + . ID=gene-HMPREF2948_04705;Name=HMPREF2948_04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04705 KV814725.1 Protein Homology CDS 129789 131453 . + 0 ID=cds-OFQ18808.1;Parent=gene-HMPREF2948_04705;Dbxref=NCBI_GP:OFQ18808.1;Name=OFQ18808.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005703632.1;locus_tag=HMPREF2948_04705;product=PTS transporter subunit IICB;protein_id=OFQ18808.1;transl_table=11 KV814725.1 Genbank gene 131652 133631 . - . ID=gene-HMPREF2948_04710;Name=HMPREF2948_04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04710 KV814725.1 Protein Homology CDS 131652 133631 . - 0 ID=cds-OFQ18809.1;Parent=gene-HMPREF2948_04710;Dbxref=NCBI_GP:OFQ18809.1;Name=OFQ18809.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007242073.1;locus_tag=HMPREF2948_04710;product=exoribonuclease II;protein_id=OFQ18809.1;transl_table=11 KV814725.1 Genbank gene 133699 134487 . - . ID=gene-HMPREF2948_04715;Name=HMPREF2948_04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04715 KV814725.1 Protein Homology CDS 133699 134487 . - 0 ID=cds-OFQ18810.1;Parent=gene-HMPREF2948_04715;Dbxref=NCBI_GP:OFQ18810.1;Name=OFQ18810.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649928.1;locus_tag=HMPREF2948_04715;product=enoyl-ACP reductase;protein_id=OFQ18810.1;transl_table=11 KV814725.1 Genbank gene 134573 135328 . - . ID=gene-HMPREF2948_04720;Name=HMPREF2948_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04720 KV814725.1 Protein Homology CDS 134573 135328 . - 0 ID=cds-OFQ18811.1;Parent=gene-HMPREF2948_04720;Dbxref=NCBI_GP:OFQ18811.1;Name=OFQ18811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630686.1;locus_tag=HMPREF2948_04720;product=Nif3-like dinuclear metal center hexameric protein;protein_id=OFQ18811.1;transl_table=11 KV814725.1 Genbank gene 135573 136508 . - . ID=gene-HMPREF2948_04725;Name=HMPREF2948_04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04725 KV814725.1 Protein Homology CDS 135573 136508 . - 0 ID=cds-OFQ18812.1;Parent=gene-HMPREF2948_04725;Dbxref=NCBI_GP:OFQ18812.1;Name=OFQ18812.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065601.1;locus_tag=HMPREF2948_04725;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=OFQ18812.1;transl_table=11 KV814725.1 Genbank gene 136606 138036 . + . ID=gene-HMPREF2948_04730;Name=HMPREF2948_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04730 KV814725.1 Protein Homology CDS 136606 138036 . + 0 ID=cds-OFQ18813.1;Parent=gene-HMPREF2948_04730;Dbxref=NCBI_GP:OFQ18813.1;Name=OFQ18813.1;Note=catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693548.1;locus_tag=HMPREF2948_04730;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;protein_id=OFQ18813.1;transl_table=11 KV814725.1 Genbank gene 138090 140078 . - . ID=gene-HMPREF2948_04735;Name=HMPREF2948_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04735 KV814725.1 Protein Homology CDS 138090 140078 . - 0 ID=cds-OFQ18814.1;Parent=gene-HMPREF2948_04735;Dbxref=NCBI_GP:OFQ18814.1;Name=OFQ18814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005544755.1;locus_tag=HMPREF2948_04735;product=TonB-dependent receptor;protein_id=OFQ18814.1;transl_table=11 KV814725.1 Genbank gene 140047 140562 . - . ID=gene-HMPREF2948_04740;Name=HMPREF2948_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04740 KV814725.1 Protein Homology CDS 140047 140562 . - 0 ID=cds-OFQ18815.1;Parent=gene-HMPREF2948_04740;Dbxref=NCBI_GP:OFQ18815.1;Name=OFQ18815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695771.1;locus_tag=HMPREF2948_04740;product=hypothetical protein;protein_id=OFQ18815.1;transl_table=11 KV814725.1 Genbank pseudogene 140708 141705 . + . ID=gene-HMPREF2948_04745;Name=HMPREF2948_04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04745;pseudo=true KV814725.1 Protein Homology CDS 140708 141705 . + 0 ID=cds-HMPREF2948_04745;Parent=gene-HMPREF2948_04745;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065597.1;locus_tag=HMPREF2948_04745;product=iron ABC transporter substrate-binding protein;pseudo=true;transl_table=11 KV814725.1 Genbank gene 141708 142721 . + . ID=gene-HMPREF2948_04750;Name=HMPREF2948_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04750 KV814725.1 Protein Homology CDS 141708 142721 . + 0 ID=cds-OFQ18816.1;Parent=gene-HMPREF2948_04750;Dbxref=NCBI_GP:OFQ18816.1;Name=OFQ18816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005576218.1;locus_tag=HMPREF2948_04750;product=iron ABC transporter permease;protein_id=OFQ18816.1;transl_table=11 KV814725.1 Genbank gene 142718 143467 . + . ID=gene-HMPREF2948_04755;Name=HMPREF2948_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04755 KV814725.1 Protein Homology CDS 142718 143467 . + 0 ID=cds-OFQ18817.1;Parent=gene-HMPREF2948_04755;Dbxref=NCBI_GP:OFQ18817.1;Name=OFQ18817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005751954.1;locus_tag=HMPREF2948_04755;product=iron ABC transporter ATP-binding protein;protein_id=OFQ18817.1;transl_table=11 KV814725.1 Genbank gene 143477 144322 . + . ID=gene-HMPREF2948_04760;Name=HMPREF2948_04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04760 KV814725.1 Protein Homology CDS 143477 144322 . + 0 ID=cds-OFQ18818.1;Parent=gene-HMPREF2948_04760;Dbxref=NCBI_GP:OFQ18818.1;Name=OFQ18818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698780.1;locus_tag=HMPREF2948_04760;product=molybdenum transporter ModD;protein_id=OFQ18818.1;transl_table=11 KV814725.1 Genbank gene 144412 145452 . + . ID=gene-HMPREF2948_04765;Name=HMPREF2948_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04765 KV814725.1 Protein Homology CDS 144412 145452 . + 0 ID=cds-OFQ18819.1;Parent=gene-HMPREF2948_04765;Dbxref=NCBI_GP:OFQ18819.1;Name=OFQ18819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698766.1;locus_tag=HMPREF2948_04765;product=hypothetical protein;protein_id=OFQ18819.1;transl_table=11 KV814725.1 Genbank gene 145442 146455 . + . ID=gene-HMPREF2948_04770;Name=HMPREF2948_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04770 KV814725.1 Protein Homology CDS 145442 146455 . + 0 ID=cds-OFQ18820.1;Parent=gene-HMPREF2948_04770;Dbxref=NCBI_GP:OFQ18820.1;Name=OFQ18820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695781.1;locus_tag=HMPREF2948_04770;product=ABC transporter permease;protein_id=OFQ18820.1;transl_table=11 KV814725.1 Genbank gene 146448 147224 . + . ID=gene-HMPREF2948_04775;Name=HMPREF2948_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04775 KV814725.1 Protein Homology CDS 146448 147224 . + 0 ID=cds-OFQ18821.1;Parent=gene-HMPREF2948_04775;Dbxref=NCBI_GP:OFQ18821.1;Name=OFQ18821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695782.1;locus_tag=HMPREF2948_04775;product=ABC transporter ATP-binding protein;protein_id=OFQ18821.1;transl_table=11 KV814725.1 Genbank gene 147217 147933 . + . ID=gene-HMPREF2948_04780;Name=HMPREF2948_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04780 KV814725.1 Protein Homology CDS 147217 147933 . + 0 ID=cds-OFQ18822.1;Parent=gene-HMPREF2948_04780;Dbxref=NCBI_GP:OFQ18822.1;Name=OFQ18822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695783.1;locus_tag=HMPREF2948_04780;product=molybdenum ABC transporter substrate-binding protein;protein_id=OFQ18822.1;transl_table=11 KV814725.1 Genbank gene 148067 148336 . + . ID=gene-HMPREF2948_04785;Name=HMPREF2948_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04785 KV814725.1 Protein Homology CDS 148067 148336 . + 0 ID=cds-OFQ18823.1;Parent=gene-HMPREF2948_04785;Dbxref=NCBI_GP:OFQ18823.1;Name=OFQ18823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652821.1;locus_tag=HMPREF2948_04785;product=30S ribosomal protein S15;protein_id=OFQ18823.1;transl_table=11 KV814725.1 Genbank gene 148450 150489 . - . ID=gene-HMPREF2948_04790;Name=HMPREF2948_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04790 KV814725.1 Protein Homology CDS 148450 150489 . - 0 ID=cds-OFQ18824.1;Parent=gene-HMPREF2948_04790;Dbxref=NCBI_GP:OFQ18824.1;Name=OFQ18824.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698782.1;locus_tag=HMPREF2948_04790;product=oligopeptidase A;protein_id=OFQ18824.1;transl_table=11 KV814725.1 Genbank gene 150720 151082 . + . ID=gene-HMPREF2948_04795;Name=HMPREF2948_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04795 KV814725.1 Protein Homology CDS 150720 151082 . + 0 ID=cds-OFQ18882.1;Parent=gene-HMPREF2948_04795;Dbxref=NCBI_GP:OFQ18882.1;Name=OFQ18882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540969.1;locus_tag=HMPREF2948_04795;product=hypothetical protein;protein_id=OFQ18882.1;transl_table=11 KV814725.1 Genbank gene 151075 152637 . + . ID=gene-HMPREF2948_04800;Name=HMPREF2948_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04800 KV814725.1 Protein Homology CDS 151075 152637 . + 0 ID=cds-OFQ18825.1;Parent=gene-HMPREF2948_04800;Dbxref=NCBI_GP:OFQ18825.1;Name=OFQ18825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44572.1;locus_tag=HMPREF2948_04800;product=hypothetical protein;protein_id=OFQ18825.1;transl_table=11 KV814725.1 Genbank gene 152774 153415 . + . ID=gene-HMPREF2948_04805;Name=HMPREF2948_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04805 KV814725.1 Protein Homology CDS 152774 153415 . + 0 ID=cds-OFQ18826.1;Parent=gene-HMPREF2948_04805;Dbxref=NCBI_GP:OFQ18826.1;Name=OFQ18826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065589.1;locus_tag=HMPREF2948_04805;product=MerR family transcriptional regulator;protein_id=OFQ18826.1;transl_table=11 KV814725.1 Genbank gene 153412 156861 . + . ID=gene-HMPREF2948_04810;Name=HMPREF2948_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04810 KV814725.1 Protein Homology CDS 153412 156861 . + 0 ID=cds-OFQ18827.1;Parent=gene-HMPREF2948_04810;Dbxref=NCBI_GP:OFQ18827.1;Name=OFQ18827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005709220.1;locus_tag=HMPREF2948_04810;product=2-acyl-glycerophospho-ethanolamine acyltransferase;protein_id=OFQ18827.1;transl_table=11 KV814725.1 Genbank gene 156931 157962 . - . ID=gene-HMPREF2948_04815;Name=HMPREF2948_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04815 KV814725.1 Protein Homology CDS 156931 157962 . - 0 ID=cds-OFQ18828.1;Parent=gene-HMPREF2948_04815;Dbxref=NCBI_GP:OFQ18828.1;Name=OFQ18828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694252.1;locus_tag=HMPREF2948_04815;product=branched chain amino acid aminotransferase;protein_id=OFQ18828.1;transl_table=11 KV814725.1 Genbank gene 158445 159338 . + . ID=gene-HMPREF2948_04820;Name=HMPREF2948_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04820 KV814725.1 Protein Homology CDS 158445 159338 . + 0 ID=cds-OFQ18829.1;Parent=gene-HMPREF2948_04820;Dbxref=NCBI_GP:OFQ18829.1;Name=OFQ18829.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686512.1;locus_tag=HMPREF2948_04820;product=transcriptional regulator;protein_id=OFQ18829.1;transl_table=11 KV814725.1 Genbank gene 159331 160419 . + . ID=gene-HMPREF2948_04825;Name=HMPREF2948_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04825 KV814725.1 Protein Homology CDS 159331 160419 . + 0 ID=cds-OFQ18830.1;Parent=gene-HMPREF2948_04825;Dbxref=NCBI_GP:OFQ18830.1;Name=OFQ18830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45100.1;locus_tag=HMPREF2948_04825;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=OFQ18830.1;transl_table=11 KV814725.1 Genbank gene 160478 161443 . - . ID=gene-HMPREF2948_04830;Name=HMPREF2948_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04830 KV814725.1 Protein Homology CDS 160478 161443 . - 0 ID=cds-OFQ18831.1;Parent=gene-HMPREF2948_04830;Dbxref=NCBI_GP:OFQ18831.1;Name=OFQ18831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65UH7.1;locus_tag=HMPREF2948_04830;product=tRNA (mo5U34)-methyltransferase;protein_id=OFQ18831.1;transl_table=11 KV814725.1 Genbank gene 161443 162957 . - . ID=gene-HMPREF2948_04835;Name=HMPREF2948_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04835 KV814725.1 Protein Homology CDS 161443 162957 . - 0 ID=cds-OFQ18832.1;Parent=gene-HMPREF2948_04835;Dbxref=NCBI_GP:OFQ18832.1;Name=OFQ18832.1;Note=involved in the sodium dependent uptake of proline;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012340603.1;locus_tag=HMPREF2948_04835;product=sodium:proline symporter;protein_id=OFQ18832.1;transl_table=11 KV814725.1 Genbank gene 163073 164548 . + . ID=gene-HMPREF2948_04840;Name=HMPREF2948_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04840 KV814725.1 Protein Homology CDS 163073 164548 . + 0 ID=cds-OFQ18833.1;Parent=gene-HMPREF2948_04840;Dbxref=NCBI_GP:OFQ18833.1;Name=OFQ18833.1;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005553141.1;locus_tag=HMPREF2948_04840;product=ribonuclease G;protein_id=OFQ18833.1;transl_table=11 KV814725.1 Genbank gene 164663 165556 . + . ID=gene-HMPREF2948_04845;Name=HMPREF2948_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04845 KV814725.1 GeneMarkS+ CDS 164663 165556 . + 0 ID=cds-OFQ18834.1;Parent=gene-HMPREF2948_04845;Dbxref=NCBI_GP:OFQ18834.1;Name=OFQ18834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_04845;product=hypothetical protein;protein_id=OFQ18834.1;transl_table=11 KV814725.1 Genbank gene 165659 167056 . - . ID=gene-HMPREF2948_04850;Name=HMPREF2948_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04850 KV814725.1 Protein Homology CDS 165659 167056 . - 0 ID=cds-OFQ18835.1;Parent=gene-HMPREF2948_04850;Dbxref=NCBI_GP:OFQ18835.1;Name=OFQ18835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005751492.1;locus_tag=HMPREF2948_04850;product=MATE family efflux transporter;protein_id=OFQ18835.1;transl_table=11 KV814725.1 Genbank gene 167102 167713 . + . ID=gene-HMPREF2948_04855;Name=HMPREF2948_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04855 KV814725.1 Protein Homology CDS 167102 167713 . + 0 ID=cds-OFQ18836.1;Parent=gene-HMPREF2948_04855;Dbxref=NCBI_GP:OFQ18836.1;Name=OFQ18836.1;Note=catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065575.1;locus_tag=HMPREF2948_04855;product=riboflavin synthase subunit alpha;protein_id=OFQ18836.1;transl_table=11 KV814725.1 Genbank gene 167783 168391 . - . ID=gene-HMPREF2948_04860;Name=HMPREF2948_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04860 KV814725.1 Protein Homology CDS 167783 168391 . - 0 ID=cds-OFQ18837.1;Parent=gene-HMPREF2948_04860;Dbxref=NCBI_GP:OFQ18837.1;Name=OFQ18837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698817.1;locus_tag=HMPREF2948_04860;product=alpha-amylase;protein_id=OFQ18837.1;transl_table=11 KV814725.1 Genbank gene 168618 168905 . + . ID=gene-HMPREF2948_04865;Name=HMPREF2948_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04865 KV814725.1 Protein Homology CDS 168618 168905 . + 0 ID=cds-OFQ18838.1;Parent=gene-HMPREF2948_04865;Dbxref=NCBI_GP:OFQ18838.1;Name=OFQ18838.1;Note=the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698823.1;locus_tag=HMPREF2948_04865;product=50S ribosomal protein L25;protein_id=OFQ18838.1;transl_table=11 KV814725.1 Genbank gene 169010 169804 . + . ID=gene-HMPREF2948_04870;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=HMPREF2948_04870 KV814725.1 Protein Homology CDS 169010 169804 . + 0 ID=cds-OFQ18839.1;Parent=gene-HMPREF2948_04870;Dbxref=NCBI_GP:OFQ18839.1;Name=OFQ18839.1;Note=mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability;gbkey=CDS;gene=truA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065569.1;locus_tag=HMPREF2948_04870;product=tRNA pseudouridine(38-40) synthase;protein_id=OFQ18839.1;transl_table=11 KV814725.1 Genbank gene 169870 170760 . + . ID=gene-HMPREF2948_04875;Name=HMPREF2948_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04875 KV814725.1 Protein Homology CDS 169870 170760 . + 0 ID=cds-OFQ18840.1;Parent=gene-HMPREF2948_04875;Dbxref=NCBI_GP:OFQ18840.1;Name=OFQ18840.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CN12.1;locus_tag=HMPREF2948_04875;product=acetyl-CoA carboxylase subunit beta;protein_id=OFQ18840.1;transl_table=11 KV814725.1 Genbank gene 170765 172069 . + . ID=gene-HMPREF2948_04880;Name=HMPREF2948_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04880 KV814725.1 Protein Homology CDS 170765 172069 . + 0 ID=cds-OFQ18841.1;Parent=gene-HMPREF2948_04880;Dbxref=NCBI_GP:OFQ18841.1;Name=OFQ18841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698825.1;locus_tag=HMPREF2948_04880;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=OFQ18841.1;transl_table=11 KV814725.1 Genbank gene 172109 172993 . - . ID=gene-HMPREF2948_04885;Name=HMPREF2948_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04885 KV814725.1 Protein Homology CDS 172109 172993 . - 0 ID=cds-OFQ18842.1;Parent=gene-HMPREF2948_04885;Dbxref=NCBI_GP:OFQ18842.1;Name=OFQ18842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657112.1;locus_tag=HMPREF2948_04885;product=epimerase;protein_id=OFQ18842.1;transl_table=11 KV814725.1 Genbank gene 172990 173448 . - . ID=gene-HMPREF2948_04890;Name=HMPREF2948_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04890 KV814725.1 Protein Homology CDS 172990 173448 . - 0 ID=cds-OFQ18843.1;Parent=gene-HMPREF2948_04890;Dbxref=NCBI_GP:OFQ18843.1;Name=OFQ18843.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663775.1;locus_tag=HMPREF2948_04890;product=arginine repressor;protein_id=OFQ18843.1;transl_table=11 KV814725.1 Genbank gene 173635 174570 . + . ID=gene-HMPREF2948_04895;Name=HMPREF2948_04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04895 KV814725.1 Protein Homology CDS 173635 174570 . + 0 ID=cds-OFQ18844.1;Parent=gene-HMPREF2948_04895;Dbxref=NCBI_GP:OFQ18844.1;Name=OFQ18844.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QL89.1;locus_tag=HMPREF2948_04895;product=malate dehydrogenase;protein_id=OFQ18844.1;transl_table=11 KV814725.1 Genbank gene 174893 175840 . - . ID=gene-HMPREF2948_04900;Name=HMPREF2948_04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04900 KV814725.1 Protein Homology CDS 174893 175840 . - 0 ID=cds-OFQ18845.1;Parent=gene-HMPREF2948_04900;Dbxref=NCBI_GP:OFQ18845.1;Name=OFQ18845.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q7VL55.1;locus_tag=HMPREF2948_04900;product=ribose-phosphate pyrophosphokinase;protein_id=OFQ18845.1;transl_table=11 KV814725.1 Genbank gene 175842 176777 . - . ID=gene-HMPREF2948_04905;Name=HMPREF2948_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04905 KV814725.1 Protein Homology CDS 175842 176777 . - 0 ID=cds-OFQ18846.1;Parent=gene-HMPREF2948_04905;Dbxref=NCBI_GP:OFQ18846.1;Name=OFQ18846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695818.1;locus_tag=HMPREF2948_04905;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=OFQ18846.1;transl_table=11 KV814725.1 Genbank gene 176765 177388 . - . ID=gene-HMPREF2948_04910;Name=HMPREF2948_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04910 KV814725.1 Protein Homology CDS 176765 177388 . - 0 ID=cds-OFQ18847.1;Parent=gene-HMPREF2948_04910;Dbxref=NCBI_GP:OFQ18847.1;Name=OFQ18847.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664588.1;locus_tag=HMPREF2948_04910;product=lipoprotein localization factor LolB;protein_id=OFQ18847.1;transl_table=11 KV814725.1 Genbank gene 177453 178697 . - . ID=gene-HMPREF2948_04915;Name=cca;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=HMPREF2948_04915 KV814725.1 Protein Homology CDS 177453 178697 . - 0 ID=cds-OFQ18848.1;Parent=gene-HMPREF2948_04915;Dbxref=NCBI_GP:OFQ18848.1;Name=OFQ18848.1;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases;gbkey=CDS;gene=cca;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638084.1;locus_tag=HMPREF2948_04915;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=OFQ18848.1;transl_table=11 KV814725.1 Genbank gene 178759 179367 . - . ID=gene-HMPREF2948_04920;Name=HMPREF2948_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04920 KV814725.1 Protein Homology CDS 178759 179367 . - 0 ID=cds-OFQ18849.1;Parent=gene-HMPREF2948_04920;Dbxref=NCBI_GP:OFQ18849.1;Name=OFQ18849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869256.1;locus_tag=HMPREF2948_04920;product=hypothetical protein;protein_id=OFQ18849.1;transl_table=11 KV814725.1 Genbank gene 179433 180695 . - . ID=gene-HMPREF2948_04925;Name=HMPREF2948_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04925 KV814725.1 Protein Homology CDS 179433 180695 . - 0 ID=cds-OFQ18850.1;Parent=gene-HMPREF2948_04925;Dbxref=NCBI_GP:OFQ18850.1;Name=OFQ18850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014326204.1;locus_tag=HMPREF2948_04925;product=phosphate permease;protein_id=OFQ18850.1;transl_table=11 KV814725.1 Genbank gene 180731 181411 . - . ID=gene-HMPREF2948_04930;Name=HMPREF2948_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04930 KV814725.1 Protein Homology CDS 180731 181411 . - 0 ID=cds-OFQ18851.1;Parent=gene-HMPREF2948_04930;Dbxref=NCBI_GP:OFQ18851.1;Name=OFQ18851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44271.1;locus_tag=HMPREF2948_04930;product=phosphate transport regulator;protein_id=OFQ18851.1;transl_table=11 KV814725.1 Genbank gene 181615 182070 . + . ID=gene-HMPREF2948_04935;Name=HMPREF2948_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04935 KV814725.1 Protein Homology CDS 181615 182070 . + 0 ID=cds-OFQ18852.1;Parent=gene-HMPREF2948_04935;Dbxref=NCBI_GP:OFQ18852.1;Name=OFQ18852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005623840.1;locus_tag=HMPREF2948_04935;product=hypothetical protein;protein_id=OFQ18852.1;transl_table=11 KV814725.1 Genbank gene 182105 182341 . + . ID=gene-HMPREF2948_04940;Name=HMPREF2948_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04940 KV814725.1 Protein Homology CDS 182105 182341 . + 0 ID=cds-OFQ18853.1;Parent=gene-HMPREF2948_04940;Dbxref=NCBI_GP:OFQ18853.1;Name=OFQ18853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638075.1;locus_tag=HMPREF2948_04940;product=hypothetical protein;protein_id=OFQ18853.1;transl_table=11 KV814725.1 Genbank pseudogene 182419 183338 . + . ID=gene-HMPREF2948_04945;Name=HMPREF2948_04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_04945;pseudo=true KV814725.1 Protein Homology CDS 182419 183338 . + 0 ID=cds-HMPREF2948_04945;Parent=gene-HMPREF2948_04945;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707827.1;locus_tag=HMPREF2948_04945;product=hypothetical protein;pseudo=true;transl_table=11 KV814725.1 Genbank gene 183328 184044 . + . ID=gene-HMPREF2948_04950;Name=HMPREF2948_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04950 KV814725.1 Protein Homology CDS 183328 184044 . + 0 ID=cds-OFQ18854.1;Parent=gene-HMPREF2948_04950;Dbxref=NCBI_GP:OFQ18854.1;Name=OFQ18854.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005705863.1;locus_tag=HMPREF2948_04950;product=hypothetical protein;protein_id=OFQ18854.1;transl_table=11 KV814725.1 Genbank gene 184443 185480 . + . ID=gene-HMPREF2948_04955;Name=HMPREF2948_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04955 KV814725.1 Protein Homology CDS 184443 185480 . + 0 ID=cds-OFQ18855.1;Parent=gene-HMPREF2948_04955;Dbxref=NCBI_GP:OFQ18855.1;Name=OFQ18855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644914.1;locus_tag=HMPREF2948_04955;product=CYTH domain-containing protein;protein_id=OFQ18855.1;transl_table=11 KV814725.1 Genbank gene 185607 186986 . + . ID=gene-HMPREF2948_04960;Name=HMPREF2948_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04960 KV814725.1 Protein Homology CDS 185607 186986 . + 0 ID=cds-OFQ18856.1;Parent=gene-HMPREF2948_04960;Dbxref=NCBI_GP:OFQ18856.1;Name=OFQ18856.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644699.1;locus_tag=HMPREF2948_04960;product=DNA repair protein RadA;protein_id=OFQ18856.1;transl_table=11 KV814725.1 Genbank gene 187069 187548 . + . ID=gene-HMPREF2948_04965;Name=HMPREF2948_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04965 KV814725.1 Protein Homology CDS 187069 187548 . + 0 ID=cds-OFQ18857.1;Parent=gene-HMPREF2948_04965;Dbxref=NCBI_GP:OFQ18857.1;Name=OFQ18857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004734558.1;locus_tag=HMPREF2948_04965;product=transcriptional regulator;protein_id=OFQ18857.1;transl_table=11 KV814725.1 Genbank gene 187551 190340 . + . ID=gene-HMPREF2948_04970;Name=HMPREF2948_04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04970 KV814725.1 Protein Homology CDS 187551 190340 . + 0 ID=cds-OFQ18858.1;Parent=gene-HMPREF2948_04970;Dbxref=NCBI_GP:OFQ18858.1;Name=OFQ18858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695828.1;locus_tag=HMPREF2948_04970;product=cell division protein FtsK;protein_id=OFQ18858.1;transl_table=11 KV814725.1 Genbank gene 190377 191003 . + . ID=gene-HMPREF2948_04975;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=HMPREF2948_04975 KV814725.1 Protein Homology CDS 190377 191003 . + 0 ID=cds-OFQ18859.1;Parent=gene-HMPREF2948_04975;Dbxref=NCBI_GP:OFQ18859.1;Name=OFQ18859.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695829.1;locus_tag=HMPREF2948_04975;product=outer-membrane lipoprotein carrier protein LolA;protein_id=OFQ18859.1;transl_table=11 KV814725.1 Genbank gene 191057 192397 . + . ID=gene-HMPREF2948_04980;Name=HMPREF2948_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04980 KV814725.1 Protein Homology CDS 191057 192397 . + 0 ID=cds-OFQ18860.1;Parent=gene-HMPREF2948_04980;Dbxref=NCBI_GP:OFQ18860.1;Name=OFQ18860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550847.1;locus_tag=HMPREF2948_04980;product=recombination factor protein RarA;protein_id=OFQ18860.1;transl_table=11 KV814725.1 Genbank gene 192471 193553 . - . ID=gene-HMPREF2948_04985;Name=HMPREF2948_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04985 KV814725.1 Protein Homology CDS 192471 193553 . - 0 ID=cds-OFQ18861.1;Parent=gene-HMPREF2948_04985;Dbxref=NCBI_GP:OFQ18861.1;Name=OFQ18861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065177.1;locus_tag=HMPREF2948_04985;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=OFQ18861.1;transl_table=11 KV814725.1 Genbank gene 193690 194460 . - . ID=gene-HMPREF2948_04990;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=HMPREF2948_04990 KV814725.1 Protein Homology CDS 193690 194460 . - 0 ID=cds-OFQ18862.1;Parent=gene-HMPREF2948_04990;Dbxref=NCBI_GP:OFQ18862.1;Name=OFQ18862.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996068.1;locus_tag=HMPREF2948_04990;product=spermidine/putrescine ABC transporter permease PotC;protein_id=OFQ18862.1;transl_table=11 KV814725.1 Genbank gene 194460 195320 . - . ID=gene-HMPREF2948_04995;Name=HMPREF2948_04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_04995 KV814725.1 Protein Homology CDS 194460 195320 . - 0 ID=cds-OFQ18863.1;Parent=gene-HMPREF2948_04995;Dbxref=NCBI_GP:OFQ18863.1;Name=OFQ18863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698572.1;locus_tag=HMPREF2948_04995;product=spermidine/putrescine ABC transporter permease;protein_id=OFQ18863.1;transl_table=11 KV814725.1 Genbank gene 195304 196419 . - . ID=gene-HMPREF2948_05000;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=HMPREF2948_05000 KV814725.1 Protein Homology CDS 195304 196419 . - 0 ID=cds-OFQ18864.1;Parent=gene-HMPREF2948_05000;Dbxref=NCBI_GP:OFQ18864.1;Name=OFQ18864.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;gbkey=CDS;gene=potA;inference=EXISTENCE: similar to AA sequence:SwissProt:O85818.1;locus_tag=HMPREF2948_05000;product=putrescine/spermidine ABC transporter ATP-binding protein;protein_id=OFQ18864.1;transl_table=11 KV814725.1 Genbank gene 196696 197928 . + . ID=gene-HMPREF2948_05005;Name=HMPREF2948_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05005 KV814725.1 Protein Homology CDS 196696 197928 . + 0 ID=cds-OFQ18865.1;Parent=gene-HMPREF2948_05005;Dbxref=NCBI_GP:OFQ18865.1;Name=OFQ18865.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698590.1;locus_tag=HMPREF2948_05005;product=peptidase T;protein_id=OFQ18865.1;transl_table=11 KV814725.1 Genbank gene 198094 198723 . - . ID=gene-HMPREF2948_05010;Name=HMPREF2948_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05010 KV814725.1 Protein Homology CDS 198094 198723 . - 0 ID=cds-OFQ18866.1;Parent=gene-HMPREF2948_05010;Dbxref=NCBI_GP:OFQ18866.1;Name=OFQ18866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691873.1;locus_tag=HMPREF2948_05010;product=MBL fold metallo-hydrolase;protein_id=OFQ18866.1;transl_table=11 KV814725.1 Genbank gene 198788 199348 . - . ID=gene-HMPREF2948_05015;Name=HMPREF2948_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05015 KV814725.1 Protein Homology CDS 198788 199348 . - 0 ID=cds-OFQ18867.1;Parent=gene-HMPREF2948_05015;Dbxref=NCBI_GP:OFQ18867.1;Name=OFQ18867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065183.1;locus_tag=HMPREF2948_05015;product=hypothetical protein;protein_id=OFQ18867.1;transl_table=11 KV814725.1 Genbank gene 199423 200892 . - . ID=gene-HMPREF2948_05020;Name=HMPREF2948_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05020 KV814725.1 Protein Homology CDS 199423 200892 . - 0 ID=cds-OFQ18883.1;Parent=gene-HMPREF2948_05020;Dbxref=NCBI_GP:OFQ18883.1;Name=OFQ18883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644787.1;locus_tag=HMPREF2948_05020;product=L%2CD-transpeptidase;protein_id=OFQ18883.1;transl_table=11 KV814725.1 Genbank gene 200973 203042 . - . ID=gene-HMPREF2948_05025;Name=HMPREF2948_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05025 KV814725.1 Protein Homology CDS 200973 203042 . - 0 ID=cds-OFQ18868.1;Parent=gene-HMPREF2948_05025;Dbxref=NCBI_GP:OFQ18868.1;Name=OFQ18868.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695841.1;locus_tag=HMPREF2948_05025;product=tail-specific protease;protein_id=OFQ18868.1;transl_table=11 KV814725.1 Genbank gene 203072 203719 . - . ID=gene-HMPREF2948_05030;Name=HMPREF2948_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05030 KV814725.1 Protein Homology CDS 203072 203719 . - 0 ID=cds-OFQ18869.1;Parent=gene-HMPREF2948_05030;Dbxref=NCBI_GP:OFQ18869.1;Name=OFQ18869.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628442.1;locus_tag=HMPREF2948_05030;product=RNA chaperone ProQ;protein_id=OFQ18869.1;transl_table=11 KV814725.1 Genbank gene 203890 205143 . + . ID=gene-HMPREF2948_05035;Name=HMPREF2948_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05035 KV814725.1 Protein Homology CDS 203890 205143 . + 0 ID=cds-OFQ18870.1;Parent=gene-HMPREF2948_05035;Dbxref=NCBI_GP:OFQ18870.1;Name=OFQ18870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005570503.1;locus_tag=HMPREF2948_05035;product=hypothetical protein;protein_id=OFQ18870.1;transl_table=11 KV814725.1 Genbank gene 205127 207784 . + . ID=gene-HMPREF2948_05040;Name=HMPREF2948_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05040 KV814725.1 Protein Homology CDS 205127 207784 . + 0 ID=cds-OFQ18871.1;Parent=gene-HMPREF2948_05040;Dbxref=NCBI_GP:OFQ18871.1;Name=OFQ18871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065188.1;locus_tag=HMPREF2948_05040;product=hypothetical protein;protein_id=OFQ18871.1;transl_table=11 KV814725.1 Genbank gene 207855 208400 . - . ID=gene-HMPREF2948_05045;Name=HMPREF2948_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05045 KV814725.1 Protein Homology CDS 207855 208400 . - 0 ID=cds-OFQ18872.1;Parent=gene-HMPREF2948_05045;Dbxref=NCBI_GP:OFQ18872.1;Name=OFQ18872.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698574.1;locus_tag=HMPREF2948_05045;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=OFQ18872.1;transl_table=11 KV814725.1 Genbank gene 208400 209335 . - . ID=gene-HMPREF2948_05050;Name=HMPREF2948_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05050 KV814725.1 Protein Homology CDS 208400 209335 . - 0 ID=cds-OFQ18873.1;Parent=gene-HMPREF2948_05050;Dbxref=NCBI_GP:OFQ18873.1;Name=OFQ18873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005687393.1;locus_tag=HMPREF2948_05050;product=arabinose-5-phosphate isomerase;protein_id=OFQ18873.1;transl_table=11 KV814725.1 Genbank gene 209460 209836 . + . ID=gene-HMPREF2948_05055;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=HMPREF2948_05055 KV814725.1 cmsearch RNase_P_RNA 209460 209836 . + . ID=rna-HMPREF2948_05055;Parent=gene-HMPREF2948_05055;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_05055;product=RNase P RNA component class A KV814725.1 cmsearch exon 209460 209836 . + . ID=exon-HMPREF2948_05055-1;Parent=rna-HMPREF2948_05055;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_05055;product=RNase P RNA component class A KV814725.1 Genbank gene 209924 210991 . - . ID=gene-HMPREF2948_05060;Name=HMPREF2948_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05060 KV814725.1 Protein Homology CDS 209924 210991 . - 0 ID=cds-OFQ18874.1;Parent=gene-HMPREF2948_05060;Dbxref=NCBI_GP:OFQ18874.1;Name=OFQ18874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500619.1;locus_tag=HMPREF2948_05060;product=DNA polymerase IV;protein_id=OFQ18874.1;transl_table=11 KV814725.1 Genbank gene 211057 211578 . - . ID=gene-HMPREF2948_05065;Name=HMPREF2948_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05065 KV814725.1 Protein Homology CDS 211057 211578 . - 0 ID=cds-OFQ18875.1;Parent=gene-HMPREF2948_05065;Dbxref=NCBI_GP:OFQ18875.1;Name=OFQ18875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638005.1;locus_tag=HMPREF2948_05065;product=hypothetical protein;protein_id=OFQ18875.1;transl_table=11 KV814725.1 Genbank gene 211685 212050 . + . ID=gene-HMPREF2948_05070;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=HMPREF2948_05070 KV814725.1 cmsearch tmRNA 211685 212050 . + . ID=rna-HMPREF2948_05070;Parent=gene-HMPREF2948_05070;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_05070;product=transfer-messenger RNA KV814725.1 cmsearch exon 211685 212050 . + . ID=exon-HMPREF2948_05070-1;Parent=rna-HMPREF2948_05070;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_05070;product=transfer-messenger RNA KV814725.1 Genbank gene 212251 212829 . + . ID=gene-HMPREF2948_05075;Name=HMPREF2948_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05075 KV814725.1 Protein Homology CDS 212251 212829 . + 0 ID=cds-OFQ18876.1;Parent=gene-HMPREF2948_05075;Dbxref=NCBI_GP:OFQ18876.1;Name=OFQ18876.1;Note=involved in drug resistance;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44803.1;locus_tag=HMPREF2948_05075;product=NADPH quinone reductase MdaB;protein_id=OFQ18876.1;transl_table=11 KV814725.1 Genbank gene 213012 213965 . - . ID=gene-HMPREF2948_05080;Name=HMPREF2948_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05080 KV814725.1 Protein Homology CDS 213012 213965 . - 0 ID=cds-OFQ18877.1;Parent=gene-HMPREF2948_05080;Dbxref=NCBI_GP:OFQ18877.1;Name=OFQ18877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523665.1;locus_tag=HMPREF2948_05080;product=AraC family transcriptional regulator;protein_id=OFQ18877.1;transl_table=11 KV814725.1 Genbank gene 214109 214960 . + . ID=gene-HMPREF2948_05085;Name=HMPREF2948_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05085 KV814725.1 Protein Homology CDS 214109 214960 . + 0 ID=cds-OFQ18878.1;Parent=gene-HMPREF2948_05085;Dbxref=NCBI_GP:OFQ18878.1;Name=OFQ18878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523751.1;locus_tag=HMPREF2948_05085;product=hypothetical protein;protein_id=OFQ18878.1;transl_table=11 KV814725.1 Genbank gene 215404 215685 . + . ID=gene-HMPREF2948_05090;Name=HMPREF2948_05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05090 KV814725.1 GeneMarkS+ CDS 215404 215685 . + 0 ID=cds-OFQ18879.1;Parent=gene-HMPREF2948_05090;Dbxref=NCBI_GP:OFQ18879.1;Name=OFQ18879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05090;product=hypothetical protein;protein_id=OFQ18879.1;transl_table=11 KV814725.1 Genbank gene 215697 216713 . + . ID=gene-HMPREF2948_05095;Name=HMPREF2948_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05095 KV814725.1 Protein Homology CDS 215697 216713 . + 0 ID=cds-OFQ18880.1;Parent=gene-HMPREF2948_05095;Dbxref=NCBI_GP:OFQ18880.1;Name=OFQ18880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002256967.1;locus_tag=HMPREF2948_05095;product=hypothetical protein;protein_id=OFQ18880.1;transl_table=11 ##sequence-region KV814726.1 1 1398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814726.1 Genbank region 1 1398 . + . ID=KV814726.1:1..1398;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814726.1 Genbank gene 1 1348 . + . ID=gene-HMPREF2948_05100;Name=HMPREF2948_05100;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_05100;partial=true;start_range=.,1 KV814726.1 Genbank rRNA 1 1348 . + . ID=rna-HMPREF2948_05100;Parent=gene-HMPREF2948_05100;gbkey=rRNA;locus_tag=HMPREF2948_05100;partial=true;product=16S ribosomal RNA;start_range=.,1 KV814726.1 Genbank exon 1 1348 . + . ID=exon-HMPREF2948_05100-1;Parent=rna-HMPREF2948_05100;gbkey=rRNA;locus_tag=HMPREF2948_05100;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region KV814727.1 1 1236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814727.1 Genbank region 1 1236 . + . ID=KV814727.1:1..1236;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814727.1 Genbank pseudogene 1 1236 . - . ID=gene-HMPREF2948_05105;Name=HMPREF2948_05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_05105;pseudo=true KV814727.1 GeneMarkS+ CDS 1 1236 . - 2 ID=cds-HMPREF2948_05105;Parent=gene-HMPREF2948_05105;Note=incomplete%3B too short partial abutting assembly gap%3B missing start and stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05105;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV814728.1 1 2106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814728.1 Genbank region 1 2106 . + . ID=KV814728.1:1..2106;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814728.1 Genbank gene 102 347 . + . ID=gene-HMPREF2948_05110;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=HMPREF2948_05110 KV814728.1 Protein Homology CDS 102 347 . + 0 ID=cds-OFQ18682.1;Parent=gene-HMPREF2948_05110;Dbxref=NCBI_GP:OFQ18682.1;Name=OFQ18682.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;inference=EXISTENCE: similar to AA sequence:SwissProt:P44382.1;locus_tag=HMPREF2948_05110;product=30S ribosomal protein S16;protein_id=OFQ18682.1;transl_table=11 KV814728.1 Genbank gene 392 919 . + . ID=gene-HMPREF2948_05115;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=HMPREF2948_05115 KV814728.1 Protein Homology CDS 392 919 . + 0 ID=cds-OFQ18683.1;Parent=gene-HMPREF2948_05115;Dbxref=NCBI_GP:OFQ18683.1;Name=OFQ18683.1;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626427.1;locus_tag=HMPREF2948_05115;product=ribosome maturation factor RimM;protein_id=OFQ18683.1;transl_table=11 KV814728.1 Genbank gene 957 1697 . + . ID=gene-HMPREF2948_05120;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=HMPREF2948_05120 KV814728.1 Protein Homology CDS 957 1697 . + 0 ID=cds-OFQ18684.1;Parent=gene-HMPREF2948_05120;Dbxref=NCBI_GP:OFQ18684.1;Name=OFQ18684.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661387.1;locus_tag=HMPREF2948_05120;product=tRNA (guanine(37)-N(1))-methyltransferase;protein_id=OFQ18684.1;transl_table=11 KV814728.1 Genbank gene 1734 2084 . + . ID=gene-HMPREF2948_05125;Name=HMPREF2948_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05125 KV814728.1 Protein Homology CDS 1734 2084 . + 0 ID=cds-OFQ18685.1;Parent=gene-HMPREF2948_05125;Dbxref=NCBI_GP:OFQ18685.1;Name=OFQ18685.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356448.1;locus_tag=HMPREF2948_05125;product=50S ribosomal protein L19;protein_id=OFQ18685.1;transl_table=11 ##sequence-region KV814729.1 1 52635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814729.1 Genbank region 1 52635 . + . ID=KV814729.1:1..52635;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814729.1 Genbank pseudogene 1 151 . - . ID=gene-HMPREF2948_05130;Name=HMPREF2948_05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_05130;pseudo=true KV814729.1 Protein Homology CDS 1 151 . - 0 ID=cds-HMPREF2948_05130;Parent=gene-HMPREF2948_05130;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690296.1;locus_tag=HMPREF2948_05130;product=transcriptional regulator;pseudo=true;transl_table=11 KV814729.1 Genbank gene 235 1074 . - . ID=gene-HMPREF2948_05135;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=HMPREF2948_05135 KV814729.1 Protein Homology CDS 235 1074 . - 0 ID=cds-OFQ18616.1;Parent=gene-HMPREF2948_05135;Dbxref=NCBI_GP:OFQ18616.1;Name=OFQ18616.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694533.1;locus_tag=HMPREF2948_05135;product=preQ(1) synthase;protein_id=OFQ18616.1;transl_table=11 KV814729.1 Genbank gene 1099 1884 . - . ID=gene-HMPREF2948_05140;Name=HMPREF2948_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05140 KV814729.1 Protein Homology CDS 1099 1884 . - 0 ID=cds-OFQ18617.1;Parent=gene-HMPREF2948_05140;Dbxref=NCBI_GP:OFQ18617.1;Name=OFQ18617.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694477.1;locus_tag=HMPREF2948_05140;product=hypothetical protein;protein_id=OFQ18617.1;transl_table=11 KV814729.1 Genbank gene 1887 2261 . - . ID=gene-HMPREF2948_05145;Name=HMPREF2948_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05145 KV814729.1 Protein Homology CDS 1887 2261 . - 0 ID=cds-OFQ18618.1;Parent=gene-HMPREF2948_05145;Dbxref=NCBI_GP:OFQ18618.1;Name=OFQ18618.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44156.3;locus_tag=HMPREF2948_05145;product=hypothetical protein;protein_id=OFQ18618.1;transl_table=11 KV814729.1 Genbank gene 2255 3457 . - . ID=gene-HMPREF2948_05150;Name=HMPREF2948_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05150 KV814729.1 Protein Homology CDS 2255 3457 . - 0 ID=cds-OFQ18619.1;Parent=gene-HMPREF2948_05150;Dbxref=NCBI_GP:OFQ18619.1;Name=OFQ18619.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243428.1;locus_tag=HMPREF2948_05150;product=cysteine desulfurase;protein_id=OFQ18619.1;transl_table=11 KV814729.1 Genbank gene 3447 3962 . - . ID=gene-HMPREF2948_05155;Name=HMPREF2948_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05155 KV814729.1 Protein Homology CDS 3447 3962 . - 0 ID=cds-OFQ18620.1;Parent=gene-HMPREF2948_05155;Dbxref=NCBI_GP:OFQ18620.1;Name=OFQ18620.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702181.1;locus_tag=HMPREF2948_05155;product=nuclease;protein_id=OFQ18620.1;transl_table=11 KV814729.1 Genbank gene 4075 4491 . + . ID=gene-HMPREF2948_05160;Name=HMPREF2948_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05160 KV814729.1 Protein Homology CDS 4075 4491 . + 0 ID=cds-OFQ18621.1;Parent=gene-HMPREF2948_05160;Dbxref=NCBI_GP:OFQ18621.1;Name=OFQ18621.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699041.1;locus_tag=HMPREF2948_05160;product=hypothetical protein;protein_id=OFQ18621.1;transl_table=11 KV814729.1 Genbank gene 4498 5193 . + . ID=gene-HMPREF2948_05165;Name=HMPREF2948_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05165 KV814729.1 Protein Homology CDS 4498 5193 . + 0 ID=cds-OFQ18622.1;Parent=gene-HMPREF2948_05165;Dbxref=NCBI_GP:OFQ18622.1;Name=OFQ18622.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628646.1;locus_tag=HMPREF2948_05165;product=CidB/LrgB family autolysis modulator;protein_id=OFQ18622.1;transl_table=11 KV814729.1 Genbank gene 5190 6542 . + . ID=gene-HMPREF2948_05170;Name=HMPREF2948_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05170 KV814729.1 Protein Homology CDS 5190 6542 . + 0 ID=cds-OFQ18623.1;Parent=gene-HMPREF2948_05170;Dbxref=NCBI_GP:OFQ18623.1;Name=OFQ18623.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538151.1;locus_tag=HMPREF2948_05170;product=dGTPase;protein_id=OFQ18623.1;transl_table=11 KV814729.1 Genbank gene 6588 8531 . + . ID=gene-HMPREF2948_05175;Name=HMPREF2948_05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05175 KV814729.1 Protein Homology CDS 6588 8531 . + 0 ID=cds-OFQ18624.1;Parent=gene-HMPREF2948_05175;Dbxref=NCBI_GP:OFQ18624.1;Name=OFQ18624.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005579099.1;locus_tag=HMPREF2948_05175;product=ABC transporter ATP-binding protein;protein_id=OFQ18624.1;transl_table=11 KV814729.1 Genbank pseudogene 8960 9796 . + . ID=gene-HMPREF2948_05180;Name=HMPREF2948_05180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_05180;pseudo=true KV814729.1 Protein Homology CDS 8960 9796 . + 0 ID=cds-HMPREF2948_05180;Parent=gene-HMPREF2948_05180;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500478.1;locus_tag=HMPREF2948_05180;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 KV814729.1 Genbank gene 9774 10331 . - . ID=gene-HMPREF2948_05185;Name=HMPREF2948_05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05185 KV814729.1 Protein Homology CDS 9774 10331 . - 0 ID=cds-OFQ18625.1;Parent=gene-HMPREF2948_05185;Dbxref=NCBI_GP:OFQ18625.1;Name=OFQ18625.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637801.1;locus_tag=HMPREF2948_05185;product=phosphatidylethanolamine-binding protein;protein_id=OFQ18625.1;transl_table=11 KV814729.1 Genbank gene 10748 12121 . - . ID=gene-HMPREF2948_05190;Name=HMPREF2948_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05190 KV814729.1 Protein Homology CDS 10748 12121 . - 0 ID=cds-OFQ18626.1;Parent=gene-HMPREF2948_05190;Dbxref=NCBI_GP:OFQ18626.1;Name=OFQ18626.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014325880.1;locus_tag=HMPREF2948_05190;product=transporter;protein_id=OFQ18626.1;transl_table=11 KV814729.1 Genbank gene 12148 12783 . - . ID=gene-HMPREF2948_05195;Name=HMPREF2948_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05195 KV814729.1 Protein Homology CDS 12148 12783 . - 0 ID=cds-OFQ18627.1;Parent=gene-HMPREF2948_05195;Dbxref=NCBI_GP:OFQ18627.1;Name=OFQ18627.1;Note=DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355685.1;locus_tag=HMPREF2948_05195;product=endonuclease III;protein_id=OFQ18627.1;transl_table=11 KV814729.1 Genbank gene 12780 13490 . - . ID=gene-HMPREF2948_05200;Name=HMPREF2948_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05200 KV814729.1 Protein Homology CDS 12780 13490 . - 0 ID=cds-OFQ18628.1;Parent=gene-HMPREF2948_05200;Dbxref=NCBI_GP:OFQ18628.1;Name=OFQ18628.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995820.1;locus_tag=HMPREF2948_05200;product=electron transport complex subunit RsxE;protein_id=OFQ18628.1;transl_table=11 KV814729.1 Genbank gene 13501 14127 . - . ID=gene-HMPREF2948_05205;Name=HMPREF2948_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05205 KV814729.1 Protein Homology CDS 13501 14127 . - 0 ID=cds-OFQ18629.1;Parent=gene-HMPREF2948_05205;Dbxref=NCBI_GP:OFQ18629.1;Name=OFQ18629.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696038.1;locus_tag=HMPREF2948_05205;product=electron transport complex subunit G;protein_id=OFQ18629.1;transl_table=11 KV814729.1 Genbank gene 14127 15209 . - . ID=gene-HMPREF2948_05210;Name=rnfD;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=HMPREF2948_05210 KV814729.1 Protein Homology CDS 14127 15209 . - 0 ID=cds-OFQ18630.1;Parent=gene-HMPREF2948_05210;Dbxref=NCBI_GP:OFQ18630.1;Name=OFQ18630.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658204.1;locus_tag=HMPREF2948_05210;product=electron transport complex subunit D;protein_id=OFQ18630.1;transl_table=11 KV814729.1 Genbank gene 15224 17284 . - . ID=gene-HMPREF2948_05215;Name=HMPREF2948_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05215 KV814729.1 Protein Homology CDS 15224 17284 . - 0 ID=cds-OFQ18631.1;Parent=gene-HMPREF2948_05215;Dbxref=NCBI_GP:OFQ18631.1;Name=OFQ18631.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718499.1;locus_tag=HMPREF2948_05215;product=electron transport complex subunit RsxC;protein_id=OFQ18631.1;transl_table=11 KV814729.1 Genbank gene 17277 17870 . - . ID=gene-HMPREF2948_05220;Name=HMPREF2948_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05220 KV814729.1 Protein Homology CDS 17277 17870 . - 0 ID=cds-OFQ18632.1;Parent=gene-HMPREF2948_05220;Dbxref=NCBI_GP:OFQ18632.1;Name=OFQ18632.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065343.1;locus_tag=HMPREF2948_05220;product=electron transport complex subunit RsxB;protein_id=OFQ18632.1;transl_table=11 KV814729.1 Genbank gene 17941 18519 . - . ID=gene-HMPREF2948_05225;Name=HMPREF2948_05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05225 KV814729.1 Protein Homology CDS 17941 18519 . - 0 ID=cds-OFQ18633.1;Parent=gene-HMPREF2948_05225;Dbxref=NCBI_GP:OFQ18633.1;Name=OFQ18633.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I487.1;locus_tag=HMPREF2948_05225;product=electron transport complex subunit A;protein_id=OFQ18633.1;transl_table=11 KV814729.1 Genbank gene 18621 20774 . - . ID=gene-HMPREF2948_05230;Name=HMPREF2948_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05230 KV814729.1 Protein Homology CDS 18621 20774 . - 0 ID=cds-OFQ18634.1;Parent=gene-HMPREF2948_05230;Dbxref=NCBI_GP:OFQ18634.1;Name=OFQ18634.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699018.1;locus_tag=HMPREF2948_05230;product=hypothetical protein;protein_id=OFQ18634.1;transl_table=11 KV814729.1 Genbank gene 20869 21525 . - . ID=gene-HMPREF2948_05235;Name=HMPREF2948_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05235 KV814729.1 Protein Homology CDS 20869 21525 . - 0 ID=cds-OFQ18635.1;Parent=gene-HMPREF2948_05235;Dbxref=NCBI_GP:OFQ18635.1;Name=OFQ18635.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CNN2.1;locus_tag=HMPREF2948_05235;product=hypothetical protein;protein_id=OFQ18635.1;transl_table=11 KV814729.1 Genbank gene 21644 21916 . + . ID=gene-HMPREF2948_05240;Name=HMPREF2948_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05240 KV814729.1 Protein Homology CDS 21644 21916 . + 0 ID=cds-OFQ18636.1;Parent=gene-HMPREF2948_05240;Dbxref=NCBI_GP:OFQ18636.1;Name=OFQ18636.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005565935.1;locus_tag=HMPREF2948_05240;product=acylphosphatase;protein_id=OFQ18636.1;transl_table=11 KV814729.1 Genbank gene 21987 22307 . + . ID=gene-HMPREF2948_05245;Name=HMPREF2948_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05245 KV814729.1 Protein Homology CDS 21987 22307 . + 0 ID=cds-OFQ18637.1;Parent=gene-HMPREF2948_05245;Dbxref=NCBI_GP:OFQ18637.1;Name=OFQ18637.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718361.1;locus_tag=HMPREF2948_05245;product=anhydro-N-acetylmuramic acid kinase;protein_id=OFQ18637.1;transl_table=11 KV814729.1 Genbank gene 22308 23024 . + . ID=gene-HMPREF2948_05250;Name=HMPREF2948_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05250 KV814729.1 Protein Homology CDS 22308 23024 . + 0 ID=cds-OFQ18638.1;Parent=gene-HMPREF2948_05250;Dbxref=NCBI_GP:OFQ18638.1;Name=OFQ18638.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696047.1;locus_tag=HMPREF2948_05250;product=tRNA pseudouridine(65) synthase TruC;protein_id=OFQ18638.1;transl_table=11 KV814729.1 Genbank gene 23037 23201 . + . ID=gene-HMPREF2948_05255;Name=HMPREF2948_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05255 KV814729.1 Protein Homology CDS 23037 23201 . + 0 ID=cds-OFQ18639.1;Parent=gene-HMPREF2948_05255;Dbxref=NCBI_GP:OFQ18639.1;Name=OFQ18639.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065348.1;locus_tag=HMPREF2948_05255;product=hypothetical protein;protein_id=OFQ18639.1;transl_table=11 KV814729.1 Genbank gene 23348 23557 . + . ID=gene-HMPREF2948_05260;Name=HMPREF2948_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05260 KV814729.1 Protein Homology CDS 23348 23557 . + 0 ID=cds-OFQ18640.1;Parent=gene-HMPREF2948_05260;Dbxref=NCBI_GP:OFQ18640.1;Name=OFQ18640.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005762262.1;locus_tag=HMPREF2948_05260;product=cold shock domain protein CspD;protein_id=OFQ18640.1;transl_table=11 KV814729.1 Genbank gene 23639 24088 . - . ID=gene-HMPREF2948_05265;Name=HMPREF2948_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05265 KV814729.1 Protein Homology CDS 23639 24088 . - 0 ID=cds-OFQ18641.1;Parent=gene-HMPREF2948_05265;Dbxref=NCBI_GP:OFQ18641.1;Name=OFQ18641.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699031.1;locus_tag=HMPREF2948_05265;product=macrodomain Ter protein;protein_id=OFQ18641.1;transl_table=11 KV814729.1 Genbank gene 24191 25993 . + . ID=gene-HMPREF2948_05270;Name=HMPREF2948_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05270 KV814729.1 Protein Homology CDS 24191 25993 . + 0 ID=cds-OFQ18642.1;Parent=gene-HMPREF2948_05270;Dbxref=NCBI_GP:OFQ18642.1;Name=OFQ18642.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698950.1;locus_tag=HMPREF2948_05270;product=peptidase;protein_id=OFQ18642.1;transl_table=11 KV814729.1 Genbank gene 26161 26694 . + . ID=gene-HMPREF2948_05275;Name=HMPREF2948_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05275 KV814729.1 Protein Homology CDS 26161 26694 . + 0 ID=cds-OFQ18643.1;Parent=gene-HMPREF2948_05275;Dbxref=NCBI_GP:OFQ18643.1;Name=OFQ18643.1;Note=catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650386.1;locus_tag=HMPREF2948_05275;product=beta-hydroxydecanoyl-ACP dehydratase;protein_id=OFQ18643.1;transl_table=11 KV814729.1 Genbank gene 26754 27233 . - . ID=gene-HMPREF2948_05280;Name=HMPREF2948_05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05280 KV814729.1 Protein Homology CDS 26754 27233 . - 0 ID=cds-OFQ18644.1;Parent=gene-HMPREF2948_05280;Dbxref=NCBI_GP:OFQ18644.1;Name=OFQ18644.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698995.1;locus_tag=HMPREF2948_05280;product=aminoacyl-tRNA deacylase;protein_id=OFQ18644.1;transl_table=11 KV814729.1 Genbank gene 27310 28263 . + . ID=gene-HMPREF2948_05285;Name=HMPREF2948_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05285 KV814729.1 Protein Homology CDS 27310 28263 . + 0 ID=cds-OFQ18645.1;Parent=gene-HMPREF2948_05285;Dbxref=NCBI_GP:OFQ18645.1;Name=OFQ18645.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660359.1;locus_tag=HMPREF2948_05285;product=aspartate-semialdehyde dehydrogenase;protein_id=OFQ18645.1;transl_table=11 KV814729.1 Genbank gene 28284 29591 . + . ID=gene-HMPREF2948_05290;Name=HMPREF2948_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05290 KV814729.1 Protein Homology CDS 28284 29591 . + 0 ID=cds-OFQ18646.1;Parent=gene-HMPREF2948_05290;Dbxref=NCBI_GP:OFQ18646.1;Name=OFQ18646.1;Note=involved in the transport or adenine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065353.1;locus_tag=HMPREF2948_05290;product=adenine permease PurP;protein_id=OFQ18646.1;transl_table=11 KV814729.1 Genbank gene 29652 30008 . + . ID=gene-HMPREF2948_05295;Name=HMPREF2948_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05295 KV814729.1 Protein Homology CDS 29652 30008 . + 0 ID=cds-OFQ18647.1;Parent=gene-HMPREF2948_05295;Dbxref=NCBI_GP:OFQ18647.1;Name=OFQ18647.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011200196.1;locus_tag=HMPREF2948_05295;product=hypothetical protein;protein_id=OFQ18647.1;transl_table=11 KV814729.1 Genbank gene 30088 33216 . - . ID=gene-HMPREF2948_05300;Name=HMPREF2948_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05300 KV814729.1 Protein Homology CDS 30088 33216 . - 0 ID=cds-OFQ18648.1;Parent=gene-HMPREF2948_05300;Dbxref=NCBI_GP:OFQ18648.1;Name=OFQ18648.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271929.1;locus_tag=HMPREF2948_05300;product=DEAD/DEAH box helicase;protein_id=OFQ18648.1;transl_table=11 KV814729.1 Genbank gene 33254 34417 . - . ID=gene-HMPREF2948_05305;Name=HMPREF2948_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05305 KV814729.1 Protein Homology CDS 33254 34417 . - 0 ID=cds-OFQ18649.1;Parent=gene-HMPREF2948_05305;Dbxref=NCBI_GP:OFQ18649.1;Name=OFQ18649.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696064.1;locus_tag=HMPREF2948_05305;product=restriction endonuclease subunit S;protein_id=OFQ18649.1;transl_table=11 KV814729.1 Genbank gene 34425 35978 . - . ID=gene-HMPREF2948_05310;Name=HMPREF2948_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05310 KV814729.1 Protein Homology CDS 34425 35978 . - 0 ID=cds-OFQ18650.1;Parent=gene-HMPREF2948_05310;Dbxref=NCBI_GP:OFQ18650.1;Name=OFQ18650.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648764.1;locus_tag=HMPREF2948_05310;product=restriction endonuclease;protein_id=OFQ18650.1;transl_table=11 KV814729.1 Genbank gene 36116 39757 . + . ID=gene-HMPREF2948_05315;Name=HMPREF2948_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05315 KV814729.1 Protein Homology CDS 36116 39757 . + 0 ID=cds-OFQ18651.1;Parent=gene-HMPREF2948_05315;Dbxref=NCBI_GP:OFQ18651.1;Name=OFQ18651.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696066.1;locus_tag=HMPREF2948_05315;product=exodeoxyribonuclease V subunit beta;protein_id=OFQ18651.1;transl_table=11 KV814729.1 Genbank gene 39757 41691 . + . ID=gene-HMPREF2948_05320;Name=HMPREF2948_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05320 KV814729.1 Protein Homology CDS 39757 41691 . + 0 ID=cds-OFQ18652.1;Parent=gene-HMPREF2948_05320;Dbxref=NCBI_GP:OFQ18652.1;Name=OFQ18652.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699063.1;locus_tag=HMPREF2948_05320;product=exodeoxyribonuclease V subunit alpha;protein_id=OFQ18652.1;transl_table=11 KV814729.1 Genbank gene 41695 42342 . + . ID=gene-HMPREF2948_05325;Name=HMPREF2948_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05325 KV814729.1 Protein Homology CDS 41695 42342 . + 0 ID=cds-OFQ18653.1;Parent=gene-HMPREF2948_05325;Dbxref=NCBI_GP:OFQ18653.1;Name=OFQ18653.1;Note=cofactor involved in the reduction of disulfides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524214.1;locus_tag=HMPREF2948_05325;product=glutaredoxin;protein_id=OFQ18653.1;transl_table=11 KV814729.1 Genbank gene 42470 43240 . + . ID=gene-HMPREF2948_05330;Name=HMPREF2948_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05330 KV814729.1 Protein Homology CDS 42470 43240 . + 0 ID=cds-OFQ18654.1;Parent=gene-HMPREF2948_05330;Dbxref=NCBI_GP:OFQ18654.1;Name=OFQ18654.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005765109.1;locus_tag=HMPREF2948_05330;product=hypothetical protein;protein_id=OFQ18654.1;transl_table=11 KV814729.1 Genbank gene 43245 43706 . + . ID=gene-HMPREF2948_05335;Name=HMPREF2948_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05335 KV814729.1 Protein Homology CDS 43245 43706 . + 0 ID=cds-OFQ18655.1;Parent=gene-HMPREF2948_05335;Dbxref=NCBI_GP:OFQ18655.1;Name=OFQ18655.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524688.1;locus_tag=HMPREF2948_05335;product=hypothetical protein;protein_id=OFQ18655.1;transl_table=11 KV814729.1 Genbank gene 43757 44239 . - . ID=gene-HMPREF2948_05340;Name=HMPREF2948_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05340 KV814729.1 Protein Homology CDS 43757 44239 . - 0 ID=cds-OFQ18656.1;Parent=gene-HMPREF2948_05340;Dbxref=NCBI_GP:OFQ18656.1;Name=OFQ18656.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629322.1;locus_tag=HMPREF2948_05340;product=DNA starvation/stationary phase protection protein;protein_id=OFQ18656.1;transl_table=11 KV814729.1 Genbank pseudogene 44719 45518 . + . ID=gene-HMPREF2948_05345;Name=HMPREF2948_05345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_05345;pseudo=true KV814729.1 Protein Homology CDS 44719 45518 . + 0 ID=cds-HMPREF2948_05345;Parent=gene-HMPREF2948_05345;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005607964.1;locus_tag=HMPREF2948_05345;product=ABC transporter;pseudo=true;transl_table=11 KV814729.1 Genbank gene 45683 46558 . + . ID=gene-HMPREF2948_05350;Name=HMPREF2948_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05350 KV814729.1 Protein Homology CDS 45683 46558 . + 0 ID=cds-OFQ18657.1;Parent=gene-HMPREF2948_05350;Dbxref=NCBI_GP:OFQ18657.1;Name=OFQ18657.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694010.1;locus_tag=HMPREF2948_05350;product=cytidine deaminase;protein_id=OFQ18657.1;transl_table=11 KV814729.1 Genbank gene 46645 48918 . - . ID=gene-HMPREF2948_05355;Name=HMPREF2948_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05355 KV814729.1 Protein Homology CDS 46645 48918 . - 0 ID=cds-OFQ18658.1;Parent=gene-HMPREF2948_05355;Dbxref=NCBI_GP:OFQ18658.1;Name=OFQ18658.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0UU16.1;locus_tag=HMPREF2948_05355;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=OFQ18658.1;transl_table=11 KV814729.1 Genbank gene 49106 49366 . - . ID=gene-HMPREF2948_05360;Name=HMPREF2948_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05360 KV814729.1 Protein Homology CDS 49106 49366 . - 0 ID=cds-OFQ18659.1;Parent=gene-HMPREF2948_05360;Dbxref=NCBI_GP:OFQ18659.1;Name=OFQ18659.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524603.1;locus_tag=HMPREF2948_05360;product=hypothetical protein;protein_id=OFQ18659.1;transl_table=11 KV814729.1 Genbank gene 49556 49885 . - . ID=gene-HMPREF2948_05365;Name=HMPREF2948_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05365 KV814729.1 Protein Homology CDS 49556 49885 . - 0 ID=cds-OFQ18660.1;Parent=gene-HMPREF2948_05365;Dbxref=NCBI_GP:OFQ18660.1;Name=OFQ18660.1;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005721637.1;locus_tag=HMPREF2948_05365;product=sulfur relay protein TusE;protein_id=OFQ18660.1;transl_table=11 KV814729.1 Genbank gene 49887 50816 . - . ID=gene-HMPREF2948_05370;Name=HMPREF2948_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05370 KV814729.1 Protein Homology CDS 49887 50816 . - 0 ID=cds-OFQ18661.1;Parent=gene-HMPREF2948_05370;Dbxref=NCBI_GP:OFQ18661.1;Name=OFQ18661.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634611.1;locus_tag=HMPREF2948_05370;product=tRNA 2-thiocytidine biosynthesis protein TtcA;protein_id=OFQ18661.1;transl_table=11 KV814729.1 Genbank gene 50875 50960 . - . ID=gene-HMPREF2948_05375;Name=HMPREF2948_05375;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05375 KV814729.1 tRNAscan-SE tRNA 50875 50960 . - . ID=rna-HMPREF2948_05375;Parent=gene-HMPREF2948_05375;anticodon=(pos:complement(50924..50926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05375;product=tRNA-Leu KV814729.1 tRNAscan-SE exon 50875 50960 . - . ID=exon-HMPREF2948_05375-1;Parent=rna-HMPREF2948_05375;anticodon=(pos:complement(50924..50926));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05375;product=tRNA-Leu KV814729.1 Genbank gene 51155 51655 . - . ID=gene-HMPREF2948_05380;Name=HMPREF2948_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05380 KV814729.1 Protein Homology CDS 51155 51655 . - 0 ID=cds-OFQ18662.1;Parent=gene-HMPREF2948_05380;Dbxref=NCBI_GP:OFQ18662.1;Name=OFQ18662.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698992.1;locus_tag=HMPREF2948_05380;product=ferritin;protein_id=OFQ18662.1;transl_table=11 KV814729.1 Genbank gene 51676 52161 . - . ID=gene-HMPREF2948_05385;Name=HMPREF2948_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05385 KV814729.1 Protein Homology CDS 51676 52161 . - 0 ID=cds-OFQ18663.1;Parent=gene-HMPREF2948_05385;Dbxref=NCBI_GP:OFQ18663.1;Name=OFQ18663.1;Note=cytoplasmic iron storage protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43707.2;locus_tag=HMPREF2948_05385;product=ferritin;protein_id=OFQ18663.1;transl_table=11 ##sequence-region KV814730.1 1 181806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814730.1 Genbank region 1 181806 . + . ID=KV814730.1:1..181806;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814730.1 Genbank gene 1 3292 . - . ID=gene-HMPREF2948_05390;Name=HMPREF2948_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05390;partial=true;start_range=.,1 KV814730.1 GeneMarkS+ CDS 1 3292 . - 0 ID=cds-OFQ18494.1;Parent=gene-HMPREF2948_05390;Dbxref=NCBI_GP:OFQ18494.1;Name=OFQ18494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05390;partial=true;product=hypothetical protein;protein_id=OFQ18494.1;start_range=.,1;transl_table=11 KV814730.1 Genbank gene 4191 4277 . - . ID=gene-HMPREF2948_05395;Name=HMPREF2948_05395;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05395 KV814730.1 tRNAscan-SE tRNA 4191 4277 . - . ID=rna-HMPREF2948_05395;Parent=gene-HMPREF2948_05395;anticodon=(pos:complement(4241..4243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05395;product=tRNA-Leu KV814730.1 tRNAscan-SE exon 4191 4277 . - . ID=exon-HMPREF2948_05395-1;Parent=rna-HMPREF2948_05395;anticodon=(pos:complement(4241..4243));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05395;product=tRNA-Leu KV814730.1 Genbank gene 4306 4379 . - . ID=gene-HMPREF2948_05400;Name=HMPREF2948_05400;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05400 KV814730.1 tRNAscan-SE tRNA 4306 4379 . - . ID=rna-HMPREF2948_05400;Parent=gene-HMPREF2948_05400;anticodon=(pos:complement(4345..4347));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05400;product=tRNA-Cys KV814730.1 tRNAscan-SE exon 4306 4379 . - . ID=exon-HMPREF2948_05400-1;Parent=rna-HMPREF2948_05400;anticodon=(pos:complement(4345..4347));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05400;product=tRNA-Cys KV814730.1 Genbank gene 4387 4462 . - . ID=gene-HMPREF2948_05405;Name=HMPREF2948_05405;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05405 KV814730.1 tRNAscan-SE tRNA 4387 4462 . - . ID=rna-HMPREF2948_05405;Parent=gene-HMPREF2948_05405;anticodon=(pos:complement(4427..4429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05405;product=tRNA-Gly KV814730.1 tRNAscan-SE exon 4387 4462 . - . ID=exon-HMPREF2948_05405-1;Parent=rna-HMPREF2948_05405;anticodon=(pos:complement(4427..4429));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05405;product=tRNA-Gly KV814730.1 Genbank gene 4718 5827 . + . ID=gene-HMPREF2948_05410;Name=HMPREF2948_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05410 KV814730.1 Protein Homology CDS 4718 5827 . + 0 ID=cds-OFQ18495.1;Parent=gene-HMPREF2948_05410;Dbxref=NCBI_GP:OFQ18495.1;Name=OFQ18495.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44502.1;locus_tag=HMPREF2948_05410;product=cystathionine gamma-synthase;protein_id=OFQ18495.1;transl_table=11 KV814730.1 Genbank gene 5945 6268 . + . ID=gene-HMPREF2948_05415;Name=HMPREF2948_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05415 KV814730.1 Protein Homology CDS 5945 6268 . + 0 ID=cds-OFQ18496.1;Parent=gene-HMPREF2948_05415;Dbxref=NCBI_GP:OFQ18496.1;Name=OFQ18496.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43785.1;locus_tag=HMPREF2948_05415;product=thiol reductase thioredoxin;protein_id=OFQ18496.1;transl_table=11 KV814730.1 Genbank gene 6323 7132 . - . ID=gene-HMPREF2948_05420;Name=HMPREF2948_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05420 KV814730.1 Protein Homology CDS 6323 7132 . - 0 ID=cds-OFQ18497.1;Parent=gene-HMPREF2948_05420;Dbxref=NCBI_GP:OFQ18497.1;Name=OFQ18497.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526032.1;locus_tag=HMPREF2948_05420;product=ATP-dependent DNA ligase;protein_id=OFQ18497.1;transl_table=11 KV814730.1 Genbank gene 7330 7914 . + . ID=gene-HMPREF2948_05425;Name=gmhA;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=HMPREF2948_05425 KV814730.1 Protein Homology CDS 7330 7914 . + 0 ID=cds-OFQ18498.1;Parent=gene-HMPREF2948_05425;Dbxref=NCBI_GP:OFQ18498.1;Name=OFQ18498.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527809.1;locus_tag=HMPREF2948_05425;product=phosphoheptose isomerase;protein_id=OFQ18498.1;transl_table=11 KV814730.1 Genbank gene 8067 8804 . + . ID=gene-HMPREF2948_05430;Name=HMPREF2948_05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05430 KV814730.1 Protein Homology CDS 8067 8804 . + 0 ID=cds-OFQ18499.1;Parent=gene-HMPREF2948_05430;Dbxref=NCBI_GP:OFQ18499.1;Name=OFQ18499.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697706.1;locus_tag=HMPREF2948_05430;product=arginine ABC transporter ATP-binding protein;protein_id=OFQ18499.1;transl_table=11 KV814730.1 Genbank gene 8816 9535 . + . ID=gene-HMPREF2948_05435;Name=HMPREF2948_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05435 KV814730.1 Protein Homology CDS 8816 9535 . + 0 ID=cds-OFQ18500.1;Parent=gene-HMPREF2948_05435;Dbxref=NCBI_GP:OFQ18500.1;Name=OFQ18500.1;Note=with ArtPMQI is involved in arginine transport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357096.1;locus_tag=HMPREF2948_05435;product=arginine ABC transporter substrate-binding protein;protein_id=OFQ18500.1;transl_table=11 KV814730.1 Genbank gene 9539 10210 . + . ID=gene-HMPREF2948_05440;Name=HMPREF2948_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05440 KV814730.1 Protein Homology CDS 9539 10210 . + 0 ID=cds-OFQ18501.1;Parent=gene-HMPREF2948_05440;Dbxref=NCBI_GP:OFQ18501.1;Name=OFQ18501.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686494.1;locus_tag=HMPREF2948_05440;product=ABC transporter;protein_id=OFQ18501.1;transl_table=11 KV814730.1 Genbank gene 10210 10893 . + . ID=gene-HMPREF2948_05445;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=HMPREF2948_05445 KV814730.1 Protein Homology CDS 10210 10893 . + 0 ID=cds-OFQ18502.1;Parent=gene-HMPREF2948_05445;Dbxref=NCBI_GP:OFQ18502.1;Name=OFQ18502.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;inference=EXISTENCE: similar to AA sequence:SwissProt:P45089.1;locus_tag=HMPREF2948_05445;product=arginine transporter permease subunit ArtM;protein_id=OFQ18502.1;transl_table=11 KV814730.1 Genbank gene 10986 11939 . + . ID=gene-HMPREF2948_05450;Name=HMPREF2948_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05450 KV814730.1 Protein Homology CDS 10986 11939 . + 0 ID=cds-OFQ18573.1;Parent=gene-HMPREF2948_05450;Dbxref=NCBI_GP:OFQ18573.1;Name=OFQ18573.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526390.1;locus_tag=HMPREF2948_05450;product=WYL domain-containing protein;protein_id=OFQ18573.1;transl_table=11 KV814730.1 Genbank gene 11998 12885 . + . ID=gene-HMPREF2948_05455;Name=HMPREF2948_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05455 KV814730.1 Protein Homology CDS 11998 12885 . + 0 ID=cds-OFQ18503.1;Parent=gene-HMPREF2948_05455;Dbxref=NCBI_GP:OFQ18503.1;Name=OFQ18503.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633650.1;locus_tag=HMPREF2948_05455;product=hypothetical protein;protein_id=OFQ18503.1;transl_table=11 KV814730.1 Genbank gene 13061 13762 . + . ID=gene-HMPREF2948_05460;Name=HMPREF2948_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05460 KV814730.1 GeneMarkS+ CDS 13061 13762 . + 0 ID=cds-OFQ18504.1;Parent=gene-HMPREF2948_05460;Dbxref=NCBI_GP:OFQ18504.1;Name=OFQ18504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05460;product=hypothetical protein;protein_id=OFQ18504.1;transl_table=11 KV814730.1 Genbank gene 13878 14510 . + . ID=gene-HMPREF2948_05465;Name=HMPREF2948_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05465 KV814730.1 GeneMarkS+ CDS 13878 14510 . + 0 ID=cds-OFQ18505.1;Parent=gene-HMPREF2948_05465;Dbxref=NCBI_GP:OFQ18505.1;Name=OFQ18505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05465;product=hypothetical protein;protein_id=OFQ18505.1;transl_table=11 KV814730.1 Genbank gene 14657 16291 . + . ID=gene-HMPREF2948_05470;Name=HMPREF2948_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05470 KV814730.1 GeneMarkS+ CDS 14657 16291 . + 0 ID=cds-OFQ18506.1;Parent=gene-HMPREF2948_05470;Dbxref=NCBI_GP:OFQ18506.1;Name=OFQ18506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05470;product=hypothetical protein;protein_id=OFQ18506.1;transl_table=11 KV814730.1 Genbank gene 16424 17125 . + . ID=gene-HMPREF2948_05475;Name=HMPREF2948_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05475 KV814730.1 Protein Homology CDS 16424 17125 . + 0 ID=cds-OFQ18507.1;Parent=gene-HMPREF2948_05475;Dbxref=NCBI_GP:OFQ18507.1;Name=OFQ18507.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526311.1;locus_tag=HMPREF2948_05475;product=NAD-dependent deacylase;protein_id=OFQ18507.1;transl_table=11 KV814730.1 Genbank gene 17238 17735 . + . ID=gene-HMPREF2948_05480;Name=HMPREF2948_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05480 KV814730.1 Protein Homology CDS 17238 17735 . + 0 ID=cds-OFQ18508.1;Parent=gene-HMPREF2948_05480;Dbxref=NCBI_GP:OFQ18508.1;Name=OFQ18508.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005598142.1;locus_tag=HMPREF2948_05480;product=hypothetical protein;protein_id=OFQ18508.1;transl_table=11 KV814730.1 Genbank gene 17746 18462 . + . ID=gene-HMPREF2948_05485;Name=HMPREF2948_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05485 KV814730.1 Protein Homology CDS 17746 18462 . + 0 ID=cds-OFQ18509.1;Parent=gene-HMPREF2948_05485;Dbxref=NCBI_GP:OFQ18509.1;Name=OFQ18509.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637833.1;locus_tag=HMPREF2948_05485;product=hypothetical protein;protein_id=OFQ18509.1;transl_table=11 KV814730.1 Genbank gene 18517 19515 . - . ID=gene-HMPREF2948_05490;Name=HMPREF2948_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05490 KV814730.1 Protein Homology CDS 18517 19515 . - 0 ID=cds-OFQ18510.1;Parent=gene-HMPREF2948_05490;Dbxref=NCBI_GP:OFQ18510.1;Name=OFQ18510.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005689639.1;locus_tag=HMPREF2948_05490;product=hypothetical protein;protein_id=OFQ18510.1;transl_table=11 KV814730.1 Genbank gene 19734 19934 . + . ID=gene-HMPREF2948_05495;Name=HMPREF2948_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05495 KV814730.1 Protein Homology CDS 19734 19934 . + 0 ID=cds-OFQ18511.1;Parent=gene-HMPREF2948_05495;Dbxref=NCBI_GP:OFQ18511.1;Name=OFQ18511.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634667.1;locus_tag=HMPREF2948_05495;product=cell division protein FtsK;protein_id=OFQ18511.1;transl_table=11 KV814730.1 Genbank gene 19931 20776 . + . ID=gene-HMPREF2948_05500;Name=HMPREF2948_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05500 KV814730.1 Protein Homology CDS 19931 20776 . + 0 ID=cds-OFQ18512.1;Parent=gene-HMPREF2948_05500;Dbxref=NCBI_GP:OFQ18512.1;Name=OFQ18512.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637830.1;locus_tag=HMPREF2948_05500;product=NAD-dependent deacetylase;protein_id=OFQ18512.1;transl_table=11 KV814730.1 Genbank gene 20776 21549 . + . ID=gene-HMPREF2948_05505;Name=HMPREF2948_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05505 KV814730.1 Protein Homology CDS 20776 21549 . + 0 ID=cds-OFQ18513.1;Parent=gene-HMPREF2948_05505;Dbxref=NCBI_GP:OFQ18513.1;Name=OFQ18513.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650371.1;locus_tag=HMPREF2948_05505;product=protein phosphatase;protein_id=OFQ18513.1;transl_table=11 KV814730.1 Genbank gene 21618 22997 . + . ID=gene-HMPREF2948_05510;Name=HMPREF2948_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05510 KV814730.1 Protein Homology CDS 21618 22997 . + 0 ID=cds-OFQ18514.1;Parent=gene-HMPREF2948_05510;Dbxref=NCBI_GP:OFQ18514.1;Name=OFQ18514.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650372.1;locus_tag=HMPREF2948_05510;product=hypothetical protein;protein_id=OFQ18514.1;transl_table=11 KV814730.1 Genbank gene 22999 24909 . + . ID=gene-HMPREF2948_05515;Name=HMPREF2948_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05515 KV814730.1 Protein Homology CDS 22999 24909 . + 0 ID=cds-OFQ18515.1;Parent=gene-HMPREF2948_05515;Dbxref=NCBI_GP:OFQ18515.1;Name=OFQ18515.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657400.1;locus_tag=HMPREF2948_05515;product=hypothetical protein;protein_id=OFQ18515.1;transl_table=11 KV814730.1 Genbank gene 25003 27054 . + . ID=gene-HMPREF2948_05520;Name=HMPREF2948_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05520 KV814730.1 Protein Homology CDS 25003 27054 . + 0 ID=cds-OFQ18516.1;Parent=gene-HMPREF2948_05520;Dbxref=NCBI_GP:OFQ18516.1;Name=OFQ18516.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526296.1;locus_tag=HMPREF2948_05520;product=serine/threonine protein phosphatase;protein_id=OFQ18516.1;transl_table=11 KV814730.1 Genbank gene 27098 27331 . - . ID=gene-HMPREF2948_05525;Name=HMPREF2948_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05525 KV814730.1 Protein Homology CDS 27098 27331 . - 0 ID=cds-OFQ18517.1;Parent=gene-HMPREF2948_05525;Dbxref=NCBI_GP:OFQ18517.1;Name=OFQ18517.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635025.1;locus_tag=HMPREF2948_05525;product=hypothetical protein;protein_id=OFQ18517.1;transl_table=11 KV814730.1 Genbank gene 27534 29108 . + . ID=gene-HMPREF2948_05530;Name=HMPREF2948_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05530 KV814730.1 Protein Homology CDS 27534 29108 . + 0 ID=cds-OFQ18518.1;Parent=gene-HMPREF2948_05530;Dbxref=NCBI_GP:OFQ18518.1;Name=OFQ18518.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651351.1;locus_tag=HMPREF2948_05530;product=carbon starvation protein CstA;protein_id=OFQ18518.1;transl_table=11 KV814730.1 Genbank gene 29316 29774 . + . ID=gene-HMPREF2948_05535;Name=HMPREF2948_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05535 KV814730.1 Protein Homology CDS 29316 29774 . + 0 ID=cds-OFQ18519.1;Parent=gene-HMPREF2948_05535;Dbxref=NCBI_GP:OFQ18519.1;Name=OFQ18519.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696540.1;locus_tag=HMPREF2948_05535;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=OFQ18519.1;transl_table=11 KV814730.1 Genbank gene 29860 30843 . + . ID=gene-HMPREF2948_05540;Name=HMPREF2948_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05540 KV814730.1 Protein Homology CDS 29860 30843 . + 0 ID=cds-OFQ18574.1;Parent=gene-HMPREF2948_05540;Dbxref=NCBI_GP:OFQ18574.1;Name=OFQ18574.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696539.1;locus_tag=HMPREF2948_05540;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase;protein_id=OFQ18574.1;transl_table=11 KV814730.1 Genbank gene 30830 31150 . + . ID=gene-HMPREF2948_05545;Name=HMPREF2948_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05545 KV814730.1 Protein Homology CDS 30830 31150 . + 0 ID=cds-OFQ18520.1;Parent=gene-HMPREF2948_05545;Dbxref=NCBI_GP:OFQ18520.1;Name=OFQ18520.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647600.1;locus_tag=HMPREF2948_05545;product=cell division protein FtsL;protein_id=OFQ18520.1;transl_table=11 KV814730.1 Genbank gene 31165 32985 . + . ID=gene-HMPREF2948_05550;Name=HMPREF2948_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05550 KV814730.1 Protein Homology CDS 31165 32985 . + 0 ID=cds-OFQ18521.1;Parent=gene-HMPREF2948_05550;Dbxref=NCBI_GP:OFQ18521.1;Name=OFQ18521.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527834.1;locus_tag=HMPREF2948_05550;product=peptidoglycan synthase;protein_id=OFQ18521.1;transl_table=11 KV814730.1 Genbank gene 33000 34469 . + . ID=gene-HMPREF2948_05555;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=HMPREF2948_05555 KV814730.1 Protein Homology CDS 33000 34469 . + 0 ID=cds-OFQ18522.1;Parent=gene-HMPREF2948_05555;Dbxref=NCBI_GP:OFQ18522.1;Name=OFQ18522.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065027.1;locus_tag=HMPREF2948_05555;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=OFQ18522.1;transl_table=11 KV814730.1 Genbank gene 34479 35849 . + . ID=gene-HMPREF2948_05560;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=HMPREF2948_05560 KV814730.1 Protein Homology CDS 34479 35849 . + 0 ID=cds-OFQ18523.1;Parent=gene-HMPREF2948_05560;Dbxref=NCBI_GP:OFQ18523.1;Name=OFQ18523.1;gbkey=CDS;gene=murF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697744.1;locus_tag=HMPREF2948_05560;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=OFQ18523.1;transl_table=11 KV814730.1 Genbank gene 35843 36925 . + . ID=gene-HMPREF2948_05565;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=HMPREF2948_05565 KV814730.1 Protein Homology CDS 35843 36925 . + 0 ID=cds-OFQ18524.1;Parent=gene-HMPREF2948_05565;Dbxref=NCBI_GP:OFQ18524.1;Name=OFQ18524.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=HMPREF2948_05565;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=OFQ18524.1;transl_table=11 KV814730.1 Genbank gene 36988 38301 . + . ID=gene-HMPREF2948_05570;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=HMPREF2948_05570 KV814730.1 Protein Homology CDS 36988 38301 . + 0 ID=cds-OFQ18525.1;Parent=gene-HMPREF2948_05570;Dbxref=NCBI_GP:OFQ18525.1;Name=OFQ18525.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065030.1;locus_tag=HMPREF2948_05570;product=UDP-N-acetylmuramoylalanine--D-glutamate ligase;protein_id=OFQ18525.1;transl_table=11 KV814730.1 Genbank gene 38316 39500 . + . ID=gene-HMPREF2948_05575;Name=HMPREF2948_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05575 KV814730.1 Protein Homology CDS 38316 39500 . + 0 ID=cds-OFQ18526.1;Parent=gene-HMPREF2948_05575;Dbxref=NCBI_GP:OFQ18526.1;Name=OFQ18526.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697709.1;locus_tag=HMPREF2948_05575;product=cell division protein FtsW;protein_id=OFQ18526.1;transl_table=11 KV814730.1 Genbank gene 39509 40561 . + . ID=gene-HMPREF2948_05580;Name=HMPREF2948_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05580 KV814730.1 Protein Homology CDS 39509 40561 . + 0 ID=cds-OFQ18527.1;Parent=gene-HMPREF2948_05580;Dbxref=NCBI_GP:OFQ18527.1;Name=OFQ18527.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065032.1;locus_tag=HMPREF2948_05580;product=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;protein_id=OFQ18527.1;transl_table=11 KV814730.1 Genbank gene 40634 42061 . + . ID=gene-HMPREF2948_05585;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=HMPREF2948_05585 KV814730.1 Protein Homology CDS 40634 42061 . + 0 ID=cds-OFQ18528.1;Parent=gene-HMPREF2948_05585;Dbxref=NCBI_GP:OFQ18528.1;Name=OFQ18528.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018650902.1;locus_tag=HMPREF2948_05585;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=OFQ18528.1;transl_table=11 KV814730.1 Genbank gene 42120 43040 . + . ID=gene-HMPREF2948_05590;Name=HMPREF2948_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05590 KV814730.1 Protein Homology CDS 42120 43040 . + 0 ID=cds-OFQ18529.1;Parent=gene-HMPREF2948_05590;Dbxref=NCBI_GP:OFQ18529.1;Name=OFQ18529.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697694.1;locus_tag=HMPREF2948_05590;product=D-alanine--D-alanine ligase;protein_id=OFQ18529.1;transl_table=11 KV814730.1 Genbank gene 43040 43825 . + . ID=gene-HMPREF2948_05595;Name=HMPREF2948_05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05595 KV814730.1 Protein Homology CDS 43040 43825 . + 0 ID=cds-OFQ18530.1;Parent=gene-HMPREF2948_05595;Dbxref=NCBI_GP:OFQ18530.1;Name=OFQ18530.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693455.1;locus_tag=HMPREF2948_05595;product=cell division protein FtsQ;protein_id=OFQ18530.1;transl_table=11 KV814730.1 Genbank gene 43853 45127 . + . ID=gene-HMPREF2948_05600;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=HMPREF2948_05600 KV814730.1 Protein Homology CDS 43853 45127 . + 0 ID=cds-OFQ18531.1;Parent=gene-HMPREF2948_05600;Dbxref=NCBI_GP:OFQ18531.1;Name=OFQ18531.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651835.1;locus_tag=HMPREF2948_05600;product=cell division protein FtsA;protein_id=OFQ18531.1;transl_table=11 KV814730.1 Genbank gene 45214 46521 . + . ID=gene-HMPREF2948_05605;Name=HMPREF2948_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05605 KV814730.1 Protein Homology CDS 45214 46521 . + 0 ID=cds-OFQ18532.1;Parent=gene-HMPREF2948_05605;Dbxref=NCBI_GP:OFQ18532.1;Name=OFQ18532.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696524.1;locus_tag=HMPREF2948_05605;product=cell division protein FtsZ;protein_id=OFQ18532.1;transl_table=11 KV814730.1 Genbank gene 46563 47480 . + . ID=gene-HMPREF2948_05610;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=HMPREF2948_05610 KV814730.1 Protein Homology CDS 46563 47480 . + 0 ID=cds-OFQ18533.1;Parent=gene-HMPREF2948_05610;Dbxref=NCBI_GP:OFQ18533.1;Name=OFQ18533.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693459.1;locus_tag=HMPREF2948_05610;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=OFQ18533.1;transl_table=11 KV814730.1 Genbank pseudogene 47602 49237 . + . ID=gene-HMPREF2948_05615;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=pseudogene;locus_tag=HMPREF2948_05615;pseudo=true KV814730.1 Protein Homology CDS 47602 49237 . + 0 ID=cds-HMPREF2948_05615;Parent=gene-HMPREF2948_05615;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides%3B frameshifted;gbkey=CDS;gene=ushA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005764960.1;locus_tag=HMPREF2948_05615;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;pseudo=true;transl_table=11 KV814730.1 Genbank gene 49246 50403 . + . ID=gene-HMPREF2948_05620;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=HMPREF2948_05620 KV814730.1 Protein Homology CDS 49246 50403 . + 0 ID=cds-OFQ18534.1;Parent=gene-HMPREF2948_05620;Dbxref=NCBI_GP:OFQ18534.1;Name=OFQ18534.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065040.1;locus_tag=HMPREF2948_05620;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=OFQ18534.1;transl_table=11 KV814730.1 Genbank gene 50467 50793 . - . ID=gene-HMPREF2948_05625;Name=HMPREF2948_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05625 KV814730.1 Protein Homology CDS 50467 50793 . - 0 ID=cds-OFQ18535.1;Parent=gene-HMPREF2948_05625;Dbxref=NCBI_GP:OFQ18535.1;Name=OFQ18535.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012340719.1;locus_tag=HMPREF2948_05625;product=hypothetical protein;protein_id=OFQ18535.1;transl_table=11 KV814730.1 Genbank gene 50905 51465 . + . ID=gene-HMPREF2948_05630;Name=HMPREF2948_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05630 KV814730.1 Protein Homology CDS 50905 51465 . + 0 ID=cds-OFQ18536.1;Parent=gene-HMPREF2948_05630;Dbxref=NCBI_GP:OFQ18536.1;Name=OFQ18536.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696519.1;locus_tag=HMPREF2948_05630;product=hypothetical protein;protein_id=OFQ18536.1;transl_table=11 KV814730.1 Genbank gene 51499 51666 . - . ID=gene-HMPREF2948_05635;Name=HMPREF2948_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05635 KV814730.1 Protein Homology CDS 51499 51666 . - 0 ID=cds-OFQ18537.1;Parent=gene-HMPREF2948_05635;Dbxref=NCBI_GP:OFQ18537.1;Name=OFQ18537.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523105.1;locus_tag=HMPREF2948_05635;product=dsDNA-mimic protein;protein_id=OFQ18537.1;transl_table=11 KV814730.1 Genbank gene 51678 52226 . - . ID=gene-HMPREF2948_05640;Name=HMPREF2948_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05640 KV814730.1 Protein Homology CDS 51678 52226 . - 0 ID=cds-OFQ18538.1;Parent=gene-HMPREF2948_05640;Dbxref=NCBI_GP:OFQ18538.1;Name=OFQ18538.1;Note=Bacteria have multiple sigma factors which are active under specific conditions%3B the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005818070.1;locus_tag=HMPREF2948_05640;product=RNA polymerase subunit sigma;protein_id=OFQ18538.1;transl_table=11 KV814730.1 Genbank gene 52340 52660 . + . ID=gene-HMPREF2948_05645;Name=HMPREF2948_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05645 KV814730.1 Protein Homology CDS 52340 52660 . + 0 ID=cds-OFQ18539.1;Parent=gene-HMPREF2948_05645;Dbxref=NCBI_GP:OFQ18539.1;Name=OFQ18539.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243190.1;locus_tag=HMPREF2948_05645;product=hypothetical protein;protein_id=OFQ18539.1;transl_table=11 KV814730.1 Genbank gene 52723 54102 . - . ID=gene-HMPREF2948_05650;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=HMPREF2948_05650 KV814730.1 Protein Homology CDS 52723 54102 . - 0 ID=cds-OFQ18540.1;Parent=gene-HMPREF2948_05650;Dbxref=NCBI_GP:OFQ18540.1;Name=OFQ18540.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693844.1;locus_tag=HMPREF2948_05650;product=cysteine--tRNA ligase;protein_id=OFQ18540.1;transl_table=11 KV814730.1 Genbank gene 54213 54722 . + . ID=gene-HMPREF2948_05655;Name=HMPREF2948_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05655 KV814730.1 Protein Homology CDS 54213 54722 . + 0 ID=cds-OFQ18541.1;Parent=gene-HMPREF2948_05655;Dbxref=NCBI_GP:OFQ18541.1;Name=OFQ18541.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627927.1;locus_tag=HMPREF2948_05655;product=peptidylprolyl isomerase;protein_id=OFQ18541.1;transl_table=11 KV814730.1 Genbank gene 54780 55568 . + . ID=gene-HMPREF2948_05660;Name=HMPREF2948_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05660 KV814730.1 Protein Homology CDS 54780 55568 . + 0 ID=cds-OFQ18542.1;Parent=gene-HMPREF2948_05660;Dbxref=NCBI_GP:OFQ18542.1;Name=OFQ18542.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697749.1;locus_tag=HMPREF2948_05660;product=deoxyribonuclease;protein_id=OFQ18542.1;transl_table=11 KV814730.1 Genbank gene 55565 56032 . - . ID=gene-HMPREF2948_05665;Name=HMPREF2948_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05665 KV814730.1 Protein Homology CDS 55565 56032 . - 0 ID=cds-OFQ18543.1;Parent=gene-HMPREF2948_05665;Dbxref=NCBI_GP:OFQ18543.1;Name=OFQ18543.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272410.1;locus_tag=HMPREF2948_05665;product=anaerobic ribonucleotide reductase-activating protein;protein_id=OFQ18543.1;transl_table=11 KV814730.1 Genbank gene 56160 56258 . + . ID=gene-HMPREF2948_05670;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=HMPREF2948_05670 KV814730.1 cmsearch SRP_RNA 56160 56258 . + . ID=rna-HMPREF2948_05670;Parent=gene-HMPREF2948_05670;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_05670;product=signal recognition particle sRNA small type KV814730.1 cmsearch exon 56160 56258 . + . ID=exon-HMPREF2948_05670-1;Parent=rna-HMPREF2948_05670;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.1;locus_tag=HMPREF2948_05670;product=signal recognition particle sRNA small type KV814730.1 Genbank gene 56285 58015 . - . ID=gene-HMPREF2948_05675;Name=HMPREF2948_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05675 KV814730.1 Protein Homology CDS 56285 58015 . - 0 ID=cds-OFQ18544.1;Parent=gene-HMPREF2948_05675;Dbxref=NCBI_GP:OFQ18544.1;Name=OFQ18544.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019518242.1;locus_tag=HMPREF2948_05675;product=amino acid ABC transporter ATP-binding protein;protein_id=OFQ18544.1;transl_table=11 KV814730.1 Genbank gene 58015 59775 . - . ID=gene-HMPREF2948_05680;Name=HMPREF2948_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05680 KV814730.1 Protein Homology CDS 58015 59775 . - 0 ID=cds-OFQ18545.1;Parent=gene-HMPREF2948_05680;Dbxref=NCBI_GP:OFQ18545.1;Name=OFQ18545.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693472.1;locus_tag=HMPREF2948_05680;product=thiol reductant ABC exporter subunit CydD;protein_id=OFQ18545.1;transl_table=11 KV814730.1 Genbank gene 59893 60846 . - . ID=gene-HMPREF2948_05685;Name=HMPREF2948_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05685 KV814730.1 Protein Homology CDS 59893 60846 . - 0 ID=cds-OFQ18546.1;Parent=gene-HMPREF2948_05685;Dbxref=NCBI_GP:OFQ18546.1;Name=OFQ18546.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697719.1;locus_tag=HMPREF2948_05685;product=thioredoxin-disulfide reductase;protein_id=OFQ18546.1;transl_table=11 KV814730.1 Genbank gene 60936 61793 . - . ID=gene-HMPREF2948_05690;Name=HMPREF2948_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05690 KV814730.1 Protein Homology CDS 60936 61793 . - 0 ID=cds-OFQ18547.1;Parent=gene-HMPREF2948_05690;Dbxref=NCBI_GP:OFQ18547.1;Name=OFQ18547.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702090.1;locus_tag=HMPREF2948_05690;product=co-chaperone YbbN;protein_id=OFQ18547.1;transl_table=11 KV814730.1 Genbank gene 61913 63223 . - . ID=gene-HMPREF2948_05695;Name=HMPREF2948_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05695 KV814730.1 Protein Homology CDS 61913 63223 . - 0 ID=cds-OFQ18548.1;Parent=gene-HMPREF2948_05695;Dbxref=NCBI_GP:OFQ18548.1;Name=OFQ18548.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697735.1;locus_tag=HMPREF2948_05695;product=purine permease;protein_id=OFQ18548.1;transl_table=11 KV814730.1 Genbank gene 63360 64757 . - . ID=gene-HMPREF2948_05700;Name=HMPREF2948_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05700 KV814730.1 Protein Homology CDS 63360 64757 . - 0 ID=cds-OFQ18549.1;Parent=gene-HMPREF2948_05700;Dbxref=NCBI_GP:OFQ18549.1;Name=OFQ18549.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065053.1;locus_tag=HMPREF2948_05700;product=transporter;protein_id=OFQ18549.1;transl_table=11 KV814730.1 Genbank gene 64907 65488 . - . ID=gene-HMPREF2948_05705;Name=HMPREF2948_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05705 KV814730.1 Protein Homology CDS 64907 65488 . - 0 ID=cds-OFQ18550.1;Parent=gene-HMPREF2948_05705;Dbxref=NCBI_GP:OFQ18550.1;Name=OFQ18550.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019518377.1;locus_tag=HMPREF2948_05705;product=uracil-DNA glycosylase;protein_id=OFQ18550.1;transl_table=11 KV814730.1 Genbank gene 65563 67689 . - . ID=gene-HMPREF2948_05710;Name=HMPREF2948_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05710 KV814730.1 Protein Homology CDS 65563 67689 . - 0 ID=cds-OFQ18551.1;Parent=gene-HMPREF2948_05710;Dbxref=NCBI_GP:OFQ18551.1;Name=OFQ18551.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005543907.1;locus_tag=HMPREF2948_05710;product=anaerobic ribonucleoside triphosphate reductase;protein_id=OFQ18551.1;transl_table=11 KV814730.1 Genbank gene 67955 68542 . - . ID=gene-HMPREF2948_05715;Name=HMPREF2948_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05715 KV814730.1 Protein Homology CDS 67955 68542 . - 0 ID=cds-OFQ18552.1;Parent=gene-HMPREF2948_05715;Dbxref=NCBI_GP:OFQ18552.1;Name=OFQ18552.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696490.1;locus_tag=HMPREF2948_05715;product=nucleotide exchange factor GrpE;protein_id=OFQ18552.1;transl_table=11 KV814730.1 Genbank gene 68661 69551 . + . ID=gene-HMPREF2948_05720;Name=ppnK;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=HMPREF2948_05720 KV814730.1 Protein Homology CDS 68661 69551 . + 0 ID=cds-OFQ18553.1;Parent=gene-HMPREF2948_05720;Dbxref=NCBI_GP:OFQ18553.1;Name=OFQ18553.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QPH3.2;locus_tag=HMPREF2948_05720;product=NAD(+) kinase;protein_id=OFQ18553.1;transl_table=11 KV814730.1 Genbank gene 69628 71304 . + . ID=gene-HMPREF2948_05725;Name=HMPREF2948_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05725 KV814730.1 Protein Homology CDS 69628 71304 . + 0 ID=cds-OFQ18554.1;Parent=gene-HMPREF2948_05725;Dbxref=NCBI_GP:OFQ18554.1;Name=OFQ18554.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065058.1;locus_tag=HMPREF2948_05725;product=DNA repair protein RecN;protein_id=OFQ18554.1;transl_table=11 KV814730.1 Genbank gene 71328 71894 . - . ID=gene-HMPREF2948_05730;Name=HMPREF2948_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05730 KV814730.1 Protein Homology CDS 71328 71894 . - 0 ID=cds-OFQ18555.1;Parent=gene-HMPREF2948_05730;Dbxref=NCBI_GP:OFQ18555.1;Name=OFQ18555.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643630.1;locus_tag=HMPREF2948_05730;product=hypothetical protein;protein_id=OFQ18555.1;transl_table=11 KV814730.1 Genbank gene 71894 72868 . - . ID=gene-HMPREF2948_05735;Name=HMPREF2948_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05735 KV814730.1 Protein Homology CDS 71894 72868 . - 0 ID=cds-OFQ18556.1;Parent=gene-HMPREF2948_05735;Dbxref=NCBI_GP:OFQ18556.1;Name=OFQ18556.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699850.1;locus_tag=HMPREF2948_05735;product=aminobenzoate synthetase;protein_id=OFQ18556.1;transl_table=11 KV814730.1 Genbank gene 72945 73535 . + . ID=gene-HMPREF2948_05740;Name=HMPREF2948_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05740 KV814730.1 Protein Homology CDS 72945 73535 . + 0 ID=cds-OFQ18557.1;Parent=gene-HMPREF2948_05740;Dbxref=NCBI_GP:OFQ18557.1;Name=OFQ18557.1;Note=catalyzes the formation of anthranilate from chorismate and glutamine%3B functions in tryptophan biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697717.1;locus_tag=HMPREF2948_05740;product=glutamine amidotransferase;protein_id=OFQ18557.1;transl_table=11 KV814730.1 Genbank gene 73614 74768 . + . ID=gene-HMPREF2948_05745;Name=HMPREF2948_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05745 KV814730.1 Protein Homology CDS 73614 74768 . + 0 ID=cds-OFQ18558.1;Parent=gene-HMPREF2948_05745;Dbxref=NCBI_GP:OFQ18558.1;Name=OFQ18558.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869144.1;locus_tag=HMPREF2948_05745;product=methionine adenosyltransferase;protein_id=OFQ18558.1;transl_table=11 KV814730.1 Genbank gene 74824 75336 . + . ID=gene-HMPREF2948_05750;Name=HMPREF2948_05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05750 KV814730.1 Protein Homology CDS 74824 75336 . + 0 ID=cds-OFQ18559.1;Parent=gene-HMPREF2948_05750;Dbxref=NCBI_GP:OFQ18559.1;Name=OFQ18559.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696481.1;locus_tag=HMPREF2948_05750;product=SprT family protein;protein_id=OFQ18559.1;transl_table=11 KV814730.1 Genbank gene 75390 75908 . + . ID=gene-HMPREF2948_05755;Name=HMPREF2948_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05755 KV814730.1 Protein Homology CDS 75390 75908 . + 0 ID=cds-OFQ18560.1;Parent=gene-HMPREF2948_05755;Dbxref=NCBI_GP:OFQ18560.1;Name=OFQ18560.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702101.1;locus_tag=HMPREF2948_05755;product=protein opa;protein_id=OFQ18560.1;transl_table=11 KV814730.1 Genbank gene 76062 76406 . + . ID=gene-HMPREF2948_05760;Name=HMPREF2948_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05760 KV814730.1 Protein Homology CDS 76062 76406 . + 0 ID=cds-OFQ18561.1;Parent=gene-HMPREF2948_05760;Dbxref=NCBI_GP:OFQ18561.1;Name=OFQ18561.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704232.1;locus_tag=HMPREF2948_05760;product=arsenate reductase;protein_id=OFQ18561.1;transl_table=11 KV814730.1 Genbank pseudogene 76655 78609 . + . ID=gene-HMPREF2948_05765;Name=HMPREF2948_05765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_05765;pseudo=true KV814730.1 Protein Homology CDS 76655 78609 . + 0 ID=cds-HMPREF2948_05765;Parent=gene-HMPREF2948_05765;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697733.1;locus_tag=HMPREF2948_05765;product=TonB-dependent copper receptor;pseudo=true;transl_table=11 KV814730.1 Genbank gene 78728 79861 . + . ID=gene-HMPREF2948_05770;Name=HMPREF2948_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05770 KV814730.1 Protein Homology CDS 78728 79861 . + 0 ID=cds-OFQ18562.1;Parent=gene-HMPREF2948_05770;Dbxref=NCBI_GP:OFQ18562.1;Name=OFQ18562.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065067.1;locus_tag=HMPREF2948_05770;product=succinyl-diaminopimelate desuccinylase;protein_id=OFQ18562.1;transl_table=11 KV814730.1 Genbank gene 79863 80543 . + . ID=gene-HMPREF2948_05775;Name=HMPREF2948_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05775 KV814730.1 Protein Homology CDS 79863 80543 . + 0 ID=cds-OFQ18563.1;Parent=gene-HMPREF2948_05775;Dbxref=NCBI_GP:OFQ18563.1;Name=OFQ18563.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634947.1;locus_tag=HMPREF2948_05775;product=peptidase M15;protein_id=OFQ18563.1;transl_table=11 KV814730.1 Genbank gene 80584 81441 . - . ID=gene-HMPREF2948_05780;Name=HMPREF2948_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05780 KV814730.1 Protein Homology CDS 80584 81441 . - 0 ID=cds-OFQ18564.1;Parent=gene-HMPREF2948_05780;Dbxref=NCBI_GP:OFQ18564.1;Name=OFQ18564.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065069.1;locus_tag=HMPREF2948_05780;product=RNase adaptor protein RapZ;protein_id=OFQ18564.1;transl_table=11 KV814730.1 Genbank gene 81473 81991 . - . ID=gene-HMPREF2948_05785;Name=HMPREF2948_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05785 KV814730.1 Protein Homology CDS 81473 81991 . - 0 ID=cds-OFQ18565.1;Parent=gene-HMPREF2948_05785;Dbxref=NCBI_GP:OFQ18565.1;Name=OFQ18565.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696471.1;locus_tag=HMPREF2948_05785;product=phosphotransferase;protein_id=OFQ18565.1;transl_table=11 KV814730.1 Genbank gene 81995 82720 . - . ID=gene-HMPREF2948_05790;Name=HMPREF2948_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05790 KV814730.1 Protein Homology CDS 81995 82720 . - 0 ID=cds-OFQ18566.1;Parent=gene-HMPREF2948_05790;Dbxref=NCBI_GP:OFQ18566.1;Name=OFQ18566.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005727816.1;locus_tag=HMPREF2948_05790;product=ABC transporter ATP-binding protein;protein_id=OFQ18566.1;transl_table=11 KV814730.1 Genbank gene 82724 83242 . - . ID=gene-HMPREF2948_05795;Name=HMPREF2948_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05795 KV814730.1 Protein Homology CDS 82724 83242 . - 0 ID=cds-OFQ18567.1;Parent=gene-HMPREF2948_05795;Dbxref=NCBI_GP:OFQ18567.1;Name=OFQ18567.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012340727.1;locus_tag=HMPREF2948_05795;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=OFQ18567.1;transl_table=11 KV814730.1 Genbank gene 83223 83831 . - . ID=gene-HMPREF2948_05800;Name=HMPREF2948_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05800 KV814730.1 Protein Homology CDS 83223 83831 . - 0 ID=cds-OFQ18568.1;Parent=gene-HMPREF2948_05800;Dbxref=NCBI_GP:OFQ18568.1;Name=OFQ18568.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869139.1;locus_tag=HMPREF2948_05800;product=LPS export ABC transporter periplasmic protein LptC;protein_id=OFQ18568.1;transl_table=11 KV814730.1 Genbank gene 83913 84449 . - . ID=gene-HMPREF2948_05805;Name=HMPREF2948_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05805 KV814730.1 Protein Homology CDS 83913 84449 . - 0 ID=cds-OFQ18569.1;Parent=gene-HMPREF2948_05805;Dbxref=NCBI_GP:OFQ18569.1;Name=OFQ18569.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0UW94.1;locus_tag=HMPREF2948_05805;product=hypothetical protein;protein_id=OFQ18569.1;transl_table=11 KV814730.1 Genbank gene 84538 85893 . + . ID=gene-HMPREF2948_05810;Name=HMPREF2948_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05810 KV814730.1 Protein Homology CDS 84538 85893 . + 0 ID=cds-OFQ18570.1;Parent=gene-HMPREF2948_05810;Dbxref=NCBI_GP:OFQ18570.1;Name=OFQ18570.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005670716.1;locus_tag=HMPREF2948_05810;product=metalloprotease PmbA;protein_id=OFQ18570.1;transl_table=11 KV814730.1 Genbank gene 86095 86634 . + . ID=gene-HMPREF2948_05815;Name=HMPREF2948_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05815 KV814730.1 Protein Homology CDS 86095 86634 . + 0 ID=cds-OFQ18571.1;Parent=gene-HMPREF2948_05815;Dbxref=NCBI_GP:OFQ18571.1;Name=OFQ18571.1;Note=catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005765432.1;locus_tag=HMPREF2948_05815;product=hypoxanthine phosphoribosyltransferase;protein_id=OFQ18571.1;transl_table=11 KV814730.1 Genbank gene 86702 88222 . - . ID=gene-HMPREF2948_05820;Name=HMPREF2948_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05820 KV814730.1 Protein Homology CDS 86702 88222 . - 0 ID=cds-OFQ18572.1;Parent=gene-HMPREF2948_05820;Dbxref=NCBI_GP:OFQ18572.1;Name=OFQ18572.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005753389.1;locus_tag=HMPREF2948_05820;product=ribosome biogenesis GTPase Der;protein_id=OFQ18572.1;transl_table=11 KV814730.1 Genbank gene 88527 88603 . - . ID=gene-HMPREF2948_05825;Name=HMPREF2948_05825;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05825 KV814730.1 tRNAscan-SE tRNA 88527 88603 . - . ID=rna-HMPREF2948_05825;Parent=gene-HMPREF2948_05825;anticodon=(pos:complement(88567..88569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05825;product=tRNA-Asp KV814730.1 tRNAscan-SE exon 88527 88603 . - . ID=exon-HMPREF2948_05825-1;Parent=rna-HMPREF2948_05825;anticodon=(pos:complement(88567..88569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05825;product=tRNA-Asp KV814730.1 Genbank gene 88691 89452 . - . ID=gene-HMPREF2948_05830;Name=HMPREF2948_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05830 KV814730.1 Protein Homology CDS 88691 89452 . - 0 ID=cds-OFQ18425.1;Parent=gene-HMPREF2948_05830;Dbxref=NCBI_GP:OFQ18425.1;Name=OFQ18425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696462.1;locus_tag=HMPREF2948_05830;product=DNA polymerase III subunit epsilon;protein_id=OFQ18425.1;transl_table=11 KV814730.1 Genbank gene 89512 89973 . + . ID=gene-HMPREF2948_05835;Name=HMPREF2948_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05835 KV814730.1 Protein Homology CDS 89512 89973 . + 0 ID=cds-OFQ18426.1;Parent=gene-HMPREF2948_05835;Dbxref=NCBI_GP:OFQ18426.1;Name=OFQ18426.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699219.1;locus_tag=HMPREF2948_05835;product=ribonuclease HI;protein_id=OFQ18426.1;transl_table=11 KV814730.1 Genbank gene 89998 90858 . - . ID=gene-HMPREF2948_05840;Name=HMPREF2948_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05840 KV814730.1 Protein Homology CDS 89998 90858 . - 0 ID=cds-OFQ18427.1;Parent=gene-HMPREF2948_05840;Dbxref=NCBI_GP:OFQ18427.1;Name=OFQ18427.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627920.1;locus_tag=HMPREF2948_05840;product=acyl-CoA thioesterase II;protein_id=OFQ18427.1;transl_table=11 KV814730.1 Genbank gene 90916 92007 . - . ID=gene-HMPREF2948_05845;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=HMPREF2948_05845 KV814730.1 Protein Homology CDS 90916 92007 . - 0 ID=cds-OFQ18428.1;Parent=gene-HMPREF2948_05845;Dbxref=NCBI_GP:OFQ18428.1;Name=OFQ18428.1;Note=EngD%3B translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=HMPREF2948_05845;product=GTP-binding protein YchF;protein_id=OFQ18428.1;transl_table=11 KV814730.1 Genbank gene 92075 92659 . - . ID=gene-HMPREF2948_05850;Name=HMPREF2948_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05850 KV814730.1 Protein Homology CDS 92075 92659 . - 0 ID=cds-OFQ18429.1;Parent=gene-HMPREF2948_05850;Dbxref=NCBI_GP:OFQ18429.1;Name=OFQ18429.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693775.1;locus_tag=HMPREF2948_05850;product=aminoacyl-tRNA hydrolase;protein_id=OFQ18429.1;transl_table=11 KV814730.1 Genbank gene 92720 93136 . - . ID=gene-HMPREF2948_05855;Name=HMPREF2948_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05855 KV814730.1 Protein Homology CDS 92720 93136 . - 0 ID=cds-OFQ18430.1;Parent=gene-HMPREF2948_05855;Dbxref=NCBI_GP:OFQ18430.1;Name=OFQ18430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018372152.1;locus_tag=HMPREF2948_05855;product=hypothetical protein;protein_id=OFQ18430.1;transl_table=11 KV814730.1 Genbank gene 93217 93543 . + . ID=gene-HMPREF2948_05860;Name=HMPREF2948_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05860 KV814730.1 Protein Homology CDS 93217 93543 . + 0 ID=cds-OFQ18431.1;Parent=gene-HMPREF2948_05860;Dbxref=NCBI_GP:OFQ18431.1;Name=OFQ18431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698293.1;locus_tag=HMPREF2948_05860;product=RnfH family protein;protein_id=OFQ18431.1;transl_table=11 KV814730.1 Genbank gene 93548 94759 . + . ID=gene-HMPREF2948_05865;Name=HMPREF2948_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05865 KV814730.1 Protein Homology CDS 93548 94759 . + 0 ID=cds-OFQ18432.1;Parent=gene-HMPREF2948_05865;Dbxref=NCBI_GP:OFQ18432.1;Name=OFQ18432.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766685.1;locus_tag=HMPREF2948_05865;product=ribosomal oxygenase;protein_id=OFQ18432.1;transl_table=11 KV814730.1 Genbank gene 94759 96078 . + . ID=gene-HMPREF2948_05870;Name=HMPREF2948_05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05870 KV814730.1 Protein Homology CDS 94759 96078 . + 0 ID=cds-OFQ18433.1;Parent=gene-HMPREF2948_05870;Dbxref=NCBI_GP:OFQ18433.1;Name=OFQ18433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065083.1;locus_tag=HMPREF2948_05870;product=exodeoxyribonuclease VII large subunit;protein_id=OFQ18433.1;transl_table=11 KV814730.1 Genbank gene 96239 96877 . + . ID=gene-HMPREF2948_05875;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=HMPREF2948_05875 KV814730.1 Protein Homology CDS 96239 96877 . + 0 ID=cds-OFQ18434.1;Parent=gene-HMPREF2948_05875;Dbxref=NCBI_GP:OFQ18434.1;Name=OFQ18434.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688767.1;locus_tag=HMPREF2948_05875;product=ADP-ribose pyrophosphatase;protein_id=OFQ18434.1;transl_table=11 KV814730.1 Genbank gene 96870 97694 . + . ID=gene-HMPREF2948_05880;Name=HMPREF2948_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05880 KV814730.1 Protein Homology CDS 96870 97694 . + 0 ID=cds-OFQ18435.1;Parent=gene-HMPREF2948_05880;Dbxref=NCBI_GP:OFQ18435.1;Name=OFQ18435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704224.1;locus_tag=HMPREF2948_05880;product=phosphodiesterase;protein_id=OFQ18435.1;transl_table=11 KV814730.1 Genbank gene 97845 99269 . + . ID=gene-HMPREF2948_05885;Name=HMPREF2948_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05885 KV814730.1 Protein Homology CDS 97845 99269 . + 0 ID=cds-OFQ18436.1;Parent=gene-HMPREF2948_05885;Dbxref=NCBI_GP:OFQ18436.1;Name=OFQ18436.1;Note=catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550626.1;locus_tag=HMPREF2948_05885;product=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB;protein_id=OFQ18436.1;transl_table=11 KV814730.1 Genbank gene 99405 99480 . - . ID=gene-HMPREF2948_05890;Name=HMPREF2948_05890;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05890 KV814730.1 tRNAscan-SE tRNA 99405 99480 . - . ID=rna-HMPREF2948_05890;Parent=gene-HMPREF2948_05890;anticodon=(pos:complement(99445..99447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05890;product=tRNA-Lys KV814730.1 tRNAscan-SE exon 99405 99480 . - . ID=exon-HMPREF2948_05890-1;Parent=rna-HMPREF2948_05890;anticodon=(pos:complement(99445..99447));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05890;product=tRNA-Lys KV814730.1 Genbank gene 99822 100379 . - . ID=gene-HMPREF2948_05895;Name=HMPREF2948_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05895 KV814730.1 Protein Homology CDS 99822 100379 . - 0 ID=cds-OFQ18329.1;Parent=gene-HMPREF2948_05895;Dbxref=NCBI_GP:OFQ18329.1;Name=OFQ18329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005751628.1;locus_tag=HMPREF2948_05895;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=OFQ18329.1;transl_table=11 KV814730.1 Genbank gene 100470 101072 . - . ID=gene-HMPREF2948_05900;Name=HMPREF2948_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05900 KV814730.1 Protein Homology CDS 100470 101072 . - 0 ID=cds-OFQ18330.1;Parent=gene-HMPREF2948_05900;Dbxref=NCBI_GP:OFQ18330.1;Name=OFQ18330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005975989.1;locus_tag=HMPREF2948_05900;product=peroxiredoxin;protein_id=OFQ18330.1;transl_table=11 KV814730.1 Genbank gene 101213 102403 . + . ID=gene-HMPREF2948_05905;Name=HMPREF2948_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05905 KV814730.1 Protein Homology CDS 101213 102403 . + 0 ID=cds-OFQ18331.1;Parent=gene-HMPREF2948_05905;Dbxref=NCBI_GP:OFQ18331.1;Name=OFQ18331.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005577609.1;locus_tag=HMPREF2948_05905;product=cystathionine beta-lyase;protein_id=OFQ18331.1;transl_table=11 KV814730.1 Genbank gene 102495 103850 . + . ID=gene-HMPREF2948_05910;Name=HMPREF2948_05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05910 KV814730.1 Protein Homology CDS 102495 103850 . + 0 ID=cds-OFQ18332.1;Parent=gene-HMPREF2948_05910;Dbxref=NCBI_GP:OFQ18332.1;Name=OFQ18332.1;Note=ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649622.1;locus_tag=HMPREF2948_05910;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=OFQ18332.1;transl_table=11 KV814730.1 Genbank gene 103924 104430 . + . ID=gene-HMPREF2948_05915;Name=HMPREF2948_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05915 KV814730.1 Protein Homology CDS 103924 104430 . + 0 ID=cds-OFQ18333.1;Parent=gene-HMPREF2948_05915;Dbxref=NCBI_GP:OFQ18333.1;Name=OFQ18333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653606.1;locus_tag=HMPREF2948_05915;product=hypothetical protein;protein_id=OFQ18333.1;transl_table=11 KV814730.1 Genbank gene 104544 104620 . - . ID=gene-HMPREF2948_05920;Name=HMPREF2948_05920;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_05920 KV814730.1 tRNAscan-SE tRNA 104544 104620 . - . ID=rna-HMPREF2948_05920;Parent=gene-HMPREF2948_05920;anticodon=(pos:complement(104584..104586));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05920;product=tRNA-Met KV814730.1 tRNAscan-SE exon 104544 104620 . - . ID=exon-HMPREF2948_05920-1;Parent=rna-HMPREF2948_05920;anticodon=(pos:complement(104584..104586));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_05920;product=tRNA-Met KV814730.1 Genbank gene 104812 105939 . + . ID=gene-HMPREF2948_05925;Name=HMPREF2948_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05925 KV814730.1 Protein Homology CDS 104812 105939 . + 0 ID=cds-OFQ18334.1;Parent=gene-HMPREF2948_05925;Dbxref=NCBI_GP:OFQ18334.1;Name=OFQ18334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643843.1;locus_tag=HMPREF2948_05925;product=murein transglycosylase A;protein_id=OFQ18334.1;transl_table=11 KV814730.1 Genbank gene 105939 106700 . + . ID=gene-HMPREF2948_05930;Name=HMPREF2948_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05930 KV814730.1 Protein Homology CDS 105939 106700 . + 0 ID=cds-OFQ18335.1;Parent=gene-HMPREF2948_05930;Dbxref=NCBI_GP:OFQ18335.1;Name=OFQ18335.1;Note=accepts sulfur from CsdA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991108.1;locus_tag=HMPREF2948_05930;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=OFQ18335.1;transl_table=11 KV814730.1 Genbank gene 106868 107860 . + . ID=gene-HMPREF2948_05935;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=HMPREF2948_05935 KV814730.1 Protein Homology CDS 106868 107860 . + 0 ID=cds-OFQ18336.1;Parent=gene-HMPREF2948_05935;Dbxref=NCBI_GP:OFQ18336.1;Name=OFQ18336.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527541.1;locus_tag=HMPREF2948_05935;product=zinc ABC transporter substrate-binding protein;protein_id=OFQ18336.1;transl_table=11 KV814730.1 Genbank gene 107862 108173 . - . ID=gene-HMPREF2948_05940;Name=HMPREF2948_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05940 KV814730.1 GeneMarkS+ CDS 107862 108173 . - 0 ID=cds-OFQ18337.1;Parent=gene-HMPREF2948_05940;Dbxref=NCBI_GP:OFQ18337.1;Name=OFQ18337.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05940;product=hypothetical protein;protein_id=OFQ18337.1;transl_table=11 KV814730.1 Genbank gene 108152 110287 . + . ID=gene-HMPREF2948_05945;Name=rlmL;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=HMPREF2948_05945 KV814730.1 Protein Homology CDS 108152 110287 . + 0 ID=cds-OFQ18338.1;Parent=gene-HMPREF2948_05945;Dbxref=NCBI_GP:OFQ18338.1;Name=OFQ18338.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005701396.1;locus_tag=HMPREF2948_05945;product=23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))-methyltransferase;protein_id=OFQ18338.1;transl_table=11 KV814730.1 Genbank gene 110324 112228 . - . ID=gene-HMPREF2948_05950;Name=HMPREF2948_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05950 KV814730.1 Protein Homology CDS 110324 112228 . - 0 ID=cds-OFQ18339.1;Parent=gene-HMPREF2948_05950;Dbxref=NCBI_GP:OFQ18339.1;Name=OFQ18339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065097.1;locus_tag=HMPREF2948_05950;product=potassium transporter;protein_id=OFQ18339.1;transl_table=11 KV814730.1 Genbank gene 112477 112929 . + . ID=gene-HMPREF2948_05955;Name=HMPREF2948_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05955 KV814730.1 Protein Homology CDS 112477 112929 . + 0 ID=cds-OFQ18340.1;Parent=gene-HMPREF2948_05955;Dbxref=NCBI_GP:OFQ18340.1;Name=OFQ18340.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005559046.1;locus_tag=HMPREF2948_05955;product=hypothetical protein;protein_id=OFQ18340.1;transl_table=11 KV814730.1 Genbank gene 112930 113319 . + . ID=gene-HMPREF2948_05960;Name=HMPREF2948_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05960 KV814730.1 Protein Homology CDS 112930 113319 . + 0 ID=cds-OFQ18341.1;Parent=gene-HMPREF2948_05960;Dbxref=NCBI_GP:OFQ18341.1;Name=OFQ18341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626360.1;locus_tag=HMPREF2948_05960;product=hypothetical protein;protein_id=OFQ18341.1;transl_table=11 KV814730.1 Genbank gene 113316 117230 . + . ID=gene-HMPREF2948_05965;Name=HMPREF2948_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05965 KV814730.1 Protein Homology CDS 113316 117230 . + 0 ID=cds-OFQ18342.1;Parent=gene-HMPREF2948_05965;Dbxref=NCBI_GP:OFQ18342.1;Name=OFQ18342.1;Note=involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500162.1;locus_tag=HMPREF2948_05965;product=ATP-dependent helicase;protein_id=OFQ18342.1;transl_table=11 KV814730.1 Genbank gene 117238 118023 . + . ID=gene-HMPREF2948_05970;Name=HMPREF2948_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05970 KV814730.1 GeneMarkS+ CDS 117238 118023 . + 0 ID=cds-OFQ18343.1;Parent=gene-HMPREF2948_05970;Dbxref=NCBI_GP:OFQ18343.1;Name=OFQ18343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05970;product=hypothetical protein;protein_id=OFQ18343.1;transl_table=11 KV814730.1 Genbank gene 118093 118707 . + . ID=gene-HMPREF2948_05975;Name=HMPREF2948_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05975 KV814730.1 GeneMarkS+ CDS 118093 118707 . + 0 ID=cds-OFQ18344.1;Parent=gene-HMPREF2948_05975;Dbxref=NCBI_GP:OFQ18344.1;Name=OFQ18344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_05975;product=hypothetical protein;protein_id=OFQ18344.1;transl_table=11 KV814730.1 Genbank gene 118962 119465 . - . ID=gene-HMPREF2948_05980;Name=HMPREF2948_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05980 KV814730.1 Protein Homology CDS 118962 119465 . - 0 ID=cds-OFQ18345.1;Parent=gene-HMPREF2948_05980;Dbxref=NCBI_GP:OFQ18345.1;Name=OFQ18345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065105.1;locus_tag=HMPREF2948_05980;product=7%2C8-dihydro-6-hydroxymethylpterin-pyrophosphokinase;protein_id=OFQ18345.1;transl_table=11 KV814730.1 Genbank gene 119465 120949 . - . ID=gene-HMPREF2948_05985;Name=HMPREF2948_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05985 KV814730.1 Protein Homology CDS 119465 120949 . - 0 ID=cds-OFQ18346.1;Parent=gene-HMPREF2948_05985;Dbxref=NCBI_GP:OFQ18346.1;Name=OFQ18346.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643458.1;locus_tag=HMPREF2948_05985;product=poly(A) polymerase;protein_id=OFQ18346.1;transl_table=11 KV814730.1 Genbank gene 121059 121496 . - . ID=gene-HMPREF2948_05990;Name=HMPREF2948_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05990 KV814730.1 Protein Homology CDS 121059 121496 . - 0 ID=cds-OFQ18347.1;Parent=gene-HMPREF2948_05990;Dbxref=NCBI_GP:OFQ18347.1;Name=OFQ18347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010906892.1;locus_tag=HMPREF2948_05990;product=RNA polymerase-binding protein DksA;protein_id=OFQ18347.1;transl_table=11 KV814730.1 Genbank gene 121759 124161 . + . ID=gene-HMPREF2948_05995;Name=HMPREF2948_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_05995 KV814730.1 Protein Homology CDS 121759 124161 . + 0 ID=cds-OFQ18348.1;Parent=gene-HMPREF2948_05995;Dbxref=NCBI_GP:OFQ18348.1;Name=OFQ18348.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44408.1;locus_tag=HMPREF2948_05995;product=recombinase;protein_id=OFQ18348.1;transl_table=11 KV814730.1 Genbank gene 124199 125962 . + . ID=gene-HMPREF2948_06000;Name=HMPREF2948_06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06000 KV814730.1 Protein Homology CDS 124199 125962 . + 0 ID=cds-OFQ18349.1;Parent=gene-HMPREF2948_06000;Dbxref=NCBI_GP:OFQ18349.1;Name=OFQ18349.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691014.1;locus_tag=HMPREF2948_06000;product=lipid ABC transporter permease/ATP-binding protein;protein_id=OFQ18349.1;transl_table=11 KV814730.1 Genbank gene 126016 126996 . + . ID=gene-HMPREF2948_06005;Name=HMPREF2948_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06005 KV814730.1 Protein Homology CDS 126016 126996 . + 0 ID=cds-OFQ18350.1;Parent=gene-HMPREF2948_06005;Dbxref=NCBI_GP:OFQ18350.1;Name=OFQ18350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UB80.1;locus_tag=HMPREF2948_06005;product=tetraacyldisaccharide 4'-kinase;protein_id=OFQ18350.1;transl_table=11 KV814730.1 Genbank gene 127014 127193 . + . ID=gene-HMPREF2948_06010;Name=HMPREF2948_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06010 KV814730.1 Protein Homology CDS 127014 127193 . + 0 ID=cds-OFQ18351.1;Parent=gene-HMPREF2948_06010;Dbxref=NCBI_GP:OFQ18351.1;Name=OFQ18351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696424.1;locus_tag=HMPREF2948_06010;product=hypothetical protein;protein_id=OFQ18351.1;transl_table=11 KV814730.1 Genbank gene 127203 127961 . + . ID=gene-HMPREF2948_06015;Name=HMPREF2948_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06015 KV814730.1 Protein Homology CDS 127203 127961 . + 0 ID=cds-OFQ18352.1;Parent=gene-HMPREF2948_06015;Dbxref=NCBI_GP:OFQ18352.1;Name=OFQ18352.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766777.1;locus_tag=HMPREF2948_06015;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=OFQ18352.1;transl_table=11 KV814730.1 Genbank gene 127971 129797 . + . ID=gene-HMPREF2948_06020;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=HMPREF2948_06020 KV814730.1 Protein Homology CDS 127971 129797 . + 0 ID=cds-OFQ18353.1;Parent=gene-HMPREF2948_06020;Dbxref=NCBI_GP:OFQ18353.1;Name=OFQ18353.1;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696421.1;locus_tag=HMPREF2948_06020;product=excinuclease ABC subunit C;protein_id=OFQ18353.1;transl_table=11 KV814730.1 Genbank gene 129866 130585 . + . ID=gene-HMPREF2948_06025;Name=HMPREF2948_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06025 KV814730.1 Protein Homology CDS 129866 130585 . + 0 ID=cds-OFQ18354.1;Parent=gene-HMPREF2948_06025;Dbxref=NCBI_GP:OFQ18354.1;Name=OFQ18354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065115.1;locus_tag=HMPREF2948_06025;product=hypothetical protein;protein_id=OFQ18354.1;transl_table=11 KV814730.1 Genbank gene 130624 131676 . - . ID=gene-HMPREF2948_06030;Name=HMPREF2948_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06030 KV814730.1 Protein Homology CDS 130624 131676 . - 0 ID=cds-OFQ18355.1;Parent=gene-HMPREF2948_06030;Dbxref=NCBI_GP:OFQ18355.1;Name=OFQ18355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525349.1;locus_tag=HMPREF2948_06030;product=peptide ABC transporter substrate-binding protein;protein_id=OFQ18355.1;transl_table=11 KV814730.1 Genbank gene 131690 133210 . - . ID=gene-HMPREF2948_06035;Name=HMPREF2948_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06035 KV814730.1 Protein Homology CDS 131690 133210 . - 0 ID=cds-OFQ18356.1;Parent=gene-HMPREF2948_06035;Dbxref=NCBI_GP:OFQ18356.1;Name=OFQ18356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759099.1;locus_tag=HMPREF2948_06035;product=Fe3+ dicitrate ABC transporter permease;protein_id=OFQ18356.1;transl_table=11 KV814730.1 Genbank gene 133295 134293 . - . ID=gene-HMPREF2948_06040;Name=HMPREF2948_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06040 KV814730.1 Protein Homology CDS 133295 134293 . - 0 ID=cds-OFQ18357.1;Parent=gene-HMPREF2948_06040;Dbxref=NCBI_GP:OFQ18357.1;Name=OFQ18357.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005546204.1;locus_tag=HMPREF2948_06040;product=iron ABC transporter substrate-binding protein;protein_id=OFQ18357.1;transl_table=11 KV814730.1 Genbank gene 134459 136006 . - . ID=gene-HMPREF2948_06045;Name=HMPREF2948_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06045 KV814730.1 Protein Homology CDS 134459 136006 . - 0 ID=cds-OFQ18358.1;Parent=gene-HMPREF2948_06045;Dbxref=NCBI_GP:OFQ18358.1;Name=OFQ18358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637776.1;locus_tag=HMPREF2948_06045;product=methyltransferase;protein_id=OFQ18358.1;transl_table=11 KV814730.1 Genbank gene 136252 138525 . + . ID=gene-HMPREF2948_06050;Name=HMPREF2948_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06050 KV814730.1 Protein Homology CDS 136252 138525 . + 0 ID=cds-OFQ18359.1;Parent=gene-HMPREF2948_06050;Dbxref=NCBI_GP:OFQ18359.1;Name=OFQ18359.1;Note=Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065118.1;locus_tag=HMPREF2948_06050;product=bifunctional glutamate--cysteine ligase/glutathione synthetase;protein_id=OFQ18359.1;transl_table=11 KV814730.1 Genbank gene 138624 139712 . + . ID=gene-HMPREF2948_06055;Name=HMPREF2948_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06055 KV814730.1 Protein Homology CDS 138624 139712 . + 0 ID=cds-OFQ18360.1;Parent=gene-HMPREF2948_06055;Dbxref=NCBI_GP:OFQ18360.1;Name=OFQ18360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625772.1;locus_tag=HMPREF2948_06055;product=nucleoside triphosphate hydrolase;protein_id=OFQ18360.1;transl_table=11 KV814730.1 Genbank gene 139714 140178 . + . ID=gene-HMPREF2948_06060;Name=HMPREF2948_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06060 KV814730.1 Protein Homology CDS 139714 140178 . + 0 ID=cds-OFQ18361.1;Parent=gene-HMPREF2948_06060;Dbxref=NCBI_GP:OFQ18361.1;Name=OFQ18361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634940.1;locus_tag=HMPREF2948_06060;product=rRNA maturation RNase YbeY;protein_id=OFQ18361.1;transl_table=11 KV814730.1 Genbank gene 140197 140982 . + . ID=gene-HMPREF2948_06065;Name=HMPREF2948_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06065 KV814730.1 Protein Homology CDS 140197 140982 . + 0 ID=cds-OFQ18362.1;Parent=gene-HMPREF2948_06065;Dbxref=NCBI_GP:OFQ18362.1;Name=OFQ18362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527209.1;locus_tag=HMPREF2948_06065;product=hypothetical protein;protein_id=OFQ18362.1;transl_table=11 KV814730.1 Genbank gene 141019 141516 . - . ID=gene-HMPREF2948_06070;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=HMPREF2948_06070 KV814730.1 Protein Homology CDS 141019 141516 . - 0 ID=cds-OFQ18363.1;Parent=gene-HMPREF2948_06070;Dbxref=NCBI_GP:OFQ18363.1;Name=OFQ18363.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625197.1;locus_tag=HMPREF2948_06070;product=2-Cys peroxiredoxin;protein_id=OFQ18363.1;transl_table=11 KV814730.1 Genbank gene 141525 142634 . - . ID=gene-HMPREF2948_06075;Name=HMPREF2948_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06075 KV814730.1 Protein Homology CDS 141525 142634 . - 0 ID=cds-OFQ18364.1;Parent=gene-HMPREF2948_06075;Dbxref=NCBI_GP:OFQ18364.1;Name=OFQ18364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696410.1;locus_tag=HMPREF2948_06075;product=histidinol-phosphate transaminase;protein_id=OFQ18364.1;transl_table=11 KV814730.1 Genbank gene 142699 143781 . - . ID=gene-HMPREF2948_06080;Name=HMPREF2948_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06080 KV814730.1 Protein Homology CDS 142699 143781 . - 0 ID=cds-OFQ18365.1;Parent=gene-HMPREF2948_06080;Dbxref=NCBI_GP:OFQ18365.1;Name=OFQ18365.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006249451.1;locus_tag=HMPREF2948_06080;product=3-phosphoserine/phosphohydroxythreonine aminotransferase;protein_id=OFQ18365.1;transl_table=11 KV814730.1 Genbank gene 143960 144310 . + . ID=gene-HMPREF2948_06085;Name=HMPREF2948_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06085 KV814730.1 Protein Homology CDS 143960 144310 . + 0 ID=cds-OFQ18366.1;Parent=gene-HMPREF2948_06085;Dbxref=NCBI_GP:OFQ18366.1;Name=OFQ18366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696407.1;locus_tag=HMPREF2948_06085;product=hypothetical protein;protein_id=OFQ18366.1;transl_table=11 KV814730.1 Genbank gene 144387 144884 . - . ID=gene-HMPREF2948_06090;Name=HMPREF2948_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06090 KV814730.1 Protein Homology CDS 144387 144884 . - 0 ID=cds-OFQ18367.1;Parent=gene-HMPREF2948_06090;Dbxref=NCBI_GP:OFQ18367.1;Name=OFQ18367.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015674483.1;locus_tag=HMPREF2948_06090;product=phosphatidylethanolamine-binding protein;protein_id=OFQ18367.1;transl_table=11 KV814730.1 Genbank gene 144895 145887 . - . ID=gene-HMPREF2948_06095;Name=HMPREF2948_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06095 KV814730.1 Protein Homology CDS 144895 145887 . - 0 ID=cds-OFQ18368.1;Parent=gene-HMPREF2948_06095;Dbxref=NCBI_GP:OFQ18368.1;Name=OFQ18368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635036.1;locus_tag=HMPREF2948_06095;product=16S rRNA methyltransferase;protein_id=OFQ18368.1;transl_table=11 KV814730.1 Genbank gene 145975 146565 . + . ID=gene-HMPREF2948_06100;Name=HMPREF2948_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06100 KV814730.1 Protein Homology CDS 145975 146565 . + 0 ID=cds-OFQ18369.1;Parent=gene-HMPREF2948_06100;Dbxref=NCBI_GP:OFQ18369.1;Name=OFQ18369.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699535.1;locus_tag=HMPREF2948_06100;product=hypothetical protein;protein_id=OFQ18369.1;transl_table=11 KV814730.1 Genbank gene 146569 146973 . + . ID=gene-HMPREF2948_06105;Name=HMPREF2948_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06105 KV814730.1 Protein Homology CDS 146569 146973 . + 0 ID=cds-OFQ18370.1;Parent=gene-HMPREF2948_06105;Dbxref=NCBI_GP:OFQ18370.1;Name=OFQ18370.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065129.1;locus_tag=HMPREF2948_06105;product=DNA polymerase III subunit psi;protein_id=OFQ18370.1;transl_table=11 KV814730.1 Genbank gene 146976 147416 . + . ID=gene-HMPREF2948_06110;Name=HMPREF2948_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06110 KV814730.1 Protein Homology CDS 146976 147416 . + 0 ID=cds-OFQ18400.1;Parent=gene-HMPREF2948_06110;Dbxref=NCBI_GP:OFQ18400.1;Name=OFQ18400.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525390.1;locus_tag=HMPREF2948_06110;product=ribosomal-protein-alanine N-acetyltransferase RimI;protein_id=OFQ18400.1;transl_table=11 KV814730.1 Genbank gene 147472 148380 . - . ID=gene-HMPREF2948_06115;Name=HMPREF2948_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06115 KV814730.1 Protein Homology CDS 147472 148380 . - 0 ID=cds-OFQ18371.1;Parent=gene-HMPREF2948_06115;Dbxref=NCBI_GP:OFQ18371.1;Name=OFQ18371.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696398.1;locus_tag=HMPREF2948_06115;product=formate dehydrogenase accessory protein FdhE;protein_id=OFQ18371.1;transl_table=11 KV814730.1 Genbank gene 148441 149157 . - . ID=gene-HMPREF2948_06120;Name=HMPREF2948_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06120 KV814730.1 Protein Homology CDS 148441 149157 . - 0 ID=cds-OFQ18372.1;Parent=gene-HMPREF2948_06120;Dbxref=NCBI_GP:OFQ18372.1;Name=OFQ18372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696396.1;locus_tag=HMPREF2948_06120;product=formate dehydrogenase subunit gamma;protein_id=OFQ18372.1;transl_table=11 KV814730.1 Genbank gene 149150 150085 . - . ID=gene-HMPREF2948_06125;Name=HMPREF2948_06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06125 KV814730.1 Protein Homology CDS 149150 150085 . - 0 ID=cds-OFQ18373.1;Parent=gene-HMPREF2948_06125;Dbxref=NCBI_GP:OFQ18373.1;Name=OFQ18373.1;Note=beta subunit%3B involved in the use of formate as an electron donor during aerobic respiration%3B acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271778.1;locus_tag=HMPREF2948_06125;product=formate dehydrogenase subunit beta;protein_id=OFQ18373.1;transl_table=11 KV814730.1 Genbank gene 150087 152510 . - . ID=gene-HMPREF2948_06130;Name=HMPREF2948_06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06130 KV814730.1 Protein Homology CDS 150087 152510 . - 0 ID=cds-OFQ18374.1;Parent=gene-HMPREF2948_06130;Dbxref=NCBI_GP:OFQ18374.1;Name=OFQ18374.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018345920.1;locus_tag=HMPREF2948_06130;product=formate dehydrogenase;protein_id=OFQ18374.1;transl_table=11 KV814730.1 Genbank gene 152559 153170 . - . ID=gene-HMPREF2948_06135;Name=HMPREF2948_06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06135 KV814730.1 Protein Homology CDS 152559 153170 . - 0 ID=cds-OFQ18375.1;Parent=gene-HMPREF2948_06135;Dbxref=NCBI_GP:OFQ18375.1;Name=OFQ18375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005657859.1;locus_tag=HMPREF2948_06135;product=sulfate ABC transporter substrate-binding protein;protein_id=OFQ18375.1;transl_table=11 KV814730.1 Genbank gene 153445 154254 . + . ID=gene-HMPREF2948_06140;Name=HMPREF2948_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06140 KV814730.1 Protein Homology CDS 153445 154254 . + 0 ID=cds-OFQ18376.1;Parent=gene-HMPREF2948_06140;Dbxref=NCBI_GP:OFQ18376.1;Name=OFQ18376.1;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065134.1;locus_tag=HMPREF2948_06140;product=formate dehydrogenase accessory protein FdhD;protein_id=OFQ18376.1;transl_table=11 KV814730.1 Genbank gene 154322 155368 . - . ID=gene-HMPREF2948_06145;Name=HMPREF2948_06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06145 KV814730.1 Protein Homology CDS 154322 155368 . - 0 ID=cds-OFQ18377.1;Parent=gene-HMPREF2948_06145;Dbxref=NCBI_GP:OFQ18377.1;Name=OFQ18377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697764.1;locus_tag=HMPREF2948_06145;product=hypothetical protein;protein_id=OFQ18377.1;transl_table=11 KV814730.1 Genbank gene 155512 157689 . + . ID=gene-HMPREF2948_06150;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=HMPREF2948_06150 KV814730.1 Protein Homology CDS 155512 157689 . + 0 ID=cds-OFQ18378.1;Parent=gene-HMPREF2948_06150;Dbxref=NCBI_GP:OFQ18378.1;Name=OFQ18378.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634955.1;locus_tag=HMPREF2948_06150;product=DNA-dependent helicase II;protein_id=OFQ18378.1;transl_table=11 KV814730.1 Genbank gene 157798 158802 . + . ID=gene-HMPREF2948_06155;Name=HMPREF2948_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06155 KV814730.1 Protein Homology CDS 157798 158802 . + 0 ID=cds-OFQ18379.1;Parent=gene-HMPREF2948_06155;Dbxref=NCBI_GP:OFQ18379.1;Name=OFQ18379.1;Note=transports peptides consisting of two or three amino acids;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065138.1;locus_tag=HMPREF2948_06155;product=peptide ABC transporter permease;protein_id=OFQ18379.1;transl_table=11 KV814730.1 Genbank gene 158815 159711 . + . ID=gene-HMPREF2948_06160;Name=HMPREF2948_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06160 KV814730.1 Protein Homology CDS 158815 159711 . + 0 ID=cds-OFQ18380.1;Parent=gene-HMPREF2948_06160;Dbxref=NCBI_GP:OFQ18380.1;Name=OFQ18380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005653671.1;locus_tag=HMPREF2948_06160;product=peptide transporter;protein_id=OFQ18380.1;transl_table=11 KV814730.1 Genbank gene 159720 160703 . + . ID=gene-HMPREF2948_06165;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=HMPREF2948_06165 KV814730.1 Protein Homology CDS 159720 160703 . + 0 ID=cds-OFQ18381.1;Parent=gene-HMPREF2948_06165;Dbxref=NCBI_GP:OFQ18381.1;Name=OFQ18381.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697772.1;locus_tag=HMPREF2948_06165;product=peptide ABC transporter ATP-binding protein;protein_id=OFQ18381.1;transl_table=11 KV814730.1 Genbank gene 160696 161679 . + . ID=gene-HMPREF2948_06170;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=HMPREF2948_06170 KV814730.1 Protein Homology CDS 160696 161679 . + 0 ID=cds-OFQ18382.1;Parent=gene-HMPREF2948_06170;Dbxref=NCBI_GP:OFQ18382.1;Name=OFQ18382.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691143.1;locus_tag=HMPREF2948_06170;product=peptide ABC transporter ATP-binding protein;protein_id=OFQ18382.1;transl_table=11 KV814730.1 Genbank gene 161727 162905 . - . ID=gene-HMPREF2948_06175;Name=HMPREF2948_06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06175 KV814730.1 Protein Homology CDS 161727 162905 . - 0 ID=cds-OFQ18383.1;Parent=gene-HMPREF2948_06175;Dbxref=NCBI_GP:OFQ18383.1;Name=OFQ18383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701408.1;locus_tag=HMPREF2948_06175;product=sugar transporter;protein_id=OFQ18383.1;transl_table=11 KV814730.1 Genbank gene 162905 164092 . - . ID=gene-HMPREF2948_06180;Name=HMPREF2948_06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06180 KV814730.1 Protein Homology CDS 162905 164092 . - 0 ID=cds-OFQ18384.1;Parent=gene-HMPREF2948_06180;Dbxref=NCBI_GP:OFQ18384.1;Name=OFQ18384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699537.1;locus_tag=HMPREF2948_06180;product=hypothetical protein;protein_id=OFQ18384.1;transl_table=11 KV814730.1 Genbank gene 164096 164677 . - . ID=gene-HMPREF2948_06185;Name=HMPREF2948_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06185 KV814730.1 Protein Homology CDS 164096 164677 . - 0 ID=cds-OFQ18385.1;Parent=gene-HMPREF2948_06185;Dbxref=NCBI_GP:OFQ18385.1;Name=OFQ18385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357115.1;locus_tag=HMPREF2948_06185;product=dCTP deaminase;protein_id=OFQ18385.1;transl_table=11 KV814730.1 Genbank gene 164686 165327 . - . ID=gene-HMPREF2948_06190;Name=HMPREF2948_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06190 KV814730.1 Protein Homology CDS 164686 165327 . - 0 ID=cds-OFQ18386.1;Parent=gene-HMPREF2948_06190;Dbxref=NCBI_GP:OFQ18386.1;Name=OFQ18386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I2Y9.1;locus_tag=HMPREF2948_06190;product=uridine kinase;protein_id=OFQ18386.1;transl_table=11 KV814730.1 Genbank gene 165515 166555 . + . ID=gene-HMPREF2948_06195;Name=HMPREF2948_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06195 KV814730.1 Protein Homology CDS 165515 166555 . + 0 ID=cds-OFQ18387.1;Parent=gene-HMPREF2948_06195;Dbxref=NCBI_GP:OFQ18387.1;Name=OFQ18387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005541087.1;locus_tag=HMPREF2948_06195;product=hypothetical protein;protein_id=OFQ18387.1;transl_table=11 KV814730.1 Genbank gene 166693 167727 . + . ID=gene-HMPREF2948_06200;Name=HMPREF2948_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06200 KV814730.1 Protein Homology CDS 166693 167727 . + 0 ID=cds-OFQ18388.1;Parent=gene-HMPREF2948_06200;Dbxref=NCBI_GP:OFQ18388.1;Name=OFQ18388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012073411.1;locus_tag=HMPREF2948_06200;product=hypothetical protein;protein_id=OFQ18388.1;transl_table=11 KV814730.1 Genbank gene 167793 169850 . + . ID=gene-HMPREF2948_06205;Name=HMPREF2948_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06205 KV814730.1 Protein Homology CDS 167793 169850 . + 0 ID=cds-OFQ18389.1;Parent=gene-HMPREF2948_06205;Dbxref=NCBI_GP:OFQ18389.1;Name=OFQ18389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005605314.1;locus_tag=HMPREF2948_06205;product=iron ABC transporter permease;protein_id=OFQ18389.1;transl_table=11 KV814730.1 Genbank gene 169875 170927 . + . ID=gene-HMPREF2948_06210;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=HMPREF2948_06210 KV814730.1 Protein Homology CDS 169875 170927 . + 0 ID=cds-OFQ18390.1;Parent=gene-HMPREF2948_06210;Dbxref=NCBI_GP:OFQ18390.1;Name=OFQ18390.1;Note=Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import;gbkey=CDS;gene=fbpC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696376.1;locus_tag=HMPREF2948_06210;product=ferric transporter ATP-binding subunit;protein_id=OFQ18390.1;transl_table=11 KV814730.1 Genbank gene 171073 173028 . + . ID=gene-HMPREF2948_06215;Name=HMPREF2948_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06215 KV814730.1 Protein Homology CDS 171073 173028 . + 0 ID=cds-OFQ18391.1;Parent=gene-HMPREF2948_06215;Dbxref=NCBI_GP:OFQ18391.1;Name=OFQ18391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697770.1;locus_tag=HMPREF2948_06215;product=recombinase;protein_id=OFQ18391.1;transl_table=11 KV814730.1 Genbank gene 173143 174072 . + . ID=gene-HMPREF2948_06220;Name=HMPREF2948_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06220 KV814730.1 Protein Homology CDS 173143 174072 . + 0 ID=cds-OFQ18392.1;Parent=gene-HMPREF2948_06220;Dbxref=NCBI_GP:OFQ18392.1;Name=OFQ18392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694223.1;locus_tag=HMPREF2948_06220;product=LysR family transcriptional regulator;protein_id=OFQ18392.1;transl_table=11 KV814730.1 Genbank gene 174082 174807 . + . ID=gene-HMPREF2948_06225;Name=HMPREF2948_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06225 KV814730.1 Protein Homology CDS 174082 174807 . + 0 ID=cds-OFQ18393.1;Parent=gene-HMPREF2948_06225;Dbxref=NCBI_GP:OFQ18393.1;Name=OFQ18393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065150.1;locus_tag=HMPREF2948_06225;product=branched-chain amino acid transporter AzlC;protein_id=OFQ18393.1;transl_table=11 KV814730.1 Genbank gene 174804 175133 . + . ID=gene-HMPREF2948_06230;Name=HMPREF2948_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06230 KV814730.1 Protein Homology CDS 174804 175133 . + 0 ID=cds-OFQ18394.1;Parent=gene-HMPREF2948_06230;Dbxref=NCBI_GP:OFQ18394.1;Name=OFQ18394.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005562318.1;locus_tag=HMPREF2948_06230;product=branched-chain amino acid ABC transporter;protein_id=OFQ18394.1;transl_table=11 KV814730.1 Genbank gene 175255 175500 . + . ID=gene-HMPREF2948_06235;Name=HMPREF2948_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06235 KV814730.1 Protein Homology CDS 175255 175500 . + 0 ID=cds-OFQ18395.1;Parent=gene-HMPREF2948_06235;Dbxref=NCBI_GP:OFQ18395.1;Name=OFQ18395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697762.1;locus_tag=HMPREF2948_06235;product=hypothetical protein;protein_id=OFQ18395.1;transl_table=11 KV814730.1 Genbank pseudogene 175518 176453 . - . ID=gene-HMPREF2948_06240;Name=HMPREF2948_06240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06240;pseudo=true KV814730.1 Protein Homology CDS 175518 176453 . - 0 ID=cds-HMPREF2948_06240;Parent=gene-HMPREF2948_06240;Note=internal stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525379.1;locus_tag=HMPREF2948_06240;product=autotransporter;pseudo=true;transl_table=11 KV814730.1 Genbank gene 176540 178099 . - . ID=gene-HMPREF2948_06245;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=HMPREF2948_06245 KV814730.1 Protein Homology CDS 176540 178099 . - 0 ID=cds-OFQ18396.1;Parent=gene-HMPREF2948_06245;Dbxref=NCBI_GP:OFQ18396.1;Name=OFQ18396.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550523.1;locus_tag=HMPREF2948_06245;product=GMP synthetase;protein_id=OFQ18396.1;transl_table=11 KV814730.1 Genbank gene 178209 179672 . - . ID=gene-HMPREF2948_06250;Name=HMPREF2948_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06250 KV814730.1 Protein Homology CDS 178209 179672 . - 0 ID=cds-OFQ18397.1;Parent=gene-HMPREF2948_06250;Dbxref=NCBI_GP:OFQ18397.1;Name=OFQ18397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9L6B7.1;locus_tag=HMPREF2948_06250;product=IMP dehydrogenase;protein_id=OFQ18397.1;transl_table=11 KV814730.1 Genbank gene 179799 180719 . + . ID=gene-HMPREF2948_06255;Name=HMPREF2948_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06255 KV814730.1 Protein Homology CDS 179799 180719 . + 0 ID=cds-OFQ18398.1;Parent=gene-HMPREF2948_06255;Dbxref=NCBI_GP:OFQ18398.1;Name=OFQ18398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011961768.1;locus_tag=HMPREF2948_06255;product=bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] ligase;protein_id=OFQ18398.1;transl_table=11 KV814730.1 Genbank gene 180807 181628 . - . ID=gene-HMPREF2948_06260;Name=HMPREF2948_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06260 KV814730.1 Protein Homology CDS 180807 181628 . - 0 ID=cds-OFQ18399.1;Parent=gene-HMPREF2948_06260;Dbxref=NCBI_GP:OFQ18399.1;Name=OFQ18399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697780.1;locus_tag=HMPREF2948_06260;product=hypothetical protein;protein_id=OFQ18399.1;transl_table=11 ##sequence-region KV814731.1 1 1099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814731.1 Genbank region 1 1099 . + . ID=KV814731.1:1..1099;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814731.1 Genbank gene 1 1099 . - . ID=gene-HMPREF2948_06265;Name=HMPREF2948_06265;end_range=1099,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_06265;partial=true;start_range=.,1 KV814731.1 Genbank rRNA 1 1099 . - . ID=rna-HMPREF2948_06265;Parent=gene-HMPREF2948_06265;end_range=1099,.;gbkey=rRNA;locus_tag=HMPREF2948_06265;partial=true;product=23S ribosomal RNA;start_range=.,1 KV814731.1 Genbank exon 1 1099 . - . ID=exon-HMPREF2948_06265-1;Parent=rna-HMPREF2948_06265;end_range=1099,.;gbkey=rRNA;locus_tag=HMPREF2948_06265;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region KV814732.1 1 43573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814732.1 Genbank region 1 43573 . + . ID=KV814732.1:1..43573;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814732.1 Genbank pseudogene 1 226 . - . ID=gene-HMPREF2948_06270;Name=HMPREF2948_06270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06270;pseudo=true KV814732.1 Protein Homology CDS 1 226 . - 0 ID=cds-HMPREF2948_06270;Parent=gene-HMPREF2948_06270;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690296.1;locus_tag=HMPREF2948_06270;product=transcriptional regulator;pseudo=true;transl_table=11 KV814732.1 Genbank gene 331 975 . - . ID=gene-HMPREF2948_06275;Name=HMPREF2948_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06275 KV814732.1 Protein Homology CDS 331 975 . - 0 ID=cds-OFQ18158.1;Parent=gene-HMPREF2948_06275;Dbxref=NCBI_GP:OFQ18158.1;Name=OFQ18158.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627146.1;locus_tag=HMPREF2948_06275;product=peptidylprolyl isomerase;protein_id=OFQ18158.1;transl_table=11 KV814732.1 Genbank gene 1021 1734 . - . ID=gene-HMPREF2948_06280;Name=HMPREF2948_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06280 KV814732.1 Protein Homology CDS 1021 1734 . - 0 ID=cds-OFQ18159.1;Parent=gene-HMPREF2948_06280;Dbxref=NCBI_GP:OFQ18159.1;Name=OFQ18159.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695140.1;locus_tag=HMPREF2948_06280;product=hypothetical protein;protein_id=OFQ18159.1;transl_table=11 KV814732.1 Genbank gene 1797 2225 . - . ID=gene-HMPREF2948_06285;Name=HMPREF2948_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06285 KV814732.1 Protein Homology CDS 1797 2225 . - 0 ID=cds-OFQ18160.1;Parent=gene-HMPREF2948_06285;Dbxref=NCBI_GP:OFQ18160.1;Name=OFQ18160.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272176.1;locus_tag=HMPREF2948_06285;product=RNase E inhibitor protein;protein_id=OFQ18160.1;transl_table=11 KV814732.1 Genbank gene 2430 3452 . + . ID=gene-HMPREF2948_06290;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=HMPREF2948_06290 KV814732.1 Protein Homology CDS 2430 3452 . + 0 ID=cds-OFQ18161.1;Parent=gene-HMPREF2948_06290;Dbxref=NCBI_GP:OFQ18161.1;Name=OFQ18161.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698909.1;locus_tag=HMPREF2948_06290;product=tRNA pseudouridine synthase TruD;protein_id=OFQ18161.1;transl_table=11 KV814732.1 Genbank gene 3452 4192 . + . ID=gene-HMPREF2948_06295;Name=HMPREF2948_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06295 KV814732.1 Protein Homology CDS 3452 4192 . + 0 ID=cds-OFQ18162.1;Parent=gene-HMPREF2948_06295;Dbxref=NCBI_GP:OFQ18162.1;Name=OFQ18162.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005555792.1;locus_tag=HMPREF2948_06295;product=5'/3'-nucleotidase SurE;protein_id=OFQ18162.1;transl_table=11 KV814732.1 Genbank gene 4245 4820 . + . ID=gene-HMPREF2948_06300;Name=HMPREF2948_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06300 KV814732.1 Protein Homology CDS 4245 4820 . + 0 ID=cds-OFQ18163.1;Parent=gene-HMPREF2948_06300;Dbxref=NCBI_GP:OFQ18163.1;Name=OFQ18163.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201420.1;locus_tag=HMPREF2948_06300;product=hypothetical protein;protein_id=OFQ18163.1;transl_table=11 KV814732.1 Genbank gene 4837 5025 . + . ID=gene-HMPREF2948_06305;Name=HMPREF2948_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06305 KV814732.1 Protein Homology CDS 4837 5025 . + 0 ID=cds-OFQ18164.1;Parent=gene-HMPREF2948_06305;Dbxref=NCBI_GP:OFQ18164.1;Name=OFQ18164.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44040.1;locus_tag=HMPREF2948_06305;product=hypothetical protein;protein_id=OFQ18164.1;transl_table=11 KV814732.1 Genbank gene 5049 6284 . + . ID=gene-HMPREF2948_06310;Name=HMPREF2948_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06310 KV814732.1 Protein Homology CDS 5049 6284 . + 0 ID=cds-OFQ18165.1;Parent=gene-HMPREF2948_06310;Dbxref=NCBI_GP:OFQ18165.1;Name=OFQ18165.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698882.1;locus_tag=HMPREF2948_06310;product=hypothetical protein;protein_id=OFQ18165.1;transl_table=11 KV814732.1 Genbank gene 6378 8093 . + . ID=gene-HMPREF2948_06315;Name=HMPREF2948_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06315 KV814732.1 Protein Homology CDS 6378 8093 . + 0 ID=cds-OFQ18166.1;Parent=gene-HMPREF2948_06315;Dbxref=NCBI_GP:OFQ18166.1;Name=OFQ18166.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761176.1;locus_tag=HMPREF2948_06315;product=proline--tRNA ligase;protein_id=OFQ18166.1;transl_table=11 KV814732.1 Genbank gene 8158 8832 . - . ID=gene-HMPREF2948_06320;Name=HMPREF2948_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06320 KV814732.1 Protein Homology CDS 8158 8832 . - 0 ID=cds-OFQ18167.1;Parent=gene-HMPREF2948_06320;Dbxref=NCBI_GP:OFQ18167.1;Name=OFQ18167.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005703476.1;locus_tag=HMPREF2948_06320;product=2-deoxyribose-5-phosphate aldolase;protein_id=OFQ18167.1;transl_table=11 KV814732.1 Genbank gene 8942 9445 . + . ID=gene-HMPREF2948_06325;Name=HMPREF2948_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06325 KV814732.1 Protein Homology CDS 8942 9445 . + 0 ID=cds-OFQ18168.1;Parent=gene-HMPREF2948_06325;Dbxref=NCBI_GP:OFQ18168.1;Name=OFQ18168.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643157.1;locus_tag=HMPREF2948_06325;product=thioredoxin;protein_id=OFQ18168.1;transl_table=11 KV814732.1 Genbank gene 9498 10424 . + . ID=gene-HMPREF2948_06330;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=HMPREF2948_06330 KV814732.1 Protein Homology CDS 9498 10424 . + 0 ID=cds-OFQ18169.1;Parent=gene-HMPREF2948_06330;Dbxref=NCBI_GP:OFQ18169.1;Name=OFQ18169.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632797.1;locus_tag=HMPREF2948_06330;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=OFQ18169.1;transl_table=11 KV814732.1 Genbank gene 10478 11959 . - . ID=gene-HMPREF2948_06335;Name=HMPREF2948_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06335 KV814732.1 Protein Homology CDS 10478 11959 . - 0 ID=cds-OFQ18170.1;Parent=gene-HMPREF2948_06335;Dbxref=NCBI_GP:OFQ18170.1;Name=OFQ18170.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014668380.1;locus_tag=HMPREF2948_06335;product=xylulokinase;protein_id=OFQ18170.1;transl_table=11 KV814732.1 Genbank gene 12016 13335 . - . ID=gene-HMPREF2948_06340;Name=HMPREF2948_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06340 KV814732.1 Protein Homology CDS 12016 13335 . - 0 ID=cds-OFQ18171.1;Parent=gene-HMPREF2948_06340;Dbxref=NCBI_GP:OFQ18171.1;Name=OFQ18171.1;Note=catalyzes the interconversion of D-xylose to D-xylulose;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651773.1;locus_tag=HMPREF2948_06340;product=xylose isomerase;protein_id=OFQ18171.1;transl_table=11 KV814732.1 Genbank gene 13569 14567 . + . ID=gene-HMPREF2948_06345;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=HMPREF2948_06345 KV814732.1 Protein Homology CDS 13569 14567 . + 0 ID=cds-OFQ18172.1;Parent=gene-HMPREF2948_06345;Dbxref=NCBI_GP:OFQ18172.1;Name=OFQ18172.1;Note=periplasmic substrate-binding component of the ATP-dependent xylose transport system%3B high affinity;gbkey=CDS;gene=xylF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693436.1;locus_tag=HMPREF2948_06345;product=D-xylose transporter subunit XylF;protein_id=OFQ18172.1;transl_table=11 KV814732.1 Genbank gene 14618 16129 . + . ID=gene-HMPREF2948_06350;Name=HMPREF2948_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06350 KV814732.1 Protein Homology CDS 14618 16129 . + 0 ID=cds-OFQ18173.1;Parent=gene-HMPREF2948_06350;Dbxref=NCBI_GP:OFQ18173.1;Name=OFQ18173.1;Note=with XylFH is part of the high affinity xylose ABC transporter;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005602799.1;locus_tag=HMPREF2948_06350;product=D-xylose ABC transporter ATP-binding protein;protein_id=OFQ18173.1;transl_table=11 KV814732.1 Genbank gene 16133 17260 . + . ID=gene-HMPREF2948_06355;Name=HMPREF2948_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06355 KV814732.1 Protein Homology CDS 16133 17260 . + 0 ID=cds-OFQ18174.1;Parent=gene-HMPREF2948_06355;Dbxref=NCBI_GP:OFQ18174.1;Name=OFQ18174.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686404.1;locus_tag=HMPREF2948_06355;product=sugar ABC transporter permease;protein_id=OFQ18174.1;transl_table=11 KV814732.1 Genbank gene 17535 18707 . + . ID=gene-HMPREF2948_06360;Name=HMPREF2948_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06360 KV814732.1 Protein Homology CDS 17535 18707 . + 0 ID=cds-OFQ18175.1;Parent=gene-HMPREF2948_06360;Dbxref=NCBI_GP:OFQ18175.1;Name=OFQ18175.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647647.1;locus_tag=HMPREF2948_06360;product=aminotransferase;protein_id=OFQ18175.1;transl_table=11 KV814732.1 Genbank gene 18709 20115 . + . ID=gene-HMPREF2948_06365;Name=HMPREF2948_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06365 KV814732.1 Protein Homology CDS 18709 20115 . + 0 ID=cds-OFQ18176.1;Parent=gene-HMPREF2948_06365;Dbxref=NCBI_GP:OFQ18176.1;Name=OFQ18176.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054497.1;locus_tag=HMPREF2948_06365;product=Na+/H+ antiporter NhaC;protein_id=OFQ18176.1;transl_table=11 KV814732.1 Genbank gene 20226 21389 . + . ID=gene-HMPREF2948_06370;Name=HMPREF2948_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06370 KV814732.1 Protein Homology CDS 20226 21389 . + 0 ID=cds-OFQ18177.1;Parent=gene-HMPREF2948_06370;Dbxref=NCBI_GP:OFQ18177.1;Name=OFQ18177.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693430.1;locus_tag=HMPREF2948_06370;product=XylR family transcriptional regulator;protein_id=OFQ18177.1;transl_table=11 KV814732.1 Genbank gene 21465 22508 . + . ID=gene-HMPREF2948_06375;Name=HMPREF2948_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06375 KV814732.1 Protein Homology CDS 21465 22508 . + 0 ID=cds-OFQ18178.1;Parent=gene-HMPREF2948_06375;Dbxref=NCBI_GP:OFQ18178.1;Name=OFQ18178.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693429.1;locus_tag=HMPREF2948_06375;product=ADP-heptose--LPS heptosyltransferase;protein_id=OFQ18178.1;transl_table=11 KV814732.1 Genbank gene 22505 23410 . + . ID=gene-HMPREF2948_06380;Name=HMPREF2948_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06380 KV814732.1 Protein Homology CDS 22505 23410 . + 0 ID=cds-OFQ18179.1;Parent=gene-HMPREF2948_06380;Dbxref=NCBI_GP:OFQ18179.1;Name=OFQ18179.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500808.1;locus_tag=HMPREF2948_06380;product=hypothetical protein;protein_id=OFQ18179.1;transl_table=11 KV814732.1 Genbank gene 23407 24360 . + . ID=gene-HMPREF2948_06385;Name=HMPREF2948_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06385 KV814732.1 Protein Homology CDS 23407 24360 . + 0 ID=cds-OFQ18180.1;Parent=gene-HMPREF2948_06385;Dbxref=NCBI_GP:OFQ18180.1;Name=OFQ18180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064299.1;locus_tag=HMPREF2948_06385;product=ADP-heptose--LPS heptosyltransferase;protein_id=OFQ18180.1;transl_table=11 KV814732.1 Genbank gene 24526 25629 . + . ID=gene-HMPREF2948_06390;Name=HMPREF2948_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06390 KV814732.1 Protein Homology CDS 24526 25629 . + 0 ID=cds-OFQ18181.1;Parent=gene-HMPREF2948_06390;Dbxref=NCBI_GP:OFQ18181.1;Name=OFQ18181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005822638.1;locus_tag=HMPREF2948_06390;product=porin;protein_id=OFQ18181.1;transl_table=11 KV814732.1 Genbank gene 25827 26693 . + . ID=gene-HMPREF2948_06395;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=HMPREF2948_06395 KV814732.1 Protein Homology CDS 25827 26693 . + 0 ID=cds-OFQ18182.1;Parent=gene-HMPREF2948_06395;Dbxref=NCBI_GP:OFQ18182.1;Name=OFQ18182.1;Note=becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers;gbkey=CDS;gene=hslO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698910.1;locus_tag=HMPREF2948_06395;product=molecular chaperone Hsp33;protein_id=OFQ18182.1;transl_table=11 KV814732.1 Genbank gene 26737 27561 . - . ID=gene-HMPREF2948_06400;Name=HMPREF2948_06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06400 KV814732.1 Protein Homology CDS 26737 27561 . - 0 ID=cds-OFQ18194.1;Parent=gene-HMPREF2948_06400;Dbxref=NCBI_GP:OFQ18194.1;Name=OFQ18194.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064291.1;locus_tag=HMPREF2948_06400;product=esterase;protein_id=OFQ18194.1;transl_table=11 KV814732.1 Genbank gene 27818 29434 . + . ID=gene-HMPREF2948_06405;Name=HMPREF2948_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06405 KV814732.1 Protein Homology CDS 27818 29434 . + 0 ID=cds-OFQ18183.1;Parent=gene-HMPREF2948_06405;Dbxref=NCBI_GP:OFQ18183.1;Name=OFQ18183.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064290.1;locus_tag=HMPREF2948_06405;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=OFQ18183.1;transl_table=11 KV814732.1 Genbank gene 29615 30382 . - . ID=gene-HMPREF2948_06410;Name=HMPREF2948_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06410 KV814732.1 Protein Homology CDS 29615 30382 . - 0 ID=cds-OFQ18184.1;Parent=gene-HMPREF2948_06410;Dbxref=NCBI_GP:OFQ18184.1;Name=OFQ18184.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005709065.1;locus_tag=HMPREF2948_06410;product=iron ABC transporter;protein_id=OFQ18184.1;transl_table=11 KV814732.1 Genbank gene 30382 31365 . - . ID=gene-HMPREF2948_06415;Name=fecD;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=HMPREF2948_06415 KV814732.1 Protein Homology CDS 30382 31365 . - 0 ID=cds-OFQ18185.1;Parent=gene-HMPREF2948_06415;Dbxref=NCBI_GP:OFQ18185.1;Name=OFQ18185.1;Note=Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter)%2C as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter.;gbkey=CDS;gene=fecD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526185.1;locus_tag=HMPREF2948_06415;product=iron-dicitrate transporter subunit FecD;protein_id=OFQ18185.1;transl_table=11 KV814732.1 Genbank gene 31365 32354 . - . ID=gene-HMPREF2948_06420;Name=fecC;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=HMPREF2948_06420 KV814732.1 Protein Homology CDS 31365 32354 . - 0 ID=cds-OFQ18186.1;Parent=gene-HMPREF2948_06420;Dbxref=NCBI_GP:OFQ18186.1;Name=OFQ18186.1;Note=part of the FecBCDE citrate-dependent iron (III) transport system;gbkey=CDS;gene=fecC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064286.1;locus_tag=HMPREF2948_06420;product=iron-dicitrate transporter permease subunit;protein_id=OFQ18186.1;transl_table=11 KV814732.1 Genbank gene 32354 33244 . - . ID=gene-HMPREF2948_06425;Name=fecB;gbkey=Gene;gene=fecB;gene_biotype=protein_coding;locus_tag=HMPREF2948_06425 KV814732.1 Protein Homology CDS 32354 33244 . - 0 ID=cds-OFQ18187.1;Parent=gene-HMPREF2948_06425;Dbxref=NCBI_GP:OFQ18187.1;Name=OFQ18187.1;Note=part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+);gbkey=CDS;gene=fecB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010128931.1;locus_tag=HMPREF2948_06425;product=iron-dicitrate transporter substrate-binding subunit;protein_id=OFQ18187.1;transl_table=11 KV814732.1 Genbank gene 33336 34202 . - . ID=gene-HMPREF2948_06430;Name=HMPREF2948_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06430 KV814732.1 Protein Homology CDS 33336 34202 . - 0 ID=cds-OFQ18188.1;Parent=gene-HMPREF2948_06430;Dbxref=NCBI_GP:OFQ18188.1;Name=OFQ18188.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064284.1;locus_tag=HMPREF2948_06430;product=UAA transporter family protein;protein_id=OFQ18188.1;transl_table=11 KV814732.1 Genbank gene 34316 35377 . + . ID=gene-HMPREF2948_06435;Name=HMPREF2948_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06435 KV814732.1 Protein Homology CDS 34316 35377 . + 0 ID=cds-OFQ18189.1;Parent=gene-HMPREF2948_06435;Dbxref=NCBI_GP:OFQ18189.1;Name=OFQ18189.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628780.1;locus_tag=HMPREF2948_06435;product=peptide methionine sulfoxide reductase;protein_id=OFQ18189.1;transl_table=11 KV814732.1 Genbank gene 35387 35863 . + . ID=gene-HMPREF2948_06440;Name=HMPREF2948_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06440 KV814732.1 Protein Homology CDS 35387 35863 . + 0 ID=cds-OFQ18190.1;Parent=gene-HMPREF2948_06440;Dbxref=NCBI_GP:OFQ18190.1;Name=OFQ18190.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995987.1;locus_tag=HMPREF2948_06440;product=hypothetical protein;protein_id=OFQ18190.1;transl_table=11 KV814732.1 Genbank gene 35925 36299 . + . ID=gene-HMPREF2948_06445;Name=HMPREF2948_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06445 KV814732.1 Protein Homology CDS 35925 36299 . + 0 ID=cds-OFQ18191.1;Parent=gene-HMPREF2948_06445;Dbxref=NCBI_GP:OFQ18191.1;Name=OFQ18191.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014167405.1;locus_tag=HMPREF2948_06445;product=transposase;protein_id=OFQ18191.1;transl_table=11 KV814732.1 Genbank gene 36332 37102 . + . ID=gene-HMPREF2948_06450;Name=HMPREF2948_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06450 KV814732.1 Protein Homology CDS 36332 37102 . + 0 ID=cds-OFQ18195.1;Parent=gene-HMPREF2948_06450;Dbxref=NCBI_GP:OFQ18195.1;Name=OFQ18195.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005544519.1;locus_tag=HMPREF2948_06450;product=integrase;protein_id=OFQ18195.1;transl_table=11 KV814732.1 Genbank gene 37156 38754 . + . ID=gene-HMPREF2948_06455;Name=HMPREF2948_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06455 KV814732.1 Protein Homology CDS 37156 38754 . + 0 ID=cds-OFQ18192.1;Parent=gene-HMPREF2948_06455;Dbxref=NCBI_GP:OFQ18192.1;Name=OFQ18192.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010676242.1;locus_tag=HMPREF2948_06455;product=hemin-binding protein;protein_id=OFQ18192.1;transl_table=11 KV814732.1 Genbank gene 38914 43287 . + . ID=gene-HMPREF2948_06460;Name=HMPREF2948_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06460 KV814732.1 Protein Homology CDS 38914 43287 . + 0 ID=cds-OFQ18193.1;Parent=gene-HMPREF2948_06460;Dbxref=NCBI_GP:OFQ18193.1;Name=OFQ18193.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010676243.1;locus_tag=HMPREF2948_06460;product=hemolysin;protein_id=OFQ18193.1;transl_table=11 ##sequence-region KV814733.1 1 210569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814733.1 Genbank region 1 210569 . + . ID=KV814733.1:1..210569;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814733.1 Genbank gene 54 1178 . - . ID=gene-HMPREF2948_06465;Name=HMPREF2948_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06465 KV814733.1 Protein Homology CDS 54 1178 . - 0 ID=cds-OFQ18057.1;Parent=gene-HMPREF2948_06465;Dbxref=NCBI_GP:OFQ18057.1;Name=OFQ18057.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065323.1;locus_tag=HMPREF2948_06465;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=OFQ18057.1;transl_table=11 KV814733.1 Genbank gene 1265 2188 . - . ID=gene-HMPREF2948_06470;Name=HMPREF2948_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06470 KV814733.1 Protein Homology CDS 1265 2188 . - 0 ID=cds-OFQ18058.1;Parent=gene-HMPREF2948_06470;Dbxref=NCBI_GP:OFQ18058.1;Name=OFQ18058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065322.1;locus_tag=HMPREF2948_06470;product=tRNA pseudouridine(55) synthase;protein_id=OFQ18058.1;transl_table=11 KV814733.1 Genbank gene 2188 2574 . - . ID=gene-HMPREF2948_06475;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=HMPREF2948_06475 KV814733.1 Protein Homology CDS 2188 2574 . - 0 ID=cds-OFQ18059.1;Parent=gene-HMPREF2948_06475;Dbxref=NCBI_GP:OFQ18059.1;Name=OFQ18059.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QK42.1;locus_tag=HMPREF2948_06475;product=ribosome-binding factor A;protein_id=OFQ18059.1;transl_table=11 KV814733.1 Genbank gene 2623 2898 . - . ID=gene-HMPREF2948_06480;Name=HMPREF2948_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06480 KV814733.1 GeneMarkS+ CDS 2623 2898 . - 0 ID=cds-OFQ18060.1;Parent=gene-HMPREF2948_06480;Dbxref=NCBI_GP:OFQ18060.1;Name=OFQ18060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06480;product=hypothetical protein;protein_id=OFQ18060.1;transl_table=11 KV814733.1 Genbank gene 2961 5480 . - . ID=gene-HMPREF2948_06485;Name=HMPREF2948_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06485 KV814733.1 Protein Homology CDS 2961 5480 . - 0 ID=cds-OFQ18061.1;Parent=gene-HMPREF2948_06485;Dbxref=NCBI_GP:OFQ18061.1;Name=OFQ18061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525762.1;locus_tag=HMPREF2948_06485;product=translation initiation factor IF-2;protein_id=OFQ18061.1;transl_table=11 KV814733.1 Genbank gene 5492 6979 . - . ID=gene-HMPREF2948_06490;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=HMPREF2948_06490 KV814733.1 Protein Homology CDS 5492 6979 . - 0 ID=cds-OFQ18062.1;Parent=gene-HMPREF2948_06490;Dbxref=NCBI_GP:OFQ18062.1;Name=OFQ18062.1;Note=modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination;gbkey=CDS;gene=nusA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759742.1;locus_tag=HMPREF2948_06490;product=transcription termination/antitermination protein NusA;protein_id=OFQ18062.1;transl_table=11 KV814733.1 Genbank gene 6995 7450 . - . ID=gene-HMPREF2948_06495;Name=HMPREF2948_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06495 KV814733.1 Protein Homology CDS 6995 7450 . - 0 ID=cds-OFQ18063.1;Parent=gene-HMPREF2948_06495;Dbxref=NCBI_GP:OFQ18063.1;Name=OFQ18063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759672.1;locus_tag=HMPREF2948_06495;product=ribosome maturation factor;protein_id=OFQ18063.1;transl_table=11 KV814733.1 Genbank gene 7580 7656 . - . ID=gene-HMPREF2948_06500;Name=HMPREF2948_06500;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_06500 KV814733.1 tRNAscan-SE tRNA 7580 7656 . - . ID=rna-HMPREF2948_06500;Parent=gene-HMPREF2948_06500;anticodon=(pos:complement(7620..7622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_06500;product=tRNA-Met KV814733.1 tRNAscan-SE exon 7580 7656 . - . ID=exon-HMPREF2948_06500-1;Parent=rna-HMPREF2948_06500;anticodon=(pos:complement(7620..7622));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_06500;product=tRNA-Met KV814733.1 Genbank gene 7771 7899 . - . ID=gene-HMPREF2948_06505;Name=HMPREF2948_06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06505 KV814733.1 Protein Homology CDS 7771 7899 . - 0 ID=cds-OFQ18064.1;Parent=gene-HMPREF2948_06505;Dbxref=NCBI_GP:OFQ18064.1;Name=OFQ18064.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696016.1;locus_tag=HMPREF2948_06505;product=hypothetical protein;protein_id=OFQ18064.1;transl_table=11 KV814733.1 Genbank gene 7896 8618 . - . ID=gene-HMPREF2948_06510;Name=HMPREF2948_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06510 KV814733.1 Protein Homology CDS 7896 8618 . - 0 ID=cds-OFQ18065.1;Parent=gene-HMPREF2948_06510;Dbxref=NCBI_GP:OFQ18065.1;Name=OFQ18065.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699036.1;locus_tag=HMPREF2948_06510;product=hypothetical protein;protein_id=OFQ18065.1;transl_table=11 KV814733.1 Genbank gene 8706 9266 . + . ID=gene-HMPREF2948_06515;Name=HMPREF2948_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06515 KV814733.1 Protein Homology CDS 8706 9266 . + 0 ID=cds-OFQ18066.1;Parent=gene-HMPREF2948_06515;Dbxref=NCBI_GP:OFQ18066.1;Name=OFQ18066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698953.1;locus_tag=HMPREF2948_06515;product=hypothetical protein;protein_id=OFQ18066.1;transl_table=11 KV814733.1 Genbank gene 9294 10649 . - . ID=gene-HMPREF2948_06520;Name=HMPREF2948_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06520 KV814733.1 Protein Homology CDS 9294 10649 . - 0 ID=cds-OFQ18067.1;Parent=gene-HMPREF2948_06520;Dbxref=NCBI_GP:OFQ18067.1;Name=OFQ18067.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694197.1;locus_tag=HMPREF2948_06520;product=two-component sensor histidine kinase;protein_id=OFQ18067.1;transl_table=11 KV814733.1 Genbank gene 10639 11307 . - . ID=gene-HMPREF2948_06525;Name=HMPREF2948_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06525 KV814733.1 Protein Homology CDS 10639 11307 . - 0 ID=cds-OFQ18097.1;Parent=gene-HMPREF2948_06525;Dbxref=NCBI_GP:OFQ18097.1;Name=OFQ18097.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065314.1;locus_tag=HMPREF2948_06525;product=DNA-binding response regulator;protein_id=OFQ18097.1;transl_table=11 KV814733.1 Genbank gene 11383 11751 . - . ID=gene-HMPREF2948_06530;Name=HMPREF2948_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06530 KV814733.1 Protein Homology CDS 11383 11751 . - 0 ID=cds-OFQ18068.1;Parent=gene-HMPREF2948_06530;Dbxref=NCBI_GP:OFQ18068.1;Name=OFQ18068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631924.1;locus_tag=HMPREF2948_06530;product=TIGR00156 family protein;protein_id=OFQ18068.1;transl_table=11 KV814733.1 Genbank gene 11898 12584 . - . ID=gene-HMPREF2948_06535;Name=HMPREF2948_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06535 KV814733.1 Protein Homology CDS 11898 12584 . - 0 ID=cds-OFQ18069.1;Parent=gene-HMPREF2948_06535;Dbxref=NCBI_GP:OFQ18069.1;Name=OFQ18069.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699000.1;locus_tag=HMPREF2948_06535;product=hypothetical protein;protein_id=OFQ18069.1;transl_table=11 KV814733.1 Genbank gene 12691 12939 . + . ID=gene-HMPREF2948_06540;Name=HMPREF2948_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06540 KV814733.1 Protein Homology CDS 12691 12939 . + 0 ID=cds-OFQ18070.1;Parent=gene-HMPREF2948_06540;Dbxref=NCBI_GP:OFQ18070.1;Name=OFQ18070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005537767.1;locus_tag=HMPREF2948_06540;product=(2Fe-2S)-binding protein;protein_id=OFQ18070.1;transl_table=11 KV814733.1 Genbank gene 12934 13746 . - . ID=gene-HMPREF2948_06545;Name=HMPREF2948_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06545 KV814733.1 Protein Homology CDS 12934 13746 . - 0 ID=cds-OFQ18071.1;Parent=gene-HMPREF2948_06545;Dbxref=NCBI_GP:OFQ18071.1;Name=OFQ18071.1;Note=catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696006.1;locus_tag=HMPREF2948_06545;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=OFQ18071.1;transl_table=11 KV814733.1 Genbank gene 13764 14390 . - . ID=gene-HMPREF2948_06550;Name=HMPREF2948_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06550 KV814733.1 Protein Homology CDS 13764 14390 . - 0 ID=cds-OFQ18072.1;Parent=gene-HMPREF2948_06550;Dbxref=NCBI_GP:OFQ18072.1;Name=OFQ18072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699064.1;locus_tag=HMPREF2948_06550;product=hypothetical protein;protein_id=OFQ18072.1;transl_table=11 KV814733.1 Genbank gene 14384 14878 . - . ID=gene-HMPREF2948_06555;Name=HMPREF2948_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06555 KV814733.1 Protein Homology CDS 14384 14878 . - 0 ID=cds-OFQ18073.1;Parent=gene-HMPREF2948_06555;Dbxref=NCBI_GP:OFQ18073.1;Name=OFQ18073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065308.1;locus_tag=HMPREF2948_06555;product=phosphatidylglycerophosphatase;protein_id=OFQ18073.1;transl_table=11 KV814733.1 Genbank gene 14878 15858 . - . ID=gene-HMPREF2948_06560;Name=HMPREF2948_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06560 KV814733.1 Protein Homology CDS 14878 15858 . - 0 ID=cds-OFQ18074.1;Parent=gene-HMPREF2948_06560;Dbxref=NCBI_GP:OFQ18074.1;Name=OFQ18074.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065307.1;locus_tag=HMPREF2948_06560;product=thiamine-monophosphate kinase;protein_id=OFQ18074.1;transl_table=11 KV814733.1 Genbank gene 15916 16353 . - . ID=gene-HMPREF2948_06565;Name=HMPREF2948_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06565 KV814733.1 Protein Homology CDS 15916 16353 . - 0 ID=cds-OFQ18075.1;Parent=gene-HMPREF2948_06565;Dbxref=NCBI_GP:OFQ18075.1;Name=OFQ18075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0UU23.1;locus_tag=HMPREF2948_06565;product=N utilization substance protein B;protein_id=OFQ18075.1;transl_table=11 KV814733.1 Genbank gene 16359 16832 . - . ID=gene-HMPREF2948_06570;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=HMPREF2948_06570 KV814733.1 Protein Homology CDS 16359 16832 . - 0 ID=cds-OFQ18076.1;Parent=gene-HMPREF2948_06570;Dbxref=NCBI_GP:OFQ18076.1;Name=OFQ18076.1;Note=RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not;gbkey=CDS;gene=ribH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694466.1;locus_tag=HMPREF2948_06570;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=OFQ18076.1;transl_table=11 KV814733.1 Genbank gene 16938 19403 . - . ID=gene-HMPREF2948_06575;Name=HMPREF2948_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06575 KV814733.1 Protein Homology CDS 16938 19403 . - 0 ID=cds-OFQ18077.1;Parent=gene-HMPREF2948_06575;Dbxref=NCBI_GP:OFQ18077.1;Name=OFQ18077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718175.1;locus_tag=HMPREF2948_06575;product=glycogen phosphorylase;protein_id=OFQ18077.1;transl_table=11 KV814733.1 Genbank gene 19644 21074 . - . ID=gene-HMPREF2948_06580;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=HMPREF2948_06580 KV814733.1 Protein Homology CDS 19644 21074 . - 0 ID=cds-OFQ18078.1;Parent=gene-HMPREF2948_06580;Dbxref=NCBI_GP:OFQ18078.1;Name=OFQ18078.1;Note=catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose;gbkey=CDS;gene=glgA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631647.1;locus_tag=HMPREF2948_06580;product=starch synthase;protein_id=OFQ18078.1;transl_table=11 KV814733.1 Genbank gene 21183 22484 . - . ID=gene-HMPREF2948_06585;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=HMPREF2948_06585 KV814733.1 Protein Homology CDS 21183 22484 . - 0 ID=cds-OFQ18079.1;Parent=gene-HMPREF2948_06585;Dbxref=NCBI_GP:OFQ18079.1;Name=OFQ18079.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706553.1;locus_tag=HMPREF2948_06585;product=glucose-1-phosphate adenylyltransferase;protein_id=OFQ18079.1;transl_table=11 KV814733.1 Genbank gene 22507 24486 . - . ID=gene-HMPREF2948_06590;Name=HMPREF2948_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06590 KV814733.1 Protein Homology CDS 22507 24486 . - 0 ID=cds-OFQ18080.1;Parent=gene-HMPREF2948_06590;Dbxref=NCBI_GP:OFQ18080.1;Name=OFQ18080.1;Note=catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694002.1;locus_tag=HMPREF2948_06590;product=glycogen debranching enzyme;protein_id=OFQ18080.1;transl_table=11 KV814733.1 Genbank gene 24586 26778 . - . ID=gene-HMPREF2948_06595;Name=HMPREF2948_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06595 KV814733.1 Protein Homology CDS 24586 26778 . - 0 ID=cds-OFQ18081.1;Parent=gene-HMPREF2948_06595;Dbxref=NCBI_GP:OFQ18081.1;Name=OFQ18081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550731.1;locus_tag=HMPREF2948_06595;product=glycogen-branching enzyme;protein_id=OFQ18081.1;transl_table=11 KV814733.1 Genbank gene 26813 27199 . - . ID=gene-HMPREF2948_06600;Name=HMPREF2948_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06600 KV814733.1 Protein Homology CDS 26813 27199 . - 0 ID=cds-OFQ18082.1;Parent=gene-HMPREF2948_06600;Dbxref=NCBI_GP:OFQ18082.1;Name=OFQ18082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699417.1;locus_tag=HMPREF2948_06600;product=hypothetical protein;protein_id=OFQ18082.1;transl_table=11 KV814733.1 Genbank gene 27270 27722 . - . ID=gene-HMPREF2948_06605;Name=HMPREF2948_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06605 KV814733.1 Protein Homology CDS 27270 27722 . - 0 ID=cds-OFQ18083.1;Parent=gene-HMPREF2948_06605;Dbxref=NCBI_GP:OFQ18083.1;Name=OFQ18083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UEJ1.1;locus_tag=HMPREF2948_06605;product=hypothetical protein;protein_id=OFQ18083.1;transl_table=11 KV814733.1 Genbank gene 27789 29462 . - . ID=gene-HMPREF2948_06610;Name=HMPREF2948_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06610 KV814733.1 Protein Homology CDS 27789 29462 . - 0 ID=cds-OFQ18084.1;Parent=gene-HMPREF2948_06610;Dbxref=NCBI_GP:OFQ18084.1;Name=OFQ18084.1;Note=catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005659532.1;locus_tag=HMPREF2948_06610;product=glutamine--tRNA ligase;protein_id=OFQ18084.1;transl_table=11 KV814733.1 Genbank gene 29686 30867 . + . ID=gene-HMPREF2948_06615;Name=HMPREF2948_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06615 KV814733.1 Protein Homology CDS 29686 30867 . + 0 ID=cds-OFQ18085.1;Parent=gene-HMPREF2948_06615;Dbxref=NCBI_GP:OFQ18085.1;Name=OFQ18085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005545424.1;locus_tag=HMPREF2948_06615;product=efflux transporter periplasmic adaptor subunit;protein_id=OFQ18085.1;transl_table=11 KV814733.1 Genbank gene 30886 32817 . + . ID=gene-HMPREF2948_06620;Name=HMPREF2948_06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06620 KV814733.1 Protein Homology CDS 30886 32817 . + 0 ID=cds-OFQ18086.1;Parent=gene-HMPREF2948_06620;Dbxref=NCBI_GP:OFQ18086.1;Name=OFQ18086.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65TH4.1;locus_tag=HMPREF2948_06620;product=MacB family efflux pump subunit;protein_id=OFQ18086.1;transl_table=11 KV814733.1 Genbank gene 32901 34268 . + . ID=gene-HMPREF2948_06625;Name=HMPREF2948_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06625 KV814733.1 Protein Homology CDS 32901 34268 . + 0 ID=cds-OFQ18087.1;Parent=gene-HMPREF2948_06625;Dbxref=NCBI_GP:OFQ18087.1;Name=OFQ18087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500295.1;locus_tag=HMPREF2948_06625;product=hypothetical protein;protein_id=OFQ18087.1;transl_table=11 KV814733.1 Genbank gene 34322 34951 . + . ID=gene-HMPREF2948_06630;Name=HMPREF2948_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06630 KV814733.1 Protein Homology CDS 34322 34951 . + 0 ID=cds-OFQ18088.1;Parent=gene-HMPREF2948_06630;Dbxref=NCBI_GP:OFQ18088.1;Name=OFQ18088.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641870.1;locus_tag=HMPREF2948_06630;product=phosphoglycerate mutase;protein_id=OFQ18088.1;transl_table=11 KV814733.1 Genbank gene 35024 36136 . - . ID=gene-HMPREF2948_06635;Name=HMPREF2948_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06635 KV814733.1 Protein Homology CDS 35024 36136 . - 0 ID=cds-OFQ18089.1;Parent=gene-HMPREF2948_06635;Dbxref=NCBI_GP:OFQ18089.1;Name=OFQ18089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869171.1;locus_tag=HMPREF2948_06635;product=sodium:proton antiporter;protein_id=OFQ18089.1;transl_table=11 KV814733.1 Genbank gene 36298 38346 . + . ID=gene-HMPREF2948_06640;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=HMPREF2948_06640 KV814733.1 Protein Homology CDS 36298 38346 . + 0 ID=cds-OFQ18090.1;Parent=gene-HMPREF2948_06640;Dbxref=NCBI_GP:OFQ18090.1;Name=OFQ18090.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651735.1;locus_tag=HMPREF2948_06640;product=methionine--tRNA ligase;protein_id=OFQ18090.1;transl_table=11 KV814733.1 Genbank gene 38450 39310 . + . ID=gene-HMPREF2948_06645;Name=HMPREF2948_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06645 KV814733.1 Protein Homology CDS 38450 39310 . + 0 ID=cds-OFQ18091.1;Parent=gene-HMPREF2948_06645;Dbxref=NCBI_GP:OFQ18091.1;Name=OFQ18091.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:E1X791.1;locus_tag=HMPREF2948_06645;product=tellurite resistance methyltransferase TehB;protein_id=OFQ18091.1;transl_table=11 KV814733.1 Genbank gene 39382 40209 . - . ID=gene-HMPREF2948_06650;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=HMPREF2948_06650 KV814733.1 Protein Homology CDS 39382 40209 . - 0 ID=cds-OFQ18092.1;Parent=gene-HMPREF2948_06650;Dbxref=NCBI_GP:OFQ18092.1;Name=OFQ18092.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702447.1;locus_tag=HMPREF2948_06650;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=OFQ18092.1;transl_table=11 KV814733.1 Genbank gene 40356 40820 . - . ID=gene-HMPREF2948_06655;Name=HMPREF2948_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06655 KV814733.1 Protein Homology CDS 40356 40820 . - 0 ID=cds-OFQ18093.1;Parent=gene-HMPREF2948_06655;Dbxref=NCBI_GP:OFQ18093.1;Name=OFQ18093.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065290.1;locus_tag=HMPREF2948_06655;product=hypothetical protein;protein_id=OFQ18093.1;transl_table=11 KV814733.1 Genbank gene 40844 41143 . - . ID=gene-HMPREF2948_06660;Name=HMPREF2948_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06660 KV814733.1 Protein Homology CDS 40844 41143 . - 0 ID=cds-OFQ18094.1;Parent=gene-HMPREF2948_06660;Dbxref=NCBI_GP:OFQ18094.1;Name=OFQ18094.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CN84.1;locus_tag=HMPREF2948_06660;product=hypothetical protein;protein_id=OFQ18094.1;transl_table=11 KV814733.1 Genbank gene 41148 41717 . - . ID=gene-HMPREF2948_06665;Name=HMPREF2948_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06665 KV814733.1 Protein Homology CDS 41148 41717 . - 0 ID=cds-OFQ18095.1;Parent=gene-HMPREF2948_06665;Dbxref=NCBI_GP:OFQ18095.1;Name=OFQ18095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647225.1;locus_tag=HMPREF2948_06665;product=metalloprotein;protein_id=OFQ18095.1;transl_table=11 KV814733.1 Genbank gene 41806 43539 . + . ID=gene-HMPREF2948_06670;Name=HMPREF2948_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06670 KV814733.1 Protein Homology CDS 41806 43539 . + 0 ID=cds-OFQ18096.1;Parent=gene-HMPREF2948_06670;Dbxref=NCBI_GP:OFQ18096.1;Name=OFQ18096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65SX3.1;locus_tag=HMPREF2948_06670;product=arginine--tRNA ligase;protein_id=OFQ18096.1;transl_table=11 KV814733.1 Genbank pseudogene 43689 44170 . + . ID=gene-HMPREF2948_06675;Name=HMPREF2948_06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06675;pseudo=true KV814733.1 GeneMarkS+ CDS 43689 44170 . + 2 ID=cds-HMPREF2948_06675;Parent=gene-HMPREF2948_06675;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06675;product=branched-chain amino acid transporter;pseudo=true;transl_table=11 KV814733.1 Genbank pseudogene 44367 48880 . - . ID=gene-HMPREF2948_06680;Name=HMPREF2948_06680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06680;pseudo=true KV814733.1 Protein Homology CDS 44367 48880 . - 0 ID=cds-HMPREF2948_06680;Parent=gene-HMPREF2948_06680;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636708.1;locus_tag=HMPREF2948_06680;product=peptidase;pseudo=true;transl_table=11 KV814733.1 Genbank pseudogene 48980 49629 . - . ID=gene-HMPREF2948_06685;Name=HMPREF2948_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06685;pseudo=true KV814733.1 Protein Homology CDS 48980 49629 . - 0 ID=cds-HMPREF2948_06685;Parent=gene-HMPREF2948_06685;Note=catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction%3B frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005563253.1;locus_tag=HMPREF2948_06685;product=glutathionylspermidine synthase;pseudo=true;transl_table=11 KV814733.1 Genbank pseudogene 49629 49850 . - . ID=gene-HMPREF2948_06690;Name=HMPREF2948_06690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06690;pseudo=true KV814733.1 Protein Homology CDS 49629 49850 . - 0 ID=cds-HMPREF2948_06690;Parent=gene-HMPREF2948_06690;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690296.1;locus_tag=HMPREF2948_06690;product=transcriptional regulator;pseudo=true;transl_table=11 KV814733.1 Genbank gene 49928 50437 . - . ID=gene-HMPREF2948_06695;Name=HMPREF2948_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06695 KV814733.1 Protein Homology CDS 49928 50437 . - 0 ID=cds-OFQ17969.1;Parent=gene-HMPREF2948_06695;Dbxref=NCBI_GP:OFQ17969.1;Name=OFQ17969.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CNN6.1;locus_tag=HMPREF2948_06695;product=hypothetical protein;protein_id=OFQ17969.1;transl_table=11 KV814733.1 Genbank gene 50522 51466 . + . ID=gene-HMPREF2948_06700;Name=HMPREF2948_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06700 KV814733.1 Protein Homology CDS 50522 51466 . + 0 ID=cds-OFQ17970.1;Parent=gene-HMPREF2948_06700;Dbxref=NCBI_GP:OFQ17970.1;Name=OFQ17970.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694243.1;locus_tag=HMPREF2948_06700;product=ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=OFQ17970.1;transl_table=11 KV814733.1 Genbank gene 51563 52627 . + . ID=gene-HMPREF2948_06705;Name=HMPREF2948_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06705 KV814733.1 Protein Homology CDS 51563 52627 . + 0 ID=cds-OFQ17971.1;Parent=gene-HMPREF2948_06705;Dbxref=NCBI_GP:OFQ17971.1;Name=OFQ17971.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500034.1;locus_tag=HMPREF2948_06705;product=ABC transporter permease;protein_id=OFQ17971.1;transl_table=11 KV814733.1 Genbank gene 52686 53657 . - . ID=gene-HMPREF2948_06710;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=HMPREF2948_06710 KV814733.1 Protein Homology CDS 52686 53657 . - 0 ID=cds-OFQ17972.1;Parent=gene-HMPREF2948_06710;Dbxref=NCBI_GP:OFQ17972.1;Name=OFQ17972.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698972.1;locus_tag=HMPREF2948_06710;product=transcriptional regulator CysB;protein_id=OFQ17972.1;transl_table=11 KV814733.1 Genbank gene 53670 54578 . - . ID=gene-HMPREF2948_06715;Name=HMPREF2948_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06715 KV814733.1 Protein Homology CDS 53670 54578 . - 0 ID=cds-OFQ18032.1;Parent=gene-HMPREF2948_06715;Dbxref=NCBI_GP:OFQ18032.1;Name=OFQ18032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001352462.1;locus_tag=HMPREF2948_06715;product=23S rRNA pseudouridylate synthase B;protein_id=OFQ18032.1;transl_table=11 KV814733.1 Genbank gene 54720 55343 . - . ID=gene-HMPREF2948_06720;Name=HMPREF2948_06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06720 KV814733.1 Protein Homology CDS 54720 55343 . - 0 ID=cds-OFQ17973.1;Parent=gene-HMPREF2948_06720;Dbxref=NCBI_GP:OFQ17973.1;Name=OFQ17973.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355608.1;locus_tag=HMPREF2948_06720;product=threonylcarbamoyl-AMP synthase;protein_id=OFQ17973.1;transl_table=11 KV814733.1 Genbank gene 55673 55999 . - . ID=gene-HMPREF2948_06725;Name=HMPREF2948_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06725 KV814733.1 Protein Homology CDS 55673 55999 . - 0 ID=cds-OFQ17974.1;Parent=gene-HMPREF2948_06725;Dbxref=NCBI_GP:OFQ17974.1;Name=OFQ17974.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009875118.1;locus_tag=HMPREF2948_06725;product=hypothetical protein;protein_id=OFQ17974.1;transl_table=11 KV814733.1 Genbank gene 56161 56946 . - . ID=gene-HMPREF2948_06730;Name=HMPREF2948_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06730 KV814733.1 GeneMarkS+ CDS 56161 56946 . - 0 ID=cds-OFQ17975.1;Parent=gene-HMPREF2948_06730;Dbxref=NCBI_GP:OFQ17975.1;Name=OFQ17975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06730;product=hypothetical protein;protein_id=OFQ17975.1;transl_table=11 KV814733.1 Genbank gene 56939 57382 . - . ID=gene-HMPREF2948_06735;Name=HMPREF2948_06735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06735 KV814733.1 GeneMarkS+ CDS 56939 57382 . - 0 ID=cds-OFQ17976.1;Parent=gene-HMPREF2948_06735;Dbxref=NCBI_GP:OFQ17976.1;Name=OFQ17976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06735;product=hypothetical protein;protein_id=OFQ17976.1;transl_table=11 KV814733.1 Genbank gene 57382 61242 . - . ID=gene-HMPREF2948_06740;Name=HMPREF2948_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06740 KV814733.1 Protein Homology CDS 57382 61242 . - 0 ID=cds-OFQ17977.1;Parent=gene-HMPREF2948_06740;Dbxref=NCBI_GP:OFQ17977.1;Name=OFQ17977.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012072991.1;locus_tag=HMPREF2948_06740;product=hypothetical protein;protein_id=OFQ17977.1;transl_table=11 KV814733.1 Genbank gene 61323 61829 . - . ID=gene-HMPREF2948_06745;Name=HMPREF2948_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06745 KV814733.1 Protein Homology CDS 61323 61829 . - 0 ID=cds-OFQ18033.1;Parent=gene-HMPREF2948_06745;Dbxref=NCBI_GP:OFQ18033.1;Name=OFQ18033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015484727.1;locus_tag=HMPREF2948_06745;product=phage tail protein;protein_id=OFQ18033.1;transl_table=11 KV814733.1 Genbank gene 61847 62617 . - . ID=gene-HMPREF2948_06750;Name=HMPREF2948_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06750 KV814733.1 Protein Homology CDS 61847 62617 . - 0 ID=cds-OFQ17978.1;Parent=gene-HMPREF2948_06750;Dbxref=NCBI_GP:OFQ17978.1;Name=OFQ17978.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015484726.1;locus_tag=HMPREF2948_06750;product=phage tail protein;protein_id=OFQ17978.1;transl_table=11 KV814733.1 Genbank gene 62620 63351 . - . ID=gene-HMPREF2948_06755;Name=HMPREF2948_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06755 KV814733.1 Protein Homology CDS 62620 63351 . - 0 ID=cds-OFQ18034.1;Parent=gene-HMPREF2948_06755;Dbxref=NCBI_GP:OFQ18034.1;Name=OFQ18034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011848415.1;locus_tag=HMPREF2948_06755;product=phage tail protein;protein_id=OFQ18034.1;transl_table=11 KV814733.1 Genbank gene 63426 63716 . - . ID=gene-HMPREF2948_06760;Name=HMPREF2948_06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06760 KV814733.1 GeneMarkS+ CDS 63426 63716 . - 0 ID=cds-OFQ17979.1;Parent=gene-HMPREF2948_06760;Dbxref=NCBI_GP:OFQ17979.1;Name=OFQ17979.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06760;product=hypothetical protein;protein_id=OFQ17979.1;transl_table=11 KV814733.1 Genbank gene 63849 64184 . - . ID=gene-HMPREF2948_06765;Name=HMPREF2948_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06765 KV814733.1 Protein Homology CDS 63849 64184 . - 0 ID=cds-OFQ17980.1;Parent=gene-HMPREF2948_06765;Dbxref=NCBI_GP:OFQ17980.1;Name=OFQ17980.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701500.1;locus_tag=HMPREF2948_06765;product=phage tail protein;protein_id=OFQ17980.1;transl_table=11 KV814733.1 Genbank gene 64194 67595 . - . ID=gene-HMPREF2948_06770;Name=HMPREF2948_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06770 KV814733.1 Protein Homology CDS 64194 67595 . - 0 ID=cds-OFQ17981.1;Parent=gene-HMPREF2948_06770;Dbxref=NCBI_GP:OFQ17981.1;Name=OFQ17981.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006251687.1;locus_tag=HMPREF2948_06770;product=phage tail tape measure protein;protein_id=OFQ17981.1;transl_table=11 KV814733.1 Genbank gene 67653 67916 . - . ID=gene-HMPREF2948_06775;Name=HMPREF2948_06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06775 KV814733.1 Protein Homology CDS 67653 67916 . - 0 ID=cds-OFQ17982.1;Parent=gene-HMPREF2948_06775;Dbxref=NCBI_GP:OFQ17982.1;Name=OFQ17982.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005714514.1;locus_tag=HMPREF2948_06775;product=hypothetical protein;protein_id=OFQ17982.1;transl_table=11 KV814733.1 Genbank gene 68012 68242 . - . ID=gene-HMPREF2948_06780;Name=HMPREF2948_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06780 KV814733.1 Protein Homology CDS 68012 68242 . - 0 ID=cds-OFQ18035.1;Parent=gene-HMPREF2948_06780;Dbxref=NCBI_GP:OFQ18035.1;Name=OFQ18035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651221.1;locus_tag=HMPREF2948_06780;product=hypothetical protein;protein_id=OFQ18035.1;transl_table=11 KV814733.1 Genbank gene 68287 68694 . - . ID=gene-HMPREF2948_06785;Name=HMPREF2948_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06785 KV814733.1 Protein Homology CDS 68287 68694 . - 0 ID=cds-OFQ17983.1;Parent=gene-HMPREF2948_06785;Dbxref=NCBI_GP:OFQ17983.1;Name=OFQ17983.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005661739.1;locus_tag=HMPREF2948_06785;product=hypothetical protein;protein_id=OFQ17983.1;transl_table=11 KV814733.1 Genbank gene 68809 69462 . - . ID=gene-HMPREF2948_06790;Name=HMPREF2948_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06790 KV814733.1 Protein Homology CDS 68809 69462 . - 0 ID=cds-OFQ17984.1;Parent=gene-HMPREF2948_06790;Dbxref=NCBI_GP:OFQ17984.1;Name=OFQ17984.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718611.1;locus_tag=HMPREF2948_06790;product=hypothetical protein;protein_id=OFQ17984.1;transl_table=11 KV814733.1 Genbank gene 69466 69810 . - . ID=gene-HMPREF2948_06795;Name=HMPREF2948_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06795 KV814733.1 Protein Homology CDS 69466 69810 . - 0 ID=cds-OFQ17985.1;Parent=gene-HMPREF2948_06795;Dbxref=NCBI_GP:OFQ17985.1;Name=OFQ17985.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718612.1;locus_tag=HMPREF2948_06795;product=hypothetical protein;protein_id=OFQ17985.1;transl_table=11 KV814733.1 Genbank gene 69812 70294 . - . ID=gene-HMPREF2948_06800;Name=HMPREF2948_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06800 KV814733.1 Protein Homology CDS 69812 70294 . - 0 ID=cds-OFQ17986.1;Parent=gene-HMPREF2948_06800;Dbxref=NCBI_GP:OFQ17986.1;Name=OFQ17986.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771353.1;locus_tag=HMPREF2948_06800;product=hypothetical protein;protein_id=OFQ17986.1;transl_table=11 KV814733.1 Genbank gene 70287 70610 . - . ID=gene-HMPREF2948_06805;Name=HMPREF2948_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06805 KV814733.1 Protein Homology CDS 70287 70610 . - 0 ID=cds-OFQ17987.1;Parent=gene-HMPREF2948_06805;Dbxref=NCBI_GP:OFQ17987.1;Name=OFQ17987.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718616.1;locus_tag=HMPREF2948_06805;product=head-tail adaptor protein;protein_id=OFQ17987.1;transl_table=11 KV814733.1 Genbank gene 70607 70927 . - . ID=gene-HMPREF2948_06810;Name=HMPREF2948_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06810 KV814733.1 Protein Homology CDS 70607 70927 . - 0 ID=cds-OFQ17988.1;Parent=gene-HMPREF2948_06810;Dbxref=NCBI_GP:OFQ17988.1;Name=OFQ17988.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006252749.1;locus_tag=HMPREF2948_06810;product=hypothetical protein;protein_id=OFQ17988.1;transl_table=11 KV814733.1 Genbank gene 70977 72203 . - . ID=gene-HMPREF2948_06815;Name=HMPREF2948_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06815 KV814733.1 Protein Homology CDS 70977 72203 . - 0 ID=cds-OFQ17989.1;Parent=gene-HMPREF2948_06815;Dbxref=NCBI_GP:OFQ17989.1;Name=OFQ17989.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006251696.1;locus_tag=HMPREF2948_06815;product=phage capsid protein;protein_id=OFQ17989.1;transl_table=11 KV814733.1 Genbank gene 72267 72869 . - . ID=gene-HMPREF2948_06820;Name=HMPREF2948_06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06820 KV814733.1 Protein Homology CDS 72267 72869 . - 0 ID=cds-OFQ17990.1;Parent=gene-HMPREF2948_06820;Dbxref=NCBI_GP:OFQ17990.1;Name=OFQ17990.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718621.1;locus_tag=HMPREF2948_06820;product=peptidase;protein_id=OFQ17990.1;transl_table=11 KV814733.1 Genbank gene 72862 74082 . - . ID=gene-HMPREF2948_06825;Name=HMPREF2948_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06825 KV814733.1 Protein Homology CDS 72862 74082 . - 0 ID=cds-OFQ17991.1;Parent=gene-HMPREF2948_06825;Dbxref=NCBI_GP:OFQ17991.1;Name=OFQ17991.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_000923127.1;locus_tag=HMPREF2948_06825;product=phage portal protein;protein_id=OFQ17991.1;transl_table=11 KV814733.1 Genbank gene 74228 75934 . - . ID=gene-HMPREF2948_06830;Name=HMPREF2948_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06830 KV814733.1 Protein Homology CDS 74228 75934 . - 0 ID=cds-OFQ17992.1;Parent=gene-HMPREF2948_06830;Dbxref=NCBI_GP:OFQ17992.1;Name=OFQ17992.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006251699.1;locus_tag=HMPREF2948_06830;product=terminase;protein_id=OFQ17992.1;transl_table=11 KV814733.1 Genbank gene 75931 76413 . - . ID=gene-HMPREF2948_06835;Name=HMPREF2948_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06835 KV814733.1 Protein Homology CDS 75931 76413 . - 0 ID=cds-OFQ17993.1;Parent=gene-HMPREF2948_06835;Dbxref=NCBI_GP:OFQ17993.1;Name=OFQ17993.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006718629.1;locus_tag=HMPREF2948_06835;product=terminase;protein_id=OFQ17993.1;transl_table=11 KV814733.1 Genbank gene 76542 76892 . - . ID=gene-HMPREF2948_06840;Name=HMPREF2948_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06840 KV814733.1 Protein Homology CDS 76542 76892 . - 0 ID=cds-OFQ17994.1;Parent=gene-HMPREF2948_06840;Dbxref=NCBI_GP:OFQ17994.1;Name=OFQ17994.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001140102.1;locus_tag=HMPREF2948_06840;product=DNAse;protein_id=OFQ17994.1;transl_table=11 KV814733.1 Genbank gene 76936 77085 . - . ID=gene-HMPREF2948_06845;Name=HMPREF2948_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06845 KV814733.1 Protein Homology CDS 76936 77085 . - 0 ID=cds-OFQ18036.1;Parent=gene-HMPREF2948_06845;Dbxref=NCBI_GP:OFQ18036.1;Name=OFQ18036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006249196.1;locus_tag=HMPREF2948_06845;product=lytic protein Rz1;protein_id=OFQ18036.1;transl_table=11 KV814733.1 Genbank gene 77123 77488 . - . ID=gene-HMPREF2948_06850;Name=HMPREF2948_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06850 KV814733.1 GeneMarkS+ CDS 77123 77488 . - 0 ID=cds-OFQ17995.1;Parent=gene-HMPREF2948_06850;Dbxref=NCBI_GP:OFQ17995.1;Name=OFQ17995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06850;product=hypothetical protein;protein_id=OFQ17995.1;transl_table=11 KV814733.1 Genbank gene 77585 78136 . - . ID=gene-HMPREF2948_06855;Name=HMPREF2948_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06855 KV814733.1 Protein Homology CDS 77585 78136 . - 0 ID=cds-OFQ17996.1;Parent=gene-HMPREF2948_06855;Dbxref=NCBI_GP:OFQ17996.1;Name=OFQ17996.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005579225.1;locus_tag=HMPREF2948_06855;product=glycoside hydrolase;protein_id=OFQ17996.1;transl_table=11 KV814733.1 Genbank gene 78117 78374 . - . ID=gene-HMPREF2948_06860;Name=HMPREF2948_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06860 KV814733.1 Protein Homology CDS 78117 78374 . - 0 ID=cds-OFQ17997.1;Parent=gene-HMPREF2948_06860;Dbxref=NCBI_GP:OFQ17997.1;Name=OFQ17997.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250098.1;locus_tag=HMPREF2948_06860;product=hypothetical protein;protein_id=OFQ17997.1;transl_table=11 KV814733.1 Genbank gene 78686 79564 . - . ID=gene-HMPREF2948_06865;Name=HMPREF2948_06865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06865 KV814733.1 Protein Homology CDS 78686 79564 . - 0 ID=cds-OFQ17998.1;Parent=gene-HMPREF2948_06865;Dbxref=NCBI_GP:OFQ17998.1;Name=OFQ17998.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996390.1;locus_tag=HMPREF2948_06865;product=antirepressor;protein_id=OFQ17998.1;transl_table=11 KV814733.1 Genbank gene 79869 80363 . - . ID=gene-HMPREF2948_06870;Name=HMPREF2948_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06870 KV814733.1 GeneMarkS+ CDS 79869 80363 . - 0 ID=cds-OFQ17999.1;Parent=gene-HMPREF2948_06870;Dbxref=NCBI_GP:OFQ17999.1;Name=OFQ17999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06870;product=hypothetical protein;protein_id=OFQ17999.1;transl_table=11 KV814733.1 Genbank gene 80541 80909 . - . ID=gene-HMPREF2948_06875;Name=HMPREF2948_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06875 KV814733.1 Protein Homology CDS 80541 80909 . - 0 ID=cds-OFQ18000.1;Parent=gene-HMPREF2948_06875;Dbxref=NCBI_GP:OFQ18000.1;Name=OFQ18000.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005643898.1;locus_tag=HMPREF2948_06875;product=antitermination protein;protein_id=OFQ18000.1;transl_table=11 KV814733.1 Genbank gene 80899 81477 . - . ID=gene-HMPREF2948_06880;Name=HMPREF2948_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06880 KV814733.1 Protein Homology CDS 80899 81477 . - 0 ID=cds-OFQ18001.1;Parent=gene-HMPREF2948_06880;Dbxref=NCBI_GP:OFQ18001.1;Name=OFQ18001.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015702302.1;locus_tag=HMPREF2948_06880;product=NinG recombination protein;protein_id=OFQ18001.1;transl_table=11 KV814733.1 Genbank gene 81581 81787 . - . ID=gene-HMPREF2948_06885;Name=HMPREF2948_06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06885 KV814733.1 Protein Homology CDS 81581 81787 . - 0 ID=cds-OFQ18002.1;Parent=gene-HMPREF2948_06885;Dbxref=NCBI_GP:OFQ18002.1;Name=OFQ18002.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662153.1;locus_tag=HMPREF2948_06885;product=elongation factor Tu;protein_id=OFQ18002.1;transl_table=11 KV814733.1 Genbank gene 81867 82280 . - . ID=gene-HMPREF2948_06890;Name=HMPREF2948_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06890 KV814733.1 Protein Homology CDS 81867 82280 . - 0 ID=cds-OFQ18003.1;Parent=gene-HMPREF2948_06890;Dbxref=NCBI_GP:OFQ18003.1;Name=OFQ18003.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668544.1;locus_tag=HMPREF2948_06890;product=recombinase;protein_id=OFQ18003.1;transl_table=11 KV814733.1 Genbank gene 82280 83665 . - . ID=gene-HMPREF2948_06895;Name=HMPREF2948_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06895 KV814733.1 Protein Homology CDS 82280 83665 . - 0 ID=cds-OFQ18004.1;Parent=gene-HMPREF2948_06895;Dbxref=NCBI_GP:OFQ18004.1;Name=OFQ18004.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005756635.1;locus_tag=HMPREF2948_06895;product=DNA helicase;protein_id=OFQ18004.1;transl_table=11 KV814733.1 Genbank pseudogene 84073 84420 . - . ID=gene-HMPREF2948_06900;Name=HMPREF2948_06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_06900;pseudo=true KV814733.1 Protein Homology CDS 84073 84420 . - 0 ID=cds-HMPREF2948_06900;Parent=gene-HMPREF2948_06900;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650516.1;locus_tag=HMPREF2948_06900;product=DNA-binding protein;pseudo=true;transl_table=11 KV814733.1 Genbank gene 84577 84807 . - . ID=gene-HMPREF2948_06905;Name=HMPREF2948_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06905 KV814733.1 Protein Homology CDS 84577 84807 . - 0 ID=cds-OFQ18005.1;Parent=gene-HMPREF2948_06905;Dbxref=NCBI_GP:OFQ18005.1;Name=OFQ18005.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633905.1;locus_tag=HMPREF2948_06905;product=hypothetical protein;protein_id=OFQ18005.1;transl_table=11 KV814733.1 Genbank gene 84862 85062 . - . ID=gene-HMPREF2948_06910;Name=HMPREF2948_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06910 KV814733.1 Protein Homology CDS 84862 85062 . - 0 ID=cds-OFQ18006.1;Parent=gene-HMPREF2948_06910;Dbxref=NCBI_GP:OFQ18006.1;Name=OFQ18006.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005720263.1;locus_tag=HMPREF2948_06910;product=transcriptional regulator;protein_id=OFQ18006.1;transl_table=11 KV814733.1 Genbank gene 85373 85957 . + . ID=gene-HMPREF2948_06915;Name=HMPREF2948_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06915 KV814733.1 Protein Homology CDS 85373 85957 . + 0 ID=cds-OFQ18037.1;Parent=gene-HMPREF2948_06915;Dbxref=NCBI_GP:OFQ18037.1;Name=OFQ18037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651306.1;locus_tag=HMPREF2948_06915;product=transcriptional regulator;protein_id=OFQ18037.1;transl_table=11 KV814733.1 Genbank gene 85985 86491 . + . ID=gene-HMPREF2948_06920;Name=HMPREF2948_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06920 KV814733.1 GeneMarkS+ CDS 85985 86491 . + 0 ID=cds-OFQ18007.1;Parent=gene-HMPREF2948_06920;Dbxref=NCBI_GP:OFQ18007.1;Name=OFQ18007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06920;product=hypothetical protein;protein_id=OFQ18007.1;transl_table=11 KV814733.1 Genbank gene 86654 87142 . + . ID=gene-HMPREF2948_06925;Name=HMPREF2948_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06925 KV814733.1 GeneMarkS+ CDS 86654 87142 . + 0 ID=cds-OFQ18008.1;Parent=gene-HMPREF2948_06925;Dbxref=NCBI_GP:OFQ18008.1;Name=OFQ18008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06925;product=hypothetical protein;protein_id=OFQ18008.1;transl_table=11 KV814733.1 Genbank gene 87144 87929 . + . ID=gene-HMPREF2948_06930;Name=HMPREF2948_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06930 KV814733.1 GeneMarkS+ CDS 87144 87929 . + 0 ID=cds-OFQ18009.1;Parent=gene-HMPREF2948_06930;Dbxref=NCBI_GP:OFQ18009.1;Name=OFQ18009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06930;product=hypothetical protein;protein_id=OFQ18009.1;transl_table=11 KV814733.1 Genbank gene 88645 88717 . + . ID=gene-HMPREF2948_06935;Name=HMPREF2948_06935;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_06935 KV814733.1 tRNAscan-SE tRNA 88645 88717 . + . ID=rna-HMPREF2948_06935;Parent=gene-HMPREF2948_06935;anticodon=(pos:88677..88679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_06935;product=tRNA-Lys KV814733.1 tRNAscan-SE exon 88645 88717 . + . ID=exon-HMPREF2948_06935-1;Parent=rna-HMPREF2948_06935;anticodon=(pos:88677..88679);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_06935;product=tRNA-Lys KV814733.1 Genbank gene 88825 89028 . + . ID=gene-HMPREF2948_06940;Name=HMPREF2948_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06940 KV814733.1 Protein Homology CDS 88825 89028 . + 0 ID=cds-OFQ18010.1;Parent=gene-HMPREF2948_06940;Dbxref=NCBI_GP:OFQ18010.1;Name=OFQ18010.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:YP_003344833.1;locus_tag=HMPREF2948_06940;product=hypothetical protein;protein_id=OFQ18010.1;transl_table=11 KV814733.1 Genbank gene 89434 89700 . + . ID=gene-HMPREF2948_06945;Name=HMPREF2948_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06945 KV814733.1 GeneMarkS+ CDS 89434 89700 . + 0 ID=cds-OFQ18011.1;Parent=gene-HMPREF2948_06945;Dbxref=NCBI_GP:OFQ18011.1;Name=OFQ18011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06945;product=hypothetical protein;protein_id=OFQ18011.1;transl_table=11 KV814733.1 Genbank gene 89678 90244 . + . ID=gene-HMPREF2948_06950;Name=HMPREF2948_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06950 KV814733.1 Protein Homology CDS 89678 90244 . + 0 ID=cds-OFQ18012.1;Parent=gene-HMPREF2948_06950;Dbxref=NCBI_GP:OFQ18012.1;Name=OFQ18012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015484686.1;locus_tag=HMPREF2948_06950;product=hypothetical protein;protein_id=OFQ18012.1;transl_table=11 KV814733.1 Genbank gene 90201 90512 . + . ID=gene-HMPREF2948_06955;Name=HMPREF2948_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06955 KV814733.1 GeneMarkS+ CDS 90201 90512 . + 0 ID=cds-OFQ18013.1;Parent=gene-HMPREF2948_06955;Dbxref=NCBI_GP:OFQ18013.1;Name=OFQ18013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06955;product=hypothetical protein;protein_id=OFQ18013.1;transl_table=11 KV814733.1 Genbank gene 90664 91314 . + . ID=gene-HMPREF2948_06960;Name=HMPREF2948_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06960 KV814733.1 Protein Homology CDS 90664 91314 . + 0 ID=cds-OFQ18014.1;Parent=gene-HMPREF2948_06960;Dbxref=NCBI_GP:OFQ18014.1;Name=OFQ18014.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014390705.1;locus_tag=HMPREF2948_06960;product=ribonuclease H;protein_id=OFQ18014.1;transl_table=11 KV814733.1 Genbank gene 91317 91931 . + . ID=gene-HMPREF2948_06965;Name=HMPREF2948_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06965 KV814733.1 Protein Homology CDS 91317 91931 . + 0 ID=cds-OFQ18015.1;Parent=gene-HMPREF2948_06965;Dbxref=NCBI_GP:OFQ18015.1;Name=OFQ18015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633892.1;locus_tag=HMPREF2948_06965;product=single-stranded DNA-binding protein;protein_id=OFQ18015.1;transl_table=11 KV814733.1 Genbank gene 91944 92396 . + . ID=gene-HMPREF2948_06970;Name=HMPREF2948_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06970 KV814733.1 Protein Homology CDS 91944 92396 . + 0 ID=cds-OFQ18016.1;Parent=gene-HMPREF2948_06970;Dbxref=NCBI_GP:OFQ18016.1;Name=OFQ18016.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005607789.1;locus_tag=HMPREF2948_06970;product=single-stranded DNA-binding protein;protein_id=OFQ18016.1;transl_table=11 KV814733.1 Genbank gene 92406 92585 . + . ID=gene-HMPREF2948_06975;Name=HMPREF2948_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06975 KV814733.1 GeneMarkS+ CDS 92406 92585 . + 0 ID=cds-OFQ18017.1;Parent=gene-HMPREF2948_06975;Dbxref=NCBI_GP:OFQ18017.1;Name=OFQ18017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06975;product=hypothetical protein;protein_id=OFQ18017.1;transl_table=11 KV814733.1 Genbank gene 92744 93088 . + . ID=gene-HMPREF2948_06980;Name=HMPREF2948_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06980 KV814733.1 GeneMarkS+ CDS 92744 93088 . + 0 ID=cds-OFQ18018.1;Parent=gene-HMPREF2948_06980;Dbxref=NCBI_GP:OFQ18018.1;Name=OFQ18018.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_06980;product=hypothetical protein;protein_id=OFQ18018.1;transl_table=11 KV814733.1 Genbank gene 93063 93638 . + . ID=gene-HMPREF2948_06985;Name=HMPREF2948_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06985 KV814733.1 Protein Homology CDS 93063 93638 . + 0 ID=cds-OFQ18019.1;Parent=gene-HMPREF2948_06985;Dbxref=NCBI_GP:OFQ18019.1;Name=OFQ18019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015939643.1;locus_tag=HMPREF2948_06985;product=hypothetical protein;protein_id=OFQ18019.1;transl_table=11 KV814733.1 Genbank gene 93625 93984 . + . ID=gene-HMPREF2948_06990;Name=HMPREF2948_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06990 KV814733.1 Protein Homology CDS 93625 93984 . + 0 ID=cds-OFQ18020.1;Parent=gene-HMPREF2948_06990;Dbxref=NCBI_GP:OFQ18020.1;Name=OFQ18020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012054997.1;locus_tag=HMPREF2948_06990;product=hypothetical protein;protein_id=OFQ18020.1;transl_table=11 KV814733.1 Genbank gene 93981 94769 . + . ID=gene-HMPREF2948_06995;Name=HMPREF2948_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_06995 KV814733.1 Protein Homology CDS 93981 94769 . + 0 ID=cds-OFQ18021.1;Parent=gene-HMPREF2948_06995;Dbxref=NCBI_GP:OFQ18021.1;Name=OFQ18021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668259.1;locus_tag=HMPREF2948_06995;product=DNA methyltransferase;protein_id=OFQ18021.1;transl_table=11 KV814733.1 Genbank gene 94788 95267 . + . ID=gene-HMPREF2948_07000;Name=HMPREF2948_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07000 KV814733.1 Protein Homology CDS 94788 95267 . + 0 ID=cds-OFQ18022.1;Parent=gene-HMPREF2948_07000;Dbxref=NCBI_GP:OFQ18022.1;Name=OFQ18022.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671518.1;locus_tag=HMPREF2948_07000;product=hypothetical protein;protein_id=OFQ18022.1;transl_table=11 KV814733.1 Genbank gene 95326 96195 . + . ID=gene-HMPREF2948_07005;Name=HMPREF2948_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07005 KV814733.1 Protein Homology CDS 95326 96195 . + 0 ID=cds-OFQ18023.1;Parent=gene-HMPREF2948_07005;Dbxref=NCBI_GP:OFQ18023.1;Name=OFQ18023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633889.1;locus_tag=HMPREF2948_07005;product=hypothetical protein;protein_id=OFQ18023.1;transl_table=11 KV814733.1 Genbank gene 96437 96670 . + . ID=gene-HMPREF2948_07010;Name=HMPREF2948_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07010 KV814733.1 Protein Homology CDS 96437 96670 . + 0 ID=cds-OFQ18038.1;Parent=gene-HMPREF2948_07010;Dbxref=NCBI_GP:OFQ18038.1;Name=OFQ18038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006250692.1;locus_tag=HMPREF2948_07010;product=hypothetical protein;protein_id=OFQ18038.1;transl_table=11 KV814733.1 Genbank gene 96680 97714 . + . ID=gene-HMPREF2948_07015;Name=HMPREF2948_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07015 KV814733.1 Protein Homology CDS 96680 97714 . + 0 ID=cds-OFQ18024.1;Parent=gene-HMPREF2948_07015;Dbxref=NCBI_GP:OFQ18024.1;Name=OFQ18024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356014.1;locus_tag=HMPREF2948_07015;product=integrase;protein_id=OFQ18024.1;transl_table=11 KV814733.1 Genbank gene 97880 98749 . - . ID=gene-HMPREF2948_07020;Name=HMPREF2948_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07020 KV814733.1 Protein Homology CDS 97880 98749 . - 0 ID=cds-OFQ18025.1;Parent=gene-HMPREF2948_07020;Dbxref=NCBI_GP:OFQ18025.1;Name=OFQ18025.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694247.1;locus_tag=HMPREF2948_07020;product=succinate--CoA ligase subunit alpha;protein_id=OFQ18025.1;transl_table=11 KV814733.1 Genbank gene 98752 99918 . - . ID=gene-HMPREF2948_07025;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=HMPREF2948_07025 KV814733.1 Protein Homology CDS 98752 99918 . - 0 ID=cds-OFQ18026.1;Parent=gene-HMPREF2948_07025;Dbxref=NCBI_GP:OFQ18026.1;Name=OFQ18026.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550899.1;locus_tag=HMPREF2948_07025;product=succinate--CoA ligase subunit beta;protein_id=OFQ18026.1;transl_table=11 KV814733.1 Genbank gene 100063 101241 . + . ID=gene-HMPREF2948_07030;Name=HMPREF2948_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07030 KV814733.1 Protein Homology CDS 100063 101241 . + 0 ID=cds-OFQ18027.1;Parent=gene-HMPREF2948_07030;Dbxref=NCBI_GP:OFQ18027.1;Name=OFQ18027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698954.1;locus_tag=HMPREF2948_07030;product=hydrogenase expression protein;protein_id=OFQ18027.1;transl_table=11 KV814733.1 Genbank gene 101343 102569 . - . ID=gene-HMPREF2948_07035;Name=HMPREF2948_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07035 KV814733.1 Protein Homology CDS 101343 102569 . - 0 ID=cds-OFQ18028.1;Parent=gene-HMPREF2948_07035;Dbxref=NCBI_GP:OFQ18028.1;Name=OFQ18028.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005596570.1;locus_tag=HMPREF2948_07035;product=dihydrolipoamide succinyltransferase;protein_id=OFQ18028.1;transl_table=11 KV814733.1 Genbank gene 102627 105434 . - . ID=gene-HMPREF2948_07040;Name=HMPREF2948_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07040 KV814733.1 Protein Homology CDS 102627 105434 . - 0 ID=cds-OFQ18029.1;Parent=gene-HMPREF2948_07040;Dbxref=NCBI_GP:OFQ18029.1;Name=OFQ18029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628456.1;locus_tag=HMPREF2948_07040;product=2-oxoglutarate dehydrogenase subunit E1;protein_id=OFQ18029.1;transl_table=11 KV814733.1 Genbank gene 105584 106288 . - . ID=gene-HMPREF2948_07045;Name=HMPREF2948_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07045 KV814733.1 Protein Homology CDS 105584 106288 . - 0 ID=cds-OFQ18030.1;Parent=gene-HMPREF2948_07045;Dbxref=NCBI_GP:OFQ18030.1;Name=OFQ18030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699454.1;locus_tag=HMPREF2948_07045;product=competence protein ComEA;protein_id=OFQ18030.1;transl_table=11 KV814733.1 Genbank gene 106414 107076 . - . ID=gene-HMPREF2948_07050;Name=HMPREF2948_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07050 KV814733.1 Protein Homology CDS 106414 107076 . - 0 ID=cds-OFQ18031.1;Parent=gene-HMPREF2948_07050;Dbxref=NCBI_GP:OFQ18031.1;Name=OFQ18031.1;Note=binds to the HflBKC complex which modulates FtsH activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649826.1;locus_tag=HMPREF2948_07050;product=BAX inhibitor protein;protein_id=OFQ18031.1;transl_table=11 KV814733.1 Genbank gene 107543 108013 . - . ID=gene-HMPREF2948_07055;Name=HMPREF2948_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07055 KV814733.1 Protein Homology CDS 107543 108013 . - 0 ID=cds-OFQ17803.1;Parent=gene-HMPREF2948_07055;Dbxref=NCBI_GP:OFQ17803.1;Name=OFQ17803.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652758.1;locus_tag=HMPREF2948_07055;product=hypothetical protein;protein_id=OFQ17803.1;transl_table=11 KV814733.1 Genbank gene 108055 108696 . - . ID=gene-HMPREF2948_07060;Name=HMPREF2948_07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07060 KV814733.1 Protein Homology CDS 108055 108696 . - 0 ID=cds-OFQ17804.1;Parent=gene-HMPREF2948_07060;Dbxref=NCBI_GP:OFQ17804.1;Name=OFQ17804.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44202.1;locus_tag=HMPREF2948_07060;product=cytochrome C biogenesis protein;protein_id=OFQ17804.1;transl_table=11 KV814733.1 Genbank gene 108708 109769 . - . ID=gene-HMPREF2948_07065;Name=HMPREF2948_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07065 KV814733.1 Protein Homology CDS 108708 109769 . - 0 ID=cds-OFQ17805.1;Parent=gene-HMPREF2948_07065;Dbxref=NCBI_GP:OFQ17805.1;Name=OFQ17805.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869216.1;locus_tag=HMPREF2948_07065;product=peptide methionine sulfoxide reductase;protein_id=OFQ17805.1;transl_table=11 KV814733.1 Genbank gene 110305 111021 . + . ID=gene-HMPREF2948_07070;Name=HMPREF2948_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07070 KV814733.1 Protein Homology CDS 110305 111021 . + 0 ID=cds-OFQ17806.1;Parent=gene-HMPREF2948_07070;Dbxref=NCBI_GP:OFQ17806.1;Name=OFQ17806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065273.1;locus_tag=HMPREF2948_07070;product=sugar fermentation stimulation protein SfsA;protein_id=OFQ17806.1;transl_table=11 KV814733.1 Genbank gene 111229 112416 . + . ID=gene-HMPREF2948_07075;Name=HMPREF2948_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07075 KV814733.1 Protein Homology CDS 111229 112416 . + 0 ID=cds-OFQ17807.1;Parent=gene-HMPREF2948_07075;Dbxref=NCBI_GP:OFQ17807.1;Name=OFQ17807.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695949.1;locus_tag=HMPREF2948_07075;product=tyrosine--tRNA ligase;protein_id=OFQ17807.1;transl_table=11 KV814733.1 Genbank gene 112492 113418 . + . ID=gene-HMPREF2948_07080;Name=HMPREF2948_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07080 KV814733.1 Protein Homology CDS 112492 113418 . + 0 ID=cds-OFQ17808.1;Parent=gene-HMPREF2948_07080;Dbxref=NCBI_GP:OFQ17808.1;Name=OFQ17808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700689.1;locus_tag=HMPREF2948_07080;product=fructokinase;protein_id=OFQ17808.1;transl_table=11 KV814733.1 Genbank gene 113483 114937 . + . ID=gene-HMPREF2948_07085;Name=HMPREF2948_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07085 KV814733.1 Protein Homology CDS 113483 114937 . + 0 ID=cds-OFQ17809.1;Parent=gene-HMPREF2948_07085;Dbxref=NCBI_GP:OFQ17809.1;Name=OFQ17809.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695945.1;locus_tag=HMPREF2948_07085;product=fructosidase;protein_id=OFQ17809.1;transl_table=11 KV814733.1 Genbank gene 114947 115564 . + . ID=gene-HMPREF2948_07090;Name=HMPREF2948_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07090 KV814733.1 Protein Homology CDS 114947 115564 . + 0 ID=cds-OFQ17810.1;Parent=gene-HMPREF2948_07090;Dbxref=NCBI_GP:OFQ17810.1;Name=OFQ17810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695944.1;locus_tag=HMPREF2948_07090;product=protein-tyrosine-phosphatase;protein_id=OFQ17810.1;transl_table=11 KV814733.1 Genbank gene 115561 116808 . + . ID=gene-HMPREF2948_07095;Name=HMPREF2948_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07095 KV814733.1 Protein Homology CDS 115561 116808 . + 0 ID=cds-OFQ17811.1;Parent=gene-HMPREF2948_07095;Dbxref=NCBI_GP:OFQ17811.1;Name=OFQ17811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698978.1;locus_tag=HMPREF2948_07095;product=sugar transporter;protein_id=OFQ17811.1;transl_table=11 KV814733.1 Genbank gene 116858 118507 . - . ID=gene-HMPREF2948_07100;Name=HMPREF2948_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07100 KV814733.1 Protein Homology CDS 116858 118507 . - 0 ID=cds-OFQ17812.1;Parent=gene-HMPREF2948_07100;Dbxref=NCBI_GP:OFQ17812.1;Name=OFQ17812.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014325901.1;locus_tag=HMPREF2948_07100;product=glucose-6-phosphate isomerase;protein_id=OFQ17812.1;transl_table=11 KV814733.1 Genbank gene 118564 119646 . - . ID=gene-HMPREF2948_07105;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=HMPREF2948_07105 KV814733.1 Protein Homology CDS 118564 119646 . - 0 ID=cds-OFQ17813.1;Parent=gene-HMPREF2948_07105;Dbxref=NCBI_GP:OFQ17813.1;Name=OFQ17813.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693598.1;locus_tag=HMPREF2948_07105;product=alanine racemase;protein_id=OFQ17813.1;transl_table=11 KV814733.1 Genbank gene 119670 121076 . - . ID=gene-HMPREF2948_07110;Name=HMPREF2948_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07110 KV814733.1 Protein Homology CDS 119670 121076 . - 0 ID=cds-OFQ17814.1;Parent=gene-HMPREF2948_07110;Dbxref=NCBI_GP:OFQ17814.1;Name=OFQ17814.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500638.1;locus_tag=HMPREF2948_07110;product=replicative DNA helicase;protein_id=OFQ17814.1;transl_table=11 KV814733.1 Genbank gene 121225 122661 . - . ID=gene-HMPREF2948_07115;Name=HMPREF2948_07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07115 KV814733.1 Protein Homology CDS 121225 122661 . - 0 ID=cds-OFQ17815.1;Parent=gene-HMPREF2948_07115;Dbxref=NCBI_GP:OFQ17815.1;Name=OFQ17815.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005716034.1;locus_tag=HMPREF2948_07115;product=pyruvate kinase;protein_id=OFQ17815.1;transl_table=11 KV814733.1 Genbank gene 122888 122964 . + . ID=gene-HMPREF2948_07120;Name=HMPREF2948_07120;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_07120 KV814733.1 tRNAscan-SE tRNA 122888 122964 . + . ID=rna-HMPREF2948_07120;Parent=gene-HMPREF2948_07120;anticodon=(pos:122922..122924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_07120;product=tRNA-Val KV814733.1 tRNAscan-SE exon 122888 122964 . + . ID=exon-HMPREF2948_07120-1;Parent=rna-HMPREF2948_07120;anticodon=(pos:122922..122924);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_07120;product=tRNA-Val KV814733.1 Genbank gene 123156 124373 . + . ID=gene-HMPREF2948_07125;Name=HMPREF2948_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07125 KV814733.1 Protein Homology CDS 123156 124373 . + 0 ID=cds-OFQ17816.1;Parent=gene-HMPREF2948_07125;Dbxref=NCBI_GP:OFQ17816.1;Name=OFQ17816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525426.1;locus_tag=HMPREF2948_07125;product=preprotein translocase;protein_id=OFQ17816.1;transl_table=11 KV814733.1 Genbank gene 124534 125562 . - . ID=gene-HMPREF2948_07130;Name=HMPREF2948_07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07130 KV814733.1 Protein Homology CDS 124534 125562 . - 0 ID=cds-OFQ17900.1;Parent=gene-HMPREF2948_07130;Dbxref=NCBI_GP:OFQ17900.1;Name=OFQ17900.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719235.1;locus_tag=HMPREF2948_07130;product=DNA primase;protein_id=OFQ17900.1;transl_table=11 KV814733.1 Genbank gene 126296 126721 . - . ID=gene-HMPREF2948_07135;Name=HMPREF2948_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07135 KV814733.1 GeneMarkS+ CDS 126296 126721 . - 0 ID=cds-OFQ17817.1;Parent=gene-HMPREF2948_07135;Dbxref=NCBI_GP:OFQ17817.1;Name=OFQ17817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07135;product=hypothetical protein;protein_id=OFQ17817.1;transl_table=11 KV814733.1 Genbank gene 126723 127103 . - . ID=gene-HMPREF2948_07140;Name=HMPREF2948_07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07140 KV814733.1 Protein Homology CDS 126723 127103 . - 0 ID=cds-OFQ17818.1;Parent=gene-HMPREF2948_07140;Dbxref=NCBI_GP:OFQ17818.1;Name=OFQ17818.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698465.1;locus_tag=HMPREF2948_07140;product=hypothetical protein;protein_id=OFQ17818.1;transl_table=11 KV814733.1 Genbank gene 127096 127296 . - . ID=gene-HMPREF2948_07145;Name=HMPREF2948_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07145 KV814733.1 Protein Homology CDS 127096 127296 . - 0 ID=cds-OFQ17819.1;Parent=gene-HMPREF2948_07145;Dbxref=NCBI_GP:OFQ17819.1;Name=OFQ17819.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701656.1;locus_tag=HMPREF2948_07145;product=hypothetical protein;protein_id=OFQ17819.1;transl_table=11 KV814733.1 Genbank gene 127286 127516 . - . ID=gene-HMPREF2948_07150;Name=HMPREF2948_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07150 KV814733.1 Protein Homology CDS 127286 127516 . - 0 ID=cds-OFQ17901.1;Parent=gene-HMPREF2948_07150;Dbxref=NCBI_GP:OFQ17901.1;Name=OFQ17901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656482.1;locus_tag=HMPREF2948_07150;product=hypothetical protein;protein_id=OFQ17901.1;transl_table=11 KV814733.1 Genbank pseudogene 127484 127711 . - . ID=gene-HMPREF2948_07155;Name=HMPREF2948_07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_07155;pseudo=true KV814733.1 Protein Homology CDS 127484 127711 . - 0 ID=cds-HMPREF2948_07155;Parent=gene-HMPREF2948_07155;Note=incomplete%3B partial in the middle of a contig%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698527.1;locus_tag=HMPREF2948_07155;product=hypothetical protein;pseudo=true;transl_table=11 KV814733.1 Genbank gene 127704 127886 . - . ID=gene-HMPREF2948_07160;Name=HMPREF2948_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07160 KV814733.1 Protein Homology CDS 127704 127886 . - 0 ID=cds-OFQ17820.1;Parent=gene-HMPREF2948_07160;Dbxref=NCBI_GP:OFQ17820.1;Name=OFQ17820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702035.1;locus_tag=HMPREF2948_07160;product=iduronate-2-sulfatase;protein_id=OFQ17820.1;transl_table=11 KV814733.1 Genbank gene 127886 128131 . - . ID=gene-HMPREF2948_07165;Name=HMPREF2948_07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07165 KV814733.1 Protein Homology CDS 127886 128131 . - 0 ID=cds-OFQ17821.1;Parent=gene-HMPREF2948_07165;Dbxref=NCBI_GP:OFQ17821.1;Name=OFQ17821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702034.1;locus_tag=HMPREF2948_07165;product=hypothetical protein;protein_id=OFQ17821.1;transl_table=11 KV814733.1 Genbank gene 128124 128735 . - . ID=gene-HMPREF2948_07170;Name=HMPREF2948_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07170 KV814733.1 Protein Homology CDS 128124 128735 . - 0 ID=cds-OFQ17902.1;Parent=gene-HMPREF2948_07170;Dbxref=NCBI_GP:OFQ17902.1;Name=OFQ17902.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698588.1;locus_tag=HMPREF2948_07170;product=Ash family protein;protein_id=OFQ17902.1;transl_table=11 KV814733.1 Genbank gene 128847 129176 . - . ID=gene-HMPREF2948_07175;Name=HMPREF2948_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07175 KV814733.1 Protein Homology CDS 128847 129176 . - 0 ID=cds-OFQ17903.1;Parent=gene-HMPREF2948_07175;Dbxref=NCBI_GP:OFQ17903.1;Name=OFQ17903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698522.1;locus_tag=HMPREF2948_07175;product=hypothetical protein;protein_id=OFQ17903.1;transl_table=11 KV814733.1 Genbank gene 129207 129416 . - . ID=gene-HMPREF2948_07180;Name=HMPREF2948_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07180 KV814733.1 Protein Homology CDS 129207 129416 . - 0 ID=cds-OFQ17822.1;Parent=gene-HMPREF2948_07180;Dbxref=NCBI_GP:OFQ17822.1;Name=OFQ17822.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524867.1;locus_tag=HMPREF2948_07180;product=transcriptional regulator;protein_id=OFQ17822.1;transl_table=11 KV814733.1 Genbank gene 129558 130574 . - . ID=gene-HMPREF2948_07185;Name=HMPREF2948_07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07185 KV814733.1 Protein Homology CDS 129558 130574 . - 0 ID=cds-OFQ17823.1;Parent=gene-HMPREF2948_07185;Dbxref=NCBI_GP:OFQ17823.1;Name=OFQ17823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656486.1;locus_tag=HMPREF2948_07185;product=hypothetical protein;protein_id=OFQ17823.1;transl_table=11 KV814733.1 Genbank gene 131413 131973 . - . ID=gene-HMPREF2948_07190;Name=HMPREF2948_07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07190 KV814733.1 GeneMarkS+ CDS 131413 131973 . - 0 ID=cds-OFQ17824.1;Parent=gene-HMPREF2948_07190;Dbxref=NCBI_GP:OFQ17824.1;Name=OFQ17824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07190;product=hypothetical protein;protein_id=OFQ17824.1;transl_table=11 KV814733.1 Genbank gene 131966 132292 . - . ID=gene-HMPREF2948_07195;Name=HMPREF2948_07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07195 KV814733.1 GeneMarkS+ CDS 131966 132292 . - 0 ID=cds-OFQ17825.1;Parent=gene-HMPREF2948_07195;Dbxref=NCBI_GP:OFQ17825.1;Name=OFQ17825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07195;product=hypothetical protein;protein_id=OFQ17825.1;transl_table=11 KV814733.1 Genbank gene 132520 134187 . - . ID=gene-HMPREF2948_07200;Name=HMPREF2948_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07200 KV814733.1 Protein Homology CDS 132520 134187 . - 0 ID=cds-OFQ17826.1;Parent=gene-HMPREF2948_07200;Dbxref=NCBI_GP:OFQ17826.1;Name=OFQ17826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701665.1;locus_tag=HMPREF2948_07200;product=terminase;protein_id=OFQ17826.1;transl_table=11 KV814733.1 Genbank gene 134195 134563 . - . ID=gene-HMPREF2948_07205;Name=HMPREF2948_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07205 KV814733.1 Protein Homology CDS 134195 134563 . - 0 ID=cds-OFQ17827.1;Parent=gene-HMPREF2948_07205;Dbxref=NCBI_GP:OFQ17827.1;Name=OFQ17827.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698535.1;locus_tag=HMPREF2948_07205;product=terminase;protein_id=OFQ17827.1;transl_table=11 KV814733.1 Genbank gene 135043 135354 . - . ID=gene-HMPREF2948_07210;Name=HMPREF2948_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07210 KV814733.1 Protein Homology CDS 135043 135354 . - 0 ID=cds-OFQ17828.1;Parent=gene-HMPREF2948_07210;Dbxref=NCBI_GP:OFQ17828.1;Name=OFQ17828.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641222.1;locus_tag=HMPREF2948_07210;product=hypothetical protein;protein_id=OFQ17828.1;transl_table=11 KV814733.1 Genbank gene 135341 135682 . - . ID=gene-HMPREF2948_07215;Name=HMPREF2948_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07215 KV814733.1 Protein Homology CDS 135341 135682 . - 0 ID=cds-OFQ17829.1;Parent=gene-HMPREF2948_07215;Dbxref=NCBI_GP:OFQ17829.1;Name=OFQ17829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719252.1;locus_tag=HMPREF2948_07215;product=head-tail adaptor protein;protein_id=OFQ17829.1;transl_table=11 KV814733.1 Genbank gene 135675 136901 . - . ID=gene-HMPREF2948_07220;Name=HMPREF2948_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07220 KV814733.1 Protein Homology CDS 135675 136901 . - 0 ID=cds-OFQ17830.1;Parent=gene-HMPREF2948_07220;Dbxref=NCBI_GP:OFQ17830.1;Name=OFQ17830.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698537.1;locus_tag=HMPREF2948_07220;product=phage portal protein;protein_id=OFQ17830.1;transl_table=11 KV814733.1 Genbank gene 136903 137469 . - . ID=gene-HMPREF2948_07225;Name=HMPREF2948_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07225 KV814733.1 Protein Homology CDS 136903 137469 . - 0 ID=cds-OFQ17831.1;Parent=gene-HMPREF2948_07225;Dbxref=NCBI_GP:OFQ17831.1;Name=OFQ17831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525430.1;locus_tag=HMPREF2948_07225;product=peptidase;protein_id=OFQ17831.1;transl_table=11 KV814733.1 Genbank gene 137515 138705 . - . ID=gene-HMPREF2948_07230;Name=HMPREF2948_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07230 KV814733.1 Protein Homology CDS 137515 138705 . - 0 ID=cds-OFQ17832.1;Parent=gene-HMPREF2948_07230;Dbxref=NCBI_GP:OFQ17832.1;Name=OFQ17832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525147.1;locus_tag=HMPREF2948_07230;product=capsid protein;protein_id=OFQ17832.1;transl_table=11 KV814733.1 Genbank gene 139542 140279 . + . ID=gene-HMPREF2948_07235;Name=HMPREF2948_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07235 KV814733.1 Protein Homology CDS 139542 140279 . + 0 ID=cds-OFQ17833.1;Parent=gene-HMPREF2948_07235;Dbxref=NCBI_GP:OFQ17833.1;Name=OFQ17833.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012478358.1;locus_tag=HMPREF2948_07235;product=toxin HipA;protein_id=OFQ17833.1;transl_table=11 KV814733.1 Genbank gene 140276 141091 . + . ID=gene-HMPREF2948_07240;Name=HMPREF2948_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07240 KV814733.1 Protein Homology CDS 140276 141091 . + 0 ID=cds-OFQ17834.1;Parent=gene-HMPREF2948_07240;Dbxref=NCBI_GP:OFQ17834.1;Name=OFQ17834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656648.1;locus_tag=HMPREF2948_07240;product=hypothetical protein;protein_id=OFQ17834.1;transl_table=11 KV814733.1 Genbank gene 141537 143075 . + . ID=gene-HMPREF2948_07245;Name=HMPREF2948_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07245 KV814733.1 Protein Homology CDS 141537 143075 . + 0 ID=cds-OFQ17835.1;Parent=gene-HMPREF2948_07245;Dbxref=NCBI_GP:OFQ17835.1;Name=OFQ17835.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695929.1;locus_tag=HMPREF2948_07245;product=polysaccharide biosynthesis protein;protein_id=OFQ17835.1;transl_table=11 KV814733.1 Genbank gene 143056 144024 . + . ID=gene-HMPREF2948_07250;Name=HMPREF2948_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07250 KV814733.1 Protein Homology CDS 143056 144024 . + 0 ID=cds-OFQ17836.1;Parent=gene-HMPREF2948_07250;Dbxref=NCBI_GP:OFQ17836.1;Name=OFQ17836.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699483.1;locus_tag=HMPREF2948_07250;product=polysaccharide pyruvyl transferase;protein_id=OFQ17836.1;transl_table=11 KV814733.1 Genbank gene 144012 144755 . + . ID=gene-HMPREF2948_07255;Name=HMPREF2948_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07255 KV814733.1 Protein Homology CDS 144012 144755 . + 0 ID=cds-OFQ17837.1;Parent=gene-HMPREF2948_07255;Dbxref=NCBI_GP:OFQ17837.1;Name=OFQ17837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005704075.1;locus_tag=HMPREF2948_07255;product=hypothetical protein;protein_id=OFQ17837.1;transl_table=11 KV814733.1 Genbank gene 144804 145466 . + . ID=gene-HMPREF2948_07260;Name=HMPREF2948_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07260 KV814733.1 Protein Homology CDS 144804 145466 . + 0 ID=cds-OFQ17838.1;Parent=gene-HMPREF2948_07260;Dbxref=NCBI_GP:OFQ17838.1;Name=OFQ17838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003685629.1;locus_tag=HMPREF2948_07260;product=NAD(P)H-dependent oxidoreductase;protein_id=OFQ17838.1;transl_table=11 KV814733.1 Genbank gene 145508 146485 . - . ID=gene-HMPREF2948_07265;Name=HMPREF2948_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07265 KV814733.1 Protein Homology CDS 145508 146485 . - 0 ID=cds-OFQ17839.1;Parent=gene-HMPREF2948_07265;Dbxref=NCBI_GP:OFQ17839.1;Name=OFQ17839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695925.1;locus_tag=HMPREF2948_07265;product=cobalt transporter;protein_id=OFQ17839.1;transl_table=11 KV814733.1 Genbank gene 146489 147121 . - . ID=gene-HMPREF2948_07270;Name=HMPREF2948_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07270 KV814733.1 Protein Homology CDS 146489 147121 . - 0 ID=cds-OFQ17840.1;Parent=gene-HMPREF2948_07270;Dbxref=NCBI_GP:OFQ17840.1;Name=OFQ17840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698591.1;locus_tag=HMPREF2948_07270;product=ABC transporter;protein_id=OFQ17840.1;transl_table=11 KV814733.1 Genbank gene 147469 149139 . + . ID=gene-HMPREF2948_07275;Name=HMPREF2948_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07275 KV814733.1 Protein Homology CDS 147469 149139 . + 0 ID=cds-OFQ17841.1;Parent=gene-HMPREF2948_07275;Dbxref=NCBI_GP:OFQ17841.1;Name=OFQ17841.1;Note=ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525864.1;locus_tag=HMPREF2948_07275;product=energy-dependent translational throttle protein EttA;protein_id=OFQ17841.1;transl_table=11 KV814733.1 Genbank gene 149195 149551 . + . ID=gene-HMPREF2948_07280;Name=HMPREF2948_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07280 KV814733.1 Protein Homology CDS 149195 149551 . + 0 ID=cds-OFQ17842.1;Parent=gene-HMPREF2948_07280;Dbxref=NCBI_GP:OFQ17842.1;Name=OFQ17842.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695921.1;locus_tag=HMPREF2948_07280;product=hypothetical protein;protein_id=OFQ17842.1;transl_table=11 KV814733.1 Genbank gene 149599 149919 . - . ID=gene-HMPREF2948_07285;Name=HMPREF2948_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07285 KV814733.1 Protein Homology CDS 149599 149919 . - 0 ID=cds-OFQ17843.1;Parent=gene-HMPREF2948_07285;Dbxref=NCBI_GP:OFQ17843.1;Name=OFQ17843.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650140.1;locus_tag=HMPREF2948_07285;product=translation initiation factor Sui1;protein_id=OFQ17843.1;transl_table=11 KV814733.1 Genbank gene 149921 150613 . - . ID=gene-HMPREF2948_07290;Name=HMPREF2948_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07290 KV814733.1 Protein Homology CDS 149921 150613 . - 0 ID=cds-OFQ17844.1;Parent=gene-HMPREF2948_07290;Dbxref=NCBI_GP:OFQ17844.1;Name=OFQ17844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695919.1;locus_tag=HMPREF2948_07290;product=orotidine 5'-phosphate decarboxylase;protein_id=OFQ17844.1;transl_table=11 KV814733.1 Genbank gene 150635 151813 . - . ID=gene-HMPREF2948_07295;Name=HMPREF2948_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07295 KV814733.1 Protein Homology CDS 150635 151813 . - 0 ID=cds-OFQ17845.1;Parent=gene-HMPREF2948_07295;Dbxref=NCBI_GP:OFQ17845.1;Name=OFQ17845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540866.1;locus_tag=HMPREF2948_07295;product=hypothetical protein;protein_id=OFQ17845.1;transl_table=11 KV814733.1 Genbank gene 151813 152106 . - . ID=gene-HMPREF2948_07300;Name=HMPREF2948_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07300 KV814733.1 Protein Homology CDS 151813 152106 . - 0 ID=cds-OFQ17846.1;Parent=gene-HMPREF2948_07300;Dbxref=NCBI_GP:OFQ17846.1;Name=OFQ17846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650128.1;locus_tag=HMPREF2948_07300;product=hypothetical protein;protein_id=OFQ17846.1;transl_table=11 KV814733.1 Genbank gene 152200 152484 . - . ID=gene-HMPREF2948_07305;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=HMPREF2948_07305 KV814733.1 Protein Homology CDS 152200 152484 . - 0 ID=cds-OFQ17847.1;Parent=gene-HMPREF2948_07305;Dbxref=NCBI_GP:OFQ17847.1;Name=OFQ17847.1;Note=This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control;gbkey=CDS;gene=ihfB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005764489.1;locus_tag=HMPREF2948_07305;product=integration host factor subunit beta;protein_id=OFQ17847.1;transl_table=11 KV814733.1 Genbank gene 152636 154285 . - . ID=gene-HMPREF2948_07310;Name=HMPREF2948_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07310 KV814733.1 Protein Homology CDS 152636 154285 . - 0 ID=cds-OFQ17848.1;Parent=gene-HMPREF2948_07310;Dbxref=NCBI_GP:OFQ17848.1;Name=OFQ17848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869157.1;locus_tag=HMPREF2948_07310;product=30S ribosomal protein S1;protein_id=OFQ17848.1;transl_table=11 KV814733.1 Genbank gene 154382 155059 . - . ID=gene-HMPREF2948_07315;Name=HMPREF2948_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07315 KV814733.1 Protein Homology CDS 154382 155059 . - 0 ID=cds-OFQ17849.1;Parent=gene-HMPREF2948_07315;Dbxref=NCBI_GP:OFQ17849.1;Name=OFQ17849.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005650123.1;locus_tag=HMPREF2948_07315;product=cytidylate kinase;protein_id=OFQ17849.1;transl_table=11 KV814733.1 Genbank gene 155441 158308 . + . ID=gene-HMPREF2948_07320;Name=HMPREF2948_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07320 KV814733.1 Protein Homology CDS 155441 158308 . + 0 ID=cds-OFQ17850.1;Parent=gene-HMPREF2948_07320;Dbxref=NCBI_GP:OFQ17850.1;Name=OFQ17850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005638229.1;locus_tag=HMPREF2948_07320;product=TonB-dependent receptor;protein_id=OFQ17850.1;transl_table=11 KV814733.1 Genbank gene 158406 159095 . - . ID=gene-HMPREF2948_07325;Name=HMPREF2948_07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07325 KV814733.1 Protein Homology CDS 158406 159095 . - 0 ID=cds-OFQ17851.1;Parent=gene-HMPREF2948_07325;Dbxref=NCBI_GP:OFQ17851.1;Name=OFQ17851.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694230.1;locus_tag=HMPREF2948_07325;product=5'-methylthioadenosine nucleosidase;protein_id=OFQ17851.1;transl_table=11 KV814733.1 Genbank gene 159095 159811 . - . ID=gene-HMPREF2948_07330;Name=HMPREF2948_07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07330 KV814733.1 Protein Homology CDS 159095 159811 . - 0 ID=cds-OFQ17852.1;Parent=gene-HMPREF2948_07330;Dbxref=NCBI_GP:OFQ17852.1;Name=OFQ17852.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695910.1;locus_tag=HMPREF2948_07330;product=hypothetical protein;protein_id=OFQ17852.1;transl_table=11 KV814733.1 Genbank gene 159815 161539 . - . ID=gene-HMPREF2948_07335;Name=HMPREF2948_07335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07335 KV814733.1 Protein Homology CDS 159815 161539 . - 0 ID=cds-OFQ17853.1;Parent=gene-HMPREF2948_07335;Dbxref=NCBI_GP:OFQ17853.1;Name=OFQ17853.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016533985.1;locus_tag=HMPREF2948_07335;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=OFQ17853.1;transl_table=11 KV814733.1 Genbank gene 161641 162327 . - . ID=gene-HMPREF2948_07340;Name=HMPREF2948_07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07340 KV814733.1 Protein Homology CDS 161641 162327 . - 0 ID=cds-OFQ17854.1;Parent=gene-HMPREF2948_07340;Dbxref=NCBI_GP:OFQ17854.1;Name=OFQ17854.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006996480.1;locus_tag=HMPREF2948_07340;product=protein-disulfide isomerase;protein_id=OFQ17854.1;transl_table=11 KV814733.1 Genbank gene 163604 164671 . - . ID=gene-HMPREF2948_07345;Name=HMPREF2948_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07345 KV814733.1 Protein Homology CDS 163604 164671 . - 0 ID=cds-OFQ17855.1;Parent=gene-HMPREF2948_07345;Dbxref=NCBI_GP:OFQ17855.1;Name=OFQ17855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693878.1;locus_tag=HMPREF2948_07345;product=hypothetical protein;protein_id=OFQ17855.1;transl_table=11 KV814733.1 Genbank gene 164853 165959 . + . ID=gene-HMPREF2948_07350;Name=HMPREF2948_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07350 KV814733.1 Protein Homology CDS 164853 165959 . + 0 ID=cds-OFQ17856.1;Parent=gene-HMPREF2948_07350;Dbxref=NCBI_GP:OFQ17856.1;Name=OFQ17856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199525.1;locus_tag=HMPREF2948_07350;product=hypothetical protein;protein_id=OFQ17856.1;transl_table=11 KV814733.1 Genbank gene 165934 166296 . + . ID=gene-HMPREF2948_07355;Name=HMPREF2948_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07355 KV814733.1 Protein Homology CDS 165934 166296 . + 0 ID=cds-OFQ17857.1;Parent=gene-HMPREF2948_07355;Dbxref=NCBI_GP:OFQ17857.1;Name=OFQ17857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651689.1;locus_tag=HMPREF2948_07355;product=hypothetical protein;protein_id=OFQ17857.1;transl_table=11 KV814733.1 Genbank gene 166305 166583 . + . ID=gene-HMPREF2948_07360;Name=HMPREF2948_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07360 KV814733.1 Protein Homology CDS 166305 166583 . + 0 ID=cds-OFQ17858.1;Parent=gene-HMPREF2948_07360;Dbxref=NCBI_GP:OFQ17858.1;Name=OFQ17858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065236.1;locus_tag=HMPREF2948_07360;product=hypothetical protein;protein_id=OFQ17858.1;transl_table=11 KV814733.1 Genbank gene 166606 167151 . + . ID=gene-HMPREF2948_07365;Name=HMPREF2948_07365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07365 KV814733.1 GeneMarkS+ CDS 166606 167151 . + 0 ID=cds-OFQ17859.1;Parent=gene-HMPREF2948_07365;Dbxref=NCBI_GP:OFQ17859.1;Name=OFQ17859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07365;product=hypothetical protein;protein_id=OFQ17859.1;transl_table=11 KV814733.1 Genbank gene 167199 167759 . - . ID=gene-HMPREF2948_07370;Name=HMPREF2948_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07370 KV814733.1 Protein Homology CDS 167199 167759 . - 0 ID=cds-OFQ17860.1;Parent=gene-HMPREF2948_07370;Dbxref=NCBI_GP:OFQ17860.1;Name=OFQ17860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547254.1;locus_tag=HMPREF2948_07370;product=superoxide dismutase;protein_id=OFQ17860.1;transl_table=11 KV814733.1 Genbank gene 167868 169277 . - . ID=gene-HMPREF2948_07375;Name=HMPREF2948_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07375 KV814733.1 Protein Homology CDS 167868 169277 . - 0 ID=cds-OFQ17861.1;Parent=gene-HMPREF2948_07375;Dbxref=NCBI_GP:OFQ17861.1;Name=OFQ17861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44280.1;locus_tag=HMPREF2948_07375;product=hypothetical protein;protein_id=OFQ17861.1;transl_table=11 KV814733.1 Genbank gene 169366 171066 . + . ID=gene-HMPREF2948_07380;Name=HMPREF2948_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07380 KV814733.1 Protein Homology CDS 169366 171066 . + 0 ID=cds-OFQ17862.1;Parent=gene-HMPREF2948_07380;Dbxref=NCBI_GP:OFQ17862.1;Name=OFQ17862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065234.1;locus_tag=HMPREF2948_07380;product=peptide ABC transporter substrate-binding protein;protein_id=OFQ17862.1;transl_table=11 KV814733.1 Genbank gene 171066 172031 . + . ID=gene-HMPREF2948_07385;Name=HMPREF2948_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07385 KV814733.1 Protein Homology CDS 171066 172031 . + 0 ID=cds-OFQ17863.1;Parent=gene-HMPREF2948_07385;Dbxref=NCBI_GP:OFQ17863.1;Name=OFQ17863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45286.1;locus_tag=HMPREF2948_07385;product=peptide ABC transporter permease;protein_id=OFQ17863.1;transl_table=11 KV814733.1 Genbank gene 172021 172908 . + . ID=gene-HMPREF2948_07390;Name=HMPREF2948_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07390 KV814733.1 Protein Homology CDS 172021 172908 . + 0 ID=cds-OFQ17864.1;Parent=gene-HMPREF2948_07390;Dbxref=NCBI_GP:OFQ17864.1;Name=OFQ17864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005722791.1;locus_tag=HMPREF2948_07390;product=peptide ABC transporter permease;protein_id=OFQ17864.1;transl_table=11 KV814733.1 Genbank gene 172912 173967 . + . ID=gene-HMPREF2948_07395;Name=HMPREF2948_07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07395 KV814733.1 Protein Homology CDS 172912 173967 . + 0 ID=cds-OFQ17865.1;Parent=gene-HMPREF2948_07395;Dbxref=NCBI_GP:OFQ17865.1;Name=OFQ17865.1;Note=involved in resistance to antimibial peptides;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550879.1;locus_tag=HMPREF2948_07395;product=peptide ABC transporter ATP-binding protein;protein_id=OFQ17865.1;transl_table=11 KV814733.1 Genbank gene 173967 174770 . + . ID=gene-HMPREF2948_07400;Name=HMPREF2948_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07400 KV814733.1 Protein Homology CDS 173967 174770 . + 0 ID=cds-OFQ17866.1;Parent=gene-HMPREF2948_07400;Dbxref=NCBI_GP:OFQ17866.1;Name=OFQ17866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698532.1;locus_tag=HMPREF2948_07400;product=peptide ABC transporter ATP-binding protein;protein_id=OFQ17866.1;transl_table=11 KV814733.1 Genbank gene 174865 175797 . + . ID=gene-HMPREF2948_07405;Name=HMPREF2948_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07405 KV814733.1 Protein Homology CDS 174865 175797 . + 0 ID=cds-OFQ17867.1;Parent=gene-HMPREF2948_07405;Dbxref=NCBI_GP:OFQ17867.1;Name=OFQ17867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005596403.1;locus_tag=HMPREF2948_07405;product=sodium transporter;protein_id=OFQ17867.1;transl_table=11 KV814733.1 Genbank gene 175858 177720 . - . ID=gene-HMPREF2948_07410;Name=HMPREF2948_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07410 KV814733.1 Protein Homology CDS 175858 177720 . - 0 ID=cds-OFQ17868.1;Parent=gene-HMPREF2948_07410;Dbxref=NCBI_GP:OFQ17868.1;Name=OFQ17868.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695889.1;locus_tag=HMPREF2948_07410;product=signal peptide peptidase SppA;protein_id=OFQ17868.1;transl_table=11 KV814733.1 Genbank gene 177831 178385 . + . ID=gene-HMPREF2948_07415;Name=HMPREF2948_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07415 KV814733.1 Protein Homology CDS 177831 178385 . + 0 ID=cds-OFQ17869.1;Parent=gene-HMPREF2948_07415;Dbxref=NCBI_GP:OFQ17869.1;Name=OFQ17869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011609062.1;locus_tag=HMPREF2948_07415;product=nitroreductase;protein_id=OFQ17869.1;transl_table=11 KV814733.1 Genbank gene 178431 179516 . - . ID=gene-HMPREF2948_07420;Name=HMPREF2948_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07420 KV814733.1 Protein Homology CDS 178431 179516 . - 0 ID=cds-OFQ17870.1;Parent=gene-HMPREF2948_07420;Dbxref=NCBI_GP:OFQ17870.1;Name=OFQ17870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698566.1;locus_tag=HMPREF2948_07420;product=homoserine O-acetyltransferase;protein_id=OFQ17870.1;transl_table=11 KV814733.1 Genbank gene 179674 180372 . + . ID=gene-HMPREF2948_07425;Name=HMPREF2948_07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07425 KV814733.1 Protein Homology CDS 179674 180372 . + 0 ID=cds-OFQ17871.1;Parent=gene-HMPREF2948_07425;Dbxref=NCBI_GP:OFQ17871.1;Name=OFQ17871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695885.1;locus_tag=HMPREF2948_07425;product=hypothetical protein;protein_id=OFQ17871.1;transl_table=11 KV814733.1 Genbank gene 180540 181892 . + . ID=gene-HMPREF2948_07430;Name=HMPREF2948_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07430 KV814733.1 Protein Homology CDS 180540 181892 . + 0 ID=cds-OFQ17872.1;Parent=gene-HMPREF2948_07430;Dbxref=NCBI_GP:OFQ17872.1;Name=OFQ17872.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644773.1;locus_tag=HMPREF2948_07430;product=lysine-sensitive aspartokinase 3;protein_id=OFQ17872.1;transl_table=11 KV814733.1 Genbank gene 182021 183319 . + . ID=gene-HMPREF2948_07435;Name=HMPREF2948_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07435 KV814733.1 Protein Homology CDS 182021 183319 . + 0 ID=cds-OFQ17873.1;Parent=gene-HMPREF2948_07435;Dbxref=NCBI_GP:OFQ17873.1;Name=OFQ17873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019842885.1;locus_tag=HMPREF2948_07435;product=adenylosuccinate synthase;protein_id=OFQ17873.1;transl_table=11 KV814733.1 Genbank gene 183384 184049 . + . ID=gene-HMPREF2948_07440;Name=HMPREF2948_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07440 KV814733.1 Protein Homology CDS 183384 184049 . + 0 ID=cds-OFQ17874.1;Parent=gene-HMPREF2948_07440;Dbxref=NCBI_GP:OFQ17874.1;Name=OFQ17874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005701367.1;locus_tag=HMPREF2948_07440;product=hypothetical protein;protein_id=OFQ17874.1;transl_table=11 KV814733.1 Genbank gene 184197 185258 . + . ID=gene-HMPREF2948_07445;Name=HMPREF2948_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07445 KV814733.1 Protein Homology CDS 184197 185258 . + 0 ID=cds-OFQ17875.1;Parent=gene-HMPREF2948_07445;Dbxref=NCBI_GP:OFQ17875.1;Name=OFQ17875.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065218.1;locus_tag=HMPREF2948_07445;product=hypothetical protein;protein_id=OFQ17875.1;transl_table=11 KV814733.1 Genbank gene 185357 185848 . - . ID=gene-HMPREF2948_07450;Name=ilvH;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=HMPREF2948_07450 KV814733.1 Protein Homology CDS 185357 185848 . - 0 ID=cds-OFQ17876.1;Parent=gene-HMPREF2948_07450;Dbxref=NCBI_GP:OFQ17876.1;Name=OFQ17876.1;Note=with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit;gbkey=CDS;gene=ilvH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005758939.1;locus_tag=HMPREF2948_07450;product=acetolactate synthase small subunit;protein_id=OFQ17876.1;transl_table=11 KV814733.1 Genbank gene 185848 187572 . - . ID=gene-HMPREF2948_07455;Name=HMPREF2948_07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07455 KV814733.1 Protein Homology CDS 185848 187572 . - 0 ID=cds-OFQ17877.1;Parent=gene-HMPREF2948_07455;Dbxref=NCBI_GP:OFQ17877.1;Name=OFQ17877.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695878.1;locus_tag=HMPREF2948_07455;product=acetolactate synthase 3 catalytic subunit;protein_id=OFQ17877.1;transl_table=11 KV814733.1 Genbank gene 187943 189163 . - . ID=gene-HMPREF2948_07460;Name=HMPREF2948_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07460 KV814733.1 Protein Homology CDS 187943 189163 . - 0 ID=cds-OFQ17878.1;Parent=gene-HMPREF2948_07460;Dbxref=NCBI_GP:OFQ17878.1;Name=OFQ17878.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695877.1;locus_tag=HMPREF2948_07460;product=beta-ketoacyl-[acyl-carrier-protein] synthase I;protein_id=OFQ17878.1;transl_table=11 KV814733.1 Genbank gene 189346 191355 . + . ID=gene-HMPREF2948_07465;Name=HMPREF2948_07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07465 KV814733.1 Protein Homology CDS 189346 191355 . + 0 ID=cds-OFQ17879.1;Parent=gene-HMPREF2948_07465;Dbxref=NCBI_GP:OFQ17879.1;Name=OFQ17879.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I2W9.1;locus_tag=HMPREF2948_07465;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MnmD/FAD-dependent cmnm(5)s(2)U34 oxidoreductase MnmC;protein_id=OFQ17879.1;transl_table=11 KV814733.1 Genbank gene 191388 192062 . - . ID=gene-HMPREF2948_07470;Name=HMPREF2948_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07470 KV814733.1 Protein Homology CDS 191388 192062 . - 0 ID=cds-OFQ17880.1;Parent=gene-HMPREF2948_07470;Dbxref=NCBI_GP:OFQ17880.1;Name=OFQ17880.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698475.1;locus_tag=HMPREF2948_07470;product=hypothetical protein;protein_id=OFQ17880.1;transl_table=11 KV814733.1 Genbank gene 192064 192780 . - . ID=gene-HMPREF2948_07475;Name=HMPREF2948_07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07475 KV814733.1 Protein Homology CDS 192064 192780 . - 0 ID=cds-OFQ17881.1;Parent=gene-HMPREF2948_07475;Dbxref=NCBI_GP:OFQ17881.1;Name=OFQ17881.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005589131.1;locus_tag=HMPREF2948_07475;product=hypothetical protein;protein_id=OFQ17881.1;transl_table=11 KV814733.1 Genbank gene 192892 193242 . + . ID=gene-HMPREF2948_07480;Name=HMPREF2948_07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07480 KV814733.1 Protein Homology CDS 192892 193242 . + 0 ID=cds-OFQ17882.1;Parent=gene-HMPREF2948_07480;Dbxref=NCBI_GP:OFQ17882.1;Name=OFQ17882.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698531.1;locus_tag=HMPREF2948_07480;product=hypothetical protein;protein_id=OFQ17882.1;transl_table=11 KV814733.1 Genbank gene 193333 193743 . + . ID=gene-HMPREF2948_07485;Name=HMPREF2948_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07485 KV814733.1 Protein Homology CDS 193333 193743 . + 0 ID=cds-OFQ17883.1;Parent=gene-HMPREF2948_07485;Dbxref=NCBI_GP:OFQ17883.1;Name=OFQ17883.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065209.1;locus_tag=HMPREF2948_07485;product=hypothetical protein;protein_id=OFQ17883.1;transl_table=11 KV814733.1 Genbank gene 193802 195052 . - . ID=gene-HMPREF2948_07490;Name=HMPREF2948_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07490 KV814733.1 Protein Homology CDS 193802 195052 . - 0 ID=cds-OFQ17884.1;Parent=gene-HMPREF2948_07490;Dbxref=NCBI_GP:OFQ17884.1;Name=OFQ17884.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005644722.1;locus_tag=HMPREF2948_07490;product=outer membrane-specific lipoprotein transporter subunit LolE;protein_id=OFQ17884.1;transl_table=11 KV814733.1 Genbank gene 195052 195735 . - . ID=gene-HMPREF2948_07495;Name=HMPREF2948_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07495 KV814733.1 Protein Homology CDS 195052 195735 . - 0 ID=cds-OFQ17885.1;Parent=gene-HMPREF2948_07495;Dbxref=NCBI_GP:OFQ17885.1;Name=OFQ17885.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693575.1;locus_tag=HMPREF2948_07495;product=ABC transporter ATP-binding protein;protein_id=OFQ17885.1;transl_table=11 KV814733.1 Genbank gene 195817 196458 . - . ID=gene-HMPREF2948_07500;Name=HMPREF2948_07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07500 KV814733.1 Protein Homology CDS 195817 196458 . - 0 ID=cds-OFQ17886.1;Parent=gene-HMPREF2948_07500;Dbxref=NCBI_GP:OFQ17886.1;Name=OFQ17886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272544.1;locus_tag=HMPREF2948_07500;product=dethiobiotin synthase;protein_id=OFQ17886.1;transl_table=11 KV814733.1 Genbank gene 196471 197250 . - . ID=gene-HMPREF2948_07505;Name=HMPREF2948_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07505 KV814733.1 Protein Homology CDS 196471 197250 . - 0 ID=cds-OFQ17887.1;Parent=gene-HMPREF2948_07505;Dbxref=NCBI_GP:OFQ17887.1;Name=OFQ17887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656861.1;locus_tag=HMPREF2948_07505;product=malonyl-[acyl-carrier protein] O-methyltransferase BioC;protein_id=OFQ17887.1;transl_table=11 KV814733.1 Genbank gene 197238 197885 . - . ID=gene-HMPREF2948_07510;Name=HMPREF2948_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07510 KV814733.1 Protein Homology CDS 197238 197885 . - 0 ID=cds-OFQ17888.1;Parent=gene-HMPREF2948_07510;Dbxref=NCBI_GP:OFQ17888.1;Name=OFQ17888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002212569.1;locus_tag=HMPREF2948_07510;product=hypothetical protein;protein_id=OFQ17888.1;transl_table=11 KV814733.1 Genbank gene 197895 199037 . - . ID=gene-HMPREF2948_07515;Name=HMPREF2948_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07515 KV814733.1 Protein Homology CDS 197895 199037 . - 0 ID=cds-OFQ17889.1;Parent=gene-HMPREF2948_07515;Dbxref=NCBI_GP:OFQ17889.1;Name=OFQ17889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637971.1;locus_tag=HMPREF2948_07515;product=8-amino-7-oxononanoate synthase;protein_id=OFQ17889.1;transl_table=11 KV814733.1 Genbank gene 199046 200335 . - . ID=gene-HMPREF2948_07520;Name=HMPREF2948_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07520 KV814733.1 Protein Homology CDS 199046 200335 . - 0 ID=cds-OFQ17904.1;Parent=gene-HMPREF2948_07520;Dbxref=NCBI_GP:OFQ17904.1;Name=OFQ17904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005667065.1;locus_tag=HMPREF2948_07520;product=adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA;protein_id=OFQ17904.1;transl_table=11 KV814733.1 Genbank gene 200357 201538 . - . ID=gene-HMPREF2948_07525;Name=HMPREF2948_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07525 KV814733.1 Protein Homology CDS 200357 201538 . - 0 ID=cds-OFQ17890.1;Parent=gene-HMPREF2948_07525;Dbxref=NCBI_GP:OFQ17890.1;Name=OFQ17890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005654778.1;locus_tag=HMPREF2948_07525;product=permease;protein_id=OFQ17890.1;transl_table=11 KV814733.1 Genbank gene 201538 202485 . - . ID=gene-HMPREF2948_07530;Name=HMPREF2948_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07530 KV814733.1 Protein Homology CDS 201538 202485 . - 0 ID=cds-OFQ17891.1;Parent=gene-HMPREF2948_07530;Dbxref=NCBI_GP:OFQ17891.1;Name=OFQ17891.1;Note=Catalyzes the reduction of hydroxypyruvate to form D-glycerate%2C using NADH as an electron donor;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45250.1;locus_tag=HMPREF2948_07530;product=glycerate dehydrogenase;protein_id=OFQ17891.1;transl_table=11 KV814733.1 Genbank gene 202552 203406 . - . ID=gene-HMPREF2948_07535;Name=HMPREF2948_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07535 KV814733.1 Protein Homology CDS 202552 203406 . - 0 ID=cds-OFQ17892.1;Parent=gene-HMPREF2948_07535;Dbxref=NCBI_GP:OFQ17892.1;Name=OFQ17892.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693586.1;locus_tag=HMPREF2948_07535;product=3-deoxy-8-phosphooctulonate synthase;protein_id=OFQ17892.1;transl_table=11 KV814733.1 Genbank gene 203419 204222 . - . ID=gene-HMPREF2948_07540;Name=HMPREF2948_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07540 KV814733.1 Protein Homology CDS 203419 204222 . - 0 ID=cds-OFQ17893.1;Parent=gene-HMPREF2948_07540;Dbxref=NCBI_GP:OFQ17893.1;Name=OFQ17893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637983.1;locus_tag=HMPREF2948_07540;product=hypothetical protein;protein_id=OFQ17893.1;transl_table=11 KV814733.1 Genbank gene 204222 205100 . - . ID=gene-HMPREF2948_07545;Name=HMPREF2948_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07545 KV814733.1 Protein Homology CDS 204222 205100 . - 0 ID=cds-OFQ17894.1;Parent=gene-HMPREF2948_07545;Dbxref=NCBI_GP:OFQ17894.1;Name=OFQ17894.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693587.1;locus_tag=HMPREF2948_07545;product=protein-(glutamine-N5) methyltransferase%2C release factor-specific;protein_id=OFQ17894.1;transl_table=11 KV814733.1 Genbank gene 205100 205540 . - . ID=gene-HMPREF2948_07550;Name=HMPREF2948_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07550 KV814733.1 Protein Homology CDS 205100 205540 . - 0 ID=cds-OFQ17895.1;Parent=gene-HMPREF2948_07550;Dbxref=NCBI_GP:OFQ17895.1;Name=OFQ17895.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005637986.1;locus_tag=HMPREF2948_07550;product=hypothetical protein;protein_id=OFQ17895.1;transl_table=11 KV814733.1 Genbank gene 205593 206675 . - . ID=gene-HMPREF2948_07555;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=HMPREF2948_07555 KV814733.1 Protein Homology CDS 205593 206675 . - 0 ID=cds-OFQ17896.1;Parent=gene-HMPREF2948_07555;Dbxref=NCBI_GP:OFQ17896.1;Name=OFQ17896.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;inference=EXISTENCE: similar to AA sequence:SwissProt:B0UUE6.1;locus_tag=HMPREF2948_07555;product=peptide chain release factor 1;protein_id=OFQ17896.1;transl_table=11 KV814733.1 Genbank gene 206773 207309 . - . ID=gene-HMPREF2948_07560;Name=HMPREF2948_07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07560 KV814733.1 Protein Homology CDS 206773 207309 . - 0 ID=cds-OFQ17897.1;Parent=gene-HMPREF2948_07560;Dbxref=NCBI_GP:OFQ17897.1;Name=OFQ17897.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633467.1;locus_tag=HMPREF2948_07560;product=ATPase;protein_id=OFQ17897.1;transl_table=11 KV814733.1 Genbank gene 207491 208354 . - . ID=gene-HMPREF2948_07565;Name=HMPREF2948_07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07565 KV814733.1 Protein Homology CDS 207491 208354 . - 0 ID=cds-OFQ17905.1;Parent=gene-HMPREF2948_07565;Dbxref=NCBI_GP:OFQ17905.1;Name=OFQ17905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009501101.1;locus_tag=HMPREF2948_07565;product=AraC family transcriptional regulator;protein_id=OFQ17905.1;transl_table=11 KV814733.1 Genbank gene 208485 208703 . + . ID=gene-HMPREF2948_07570;Name=HMPREF2948_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07570 KV814733.1 Protein Homology CDS 208485 208703 . + 0 ID=cds-OFQ17898.1;Parent=gene-HMPREF2948_07570;Dbxref=NCBI_GP:OFQ17898.1;Name=OFQ17898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007241575.1;locus_tag=HMPREF2948_07570;product=hypothetical protein;protein_id=OFQ17898.1;transl_table=11 KV814733.1 Genbank gene 208812 209426 . - . ID=gene-HMPREF2948_07575;Name=HMPREF2948_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07575 KV814733.1 Protein Homology CDS 208812 209426 . - 0 ID=cds-OFQ17899.1;Parent=gene-HMPREF2948_07575;Dbxref=NCBI_GP:OFQ17899.1;Name=OFQ17899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003678684.1;locus_tag=HMPREF2948_07575;product=cadmium transporter;protein_id=OFQ17899.1;transl_table=11 KV814733.1 Genbank gene 209736 210431 . - . ID=gene-HMPREF2948_07580;Name=HMPREF2948_07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07580 KV814733.1 Protein Homology CDS 209736 210431 . - 0 ID=cds-OFQ17906.1;Parent=gene-HMPREF2948_07580;Dbxref=NCBI_GP:OFQ17906.1;Name=OFQ17906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751811.1;locus_tag=HMPREF2948_07580;product=ABC transporter ATP-binding protein;protein_id=OFQ17906.1;transl_table=11 ##sequence-region KV814734.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814734.1 Genbank region 1 224 . + . ID=KV814734.1:1..224;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814734.1 Genbank pseudogene 1 218 . - . ID=gene-HMPREF2948_07585;Name=HMPREF2948_07585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_07585;pseudo=true KV814734.1 GeneMarkS+ CDS 1 218 . - 0 ID=cds-HMPREF2948_07585;Parent=gene-HMPREF2948_07585;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07585;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region KV814735.1 1 213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814735.1 Genbank region 1 213 . + . ID=KV814735.1:1..213;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814735.1 Genbank pseudogene 62 213 . - . ID=gene-HMPREF2948_07590;Name=HMPREF2948_07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_07590;pseudo=true KV814735.1 Protein Homology CDS 62 213 . - 2 ID=cds-HMPREF2948_07590;Parent=gene-HMPREF2948_07590;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690296.1;locus_tag=HMPREF2948_07590;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region KV814736.1 1 240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814736.1 Genbank region 1 240 . + . ID=KV814736.1:1..240;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814736.1 Genbank gene 1 240 . + . ID=gene-HMPREF2948_07595;Name=HMPREF2948_07595;end_range=240,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_07595;partial=true;start_range=.,1 KV814736.1 Genbank rRNA 1 240 . + . ID=rna-HMPREF2948_07595;Parent=gene-HMPREF2948_07595;end_range=240,.;gbkey=rRNA;locus_tag=HMPREF2948_07595;partial=true;product=23S ribosomal RNA;start_range=.,1 KV814736.1 Genbank exon 1 240 . + . ID=exon-HMPREF2948_07595-1;Parent=rna-HMPREF2948_07595;end_range=240,.;gbkey=rRNA;locus_tag=HMPREF2948_07595;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region KV814737.1 1 148547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814737.1 Genbank region 1 148547 . + . ID=KV814737.1:1..148547;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814737.1 Genbank pseudogene 1 135 . - . ID=gene-HMPREF2948_07600;Name=HMPREF2948_07600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_07600;pseudo=true KV814737.1 Protein Homology CDS 1 135 . - 0 ID=cds-HMPREF2948_07600;Parent=gene-HMPREF2948_07600;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656101.1;locus_tag=HMPREF2948_07600;product=transposase;pseudo=true;transl_table=11 KV814737.1 Genbank pseudogene 246 391 . - . ID=gene-HMPREF2948_07605;Name=HMPREF2948_07605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_07605;pseudo=true KV814737.1 Protein Homology CDS 246 391 . - 2 ID=cds-HMPREF2948_07605;Parent=gene-HMPREF2948_07605;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690296.1;locus_tag=HMPREF2948_07605;product=transcriptional regulator;pseudo=true;transl_table=11 KV814737.1 Genbank pseudogene 492 648 . - . ID=gene-HMPREF2948_07610;Name=HMPREF2948_07610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_07610;pseudo=true KV814737.1 Protein Homology CDS 492 648 . - 0 ID=cds-HMPREF2948_07610;Parent=gene-HMPREF2948_07610;Note=incomplete%3B too short partial abutting assembly gap%3B missing stop;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690296.1;locus_tag=HMPREF2948_07610;product=transcriptional regulator;pseudo=true;transl_table=11 KV814737.1 Genbank gene 733 1278 . - . ID=gene-HMPREF2948_07615;Name=HMPREF2948_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07615 KV814737.1 Protein Homology CDS 733 1278 . - 0 ID=cds-OFQ20301.1;Parent=gene-HMPREF2948_07615;Dbxref=NCBI_GP:OFQ20301.1;Name=OFQ20301.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005604820.1;locus_tag=HMPREF2948_07615;product=alkylhydroperoxidase;protein_id=OFQ20301.1;transl_table=11 KV814737.1 Genbank gene 1759 2235 . + . ID=gene-HMPREF2948_07620;Name=HMPREF2948_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07620 KV814737.1 Protein Homology CDS 1759 2235 . + 0 ID=cds-OFQ20302.1;Parent=gene-HMPREF2948_07620;Dbxref=NCBI_GP:OFQ20302.1;Name=OFQ20302.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695181.1;locus_tag=HMPREF2948_07620;product=hypothetical protein;protein_id=OFQ20302.1;transl_table=11 KV814737.1 Genbank gene 2284 5019 . + . ID=gene-HMPREF2948_07625;Name=HMPREF2948_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07625 KV814737.1 Protein Homology CDS 2284 5019 . + 0 ID=cds-OFQ20303.1;Parent=gene-HMPREF2948_07625;Dbxref=NCBI_GP:OFQ20303.1;Name=OFQ20303.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064276.1;locus_tag=HMPREF2948_07625;product=hypothetical protein;protein_id=OFQ20303.1;transl_table=11 KV814737.1 Genbank gene 5016 5222 . + . ID=gene-HMPREF2948_07630;Name=HMPREF2948_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07630 KV814737.1 Protein Homology CDS 5016 5222 . + 0 ID=cds-OFQ20304.1;Parent=gene-HMPREF2948_07630;Dbxref=NCBI_GP:OFQ20304.1;Name=OFQ20304.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005548515.1;locus_tag=HMPREF2948_07630;product=hypothetical protein;protein_id=OFQ20304.1;transl_table=11 KV814737.1 Genbank gene 5291 6742 . - . ID=gene-HMPREF2948_07635;Name=HMPREF2948_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07635 KV814737.1 Protein Homology CDS 5291 6742 . - 0 ID=cds-OFQ20305.1;Parent=gene-HMPREF2948_07635;Dbxref=NCBI_GP:OFQ20305.1;Name=OFQ20305.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015939976.1;locus_tag=HMPREF2948_07635;product=restriction endonuclease;protein_id=OFQ20305.1;transl_table=11 KV814737.1 Genbank gene 6732 7808 . - . ID=gene-HMPREF2948_07640;Name=HMPREF2948_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07640 KV814737.1 Protein Homology CDS 6732 7808 . - 0 ID=cds-OFQ20306.1;Parent=gene-HMPREF2948_07640;Dbxref=NCBI_GP:OFQ20306.1;Name=OFQ20306.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P25283.1;locus_tag=HMPREF2948_07640;product=modification methylase;protein_id=OFQ20306.1;transl_table=11 KV814737.1 Genbank gene 7798 8871 . - . ID=gene-HMPREF2948_07645;Name=HMPREF2948_07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07645 KV814737.1 Protein Homology CDS 7798 8871 . - 0 ID=cds-OFQ20307.1;Parent=gene-HMPREF2948_07645;Dbxref=NCBI_GP:OFQ20307.1;Name=OFQ20307.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P25282.2;locus_tag=HMPREF2948_07645;product=DNA cytosine methyltransferase;protein_id=OFQ20307.1;transl_table=11 KV814737.1 Genbank gene 9677 10462 . - . ID=gene-HMPREF2948_07650;Name=HMPREF2948_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07650 KV814737.1 Protein Homology CDS 9677 10462 . - 0 ID=cds-OFQ20308.1;Parent=gene-HMPREF2948_07650;Dbxref=NCBI_GP:OFQ20308.1;Name=OFQ20308.1;Note=seems to be involved in biofilm formation%3B in asymptomatic bacteriuria E. coli strains 83972 and VR50%2C the ygiD gene is upregulated during biofilm formation in urine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064272.1;locus_tag=HMPREF2948_07650;product=dioxygenase;protein_id=OFQ20308.1;transl_table=11 KV814737.1 Genbank gene 10766 11134 . + . ID=gene-HMPREF2948_07655;Name=HMPREF2948_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07655 KV814737.1 Protein Homology CDS 10766 11134 . + 0 ID=cds-OFQ20431.1;Parent=gene-HMPREF2948_07655;Dbxref=NCBI_GP:OFQ20431.1;Name=OFQ20431.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686323.1;locus_tag=HMPREF2948_07655;product=rhodanese-like domain-containing protein;protein_id=OFQ20431.1;transl_table=11 KV814737.1 Genbank gene 11321 11788 . - . ID=gene-HMPREF2948_07660;Name=HMPREF2948_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07660 KV814737.1 Protein Homology CDS 11321 11788 . - 0 ID=cds-OFQ20309.1;Parent=gene-HMPREF2948_07660;Dbxref=NCBI_GP:OFQ20309.1;Name=OFQ20309.1;Note=binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018651074.1;locus_tag=HMPREF2948_07660;product=single-stranded DNA-binding protein;protein_id=OFQ20309.1;transl_table=11 KV814737.1 Genbank gene 11951 14782 . + . ID=gene-HMPREF2948_07665;Name=HMPREF2948_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07665 KV814737.1 Protein Homology CDS 11951 14782 . + 0 ID=cds-OFQ20310.1;Parent=gene-HMPREF2948_07665;Dbxref=NCBI_GP:OFQ20310.1;Name=OFQ20310.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771957.1;locus_tag=HMPREF2948_07665;product=ABC-ATPase UvrA;protein_id=OFQ20310.1;transl_table=11 KV814737.1 Genbank gene 14839 16365 . - . ID=gene-HMPREF2948_07670;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=HMPREF2948_07670 KV814737.1 Protein Homology CDS 14839 16365 . - 0 ID=cds-OFQ20311.1;Parent=gene-HMPREF2948_07670;Dbxref=NCBI_GP:OFQ20311.1;Name=OFQ20311.1;Note=multidrug MFS transporte%3B with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid;gbkey=CDS;gene=emrB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006995558.1;locus_tag=HMPREF2948_07670;product=multidrug resistance protein B;protein_id=OFQ20311.1;transl_table=11 KV814737.1 Genbank gene 16374 17543 . - . ID=gene-HMPREF2948_07675;Name=HMPREF2948_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07675 KV814737.1 Protein Homology CDS 16374 17543 . - 0 ID=cds-OFQ20312.1;Parent=gene-HMPREF2948_07675;Dbxref=NCBI_GP:OFQ20312.1;Name=OFQ20312.1;Note=with ErmA and TolC forms a multidrug efflux system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693250.1;locus_tag=HMPREF2948_07675;product=multidrug transporter;protein_id=OFQ20312.1;transl_table=11 KV814737.1 Genbank gene 17678 18562 . - . ID=gene-HMPREF2948_07680;Name=HMPREF2948_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07680 KV814737.1 Protein Homology CDS 17678 18562 . - 0 ID=cds-OFQ20313.1;Parent=gene-HMPREF2948_07680;Dbxref=NCBI_GP:OFQ20313.1;Name=OFQ20313.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701460.1;locus_tag=HMPREF2948_07680;product=transporter;protein_id=OFQ20313.1;transl_table=11 KV814737.1 Genbank gene 18686 19144 . + . ID=gene-HMPREF2948_07685;Name=HMPREF2948_07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07685 KV814737.1 Protein Homology CDS 18686 19144 . + 0 ID=cds-OFQ20314.1;Parent=gene-HMPREF2948_07685;Dbxref=NCBI_GP:OFQ20314.1;Name=OFQ20314.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699521.1;locus_tag=HMPREF2948_07685;product=AsnC family transcriptional regulator;protein_id=OFQ20314.1;transl_table=11 KV814737.1 Genbank gene 19207 20391 . - . ID=gene-HMPREF2948_07690;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=HMPREF2948_07690 KV814737.1 Protein Homology CDS 19207 20391 . - 0 ID=cds-OFQ20315.1;Parent=gene-HMPREF2948_07690;Dbxref=NCBI_GP:OFQ20315.1;Name=OFQ20315.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064264.1;locus_tag=HMPREF2948_07690;product=Na+/H+ antiporter NhaA;protein_id=OFQ20315.1;transl_table=11 KV814737.1 Genbank gene 20594 21895 . + . ID=gene-HMPREF2948_07695;Name=HMPREF2948_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07695 KV814737.1 Protein Homology CDS 20594 21895 . + 0 ID=cds-OFQ20316.1;Parent=gene-HMPREF2948_07695;Dbxref=NCBI_GP:OFQ20316.1;Name=OFQ20316.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694065.1;locus_tag=HMPREF2948_07695;product=branched-chain amino acid transporter;protein_id=OFQ20316.1;transl_table=11 KV814737.1 Genbank gene 21961 22701 . - . ID=gene-HMPREF2948_07700;Name=HMPREF2948_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07700 KV814737.1 Protein Homology CDS 21961 22701 . - 0 ID=cds-OFQ20432.1;Parent=gene-HMPREF2948_07700;Dbxref=NCBI_GP:OFQ20432.1;Name=OFQ20432.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655733.1;locus_tag=HMPREF2948_07700;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=OFQ20432.1;transl_table=11 KV814737.1 Genbank gene 22784 25129 . - . ID=gene-HMPREF2948_07705;Name=HMPREF2948_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07705 KV814737.1 Protein Homology CDS 22784 25129 . - 0 ID=cds-OFQ20317.1;Parent=gene-HMPREF2948_07705;Dbxref=NCBI_GP:OFQ20317.1;Name=OFQ20317.1;Note=3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699516.1;locus_tag=HMPREF2948_07705;product=exoribonuclease R;protein_id=OFQ20317.1;transl_table=11 KV814737.1 Genbank gene 25290 25553 . - . ID=gene-HMPREF2948_07710;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=HMPREF2948_07710 KV814737.1 Protein Homology CDS 25290 25553 . - 0 ID=cds-OFQ20318.1;Parent=gene-HMPREF2948_07710;Dbxref=NCBI_GP:OFQ20318.1;Name=OFQ20318.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651580.1;locus_tag=HMPREF2948_07710;product=30S ribosomal protein S20;protein_id=OFQ20318.1;transl_table=11 KV814737.1 Genbank gene 25821 27395 . + . ID=gene-HMPREF2948_07715;Name=HMPREF2948_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07715 KV814737.1 Protein Homology CDS 25821 27395 . + 0 ID=cds-OFQ20319.1;Parent=gene-HMPREF2948_07715;Dbxref=NCBI_GP:OFQ20319.1;Name=OFQ20319.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686233.1;locus_tag=HMPREF2948_07715;product=multidrug transporter MurJ;protein_id=OFQ20319.1;transl_table=11 KV814737.1 Genbank gene 27446 28372 . + . ID=gene-HMPREF2948_07720;Name=HMPREF2948_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07720 KV814737.1 Protein Homology CDS 27446 28372 . + 0 ID=cds-OFQ20320.1;Parent=gene-HMPREF2948_07720;Dbxref=NCBI_GP:OFQ20320.1;Name=OFQ20320.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005630983.1;locus_tag=HMPREF2948_07720;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=OFQ20320.1;transl_table=11 KV814737.1 Genbank gene 28405 31230 . + . ID=gene-HMPREF2948_07725;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=HMPREF2948_07725 KV814737.1 Protein Homology CDS 28405 31230 . + 0 ID=cds-OFQ20321.1;Parent=gene-HMPREF2948_07725;Dbxref=NCBI_GP:OFQ20321.1;Name=OFQ20321.1;Note=IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase family type 1 subfamily%3B some organisms carry two different copies of this enzyme;gbkey=CDS;gene=ileS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500184.1;locus_tag=HMPREF2948_07725;product=isoleucine--tRNA ligase;protein_id=OFQ20321.1;transl_table=11 KV814737.1 Genbank gene 31343 32179 . - . ID=gene-HMPREF2948_07730;Name=HMPREF2948_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07730 KV814737.1 Protein Homology CDS 31343 32179 . - 0 ID=cds-OFQ20322.1;Parent=gene-HMPREF2948_07730;Dbxref=NCBI_GP:OFQ20322.1;Name=OFQ20322.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698162.1;locus_tag=HMPREF2948_07730;product=hypothetical protein;protein_id=OFQ20322.1;transl_table=11 KV814737.1 Genbank gene 32357 32797 . + . ID=gene-HMPREF2948_07735;Name=HMPREF2948_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07735 KV814737.1 Protein Homology CDS 32357 32797 . + 0 ID=cds-OFQ20323.1;Parent=gene-HMPREF2948_07735;Dbxref=NCBI_GP:OFQ20323.1;Name=OFQ20323.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823455.1;locus_tag=HMPREF2948_07735;product=peptidoglycan-binding protein LysM;protein_id=OFQ20323.1;transl_table=11 KV814737.1 Genbank gene 33011 34309 . + . ID=gene-HMPREF2948_07740;Name=HMPREF2948_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07740 KV814737.1 Protein Homology CDS 33011 34309 . + 0 ID=cds-OFQ20324.1;Parent=gene-HMPREF2948_07740;Dbxref=NCBI_GP:OFQ20324.1;Name=OFQ20324.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869039.1;locus_tag=HMPREF2948_07740;product=trigger factor;protein_id=OFQ20324.1;transl_table=11 KV814737.1 Genbank gene 34454 35035 . + . ID=gene-HMPREF2948_07745;Name=HMPREF2948_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07745 KV814737.1 Protein Homology CDS 34454 35035 . + 0 ID=cds-OFQ20325.1;Parent=gene-HMPREF2948_07745;Dbxref=NCBI_GP:OFQ20325.1;Name=OFQ20325.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0UW20.1;locus_tag=HMPREF2948_07745;product=ATP-dependent Clp protease proteolytic subunit;protein_id=OFQ20325.1;transl_table=11 KV814737.1 Genbank gene 35045 36283 . + . ID=gene-HMPREF2948_07750;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=HMPREF2948_07750 KV814737.1 Protein Homology CDS 35045 36283 . + 0 ID=cds-OFQ20326.1;Parent=gene-HMPREF2948_07750;Dbxref=NCBI_GP:OFQ20326.1;Name=OFQ20326.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636068.1;locus_tag=HMPREF2948_07750;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=OFQ20326.1;transl_table=11 KV814737.1 Genbank gene 36405 36821 . + . ID=gene-HMPREF2948_07755;Name=HMPREF2948_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07755 KV814737.1 Protein Homology CDS 36405 36821 . + 0 ID=cds-OFQ20327.1;Parent=gene-HMPREF2948_07755;Dbxref=NCBI_GP:OFQ20327.1;Name=OFQ20327.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005761393.1;locus_tag=HMPREF2948_07755;product=preprotein translocase subunit SecE;protein_id=OFQ20327.1;transl_table=11 KV814737.1 Genbank gene 36823 37380 . + . ID=gene-HMPREF2948_07760;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=HMPREF2948_07760 KV814737.1 Protein Homology CDS 36823 37380 . + 0 ID=cds-OFQ20328.1;Parent=gene-HMPREF2948_07760;Dbxref=NCBI_GP:OFQ20328.1;Name=OFQ20328.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695227.1;locus_tag=HMPREF2948_07760;product=transcription termination/antitermination protein NusG;protein_id=OFQ20328.1;transl_table=11 KV814737.1 Genbank gene 37552 37980 . + . ID=gene-HMPREF2948_07765;Name=HMPREF2948_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07765 KV814737.1 Protein Homology CDS 37552 37980 . + 0 ID=cds-OFQ20329.1;Parent=gene-HMPREF2948_07765;Dbxref=NCBI_GP:OFQ20329.1;Name=OFQ20329.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=HMPREF2948_07765;product=50S ribosomal protein L11;protein_id=OFQ20329.1;transl_table=11 KV814737.1 Genbank gene 37985 38674 . + . ID=gene-HMPREF2948_07770;Name=HMPREF2948_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07770 KV814737.1 Protein Homology CDS 37985 38674 . + 0 ID=cds-OFQ20330.1;Parent=gene-HMPREF2948_07770;Dbxref=NCBI_GP:OFQ20330.1;Name=OFQ20330.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649467.1;locus_tag=HMPREF2948_07770;product=50S ribosomal protein L1;protein_id=OFQ20330.1;transl_table=11 KV814737.1 Genbank gene 38829 39974 . - . ID=gene-HMPREF2948_07775;Name=HMPREF2948_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07775 KV814737.1 Protein Homology CDS 38829 39974 . - 0 ID=cds-OFQ20331.1;Parent=gene-HMPREF2948_07775;Dbxref=NCBI_GP:OFQ20331.1;Name=OFQ20331.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018137275.1;locus_tag=HMPREF2948_07775;product=butanol dehydrogenase;protein_id=OFQ20331.1;transl_table=11 KV814737.1 Genbank gene 40023 41207 . - . ID=gene-HMPREF2948_07780;Name=HMPREF2948_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07780 KV814737.1 Protein Homology CDS 40023 41207 . - 0 ID=cds-OFQ20332.1;Parent=gene-HMPREF2948_07780;Dbxref=NCBI_GP:OFQ20332.1;Name=OFQ20332.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004824012.1;locus_tag=HMPREF2948_07780;product=hypothetical protein;protein_id=OFQ20332.1;transl_table=11 KV814737.1 Genbank gene 41210 41788 . - . ID=gene-HMPREF2948_07785;Name=HMPREF2948_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07785 KV814737.1 Protein Homology CDS 41210 41788 . - 0 ID=cds-OFQ20433.1;Parent=gene-HMPREF2948_07785;Dbxref=NCBI_GP:OFQ20433.1;Name=OFQ20433.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655898.1;locus_tag=HMPREF2948_07785;product=hypothetical protein;protein_id=OFQ20433.1;transl_table=11 KV814737.1 Genbank gene 41796 42503 . - . ID=gene-HMPREF2948_07790;Name=HMPREF2948_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07790 KV814737.1 Protein Homology CDS 41796 42503 . - 0 ID=cds-OFQ20333.1;Parent=gene-HMPREF2948_07790;Dbxref=NCBI_GP:OFQ20333.1;Name=OFQ20333.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014668530.1;locus_tag=HMPREF2948_07790;product=HAD family hydrolase;protein_id=OFQ20333.1;transl_table=11 KV814737.1 Genbank gene 42512 42931 . - . ID=gene-HMPREF2948_07795;Name=HMPREF2948_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07795 KV814737.1 Protein Homology CDS 42512 42931 . - 0 ID=cds-OFQ20334.1;Parent=gene-HMPREF2948_07795;Dbxref=NCBI_GP:OFQ20334.1;Name=OFQ20334.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627705.1;locus_tag=HMPREF2948_07795;product=hypothetical protein;protein_id=OFQ20334.1;transl_table=11 KV814737.1 Genbank gene 43015 44325 . - . ID=gene-HMPREF2948_07800;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=HMPREF2948_07800 KV814737.1 Protein Homology CDS 43015 44325 . - 0 ID=cds-OFQ20335.1;Parent=gene-HMPREF2948_07800;Dbxref=NCBI_GP:OFQ20335.1;Name=OFQ20335.1;Note=catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65VZ7.1;locus_tag=HMPREF2948_07800;product=phosphopyruvate hydratase;protein_id=OFQ20335.1;transl_table=11 KV814737.1 Genbank gene 44613 46379 . + . ID=gene-HMPREF2948_07805;Name=HMPREF2948_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07805 KV814737.1 Protein Homology CDS 44613 46379 . + 0 ID=cds-OFQ20336.1;Parent=gene-HMPREF2948_07805;Dbxref=NCBI_GP:OFQ20336.1;Name=OFQ20336.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525066.1;locus_tag=HMPREF2948_07805;product=beta-carotene 15%2C15'-monooxygenase;protein_id=OFQ20336.1;transl_table=11 KV814737.1 Genbank gene 46464 48101 . - . ID=gene-HMPREF2948_07810;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=HMPREF2948_07810 KV814737.1 Protein Homology CDS 46464 48101 . - 0 ID=cds-OFQ20337.1;Parent=gene-HMPREF2948_07810;Dbxref=NCBI_GP:OFQ20337.1;Name=OFQ20337.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLL2.1;locus_tag=HMPREF2948_07810;product=CTP synthetase;protein_id=OFQ20337.1;transl_table=11 KV814737.1 Genbank gene 48360 49730 . + . ID=gene-HMPREF2948_07815;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=HMPREF2948_07815 KV814737.1 Protein Homology CDS 48360 49730 . + 0 ID=cds-OFQ20338.1;Parent=gene-HMPREF2948_07815;Dbxref=NCBI_GP:OFQ20338.1;Name=OFQ20338.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694502.1;locus_tag=HMPREF2948_07815;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=OFQ20338.1;transl_table=11 KV814737.1 Genbank gene 49847 50353 . + . ID=gene-HMPREF2948_07820;Name=HMPREF2948_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07820 KV814737.1 Protein Homology CDS 49847 50353 . + 0 ID=cds-OFQ20339.1;Parent=gene-HMPREF2948_07820;Dbxref=NCBI_GP:OFQ20339.1;Name=OFQ20339.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651632.1;locus_tag=HMPREF2948_07820;product=signal peptidase II;protein_id=OFQ20339.1;transl_table=11 KV814737.1 Genbank gene 50334 51278 . + . ID=gene-HMPREF2948_07825;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;locus_tag=HMPREF2948_07825 KV814737.1 Protein Homology CDS 50334 51278 . + 0 ID=cds-OFQ20340.1;Parent=gene-HMPREF2948_07825;Dbxref=NCBI_GP:OFQ20340.1;Name=OFQ20340.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QLQ5.1;locus_tag=HMPREF2948_07825;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=OFQ20340.1;transl_table=11 KV814737.1 Genbank gene 51327 51698 . - . ID=gene-HMPREF2948_07830;Name=HMPREF2948_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07830 KV814737.1 Protein Homology CDS 51327 51698 . - 0 ID=cds-OFQ20341.1;Parent=gene-HMPREF2948_07830;Dbxref=NCBI_GP:OFQ20341.1;Name=OFQ20341.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002643072.1;locus_tag=HMPREF2948_07830;product=DUF305 domain-containing protein;protein_id=OFQ20341.1;transl_table=11 KV814737.1 Genbank gene 51830 52429 . + . ID=gene-HMPREF2948_07835;Name=HMPREF2948_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07835 KV814737.1 Protein Homology CDS 51830 52429 . + 0 ID=cds-OFQ20342.1;Parent=gene-HMPREF2948_07835;Dbxref=NCBI_GP:OFQ20342.1;Name=OFQ20342.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005576051.1;locus_tag=HMPREF2948_07835;product=non-canonical purine NTP pyrophosphatase;protein_id=OFQ20342.1;transl_table=11 KV814737.1 Genbank gene 52468 52785 . + . ID=gene-HMPREF2948_07840;Name=HMPREF2948_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07840 KV814737.1 Protein Homology CDS 52468 52785 . + 0 ID=cds-OFQ20343.1;Parent=gene-HMPREF2948_07840;Dbxref=NCBI_GP:OFQ20343.1;Name=OFQ20343.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A3MZI3.1;locus_tag=HMPREF2948_07840;product=hypothetical protein;protein_id=OFQ20343.1;transl_table=11 KV814737.1 Genbank gene 52931 53293 . + . ID=gene-HMPREF2948_07845;Name=HMPREF2948_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07845 KV814737.1 Protein Homology CDS 52931 53293 . + 0 ID=cds-OFQ20344.1;Parent=gene-HMPREF2948_07845;Dbxref=NCBI_GP:OFQ20344.1;Name=OFQ20344.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669732.1;locus_tag=HMPREF2948_07845;product=competence protein ComE;protein_id=OFQ20344.1;transl_table=11 KV814737.1 Genbank gene 53506 54360 . + . ID=gene-HMPREF2948_07850;Name=HMPREF2948_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07850 KV814737.1 Protein Homology CDS 53506 54360 . + 0 ID=cds-OFQ20345.1;Parent=gene-HMPREF2948_07850;Dbxref=NCBI_GP:OFQ20345.1;Name=OFQ20345.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694105.1;locus_tag=HMPREF2948_07850;product=formate transporter FocA;protein_id=OFQ20345.1;transl_table=11 KV814737.1 Genbank gene 54416 56737 . + . ID=gene-HMPREF2948_07855;Name=HMPREF2948_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07855 KV814737.1 Protein Homology CDS 54416 56737 . + 0 ID=cds-OFQ20346.1;Parent=gene-HMPREF2948_07855;Dbxref=NCBI_GP:OFQ20346.1;Name=OFQ20346.1;Note=formate acetyltransferase%3B catalyzes the formation of formate and acetyl-CoA from pyruvate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695254.1;locus_tag=HMPREF2948_07855;product=formate acetyltransferase;protein_id=OFQ20346.1;transl_table=11 KV814737.1 Genbank gene 56818 57108 . + . ID=gene-HMPREF2948_07860;Name=HMPREF2948_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07860 KV814737.1 Protein Homology CDS 56818 57108 . + 0 ID=cds-OFQ20347.1;Parent=gene-HMPREF2948_07860;Dbxref=NCBI_GP:OFQ20347.1;Name=OFQ20347.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647085.1;locus_tag=HMPREF2948_07860;product=antibiotic biosynthesis monooxygenase;protein_id=OFQ20347.1;transl_table=11 KV814737.1 Genbank gene 57225 57965 . + . ID=gene-HMPREF2948_07865;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=HMPREF2948_07865 KV814737.1 Protein Homology CDS 57225 57965 . + 0 ID=cds-OFQ20348.1;Parent=gene-HMPREF2948_07865;Dbxref=NCBI_GP:OFQ20348.1;Name=OFQ20348.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635116.1;locus_tag=HMPREF2948_07865;product=pyruvate formate lyase-activating enzyme 1;protein_id=OFQ20348.1;transl_table=11 KV814737.1 Genbank gene 58020 58523 . + . ID=gene-HMPREF2948_07870;Name=HMPREF2948_07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07870 KV814737.1 Protein Homology CDS 58020 58523 . + 0 ID=cds-OFQ20349.1;Parent=gene-HMPREF2948_07870;Dbxref=NCBI_GP:OFQ20349.1;Name=OFQ20349.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697992.1;locus_tag=HMPREF2948_07870;product=hypothetical protein;protein_id=OFQ20349.1;transl_table=11 KV814737.1 Genbank gene 58645 59211 . - . ID=gene-HMPREF2948_07875;Name=HMPREF2948_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07875 KV814737.1 Protein Homology CDS 58645 59211 . - 0 ID=cds-OFQ20350.1;Parent=gene-HMPREF2948_07875;Dbxref=NCBI_GP:OFQ20350.1;Name=OFQ20350.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635150.1;locus_tag=HMPREF2948_07875;product=elongation factor P;protein_id=OFQ20350.1;transl_table=11 KV814737.1 Genbank gene 59248 60264 . + . ID=gene-HMPREF2948_07880;Name=HMPREF2948_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07880 KV814737.1 Protein Homology CDS 59248 60264 . + 0 ID=cds-OFQ20434.1;Parent=gene-HMPREF2948_07880;Dbxref=NCBI_GP:OFQ20434.1;Name=OFQ20434.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356247.1;locus_tag=HMPREF2948_07880;product=EF-P beta-lysylation protein EpmB;protein_id=OFQ20434.1;transl_table=11 KV814737.1 Genbank gene 60340 61728 . + . ID=gene-HMPREF2948_07885;Name=HMPREF2948_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07885 KV814737.1 Protein Homology CDS 60340 61728 . + 0 ID=cds-OFQ20351.1;Parent=gene-HMPREF2948_07885;Dbxref=NCBI_GP:OFQ20351.1;Name=OFQ20351.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698092.1;locus_tag=HMPREF2948_07885;product=acetylglucosamine transferase;protein_id=OFQ20351.1;transl_table=11 KV814737.1 Genbank gene 61834 62241 . + . ID=gene-HMPREF2948_07890;Name=HMPREF2948_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07890 KV814737.1 Protein Homology CDS 61834 62241 . + 0 ID=cds-OFQ20352.1;Parent=gene-HMPREF2948_07890;Dbxref=NCBI_GP:OFQ20352.1;Name=OFQ20352.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694341.1;locus_tag=HMPREF2948_07890;product=Opacity-associated protein OapB;protein_id=OFQ20352.1;transl_table=11 KV814737.1 Genbank gene 62249 62953 . + . ID=gene-HMPREF2948_07895;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=HMPREF2948_07895 KV814737.1 Protein Homology CDS 62249 62953 . + 0 ID=cds-OFQ20353.1;Parent=gene-HMPREF2948_07895;Dbxref=NCBI_GP:OFQ20353.1;Name=OFQ20353.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698006.1;locus_tag=HMPREF2948_07895;product=DNA repair protein RecO;protein_id=OFQ20353.1;transl_table=11 KV814737.1 Genbank gene 62990 64300 . + . ID=gene-HMPREF2948_07900;Name=HMPREF2948_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07900 KV814737.1 Protein Homology CDS 62990 64300 . + 0 ID=cds-OFQ20354.1;Parent=gene-HMPREF2948_07900;Dbxref=NCBI_GP:OFQ20354.1;Name=OFQ20354.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I127.1;locus_tag=HMPREF2948_07900;product=23S rRNA methyltransferase;protein_id=OFQ20354.1;transl_table=11 KV814737.1 Genbank gene 64463 66805 . + . ID=gene-HMPREF2948_07905;Name=HMPREF2948_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07905 KV814737.1 Protein Homology CDS 64463 66805 . + 0 ID=cds-OFQ20435.1;Parent=gene-HMPREF2948_07905;Dbxref=NCBI_GP:OFQ20435.1;Name=OFQ20435.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011992590.1;locus_tag=HMPREF2948_07905;product=restriction endonuclease subunit R;protein_id=OFQ20435.1;transl_table=11 KV814737.1 Genbank gene 66825 68294 . + . ID=gene-HMPREF2948_07910;Name=HMPREF2948_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07910 KV814737.1 Protein Homology CDS 66825 68294 . + 0 ID=cds-OFQ20355.1;Parent=gene-HMPREF2948_07910;Dbxref=NCBI_GP:OFQ20355.1;Name=OFQ20355.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005605245.1;locus_tag=HMPREF2948_07910;product=restriction endonuclease subunit M;protein_id=OFQ20355.1;transl_table=11 KV814737.1 Genbank gene 68314 69870 . + . ID=gene-HMPREF2948_07915;Name=HMPREF2948_07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07915 KV814737.1 Protein Homology CDS 68314 69870 . + 0 ID=cds-OFQ20356.1;Parent=gene-HMPREF2948_07915;Dbxref=NCBI_GP:OFQ20356.1;Name=OFQ20356.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012478544.1;locus_tag=HMPREF2948_07915;product=hypothetical protein;protein_id=OFQ20356.1;transl_table=11 KV814737.1 Genbank gene 70201 72450 . + . ID=gene-HMPREF2948_07920;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=HMPREF2948_07920 KV814737.1 Protein Homology CDS 70201 72450 . + 0 ID=cds-OFQ20357.1;Parent=gene-HMPREF2948_07920;Dbxref=NCBI_GP:OFQ20357.1;Name=OFQ20357.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647057.1;locus_tag=HMPREF2948_07920;product=(p)ppGpp synthetase;protein_id=OFQ20357.1;transl_table=11 KV814737.1 Genbank gene 72471 72827 . + . ID=gene-HMPREF2948_07925;Name=HMPREF2948_07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07925 KV814737.1 Protein Homology CDS 72471 72827 . + 0 ID=cds-OFQ20358.1;Parent=gene-HMPREF2948_07925;Dbxref=NCBI_GP:OFQ20358.1;Name=OFQ20358.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44424.1;locus_tag=HMPREF2948_07925;product=diacylglycerol kinase;protein_id=OFQ20358.1;transl_table=11 KV814737.1 Genbank gene 73063 73494 . + . ID=gene-HMPREF2948_07930;Name=HMPREF2948_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07930 KV814737.1 GeneMarkS+ CDS 73063 73494 . + 0 ID=cds-OFQ20359.1;Parent=gene-HMPREF2948_07930;Dbxref=NCBI_GP:OFQ20359.1;Name=OFQ20359.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07930;product=hypothetical protein;protein_id=OFQ20359.1;transl_table=11 KV814737.1 Genbank gene 73445 74338 . - . ID=gene-HMPREF2948_07935;Name=HMPREF2948_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07935 KV814737.1 Protein Homology CDS 73445 74338 . - 0 ID=cds-OFQ20360.1;Parent=gene-HMPREF2948_07935;Dbxref=NCBI_GP:OFQ20360.1;Name=OFQ20360.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44630.1;locus_tag=HMPREF2948_07935;product=site-specific tyrosine recombinase XerD;protein_id=OFQ20360.1;transl_table=11 KV814737.1 Genbank gene 74341 75501 . - . ID=gene-HMPREF2948_07940;Name=HMPREF2948_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07940 KV814737.1 Protein Homology CDS 74341 75501 . - 0 ID=cds-OFQ20361.1;Parent=gene-HMPREF2948_07940;Dbxref=NCBI_GP:OFQ20361.1;Name=OFQ20361.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699639.1;locus_tag=HMPREF2948_07940;product=MFS transporter;protein_id=OFQ20361.1;transl_table=11 KV814737.1 Genbank gene 75501 76316 . - . ID=gene-HMPREF2948_07945;Name=HMPREF2948_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07945 KV814737.1 Protein Homology CDS 75501 76316 . - 0 ID=cds-OFQ20362.1;Parent=gene-HMPREF2948_07945;Dbxref=NCBI_GP:OFQ20362.1;Name=OFQ20362.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341192.1;locus_tag=HMPREF2948_07945;product=pyrroline-5-carboxylate reductase;protein_id=OFQ20362.1;transl_table=11 KV814737.1 Genbank gene 76384 77295 . + . ID=gene-HMPREF2948_07950;Name=HMPREF2948_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07950 KV814737.1 Protein Homology CDS 76384 77295 . + 0 ID=cds-OFQ20363.1;Parent=gene-HMPREF2948_07950;Dbxref=NCBI_GP:OFQ20363.1;Name=OFQ20363.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698142.1;locus_tag=HMPREF2948_07950;product=recombination-associated protein RdgC;protein_id=OFQ20363.1;transl_table=11 KV814737.1 Genbank gene 77379 79229 . - . ID=gene-HMPREF2948_07955;Name=HMPREF2948_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07955 KV814737.1 Protein Homology CDS 77379 79229 . - 0 ID=cds-OFQ20364.1;Parent=gene-HMPREF2948_07955;Dbxref=NCBI_GP:OFQ20364.1;Name=OFQ20364.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648234.1;locus_tag=HMPREF2948_07955;product=GTP-binding protein TypA;protein_id=OFQ20364.1;transl_table=11 KV814737.1 Genbank gene 79478 80896 . + . ID=gene-HMPREF2948_07960;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=HMPREF2948_07960 KV814737.1 Protein Homology CDS 79478 80896 . + 0 ID=cds-OFQ20365.1;Parent=gene-HMPREF2948_07960;Dbxref=NCBI_GP:OFQ20365.1;Name=OFQ20365.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355373.1;locus_tag=HMPREF2948_07960;product=glutamine synthetase;protein_id=OFQ20365.1;transl_table=11 KV814737.1 Genbank gene 81487 82191 . + . ID=gene-HMPREF2948_07965;Name=HMPREF2948_07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07965 KV814737.1 Protein Homology CDS 81487 82191 . + 0 ID=cds-OFQ20436.1;Parent=gene-HMPREF2948_07965;Dbxref=NCBI_GP:OFQ20436.1;Name=OFQ20436.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693214.1;locus_tag=HMPREF2948_07965;product=hypothetical protein;protein_id=OFQ20436.1;transl_table=11 KV814737.1 Genbank gene 82188 82994 . + . ID=gene-HMPREF2948_07970;Name=HMPREF2948_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07970 KV814737.1 Protein Homology CDS 82188 82994 . + 0 ID=cds-OFQ20366.1;Parent=gene-HMPREF2948_07970;Dbxref=NCBI_GP:OFQ20366.1;Name=OFQ20366.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012072562.1;locus_tag=HMPREF2948_07970;product=exopolysaccharide biosynthesis protein;protein_id=OFQ20366.1;transl_table=11 KV814737.1 Genbank gene 83009 84079 . + . ID=gene-HMPREF2948_07975;Name=HMPREF2948_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07975 KV814737.1 GeneMarkS+ CDS 83009 84079 . + 0 ID=cds-OFQ20367.1;Parent=gene-HMPREF2948_07975;Dbxref=NCBI_GP:OFQ20367.1;Name=OFQ20367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07975;product=hypothetical protein;protein_id=OFQ20367.1;transl_table=11 KV814737.1 Genbank gene 84093 85418 . + . ID=gene-HMPREF2948_07980;Name=HMPREF2948_07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07980 KV814737.1 Protein Homology CDS 84093 85418 . + 0 ID=cds-OFQ20368.1;Parent=gene-HMPREF2948_07980;Dbxref=NCBI_GP:OFQ20368.1;Name=OFQ20368.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009015899.1;locus_tag=HMPREF2948_07980;product=glycerol-3-phosphate cytidylyltransferase;protein_id=OFQ20368.1;transl_table=11 KV814737.1 Genbank gene 85431 86306 . + . ID=gene-HMPREF2948_07985;Name=HMPREF2948_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07985 KV814737.1 GeneMarkS+ CDS 85431 86306 . + 0 ID=cds-OFQ20369.1;Parent=gene-HMPREF2948_07985;Dbxref=NCBI_GP:OFQ20369.1;Name=OFQ20369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07985;product=hypothetical protein;protein_id=OFQ20369.1;transl_table=11 KV814737.1 Genbank gene 86309 87514 . + . ID=gene-HMPREF2948_07990;Name=HMPREF2948_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07990 KV814737.1 GeneMarkS+ CDS 86309 87514 . + 0 ID=cds-OFQ20370.1;Parent=gene-HMPREF2948_07990;Dbxref=NCBI_GP:OFQ20370.1;Name=OFQ20370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07990;product=hypothetical protein;protein_id=OFQ20370.1;transl_table=11 KV814737.1 Genbank gene 87501 88661 . + . ID=gene-HMPREF2948_07995;Name=HMPREF2948_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_07995 KV814737.1 GeneMarkS+ CDS 87501 88661 . + 0 ID=cds-OFQ20371.1;Parent=gene-HMPREF2948_07995;Dbxref=NCBI_GP:OFQ20371.1;Name=OFQ20371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_07995;product=hypothetical protein;protein_id=OFQ20371.1;transl_table=11 KV814737.1 Genbank gene 88668 90119 . + . ID=gene-HMPREF2948_08000;Name=HMPREF2948_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08000 KV814737.1 Protein Homology CDS 88668 90119 . + 0 ID=cds-OFQ20372.1;Parent=gene-HMPREF2948_08000;Dbxref=NCBI_GP:OFQ20372.1;Name=OFQ20372.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013746908.1;locus_tag=HMPREF2948_08000;product=flippase;protein_id=OFQ20372.1;transl_table=11 KV814737.1 Genbank gene 90129 90857 . + . ID=gene-HMPREF2948_08005;Name=HMPREF2948_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08005 KV814737.1 Protein Homology CDS 90129 90857 . + 0 ID=cds-OFQ20373.1;Parent=gene-HMPREF2948_08005;Dbxref=NCBI_GP:OFQ20373.1;Name=OFQ20373.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014072757.1;locus_tag=HMPREF2948_08005;product=hypothetical protein;protein_id=OFQ20373.1;transl_table=11 KV814737.1 Genbank gene 90857 91903 . + . ID=gene-HMPREF2948_08010;Name=HMPREF2948_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08010 KV814737.1 GeneMarkS+ CDS 90857 91903 . + 0 ID=cds-OFQ20374.1;Parent=gene-HMPREF2948_08010;Dbxref=NCBI_GP:OFQ20374.1;Name=OFQ20374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_08010;product=hypothetical protein;protein_id=OFQ20374.1;transl_table=11 KV814737.1 Genbank gene 91908 93011 . + . ID=gene-HMPREF2948_08015;Name=HMPREF2948_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08015 KV814737.1 Protein Homology CDS 91908 93011 . + 0 ID=cds-OFQ20375.1;Parent=gene-HMPREF2948_08015;Dbxref=NCBI_GP:OFQ20375.1;Name=OFQ20375.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013746911.1;locus_tag=HMPREF2948_08015;product=UDP-galactopyranose mutase;protein_id=OFQ20375.1;transl_table=11 KV814737.1 Genbank gene 93024 94439 . + . ID=gene-HMPREF2948_08020;Name=HMPREF2948_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08020 KV814737.1 Protein Homology CDS 93024 94439 . + 0 ID=cds-OFQ20376.1;Parent=gene-HMPREF2948_08020;Dbxref=NCBI_GP:OFQ20376.1;Name=OFQ20376.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005617961.1;locus_tag=HMPREF2948_08020;product=UDP-phosphate galactose phosphotransferase;protein_id=OFQ20376.1;transl_table=11 KV814737.1 Genbank gene 94426 95553 . + . ID=gene-HMPREF2948_08025;Name=HMPREF2948_08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08025 KV814737.1 Protein Homology CDS 94426 95553 . + 0 ID=cds-OFQ20377.1;Parent=gene-HMPREF2948_08025;Dbxref=NCBI_GP:OFQ20377.1;Name=OFQ20377.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004159842.1;locus_tag=HMPREF2948_08025;product=acyltransferase;protein_id=OFQ20377.1;transl_table=11 KV814737.1 Genbank gene 95568 95747 . + . ID=gene-HMPREF2948_08030;Name=HMPREF2948_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08030 KV814737.1 GeneMarkS+ CDS 95568 95747 . + 0 ID=cds-OFQ20378.1;Parent=gene-HMPREF2948_08030;Dbxref=NCBI_GP:OFQ20378.1;Name=OFQ20378.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_08030;product=hypothetical protein;protein_id=OFQ20378.1;transl_table=11 KV814737.1 Genbank gene 95737 96618 . + . ID=gene-HMPREF2948_08035;Name=HMPREF2948_08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08035 KV814737.1 GeneMarkS+ CDS 95737 96618 . + 0 ID=cds-OFQ20379.1;Parent=gene-HMPREF2948_08035;Dbxref=NCBI_GP:OFQ20379.1;Name=OFQ20379.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_08035;product=hypothetical protein;protein_id=OFQ20379.1;transl_table=11 KV814737.1 Genbank gene 96618 97628 . + . ID=gene-HMPREF2948_08040;Name=HMPREF2948_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08040 KV814737.1 Protein Homology CDS 96618 97628 . + 0 ID=cds-OFQ20380.1;Parent=gene-HMPREF2948_08040;Dbxref=NCBI_GP:OFQ20380.1;Name=OFQ20380.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44914.1;locus_tag=HMPREF2948_08040;product=dTDP-glucose 4%2C6-dehydratase;protein_id=OFQ20380.1;transl_table=11 KV814737.1 Genbank gene 97647 98948 . + . ID=gene-HMPREF2948_08045;Name=HMPREF2948_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08045 KV814737.1 Protein Homology CDS 97647 98948 . + 0 ID=cds-OFQ20381.1;Parent=gene-HMPREF2948_08045;Dbxref=NCBI_GP:OFQ20381.1;Name=OFQ20381.1;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064196.1;locus_tag=HMPREF2948_08045;product=aminopeptidase PepB;protein_id=OFQ20381.1;transl_table=11 KV814737.1 Genbank gene 98959 99378 . + . ID=gene-HMPREF2948_08050;Name=HMPREF2948_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08050 KV814737.1 Protein Homology CDS 98959 99378 . + 0 ID=cds-OFQ20382.1;Parent=gene-HMPREF2948_08050;Dbxref=NCBI_GP:OFQ20382.1;Name=OFQ20382.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064195.1;locus_tag=HMPREF2948_08050;product=nucleoside-diphosphate kinase;protein_id=OFQ20382.1;transl_table=11 KV814737.1 Genbank gene 99427 100158 . - . ID=gene-HMPREF2948_08055;Name=HMPREF2948_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08055 KV814737.1 Protein Homology CDS 99427 100158 . - 0 ID=cds-OFQ20383.1;Parent=gene-HMPREF2948_08055;Dbxref=NCBI_GP:OFQ20383.1;Name=OFQ20383.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064194.1;locus_tag=HMPREF2948_08055;product=heme ABC transporter;protein_id=OFQ20383.1;transl_table=11 KV814737.1 Genbank gene 100151 101128 . - . ID=gene-HMPREF2948_08060;Name=HMPREF2948_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08060 KV814737.1 Protein Homology CDS 100151 101128 . - 0 ID=cds-OFQ20384.1;Parent=gene-HMPREF2948_08060;Dbxref=NCBI_GP:OFQ20384.1;Name=OFQ20384.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005695293.1;locus_tag=HMPREF2948_08060;product=branched-chain alpha-keto acid dehydrogenase subunit E2;protein_id=OFQ20384.1;transl_table=11 KV814737.1 Genbank gene 101235 102020 . - . ID=gene-HMPREF2948_08065;Name=HMPREF2948_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08065 KV814737.1 Protein Homology CDS 101235 102020 . - 0 ID=cds-OFQ20385.1;Parent=gene-HMPREF2948_08065;Dbxref=NCBI_GP:OFQ20385.1;Name=OFQ20385.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005820106.1;locus_tag=HMPREF2948_08065;product=helical backbone metal receptor;protein_id=OFQ20385.1;transl_table=11 KV814737.1 Genbank gene 102095 104029 . - . ID=gene-HMPREF2948_08070;Name=HMPREF2948_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08070 KV814737.1 Protein Homology CDS 102095 104029 . - 0 ID=cds-OFQ20386.1;Parent=gene-HMPREF2948_08070;Dbxref=NCBI_GP:OFQ20386.1;Name=OFQ20386.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005824588.1;locus_tag=HMPREF2948_08070;product=cobalamin receptor;protein_id=OFQ20386.1;transl_table=11 KV814737.1 Genbank gene 104230 105138 . + . ID=gene-HMPREF2948_08075;Name=HMPREF2948_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08075 KV814737.1 Protein Homology CDS 104230 105138 . + 0 ID=cds-OFQ20387.1;Parent=gene-HMPREF2948_08075;Dbxref=NCBI_GP:OFQ20387.1;Name=OFQ20387.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628151.1;locus_tag=HMPREF2948_08075;product=glycine--tRNA ligase subunit alpha;protein_id=OFQ20387.1;transl_table=11 KV814737.1 Genbank gene 105191 105841 . + . ID=gene-HMPREF2948_08080;Name=HMPREF2948_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08080 KV814737.1 Protein Homology CDS 105191 105841 . + 0 ID=cds-OFQ20388.1;Parent=gene-HMPREF2948_08080;Dbxref=NCBI_GP:OFQ20388.1;Name=OFQ20388.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523757.1;locus_tag=HMPREF2948_08080;product=hypothetical protein;protein_id=OFQ20388.1;transl_table=11 KV814737.1 Genbank gene 105841 106098 . + . ID=gene-HMPREF2948_08085;Name=HMPREF2948_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08085 KV814737.1 Protein Homology CDS 105841 106098 . + 0 ID=cds-OFQ20389.1;Parent=gene-HMPREF2948_08085;Dbxref=NCBI_GP:OFQ20389.1;Name=OFQ20389.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007523739.1;locus_tag=HMPREF2948_08085;product=hypothetical protein;protein_id=OFQ20389.1;transl_table=11 KV814737.1 Genbank gene 106236 106874 . + . ID=gene-HMPREF2948_08090;Name=HMPREF2948_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08090 KV814737.1 Protein Homology CDS 106236 106874 . + 0 ID=cds-OFQ20390.1;Parent=gene-HMPREF2948_08090;Dbxref=NCBI_GP:OFQ20390.1;Name=OFQ20390.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005709788.1;locus_tag=HMPREF2948_08090;product=hypothetical protein;protein_id=OFQ20390.1;transl_table=11 KV814737.1 Genbank gene 106884 108149 . + . ID=gene-HMPREF2948_08095;Name=HMPREF2948_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08095 KV814737.1 Protein Homology CDS 106884 108149 . + 0 ID=cds-OFQ20391.1;Parent=gene-HMPREF2948_08095;Dbxref=NCBI_GP:OFQ20391.1;Name=OFQ20391.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628146.1;locus_tag=HMPREF2948_08095;product=glucose-1-phosphatase;protein_id=OFQ20391.1;transl_table=11 KV814737.1 Genbank gene 108254 108952 . + . ID=gene-HMPREF2948_08100;Name=HMPREF2948_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08100 KV814737.1 Protein Homology CDS 108254 108952 . + 0 ID=cds-OFQ20392.1;Parent=gene-HMPREF2948_08100;Dbxref=NCBI_GP:OFQ20392.1;Name=OFQ20392.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005545076.1;locus_tag=HMPREF2948_08100;product=hypothetical protein;protein_id=OFQ20392.1;transl_table=11 KV814737.1 Genbank gene 109036 111102 . + . ID=gene-HMPREF2948_08105;Name=HMPREF2948_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08105 KV814737.1 Protein Homology CDS 109036 111102 . + 0 ID=cds-OFQ20393.1;Parent=gene-HMPREF2948_08105;Dbxref=NCBI_GP:OFQ20393.1;Name=OFQ20393.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43822.1;locus_tag=HMPREF2948_08105;product=glycine--tRNA ligase subunit beta;protein_id=OFQ20393.1;transl_table=11 KV814737.1 Genbank gene 111188 111264 . + . ID=gene-HMPREF2948_08110;Name=HMPREF2948_08110;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08110 KV814737.1 tRNAscan-SE tRNA 111188 111264 . + . ID=rna-HMPREF2948_08110;Parent=gene-HMPREF2948_08110;anticodon=(pos:111222..111224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08110;product=tRNA-Met KV814737.1 tRNAscan-SE exon 111188 111264 . + . ID=exon-HMPREF2948_08110-1;Parent=rna-HMPREF2948_08110;anticodon=(pos:111222..111224);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08110;product=tRNA-Met KV814737.1 Genbank gene 111317 112042 . - . ID=gene-HMPREF2948_08115;Name=HMPREF2948_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08115 KV814737.1 Protein Homology CDS 111317 112042 . - 0 ID=cds-OFQ20394.1;Parent=gene-HMPREF2948_08115;Dbxref=NCBI_GP:OFQ20394.1;Name=OFQ20394.1;Note=catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018357206.1;locus_tag=HMPREF2948_08115;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=OFQ20394.1;transl_table=11 KV814737.1 Genbank gene 112120 113175 . + . ID=gene-HMPREF2948_08120;Name=HMPREF2948_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08120 KV814737.1 Protein Homology CDS 112120 113175 . + 0 ID=cds-OFQ20395.1;Parent=gene-HMPREF2948_08120;Dbxref=NCBI_GP:OFQ20395.1;Name=OFQ20395.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698111.1;locus_tag=HMPREF2948_08120;product=glycosyl transferase;protein_id=OFQ20395.1;transl_table=11 KV814737.1 Genbank gene 113247 113591 . - . ID=gene-HMPREF2948_08125;Name=HMPREF2948_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08125 KV814737.1 Protein Homology CDS 113247 113591 . - 0 ID=cds-OFQ20396.1;Parent=gene-HMPREF2948_08125;Dbxref=NCBI_GP:OFQ20396.1;Name=OFQ20396.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698020.1;locus_tag=HMPREF2948_08125;product=hypothetical protein;protein_id=OFQ20396.1;transl_table=11 KV814737.1 Genbank gene 113695 114585 . + . ID=gene-HMPREF2948_08130;Name=HMPREF2948_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08130 KV814737.1 Protein Homology CDS 113695 114585 . + 0 ID=cds-OFQ20397.1;Parent=gene-HMPREF2948_08130;Dbxref=NCBI_GP:OFQ20397.1;Name=OFQ20397.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P45008.1;locus_tag=HMPREF2948_08130;product=AraC family transcriptional regulator;protein_id=OFQ20397.1;transl_table=11 KV814737.1 Genbank gene 114662 116506 . + . ID=gene-HMPREF2948_08135;Name=HMPREF2948_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08135 KV814737.1 Protein Homology CDS 114662 116506 . + 0 ID=cds-OFQ20398.1;Parent=gene-HMPREF2948_08135;Dbxref=NCBI_GP:OFQ20398.1;Name=OFQ20398.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699599.1;locus_tag=HMPREF2948_08135;product=multidrug ABC transporter ATP-binding protein;protein_id=OFQ20398.1;transl_table=11 KV814737.1 Genbank gene 116640 117164 . + . ID=gene-HMPREF2948_08140;Name=HMPREF2948_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08140 KV814737.1 Protein Homology CDS 116640 117164 . + 0 ID=cds-OFQ20399.1;Parent=gene-HMPREF2948_08140;Dbxref=NCBI_GP:OFQ20399.1;Name=OFQ20399.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005701315.1;locus_tag=HMPREF2948_08140;product=hypothetical protein;protein_id=OFQ20399.1;transl_table=11 KV814737.1 Genbank gene 117187 117357 . + . ID=gene-HMPREF2948_08145;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=HMPREF2948_08145 KV814737.1 Protein Homology CDS 117187 117357 . + 0 ID=cds-OFQ20400.1;Parent=gene-HMPREF2948_08145;Dbxref=NCBI_GP:OFQ20400.1;Name=OFQ20400.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014204674.1;locus_tag=HMPREF2948_08145;product=50S ribosomal protein L32;protein_id=OFQ20400.1;transl_table=11 KV814737.1 Genbank gene 117379 118398 . + . ID=gene-HMPREF2948_08150;Name=HMPREF2948_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08150 KV814737.1 Protein Homology CDS 117379 118398 . + 0 ID=cds-OFQ20401.1;Parent=gene-HMPREF2948_08150;Dbxref=NCBI_GP:OFQ20401.1;Name=OFQ20401.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P57976.2;locus_tag=HMPREF2948_08150;product=phosphate acyltransferase;protein_id=OFQ20401.1;transl_table=11 KV814737.1 Genbank gene 118417 119367 . + . ID=gene-HMPREF2948_08155;Name=HMPREF2948_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08155 KV814737.1 Protein Homology CDS 118417 119367 . + 0 ID=cds-OFQ20402.1;Parent=gene-HMPREF2948_08155;Dbxref=NCBI_GP:OFQ20402.1;Name=OFQ20402.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550567.1;locus_tag=HMPREF2948_08155;product=3-oxoacyl-ACP synthase;protein_id=OFQ20402.1;transl_table=11 KV814737.1 Genbank gene 119460 120398 . + . ID=gene-HMPREF2948_08160;Name=HMPREF2948_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08160 KV814737.1 Protein Homology CDS 119460 120398 . + 0 ID=cds-OFQ20403.1;Parent=gene-HMPREF2948_08160;Dbxref=NCBI_GP:OFQ20403.1;Name=OFQ20403.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005671155.1;locus_tag=HMPREF2948_08160;product=malonyl CoA-acyl carrier protein transacylase;protein_id=OFQ20403.1;transl_table=11 KV814737.1 Genbank gene 120412 121140 . + . ID=gene-HMPREF2948_08165;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=HMPREF2948_08165 KV814737.1 Protein Homology CDS 120412 121140 . + 0 ID=cds-OFQ20404.1;Parent=gene-HMPREF2948_08165;Dbxref=NCBI_GP:OFQ20404.1;Name=OFQ20404.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011201035.1;locus_tag=HMPREF2948_08165;product=beta-ketoacyl-ACP reductase;protein_id=OFQ20404.1;transl_table=11 KV814737.1 Genbank gene 121359 121589 . + . ID=gene-HMPREF2948_08170;Name=HMPREF2948_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08170 KV814737.1 Protein Homology CDS 121359 121589 . + 0 ID=cds-OFQ20405.1;Parent=gene-HMPREF2948_08170;Dbxref=NCBI_GP:OFQ20405.1;Name=OFQ20405.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005544465.1;locus_tag=HMPREF2948_08170;product=acyl carrier protein;protein_id=OFQ20405.1;transl_table=11 KV814737.1 Genbank gene 121872 123539 . + . ID=gene-HMPREF2948_08175;Name=HMPREF2948_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08175 KV814737.1 Protein Homology CDS 121872 123539 . + 0 ID=cds-OFQ20406.1;Parent=gene-HMPREF2948_08175;Dbxref=NCBI_GP:OFQ20406.1;Name=OFQ20406.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759940.1;locus_tag=HMPREF2948_08175;product=anaerobic C4-dicarboxylate transporter;protein_id=OFQ20406.1;transl_table=11 KV814737.1 Genbank gene 123847 124389 . + . ID=gene-HMPREF2948_08180;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=HMPREF2948_08180 KV814737.1 Protein Homology CDS 123847 124389 . + 0 ID=cds-OFQ20407.1;Parent=gene-HMPREF2948_08180;Dbxref=NCBI_GP:OFQ20407.1;Name=OFQ20407.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356294.1;locus_tag=HMPREF2948_08180;product=shikimate kinase;protein_id=OFQ20407.1;transl_table=11 KV814737.1 Genbank gene 124399 125487 . + . ID=gene-HMPREF2948_08185;Name=HMPREF2948_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08185 KV814737.1 Protein Homology CDS 124399 125487 . + 0 ID=cds-OFQ20408.1;Parent=gene-HMPREF2948_08185;Dbxref=NCBI_GP:OFQ20408.1;Name=OFQ20408.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694088.1;locus_tag=HMPREF2948_08185;product=3-dehydroquinate synthase;protein_id=OFQ20408.1;transl_table=11 KV814737.1 Genbank gene 125502 126356 . + . ID=gene-HMPREF2948_08190;Name=HMPREF2948_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08190 KV814737.1 Protein Homology CDS 125502 126356 . + 0 ID=cds-OFQ20409.1;Parent=gene-HMPREF2948_08190;Dbxref=NCBI_GP:OFQ20409.1;Name=OFQ20409.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699603.1;locus_tag=HMPREF2948_08190;product=DNA adenine methylase;protein_id=OFQ20409.1;transl_table=11 KV814737.1 Genbank gene 126358 126678 . - . ID=gene-HMPREF2948_08195;Name=HMPREF2948_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08195 KV814737.1 Protein Homology CDS 126358 126678 . - 0 ID=cds-OFQ20410.1;Parent=gene-HMPREF2948_08195;Dbxref=NCBI_GP:OFQ20410.1;Name=OFQ20410.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699602.1;locus_tag=HMPREF2948_08195;product=hypothetical protein;protein_id=OFQ20410.1;transl_table=11 KV814737.1 Genbank gene 126751 127068 . + . ID=gene-HMPREF2948_08200;Name=HMPREF2948_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08200 KV814737.1 Protein Homology CDS 126751 127068 . + 0 ID=cds-OFQ20411.1;Parent=gene-HMPREF2948_08200;Dbxref=NCBI_GP:OFQ20411.1;Name=OFQ20411.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064170.1;locus_tag=HMPREF2948_08200;product=hypothetical protein;protein_id=OFQ20411.1;transl_table=11 KV814737.1 Genbank gene 127142 129838 . + . ID=gene-HMPREF2948_08205;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=HMPREF2948_08205 KV814737.1 Protein Homology CDS 127142 129838 . + 0 ID=cds-OFQ20412.1;Parent=gene-HMPREF2948_08205;Dbxref=NCBI_GP:OFQ20412.1;Name=OFQ20412.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699606.1;locus_tag=HMPREF2948_08205;product=preprotein translocase subunit SecA;protein_id=OFQ20412.1;transl_table=11 KV814737.1 Genbank gene 129926 130330 . + . ID=gene-HMPREF2948_08210;Name=HMPREF2948_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08210 KV814737.1 Protein Homology CDS 129926 130330 . + 0 ID=cds-OFQ20413.1;Parent=gene-HMPREF2948_08210;Dbxref=NCBI_GP:OFQ20413.1;Name=OFQ20413.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648100.1;locus_tag=HMPREF2948_08210;product=8-oxo-dGTP diphosphatase;protein_id=OFQ20413.1;transl_table=11 KV814737.1 Genbank gene 130353 132017 . + . ID=gene-HMPREF2948_08215;Name=HMPREF2948_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08215 KV814737.1 Protein Homology CDS 130353 132017 . + 0 ID=cds-OFQ20414.1;Parent=gene-HMPREF2948_08215;Dbxref=NCBI_GP:OFQ20414.1;Name=OFQ20414.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_002237381.1;locus_tag=HMPREF2948_08215;product=hypothetical protein;protein_id=OFQ20414.1;transl_table=11 KV814737.1 Genbank gene 132048 133085 . - . ID=gene-HMPREF2948_08220;Name=HMPREF2948_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08220 KV814737.1 Protein Homology CDS 132048 133085 . - 0 ID=cds-OFQ20415.1;Parent=gene-HMPREF2948_08220;Dbxref=NCBI_GP:OFQ20415.1;Name=OFQ20415.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43747.1;locus_tag=HMPREF2948_08220;product=DNA polymerase III subunit delta;protein_id=OFQ20415.1;transl_table=11 KV814737.1 Genbank gene 133085 133588 . - . ID=gene-HMPREF2948_08225;Name=HMPREF2948_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08225 KV814737.1 Protein Homology CDS 133085 133588 . - 0 ID=cds-OFQ20416.1;Parent=gene-HMPREF2948_08225;Dbxref=NCBI_GP:OFQ20416.1;Name=OFQ20416.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57457.2;locus_tag=HMPREF2948_08225;product=hypothetical protein;protein_id=OFQ20416.1;transl_table=11 KV814737.1 Genbank gene 133676 136264 . - . ID=gene-HMPREF2948_08230;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=HMPREF2948_08230 KV814737.1 Protein Homology CDS 133676 136264 . - 0 ID=cds-OFQ20417.1;Parent=gene-HMPREF2948_08230;Dbxref=NCBI_GP:OFQ20417.1;Name=OFQ20417.1;Note=leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase;gbkey=CDS;gene=leuS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540005.1;locus_tag=HMPREF2948_08230;product=leucine--tRNA ligase;protein_id=OFQ20417.1;transl_table=11 KV814737.1 Genbank gene 136383 136670 . - . ID=gene-HMPREF2948_08235;Name=HMPREF2948_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08235 KV814737.1 Protein Homology CDS 136383 136670 . - 0 ID=cds-OFQ20418.1;Parent=gene-HMPREF2948_08235;Dbxref=NCBI_GP:OFQ20418.1;Name=OFQ20418.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627500.1;locus_tag=HMPREF2948_08235;product=YggU family protein;protein_id=OFQ20418.1;transl_table=11 KV814737.1 Genbank gene 136749 137294 . - . ID=gene-HMPREF2948_08240;Name=HMPREF2948_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08240 KV814737.1 Protein Homology CDS 136749 137294 . - 0 ID=cds-OFQ20419.1;Parent=gene-HMPREF2948_08240;Dbxref=NCBI_GP:OFQ20419.1;Name=OFQ20419.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698046.1;locus_tag=HMPREF2948_08240;product=hypothetical protein;protein_id=OFQ20419.1;transl_table=11 KV814737.1 Genbank gene 137294 138241 . - . ID=gene-HMPREF2948_08245;Name=HMPREF2948_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08245 KV814737.1 Protein Homology CDS 137294 138241 . - 0 ID=cds-OFQ20420.1;Parent=gene-HMPREF2948_08245;Dbxref=NCBI_GP:OFQ20420.1;Name=OFQ20420.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651675.1;locus_tag=HMPREF2948_08245;product=magnesium transporter CorA;protein_id=OFQ20420.1;transl_table=11 KV814737.1 Genbank gene 138554 139153 . - . ID=gene-HMPREF2948_08250;Name=HMPREF2948_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08250 KV814737.1 Protein Homology CDS 138554 139153 . - 0 ID=cds-OFQ20421.1;Parent=gene-HMPREF2948_08250;Dbxref=NCBI_GP:OFQ20421.1;Name=OFQ20421.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43782.1;locus_tag=HMPREF2948_08250;product=hypothetical protein;protein_id=OFQ20421.1;transl_table=11 KV814737.1 Genbank gene 139238 139549 . + . ID=gene-HMPREF2948_08255;Name=HMPREF2948_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08255 KV814737.1 Protein Homology CDS 139238 139549 . + 0 ID=cds-OFQ20422.1;Parent=gene-HMPREF2948_08255;Dbxref=NCBI_GP:OFQ20422.1;Name=OFQ20422.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005542935.1;locus_tag=HMPREF2948_08255;product=transcriptional regulator;protein_id=OFQ20422.1;transl_table=11 KV814737.1 Genbank gene 139947 141290 . + . ID=gene-HMPREF2948_08260;Name=HMPREF2948_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08260 KV814737.1 Protein Homology CDS 139947 141290 . + 0 ID=cds-OFQ20423.1;Parent=gene-HMPREF2948_08260;Dbxref=NCBI_GP:OFQ20423.1;Name=OFQ20423.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018356309.1;locus_tag=HMPREF2948_08260;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit A;protein_id=OFQ20423.1;transl_table=11 KV814737.1 Genbank gene 141293 142528 . + . ID=gene-HMPREF2948_08265;Name=HMPREF2948_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08265 KV814737.1 Protein Homology CDS 141293 142528 . + 0 ID=cds-OFQ20424.1;Parent=gene-HMPREF2948_08265;Dbxref=NCBI_GP:OFQ20424.1;Name=OFQ20424.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05011.1;locus_tag=HMPREF2948_08265;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=OFQ20424.1;transl_table=11 KV814737.1 Genbank gene 142521 143312 . + . ID=gene-HMPREF2948_08270;Name=HMPREF2948_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08270 KV814737.1 Protein Homology CDS 142521 143312 . + 0 ID=cds-OFQ20425.1;Parent=gene-HMPREF2948_08270;Dbxref=NCBI_GP:OFQ20425.1;Name=OFQ20425.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525286.1;locus_tag=HMPREF2948_08270;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit C;protein_id=OFQ20425.1;transl_table=11 KV814737.1 Genbank gene 143312 143941 . + . ID=gene-HMPREF2948_08275;Name=HMPREF2948_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08275 KV814737.1 Protein Homology CDS 143312 143941 . + 0 ID=cds-OFQ20426.1;Parent=gene-HMPREF2948_08275;Dbxref=NCBI_GP:OFQ20426.1;Name=OFQ20426.1;Note=Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010786252.1;locus_tag=HMPREF2948_08275;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=OFQ20426.1;transl_table=11 KV814737.1 Genbank gene 143945 144541 . + . ID=gene-HMPREF2948_08280;Name=HMPREF2948_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08280 KV814737.1 Protein Homology CDS 143945 144541 . + 0 ID=cds-OFQ20427.1;Parent=gene-HMPREF2948_08280;Dbxref=NCBI_GP:OFQ20427.1;Name=OFQ20427.1;Note=Part of the NQR complex which consists of NqrA%2C NqrB%2C NqrC%2C NqrD%2C NqrE and NqrF%3B NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions%2C coupled with the transport of Na(+) ions from the cytoplasm to the periplasm%3B NqrE is probably involved in the second step%2C the conversion of ubisemiquinone to ubiquinol.;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005763552.1;locus_tag=HMPREF2948_08280;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=OFQ20427.1;transl_table=11 KV814737.1 Genbank gene 144552 145787 . + . ID=gene-HMPREF2948_08285;Name=HMPREF2948_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08285 KV814737.1 Protein Homology CDS 144552 145787 . + 0 ID=cds-OFQ20428.1;Parent=gene-HMPREF2948_08285;Dbxref=NCBI_GP:OFQ20428.1;Name=OFQ20428.1;Note=uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:O05012.1;locus_tag=HMPREF2948_08285;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=OFQ20428.1;transl_table=11 KV814737.1 Genbank gene 145932 146972 . + . ID=gene-HMPREF2948_08290;Name=HMPREF2948_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08290 KV814737.1 Protein Homology CDS 145932 146972 . + 0 ID=cds-OFQ20429.1;Parent=gene-HMPREF2948_08290;Dbxref=NCBI_GP:OFQ20429.1;Name=OFQ20429.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668096.1;locus_tag=HMPREF2948_08290;product=thiamine biosynthesis protein ApbE;protein_id=OFQ20429.1;transl_table=11 KV814737.1 Genbank gene 146975 147235 . + . ID=gene-HMPREF2948_08295;Name=HMPREF2948_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08295 KV814737.1 Protein Homology CDS 146975 147235 . + 0 ID=cds-OFQ20430.1;Parent=gene-HMPREF2948_08295;Dbxref=NCBI_GP:OFQ20430.1;Name=OFQ20430.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005660836.1;locus_tag=HMPREF2948_08295;product=hypothetical protein;protein_id=OFQ20430.1;transl_table=11 KV814737.1 Genbank gene 147294 148490 . + . ID=gene-HMPREF2948_08300;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=HMPREF2948_08300 KV814737.1 Protein Homology CDS 147294 148490 . + 0 ID=cds-OFQ20437.1;Parent=gene-HMPREF2948_08300;Dbxref=NCBI_GP:OFQ20437.1;Name=OFQ20437.1;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011271909.1;locus_tag=HMPREF2948_08300;product=tRNA(5-methylaminomethyl-2-thiouridine)-methyltransferase;protein_id=OFQ20437.1;transl_table=11 ##sequence-region KV814738.1 1 3033 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814738.1 Genbank region 1 3033 . + . ID=KV814738.1:1..3033;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814738.1 Genbank gene 42 118 . - . ID=gene-HMPREF2948_08305;Name=HMPREF2948_08305;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08305 KV814738.1 tRNAscan-SE tRNA 42 118 . - . ID=rna-HMPREF2948_08305;Parent=gene-HMPREF2948_08305;anticodon=(pos:complement(82..84));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08305;product=tRNA-Pro KV814738.1 tRNAscan-SE exon 42 118 . - . ID=exon-HMPREF2948_08305-1;Parent=rna-HMPREF2948_08305;anticodon=(pos:complement(82..84));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08305;product=tRNA-Pro KV814738.1 Genbank gene 143 218 . - . ID=gene-HMPREF2948_08310;Name=HMPREF2948_08310;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08310 KV814738.1 tRNAscan-SE tRNA 143 218 . - . ID=rna-HMPREF2948_08310;Parent=gene-HMPREF2948_08310;anticodon=(pos:complement(183..185));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08310;product=tRNA-His KV814738.1 tRNAscan-SE exon 143 218 . - . ID=exon-HMPREF2948_08310-1;Parent=rna-HMPREF2948_08310;anticodon=(pos:complement(183..185));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08310;product=tRNA-His KV814738.1 Genbank gene 249 325 . - . ID=gene-HMPREF2948_08315;Name=HMPREF2948_08315;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08315 KV814738.1 tRNAscan-SE tRNA 249 325 . - . ID=rna-HMPREF2948_08315;Parent=gene-HMPREF2948_08315;anticodon=(pos:complement(289..291));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08315;product=tRNA-Arg KV814738.1 tRNAscan-SE exon 249 325 . - . ID=exon-HMPREF2948_08315-1;Parent=rna-HMPREF2948_08315;anticodon=(pos:complement(289..291));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08315;product=tRNA-Arg KV814738.1 Genbank gene 508 1572 . - . ID=gene-HMPREF2948_08320;Name=HMPREF2948_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08320 KV814738.1 Protein Homology CDS 508 1572 . - 0 ID=cds-OFQ20294.1;Parent=gene-HMPREF2948_08320;Dbxref=NCBI_GP:OFQ20294.1;Name=OFQ20294.1;Note=catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688044.1;locus_tag=HMPREF2948_08320;product=undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase;protein_id=OFQ20294.1;transl_table=11 KV814738.1 Genbank gene 1694 2977 . + . ID=gene-HMPREF2948_08325;Name=HMPREF2948_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08325 KV814738.1 Protein Homology CDS 1694 2977 . + 0 ID=cds-OFQ20295.1;Parent=gene-HMPREF2948_08325;Dbxref=NCBI_GP:OFQ20295.1;Name=OFQ20295.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005554359.1;locus_tag=HMPREF2948_08325;product=glutamate-1-semialdehyde aminotransferase;protein_id=OFQ20295.1;transl_table=11 ##sequence-region KV814739.1 1 2777 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814739.1 Genbank region 1 2777 . + . ID=KV814739.1:1..2777;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814739.1 Genbank pseudogene 1 200 . + . ID=gene-HMPREF2948_08330;Name=HMPREF2948_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_08330;pseudo=true KV814739.1 GeneMarkS+ CDS 1 200 . + 2 ID=cds-HMPREF2948_08330;Parent=gene-HMPREF2948_08330;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_08330;product=hypothetical protein;pseudo=true;transl_table=11 KV814739.1 Genbank gene 303 482 . - . ID=gene-HMPREF2948_08335;Name=HMPREF2948_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08335 KV814739.1 Protein Homology CDS 303 482 . - 0 ID=cds-OFQ20180.1;Parent=gene-HMPREF2948_08335;Dbxref=NCBI_GP:OFQ20180.1;Name=OFQ20180.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003676228.1;locus_tag=HMPREF2948_08335;product=DNA topoisomerase;protein_id=OFQ20180.1;transl_table=11 KV814739.1 Genbank gene 481 690 . + . ID=gene-HMPREF2948_08340;Name=HMPREF2948_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08340 KV814739.1 Protein Homology CDS 481 690 . + 0 ID=cds-OFQ20181.1;Parent=gene-HMPREF2948_08340;Dbxref=NCBI_GP:OFQ20181.1;Name=OFQ20181.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004519024.1;locus_tag=HMPREF2948_08340;product=hypothetical protein;protein_id=OFQ20181.1;transl_table=11 KV814739.1 Genbank gene 735 2192 . - . ID=gene-HMPREF2948_08345;Name=HMPREF2948_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08345 KV814739.1 Protein Homology CDS 735 2192 . - 0 ID=cds-OFQ20182.1;Parent=gene-HMPREF2948_08345;Dbxref=NCBI_GP:OFQ20182.1;Name=OFQ20182.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003748070.1;locus_tag=HMPREF2948_08345;product=hypothetical protein;protein_id=OFQ20182.1;transl_table=11 ##sequence-region KV814740.1 1 307 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814740.1 Genbank region 1 307 . + . ID=KV814740.1:1..307;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814740.1 Genbank gene 1 307 . - . ID=gene-HMPREF2948_08350;Name=HMPREF2948_08350;end_range=307,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_08350;partial=true;start_range=.,1 KV814740.1 Genbank rRNA 1 307 . - . ID=rna-HMPREF2948_08350;Parent=gene-HMPREF2948_08350;end_range=307,.;gbkey=rRNA;locus_tag=HMPREF2948_08350;partial=true;product=23S ribosomal RNA;start_range=.,1 KV814740.1 Genbank exon 1 307 . - . ID=exon-HMPREF2948_08350-1;Parent=rna-HMPREF2948_08350;end_range=307,.;gbkey=rRNA;locus_tag=HMPREF2948_08350;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region KV814741.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814741.1 Genbank region 1 768 . + . ID=KV814741.1:1..768;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814741.1 Genbank gene 1 768 . + . ID=gene-HMPREF2948_08355;Name=HMPREF2948_08355;end_range=768,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_08355;partial=true;start_range=.,1 KV814741.1 Genbank rRNA 1 768 . + . ID=rna-HMPREF2948_08355;Parent=gene-HMPREF2948_08355;end_range=768,.;gbkey=rRNA;locus_tag=HMPREF2948_08355;partial=true;product=23S ribosomal RNA;start_range=.,1 KV814741.1 Genbank exon 1 768 . + . ID=exon-HMPREF2948_08355-1;Parent=rna-HMPREF2948_08355;end_range=768,.;gbkey=rRNA;locus_tag=HMPREF2948_08355;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region KV814742.1 1 410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814742.1 Genbank region 1 410 . + . ID=KV814742.1:1..410;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814742.1 Genbank gene 1 410 . - . ID=gene-HMPREF2948_08360;Name=HMPREF2948_08360;end_range=410,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=HMPREF2948_08360;partial=true;start_range=.,1 KV814742.1 Genbank rRNA 1 410 . - . ID=rna-HMPREF2948_08360;Parent=gene-HMPREF2948_08360;end_range=410,.;gbkey=rRNA;locus_tag=HMPREF2948_08360;partial=true;product=23S ribosomal RNA;start_range=.,1 KV814742.1 Genbank exon 1 410 . - . ID=exon-HMPREF2948_08360-1;Parent=rna-HMPREF2948_08360;end_range=410,.;gbkey=rRNA;locus_tag=HMPREF2948_08360;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region KV814743.1 1 305508 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1739452 KV814743.1 Genbank region 1 305508 . + . ID=KV814743.1:1..305508;Dbxref=HMP:2948,taxon:1739452;gbkey=Src;genome=genomic;isolation-source=tracheal aspirate;mol_type=genomic DNA;nat-host=Homo sapiens;strain=HMSC073C03 KV814743.1 Genbank gene 137 694 . + . ID=gene-HMPREF2948_08365;Name=HMPREF2948_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08365 KV814743.1 Protein Homology CDS 137 694 . + 0 ID=cds-OFQ20012.1;Parent=gene-HMPREF2948_08365;Dbxref=NCBI_GP:OFQ20012.1;Name=OFQ20012.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693127.1;locus_tag=HMPREF2948_08365;product=GTPase-activating protein;protein_id=OFQ20012.1;transl_table=11 KV814743.1 Genbank gene 700 1143 . + . ID=gene-HMPREF2948_08370;Name=HMPREF2948_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08370 KV814743.1 Protein Homology CDS 700 1143 . + 0 ID=cds-OFQ20013.1;Parent=gene-HMPREF2948_08370;Dbxref=NCBI_GP:OFQ20013.1;Name=OFQ20013.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697333.1;locus_tag=HMPREF2948_08370;product=hypothetical protein;protein_id=OFQ20013.1;transl_table=11 KV814743.1 Genbank gene 1147 2514 . + . ID=gene-HMPREF2948_08375;Name=HMPREF2948_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08375 KV814743.1 Protein Homology CDS 1147 2514 . + 0 ID=cds-OFQ20014.1;Parent=gene-HMPREF2948_08375;Dbxref=NCBI_GP:OFQ20014.1;Name=OFQ20014.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012341592.1;locus_tag=HMPREF2948_08375;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=OFQ20014.1;transl_table=11 KV814743.1 Genbank gene 2564 3817 . - . ID=gene-HMPREF2948_08380;Name=HMPREF2948_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08380 KV814743.1 Protein Homology CDS 2564 3817 . - 0 ID=cds-OFQ20015.1;Parent=gene-HMPREF2948_08380;Dbxref=NCBI_GP:OFQ20015.1;Name=OFQ20015.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696981.1;locus_tag=HMPREF2948_08380;product=diaminopimelate decarboxylase;protein_id=OFQ20015.1;transl_table=11 KV814743.1 Genbank gene 4066 4371 . + . ID=gene-HMPREF2948_08385;Name=HMPREF2948_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08385 KV814743.1 Protein Homology CDS 4066 4371 . + 0 ID=cds-OFQ20016.1;Parent=gene-HMPREF2948_08385;Dbxref=NCBI_GP:OFQ20016.1;Name=OFQ20016.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626020.1;locus_tag=HMPREF2948_08385;product=iron donor protein CyaY;protein_id=OFQ20016.1;transl_table=11 KV814743.1 Genbank gene 4371 6236 . + . ID=gene-HMPREF2948_08390;Name=HMPREF2948_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08390 KV814743.1 Protein Homology CDS 4371 6236 . + 0 ID=cds-OFQ20017.1;Parent=gene-HMPREF2948_08390;Dbxref=NCBI_GP:OFQ20017.1;Name=OFQ20017.1;Note=functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064686.1;locus_tag=HMPREF2948_08390;product=ATP-dependent DNA helicase RecQ;protein_id=OFQ20017.1;transl_table=11 KV814743.1 Genbank gene 6279 7820 . - . ID=gene-HMPREF2948_08395;Name=HMPREF2948_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08395 KV814743.1 Protein Homology CDS 6279 7820 . - 0 ID=cds-OFQ20018.1;Parent=gene-HMPREF2948_08395;Dbxref=NCBI_GP:OFQ20018.1;Name=OFQ20018.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991253.1;locus_tag=HMPREF2948_08395;product=hypothetical protein;protein_id=OFQ20018.1;transl_table=11 KV814743.1 Genbank gene 8011 8676 . + . ID=gene-HMPREF2948_08400;Name=HMPREF2948_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08400 KV814743.1 Protein Homology CDS 8011 8676 . + 0 ID=cds-OFQ20019.1;Parent=gene-HMPREF2948_08400;Dbxref=NCBI_GP:OFQ20019.1;Name=OFQ20019.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696975.1;locus_tag=HMPREF2948_08400;product=hypothetical protein;protein_id=OFQ20019.1;transl_table=11 KV814743.1 Genbank gene 8626 9657 . - . ID=gene-HMPREF2948_08405;Name=HMPREF2948_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08405 KV814743.1 Protein Homology CDS 8626 9657 . - 0 ID=cds-OFQ20020.1;Parent=gene-HMPREF2948_08405;Dbxref=NCBI_GP:OFQ20020.1;Name=OFQ20020.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005692075.1;locus_tag=HMPREF2948_08405;product=hypothetical protein;protein_id=OFQ20020.1;transl_table=11 KV814743.1 Genbank gene 9654 10898 . - . ID=gene-HMPREF2948_08410;Name=HMPREF2948_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08410 KV814743.1 Protein Homology CDS 9654 10898 . - 0 ID=cds-OFQ20021.1;Parent=gene-HMPREF2948_08410;Dbxref=NCBI_GP:OFQ20021.1;Name=OFQ20021.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697308.1;locus_tag=HMPREF2948_08410;product=RfaL protein;protein_id=OFQ20021.1;transl_table=11 KV814743.1 Genbank gene 10983 12062 . - . ID=gene-HMPREF2948_08415;Name=HMPREF2948_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08415 KV814743.1 Protein Homology CDS 10983 12062 . - 0 ID=cds-OFQ20022.1;Parent=gene-HMPREF2948_08415;Dbxref=NCBI_GP:OFQ20022.1;Name=OFQ20022.1;Note=catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694127.1;locus_tag=HMPREF2948_08415;product=class II fructose-bisphosphate aldolase;protein_id=OFQ20022.1;transl_table=11 KV814743.1 Genbank gene 12143 13303 . - . ID=gene-HMPREF2948_08420;Name=HMPREF2948_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08420 KV814743.1 Protein Homology CDS 12143 13303 . - 0 ID=cds-OFQ20023.1;Parent=gene-HMPREF2948_08420;Dbxref=NCBI_GP:OFQ20023.1;Name=OFQ20023.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VLR3.1;locus_tag=HMPREF2948_08420;product=phosphoglycerate kinase;protein_id=OFQ20023.1;transl_table=11 KV814743.1 Genbank gene 13402 14115 . - . ID=gene-HMPREF2948_08425;Name=HMPREF2948_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08425 KV814743.1 Protein Homology CDS 13402 14115 . - 0 ID=cds-OFQ20024.1;Parent=gene-HMPREF2948_08425;Dbxref=NCBI_GP:OFQ20024.1;Name=OFQ20024.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064692.1;locus_tag=HMPREF2948_08425;product=ribonuclease;protein_id=OFQ20024.1;transl_table=11 KV814743.1 Genbank gene 14191 14451 . + . ID=gene-HMPREF2948_08430;Name=HMPREF2948_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08430 KV814743.1 Protein Homology CDS 14191 14451 . + 0 ID=cds-OFQ20025.1;Parent=gene-HMPREF2948_08430;Dbxref=NCBI_GP:OFQ20025.1;Name=OFQ20025.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702142.1;locus_tag=HMPREF2948_08430;product=ferredoxin;protein_id=OFQ20025.1;transl_table=11 KV814743.1 Genbank gene 14781 15995 . + . ID=gene-HMPREF2948_08435;Name=HMPREF2948_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08435 KV814743.1 Protein Homology CDS 14781 15995 . + 0 ID=cds-OFQ20026.1;Parent=gene-HMPREF2948_08435;Dbxref=NCBI_GP:OFQ20026.1;Name=OFQ20026.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697322.1;locus_tag=HMPREF2948_08435;product=MFS transporter;protein_id=OFQ20026.1;transl_table=11 KV814743.1 Genbank gene 16130 17833 . + . ID=gene-HMPREF2948_08440;Name=HMPREF2948_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08440 KV814743.1 Protein Homology CDS 16130 17833 . + 0 ID=cds-OFQ20027.1;Parent=gene-HMPREF2948_08440;Dbxref=NCBI_GP:OFQ20027.1;Name=OFQ20027.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013527503.1;locus_tag=HMPREF2948_08440;product=two-component system sensor histidine kinase NarQ;protein_id=OFQ20027.1;transl_table=11 KV814743.1 Genbank gene 17843 18868 . + . ID=gene-HMPREF2948_08445;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=HMPREF2948_08445 KV814743.1 Protein Homology CDS 17843 18868 . + 0 ID=cds-OFQ20028.1;Parent=gene-HMPREF2948_08445;Dbxref=NCBI_GP:OFQ20028.1;Name=OFQ20028.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005541968.1;locus_tag=HMPREF2948_08445;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=OFQ20028.1;transl_table=11 KV814743.1 Genbank gene 18888 19199 . + . ID=gene-HMPREF2948_08450;Name=HMPREF2948_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08450 KV814743.1 Protein Homology CDS 18888 19199 . + 0 ID=cds-OFQ20029.1;Parent=gene-HMPREF2948_08450;Dbxref=NCBI_GP:OFQ20029.1;Name=OFQ20029.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005752138.1;locus_tag=HMPREF2948_08450;product=hypothetical protein;protein_id=OFQ20029.1;transl_table=11 KV814743.1 Genbank gene 19348 20190 . + . ID=gene-HMPREF2948_08455;Name=HMPREF2948_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08455 KV814743.1 Protein Homology CDS 19348 20190 . + 0 ID=cds-OFQ20030.1;Parent=gene-HMPREF2948_08455;Dbxref=NCBI_GP:OFQ20030.1;Name=OFQ20030.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626842.1;locus_tag=HMPREF2948_08455;product=RNA polymerase factor sigma-32;protein_id=OFQ20030.1;transl_table=11 KV814743.1 Genbank gene 20240 20839 . - . ID=gene-HMPREF2948_08460;Name=HMPREF2948_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08460 KV814743.1 Protein Homology CDS 20240 20839 . - 0 ID=cds-OFQ20031.1;Parent=gene-HMPREF2948_08460;Dbxref=NCBI_GP:OFQ20031.1;Name=OFQ20031.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CKC7.1;locus_tag=HMPREF2948_08460;product=glycerol-3-phosphate acyltransferase;protein_id=OFQ20031.1;transl_table=11 KV814743.1 Genbank gene 20937 21293 . + . ID=gene-HMPREF2948_08465;Name=HMPREF2948_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08465 KV814743.1 Protein Homology CDS 20937 21293 . + 0 ID=cds-OFQ20032.1;Parent=gene-HMPREF2948_08465;Dbxref=NCBI_GP:OFQ20032.1;Name=OFQ20032.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064699.1;locus_tag=HMPREF2948_08465;product=dihydroneopterin aldolase;protein_id=OFQ20032.1;transl_table=11 KV814743.1 Genbank gene 21348 21959 . - . ID=gene-HMPREF2948_08470;Name=HMPREF2948_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08470 KV814743.1 Protein Homology CDS 21348 21959 . - 0 ID=cds-OFQ20033.1;Parent=gene-HMPREF2948_08470;Dbxref=NCBI_GP:OFQ20033.1;Name=OFQ20033.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697319.1;locus_tag=HMPREF2948_08470;product=Co/Zn/Cd efflux system protein;protein_id=OFQ20033.1;transl_table=11 KV814743.1 Genbank gene 22044 22427 . + . ID=gene-HMPREF2948_08475;Name=HMPREF2948_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08475 KV814743.1 Protein Homology CDS 22044 22427 . + 0 ID=cds-OFQ20034.1;Parent=gene-HMPREF2948_08475;Dbxref=NCBI_GP:OFQ20034.1;Name=OFQ20034.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243601.1;locus_tag=HMPREF2948_08475;product=MerR family transcriptional regulator;protein_id=OFQ20034.1;transl_table=11 KV814743.1 Genbank gene 22479 23576 . - . ID=gene-HMPREF2948_08480;Name=HMPREF2948_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08480 KV814743.1 Protein Homology CDS 22479 23576 . - 0 ID=cds-OFQ20035.1;Parent=gene-HMPREF2948_08480;Dbxref=NCBI_GP:OFQ20035.1;Name=OFQ20035.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003675858.1;locus_tag=HMPREF2948_08480;product=hypothetical protein;protein_id=OFQ20035.1;transl_table=11 KV814743.1 Genbank gene 23569 24264 . - . ID=gene-HMPREF2948_08485;Name=HMPREF2948_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08485 KV814743.1 Protein Homology CDS 23569 24264 . - 0 ID=cds-OFQ20095.1;Parent=gene-HMPREF2948_08485;Dbxref=NCBI_GP:OFQ20095.1;Name=OFQ20095.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009751811.1;locus_tag=HMPREF2948_08485;product=ABC transporter ATP-binding protein;protein_id=OFQ20095.1;transl_table=11 KV814743.1 Genbank gene 24261 25058 . - . ID=gene-HMPREF2948_08490;Name=HMPREF2948_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08490 KV814743.1 Protein Homology CDS 24261 25058 . - 0 ID=cds-OFQ20036.1;Parent=gene-HMPREF2948_08490;Dbxref=NCBI_GP:OFQ20036.1;Name=OFQ20036.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003776012.1;locus_tag=HMPREF2948_08490;product=ABC transporter permease;protein_id=OFQ20036.1;transl_table=11 KV814743.1 Genbank gene 25080 26057 . - . ID=gene-HMPREF2948_08495;Name=HMPREF2948_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08495 KV814743.1 Protein Homology CDS 25080 26057 . - 0 ID=cds-OFQ20037.1;Parent=gene-HMPREF2948_08495;Dbxref=NCBI_GP:OFQ20037.1;Name=OFQ20037.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003686208.1;locus_tag=HMPREF2948_08495;product=hypothetical protein;protein_id=OFQ20037.1;transl_table=11 KV814743.1 Genbank gene 26191 26550 . - . ID=gene-HMPREF2948_08500;Name=HMPREF2948_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08500 KV814743.1 Protein Homology CDS 26191 26550 . - 0 ID=cds-OFQ20038.1;Parent=gene-HMPREF2948_08500;Dbxref=NCBI_GP:OFQ20038.1;Name=OFQ20038.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007243593.1;locus_tag=HMPREF2948_08500;product=hypothetical protein;protein_id=OFQ20038.1;transl_table=11 KV814743.1 Genbank gene 26618 28504 . - . ID=gene-HMPREF2948_08505;Name=HMPREF2948_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08505 KV814743.1 Protein Homology CDS 26618 28504 . - 0 ID=cds-OFQ20039.1;Parent=gene-HMPREF2948_08505;Dbxref=NCBI_GP:OFQ20039.1;Name=OFQ20039.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680474.1;locus_tag=HMPREF2948_08505;product=DEAD/DEAH box helicase;protein_id=OFQ20039.1;transl_table=11 KV814743.1 Genbank gene 28505 29560 . - . ID=gene-HMPREF2948_08510;Name=HMPREF2948_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08510 KV814743.1 Protein Homology CDS 28505 29560 . - 0 ID=cds-OFQ20040.1;Parent=gene-HMPREF2948_08510;Dbxref=NCBI_GP:OFQ20040.1;Name=OFQ20040.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_003680475.1;locus_tag=HMPREF2948_08510;product=restriction endonuclease;protein_id=OFQ20040.1;transl_table=11 KV814743.1 Genbank gene 29560 30681 . - . ID=gene-HMPREF2948_08515;Name=HMPREF2948_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08515 KV814743.1 Protein Homology CDS 29560 30681 . - 0 ID=cds-OFQ20041.1;Parent=gene-HMPREF2948_08515;Dbxref=NCBI_GP:OFQ20041.1;Name=OFQ20041.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012221464.1;locus_tag=HMPREF2948_08515;product=DNA cytosine methyltransferase;protein_id=OFQ20041.1;transl_table=11 KV814743.1 Genbank pseudogene 30914 31249 . - . ID=gene-HMPREF2948_08520;Name=HMPREF2948_08520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_08520;pseudo=true KV814743.1 Protein Homology CDS 30914 31249 . - 0 ID=cds-HMPREF2948_08520;Parent=gene-HMPREF2948_08520;Note=incomplete%3B partial in the middle of a contig%3B missing start;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064709.1;locus_tag=HMPREF2948_08520;product=hypothetical protein;pseudo=true;transl_table=11 KV814743.1 Genbank gene 31310 32719 . - . ID=gene-HMPREF2948_08525;Name=HMPREF2948_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08525 KV814743.1 Protein Homology CDS 31310 32719 . - 0 ID=cds-OFQ20042.1;Parent=gene-HMPREF2948_08525;Dbxref=NCBI_GP:OFQ20042.1;Name=OFQ20042.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014551089.1;locus_tag=HMPREF2948_08525;product=cell division protein FtsQ;protein_id=OFQ20042.1;transl_table=11 KV814743.1 Genbank gene 32721 33443 . - . ID=gene-HMPREF2948_08530;Name=HMPREF2948_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08530 KV814743.1 Protein Homology CDS 32721 33443 . - 0 ID=cds-OFQ20043.1;Parent=gene-HMPREF2948_08530;Dbxref=NCBI_GP:OFQ20043.1;Name=OFQ20043.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064711.1;locus_tag=HMPREF2948_08530;product=acyl-phosphate glycerol 3-phosphate acyltransferase;protein_id=OFQ20043.1;transl_table=11 KV814743.1 Genbank gene 33531 34235 . + . ID=gene-HMPREF2948_08535;Name=HMPREF2948_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08535 KV814743.1 Protein Homology CDS 33531 34235 . + 0 ID=cds-OFQ20044.1;Parent=gene-HMPREF2948_08535;Dbxref=NCBI_GP:OFQ20044.1;Name=OFQ20044.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005669966.1;locus_tag=HMPREF2948_08535;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=OFQ20044.1;transl_table=11 KV814743.1 Genbank gene 34300 36132 . - . ID=gene-HMPREF2948_08540;Name=HMPREF2948_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08540 KV814743.1 Protein Homology CDS 34300 36132 . - 0 ID=cds-OFQ20045.1;Parent=gene-HMPREF2948_08540;Dbxref=NCBI_GP:OFQ20045.1;Name=OFQ20045.1;Note=Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355475.1;locus_tag=HMPREF2948_08540;product=glutamine--fructose-6-phosphate aminotransferase;protein_id=OFQ20045.1;transl_table=11 KV814743.1 Genbank gene 36183 36965 . - . ID=gene-HMPREF2948_08545;Name=HMPREF2948_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08545 KV814743.1 Protein Homology CDS 36183 36965 . - 0 ID=cds-OFQ20096.1;Parent=gene-HMPREF2948_08545;Dbxref=NCBI_GP:OFQ20096.1;Name=OFQ20096.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696945.1;locus_tag=HMPREF2948_08545;product=XRE family transcriptional regulator;protein_id=OFQ20096.1;transl_table=11 KV814743.1 Genbank gene 37092 37364 . - . ID=gene-HMPREF2948_08550;Name=HMPREF2948_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08550 KV814743.1 Protein Homology CDS 37092 37364 . - 0 ID=cds-OFQ20046.1;Parent=gene-HMPREF2948_08550;Dbxref=NCBI_GP:OFQ20046.1;Name=OFQ20046.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005819506.1;locus_tag=HMPREF2948_08550;product=DNA-binding protein;protein_id=OFQ20046.1;transl_table=11 KV814743.1 Genbank gene 37503 38093 . - . ID=gene-HMPREF2948_08555;Name=HMPREF2948_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08555 KV814743.1 Protein Homology CDS 37503 38093 . - 0 ID=cds-OFQ20047.1;Parent=gene-HMPREF2948_08555;Dbxref=NCBI_GP:OFQ20047.1;Name=OFQ20047.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005574341.1;locus_tag=HMPREF2948_08555;product=hypothetical protein;protein_id=OFQ20047.1;transl_table=11 KV814743.1 Genbank gene 38105 39169 . - . ID=gene-HMPREF2948_08560;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=HMPREF2948_08560 KV814743.1 Protein Homology CDS 38105 39169 . - 0 ID=cds-OFQ20048.1;Parent=gene-HMPREF2948_08560;Dbxref=NCBI_GP:OFQ20048.1;Name=OFQ20048.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014992018.1;locus_tag=HMPREF2948_08560;product=uroporphyrinogen decarboxylase;protein_id=OFQ20048.1;transl_table=11 KV814743.1 Genbank gene 39180 39974 . - . ID=gene-HMPREF2948_08565;Name=HMPREF2948_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08565 KV814743.1 Protein Homology CDS 39180 39974 . - 0 ID=cds-OFQ20049.1;Parent=gene-HMPREF2948_08565;Dbxref=NCBI_GP:OFQ20049.1;Name=OFQ20049.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064717.1;locus_tag=HMPREF2948_08565;product=NADH pyrophosphatase;protein_id=OFQ20049.1;transl_table=11 KV814743.1 Genbank gene 40081 41295 . - . ID=gene-HMPREF2948_08570;Name=HMPREF2948_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08570 KV814743.1 Protein Homology CDS 40081 41295 . - 0 ID=cds-OFQ20050.1;Parent=gene-HMPREF2948_08570;Dbxref=NCBI_GP:OFQ20050.1;Name=OFQ20050.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44727.1;locus_tag=HMPREF2948_08570;product=tyrosine transporter;protein_id=OFQ20050.1;transl_table=11 KV814743.1 Genbank gene 41472 42335 . + . ID=gene-HMPREF2948_08575;Name=HMPREF2948_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08575 KV814743.1 Protein Homology CDS 41472 42335 . + 0 ID=cds-OFQ20051.1;Parent=gene-HMPREF2948_08575;Dbxref=NCBI_GP:OFQ20051.1;Name=OFQ20051.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693694.1;locus_tag=HMPREF2948_08575;product=hypothetical protein;protein_id=OFQ20051.1;transl_table=11 KV814743.1 Genbank gene 42344 43183 . + . ID=gene-HMPREF2948_08580;Name=HMPREF2948_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08580 KV814743.1 Protein Homology CDS 42344 43183 . + 0 ID=cds-OFQ20052.1;Parent=gene-HMPREF2948_08580;Dbxref=NCBI_GP:OFQ20052.1;Name=OFQ20052.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698307.1;locus_tag=HMPREF2948_08580;product=hypothetical protein;protein_id=OFQ20052.1;transl_table=11 KV814743.1 Genbank gene 43482 45077 . + . ID=gene-HMPREF2948_08585;Name=HMPREF2948_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08585 KV814743.1 Protein Homology CDS 43482 45077 . + 0 ID=cds-OFQ20097.1;Parent=gene-HMPREF2948_08585;Dbxref=NCBI_GP:OFQ20097.1;Name=OFQ20097.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005700266.1;locus_tag=HMPREF2948_08585;product=lactate permease;protein_id=OFQ20097.1;transl_table=11 KV814743.1 Genbank gene 45174 45905 . + . ID=gene-HMPREF2948_08590;Name=HMPREF2948_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08590 KV814743.1 Protein Homology CDS 45174 45905 . + 0 ID=cds-OFQ20053.1;Parent=gene-HMPREF2948_08590;Dbxref=NCBI_GP:OFQ20053.1;Name=OFQ20053.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015432719.1;locus_tag=HMPREF2948_08590;product=hypothetical protein;protein_id=OFQ20053.1;transl_table=11 KV814743.1 Genbank gene 45907 47319 . + . ID=gene-HMPREF2948_08595;Name=HMPREF2948_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08595 KV814743.1 Protein Homology CDS 45907 47319 . + 0 ID=cds-OFQ20054.1;Parent=gene-HMPREF2948_08595;Dbxref=NCBI_GP:OFQ20054.1;Name=OFQ20054.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005634829.1;locus_tag=HMPREF2948_08595;product=amino acid dehydrogenase;protein_id=OFQ20054.1;transl_table=11 KV814743.1 Genbank gene 47325 48023 . + . ID=gene-HMPREF2948_08600;Name=HMPREF2948_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08600 KV814743.1 Protein Homology CDS 47325 48023 . + 0 ID=cds-OFQ20055.1;Parent=gene-HMPREF2948_08600;Dbxref=NCBI_GP:OFQ20055.1;Name=OFQ20055.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005824297.1;locus_tag=HMPREF2948_08600;product=lactate utilization protein B/C;protein_id=OFQ20055.1;transl_table=11 KV814743.1 Genbank gene 48121 49239 . + . ID=gene-HMPREF2948_08605;Name=HMPREF2948_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08605 KV814743.1 Protein Homology CDS 48121 49239 . + 0 ID=cds-OFQ20056.1;Parent=gene-HMPREF2948_08605;Dbxref=NCBI_GP:OFQ20056.1;Name=OFQ20056.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699677.1;locus_tag=HMPREF2948_08605;product=anhydro-N-acetylmuramic acid kinase;protein_id=OFQ20056.1;transl_table=11 KV814743.1 Genbank gene 49243 50151 . + . ID=gene-HMPREF2948_08610;Name=HMPREF2948_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08610 KV814743.1 Protein Homology CDS 49243 50151 . + 0 ID=cds-OFQ20057.1;Parent=gene-HMPREF2948_08610;Dbxref=NCBI_GP:OFQ20057.1;Name=OFQ20057.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064723.1;locus_tag=HMPREF2948_08610;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=OFQ20057.1;transl_table=11 KV814743.1 Genbank gene 50212 51870 . - . ID=gene-HMPREF2948_08615;Name=HMPREF2948_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08615 KV814743.1 Protein Homology CDS 50212 51870 . - 0 ID=cds-OFQ20058.1;Parent=gene-HMPREF2948_08615;Dbxref=NCBI_GP:OFQ20058.1;Name=OFQ20058.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_019518365.1;locus_tag=HMPREF2948_08615;product=alpha-D-phosphohexomutase;protein_id=OFQ20058.1;transl_table=11 KV814743.1 Genbank gene 52051 52590 . - . ID=gene-HMPREF2948_08620;Name=HMPREF2948_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08620 KV814743.1 Protein Homology CDS 52051 52590 . - 0 ID=cds-OFQ20059.1;Parent=gene-HMPREF2948_08620;Dbxref=NCBI_GP:OFQ20059.1;Name=OFQ20059.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500187.1;locus_tag=HMPREF2948_08620;product=hypothetical protein;protein_id=OFQ20059.1;transl_table=11 KV814743.1 Genbank gene 52774 53631 . + . ID=gene-HMPREF2948_08625;Name=HMPREF2948_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08625 KV814743.1 Protein Homology CDS 52774 53631 . + 0 ID=cds-OFQ20060.1;Parent=gene-HMPREF2948_08625;Dbxref=NCBI_GP:OFQ20060.1;Name=OFQ20060.1;Note=catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CLV5.1;locus_tag=HMPREF2948_08625;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=OFQ20060.1;transl_table=11 KV814743.1 Genbank gene 53725 54495 . + . ID=gene-HMPREF2948_08630;Name=HMPREF2948_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08630 KV814743.1 Protein Homology CDS 53725 54495 . + 0 ID=cds-OFQ20061.1;Parent=gene-HMPREF2948_08630;Dbxref=NCBI_GP:OFQ20061.1;Name=OFQ20061.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655557.1;locus_tag=HMPREF2948_08630;product=lipooligosaccharide biosynthesis protein lpsA;protein_id=OFQ20061.1;transl_table=11 KV814743.1 Genbank gene 54557 55546 . + . ID=gene-HMPREF2948_08635;Name=HMPREF2948_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08635 KV814743.1 Protein Homology CDS 54557 55546 . + 0 ID=cds-OFQ20062.1;Parent=gene-HMPREF2948_08635;Dbxref=NCBI_GP:OFQ20062.1;Name=OFQ20062.1;Note=catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550990.1;locus_tag=HMPREF2948_08635;product=o-succinylbenzoate synthase;protein_id=OFQ20062.1;transl_table=11 KV814743.1 Genbank gene 55607 56059 . + . ID=gene-HMPREF2948_08640;Name=HMPREF2948_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08640 KV814743.1 Protein Homology CDS 55607 56059 . + 0 ID=cds-OFQ20063.1;Parent=gene-HMPREF2948_08640;Dbxref=NCBI_GP:OFQ20063.1;Name=OFQ20063.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064728.1;locus_tag=HMPREF2948_08640;product=3-dehydroquinate dehydratase;protein_id=OFQ20063.1;transl_table=11 KV814743.1 Genbank gene 56219 56677 . + . ID=gene-HMPREF2948_08645;Name=HMPREF2948_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08645 KV814743.1 Protein Homology CDS 56219 56677 . + 0 ID=cds-OFQ20064.1;Parent=gene-HMPREF2948_08645;Dbxref=NCBI_GP:OFQ20064.1;Name=OFQ20064.1;Note=composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626697.1;locus_tag=HMPREF2948_08645;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=OFQ20064.1;transl_table=11 KV814743.1 Genbank gene 56738 58084 . + . ID=gene-HMPREF2948_08650;Name=HMPREF2948_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08650 KV814743.1 Protein Homology CDS 56738 58084 . + 0 ID=cds-OFQ20065.1;Parent=gene-HMPREF2948_08650;Dbxref=NCBI_GP:OFQ20065.1;Name=OFQ20065.1;Note=an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005751817.1;locus_tag=HMPREF2948_08650;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=OFQ20065.1;transl_table=11 KV814743.1 Genbank gene 58177 58431 . + . ID=gene-HMPREF2948_08655;Name=HMPREF2948_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08655 KV814743.1 Protein Homology CDS 58177 58431 . + 0 ID=cds-OFQ20066.1;Parent=gene-HMPREF2948_08655;Dbxref=NCBI_GP:OFQ20066.1;Name=OFQ20066.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272322.1;locus_tag=HMPREF2948_08655;product=hypothetical protein;protein_id=OFQ20066.1;transl_table=11 KV814743.1 Genbank gene 58431 59855 . + . ID=gene-HMPREF2948_08660;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=HMPREF2948_08660 KV814743.1 Protein Homology CDS 58431 59855 . + 0 ID=cds-OFQ20067.1;Parent=gene-HMPREF2948_08660;Dbxref=NCBI_GP:OFQ20067.1;Name=OFQ20067.1;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44963.1;locus_tag=HMPREF2948_08660;product=sodium/panthothenate symporter;protein_id=OFQ20067.1;transl_table=11 KV814743.1 Genbank gene 59872 60747 . + . ID=gene-HMPREF2948_08665;Name=HMPREF2948_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08665 KV814743.1 Protein Homology CDS 59872 60747 . + 0 ID=cds-OFQ20068.1;Parent=gene-HMPREF2948_08665;Dbxref=NCBI_GP:OFQ20068.1;Name=OFQ20068.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698339.1;locus_tag=HMPREF2948_08665;product=transporter;protein_id=OFQ20068.1;transl_table=11 KV814743.1 Genbank gene 60760 61647 . + . ID=gene-HMPREF2948_08670;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=HMPREF2948_08670 KV814743.1 Protein Homology CDS 60760 61647 . + 0 ID=cds-OFQ20069.1;Parent=gene-HMPREF2948_08670;Dbxref=NCBI_GP:OFQ20069.1;Name=OFQ20069.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698341.1;locus_tag=HMPREF2948_08670;product=ribosomal protein L11 methyltransferase;protein_id=OFQ20069.1;transl_table=11 KV814743.1 Genbank gene 61796 62776 . + . ID=gene-HMPREF2948_08675;Name=HMPREF2948_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08675 KV814743.1 Protein Homology CDS 61796 62776 . + 0 ID=cds-OFQ20070.1;Parent=gene-HMPREF2948_08675;Dbxref=NCBI_GP:OFQ20070.1;Name=OFQ20070.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011272326.1;locus_tag=HMPREF2948_08675;product=tRNA dihydrouridine synthase DusB;protein_id=OFQ20070.1;transl_table=11 KV814743.1 Genbank gene 62770 63069 . + . ID=gene-HMPREF2948_08680;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=HMPREF2948_08680 KV814743.1 Protein Homology CDS 62770 63069 . + 0 ID=cds-OFQ20071.1;Parent=gene-HMPREF2948_08680;Dbxref=NCBI_GP:OFQ20071.1;Name=OFQ20071.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65V72.1;locus_tag=HMPREF2948_08680;product=Fis family transcriptional regulator;protein_id=OFQ20071.1;transl_table=11 KV814743.1 Genbank gene 63116 63916 . - . ID=gene-HMPREF2948_08685;Name=HMPREF2948_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08685 KV814743.1 Protein Homology CDS 63116 63916 . - 0 ID=cds-OFQ20072.1;Parent=gene-HMPREF2948_08685;Dbxref=NCBI_GP:OFQ20072.1;Name=OFQ20072.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699673.1;locus_tag=HMPREF2948_08685;product=energy transducer TonB;protein_id=OFQ20072.1;transl_table=11 KV814743.1 Genbank gene 63913 64389 . - . ID=gene-HMPREF2948_08690;Name=HMPREF2948_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08690 KV814743.1 Protein Homology CDS 63913 64389 . - 0 ID=cds-OFQ20073.1;Parent=gene-HMPREF2948_08690;Dbxref=NCBI_GP:OFQ20073.1;Name=OFQ20073.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064738.1;locus_tag=HMPREF2948_08690;product=TonB system transport protein ExbD;protein_id=OFQ20073.1;transl_table=11 KV814743.1 Genbank gene 64392 64844 . - . ID=gene-HMPREF2948_08695;Name=HMPREF2948_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08695 KV814743.1 Protein Homology CDS 64392 64844 . - 0 ID=cds-OFQ20074.1;Parent=gene-HMPREF2948_08695;Dbxref=NCBI_GP:OFQ20074.1;Name=OFQ20074.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005538526.1;locus_tag=HMPREF2948_08695;product=TonB-system energizer ExbB;protein_id=OFQ20074.1;transl_table=11 KV814743.1 Genbank gene 65020 65487 . - . ID=gene-HMPREF2948_08700;Name=HMPREF2948_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08700 KV814743.1 Protein Homology CDS 65020 65487 . - 0 ID=cds-OFQ20075.1;Parent=gene-HMPREF2948_08700;Dbxref=NCBI_GP:OFQ20075.1;Name=OFQ20075.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011608650.1;locus_tag=HMPREF2948_08700;product=peroxiredoxin;protein_id=OFQ20075.1;transl_table=11 KV814743.1 Genbank gene 65605 66501 . + . ID=gene-HMPREF2948_08705;Name=HMPREF2948_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08705 KV814743.1 Protein Homology CDS 65605 66501 . + 0 ID=cds-OFQ20076.1;Parent=gene-HMPREF2948_08705;Dbxref=NCBI_GP:OFQ20076.1;Name=OFQ20076.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199447.1;locus_tag=HMPREF2948_08705;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=OFQ20076.1;transl_table=11 KV814743.1 Genbank gene 66604 67605 . + . ID=gene-HMPREF2948_08710;Name=HMPREF2948_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08710 KV814743.1 Protein Homology CDS 66604 67605 . + 0 ID=cds-OFQ20077.1;Parent=gene-HMPREF2948_08710;Dbxref=NCBI_GP:OFQ20077.1;Name=OFQ20077.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014325734.1;locus_tag=HMPREF2948_08710;product=outer membrane assembly protein BamC;protein_id=OFQ20077.1;transl_table=11 KV814743.1 Genbank gene 67669 67965 . - . ID=gene-HMPREF2948_08715;Name=HMPREF2948_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08715 KV814743.1 Protein Homology CDS 67669 67965 . - 0 ID=cds-OFQ20078.1;Parent=gene-HMPREF2948_08715;Dbxref=NCBI_GP:OFQ20078.1;Name=OFQ20078.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648811.1;locus_tag=HMPREF2948_08715;product=dithiol-disulfide isomerase;protein_id=OFQ20078.1;transl_table=11 KV814743.1 Genbank gene 67991 68245 . - . ID=gene-HMPREF2948_08720;Name=HMPREF2948_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08720 KV814743.1 Protein Homology CDS 67991 68245 . - 0 ID=cds-OFQ20079.1;Parent=gene-HMPREF2948_08720;Dbxref=NCBI_GP:OFQ20079.1;Name=OFQ20079.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064744.1;locus_tag=HMPREF2948_08720;product=hypothetical protein;protein_id=OFQ20079.1;transl_table=11 KV814743.1 Genbank gene 68311 68661 . - . ID=gene-HMPREF2948_08725;Name=HMPREF2948_08725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08725 KV814743.1 Protein Homology CDS 68311 68661 . - 0 ID=cds-OFQ20080.1;Parent=gene-HMPREF2948_08725;Dbxref=NCBI_GP:OFQ20080.1;Name=OFQ20080.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664106.1;locus_tag=HMPREF2948_08725;product=arsenate reductase (glutaredoxin);protein_id=OFQ20080.1;transl_table=11 KV814743.1 Genbank gene 68756 69802 . + . ID=gene-HMPREF2948_08730;Name=HMPREF2948_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08730 KV814743.1 Protein Homology CDS 68756 69802 . + 0 ID=cds-OFQ20081.1;Parent=gene-HMPREF2948_08730;Dbxref=NCBI_GP:OFQ20081.1;Name=OFQ20081.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696894.1;locus_tag=HMPREF2948_08730;product=AI-2E family transporter;protein_id=OFQ20081.1;transl_table=11 KV814743.1 Genbank gene 69839 70576 . - . ID=gene-HMPREF2948_08735;Name=HMPREF2948_08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08735 KV814743.1 Protein Homology CDS 69839 70576 . - 0 ID=cds-OFQ20082.1;Parent=gene-HMPREF2948_08735;Dbxref=NCBI_GP:OFQ20082.1;Name=OFQ20082.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696892.1;locus_tag=HMPREF2948_08735;product=tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA;protein_id=OFQ20082.1;transl_table=11 KV814743.1 Genbank gene 70638 71549 . + . ID=gene-HMPREF2948_08740;Name=HMPREF2948_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08740 KV814743.1 Protein Homology CDS 70638 71549 . + 0 ID=cds-OFQ20083.1;Parent=gene-HMPREF2948_08740;Dbxref=NCBI_GP:OFQ20083.1;Name=OFQ20083.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636626.1;locus_tag=HMPREF2948_08740;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=OFQ20083.1;transl_table=11 KV814743.1 Genbank gene 71595 72095 . + . ID=gene-HMPREF2948_08745;Name=HMPREF2948_08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08745 KV814743.1 Protein Homology CDS 71595 72095 . + 0 ID=cds-OFQ20084.1;Parent=gene-HMPREF2948_08745;Dbxref=NCBI_GP:OFQ20084.1;Name=OFQ20084.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719122.1;locus_tag=HMPREF2948_08745;product=ribonuclease E activity regulator RraA;protein_id=OFQ20084.1;transl_table=11 KV814743.1 Genbank gene 72260 73645 . + . ID=gene-HMPREF2948_08750;Name=HMPREF2948_08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08750 KV814743.1 Protein Homology CDS 72260 73645 . + 0 ID=cds-OFQ20085.1;Parent=gene-HMPREF2948_08750;Dbxref=NCBI_GP:OFQ20085.1;Name=OFQ20085.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636624.1;locus_tag=HMPREF2948_08750;product=transporter;protein_id=OFQ20085.1;transl_table=11 KV814743.1 Genbank gene 73706 76162 . - . ID=gene-HMPREF2948_08755;Name=HMPREF2948_08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08755 KV814743.1 Protein Homology CDS 73706 76162 . - 0 ID=cds-OFQ20086.1;Parent=gene-HMPREF2948_08755;Dbxref=NCBI_GP:OFQ20086.1;Name=OFQ20086.1;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698189.1;locus_tag=HMPREF2948_08755;product=glycerol-3-phosphate 1-O-acyltransferase;protein_id=OFQ20086.1;transl_table=11 KV814743.1 Genbank gene 76381 77007 . + . ID=gene-HMPREF2948_08760;Name=HMPREF2948_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08760 KV814743.1 Protein Homology CDS 76381 77007 . + 0 ID=cds-OFQ20087.1;Parent=gene-HMPREF2948_08760;Dbxref=NCBI_GP:OFQ20087.1;Name=OFQ20087.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632942.1;locus_tag=HMPREF2948_08760;product=repressor LexA;protein_id=OFQ20087.1;transl_table=11 KV814743.1 Genbank gene 77129 77953 . + . ID=gene-HMPREF2948_08765;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=HMPREF2948_08765 KV814743.1 Protein Homology CDS 77129 77953 . + 0 ID=cds-OFQ20088.1;Parent=gene-HMPREF2948_08765;Dbxref=NCBI_GP:OFQ20088.1;Name=OFQ20088.1;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;inference=EXISTENCE: similar to AA sequence:SwissProt:P44859.1;locus_tag=HMPREF2948_08765;product=diaminopimelate epimerase;protein_id=OFQ20088.1;transl_table=11 KV814743.1 Genbank gene 78005 78457 . - . ID=gene-HMPREF2948_08770;Name=HMPREF2948_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08770 KV814743.1 Protein Homology CDS 78005 78457 . - 0 ID=cds-OFQ20089.1;Parent=gene-HMPREF2948_08770;Dbxref=NCBI_GP:OFQ20089.1;Name=OFQ20089.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696884.1;locus_tag=HMPREF2948_08770;product=hypothetical protein;protein_id=OFQ20089.1;transl_table=11 KV814743.1 Genbank gene 78532 79464 . - . ID=gene-HMPREF2948_08775;Name=HMPREF2948_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08775 KV814743.1 Protein Homology CDS 78532 79464 . - 0 ID=cds-OFQ20090.1;Parent=gene-HMPREF2948_08775;Dbxref=NCBI_GP:OFQ20090.1;Name=OFQ20090.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698186.1;locus_tag=HMPREF2948_08775;product=tRNA dihydrouridine synthase DusC;protein_id=OFQ20090.1;transl_table=11 KV814743.1 Genbank gene 79464 80327 . - . ID=gene-HMPREF2948_08780;Name=HMPREF2948_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08780 KV814743.1 Protein Homology CDS 79464 80327 . - 0 ID=cds-OFQ20091.1;Parent=gene-HMPREF2948_08780;Dbxref=NCBI_GP:OFQ20091.1;Name=OFQ20091.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005568247.1;locus_tag=HMPREF2948_08780;product=molecular chaperone DjlA;protein_id=OFQ20091.1;transl_table=11 KV814743.1 Genbank gene 80435 81076 . - . ID=gene-HMPREF2948_08785;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=HMPREF2948_08785 KV814743.1 Protein Homology CDS 80435 81076 . - 0 ID=cds-OFQ20092.1;Parent=gene-HMPREF2948_08785;Dbxref=NCBI_GP:OFQ20092.1;Name=OFQ20092.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;inference=EXISTENCE: similar to AA sequence:SwissProt:P43855.1;locus_tag=HMPREF2948_08785;product=orotate phosphoribosyltransferase;protein_id=OFQ20092.1;transl_table=11 KV814743.1 Genbank gene 81086 81802 . - . ID=gene-HMPREF2948_08790;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=HMPREF2948_08790 KV814743.1 Protein Homology CDS 81086 81802 . - 0 ID=cds-OFQ20093.1;Parent=gene-HMPREF2948_08790;Dbxref=NCBI_GP:OFQ20093.1;Name=OFQ20093.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632808.1;locus_tag=HMPREF2948_08790;product=ribonuclease PH;protein_id=OFQ20093.1;transl_table=11 KV814743.1 Genbank gene 81865 83607 . - . ID=gene-HMPREF2948_08795;Name=HMPREF2948_08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08795 KV814743.1 Protein Homology CDS 81865 83607 . - 0 ID=cds-OFQ20094.1;Parent=gene-HMPREF2948_08795;Dbxref=NCBI_GP:OFQ20094.1;Name=OFQ20094.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696879.1;locus_tag=HMPREF2948_08795;product=sodium-independent anion transporter;protein_id=OFQ20094.1;transl_table=11 KV814743.1 Genbank gene 83733 83822 . + . ID=gene-HMPREF2948_08800;Name=HMPREF2948_08800;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08800 KV814743.1 tRNAscan-SE tRNA 83733 83822 . + . ID=rna-HMPREF2948_08800;Parent=gene-HMPREF2948_08800;anticodon=(pos:83767..83769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08800;product=tRNA-Ser KV814743.1 tRNAscan-SE exon 83733 83822 . + . ID=exon-HMPREF2948_08800-1;Parent=rna-HMPREF2948_08800;anticodon=(pos:83767..83769);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08800;product=tRNA-Ser KV814743.1 Genbank gene 83971 84047 . - . ID=gene-HMPREF2948_08805;Name=HMPREF2948_08805;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08805 KV814743.1 tRNAscan-SE tRNA 83971 84047 . - . ID=rna-HMPREF2948_08805;Parent=gene-HMPREF2948_08805;anticodon=(pos:complement(84011..84013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08805;product=tRNA-Arg KV814743.1 tRNAscan-SE exon 83971 84047 . - . ID=exon-HMPREF2948_08805-1;Parent=rna-HMPREF2948_08805;anticodon=(pos:complement(84011..84013));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08805;product=tRNA-Arg KV814743.1 Genbank gene 84446 85303 . + . ID=gene-HMPREF2948_08810;Name=HMPREF2948_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08810 KV814743.1 Protein Homology CDS 84446 85303 . + 0 ID=cds-OFQ19794.1;Parent=gene-HMPREF2948_08810;Dbxref=NCBI_GP:OFQ19794.1;Name=OFQ19794.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771785.1;locus_tag=HMPREF2948_08810;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=OFQ19794.1;transl_table=11 KV814743.1 Genbank gene 85349 86683 . - . ID=gene-HMPREF2948_08815;Name=HMPREF2948_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08815 KV814743.1 Protein Homology CDS 85349 86683 . - 0 ID=cds-OFQ19795.1;Parent=gene-HMPREF2948_08815;Dbxref=NCBI_GP:OFQ19795.1;Name=OFQ19795.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44856.1;locus_tag=HMPREF2948_08815;product=NADH dehydrogenase;protein_id=OFQ19795.1;transl_table=11 KV814743.1 Genbank gene 86784 87407 . - . ID=gene-HMPREF2948_08820;Name=HMPREF2948_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08820 KV814743.1 Protein Homology CDS 86784 87407 . - 0 ID=cds-OFQ19796.1;Parent=gene-HMPREF2948_08820;Dbxref=NCBI_GP:OFQ19796.1;Name=OFQ19796.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694148.1;locus_tag=HMPREF2948_08820;product=hypothetical protein;protein_id=OFQ19796.1;transl_table=11 KV814743.1 Genbank gene 87417 88244 . - . ID=gene-HMPREF2948_08825;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=HMPREF2948_08825 KV814743.1 Protein Homology CDS 87417 88244 . - 0 ID=cds-OFQ19797.1;Parent=gene-HMPREF2948_08825;Dbxref=NCBI_GP:OFQ19797.1;Name=OFQ19797.1;Note=hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP;gbkey=CDS;gene=apaH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005664434.1;locus_tag=HMPREF2948_08825;product=diadenosine tetraphosphatase;protein_id=OFQ19797.1;transl_table=11 KV814743.1 Genbank gene 88260 89123 . - . ID=gene-HMPREF2948_08830;Name=HMPREF2948_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08830 KV814743.1 Protein Homology CDS 88260 89123 . - 0 ID=cds-OFQ19798.1;Parent=gene-HMPREF2948_08830;Dbxref=NCBI_GP:OFQ19798.1;Name=OFQ19798.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005649513.1;locus_tag=HMPREF2948_08830;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase;protein_id=OFQ19798.1;transl_table=11 KV814743.1 Genbank gene 89165 90196 . - . ID=gene-HMPREF2948_08835;Name=HMPREF2948_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08835 KV814743.1 Protein Homology CDS 89165 90196 . - 0 ID=cds-OFQ19799.1;Parent=gene-HMPREF2948_08835;Dbxref=NCBI_GP:OFQ19799.1;Name=OFQ19799.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014550368.1;locus_tag=HMPREF2948_08835;product=heptosyltransferase;protein_id=OFQ19799.1;transl_table=11 KV814743.1 Genbank gene 90189 90866 . - . ID=gene-HMPREF2948_08840;Name=HMPREF2948_08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08840 KV814743.1 Protein Homology CDS 90189 90866 . - 0 ID=cds-OFQ19800.1;Parent=gene-HMPREF2948_08840;Dbxref=NCBI_GP:OFQ19800.1;Name=OFQ19800.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698671.1;locus_tag=HMPREF2948_08840;product=beta-1%2C4-galactosyltransferase;protein_id=OFQ19800.1;transl_table=11 KV814743.1 Genbank gene 91193 91411 . + . ID=gene-HMPREF2948_08845;Name=HMPREF2948_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08845 KV814743.1 Protein Homology CDS 91193 91411 . + 0 ID=cds-OFQ19801.1;Parent=gene-HMPREF2948_08845;Dbxref=NCBI_GP:OFQ19801.1;Name=OFQ19801.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q5PGJ4.1;locus_tag=HMPREF2948_08845;product=translation initiation factor IF-1;protein_id=OFQ19801.1;transl_table=11 KV814743.1 Genbank gene 91603 91980 . + . ID=gene-HMPREF2948_08850;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=HMPREF2948_08850 KV814743.1 Protein Homology CDS 91603 91980 . + 0 ID=cds-OFQ19802.1;Parent=gene-HMPREF2948_08850;Dbxref=NCBI_GP:OFQ19802.1;Name=OFQ19802.1;Note=binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21;gbkey=CDS;gene=rpsF;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005627620.1;locus_tag=HMPREF2948_08850;product=30S ribosomal protein S6;protein_id=OFQ19802.1;transl_table=11 KV814743.1 Genbank gene 91967 92293 . + . ID=gene-HMPREF2948_08855;Name=HMPREF2948_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08855 KV814743.1 Protein Homology CDS 91967 92293 . + 0 ID=cds-OFQ19803.1;Parent=gene-HMPREF2948_08855;Dbxref=NCBI_GP:OFQ19803.1;Name=OFQ19803.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355465.1;locus_tag=HMPREF2948_08855;product=primosomal replication protein N;protein_id=OFQ19803.1;transl_table=11 KV814743.1 Genbank gene 92305 92535 . + . ID=gene-HMPREF2948_08860;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=HMPREF2948_08860 KV814743.1 Protein Homology CDS 92305 92535 . + 0 ID=cds-OFQ19804.1;Parent=gene-HMPREF2948_08860;Dbxref=NCBI_GP:OFQ19804.1;Name=OFQ19804.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005541294.1;locus_tag=HMPREF2948_08860;product=30S ribosomal protein S18;protein_id=OFQ19804.1;transl_table=11 KV814743.1 Genbank gene 92550 92999 . + . ID=gene-HMPREF2948_08865;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=HMPREF2948_08865 KV814743.1 Protein Homology CDS 92550 92999 . + 0 ID=cds-OFQ19805.1;Parent=gene-HMPREF2948_08865;Dbxref=NCBI_GP:OFQ19805.1;Name=OFQ19805.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_004707026.1;locus_tag=HMPREF2948_08865;product=50S ribosomal protein L9;protein_id=OFQ19805.1;transl_table=11 KV814743.1 Genbank gene 93150 93494 . - . ID=gene-HMPREF2948_08870;Name=HMPREF2948_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08870 KV814743.1 Protein Homology CDS 93150 93494 . - 0 ID=cds-OFQ19806.1;Parent=gene-HMPREF2948_08870;Dbxref=NCBI_GP:OFQ19806.1;Name=OFQ19806.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q65RZ8.1;locus_tag=HMPREF2948_08870;product=fumarate reductase;protein_id=OFQ19806.1;transl_table=11 KV814743.1 Genbank gene 93506 93916 . - . ID=gene-HMPREF2948_08875;Name=HMPREF2948_08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08875 KV814743.1 Protein Homology CDS 93506 93916 . - 0 ID=cds-OFQ19807.1;Parent=gene-HMPREF2948_08875;Dbxref=NCBI_GP:OFQ19807.1;Name=OFQ19807.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701880.1;locus_tag=HMPREF2948_08875;product=fumarate reductase subunit C;protein_id=OFQ19807.1;transl_table=11 KV814743.1 Genbank gene 93927 94697 . - . ID=gene-HMPREF2948_08880;Name=HMPREF2948_08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08880 KV814743.1 Protein Homology CDS 93927 94697 . - 0 ID=cds-OFQ19808.1;Parent=gene-HMPREF2948_08880;Dbxref=NCBI_GP:OFQ19808.1;Name=OFQ19808.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44893.1;locus_tag=HMPREF2948_08880;product=fumarate reductase;protein_id=OFQ19808.1;transl_table=11 KV814743.1 Genbank gene 94690 96489 . - . ID=gene-HMPREF2948_08885;Name=HMPREF2948_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08885 KV814743.1 Protein Homology CDS 94690 96489 . - 0 ID=cds-OFQ19809.1;Parent=gene-HMPREF2948_08885;Dbxref=NCBI_GP:OFQ19809.1;Name=OFQ19809.1;Note=part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699801.1;locus_tag=HMPREF2948_08885;product=succinate dehydrogenase flavoprotein subunit;protein_id=OFQ19809.1;transl_table=11 KV814743.1 Genbank gene 96769 97752 . + . ID=gene-HMPREF2948_08890;Name=HMPREF2948_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08890 KV814743.1 Protein Homology CDS 96769 97752 . + 0 ID=cds-OFQ19810.1;Parent=gene-HMPREF2948_08890;Dbxref=NCBI_GP:OFQ19810.1;Name=OFQ19810.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013746763.1;locus_tag=HMPREF2948_08890;product=elongation factor P--(R)-beta-lysine ligase;protein_id=OFQ19810.1;transl_table=11 KV814743.1 Genbank gene 97944 99002 . + . ID=gene-HMPREF2948_08895;Name=HMPREF2948_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08895 KV814743.1 Protein Homology CDS 97944 99002 . + 0 ID=cds-OFQ19811.1;Parent=gene-HMPREF2948_08895;Dbxref=NCBI_GP:OFQ19811.1;Name=OFQ19811.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823281.1;locus_tag=HMPREF2948_08895;product=hypothetical protein;protein_id=OFQ19811.1;transl_table=11 KV814743.1 Genbank gene 99241 100212 . - . ID=gene-HMPREF2948_08900;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=HMPREF2948_08900 KV814743.1 Protein Homology CDS 99241 100212 . - 0 ID=cds-OFQ19812.1;Parent=gene-HMPREF2948_08900;Dbxref=NCBI_GP:OFQ19812.1;Name=OFQ19812.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065681.1;locus_tag=HMPREF2948_08900;product=ferrochelatase;protein_id=OFQ19812.1;transl_table=11 KV814743.1 Genbank gene 100209 100628 . - . ID=gene-HMPREF2948_08905;Name=HMPREF2948_08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08905 KV814743.1 Protein Homology CDS 100209 100628 . - 0 ID=cds-OFQ19813.1;Parent=gene-HMPREF2948_08905;Dbxref=NCBI_GP:OFQ19813.1;Name=OFQ19813.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014065680.1;locus_tag=HMPREF2948_08905;product=esterase;protein_id=OFQ19813.1;transl_table=11 KV814743.1 Genbank gene 100862 102232 . + . ID=gene-HMPREF2948_08910;Name=HMPREF2948_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08910 KV814743.1 Protein Homology CDS 100862 102232 . + 0 ID=cds-OFQ19814.1;Parent=gene-HMPREF2948_08910;Dbxref=NCBI_GP:OFQ19814.1;Name=OFQ19814.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823002.1;locus_tag=HMPREF2948_08910;product=glutathione-disulfide reductase;protein_id=OFQ19814.1;transl_table=11 KV814743.1 Genbank gene 102302 103129 . - . ID=gene-HMPREF2948_08915;Name=HMPREF2948_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08915 KV814743.1 Protein Homology CDS 102302 103129 . - 0 ID=cds-OFQ19815.1;Parent=gene-HMPREF2948_08915;Dbxref=NCBI_GP:OFQ19815.1;Name=OFQ19815.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698710.1;locus_tag=HMPREF2948_08915;product=class II glutamine amidotransferase;protein_id=OFQ19815.1;transl_table=11 KV814743.1 Genbank gene 103350 104666 . - . ID=gene-HMPREF2948_08920;Name=HMPREF2948_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08920 KV814743.1 Protein Homology CDS 103350 104666 . - 0 ID=cds-OFQ19816.1;Parent=gene-HMPREF2948_08920;Dbxref=NCBI_GP:OFQ19816.1;Name=OFQ19816.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005823613.1;locus_tag=HMPREF2948_08920;product=MFS transporter;protein_id=OFQ19816.1;transl_table=11 KV814743.1 Genbank gene 104681 105388 . - . ID=gene-HMPREF2948_08925;Name=HMPREF2948_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08925 KV814743.1 Protein Homology CDS 104681 105388 . - 0 ID=cds-OFQ19817.1;Parent=gene-HMPREF2948_08925;Dbxref=NCBI_GP:OFQ19817.1;Name=OFQ19817.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064751.1;locus_tag=HMPREF2948_08925;product=hypothetical protein;protein_id=OFQ19817.1;transl_table=11 KV814743.1 Genbank gene 105642 107846 . + . ID=gene-HMPREF2948_08930;Name=HMPREF2948_08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08930 KV814743.1 Protein Homology CDS 105642 107846 . + 0 ID=cds-OFQ19818.1;Parent=gene-HMPREF2948_08930;Dbxref=NCBI_GP:OFQ19818.1;Name=OFQ19818.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064752.1;locus_tag=HMPREF2948_08930;product=outer membrane receptor protein;protein_id=OFQ19818.1;transl_table=11 KV814743.1 Genbank gene 107980 108192 . - . ID=gene-HMPREF2948_08935;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=HMPREF2948_08935 KV814743.1 Protein Homology CDS 107980 108192 . - 0 ID=cds-OFQ19819.1;Parent=gene-HMPREF2948_08935;Dbxref=NCBI_GP:OFQ19819.1;Name=OFQ19819.1;Note=RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome;gbkey=CDS;gene=rpmE;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007524365.1;locus_tag=HMPREF2948_08935;product=50S ribosomal protein L31;protein_id=OFQ19819.1;transl_table=11 KV814743.1 Genbank gene 108385 109503 . + . ID=gene-HMPREF2948_08940;Name=HMPREF2948_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08940 KV814743.1 Protein Homology CDS 108385 109503 . + 0 ID=cds-OFQ19820.1;Parent=gene-HMPREF2948_08940;Dbxref=NCBI_GP:OFQ19820.1;Name=OFQ19820.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44320.1;locus_tag=HMPREF2948_08940;product=A/G-specific adenine glycosylase;protein_id=OFQ19820.1;transl_table=11 KV814743.1 Genbank gene 109496 109768 . + . ID=gene-HMPREF2948_08945;Name=HMPREF2948_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08945 KV814743.1 Protein Homology CDS 109496 109768 . + 0 ID=cds-OFQ19821.1;Parent=gene-HMPREF2948_08945;Dbxref=NCBI_GP:OFQ19821.1;Name=OFQ19821.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696845.1;locus_tag=HMPREF2948_08945;product=Fe(2+)-trafficking protein;protein_id=OFQ19821.1;transl_table=11 KV814743.1 Genbank gene 109778 110857 . + . ID=gene-HMPREF2948_08950;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=HMPREF2948_08950 KV814743.1 Protein Homology CDS 109778 110857 . + 0 ID=cds-OFQ19822.1;Parent=gene-HMPREF2948_08950;Dbxref=NCBI_GP:OFQ19822.1;Name=OFQ19822.1;Note=Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues;gbkey=CDS;gene=mltC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696844.1;locus_tag=HMPREF2948_08950;product=lytic murein transglycosylase;protein_id=OFQ19822.1;transl_table=11 KV814743.1 Genbank gene 111086 111161 . + . ID=gene-HMPREF2948_08955;Name=HMPREF2948_08955;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08955 KV814743.1 tRNAscan-SE tRNA 111086 111161 . + . ID=rna-HMPREF2948_08955;Parent=gene-HMPREF2948_08955;anticodon=(pos:111119..111121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08955;product=tRNA-Phe KV814743.1 tRNAscan-SE exon 111086 111161 . + . ID=exon-HMPREF2948_08955-1;Parent=rna-HMPREF2948_08955;anticodon=(pos:111119..111121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08955;product=tRNA-Phe KV814743.1 Genbank gene 111164 111239 . + . ID=gene-HMPREF2948_08960;Name=HMPREF2948_08960;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_08960 KV814743.1 tRNAscan-SE tRNA 111164 111239 . + . ID=rna-HMPREF2948_08960;Parent=gene-HMPREF2948_08960;anticodon=(pos:111197..111199);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08960;product=tRNA-Asn KV814743.1 tRNAscan-SE exon 111164 111239 . + . ID=exon-HMPREF2948_08960-1;Parent=rna-HMPREF2948_08960;anticodon=(pos:111197..111199);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_08960;product=tRNA-Asn KV814743.1 Genbank gene 111528 112766 . + . ID=gene-HMPREF2948_08965;Name=HMPREF2948_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08965 KV814743.1 Protein Homology CDS 111528 112766 . + 0 ID=cds-OFQ19823.1;Parent=gene-HMPREF2948_08965;Dbxref=NCBI_GP:OFQ19823.1;Name=OFQ19823.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005666700.1;locus_tag=HMPREF2948_08965;product=serine transporter;protein_id=OFQ19823.1;transl_table=11 KV814743.1 Genbank gene 112802 114172 . + . ID=gene-HMPREF2948_08970;Name=HMPREF2948_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08970 KV814743.1 Protein Homology CDS 112802 114172 . + 0 ID=cds-OFQ19824.1;Parent=gene-HMPREF2948_08970;Dbxref=NCBI_GP:OFQ19824.1;Name=OFQ19824.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355351.1;locus_tag=HMPREF2948_08970;product=L-serine ammonia-lyase;protein_id=OFQ19824.1;transl_table=11 KV814743.1 Genbank gene 114218 115309 . - . ID=gene-HMPREF2948_08975;Name=HMPREF2948_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08975 KV814743.1 Protein Homology CDS 114218 115309 . - 0 ID=cds-OFQ19825.1;Parent=gene-HMPREF2948_08975;Dbxref=NCBI_GP:OFQ19825.1;Name=OFQ19825.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005824532.1;locus_tag=HMPREF2948_08975;product=metallophosphoesterase;protein_id=OFQ19825.1;transl_table=11 KV814743.1 Genbank gene 115445 115774 . + . ID=gene-HMPREF2948_08980;Name=HMPREF2948_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08980 KV814743.1 Protein Homology CDS 115445 115774 . + 0 ID=cds-OFQ19826.1;Parent=gene-HMPREF2948_08980;Dbxref=NCBI_GP:OFQ19826.1;Name=OFQ19826.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=HMPREF2948_08980;product=hypothetical protein;protein_id=OFQ19826.1;transl_table=11 KV814743.1 Genbank gene 115836 116438 . + . ID=gene-HMPREF2948_08985;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=HMPREF2948_08985 KV814743.1 Protein Homology CDS 115836 116438 . + 0 ID=cds-OFQ19827.1;Parent=gene-HMPREF2948_08985;Dbxref=NCBI_GP:OFQ19827.1;Name=OFQ19827.1;Note=involved in a recombinational process of DNA repair%2C independent of the recBC complex;gbkey=CDS;gene=recR;inference=EXISTENCE: similar to AA sequence:SwissProt:P44712.1;locus_tag=HMPREF2948_08985;product=recombination protein RecR;protein_id=OFQ19827.1;transl_table=11 KV814743.1 Genbank gene 116443 118386 . + . ID=gene-HMPREF2948_08990;Name=HMPREF2948_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08990 KV814743.1 Protein Homology CDS 116443 118386 . + 0 ID=cds-OFQ19828.1;Parent=gene-HMPREF2948_08990;Dbxref=NCBI_GP:OFQ19828.1;Name=OFQ19828.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064795.1;locus_tag=HMPREF2948_08990;product=DNA topoisomerase III;protein_id=OFQ19828.1;transl_table=11 KV814743.1 Genbank gene 118503 118850 . + . ID=gene-HMPREF2948_08995;Name=HMPREF2948_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_08995 KV814743.1 Protein Homology CDS 118503 118850 . + 0 ID=cds-OFQ19829.1;Parent=gene-HMPREF2948_08995;Dbxref=NCBI_GP:OFQ19829.1;Name=OFQ19829.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199908.1;locus_tag=HMPREF2948_08995;product=preprotein translocase subunit SecG;protein_id=OFQ19829.1;transl_table=11 KV814743.1 Genbank gene 118871 118956 . + . ID=gene-HMPREF2948_09000;Name=HMPREF2948_09000;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09000 KV814743.1 tRNAscan-SE tRNA 118871 118956 . + . ID=rna-HMPREF2948_09000;Parent=gene-HMPREF2948_09000;anticodon=(pos:118905..118907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09000;product=tRNA-Leu KV814743.1 tRNAscan-SE exon 118871 118956 . + . ID=exon-HMPREF2948_09000-1;Parent=rna-HMPREF2948_09000;anticodon=(pos:118905..118907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09000;product=tRNA-Leu KV814743.1 Genbank gene 119085 120506 . + . ID=gene-HMPREF2948_09005;Name=HMPREF2948_09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09005 KV814743.1 Protein Homology CDS 119085 120506 . + 0 ID=cds-OFQ19830.1;Parent=gene-HMPREF2948_09005;Dbxref=NCBI_GP:OFQ19830.1;Name=OFQ19830.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698676.1;locus_tag=HMPREF2948_09005;product=PTS maltose transporter subunit IIBC;protein_id=OFQ19830.1;transl_table=11 KV814743.1 Genbank gene 120597 121064 . - . ID=gene-HMPREF2948_09010;Name=HMPREF2948_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09010 KV814743.1 Protein Homology CDS 120597 121064 . - 0 ID=cds-OFQ19831.1;Parent=gene-HMPREF2948_09010;Dbxref=NCBI_GP:OFQ19831.1;Name=OFQ19831.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007526244.1;locus_tag=HMPREF2948_09010;product=hypothetical protein;protein_id=OFQ19831.1;transl_table=11 KV814743.1 Genbank gene 121314 122516 . + . ID=gene-HMPREF2948_09015;Name=HMPREF2948_09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09015 KV814743.1 Protein Homology CDS 121314 122516 . + 0 ID=cds-OFQ19832.1;Parent=gene-HMPREF2948_09015;Dbxref=NCBI_GP:OFQ19832.1;Name=OFQ19832.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693372.1;locus_tag=HMPREF2948_09015;product=hypothetical protein;protein_id=OFQ19832.1;transl_table=11 KV814743.1 Genbank gene 122610 123722 . - . ID=gene-HMPREF2948_09020;Name=HMPREF2948_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09020 KV814743.1 GeneMarkS+ CDS 122610 123722 . - 0 ID=cds-OFQ19833.1;Parent=gene-HMPREF2948_09020;Dbxref=NCBI_GP:OFQ19833.1;Name=OFQ19833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09020;product=hypothetical protein;protein_id=OFQ19833.1;transl_table=11 KV814743.1 Genbank gene 123815 127507 . - . ID=gene-HMPREF2948_09025;Name=HMPREF2948_09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09025 KV814743.1 Protein Homology CDS 123815 127507 . - 0 ID=cds-OFQ19834.1;Parent=gene-HMPREF2948_09025;Dbxref=NCBI_GP:OFQ19834.1;Name=OFQ19834.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064802.1;locus_tag=HMPREF2948_09025;product=methionine synthase;protein_id=OFQ19834.1;transl_table=11 KV814743.1 Genbank gene 127682 128284 . - . ID=gene-HMPREF2948_09030;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=HMPREF2948_09030 KV814743.1 Protein Homology CDS 127682 128284 . - 0 ID=cds-OFQ19835.1;Parent=gene-HMPREF2948_09030;Dbxref=NCBI_GP:OFQ19835.1;Name=OFQ19835.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693330.1;locus_tag=HMPREF2948_09030;product=3-isopropylmalate dehydratase small subunit;protein_id=OFQ19835.1;transl_table=11 KV814743.1 Genbank gene 128295 129704 . - . ID=gene-HMPREF2948_09035;Name=HMPREF2948_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09035 KV814743.1 Protein Homology CDS 128295 129704 . - 0 ID=cds-OFQ19836.1;Parent=gene-HMPREF2948_09035;Dbxref=NCBI_GP:OFQ19836.1;Name=OFQ19836.1;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991992.1;locus_tag=HMPREF2948_09035;product=isopropylmalate isomerase;protein_id=OFQ19836.1;transl_table=11 KV814743.1 Genbank gene 129782 130858 . - . ID=gene-HMPREF2948_09040;Name=HMPREF2948_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09040 KV814743.1 Protein Homology CDS 129782 130858 . - 0 ID=cds-OFQ19837.1;Parent=gene-HMPREF2948_09040;Dbxref=NCBI_GP:OFQ19837.1;Name=OFQ19837.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693328.1;locus_tag=HMPREF2948_09040;product=3-isopropylmalate dehydrogenase;protein_id=OFQ19837.1;transl_table=11 KV814743.1 Genbank gene 131034 132581 . - . ID=gene-HMPREF2948_09045;Name=HMPREF2948_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09045 KV814743.1 Protein Homology CDS 131034 132581 . - 0 ID=cds-OFQ19838.1;Parent=gene-HMPREF2948_09045;Dbxref=NCBI_GP:OFQ19838.1;Name=OFQ19838.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005629360.1;locus_tag=HMPREF2948_09045;product=2-isopropylmalate synthase;protein_id=OFQ19838.1;transl_table=11 KV814743.1 Genbank gene 133104 134222 . + . ID=gene-HMPREF2948_09050;Name=HMPREF2948_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09050 KV814743.1 Protein Homology CDS 133104 134222 . + 0 ID=cds-OFQ19839.1;Parent=gene-HMPREF2948_09050;Dbxref=NCBI_GP:OFQ19839.1;Name=OFQ19839.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696822.1;locus_tag=HMPREF2948_09050;product=DNA processing protein DprA;protein_id=OFQ19839.1;transl_table=11 KV814743.1 Genbank gene 134286 135062 . + . ID=gene-HMPREF2948_09055;Name=HMPREF2948_09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09055 KV814743.1 Protein Homology CDS 134286 135062 . + 0 ID=cds-OFQ19840.1;Parent=gene-HMPREF2948_09055;Dbxref=NCBI_GP:OFQ19840.1;Name=OFQ19840.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869102.1;locus_tag=HMPREF2948_09055;product=hypothetical protein;protein_id=OFQ19840.1;transl_table=11 KV814743.1 Genbank gene 135055 135648 . + . ID=gene-HMPREF2948_09060;Name=HMPREF2948_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09060 KV814743.1 Protein Homology CDS 135055 135648 . + 0 ID=cds-OFQ19841.1;Parent=gene-HMPREF2948_09060;Dbxref=NCBI_GP:OFQ19841.1;Name=OFQ19841.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698629.1;locus_tag=HMPREF2948_09060;product=hypothetical protein;protein_id=OFQ19841.1;transl_table=11 KV814743.1 Genbank gene 135759 136724 . + . ID=gene-HMPREF2948_09065;Name=HMPREF2948_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09065 KV814743.1 Protein Homology CDS 135759 136724 . + 0 ID=cds-OFQ19842.1;Parent=gene-HMPREF2948_09065;Dbxref=NCBI_GP:OFQ19842.1;Name=OFQ19842.1;Note=catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719197.1;locus_tag=HMPREF2948_09065;product=ATP-dependent 6-phosphofructokinase;protein_id=OFQ19842.1;transl_table=11 KV814743.1 Genbank gene 136802 137302 . - . ID=gene-HMPREF2948_09070;Name=HMPREF2948_09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09070 KV814743.1 Protein Homology CDS 136802 137302 . - 0 ID=cds-OFQ19843.1;Parent=gene-HMPREF2948_09070;Dbxref=NCBI_GP:OFQ19843.1;Name=OFQ19843.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698719.1;locus_tag=HMPREF2948_09070;product=dihydrofolate reductase;protein_id=OFQ19843.1;transl_table=11 KV814743.1 Genbank gene 137444 138553 . + . ID=gene-HMPREF2948_09075;Name=HMPREF2948_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09075 KV814743.1 Protein Homology CDS 137444 138553 . + 0 ID=cds-OFQ19844.1;Parent=gene-HMPREF2948_09075;Dbxref=NCBI_GP:OFQ19844.1;Name=OFQ19844.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005719361.1;locus_tag=HMPREF2948_09075;product=glutamate 5-kinase;protein_id=OFQ19844.1;transl_table=11 KV814743.1 Genbank pseudogene 138666 139044 . + . ID=gene-HMPREF2948_09080;Name=HMPREF2948_09080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_09080;pseudo=true KV814743.1 Protein Homology CDS 138666 139044 . + 0 ID=cds-HMPREF2948_09080;Parent=gene-HMPREF2948_09080;Note=frameshifted;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064812.1;locus_tag=HMPREF2948_09080;product=hypothetical protein;pseudo=true;transl_table=11 KV814743.1 Genbank gene 139080 139712 . - . ID=gene-HMPREF2948_09085;Name=HMPREF2948_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09085 KV814743.1 Protein Homology CDS 139080 139712 . - 0 ID=cds-OFQ19845.1;Parent=gene-HMPREF2948_09085;Dbxref=NCBI_GP:OFQ19845.1;Name=OFQ19845.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005547705.1;locus_tag=HMPREF2948_09085;product=peptidylprolyl isomerase;protein_id=OFQ19845.1;transl_table=11 KV814743.1 Genbank gene 139734 140603 . - . ID=gene-HMPREF2948_09090;Name=HMPREF2948_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09090 KV814743.1 Protein Homology CDS 139734 140603 . - 0 ID=cds-OFQ19846.1;Parent=gene-HMPREF2948_09090;Dbxref=NCBI_GP:OFQ19846.1;Name=OFQ19846.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005658144.1;locus_tag=HMPREF2948_09090;product=phosphatidylserine decarboxylase;protein_id=OFQ19846.1;transl_table=11 KV814743.1 Genbank gene 140729 142096 . - . ID=gene-HMPREF2948_09095;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=HMPREF2948_09095 KV814743.1 Protein Homology CDS 140729 142096 . - 0 ID=cds-OFQ19847.1;Parent=gene-HMPREF2948_09095;Dbxref=NCBI_GP:OFQ19847.1;Name=OFQ19847.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064815.1;locus_tag=HMPREF2948_09095;product=phosphatidylserine synthase;protein_id=OFQ19847.1;transl_table=11 KV814743.1 Genbank gene 142246 143319 . + . ID=gene-HMPREF2948_09100;Name=HMPREF2948_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09100 KV814743.1 Protein Homology CDS 142246 143319 . + 0 ID=cds-OFQ19848.1;Parent=gene-HMPREF2948_09100;Dbxref=NCBI_GP:OFQ19848.1;Name=OFQ19848.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500864.1;locus_tag=HMPREF2948_09100;product=rRNA methyltransferase;protein_id=OFQ19848.1;transl_table=11 KV814743.1 Genbank gene 143488 145377 . + . ID=gene-HMPREF2948_09105;Name=HMPREF2948_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09105 KV814743.1 Protein Homology CDS 143488 145377 . + 0 ID=cds-OFQ19849.1;Parent=gene-HMPREF2948_09105;Dbxref=NCBI_GP:OFQ19849.1;Name=OFQ19849.1;Note=catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006719782.1;locus_tag=HMPREF2948_09105;product=glutathionylspermidine synthase;protein_id=OFQ19849.1;transl_table=11 KV814743.1 Genbank gene 145432 146070 . - . ID=gene-HMPREF2948_09110;Name=HMPREF2948_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09110 KV814743.1 Protein Homology CDS 145432 146070 . - 0 ID=cds-OFQ19850.1;Parent=gene-HMPREF2948_09110;Dbxref=NCBI_GP:OFQ19850.1;Name=OFQ19850.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_007525868.1;locus_tag=HMPREF2948_09110;product=cytochrome C;protein_id=OFQ19850.1;transl_table=11 KV814743.1 Genbank gene 146082 146510 . - . ID=gene-HMPREF2948_09115;Name=HMPREF2948_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09115 KV814743.1 Protein Homology CDS 146082 146510 . - 0 ID=cds-OFQ19851.1;Parent=gene-HMPREF2948_09115;Dbxref=NCBI_GP:OFQ19851.1;Name=OFQ19851.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652475.1;locus_tag=HMPREF2948_09115;product=nitrate reductase;protein_id=OFQ19851.1;transl_table=11 KV814743.1 Genbank gene 146532 147428 . - . ID=gene-HMPREF2948_09120;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=HMPREF2948_09120 KV814743.1 Protein Homology CDS 146532 147428 . - 0 ID=cds-OFQ19852.1;Parent=gene-HMPREF2948_09120;Dbxref=NCBI_GP:OFQ19852.1;Name=OFQ19852.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005707057.1;locus_tag=HMPREF2948_09120;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=OFQ19852.1;transl_table=11 KV814743.1 Genbank gene 147428 148333 . - . ID=gene-HMPREF2948_09125;Name=HMPREF2948_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09125 KV814743.1 Protein Homology CDS 147428 148333 . - 0 ID=cds-OFQ19853.1;Parent=gene-HMPREF2948_09125;Dbxref=NCBI_GP:OFQ19853.1;Name=OFQ19853.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652473.1;locus_tag=HMPREF2948_09125;product=quinol dehydrogenase;protein_id=OFQ19853.1;transl_table=11 KV814743.1 Genbank gene 148405 150891 . - . ID=gene-HMPREF2948_09130;Name=HMPREF2948_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09130 KV814743.1 Protein Homology CDS 148405 150891 . - 0 ID=cds-OFQ19854.1;Parent=gene-HMPREF2948_09130;Dbxref=NCBI_GP:OFQ19854.1;Name=OFQ19854.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018652472.1;locus_tag=HMPREF2948_09130;product=nitrate reductase;protein_id=OFQ19854.1;transl_table=11 KV814743.1 Genbank gene 150955 151218 . - . ID=gene-HMPREF2948_09135;Name=HMPREF2948_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09135 KV814743.1 Protein Homology CDS 150955 151218 . - 0 ID=cds-OFQ19855.1;Parent=gene-HMPREF2948_09135;Dbxref=NCBI_GP:OFQ19855.1;Name=OFQ19855.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698684.1;locus_tag=HMPREF2948_09135;product=reductase;protein_id=OFQ19855.1;transl_table=11 KV814743.1 Genbank gene 151205 151747 . - . ID=gene-HMPREF2948_09140;Name=HMPREF2948_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09140 KV814743.1 Protein Homology CDS 151205 151747 . - 0 ID=cds-OFQ19856.1;Parent=gene-HMPREF2948_09140;Dbxref=NCBI_GP:OFQ19856.1;Name=OFQ19856.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698616.1;locus_tag=HMPREF2948_09140;product=ferredoxin-type protein NapF;protein_id=OFQ19856.1;transl_table=11 KV814743.1 Genbank gene 151970 152317 . - . ID=gene-HMPREF2948_09145;Name=HMPREF2948_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09145 KV814743.1 Protein Homology CDS 151970 152317 . - 0 ID=cds-OFQ19857.1;Parent=gene-HMPREF2948_09145;Dbxref=NCBI_GP:OFQ19857.1;Name=OFQ19857.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005717803.1;locus_tag=HMPREF2948_09145;product=hypothetical protein;protein_id=OFQ19857.1;transl_table=11 KV814743.1 Genbank gene 152363 153109 . - . ID=gene-HMPREF2948_09150;Name=HMPREF2948_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09150 KV814743.1 Protein Homology CDS 152363 153109 . - 0 ID=cds-OFQ19858.1;Parent=gene-HMPREF2948_09150;Dbxref=NCBI_GP:OFQ19858.1;Name=OFQ19858.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694335.1;locus_tag=HMPREF2948_09150;product=tRNA (guanine-N7)-methyltransferase;protein_id=OFQ19858.1;transl_table=11 KV814743.1 Genbank gene 153223 155412 . + . ID=gene-HMPREF2948_09155;Name=HMPREF2948_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09155 KV814743.1 Protein Homology CDS 153223 155412 . + 0 ID=cds-OFQ19859.1;Parent=gene-HMPREF2948_09155;Dbxref=NCBI_GP:OFQ19859.1;Name=OFQ19859.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701582.1;locus_tag=HMPREF2948_09155;product=primosomal protein N';protein_id=OFQ19859.1;transl_table=11 KV814743.1 Genbank gene 155506 156390 . + . ID=gene-HMPREF2948_09160;Name=HMPREF2948_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09160 KV814743.1 Protein Homology CDS 155506 156390 . + 0 ID=cds-OFQ19860.1;Parent=gene-HMPREF2948_09160;Dbxref=NCBI_GP:OFQ19860.1;Name=OFQ19860.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005686142.1;locus_tag=HMPREF2948_09160;product=cell division protein FtsN;protein_id=OFQ19860.1;transl_table=11 KV814743.1 Genbank gene 156548 157126 . + . ID=gene-HMPREF2948_09165;Name=HMPREF2948_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09165 KV814743.1 Protein Homology CDS 156548 157126 . + 0 ID=cds-OFQ19861.1;Parent=gene-HMPREF2948_09165;Dbxref=NCBI_GP:OFQ19861.1;Name=OFQ19861.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625983.1;locus_tag=HMPREF2948_09165;product=TetR family transcriptional regulator;protein_id=OFQ19861.1;transl_table=11 KV814743.1 Genbank gene 157157 158362 . + . ID=gene-HMPREF2948_09170;Name=HMPREF2948_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09170 KV814743.1 Protein Homology CDS 157157 158362 . + 0 ID=cds-OFQ19862.1;Parent=gene-HMPREF2948_09170;Dbxref=NCBI_GP:OFQ19862.1;Name=OFQ19862.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005555480.1;locus_tag=HMPREF2948_09170;product=efflux transporter periplasmic adaptor subunit;protein_id=OFQ19862.1;transl_table=11 KV814743.1 Genbank gene 158376 161480 . + . ID=gene-HMPREF2948_09175;Name=HMPREF2948_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09175 KV814743.1 Protein Homology CDS 158376 161480 . + 0 ID=cds-OFQ19863.1;Parent=gene-HMPREF2948_09175;Dbxref=NCBI_GP:OFQ19863.1;Name=OFQ19863.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064828.1;locus_tag=HMPREF2948_09175;product=transporter;protein_id=OFQ19863.1;transl_table=11 KV814743.1 Genbank gene 161609 162388 . - . ID=gene-HMPREF2948_09180;Name=HMPREF2948_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09180 KV814743.1 Protein Homology CDS 161609 162388 . - 0 ID=cds-OFQ19864.1;Parent=gene-HMPREF2948_09180;Dbxref=NCBI_GP:OFQ19864.1;Name=OFQ19864.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009499734.1;locus_tag=HMPREF2948_09180;product=deoxyribonuclease HsdR;protein_id=OFQ19864.1;transl_table=11 KV814743.1 Genbank gene 162510 163766 . + . ID=gene-HMPREF2948_09185;Name=HMPREF2948_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09185 KV814743.1 Protein Homology CDS 162510 163766 . + 0 ID=cds-OFQ19865.1;Parent=gene-HMPREF2948_09185;Dbxref=NCBI_GP:OFQ19865.1;Name=OFQ19865.1;Note=tryptophan transporter of high affinity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694021.1;locus_tag=HMPREF2948_09185;product=tryptophan permease;protein_id=OFQ19865.1;transl_table=11 KV814743.1 Genbank gene 163832 164605 . + . ID=gene-HMPREF2948_09190;Name=HMPREF2948_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09190 KV814743.1 Protein Homology CDS 163832 164605 . + 0 ID=cds-OFQ19866.1;Parent=gene-HMPREF2948_09190;Dbxref=NCBI_GP:OFQ19866.1;Name=OFQ19866.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699838.1;locus_tag=HMPREF2948_09190;product=hypothetical protein;protein_id=OFQ19866.1;transl_table=11 KV814743.1 Genbank gene 164775 165497 . + . ID=gene-HMPREF2948_09195;Name=HMPREF2948_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09195 KV814743.1 Protein Homology CDS 164775 165497 . + 0 ID=cds-OFQ19867.1;Parent=gene-HMPREF2948_09195;Dbxref=NCBI_GP:OFQ19867.1;Name=OFQ19867.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I458.1;locus_tag=HMPREF2948_09195;product=30S ribosomal protein S2;protein_id=OFQ19867.1;transl_table=11 KV814743.1 Genbank gene 165631 166482 . + . ID=gene-HMPREF2948_09200;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=HMPREF2948_09200 KV814743.1 Protein Homology CDS 165631 166482 . + 0 ID=cds-OFQ19868.1;Parent=gene-HMPREF2948_09200;Dbxref=NCBI_GP:OFQ19868.1;Name=OFQ19868.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693261.1;locus_tag=HMPREF2948_09200;product=elongation factor Ts;protein_id=OFQ19868.1;transl_table=11 KV814743.1 Genbank gene 166557 168116 . - . ID=gene-HMPREF2948_09205;Name=HMPREF2948_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09205 KV814743.1 Protein Homology CDS 166557 168116 . - 0 ID=cds-OFQ19869.1;Parent=gene-HMPREF2948_09205;Dbxref=NCBI_GP:OFQ19869.1;Name=OFQ19869.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699840.1;locus_tag=HMPREF2948_09205;product=hypothetical protein;protein_id=OFQ19869.1;transl_table=11 KV814743.1 Genbank gene 168242 168955 . + . ID=gene-HMPREF2948_09210;Name=HMPREF2948_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09210 KV814743.1 Protein Homology CDS 168242 168955 . + 0 ID=cds-OFQ19870.1;Parent=gene-HMPREF2948_09210;Dbxref=NCBI_GP:OFQ19870.1;Name=OFQ19870.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005711225.1;locus_tag=HMPREF2948_09210;product=UMP kinase;protein_id=OFQ19870.1;transl_table=11 KV814743.1 Genbank gene 169079 169636 . + . ID=gene-HMPREF2948_09215;Name=HMPREF2948_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09215 KV814743.1 Protein Homology CDS 169079 169636 . + 0 ID=cds-OFQ19871.1;Parent=gene-HMPREF2948_09215;Dbxref=NCBI_GP:OFQ19871.1;Name=OFQ19871.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014991577.1;locus_tag=HMPREF2948_09215;product=ribosome recycling factor;protein_id=OFQ19871.1;transl_table=11 KV814743.1 Genbank gene 169726 170925 . + . ID=gene-HMPREF2948_09220;Name=HMPREF2948_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09220 KV814743.1 Protein Homology CDS 169726 170925 . + 0 ID=cds-OFQ19872.1;Parent=gene-HMPREF2948_09220;Dbxref=NCBI_GP:OFQ19872.1;Name=OFQ19872.1;Note=catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064837.1;locus_tag=HMPREF2948_09220;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=OFQ19872.1;transl_table=11 KV814743.1 Genbank gene 170966 171685 . + . ID=gene-HMPREF2948_09225;Name=HMPREF2948_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09225 KV814743.1 Protein Homology CDS 170966 171685 . + 0 ID=cds-OFQ19873.1;Parent=gene-HMPREF2948_09225;Dbxref=NCBI_GP:OFQ19873.1;Name=OFQ19873.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006716867.1;locus_tag=HMPREF2948_09225;product=di-trans%2Cpoly-cis-decaprenylcistransferase;protein_id=OFQ19873.1;transl_table=11 KV814743.1 Genbank gene 171697 172563 . + . ID=gene-HMPREF2948_09230;Name=HMPREF2948_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09230 KV814743.1 Protein Homology CDS 171697 172563 . + 0 ID=cds-OFQ19874.1;Parent=gene-HMPREF2948_09230;Dbxref=NCBI_GP:OFQ19874.1;Name=OFQ19874.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005663617.1;locus_tag=HMPREF2948_09230;product=phosphatidate cytidylyltransferase;protein_id=OFQ19874.1;transl_table=11 KV814743.1 Genbank gene 172572 173903 . + . ID=gene-HMPREF2948_09235;Name=HMPREF2948_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09235 KV814743.1 Protein Homology CDS 172572 173903 . + 0 ID=cds-OFQ19875.1;Parent=gene-HMPREF2948_09235;Dbxref=NCBI_GP:OFQ19875.1;Name=OFQ19875.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012055296.1;locus_tag=HMPREF2948_09235;product=zinc metallopeptidase RseP;protein_id=OFQ19875.1;transl_table=11 KV814743.1 Genbank gene 173930 176308 . + . ID=gene-HMPREF2948_09240;Name=HMPREF2948_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09240 KV814743.1 Protein Homology CDS 173930 176308 . + 0 ID=cds-OFQ19876.1;Parent=gene-HMPREF2948_09240;Dbxref=NCBI_GP:OFQ19876.1;Name=OFQ19876.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005640164.1;locus_tag=HMPREF2948_09240;product=outer membrane protein assembly factor BamA;protein_id=OFQ19876.1;transl_table=11 KV814743.1 Genbank gene 176412 177020 . + . ID=gene-HMPREF2948_09245;Name=HMPREF2948_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09245 KV814743.1 Protein Homology CDS 176412 177020 . + 0 ID=cds-OFQ19877.1;Parent=gene-HMPREF2948_09245;Dbxref=NCBI_GP:OFQ19877.1;Name=OFQ19877.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005690567.1;locus_tag=HMPREF2948_09245;product=hypothetical protein;protein_id=OFQ19877.1;transl_table=11 KV814743.1 Genbank gene 177033 178058 . + . ID=gene-HMPREF2948_09250;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=HMPREF2948_09250 KV814743.1 Protein Homology CDS 177033 178058 . + 0 ID=cds-OFQ19878.1;Parent=gene-HMPREF2948_09250;Dbxref=NCBI_GP:OFQ19878.1;Name=OFQ19878.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064843.1;locus_tag=HMPREF2948_09250;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=OFQ19878.1;transl_table=11 KV814743.1 Genbank gene 178199 178603 . + . ID=gene-HMPREF2948_09255;Name=HMPREF2948_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09255 KV814743.1 Protein Homology CDS 178199 178603 . + 0 ID=cds-OFQ19966.1;Parent=gene-HMPREF2948_09255;Dbxref=NCBI_GP:OFQ19966.1;Name=OFQ19966.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005540417.1;locus_tag=HMPREF2948_09255;product=beta-hydroxyacyl-ACP dehydratase;protein_id=OFQ19966.1;transl_table=11 KV814743.1 Genbank gene 178627 179415 . + . ID=gene-HMPREF2948_09260;Name=HMPREF2948_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09260 KV814743.1 Protein Homology CDS 178627 179415 . + 0 ID=cds-OFQ19879.1;Parent=gene-HMPREF2948_09260;Dbxref=NCBI_GP:OFQ19879.1;Name=OFQ19879.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005763228.1;locus_tag=HMPREF2948_09260;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=OFQ19879.1;transl_table=11 KV814743.1 Genbank gene 179511 180680 . + . ID=gene-HMPREF2948_09265;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=HMPREF2948_09265 KV814743.1 Protein Homology CDS 179511 180680 . + 0 ID=cds-OFQ19880.1;Parent=gene-HMPREF2948_09265;Dbxref=NCBI_GP:OFQ19880.1;Name=OFQ19880.1;Note=catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM;gbkey=CDS;gene=lpxB;inference=EXISTENCE: similar to AA sequence:SwissProt:P45011.2;locus_tag=HMPREF2948_09265;product=lipid-A-disaccharide synthase;protein_id=OFQ19880.1;transl_table=11 KV814743.1 Genbank gene 180673 181275 . + . ID=gene-HMPREF2948_09270;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=HMPREF2948_09270 KV814743.1 Protein Homology CDS 180673 181275 . + 0 ID=cds-OFQ19881.1;Parent=gene-HMPREF2948_09270;Dbxref=NCBI_GP:OFQ19881.1;Name=OFQ19881.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698648.1;locus_tag=HMPREF2948_09270;product=ribonuclease HII;protein_id=OFQ19881.1;transl_table=11 KV814743.1 Genbank gene 181438 181926 . + . ID=gene-HMPREF2948_09275;Name=HMPREF2948_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09275 KV814743.1 GeneMarkS+ CDS 181438 181926 . + 0 ID=cds-OFQ19882.1;Parent=gene-HMPREF2948_09275;Dbxref=NCBI_GP:OFQ19882.1;Name=OFQ19882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09275;product=hypothetical protein;protein_id=OFQ19882.1;transl_table=11 KV814743.1 Genbank gene 182218 182427 . + . ID=gene-HMPREF2948_09280;Name=HMPREF2948_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09280 KV814743.1 GeneMarkS+ CDS 182218 182427 . + 0 ID=cds-OFQ19883.1;Parent=gene-HMPREF2948_09280;Dbxref=NCBI_GP:OFQ19883.1;Name=OFQ19883.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09280;product=hypothetical protein;protein_id=OFQ19883.1;transl_table=11 KV814743.1 Genbank gene 182424 183185 . + . ID=gene-HMPREF2948_09285;Name=HMPREF2948_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09285 KV814743.1 GeneMarkS+ CDS 182424 183185 . + 0 ID=cds-OFQ19884.1;Parent=gene-HMPREF2948_09285;Dbxref=NCBI_GP:OFQ19884.1;Name=OFQ19884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09285;product=hypothetical protein;protein_id=OFQ19884.1;transl_table=11 KV814743.1 Genbank gene 183263 184681 . - . ID=gene-HMPREF2948_09290;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=HMPREF2948_09290 KV814743.1 Protein Homology CDS 183263 184681 . - 0 ID=cds-OFQ19885.1;Parent=gene-HMPREF2948_09290;Dbxref=NCBI_GP:OFQ19885.1;Name=OFQ19885.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698683.1;locus_tag=HMPREF2948_09290;product=aspartate ammonia-lyase;protein_id=OFQ19885.1;transl_table=11 KV814743.1 Genbank gene 184842 185654 . - . ID=gene-HMPREF2948_09295;Name=HMPREF2948_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09295 KV814743.1 Protein Homology CDS 184842 185654 . - 0 ID=cds-OFQ19886.1;Parent=gene-HMPREF2948_09295;Dbxref=NCBI_GP:OFQ19886.1;Name=OFQ19886.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005635756.1;locus_tag=HMPREF2948_09295;product=urease accessory protein UreD;protein_id=OFQ19886.1;transl_table=11 KV814743.1 Genbank gene 185714 186349 . - . ID=gene-HMPREF2948_09300;Name=HMPREF2948_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09300 KV814743.1 Protein Homology CDS 185714 186349 . - 0 ID=cds-OFQ19887.1;Parent=gene-HMPREF2948_09300;Dbxref=NCBI_GP:OFQ19887.1;Name=OFQ19887.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:B0BRT8.1;locus_tag=HMPREF2948_09300;product=urease accessory protein UreG;protein_id=OFQ19887.1;transl_table=11 KV814743.1 Genbank gene 186430 187137 . - . ID=gene-HMPREF2948_09305;Name=HMPREF2948_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09305 KV814743.1 Protein Homology CDS 186430 187137 . - 0 ID=cds-OFQ19888.1;Parent=gene-HMPREF2948_09305;Dbxref=NCBI_GP:OFQ19888.1;Name=OFQ19888.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706587.1;locus_tag=HMPREF2948_09305;product=urease accessory protein UreF;protein_id=OFQ19888.1;transl_table=11 KV814743.1 Genbank gene 187122 187664 . - . ID=gene-HMPREF2948_09310;Name=HMPREF2948_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09310 KV814743.1 Protein Homology CDS 187122 187664 . - 0 ID=cds-OFQ19889.1;Parent=gene-HMPREF2948_09310;Dbxref=NCBI_GP:OFQ19889.1;Name=OFQ19889.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636281.1;locus_tag=HMPREF2948_09310;product=urease accessory protein UreE;protein_id=OFQ19889.1;transl_table=11 KV814743.1 Genbank gene 187916 188536 . - . ID=gene-HMPREF2948_09315;Name=HMPREF2948_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09315 KV814743.1 Protein Homology CDS 187916 188536 . - 0 ID=cds-OFQ19890.1;Parent=gene-HMPREF2948_09315;Dbxref=NCBI_GP:OFQ19890.1;Name=OFQ19890.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010676279.1;locus_tag=HMPREF2948_09315;product=glutathione S-transferase;protein_id=OFQ19890.1;transl_table=11 KV814743.1 Genbank gene 188574 190292 . - . ID=gene-HMPREF2948_09320;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=HMPREF2948_09320 KV814743.1 Protein Homology CDS 188574 190292 . - 0 ID=cds-OFQ19891.1;Parent=gene-HMPREF2948_09320;Dbxref=NCBI_GP:OFQ19891.1;Name=OFQ19891.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits;gbkey=CDS;gene=ureC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694142.1;locus_tag=HMPREF2948_09320;product=urease subunit alpha;protein_id=OFQ19891.1;transl_table=11 KV814743.1 Genbank gene 190304 190609 . - . ID=gene-HMPREF2948_09325;Name=ureB;gbkey=Gene;gene=ureB;gene_biotype=protein_coding;locus_tag=HMPREF2948_09325 KV814743.1 Protein Homology CDS 190304 190609 . - 0 ID=cds-OFQ19892.1;Parent=gene-HMPREF2948_09325;Dbxref=NCBI_GP:OFQ19892.1;Name=OFQ19892.1;Note=ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide%3B in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa%3B the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta)%3B in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity%2C optimum growth%2C resistance to low-pH killing in-vitro and persistence in-vivo%2C while the other operon does not seem to be active;gbkey=CDS;gene=ureB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_016984791.1;locus_tag=HMPREF2948_09325;product=urease subunit beta;protein_id=OFQ19892.1;transl_table=11 KV814743.1 Genbank gene 190661 190963 . - . ID=gene-HMPREF2948_09330;Name=HMPREF2948_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09330 KV814743.1 Protein Homology CDS 190661 190963 . - 0 ID=cds-OFQ19893.1;Parent=gene-HMPREF2948_09330;Dbxref=NCBI_GP:OFQ19893.1;Name=OFQ19893.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694143.1;locus_tag=HMPREF2948_09330;product=urease subunit gamma;protein_id=OFQ19893.1;transl_table=11 KV814743.1 Genbank gene 191133 191423 . + . ID=gene-HMPREF2948_09335;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=HMPREF2948_09335 KV814743.1 Protein Homology CDS 191133 191423 . + 0 ID=cds-OFQ19894.1;Parent=gene-HMPREF2948_09335;Dbxref=NCBI_GP:OFQ19894.1;Name=OFQ19894.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;inference=EXISTENCE: similar to AA sequence:SwissProt:P0A1D5.1;locus_tag=HMPREF2948_09335;product=co-chaperone GroES;protein_id=OFQ19894.1;transl_table=11 KV814743.1 Genbank gene 191446 193092 . + . ID=gene-HMPREF2948_09340;Name=groEL;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=HMPREF2948_09340 KV814743.1 Protein Homology CDS 191446 193092 . + 0 ID=cds-OFQ19895.1;Parent=gene-HMPREF2948_09340;Dbxref=NCBI_GP:OFQ19895.1;Name=OFQ19895.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth;gbkey=CDS;gene=groEL;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_010869002.1;locus_tag=HMPREF2948_09340;product=molecular chaperone GroEL;protein_id=OFQ19895.1;transl_table=11 KV814743.1 Genbank gene 193204 193752 . + . ID=gene-HMPREF2948_09345;Name=HMPREF2948_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09345 KV814743.1 Protein Homology CDS 193204 193752 . + 0 ID=cds-OFQ19896.1;Parent=gene-HMPREF2948_09345;Dbxref=NCBI_GP:OFQ19896.1;Name=OFQ19896.1;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693181.1;locus_tag=HMPREF2948_09345;product=hypothetical protein;protein_id=OFQ19896.1;transl_table=11 KV814743.1 Genbank gene 193765 195054 . + . ID=gene-HMPREF2948_09350;Name=HMPREF2948_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09350 KV814743.1 Protein Homology CDS 193765 195054 . + 0 ID=cds-OFQ19897.1;Parent=gene-HMPREF2948_09350;Dbxref=NCBI_GP:OFQ19897.1;Name=OFQ19897.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005698609.1;locus_tag=HMPREF2948_09350;product=Xaa-Pro aminopeptidase;protein_id=OFQ19897.1;transl_table=11 KV814743.1 Genbank gene 195158 195583 . + . ID=gene-HMPREF2948_09355;Name=HMPREF2948_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09355 KV814743.1 Protein Homology CDS 195158 195583 . + 0 ID=cds-OFQ19898.1;Parent=gene-HMPREF2948_09355;Dbxref=NCBI_GP:OFQ19898.1;Name=OFQ19898.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CLE9.1;locus_tag=HMPREF2948_09355;product=universal stress protein;protein_id=OFQ19898.1;transl_table=11 KV814743.1 Genbank gene 195771 198395 . + . ID=gene-HMPREF2948_09360;Name=HMPREF2948_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09360 KV814743.1 Protein Homology CDS 195771 198395 . + 0 ID=cds-OFQ19899.1;Parent=gene-HMPREF2948_09360;Dbxref=NCBI_GP:OFQ19899.1;Name=OFQ19899.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q0I426.1;locus_tag=HMPREF2948_09360;product=alanine--tRNA ligase;protein_id=OFQ19899.1;transl_table=11 KV814743.1 Genbank gene 198474 198665 . + . ID=gene-HMPREF2948_09365;Name=HMPREF2948_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09365 KV814743.1 Protein Homology CDS 198474 198665 . + 0 ID=cds-OFQ19900.1;Parent=gene-HMPREF2948_09365;Dbxref=NCBI_GP:OFQ19900.1;Name=OFQ19900.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005632782.1;locus_tag=HMPREF2948_09365;product=carbon storage regulator;protein_id=OFQ19900.1;transl_table=11 KV814743.1 Genbank gene 198888 199775 . + . ID=gene-HMPREF2948_09370;Name=HMPREF2948_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09370 KV814743.1 Protein Homology CDS 198888 199775 . + 0 ID=cds-OFQ19901.1;Parent=gene-HMPREF2948_09370;Dbxref=NCBI_GP:OFQ19901.1;Name=OFQ19901.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005702076.1;locus_tag=HMPREF2948_09370;product=UTP--glucose-1-phosphate uridylyltransferase;protein_id=OFQ19901.1;transl_table=11 KV814743.1 Genbank gene 199903 200220 . + . ID=gene-HMPREF2948_09375;Name=HMPREF2948_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09375 KV814743.1 Protein Homology CDS 199903 200220 . + 0 ID=cds-OFQ19902.1;Parent=gene-HMPREF2948_09375;Dbxref=NCBI_GP:OFQ19902.1;Name=OFQ19902.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_017805221.1;locus_tag=HMPREF2948_09375;product=transcriptional repressor protein MetJ;protein_id=OFQ19902.1;transl_table=11 KV814743.1 Genbank gene 200223 200609 . - . ID=gene-HMPREF2948_09380;Name=HMPREF2948_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09380 KV814743.1 Protein Homology CDS 200223 200609 . - 0 ID=cds-OFQ19903.1;Parent=gene-HMPREF2948_09380;Dbxref=NCBI_GP:OFQ19903.1;Name=OFQ19903.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44617.1;locus_tag=HMPREF2948_09380;product=Cu(I)-responsive transcriptional regulator;protein_id=OFQ19903.1;transl_table=11 KV814743.1 Genbank gene 200690 200899 . + . ID=gene-HMPREF2948_09385;Name=HMPREF2948_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09385 KV814743.1 Protein Homology CDS 200690 200899 . + 0 ID=cds-OFQ19904.1;Parent=gene-HMPREF2948_09385;Dbxref=NCBI_GP:OFQ19904.1;Name=OFQ19904.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005631184.1;locus_tag=HMPREF2948_09385;product=hypothetical protein;protein_id=OFQ19904.1;transl_table=11 KV814743.1 Genbank gene 200886 203054 . + . ID=gene-HMPREF2948_09390;Name=HMPREF2948_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09390 KV814743.1 Protein Homology CDS 200886 203054 . + 0 ID=cds-OFQ19905.1;Parent=gene-HMPREF2948_09390;Dbxref=NCBI_GP:OFQ19905.1;Name=OFQ19905.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064858.1;locus_tag=HMPREF2948_09390;product=copper-transporting ATPase;protein_id=OFQ19905.1;transl_table=11 KV814743.1 Genbank gene 203092 204495 . - . ID=gene-HMPREF2948_09395;Name=HMPREF2948_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09395 KV814743.1 Protein Homology CDS 203092 204495 . - 0 ID=cds-OFQ19906.1;Parent=gene-HMPREF2948_09395;Dbxref=NCBI_GP:OFQ19906.1;Name=OFQ19906.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696751.1;locus_tag=HMPREF2948_09395;product=two-component sensor histidine kinase;protein_id=OFQ19906.1;transl_table=11 KV814743.1 Genbank gene 204495 205202 . - . ID=gene-HMPREF2948_09400;Name=HMPREF2948_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09400 KV814743.1 Protein Homology CDS 204495 205202 . - 0 ID=cds-OFQ19907.1;Parent=gene-HMPREF2948_09400;Dbxref=NCBI_GP:OFQ19907.1;Name=OFQ19907.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014391512.1;locus_tag=HMPREF2948_09400;product=DNA-binding response regulator;protein_id=OFQ19907.1;transl_table=11 KV814743.1 Genbank gene 205265 205678 . - . ID=gene-HMPREF2948_09405;Name=HMPREF2948_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09405 KV814743.1 Protein Homology CDS 205265 205678 . - 0 ID=cds-OFQ19908.1;Parent=gene-HMPREF2948_09405;Dbxref=NCBI_GP:OFQ19908.1;Name=OFQ19908.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005559427.1;locus_tag=HMPREF2948_09405;product=cell envelope protein SmpA;protein_id=OFQ19908.1;transl_table=11 KV814743.1 Genbank gene 205741 206757 . - . ID=gene-HMPREF2948_09410;Name=HMPREF2948_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09410 KV814743.1 Protein Homology CDS 205741 206757 . - 0 ID=cds-OFQ19909.1;Parent=gene-HMPREF2948_09410;Dbxref=NCBI_GP:OFQ19909.1;Name=OFQ19909.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064862.1;locus_tag=HMPREF2948_09410;product=nucleoid-associated protein YejK;protein_id=OFQ19909.1;transl_table=11 KV814743.1 Genbank gene 206896 207114 . + . ID=gene-HMPREF2948_09415;Name=HMPREF2948_09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09415 KV814743.1 Protein Homology CDS 206896 207114 . + 0 ID=cds-OFQ19910.1;Parent=gene-HMPREF2948_09415;Dbxref=NCBI_GP:OFQ19910.1;Name=OFQ19910.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q4QM60.1;locus_tag=HMPREF2948_09415;product=hypothetical protein;protein_id=OFQ19910.1;transl_table=11 KV814743.1 Genbank gene 207116 208858 . + . ID=gene-HMPREF2948_09420;Name=HMPREF2948_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09420 KV814743.1 Protein Homology CDS 207116 208858 . + 0 ID=cds-OFQ19911.1;Parent=gene-HMPREF2948_09420;Dbxref=NCBI_GP:OFQ19911.1;Name=OFQ19911.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699767.1;locus_tag=HMPREF2948_09420;product=hypothetical protein;protein_id=OFQ19911.1;transl_table=11 KV814743.1 Genbank gene 209049 210041 . + . ID=gene-HMPREF2948_09425;Name=HMPREF2948_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09425 KV814743.1 Protein Homology CDS 209049 210041 . + 0 ID=cds-OFQ19912.1;Parent=gene-HMPREF2948_09425;Dbxref=NCBI_GP:OFQ19912.1;Name=OFQ19912.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005625986.1;locus_tag=HMPREF2948_09425;product=hypothetical protein;protein_id=OFQ19912.1;transl_table=11 KV814743.1 Genbank gene 210161 210236 . - . ID=gene-HMPREF2948_09430;Name=HMPREF2948_09430;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09430 KV814743.1 tRNAscan-SE tRNA 210161 210236 . - . ID=rna-HMPREF2948_09430;Parent=gene-HMPREF2948_09430;anticodon=(pos:complement(210201..210203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09430;product=tRNA-Val KV814743.1 tRNAscan-SE exon 210161 210236 . - . ID=exon-HMPREF2948_09430-1;Parent=rna-HMPREF2948_09430;anticodon=(pos:complement(210201..210203));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09430;product=tRNA-Val KV814743.1 Genbank gene 210296 210371 . - . ID=gene-HMPREF2948_09435;Name=HMPREF2948_09435;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09435 KV814743.1 tRNAscan-SE tRNA 210296 210371 . - . ID=rna-HMPREF2948_09435;Parent=gene-HMPREF2948_09435;anticodon=(pos:complement(210336..210338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09435;product=tRNA-Val KV814743.1 tRNAscan-SE exon 210296 210371 . - . ID=exon-HMPREF2948_09435-1;Parent=rna-HMPREF2948_09435;anticodon=(pos:complement(210336..210338));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09435;product=tRNA-Val KV814743.1 Genbank gene 210419 210494 . - . ID=gene-HMPREF2948_09440;Name=HMPREF2948_09440;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09440 KV814743.1 tRNAscan-SE tRNA 210419 210494 . - . ID=rna-HMPREF2948_09440;Parent=gene-HMPREF2948_09440;anticodon=(pos:complement(210459..210461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09440;product=tRNA-Val KV814743.1 tRNAscan-SE exon 210419 210494 . - . ID=exon-HMPREF2948_09440-1;Parent=rna-HMPREF2948_09440;anticodon=(pos:complement(210459..210461));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09440;product=tRNA-Val KV814743.1 Genbank gene 210539 210614 . - . ID=gene-HMPREF2948_09445;Name=HMPREF2948_09445;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09445 KV814743.1 tRNAscan-SE tRNA 210539 210614 . - . ID=rna-HMPREF2948_09445;Parent=gene-HMPREF2948_09445;anticodon=(pos:complement(210579..210581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09445;product=tRNA-Val KV814743.1 tRNAscan-SE exon 210539 210614 . - . ID=exon-HMPREF2948_09445-1;Parent=rna-HMPREF2948_09445;anticodon=(pos:complement(210579..210581));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09445;product=tRNA-Val KV814743.1 Genbank gene 210787 212229 . + . ID=gene-HMPREF2948_09450;Name=HMPREF2948_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09450 KV814743.1 Protein Homology CDS 210787 212229 . + 0 ID=cds-OFQ19913.1;Parent=gene-HMPREF2948_09450;Dbxref=NCBI_GP:OFQ19913.1;Name=OFQ19913.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668173.1;locus_tag=HMPREF2948_09450;product=glutamate--tRNA ligase;protein_id=OFQ19913.1;transl_table=11 KV814743.1 Genbank gene 212310 212385 . + . ID=gene-HMPREF2948_09455;Name=HMPREF2948_09455;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09455 KV814743.1 tRNAscan-SE tRNA 212310 212385 . + . ID=rna-HMPREF2948_09455;Parent=gene-HMPREF2948_09455;anticodon=(pos:212343..212345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09455;product=tRNA-Ala KV814743.1 tRNAscan-SE exon 212310 212385 . + . ID=exon-HMPREF2948_09455-1;Parent=rna-HMPREF2948_09455;anticodon=(pos:212343..212345);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09455;product=tRNA-Ala KV814743.1 Genbank gene 212441 213187 . - . ID=gene-HMPREF2948_09460;Name=HMPREF2948_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09460 KV814743.1 Protein Homology CDS 212441 213187 . - 0 ID=cds-OFQ19914.1;Parent=gene-HMPREF2948_09460;Dbxref=NCBI_GP:OFQ19914.1;Name=OFQ19914.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697098.1;locus_tag=HMPREF2948_09460;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=OFQ19914.1;transl_table=11 KV814743.1 Genbank gene 213165 213473 . - . ID=gene-HMPREF2948_09465;Name=HMPREF2948_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09465 KV814743.1 Protein Homology CDS 213165 213473 . - 0 ID=cds-OFQ19915.1;Parent=gene-HMPREF2948_09465;Dbxref=NCBI_GP:OFQ19915.1;Name=OFQ19915.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q9CNU9.1;locus_tag=HMPREF2948_09465;product=Trp operon repressor;protein_id=OFQ19915.1;transl_table=11 KV814743.1 Genbank gene 213506 215698 . - . ID=gene-HMPREF2948_09470;Name=HMPREF2948_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09470 KV814743.1 Protein Homology CDS 213506 215698 . - 0 ID=cds-OFQ19916.1;Parent=gene-HMPREF2948_09470;Dbxref=NCBI_GP:OFQ19916.1;Name=OFQ19916.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005567875.1;locus_tag=HMPREF2948_09470;product=septation protein A;protein_id=OFQ19916.1;transl_table=11 KV814743.1 Genbank gene 215765 216061 . - . ID=gene-HMPREF2948_09475;Name=HMPREF2948_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09475 KV814743.1 Protein Homology CDS 215765 216061 . - 0 ID=cds-OFQ19917.1;Parent=gene-HMPREF2948_09475;Dbxref=NCBI_GP:OFQ19917.1;Name=OFQ19917.1;Note=unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005648344.1;locus_tag=HMPREF2948_09475;product=hypothetical protein;protein_id=OFQ19917.1;transl_table=11 KV814743.1 Genbank gene 216073 216543 . - . ID=gene-HMPREF2948_09480;Name=HMPREF2948_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09480 KV814743.1 Protein Homology CDS 216073 216543 . - 0 ID=cds-OFQ19918.1;Parent=gene-HMPREF2948_09480;Dbxref=NCBI_GP:OFQ19918.1;Name=OFQ19918.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697094.1;locus_tag=HMPREF2948_09480;product=acyl-CoA thioesterase;protein_id=OFQ19918.1;transl_table=11 KV814743.1 Genbank gene 216543 217097 . - . ID=gene-HMPREF2948_09485;Name=HMPREF2948_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09485 KV814743.1 Protein Homology CDS 216543 217097 . - 0 ID=cds-OFQ19919.1;Parent=gene-HMPREF2948_09485;Dbxref=NCBI_GP:OFQ19919.1;Name=OFQ19919.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005655641.1;locus_tag=HMPREF2948_09485;product=septation protein A;protein_id=OFQ19919.1;transl_table=11 KV814743.1 Genbank gene 217099 217854 . - . ID=gene-HMPREF2948_09490;Name=HMPREF2948_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09490 KV814743.1 Protein Homology CDS 217099 217854 . - 0 ID=cds-OFQ19920.1;Parent=gene-HMPREF2948_09490;Dbxref=NCBI_GP:OFQ19920.1;Name=OFQ19920.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697083.1;locus_tag=HMPREF2948_09490;product=beta-methylgalactoside transporter;protein_id=OFQ19920.1;transl_table=11 KV814743.1 Genbank gene 218061 218675 . + . ID=gene-HMPREF2948_09495;Name=HMPREF2948_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09495 KV814743.1 Protein Homology CDS 218061 218675 . + 0 ID=cds-OFQ19921.1;Parent=gene-HMPREF2948_09495;Dbxref=NCBI_GP:OFQ19921.1;Name=OFQ19921.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199919.1;locus_tag=HMPREF2948_09495;product=hypothetical protein;protein_id=OFQ19921.1;transl_table=11 KV814743.1 Genbank gene 218732 219370 . - . ID=gene-HMPREF2948_09500;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=HMPREF2948_09500 KV814743.1 Protein Homology CDS 218732 219370 . - 0 ID=cds-OFQ19922.1;Parent=gene-HMPREF2948_09500;Dbxref=NCBI_GP:OFQ19922.1;Name=OFQ19922.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;inference=EXISTENCE: similar to AA sequence:SwissProt:P43846.1;locus_tag=HMPREF2948_09500;product=phosphoribosylglycinamide formyltransferase;protein_id=OFQ19922.1;transl_table=11 KV814743.1 Genbank gene 219439 220476 . - . ID=gene-HMPREF2948_09505;Name=HMPREF2948_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09505 KV814743.1 Protein Homology CDS 219439 220476 . - 0 ID=cds-OFQ19923.1;Parent=gene-HMPREF2948_09505;Dbxref=NCBI_GP:OFQ19923.1;Name=OFQ19923.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VMA4.1;locus_tag=HMPREF2948_09505;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=OFQ19923.1;transl_table=11 KV814743.1 Genbank gene 220630 220917 . - . ID=gene-HMPREF2948_09510;Name=HMPREF2948_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09510 KV814743.1 Protein Homology CDS 220630 220917 . - 0 ID=cds-OFQ19924.1;Parent=gene-HMPREF2948_09510;Dbxref=NCBI_GP:OFQ19924.1;Name=OFQ19924.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44686.1;locus_tag=HMPREF2948_09510;product=hypothetical protein;protein_id=OFQ19924.1;transl_table=11 KV814743.1 Genbank gene 221126 222502 . + . ID=gene-HMPREF2948_09515;Name=HMPREF2948_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09515 KV814743.1 Protein Homology CDS 221126 222502 . + 0 ID=cds-OFQ19925.1;Parent=gene-HMPREF2948_09515;Dbxref=NCBI_GP:OFQ19925.1;Name=OFQ19925.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662624.1;locus_tag=HMPREF2948_09515;product=hypothetical protein;protein_id=OFQ19925.1;transl_table=11 KV814743.1 Genbank gene 222593 223132 . + . ID=gene-HMPREF2948_09520;Name=HMPREF2948_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09520 KV814743.1 Protein Homology CDS 222593 223132 . + 0 ID=cds-OFQ19926.1;Parent=gene-HMPREF2948_09520;Dbxref=NCBI_GP:OFQ19926.1;Name=OFQ19926.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064877.1;locus_tag=HMPREF2948_09520;product=cysteine methyltransferase;protein_id=OFQ19926.1;transl_table=11 KV814743.1 Genbank gene 223129 223800 . + . ID=gene-HMPREF2948_09525;Name=HMPREF2948_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09525 KV814743.1 Protein Homology CDS 223129 223800 . + 0 ID=cds-OFQ19927.1;Parent=gene-HMPREF2948_09525;Dbxref=NCBI_GP:OFQ19927.1;Name=OFQ19927.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064878.1;locus_tag=HMPREF2948_09525;product=DNA mismatch repair protein MutH;protein_id=OFQ19927.1;transl_table=11 KV814743.1 Genbank gene 223817 225109 . - . ID=gene-HMPREF2948_09530;Name=HMPREF2948_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09530 KV814743.1 Protein Homology CDS 223817 225109 . - 0 ID=cds-OFQ19928.1;Parent=gene-HMPREF2948_09530;Dbxref=NCBI_GP:OFQ19928.1;Name=OFQ19928.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696723.1;locus_tag=HMPREF2948_09530;product=tRNA(Ile)-lysidine synthase;protein_id=OFQ19928.1;transl_table=11 KV814743.1 Genbank gene 225109 225975 . - . ID=gene-HMPREF2948_09535;Name=HMPREF2948_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09535 KV814743.1 Protein Homology CDS 225109 225975 . - 0 ID=cds-OFQ19929.1;Parent=gene-HMPREF2948_09535;Dbxref=NCBI_GP:OFQ19929.1;Name=OFQ19929.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005703391.1;locus_tag=HMPREF2948_09535;product=pyridoxal kinase;protein_id=OFQ19929.1;transl_table=11 KV814743.1 Genbank gene 226092 227039 . - . ID=gene-HMPREF2948_09540;Name=HMPREF2948_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09540 KV814743.1 Protein Homology CDS 226092 227039 . - 0 ID=cds-OFQ19930.1;Parent=gene-HMPREF2948_09540;Dbxref=NCBI_GP:OFQ19930.1;Name=OFQ19930.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A6VNE6.1;locus_tag=HMPREF2948_09540;product=acetyl-CoA carboxylase subunit alpha;protein_id=OFQ19930.1;transl_table=11 KV814743.1 Genbank gene 227127 227912 . - . ID=gene-HMPREF2948_09545;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=HMPREF2948_09545 KV814743.1 Protein Homology CDS 227127 227912 . - 0 ID=cds-OFQ19931.1;Parent=gene-HMPREF2948_09545;Dbxref=NCBI_GP:OFQ19931.1;Name=OFQ19931.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633994.1;locus_tag=HMPREF2948_09545;product=high-affinity zinc transporter membrane component;protein_id=OFQ19931.1;transl_table=11 KV814743.1 Genbank gene 227922 228716 . - . ID=gene-HMPREF2948_09550;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=HMPREF2948_09550 KV814743.1 Protein Homology CDS 227922 228716 . - 0 ID=cds-OFQ19932.1;Parent=gene-HMPREF2948_09550;Dbxref=NCBI_GP:OFQ19932.1;Name=OFQ19932.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064883.1;locus_tag=HMPREF2948_09550;product=Mn2+/Zn2+ABC transporter ATP-binding protein;protein_id=OFQ19932.1;transl_table=11 KV814743.1 Genbank gene 228895 230370 . + . ID=gene-HMPREF2948_09555;Name=HMPREF2948_09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09555 KV814743.1 Protein Homology CDS 228895 230370 . + 0 ID=cds-OFQ19933.1;Parent=gene-HMPREF2948_09555;Dbxref=NCBI_GP:OFQ19933.1;Name=OFQ19933.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005639262.1;locus_tag=HMPREF2948_09555;product=peptidase M23;protein_id=OFQ19933.1;transl_table=11 KV814743.1 Genbank gene 230504 231457 . + . ID=gene-HMPREF2948_09560;Name=HMPREF2948_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09560 KV814743.1 Protein Homology CDS 230504 231457 . + 0 ID=cds-OFQ19934.1;Parent=gene-HMPREF2948_09560;Dbxref=NCBI_GP:OFQ19934.1;Name=OFQ19934.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697091.1;locus_tag=HMPREF2948_09560;product=iron ABC transporter permease;protein_id=OFQ19934.1;transl_table=11 KV814743.1 Genbank gene 231450 232409 . + . ID=gene-HMPREF2948_09565;Name=HMPREF2948_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09565 KV814743.1 Protein Homology CDS 231450 232409 . + 0 ID=cds-OFQ19935.1;Parent=gene-HMPREF2948_09565;Dbxref=NCBI_GP:OFQ19935.1;Name=OFQ19935.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018345866.1;locus_tag=HMPREF2948_09565;product=iron ABC transporter permease;protein_id=OFQ19935.1;transl_table=11 KV814743.1 Genbank gene 232400 233161 . + . ID=gene-HMPREF2948_09570;Name=HMPREF2948_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09570 KV814743.1 Protein Homology CDS 232400 233161 . + 0 ID=cds-OFQ19936.1;Parent=gene-HMPREF2948_09570;Dbxref=NCBI_GP:OFQ19936.1;Name=OFQ19936.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013745077.1;locus_tag=HMPREF2948_09570;product=iron ABC transporter ATP-binding protein;protein_id=OFQ19936.1;transl_table=11 KV814743.1 Genbank gene 233176 234084 . + . ID=gene-HMPREF2948_09575;Name=HMPREF2948_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09575 KV814743.1 Protein Homology CDS 233176 234084 . + 0 ID=cds-OFQ19937.1;Parent=gene-HMPREF2948_09575;Dbxref=NCBI_GP:OFQ19937.1;Name=OFQ19937.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064888.1;locus_tag=HMPREF2948_09575;product=ABC transporter;protein_id=OFQ19937.1;transl_table=11 KV814743.1 Genbank gene 234205 235155 . + . ID=gene-HMPREF2948_09580;Name=HMPREF2948_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09580 KV814743.1 Protein Homology CDS 234205 235155 . + 0 ID=cds-OFQ19938.1;Parent=gene-HMPREF2948_09580;Dbxref=NCBI_GP:OFQ19938.1;Name=OFQ19938.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697092.1;locus_tag=HMPREF2948_09580;product=transcriptional regulator;protein_id=OFQ19938.1;transl_table=11 KV814743.1 Genbank gene 235145 236500 . - . ID=gene-HMPREF2948_09585;Name=HMPREF2948_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09585 KV814743.1 Protein Homology CDS 235145 236500 . - 0 ID=cds-OFQ19939.1;Parent=gene-HMPREF2948_09585;Dbxref=NCBI_GP:OFQ19939.1;Name=OFQ19939.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697077.1;locus_tag=HMPREF2948_09585;product=GTPase HflX;protein_id=OFQ19939.1;transl_table=11 KV814743.1 Genbank gene 236510 236791 . - . ID=gene-HMPREF2948_09590;Name=HMPREF2948_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09590 KV814743.1 Protein Homology CDS 236510 236791 . - 0 ID=cds-OFQ19940.1;Parent=gene-HMPREF2948_09590;Dbxref=NCBI_GP:OFQ19940.1;Name=OFQ19940.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693756.1;locus_tag=HMPREF2948_09590;product=RNA-binding protein Hfq;protein_id=OFQ19940.1;transl_table=11 KV814743.1 Genbank gene 236878 237858 . - . ID=gene-HMPREF2948_09595;Name=HMPREF2948_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09595 KV814743.1 Protein Homology CDS 236878 237858 . - 0 ID=cds-OFQ19941.1;Parent=gene-HMPREF2948_09595;Dbxref=NCBI_GP:OFQ19941.1;Name=OFQ19941.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064891.1;locus_tag=HMPREF2948_09595;product=23S rRNA pseudouridylate synthase;protein_id=OFQ19941.1;transl_table=11 KV814743.1 Genbank gene 238286 241090 . + . ID=gene-HMPREF2948_09600;Name=HMPREF2948_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09600 KV814743.1 Protein Homology CDS 238286 241090 . + 0 ID=cds-OFQ19942.1;Parent=gene-HMPREF2948_09600;Dbxref=NCBI_GP:OFQ19942.1;Name=OFQ19942.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005688744.1;locus_tag=HMPREF2948_09600;product=ribonuclease E;protein_id=OFQ19942.1;transl_table=11 KV814743.1 Genbank gene 241245 241334 . + . ID=gene-HMPREF2948_09605;Name=HMPREF2948_09605;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09605 KV814743.1 tRNAscan-SE tRNA 241245 241334 . + . ID=rna-HMPREF2948_09605;Parent=gene-HMPREF2948_09605;anticodon=(pos:241279..241281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09605;product=tRNA-Ser KV814743.1 tRNAscan-SE exon 241245 241334 . + . ID=exon-HMPREF2948_09605-1;Parent=rna-HMPREF2948_09605;anticodon=(pos:241279..241281);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09605;product=tRNA-Ser KV814743.1 Genbank gene 241402 241983 . - . ID=gene-HMPREF2948_09610;Name=HMPREF2948_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09610 KV814743.1 Protein Homology CDS 241402 241983 . - 0 ID=cds-OFQ19943.1;Parent=gene-HMPREF2948_09610;Dbxref=NCBI_GP:OFQ19943.1;Name=OFQ19943.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064894.1;locus_tag=HMPREF2948_09610;product=ribonuclease T;protein_id=OFQ19943.1;transl_table=11 KV814743.1 Genbank gene 242023 243375 . - . ID=gene-HMPREF2948_09615;Name=HMPREF2948_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09615 KV814743.1 Protein Homology CDS 242023 243375 . - 0 ID=cds-OFQ19944.1;Parent=gene-HMPREF2948_09615;Dbxref=NCBI_GP:OFQ19944.1;Name=OFQ19944.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199880.1;locus_tag=HMPREF2948_09615;product=sodium:proton antiporter;protein_id=OFQ19944.1;transl_table=11 KV814743.1 Genbank gene 243722 244411 . - . ID=gene-HMPREF2948_09620;Name=HMPREF2948_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09620 KV814743.1 Protein Homology CDS 243722 244411 . - 0 ID=cds-OFQ19945.1;Parent=gene-HMPREF2948_09620;Dbxref=NCBI_GP:OFQ19945.1;Name=OFQ19945.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005691801.1;locus_tag=HMPREF2948_09620;product=ribonuclease T;protein_id=OFQ19945.1;transl_table=11 KV814743.1 Genbank gene 244486 244893 . - . ID=gene-HMPREF2948_09625;Name=HMPREF2948_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09625 KV814743.1 Protein Homology CDS 244486 244893 . - 0 ID=cds-OFQ19946.1;Parent=gene-HMPREF2948_09625;Dbxref=NCBI_GP:OFQ19946.1;Name=OFQ19946.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_012771684.1;locus_tag=HMPREF2948_09625;product=lactoylglutathione lyase;protein_id=OFQ19946.1;transl_table=11 KV814743.1 Genbank gene 244989 245714 . - . ID=gene-HMPREF2948_09630;Name=HMPREF2948_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09630 KV814743.1 Protein Homology CDS 244989 245714 . - 0 ID=cds-OFQ19947.1;Parent=gene-HMPREF2948_09630;Dbxref=NCBI_GP:OFQ19947.1;Name=OFQ19947.1;Note=catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005578766.1;locus_tag=HMPREF2948_09630;product=tRNA (uridine-5-oxyacetic acid methyl ester)(34) synthase TrmP;protein_id=OFQ19947.1;transl_table=11 KV814743.1 Genbank gene 245899 247665 . + . ID=gene-HMPREF2948_09635;Name=HMPREF2948_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09635 KV814743.1 Protein Homology CDS 245899 247665 . + 0 ID=cds-OFQ19948.1;Parent=gene-HMPREF2948_09635;Dbxref=NCBI_GP:OFQ19948.1;Name=OFQ19948.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005694347.1;locus_tag=HMPREF2948_09635;product=aspartate--tRNA ligase;protein_id=OFQ19948.1;transl_table=11 KV814743.1 Genbank gene 247747 248019 . + . ID=gene-HMPREF2948_09640;Name=HMPREF2948_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09640 KV814743.1 GeneMarkS+ CDS 247747 248019 . + 0 ID=cds-OFQ19949.1;Parent=gene-HMPREF2948_09640;Dbxref=NCBI_GP:OFQ19949.1;Name=OFQ19949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09640;product=hypothetical protein;protein_id=OFQ19949.1;transl_table=11 KV814743.1 Genbank gene 248452 249720 . + . ID=gene-HMPREF2948_09645;Name=HMPREF2948_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09645 KV814743.1 Protein Homology CDS 248452 249720 . + 0 ID=cds-OFQ19950.1;Parent=gene-HMPREF2948_09645;Dbxref=NCBI_GP:OFQ19950.1;Name=OFQ19950.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005564376.1;locus_tag=HMPREF2948_09645;product=hypothetical protein;protein_id=OFQ19950.1;transl_table=11 KV814743.1 Genbank gene 249822 250280 . + . ID=gene-HMPREF2948_09650;Name=HMPREF2948_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09650 KV814743.1 Protein Homology CDS 249822 250280 . + 0 ID=cds-OFQ19951.1;Parent=gene-HMPREF2948_09650;Dbxref=NCBI_GP:OFQ19951.1;Name=OFQ19951.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697081.1;locus_tag=HMPREF2948_09650;product=NUDIX pyrophosphatase;protein_id=OFQ19951.1;transl_table=11 KV814743.1 Genbank gene 250328 251068 . + . ID=gene-HMPREF2948_09655;Name=HMPREF2948_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09655 KV814743.1 Protein Homology CDS 250328 251068 . + 0 ID=cds-OFQ19952.1;Parent=gene-HMPREF2948_09655;Dbxref=NCBI_GP:OFQ19952.1;Name=OFQ19952.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005624439.1;locus_tag=HMPREF2948_09655;product=hypothetical protein;protein_id=OFQ19952.1;transl_table=11 KV814743.1 Genbank gene 251086 251520 . + . ID=gene-HMPREF2948_09660;Name=HMPREF2948_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09660 KV814743.1 Protein Homology CDS 251086 251520 . + 0 ID=cds-OFQ19953.1;Parent=gene-HMPREF2948_09660;Dbxref=NCBI_GP:OFQ19953.1;Name=OFQ19953.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005542301.1;locus_tag=HMPREF2948_09660;product=hypothetical protein;protein_id=OFQ19953.1;transl_table=11 KV814743.1 Genbank gene 251571 252143 . + . ID=gene-HMPREF2948_09665;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=HMPREF2948_09665 KV814743.1 Protein Homology CDS 251571 252143 . + 0 ID=cds-OFQ19954.1;Parent=gene-HMPREF2948_09665;Dbxref=NCBI_GP:OFQ19954.1;Name=OFQ19954.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;inference=EXISTENCE: similar to AA sequence:SwissProt:A5UGD0.1;locus_tag=HMPREF2948_09665;product=crossover junction endodeoxyribonuclease RuvC;protein_id=OFQ19954.1;transl_table=11 KV814743.1 Genbank gene 252202 252813 . + . ID=gene-HMPREF2948_09670;Name=HMPREF2948_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09670 KV814743.1 Protein Homology CDS 252202 252813 . + 0 ID=cds-OFQ19955.1;Parent=gene-HMPREF2948_09670;Dbxref=NCBI_GP:OFQ19955.1;Name=OFQ19955.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:A8AFI0.1;locus_tag=HMPREF2948_09670;product=Holliday junction ATP-dependent DNA helicase RuvA;protein_id=OFQ19955.1;transl_table=11 KV814743.1 Genbank gene 252827 253834 . + . ID=gene-HMPREF2948_09675;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=HMPREF2948_09675 KV814743.1 Protein Homology CDS 252827 253834 . + 0 ID=cds-OFQ19956.1;Parent=gene-HMPREF2948_09675;Dbxref=NCBI_GP:OFQ19956.1;Name=OFQ19956.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005759314.1;locus_tag=HMPREF2948_09675;product=Holliday junction DNA helicase RuvB;protein_id=OFQ19956.1;transl_table=11 KV814743.1 Genbank gene 253890 254210 . - . ID=gene-HMPREF2948_09680;Name=HMPREF2948_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09680 KV814743.1 Protein Homology CDS 253890 254210 . - 0 ID=cds-OFQ19957.1;Parent=gene-HMPREF2948_09680;Dbxref=NCBI_GP:OFQ19957.1;Name=OFQ19957.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064907.1;locus_tag=HMPREF2948_09680;product=recombinase XerD;protein_id=OFQ19957.1;transl_table=11 KV814743.1 Genbank gene 254662 256227 . + . ID=gene-HMPREF2948_09685;Name=HMPREF2948_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09685 KV814743.1 Protein Homology CDS 254662 256227 . + 0 ID=cds-OFQ19958.1;Parent=gene-HMPREF2948_09685;Dbxref=NCBI_GP:OFQ19958.1;Name=OFQ19958.1;Note=part of the aerobic respiratory chain%3B catalyzes the ubiquinol to ubiquinone;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011199894.1;locus_tag=HMPREF2948_09685;product=cytochrome d terminal oxidase subunit 1;protein_id=OFQ19958.1;transl_table=11 KV814743.1 Genbank gene 256242 257381 . + . ID=gene-HMPREF2948_09690;Name=HMPREF2948_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09690 KV814743.1 Protein Homology CDS 256242 257381 . + 0 ID=cds-OFQ19959.1;Parent=gene-HMPREF2948_09690;Dbxref=NCBI_GP:OFQ19959.1;Name=OFQ19959.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_011608411.1;locus_tag=HMPREF2948_09690;product=cytochrome d ubiquinol oxidase subunit 2;protein_id=OFQ19959.1;transl_table=11 KV814743.1 Genbank gene 257494 257781 . + . ID=gene-HMPREF2948_09695;Name=HMPREF2948_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09695 KV814743.1 Protein Homology CDS 257494 257781 . + 0 ID=cds-OFQ19960.1;Parent=gene-HMPREF2948_09695;Dbxref=NCBI_GP:OFQ19960.1;Name=OFQ19960.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005641612.1;locus_tag=HMPREF2948_09695;product=cytochrome bd biosynthesis protein;protein_id=OFQ19960.1;transl_table=11 KV814743.1 Genbank gene 257874 258281 . + . ID=gene-HMPREF2948_09700;Name=HMPREF2948_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09700 KV814743.1 Protein Homology CDS 257874 258281 . + 0 ID=cds-OFQ19967.1;Parent=gene-HMPREF2948_09700;Dbxref=NCBI_GP:OFQ19967.1;Name=OFQ19967.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013526516.1;locus_tag=HMPREF2948_09700;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=OFQ19967.1;transl_table=11 KV814743.1 Genbank gene 258302 258988 . + . ID=gene-HMPREF2948_09705;Name=HMPREF2948_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09705 KV814743.1 Protein Homology CDS 258302 258988 . + 0 ID=cds-OFQ19961.1;Parent=gene-HMPREF2948_09705;Dbxref=NCBI_GP:OFQ19961.1;Name=OFQ19961.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43768.1;locus_tag=HMPREF2948_09705;product=Tol-Pal system subunit TolQ;protein_id=OFQ19961.1;transl_table=11 KV814743.1 Genbank gene 259067 259486 . + . ID=gene-HMPREF2948_09710;Name=HMPREF2948_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09710 KV814743.1 Protein Homology CDS 259067 259486 . + 0 ID=cds-OFQ19962.1;Parent=gene-HMPREF2948_09710;Dbxref=NCBI_GP:OFQ19962.1;Name=OFQ19962.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P43769.1;locus_tag=HMPREF2948_09710;product=protein TolR;protein_id=OFQ19962.1;transl_table=11 KV814743.1 Genbank gene 259505 260806 . + . ID=gene-HMPREF2948_09715;Name=HMPREF2948_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09715 KV814743.1 Protein Homology CDS 259505 260806 . + 0 ID=cds-OFQ19963.1;Parent=gene-HMPREF2948_09715;Dbxref=NCBI_GP:OFQ19963.1;Name=OFQ19963.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696672.1;locus_tag=HMPREF2948_09715;product=cell envelope integrity protein TolA;protein_id=OFQ19963.1;transl_table=11 KV814743.1 Genbank gene 260848 262131 . + . ID=gene-HMPREF2948_09720;Name=HMPREF2948_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09720 KV814743.1 Protein Homology CDS 260848 262131 . + 0 ID=cds-OFQ19964.1;Parent=gene-HMPREF2948_09720;Dbxref=NCBI_GP:OFQ19964.1;Name=OFQ19964.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626967.1;locus_tag=HMPREF2948_09720;product=translocation protein TolB;protein_id=OFQ19964.1;transl_table=11 KV814743.1 Genbank gene 262156 262623 . + . ID=gene-HMPREF2948_09725;Name=HMPREF2948_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09725 KV814743.1 Protein Homology CDS 262156 262623 . + 0 ID=cds-OFQ19965.1;Parent=gene-HMPREF2948_09725;Dbxref=NCBI_GP:OFQ19965.1;Name=OFQ19965.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005652235.1;locus_tag=HMPREF2948_09725;product=peptidoglycan-associated lipoprotein;protein_id=OFQ19965.1;transl_table=11 KV814743.1 Genbank gene 262988 263063 . + . ID=gene-HMPREF2948_09730;Name=HMPREF2948_09730;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09730 KV814743.1 tRNAscan-SE tRNA 262988 263063 . + . ID=rna-HMPREF2948_09730;Parent=gene-HMPREF2948_09730;anticodon=(pos:263021..263023);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09730;product=tRNA-Lys KV814743.1 tRNAscan-SE exon 262988 263063 . + . ID=exon-HMPREF2948_09730-1;Parent=rna-HMPREF2948_09730;anticodon=(pos:263021..263023);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09730;product=tRNA-Lys KV814743.1 Genbank gene 263094 263169 . + . ID=gene-HMPREF2948_09735;Name=HMPREF2948_09735;gbkey=Gene;gene_biotype=tRNA;locus_tag=HMPREF2948_09735 KV814743.1 tRNAscan-SE tRNA 263094 263169 . + . ID=rna-HMPREF2948_09735;Parent=gene-HMPREF2948_09735;anticodon=(pos:263127..263129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09735;product=tRNA-Lys KV814743.1 tRNAscan-SE exon 263094 263169 . + . ID=exon-HMPREF2948_09735-1;Parent=rna-HMPREF2948_09735;anticodon=(pos:263127..263129);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:1.23;locus_tag=HMPREF2948_09735;product=tRNA-Lys KV814743.1 Genbank gene 263292 264011 . + . ID=gene-HMPREF2948_09740;Name=HMPREF2948_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09740 KV814743.1 Protein Homology CDS 263292 264011 . + 0 ID=cds-OFQ19703.1;Parent=gene-HMPREF2948_09740;Dbxref=NCBI_GP:OFQ19703.1;Name=OFQ19703.1;Note=catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44676.2;locus_tag=HMPREF2948_09740;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=OFQ19703.1;transl_table=11 KV814743.1 Genbank gene 264071 264526 . + . ID=gene-HMPREF2948_09745;Name=HMPREF2948_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09745 KV814743.1 Protein Homology CDS 264071 264526 . + 0 ID=cds-OFQ19704.1;Parent=gene-HMPREF2948_09745;Dbxref=NCBI_GP:OFQ19704.1;Name=OFQ19704.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_013525578.1;locus_tag=HMPREF2948_09745;product=transcriptional regulator;protein_id=OFQ19704.1;transl_table=11 KV814743.1 Genbank gene 264590 265804 . + . ID=gene-HMPREF2948_09750;Name=HMPREF2948_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09750 KV814743.1 Protein Homology CDS 264590 265804 . + 0 ID=cds-OFQ19705.1;Parent=gene-HMPREF2948_09750;Dbxref=NCBI_GP:OFQ19705.1;Name=OFQ19705.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355286.1;locus_tag=HMPREF2948_09750;product=cysteine desulfurase IscS;protein_id=OFQ19705.1;transl_table=11 KV814743.1 Genbank gene 265859 266242 . + . ID=gene-HMPREF2948_09755;Name=HMPREF2948_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09755 KV814743.1 Protein Homology CDS 265859 266242 . + 0 ID=cds-OFQ19706.1;Parent=gene-HMPREF2948_09755;Dbxref=NCBI_GP:OFQ19706.1;Name=OFQ19706.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626962.1;locus_tag=HMPREF2948_09755;product=scaffolding protein;protein_id=OFQ19706.1;transl_table=11 KV814743.1 Genbank gene 266293 266616 . + . ID=gene-HMPREF2948_09760;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=HMPREF2948_09760 KV814743.1 Protein Homology CDS 266293 266616 . + 0 ID=cds-OFQ19707.1;Parent=gene-HMPREF2948_09760;Dbxref=NCBI_GP:OFQ19707.1;Name=OFQ19707.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005706573.1;locus_tag=HMPREF2948_09760;product=iron-sulfur cluster assembly protein IscA;protein_id=OFQ19707.1;transl_table=11 KV814743.1 Genbank gene 266626 267147 . + . ID=gene-HMPREF2948_09765;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=HMPREF2948_09765 KV814743.1 Protein Homology CDS 266626 267147 . + 0 ID=cds-OFQ19708.1;Parent=gene-HMPREF2948_09765;Dbxref=NCBI_GP:OFQ19708.1;Name=OFQ19708.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005559982.1;locus_tag=HMPREF2948_09765;product=co-chaperone HscB;protein_id=OFQ19708.1;transl_table=11 KV814743.1 Genbank gene 267222 267908 . + . ID=gene-HMPREF2948_09770;Name=HMPREF2948_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09770 KV814743.1 Protein Homology CDS 267222 267908 . + 0 ID=cds-OFQ19709.1;Parent=gene-HMPREF2948_09770;Dbxref=NCBI_GP:OFQ19709.1;Name=OFQ19709.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005626954.1;locus_tag=HMPREF2948_09770;product=hypothetical protein;protein_id=OFQ19709.1;transl_table=11 KV814743.1 Genbank gene 267949 269805 . + . ID=gene-HMPREF2948_09775;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=HMPREF2948_09775 KV814743.1 Protein Homology CDS 267949 269805 . + 0 ID=cds-OFQ19710.1;Parent=gene-HMPREF2948_09775;Dbxref=NCBI_GP:OFQ19710.1;Name=OFQ19710.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009766721.1;locus_tag=HMPREF2948_09775;product=molecular chaperone HscA;protein_id=OFQ19710.1;transl_table=11 KV814743.1 Genbank gene 269851 270192 . + . ID=gene-HMPREF2948_09780;Name=HMPREF2948_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09780 KV814743.1 Protein Homology CDS 269851 270192 . + 0 ID=cds-OFQ19711.1;Parent=gene-HMPREF2948_09780;Dbxref=NCBI_GP:OFQ19711.1;Name=OFQ19711.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005656373.1;locus_tag=HMPREF2948_09780;product=2Fe-2S ferredoxin;protein_id=OFQ19711.1;transl_table=11 KV814743.1 Genbank gene 270192 270386 . + . ID=gene-HMPREF2948_09785;Name=HMPREF2948_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09785 KV814743.1 Protein Homology CDS 270192 270386 . + 0 ID=cds-OFQ19712.1;Parent=gene-HMPREF2948_09785;Dbxref=NCBI_GP:OFQ19712.1;Name=OFQ19712.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005711410.1;locus_tag=HMPREF2948_09785;product=Fe-S assembly protein IscX;protein_id=OFQ19712.1;transl_table=11 KV814743.1 Genbank gene 270501 271511 . - . ID=gene-HMPREF2948_09790;Name=mglC;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=HMPREF2948_09790 KV814743.1 Protein Homology CDS 270501 271511 . - 0 ID=cds-OFQ19713.1;Parent=gene-HMPREF2948_09790;Dbxref=NCBI_GP:OFQ19713.1;Name=OFQ19713.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_018355241.1;locus_tag=HMPREF2948_09790;product=beta-methylgalactoside transporter permease;protein_id=OFQ19713.1;transl_table=11 KV814743.1 Genbank gene 271530 273044 . - . ID=gene-HMPREF2948_09795;Name=HMPREF2948_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09795 KV814743.1 Protein Homology CDS 271530 273044 . - 0 ID=cds-OFQ19714.1;Parent=gene-HMPREF2948_09795;Dbxref=NCBI_GP:OFQ19714.1;Name=OFQ19714.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697068.1;locus_tag=HMPREF2948_09795;product=sugar ABC transporter ATP-binding protein;protein_id=OFQ19714.1;transl_table=11 KV814743.1 Genbank gene 273123 274118 . - . ID=gene-HMPREF2948_09800;Name=HMPREF2948_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09800 KV814743.1 Protein Homology CDS 273123 274118 . - 0 ID=cds-OFQ19715.1;Parent=gene-HMPREF2948_09800;Dbxref=NCBI_GP:OFQ19715.1;Name=OFQ19715.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064930.1;locus_tag=HMPREF2948_09800;product=galactose ABC transporter substrate-binding protein;protein_id=OFQ19715.1;transl_table=11 KV814743.1 Genbank gene 274299 275306 . - . ID=gene-HMPREF2948_09805;Name=HMPREF2948_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09805 KV814743.1 Protein Homology CDS 274299 275306 . - 0 ID=cds-OFQ19743.1;Parent=gene-HMPREF2948_09805;Dbxref=NCBI_GP:OFQ19743.1;Name=OFQ19743.1;Note=controls transcription of galETKM;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064931.1;locus_tag=HMPREF2948_09805;product=transcriptional regulator;protein_id=OFQ19743.1;transl_table=11 KV814743.1 Genbank gene 275522 276568 . + . ID=gene-HMPREF2948_09810;Name=HMPREF2948_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09810 KV814743.1 Protein Homology CDS 275522 276568 . + 0 ID=cds-OFQ19716.1;Parent=gene-HMPREF2948_09810;Dbxref=NCBI_GP:OFQ19716.1;Name=OFQ19716.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005633419.1;locus_tag=HMPREF2948_09810;product=galactose-1-phosphate uridylyltransferase;protein_id=OFQ19716.1;transl_table=11 KV814743.1 Genbank gene 276623 277777 . + . ID=gene-HMPREF2948_09815;Name=HMPREF2948_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09815 KV814743.1 Protein Homology CDS 276623 277777 . + 0 ID=cds-OFQ19717.1;Parent=gene-HMPREF2948_09815;Dbxref=NCBI_GP:OFQ19717.1;Name=OFQ19717.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005546593.1;locus_tag=HMPREF2948_09815;product=galactokinase;protein_id=OFQ19717.1;transl_table=11 KV814743.1 Genbank gene 277771 278796 . + . ID=gene-HMPREF2948_09820;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=HMPREF2948_09820 KV814743.1 Protein Homology CDS 277771 278796 . + 0 ID=cds-OFQ19718.1;Parent=gene-HMPREF2948_09820;Dbxref=NCBI_GP:OFQ19718.1;Name=OFQ19718.1;Note=mutarotase%3B catalyzes the conversion of beta-galactose to the alpha-anomer%3B links the metabolism of lactose and galactose;gbkey=CDS;gene=galM;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_015701871.1;locus_tag=HMPREF2948_09820;product=galactose mutarotase;protein_id=OFQ19718.1;transl_table=11 KV814743.1 Genbank gene 278938 279834 . + . ID=gene-HMPREF2948_09825;Name=HMPREF2948_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09825 KV814743.1 Protein Homology CDS 278938 279834 . + 0 ID=cds-OFQ19719.1;Parent=gene-HMPREF2948_09825;Dbxref=NCBI_GP:OFQ19719.1;Name=OFQ19719.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:Q57368.1;locus_tag=HMPREF2948_09825;product=magnesium/cobalt efflux protein;protein_id=OFQ19719.1;transl_table=11 KV814743.1 Genbank gene 279909 281441 . + . ID=gene-HMPREF2948_09830;Name=HMPREF2948_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09830 KV814743.1 Protein Homology CDS 279909 281441 . + 0 ID=cds-OFQ19744.1;Parent=gene-HMPREF2948_09830;Dbxref=NCBI_GP:OFQ19744.1;Name=OFQ19744.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064937.1;locus_tag=HMPREF2948_09830;product=apolipoprotein N-acyltransferase;protein_id=OFQ19744.1;transl_table=11 KV814743.1 Genbank gene 281513 282307 . + . ID=gene-HMPREF2948_09835;Name=HMPREF2948_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09835 KV814743.1 Protein Homology CDS 281513 282307 . + 0 ID=cds-OFQ19720.1;Parent=gene-HMPREF2948_09835;Dbxref=NCBI_GP:OFQ19720.1;Name=OFQ19720.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005628331.1;locus_tag=HMPREF2948_09835;product=ABC transporter ATP-binding protein;protein_id=OFQ19720.1;transl_table=11 KV814743.1 Genbank gene 282304 283089 . + . ID=gene-HMPREF2948_09840;Name=HMPREF2948_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09840 KV814743.1 Protein Homology CDS 282304 283089 . + 0 ID=cds-OFQ19721.1;Parent=gene-HMPREF2948_09840;Dbxref=NCBI_GP:OFQ19721.1;Name=OFQ19721.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005651728.1;locus_tag=HMPREF2948_09840;product=ABC transporter permease;protein_id=OFQ19721.1;transl_table=11 KV814743.1 Genbank gene 283102 283608 . + . ID=gene-HMPREF2948_09845;Name=HMPREF2948_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09845 KV814743.1 Protein Homology CDS 283102 283608 . + 0 ID=cds-OFQ19722.1;Parent=gene-HMPREF2948_09845;Dbxref=NCBI_GP:OFQ19722.1;Name=OFQ19722.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696642.1;locus_tag=HMPREF2948_09845;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=OFQ19722.1;transl_table=11 KV814743.1 Genbank gene 283630 284277 . + . ID=gene-HMPREF2948_09850;Name=HMPREF2948_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09850 KV814743.1 Protein Homology CDS 283630 284277 . + 0 ID=cds-OFQ19723.1;Parent=gene-HMPREF2948_09850;Dbxref=NCBI_GP:OFQ19723.1;Name=OFQ19723.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014990891.1;locus_tag=HMPREF2948_09850;product=hypothetical protein;protein_id=OFQ19723.1;transl_table=11 KV814743.1 Genbank gene 284282 284617 . + . ID=gene-HMPREF2948_09855;Name=HMPREF2948_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09855 KV814743.1 Protein Homology CDS 284282 284617 . + 0 ID=cds-OFQ19724.1;Parent=gene-HMPREF2948_09855;Dbxref=NCBI_GP:OFQ19724.1;Name=OFQ19724.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696639.1;locus_tag=HMPREF2948_09855;product=NTP-binding protein;protein_id=OFQ19724.1;transl_table=11 KV814743.1 Genbank gene 284631 284888 . + . ID=gene-HMPREF2948_09860;Name=HMPREF2948_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09860 KV814743.1 Protein Homology CDS 284631 284888 . + 0 ID=cds-OFQ19725.1;Parent=gene-HMPREF2948_09860;Dbxref=NCBI_GP:OFQ19725.1;Name=OFQ19725.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005636841.1;locus_tag=HMPREF2948_09860;product=hypothetical protein;protein_id=OFQ19725.1;transl_table=11 KV814743.1 Genbank gene 284897 286177 . + . ID=gene-HMPREF2948_09865;Name=HMPREF2948_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09865 KV814743.1 Protein Homology CDS 284897 286177 . + 0 ID=cds-OFQ19726.1;Parent=gene-HMPREF2948_09865;Dbxref=NCBI_GP:OFQ19726.1;Name=OFQ19726.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005696637.1;locus_tag=HMPREF2948_09865;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=OFQ19726.1;transl_table=11 KV814743.1 Genbank gene 286234 286938 . - . ID=gene-HMPREF2948_09870;Name=HMPREF2948_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09870 KV814743.1 Protein Homology CDS 286234 286938 . - 0 ID=cds-OFQ19727.1;Parent=gene-HMPREF2948_09870;Dbxref=NCBI_GP:OFQ19727.1;Name=OFQ19727.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005697173.1;locus_tag=HMPREF2948_09870;product=YggS family pyridoxal phosphate enzyme;protein_id=OFQ19727.1;transl_table=11 KV814743.1 Genbank gene 287250 289697 . + . ID=gene-HMPREF2948_09875;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=HMPREF2948_09875 KV814743.1 Protein Homology CDS 287250 289697 . + 0 ID=cds-OFQ19728.1;Parent=gene-HMPREF2948_09875;Dbxref=NCBI_GP:OFQ19728.1;Name=OFQ19728.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;inference=EXISTENCE: similar to AA sequence:SwissProt:P44505.1;locus_tag=HMPREF2948_09875;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=OFQ19728.1;transl_table=11 KV814743.1 Genbank gene 289710 290654 . + . ID=gene-HMPREF2948_09880;Name=HMPREF2948_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09880 KV814743.1 Protein Homology CDS 289710 290654 . + 0 ID=cds-OFQ19729.1;Parent=gene-HMPREF2948_09880;Dbxref=NCBI_GP:OFQ19729.1;Name=OFQ19729.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005556096.1;locus_tag=HMPREF2948_09880;product=homoserine kinase;protein_id=OFQ19729.1;transl_table=11 KV814743.1 Genbank gene 290732 292006 . + . ID=gene-HMPREF2948_09885;Name=HMPREF2948_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09885 KV814743.1 Protein Homology CDS 290732 292006 . + 0 ID=cds-OFQ19730.1;Parent=gene-HMPREF2948_09885;Dbxref=NCBI_GP:OFQ19730.1;Name=OFQ19730.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_006253476.1;locus_tag=HMPREF2948_09885;product=threonine synthase;protein_id=OFQ19730.1;transl_table=11 KV814743.1 Genbank gene 292201 292425 . - . ID=gene-HMPREF2948_09890;Name=HMPREF2948_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09890 KV814743.1 GeneMarkS+ CDS 292201 292425 . - 0 ID=cds-OFQ19731.1;Parent=gene-HMPREF2948_09890;Dbxref=NCBI_GP:OFQ19731.1;Name=OFQ19731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09890;product=hypothetical protein;protein_id=OFQ19731.1;transl_table=11 KV814743.1 Genbank gene 292598 293308 . + . ID=gene-HMPREF2948_09895;Name=HMPREF2948_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09895 KV814743.1 Protein Homology CDS 292598 293308 . + 0 ID=cds-OFQ19732.1;Parent=gene-HMPREF2948_09895;Dbxref=NCBI_GP:OFQ19732.1;Name=OFQ19732.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005699254.1;locus_tag=HMPREF2948_09895;product=4'-phosphopantetheinyl transferase;protein_id=OFQ19732.1;transl_table=11 KV814743.1 Genbank gene 293437 294678 . + . ID=gene-HMPREF2948_09900;Name=HMPREF2948_09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09900 KV814743.1 Protein Homology CDS 293437 294678 . + 0 ID=cds-OFQ19733.1;Parent=gene-HMPREF2948_09900;Dbxref=NCBI_GP:OFQ19733.1;Name=OFQ19733.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005668135.1;locus_tag=HMPREF2948_09900;product=protease modulator HflK;protein_id=OFQ19733.1;transl_table=11 KV814743.1 Genbank gene 294678 295565 . + . ID=gene-HMPREF2948_09905;Name=HMPREF2948_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09905 KV814743.1 Protein Homology CDS 294678 295565 . + 0 ID=cds-OFQ19734.1;Parent=gene-HMPREF2948_09905;Dbxref=NCBI_GP:OFQ19734.1;Name=OFQ19734.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_014064951.1;locus_tag=HMPREF2948_09905;product=protease modulator HflC;protein_id=OFQ19734.1;transl_table=11 KV814743.1 Genbank gene 296234 297547 . - . ID=gene-HMPREF2948_09910;Name=HMPREF2948_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09910 KV814743.1 Protein Homology CDS 296234 297547 . - 0 ID=cds-OFQ19735.1;Parent=gene-HMPREF2948_09910;Dbxref=NCBI_GP:OFQ19735.1;Name=OFQ19735.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:SwissProt:P44610.1;locus_tag=HMPREF2948_09910;product=metabolite transport protein;protein_id=OFQ19735.1;transl_table=11 KV814743.1 Genbank gene 297531 298211 . - . ID=gene-HMPREF2948_09915;Name=HMPREF2948_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09915 KV814743.1 Protein Homology CDS 297531 298211 . - 0 ID=cds-OFQ19736.1;Parent=gene-HMPREF2948_09915;Dbxref=NCBI_GP:OFQ19736.1;Name=OFQ19736.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693747.1;locus_tag=HMPREF2948_09915;product=thiamine phosphate synthase;protein_id=OFQ19736.1;transl_table=11 KV814743.1 Genbank gene 298222 299031 . - . ID=gene-HMPREF2948_09920;Name=HMPREF2948_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09920 KV814743.1 Protein Homology CDS 298222 299031 . - 0 ID=cds-OFQ19737.1;Parent=gene-HMPREF2948_09920;Dbxref=NCBI_GP:OFQ19737.1;Name=OFQ19737.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693748.1;locus_tag=HMPREF2948_09920;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=OFQ19737.1;transl_table=11 KV814743.1 Genbank gene 299024 299818 . - . ID=gene-HMPREF2948_09925;Name=HMPREF2948_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09925 KV814743.1 Protein Homology CDS 299024 299818 . - 0 ID=cds-OFQ19738.1;Parent=gene-HMPREF2948_09925;Dbxref=NCBI_GP:OFQ19738.1;Name=OFQ19738.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005647061.1;locus_tag=HMPREF2948_09925;product=hydroxyethylthiazole kinase;protein_id=OFQ19738.1;transl_table=11 KV814743.1 Genbank gene 299834 300481 . - . ID=gene-HMPREF2948_09930;Name=HMPREF2948_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09930 KV814743.1 Protein Homology CDS 299834 300481 . - 0 ID=cds-OFQ19739.1;Parent=gene-HMPREF2948_09930;Dbxref=NCBI_GP:OFQ19739.1;Name=OFQ19739.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005662665.1;locus_tag=HMPREF2948_09930;product=thiaminase II;protein_id=OFQ19739.1;transl_table=11 KV814743.1 Genbank gene 300491 301435 . - . ID=gene-HMPREF2948_09935;Name=HMPREF2948_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09935 KV814743.1 Protein Homology CDS 300491 301435 . - 0 ID=cds-OFQ19740.1;Parent=gene-HMPREF2948_09935;Dbxref=NCBI_GP:OFQ19740.1;Name=OFQ19740.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005693803.1;locus_tag=HMPREF2948_09935;product=thiamine biosynthesis protein;protein_id=OFQ19740.1;transl_table=11 KV814743.1 Genbank gene 301461 302198 . - . ID=gene-HMPREF2948_09940;Name=HMPREF2948_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09940 KV814743.1 Protein Homology CDS 301461 302198 . - 0 ID=cds-OFQ19741.1;Parent=gene-HMPREF2948_09940;Dbxref=NCBI_GP:OFQ19741.1;Name=OFQ19741.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_005708452.1;locus_tag=HMPREF2948_09940;product=ABC transporter permease;protein_id=OFQ19741.1;transl_table=11 KV814743.1 Genbank gene 302195 302920 . - . ID=gene-HMPREF2948_09945;Name=HMPREF2948_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=HMPREF2948_09945 KV814743.1 Protein Homology CDS 302195 302920 . - 0 ID=cds-OFQ19742.1;Parent=gene-HMPREF2948_09945;Dbxref=NCBI_GP:OFQ19742.1;Name=OFQ19742.1;gbkey=CDS;inference=EXISTENCE: similar to AA sequence:RefSeq:WP_009500901.1;locus_tag=HMPREF2948_09945;product=phosphonate ABC transporter ATP-binding protein;protein_id=OFQ19742.1;transl_table=11 KV814743.1 cmsearch binding_site 302995 303086 . - . ID=id-KV814743.1:302995..303086;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.1 KV814743.1 Genbank pseudogene 303431 305508 . - . ID=gene-HMPREF2948_09950;Name=HMPREF2948_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=HMPREF2948_09950;pseudo=true KV814743.1 GeneMarkS+ CDS 303431 305508 . - 2 ID=cds-HMPREF2948_09950;Parent=gene-HMPREF2948_09950;Note=incomplete%3B too short partial abutting assembly gap%3B missing start;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS+;locus_tag=HMPREF2948_09950;product=hypothetical protein;pseudo=true;transl_table=11 ###